BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047221
(509 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359495268|ref|XP_003634944.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Vitis vinifera]
Length = 582
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 218/383 (56%), Positives = 277/383 (72%)
Query: 126 PYATPKQVSEIIELLRSGDSETESKLLSMSVSLSNASVIEILRVLNSEKVSALCFLKYMR 185
P +PK++SEII+++RS + + E KL M++ LS ASV EI RVLN E++SA+ F +++
Sbjct: 199 PNMSPKRISEIIKVIRSDEIDMEVKLNLMNLRLSVASVTEIFRVLNLERLSAMRFFEWIS 258
Query: 186 EIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKAL 245
+N DICSL+IDNCGRL DYETMR LL DFN +VCL KAFGF+PV SKA
Sbjct: 259 HSRSGLSRNYDICSLIIDNCGRLGDYETMRCLLKDFNSKRVCLTSKAFGFVPVFTLSKAS 318
Query: 246 TKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKE 305
+ +++EVL+ VGG C SG+ LIEMFSV G +EMAK+V++ TERK SYYNIL++E
Sbjct: 319 IMDFVRKLIEVLDDVGGVCRRSGLFGLIEMFSVSGSFEMAKFVMEITERKTSYYNILVRE 378
Query: 306 MCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPD 365
MCR+C+FK RDLL EMR GC P TYNY+L LCKN +D +AC +LEEM C PD
Sbjct: 379 MCRKCNFKEARDLLDEMRLFGCRPNAKTYNYLLSSLCKNNRDDEACNVLEEMQEAGCPPD 438
Query: 366 AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV 425
A+T+EIFI Y+ R+GK D A F +QMV RGL+PRL THAAFIKGYF RYE+AY+YVV
Sbjct: 439 ALTFEIFIYYTYRLGKLDFAIKFLDQMVSRGLEPRLTTHAAFIKGYFHSRRYEEAYEYVV 498
Query: 426 LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSH 485
S YK SNM+YSLLASLH +N N + A+ +L EM++ GL+PN SVY+RVL+HL S
Sbjct: 499 DSGVTYKWPSNMIYSLLASLHQRNGNLISAQKILIEMIEKGLKPNFSVYKRVLEHLDKSG 558
Query: 486 QEHMAKCLSSRYSSLSLGSSVEA 508
+E +A L SR+SSLS SS E
Sbjct: 559 REDLAGDLRSRFSSLSFQSSTET 581
>gi|255569134|ref|XP_002525536.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535215|gb|EEF36894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 430
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/377 (54%), Positives = 267/377 (70%), Gaps = 2/377 (0%)
Query: 126 PYATPKQVSEIIELLRSGDSETESKLLSMSVSLSNASVIEILRVLNSEKVSALCFLKYMR 185
P AT KQVS II LL + D+E E+KL S+ V LS SV + +VLN EK SAL F ++R
Sbjct: 54 PKATRKQVSVIIGLLITEDNELETKLNSLGVRLSIGSVRWVFQVLNREKKSALQFFHWIR 113
Query: 186 EIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKAL 245
PE NSDICSLVIDNCG LDDY+ MR LL+ F++ ++ L +KAF +L + S + L
Sbjct: 114 RWQPELEGNSDICSLVIDNCGHLDDYKAMRCLLDGFSLQRLFLTKKAFEYLQLTSSKEEL 173
Query: 246 TKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKE 305
KK VV++L ++GG+ +GV +LIEMFS LG ++MAK+VI+KT RK+SYYN+LI+E
Sbjct: 174 LKKATQNVVDILQEIGGTSYGTGVPSLIEMFSDLGSFDMAKFVIEKTGRKLSYYNVLIRE 233
Query: 306 MCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPD 365
+CRR DFK RDL+ E+ + GC P TYNY++ L KNG++ADACE+ +EM +C PD
Sbjct: 234 LCRRGDFKAARDLMDEIGKEGCNPSAHTYNYIISSLLKNGKNADACEVFQEMQDNDCPPD 293
Query: 366 AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV 425
A+T+EIFI SC GK D AF FF+ MV RGL+PRL THAAFIKG+F +YE AYKYVV
Sbjct: 294 ALTFEIFIYNSCNEGKLDNAFEFFDDMVARGLEPRLLTHAAFIKGFFNSQQYEKAYKYVV 353
Query: 426 LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSH 485
S DKY SSN+ YSLLA+LH K N V A+N+LSEM+K GLRP+ +V+ +V KHL S
Sbjct: 354 GSDDKY--SSNVNYSLLANLHQKQGNLVDAENILSEMIKKGLRPHFNVFMKVKKHLMKSG 411
Query: 486 QEHMAKCLSSRYSSLSL 502
E +A L ++ L +
Sbjct: 412 NEELATSLQKKFLQLEV 428
>gi|224146290|ref|XP_002325952.1| predicted protein [Populus trichocarpa]
gi|222862827|gb|EEF00334.1| predicted protein [Populus trichocarpa]
Length = 432
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 218/420 (51%), Positives = 284/420 (67%), Gaps = 14/420 (3%)
Query: 88 HSSQ--NLYF--SNCNGSCRSQISKLGLLTSRCISSFAMVNG---PYATPKQVSEIIELL 140
H+SQ NLYF S+ +G R G TS M G P A KQV+ II+L+
Sbjct: 16 HNSQSLNLYFFKSSIHGYLR------GYKTSSFDVYKEMGTGRVRPKAMQKQVAYIIDLI 69
Query: 141 RSGDSETESKLLSMSVSLSNASVIEILRVLNSEKVSALCFLKYMREIMPEFYKNSDICSL 200
+ + + E KL S+SV LS ASV + VLNSEKVSAL F +++R PE NSDICSL
Sbjct: 70 KRDEYDLEYKLGSLSVKLSIASVTLVFHVLNSEKVSALRFFRWIRHWQPELRCNSDICSL 129
Query: 201 VIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQV 260
VIDNCGRLDDY+ MR LLN+FN Q+CL +KAF FL V+ + + RV+ +L +V
Sbjct: 130 VIDNCGRLDDYDAMRSLLNEFNENQLCLTKKAFEFLHVMNVTNESLVESTQRVIVLLLEV 189
Query: 261 GGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLV 320
GSC V +LIEMFSVLG ++M ++V+KKTERK+SYY I I+EMCRRCDFKG RD+
Sbjct: 190 RGSCY-GWVSSLIEMFSVLGSFDMVEFVMKKTERKISYYYIFIREMCRRCDFKGVRDIQD 248
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
EMR+ G E YNY++ L KNG+ ADAC++L EM ++C PDA+T+EIFI Y C G
Sbjct: 249 EMRKEGFELNARIYNYLISCLLKNGEYADACKVLTEMQDKDCPPDALTFEIFIYYCCNNG 308
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
K ++A ++F+++V RGL+PRL+THAAFIKG+F +YE+AYKYVV S KYK +S M YS
Sbjct: 309 KTEIACHYFDEIVARGLEPRLSTHAAFIKGFFNSEQYEEAYKYVVDSDKKYKCTSCMNYS 368
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSL 500
LLA LH K N V+A+N+LSEM+K GLRP VY +V L+ S +E +A L ++ L
Sbjct: 369 LLARLHQKRGNLVIAQNILSEMIKKGLRPYFKVYMKVFNCLNKSGRETLATDLQEQFHQL 428
>gi|449447209|ref|XP_004141361.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
gi|449498723|ref|XP_004160616.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 494
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 191/452 (42%), Positives = 277/452 (61%), Gaps = 19/452 (4%)
Query: 72 SSIGSSSFCHLTHPSCHSSQNLYFSNCNG---------------SCRSQISKLGLLTSRC 116
S+ GSS C+ T S S F CNG SCR+ S L +C
Sbjct: 46 SAAGSSLICNSTSQSVPSL--CLFERCNGGTSDLNLALFRHHYRSCRA-FSSFSLEKRQC 102
Query: 117 ISSFAMVNGPYATPKQVSEIIELLRSGDSETESKLLSMSVSLSNASVIEILRVLNSEKVS 176
+ V+ T Q+S II ++R + ESKL S +V L+N V +IL +LN K+S
Sbjct: 103 GTGNLNVSKRNVTSNQLSNIINIIRENQEDLESKLDSPNVRLTNVLVGQILEMLNKHKIS 162
Query: 177 ALCFLKYMREIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFL 236
A F ++ +F NSD+ SL+IDN GRLDDYE + +L +F + + LN KAFGFL
Sbjct: 163 ASRFFNWVSVQSCKFPCNSDVYSLLIDNFGRLDDYEGILPVLIEFGLKGIELNHKAFGFL 222
Query: 237 PVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKV 296
+ +S++ K + ++V++LN+ GG+C +SG+ ALIEMF LG + MAK+VI+ TE++
Sbjct: 223 -LPLSNEHSMKLSVVKLVKLLNEAGGTCRLSGIMALIEMFCSLGSFGMAKFVIEITEKRS 281
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
S+Y I+++E C++ DF+G R L EMRQVGC P NY+L LCKN + +A LLEE
Sbjct: 282 SFYYIIVREKCKQKDFEGARCTLDEMRQVGCIPDAGILNYLLSSLCKNDKFGEAHNLLEE 341
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
ML +NC P+++T+EI I + C++G + A + + MV GL PRL+THAAF+K YF R
Sbjct: 342 MLEQNCSPNSLTFEIIICHLCKIGNIESALGYLDMMVAGGLMPRLSTHAAFVKSYFSSQR 401
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
YE+AY+Y V S+ KY ++ N YSLLA+LH+K N V A+ +LSE+M GL+P+ VY R
Sbjct: 402 YEEAYQYAVDSSLKYVTTQNATYSLLATLHEKRGNLVDAQKILSELMDAGLKPHFHVYTR 461
Query: 477 VLKHLHTSHQEHMAKCLSSRYSSLSLGSSVEA 508
+LK L + +A L + S++SL S ++
Sbjct: 462 LLKKLQVQGRGDLANDLKRKISNVSLQSGIQT 493
>gi|356573667|ref|XP_003554979.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Glycine max]
Length = 390
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 162/375 (43%), Positives = 241/375 (64%)
Query: 126 PYATPKQVSEIIELLRSGDSETESKLLSMSVSLSNASVIEILRVLNSEKVSALCFLKYMR 185
P+AT +Q +II L+R E SKL SM+VSLS+ASV++I ++L SEKVSAL F +++
Sbjct: 13 PHATSEQFYQIIALIREDVDELGSKLNSMNVSLSDASVVDIFQILASEKVSALQFFDFLK 72
Query: 186 EIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKAL 245
PE + DI SL I+NCG L +YE M +L+ F+ +V L KAFGFL L KA
Sbjct: 73 GSDPELCCDPDIGSLFINNCGLLGNYEAMVPVLSGFSHRRVFLGMKAFGFLLDLGLDKAS 132
Query: 246 TKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKE 305
+ + + +V+ V N+VGG GV+ LIEMF + G +E+A++VI+ RKV +Y++L++
Sbjct: 133 SMECVRKVMAVFNKVGGMYQSCGVQLLIEMFGLSGSFEIAEFVIRTAGRKVKHYHVLMRI 192
Query: 306 MCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPD 365
+C+ D K DL+ EM++ GC+ TYN +L LCKNG+ +A +LLE M +
Sbjct: 193 LCKSGDCKRVSDLVKEMKRSGCDMDVSTYNLLLSCLCKNGKIDEAWQLLEAMEKNYGLTN 252
Query: 366 AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV 425
A +++I I + C+ +FD ++M +G++P + THAA IK YF +YE+A++YV+
Sbjct: 253 AHSFDILINFLCKRRQFDSVLKLLDKMFLKGIEPSILTHAAIIKSYFESGKYEEAHEYVI 312
Query: 426 LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSH 485
SA++ SSN Y LLA+L KN N ++A VLSEMM GL+PN SVY+++ KHL
Sbjct: 313 GSANRLSYSSNANYGLLATLQLKNGNVLLACKVLSEMMDKGLKPNFSVYKKIRKHLEKKD 372
Query: 486 QEHMAKCLSSRYSSL 500
++ ++ L RYSSL
Sbjct: 373 EKDLSLELLRRYSSL 387
>gi|358345964|ref|XP_003637044.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|358346621|ref|XP_003637365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502979|gb|AES84182.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503300|gb|AES84503.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 448
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 157/377 (41%), Positives = 237/377 (62%), Gaps = 1/377 (0%)
Query: 124 NGPYATPKQVSEIIELLRSGDSETESKLLSMSVSLSNASVIEILRVLNSEKVSALCFLKY 183
N PYAT KQVS+II ++ GD+ E +L M+VSLS ASVI I L S++VSAL F +
Sbjct: 70 NKPYATSKQVSQIIAMVIEGDNGLEHRLNMMNVSLSMASVIYIFDALASQRVSALMFFHW 129
Query: 184 MREIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSK 243
+ PE + +I V+DNCG L D++ M +L DFN +VCL +AF FL VL +
Sbjct: 130 LNVSHPELCCDPEIGCCVVDNCGLLRDFDAMVPILRDFNSKRVCLGRRAFRFLVVLWLDE 189
Query: 244 ALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILI 303
++ I R+V VL +VGG C SGV+ LIE+ S G++++A++VI + R V YN L+
Sbjct: 190 D-SRMDIVRIVNVLKEVGGVCQSSGVKVLIELLSFSGIFDVAEFVIGEAGRNVDRYNFLL 248
Query: 304 KEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH 363
+ +C+R D++ DL+ +M+++G EP TYN ++ L K G A+AC++LE M N
Sbjct: 249 RMICKRGDYERVVDLVEKMKKIGVEPNGSTYNLLISCLFKIGNFAEACQVLETMENENGL 308
Query: 364 PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY 423
T++ I C+ G+ D+A F ++M +G++P THAA IK YF +Y++A++Y
Sbjct: 309 SKEFTFDTIIRLLCKHGQIDLALKFIDKMTLKGVEPCSLTHAAVIKCYFELGKYDEAHEY 368
Query: 424 VVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHT 483
VV+ A K SSN Y+LLASLH K + ++++ +L EMM GL+PN SVY ++ K+
Sbjct: 369 VVVCAGKNSYSSNENYTLLASLHFKKGSVLLSQRILHEMMDKGLKPNYSVYMKIRKYFEK 428
Query: 484 SHQEHMAKCLSSRYSSL 500
++ ++ LS RY+SL
Sbjct: 429 KNKTDLSLELSRRYTSL 445
>gi|293332843|ref|NP_001167893.1| uncharacterized protein LOC100381604 [Zea mays]
gi|223944699|gb|ACN26433.1| unknown [Zea mays]
gi|414864420|tpg|DAA42977.1| TPA: hypothetical protein ZEAMMB73_690405 [Zea mays]
Length = 430
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 142/377 (37%), Positives = 211/377 (55%), Gaps = 5/377 (1%)
Query: 136 IIELLRSGDSETESKLLSM-SVSLSNASVIEILRVLNSEKVSALCFLKYMREIMPEFYKN 194
I+ L+ +G E+ L + S LS+ V +LR L V A F + + F
Sbjct: 45 IVCLVVAGGGGLEADLDRLFSAVLSHGLVSSVLRALTDRGVPAERFFAWASSLGRGFSPG 104
Query: 195 SDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFL-PVLISSKALTKKGIWR- 252
+L+++N GRLDDY M + L + ++ L ++AF FL P SS++ + + R
Sbjct: 105 PRAYNLLVENAGRLDDYGAMSRALALMSERRLSLTDRAFAFLAPSSGSSRSGSVEDAARA 164
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDF 312
V+ L+ VGG C SGV +L++ + +G ++ A VI++T RKV YYN+L+ C+ DF
Sbjct: 165 VLRALDGVGGPCRASGVFSLVKALASIGEFDAAVLVIEETARKVRYYNVLVAAKCKAGDF 224
Query: 313 KGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM--LGRNCHPDAITYE 370
G R++ EMR+ G +P T+NY+LG L K G+ A+AC L+E M L R+ P ++TYE
Sbjct: 225 VGAREVFDEMRRSGSDPDANTWNYLLGCLLKKGRLAEACGLVEAMERLKRSEIPSSLTYE 284
Query: 371 IFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADK 430
I ++C+ GK D A +QM L PR+ H+AFIKGYF R EDA KYV + +
Sbjct: 285 ILTYHACKAGKMDSAMQILDQMFSENLTPRITIHSAFIKGYFYAGRIEDACKYVSDMSTR 344
Query: 431 YKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
+ S N YSLLA L K+ + A VL E+M+ GLRP+ S Y +V K LH + ++A
Sbjct: 345 DRHSVNRNYSLLAKLLWKSGRTIDAGRVLYELMEKGLRPDHSAYVKVAKDLHKMGKGNLA 404
Query: 491 KCLSSRYSSLSLGSSVE 507
L + S+ S E
Sbjct: 405 CELKMMFQRFSVNSRSE 421
>gi|358346864|ref|XP_003637484.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503419|gb|AES84622.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 327
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 131/340 (38%), Positives = 200/340 (58%), Gaps = 17/340 (5%)
Query: 161 ASVIEILRVLNSEKVSALCFLKYMREIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLND 220
ASVI I L S++VSAL F ++ PE + +I V+DNCG L D++ M +L D
Sbjct: 2 ASVIYIFDALASQRVSALMFFHWLNVSHPELCCDPEIGCCVVDNCGLLRDFDAMVPILRD 61
Query: 221 FNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLG 280
FN +VCL +AF FL VL + ++ I R+V VL +VGG C SGV+ LIE+ S G
Sbjct: 62 FNSKRVCLGRRAFRFLVVLWLDED-SRMDIVRIVNVLKEVGGVCQSSGVKVLIELLSFSG 120
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
++++A++VI + R V YN L++ +C+R D++ DL+ +M
Sbjct: 121 IFDVAEFVIGEAGRNVDRYNFLLRMICKRGDYERVVDLVEKM----------------NC 164
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
L K G A+AC++LE M N T++ I C+ G+ D+A F ++M +G++P
Sbjct: 165 LFKIGNFAEACQVLETMENENGLSKEFTFDTIIRLLCKHGQIDLALKFIDKMTLKGVEPC 224
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
THAA IK YF +Y++A++YVV+ A K SSN Y+LLASLH K + ++++ +L
Sbjct: 225 SLTHAAVIKCYFELGKYDEAHEYVVVCAGKNSYSSNENYTLLASLHFKKGSVLLSQRILH 284
Query: 461 EMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSL 500
EMM GL+PN SVY ++ K+ ++ ++ LS RY+SL
Sbjct: 285 EMMDKGLKPNYSVYMKIRKYFEKKNKTDLSLELSRRYTSL 324
>gi|242042461|ref|XP_002468625.1| hypothetical protein SORBIDRAFT_01g049260 [Sorghum bicolor]
gi|241922479|gb|EER95623.1| hypothetical protein SORBIDRAFT_01g049260 [Sorghum bicolor]
Length = 422
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 136/372 (36%), Positives = 199/372 (53%), Gaps = 5/372 (1%)
Query: 136 IIELLRSGDSETESKLLSM-SVSLSNASVIEILRVLNSEKVSALCFLKYMREIMPEFYKN 194
I+ L+ +G E+ L + + +LS+ V LR L V A F + + F
Sbjct: 45 IVRLVAAGGGGLEADLDRLFAATLSHGLVSSALRALTDSGVPAERFFAWASSLGRGFSPG 104
Query: 195 SDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKAL--TKKGIWR 252
+L+++N GRL D M + L + + L ++AF FL + S +
Sbjct: 105 PRAHNLLVENTGRLGDCGAMSRALALMSERMLPLTDRAFAFLALSSGSSRSGSVEDSTTS 164
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDF 312
V+ L+ VGG C SGV +L++ + +G ++ A VI++T RKV YYN+L+ C+ DF
Sbjct: 165 VLRALDGVGGPCRASGVFSLVKALASIGEFDAAVSVIEETTRKVRYYNVLVAAKCKAGDF 224
Query: 313 KGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH--PDAITYE 370
G R++ EMR+ G +P T+NY+LG L KNG+ A+AC L+E M C P+++TYE
Sbjct: 225 VGAREVFDEMRKSGSDPDANTWNYLLGCLLKNGRLAEACGLVEAMERLKCSEIPNSLTYE 284
Query: 371 IFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADK 430
I ++C+ GK D A NQM L PR+ H+AFIKGYF R EDA KYV + +
Sbjct: 285 ILTYHACKAGKMDSAMQILNQMFSENLTPRITIHSAFIKGYFYAGRIEDACKYVNDMSTR 344
Query: 431 YKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
+ S N YSLLA L K+ V A VL E+M GLRP+ S Y +V K LH + +A
Sbjct: 345 DRHSVNRNYSLLAKLLRKSGRTVDAGRVLYELMDKGLRPDHSAYVKVAKDLHKMGRGDLA 404
Query: 491 KCLSSRYSSLSL 502
L + S+
Sbjct: 405 SELKMMFQRFSV 416
>gi|115450361|ref|NP_001048781.1| Os03g0119700 [Oryza sativa Japonica Group]
gi|113547252|dbj|BAF10695.1| Os03g0119700, partial [Oryza sativa Japonica Group]
Length = 436
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 126/351 (35%), Positives = 194/351 (55%), Gaps = 9/351 (2%)
Query: 136 IIELLRSGDSETESKLLSMSVSLSNASVIEILRVLNSEKVSALCFLKYMREIMPEFYKNS 195
I+ L+ +G E+ L + +LS+ V LR L + A F ++ + F ++
Sbjct: 65 IVRLVAAGGRSLEADLDRLDPALSHPIVSATLRALTDRGLPAARFFDWL-ALRRGFSPSA 123
Query: 196 DICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVE 255
+L+++N G L DY M + + + +V L E+AF FL +S+ + ++
Sbjct: 124 HAHNLLVENAGSLADYRAMSRAMESMSTRRVPLTERAFAFLN---TSQGSARDTAIAILA 180
Query: 256 VLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGP 315
L++VGG C SGV +L++ + +G ++ A VI++T R YYN LI C+ DF G
Sbjct: 181 TLDEVGGPCRASGVFSLVKALASIGEFDAAMSVIQETARGARYYNALIAVKCKTGDFHGA 240
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH---PDAITYEIF 372
R++ EMR+ G P + ++NY+LG L KNG+ A+ACEL+E M R+ H P+++TYEI
Sbjct: 241 REVFDEMRRSGFGPNSNSWNYLLGCLLKNGRVAEACELVEAM-ERSEHNDIPNSLTYEIL 299
Query: 373 IVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYK 432
++C+ G+ D A +QM L PR+ H AFIKGY R +DA +YV + + +
Sbjct: 300 AYHACKAGRMDSAMRILDQMFLEKLTPRITIHTAFIKGYLYAGRIDDACRYVSAMSTRDR 359
Query: 433 SSSNMLYSLLASLHDKNNNPVMAKNVLSEMM-KNGLRPNVSVYRRVLKHLH 482
S N YSLLA L K V A +L E+M K L P+ S Y RV+K LH
Sbjct: 360 RSVNRNYSLLAKLLCKAGMIVDAGRILYELMEKEALLPDHSAYIRVIKDLH 410
>gi|108705884|gb|ABF93679.1| expressed protein [Oryza sativa Japonica Group]
gi|215740500|dbj|BAG97156.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 424
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 128/363 (35%), Positives = 199/363 (54%), Gaps = 9/363 (2%)
Query: 136 IIELLRSGDSETESKLLSMSVSLSNASVIEILRVLNSEKVSALCFLKYMREIMPEFYKNS 195
I+ L+ +G E+ L + +LS+ V LR L + A F ++ + F ++
Sbjct: 53 IVRLVAAGGRSLEADLDRLDPALSHPIVSATLRALTDRGLPAARFFDWL-ALRRGFSPSA 111
Query: 196 DICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVE 255
+L+++N G L DY M + + + +V L E+AF FL +S+ + ++
Sbjct: 112 HAHNLLVENAGSLADYRAMSRAMESMSTRRVPLTERAFAFLN---TSQGSARDTAIAILA 168
Query: 256 VLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGP 315
L++VGG C SGV +L++ + +G ++ A VI++T R YYN LI C+ DF G
Sbjct: 169 TLDEVGGPCRASGVFSLVKALASIGEFDAAMSVIQETARGARYYNALIAVKCKTGDFHGA 228
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH---PDAITYEIF 372
R++ EMR+ G P + ++NY+LG L KNG+ A+ACEL+E M R+ H P+++TYEI
Sbjct: 229 REVFDEMRRSGFGPNSNSWNYLLGCLLKNGRVAEACELVEAM-ERSEHNDIPNSLTYEIL 287
Query: 373 IVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYK 432
++C+ G+ D A +QM L PR+ H AFIKGY R +DA +YV + + +
Sbjct: 288 AYHACKAGRMDSAMRILDQMFLEKLTPRITIHTAFIKGYLYAGRIDDACRYVSAMSTRDR 347
Query: 433 SSSNMLYSLLASLHDKNNNPVMAKNVLSEMM-KNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
S N YSLLA L K V A +L E+M K L P+ S Y RV+K LH + +A
Sbjct: 348 RSVNRNYSLLAKLLCKAGMIVDAGRILYELMEKEALLPDHSAYIRVIKDLHKIGKGDLAA 407
Query: 492 CLS 494
L+
Sbjct: 408 ELN 410
>gi|222624094|gb|EEE58226.1| hypothetical protein OsJ_09197 [Oryza sativa Japonica Group]
Length = 424
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 127/363 (34%), Positives = 198/363 (54%), Gaps = 9/363 (2%)
Query: 136 IIELLRSGDSETESKLLSMSVSLSNASVIEILRVLNSEKVSALCFLKYMREIMPEFYKNS 195
I+ L+ +G E+ L + +L + V LR L + A F ++ + F ++
Sbjct: 53 IVRLVAAGGRSLEADLDRLDPALFHPIVSATLRALTDRGLPAARFFDWL-ALRRGFSPSA 111
Query: 196 DICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVE 255
+L+++N G L DY M + + + +V L E+AF FL +S+ + ++
Sbjct: 112 HAHNLLVENAGSLADYRAMSRAMESMSTRRVPLTERAFAFLN---TSQGSARDTAIAILA 168
Query: 256 VLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGP 315
L++VGG C SGV +L++ + +G ++ A VI++T R YYN LI C+ DF G
Sbjct: 169 TLDEVGGPCRASGVFSLVKALASIGEFDAAMSVIQETARGARYYNALIAVKCKTGDFHGA 228
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH---PDAITYEIF 372
R++ EMR+ G P + ++NY+LG L KNG+ A+ACEL+E M R+ H P+++TYEI
Sbjct: 229 REVFDEMRRSGFGPNSNSWNYLLGCLLKNGRVAEACELVEAM-ERSEHNDIPNSLTYEIL 287
Query: 373 IVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYK 432
++C+ G+ D A +QM L PR+ H AFIKGY R +DA +YV + + +
Sbjct: 288 AYHACKAGRMDSAMRILDQMFLEKLTPRITIHTAFIKGYLYAGRIDDACRYVSAMSTRDR 347
Query: 433 SSSNMLYSLLASLHDKNNNPVMAKNVLSEMM-KNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
S N YSLLA L K V A +L E+M K L P+ S Y RV+K LH + +A
Sbjct: 348 RSVNRNYSLLAKLLCKAGMIVDAGRILYELMEKEALLPDHSAYIRVIKDLHKIGKGDLAA 407
Query: 492 CLS 494
L+
Sbjct: 408 ELN 410
>gi|27452908|gb|AAO15292.1| Putative callose synthase [Oryza sativa Japonica Group]
Length = 2055
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 130/371 (35%), Positives = 202/371 (54%), Gaps = 9/371 (2%)
Query: 136 IIELLRSGDSETESKLLSMSVSLSNASVIEILRVLNSEKVSALCFLKYMREIMPEFYKNS 195
I+ L+ +G E+ L + +LS+ V LR L + A F ++ + F ++
Sbjct: 1684 IVRLVAAGGRSLEADLDRLDPALSHPIVSATLRALTDRGLPAARFFDWL-ALRRGFSPSA 1742
Query: 196 DICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVE 255
+L+++N G L DY M + + + +V L E+AF FL +S+ + ++
Sbjct: 1743 HAHNLLVENAGSLADYRAMSRAMESMSTRRVPLTERAFAFLN---TSQGSARDTAIAILA 1799
Query: 256 VLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGP 315
L++VGG C SGV +L++ + +G ++ A VI++T R YYN LI C+ DF G
Sbjct: 1800 TLDEVGGPCRASGVFSLVKALASIGEFDAAMSVIQETARGARYYNALIAVKCKTGDFHGA 1859
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH---PDAITYEIF 372
R++ EMR+ G P + ++NY+LG L KNG+ A+ACEL+E M R+ H P+++TYEI
Sbjct: 1860 REVFDEMRRSGFGPNSNSWNYLLGCLLKNGRVAEACELVEAM-ERSEHNDIPNSLTYEIL 1918
Query: 373 IVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYK 432
++C+ G+ D A +QM L PR+ H AFIKGY R +DA +YV + + +
Sbjct: 1919 AYHACKAGRMDSAMRILDQMFLEKLTPRITIHTAFIKGYLYAGRIDDACRYVSAMSTRDR 1978
Query: 433 SSSNMLYSLLASLHDKNNNPVMAKNVLSEMM-KNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
S N YSLLA L K V A +L E+M K L P+ S Y RV+K LH + +A
Sbjct: 1979 RSVNRNYSLLAKLLCKAGMIVDAGRILYELMEKEALLPDHSAYIRVIKDLHKIGKGDLAA 2038
Query: 492 CLSSRYSSLSL 502
L+ LS+
Sbjct: 2039 ELNLILQKLSV 2049
>gi|218191977|gb|EEC74404.1| hypothetical protein OsI_09760 [Oryza sativa Indica Group]
Length = 407
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 119/351 (33%), Positives = 184/351 (52%), Gaps = 26/351 (7%)
Query: 136 IIELLRSGDSETESKLLSMSVSLSNASVIEILRVLNSEKVSALCFLKYMREIMPEFYKNS 195
I+ L+ +G E+ L + +LS+ V LR L + A F ++ + F ++
Sbjct: 53 IVRLVAAGGRSLEADLDRLDPALSHPIVSATLRALTDRGLPAARFFDWL-ALRRGFSPSA 111
Query: 196 DICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVE 255
+L+++N G L DY M + + +S++ I ++
Sbjct: 112 HAHNLLVENAGSLADYRAMSRAMES-------------------MSTRRRQDTAIA-ILA 151
Query: 256 VLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGP 315
L++VGG C SGV +L++ + + ++ A VI++T R YYN LI C+ DF G
Sbjct: 152 TLDEVGGPCRASGVFSLVKALASICEFDAAMSVIQETARGARYYNALIAVKCKTGDFHGA 211
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH---PDAITYEIF 372
R++ EMR+ G P + ++NY+LG L KNG+ A+ACEL+E M R+ H P+++TYEI
Sbjct: 212 REVFDEMRRSGFGPNSNSWNYLLGCLLKNGRVAEACELVEAM-ERSEHNDIPNSLTYEIL 270
Query: 373 IVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYK 432
++C+ G+ D A +QM L PR+ H AFIKGY R +DA +YV + + +
Sbjct: 271 AYHACKAGRMDSAMRILDQMFLEKLTPRITIHTAFIKGYLYAGRIDDACRYVSAMSTRDR 330
Query: 433 SSSNMLYSLLASLHDKNNNPVMAKNVLSEMM-KNGLRPNVSVYRRVLKHLH 482
S N YSLLA L K V A +L E+M K L P+ S Y RV+K LH
Sbjct: 331 RSVNRNYSLLAKLLCKAGMIVDAGRILYELMEKEALLPDHSAYIRVIKDLH 381
>gi|242054943|ref|XP_002456617.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
gi|241928592|gb|EES01737.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
Length = 410
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 110/235 (46%), Gaps = 5/235 (2%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEM 306
RV +V+ ++G + ALI + V G EM ++ + R + YN L+ E
Sbjct: 59 RVFDVMPRLGVTPNEVTYTALIHGYFVRGQREMGFALVGEMRRGGVEPNLYTYNCLVGEW 118
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
CR +FK R L EM G ++YN ++ LC++G+ DA +L E M HP
Sbjct: 119 CRTGEFKSARLLFDEMPLKGVVRNVVSYNILIAGLCRHGKLKDAAQLFEAMRREGIHPSM 178
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
+T+ + I + GK A +FFNQM GLQP + T+ I G+ A +
Sbjct: 179 VTFNLLIDGYGKAGKMSNALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSD 238
Query: 427 SADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
++ + + + Y++L K N A +LSEM K GL +V Y +L L
Sbjct: 239 MKERRLAPTKVTYTILIGAFAKENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHAL 293
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 85/221 (38%), Gaps = 35/221 (15%)
Query: 289 IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQ------------------------ 324
+K R V YNILI +CR K L MR+
Sbjct: 136 LKGVVRNVVSYNILIAGLCRHGKLKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMS 195
Query: 325 -----------VGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFI 373
G +P +TYN ++G C+ A A +M R P +TY I I
Sbjct: 196 NALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTILI 255
Query: 374 VYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKS 433
+ + D AF ++M K GL+ + ++ + + + A K K
Sbjct: 256 GAFAKENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDSKGVK 315
Query: 434 SSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+N+LY ++ + + + A ++ EM K+GL PNV+ Y
Sbjct: 316 PNNVLYDMMIYGYGREGSSYKALRLIMEMRKSGLIPNVASY 356
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 76/183 (41%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V+ L+ C+ D R + M ++G P +TY ++ GQ L+
Sbjct: 38 VAACTALVHGCCQSGDVAEARRVFDVMPRLGVTPNEVTYTALIHGYFVRGQREMGFALVG 97
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM P+ TY + CR G+F A F++M +G+ + ++ I G
Sbjct: 98 EMRRGGVEPNLYTYNCLVGEWCRTGEFKSARLLFDEMPLKGVVRNVVSYNILIAGLCRHG 157
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ +DA + + S + ++LL + K A + ++M GL+P+V Y
Sbjct: 158 KLKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQMKAAGLQPSVVTYN 217
Query: 476 RVL 478
++
Sbjct: 218 ELI 220
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 96/203 (47%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
+A+ + K V +NILI +CR+ D+L +M Q GC P +L+YN +L LCK
Sbjct: 340 LAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCK 399
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
+ + A E L+ M+ R C+PD +TY + C+ GK DVA NQ+ +G P L T
Sbjct: 400 DKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLIT 459
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
+ I G + +DA K + K + YS L + A ++
Sbjct: 460 YNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLE 519
Query: 464 KNGLRPNVSVYRRVLKHLHTSHQ 486
+ G++PN Y ++ L + Q
Sbjct: 520 EMGVKPNAITYNSIMLGLCKARQ 542
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 116/263 (44%), Gaps = 20/263 (7%)
Query: 234 GFLPVLISS----KALTKKG-IW---RVVEVLNQVGG-------SCLVSGVRALIEMFSV 278
G +P +I+ + L K G W RV+E+L G + L+SG E+ S
Sbjct: 140 GDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSA 199
Query: 279 LGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
L L + V YN +++ +C K ++L Q C P +TY ++
Sbjct: 200 LQLLDRMS-----VSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILI 254
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
CK A +LL+EM + C PD +TY + I C+ G+ D A F N M G Q
Sbjct: 255 EATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQ 314
Query: 399 PRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNV 458
P + TH ++ R+ DA K++ K S S + +++L + + A +V
Sbjct: 315 PNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDV 374
Query: 459 LSEMMKNGLRPNVSVYRRVLKHL 481
L +M ++G PN Y +L L
Sbjct: 375 LEKMPQHGCTPNSLSYNPLLHAL 397
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 85/192 (44%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K + V YN+LI +C+ L M GC+P +T+N +L +C G+ D
Sbjct: 276 KGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMD 335
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A + L EM+ + C P +T+ I I + CR G A + +M + G P ++ +
Sbjct: 336 AEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLH 395
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
+ E A +Y+ + + + Y+ L + K+ +A +L+++ G P
Sbjct: 396 ALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSP 455
Query: 470 NVSVYRRVLKHL 481
+ Y V+ L
Sbjct: 456 VLITYNTVIDGL 467
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 91/211 (43%), Gaps = 23/211 (10%)
Query: 230 EKAFGFLPVLISS-------------KALTKKGIWRV-VEVLNQVGG---SCLVSGVRAL 272
E+A +L +++S AL K G V VE+LNQ+G S ++ +
Sbjct: 404 ERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTV 463
Query: 273 IEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGC 327
I+ S +G + A ++ + + K + Y+ L+ + R ++ ++G
Sbjct: 464 IDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGV 523
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
+P +TYN ++ LCK Q A + L M+ R C P +Y I I G A
Sbjct: 524 KPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALE 583
Query: 388 FFNQMVKRGLQPRLATHAAFIKGYF-IFYRY 417
N++ RG+ + + +K F +FY Y
Sbjct: 584 LLNELCSRGVVKKSSAEQVVVKIPFNVFYFY 614
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 71/172 (41%), Gaps = 3/172 (1%)
Query: 303 IKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNC 362
++ + R + + L +M G P + ++ LCK G+ A ++E +
Sbjct: 117 LRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGA 176
Query: 363 HPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
PD ITY + I C+ G+ A ++M + P + T+ ++ + ++A +
Sbjct: 177 VPDVITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAME 233
Query: 423 YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + + Y++L K + A +L EM G +P+V Y
Sbjct: 234 VLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTY 285
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 133/290 (45%), Gaps = 27/290 (9%)
Query: 199 SLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISS----KALTKKGIWRVV 254
+++I+ R D + RQ+LN + Y GF P +S K L W V
Sbjct: 211 NVIINGMCREDRVDDARQILNRLSSY---------GFQPDTVSYTTVLKGLCAAKRWEDV 261
Query: 255 EVL--NQVGGSCLVSGVR--ALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKE 305
EVL V +C+ + V L+ F G+ E A V+ + + NI+I
Sbjct: 262 EVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINS 321
Query: 306 MCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPD 365
+C++ + L M GC P T++Y VL LC+ G+ DA ELL EM+ +NC P+
Sbjct: 322 ICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPN 381
Query: 366 AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV 425
+T+ FI C+ G D A QM + G + T+ A + G+ + R + A + +
Sbjct: 382 EVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALE--L 439
Query: 426 LSADKYKSSSNMLYSLLASL-HDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
++ + ++ +LL L H + + A +L+EMM+N NV +
Sbjct: 440 FNSLPCEPNTITYTTLLTGLCHAERLDA--AAELLAEMMQNDCPLNVVTF 487
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 132/301 (43%), Gaps = 25/301 (8%)
Query: 194 NSDICSLVIDNC---GRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGI 250
N+ +C++VI++ GR+DD + LN+ Y + + VL K L + G
Sbjct: 311 NTTLCNIVINSICKQGRVDD---AFEFLNNMGSYGC--SPDTISYTTVL---KGLCRAGR 362
Query: 251 WR-VVEVLNQ-VGGSCLVSGV--RALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNI 301
W E+LN+ V +C + V I + GL + A +I++ + YN
Sbjct: 363 WEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNA 422
Query: 302 LIKEMCRRCDFKGPRDLLVEM-RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGR 360
L+ C +G D +E+ + CEP T+TY +L LC + A ELL EM+
Sbjct: 423 LVNGFC----VQGRVDSALELFNSLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQN 478
Query: 361 NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
+C + +T+ + + + C+ G + A QM++ G P L T + G E+A
Sbjct: 479 DCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEA 538
Query: 421 YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKH 480
+ + K S + YS + + + + A + + G+RP +Y ++L
Sbjct: 539 LELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSA 598
Query: 481 L 481
L
Sbjct: 599 L 599
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 77/175 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI+ +C R LL +M + C+P +TY +L +CK+ A ++L+EM
Sbjct: 140 YTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMR 199
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C P+ +TY + I CR + D A N++ G QP ++ +KG R+E
Sbjct: 200 AKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWE 259
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
D + + + + +L + A VL M ++G N ++
Sbjct: 260 DVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTL 314
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 113/277 (40%), Gaps = 3/277 (1%)
Query: 207 RLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLV 266
R +E ++LLN+ NE F ++ K L + I ++E + + G S +
Sbjct: 359 RAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAIL-LIEQMPEYGCSVGI 417
Query: 267 SGVRALIEMFSVLGLYEMAKYVIKK--TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQ 324
AL+ F V G + A + E Y L+ +C +LL EM Q
Sbjct: 418 VTYNALVNGFCVQGRVDSALELFNSLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQ 477
Query: 325 VGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
C +T+N ++ C+ G +A EL+++M+ C P+ IT+ + +
Sbjct: 478 NDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEE 537
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLAS 444
A + +V +G+ T+++ + R E+A + D ++Y+ + S
Sbjct: 538 ALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILS 597
Query: 445 LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K A + + M+ N PN S Y +++ L
Sbjct: 598 ALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGL 634
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 3/124 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ CR R L+ M P TY ++ LC G+ DA LL++ML
Sbjct: 108 YNTLVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPLIRGLCDRGRVGDALSLLDDML 164
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R C P +TY + + C+ F A ++M +G P + T+ I G R +
Sbjct: 165 RRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVD 224
Query: 419 DAYK 422
DA +
Sbjct: 225 DARQ 228
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 86/216 (39%), Gaps = 35/216 (16%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
++ + V Y +L++ +C+ F +L EMR GC P +TYN ++ +C+ + D
Sbjct: 166 RECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDD 225
Query: 350 ACELLE-----------------------------------EMLGRNCHPDAITYEIFIV 374
A ++L EM+ NC P+ +T+++ +
Sbjct: 226 ARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVR 285
Query: 375 YSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSS 434
+ CR G + A ++M + G I R +DA++++ S
Sbjct: 286 FFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSP 345
Query: 435 SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
+ Y+ + + AK +L+EM++ PN
Sbjct: 346 DTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPN 381
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 63/159 (39%), Gaps = 3/159 (1%)
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
LC+ G+ +DA +L G D Y + CR G+ D A M + P
Sbjct: 80 LCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRLIASM---PVPPD 136
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
T+ I+G R DA + + S + Y++L K++ A VL
Sbjct: 137 AYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLD 196
Query: 461 EMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSS 499
EM G PN+ Y ++ + + A+ + +R SS
Sbjct: 197 EMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSS 235
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
++ +G P + YN +L LCK + A + M+ +C P+ TY I I R G
Sbjct: 580 VQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGL 639
Query: 382 FDVAFNFFNQMVKRGL 397
A +++ RG+
Sbjct: 640 LKEARYVLSELCSRGV 655
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 5/216 (2%)
Query: 271 ALIEMFSVLGLYEMAKYVIK-----KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI V G +E A + + + YN++IK C + + +M +
Sbjct: 382 ALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKA 441
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P +TYN ++ + K G +A LLE M G D TY I R GK + A
Sbjct: 442 GPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHA 501
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
F+ FN+MV+ G+ P + T+ A I GY + +DA + S+ Y+++ S
Sbjct: 502 FSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISG 561
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K N A+N +M+K GL PNV Y + L
Sbjct: 562 FSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGL 597
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 2/167 (1%)
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
RD+ +EM G P T+N ++ +LC G+ +A ++ + PD TY I+
Sbjct: 187 RDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIG 246
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
C+ G D+AF F++MVK G P T++A I G R E+A + DK +
Sbjct: 247 HCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPT 306
Query: 436 NMLYSL-LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y++ + SL D + A +L +M K G PNV Y ++ L
Sbjct: 307 VHAYTIPIVSLCDAGRS-CEAVKLLGKMKKRGCGPNVQTYTALISGL 352
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 84/182 (46%), Gaps = 4/182 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ LI +C + D+L EM G EP Y + LC G+ +A +LL +M
Sbjct: 275 YSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMK 334
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R C P+ TY I R GKF+VA +++M+ GL P T++A I ++ R+E
Sbjct: 335 KRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFE 394
Query: 419 DAYKYV--VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
A +LS D ++ Y+++ A + +M+K G PNV Y
Sbjct: 395 TALTIFEWMLSHDSLPNTET--YNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNI 452
Query: 477 VL 478
++
Sbjct: 453 II 454
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 157/383 (40%), Gaps = 43/383 (11%)
Query: 130 PKQVSEIIELLRSGDSETESKLLSMSVSLSNASVIEILRVLNSE---------------- 173
P+ VS+I +L S E S+L + L V+ +L N+
Sbjct: 48 PELVSKISIILSSPTWERSSELSHLIPKLKPHHVVNLLDTHNNTESVLRFFHWVSRTHFF 107
Query: 174 KVSALCFLKYMREIMPE--FYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEK 231
K CF+ + ++ + F ++ L+I +C + + + Q+L++ N
Sbjct: 108 KHDMSCFVSMLNRLVRDRLFVPADNVRILMIKSCRNEGEVKRVIQVLSEINT-TYDFGYT 166
Query: 232 AFGFLPVLISSKALTKKGIWRVV--EVLNQVGGSCLVSGVR-------ALIEMFSVLGLY 282
+ F +LI G+ R V E+LN SG+R A+I++ G
Sbjct: 167 LYSFSTLLIQLGKFDMDGLGRDVYIEMLN--------SGIRPNLFTFNAMIKILCNKGKV 218
Query: 283 EMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYV 337
+ A+ ++ Y LI C+ + ++ M + GC+P ++TY+ +
Sbjct: 219 QEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSAL 278
Query: 338 LGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
+ LC G+ +A ++LEEM+ + P Y I IV C G+ A +M KRG
Sbjct: 279 INGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGC 338
Query: 398 QPRLATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAK 456
P + T+ A I G ++E A Y + AD ++ +L+ L+ + A
Sbjct: 339 GPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFET-AL 397
Query: 457 NVLSEMMKNGLRPNVSVYRRVLK 479
+ M+ + PN Y ++K
Sbjct: 398 TIFEWMLSHDSLPNTETYNVIIK 420
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 79/183 (43%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y LI + R F+ + +M G P +TY+ ++ L G+ A + E
Sbjct: 342 VQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFE 401
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
ML + P+ TY + I C +G A F+QM+K G P + T+ I YF
Sbjct: 402 WMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQG 461
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+A + + + Y+ L S + A ++ +EM+++G+ PNV Y
Sbjct: 462 YMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYN 521
Query: 476 RVL 478
++
Sbjct: 522 AII 524
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 84/183 (45%), Gaps = 4/183 (2%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN +I L +M + G P + TYN ++ K + ++A
Sbjct: 517 VVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCG 576
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M+ + P+ ITY FI C+ G+ +AF F++M KR P L T+++ I G
Sbjct: 577 KMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEG 636
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ EDA + L D + + + +L+ L K A ++ M K GL+P+ +YR
Sbjct: 637 QAEDAER---LLDDGCEPNVDTYTTLVRGLCGK-GRCYEADQLVESMKKKGLQPSEEIYR 692
Query: 476 RVL 478
+L
Sbjct: 693 ALL 695
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 4/110 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ LI +C+ + LL + GCEP TY ++ LC G+ +A +L+E M
Sbjct: 625 YSSLIDGLCQEGQAEDAERLLDD----GCEPNVDTYTTLVRGLCGKGRCYEADQLVESMK 680
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
+ P Y +V C+ + + A F+ MV G QP L+ + A I
Sbjct: 681 KKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALI 730
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 4/183 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI R + L EM + G P +TYN ++ + DA L +M+
Sbjct: 485 YANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMV 544
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P + TY + I + + A NF +MVK+GL P + T+ +FI G R
Sbjct: 545 ESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTS 604
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A+K + K N+ +SL D A++ ++ +G PNV Y ++
Sbjct: 605 LAFK-IFHEMKKRDYFPNL--CTYSSLIDGLCQEGQAEDA-ERLLDDGCEPNVDTYTTLV 660
Query: 479 KHL 481
+ L
Sbjct: 661 RGL 663
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 4/115 (3%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y I +C+ + EM++ P TY+ ++ LC+ GQ DA E
Sbjct: 587 VITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDA----E 642
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+L C P+ TY + C G+ A M K+GLQP + A + G
Sbjct: 643 RLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVG 697
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 88/179 (49%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N L+ +C L+ M + G +P +TY VL V+CK+GQ A A ELL +M
Sbjct: 197 NTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEE 256
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
RN DA+ Y I I C+ G D AFN FN+M +G + + T+ I G+ R++D
Sbjct: 257 RNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDD 316
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
K + + S + + +S+L K A +L EMM+ G+ PN Y ++
Sbjct: 317 GAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLI 375
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 5/219 (2%)
Query: 280 GLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
G +A +++K E + Y+I+I +C+ +L EM G + +TY
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITY 301
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N ++G C G+ D +LL +M+ R P+ +T+ + I + GK A +M++
Sbjct: 302 NTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQ 361
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM 454
RG+ P T+ + I G+ R E+A + V L K M +++L + + K N
Sbjct: 362 RGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDD 421
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
+ EM G+ N Y +++ S + +AK L
Sbjct: 422 GLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKL 460
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 88/193 (45%)
Query: 289 IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
IK + + YN LI C + LL +M + P +T++ ++ K G+
Sbjct: 291 IKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLR 350
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
+A +LL+EM+ R P+ ITY I C+ + + A + M+ +G P + T I
Sbjct: 351 EADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILI 410
Query: 409 KGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLR 468
GY R +D + + + ++ + Y+ L ++ +AK + EM+ +R
Sbjct: 411 NGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVR 470
Query: 469 PNVSVYRRVLKHL 481
P++ Y+ +L L
Sbjct: 471 PDIVSYKILLDGL 483
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 131/332 (39%), Gaps = 64/332 (19%)
Query: 204 NCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISS--------------KALTKKG 249
N GR DD +LL D ++ N F VLI S K + ++G
Sbjct: 310 NAGRWDDGA---KLLRDMIKRKISPNVVTF---SVLIDSFVKEGKLREADQLLKEMMQRG 363
Query: 250 IWRVVEVLNQ-VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCR 308
I N + G C + + I+M ++ + K + + +NILI C+
Sbjct: 364 IAPNTITYNSLIDGFCKENRLEEAIQMVDLM--------ISKGCDPDIMTFNILINGYCK 415
Query: 309 RCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAIT 368
+L EM G T+TYN ++ C++G+ A +L +EM+ R PD ++
Sbjct: 416 ANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVS 475
Query: 369 YEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY------- 421
Y+I + C G+ + A F ++ K ++ + + I G + +DA+
Sbjct: 476 YKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLP 535
Query: 422 -KYVVLSADKYK------------SSSNML---------------YSLLASLHDKNNNPV 453
K V L A Y S +++L Y++L H +++
Sbjct: 536 LKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDAT 595
Query: 454 MAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSH 485
A ++ EM +G +VS + V+ L +
Sbjct: 596 TAAELIEEMKSSGFPADVSTVKMVINMLSSGE 627
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 74/176 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ++ MC+ +LL +M + + + Y+ ++ LCK+G +A L EM
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 290
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ D ITY I C G++D M+KR + P + T + I + +
Sbjct: 291 IKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLR 350
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+A + + + + + + Y+ L K N A ++ M+ G P++ +
Sbjct: 351 EADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTF 406
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 22/180 (12%)
Query: 215 RQLLNDFNVYQVCLN--------EKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLV 266
R++ D Y++ L+ EKA + SK GI+ ++ + G C
Sbjct: 467 RRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMII-----IHGMCNA 521
Query: 267 SGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
S V ++F L L K + YNI+I E+CR+ L +M + G
Sbjct: 522 SKVDDAWDLFCSLPL--------KGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEG 573
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
P LTYN ++ + A EL+EEM D T ++ ++ G+ D +F
Sbjct: 574 HAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKM-VINMLSSGELDKSF 632
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 74/177 (41%), Gaps = 6/177 (3%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
DL +M Q P + +N + + K Q L ++M + T I I
Sbjct: 74 DLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCF 133
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSAD-KYKSSS 435
CR K AF+ +++K G +P + G + R +A + V + +K +
Sbjct: 134 CRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTL 193
Query: 436 NMLYSLLAS--LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
L +L+ L+ K ++ V+ ++ M++ G +PN Y VL + S Q +A
Sbjct: 194 ITLNTLVNGLCLNGKVSDAVV---LIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 97/216 (44%), Gaps = 5/216 (2%)
Query: 271 ALIEMFSVLGLYEMAKYVIK-----KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI V G +E A + K + YN +IK C D + + +M +
Sbjct: 382 ALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKA 441
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P +TYN ++ CK G +A LLE M G PDA TY I R GK + A
Sbjct: 442 GSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHA 501
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
+ F M++ G+ P T+ A I GYF + +DA + S+ Y+++ S
Sbjct: 502 TSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISG 561
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K N+ A+N +M+K GL PNV Y + L
Sbjct: 562 FSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGL 597
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 80/180 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ LI +C + D+L EM Q G EP TY L LC G ++A ELL +M
Sbjct: 275 YSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMK 334
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R C P+ T+ I R GKF++A +++M+ GL P T+ A I + R+E
Sbjct: 335 KRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFE 394
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A+ S Y+ + + A + +M+K G PNV Y ++
Sbjct: 395 TAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLI 454
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 162/381 (42%), Gaps = 39/381 (10%)
Query: 130 PKQVSEIIELLRSGDSETESKLLSMSVSLSNASVIEILRVL-NSEKVSAL---------- 178
P+ VS+I +L S E S+L +S L V+ IL+ N++ V
Sbjct: 48 PELVSKISTILSSPKWEHSSELCHLSPKLKPHHVVNILQTHKNTDSVLRFFFWISRRKFF 107
Query: 179 -----CFLKYMREIMPE--FYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEK 231
CF+ + ++ + F + L+I +C + + + Q L++ N ++
Sbjct: 108 KHDMSCFVSMLNRLVRDRLFAPADHVRILMIKSCRNEGEVKRVTQFLSEIN------SKY 161
Query: 232 AFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVL-------GLYEM 284
FG+ ++ L + G + +V++ + L SG+R + F+ + G +
Sbjct: 162 DFGYTLCSFTT-LLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQE 220
Query: 285 AKYVIKKTERKVSY-----YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
AK ++ R +Y Y LI CR + + M + GC+P ++TY+ ++
Sbjct: 221 AKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLIN 280
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
LC G+ +A ++LEEM+ + P TY I +V C G A +M KRG P
Sbjct: 281 GLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVP 340
Query: 400 RLATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNV 458
+ T A I G ++E A Y + AD ++ +L+ L + A +
Sbjct: 341 NIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFET-AFTI 399
Query: 459 LSEMMKNGLRPNVSVYRRVLK 479
M+ +G P+ Y ++K
Sbjct: 400 FKWMLSHGSLPSTQTYNEIIK 420
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 82/167 (49%), Gaps = 2/167 (1%)
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
RD+ ++M G P LT+N ++ +LCK G+ +A ++ + + +P+A TY I+
Sbjct: 187 RDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILG 246
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
CR D+AF F++MVK G P T++ I G R E+A + K +
Sbjct: 247 HCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPT 306
Query: 436 NMLYSL-LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y++ L SL D + A +L +M K G PN+ + ++ L
Sbjct: 307 VYTYTIPLVSLCDAGCSS-EAVELLGKMKKRGCVPNIQTFTALISGL 352
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 77/163 (47%), Gaps = 2/163 (1%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L +M + G P + TYN ++ K ++A +M+ + P+ ITY FI C
Sbjct: 539 LFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLC 598
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLS-ADKYKSSSN 436
R G+ +AF F++M KR P L T+++ I G R EDA Y +L+ Y N
Sbjct: 599 RNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPN 658
Query: 437 M-LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ Y+ L A ++ M K GL+P+ +YR +L
Sbjct: 659 VDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALL 701
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 75/183 (40%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ + LI + R F+ L +M G P T+TYN ++ LC G+ A + +
Sbjct: 342 IQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFK 401
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
ML P TY I C +G A F++M+K G P + T+ I GY
Sbjct: 402 WMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQG 461
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+A + + + Y+ L S + A ++ MM++G+ PN Y
Sbjct: 462 NLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYT 521
Query: 476 RVL 478
++
Sbjct: 522 AII 524
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Query: 299 YNILIKEMCR--RCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
Y+ LI +C+ R + +LL + GCEP TY ++ LC G+ +A +L+
Sbjct: 625 YSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVS 684
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
M + P Y ++ C+ K + A N F M G Q L+ + A I
Sbjct: 685 MQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALI 736
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 97/216 (44%), Gaps = 5/216 (2%)
Query: 271 ALIEMFSVLGLYEMAKYVIK-----KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI V G +E A + K + YN +IK C D + + +M +
Sbjct: 382 ALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKA 441
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P +TYN ++ CK G +A LLE M G PDA TY I R GK + A
Sbjct: 442 GSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHA 501
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
+ F M++ G+ P T+ A I GYF + +DA + S+ Y+++ S
Sbjct: 502 TSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISG 561
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K N+ A+N +M+K GL PNV Y + L
Sbjct: 562 FSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGL 597
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 80/180 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ LI +C + D+L EM Q G EP TY L LC G ++A ELL +M
Sbjct: 275 YSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMK 334
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R C P+ T+ I R GKF++A +++M+ GL P T+ A I + R+E
Sbjct: 335 KRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFE 394
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A+ S Y+ + + A + +M+K G PNV Y ++
Sbjct: 395 TAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLI 454
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 162/381 (42%), Gaps = 39/381 (10%)
Query: 130 PKQVSEIIELLRSGDSETESKLLSMSVSLSNASVIEILRVL-NSEKVSAL---------- 178
P+ VS+I +L S E S+L +S L V+ IL+ N++ V
Sbjct: 48 PELVSKISTILSSPKWEHSSELCHLSPKLKPHHVVNILQTHKNTDSVLRFFFWISRRKFF 107
Query: 179 -----CFLKYMREIMPE--FYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEK 231
CF+ + ++ + F + L+I +C + + + Q L++ N ++
Sbjct: 108 KHDMSCFVSMLNRLVRDRLFAPADHVRILMIKSCRNEGEVKRVTQFLSEIN------SKY 161
Query: 232 AFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVL-------GLYEM 284
FG+ ++ L + G + +V++ + L SG+R + F+ + G +
Sbjct: 162 DFGYTLCSFTT-LLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQE 220
Query: 285 AKYVIKKTERKVSY-----YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
AK ++ R +Y Y LI CR + + M + GC+P ++TY+ ++
Sbjct: 221 AKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLIN 280
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
LC G+ +A ++LEEM+ + P TY I +V C G A +M KRG P
Sbjct: 281 GLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVP 340
Query: 400 RLATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNV 458
+ T A I G ++E A Y + AD ++ +L+ L + A +
Sbjct: 341 NIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFET-AFTI 399
Query: 459 LSEMMKNGLRPNVSVYRRVLK 479
M+ +G P+ Y ++K
Sbjct: 400 FKWMLSHGSLPSTQTYNEIIK 420
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 82/167 (49%), Gaps = 2/167 (1%)
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
RD+ ++M G P LT+N ++ +LCK G+ +A ++ + + +P+A TY I+
Sbjct: 187 RDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILG 246
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
CR D+AF F++MVK G P T++ I G R E+A + K +
Sbjct: 247 HCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPT 306
Query: 436 NMLYSL-LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y++ L SL D + A +L +M K G PN+ + ++ L
Sbjct: 307 VYTYTIPLVSLCDAGCSS-EAVELLGKMKKRGCVPNIQTFTALISGL 352
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 77/163 (47%), Gaps = 2/163 (1%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L +M + G P + TYN ++ K ++A +M+ + P+ ITY FI C
Sbjct: 539 LFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLC 598
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLS-ADKYKSSSN 436
R G+ +AF F++M KR P L T+++ I G R EDA Y +L+ Y N
Sbjct: 599 RNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPN 658
Query: 437 M-LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ Y+ L A ++ M K GL+P+ +YR +L
Sbjct: 659 VDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALL 701
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 75/183 (40%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ + LI + R F+ L +M G P T+TYN ++ LC G+ A + +
Sbjct: 342 IQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFK 401
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
ML P TY I C +G A F++M+K G P + T+ I GY
Sbjct: 402 WMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQG 461
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+A + + + Y+ L S + A ++ MM++G+ PN Y
Sbjct: 462 NLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYT 521
Query: 476 RVL 478
++
Sbjct: 522 AII 524
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 10/150 (6%)
Query: 299 YNILIKEMCR--RCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
Y+ LI +C+ R + +LL + GCEP TY ++ LC G+ +A +L+
Sbjct: 625 YSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVS 684
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI----KGYF 412
M + P Y ++ C+ K + A N F M G Q L+ + A I K F
Sbjct: 685 MQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENF 744
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
I E+A +K+ +S +++++L
Sbjct: 745 I----EEAQCIFQTMLEKHWNSDEVVWTVL 770
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 96/215 (44%), Gaps = 8/215 (3%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+ G C VR E+F + +++ E V YN LI C L+
Sbjct: 378 IDGLCKTGQVRDAQEVFK--------RMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLM 429
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
EM GC P +TYN ++ LCK G+ +A L +M + C+PD ITY I C++
Sbjct: 430 EEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKL 489
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
+ D+A F+ M+K+ + P + T + ++GY +DA + + S Y
Sbjct: 490 ERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTY 549
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ L K V A+ VL M K G +PNV Y
Sbjct: 550 TSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTY 584
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 84/180 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ +CR +LL EMR+ G +P +Y+ ++ LCK G+ A ++ E+
Sbjct: 234 YNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNS 293
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+C PD + Y I C+ G+ D A F +M + +P + T A + G R +
Sbjct: 294 NGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQ 353
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + + D+ + + + YS L K A+ V M+ G+ PNV Y ++
Sbjct: 354 EAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLI 413
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 83/196 (42%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ +I CR+ L +M + GC P +TYN +L LC+NG +A ELL+
Sbjct: 196 VVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLD 255
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM R PD +Y+ + C+ GK D+A F P + ++ I G
Sbjct: 256 EMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAG 315
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R ++A K + + ++ L K + A+ VL M PNV Y
Sbjct: 316 RLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYS 375
Query: 476 RVLKHLHTSHQEHMAK 491
++ L + Q A+
Sbjct: 376 SLIDGLCKTGQVRDAQ 391
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 97/225 (43%), Gaps = 13/225 (5%)
Query: 263 SCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRD 317
SCL+ G F L +MA+ + ++ V ++ L++ C
Sbjct: 480 SCLIGG-------FCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAER 532
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
LL EM C P TY ++ CK G+ +A +L+ M R C P+ +TY I C
Sbjct: 533 LLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFC 592
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV-LSADKYKSSSN 436
R GK VA+ +MV G+QP + T+ + I G+ E+A K + L D+ +
Sbjct: 593 RAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADM 652
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y ++ + A +L + ++G P +Y +++ L
Sbjct: 653 FAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGL 697
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ LI +C+ L +MR+ CEP +T+ ++ LCK + +A ++LE
Sbjct: 301 VVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLE 360
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
M RNC P+ ITY I C+ G+ A F +M+ RG++P + T+ + I G+
Sbjct: 361 TMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGF 416
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 77/182 (42%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V + L+ +C+ + + +L M C P +TY+ ++ LCK GQ DA E
Sbjct: 333 EPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQE 392
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+ + M+ R P+ +TY I C D A +M G P + T+ I G
Sbjct: 393 VFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLC 452
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
R +A + K+ + + YS L K MA+ + +M+K + P+V
Sbjct: 453 KTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVV 512
Query: 473 VY 474
+
Sbjct: 513 TF 514
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 77/189 (40%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E+ V + I+I +C+ +M++ G P TYN ++ CK + A
Sbjct: 123 EKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYL 182
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
LL+EM P+ +TY I CR K D A+ F QMV+ G P L T+ + G
Sbjct: 183 LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLC 242
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
++AY+ + ++ Y L + K MA V + P+V
Sbjct: 243 RNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVV 302
Query: 473 VYRRVLKHL 481
Y ++ L
Sbjct: 303 AYSTLIAGL 311
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 92/227 (40%), Gaps = 32/227 (14%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA----- 350
V Y ++I+ +C+ D +LL EMR+ G P YN+V+ LCK A A
Sbjct: 59 VFTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFR 118
Query: 351 ---CE------------------------LLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
CE +M + P+ TY + I C+V K
Sbjct: 119 SMECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVH 178
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
A+ +M + GL P + T++ I G+ + + AYK + + + Y+ L
Sbjct: 179 RAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLL 238
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
S +N A +L EM + GL+P+ Y ++ L + + MA
Sbjct: 239 SGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMA 285
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 64/153 (41%), Gaps = 3/153 (1%)
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P TY V+ LCK+G ACELLEEM PDA Y I C+ A
Sbjct: 54 GITPNVFTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKA 113
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
++F M + + T I G R +A Y K + Y++L +
Sbjct: 114 LDYFRSME---CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLING 170
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
K + A +L EM ++GL PNV Y V+
Sbjct: 171 FCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVI 203
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 7/150 (4%)
Query: 251 WRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVS------YYNILIK 304
+R++E + G V R+LI F G E A+ ++++ ER + Y +++
Sbjct: 601 YRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMD 660
Query: 305 EMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM-LGRNCH 363
+CR +LL ++Q G P Y ++ LC+ + A E+LEEM L R
Sbjct: 661 GLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSR 720
Query: 364 PDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
P+A YE I R G+ + A ++++
Sbjct: 721 PNAEAYEAVIQELAREGRHEEANALADELL 750
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 96/215 (44%), Gaps = 8/215 (3%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+ G C VR E+F + +++ E V YN LI C L+
Sbjct: 259 IDGLCKTGQVRDAQEVFK--------RMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLM 310
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
EM GC P +TYN ++ LCK G+ +A L +M + C+PD ITY I C++
Sbjct: 311 EEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKL 370
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
+ D+A F+ M+K+ + P + T + ++GY +DA + + S Y
Sbjct: 371 ERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTY 430
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ L K V A+ VL M K G +PNV Y
Sbjct: 431 TSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTY 465
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 84/180 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ +CR +LL EMR+ G +P +Y+ ++ LCK G+ A ++ E+
Sbjct: 115 YNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNS 174
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+C PD + Y I C+ G+ D A F +M + +P + T A + G R +
Sbjct: 175 NGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQ 234
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + + D+ + + + YS L K A+ V M+ G+ PNV Y ++
Sbjct: 235 EAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLI 294
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 83/196 (42%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ +I CR+ L +M + GC P +TYN +L LC+NG +A ELL+
Sbjct: 77 VVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLD 136
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM R PD +Y+ + C+ GK D+A F P + ++ I G
Sbjct: 137 EMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTG 196
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R ++A K + + ++ L K + A+ VL M PNV Y
Sbjct: 197 RLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYS 256
Query: 476 RVLKHLHTSHQEHMAK 491
++ L + Q A+
Sbjct: 257 SLIDGLCKTGQVRDAQ 272
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 97/225 (43%), Gaps = 13/225 (5%)
Query: 263 SCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRD 317
SCL+ G F L +MA+ + ++ V ++ L++ C
Sbjct: 361 SCLIGG-------FCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAER 413
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
LL EM C P TY ++ CK G+ +A +L+ M R C P+ +TY I C
Sbjct: 414 LLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFC 473
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV-LSADKYKSSSN 436
R GK VA+ +MV G+QP + T+ + I G+ E+A K + L D+ +
Sbjct: 474 RAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADM 533
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y ++ + A +L + ++G P +Y +++ L
Sbjct: 534 FAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGL 578
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ LI +C+ L +MR+ CEP +T+ ++ LCK + +A ++LE
Sbjct: 182 VVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLE 241
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
M RNC P+ ITY I C+ G+ A F +M+ RG++P + T+ + I G+
Sbjct: 242 TMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGF 297
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 77/182 (42%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V + L+ +C+ + + +L M C P +TY+ ++ LCK GQ DA E
Sbjct: 214 EPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQE 273
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+ + M+ R P+ +TY I C D A +M G P + T+ I G
Sbjct: 274 VFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLC 333
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
R +A + K+ + + YS L K MA+ + +M+K + P+V
Sbjct: 334 KTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVV 393
Query: 473 VY 474
+
Sbjct: 394 TF 395
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 77/189 (40%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E+ V + I+I +C+ +M++ G P TYN ++ CK + A
Sbjct: 4 EKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYL 63
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
LL+EM P+ +TY I CR K D A+ F QMV+ G P L T+ + G
Sbjct: 64 LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLC 123
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
++AY+ + ++ Y L + K MA V + P+V
Sbjct: 124 RNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVV 183
Query: 473 VYRRVLKHL 481
Y ++ L
Sbjct: 184 AYSTLIAGL 192
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 74/164 (45%)
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
CE +T+ ++ LCK + +A +M + P+ TY + I C+V K A+
Sbjct: 3 CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 62
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
+M + GL P + T++ I G+ + + AYK + + + Y+ L S
Sbjct: 63 LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 122
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
+N A +L EM + GL+P+ Y ++ L + + MA
Sbjct: 123 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMA 166
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 7/131 (5%)
Query: 270 RALIEMFSVLGLYEMAKYVIKKTERKVS------YYNILIKEMCRRCDFKGPRDLLVEMR 323
R+LI F G E A+ ++++ ER + Y +++ +CR +LL ++
Sbjct: 501 RSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIK 560
Query: 324 QVGCEPITLTYNYVLGVLCKNGQDADACELLEEM-LGRNCHPDAITYEIFIVYSCRVGKF 382
Q G P Y ++ LC+ + A E+LEEM L R P+A YE I R G+
Sbjct: 561 QSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRH 620
Query: 383 DVAFNFFNQMV 393
+ A ++++
Sbjct: 621 EEANALADELL 631
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 90/191 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI + + L EMR+ GC P T TYN ++ L K G+ A ELLE
Sbjct: 114 VRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLE 173
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM C PD +TY I + G+ AF F +M +RG +P T A +
Sbjct: 174 EMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAG 233
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R +DA + + ++ + Y+ L + K + V A N+L EM +NG +P+V Y
Sbjct: 234 RVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYS 293
Query: 476 RVLKHLHTSHQ 486
++ L + Q
Sbjct: 294 CLITGLIKASQ 304
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 85/191 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ LI + R ++ +++ EM+ GC+P TYN ++ L K GQ +A LL
Sbjct: 44 VVSYSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLA 103
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM C PD TY I + G+ AF F +M +RG P T+ + I G
Sbjct: 104 EMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVG 163
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R + A + + M YS L + K+ V A + EM + G +P+ +
Sbjct: 164 RSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFT 223
Query: 476 RVLKHLHTSHQ 486
++ L + +
Sbjct: 224 ALMDALGKAGR 234
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 91/207 (43%), Gaps = 15/207 (7%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L EM + +K V YN LI + D +LL EM++ GC+P +TY+ ++
Sbjct: 242 LDEMKERGVKPG---VVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITG 298
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
L K Q +AC++L++M C PD ITY I + G + A F++M +G P
Sbjct: 299 LIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPD 358
Query: 401 LATHAAFIKGYFIFYRYEDA------YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM 454
+ T++ I R E A + V + D + Y + ++ K
Sbjct: 359 VVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFT------YCSIITVLGKAGQVDD 412
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A + SEM GL P+V Y L L
Sbjct: 413 ADRLFSEMRGKGLSPDVITYNAFLNSL 439
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ LI + + + L EM VG +P TY ++ VL K GQ DA L
Sbjct: 359 VVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFS 418
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM G+ PD ITY F+ R G+F A F M + GL P +AT+ A + G
Sbjct: 419 EMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTK 478
Query: 416 RYEDA 420
+DA
Sbjct: 479 EVDDA 483
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 92/229 (40%), Gaps = 47/229 (20%)
Query: 263 SCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRD 317
SCL++G+ ++ + A V+KK E++ YN LI + +
Sbjct: 293 SCLITGLIKASQL-------DEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGR 345
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L M+ GC P +TY+ ++ L K + AC L EEM PD TY I
Sbjct: 346 LFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLG 405
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ G+ D A F++M +GL P + T+ AF+ R+++A K
Sbjct: 406 KAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARK--------------- 450
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
+ +M ++GL P+V+ Y +L L + +
Sbjct: 451 --------------------IFEDMKESGLLPDVATYDALLLGLSKTKE 479
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 96/244 (39%), Gaps = 2/244 (0%)
Query: 263 SCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
S L++G+ E L++ K +K + + L+ + + +LL EM
Sbjct: 188 SSLITGLGKDGETVKAFKLFQEMKRRGRKPDSIT--FTALMDALGKAGRVDDALELLDEM 245
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
++ G +P +TYN ++ K G +A LL+EM C PD +TY I + +
Sbjct: 246 KERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQL 305
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
D A +M K G P T+ I G DA + K + + YS L
Sbjct: 306 DEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTL 365
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSL 502
+ K A + EM G++P++ Y ++ L + Q A L S L
Sbjct: 366 ITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGL 425
Query: 503 GSSV 506
V
Sbjct: 426 SPDV 429
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 81/187 (43%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN + + R FK R + +M++ G P TY+ +L L K + DAC LL+
Sbjct: 429 VITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLK 488
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
E++ + C D++ ++ + G D A +GL P +++ A I
Sbjct: 489 ELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAG 548
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R +A+ + ++ + YS L S + A +L EM K GL+ + Y
Sbjct: 549 RVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYS 608
Query: 476 RVLKHLH 482
+++ L
Sbjct: 609 NLVRKLQ 615
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 67/162 (41%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P +TYN +L L K GQ +A L EE+ PD ++Y I R GK++ A
Sbjct: 7 PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
+M +G +P L T+ + ++++A + + D Y+ L S K
Sbjct: 67 VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
A + +EM + G P+ Y ++ L + A
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKA 168
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 77/191 (40%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN L+ + + + + L E++ P ++Y+ ++ L + G+ A E++
Sbjct: 9 VVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVA 68
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM + C P+ TY + + G+FD A +M G P + T+ I
Sbjct: 69 EMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAG 128
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R +A+ ++ Y+ L K A +L EM ++G P+V Y
Sbjct: 129 RLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYS 188
Query: 476 RVLKHLHTSHQ 486
++ L +
Sbjct: 189 SLITGLGKDGE 199
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 96/190 (50%)
Query: 292 TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADAC 351
T+ V Y+I+I +C+ + +LL EM+Q P TYN ++ LCK GQ
Sbjct: 199 TKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVK 258
Query: 352 ELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
LL EM+ N +P+ T+ I I C+ GK + A M+++G++P + T++A + GY
Sbjct: 259 TLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGY 318
Query: 412 FIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
+ + + A + + DK + YS+L + + K N A + E+ + GL+P+
Sbjct: 319 CLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDT 378
Query: 472 SVYRRVLKHL 481
Y +L L
Sbjct: 379 VTYSTILHGL 388
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 91/194 (46%), Gaps = 3/194 (1%)
Query: 283 EMAKYVIKK-TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
E+ +++I+K E + Y+ ++ C R R + +R G +P +Y+ ++
Sbjct: 294 EVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGY 353
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
CK A A +L E+ + PD +TY + VG+ A F++M++ G P +
Sbjct: 354 CKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDI 413
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM-LYSLLASLHDKNNNPVMAKNVLS 460
H+ + GYF + E+A + ++ + +N+ Y+++ + KN+ A +
Sbjct: 414 CLHSTLLFGYFKYGLVEEAM-LLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFE 472
Query: 461 EMMKNGLRPNVSVY 474
++ GL P+V Y
Sbjct: 473 KLPSIGLIPDVRTY 486
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 5/157 (3%)
Query: 271 ALIEMFSVLGLYEMAKYVIKK-----TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
+LI+ LG +E K ++ + V ++ILI +C+ + +++ M +
Sbjct: 243 SLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEK 302
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G EP +TY+ ++ C GQ A + + + P+ +Y I I C+ A
Sbjct: 303 GVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKA 362
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
F ++ ++GL+P T++ + G R DA K
Sbjct: 363 MQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKK 399
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 55/134 (41%), Gaps = 5/134 (3%)
Query: 280 GLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
GL E A + K ER +S+Y ++I +C+ + + ++ +G P TY
Sbjct: 427 GLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTY 486
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N ++ C+ G + +L +M C + ITY + + R K +F +M
Sbjct: 487 NVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAG 546
Query: 395 RGLQPRLATHAAFI 408
RG T I
Sbjct: 547 RGFSFDATTTGVLI 560
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 35/79 (44%)
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
Y V+ LCKN + +A + E++ PD TY + I CR G FD +M
Sbjct: 451 YTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKME 510
Query: 394 KRGLQPRLATHAAFIKGYF 412
G T+ ++G+F
Sbjct: 511 DNGCPANNITYNVIMQGFF 529
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%)
Query: 279 LGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
LG +AK + + + + LI +C+ +F +L +M GC+P TY ++
Sbjct: 144 LGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTII 203
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
LCK G+ A A L+++M C PD +TY I C+ + A + F+ M +G+
Sbjct: 204 NGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGIS 263
Query: 399 PRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNV 458
P + ++ + I+G F R+++A + + +SLL + K N + A+ V
Sbjct: 264 PTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGV 323
Query: 459 LSEMMKNGLRPNVSVYRRVL 478
L M + G+ PNV Y ++
Sbjct: 324 LKTMTEMGVEPNVITYNSLM 343
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 97/215 (45%), Gaps = 5/215 (2%)
Query: 272 LIEMFSVLGLYEMAKYVIKK-----TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI++F G A+ V+K E V YN L+ + + R L M G
Sbjct: 307 LIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRG 366
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
C+P +Y+ ++ C + +A +L EM+ + P+ ++Y I C++GK A
Sbjct: 367 CKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREAR 426
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
F M G P L T++ ++G+ A++ Y + ++Y++L
Sbjct: 427 ELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSM 486
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K+ N A+ + SE+ +GL+P+V +Y ++ L
Sbjct: 487 CKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGL 521
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 87/205 (42%), Gaps = 5/205 (2%)
Query: 279 LGLYEMAKYVIKKT-----ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLT 333
+G A +IKK + V Y+ LI +C+ D+ M+ G P ++
Sbjct: 209 MGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVS 268
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
Y ++ LC + +A +L EM N PD +T+ + I C+ G A M
Sbjct: 269 YTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMT 328
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPV 453
+ G++P + T+ + + GY + +A K + + YS+L + +
Sbjct: 329 EMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRID 388
Query: 454 MAKNVLSEMMKNGLRPNVSVYRRVL 478
AK + +EM+ GL PN Y ++
Sbjct: 389 EAKQLFNEMIHQGLTPNTVSYTTLI 413
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 64/151 (42%), Gaps = 8/151 (5%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+ G C+V + ++F+ EM + T VSY LI C+ + R+L
Sbjct: 378 INGYCMVKRIDEAKQLFN-----EMIHQGL--TPNTVSY-TTLIHAFCQLGKLREARELF 429
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
+M G P TY+ +L CK G A L M G P+ + Y I I C+
Sbjct: 430 KDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKS 489
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
G + A F+++ GLQP + + I G
Sbjct: 490 GNLNHARKLFSELFVHGLQPDVQIYTTIING 520
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 67/164 (40%), Gaps = 8/164 (4%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
LI F LG A+ + K + Y++L++ C++ L M+
Sbjct: 411 TLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGT 470
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
+P + Y ++ +CK+G A +L E+ PD Y I C+ G D A
Sbjct: 471 YLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEA 530
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSAD 429
F +M + G P ++ I+G F +++D + V L +
Sbjct: 531 LEAFRKMEEDGCPPNEFSYNVIIRG---FLQHKDESRAVQLIGE 571
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
M + K V +N+LI +CRR + ++L +M Q GC P +L+YN +L CK
Sbjct: 294 MEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCK 353
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
+ A E +E M+ R C+PD ++Y + CR G+ DVA +Q+ +G P L +
Sbjct: 354 QKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLIS 413
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
+ I G + ++A + + K + YS +AS + + A ++
Sbjct: 414 YNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQ 473
Query: 464 KNGLRPNVSVYRRVLKHLHTSHQEHMA 490
G+RP ++Y +L L + H A
Sbjct: 474 DMGIRPTAALYNAILLGLCKRRETHNA 500
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 2/222 (0%)
Query: 271 ALIEMFSVLGLYEMAKYVIKK--TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCE 328
A++ + G + A+ ++ E YN LI+ +C R +L +M + GC
Sbjct: 139 AMVAGYCGAGQLDAARRLVADMPVEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCL 198
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P +TY +L CK A +LL+EM + C PD +TY + + C+ G+ + A F
Sbjct: 199 PDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEF 258
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
+ G +P ++ +KG F R+EDA K + A K + + +++L S +
Sbjct: 259 LKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCR 318
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
A VL +M + G PN Y +L + H A
Sbjct: 319 RGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKA 360
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 11/215 (5%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPI 330
ALI+ G A+ V+ + V YN ++ C R L+ +M EP
Sbjct: 109 ALIKKLCASGRTADARRVLAASGPDVMVYNAMVAGYCGAGQLDAARRLVADMP---VEPD 165
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN 390
TYN ++ LC G+ ++A +LE+M R C PD +TY I + +C+ + A +
Sbjct: 166 AYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLD 225
Query: 391 QMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV----VLSADKYKSSSNMLYSLLASLH 446
+M +G P + T+ + G R EDA +++ + S N++ L +
Sbjct: 226 EMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAE 285
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ A+ ++ EM G PNV + ++ L
Sbjct: 286 RWED----AEKLMEEMAHKGCPPNVVTFNMLISFL 316
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 7/216 (3%)
Query: 272 LIEMFSVLGLYEMAKYVIKK------TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
LI GL E A V+++ T +SY N L+ C++ + + M
Sbjct: 312 LISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSY-NPLLHAFCKQKKIHKAMEFVELMVSR 370
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
GC P ++YN +L LC+NG+ A ELL ++ + C P I+Y I + GK A
Sbjct: 371 GCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEA 430
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
++M +GLQP + T++ G R E+A + D + LY+ +
Sbjct: 431 LELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLG 490
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K A ++ + M+ +G PN S Y +++ L
Sbjct: 491 LCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGL 526
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 35/218 (16%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+++ +C+ + + L + GCEP T++YN VL L + DA +L+EEM
Sbjct: 239 YNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMA 298
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C P+ +T+ + I + CR G + A QM + G P ++ + + +
Sbjct: 299 HKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIH 358
Query: 419 DAYKYV-----------------VLSADKYKSSSNMLYSLLASLHDKNNNPVM------- 454
A ++V +L+A ++ LL L DK +PV+
Sbjct: 359 KAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVI 418
Query: 455 -----------AKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A +L EM GL+P++ Y + L
Sbjct: 419 DGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGL 456
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 45/108 (41%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K + + Y+ + +CR + +++ +G P YN +L LCK + +
Sbjct: 440 KGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHN 499
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
A +L M+ C P+ TY I + G A F Q+ RG+
Sbjct: 500 AIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRGV 547
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 87/195 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +NILI +CR+ D+L +M Q GC+P +L+YN +L CK + A E LE
Sbjct: 344 VVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLE 403
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+ R C+PD +TY + C+ GK + A NQ+ +G P L T+ I G
Sbjct: 404 RMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAG 463
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ A K + K + YS L + A E + G+RPN +
Sbjct: 464 KTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFN 523
Query: 476 RVLKHLHTSHQEHMA 490
++ L S Q A
Sbjct: 524 SIMLGLCKSRQTDRA 538
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 88/183 (48%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN +++ +C K ++L M Q C P +TY ++ C++ A +LL+
Sbjct: 204 VVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLD 263
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM R C PD +TY + + C+ G+ D A F N M G QP + TH ++
Sbjct: 264 EMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTG 323
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R+ DA K + K S S + +++L + + A ++L +M ++G +PN Y
Sbjct: 324 RWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYN 383
Query: 476 RVL 478
+L
Sbjct: 384 PLL 386
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++ +C+ + ++L ++ GC P+ +TYN V+ L K G+ A +LL+EM
Sbjct: 417 YNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMR 476
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
++ PD ITY + R GK D A FF++ + G++P T + + G + +
Sbjct: 477 AKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTD 536
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
A ++V ++ + Y++L A +L+E+ GL
Sbjct: 537 RAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 100/226 (44%), Gaps = 12/226 (5%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN+L+ +C+ L +M GC+P +T+N +L +C G+ DA +LL
Sbjct: 274 VVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLA 333
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML + P +T+ I I + CR G A + +M + G QP ++ + G+
Sbjct: 334 DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEK 393
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ + A +Y+ + + Y+ + + K+ A +L+++ G P + Y
Sbjct: 394 KMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYN 453
Query: 476 RVLKHLHTSHQ---------EHMAKCL---SSRYSSLSLGSSVEAR 509
V+ L + + E AK L + YSSL G S E +
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 86/212 (40%), Gaps = 32/212 (15%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG---------------------- 339
LI+ CR + +L + G P +TYN ++
Sbjct: 143 LIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSP 202
Query: 340 ----------VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFF 389
LC +G+ A E+L+ ML R+C+PD ITY I I +CR A
Sbjct: 203 DVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLL 262
Query: 390 NQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKN 449
++M RG P + T+ + G R ++A K++ + + ++++
Sbjct: 263 DEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCST 322
Query: 450 NNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ A+ +L++M++ G P+V + ++ L
Sbjct: 323 GRWMDAEKLLADMLRKGFSPSVVTFNILINFL 354
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 76/174 (43%), Gaps = 7/174 (4%)
Query: 303 IKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNC 362
+++M R + + L M G P + ++ C+ G+ A ++LE + G
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 363 HPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
PD ITY + I C+ G+ + A + ++M + P + T+ ++ + + A +
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 423 YV--VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ +L D Y + Y++L +++ A +L EM G P+V Y
Sbjct: 226 VLDRMLQRDCYPDV--ITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTY 277
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 9/166 (5%)
Query: 244 ALTKKG-IWRVVEVLNQV---GGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK---- 295
AL K G + VE+LNQ+ G S ++ +I+ + G A ++ + K
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKP 482
Query: 296 -VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
Y+ L+ + R E ++G P +T+N ++ LCK+ Q A + L
Sbjct: 483 DTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFL 542
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
M+ R C P+ +Y I I G A N++ +GL +
Sbjct: 543 VFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKK 588
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 88/195 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +NILI +CR+ D+L +M GC P +L+YN +L CK + A E L+
Sbjct: 187 VVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLD 246
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+ R C+PD +TY + C+ GK DVA NQ+ +G P L T+ I G
Sbjct: 247 IMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVG 306
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ E A K + K + YS L S + A ++ G+RPN Y
Sbjct: 307 KTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYN 366
Query: 476 RVLKHLHTSHQEHMA 490
++ L S Q A
Sbjct: 367 SIMLGLCKSRQTDRA 381
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 100/222 (45%), Gaps = 8/222 (3%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
V +C SGV +++ L EM K ++ V YN+LI +C+ L
Sbjct: 89 VQTTCKESGVGQAMKL-----LDEMRN---KGSKPDVVTYNVLINGICKEGRLDEAIKFL 140
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
M GC+P +T+N +L +C G+ DA +LL +ML + C P +T+ I I + CR
Sbjct: 141 NNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQ 200
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
G A + +M G P ++ + G+ + + A +Y+ + + + Y
Sbjct: 201 GLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTY 260
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ L + K+ +A +L+++ G P + Y V+ L
Sbjct: 261 NTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGL 302
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 78/169 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ +C+ ++L ++ GC P+ +TYN V+ L K G+ A +LL+EM
Sbjct: 260 YNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMR 319
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD ITY + R GK D A FF+ + G++P T+ + + G + +
Sbjct: 320 RKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTD 379
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
A ++ K + Y++L A ++L+E+ GL
Sbjct: 380 RAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 428
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%)
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
+++ + CK A +LL+EM + PD +TY + I C+ G+ D A F N M
Sbjct: 85 FSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMP 144
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPV 453
G QP + TH ++ R+ DA K + K S S + +++L + +
Sbjct: 145 SYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLG 204
Query: 454 MAKNVLSEMMKNGLRPNVSVYRRVL 478
A ++L +M +G PN Y +L
Sbjct: 205 RAIDILEKMPMHGCTPNSLSYNPLL 229
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+S ++ ++ C+ LL EMR G +P +TYN ++ +CK G+ +A + L
Sbjct: 82 LSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLN 141
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
M C P+ IT+ I + C G++ A + M+++G P + T I
Sbjct: 142 NMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILI 194
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 131/299 (43%), Gaps = 33/299 (11%)
Query: 198 CSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTK----KG-IWR 252
CSL+ C D E +L N+ +A G P ++ +L K +G I
Sbjct: 329 CSLINGLCAE-GDVERALELFNE---------AQAKGIKPDIVVYNSLVKGLCLQGLILH 378
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVL--GLYEMAKY----------VIKKTERKVSYYN 300
++V+N++ G I+ ++++ GL +M ++K V +N
Sbjct: 379 ALQVMNEMAEE----GCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFN 434
Query: 301 ILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGR 360
LI C+R L+ M + G P T+TYN VL LCK G+ + E +EM+ +
Sbjct: 435 TLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILK 494
Query: 361 NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
CHP+ ITY I I CR K + A +M + GL P + I G+ E A
Sbjct: 495 GCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGA 554
Query: 421 Y-KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
Y + L Y ++++ +L+ + K N MA+ + EM+ G R + YR ++
Sbjct: 555 YLLFQKLEEKGYSATADTFNTLIGAFSGKLNMH-MAEKIFDEMLSKGHRADSYTYRVLI 612
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI+ +C++ + L M GC P TYN ++ CK +A ELL+
Sbjct: 255 VVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLK 314
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ + + PD +TY I C G + A FN+ +G++P + + + +KG
Sbjct: 315 DAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKG 369
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 87/222 (39%), Gaps = 8/222 (3%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+ G C +S V+ E+ + V K Y LI +C D + +L
Sbjct: 297 IDGYCKISMVQEATEL--------LKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELF 348
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
E + G +P + YN ++ LC G A +++ EM CHPD TY I I C++
Sbjct: 349 NEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKM 408
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
G A N + +G P + T I GY + + A + V + + + Y
Sbjct: 409 GNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITY 468
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + + K EM+ G PN Y ++++
Sbjct: 469 NSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENF 510
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 72/183 (39%), Gaps = 1/183 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNI I+ +C L+ MR P +TYN ++ LCK +A L M+
Sbjct: 224 YNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMM 282
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C PD TY I C++ A V +G P T+ + I G E
Sbjct: 283 NQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVE 342
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + + K ++Y+ L + A V++EM + G P++ Y V+
Sbjct: 343 RALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVI 402
Query: 479 KHL 481
L
Sbjct: 403 NGL 405
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 5/150 (3%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTERKVSY-----YNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LIE F E A VI K ++ + +N LI CR D +G L ++ + G
Sbjct: 506 LIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKG 565
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
T+N ++G A ++ +EML + D+ TY + I SC+ D A+
Sbjct: 566 YSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAY 625
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
+M+K+G P ++T I + +R
Sbjct: 626 MHLVEMIKKGFIPSMSTFGRVINSLTVNHR 655
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 82/186 (44%), Gaps = 1/186 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
++ +N ++ +C+R D LL ++ Q G TYN + LC+ G+ +A L++
Sbjct: 186 LAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVD 245
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M PD +TY I C+ A ++ +M+ +G P T+ I GY
Sbjct: 246 GMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKIS 304
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
++A + + + K + Y L + + A + +E G++P++ VY
Sbjct: 305 MVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYN 364
Query: 476 RVLKHL 481
++K L
Sbjct: 365 SLVKGL 370
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
R L +M P +N VL LCK G +A LL +++ R + TY I+I
Sbjct: 171 RQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRG 230
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
C G+ A + M + P + T+ I+G
Sbjct: 231 LCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRG 264
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 63/148 (42%), Gaps = 1/148 (0%)
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN 390
+ Y V+ L +G DA +L ++ML + P+ + + C+ G A
Sbjct: 151 AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLG 210
Query: 391 QMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNN 450
++++RG+ L T+ +I+G R +A + +V Y + Y+ L K +
Sbjct: 211 KVIQRGMSINLFTYNIWIRGLCEAGRLPEAVR-LVDGMRAYAVPDVVTYNTLIRGLCKKS 269
Query: 451 NPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
P A + L MM G P+ Y ++
Sbjct: 270 MPQEAMHYLRRMMNQGCLPDDFTYNTII 297
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 104/229 (45%), Gaps = 2/229 (0%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKK--TERKVSYYNILIKEMCRR 309
+++EVL G V +I + G A V+ + V YN +++ +C
Sbjct: 158 KILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDS 217
Query: 310 CDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITY 369
K ++L M Q C P +TY ++ C++ A +LL+EM R C PD +TY
Sbjct: 218 GKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTY 277
Query: 370 EIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSAD 429
+ + C+ G+ D A F N M G QP + TH ++ R+ DA K +
Sbjct: 278 NVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLR 337
Query: 430 KYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
K S S + +++L + + A ++L +M K+G +PN Y +L
Sbjct: 338 KGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLL 386
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 87/195 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +NILI +CR+ D+L +M + GC+P +L+YN +L CK + A E LE
Sbjct: 344 VVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLE 403
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+ R C+PD +TY + C+ GK + A NQ+ +G P L T+ I G
Sbjct: 404 RMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAG 463
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ A K + K + YS L + A E + G+RPN +
Sbjct: 464 KTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFN 523
Query: 476 RVLKHLHTSHQEHMA 490
++ L + Q A
Sbjct: 524 SIMLGLCKTRQTDRA 538
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 82/172 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ YN ++ +C+ + ++L ++ GC P+ +TYN V+ L K G+ A +LL+
Sbjct: 414 IVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLD 473
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM ++ PD ITY + R GK D A FF++ + G++P T + + G
Sbjct: 474 EMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTR 533
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
+ + A ++V ++ + Y++L A +L+E+ GL
Sbjct: 534 QTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 12/226 (5%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN+L+ +C+ L +M GC+P +T+N +L +C G+ DA +LL
Sbjct: 274 VVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLA 333
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML + P +T+ I I + CR G A + +M K G QP ++ + G+
Sbjct: 334 DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEK 393
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ + A +Y+ + + Y+ + + K+ A +L+++ G P + Y
Sbjct: 394 KMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYN 453
Query: 476 RVLKHLHTSHQ---------EHMAKCL---SSRYSSLSLGSSVEAR 509
V+ L + + E AK L + YSSL G S E +
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 86/212 (40%), Gaps = 32/212 (15%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG---------------------- 339
LI+ CR + +L + G P +TYN ++
Sbjct: 143 LIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSP 202
Query: 340 ----------VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFF 389
LC +G+ A E+L+ ML R+C+PD ITY I I +CR A
Sbjct: 203 DVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLL 262
Query: 390 NQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKN 449
++M RG P + T+ + G R ++A K++ + + ++++
Sbjct: 263 DEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCST 322
Query: 450 NNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ A+ +L++M++ G P+V + ++ L
Sbjct: 323 GRWMDAEKLLADMLRKGFSPSVVTFNILINFL 354
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 68/166 (40%), Gaps = 9/166 (5%)
Query: 244 ALTKKG-IWRVVEVLNQV---GGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK---- 295
AL K G + VE+LNQ+ G S ++ +I+ + G A ++ + K
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKP 482
Query: 296 -VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
Y+ L+ + R E ++G P +T+N ++ LCK Q A + L
Sbjct: 483 DTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFL 542
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
M+ R C P +Y I I G A N++ +GL R
Sbjct: 543 VYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGLMKR 588
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 76/174 (43%), Gaps = 7/174 (4%)
Query: 303 IKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNC 362
++++ R + + L M G P + ++ C+ G+ A ++LE + G
Sbjct: 109 LRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGA 168
Query: 363 HPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
PD ITY + I C+ G+ + A + ++M + P + T+ ++ + + A +
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 423 YV--VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ +L D Y + Y++L +++ A +L EM G P+V Y
Sbjct: 226 VLDRMLQRDCYPDV--ITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTY 277
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 131/299 (43%), Gaps = 33/299 (11%)
Query: 198 CSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTK----KG-IWR 252
CSL+ C D E +L N+ +A G P ++ +L K +G I
Sbjct: 330 CSLINGLCAE-GDVERALELFNE---------AQAKGIKPDIVVYNSLVKGLCLQGLILH 379
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVL--GLYEMAKY----------VIKKTERKVSYYN 300
++V+N++ G I+ ++++ GL +M ++K V +N
Sbjct: 380 ALQVMNEMAEE----GCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFN 435
Query: 301 ILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGR 360
LI C+R L+ M + G P T+TYN VL LCK G+ + E +EM+ +
Sbjct: 436 TLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILK 495
Query: 361 NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
CHP+ ITY I I CR K + A +M + GL P + I G+ E A
Sbjct: 496 GCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGA 555
Query: 421 Y-KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
Y + L Y ++++ +L+ + K N MA+ + EM+ G R + YR ++
Sbjct: 556 YLLFQKLEEKGYSATADTFNTLIGAFSGKLNMH-MAEKIFDEMLSKGHRADSYTYRVLI 613
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI+ +C++ + L M GC P TYN ++ CK +A ELL+
Sbjct: 256 VVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLK 315
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ + + PD +TY I C G + A FN+ +G++P + + + +KG
Sbjct: 316 DAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKG 370
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 87/222 (39%), Gaps = 8/222 (3%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+ G C +S V+ E+ + V K Y LI +C D + +L
Sbjct: 298 IDGYCKISMVQEATEL--------LKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELF 349
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
E + G +P + YN ++ LC G A +++ EM CHPD TY I I C++
Sbjct: 350 NEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKM 409
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
G A N + +G P + T I GY + + A + V + + + Y
Sbjct: 410 GNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITY 469
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + + K EM+ G PN Y ++++
Sbjct: 470 NSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENF 511
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 72/183 (39%), Gaps = 1/183 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNI I+ +C L+ MR P +TYN ++ LCK +A L M+
Sbjct: 225 YNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMM 283
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C PD TY I C++ A V +G P T+ + I G E
Sbjct: 284 NQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVE 343
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + + K ++Y+ L + A V++EM + G P++ Y V+
Sbjct: 344 RALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVI 403
Query: 479 KHL 481
L
Sbjct: 404 NGL 406
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 5/150 (3%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTERKVSY-----YNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LIE F E A VI K ++ + +N LI CR D +G L ++ + G
Sbjct: 507 LIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKG 566
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
T+N ++G A ++ +EML + D+ TY + I SC+ D A+
Sbjct: 567 YSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAY 626
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
+M+K+G P ++T I + +R
Sbjct: 627 MHLVEMIKKGFIPSMSTFGRVINSLTVNHR 656
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 82/186 (44%), Gaps = 1/186 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
++ +N ++ +C+R D LL ++ Q G TYN + LC+ G+ +A L++
Sbjct: 187 LAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVD 246
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M PD +TY I C+ A ++ +M+ +G P T+ I GY
Sbjct: 247 GMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKIS 305
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
++A + + + K + Y L + + A + +E G++P++ VY
Sbjct: 306 MVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYN 365
Query: 476 RVLKHL 481
++K L
Sbjct: 366 SLVKGL 371
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
R L +M P +N VL LCK G +A LL +++ R + TY I+I
Sbjct: 172 RQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRG 231
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
C G+ A + M + P + T+ I+G
Sbjct: 232 LCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRG 265
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 63/148 (42%), Gaps = 1/148 (0%)
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN 390
+ Y V+ L +G DA +L ++ML + P+ + + C+ G A
Sbjct: 152 AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLG 211
Query: 391 QMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNN 450
++++RG+ L T+ +I+G R +A + +V Y + Y+ L K +
Sbjct: 212 KVIQRGMSINLFTYNIWIRGLCEAGRLPEAVR-LVDGMRAYAVPDVVTYNTLIRGLCKKS 270
Query: 451 NPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
P A + L MM G P+ Y ++
Sbjct: 271 MPQEAMHYLRRMMNQGCLPDDFTYNTII 298
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 88/195 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +NILI +CR+ D+L +M GC P +L+YN +L CK + A E L+
Sbjct: 299 VVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLD 358
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+ R C+PD +TY + C+ GK DVA NQ+ +G P L T+ I G
Sbjct: 359 IMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVG 418
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ E A K + K + YS L S + A ++ G+RPN Y
Sbjct: 419 KTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYN 478
Query: 476 RVLKHLHTSHQEHMA 490
++ L S Q A
Sbjct: 479 SIMLGLCKSRQTDRA 493
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 104/235 (44%), Gaps = 3/235 (1%)
Query: 246 TKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKK--TERKVSYYNILI 303
TKK W V+E+L Q G V LI + G + A V+ + V YN ++
Sbjct: 108 TKKATW-VMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTIL 166
Query: 304 KEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH 363
+ +C K ++L Q C P +TY ++ CK A +LL+EM +
Sbjct: 167 RTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSK 226
Query: 364 PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY 423
PD +TY + I C+ G+ D A F N M G QP + TH ++ R+ DA K
Sbjct: 227 PDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKL 286
Query: 424 VVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ K S S + +++L + + A ++L +M +G PN Y +L
Sbjct: 287 LSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLL 341
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 99/232 (42%), Gaps = 12/232 (5%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K ++ V YN+LI +C+ L M GC+P +T+N +L +C G+ D
Sbjct: 223 KGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMD 282
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A +LL +ML + C P +T+ I I + CR G A + +M G P ++ +
Sbjct: 283 AEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLH 342
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
G+ + + A +Y+ + + + Y+ L + K+ +A +L+++ G P
Sbjct: 343 GFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSP 402
Query: 470 NVSVYRRVLKHL-HTSHQEHMAKCLSS-----------RYSSLSLGSSVEAR 509
+ Y V+ L E K L YSSL G S E +
Sbjct: 403 VLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGK 454
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 79/172 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ YN L+ +C+ ++L ++ GC P+ +TYN V+ L K G+ A +LL+
Sbjct: 369 IVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLD 428
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM + PD ITY + R GK D A FF+ + G++P T+ + + G
Sbjct: 429 EMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSR 488
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
+ + A ++ K + Y++L A ++L+E+ GL
Sbjct: 489 QTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 540
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 91/213 (42%), Gaps = 34/213 (15%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM---- 357
LI+ CR K ++ + Q G P +TYN ++ CK+G+ +A ++L+ M
Sbjct: 98 LIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMNVAP 157
Query: 358 ----------------------------LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFF 389
L + C+PD ITY I I +C+ A
Sbjct: 158 DVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLL 217
Query: 390 NQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML-YSLLASLHDK 448
++M +G +P + T+ I G R ++A K++ + Y N++ ++++
Sbjct: 218 DEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLN-NMPSYGCQPNVITHNIILRSMCS 276
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ A+ +LS+M++ G P+V + ++ L
Sbjct: 277 TGRWMDAEKLLSDMLRKGCSPSVVTFNILINFL 309
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 77/175 (44%), Gaps = 9/175 (5%)
Query: 244 ALTKKGIWRV-VEVLNQV---GGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK---- 295
AL K G V VE+LNQ+ G S ++ +I+ S +G E A ++ + RK
Sbjct: 378 ALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKP 437
Query: 296 -VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
+ Y+ L+ + R ++ +G P +TYN ++ LCK+ Q A + L
Sbjct: 438 DIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFL 497
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
M+ + C P TY I I G A + N++ RGL + + +K
Sbjct: 498 AYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVAVK 552
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 88/195 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +NILI +CR+ D+L +M GC P +L+YN +L CK + A E L+
Sbjct: 356 VVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLD 415
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+ R C+PD +TY + C+ GK DVA NQ+ +G P L T+ I G
Sbjct: 416 IMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVG 475
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ E A K + K + YS L S + A ++ G+RPN Y
Sbjct: 476 KTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYN 535
Query: 476 RVLKHLHTSHQEHMA 490
++ L S Q A
Sbjct: 536 SIMLGLCKSRQTDRA 550
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 104/235 (44%), Gaps = 3/235 (1%)
Query: 246 TKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKK--TERKVSYYNILI 303
TKK W V+E+L Q G V LI + G + A V+ + V YN ++
Sbjct: 165 TKKATW-VMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTIL 223
Query: 304 KEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH 363
+ +C K ++L Q C P +TY ++ CK A +LL+EM +
Sbjct: 224 RTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSK 283
Query: 364 PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY 423
PD +TY + I C+ G+ D A F N M G QP + TH ++ R+ DA K
Sbjct: 284 PDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKL 343
Query: 424 VVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ K S S + +++L + + A ++L +M +G PN Y +L
Sbjct: 344 LSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLL 398
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 99/232 (42%), Gaps = 12/232 (5%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K ++ V YN+LI +C+ L M GC+P +T+N +L +C G+ D
Sbjct: 280 KGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMD 339
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A +LL +ML + C P +T+ I I + CR G A + +M G P ++ +
Sbjct: 340 AEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLH 399
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
G+ + + A +Y+ + + + Y+ L + K+ +A +L+++ G P
Sbjct: 400 GFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSP 459
Query: 470 NVSVYRRVLKHL-HTSHQEHMAKCLSS-----------RYSSLSLGSSVEAR 509
+ Y V+ L E K L YSSL G S E +
Sbjct: 460 VLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGK 511
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 78/169 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ +C+ ++L ++ GC P+ +TYN V+ L K G+ A +LL+EM
Sbjct: 429 YNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMR 488
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD ITY + R GK D A FF+ + G++P T+ + + G + +
Sbjct: 489 RKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTD 548
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
A ++ K + Y++L A ++L+E+ GL
Sbjct: 549 RAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 597
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 91/213 (42%), Gaps = 34/213 (15%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM---- 357
LI+ CR K ++ + Q G P +TYN ++ CK+G+ +A ++L+ M
Sbjct: 155 LIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMNVAP 214
Query: 358 ----------------------------LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFF 389
L + C+PD ITY I I +C+ A
Sbjct: 215 DVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLL 274
Query: 390 NQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML-YSLLASLHDK 448
++M +G +P + T+ I G R ++A K++ + Y N++ ++++
Sbjct: 275 DEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLN-NMPSYGCQPNVITHNIILRSMCS 333
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ A+ +LS+M++ G P+V + ++ L
Sbjct: 334 TGRWMDAEKLLSDMLRKGCSPSVVTFNILINFL 366
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 77/175 (44%), Gaps = 9/175 (5%)
Query: 244 ALTKKGIWRV-VEVLNQV---GGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK---- 295
AL K G V VE+LNQ+ G S ++ +I+ S +G E A ++ + RK
Sbjct: 435 ALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKP 494
Query: 296 -VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
+ Y+ L+ + R ++ +G P +TYN ++ LCK+ Q A + L
Sbjct: 495 DIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFL 554
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
M+ + C P TY I I G A + N++ RGL + + +K
Sbjct: 555 AYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVAVK 609
>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 624
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 124/283 (43%), Gaps = 12/283 (4%)
Query: 209 DDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQ-VGGSCL-- 265
D +E +LL + L++ F L L RV+E+L Q + C+
Sbjct: 315 DRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVD----RVIELLEQMLEHGCMPD 370
Query: 266 VSGVRALIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNILIKEMCRRCDFKGPRDLLV 320
V +I F GL + A ++K + Y I++K +C + +L+
Sbjct: 371 VITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMS 430
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
M Q GC P +T+N ++ LCK G A ELL++ML C+PD I+Y I + G
Sbjct: 431 RMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAG 490
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
K + A N M+ +G+ P + T+++ R + + D S +LY+
Sbjct: 491 KTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYN 550
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHT 483
+ S K +A + L+ M+ NG PN S Y ++K L +
Sbjct: 551 AVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLAS 593
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ Y +I +C+ + ++L M G +P + YN VL +C + A ELL
Sbjct: 266 IRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLT 325
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM +NC D +T+ I + + C+ G D QM++ G P + T+ I G+
Sbjct: 326 EMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEG 385
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
++A + + + Y+++ V A+ ++S M++ G PN +
Sbjct: 386 LIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFN 445
Query: 476 RVLKHL 481
++ L
Sbjct: 446 TIINFL 451
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 123/291 (42%), Gaps = 27/291 (9%)
Query: 207 RLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKG-IWRVVEVLNQVGG-SC 264
R+ E R+L V + A+ + PV+ + L +G I + VL+++ SC
Sbjct: 96 RVGQVEAARRL-----AAAVPVPPNAYTYFPVV---RGLCGRGRIADALAVLDEMTSRSC 147
Query: 265 --LVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYY-----NILIKEMCRRCDFKGPRD 317
+ +IE G Y A V++ K S N++I +C + +
Sbjct: 148 VPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLE 207
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG----------RNCHPDAI 367
+L ++ GCE ++YN VL LC + D EL++EM+ C PD
Sbjct: 208 MLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIR 267
Query: 368 TYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLS 427
Y I C+ G +VA ++M GL+P + + +KG R+E A + +
Sbjct: 268 MYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEM 327
Query: 428 ADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
K ++ +++L +N +L +M+++G P+V Y V+
Sbjct: 328 YQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVI 378
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 108/270 (40%), Gaps = 13/270 (4%)
Query: 234 GFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTE 293
G L LI S + + V L+ G + V A++ + +G E A+ +
Sbjct: 53 GRLSALIRSLCVAGR-TADAVRALDAAGNAAGVVDYNAMVAGYCRVGQVEAARRLAAAVP 111
Query: 294 RKVSYYNI--LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADAC 351
+ Y +++ +C R +L EM C PI Y+ ++ C++G + A
Sbjct: 112 VPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSAL 171
Query: 352 ELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
+LE + + D + I C G D ++ G + + ++ A +KG
Sbjct: 172 RVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGL 231
Query: 412 FIFYRYEDAYKYVVLSADKYKSSSNM----------LYSLLASLHDKNNNPVMAKNVLSE 461
R+ D + + +++ S M +Y+ + K + +A +LS
Sbjct: 232 CAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSR 291
Query: 462 MMKNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
M GL+PNV Y VLK + ++ + A+
Sbjct: 292 MPSYGLKPNVVCYNTVLKGICSADRWEKAE 321
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 90/183 (49%), Gaps = 4/183 (2%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L+ +M + GC+P +TY VL V+CK+GQ A A ELL +M RN DA+ Y I I C
Sbjct: 313 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 372
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ G D AFN FN+M +G+ + T+ I G+ R++D K + + + + +
Sbjct: 373 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 432
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL----KHLHTSHQEHMAKCL 493
+S+L K A+ + EM+ G+ P+ Y ++ K H M +
Sbjct: 433 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 492
Query: 494 SSR 496
S+
Sbjct: 493 VSK 495
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 5/137 (3%)
Query: 280 GLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
G +A +++K E + Y+I+I +C+ +L EM G +TY
Sbjct: 340 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITY 399
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N ++G C G+ D +LL +M+ R +P+ +T+ + I + GK A +M+
Sbjct: 400 NILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIH 459
Query: 395 RGLQPRLATHAAFIKGY 411
RG+ P T+ + I G+
Sbjct: 460 RGIAPDTITYTSLIDGF 476
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 50/112 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI C+ ++ M GC+P T+N ++ CK + D EL +M
Sbjct: 469 YTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMS 528
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
R D +TY I C +GK +VA F +MV R + P + T+ + G
Sbjct: 529 LRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDG 580
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 92/232 (39%), Gaps = 8/232 (3%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+ G C + + +E+F + L + V+ T YN LI+ C ++L
Sbjct: 508 INGYCKANRIDDGLELFRKMSL----RGVVADT----VTYNTLIQGFCELGKLNVAKELF 559
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
EM P +TY +L LC NG+ A E+ E++ D Y I I C
Sbjct: 560 QEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA 619
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
K D A++ F + +G++P + T+ I G +A + + Y
Sbjct: 620 SKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTY 679
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
++L H + + + ++ E+ + G + S + V+ L + +K
Sbjct: 680 NILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDDKANYFSK 731
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
+K V +++LI + + +L EM G P T+TY ++ CK
Sbjct: 425 RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDK 484
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A ++++ M+ + C P+ T+ I I C+ + D F +M RG+ T+ I+
Sbjct: 485 ANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQ 544
Query: 410 GY 411
G+
Sbjct: 545 GF 546
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 74/176 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ++ MC+ +LL +M + + + Y+ ++ LCK+G +A L EM
Sbjct: 329 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEME 388
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ + ITY I I C G++D M+KR + P + T + I + +
Sbjct: 389 MKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLR 448
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+A + + + + Y+ L K N+ A ++ M+ G PN+ +
Sbjct: 449 EAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTF 504
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 63/134 (47%)
Query: 288 VIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQD 347
V K + + +NILI C+ +L +M G T+TYN ++ C+ G+
Sbjct: 493 VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 552
Query: 348 ADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAF 407
A EL +EM+ R P+ +TY+I + C G+ + A F ++ K ++ + +
Sbjct: 553 NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNII 612
Query: 408 IKGYFIFYRYEDAY 421
I G + +DA+
Sbjct: 613 IHGMCNASKVDDAW 626
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 90/183 (49%), Gaps = 4/183 (2%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L+ +M + GC+P +TY VL V+CK+GQ A A ELL +M RN DA+ Y I I C
Sbjct: 215 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ G D AFN FN+M +G+ + T+ I G+ R++D K + + + + +
Sbjct: 275 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 334
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL----KHLHTSHQEHMAKCL 493
+S+L K A+ + EM+ G+ P+ Y ++ K H M +
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 394
Query: 494 SSR 496
S+
Sbjct: 395 VSK 397
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 5/137 (3%)
Query: 280 GLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
G +A +++K E + Y+I+I +C+ +L EM G +TY
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITY 301
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N ++G C G+ D +LL +M+ R +P+ +T+ + I + GK A +M+
Sbjct: 302 NILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIH 361
Query: 395 RGLQPRLATHAAFIKGY 411
RG+ P T+ + I G+
Sbjct: 362 RGIAPDTITYTSLIDGF 378
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 50/112 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI C+ ++ M GC+P T+N ++ CK + D EL +M
Sbjct: 371 YTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMS 430
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
R D +TY I C +GK +VA F +MV R + P + T+ + G
Sbjct: 431 LRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDG 482
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 79/202 (39%)
Query: 280 GLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
GL K ++ YN LI+ C ++L EM P +TY +L
Sbjct: 422 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLD 481
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
LC NG+ A E+ E++ D Y I I C K D A++ F + +G++P
Sbjct: 482 GLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 541
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
+ T+ I G +A + + Y++L H + + + ++
Sbjct: 542 GVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLI 601
Query: 460 SEMMKNGLRPNVSVYRRVLKHL 481
E+ + G + S + V+ L
Sbjct: 602 EELKRCGFSVDASTIKMVIDML 623
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
+K V +++LI + + +L EM G P T+TY ++ CK
Sbjct: 327 RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDK 386
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A ++++ M+ + C P+ T+ I I C+ + D F +M RG+ T+ I+
Sbjct: 387 ANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQ 446
Query: 410 GY 411
G+
Sbjct: 447 GF 448
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 74/176 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ++ MC+ +LL +M + + + Y+ ++ LCK+G +A L EM
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEME 290
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ + ITY I I C G++D M+KR + P + T + I + +
Sbjct: 291 MKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLR 350
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+A + + + + Y+ L K N+ A ++ M+ G PN+ +
Sbjct: 351 EAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTF 406
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 63/134 (47%)
Query: 288 VIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQD 347
V K + + +NILI C+ +L +M G T+TYN ++ C+ G+
Sbjct: 395 VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 454
Query: 348 ADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAF 407
A EL +EM+ R P+ +TY+I + C G+ + A F ++ K ++ + +
Sbjct: 455 NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNII 514
Query: 408 IKGYFIFYRYEDAY 421
I G + +DA+
Sbjct: 515 IHGMCNASKVDDAW 528
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 126/298 (42%), Gaps = 23/298 (7%)
Query: 195 SDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIW--R 252
S + LV+ +C R++ + + L+ N+ K++GF+P ++S A+ I +
Sbjct: 132 SAVFDLVVKSCARVN---LINKALSIVNL------AKSYGFMPGVLSYNAILDAVIRTKQ 182
Query: 253 VVEVLNQVGGSCLVSGV-------RALIEMFSVLGLYEMAKYVIKKTERK-----VSYYN 300
V++ + + SGV LI F G EM + + ER V YN
Sbjct: 183 SVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYN 242
Query: 301 ILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGR 360
+I C+ LL M G P ++YN V+ LC+ GQ + E+LEEM R
Sbjct: 243 TIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKR 302
Query: 361 NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
PD +T+ I C VG F A +MVK GL P + T+ I A
Sbjct: 303 RYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRA 362
Query: 421 YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+++ D+ + Y+ L + A ++ EM++NG P + Y ++
Sbjct: 363 MEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALI 420
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 83/183 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N LI C +F L EM + G P +TY ++ +CK G A E L++M
Sbjct: 311 FNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMR 370
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R HP+ TY I + G A+ +MV+ G P + T+ A I G+ I R E
Sbjct: 371 DRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRME 430
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA + ++ + YS + S +N A + EM+ G+ P+V+ Y ++
Sbjct: 431 DASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLI 490
Query: 479 KHL 481
+ L
Sbjct: 491 QGL 493
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 116/256 (45%), Gaps = 21/256 (8%)
Query: 248 KGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKK-TER----KVSYYNIL 302
K +++++ + + G + + ALI +LG E A ++++ ER V Y+ +
Sbjct: 395 KQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTI 454
Query: 303 IKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNC 362
I CR + + L VEM G P TY+ ++ LCK + + C+L +EML
Sbjct: 455 ISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGL 514
Query: 363 HPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
PD +TY I C G D A ++M+++G P + T+ I G+ R ++A +
Sbjct: 515 PPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKR 574
Query: 423 YVVLSADKYKSSSNMLYSLLA----SLHDKNNNPVM-----------AKNVLSEMMKNGL 467
++ + + + Y+ L +L K+ +M A VL M++ G
Sbjct: 575 LLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGY 634
Query: 468 RPNVSVYRRVLKHLHT 483
+ N VY V+ H H+
Sbjct: 635 KLNEEVY-NVIIHGHS 649
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 110/247 (44%), Gaps = 17/247 (6%)
Query: 269 VRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCE 328
+R + E F +L L MA +K + YN++I +CR K ++L EM +
Sbjct: 251 LRKIGEAFKLLRL--MA---LKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYV 305
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P +T+N ++ C G A L EM+ P+ +TY I C+ G + A F
Sbjct: 306 PDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEF 365
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
+QM RGL P T+ I G+ + AY+ + + + + + Y+ L + H
Sbjct: 366 LDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCI 425
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYRRVL------KHLHTSHQ---EHMAKCLS---SR 496
A +L EM++ G P+V Y ++ + L + Q E +AK +S +
Sbjct: 426 LGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVAT 485
Query: 497 YSSLSLG 503
YSSL G
Sbjct: 486 YSSLIQG 492
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 86/217 (39%), Gaps = 37/217 (17%)
Query: 302 LIKEMCRRCDFKGPRDLLVEM-RQVGCEPITLTYNYVLGVLCKNGQDADACE-LLEEMLG 359
L+ + C R + +V + + G P L+YN +L + + Q E + +EM+
Sbjct: 137 LVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVE 196
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
P+ TY I I C G ++ FF +M + G P + T+ I Y + +
Sbjct: 197 SGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGE 256
Query: 420 AYKYVVLSADK---------------------YKSSSNML--------------YSLLAS 444
A+K + L A K K +S +L ++ L +
Sbjct: 257 AFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLIN 316
Query: 445 LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ N A + +EM+KNGL PNV Y ++ +
Sbjct: 317 GYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSM 353
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 75/186 (40%), Gaps = 15/186 (8%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG---------------VLCK 343
YN+LI ++ K + LL+++ P +TYN ++ C
Sbjct: 556 YNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCM 615
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
G +A +LE ML + + Y + I +VG + A+N + +M+ G P T
Sbjct: 616 KGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVT 675
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
A K + + + + + + + + L +L ++ K N NVL +M
Sbjct: 676 IMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGNMDAVFNVLKDMA 735
Query: 464 KNGLRP 469
+GL P
Sbjct: 736 LSGLLP 741
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 89/183 (48%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I +C+ + LL MR+ G P + Y V+ CK G + AC+L +EM
Sbjct: 315 YNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMR 374
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD +TY I C+ GK A FN+M+ +GL+P T+ A I GY +
Sbjct: 375 RKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMK 434
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A+ K + + + Y+ LA KN +A +L EM + GL+PNV Y ++
Sbjct: 435 EAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIV 494
Query: 479 KHL 481
L
Sbjct: 495 NGL 497
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 94/222 (42%), Gaps = 2/222 (0%)
Query: 258 NQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRD 317
++V + L+ G EM ++ + V K V Y L +C+ + +
Sbjct: 416 DEVTYTALIDGYCKAGEMKEAFSVHN--QMVQKGLTPNVVTYTALADGLCKNGEIDVANE 473
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
LL EM + G +P TYN ++ LCK G +L+EEM +PD ITY + C
Sbjct: 474 LLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYC 533
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
++G+ A M+ + LQP L T + G+ + ED + + +K +
Sbjct: 534 KMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNAT 593
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
++ L + NN + M G+ P+ + Y ++K
Sbjct: 594 TFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIK 635
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 98/234 (41%), Gaps = 8/234 (3%)
Query: 247 KKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEM 306
KK + +V + + G C + EMF+ EM ++K E Y LI
Sbjct: 376 KKIVPDIVTYTSVIHGICKSGKMVEAREMFN-----EM---LVKGLEPDEVTYTALIDGY 427
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
C+ + K + +M Q G P +TY + LCKNG+ A ELL EM + P+
Sbjct: 428 CKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNV 487
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
TY + C++G + +M G P T+ + Y A++ + +
Sbjct: 488 YTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRI 547
Query: 427 SADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKH 480
+K + + +++L + + + ++ M++ G+ PN + + ++K
Sbjct: 548 MLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQ 601
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 93/229 (40%), Gaps = 38/229 (16%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L+EM++ K + V YN ++ +C+ + + L+ EM G P T+TY ++
Sbjct: 475 LHEMSR---KGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDA 531
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
CK G+ A A ELL ML + P +T+ + + C G + M+++G+ P
Sbjct: 532 YCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPN 591
Query: 401 LATHAAFIKGYFI---------FYR-------YEDAYKYVVLSADK------------YK 432
T + +K Y I Y+ D+ Y +L +K
Sbjct: 592 ATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHK 651
Query: 433 SSSNMLYSLLASLHD-------KNNNPVMAKNVLSEMMKNGLRPNVSVY 474
YS+ A+ +D K V A+ + EM K+GL +Y
Sbjct: 652 EMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIY 700
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 93/218 (42%), Gaps = 16/218 (7%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
NI++ +C+ + +LLV+M G P ++Y V+ C+ G+ +L++E+ G
Sbjct: 246 NIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKG 305
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
+ PD Y I+ C+ G+ A M K G+ P + I G+
Sbjct: 306 KGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSA 365
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHD--KNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
A K + + K + + + +H K+ V A+ + +EM+ GL P+ Y +
Sbjct: 366 ACK--LFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTAL 423
Query: 478 ---------LKHLHTSHQEHMAKCLSSR---YSSLSLG 503
+K + H + + K L+ Y++L+ G
Sbjct: 424 IDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADG 461
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 38/172 (22%)
Query: 310 CDFKGPR---DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
C+F+G + + E ++G T++ N VL LC+ G+ +A LL +M R PD
Sbjct: 218 CNFEGIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDV 277
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
++Y + + CR+G+ D +++ +GL+P
Sbjct: 278 VSYGVVVSGYCRIGELDKVLKLVDELKGKGLKP--------------------------- 310
Query: 427 SADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
D+Y +Y+ + L KN V A+ +L M K G+ P+ VY V+
Sbjct: 311 --DEY------IYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVI 354
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 90/182 (49%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N ++ +C + DL+ M GC+P TY +L +CK+G A A +LL +M
Sbjct: 199 NTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEH 258
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
R P +TY I I C+ G+ D A +FF++M +G++ + T+ + I + F R++D
Sbjct: 259 RKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDD 318
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
+ + + + + + +S L K AK++ +EM+ G+ PN Y ++
Sbjct: 319 GAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIY 378
Query: 480 HL 481
L
Sbjct: 379 GL 380
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 91/227 (40%), Gaps = 35/227 (15%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
+K + V Y I+I +C+ EM G + TYN ++G C G+ D
Sbjct: 259 RKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDD 318
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
+LL +M+ R P+ +T+ I + GK A + +N+M+ RG++P T+ + I
Sbjct: 319 GAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIY 378
Query: 410 GYFIFYRYEDA----------------YKYVVLSADKYKS-------------------S 434
G R ++A + Y +L K+ +
Sbjct: 379 GLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIA 438
Query: 435 SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ YS L ++ ++AK V EM+ G+ P + Y +L L
Sbjct: 439 DTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGL 485
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 94/216 (43%), Gaps = 5/216 (2%)
Query: 271 ALIEMFSVLGLYE-----MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
+LI F G ++ + + +K V ++ LI + + +DL EM
Sbjct: 305 SLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITR 364
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G EP T+TYN ++ LC + + +A ++++ M+ + C PD TY I I C+ + D
Sbjct: 365 GIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDG 424
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
F +M RG+ T++ I+G+ + A K + M Y++L
Sbjct: 425 MRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDG 484
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
N A +L +M K + ++ +Y ++ +
Sbjct: 485 LCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGM 520
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 127/305 (41%), Gaps = 27/305 (8%)
Query: 206 GRLDDYETMRQLLNDFNVYQVCLNEKAFGFL-------PVLISSKALTKKGIWRVVEVLN 258
GR DD QLL D ++ N F L L +K L + I R +E N
Sbjct: 314 GRWDDGA---QLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEP-N 369
Query: 259 QVGGSCLVSGV---RALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGP 315
+ + L+ G+ + L E ++ L V K + + YNILI C+
Sbjct: 370 TITYNSLIYGLCNDKRLDEANQMMDLM-----VSKGCDPDIWTYNILINGFCKAKQVDDG 424
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
L +M G T+TY+ ++ C++ + A ++ +EM+ + HP +TY I +
Sbjct: 425 MRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDG 484
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
C G+ + A +QM K ++ + + I G + +DA+ K
Sbjct: 485 LCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRD 544
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK-HLH-----TSHQ--E 487
Y+++ S K ++ A + +M ++G P+ Y +++ HL TS Q E
Sbjct: 545 IQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIE 604
Query: 488 HMAKC 492
M +C
Sbjct: 605 EMKRC 609
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 66/157 (42%), Gaps = 14/157 (8%)
Query: 230 EKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVI 289
E+A G L + K GI+ ++ + G C + V +F L
Sbjct: 492 EEALGILDQMHKCKMELDIGIYNII-----IHGMCNANKVDDAWSLFCSLP--------S 538
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K +R + YNI++ +C+R L +M++ G EP TYN ++ +
Sbjct: 539 KGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITT 598
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
+ +L+EEM DA T +I ++ G+ D +F
Sbjct: 599 SVQLIEEMKRCGFSSDASTVKI-VMDMLSSGELDKSF 634
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 6/156 (3%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P + +N + G+L + Q L ++M + D T I I CR K AF+
Sbjct: 88 PTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSA 147
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV---VLSADKYKSSSNMLYSLLASL 445
++ K G +P T + G + R +A + V VLS ++ L +++ L
Sbjct: 148 MGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLS--QHVPDLITLNTIVNGL 205
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K+ A ++++ MM NG +PN Y +L +
Sbjct: 206 CLKDRVS-EAVDLIARMMANGCQPNQFTYGPILNRM 240
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 41/113 (36%)
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
K E + YNI+I MC L + G + +YN +L LCK ++A
Sbjct: 505 KMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEA 564
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
L +M PD TY I R + +M + G +T
Sbjct: 565 DALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDAST 617
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 93/182 (51%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
NILI +CR +L +M ++G +P ++T+ ++ LC G+ +A EL EM G
Sbjct: 125 NILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAG 184
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
R+ P+ +T+ I + C+ G A F M ++G++P + T+ A + GY + D
Sbjct: 185 RDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMND 244
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
A K + K + S YS+L + + K+ AK +L++M + L PN Y +++
Sbjct: 245 ASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQ 304
Query: 480 HL 481
L
Sbjct: 305 GL 306
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 2/193 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L++ +C ++L +M G P TY+ +L LCK+G +A +LL M
Sbjct: 299 YNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQ 358
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R PD + Y I I GK +VA F+++ G++P + T+ IKG +
Sbjct: 359 ERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSD 418
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+AYK D + Y+++ +N +P A ++ EM+ + S ++ +L
Sbjct: 419 EAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLL 478
Query: 479 KHLHTSHQEHMAK 491
SH E +++
Sbjct: 479 D--LESHDEIISR 489
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 100/240 (41%), Gaps = 8/240 (3%)
Query: 250 IWRVVEVLNQVGGSCLVSGVRALIEMFSVL---GLYEMAKYVI-----KKTERKVSYYNI 301
I VE+ N++ G + + VL G+ A+ V K E + YN
Sbjct: 172 IKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNA 231
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
L+ C R + + M GC P +Y+ ++ CK+ + +A LL +M +
Sbjct: 232 LMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKE 291
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
P+ +TY + C A F +M G+ P L T++ + G E+A
Sbjct: 292 LIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEAL 351
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K + ++ +LY++L +AK + S++ NG+RP+V Y ++K L
Sbjct: 352 KLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGL 411
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 107/245 (43%), Gaps = 24/245 (9%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+ G C ++ +E+F+ EMA + + IL+ +C++ R +
Sbjct: 163 INGLCNEGRIKEAVELFN-----EMAG---RDAMPNTVTFTILVDVLCKKGMVSEARCVF 214
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
M + G EP TYN ++ C + DA ++ E M+G+ C P +Y I I C+
Sbjct: 215 ETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKS 274
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSAD---KYKSSSN 436
+ D A QM ++ L P T+ ++G + +L A K SS
Sbjct: 275 RRIDEAKALLTQMSEKELIPNTVTYNTLMQGL--------CHASSLLEAQELFKKMCSSG 326
Query: 437 ML-----YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
ML YS+L K+ + A +L+ M + L P++ +Y +++ + + + +AK
Sbjct: 327 MLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAK 386
Query: 492 CLSSR 496
L S+
Sbjct: 387 ELFSK 391
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 1/198 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ LI +C K +L EM P T+T+ ++ VLCK G ++A + E M
Sbjct: 159 FTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMT 218
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+ TY + C + + A F MV +G P + +++ I GY R +
Sbjct: 219 EKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRID 278
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + ++K + + Y+ L ++ + A+ + +M +G+ PN+ Y +L
Sbjct: 279 EAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILL 338
Query: 479 KHL-HTSHQEHMAKCLSS 495
L H E K L+S
Sbjct: 339 DGLCKHGHLEEALKLLTS 356
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 47/106 (44%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
+K E + YNILI+ M + ++L ++ G P TYN ++ L K G +
Sbjct: 360 RKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDE 419
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR 395
A +L +M PD+ +Y + I + A ++MV R
Sbjct: 420 AYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGR 465
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 57/141 (40%)
Query: 338 LGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
LG + K Q + L +M + T I I CR+ A + ++M K G+
Sbjct: 93 LGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGI 152
Query: 398 QPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKN 457
QP T I G R ++A + A + + + +++L + K A+
Sbjct: 153 QPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARC 212
Query: 458 VLSEMMKNGLRPNVSVYRRVL 478
V M + G+ PN+ Y ++
Sbjct: 213 VFETMTEKGVEPNIYTYNALM 233
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 129/296 (43%), Gaps = 33/296 (11%)
Query: 198 CSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTK----KG-IWR 252
CSL+ C D E +L N+ +A G P ++ +L K +G I
Sbjct: 332 CSLINGLCAE-GDVERALELFNE---------AQAKGIKPDIVVYNSLVKGLCLQGLILH 381
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVL--GLYEMAKY----------VIKKTERKVSYYN 300
++V+N++ G I+ ++++ GL +M ++K V +N
Sbjct: 382 ALQVMNEMAEE----GCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFN 437
Query: 301 ILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGR 360
LI C+R L+ M + G P T+TYN VL LCK G+ + E +EM+ +
Sbjct: 438 TLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILK 497
Query: 361 NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
CHP+ ITY I I CR K + A +M + GL P + I G+ E A
Sbjct: 498 GCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGA 557
Query: 421 Y-KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
Y + L Y ++++ +L+ + K N MA+ + EM+ G R + YR
Sbjct: 558 YLLFQKLEEKGYSATADTFNTLIGAFSGKLNMH-MAEKIFDEMLSKGHRADSYTYR 612
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI+ +C++ + L M GC P TYN ++ CK +A ELL+
Sbjct: 258 VVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLK 317
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ + + PD +TY I C G + A FN+ +G++P + + + +KG
Sbjct: 318 DAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKG 372
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 72/183 (39%), Gaps = 1/183 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNI I+ +C L+ MR P +TYN ++ LCK +A L M+
Sbjct: 227 YNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMM 285
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C PD TY I C++ A V +G P T+ + I G E
Sbjct: 286 NQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVE 345
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + + K ++Y+ L + A V++EM + G P++ Y V+
Sbjct: 346 RALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVI 405
Query: 479 KHL 481
L
Sbjct: 406 NGL 408
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 63/138 (45%), Gaps = 4/138 (2%)
Query: 283 EMAKYVIKKTERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
E +K ++K ++ + +N LI CR D +G L ++ + G T+N ++
Sbjct: 521 EASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLI 580
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
G A ++ +EML + D+ TY + I SC+ D A+ +M+K+G
Sbjct: 581 GAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFI 640
Query: 399 PRLATHAAFIKGYFIFYR 416
P ++T I + +R
Sbjct: 641 PSMSTFGRVINSLTVNHR 658
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 82/186 (44%), Gaps = 1/186 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
++ +N ++ +C+R D LL ++ Q G TYN + LC+ G+ +A L++
Sbjct: 189 LAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVD 248
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M PD +TY I C+ A ++ +M+ +G P T+ I GY
Sbjct: 249 GMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKIS 307
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
++A + + + K + Y L + + A + +E G++P++ VY
Sbjct: 308 MVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYN 367
Query: 476 RVLKHL 481
++K L
Sbjct: 368 SLVKGL 373
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
R L +M P +N VL LCK G +A LL +++ R + TY I+I
Sbjct: 174 RQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRG 233
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
C G+ A + M + P + T+ I+G
Sbjct: 234 LCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRG 267
Score = 38.5 bits (88), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 63/148 (42%), Gaps = 1/148 (0%)
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN 390
+ Y V+ L +G DA +L ++ML + P+ + + C+ G A
Sbjct: 154 AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLG 213
Query: 391 QMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNN 450
++++RG+ L T+ +I+G R +A + +V Y + Y+ L K +
Sbjct: 214 KVIQRGMSINLFTYNIWIRGLCEAGRLPEAVR-LVDGMRAYAVPDVVTYNTLIRGLCKKS 272
Query: 451 NPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
P A + L MM G P+ Y ++
Sbjct: 273 MPQEAMHYLRRMMNQGCLPDDFTYNTII 300
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 120/265 (45%), Gaps = 8/265 (3%)
Query: 246 TKKGIWRVVEVLNQVGGSCLVSGV---RALIEMFSVLGLYEMAKYVIKKTERK-----VS 297
+K I V++ +++G + +I+ +G A ++KK E K V
Sbjct: 153 SKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVV 212
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
YN +I +C+ EM G P +TY+ +L C GQ +A L ++M
Sbjct: 213 AYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQM 272
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
+GRN P+ +T+ I + C+ G A F M + G++P T++A + GY + +
Sbjct: 273 IGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQM 332
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
++A K + K + S +Y++L + H K+ AK +LSEM L P+ Y +
Sbjct: 333 DEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTL 392
Query: 478 LKHLHTSHQEHMAKCLSSRYSSLSL 502
++ + + +A+ L S L
Sbjct: 393 MQGFCQAGRPQVAQKLFKEMCSYGL 417
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 8/218 (3%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
G CL S + ++F ++ V K V YNILI C+ + LL E
Sbjct: 325 GYCLQSQMDEAQKLFDIM--------VGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSE 376
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M P T+TY+ ++ C+ G+ A +L +EM PD+ITY I + C+ G
Sbjct: 377 MYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGH 436
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
D AF M + ++P + + I+G F + E A + K S + Y++
Sbjct: 437 LDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTV 496
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
+ S K A + +M+ NG PN Y ++
Sbjct: 497 MISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQ 534
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%)
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
K E + YNILI+ MC + R+L + G +P +TY ++ L K G +A
Sbjct: 451 KIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEA 510
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
CE+ +M+ C P++ TY + I R G A +MV RG +T
Sbjct: 511 CEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSST 563
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 102/250 (40%), Gaps = 3/250 (1%)
Query: 232 AFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKK 291
F L L + +L K+ I R V + N V + LV G+ + ++EM
Sbjct: 255 GFCNLGQLNEATSLFKQMIGRNV-MPNTVTFTILVDGLCKEGMILEARRVFEMMTE--NG 311
Query: 292 TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADAC 351
E Y+ L+ C + + L M G P YN ++ CK+ + +A
Sbjct: 312 VEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAK 371
Query: 352 ELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
LL EM R+ PD +TY + C+ G+ VA F +M GL P T++ + G
Sbjct: 372 TLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGL 431
Query: 412 FIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
++A++ + + +Y++L A+ + S + G++P+V
Sbjct: 432 CKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSV 491
Query: 472 SVYRRVLKHL 481
Y ++ L
Sbjct: 492 VTYTVMISGL 501
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 80/195 (41%), Gaps = 35/195 (17%)
Query: 319 LVEMRQVGCEPI-----------------------------------TLTYNYVLGVLCK 343
L +M ++G +P +TY ++ LCK
Sbjct: 129 LGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCK 188
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
G +A +LL++M + C PD + Y I C+ + + A FF++MV +G+ P + T
Sbjct: 189 IGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVT 248
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
+++ + G+ + +A + + + +++L K + A+ V M
Sbjct: 249 YSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMT 308
Query: 464 KNGLRPNVSVYRRVL 478
+NG+ P+ Y ++
Sbjct: 309 ENGVEPDAYTYSALM 323
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 50/114 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+IL+ +C+ LL M++ EP YN ++ +C G+ A EL +
Sbjct: 424 YSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLF 483
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+ P +TY + I + G + A F +MV G P T+ I+G+
Sbjct: 484 VKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFL 537
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 62/155 (40%), Gaps = 2/155 (1%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P + +N +LG L K + L ++M N P+ T I I C + V F F
Sbjct: 67 PPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAF 126
Query: 389 --FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
+M K GLQP T + G + DA K + S + Y+ +
Sbjct: 127 SALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGL 186
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K + A +L +M + G +P+V Y V+ L
Sbjct: 187 CKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSL 221
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 109/217 (50%), Gaps = 3/217 (1%)
Query: 283 EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLC 342
EM ++ +K V ++IL+ +C+ + +M Q+ EP +TY+ ++ +C
Sbjct: 304 EMLEWNMKP---DVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVC 360
Query: 343 KNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLA 402
K+ ++ LL EML RN PD +T+ I++ C+ G A + N M++RGL+P +
Sbjct: 361 KSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVV 420
Query: 403 THAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM 462
T+ + + GY + + ++A K + +K + + Y++L + K+ AK + EM
Sbjct: 421 TYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEM 480
Query: 463 MKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSS 499
GL PN + ++ L + + + AK L + S
Sbjct: 481 SHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGS 517
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 101/220 (45%), Gaps = 30/220 (13%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
M K V E +V Y+I+I +C+ DL MR +G P +TYN ++ +C
Sbjct: 232 MKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCN 291
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
+GQ A L +EML N PD +T+ I + C+ G A + F +M++ ++P + T
Sbjct: 292 SGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVT 351
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML--------------YSLLASLHDKN 449
+++ I G V + +K SS +L +S+ + K
Sbjct: 352 YSSLIHG--------------VCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKK 397
Query: 450 NNPVMAKNVLSEMMKNGLRPNVSVYRRVLKH--LHTSHQE 487
A+++++ M++ GLRPNV Y ++ LH+ E
Sbjct: 398 GMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDE 437
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 9/216 (4%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPI 330
++E SV G K + E + Y+ LI +C+ +K LL EM P
Sbjct: 329 VVLEALSVFG-----KMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPD 383
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN 390
+T++ + V CK G ++A ++ M+ R P+ +TY + C + D A F+
Sbjct: 384 VVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFD 443
Query: 391 QMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNN 450
MV +G P + ++ IKGY R ++A + + K + +++ ++ L S +
Sbjct: 444 IMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAG 503
Query: 451 NPVMAKNVLSEMMKNGLRPNVSVYRRVL----KHLH 482
P AK + +M +G P++ Y +L KH H
Sbjct: 504 RPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGH 539
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 68/159 (42%), Gaps = 8/159 (5%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
G CL S + ++F ++ V K V YNILIK C+ + L E
Sbjct: 428 GYCLHSQMDEARKVFDIM--------VNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDE 479
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M G P ++T+ ++ LC+ G+ A EL ++M C PD ITY + C+ G
Sbjct: 480 MSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGH 539
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
D A F + K L+P + G + EDA
Sbjct: 540 LDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDA 578
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 94/223 (42%), Gaps = 5/223 (2%)
Query: 261 GGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGP 315
G SC V + LI L L + V+ K + + +N LI +C
Sbjct: 134 GVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEA 193
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
+ L + G +P T+ ++ LCK G+ + A +++M+ +C P+ ++Y I I
Sbjct: 194 MEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDS 253
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
C+ + A + F M G+ P + T+ + I G +++ A +
Sbjct: 254 LCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPD 313
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ +S+L K + A +V +M++ + P++ Y ++
Sbjct: 314 VVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLI 356
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ LI +C+ ++L +M GC P +TY+ +L CK+G +A L E +
Sbjct: 492 HTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALK 551
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
P+ + +I + C+ GK + A F+ + LQP
Sbjct: 552 KSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQP 592
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 125/298 (41%), Gaps = 23/298 (7%)
Query: 195 SDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIW--R 252
S + LV+ +C R++ + + L+ N+ K++GF+P ++S A+ I +
Sbjct: 132 SAVFDLVVKSCARVN---LINKALSIVNL------AKSYGFMPGVLSYNAILDAVIRTKQ 182
Query: 253 VVEVLNQVGGSCLVSGV-------RALIEMFSVLGLYEMAKYVIKKTERK-----VSYYN 300
V++ + + SGV LI F G EM + ER V YN
Sbjct: 183 SVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYN 242
Query: 301 ILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGR 360
+I C+ LL M G P ++YN V+ LC+ GQ + E+LEEM R
Sbjct: 243 TIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKR 302
Query: 361 NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
PD +T+ I C VG F A +MVK GL P + T+ I A
Sbjct: 303 RYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRA 362
Query: 421 YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+++ D+ + Y+ L + A ++ EM++NG P + Y ++
Sbjct: 363 MEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALI 420
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 83/183 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N LI C +F L EM + G P +TY ++ +CK G A E L++M
Sbjct: 311 FNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMR 370
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R HP+ TY I + G A+ +MV+ G P + T+ A I G+ I R E
Sbjct: 371 DRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRME 430
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA + ++ + YS + S +N A + EM+ G+ P+V+ Y ++
Sbjct: 431 DASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLI 490
Query: 479 KHL 481
+ L
Sbjct: 491 QGL 493
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 116/256 (45%), Gaps = 21/256 (8%)
Query: 248 KGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKK-TER----KVSYYNIL 302
K +++++ + + G + + ALI +LG E A ++++ ER V Y+ +
Sbjct: 395 KQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTI 454
Query: 303 IKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNC 362
I CR + + L VEM G P TY+ ++ LCK + + C+L +EML
Sbjct: 455 ISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGL 514
Query: 363 HPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
PD +TY I C G D A ++M+++G P + T+ I G+ R ++A +
Sbjct: 515 PPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKR 574
Query: 423 YVVLSADKYKSSSNMLYSLLA----SLHDKNNNPVM-----------AKNVLSEMMKNGL 467
++ + + + Y+ L +L K+ +M A VL M++ G
Sbjct: 575 LLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGY 634
Query: 468 RPNVSVYRRVLKHLHT 483
+ N VY V+ H H+
Sbjct: 635 KLNEEVY-NVIIHGHS 649
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 110/247 (44%), Gaps = 17/247 (6%)
Query: 269 VRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCE 328
+R + E F +L L MA +K + YN++I +CR K ++L EM +
Sbjct: 251 LRKIGEAFKLLRL--MA---LKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYV 305
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P +T+N ++ C G A L EM+ P+ +TY I C+ G + A F
Sbjct: 306 PDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEF 365
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
+QM RGL P T+ I G+ + AY+ + + + + + Y+ L + H
Sbjct: 366 LDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCI 425
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYRRVL------KHLHTSHQ---EHMAKCLS---SR 496
A +L EM++ G P+V Y ++ + L + Q E +AK +S +
Sbjct: 426 LGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVAT 485
Query: 497 YSSLSLG 503
YSSL G
Sbjct: 486 YSSLIQG 492
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 86/217 (39%), Gaps = 37/217 (17%)
Query: 302 LIKEMCRRCDFKGPRDLLVEM-RQVGCEPITLTYNYVLGVLCKNGQDADACE-LLEEMLG 359
L+ + C R + +V + + G P L+YN +L + + Q E + +EM+
Sbjct: 137 LVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVE 196
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
P+ TY I I C G ++ FF +M + G P + T+ I Y + +
Sbjct: 197 SGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGE 256
Query: 420 AYKYVVLSADK---------------------YKSSSNML--------------YSLLAS 444
A+K + L A K K +S +L ++ L +
Sbjct: 257 AFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLIN 316
Query: 445 LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ N A + +EM+KNGL PNV Y ++ +
Sbjct: 317 GYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSM 353
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 75/186 (40%), Gaps = 15/186 (8%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG---------------VLCK 343
YN+LI ++ K + LL+++ P +TYN ++ C
Sbjct: 556 YNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCM 615
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
G +A +LE ML + + Y + I +VG + A+N + +M+ G P T
Sbjct: 616 KGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVT 675
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
A K + + + + + + + + L +L ++ K N NVL +M
Sbjct: 676 IMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGNMDAVFNVLKDMA 735
Query: 464 KNGLRP 469
+GL P
Sbjct: 736 LSGLLP 741
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 109/233 (46%), Gaps = 2/233 (0%)
Query: 269 VRALIEMFSVLGLYEMAKYVIKKTERKVSY-YNILIKEMCRRCDFKGPRDLLVEMRQVGC 327
+R L ++ + ++ K +IK R ++ YN L++ ++ D G +LL EMR G
Sbjct: 390 IRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGI 449
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
P +Y ++ LC+NG+ +A LLEEM+ P+A Y I+ + G +A
Sbjct: 450 LPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACE 509
Query: 388 FFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHD 447
+M K + P L + + IKG R E+A +Y + YS L +
Sbjct: 510 ALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYC 569
Query: 448 KNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK-HLHTSHQEHMAKCLSSRYSS 499
K N A +L +M+ +GL+PN Y +L+ + ++ E ++ L S S
Sbjct: 570 KTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGS 622
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 87/176 (49%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ +C+ K + LL EM G +P + Y ++ K G+ A+A ++L+EM+
Sbjct: 316 YGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMI 375
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ I Y+ I C++G+ A +M+K GL+P T+ ++G+F + +
Sbjct: 376 SAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKD 435
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
A++ + + + Y ++ + +N A N+L EM+ GL+PN +Y
Sbjct: 436 GAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMY 491
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 85/195 (43%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ I+ C+ DF + + EMR+ C +TYN ++ LC++G +A E
Sbjct: 243 VYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKE 302
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM+ PDA TY + C+ + A ++M GL+P + + + G+
Sbjct: 303 EMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEG 362
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ +A+ + + ++Y L K A +L EM+K GLRP+ Y
Sbjct: 363 KTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYN 422
Query: 476 RVLKHLHTSHQEHMA 490
+++ H + A
Sbjct: 423 PLMQGHFQQHDKDGA 437
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 97/219 (44%), Gaps = 37/219 (16%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y I+I +C+ + K +LL EM G +P Y ++ K G + ACE LE+M
Sbjct: 456 YGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMT 515
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
N HPD Y I VG+ + A ++ Q+ KRGL P T++ I GY E
Sbjct: 516 KANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLE 575
Query: 419 ------------------DAYKYVV---LSADKYKSSSNMLYSLLASLHDKNNNPV---- 453
D Y ++ ++ Y+ S++L S+L S DK +N +
Sbjct: 576 KADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGS-GDKPDNHIYGIV 634
Query: 454 -----------MAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+A VL+E+ KNGL P++ +Y ++ L
Sbjct: 635 IRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGL 673
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 84/183 (45%), Gaps = 2/183 (1%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE-LLEEML 358
N L+K++ R + L M G P TY+ + CK +D DA + + EEM
Sbjct: 212 NGLLKDLLRADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCK-ARDFDAAKKVFEEMR 270
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R+C + +TY + I CR G + AF F +MV GL P T+ A + G R +
Sbjct: 271 RRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLK 330
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + + + ++Y L K A ++L EM+ G++PN +Y ++
Sbjct: 331 EAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLI 390
Query: 479 KHL 481
+ L
Sbjct: 391 RGL 393
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 61/135 (45%), Gaps = 4/135 (2%)
Query: 263 SCLVSGVRALIEMFSVLGLY-EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
S L+SG+ + +M +GL EMAK + E + YN LI CR D R++
Sbjct: 667 SSLISGLCKIADMEKAVGLLDEMAK---EGLEPGIVCYNALIDGFCRSGDISRARNVFDS 723
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
+ G P +TY ++ CKNG DA +L +EML R PDA Y +
Sbjct: 724 ILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAAD 783
Query: 382 FDVAFNFFNQMVKRG 396
+ A +M RG
Sbjct: 784 LEQALFLTEEMFNRG 798
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 63/122 (51%), Gaps = 5/122 (4%)
Query: 283 EMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYV 337
E+A V+ + E+ + Y+ LI +C+ D + LL EM + G EP + YN +
Sbjct: 645 EVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNAL 704
Query: 338 LGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
+ C++G + A + + +L + P+ +TY I +C+ G AF+ + +M+ RG+
Sbjct: 705 IDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGI 764
Query: 398 QP 399
P
Sbjct: 765 AP 766
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 1/180 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y I+I+ + R + + +L E+ + G P Y+ ++ LCK A LL+EM
Sbjct: 631 YGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMA 690
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P + Y I CR G A N F+ ++ +GL P T+ A I G
Sbjct: 691 KEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDIT 750
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA+ D+ + +Y++LA+ + A + EM G NVS++ ++
Sbjct: 751 DAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGY-ANVSLFNTLV 809
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 88/213 (41%), Gaps = 5/213 (2%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERKVSY-----YNILIKEMCRRCDFKGPRDLLVEMRQV 325
+LI+ S +G E A+ + +++ Y+ LI C+ + + LL +M
Sbjct: 528 SLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNS 587
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G +P TY +L K+ +L+ MLG PD Y I I R +VA
Sbjct: 588 GLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVA 647
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
F ++ K GL P L +++ I G E A + A + + Y+ L
Sbjct: 648 FMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDG 707
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
++ + A+NV ++ GL PN Y ++
Sbjct: 708 FCRSGDISRARNVFDSILAKGLVPNCVTYTALI 740
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 95/199 (47%), Gaps = 4/199 (2%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG-CEPITLTYNYVLG 339
L EM ++ + + V +N++IK +C +L EM + G C P TY+ ++
Sbjct: 900 LKEMPRHGVPQN---VILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVD 956
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
L K+G+ DAC L+E+M+ + C P+ +TY + C+ GK D A +M + G P
Sbjct: 957 SLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSP 1016
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
+ T+ I G+ R ++AY + D + + Y++L K A ++
Sbjct: 1017 NIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLV 1076
Query: 460 SEMMKNGLRPNVSVYRRVL 478
M++ G PN+ Y +L
Sbjct: 1077 EVMVEKGYVPNLFTYNSLL 1095
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 84/171 (49%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L+ +M GC P +TY+ +L LCK G+ +A LL+ M C P+ +TY I C
Sbjct: 970 LVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHC 1029
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
++G+ D A++ +MV G QP + T+ + + + EDA V + +K +
Sbjct: 1030 KLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLF 1089
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEH 488
Y+ L + K + A +LS M++ G PNV Y V+ L + + H
Sbjct: 1090 TYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVH 1140
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 96/213 (45%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
M K + + + V Y L+ CR D G +L+ +M + G P +TYN ++ V C+
Sbjct: 323 MDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCR 382
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
A ++L+ M+ C PDAI Y I C+ GK A + QM++RG +P +A
Sbjct: 383 RNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVAC 442
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
+ I + A + + +S + + YS+L K A++ L M+
Sbjct: 443 LSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMV 502
Query: 464 KNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSR 496
KN P+V Y V+ L S + + A L R
Sbjct: 503 KNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDR 535
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 1/184 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ C++ + + LL M Q GC P ++YN V+ LCK + + LLE+ML
Sbjct: 1091 YNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQML 1150
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
NC PD +T+ I C+ + D+A+ FN + + G P L T+ + + G R++
Sbjct: 1151 SNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFD 1210
Query: 419 DAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
A + K S +++ Y+ + K+ A + +M+ +GL P+ Y V
Sbjct: 1211 QAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIV 1270
Query: 478 LKHL 481
+ L
Sbjct: 1271 ISSL 1274
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 81/182 (44%), Gaps = 1/182 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEM-RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
YN L+ +C+ F LL EM R+ GC P +TYN V+ LCK+ + A +L +M
Sbjct: 1196 YNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQM 1255
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
L PD +TY I I C+ D A N M+K G P T+ I G+
Sbjct: 1256 LSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNL 1315
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ A + + L K + +S+ K A +L M++ GL P+ Y +
Sbjct: 1316 DKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTL 1375
Query: 478 LK 479
LK
Sbjct: 1376 LK 1377
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+I+I C+ + +L M++ C P +TY+ ++ LCK G A ++ +
Sbjct: 545 VVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQ 604
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EMLG C P+ +TY I C++ K + A M K+ P T+ I G
Sbjct: 605 EMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNAS 664
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM 462
R E+A++ + DK M Y L K NN + + +L EM
Sbjct: 665 RLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEM 711
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 84/180 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I + + LL EM G P +YN VL CK + +A LLE+M+
Sbjct: 233 YNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMV 292
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R C PD ++Y I C++ + D A ++M++RG QP + T+ + G+ +
Sbjct: 293 TRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLD 352
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + V ++ + + Y+ + + + N+ A VL M++ G P+ Y ++
Sbjct: 353 GAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTII 412
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 83/190 (43%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN ++ +C+ L MR G P +TY+ V+ CK+ A ++LE
Sbjct: 510 VVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLE 569
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M C PD +TY I C+ G D AF+ F +M+ G P L T+ I G
Sbjct: 570 RMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKIN 629
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ E A + + + + + ++ Y+ L + + A VL EM G P+ Y
Sbjct: 630 KVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYG 689
Query: 476 RVLKHLHTSH 485
+L+ L ++
Sbjct: 690 TLLRALQKTN 699
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 1/173 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+I+I +C+ ++L M + G +P +TY ++ CK G A E+L+ +L
Sbjct: 1267 YSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLL 1326
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ +PD +T+ IFI + + G+ A M++ GL P T+ +KG+ E
Sbjct: 1327 SKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTE 1386
Query: 419 DAYKYVVLSADKYKSSSNMLY-SLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
DA + N Y +L+ L DK + + V M+ G + N
Sbjct: 1387 DAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLN 1439
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 92/201 (45%), Gaps = 1/201 (0%)
Query: 282 YEMAKYVIKKTER-KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
+++ + +I++ R V+ + LI +C+ ++LL + C P + Y+ ++
Sbjct: 425 HDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHA 484
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
LCK + +A L+ M+ C+PD +TY + C+ + + AF F++M G+ P
Sbjct: 485 LCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPD 544
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
+ T++ I + + A+K + + + YS L + K A +V
Sbjct: 545 VVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQ 604
Query: 461 EMMKNGLRPNVSVYRRVLKHL 481
EM+ G PN+ Y ++ L
Sbjct: 605 EMLGCGCAPNLVTYNTLIDGL 625
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 79/187 (42%), Gaps = 1/187 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y +L+ C+ + L+ M + G P TYN +L + CK + AC+LL
Sbjct: 1053 VVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLS 1112
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+ + C P+ ++Y I C+ K QM+ P + T I Y
Sbjct: 1113 SMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTY 1172
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM-KNGLRPNVSVY 474
R + AY+ L + + + + Y+ L K+ A+ +L EM K G P++ Y
Sbjct: 1173 RVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITY 1232
Query: 475 RRVLKHL 481
V+ L
Sbjct: 1233 NTVIDGL 1239
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 78/181 (43%), Gaps = 5/181 (2%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMR-QVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
N L++ + R K P+D L R ++ C P T+ ++ LC+ G A ELL+EM
Sbjct: 848 NCLLQALLR---LKRPKDALQVYRNKLCCSPNMFTFTILIHGLCRAGDIGTAYELLKEMP 904
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG-LQPRLATHAAFIKGYFIFYRY 417
+ I + + I C K D A F +M + G P + T++ + +
Sbjct: 905 RHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKV 964
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+DA + V K S + + YS L K A +L M ++G PN+ Y +
Sbjct: 965 DDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTI 1024
Query: 478 L 478
+
Sbjct: 1025 I 1025
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 1/176 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ LI R +L EM + G + + +L LC GQ +DA EM
Sbjct: 164 YSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM- 222
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C PD++TY I + + D A +MV G P + ++ + G+ R E
Sbjct: 223 SKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVE 282
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+A + + + Y+ + + K + A V+ +M++ G +PNV Y
Sbjct: 283 NALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITY 338
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 1/144 (0%)
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N +L VL K Q + A +L + D +TY I R GK A+ F++M +
Sbjct: 130 NCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNR 189
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM 454
+GL+ H + ++G + DA + K ++ Y+ + + K++
Sbjct: 190 KGLKAHAGVHKSILRGLCDAGQCSDAVLH-FREMSKTCPPDSVTYNTMINGLSKSDRLDD 248
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVL 478
A +L EM+ NG PNV Y VL
Sbjct: 249 AIRLLEEMVDNGFAPNVFSYNTVL 272
>gi|242073234|ref|XP_002446553.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
gi|241937736|gb|EES10881.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
Length = 381
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 6/215 (2%)
Query: 269 VRALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMR 323
V ++ S GL + ++K + V YN +I MC + +LL M+
Sbjct: 89 VNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVVTYNAVISGMCEQGHVDSALELLSNMQ 148
Query: 324 QVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
GC+P +TYN +L LC Q DA EL+ +M +C PD +T+ I + C+ G
Sbjct: 149 SFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQNDCLPDNVTFNTIISFLCQKGLIL 208
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
AF F QM ++G P T++ I G + E A + + A K ++ M Y LL
Sbjct: 209 QAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQALELLNEMASKGYNTDKM-YQLLT 267
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+K + V+ ++ +G+ P ++ VL
Sbjct: 268 ESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVL 302
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 94/233 (40%), Gaps = 35/233 (15%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V YN++I MCR D R+LL + GC+P T+ YN VL LC + DA E
Sbjct: 13 EPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGLCSIERWVDAEE 72
Query: 353 LLEEMLGRNCHP-----------------------------------DAITYEIFIVYSC 377
LL+EM+ NC P + +TY I C
Sbjct: 73 LLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVVTYNAVISGMC 132
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
G D A + M G +P + T+ +KG ++EDA + ++ + N+
Sbjct: 133 EQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQNDCLPDNV 192
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
++ + S + + A V +M + G PN + Y ++ L + + A
Sbjct: 193 TFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQA 245
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 85/183 (46%), Gaps = 2/183 (1%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
+L+ MR GCEP +TYN ++ +C+ G A ELL + R C P+ + Y +
Sbjct: 2 ELIDLMRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGL 61
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
C + ++ A ++MV+ P AT + + +Y+ K+ ++N
Sbjct: 62 CSIERWVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLE-KMSKHGCTAN 120
Query: 437 ML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSS 495
++ Y+ + S + + A +LS M G +P++ Y +LK L ++ Q A+ L
Sbjct: 121 VVTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMI 180
Query: 496 RYS 498
+ S
Sbjct: 181 KMS 183
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 55/146 (37%), Gaps = 34/146 (23%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N +I +C++ ++ +M + GC P + TY+ ++G L K G+ A ELL EM
Sbjct: 194 FNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQALELLNEMA 253
Query: 359 GRN----------------------------------CHPDAITYEIFIVYSCRVGKFDV 384
+ P + + ++ CR GK D
Sbjct: 254 SKGYNTDKMYQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVLLVLCRNGKTDY 313
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKG 410
A + MV G P T+ I+G
Sbjct: 314 AIDVLADMVSYGCMPDELTYIILIEG 339
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
M ++K V +N LI C+R L+ M G P +TYN VL LCK
Sbjct: 443 MNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCK 502
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
G+ + E EEM+ + C P+AITY I I C++ + + A +M + GL P +
Sbjct: 503 AGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVS 562
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
I G+ + AY +K S++ +++L + N MA+ + EM+
Sbjct: 563 FNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMI 622
Query: 464 KNGLRPNVSVYRRVLKHL 481
G +P++ YR ++ L
Sbjct: 623 SKGYKPDLYTYRILVDGL 640
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 56/115 (48%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN L++ +C+ + L M GC P TYN ++ CK+G +A ELL+
Sbjct: 280 VVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLK 339
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ + + PD +TY I C G + A FN+ + L+P L + + +KG
Sbjct: 340 DAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKG 394
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 72/176 (40%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI +C D + +L E + +P + YN ++ LC+ G A +++ EM+
Sbjct: 353 YCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMV 412
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
CHPD TY I I C++G A N + +G P + T I GY + +
Sbjct: 413 EEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLD 472
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
A + V + + Y+ + + K EM+ G RPN Y
Sbjct: 473 SALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITY 528
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 76/182 (41%), Gaps = 1/182 (0%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
NI I+ +C + LVE P +TYN ++ LCK+ + +A + L M+
Sbjct: 250 NIWIRGLCEDGRLEEAV-ALVERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMN 308
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
+ C PD TY I C+ G A V +G P T+ + I G E
Sbjct: 309 QGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIER 368
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
A + + K ++Y+ L + + A V++EM++ G P++ Y ++
Sbjct: 369 ALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIIN 428
Query: 480 HL 481
L
Sbjct: 429 GL 430
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 2/174 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNILI+ C+ + ++V M Q G P +++N ++ C+NG A L +++
Sbjct: 528 YNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLD 587
Query: 359 GRNCHPDAITYEIFI-VYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
+ A T+ I I YS ++ +A F +M+ +G +P L T+ + G
Sbjct: 588 EKGYSATADTFNILIGAYSSKL-NMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANV 646
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
+ AY ++ K S + + +L N+ A ++ M++ G+ P V
Sbjct: 647 DRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPEV 700
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 82/186 (44%), Gaps = 1/186 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V+ +N ++ +C++ D LL ++ + G T N + LC++G+ +A L+E
Sbjct: 211 VATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVE 270
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M G PD +TY + C+ K A + +M+ +G P T+ I GY
Sbjct: 271 RM-GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSG 329
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
++A + + + K + Y L + + A + +E L+P++ VY
Sbjct: 330 MLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYN 389
Query: 476 RVLKHL 481
++K L
Sbjct: 390 SLVKGL 395
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 1/161 (0%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
LL + + GC+ Y V+ L +G +A L +EMLGR+ PD T+ + C
Sbjct: 163 LLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALC 222
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ G + +++KRG+ T +I+G R E+A +V Y + +
Sbjct: 223 QKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVA-LVERMGAYVAPDVV 281
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
Y+ L K++ A L MM G P+ Y ++
Sbjct: 282 TYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTII 322
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 41/110 (37%)
Query: 303 IKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNC 362
I+ R + D M C P YN ++ L A ++ ML
Sbjct: 78 IQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGV 137
Query: 363 HPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
PDA T+ + + C G+ VA + +RG + A + ++G +
Sbjct: 138 APDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLY 187
Score = 39.3 bits (90), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 67/159 (42%), Gaps = 1/159 (0%)
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
R L EM P T+N VL LC+ G ++ LL ++L R + T I+I
Sbjct: 196 RHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRG 255
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
C G+ + A +M + P + T+ ++G + ++A +Y+ ++
Sbjct: 256 LCEDGRLEEAVALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPD 314
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ Y+ + + K+ A +L + + G P+ Y
Sbjct: 315 DFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTY 353
>gi|302142966|emb|CBI20261.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 154/355 (43%), Gaps = 17/355 (4%)
Query: 129 TPKQVSEIIELLR-SGDSETESKLLSMSVSLSNASVIEILRVLNSEKVSALCFLKYMRE- 186
T +V +++ R S SE E L +SL++ V+++L+ S+ A F +
Sbjct: 86 TALEVQNLLKTYRDSSVSEIEGALHQCRLSLTDDLVLDVLKRHRSDWRPAYVFFNWASRC 145
Query: 187 -IMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKAL 245
I + + + ++D GR+ + M QL ++ + + +NE+ FG VL++ A
Sbjct: 146 GIESGYSPGCGVHNEILDILGRMRRFHEMTQLFDEMSKRKGLVNERTFG---VLLNRYAA 202
Query: 246 TKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAK-----YVIKKTERKVSYYN 300
K V++ + G+ + S + ++ + VLG AK + K + Y
Sbjct: 203 AHKTEEAAVKIFYKRKGAWIRS-MNVILNGWCVLGSLREAKRFWNDIITSKCKPDKFTYG 261
Query: 301 ILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGR 360
I I + + L M + GC P N ++ LC + +A E+L EM R
Sbjct: 262 IFINSLTKAGKLSTAVKLFQAMWEKGCNPDVAICNCIIDALCFKKRIPEALEVLREMNER 321
Query: 361 NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
+C PD TY I + C++ +F+ + + M ++G P T+ +K + +
Sbjct: 322 DCQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQKGCLPNARTYGYLLKS----TKKPEE 377
Query: 421 YKYVVLSADKYKSSSNM-LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
++ ++ N Y+L+ L+ + ++ L EM +NG+ P+ Y
Sbjct: 378 VPGILERMERNGCRMNSDCYNLILKLYMDWGYELKLRSTLDEMERNGMGPDQRTY 432
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 56/140 (40%), Gaps = 32/140 (22%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL----------GVL---- 341
V+ YN LIK +C+ F+ +LL +M Q GC P TY Y+L G+L
Sbjct: 327 VATYNSLIKHLCKIQRFEKVYELLDDMEQKGCLPNARTYGYLLKSTKKPEEVPGILERME 386
Query: 342 ---------CKN---------GQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
C N G + L+EM PD TY I I G+ D
Sbjct: 387 RNGCRMNSDCYNLILKLYMDWGYELKLRSTLDEMERNGMGPDQRTYTIMIHGLYDKGRMD 446
Query: 384 VAFNFFNQMVKRGLQPRLAT 403
A ++F QM G+ P T
Sbjct: 447 DALSYFKQMTLMGMVPEPRT 466
>gi|413951888|gb|AFW84537.1| hypothetical protein ZEAMMB73_783984 [Zea mays]
Length = 238
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 87/183 (47%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI CR C + +EM GC P +TYN ++ LCK + +A L +EML
Sbjct: 13 YNALINGFCRACKISDAVKIYIEMTGNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEML 72
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R PD TY I CRV K D A +N+++ G+Q + H I G +
Sbjct: 73 ERGFKPDIRTYGSLIRGLCRVKKIDAALCIWNEILDAGIQVDVIVHNILIHGLCSAGKVN 132
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA+ + +K S + + Y+ L + + A ++ + ++ NGL+P++ Y +
Sbjct: 133 DAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDTAASLWAAILDNGLKPDIVTYNTRI 192
Query: 479 KHL 481
K L
Sbjct: 193 KGL 195
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M + GC+P + YN ++ C+ + +DA ++ EM G C P ITY I C+ K
Sbjct: 1 MMKDGCKPNSHVYNALINGFCRACKISDAVKIYIEMTGNGCCPTIITYNTLIDGLCKAEK 60
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ A + +M++RG +P + T+ + I+G
Sbjct: 61 YQEASSLTKEMLERGFKPDIRTYGSLIRG 89
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 48/114 (42%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +NILI +C + +EM++ C P +TYN ++ + G A L
Sbjct: 115 VIVHNILIHGLCSAGKVNDAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDTAASLWA 174
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
+L PD +TY I C + N+++ G+ P + T + ++
Sbjct: 175 AILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPSVITWSILVR 228
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 83/175 (47%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +I+ +C R LL +M Q GC+P +TY +L +CK+ +A +L+EM
Sbjct: 144 YTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMR 203
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C P+ +TY + I CR G+ D A N++ G QP + ++ +KG R++
Sbjct: 204 AKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWD 263
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
D DK + + + +L + A VL +M ++G PN ++
Sbjct: 264 DVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTL 318
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 138/321 (42%), Gaps = 57/321 (17%)
Query: 206 GRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISS----KALTKKGIWRVVEVL--NQ 259
GR+DD +++LN + Y GF P ++S K L W V+VL
Sbjct: 225 GRVDD---AKEILNRLSSY---------GFQPDIVSYTTVLKGLCAARRWDDVKVLFAEM 272
Query: 260 VGGSCLVSGVR--ALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDF 312
V C+ + V L+ F G+ E A V+++ + + NI+I +C++
Sbjct: 273 VDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRV 332
Query: 313 KGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIF 372
D L M GC P T++Y VL LC+ G+ A ELL EM+ +NC P+ +T+ F
Sbjct: 333 DDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTF 392
Query: 373 IVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK---------- 422
I C+ G + A M + G + T+ A + G+ + R + A +
Sbjct: 393 ICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPN 452
Query: 423 ---YVVL-----SADKYKSSSNML--------------YSLLASLHDKNNNPVMAKNVLS 460
Y L A++ +++ +L +++L S + A +++
Sbjct: 453 TITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVN 512
Query: 461 EMMKNGLRPNVSVYRRVLKHL 481
+MM++G PN+ + +L +
Sbjct: 513 QMMEHGCTPNLITFNTLLDGI 533
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 130/298 (43%), Gaps = 25/298 (8%)
Query: 194 NSDICSLVIDNC---GRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGI 250
N+ +C++VI+ GR+DD LN+ +Y N + VL + L + G
Sbjct: 315 NTTLCNIVINAICKQGRVDD---AYDFLNNMGMYGC--NPDTISYTTVL---RGLCRAGR 366
Query: 251 WRVVEVL--NQVGGSCLVSGV--RALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNI 301
W + L V +C + V I + GL E A +I+ + YN
Sbjct: 367 WEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNA 426
Query: 302 LIKEMCRRCDFKGPRDLLVEM-RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGR 360
L+ C +G D +E+ + CEP T+TY +L LC + A ELL M+ +
Sbjct: 427 LVHGFC----VQGRVDSALELFNNLPCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQK 482
Query: 361 NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
+C +A+T+ + + + C+ G + A NQM++ G P L T + G E+A
Sbjct: 483 DCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEA 542
Query: 421 YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ + K S + YS + + + + A +L + G+RP V +Y ++L
Sbjct: 543 LELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKIL 600
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 74/195 (37%), Gaps = 38/195 (19%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ CR R L+ M P TY ++ LC G+ DA LL++ML
Sbjct: 112 YNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALALLDDML 168
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R C P +TY + + C+ F A N ++M +G P + T+ I G R +
Sbjct: 169 QRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 228
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
D AK +L+ + G +P++ Y VL
Sbjct: 229 D-----------------------------------AKEILNRLSSYGFQPDIVSYTTVL 253
Query: 479 KHLHTSHQEHMAKCL 493
K L + + K L
Sbjct: 254 KGLCAARRWDDVKVL 268
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 63/159 (39%), Gaps = 3/159 (1%)
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
LC+ G+ +DA +L D Y + CR G+ D A M + P
Sbjct: 84 LCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARRLIASM---PVPPD 140
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
T+ I+G R DA + + S + Y++L K++ A NVL
Sbjct: 141 AYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLD 200
Query: 461 EMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSS 499
EM G PN+ Y ++ + + AK + +R SS
Sbjct: 201 EMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSS 239
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 52/112 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N L+ + + C+ + +LL + G T+TY+ V+ VL + + +A ++L +
Sbjct: 526 FNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQ 585
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
P Y + C+ + D A +FF MV G P +T+ I+G
Sbjct: 586 DMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEG 637
>gi|147797621|emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
Length = 912
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 105/219 (47%), Gaps = 3/219 (1%)
Query: 266 VSGVRALIEMFSVLGLYEMAKYVIKKTERK--VSYYNILIKEMCRRCDFKGPRDLLVEMR 323
VS +I + +G+ E AK V + K + YN +I C++ + ++ +M
Sbjct: 253 VSTYTTIIRGYCKMGMIENAKNVFDEMGCKPNLVTYNTMINGFCKKGLMESAMKIVDQMT 312
Query: 324 QV-GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
+ C P T+TY ++ CK G+ +A + +EEM+ RNC P+ +TY I C G
Sbjct: 313 ETEDCMPDTVTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLNGNV 372
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
D A +M GL+ +ATH + +KG + + +DA +++ + Y ++
Sbjct: 373 DEAKRMMTRMRLNGLKDNVATHTSILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVV 432
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + K A ++L EM G+ P+VS + V + L
Sbjct: 433 VNEYCKIGKADDAISLLKEMKSRGINPSVSSFNAVFRIL 471
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 95/246 (38%), Gaps = 35/246 (14%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERKVSYYNI-LIKEMCRRCDFKGPRDLLVEMRQVGCEP 329
A+ ++ GL+ A +++ R + +K R D +G +++
Sbjct: 156 AITDLLISHGLFSTASSLLQSHHRLSDFAAAKFVKAYGDRGDIRGAIHWFHRAKKMESGR 215
Query: 330 ITLTYNYVLGVLCKNGQDADACELLEEMLGRNC-HPDAITYEIFIVYSCRVGKFDVAFNF 388
+YN +LGV K + A + ++++ PD TY I C++G + A N
Sbjct: 216 CLFSYNAILGVFVKANRIMLARAVFDQIVKEGVVKPDVSTYTTIIRGYCKMGMIENAKNV 275
Query: 389 FNQM----------------VKRGL-----------------QPRLATHAAFIKGYFIFY 415
F++M K+GL P T+ I GY
Sbjct: 276 FDEMGCKPNLVTYNTMINGFCKKGLMESAMKIVDQMTETEDCMPDTVTYTTLIDGYCKRG 335
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E+A KY+ + + + Y+ + N N AK +++ M NGL+ NV+ +
Sbjct: 336 ELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATHT 395
Query: 476 RVLKHL 481
+LK L
Sbjct: 396 SILKGL 401
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 77/199 (38%), Gaps = 1/199 (0%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
M + + + V+ + ++K +C L EM +G E Y V+ CK
Sbjct: 379 MTRMRLNGLKDNVATHTSILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCK 438
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
G+ DA LL+EM R +P ++ GK D A QM + G P +
Sbjct: 439 IGKADDAISLLKEMKSRGINPSVSSFNAVFRILVESGKTDKAGLILRQMKQLGCTPNFLS 498
Query: 404 HAAFIKGYF-IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM 462
++ I G R + ++V +YS L + ++ N MA + EM
Sbjct: 499 YSTVIDGLCKAKGRMHEVEEFVDDMCRNGHHLDASMYSWLVKGYCEDGNADMAMRLFCEM 558
Query: 463 MKNGLRPNVSVYRRVLKHL 481
+ G N+ + +K L
Sbjct: 559 LDMGYVINLESFLAFVKGL 577
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 5/216 (2%)
Query: 271 ALIEMFSVLGLYEMAKYVIKK-----TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
AL+ S +G ++++ K +R V YNI+I +C+ D + R L +M++
Sbjct: 225 ALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEA 284
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P +TYN ++ K G + + E+M +C PD ITY I C+ + A
Sbjct: 285 GFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKA 344
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
F F ++M GL+P + T++ FI + ++A K+ V + + Y+ L
Sbjct: 345 FEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDA 404
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ K N A ++ E+++ G++ NV Y +L L
Sbjct: 405 NCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGL 440
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 104/241 (43%), Gaps = 12/241 (4%)
Query: 258 NQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDF 312
NQ + LV G EM E AK ++K+ + K + Y ++ +C
Sbjct: 464 NQETYTALVHGFIKAKEM-------EYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRL 516
Query: 313 KGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIF 372
+ + L+ E+++ G + Y ++ K+GQ +A LLEEML +TY
Sbjct: 517 EEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCAL 576
Query: 373 IVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYK 432
I C+ G A + F +M + GLQP +A + A + G +E A K DK
Sbjct: 577 IDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGM 636
Query: 433 SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKC 492
+ Y+ L + K+ N A N+ M++ G+ ++ Y ++ L S Q A+
Sbjct: 637 MPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARN 696
Query: 493 L 493
L
Sbjct: 697 L 697
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 89/222 (40%), Gaps = 3/222 (1%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L+EM +K V Y+ I C+ + V+MR+V P TY ++
Sbjct: 348 LHEMKANGLKPN---VVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDA 404
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
CK G A+A +L+EE+L + +TY + C G+ A F M+ G+ P
Sbjct: 405 NCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPN 464
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
T+ A + G+ E A + +K +LY + + AK ++
Sbjct: 465 QETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIG 524
Query: 461 EMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSL 502
E+ ++G+ N +Y ++ S Q A L L L
Sbjct: 525 EIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGL 566
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 50/107 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI + + + +L M ++G E Y ++ L +GQ A LL+EM+
Sbjct: 643 YTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMI 702
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
G+ PD + Y I +GK D A N+M KRG+ L+ HA
Sbjct: 703 GKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMITGLSDHA 749
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 87/208 (41%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI C+ + L+ E+ Q G + +TY +L LC+ G+ +A E+ ML
Sbjct: 398 YTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAML 457
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ TY + + + + A + +M ++ ++P L + + G R E
Sbjct: 458 NAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLE 517
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + + +++ ++Y+ L + K+ A +L EM+ GL Y ++
Sbjct: 518 EAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALI 577
Query: 479 KHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
L S A R S + L +V
Sbjct: 578 DGLCKSGLVQEAMHHFGRMSEIGLQPNV 605
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 65/156 (41%)
Query: 319 LVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCR 378
++MR+ P + N +L L K G+ + + ++M TY I I Y C+
Sbjct: 208 FLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCK 267
Query: 379 VGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML 438
G ++A + F QM + G P + T+ + I G+ ++ D +
Sbjct: 268 EGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVIT 327
Query: 439 YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
Y+ L + K A L EM NGL+PNV Y
Sbjct: 328 YNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTY 363
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 54/127 (42%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V+ Y L+ +C+ F+ + L EM G P + Y ++ K+G +A L +
Sbjct: 605 VAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRD 664
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+ D Y I G+ A N ++M+ +G+ P + IK Y+
Sbjct: 665 RMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALG 724
Query: 416 RYEDAYK 422
+ ++A +
Sbjct: 725 KVDEALE 731
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 121/281 (43%), Gaps = 22/281 (7%)
Query: 231 KAFGFLPVLISSKALTKKGIWR------VVEVLNQVGGSCLVSGV---RALIEMFSVLGL 281
K+FG+ P ++ L G+W+ + VL ++ G V LI+ G
Sbjct: 699 KSFGWDPDTVTYNILVD-GLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGD 757
Query: 282 YEMAKYVIKKTERKVS--------YYNILIKEMCRRCDFKGPRDLLVEMRQVGCE--PIT 331
E A+ + +VS Y++LI +C+ R+L+ EM + C+ P
Sbjct: 758 LEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNI 817
Query: 332 LTYNYVLGVLCKNGQDADACELLEEMLGRNCH--PDAITYEIFIVYSCRVGKFDVAFNFF 389
+TYN L LCK A+ACEL+ + + PD +T+ I C+ G+ D A N F
Sbjct: 818 ITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVF 877
Query: 390 NQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKN 449
+ M+ G P + T+ + G + E A+ + DK + + YS+L K
Sbjct: 878 DDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKA 937
Query: 450 NNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
++ A +L M G PNV + ++ L S Q A
Sbjct: 938 SHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEA 978
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 86/214 (40%), Gaps = 35/214 (16%)
Query: 286 KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNG 345
+ V K + V + LI +C+ + RD+L M +G P +TYN ++ LCK+G
Sbjct: 592 EMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSG 651
Query: 346 QDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
+ +AC+ LEEM+ C PD+ITY + CR + D A +++ G P T+
Sbjct: 652 RIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYN 711
Query: 406 AFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKN 465
+ G + K+ A VL EM+
Sbjct: 712 ILVDGLW-----------------------------------KSGQTEQAITVLEEMVGK 736
Query: 466 GLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSS 499
G P+V Y ++ L + A+ L SS
Sbjct: 737 GHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSS 770
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 13/136 (9%)
Query: 296 VSYYNILIKEMCRRCD-------FKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
V+ YNI+++ +CR + F+G EM + G P +TYN ++ LCK+ +
Sbjct: 180 VADYNIVLQSLCRAGETARALEIFRG------EMARDGVAPTIVTYNTIINGLCKSNELG 233
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
EL EE++ R HPD +TY I C+ G + A M R P + T++ I
Sbjct: 234 AGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLI 293
Query: 409 KGYFIFYRYEDAYKYV 424
G R ++A + +
Sbjct: 294 NGLCKVGRIDEARELI 309
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 7/203 (3%)
Query: 283 EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLC 342
EMA+ + T + YN +I +C+ + +L E+ + G P +TYN ++ LC
Sbjct: 206 EMARDGVAPT---IVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLC 262
Query: 343 KNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ--PR 400
K G +A L +M R+C P+ +TY + I C+VG+ D A +M ++ P
Sbjct: 263 KAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPN 322
Query: 401 LATHAAFIKGYFIFYRYEDAYKYV--VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNV 458
+ T+ +F+ G +A + + + S + +S L K A +V
Sbjct: 323 IITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSV 382
Query: 459 LSEMMKNGLRPNVSVYRRVLKHL 481
+M+ G PNV Y ++ L
Sbjct: 383 FDDMIAGGYVPNVITYNALVNGL 405
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 108/232 (46%), Gaps = 10/232 (4%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTERK-------VSYYNILIKEMCRRCDFKGPRDLLVEMRQ 324
LI +G + A+ +I++ RK + YN + +C++ +L+ +R
Sbjct: 292 LINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRD 351
Query: 325 --VGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
+ P T+T++ ++ LCK GQ +AC + ++M+ P+ ITY + C+ K
Sbjct: 352 GSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKM 411
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
+ A MV +G+ P + T++ + + R ++A + + A + + + + ++ +
Sbjct: 412 ERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSI 471
Query: 443 ASLHDKNNNPVMAKNVLSEM-MKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
K++ A + +M +K+GL P+ Y ++ L + + A+ L
Sbjct: 472 IDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEAL 523
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 86/228 (37%), Gaps = 32/228 (14%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN L+ +C+ + ++ M G P +TY+ ++ CK + +A ELL
Sbjct: 395 VITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLH 454
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM-VKRGLQPRLATHAAFIKGYFIF 414
M R C P+ +T+ I C+ + AF F+ M +K GL P T+ I G F
Sbjct: 455 GMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRT 514
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHD--------------------------- 447
R A + D + N + L+ L D
Sbjct: 515 GRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILI 574
Query: 448 ----KNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
K N A + EM+ L+P+V + ++ L + Q A+
Sbjct: 575 AGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAAR 622
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 1/118 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN+L+ +C+ + ++ M G P +TY+ ++ CK +A ELL
Sbjct: 889 VVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLH 948
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM-VKRGLQPRLATHAAFIKGYF 412
M R C P+ +T+ I C+ + AF F+ M +K GL P T+ I G F
Sbjct: 949 GMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLF 1006
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 107/232 (46%), Gaps = 10/232 (4%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTERK-------VSYYNILIKEMCRRCDFKGPRDLLVEMRQ 324
LI +G + A+ +I++ RK + YN + +C++ +L+ +R
Sbjct: 786 LINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRD 845
Query: 325 --VGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
+ P T+T++ ++ LCK GQ +AC + ++M+ P+ +TY + + C+ K
Sbjct: 846 GSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKM 905
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
+ A MV +G+ P + T++ + + ++A + + A + + + + ++ +
Sbjct: 906 ERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSI 965
Query: 443 ASLHDKNNNPVMAKNVLSEM-MKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
K++ A + +M +K+GL P+ Y ++ L + A+ L
Sbjct: 966 IDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVL 1017
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 309 RCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAIT 368
R + G ++L++ +P T +N + L K G D L ML PD +T
Sbjct: 1007 RTGWAGQAEVLLDAMP---DPDTYAFNCCINGLSKLG---DVSRALHRMLELELVPDKVT 1060
Query: 369 YEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ I I +C+ G F+ A F +MV + LQP + T A I G
Sbjct: 1061 FNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDG 1102
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 4/119 (3%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTERKVSY-YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPI 330
LI+ G A+ ++ +Y +N I + + D ++E+ V P
Sbjct: 1001 LIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLELELV---PD 1057
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFF 389
+T+N ++ CK G A L EEM+ +N PD +T+ I C+ G+ + ++
Sbjct: 1058 KVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWDIM 1116
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 2/210 (0%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKT--ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCE 328
A++ + V G + A+ ++ E YN LI+ +C R +L +M + GC
Sbjct: 125 AMVAGYCVTGQLDNARRLVAAMPMEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCV 184
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P +TY +L CK A +LL+EM + C PD +TY + + C+ G+ D A F
Sbjct: 185 PDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEF 244
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
+ G +P ++ +KG R+EDA K + + K + + + +++L S +
Sbjct: 245 LKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCR 304
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A +L ++ K G PN Y +L
Sbjct: 305 RGLVEPAMEILDQIPKYGCTPNSLSYNPIL 334
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 5/214 (2%)
Query: 282 YEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNY 336
+E A+ ++ + RK V +N+LI +CRR + ++L ++ + GC P +L+YN
Sbjct: 273 WEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNP 332
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
+L CK + A +E M+ C+PD ++Y + CR G+ D A +Q+ +G
Sbjct: 333 ILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKG 392
Query: 397 LQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAK 456
P L ++ I G + E+A + + K + YS ++S + A
Sbjct: 393 CTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAI 452
Query: 457 NVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
++ G+RPN +Y +L L H A
Sbjct: 453 KAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSA 486
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 5/212 (2%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPI 330
ALI+ G A+ V+ E V YN ++ C R L+ M EP
Sbjct: 95 ALIKKLCASGRTAEARRVLASCEPDVMSYNAMVAGYCVTGQLDNARRLVAAMPM---EPD 151
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN 390
T TYN ++ LC G+ +A +L++ML R C PD +TY I + +C+ + A +
Sbjct: 152 TYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLD 211
Query: 391 QMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML-YSLLASLHDKN 449
+M +G P + T+ + G R +DA +++ S Y N + Y+++
Sbjct: 212 EMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLK-SLPSYGCEPNTVSYNIVLKGLCTA 270
Query: 450 NNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A+ +++EM + G PNV + ++ L
Sbjct: 271 ERWEDAEKLMAEMSRKGRPPNVVTFNMLISFL 302
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 84/183 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++ C++ + M GC P ++YN +L LC+ G+ A ELL ++
Sbjct: 330 YNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLK 389
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C P I+Y I + GK + A N+MV +GLQP + T++ G R E
Sbjct: 390 DKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIE 449
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A K D + +LY+ + K A ++ + M+ NG PN S Y ++
Sbjct: 450 EAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILI 509
Query: 479 KHL 481
+ L
Sbjct: 510 EGL 512
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 89/214 (41%), Gaps = 35/214 (16%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+++ +C+ + L + GCEP T++YN VL LC + DA +L+ EM
Sbjct: 225 YNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMS 284
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP----------------RLA 402
+ P+ +T+ + I + CR G + A +Q+ K G P ++
Sbjct: 285 RKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMD 344
Query: 403 THAAFIKGYFIFYRYEDAYKY-VVLSADKYKSSSNMLYSLLASLHDKNNNPVM------- 454
AF++ Y D Y +L+A + LL L DK PV+
Sbjct: 345 RAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVI 404
Query: 455 -----------AKNVLSEMMKNGLRPNVSVYRRV 477
A +L+EM+ GL+P++ Y +
Sbjct: 405 DGLTKAGKTEEALELLNEMVTKGLQPDIITYSTI 438
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 83/202 (41%), Gaps = 22/202 (10%)
Query: 230 EKAFGFLPVLISS-------------KALTKKG-IWRVVEVLNQV---GGSCLVSGVRAL 272
++A F+ +++SS AL + G + VE+L+Q+ G + ++ +
Sbjct: 344 DRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTV 403
Query: 273 IEMFSVLGLYEMA-----KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGC 327
I+ + G E A + V K + + Y+ + +CR + +++ +G
Sbjct: 404 IDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGI 463
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
P T+ YN +L LCK A +L M+ C P+ TY I I G A
Sbjct: 464 RPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEARE 523
Query: 388 FFNQMVKRGLQPRLATHAAFIK 409
++ RG+ + + I+
Sbjct: 524 MMAELCSRGVVSKTLVNKGAIR 545
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 92/213 (43%), Gaps = 31/213 (14%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGC------------------------- 327
E V YN+L+K +C+ G + LLVEM GC
Sbjct: 178 EPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRE 237
Query: 328 -----EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
EP+ YN ++ LCK A EL+ EM+ + P+ I+Y I C G+
Sbjct: 238 LAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQI 297
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML-YSL 441
++AF+F QM+KRG P + T ++ +KG F+ DA + N++ Y+
Sbjct: 298 ELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNT 357
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
L + N V A +V S M + G PN+ Y
Sbjct: 358 LVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTY 390
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 113/217 (52%), Gaps = 13/217 (5%)
Query: 279 LGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
+GL + + + ++ E VS YN LI +C+ D+KG +L+ EM + G P ++Y+ ++
Sbjct: 229 VGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLI 288
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC--RVGKFDVAFNFFNQMVKR- 395
VLC +GQ A L +ML R CHP+ T +V C R FD A + +NQM++
Sbjct: 289 NVLCNSGQIELAFSFLTQMLKRGCHPNIYTLS-SLVKGCFLRGTTFD-ALDLWNQMIRGF 346
Query: 396 GLQPRLATHAAFIKGYFIFYRYEDAYKYVVL--SADKYKSSSNM-LYSLLASLHDKNNNP 452
GLQP + + ++G F + + K V + ++ S N+ Y L + K +
Sbjct: 347 GLQPNVVAYNTLVQG---FCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSL 403
Query: 453 VMAKNVLSEMMKNGLRPNVSVYRRVLKHL--HTSHQE 487
A + ++M+ +G PNV VY +++ L H+ +E
Sbjct: 404 DGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKE 440
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 129/326 (39%), Gaps = 35/326 (10%)
Query: 175 VSALC---FLKYMREIMPEFYKNSDICSLVIDNCGRLDDY----ETMRQLLNDF---NV- 223
+S++C +K RE+ F + + +I+ + DY E MR+++ NV
Sbjct: 223 ISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVI 282
Query: 224 -YQVCLN--------EKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIE 274
Y +N E AF FL ++ K+G + L+ + C + G
Sbjct: 283 SYSTLINVLCNSGQIELAFSFLTQML------KRGCHPNIYTLSSLVKGCFLRGT----- 331
Query: 275 MFSVLGLY-EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLT 333
F L L+ +M + + V YN L++ C + + M ++GC P T
Sbjct: 332 TFDALDLWNQMIRGF--GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRT 389
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
Y ++ K G A + +ML C P+ + Y + CR KF A + M
Sbjct: 390 YGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMS 449
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNP 452
K P + T AFIKG R + A K +++ N++ Y+ L K N
Sbjct: 450 KENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRI 509
Query: 453 VMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + E+ G+ + S Y +L
Sbjct: 510 EEAYGLTREIFMRGVEWSSSTYNTLL 535
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 83/204 (40%), Gaps = 52/204 (25%)
Query: 317 DLLVEMRQVGCEPIT-----------------------------------LTYNYVLGVL 341
++ +++ GC+P TYN +L L
Sbjct: 132 EMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKAL 191
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG----- 396
CKN + A +LL EM + C PDA++Y I C VG +VK G
Sbjct: 192 CKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVG-----------LVKEGRELAE 240
Query: 397 -LQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMA 455
+P ++ + A I G + Y+ A++ + +K S + + YS L ++ + +A
Sbjct: 241 RFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELA 300
Query: 456 KNVLSEMMKNGLRPNVSVYRRVLK 479
+ L++M+K G PN+ ++K
Sbjct: 301 FSFLTQMLKRGCHPNIYTLSSLVK 324
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 78/187 (41%), Gaps = 13/187 (6%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVG-CEPITLTYNYVLGVLCKNGQDADACELL 354
V +N IK +C + +M Q C P +TYN +L L K + +A L
Sbjct: 457 VPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLT 516
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
E+ R + TY + SC G +A +M+ G P T I Y
Sbjct: 517 REIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQ 576
Query: 415 YRYEDAYKYVVLSA---DKYK----SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
+ E A + + L + K++ S +N+++ L S + + + ++ L M+ G+
Sbjct: 577 GKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRS-NCREDGVIL----LERMISAGI 631
Query: 468 RPNVSVY 474
P+++ +
Sbjct: 632 VPSIATW 638
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 8/166 (4%)
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK------VSYYNILIKEM 306
++E++++ + V A I+ G + A+ V ++ E++ + YN L+ +
Sbjct: 444 LIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGL 503
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
+ + L E+ G E + TYN +L C G A +L+ +M+ PD
Sbjct: 504 AKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDE 563
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMV--KRGLQPRLATHAAFIKG 410
IT + I+ C+ GK + A + + +R +P + ++ I G
Sbjct: 564 ITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWG 609
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 2/127 (1%)
Query: 289 IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
++ E S YN L+ C L+ +M G P +T N ++ CK G+
Sbjct: 521 MRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAE 580
Query: 349 DACELLEEML--GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAA 406
A ++L+ + R PD I+Y I CR + +M+ G+ P +AT +
Sbjct: 581 RAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSV 640
Query: 407 FIKGYFI 413
I + +
Sbjct: 641 LINCFIL 647
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 2/210 (0%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKT--ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCE 328
A++ + V G + A+ ++ E YN LI+ +C R +L +M + GC
Sbjct: 129 AMVAGYCVTGQLDAARRLVADMPMEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCV 188
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P +TY +L CK A +LL+EM + C PD ITY + + C+ G+ D A F
Sbjct: 189 PDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEF 248
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
+ G +P ++ +KG R+EDA K + + K + + +++L S +
Sbjct: 249 LKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCR 308
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A VL ++ K G PN Y +L
Sbjct: 309 RGLVEPAMEVLDQIPKYGCTPNSLSYNPIL 338
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
MA+ K V +N+LI +CRR + ++L ++ + GC P +L+YN +L CK
Sbjct: 284 MAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCK 343
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
+ A +E M+ R C+PD ++Y + CR G+ D A +Q+ +G P L +
Sbjct: 344 QKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLIS 403
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
+ I G + ++A + + K + YS ++S + + A ++
Sbjct: 404 YNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQ 463
Query: 464 KNGLRPNVSVYRRVLKHLHTSHQEHMA 490
G+RPN +Y +L L + H A
Sbjct: 464 DMGIRPNTVLYNAILLGLCKRRETHNA 490
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 110/247 (44%), Gaps = 15/247 (6%)
Query: 243 KALTKKG----IWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSY 298
+ L ++G R+VE ++ + S ALI+ G A+ V+ E V
Sbjct: 67 RGLVRRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAEARRVLAACEPDVMA 126
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++ C R L+ +M EP + TYN ++ LC G+ +A +L++ML
Sbjct: 127 YNAMVAGYCVTGQLDAARRLVADMPM---EPDSYTYNTLIRGLCGRGRTGNALVVLDDML 183
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R C PD +TY I + +C+ + A ++M +G P + T+ + G R +
Sbjct: 184 RRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVD 243
Query: 419 DAYKYV----VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
DA +++ + S N++ L + + A+ +++EM + G PNV +
Sbjct: 244 DAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWED----AEKLMAEMSQKGYPPNVVTF 299
Query: 475 RRVLKHL 481
++ L
Sbjct: 300 NMLISFL 306
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 89/214 (41%), Gaps = 35/214 (16%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+++ +C+ + L + GCEP T++YN VL LC + DA +L+ EM
Sbjct: 229 YNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMS 288
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP----------------RLA 402
+ P+ +T+ + I + CR G + A +Q+ K G P ++
Sbjct: 289 QKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMD 348
Query: 403 THAAFIKGYFIFYRYEDAYKY-VVLSADKYKSSSNMLYSLLASLHDKNNNPVM------- 454
AF++ Y D Y +L+A + LL L DK PV+
Sbjct: 349 RAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVI 408
Query: 455 -----------AKNVLSEMMKNGLRPNVSVYRRV 477
A +L+EM+ GL+P++ Y +
Sbjct: 409 DGLTKAGKTKEALELLNEMVTKGLQPDIITYSTI 442
Score = 42.0 bits (97), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 53/124 (42%)
Query: 286 KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNG 345
+ V K + + Y+ + +CR + +++ +G P T+ YN +L LCK
Sbjct: 426 EMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRR 485
Query: 346 QDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
+ +A +L M+ C P+ TY I I G A ++ RG+ + +
Sbjct: 486 ETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGVVSKGLINK 545
Query: 406 AFIK 409
A I+
Sbjct: 546 AAIR 549
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 5/203 (2%)
Query: 284 MAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
MA V +K E+ V YN +I +C+ + L EM G P +TYN +L
Sbjct: 219 MAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTIL 278
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
C GQ +A L +EM+GRN PD +T+ I + C+ G A M ++G +
Sbjct: 279 HGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAE 338
Query: 399 PRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNV 458
P T+ A + GY + + ++A K + + K + + Y++L + + K+ AK +
Sbjct: 339 PNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRL 398
Query: 459 LSEMMKNGLRPNVSVYRRVLKHL 481
LSEM + L P+ Y +++ L
Sbjct: 399 LSEMSEKNLTPDTVTYSTLMQGL 421
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K E YN L+ C +L M GC P +YN ++ CK+ + +
Sbjct: 335 KGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNE 394
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A LL EM +N PD +TY + C+VG+ A N F +M GL P L ++ +
Sbjct: 395 AKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLD 454
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
G+ ++A K + ++ + +LY++L +AK + S++ +G+RP
Sbjct: 455 GFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRP 514
Query: 470 NVSVYRRVLKHL 481
++ Y ++K L
Sbjct: 515 DIWTYNVMIKGL 526
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 91/217 (41%), Gaps = 4/217 (1%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
+++ V + V YN ++ C L EM P T+T+N ++ LCK
Sbjct: 259 LSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCK 318
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
G ++A + E M + P+A TY + C + D A M+ +G P L++
Sbjct: 319 EGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSS 378
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
+ I GY R +A + + ++K + + YS L + P A N+ EM
Sbjct: 379 YNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMC 438
Query: 464 KNGLRPNVSVYRRVL----KHLHTSHQEHMAKCLSSR 496
+GL P++ Y +L KH H + K + R
Sbjct: 439 SSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHER 475
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 78/191 (40%), Gaps = 2/191 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N LI +C K L EM G EP ++YN V+ LCKNG A + +M
Sbjct: 169 FNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKME 228
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ +TY I C+ + A F ++MV RG+ P + T+ + G+ +
Sbjct: 229 QNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLN 288
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + + + +++L K A+ V M + G PN Y ++
Sbjct: 289 EATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALM 348
Query: 479 KH--LHTSHQE 487
LH E
Sbjct: 349 DGYCLHNQMDE 359
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 99/205 (48%), Gaps = 4/205 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ L++ +C+ + +L EM G P + Y+ +L CK+G +A +LL+EM
Sbjct: 414 YSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMH 473
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R P+ I Y I I GK +VA F+++ G++P + T+ IKG +
Sbjct: 474 ERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSD 533
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+AY++ D + Y+++ +N + A ++ EM+ + S ++ +L
Sbjct: 534 EAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLL 593
Query: 479 KHLHTSHQEHMAKCL--SSRYSSLS 501
SH E +++ + SS+++ ++
Sbjct: 594 D--LESHDEIISRFMRGSSQHTKMN 616
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N+LI +CR ++ +M ++G +P +T+N ++ LC G+ +A L EM+
Sbjct: 135 NVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVW 194
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
P+ I+Y I C+ G +A F +M + +P + T+ I
Sbjct: 195 SGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTII 243
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 58/161 (36%), Gaps = 35/161 (21%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M G + N ++ LC+ A ++ +M PDAIT+ I C G
Sbjct: 121 QMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEG 180
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
K A FN+MV G +P + ++ I G
Sbjct: 181 KIKEAVGLFNEMVWSGHEPNVISYNTVINGLC---------------------------- 212
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
KN N +MA V +M +N +PNV Y ++ L
Sbjct: 213 -------KNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSL 246
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 127/282 (45%), Gaps = 28/282 (9%)
Query: 206 GRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISS----KALTKKGIWRVVEVL--NQ 259
GR+DD R+ LN + Y GF P +S K L W VE L
Sbjct: 260 GRVDD---AREFLNRLSSY---------GFQPDTVSYTTVLKGLCAAKRWEDVEELFAEM 307
Query: 260 VGGSCLVSGVR--ALIEMFSVLGLYEMAKYVIKKTE-----RKVSYYNILIKEMCRRCDF 312
+ +C+ + V L+ F G+ E A V+++ + NI+I +C++
Sbjct: 308 MEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRV 367
Query: 313 KGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIF 372
L M GC P T++Y VL LC+ + DA ELL+EM+ +NC P+ +T+ F
Sbjct: 368 DDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTF 427
Query: 373 IVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYK 432
I C+ G + A QM + G + + T+ A + G+ + R + A + + + K
Sbjct: 428 ICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALE--LFYSMPCK 485
Query: 433 SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
++ +LL L + A+ +L+EM++ PNV +
Sbjct: 486 PNTITYTTLLTGLCNAERLDAAAE-LLAEMLQKDCAPNVVTF 526
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 97/224 (43%), Gaps = 2/224 (0%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKK--TERKVSYYNILIKEMCRR 309
RV+ + G + V L+ + G + A+ +I Y +I+ +C R
Sbjct: 130 RVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDR 189
Query: 310 CDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITY 369
LL +M GC+P +TY +L +CK+ A E+L+EM + C P+ +TY
Sbjct: 190 GRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTY 249
Query: 370 EIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSAD 429
+ I CR G+ D A F N++ G QP ++ +KG R+ED + +
Sbjct: 250 NVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMME 309
Query: 430 KYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
K + + + +L + A VL +M +G N ++
Sbjct: 310 KNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTL 353
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 127/300 (42%), Gaps = 23/300 (7%)
Query: 194 NSDICSLVIDNC---GRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGI 250
N+ +C++VI+ GR+DD Q LN+ Y + + VL K L +
Sbjct: 350 NTTLCNIVINTICKQGRVDD---AFQFLNNMGSYGC--SPDTISYTTVL---KGLCRAER 401
Query: 251 WRVVEVL--NQVGGSCLVSGV--RALIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNI 301
W + L V +C + V I + GL E A +I++ E + YN
Sbjct: 402 WEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNA 461
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
L+ C + +L M C+P T+TY +L LC + A ELL EML ++
Sbjct: 462 LVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKD 518
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
C P+ +T+ + + + C+ G D A QM++ G P L T+ + G E+A
Sbjct: 519 CAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEAL 578
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + S + YS + + + + A + + G+RP +Y ++L L
Sbjct: 579 ELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLAL 638
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 118/277 (42%), Gaps = 3/277 (1%)
Query: 207 RLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLV 266
R + +E ++LL + NE F ++ K L ++ ++E +++ G +
Sbjct: 398 RAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATM-LIEQMSEHGCEVNI 456
Query: 267 SGVRALIEMFSVLGLYEMAKYVIKKTERKVSY--YNILIKEMCRRCDFKGPRDLLVEMRQ 324
AL+ F V G + A + K + Y L+ +C +LL EM Q
Sbjct: 457 VTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQ 516
Query: 325 VGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
C P +T+N ++ C+ G +A EL+E+M+ C P+ ITY + + +
Sbjct: 517 KDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEE 576
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLAS 444
A + +V G+ P + T+++ I R E+A K + D ++Y+ +
Sbjct: 577 ALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILL 636
Query: 445 LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K N A + + M+ NG PN Y +++ L
Sbjct: 637 ALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGL 673
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 81/206 (39%), Gaps = 42/206 (20%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVG--------------------------------CEP 329
LI+ +CRR +L + G P
Sbjct: 115 LIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVAP 174
Query: 330 ITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFF 389
TY ++ LC G+ +A LL++ML R C P +TY + + C+ F A
Sbjct: 175 DAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVL 234
Query: 390 NQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV-VLSADKYK----SSSNMLYSLLAS 444
++M +G P + T+ I G R +DA +++ LS+ ++ S + +L L A+
Sbjct: 235 DEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAA 294
Query: 445 LHDKNNNPVMAKNVLSEMMKNGLRPN 470
++ + + +EMM+ PN
Sbjct: 295 KRWED-----VEELFAEMMEKNCMPN 315
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 60/159 (37%), Gaps = 3/159 (1%)
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
LC+ G+ +DA +L D Y + CR G+ D A M + P
Sbjct: 119 LCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPD 175
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
T+ I+G R +A + + S + Y++L K+ A VL
Sbjct: 176 AYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLD 235
Query: 461 EMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSS 499
EM G PN+ Y ++ + + A+ +R SS
Sbjct: 236 EMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSS 274
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 88/192 (45%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
M ++K V +N +I C+R L+ M G P +TYN VL LCK
Sbjct: 347 MNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCK 406
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
G+ + E EEM+ + C P+AITY I I C++ + + A +M + GL P +
Sbjct: 407 AGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTIS 466
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
I G+ + AY +K S++ +++L + N MA+ + EM+
Sbjct: 467 FNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMI 526
Query: 464 KNGLRPNVSVYR 475
G +P++ YR
Sbjct: 527 SKGYKPDLYTYR 538
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 83/204 (40%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI +C D + +L E + +P + YN ++ LC+ G A +++ EM+
Sbjct: 257 YCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMV 316
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
CHPD TY I I C++G A N + +G P + T I GY + +
Sbjct: 317 EDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLD 376
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + V + + Y+ + + K EM+ G RPN Y ++
Sbjct: 377 SALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILI 436
Query: 479 KHLHTSHQEHMAKCLSSRYSSLSL 502
++ +Q A + R S L
Sbjct: 437 ENFCKINQLEEASGVIVRMSQDGL 460
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN L++ +C+ + L M GC P TYN ++ CK +A ELL+
Sbjct: 184 VVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLK 243
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ + + PD +TY I C G + A FN+ + L+P L + + +KG
Sbjct: 244 DAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKG 298
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 76/182 (41%), Gaps = 1/182 (0%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
NI I+ +C + LVE P +TYN ++ LCK+ + +A + L M+
Sbjct: 154 NIWIRGLCEGGRLEEAV-ALVESMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMN 212
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
+ C PD TY I C+ A + +G P T+ + I G E
Sbjct: 213 QGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVER 272
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
A + + K ++Y+ L + + A V++EM+++G P++ Y V+
Sbjct: 273 ALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVIN 332
Query: 480 HL 481
L
Sbjct: 333 GL 334
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 82/200 (41%), Gaps = 37/200 (18%)
Query: 288 VIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQD 347
++K YNILI+ C+ + ++V M Q G P T+++N ++ C+NG
Sbjct: 421 ILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDL 480
Query: 348 ADACELLEEMLGRNCHPDAITYEIFI-VYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAA 406
A L +++ + A T+ I I YS ++ +A F +M+ +G +P L T+
Sbjct: 481 DGAYLLFQKLDEKGYSATADTFNILIGAYSSKL-NMQMAEKIFGEMISKGYKPDLYTYRV 539
Query: 407 FIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNG 466
+ G + AY + L+EM+ G
Sbjct: 540 LVDGSCKAANVDRAYVH-----------------------------------LAEMVSKG 564
Query: 467 LRPNVSVYRRVLKHLHTSHQ 486
P+++ + RVL L +H+
Sbjct: 565 FVPSMATFGRVLNSLAMNHR 584
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 49/112 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I C+R + +LL + G P +TY ++ LC G A EL E
Sbjct: 222 YNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQ 281
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
++ PD + Y + CR G A N+MV+ G P + T+ I G
Sbjct: 282 AKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVING 333
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 1/161 (0%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
LL + + GC+ L Y V+ L +G DA L +EML R+ PD T+ + C
Sbjct: 67 LLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALC 126
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ G + +++KRG+ T +I+G R E+A +V S D Y + +
Sbjct: 127 QKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVA-LVESMDAYIAPDVV 185
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
Y+ L K++ A L MM G P+ Y ++
Sbjct: 186 TYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTII 226
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 67/159 (42%), Gaps = 1/159 (0%)
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
R L EM + P T+N VL LC+ G ++ LL ++L R + T I+I
Sbjct: 100 RHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRG 159
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
C G+ + A M + P + T+ ++G + ++A +Y+ ++
Sbjct: 160 LCEGGRLEEAVALVESM-DAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPD 218
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ Y+ + + K + A +L + + G P+ Y
Sbjct: 219 DFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTY 257
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 38/99 (38%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M GC P YN ++ L A ++ ML PDA T+ + I C G+
Sbjct: 1 MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGR 60
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
VA + +RG + + ++G + DA
Sbjct: 61 PHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDA 99
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 113/255 (44%), Gaps = 10/255 (3%)
Query: 234 GFLPVLISSKALTK--------KGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMA 285
G +P +I+ +L + + R++E+L G V LI + G + A
Sbjct: 137 GDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKA 196
Query: 286 KYVIKK--TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
V+++ V YN +++ +C K ++L Q C P +TY ++ C
Sbjct: 197 LQVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCN 256
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
+ A +LL+EM + C PD +TY + I C+ G+ D A F N M G QP + T
Sbjct: 257 DSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVIT 316
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
H ++ R+ DA + + K S S + +++L + + A +VL +M
Sbjct: 317 HNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMP 376
Query: 464 KNGLRPNVSVYRRVL 478
K+G PN Y +L
Sbjct: 377 KHGCMPNSLSYNPLL 391
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 84/198 (42%), Gaps = 35/198 (17%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
+A + K V +NILI +CR+ D+L +M + GC P +L+YN +L C+
Sbjct: 337 LADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQ 396
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
+ A E LE M+ R C+PD +TY + C+ GK D A NQ+ +G P L T
Sbjct: 397 EKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLIT 456
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
+ I G + E A +L EM
Sbjct: 457 YNTVIDGLTKVGKTE-----------------------------------YAAELLEEMR 481
Query: 464 KNGLRPNVSVYRRVLKHL 481
+ GL+P++ Y +L+ L
Sbjct: 482 RKGLKPDIITYSTLLRGL 499
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 85/177 (48%), Gaps = 2/177 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ C+ + L M GC P +TYN +L LCK+G+ A E+L ++
Sbjct: 387 YNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLS 446
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C P ITY I +VGK + A +M ++GL+P + T++ ++G + +
Sbjct: 447 SKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVD 506
Query: 419 DAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+A K + + K S+ +++ L K A + L+ M++ G +P + Y
Sbjct: 507 EAIKIFHDMEGLSIKPSAVTYNAIMLGLC-KAQQTSRAIDFLAYMVEKGCKPTKATY 562
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 60/112 (53%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I + + + +LL EMR+ G +P +TY+ +L L G+ +A ++ +M
Sbjct: 457 YNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDME 516
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
G + P A+TY ++ C+ + A +F MV++G +P AT+ I+G
Sbjct: 517 GLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEG 568
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 74/175 (42%), Gaps = 3/175 (1%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
NI ++++ R + + L M G P + ++ C++G+ A ++E +
Sbjct: 111 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILEN 170
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
PD ITY + I C+ G+ D A +M + P + T+ ++ + ++
Sbjct: 171 SGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKE 227
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
A + + + + Y++L ++ A +L EM K G +P+V Y
Sbjct: 228 AMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTY 282
Score = 45.1 bits (105), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 9/139 (6%)
Query: 244 ALTKKG-IWRVVEVLNQV---GGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK---- 295
AL K G VE+LNQ+ G S ++ +I+ + +G E A ++++ RK
Sbjct: 428 ALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKP 487
Query: 296 -VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
+ Y+ L++ + + +M + +P +TYN ++ LCK Q + A + L
Sbjct: 488 DIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFL 547
Query: 355 EEMLGRNCHPDAITYEIFI 373
M+ + C P TY I I
Sbjct: 548 AYMVEKGCKPTKATYTILI 566
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 92/188 (48%), Gaps = 8/188 (4%)
Query: 295 KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
KV YYNILI + C+ + + + E+R+ G P T+++N ++ LCK+ + L
Sbjct: 222 KVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLK 281
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
+ M +PD TY + I C+ G+ DVA F++M +RGL+P T A I G +
Sbjct: 282 KTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRS 341
Query: 415 YRYEDA----YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
R + A ++ + + N L + L + D N A+ ++ EM G++P+
Sbjct: 342 RRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNK----ARKLVDEMKMVGMKPD 397
Query: 471 VSVYRRVL 478
Y ++
Sbjct: 398 KITYTTLI 405
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 80/166 (48%), Gaps = 7/166 (4%)
Query: 247 KKGIWRVVEVLNQVGGSCLVSGV-RALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKE 305
+KG+ VL+ V + L+SG R + L EM + +K + + Y ++I
Sbjct: 421 RKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDD---ATYTMVIDG 477
Query: 306 MCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPD 365
C++ + K LL EM+ G +P +TYN ++ LCK GQ +A LLE ML PD
Sbjct: 478 YCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPD 537
Query: 366 AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
ITY I + C+ GK + N+ +GL A + + + Y
Sbjct: 538 DITYNILLEGHCKNGKAEDLLKLRNE---KGLIVDYAYYTSLVSEY 580
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ +C+ D R L+ EM+ VG +P +TY ++ CK G A E+ + M
Sbjct: 366 YNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMN 425
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
D + + I CR G+ A +MV+ G++P AT+ I GY
Sbjct: 426 EEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGY 478
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M +G +P + YN +L LCK G A +L++EM PD ITY I C+ G
Sbjct: 353 QMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEG 412
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+ A M + G+ A I G+ R DA + + + + Y+
Sbjct: 413 DLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYT 472
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
++ + K N M +L EM NG +P V Y ++ L Q A L
Sbjct: 473 MVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANML 525
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 66/168 (39%), Gaps = 2/168 (1%)
Query: 336 YVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR 395
Y+L + + E+L P Y I I C+ G A FN++ KR
Sbjct: 193 YLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKR 252
Query: 396 GLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMA 455
GL+P + I G ++ ++ + YS+L K +A
Sbjct: 253 GLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVA 312
Query: 456 KNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLG 503
+ + EM + GLRPN + ++ + S + M +++ + L++G
Sbjct: 313 EQLFDEMQQRGLRPNGITFTALIDGQYRSRR--MDSAMNTYHQMLTMG 358
>gi|147862837|emb|CAN78368.1| hypothetical protein VITISV_028672 [Vitis vinifera]
Length = 927
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 154/359 (42%), Gaps = 10/359 (2%)
Query: 128 ATPKQVSEI---IELLRSGDSETESKLLSMSVSLSNASVIEILRVLNSEKVSALCFLKYM 184
A P++VS + I+ L + D E+ L +V LS+A V+ +L + A F +
Sbjct: 200 ADPEEVSRVCRVIDELFALDRNMEAVLDECNVDLSHALVVGVLERFKHARKPAFRFFCWA 259
Query: 185 REIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKA 244
+ F NS + ++ GR +E+M +L + + L + F ++
Sbjct: 260 GQ-KAGFTHNSRTYNAMMSVLGRTRQFESMMGMLGEMG-EKGLLTMETFSIAIKAFAAAK 317
Query: 245 LTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVS----YYN 300
KK + V E++ + V + L++ L + A+ + +K E + + Y
Sbjct: 318 ERKKAV-GVFELMKRYNFDAGVDTINCLLDNLGRAKLGKEAQALFEKLEDRFTPNLRTYT 376
Query: 301 ILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGR 360
+L+ CR + EM G +P + ++ +L L K + +DA +L E M +
Sbjct: 377 VLLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAK 436
Query: 361 NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
P+ TY I I C+ K A +F++MV G QP A + I G+ + +
Sbjct: 437 GPSPNVRTYTILIRDLCKQMKMKEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKV 496
Query: 421 YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
Y + +K + Y+ L L P A + +M++NG++P + Y ++K
Sbjct: 497 YALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQPTLHTYNMMMK 555
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/149 (20%), Positives = 65/149 (43%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
LL EM++ GC TYN ++ ++ DA + ++M+ P TY + +
Sbjct: 499 LLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQPTLHTYNMMMKSYF 558
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+++ + +M ++G P ++ FI G R E+A +Y+ +K + +
Sbjct: 559 YTRNYEMGCAVWKEMGRKGCCPDDNSYIVFIGGLIRHGRSEEACRYLEEMIEKGMKAPQL 618
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNG 466
Y+ A+ + P + + + +M G
Sbjct: 619 DYNKFAADFSRAGKPDILEELARKMKFEG 647
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 100/214 (46%), Gaps = 2/214 (0%)
Query: 263 SCLVSGVRALIEMFSVLGLYEMAKYVIKK--TERKVSYYNILIKEMCRRCDFKGPRDLLV 320
S L+ VR L + L Y++ KK ++ YN LI E+ + DL
Sbjct: 753 SFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFK 812
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M+ VGC P T+N +L V K+G+ + EL +EM+ R C PDAITY I I +
Sbjct: 813 DMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSN 872
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
D A +FF +V +P T+ I G R E+A + +D + +++
Sbjct: 873 NLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFN 932
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+L + + K + A + M+ G+RP++ Y
Sbjct: 933 ILINGYGKIGDTETACQLFKRMVNEGIRPDLKSY 966
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V + IL+ +C+ DF MR+ G P TYN ++ L + G+ DA +LL+
Sbjct: 367 VVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLD 426
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M P A TY FI Y + G+ A F +M +G+ P + A +
Sbjct: 427 TMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMG 486
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R +A + + ++ Y+++ + K A N+LSEM++NG P+V V
Sbjct: 487 RLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVN 546
Query: 476 RVLKHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
++ L+ + + A + R + L +V
Sbjct: 547 SLIDSLYKAGRVDEAWQMFDRMKDMKLSPTV 577
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 82/197 (41%), Gaps = 13/197 (6%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI + + + L EM GC+P +N ++ K G AC+L + M+
Sbjct: 896 YGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMV 955
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD +Y I + C G+ D A +FN++ GL P + I G R E
Sbjct: 956 NEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRME 1015
Query: 419 DA------YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
+A + + D Y +S ML LA + ++ AK + E+ GL P+V
Sbjct: 1016 EALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQ------AKRMYEELQLAGLEPDVF 1069
Query: 473 VYRRVLKHLHTSHQ-EH 488
Y +++ S EH
Sbjct: 1070 TYNALIRGYSLSENPEH 1086
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 69/173 (39%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +LI +C + ++L V+M+ G +P + Y +L G E +M
Sbjct: 300 YTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQME 359
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD +T+ I + C+ FD AF F+ M K+G+ P L T+ I G R E
Sbjct: 360 ADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIE 419
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
DA K + + Y K+ A +M G+ PN+
Sbjct: 420 DALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNI 472
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
+R+ G P ++TYN ++ K GQ +A LL EM+ C PD I I + G+
Sbjct: 498 LRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGR 557
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
D A+ F++M L P + T+ + G R + A + K S + + ++
Sbjct: 558 VDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNT 617
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
L KN+ +A + S+M +P+V Y V+ L
Sbjct: 618 LLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGL 657
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 163/401 (40%), Gaps = 29/401 (7%)
Query: 92 NLYFSNCNGSCRSQISK-LGLLTSRCISSFAMVNGPYATPKQVSEIIELLRSGDSETESK 150
+Y S+CN S R I + LG + ++ +MVN K+ + R E
Sbjct: 24 QVYVSSCNRSSRGLIWESLGDFQT---ATLSMVNWKKHRKKRK----DFCRLALQNPEQV 76
Query: 151 LLSMSVSLSNASVIEILRVLNS--EKVSALCFLKYMREIMPEFYKNSDICSLVIDNCGRL 208
++ + S E+L VL S + + AL + + E P ++ C+ +++
Sbjct: 77 MVVKGKTEIRVSEDEVLGVLKSMTDPIRALSYFYSISEF-PTVLHTTETCNFMLEFLRVH 135
Query: 209 DDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALT-KKGIWRVVEVLNQVGGSCLVS 267
D E M + F Q + + L KAL+ + G+ ++ VLN++ + V
Sbjct: 136 DKVEDMAAV---FEFMQKKIIRRDLD--TYLTIFKALSIRGGLRQMTTVLNKMRKAGFVL 190
Query: 268 GV---RALIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNILIKEMCRRCDFKGPRDLL 319
LI + G A V ++ + + Y+ L+ + ++ D + LL
Sbjct: 191 NAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLL 250
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
EM +G P T+ + VL + G+ +A E+ M C PD +TY + I C
Sbjct: 251 KEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNA 310
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK--YVVLSADKYKSSSNM 437
G+ + A F +M G +P + + + F D +K + + AD Y +
Sbjct: 311 GQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDL-DTFKEFWSQMEADGYMPDV-V 368
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+++L + K + A M K G+ PN+ Y ++
Sbjct: 369 TFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLI 409
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 90/212 (42%), Gaps = 1/212 (0%)
Query: 281 LYEMAKYVI-KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
L+E+ K +I ++ + YNI+I + + + D ++ P TY ++
Sbjct: 842 LFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLID 901
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
L K G+ +A L EEM C P+ + I I ++G + A F +MV G++P
Sbjct: 902 GLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRP 961
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
L ++ + + R ++A Y + Y+ + + K+ A +
Sbjct: 962 DLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALY 1021
Query: 460 SEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
+EM G+ P++ Y ++ +L + AK
Sbjct: 1022 NEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAK 1053
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN L+ + + + +L M C P T+++N +L CKN + A ++
Sbjct: 577 VVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFS 636
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+M +C PD +TY I + K + AF FF+Q+ K+ + P T + G
Sbjct: 637 KMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQL-KKSMHPDHVTICTLLPG 690
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 80/215 (37%), Gaps = 35/215 (16%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM- 357
YN LI + R + LL M VG +P TY + K+G+ A E E+M
Sbjct: 405 YNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMK 464
Query: 358 --------------------LGR--------------NCHPDAITYEIFIVYSCRVGKFD 383
+GR PD++TY + + +VG+ D
Sbjct: 465 AKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVD 524
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
A N ++M++ G +P + + I + R ++A++ D S + + Y+ L
Sbjct: 525 EAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLL 584
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
S K A + M+ PN + +L
Sbjct: 585 SGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLL 619
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 55/123 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y IL+ +C E++ G +P + YN ++ L K+ + +A L EM
Sbjct: 966 YTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMR 1025
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R PD TY ++ G + A + ++ GL+P + T+ A I+GY + E
Sbjct: 1026 NRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPE 1085
Query: 419 DAY 421
AY
Sbjct: 1086 HAY 1088
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 100/214 (46%), Gaps = 2/214 (0%)
Query: 263 SCLVSGVRALIEMFSVLGLYEMAKYVIKK--TERKVSYYNILIKEMCRRCDFKGPRDLLV 320
S L+ VR L + L Y++ KK ++ YN LI E+ + DL
Sbjct: 753 SFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFK 812
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M+ VGC P T+N +L V K+G+ + EL +EM+ R C PDAITY I I +
Sbjct: 813 DMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSN 872
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
D A +FF +V +P T+ I G R E+A + +D + +++
Sbjct: 873 NLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFN 932
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+L + + K + A + M+ G+RP++ Y
Sbjct: 933 ILINGYGKIGDTETACQLFKRMVNEGIRPDLKSY 966
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 93/211 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V + IL+ +C+ DF MR+ G P TYN ++ L + G+ DA +LL
Sbjct: 367 VVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLG 426
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M P A TY IFI Y + G+ A F +M +G+ P + A +
Sbjct: 427 TMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMG 486
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R +A + + ++ Y+++ + K A N+LSEM++NG P+V V
Sbjct: 487 RLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVN 546
Query: 476 RVLKHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
++ L+ + + A + R + L +V
Sbjct: 547 SLIDSLYKAGRVDEAWQMFDRMKDMKLSPTV 577
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 71/173 (41%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +LI +C + ++L V+M+ G +P + Y +L G E +M
Sbjct: 300 YTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQME 359
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD +T+ I + C+ FD AF F+ M K+G+ P L T+ I G R E
Sbjct: 360 ADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIE 419
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
DA K + + Y++ K+ A +M G+ PN+
Sbjct: 420 DALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNI 472
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 82/197 (41%), Gaps = 13/197 (6%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI + + + L EM GC+P +N ++ K G AC+L + M+
Sbjct: 896 YGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMV 955
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD +Y I + C G+ D A +FN++ GL P + I G R E
Sbjct: 956 NEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRME 1015
Query: 419 DA------YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
+A + + D Y +S ML LA + ++ AK + E+ GL P+V
Sbjct: 1016 EALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQ------AKRMYEELQLAGLEPDVF 1069
Query: 473 VYRRVLKHLHTSHQ-EH 488
Y +++ S EH
Sbjct: 1070 TYNALIRGYSLSENPEH 1086
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 73/160 (45%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
+R+ G P ++TYN ++ K GQ +A LL EM+ C PD I I + G+
Sbjct: 498 LRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGR 557
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
D A+ F++M L P + T+ + G R + A + +K S + + ++
Sbjct: 558 VDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNT 617
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
L KN+ +A + S+M +P+V Y V+ L
Sbjct: 618 LLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGL 657
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 163/401 (40%), Gaps = 29/401 (7%)
Query: 92 NLYFSNCNGSCRSQISK-LGLLTSRCISSFAMVNGPYATPKQVSEIIELLRSGDSETESK 150
+Y S+CN S R I + LG + ++ +MVN K+ + R E
Sbjct: 24 QVYVSSCNRSSRGLIWESLGDFQT---ATLSMVNWKKHRKKRK----DFCRLALQNPEQV 76
Query: 151 LLSMSVSLSNASVIEILRVLNS--EKVSALCFLKYMREIMPEFYKNSDICSLVIDNCGRL 208
++ + S E+L VL S + + AL + + E P ++ C+ +++
Sbjct: 77 MVVKGKTEIRVSEDEVLGVLKSMTDPIRALSYFYSISEF-PTVLHTTETCNFMLEFLRVH 135
Query: 209 DDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALT-KKGIWRVVEVLNQVGGSCLVS 267
D E M + F Q + + L KAL+ + G+ ++ VLN++ + V
Sbjct: 136 DKVEDMAAV---FEFMQKKIIRRDLD--TYLTIFKALSIRGGLRQMTTVLNKMRKAGFVL 190
Query: 268 GV---RALIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNILIKEMCRRCDFKGPRDLL 319
LI + G A V ++ + + Y+ L+ + ++ D + LL
Sbjct: 191 NAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLL 250
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
EM +G P T+ + VL + G+ +A E+ M C PD +TY + I C
Sbjct: 251 KEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNA 310
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK--YVVLSADKYKSSSNM 437
G+ + A F +M G +P + + + F D +K + + AD Y +
Sbjct: 311 GQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDL-DTFKEFWSQMEADGYMPDV-V 368
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+++L + K + A M K G+ PN+ Y ++
Sbjct: 369 TFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLI 409
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 90/212 (42%), Gaps = 1/212 (0%)
Query: 281 LYEMAKYVI-KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
L+E+ K +I ++ + YNI+I + + + D ++ P TY ++
Sbjct: 842 LFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLID 901
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
L K G+ +A L EEM C P+ + I I ++G + A F +MV G++P
Sbjct: 902 GLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRP 961
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
L ++ + + R ++A Y + Y+ + + K+ A +
Sbjct: 962 DLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALY 1021
Query: 460 SEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
+EM G+ P++ Y ++ +L + AK
Sbjct: 1022 NEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAK 1053
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 82/215 (38%), Gaps = 35/215 (16%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM- 357
YN LI + R + LL M VG +P TYN + K+G+ A E E+M
Sbjct: 405 YNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMK 464
Query: 358 --------------------LGR--------------NCHPDAITYEIFIVYSCRVGKFD 383
+GR PD++TY + + +VG+ D
Sbjct: 465 AKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVD 524
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
A N ++M++ G +P + + I + R ++A++ D S + + Y+ L
Sbjct: 525 EAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLL 584
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
S K A + M++ PN + +L
Sbjct: 585 SGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLL 619
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN L+ + + + +L M + C P T+++N +L CKN + A ++
Sbjct: 577 VVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFS 636
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+M +C PD +TY I + K + AF FF+Q+ K+ + P T + G
Sbjct: 637 KMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQL-KKSMHPDHVTICTLLPG 690
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 55/123 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y IL+ +C E++ G +P + YN ++ L K+ + +A L EM
Sbjct: 966 YTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMR 1025
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R PD TY ++ G + A + ++ GL+P + T+ A I+GY + E
Sbjct: 1026 NRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPE 1085
Query: 419 DAY 421
AY
Sbjct: 1086 HAY 1088
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%)
Query: 279 LGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
LG +AK + + + + LI +C+ +F +L +M GC+P TYN ++
Sbjct: 146 LGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTII 205
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
LCK G+ A A LL++M C P+ +TY I CR + A + F+ M +G+
Sbjct: 206 NGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGIS 265
Query: 399 PRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNV 458
P + T+ + I+G F R+++A + + +++L K A V
Sbjct: 266 PDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGV 325
Query: 459 LSEMMKNGLRPNVSVYRRVL 478
L M + G+ PNV Y ++
Sbjct: 326 LKTMTEMGVEPNVVTYSSLM 345
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 5/205 (2%)
Query: 279 LGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLT 333
+G A ++KK E + Y+ LI +CR D+ M+ G P T
Sbjct: 211 IGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFT 270
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
Y ++ LCK + +A LL EM N PD +T+ + + C+ GK A M
Sbjct: 271 YTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMT 330
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPV 453
+ G++P + T+++ + GY ++ +A K + K + Y++L + + K
Sbjct: 331 EMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRID 390
Query: 454 MAKNVLSEMMKNGLRPNVSVYRRVL 478
A + +EM+ GL PN Y ++
Sbjct: 391 EAMQLFNEMIHQGLTPNNVSYNTLI 415
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 85/189 (44%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V Y+ L+ D R L M GC+P +YN ++ CK + +A +
Sbjct: 335 EPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQ 394
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
L EM+ + P+ ++Y I C++GK A + F M G P L T++ + G+
Sbjct: 395 LFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFC 454
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
A++ Y + ++Y++L K+ N A+ + SE+ GL+P+V
Sbjct: 455 KQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQ 514
Query: 473 VYRRVLKHL 481
+Y ++ L
Sbjct: 515 LYTTIINGL 523
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y IL+ MC+ + K R L E+ G +P Y ++ LCK G +A E M
Sbjct: 481 YTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNME 540
Query: 359 GRNCHPDAITYEIFI 373
C PD I+Y + I
Sbjct: 541 ADGCPPDEISYNVII 555
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 78/183 (42%), Gaps = 2/183 (1%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M VG P T + + C+ + +L +++ P +T+ I C+VG
Sbjct: 118 QMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVG 177
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML-Y 439
+F A F+ MV +G QP + T+ I G A ++ ++ NM+ Y
Sbjct: 178 EFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAG-LLKKMEEAGCQPNMVTY 236
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSS 499
S L ++ A ++ S M G+ P++ Y +++ L + A L + +S
Sbjct: 237 STLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTS 296
Query: 500 LSL 502
L++
Sbjct: 297 LNI 299
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 3/131 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+IL+ C++ L M+ +P + Y ++ +CK+G DA +L E+
Sbjct: 446 YSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELF 505
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P Y I C+ G D A F M G P ++ I+G +++
Sbjct: 506 VQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRG---LLQHK 562
Query: 419 DAYKYVVLSAD 429
D + ++L +
Sbjct: 563 DESRALLLVGE 573
>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 806
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 160/364 (43%), Gaps = 54/364 (14%)
Query: 158 LSNASVIEILRVLNSEKVSALCFLKYMREIMPEFYKNSDIC-SLVIDNCGRLDDYETMRQ 216
+S + V+++LR + VS+L + K + +K++ + +ID GR ++ + +
Sbjct: 39 VSESHVVKVLR-QEHDIVSSLEYFKSLSN--SGTFKHTHLTYETMIDKLGRNNEMDGVSY 95
Query: 217 LLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGI---WRV--------VEVLNQVGGSCL 265
LL + V +++ F F+ L ++G+ +R+ V++ N V + L
Sbjct: 96 LLQQMKLENVPCSQELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALL 155
Query: 266 VSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
+ +I LY K + E V YN+L+K +C+ G LLVEM
Sbjct: 156 SQNLFKMIN-----ALYNNMKS--EGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNK 208
Query: 326 GCEPITLTYNYVLGVLCKNGQDAD-------------------------------ACELL 354
GC+P ++Y V+ +CK G D D A +L+
Sbjct: 209 GCDPDDVSYTTVISSMCKLG-DVDKARELAMKFEPVVPVYNALIHGVCKECRFKEAFDLM 267
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
EM+ R P+ I+Y I +G +++ F +M RG +P + T + IKG+F+
Sbjct: 268 NEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVR 327
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
R DA L + S + + Y+ L + N A +V ++M K+ +RPNV+ Y
Sbjct: 328 GRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTY 387
Query: 475 RRVL 478
++
Sbjct: 388 STII 391
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 5/187 (2%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V YN+++ + + FK L M+ G EP TYN +L LC+NG+ AC+
Sbjct: 141 EPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACK 200
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
LL EM + C PD ++Y I C++G D A + + +P + + A I G
Sbjct: 201 LLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKA-----RELAMKFEPVVPVYNALIHGVC 255
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
R+++A+ + D+ + + YS + S N ++ V M G RPNV
Sbjct: 256 KECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQ 315
Query: 473 VYRRVLK 479
+ ++K
Sbjct: 316 TFTSLIK 322
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 2/197 (1%)
Query: 279 LGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
LG + A+ + K E V YN LI +C+ C FK DL+ EM G +P ++Y+ V+
Sbjct: 227 LGDVDKARELAMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVI 286
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
L G + + M R C P+ T+ I G+ A +N M++ G+
Sbjct: 287 SCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVS 346
Query: 399 PRLATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKN 457
P + + I G ++A + + D + + YS + K+ + V A
Sbjct: 347 PNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTT-YSTIIYGFAKSGDLVSACE 405
Query: 458 VLSEMMKNGLRPNVSVY 474
++M+ G RPNV VY
Sbjct: 406 TWNKMINCGCRPNVVVY 422
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 82/198 (41%), Gaps = 17/198 (8%)
Query: 254 VEVLNQVGGSCLVSGVRALIEMFSVL--------------GLYEMAKYVIKKTERKVSYY 299
VE+ V G V G R ++ F+ L GL+ + + + V Y
Sbjct: 295 VELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLM--IREGVSPNVVAY 352
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N LI +C + + +M + P TY+ ++ K+G ACE +M+
Sbjct: 353 NTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMIN 412
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
C P+ + Y + C++ FD AF+ + M+ G P + T FIKG R E
Sbjct: 413 CGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEW 472
Query: 420 AYKYVVLSADKYKSSSNM 437
A V+ +KY+ N+
Sbjct: 473 AMN-VLDQMEKYECLPNI 489
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 57/125 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V+ Y+ +I + D + +M GC P + Y ++ VLC+ A +L++
Sbjct: 384 VTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLID 443
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+ C P IT+ FI CR G+ + A N +QM K P + T+ + G F
Sbjct: 444 NMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRAN 503
Query: 416 RYEDA 420
+ +A
Sbjct: 504 AFREA 508
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 79/185 (42%), Gaps = 1/185 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +N IK +CR + ++L +M + C P TYN +L L + +AC L+
Sbjct: 454 VITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIR 513
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
E+ R D +TY + G +M+ G++ T + Y
Sbjct: 514 ELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLG 573
Query: 416 RYEDAYKYVV-LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + A K + +SA+K + + ++++ A L EM+K G+ PN++ +
Sbjct: 574 KVKTAIKVLDNISAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATW 633
Query: 475 RRVLK 479
+++
Sbjct: 634 NVLVR 638
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 89/211 (42%), Gaps = 23/211 (10%)
Query: 225 QVCLNEKAFGFLPVLISS-------------KALTKKG-IWRVVEVLNQVGGSCLVSGVR 270
Q+ + ++AF + +IS K L + G + + VL+Q+ + +R
Sbjct: 431 QMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIR 490
Query: 271 ALIEMFSVL----GLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRD----LLVEM 322
E+ L E + + ERKV + + + F G LL +M
Sbjct: 491 TYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKM 550
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG-RNCHPDAITYEIFIVYSCRVGK 381
G + T+T N + CK G+ A ++L+ + + D IT+ I + C
Sbjct: 551 LVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIILWGICNWLG 610
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+ A + ++M+KRG+ P +AT ++G+F
Sbjct: 611 TEEAVVYLHEMLKRGIFPNIATWNVLVRGFF 641
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 5/209 (2%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
++I+ F + + + A+ +KK K V YNILI R C F +L EM +
Sbjct: 317 SVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEEN 376
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G +P ++Y ++ LCK+G+ +A +L +M+GR P+A Y + I SC VGK A
Sbjct: 377 GEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREA 436
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
FF++M K G+ + T+ + IKG + ++A + L + Y+ L S
Sbjct: 437 LRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISG 496
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ N + M K GL+P ++ +
Sbjct: 497 YSNAGNSQKCLELYETMKKLGLKPTINTF 525
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 81/178 (45%)
Query: 301 ILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGR 360
IL+ +C+ + ++L + + G P + YN ++ C+ G A +E+M R
Sbjct: 247 ILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESR 306
Query: 361 NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
P+ I + I C + D A + +MV +G+ P + T+ I GY +
Sbjct: 307 GLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRC 366
Query: 421 YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
++ + + + + + Y L + K+ + A+ VL +M+ G+ PN ++Y ++
Sbjct: 367 FQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLI 424
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%)
Query: 311 DFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYE 370
D K +L M++ P YN ++G LCK + DA +L EM RN P+ +T+
Sbjct: 81 DLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFN 140
Query: 371 IFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
I C+ G+ DVA +M K ++P + T + + G R E+A
Sbjct: 141 TLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEA 190
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 82/220 (37%), Gaps = 9/220 (4%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+ GSC V +R + F EM+K I T + YN LIK +C+ K ++
Sbjct: 424 IDGSCTVGKLREALRFFD-----EMSKNGIGAT---IVTYNSLIKGLCKMGKLKEAEEMF 475
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
+ G P +TYN ++ G EL E M P T+ I C
Sbjct: 476 FLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLI-SGCSK 534
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
+ FN+M++ L P + A I Y + A+ D N Y
Sbjct: 535 EGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTY 594
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
+ L H K K+++ +M GL P Y +++
Sbjct: 595 NSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQ 634
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 75/177 (42%), Gaps = 1/177 (0%)
Query: 299 YNILIKEMCRRCDFKGPR-DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
Y+I+ + + D G DL E G + T + +L LCK G+ A E+L+ +
Sbjct: 209 YSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSL 268
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
+ P + Y + C++G D A QM RGL+P + I +
Sbjct: 269 VEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMI 328
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ A ++V K + S Y++L + + +L EM +NG +PNV Y
Sbjct: 329 DKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISY 385
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 5/190 (2%)
Query: 279 LGLYE-MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYV 337
L LYE M K +K T ++ ++ LI C + K L EM Q+ P + YN +
Sbjct: 507 LELYETMKKLGLKPT---INTFHPLISG-CSKEGIKLKETLFNEMLQMNLSPDRVVYNAM 562
Query: 338 LGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
+ + G A L +EM+ PD TY I+ + GK + + M +GL
Sbjct: 563 IHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGL 622
Query: 398 QPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKN 457
P T++ I+G+ + AY + + + + + L++ K+ A++
Sbjct: 623 IPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQS 682
Query: 458 VLSEMMKNGL 467
+ SEM+ NG+
Sbjct: 683 ICSEMIANGM 692
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 112/264 (42%), Gaps = 26/264 (9%)
Query: 232 AFGFLPVLISSKALTKKGIWRVVEVLNQVGG-----SCLVSGVRALIEMFSVLGLYEMAK 286
+FG++ +++ S +KK V+++ ++ G LV G RA++ LG ++A
Sbjct: 30 SFGYVRMIVESLVESKK-FDNVLDLFKEMVGLGFRPDKLVYG-RAMLAAVK-LGDLKLAM 86
Query: 287 YVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+ + +R+ V YN+LI +C+ + L EM P +T+N ++
Sbjct: 87 ELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGY 146
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
CK G+ A L E M P IT+ + C+ + + A N++ G P
Sbjct: 147 CKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDG 206
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSS-------SNMLYSLLASLHDKNNNPVM 454
T++ G + +D + D Y+ + N S+L + K
Sbjct: 207 FTYSIIFDG---LLKSDDGAGAAL---DLYREAIGKGVKIDNYTCSILLNGLCKEGKVEK 260
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVL 478
A+ VL ++++GL P +Y ++
Sbjct: 261 AEEVLKSLVEHGLVPGEVIYNTIV 284
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 77/189 (40%), Gaps = 12/189 (6%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+LI C + EM + G +TYN ++ LCK G+ +A E+ +
Sbjct: 420 YNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLIT 479
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI-----KGYFI 413
PD ITY I G + M K GL+P + T I +G +
Sbjct: 480 STGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKL 539
Query: 414 FYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
+ + LS D+ ++Y+ + + + + A ++ EM+ G+RP+
Sbjct: 540 KETLFNEMLQMNLSPDR------VVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKT 593
Query: 474 YRR-VLKHL 481
Y +L HL
Sbjct: 594 YNSLILGHL 602
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 73/172 (42%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
MRQ G P ++ L ++ + + +L +EM+G PD + Y ++ + ++G
Sbjct: 22 MRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKLGD 81
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
+A F M +R + P + + I G R DA K + + + + ++
Sbjct: 82 LKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNT 141
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
L + K +A + M K + P++ + +L L + + A+C+
Sbjct: 142 LIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCM 193
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 48/110 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++ C+ D + +M G P + +N V+ C+ A E +++M+
Sbjct: 280 YNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMV 339
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
G+ P TY I I R+ F F +M + G +P + ++ + I
Sbjct: 340 GKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLI 389
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 82/183 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN++I MC +L MR GC P T+N ++ CK G+ +A LL+ M
Sbjct: 223 YNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMT 282
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD +TY I C + + D A + MVKR +P + T I G R +
Sbjct: 283 DDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIK 342
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + + +S + Y+ L H + A+ +LS+M+ GL PNV Y ++
Sbjct: 343 EAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALV 402
Query: 479 KHL 481
L
Sbjct: 403 SGL 405
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 5/207 (2%)
Query: 280 GLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
G+ E A +IKK V YN ++ +C+ + L EM ++GC P ++
Sbjct: 94 GMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSH 153
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N ++ LC+ + AC++ EM R+ PD+ +Y I I + GK + A+ F +M+
Sbjct: 154 NTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLD 213
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM 454
G+ P T+ I G + Y ++A + K S +++L H K
Sbjct: 214 SGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDE 273
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A +L M +G P+V Y ++ L
Sbjct: 274 AFRLLKRMTDDGHVPDVVTYSTLISGL 300
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI +C F R+L +M + GC P +TYN ++ CK G +AC+L+++M+
Sbjct: 48 YTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMI 107
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD +TY + C+ G+ + A FN+M + G P +H I G + +
Sbjct: 108 EDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKID 167
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + + + Y +L K A + M+ +G+ P+ Y V+
Sbjct: 168 QACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVI 227
Query: 479 KHL 481
+
Sbjct: 228 HGM 230
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 99/232 (42%), Gaps = 8/232 (3%)
Query: 263 SCLVSGVRALIEMFSVLGLYE-MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
S L+SG+ ++ + L E M K K T V N LI +C+ K R++L
Sbjct: 294 STLISGLCSIARVDDARHLLEDMVKRQCKPT---VVTQNTLIHGLCKAGRIKEAREVLDA 350
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M G P +TYN ++ C+ GQ A ELL +M+ R P+ +TY + C+ +
Sbjct: 351 MVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANR 410
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
A F QM G P L T+ A I G+ + + K S +++Y
Sbjct: 411 LPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGT 470
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNV---SVYRRVLKHLHTSHQEHMA 490
LA+ K+ A +L E + LR VYR + L + + MA
Sbjct: 471 LAAELCKSGRSARALEILRE-GRESLRSEAWGDEVYRFAVDGLLDAGKMEMA 521
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 60/132 (45%), Gaps = 4/132 (3%)
Query: 293 ERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
ER VS Y ILI + + RDL ++ G P T+ Y ++ LC
Sbjct: 3 ERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFD 62
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
DA EL +M R C P +TY + I SC+ G + A + +M++ G P + T+ +
Sbjct: 63 DARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVM 122
Query: 409 KGYFIFYRYEDA 420
G R E+A
Sbjct: 123 DGLCKSGRVEEA 134
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 49/116 (42%), Gaps = 6/116 (5%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI C G L EM G P + Y + LCK+G+ A A E+L E
Sbjct: 433 YTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILRE-- 490
Query: 359 GR-NCHPDAITYEIF---IVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
GR + +A E++ + GK ++A F MV+ G P A+ + G
Sbjct: 491 GRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAG 546
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M + P + +Y ++ L K G+ DA +L +++L P + Y I C
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFI 408
FD A F M +RG P T+ I
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVII 87
>gi|226499896|ref|NP_001150085.1| EMB2745 [Zea mays]
gi|195636584|gb|ACG37760.1| EMB2745 [Zea mays]
gi|414879767|tpg|DAA56898.1| TPA: EMB2745 [Zea mays]
Length = 410
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 108/235 (45%), Gaps = 5/235 (2%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEM 306
RV +V+ ++G + ALI + V G EM + + R + YN LI E
Sbjct: 59 RVFDVMPRLGVAPNEVTYTALINGYFVRGHREMGFALFAEMRRDGVEPNLYTYNCLIGEW 118
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
CR +FK R L EM G ++YN ++ LC++ + DA +L E M P
Sbjct: 119 CRTGEFKSARLLFDEMPVKGVVHNVVSYNILIAGLCRHSKLKDAVQLFEAMRREGIRPSI 178
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
+T+ + I + GK A +FFNQM GL P + T+ I G+ A + +
Sbjct: 179 VTFNLLIDGYGKAGKMANALHFFNQMKAAGLPPSVVTYNELICGFCRVRDIARAVRAFLD 238
Query: 427 SADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
++ + + + Y++L + K N A +LSEM K GL +V Y +L L
Sbjct: 239 MKERGLAPTKVTYTILIAAFAKENEMDRAFMMLSEMEKAGLEVDVQSYGVLLHAL 293
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 67/179 (37%), Gaps = 35/179 (19%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI CR D ++M++ G P +TY ++ K + A +L
Sbjct: 213 VVTYNELICGFCRVRDIARAVRAFLDMKERGLAPTKVTYTILIAAFAKENEMDRAFMMLS 272
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM D +Y + + C GK A F M +G++P
Sbjct: 273 EMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDLKGVKP---------------- 316
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+++LY ++ + + + A ++ EM KNGL PNV+ Y
Sbjct: 317 -------------------NSVLYDMMIYGYGREGSSYKALRLIMEMRKNGLIPNVASY 356
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 73/183 (39%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V+ L+ C+ D R + M ++G P +TY ++ G L
Sbjct: 38 VAACTALVHVCCQSGDVAEARRVFDVMPRLGVAPNEVTYTALINGYFVRGHREMGFALFA 97
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM P+ TY I CR G+F A F++M +G+ + ++ I G
Sbjct: 98 EMRRDGVEPNLYTYNCLIGEWCRTGEFKSARLLFDEMPVKGVVHNVVSYNILIAGLCRHS 157
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ +DA + + S + ++LL + K A + ++M GL P+V Y
Sbjct: 158 KLKDAVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAAGLPPSVVTYN 217
Query: 476 RVL 478
++
Sbjct: 218 ELI 220
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 82/183 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN++I MC +L MR GC P T+N ++ CK G+ +A LL+ M
Sbjct: 223 YNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMT 282
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD +TY I C + + D A + MVKR +P + T I G R +
Sbjct: 283 DDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIK 342
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + + +S + Y+ L H + A+ +LS+M+ GL PNV Y ++
Sbjct: 343 EAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALV 402
Query: 479 KHL 481
L
Sbjct: 403 SGL 405
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 5/207 (2%)
Query: 280 GLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
G+ E A +IKK V YN ++ +C+ + L EM ++GC P ++
Sbjct: 94 GMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSH 153
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N ++ LC+ + AC++ EM ++ PD+ +Y I I + GK + A+ F +M+
Sbjct: 154 NTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLD 213
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM 454
G+ P T+ I G + Y ++A + K S +++L H K
Sbjct: 214 SGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDE 273
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A +L M +G P+V Y ++ L
Sbjct: 274 AFRLLKRMTDDGHVPDVVTYSTLISGL 300
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 79/183 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI +C F R+L +M + GC P +TYN ++ CK G +AC+L+++M+
Sbjct: 48 YTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMI 107
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD +TY + C+ + + A FN+M + G P +H I G + +
Sbjct: 108 EDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKID 167
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + K + Y +L K A + M+ +G+ P+ Y V+
Sbjct: 168 QACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVI 227
Query: 479 KHL 481
+
Sbjct: 228 HGM 230
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 99/232 (42%), Gaps = 8/232 (3%)
Query: 263 SCLVSGVRALIEMFSVLGLYE-MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
S L+SG+ ++ + L E M K K T V N LI +C+ K R++L
Sbjct: 294 STLISGLCSIARVDDARHLLEDMVKRQCKPT---VVTQNTLIHGLCKAGRIKEAREVLDA 350
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M G P +TYN ++ C+ GQ A ELL +M+ R P+ +TY + C+ +
Sbjct: 351 MVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANR 410
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
A F QM G P L T+ A I G+ + + K S +++Y
Sbjct: 411 LPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGT 470
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNV---SVYRRVLKHLHTSHQEHMA 490
LA+ K+ A +L E + LR VYR + L + + MA
Sbjct: 471 LAAELCKSGRSARALEILRE-GRESLRSEAWGDEVYRFAVDGLLEAGKMEMA 521
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 4/132 (3%)
Query: 293 ERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
ER VS Y ILI + + R+L ++ G P T+ Y ++ LC
Sbjct: 3 ERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFD 62
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
DA EL +M R C P +TY + I SC+ G + A + +M++ G P + T+ +
Sbjct: 63 DARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVM 122
Query: 409 KGYFIFYRYEDA 420
G R E+A
Sbjct: 123 DGLCKSSRVEEA 134
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 49/116 (42%), Gaps = 6/116 (5%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI C G L EM G P + Y + LCK+G+ A A E+L E
Sbjct: 433 YTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILRE-- 490
Query: 359 GR-NCHPDAITYEIF---IVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
GR + +A E++ + GK ++A F MV+ G P A+ + G
Sbjct: 491 GRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAG 546
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 36/87 (41%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M + P + +Y ++ L K G+ DA L +++L P + Y I C
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFI 408
FD A F M +RG P T+ I
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMI 87
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 140/323 (43%), Gaps = 27/323 (8%)
Query: 177 ALCFLKYMREIMPEFYKNSDICSLVIDNC---GRLDDYETMRQLLNDFNVYQVCLNEKAF 233
A+ L+ M E E N+ +C++VI++ GR+DD + LN+ Y N
Sbjct: 301 AIQVLQQMTE--HECATNTTLCNIVINSICKQGRVDD---AFKFLNNMGSYGC--NPDTI 353
Query: 234 GFLPVLISSKALTKKGIWRVVEVL--NQVGGSCLVSGV--RALIEMFSVLGLYEMAKYVI 289
+ VL K L + W + L V +C + V I + GL E A +I
Sbjct: 354 SYTTVL---KGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLI 410
Query: 290 KKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEM-RQVGCEPITLTYNYVLGVLCK 343
++ + V YN L+ C +G D +E+ R + C+P T+TY +L LC
Sbjct: 411 EQMQEHGCTVGVVTYNALVNGFC----VQGHIDSALELFRSMPCKPNTITYTTLLTGLCN 466
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
+ A EL+ EML R+C P+ +T+ + + + C+ G D A QM++ G P L T
Sbjct: 467 AERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLIT 526
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
+ G EDA + + K S + +S + + K + A +
Sbjct: 527 YNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQ 586
Query: 464 KNGLRPNVSVYRRVLKHLHTSHQ 486
G+RP VY ++L L H+
Sbjct: 587 DIGMRPKALVYNKILLGLCKRHE 609
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 84/183 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI+ +C R LL +M + GC+P +TY +L +CKN A +L+EM
Sbjct: 145 YTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMR 204
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C P+ +TY + I CR G+ D A + N++ G QP ++ +KG R++
Sbjct: 205 AKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWD 264
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
D + +K + + + +L + A VL +M ++ N ++ V+
Sbjct: 265 DVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVI 324
Query: 479 KHL 481
+
Sbjct: 325 NSI 327
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 122/281 (43%), Gaps = 11/281 (3%)
Query: 207 RLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLV 266
R + + ++LL + NE F ++ K L ++ I ++E + + G + V
Sbjct: 364 RAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIM-LIEQMQEHGCTVGV 422
Query: 267 SGVRALIEMFSVLGLYEMAKYVIKKTERKVSY--YNILIKEMCRRCDFKGPRDLLVEMRQ 324
AL+ F V G + A + + K + Y L+ +C +L+ EM
Sbjct: 423 VTYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTGLCNAERLDAAAELVAEMLH 482
Query: 325 VGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
C P +T+N ++ C+ G +A EL+E+M+ C P+ ITY + +
Sbjct: 483 RDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSED 542
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL--- 441
A + +V +G+ P + T ++ I R E+A + L+ D ++Y+
Sbjct: 543 ALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILL 602
Query: 442 -LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
L H+ +N A + L+ M+ NG PN S Y +++ L
Sbjct: 603 GLCKRHEIDN----AIDFLAYMVSNGCMPNESTYIILIEGL 639
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 74/179 (41%), Gaps = 40/179 (22%)
Query: 282 YEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNY 336
+E A V+ + K + YN++I MCR RDLL + GC+P T++Y
Sbjct: 193 FEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTT 252
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCR------------------ 378
+L LC + + D EL EM+ +NC P+ +T+++ I + CR
Sbjct: 253 LLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHE 312
Query: 379 -----------------VGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
G+ D AF F N M G P ++ +KG R+ DA
Sbjct: 313 CATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDA 371
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 3/125 (2%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN L+ CR R L+ M P TY ++ VLC G+ ADA LL+
Sbjct: 110 VFAYNTLVAGYCRYGHLDAARRLIGSMPVA---PDAYTYTPLIRVLCDRGRVADALSLLD 166
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML R C P+ +TY + + C+ F+ A ++M +G P + T+ I G
Sbjct: 167 DMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREG 226
Query: 416 RYEDA 420
R +DA
Sbjct: 227 RVDDA 231
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+++LI+ CR + +L +M + C T N V+ +CK G+ DA + L M
Sbjct: 285 FDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMG 344
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
C+PD I+Y + CR +++ A +MV+ P T FI
Sbjct: 345 SYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFI 394
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 53/141 (37%), Gaps = 3/141 (2%)
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
LC+ G+ +DA +L G D Y + CR G D A M + P
Sbjct: 85 LCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSM---PVAPD 141
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
T+ I+ R DA + + + + Y++L KN+ A VL
Sbjct: 142 AYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLD 201
Query: 461 EMMKNGLRPNVSVYRRVLKHL 481
EM G PN+ Y ++ +
Sbjct: 202 EMRAKGCTPNIVTYNVIINGM 222
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 5/207 (2%)
Query: 280 GLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
G MA +++K E K + Y +I +C+ DLL EM G P +TY
Sbjct: 211 GNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTY 270
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
+ +L C G +A L EM+GRN P+ +T+ I + C+ G A F M K
Sbjct: 271 STILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTK 330
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM 454
+G +P T+ A + GY + + ++A K + + DK + Y++L + + K
Sbjct: 331 KGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDE 390
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVLKHL 481
AK++L EM + L P+ Y +++ L
Sbjct: 391 AKSLLVEMSEKELTPDTVTYSTLMQGL 417
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 85/185 (45%), Gaps = 2/185 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YNILI C+R + LLVEM + P T+TY+ ++ LC+ G+ +A L +
Sbjct: 372 VHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFK 431
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM PD +TY + C+ G D A M + ++P + + I+G FI
Sbjct: 432 EMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAG 491
Query: 416 RYEDAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ E A + + L AD + + Y+++ K A + +M +G PN Y
Sbjct: 492 KLEVAKELFSKLFADGIQPTIRT-YTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSY 550
Query: 475 RRVLK 479
+++
Sbjct: 551 NVIIQ 555
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 96/202 (47%), Gaps = 4/202 (1%)
Query: 281 LYEMAKYVIKKTERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNY 336
L E +++ +E++++ Y+ L++ +C+ + +L EM G P +TY+
Sbjct: 388 LDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYST 447
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
+L LCK+G +A +LL+ M PD + Y I I GK +VA F+++ G
Sbjct: 448 LLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADG 507
Query: 397 LQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAK 456
+QP + T+ IKG ++AY+ D ++ Y+++ +N + A
Sbjct: 508 IQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAI 567
Query: 457 NVLSEMMKNGLRPNVSVYRRVL 478
++ EM+ + S ++ +L
Sbjct: 568 RLIDEMVGKRFSADSSTFQMLL 589
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 99/203 (48%), Gaps = 10/203 (4%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ IL+ +C+ R + M + G EP TYN ++ C N Q +A ++L+ M+
Sbjct: 305 FTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMV 364
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C P +Y I I C+ + D A + +M ++ L P T++ ++G R +
Sbjct: 365 DKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQ 424
Query: 419 DAYKYVVLSADKYKSSSNMLYSLL--ASLHD---KNNNPVMAKNVLSEMMKNGLRPNVSV 473
+A L+ K SS +L L+ ++L D K+ + A +L M ++ + P++ +
Sbjct: 425 EA-----LNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVL 479
Query: 474 YRRVLKHLHTSHQEHMAKCLSSR 496
Y +++ + + + +AK L S+
Sbjct: 480 YNILIEGMFIAGKLEVAKELFSK 502
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 61/151 (40%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ L+ +C+ LL M++ EP + YN ++ + G+ A EL ++
Sbjct: 445 YSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLF 504
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P TY I I + G D A+ F +M G P ++ I+G+
Sbjct: 505 ADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSS 564
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKN 449
A + + K S+ + + +L L ++
Sbjct: 565 TAIRLIDEMVGKRFSADSSTFQMLLDLESRD 595
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 127/282 (45%), Gaps = 28/282 (9%)
Query: 206 GRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISS----KALTKKGIWRVVEVL--NQ 259
GR+DD R+ LN + Y GF P +S K L W VE L
Sbjct: 229 GRVDD---AREFLNRLSSY---------GFQPDTVSYTTVLKGLCAAKRWEDVEELFAEM 276
Query: 260 VGGSCLVSGVR--ALIEMFSVLGLYEMAKYVIKKTE-----RKVSYYNILIKEMCRRCDF 312
+ +C+ + V L+ F G+ E A V+++ + NI+I +C++
Sbjct: 277 MEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRV 336
Query: 313 KGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIF 372
L M GC P T++Y VL LC+ + DA ELL+EM+ +NC P+ +T+ F
Sbjct: 337 DDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTF 396
Query: 373 IVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYK 432
I C+ G + A QM + G + + T+ A + G+ + R + A + + + K
Sbjct: 397 ICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALE--LFYSMPCK 454
Query: 433 SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
++ +LL L + A+ +L+EM++ PNV +
Sbjct: 455 PNTITYTTLLTGLCNAERLDAAAE-LLAEMLQKDCAPNVVTF 495
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 97/224 (43%), Gaps = 2/224 (0%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKK--TERKVSYYNILIKEMCRR 309
RV+ + G + V L+ + G + A+ +I Y +I+ +C R
Sbjct: 99 RVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDR 158
Query: 310 CDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITY 369
LL +M GC+P +TY +L +CK+ A E+L+EM + C P+ +TY
Sbjct: 159 GRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTY 218
Query: 370 EIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSAD 429
+ I CR G+ D A F N++ G QP ++ +KG R+ED + +
Sbjct: 219 NVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMME 278
Query: 430 KYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
K + + + +L + A VL +M +G N ++
Sbjct: 279 KNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTL 322
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 127/300 (42%), Gaps = 23/300 (7%)
Query: 194 NSDICSLVIDNC---GRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGI 250
N+ +C++VI+ GR+DD Q LN+ Y + + VL K L +
Sbjct: 319 NTTLCNIVINTICKQGRVDD---AFQFLNNMGSYGC--SPDTISYTTVL---KGLCRAER 370
Query: 251 WRVVEVL--NQVGGSCLVSGV--RALIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNI 301
W + L V +C + V I + GL E A +I++ E + YN
Sbjct: 371 WEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNA 430
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
L+ C + +L M C+P T+TY +L LC + A ELL EML ++
Sbjct: 431 LVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKD 487
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
C P+ +T+ + + + C+ G D A QM++ G P L T+ + G E+A
Sbjct: 488 CAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEAL 547
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + S + YS + + + + A + + G+RP +Y ++L L
Sbjct: 548 ELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLAL 607
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 117/277 (42%), Gaps = 3/277 (1%)
Query: 207 RLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLV 266
R + +E ++LL + NE F ++ K L ++ ++E +++ G +
Sbjct: 367 RAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATM-LIEQMSEHGCEVNI 425
Query: 267 SGVRALIEMFSVLGLYEMAKYVIKKTERKVSY--YNILIKEMCRRCDFKGPRDLLVEMRQ 324
AL+ F V G + A + K + Y L+ +C +LL EM Q
Sbjct: 426 VTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQ 485
Query: 325 VGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
C P +T+N ++ C+ G +A EL+E+M+ C P+ ITY + +
Sbjct: 486 KDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEE 545
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLAS 444
A + +V G+ P + T+++ I R E+A K + D ++Y+ +
Sbjct: 546 ALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILL 605
Query: 445 LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K N A + + M+ NG PN Y +++ L
Sbjct: 606 ALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGL 642
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 60/159 (37%), Gaps = 3/159 (1%)
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
LC+ G+ +DA +L D Y + CR G+ D A M + P
Sbjct: 88 LCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPD 144
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
T+ I+G R +A + + S + Y++L K+ A VL
Sbjct: 145 AYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLD 204
Query: 461 EMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSS 499
EM G PN+ Y ++ + + A+ +R SS
Sbjct: 205 EMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSS 243
>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 2/205 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ILI +C + L +M + GC+P T TY ++ LC G A L +EM+
Sbjct: 269 YSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMI 328
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R C P+ TY + I CR GK + A +MVK G+ P + T+ A I GY R
Sbjct: 329 ARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVV 388
Query: 419 DAYKYV-VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
A++ + V+ K + L+ L + P A ++L M+ NGL P++ Y +
Sbjct: 389 PAFELLTVMEKRACKPNVRTFNELMEGLC-RVGKPYKAVHLLKRMLDNGLSPDIVSYNVL 447
Query: 478 LKHLHTSHQEHMAKCLSSRYSSLSL 502
+ L ++A L + +S L
Sbjct: 448 IDGLCREGHMNVAYKLLTSMNSFDL 472
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 78/159 (49%)
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
R+ C P +++Y+ ++ LC+ G+ +A L ++M + C P TY + I C G
Sbjct: 258 REGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLI 317
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
D AFN F++M+ RG +P + T+ I G + E+A S + Y+ L
Sbjct: 318 DKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNAL 377
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + K+ V A +L+ M K +PNV + +++ L
Sbjct: 378 INGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGL 416
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 2/173 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y +LI +CR + + +M + G P +TYN ++ CK+G+ A ELL
Sbjct: 336 VHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLT 395
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M R C P+ T+ + CRVGK A + +M+ GL P + ++ I G
Sbjct: 396 VMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREG 455
Query: 416 RYEDAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
AYK ++ S + + + L ++ + + K +A L M++ G+
Sbjct: 456 HMNVAYK-LLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGI 507
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 92/199 (46%), Gaps = 9/199 (4%)
Query: 245 LTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYE-MAKYVIKKTERKVSYYNILI 303
+ +KGI L++V G+ L+ GV + + L + E + K + T + N+++
Sbjct: 502 MLRKGIS-----LDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSL---NVIL 553
Query: 304 KEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH 363
+ + C K +L ++ ++G P +TY ++ L ++G + + +LE M C
Sbjct: 554 DMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCL 613
Query: 364 PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY 423
P+ Y I I C+ G+ + A + M G+ P T+ +KGY + + A +
Sbjct: 614 PNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALET 673
Query: 424 VVLSADKYKSSSNMLYSLL 442
V ++ ++ +YS L
Sbjct: 674 VRAMVERGYELNDRIYSSL 692
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y L+ + R D G +L M+ GC P Y ++ LC+ G+ +A +LL
Sbjct: 581 VVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLS 640
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
M P+ +TY + + GK D A MV+RG + +++ ++G+ +
Sbjct: 641 AMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVL 698
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 88/186 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN++I +C+ D + R L V+MR++G P +TYN ++ K G + L
Sbjct: 289 VFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFN 348
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM C PD ITY I C+ K AF +F++M GL+P + T++ I +
Sbjct: 349 EMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEG 408
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ A K V + Y+ L + K N A +L++M++ G++ N+ Y
Sbjct: 409 MMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYT 468
Query: 476 RVLKHL 481
+L L
Sbjct: 469 ALLDGL 474
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 74/175 (42%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ LI C+ +G L V+MR+ G P TY ++ CK G +A +LL
Sbjct: 394 VVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLN 453
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML + +TY + C+ G+ A F M+K G+ P + A + GY
Sbjct: 454 DMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAE 513
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
R EDA K + + +LY + H K +L EM G+ N
Sbjct: 514 RMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISAN 568
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 88/221 (39%), Gaps = 8/221 (3%)
Query: 266 VSGVRALIEMFSV---LGLYEMAKYVIKK-----TERKVSYYNILIKEMCRRCDFKGPRD 317
VSG +FSV LGL E A + T K N L+ + + + + R
Sbjct: 216 VSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRK 275
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
+M G P TYN ++ LCK G ++ L +M PD +TY I
Sbjct: 276 FFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYG 335
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+VG + + FN+M G P + T+ I Y F + A++Y + + +
Sbjct: 336 KVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVV 395
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
YS L K A + +M + GL PN Y ++
Sbjct: 396 TYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLI 436
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 81/206 (39%), Gaps = 39/206 (18%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +I C + + + +L EM+ G + ++ K G+ +DA +EM
Sbjct: 537 YGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQ 596
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+TY + I C+ G ++A ++F +M+ GLQP +A + + I G
Sbjct: 597 DVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLC------ 650
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
KNN AK + EM G+ P+++ + ++
Sbjct: 651 -----------------------------KNNCIESAKKLFDEMQCRGMTPDITAFTALI 681
Query: 479 KH--LHTSHQEHMAKCLSSRYSSLSL 502
H + QE A L SR + L++
Sbjct: 682 DGNLKHGNLQE--ALVLISRMTELAI 705
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 71/183 (38%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ +C+ ++ M + G P Y ++ K + DA ++L++M
Sbjct: 467 YTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMT 526
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
N PD I Y I C K + +M RG+ I YF +
Sbjct: 527 ECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSS 586
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA + D ++ + Y +L K +A + M+ GL+PNV+VY ++
Sbjct: 587 DALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLI 646
Query: 479 KHL 481
L
Sbjct: 647 DGL 649
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 60/149 (40%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
EM+ VG E +TY ++ LCK G A + ML P+ Y I C+
Sbjct: 594 EMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNN 653
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+ A F++M RG+ P + A I G ++A + + +Y+
Sbjct: 654 CIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYT 713
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
L S + A+ +EM++ G+ P
Sbjct: 714 SLVSGFSQCGELHQARKFFNEMIEKGILP 742
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 50/120 (41%)
Query: 292 TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADAC 351
E + Y +LI +C+ + D M +G +P Y ++ LCKN A
Sbjct: 600 VEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAK 659
Query: 352 ELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
+L +EM R PD + I + + G A ++M + ++ L + + + G+
Sbjct: 660 KLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGF 719
>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 772
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN+ + +C++ +F+ DLL M G P +TY ++ KNG A E+
Sbjct: 495 VITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFN 554
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EML + P +TY + I D+AF +F++M+++ + + T+ A I G +
Sbjct: 555 EMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTR 614
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R ++AYKY +K + Y++L + A + EM+ ++P+ +
Sbjct: 615 RMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHS 674
Query: 476 RVLKHLHTSHQEHMAKCLSS 495
LK+LH +Q H +C+ S
Sbjct: 675 VFLKNLHRDYQVHAVQCVES 694
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 120/250 (48%), Gaps = 15/250 (6%)
Query: 167 LRVLNSEKVSALCFLKYMREIM--PEFYKNS----DICSLVIDNCGRLDDYETMRQLLND 220
+RVL+S ++ L++ R +M P+F ++ I +++ N Y M ++++
Sbjct: 89 IRVLHSMRIRPRVALRFFRWVMAQPDFKESEFVFCAILDILVGNDLMHAAYWVMERVVS- 147
Query: 221 FNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLG 280
F ++ V ++ G + L+ + + G+ V+ N++ ++ L + +V G
Sbjct: 148 FEMHGV-VDVLIAGHVXCLLVFDKMIRNGLLPDVKNCNRILR--VLRDENLLSKAKNVYG 204
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
+ M ++ IK T V YN ++ C+ +LL EM++ GC P +TYN ++
Sbjct: 205 M--MEQFGIKPT---VVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNG 259
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
L K G+ A L+EEML + A TY I C+ G F AF+ +MV R P
Sbjct: 260 LSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPT 319
Query: 401 LATHAAFIKG 410
L+T+ + G
Sbjct: 320 LSTYNTLMYG 329
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 78/191 (40%), Gaps = 1/191 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI +C L EM G P TY ++ K G + A
Sbjct: 390 VITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFN 449
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EML + PD Y IV ++ VAF+ +M+ G P + T+ F+
Sbjct: 450 EMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQG 509
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+E+A + ++ Y+ + + KN + A+ V +EM+ G+ P+V Y
Sbjct: 510 NFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTY- 568
Query: 476 RVLKHLHTSHQ 486
VL H H + Q
Sbjct: 569 TVLIHAHAAKQ 579
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M Q G +P +TYN +L CK G+ A ELL EM R C+P+ +TY + + + G+
Sbjct: 206 MEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGE 265
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
+ A +M+ GL T+ I G+
Sbjct: 266 LEQAKGLIEEMLNSGLNVSAYTYNPLINGF 295
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 84/208 (40%), Gaps = 5/208 (2%)
Query: 272 LIEMFSVLGLYEMA-----KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI F GL+ A + V ++ +S YN L+ +C+ G R +M +
Sbjct: 291 LINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSK 350
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
P +++N +L C+ G ++A L +E+ R+ P ITY I C G D A
Sbjct: 351 FTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAAL 410
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
+M +GL P + T+ + G F A + K Y+
Sbjct: 411 RLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGE 470
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
K + +A ++ EM+ G P+V Y
Sbjct: 471 MKIADTSVAFSMQEEMLAAGFPPDVITY 498
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 135/301 (44%), Gaps = 25/301 (8%)
Query: 194 NSDICSLVIDNC---GRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGI 250
N+ +C++VI++ GR+DD +LLND Y N + VL K L +
Sbjct: 317 NTTLCNIVINSICKQGRVDD---AFKLLNDMGSYGC--NPDTISYTTVL---KGLCRAER 368
Query: 251 WR-VVEVLNQ-VGGSCLVSGV--RALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNI 301
W E+LN+ V +C + V I + GL E A +I++ V YN
Sbjct: 369 WDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNA 428
Query: 302 LIKEMCRRCDFKGPRDLLVEM-RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGR 360
L+ C +G D +E+ R + C+P T+TY +L LC + A EL+ EML
Sbjct: 429 LVNGFC----VQGHIDSALELFRSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRG 484
Query: 361 NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
+C P+ +T+ + + + C+ G + A QM++ G P L T+ + G EDA
Sbjct: 485 DCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDA 544
Query: 421 YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKH 480
+ + K S + +S + + K + A + + G+RP VY ++L
Sbjct: 545 LELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLG 604
Query: 481 L 481
L
Sbjct: 605 L 605
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 128/282 (45%), Gaps = 28/282 (9%)
Query: 206 GRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISS----KALTKKGIWRVVEVL--NQ 259
GR+DD R+LLN ++GF P +S K L W VE L
Sbjct: 227 GRVDD---ARELLNRL---------PSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEM 274
Query: 260 VGGSCLVSGVR--ALIEMFSVLGLYEMAKYVIKK-TER----KVSYYNILIKEMCRRCDF 312
+ +C+ + V LI F G+ E A V+++ TE + NI+I +C++
Sbjct: 275 MEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRV 334
Query: 313 KGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIF 372
LL +M GC P T++Y VL LC+ + DA ELL EM+ NC P+ +T+ F
Sbjct: 335 DDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTF 394
Query: 373 IVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYK 432
I C+ G + A QM + G + T+ A + G+ + + A + + + K
Sbjct: 395 ICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALE--LFRSMPCK 452
Query: 433 SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
++ +LL L + A+ +++EM++ PNV +
Sbjct: 453 PNTITYTTLLTGLCNAERLDGAAE-LVAEMLRGDCPPNVVTF 493
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 84/183 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI+ +C R LL +M + GC+P +TY +L +C+N A +L+EM
Sbjct: 146 YTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMR 205
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C P+ +TY + I CR G+ D A N++ G QP ++ +KG R++
Sbjct: 206 AKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWD 265
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
D + +K + + + +L + A VL +M ++G N ++ V+
Sbjct: 266 DVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVI 325
Query: 479 KHL 481
+
Sbjct: 326 NSI 328
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 7/187 (3%)
Query: 295 KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
V YN L+ CR R L+ M P TY ++ VLC G+ ADA LL
Sbjct: 110 DVFAYNTLVAGYCRYGHLDAARRLIGSMPVA---PDAYTYTPLIRVLCDRGRVADALSLL 166
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
++ML R C P+ +TY + + CR F+ A ++M +G P + T+ I G
Sbjct: 167 DDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCRE 226
Query: 415 YRYEDAYKYV-VLSADKYKSSSNMLYSLLASL-HDKNNNPVMAKNVLSEMMKNGLRPNVS 472
R +DA + + L + ++ + +LL L K + V + + +EMM+ PN
Sbjct: 227 GRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDV--EELFAEMMEKNCMPNEV 284
Query: 473 VYRRVLK 479
+ +++
Sbjct: 285 TFDMLIR 291
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 54/112 (48%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ + + C + +LL + G P +T++ ++G+L K + +A +L +
Sbjct: 528 YNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQ 587
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
P A+ Y ++ C+ + D A +FF MV G P +T+ I+G
Sbjct: 588 DIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEG 639
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 60/159 (37%), Gaps = 3/159 (1%)
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
LC+ G+ +DA +L G D Y + CR G D A M + P
Sbjct: 86 LCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSM---PVAPD 142
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
T+ I+ R DA + + + + Y++L +N+ A VL
Sbjct: 143 AYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLD 202
Query: 461 EMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSS 499
EM G PN+ Y ++ + + A+ L +R S
Sbjct: 203 EMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPS 241
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 127/282 (45%), Gaps = 28/282 (9%)
Query: 206 GRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISS----KALTKKGIWRVVEVL--NQ 259
GR+DD R+ LN + Y GF P +S K L W VE L
Sbjct: 229 GRVDD---AREFLNRLSSY---------GFQPDTVSYTTVLKGLCAAKRWEDVEELFAEM 276
Query: 260 VGGSCLVSGVR--ALIEMFSVLGLYEMAKYVIKKTE-----RKVSYYNILIKEMCRRCDF 312
+ +C+ + V L+ F G+ E A V+++ + NI+I +C++
Sbjct: 277 MEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRV 336
Query: 313 KGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIF 372
L M GC P T++Y VL LC+ + DA ELL+EM+ +NC P+ +T+ F
Sbjct: 337 DDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTF 396
Query: 373 IVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYK 432
I C+ G + A QM + G + + T+ A + G+ + R + A + + + K
Sbjct: 397 ICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALE--LFYSMPCK 454
Query: 433 SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
++ +LL L + A+ +L+EM++ PNV +
Sbjct: 455 PNTITYTTLLTGLCNAERLDAAAE-LLAEMLQKDCAPNVVTF 495
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 97/224 (43%), Gaps = 2/224 (0%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKK--TERKVSYYNILIKEMCRR 309
RV+ + G + V L+ + G + A+ +I Y +I+ +C R
Sbjct: 99 RVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDR 158
Query: 310 CDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITY 369
LL +M GC+P +TY +L +CK+ A E+L+EM + C P+ +TY
Sbjct: 159 GRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTY 218
Query: 370 EIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSAD 429
+ I CR G+ D A F N++ G QP ++ +KG R+ED + +
Sbjct: 219 NVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMME 278
Query: 430 KYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
K + + + +L + A VL +M +G N ++
Sbjct: 279 KNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTL 322
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 127/300 (42%), Gaps = 23/300 (7%)
Query: 194 NSDICSLVIDNC---GRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGI 250
N+ +C++VI+ GR+DD Q LN+ Y + + VL K L +
Sbjct: 319 NTTLCNIVINTICKQGRVDD---AFQFLNNMGSYGC--SPDTISYTTVL---KGLCRAER 370
Query: 251 WRVVEVL--NQVGGSCLVSGV--RALIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNI 301
W + L V +C + V I + GL E A +I++ E + YN
Sbjct: 371 WEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNA 430
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
L+ C + +L M C+P T+TY +L LC + A ELL EML ++
Sbjct: 431 LVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKD 487
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
C P+ +T+ + + + C+ G D A QM++ G P L T+ + G E+A
Sbjct: 488 CAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEAL 547
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + S + YS + + + + A + + G+RP +Y ++L L
Sbjct: 548 ELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLAL 607
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 118/277 (42%), Gaps = 3/277 (1%)
Query: 207 RLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLV 266
R + +E ++LL + NE F ++ K L ++ ++E +++ G +
Sbjct: 367 RAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATM-LIEQMSEHGCEVNI 425
Query: 267 SGVRALIEMFSVLGLYEMAKYVIKKTERKVSY--YNILIKEMCRRCDFKGPRDLLVEMRQ 324
AL+ F V G + A + K + Y L+ +C +LL EM Q
Sbjct: 426 VTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQ 485
Query: 325 VGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
C P +T+N ++ C+ G +A EL+E+M+ C P+ ITY + + +
Sbjct: 486 KDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEE 545
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLAS 444
A + +V G+ P + T+++ I R E+A K + D ++Y+ +
Sbjct: 546 ALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILL 605
Query: 445 LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K N A + + M+ NG PN Y +++ L
Sbjct: 606 ALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGL 642
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 60/159 (37%), Gaps = 3/159 (1%)
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
LC+ G+ +DA +L D Y + CR G+ D A M + P
Sbjct: 88 LCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPD 144
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
T+ I+G R +A + + S + Y++L K+ A VL
Sbjct: 145 AYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLD 204
Query: 461 EMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSS 499
EM G PN+ Y ++ + + A+ +R SS
Sbjct: 205 EMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSS 243
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 91/186 (48%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
+ V YN ++K +C + +DL+ EM +VGC P +T+N ++G LC+NG +
Sbjct: 222 DPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQ 281
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+L +M+ C PD Y + C+ G +VA ++M GL+P + + +KG
Sbjct: 282 VLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLC 341
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
R+E A + + D ++ +++L +N +L +M+++G P+V
Sbjct: 342 SAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVI 401
Query: 473 VYRRVL 478
Y V+
Sbjct: 402 TYTTVI 407
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 118/281 (41%), Gaps = 12/281 (4%)
Query: 211 YETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGV- 269
+E +LL + L++ F L L ++RV+E+L Q+ V V
Sbjct: 346 WEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGL----VYRVIELLEQMLEHGCVPDVI 401
Query: 270 --RALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEM 322
+I F GL + A ++K Y I++K +C + DL+ +M
Sbjct: 402 TYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQM 461
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
+ GC P +T+N V+ LCK G A ELL++ML C PD I+Y I + GK
Sbjct: 462 IEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKT 521
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
D A N MV +G+ P +++ R + D S +LY+ +
Sbjct: 522 DEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAV 581
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHT 483
S K A L+ M+ +G PN S Y +++ L +
Sbjct: 582 ISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLAS 622
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 3/210 (1%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L M Y +K V YN ++K +C ++ +LL EM C +T+N ++
Sbjct: 318 LDRMPSYGLKP---NVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDF 374
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
C+NG ELLE+ML C PD ITY I C+ G D A M G +P
Sbjct: 375 FCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPN 434
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
++ +KG R+ DA + ++ S + + ++ + + K A +L
Sbjct: 435 TISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLK 494
Query: 461 EMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
+M+ NG P++ Y V+ L + + A
Sbjct: 495 QMLLNGCSPDLISYSTVIDGLGKAGKTDEA 524
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 127/301 (42%), Gaps = 28/301 (9%)
Query: 198 CSLVI----DNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTK-----K 248
C+LV+ D G +D E +R LL D +FG P ++S A+ K K
Sbjct: 191 CNLVLNAVCDQGGSVD--EALR-LLRDL--------PTSFGCDPDVVSYNAVLKGLCMAK 239
Query: 249 GIWRVVEVLNQ---VGGSCLVSGVRALIEMFSVLGLYE-----MAKYVIKKTERKVSYYN 300
RV +++ + VG V LI GL+E +A+ V + Y
Sbjct: 240 RWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYA 299
Query: 301 ILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGR 360
++ +C+ + ++L M G +P + YN VL LC + A ELL EM
Sbjct: 300 TVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDN 359
Query: 361 NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
+C D +T+ I + + C+ G QM++ G P + T+ I G+ ++A
Sbjct: 360 DCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEA 419
Query: 421 YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKH 480
+ A + + Y+++ V A++++S+M++ G PN + V+
Sbjct: 420 VMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINF 479
Query: 481 L 481
L
Sbjct: 480 L 480
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 66/166 (39%), Gaps = 35/166 (21%)
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
GC+P ++YN VL LC + +L+EEM+ C P+ +T+ I Y CR G F+
Sbjct: 220 GCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERV 279
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
QMV G P + +A + G
Sbjct: 280 HQVLAQMVDHGCTPDIRMYATVLDGVC--------------------------------- 306
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
K + +A +L M GL+PNV Y VLK L ++ + A+
Sbjct: 307 --KEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAE 350
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 86/238 (36%), Gaps = 57/238 (23%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++ CR R L V P TY V+ LC G+ ADA +L+EM
Sbjct: 86 YNAMVSGYCRAGQLASARRLAA---SVPVPPNAYTYFPVVRALCARGRIADALSVLDEMR 142
Query: 359 GRNCHPDAITYEIFIVYSC------------RV--------------------------- 379
R C P Y + + +C RV
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202
Query: 380 GKFDVAFNFFNQM-VKRGLQPRLATHAAFIKGYFIFYRY---EDAYKYVVLSADKYKSSS 435
G D A + G P + ++ A +KG + R+ +D + +V +
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMV----RVGCPP 258
Query: 436 NML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK------HLHTSHQ 486
N++ ++ L +N VL++M+ +G P++ +Y VL HL +H+
Sbjct: 259 NVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHE 316
>gi|294460219|gb|ADE75692.1| unknown [Picea sitchensis]
Length = 433
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 157/380 (41%), Gaps = 17/380 (4%)
Query: 95 FSNCNGSCRSQISKLGLLTSRCISSFAMVNGPYATPKQVSEIIELLRSGDSETESKLLSM 154
F + N + R + L + A+ + EI ++L GD + E L +
Sbjct: 63 FYSTNVALREDKDEEDTLPELSKTDEALEKNKWELVDAAREICQVLEKGDEDMEEALSQL 122
Query: 155 SVSLSNASVIEILRVLNSEKVSALCFLKYMREIMPEFYKNSDICSLVIDNCGRLDDYETM 214
V L+ ++ I+ S AL F ++ + + P F + +++ GR D+E +
Sbjct: 123 GVHLT-PQLVNIVFDKISVPSLALRFFQWAK-LQPGFKHATSNYDRLVNILGRSKDFEAL 180
Query: 215 RQLLNDFNVYQVCLN--EKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRAL 272
+++L + VC N K F F + + V+E+L ++ S L
Sbjct: 181 QRVL--LEISAVCCNYSAKTFSFATAWHDDPDMLNE----VMEMLEKLELSLRRDAYEML 234
Query: 273 IEMFSVLGLYEMAKYVIKKT-----ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGC 327
I + A V++K ++ Y LI+ + +++ ++
Sbjct: 235 ISVLCQKNHANAALMVLEKMGSRDCAPRMQSYRPLIQLYSQNNRMDKVQEIFDMLKDCPG 294
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
+PI Y+ VL LC Q A+A E ++ M+ PDAITY I I +C +GK A
Sbjct: 295 DPIC--YHIVLSALCNKKQFAEAVEFVKRMVNMGWKPDAITYNIMIRAACNLGKIQGALK 352
Query: 388 FFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHD 447
F++ + GL P T+ + G F ++ A+ +++ + K + + Y L L
Sbjct: 353 LFDRSKEEGLTPLYHTYVNILDGLFRIRGFDGAHSFLIQHSGKDRKLDSTNYIHLIKLSS 412
Query: 448 KNNNPVMAKNVLSEMMKNGL 467
K+ A+N+ EM G
Sbjct: 413 KSGQEQGARNLRKEMKAKGF 432
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 88/186 (47%), Gaps = 1/186 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
VSY N LI +C + MR+ GC P TY ++ LC++G++ +A L
Sbjct: 256 VSYTN-LIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFG 314
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM R C P+ TY + I Y C+ G+ D A N+MV++G+ P + A I Y
Sbjct: 315 EMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRG 374
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
EDA + L K + Y+ L + + A +L++M+++ L P+V Y
Sbjct: 375 MMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYN 434
Query: 476 RVLKHL 481
++ L
Sbjct: 435 TLIHGL 440
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 83/183 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI C+ + L M C P ++T+N ++ L K G+ DA L+E+M
Sbjct: 503 YTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMA 562
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P TY I + + FD A N+++ G QP + T+ AFIK Y R E
Sbjct: 563 KFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLE 622
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + V+ ++ + +Y+LL + + A VL M G P+ Y ++
Sbjct: 623 EAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILM 682
Query: 479 KHL 481
KHL
Sbjct: 683 KHL 685
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 71/167 (42%), Gaps = 7/167 (4%)
Query: 245 LTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIK 304
+ +KG+ V N + GS G+ + + VLGL E KK V YN LI
Sbjct: 351 MVEKGVAPSVVPFNALIGSYCKRGM--MEDAVGVLGLMES-----KKVCPNVRTYNELIC 403
Query: 305 EMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHP 364
CR LL +M + P +TYN ++ LC+ G A L M+ P
Sbjct: 404 GFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSP 463
Query: 365 DAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
D T+ F+V CR+G+ A + ++ ++ + A I GY
Sbjct: 464 DQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGY 510
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 92/223 (41%), Gaps = 37/223 (16%)
Query: 206 GRLDDYETM------RQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQ 259
GRL++ E M +L D +Y + +N A+G + +L S+ + ++
Sbjct: 619 GRLEEAEEMVIKIKNEGVLLDSFIYNLLIN--AYGCMGLLDSAFGVLRR----------M 666
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK--------VSYYNILIK--EMCRR 309
G C S + +S+L M VI+K +++ VS NI + ++ +
Sbjct: 667 FGTGCEPSYL-----TYSIL----MKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSK 717
Query: 310 CDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITY 369
DF L +M + GC P TY+ ++ LCK G+ A L M P I +
Sbjct: 718 IDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIH 777
Query: 370 EIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+ C++G F A + M++ L ++ I G F
Sbjct: 778 NSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLF 820
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 76/212 (35%), Gaps = 35/212 (16%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL--CKNGQDADACELLEEM 357
N ++ C+ + R V R + CEP + Y VL C+N AC + M
Sbjct: 193 NTMLNSYCKLGNMAVARLFFV--RILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVM 250
Query: 358 LGRN-------------------------------CHPDAITYEIFIVYSCRVGKFDVAF 386
RN C P TY + + C G+ A
Sbjct: 251 PRRNAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEAL 310
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
+ F +M +RG +P + T+ I R ++A K + +K + S + ++ L +
Sbjct: 311 SLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSY 370
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
K A VL M + PNV Y ++
Sbjct: 371 CKRGMMEDAVGVLGLMESKKVCPNVRTYNELI 402
>gi|356555026|ref|XP_003545840.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Glycine max]
Length = 587
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 136/326 (41%), Gaps = 22/326 (6%)
Query: 166 ILRVLNSEKVSALCFLKYMREIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQ 225
+L L + V+ + + Y R + N I + + C + D E QLLN+ +V
Sbjct: 167 LLNSLLKDGVTHMVWKIYKRMVQVGVVPNIYIYNCLFHACSKSGDVERAEQLLNEMDVKG 226
Query: 226 VCLNEKAFGFLPVLISSKAL-----------TKKGI-WRVVEVLNQVGGSCLVSGVRALI 273
V + + L L K + ++GI +V + + G C +R +
Sbjct: 227 VLQDIFTYNTLLSLYCKKGMHYEALSIQNRMEREGINLDIVSYNSLIYGFCKEGRMREAM 286
Query: 274 EMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLT 333
MFS IK Y LI C+ + + + M G P +T
Sbjct: 287 RMFSE----------IKNATPNHVTYTTLIDGYCKTNELEEALKMCKLMEAKGLYPGVVT 336
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
YN +L LC++G+ DA +LL EM R D IT I C++G A F N+M+
Sbjct: 337 YNSILRKLCQDGRIRDANKLLNEMSERKLQADNITCNTLINAYCKIGDLKSALKFKNKML 396
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPV 453
+ GL+P T+ A I G+ E A + + D + S YS + ++K +N
Sbjct: 397 EAGLKPDPFTYKALIHGFCKTNELESAKELMFSMLDAGFTPSYCTYSWIVDGYNKKDNMD 456
Query: 454 MAKNVLSEMMKNGLRPNVSVYRRVLK 479
+ E + G+ +VSVYR +++
Sbjct: 457 AVLALPDEFLSRGICLDVSVYRALIR 482
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 77/188 (40%), Gaps = 4/188 (2%)
Query: 292 TERKVSYYNI----LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQD 347
+ERK+ NI LI C+ D K +M + G +P TY ++ CK +
Sbjct: 361 SERKLQADNITCNTLINAYCKIGDLKSALKFKNKMLEAGLKPDPFTYKALIHGFCKTNEL 420
Query: 348 ADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAF 407
A EL+ ML P TY + + D ++ + RG+ ++ + A
Sbjct: 421 ESAKELMFSMLDAGFTPSYCTYSWIVDGYNKKDNMDAVLALPDEFLSRGICLDVSVYRAL 480
Query: 408 IKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
I+ R + A + K S +++Y+ +A + N A ++L EM + L
Sbjct: 481 IRSSCKVERIQCAERLFYHMEGKGISGESVIYTSIAYAYWNVGNVSAASSMLEEMARRRL 540
Query: 468 RPNVSVYR 475
V +YR
Sbjct: 541 MITVKLYR 548
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 5/216 (2%)
Query: 271 ALIEMFSVLGLYEMAKYVIKK-----TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
AL+ S +G ++++ K +R V YNI+I +C+ D + R L +M++
Sbjct: 26 ALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEA 85
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P +TYN ++ K G + + E+M +C PD ITY I C+ + A
Sbjct: 86 GFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKA 145
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
F F ++M GL+P + T++ FI + ++A K+ V + + Y+ L
Sbjct: 146 FEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDA 205
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ K N A ++ E+++ G++ NV Y +L L
Sbjct: 206 NCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGL 241
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 79/191 (41%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ I C+ + V+MR+V P TY ++ CK G A+A +L+E
Sbjct: 161 VVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVE 220
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
E+L + +TY + C G+ A F M+ G+ P T+ A + G+
Sbjct: 221 EILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAK 280
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A + +K +LY + + AK ++ E+ ++G+ N +Y
Sbjct: 281 EMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYT 340
Query: 476 RVLKHLHTSHQ 486
++ S Q
Sbjct: 341 TLMDAYFKSGQ 351
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 50/107 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI + + + +L M ++G E Y ++ L +GQ A LL+EM+
Sbjct: 397 YTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMI 456
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
G+ PD + Y I +GK D A N+M KRG+ L+ HA
Sbjct: 457 GKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMITGLSDHA 503
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 89/214 (41%), Gaps = 17/214 (7%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
AL+ F E AK ++K+ + K + Y ++ +C + + L+ E+++
Sbjct: 271 ALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKES 330
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G + Y ++ K+GQ +A LLEEML + C+ F+VA
Sbjct: 331 GINTNAVIYTTLMDAYFKSGQATEALTLLEEMLD------------LVDGLCKNNCFEVA 378
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
F++M+ +G+ P + A I G ++A + Y+ L
Sbjct: 379 KKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWG 438
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
+ A+N+L EM+ G+ P+ VY ++K
Sbjct: 439 LSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIK 472
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 65/156 (41%)
Query: 319 LVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCR 378
++MR+ P + N +L L K G+ + + ++M TY I I Y C+
Sbjct: 9 FLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCK 68
Query: 379 VGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML 438
G ++A + F QM + G P + T+ + I G+ ++ D +
Sbjct: 69 EGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVIT 128
Query: 439 YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
Y+ L + K A L EM NGL+PNV Y
Sbjct: 129 YNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTY 164
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 82/203 (40%), Gaps = 23/203 (11%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI C+ + L+ E+ Q G + +TY +L LC+ G+ +A E+ ML
Sbjct: 199 YTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAML 258
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ TY + + + + A + +M ++ ++P L + + G R E
Sbjct: 259 NAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLE 318
Query: 419 D----------------AYKYVVLSADKYKSS-SNMLYSLLASLHD------KNNNPVMA 455
+ A Y L +KS + +LL + D KNN +A
Sbjct: 319 EAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVA 378
Query: 456 KNVLSEMMKNGLRPNVSVYRRVL 478
K + EM+ G+ P+ Y ++
Sbjct: 379 KKLFDEMLDKGMMPDKIAYTALI 401
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 50/119 (42%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
L+ +C+ F+ + L EM G P + Y ++ K+G +A L + M+
Sbjct: 365 LVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIG 424
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
D Y I G+ A N ++M+ +G+ P + IK Y+ + ++A
Sbjct: 425 MELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEA 483
>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 443
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 100/232 (43%), Gaps = 5/232 (2%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEM 306
R++E++ G V LI G + A+ ++ R+ V +NILI +
Sbjct: 140 RIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFL 199
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
CR+ D+L +M + GC P +L+YN +L CK + A E L +M R C+PD
Sbjct: 200 CRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDI 259
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
+TY + C+ GK D A NQ+ +G P L T+ I G + + A K +
Sbjct: 260 VTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDE 319
Query: 427 SADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
K + YS L + A ++ G++PN Y ++
Sbjct: 320 MRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIM 371
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 4/161 (2%)
Query: 286 KYVIKKTER----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+Y+ K T R + YN L+ +C+ +LL ++ GC P+ +TYN V+ L
Sbjct: 245 EYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGL 304
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
K G+ A +LL+EM + PD ITY + R GK D A FF+ + G++P
Sbjct: 305 SKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNA 364
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
T+ A + G + + A ++ + + Y++L
Sbjct: 365 ITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTIL 405
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 87/215 (40%), Gaps = 35/215 (16%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
LI+ C+ + ++ + G P +TYN ++ +C G+ DA +LL +M+ R
Sbjct: 125 LIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRG 184
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
C P +T+ I I + CR G A + +M K G P ++ + G+ + E A
Sbjct: 185 CSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAI 244
Query: 422 KYV-----------------VLSADKYKSSSNMLYSLLASLHDKNNNPVM---------- 454
+Y+ +L+A + LL L K +PV+
Sbjct: 245 EYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGL 304
Query: 455 --------AKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A +L EM GL+P++ Y ++ L
Sbjct: 305 SKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGL 339
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 9/163 (5%)
Query: 244 ALTKKG-IWRVVEVLNQV---GGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK---- 295
AL K G + VE+LNQ+ G S ++ +I+ S +G + A ++ + K
Sbjct: 268 ALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKP 327
Query: 296 -VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
+ Y+ L+ + R ++ +G +P +TYN ++ LCK + A + L
Sbjct: 328 DIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFL 387
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
M+ R C P +Y I I G A N++ RG+
Sbjct: 388 AYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNELCLRGV 430
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 61/144 (42%)
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N L L +NG+ + LE M+ R PD I I C++GK A +
Sbjct: 88 NNNLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIED 147
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM 454
G P + T+ I G R+ DA K + + S S + +++L + +
Sbjct: 148 SGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGR 207
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVL 478
A +VL +M K+G PN Y +L
Sbjct: 208 AIDVLEKMPKHGCTPNSLSYNPLL 231
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 5/208 (2%)
Query: 279 LGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLT 333
LG A + KK E+K V YN +I +C+ + L EM G P +T
Sbjct: 351 LGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVT 410
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
Y+ +L C GQ +A +L +EM+GRN P+ +T+ I + C+ G A F M
Sbjct: 411 YSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMT 470
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPV 453
++G++P + T+ A + GY + + +A K + K + Y++L + + +
Sbjct: 471 EKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMD 530
Query: 454 MAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
AK +L++M L PN Y ++K L
Sbjct: 531 KAKALLTQMSVKKLTPNTVTYNTIMKGL 558
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 22/236 (9%)
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDF 312
V+ + G C ++ +E+++ EM + E V YN LI +C +
Sbjct: 163 VITFTTLINGVCNEGKIKVAVELYN-----EMVR---SGHEPDVISYNTLINGLCNSGNT 214
Query: 313 KGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIF 372
+ +M Q GC+P +TYN ++ LCK+ DA + L EM+GR PDAITY
Sbjct: 215 NMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSI 274
Query: 373 IVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADK-- 430
+ C +G+ + A F +M + G +P + T+ I + DA ++ D+
Sbjct: 275 VHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGI 334
Query: 431 ---YKSSSNMLYSL--LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + +L+ L L L++ A + +M + G +P+V Y ++ L
Sbjct: 335 PPDVVTYTTILHGLCYLGQLNE-------AIRLFKKMEQKGCKPDVVAYNTIIDSL 383
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 5/213 (2%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
+++ LG A + K+ E+ V YNI+I + + D L EM
Sbjct: 273 SIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQ 332
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P +TY +L LC GQ +A L ++M + C PD + Y I C+ + A
Sbjct: 333 GIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDA 392
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
F ++MV RG+ P T++ + G+ + ++A + + + + +S+L
Sbjct: 393 MEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDG 452
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ A+ V M + G+ PN+ Y ++
Sbjct: 453 LCQEGMVSEARWVFETMTEKGVEPNIYTYNALM 485
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 98/240 (40%), Gaps = 26/240 (10%)
Query: 204 NCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVG-- 261
N G+LD+ QL + V N F L + + + + W V E + + G
Sbjct: 420 NLGQLDE---ATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARW-VFETMTEKGVE 475
Query: 262 -----------GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRC 310
G CL + ++F ++ V K + YNILI C
Sbjct: 476 PNIYTYNALMNGYCLRCKMNEARKVFEIM--------VGKGCAPDLHSYNILINGYCNSR 527
Query: 311 DFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYE 370
+ LL +M P T+TYN ++ LC G+ DA EL ++M P +TY
Sbjct: 528 RMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYS 587
Query: 371 IFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK-YVVLSAD 429
I + C+ G D A F M ++ L+P + + I+G FI + E A + LSAD
Sbjct: 588 ILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSAD 647
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 5/207 (2%)
Query: 280 GLYEMAKYVI-----KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
G+ A++V K E + YN L+ C RC R + M GC P +Y
Sbjct: 457 GMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSY 516
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N ++ C + + A LL +M + P+ +TY + C VG+ A F +M
Sbjct: 517 NILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCS 576
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM 454
G+ P L T++ + G ++A K +K +LY++L +
Sbjct: 577 SGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEV 636
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVLKHL 481
AK + S++ +G++P Y ++K L
Sbjct: 637 AKGLFSKLSADGIQPPGRTYNVMIKGL 663
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 89/201 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
++IL+ +C+ R + M + G EP TYN ++ C + +A ++ E M+
Sbjct: 446 FSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMV 505
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
G+ C PD +Y I I C + D A QM + L P T+ +KG R
Sbjct: 506 GKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLL 565
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA + + M YS+L + K+ + A + M + L P++ +Y ++
Sbjct: 566 DAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILI 625
Query: 479 KHLHTSHQEHMAKCLSSRYSS 499
+ + + +AK L S+ S+
Sbjct: 626 EGMFIGGKLEVAKGLFSKLSA 646
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 81/185 (43%), Gaps = 4/185 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++ +C L M Q GC+P +TYN ++ L K+ DA + L EM+
Sbjct: 271 YNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMV 330
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD +TY + C +G+ + A F +M ++G +P + + I
Sbjct: 331 DQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVN 390
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM--AKNVLSEMMKNGLRPNVSVYRR 476
DA +++ D+ + + YS + LH N + A + EM+ + PN +
Sbjct: 391 DAMEFLSEMVDRGIPPNAVTYSTI--LHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSI 448
Query: 477 VLKHL 481
++ L
Sbjct: 449 LVDGL 453
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 64/134 (47%)
Query: 289 IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
+KK YN ++K +C ++L +M G P +TY+ +L LCK+G
Sbjct: 541 VKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLD 600
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
+A +L + M + PD I Y I I GK +VA F+++ G+QP T+ I
Sbjct: 601 EALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMI 660
Query: 409 KGYFIFYRYEDAYK 422
KG ++AY+
Sbjct: 661 KGLLKEGLSDEAYE 674
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 80/190 (42%), Gaps = 14/190 (7%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
NILI +CR + +M ++G +P +T+ ++ +C G+ A EL EM+
Sbjct: 132 NILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVR 191
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
PD I+Y I C G ++A + F +M + G +P + T+ I D
Sbjct: 192 SGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVND 251
Query: 420 AYKYVVLSADKYKSSSNMLYS-------LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
A ++ + + Y+ L L++ A + M +NG +P+V
Sbjct: 252 AMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNE-------ATRLFKRMEQNGCKPDVV 304
Query: 473 VYRRVLKHLH 482
Y ++ L+
Sbjct: 305 TYNIIIDSLY 314
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 58/161 (36%), Gaps = 35/161 (21%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M G + N ++ LC+ A + +M PD IT+ I C G
Sbjct: 118 QMDLFGVTHTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEG 177
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
K VA +N+MV+ G +P + ++ I G
Sbjct: 178 KIKVAVELYNEMVRSGHEPDVISYNTLINGLC---------------------------- 209
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ N MA +V +M +NG +PNV Y ++ L
Sbjct: 210 -------NSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSL 243
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 108/234 (46%), Gaps = 8/234 (3%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKK-TER-----KVSYYNILIKE 305
RV++ + Q G V L++ F +G + A +++K TER ++Y NI+
Sbjct: 135 RVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIM-HG 193
Query: 306 MCRRCDFKGPRDLLVEMRQVG-CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHP 364
+C L EM + G C P TY+ ++ L K+G+ DAC L+E M+ + C P
Sbjct: 194 LCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSP 253
Query: 365 DAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV 424
+ +TY + C+ GK D A +M + G P + T+ I G+ R ++AY +
Sbjct: 254 NVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLL 313
Query: 425 VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
D + + Y++L K A ++ M++ G PN+ Y +L
Sbjct: 314 EEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLL 367
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 83/171 (48%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L+ M GC P +TY+ +L LCK G+ +A LL+ M C P+ +TY I C
Sbjct: 242 LVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHC 301
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
++G+ D A++ +MV G QP + T+ + + + EDA V + +K +
Sbjct: 302 KLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLF 361
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEH 488
Y+ L + K + A +LS M++ G PNV Y V+ L + + H
Sbjct: 362 TYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVH 412
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 1/184 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ C++ + + LL M Q GC P ++YN V+ LCK + + LLE+ML
Sbjct: 363 YNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQML 422
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
NC PD +T+ I C+ + D+A+ FN + + G P L T+ + + G R++
Sbjct: 423 SNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFD 482
Query: 419 DAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
A + K S +++ Y+ + K+ A + +M+ +GL P+ Y V
Sbjct: 483 QAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIV 542
Query: 478 LKHL 481
+ L
Sbjct: 543 ISSL 546
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 81/182 (44%), Gaps = 1/182 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEM-RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
YN L+ +C+ F LL EM R+ GC P +TYN V+ LCK+ + A +L +M
Sbjct: 468 YNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQM 527
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
L PD +TY I I C+ D A N M+K G P T+ I G+
Sbjct: 528 LSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNL 587
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ A + + L K + +S+ K A +L M++ GL P+ Y +
Sbjct: 588 DKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTL 647
Query: 478 LK 479
LK
Sbjct: 648 LK 649
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 1/201 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++ C+ + LL +M GC P ++Y V+ LCK Q +AC ++++M+
Sbjct: 82 YNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMI 141
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R C P+ ITY + CRVG D A +M +RG +P T+ + G + +
Sbjct: 142 QRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLD 201
Query: 419 DAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
A + + ++ YS + K+ A ++ M+ G PNV Y +
Sbjct: 202 SALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSL 261
Query: 478 LKHLHTSHQEHMAKCLSSRYS 498
L L + + A L R +
Sbjct: 262 LHGLCKAGKLDEATALLQRMT 282
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 1/173 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+I+I +C+ ++L M + G +P +TY ++ CK G A E+L+ +L
Sbjct: 539 YSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLL 598
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ +PD +T+ IFI + + G+ A M++ GL P T+ +KG+ R E
Sbjct: 599 SKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTE 658
Query: 419 DAYKYVVLSADKYKSSSNMLY-SLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
DA + N Y +L+ L DK + + V M+ G + N
Sbjct: 659 DAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLN 711
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 57/113 (50%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I + + LL EM G P +YN VL CK + +A LLE+M+
Sbjct: 47 YNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMV 106
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
R C PD ++Y I C++ + D A ++M++RG QP + T+ + G+
Sbjct: 107 MRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGF 159
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 1/200 (0%)
Query: 280 GLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
L+ + + V++ V Y +I +C+ ++ +M Q GC+P +TY ++
Sbjct: 98 ALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVD 157
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG-LQ 398
C+ G A EL+ +M R P+AITY + C K D A F +M + G
Sbjct: 158 GFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCP 217
Query: 399 PRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNV 458
P + T++ + + +DA + V K S + + YS L K A +
Sbjct: 218 PDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATAL 277
Query: 459 LSEMMKNGLRPNVSVYRRVL 478
L M ++G PN+ Y ++
Sbjct: 278 LQRMTRSGCSPNIVTYNTII 297
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 82/196 (41%), Gaps = 1/196 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y +L+ C+ + L+ M + G P TYN +L + CK + AC+LL
Sbjct: 325 VVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLS 384
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+ + C P+ ++Y I C+ K QM+ P + T I Y
Sbjct: 385 SMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTY 444
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM-KNGLRPNVSVY 474
R + AY+ L + + + + Y+ L K+ A+ +L EM K G P++ Y
Sbjct: 445 RVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITY 504
Query: 475 RRVLKHLHTSHQEHMA 490
V+ L S + A
Sbjct: 505 NTVIDGLCKSKRVDRA 520
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 77/174 (44%), Gaps = 2/174 (1%)
Query: 310 CDFKGPRDLLVEMRQVG--CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAI 367
CD D ++ R++ C P ++TYN ++ L K+ + DA LLEEM+ P+
Sbjct: 21 CDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVF 80
Query: 368 TYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLS 427
+Y + C+ + + A QMV RG P + ++ I G + ++A + +
Sbjct: 81 SYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKM 140
Query: 428 ADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + + Y L + + A ++ +M + G RPN Y ++ L
Sbjct: 141 IQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGL 194
>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 717
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN+ + +C++ +F+ DLL M G P +TY ++ KNG A E+
Sbjct: 495 VITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFN 554
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EML + P +TY + I D+AF +F++M+++ + + T+ A I G +
Sbjct: 555 EMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTR 614
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R ++AYKY +K + Y++L + A + EM+ ++P+ +
Sbjct: 615 RMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHS 674
Query: 476 RVLKHLHTSHQEHMAKCLSS 495
LK+LH +Q H +C+ S
Sbjct: 675 VFLKNLHRDYQVHAVQCVES 694
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 121/251 (48%), Gaps = 17/251 (6%)
Query: 167 LRVLNSEKVSALCFLKYMREIM--PEFYKNSD-----ICSLVIDNCGRLDDYETMRQLLN 219
+RVL+S ++ L++ R +M P+F K S+ I +++ N Y M ++++
Sbjct: 89 IRVLHSMRIRPRVALRFFRWVMAQPDF-KESEFVFCAILDILVGNDLMHAAYWVMERVVS 147
Query: 220 DFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVL 279
F ++ V ++ G + L+ + + G+ V+ N++ ++ L + +V
Sbjct: 148 -FEMHGV-VDVLIAGHVXCLLVFDKMIRNGLLPDVKNCNRILR--VLRDENLLSKAKNVY 203
Query: 280 GLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
G+ M ++ IK T V YN ++ C+ +LL EM++ GC P +TYN ++
Sbjct: 204 GM--MEQFGIKPT---VVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVN 258
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
L K G+ A L+EEML + A TY I C+ G F AF+ +MV R P
Sbjct: 259 GLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFP 318
Query: 400 RLATHAAFIKG 410
L+T+ + G
Sbjct: 319 TLSTYNTLMYG 329
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 78/191 (40%), Gaps = 1/191 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI +C L EM G P TY ++ K G + A
Sbjct: 390 VITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFN 449
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EML + PD Y IV ++ VAF+ +M+ G P + T+ F+
Sbjct: 450 EMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQG 509
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+E+A + ++ Y+ + + KN + A+ V +EM+ G+ P+V Y
Sbjct: 510 NFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTY- 568
Query: 476 RVLKHLHTSHQ 486
VL H H + Q
Sbjct: 569 TVLIHAHAAKQ 579
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M Q G +P +TYN +L CK G+ A ELL EM R C+P+ +TY + + + G+
Sbjct: 206 MEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGE 265
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
+ A +M+ GL T+ I G+
Sbjct: 266 LEQAKGLIEEMLNSGLNVSAYTYNPLINGF 295
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 73/179 (40%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+S YN L+ +C+ G R +M + P +++N +L C+ G ++A L +
Sbjct: 320 LSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFD 379
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
E+ R+ P ITY I C G D A +M +GL P + T+ + G F
Sbjct: 380 ELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLG 439
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
A + K Y+ K + +A ++ EM+ G P+V Y
Sbjct: 440 YVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITY 498
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y LI +C+ D +LL EM ++G +P TYN ++ LCK+G +A +L+
Sbjct: 879 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 938
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
E + D +TY + C+ G+ D A +M+ +GLQP + T + G+ +
Sbjct: 939 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHG 998
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
ED K + K + + ++ L + NN A + +M G+ P+ Y
Sbjct: 999 MLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYE 1058
Query: 476 RVLK 479
++K
Sbjct: 1059 NLVK 1062
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 104/244 (42%), Gaps = 4/244 (1%)
Query: 263 SCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSY-YNILIKEMCRRCDFKGPRDLLVE 321
S +++G E+ V L E K +K + SY Y +I +CR C + E
Sbjct: 708 STVINGYCRFGELDKVWKLIEKMK---QKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSE 764
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M G P T+ Y ++ CK G A + EM R+ PD +TY I C++G
Sbjct: 765 MIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 824
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
A F++M+ RGL+P + T + GY +DA++ S + + Y+
Sbjct: 825 MVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTT 884
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLS 501
L K + A +L EM K GL+PN+ Y ++ L S A L + +
Sbjct: 885 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 944
Query: 502 LGSS 505
L +
Sbjct: 945 LNAD 948
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 92/215 (42%), Gaps = 8/215 (3%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
V G C +RA + F YEM + V Y +I C+ D L
Sbjct: 781 VDGFCKRGDIRAASKFF-----YEMHS---RDITPDVLTYTAIISGFCQIGDMVEAGKLF 832
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
EM G EP +T+ ++ CK G DA + M+ C P+ +TY I C+
Sbjct: 833 HEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 892
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
G D A ++M K GLQP + T+ + + G E+A K V ++ + Y
Sbjct: 893 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 952
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ L + K+ A+ +L+EM+ GL+P + +
Sbjct: 953 TTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTF 987
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 77/176 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ C+ + +++L EM G +P +T+N ++ C +G D +LL ML
Sbjct: 952 YTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 1011
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+A T+ + C A + M RG++P T+ +KG+ +
Sbjct: 1012 AKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMK 1071
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+A+ K S S YS+L K V A+ + +M ++GL + ++
Sbjct: 1072 EAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIF 1127
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 90/222 (40%), Gaps = 11/222 (4%)
Query: 267 SGVRALIEMFSVLGLYEMAKYVIKKTERKVSYY--------NILIKEMCRRCDFKGPRDL 318
S R F VL + M K E+ ++Y N+ + + + C+ K +
Sbjct: 596 SDPRVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCN-KTATAI 654
Query: 319 LV--EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
+V E +VG +YN V+ +C+ G+ +A LL M + PD I+Y I
Sbjct: 655 IVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGY 714
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
CR G+ D + +M ++GL+P T+ + I + +A + +
Sbjct: 715 CRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDT 774
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
++Y+ L K + A EM + P+V Y ++
Sbjct: 775 IVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 816
>gi|294462290|gb|ADE76694.1| unknown [Picea sitchensis]
Length = 433
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 148/338 (43%), Gaps = 13/338 (3%)
Query: 135 EIIELLRSGDSETESKLLSMSVSLSNASVIEILRVLNSEKVSALCFLKYMREIMPEFYKN 194
EI +LL GD + E L + V+L+ V + ++ + AL F ++ + + P F +
Sbjct: 103 EICQLLEKGDEDMEEALTQLGVTLTPELVNRVFGKISVPSL-ALRFFQWAK-LQPGFKQV 160
Query: 195 SDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVV 254
+ + + GR D+E + +L + + + K F F + + V+
Sbjct: 161 TSNYERLANILGRAKDFEALHMILLEMSAVFCNYSAKTFSFATAWHDDPDMLNE----VM 216
Query: 255 EVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRR 309
E+L ++ L+ + A V++K + + Y LI+ C++
Sbjct: 217 EMLEKLELYLRTVAYEMLVSVLCQKNHANAALVVLEKMGSRDCALRMRTYRPLIQLYCQK 276
Query: 310 CDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITY 369
+++ ++ +PI Y+ VL LC + A+A + ++ M+ PDAIT+
Sbjct: 277 NRMAKVQEVFEMLKDCPRDPIC--YHIVLSALCNRKKFAEAVKFVKRMVNMGWKPDAITH 334
Query: 370 EIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSAD 429
+I I +C +G+ A F+++ + GL P T+ + G F +++A+ +++
Sbjct: 335 DIMIRAACNLGRIQGALKLFDRLKEEGLTPLYQTYVHILNGLFQIRGFDEAHSFLIQHGG 394
Query: 430 KYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
K + + Y L L K+ A+N++ EM G
Sbjct: 395 KDRKLDSTNYIHLIKLSSKSGQEQGARNLMEEMKAKGF 432
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 92/201 (45%), Gaps = 4/201 (1%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N L+ +C L+ M + G +P +TY VL V+CK+GQ A A ELL +M
Sbjct: 181 NALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEE 240
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
R DA+ Y I I C+ G D AFN FN+M +G + + + I+G+ R++D
Sbjct: 241 RKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDD 300
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
K + + + + +S L K A+ + EM++ G+ P+ Y ++
Sbjct: 301 GAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLID 360
Query: 480 HLHTSHQ----EHMAKCLSSR 496
+Q HM + S+
Sbjct: 361 GFCKENQLDKANHMLDLMVSK 381
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%)
Query: 289 IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
IK + + Y LI+ C + LL +M + P + ++ ++ K G+
Sbjct: 275 IKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLR 334
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
+A EL +EM+ R PD +TY I C+ + D A + + MV +G P + T I
Sbjct: 335 EAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILI 394
Query: 409 KGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLR 468
GY +D + + + + + Y+ L + +AK + EM+ +R
Sbjct: 395 NGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVR 454
Query: 469 PNVSVYRRVLKHL 481
P++ Y+ +L L
Sbjct: 455 PDIVSYKILLDGL 467
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 5/145 (3%)
Query: 271 ALIEMFSVLGLYEMAKYVIKK-TERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI+ F G A+ + K+ +R +S Y LI C+ +L M
Sbjct: 322 ALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK 381
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
GC P T+N ++ CK D EL +M R D +TY I C +GK +VA
Sbjct: 382 GCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVA 441
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKG 410
F +MV R ++P + ++ + G
Sbjct: 442 KELFQEMVSRRVRPDIVSYKILLDG 466
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 4/126 (3%)
Query: 290 KKTERKVSY----YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNG 345
K ERK+ Y+I+I +C+ +L EM G + + Y ++ C G
Sbjct: 237 KMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAG 296
Query: 346 QDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
+ D +LL +M+ R PD + + I + GK A +M++RG+ P T+
Sbjct: 297 RWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYT 356
Query: 406 AFIKGY 411
+ I G+
Sbjct: 357 SLIDGF 362
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 79/202 (39%)
Query: 280 GLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
GL K ++ YN LI+ C + ++L EM P ++Y +L
Sbjct: 406 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLD 465
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
LC NG+ A E+ E++ D Y I I C K D A++ F + +G++P
Sbjct: 466 GLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 525
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
+ T+ I G +A + S + Y++L H + + ++
Sbjct: 526 DVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLI 585
Query: 460 SEMMKNGLRPNVSVYRRVLKHL 481
E+ + G + S R L L
Sbjct: 586 EEIKRCGFSVDASTLRFALSTL 607
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 85/201 (42%), Gaps = 1/201 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ +NILI C+ +L +M G T+TYN ++ C+ G+ A EL +
Sbjct: 387 IRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQ 446
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM+ R PD ++Y+I + C G+ + A F ++ K ++ + + I G
Sbjct: 447 EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 506
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ +DA+ K Y+++ K + A + +M ++G PN Y
Sbjct: 507 KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYN 566
Query: 476 RVLK-HLHTSHQEHMAKCLSS 495
+++ HL AK +
Sbjct: 567 ILIRAHLGEGDATKSAKLIEE 587
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 73/176 (41%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ++K MC+ +LL +M + + + Y+ ++ LCK+G +A L EM
Sbjct: 215 YGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 274
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ D I Y I C G++D M+KR + P + +A I + +
Sbjct: 275 IKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLR 334
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+A + + S + Y+ L K N A ++L M+ G PN+ +
Sbjct: 335 EAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTF 390
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 78/205 (38%), Gaps = 26/205 (12%)
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
K E + YNI+I MC DL + G +P TYN ++G LCK G ++A
Sbjct: 487 KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA 546
Query: 351 CELLEEMLGRNCHPDAITYEIFI----------------------VYSCRVGKFDVAFNF 388
L +M P+ TY I I +S A +
Sbjct: 547 DLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALST 606
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYR---YEDAYKYVVLSADKYKSSSNMLYSLLASL 445
+M+K G +P + T ++ + + Y+ + + A YK + +++ L
Sbjct: 607 LARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGL 666
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPN 470
+ N VL +M + G +PN
Sbjct: 667 LN-GNMISQVPGVLDQMFERGCQPN 690
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 6/177 (3%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
DL EM + P + ++ + V+ + Q +L ++M + + T I I
Sbjct: 58 DLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCC 117
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSAD-KYKSSS 435
CR K +AF+ +++K G +P T + I G + R +A + V + +K +
Sbjct: 118 CRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTL 177
Query: 436 NMLYSLLAS--LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
L +L+ L+ K ++ V+ ++ M++ G +PN Y VLK + S Q +A
Sbjct: 178 ITLNALVNGLCLNGKVSDAVL---LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 47/118 (39%), Gaps = 10/118 (8%)
Query: 302 LIKEMCRRCDF-------KGPRDLLVEMRQVGCEPITLTYNYVLGVLC--KNGQDADACE 352
LI+E+ +RC F + L M + G EP T+ +L C +N DA
Sbjct: 584 LIEEI-KRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPT 642
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
L + M P+ +TY I +QM +RG QP T + FI G
Sbjct: 643 LFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISG 700
>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 587
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 106/224 (47%), Gaps = 4/224 (1%)
Query: 269 VRALIEMFSVLG-LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGC 327
V L E V G LY ++ + + YNIL+K +C ++ DL+ +M Q C
Sbjct: 334 VSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDC 393
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
P LT+N ++G LC+ G A E+ ++M + C P+++TY I + GK + +
Sbjct: 394 LPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLE 453
Query: 388 FFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHD 447
N+M +G P + H + + +A + V D S +LY+ +
Sbjct: 454 LLNEMGSKGFNPEINYHL-LAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLC 512
Query: 448 KNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
+N A ++LS M+ +G P+ S Y +++ L +H+ +M +
Sbjct: 513 RNGKTDQAIDILSNMVSDGCMPDESTYSILIQGL--AHEGYMKE 554
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 109/284 (38%), Gaps = 40/284 (14%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYY--NILIKEMCRR 309
RVVE G + AL + + +G + A+ V+ S Y N L+ +C R
Sbjct: 109 RVVEA---CGSAATAVTYSALADGYCRVGRLDEARRVVDGMPVLPSAYAYNPLMHALCVR 165
Query: 310 CDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITY 369
+ LL M GC P +TYN +L CK A EL++ M C P +TY
Sbjct: 166 GQVRDALVLLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTY 225
Query: 370 EIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV-LSA 428
+ + CR G D A N + G P + +KG R+ED + + + +
Sbjct: 226 NVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFS 285
Query: 429 DKYKSSSNMLYSLLASL------------------HDKNNNPVMAKNV------------ 458
+ S L +++SL HD N V V
Sbjct: 286 ENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDG 345
Query: 459 ----LSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYS 498
LS M +G +PN+ Y ++K L + + A+ L ++ S
Sbjct: 346 ALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMS 389
>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
Length = 1039
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 83/180 (46%), Gaps = 1/180 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +LI+ +C+ R LL EM + G P TYN ++ CK+G+ DA + M
Sbjct: 291 YTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLME 350
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
G C+PD TY I C GK D A N + RG P + T I GY + +
Sbjct: 351 GNGCNPDDWTYNSLIHGLCG-GKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKID 409
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA + + Y +L S+ K + AK+ L+E+ NGL PNV +Y ++
Sbjct: 410 DALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSII 469
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 98/223 (43%), Gaps = 38/223 (17%)
Query: 203 DNCGRLDDYETMRQ--LLNDFNVYQVCLN--------EKAFGFLPVLISSKALTKKGIWR 252
DN RL +E M Q L D Y V + E+A+ FL KKG+
Sbjct: 549 DNAFRL--FEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---------VKKGV-- 595
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNILIKEMC 307
VL +V + LV G FS G E A +I+K + Y++L++ +C
Sbjct: 596 ---VLTKVTYTSLVDG-------FSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALC 645
Query: 308 RRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAI 367
++ +L +M G + + Y ++ + K G+ A + EM+ P AI
Sbjct: 646 KQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAI 705
Query: 368 TYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
TY +FI C++G+ + A + +M + G+ P + T+ FI G
Sbjct: 706 TYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFING 748
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 3/180 (1%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N L+ CR D + LL+ M +GC +Y ++ LC+ +A LL ML
Sbjct: 222 NALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQ 281
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
C P+ TY + I C+ G+ A ++M +RG+ P + T+ A I GY R +D
Sbjct: 282 DGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKD 341
Query: 420 AYKYVVLSADKYKSSSNMLY-SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A L + + Y SL+ L P A+ +L+ + G P V + ++
Sbjct: 342 ALGIKTLMEGNGCNPDDWTYNSLIHGL--CGGKPDEAEELLNGAIARGFSPTVITFTNII 399
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 101/234 (43%), Gaps = 4/234 (1%)
Query: 251 WRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMA-KYVIKK--TERKVSYYNILIKEMC 307
+R+ E++ Q G + L + G E A +++KK KV+Y + L+
Sbjct: 552 FRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVKKGVVLTKVTYTS-LVDGFS 610
Query: 308 RRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAI 367
+ + + L+ +M GC+ + TY+ +L LCK + +A +L++M R + +
Sbjct: 611 KAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIV 670
Query: 368 TYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLS 427
Y I I + GK D A + FN+M+ G +P T+ FI Y R E+A +
Sbjct: 671 AYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEM 730
Query: 428 ADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + Y++ + A + L M+ PN Y +LKH
Sbjct: 731 ERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHF 784
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
LL M + G P +TY+ ++ CK + +AC LL+ MLG++ P+ Y + I C
Sbjct: 812 LLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCC 871
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ F+ A +F M++ G QP L ++ I G
Sbjct: 872 DIKLFEKAASFVTNMIECGFQPHLESYHYLITG 904
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 95/264 (35%), Gaps = 46/264 (17%)
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDF 312
V+ N + G C + + + S++ + K + + Y +LI + ++
Sbjct: 392 VITFTNIINGYCKAEKIDDALRVKSIM--------ISSKCKLDLQAYGVLISVLIKKHRL 443
Query: 313 KGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA------ 366
K +D L E+ G P + Y ++ CK G+ A E+ + C P+A
Sbjct: 444 KEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSL 503
Query: 367 -----------------------------ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
ITY I C+ +FD AF F M + GL
Sbjct: 504 IYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGL 563
Query: 398 QPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKN 457
P + R E+AY ++V K + + Y+ L K N A
Sbjct: 564 TPDEQAYNVLTDALCKSGRAEEAYSFLV---KKGVVLTKVTYTSLVDGFSKAGNTEFAAA 620
Query: 458 VLSEMMKNGLRPNVSVYRRVLKHL 481
++ +M+ G + + Y +L+ L
Sbjct: 621 LIEKMVNEGCKADSHTYSVLLQAL 644
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 77/186 (41%), Gaps = 3/186 (1%)
Query: 311 DFKGPRDLLVEMRQVGCEPITLT---YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAI 367
D + D + +R+ G + + L+ YN L L + +L +++ PD +
Sbjct: 125 DMREAVDAIQAIRRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTV 184
Query: 368 TYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLS 427
TY I+ C+ G +A +F + + G++ T A + GY A +++
Sbjct: 185 TYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMM 244
Query: 428 ADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQE 487
+ Y++L + A +L M+++G PN+ Y +++ L +
Sbjct: 245 PLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRI 304
Query: 488 HMAKCL 493
H A+ L
Sbjct: 305 HDARVL 310
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 92/201 (45%), Gaps = 4/201 (1%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N L+ +C L+ M + G +P +TY VL V+CK+GQ A A ELL +M
Sbjct: 181 NALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEE 240
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
R DA+ Y I I C+ G D AFN FN+M +G + + + I+G+ R++D
Sbjct: 241 RKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDD 300
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
K + + + + +S L K A+ + EM++ G+ P+ Y ++
Sbjct: 301 GAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLID 360
Query: 480 HLHTSHQ----EHMAKCLSSR 496
+Q HM + S+
Sbjct: 361 GFCKENQLDKANHMLDLMVSK 381
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 87/202 (43%)
Query: 289 IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
IK + + Y LI+ C + LL +M + P + ++ ++ K G+
Sbjct: 275 IKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLR 334
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
+A EL +EM+ R PD +TY I C+ + D A + + MV +G P + T I
Sbjct: 335 EAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILI 394
Query: 409 KGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLR 468
GY +D + + + + + Y+ L + +AK + EM+ +R
Sbjct: 395 NGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVR 454
Query: 469 PNVSVYRRVLKHLHTSHQEHMA 490
P++ Y+ +L L + + A
Sbjct: 455 PDIVSYKILLDGLCDNGEPEKA 476
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 5/145 (3%)
Query: 271 ALIEMFSVLGLYEMAKYVIKK-TERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI+ F G A+ + K+ +R +S Y LI C+ +L M
Sbjct: 322 ALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK 381
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
GC P T+N ++ CK D EL +M R D +TY I C +GK +VA
Sbjct: 382 GCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVA 441
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKG 410
F +MV R ++P + ++ + G
Sbjct: 442 KELFQEMVSRRVRPDIVSYKILLDG 466
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 4/126 (3%)
Query: 290 KKTERKVSY----YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNG 345
K ERK+ Y+I+I +C+ +L EM G + + Y ++ C G
Sbjct: 237 KMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAG 296
Query: 346 QDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
+ D +LL +M+ R PD + + I + GK A +M++RG+ P T+
Sbjct: 297 RWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYT 356
Query: 406 AFIKGY 411
+ I G+
Sbjct: 357 SLIDGF 362
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 80/202 (39%)
Query: 280 GLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
GL K ++ YN LI+ C + ++L EM P ++Y +L
Sbjct: 406 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLD 465
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
LC NG+ A E+ E++ D Y I I C K D A++ F + +G++P
Sbjct: 466 GLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 525
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
+ T+ I G +A + S + Y++L H + + ++
Sbjct: 526 DVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLI 585
Query: 460 SEMMKNGLRPNVSVYRRVLKHL 481
E+ + G + S + V+ L
Sbjct: 586 EEIKRCGFSVDASTVKMVVDML 607
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 85/201 (42%), Gaps = 1/201 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ +NILI C+ +L +M G T+TYN ++ C+ G+ A EL +
Sbjct: 387 IRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQ 446
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM+ R PD ++Y+I + C G+ + A F ++ K ++ + + I G
Sbjct: 447 EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 506
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ +DA+ K Y+++ K + A + +M ++G PN Y
Sbjct: 507 KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYN 566
Query: 476 RVLK-HLHTSHQEHMAKCLSS 495
+++ HL AK +
Sbjct: 567 ILIRAHLGEGDATKSAKLIEE 587
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 73/176 (41%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ++K MC+ +LL +M + + + Y+ ++ LCK+G +A L EM
Sbjct: 215 YGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 274
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ D I Y I C G++D M+KR + P + +A I + +
Sbjct: 275 IKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLR 334
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+A + + S + Y+ L K N A ++L M+ G PN+ +
Sbjct: 335 EAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTF 390
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 6/177 (3%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
DL EM + P + ++ + V+ + Q +L ++M + + T I I
Sbjct: 58 DLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCC 117
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSAD-KYKSSS 435
CR K +AF+ +++K G +P T + I G + R +A + V + +K +
Sbjct: 118 CRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTL 177
Query: 436 NMLYSLLAS--LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
L +L+ L+ K ++ V+ ++ M++ G +PN Y VLK + S Q +A
Sbjct: 178 ITLNALVNGLCLNGKVSDAVL---LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231
>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
Length = 347
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 94/195 (48%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +N+LI +CRR + ++L ++ + GC P +L+YN +L CK + A +E
Sbjct: 86 VVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFVE 145
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+ R C+PD ++Y + CR G+ DVA + +Q+ +G P L ++ I G
Sbjct: 146 LMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLISYNTVIDGLTKAG 205
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ ++A + + K + Y+ +AS + + A ++ G+RP V +Y
Sbjct: 206 KTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKVQDMGIRPTVVLYN 265
Query: 476 RVLKHLHTSHQEHMA 490
+L L + H A
Sbjct: 266 AILLGLCKRRETHNA 280
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 84/183 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ C++ + M GC P ++YN +L LC+NG+ A +LL ++
Sbjct: 124 YNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLK 183
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
G+ C P I+Y I + GK A ++M+ +GLQP + T+ G + E
Sbjct: 184 GKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIE 243
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + D + +LY+ + K A ++ S M+ NG PN S Y ++
Sbjct: 244 EAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILV 303
Query: 479 KHL 481
+ L
Sbjct: 304 EGL 306
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 86/192 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+++ +C+ + L + G EP T++YN VL L + DA +L+EEM
Sbjct: 19 YNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAERWEDAEKLMEEMA 78
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C P+ +T+ + I + CR G + A Q+ K G P ++ + + + +
Sbjct: 79 HKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMD 138
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A +V L + + Y+ L + +N +A ++L ++ G P + Y V+
Sbjct: 139 KAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLISYNTVI 198
Query: 479 KHLHTSHQEHMA 490
L + + A
Sbjct: 199 DGLTKAGKTKEA 210
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 2/143 (1%)
Query: 352 ELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
+LL+EM + C PD ITY + + C+ G+ D A F + G +P ++ +KG
Sbjct: 2 KLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGL 61
Query: 412 FIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
F R+EDA K + A K + + +++L S + A VL ++ K G PN
Sbjct: 62 FTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNS 121
Query: 472 SVYRRVLKHLHTSHQEHMAKCLS 494
Y +L Q+ M K ++
Sbjct: 122 LSYNPLLHAF--CKQKKMDKAMA 142
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 48/114 (42%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
+ + + K + + Y + +CR + +++ +G P + YN +L LCK
Sbjct: 214 LDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKVQDMGIRPTVVLYNAILLGLCK 273
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
+ +A +L M+ C P+ TY I + G A + Q+ RG+
Sbjct: 274 RRETHNAIDLFSYMISNGCMPNESTYTILVEGLAYEGLVKEARDLLGQLCSRGV 327
>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
Length = 526
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 119/272 (43%), Gaps = 14/272 (5%)
Query: 212 ETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCL--VSGV 269
E +R+ + D Y + LN G S +AL ++ ++ GG C V
Sbjct: 42 ELLRRGIPDVFSYNILLN----GLCDENRSQEAL------ELLHIMADDGGDCPPDVVSY 91
Query: 270 RALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEP 329
+I F G ++ K + ++ V YN +I +C+ ++L M + G P
Sbjct: 92 STVINGFFKEG--DLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMP 149
Query: 330 ITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFF 389
+TYN ++ C +GQ +A L++M PD +TY + Y C+ G+ A F
Sbjct: 150 DCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIF 209
Query: 390 NQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKN 449
+ M KRGL+P + T+ ++GY + + + L ++ ++S+L + K
Sbjct: 210 DSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQ 269
Query: 450 NNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A V S+M + GL PN Y V+ L
Sbjct: 270 EKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVL 301
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 89/207 (42%), Gaps = 13/207 (6%)
Query: 283 EMAKYVIKKTERK----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVG--CEPITLTYNY 336
E A++V + R+ V YNIL+ +C + +LL M G C P ++Y+
Sbjct: 34 EDARHVFDELLRRGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYST 93
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
V+ K G L++ML + P+ +TY I C+ D A MVK G
Sbjct: 94 VINGFFKEGD-------LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 146
Query: 397 LQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAK 456
+ P T+ + + G+ + ++A ++ + Y+ L KN A+
Sbjct: 147 VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEAR 206
Query: 457 NVLSEMMKNGLRPNVSVYRRVLKHLHT 483
+ M K GL+P+++ Y +L+ T
Sbjct: 207 KIFDSMTKRGLKPDITTYGTLLQGYAT 233
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 81/181 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
++ Y L++ + LL M + G P ++ ++ K + +A +
Sbjct: 221 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFS 280
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M + +P+A+TY I C+ G+ + A +F QM+ GL+P + + I IF
Sbjct: 281 KMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFD 340
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
++E A + + D+ S + ++ + H K + + + M++ G++P++
Sbjct: 341 KWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLG 400
Query: 476 R 476
R
Sbjct: 401 R 401
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 82/207 (39%), Gaps = 41/207 (19%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++ C K L +MR G EP +TYN ++ LCKNG+ +A ++ + M
Sbjct: 154 YNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMT 213
Query: 359 GRNCHPDAITYE--------------------------------IFIVYSC---RVGKFD 383
R PD TY +F + C + K +
Sbjct: 214 KRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVE 273
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY-SLL 442
A F++M ++GL P T+ I R EDA Y D+ +++Y SL+
Sbjct: 274 EAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLI 333
Query: 443 ASL--HDKNNNPVMAKNVLSEMMKNGL 467
SL DK A+ + EM+ G+
Sbjct: 334 HSLCIFDKWEK---AEELFLEMLDRGI 357
>gi|224144580|ref|XP_002325338.1| predicted protein [Populus trichocarpa]
gi|222862213|gb|EEE99719.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 2/194 (1%)
Query: 288 VIKKTER--KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNG 345
++KKT V YNILI +C+ + + V+M C P +TYN +L LCK G
Sbjct: 257 IMKKTSHPPTVVTYNILINGLCKCGLVERAINFFVQMVSENCSPDIITYNTLLTALCKEG 316
Query: 346 QDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
+A ++ + NC P ITY I R G D A +NQM+++G+ P TH
Sbjct: 317 MVDEALQVFVLLSDSNCSPGLITYNTVIDGLTRRGYMDEALKLYNQMIEKGIAPDGITHR 376
Query: 406 AFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKN 465
+ + G+ + EDA + + + ++ Y L+ + +N +A VL M+
Sbjct: 377 SLVWGFCWIDQVEDAVEILREMGKRDHRINSSAYRLVINGLCRNKRVDIAIQVLEMMISG 436
Query: 466 GLRPNVSVYRRVLK 479
+P+ +Y ++K
Sbjct: 437 RYKPDEEIYSTLIK 450
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 79/183 (43%), Gaps = 6/183 (3%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
LI+ + R + +L M G P +TYN ++G CK Q A +LLE+M
Sbjct: 63 LIRGLVRIGRIERASRVLKTMVMSGLVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSG 122
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
C PD ITY I GKFD A F+ ++RG P L + I+ + +++
Sbjct: 123 CPPDVITYNTIIRSLFDNGKFDQAVEFWRGQLRRGCLPYLIPYTILIE---LVWKHCGTV 179
Query: 422 KYVVLSADKYKSS---SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ + + D + Y+ L + K A ++ ++ +G+ PN Y +L
Sbjct: 180 RALEVLEDMAIEGCYPDLVTYNSLVNFASKEGKYEDAALIIYNILSHGMEPNAITYNSLL 239
Query: 479 KHL 481
L
Sbjct: 240 HSL 242
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 96/235 (40%), Gaps = 28/235 (11%)
Query: 257 LNQVGGS-CLVSGVRALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRC 310
+NQ+ S C + +R L+ +G E A V+K V YN+++ C+R
Sbjct: 51 VNQIPNSTCSTNLIRGLVR----IGRIERASRVLKTMVMSGLVPDVITYNMMVGGFCKRR 106
Query: 311 DFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYE 370
+ DLL +M GC P +TYN ++ L NG+ A E L R C P I Y
Sbjct: 107 QLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDNGKFDQAVEFWRGQLRRGCLPYLIPYT 166
Query: 371 IFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADK 430
I I + A M G P L T+ + + F E K
Sbjct: 167 ILIELVWKHCGTVRALEVLEDMAIEGCYPDLVTYNSLVN----FASKE----------GK 212
Query: 431 YKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSH 485
Y+ ++ ++Y++L+ H N + ++L + GL V ++K TSH
Sbjct: 213 YEDAALIIYNILS--HGMEPNAITYNSLLHSLCSCGLWDEVDEILAIMK--KTSH 263
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 84/215 (39%), Gaps = 35/215 (16%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ILI+ + + C ++L +M GC P +TYN ++ K G+ DA ++ +L
Sbjct: 165 YTILIELVWKHCGTVRALEVLEDMAIEGCYPDLVTYNSLVNFASKEGKYEDAALIIYNIL 224
Query: 359 GRNCHPDAI-----------------------------------TYEIFIVYSCRVGKFD 383
P+AI TY I I C+ G +
Sbjct: 225 SHGMEPNAITYNSLLHSLCSCGLWDEVDEILAIMKKTSHPPTVVTYNILINGLCKCGLVE 284
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
A NFF QMV P + T+ + ++A + VL +D S + Y+ +
Sbjct: 285 RAINFFVQMVSENCSPDIITYNTLLTALCKEGMVDEALQVFVLLSDSNCSPGLITYNTVI 344
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ A + ++M++ G+ P+ +R ++
Sbjct: 345 DGLTRRGYMDEALKLYNQMIEKGIAPDGITHRSLV 379
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 75/176 (42%), Gaps = 2/176 (1%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEP-ITLTYNYVLGVLCKNGQDADACELLEEML 358
N ++ +C++ L+ M +V P T + N + G L + G+ A +L+ M+
Sbjct: 26 NEILHNLCKKGSLMEATKLIDIMSRVNQIPNSTCSTNLIRG-LVRIGRIERASRVLKTMV 84
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD ITY + + C+ + A + M G P + T+ I+ F +++
Sbjct: 85 MSGLVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDNGKFD 144
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
A ++ + + Y++L L K+ V A VL +M G P++ Y
Sbjct: 145 QAVEFWRGQLRRGCLPYLIPYTILIELVWKHCGTVRALEVLEDMAIEGCYPDLVTY 200
>gi|18071401|gb|AAL58260.1|AC068923_2 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 627
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 119/272 (43%), Gaps = 14/272 (5%)
Query: 212 ETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCL--VSGV 269
E +R+ + D Y + LN G S +AL ++ ++ GG C V
Sbjct: 42 ELLRRGIPDVFSYNILLN----GLCDENRSQEAL------ELLHIMADDGGDCPPDVVSY 91
Query: 270 RALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEP 329
+I F G ++ K + ++ V YN +I +C+ ++L M + G P
Sbjct: 92 STVINGFFKEG--DLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMP 149
Query: 330 ITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFF 389
+TYN ++ C +GQ +A L++M PD +TY + Y C+ G+ A F
Sbjct: 150 DCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIF 209
Query: 390 NQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKN 449
+ M KRGL+P + T+ ++GY + + + L ++ ++S+L + K
Sbjct: 210 DSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQ 269
Query: 450 NNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A V S+M + GL PN Y V+ L
Sbjct: 270 EKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVL 301
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 89/207 (42%), Gaps = 13/207 (6%)
Query: 283 EMAKYVIKKTERK----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVG--CEPITLTYNY 336
E A++V + R+ V YNIL+ +C + +LL M G C P ++Y+
Sbjct: 34 EDARHVFDELLRRGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYST 93
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
V+ K G L++ML + P+ +TY I C+ D A MVK G
Sbjct: 94 VINGFFKEGD-------LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 146
Query: 397 LQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAK 456
+ P T+ + + G+ + ++A ++ + Y+ L KN A+
Sbjct: 147 VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEAR 206
Query: 457 NVLSEMMKNGLRPNVSVYRRVLKHLHT 483
+ M K GL+P+++ Y +L+ T
Sbjct: 207 KIFDSMTKRGLKPDITTYGTLLQGYAT 233
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 82/183 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
++ Y L++ + LL M + G P ++ ++ K + +A +
Sbjct: 221 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFS 280
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M + +P+A+TY I C+ G+ + A +F QM+ GL+P + + I IF
Sbjct: 281 KMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFD 340
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
++E A + + D+ S + ++ + H K + + + M++ G++P++
Sbjct: 341 KWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLG 400
Query: 476 RVL 478
R L
Sbjct: 401 RFL 403
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 82/207 (39%), Gaps = 41/207 (19%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++ C K L +MR G EP +TYN ++ LCKNG+ +A ++ + M
Sbjct: 154 YNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMT 213
Query: 359 GRNCHPDAITYE--------------------------------IFIVYSC---RVGKFD 383
R PD TY +F + C + K +
Sbjct: 214 KRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVE 273
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY-SLL 442
A F++M ++GL P T+ I R EDA Y D+ +++Y SL+
Sbjct: 274 EAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLI 333
Query: 443 ASL--HDKNNNPVMAKNVLSEMMKNGL 467
SL DK A+ + EM+ G+
Sbjct: 334 HSLCIFDKWEK---AEELFLEMLDRGI 357
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 35/76 (46%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P TYN +L LCKN DA + + + + +A T+ I I +VG+ D A +
Sbjct: 450 PFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDL 509
Query: 389 FNQMVKRGLQPRLATH 404
F GL P T+
Sbjct: 510 FVAFSSNGLVPNYWTY 525
>gi|41152692|dbj|BAD08216.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 401
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 119/272 (43%), Gaps = 14/272 (5%)
Query: 212 ETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCL--VSGV 269
E +R+ + D Y + LN G S +AL ++ ++ GG C V
Sbjct: 42 ELLRRGIPDVFSYNILLN----GLCDENRSQEAL------ELLHIMADDGGDCPPDVVSY 91
Query: 270 RALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEP 329
+I F G ++ K + ++ V YN +I +C+ ++L M + G P
Sbjct: 92 STVINGFFKEG--DLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMP 149
Query: 330 ITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFF 389
+TYN ++ C +GQ +A L++M PD +TY + Y C+ G+ A F
Sbjct: 150 DCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIF 209
Query: 390 NQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKN 449
+ M KRGL+P + T+ ++GY + + + L ++ ++S+L + K
Sbjct: 210 DSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQ 269
Query: 450 NNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A V S+M + GL PN Y V+ L
Sbjct: 270 EKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVL 301
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 89/207 (42%), Gaps = 13/207 (6%)
Query: 283 EMAKYVIKKTERK----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVG--CEPITLTYNY 336
E A++V + R+ V YNIL+ +C + +LL M G C P ++Y+
Sbjct: 34 EDARHVFDELLRRGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYST 93
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
V+ K G L++ML + P+ +TY I C+ D A MVK G
Sbjct: 94 VINGFFKEGD-------LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 146
Query: 397 LQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAK 456
+ P T+ + + G+ + ++A ++ + Y+ L KN A+
Sbjct: 147 VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEAR 206
Query: 457 NVLSEMMKNGLRPNVSVYRRVLKHLHT 483
+ M K GL+P+++ Y +L+ T
Sbjct: 207 KIFDSMTKRGLKPDITTYGTLLQGYAT 233
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 81/181 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
++ Y L++ + LL M + G P ++ ++ K + +A +
Sbjct: 221 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFS 280
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M + +P+A+TY I C+ G+ + A +F QM+ GL+P + + I IF
Sbjct: 281 KMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFD 340
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
++E A + + D+ S + ++ + H K + + + M++ G++P++
Sbjct: 341 KWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLG 400
Query: 476 R 476
R
Sbjct: 401 R 401
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 82/207 (39%), Gaps = 41/207 (19%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++ C K L +MR G EP +TYN ++ LCKNG+ +A ++ + M
Sbjct: 154 YNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMT 213
Query: 359 GRNCHPDAITYE--------------------------------IFIVYSC---RVGKFD 383
R PD TY +F + C + K +
Sbjct: 214 KRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVE 273
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY-SLL 442
A F++M ++GL P T+ I R EDA Y D+ +++Y SL+
Sbjct: 274 EAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLI 333
Query: 443 ASL--HDKNNNPVMAKNVLSEMMKNGL 467
SL DK A+ + EM+ G+
Sbjct: 334 HSLCIFDKWEK---AEELFLEMLDRGI 357
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 114/242 (47%), Gaps = 3/242 (1%)
Query: 269 VRALIEMFSVLGLYEMAKYVIKKTERKVSY-YNILIKEMCRRCDFKGPRDLLVEMRQVGC 327
VR L +M + + K +++ + R + YN++I+ R + K LL EM G
Sbjct: 264 VRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGI 323
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
P TY+ ++ LC++G+ A +LLEEM + P+A Y I CR G +A
Sbjct: 324 SPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACE 383
Query: 388 FFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHD 447
F++M K + P L + + I G R E++ KY ++ + YS L +
Sbjct: 384 IFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYL 443
Query: 448 KNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSVE 507
KN + A+ ++ M+ GL+PN +Y +L+ S + + K S+ S L G ++
Sbjct: 444 KNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKS--DDIEKVSSTFKSMLDQGVMLD 501
Query: 508 AR 509
R
Sbjct: 502 NR 503
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 149/363 (41%), Gaps = 54/363 (14%)
Query: 157 SLSNASVIEILRVLNSEKVSALCFLKYMREIMPEFYKNSDICSLVIDN---CGRLDDYET 213
+L+N +I+++R S V R + +++ + +++D GR+ D
Sbjct: 12 NLANGLLIKMIRAYPSPPV---VLASIHRALSDSGHRSPAVLDVLVDTYKKSGRVQDAAE 68
Query: 214 MRQLLNDFNVYQV--CLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRA 271
+ ++ D + C N L L+ + A+ +W+V E + G S V
Sbjct: 69 VVLMMRDRGLAPSIRCCN----ALLKDLLRADAMAL--LWKVREFMVGAGISPDVYTYST 122
Query: 272 LIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LIE + + ++ AK V+ + + YN+LI +CR + +M G
Sbjct: 123 LIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYG 182
Query: 327 CEPITLTYNYVLGVLCKN-----------------------------------GQDADAC 351
P TY ++ LCK+ G +A
Sbjct: 183 LVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAF 242
Query: 352 ELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
++++EM+ P+ ITY+ + C++G+ D A QMV+ +P T+ I+G+
Sbjct: 243 KMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGH 302
Query: 412 FIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
F + +DA++ + + S + YS++ ++ P A ++L EM GL+PN
Sbjct: 303 FRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNA 362
Query: 472 SVY 474
VY
Sbjct: 363 FVY 365
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 92/221 (41%), Gaps = 35/221 (15%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+I+I +C+ + + DLL EM G +P Y ++ C+ G + ACE+ +
Sbjct: 327 VYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFD 386
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M N PD Y I +VG+ + + +F QM +RGL P T++ I GY
Sbjct: 387 KMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNG 446
Query: 416 RYEDAYK----------------YVVLSADKYKSS-------------------SNMLYS 440
E A + Y+ L +KS N +Y
Sbjct: 447 DLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYG 506
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+L + N A VLSE+ KNG P+V VY ++ L
Sbjct: 507 ILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGL 547
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 96/242 (39%), Gaps = 35/242 (14%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ LI+ C+ +F + +LVEMR+ GC T+TYN ++ LC++G +A +
Sbjct: 117 VYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKK 176
Query: 356 EMLGRNCHPDAITYEIFIVYSC-----------------------------------RVG 380
+M PD TY I C R G
Sbjct: 177 DMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREG 236
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
D AF +MV G+QP T+ ++G + + A + + Y+
Sbjct: 237 NADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYN 296
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSL 500
L+ H +++N A +LSEM G+ PNV Y ++ L S + A L ++
Sbjct: 297 LIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTK 356
Query: 501 SL 502
L
Sbjct: 357 GL 358
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 5/144 (3%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI S G E A V+ + E+ V Y+ LI +C+ D + +L EM + G
Sbjct: 508 LIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKG 567
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
+P + YN ++ LCK+G + A + +L + P+ +TY I SC+VG AF
Sbjct: 568 VDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAF 627
Query: 387 NFFNQMVKRGLQPRLATHAAFIKG 410
+N+M+ G+ P ++ G
Sbjct: 628 YLYNEMLATGITPDAFVYSVLTTG 651
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ILI + + + +L E+ + G P Y+ ++ LCK A +L+EM
Sbjct: 505 YGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMS 564
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ P+ + Y I C+ G A N FN ++ +GL P T+ + I G
Sbjct: 565 KKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDG 616
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 12/196 (6%)
Query: 209 DDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGG------ 262
DD E + V L+ + +G L +SS + +RV+ + + G
Sbjct: 481 DDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSG-NMEAAFRVLSEIEKNGSVPDVHV 539
Query: 263 -SCLVSGVRALIEMFSVLG-LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLV 320
S L+SG+ + G L EM+K K + + YN LI +C+ D R++
Sbjct: 540 YSSLISGLCKTADREKAFGILDEMSK---KGVDPNIVCYNALIDGLCKSGDISYARNVFN 596
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+ G P +TY ++ CK G ++A L EML PDA Y + G
Sbjct: 597 SILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAG 656
Query: 381 KFDVAFNFFNQMVKRG 396
+ A +M RG
Sbjct: 657 DLEQAMFLIEEMFLRG 672
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 77/189 (40%), Gaps = 8/189 (4%)
Query: 294 RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACEL 353
R + ++L+ + + ++++ MR G P N +L L + ADA L
Sbjct: 45 RSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLR----ADAMAL 100
Query: 354 L----EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
L E M+G PD TY I C+V +FD A +M +RG T+ I
Sbjct: 101 LWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIA 160
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
G E+A+ + D Y L + K+ AK +L EM L+P
Sbjct: 161 GLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKP 220
Query: 470 NVSVYRRVL 478
NV VY ++
Sbjct: 221 NVVVYANLI 229
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 78/200 (39%), Gaps = 4/200 (2%)
Query: 283 EMAKYVIKKTERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
E KY + ER + Y+ LI + D + L+ M G +P + Y +L
Sbjct: 415 ESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLL 474
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
K+ + ML + D Y I I G + AF +++ K G
Sbjct: 475 ESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSV 534
Query: 399 PRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNV 458
P + +++ I G E A+ + + K + + Y+ L K+ + A+NV
Sbjct: 535 PDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNV 594
Query: 459 LSEMMKNGLRPNVSVYRRVL 478
+ ++ GL PN Y ++
Sbjct: 595 FNSILAKGLVPNCVTYTSLI 614
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 1/212 (0%)
Query: 269 VRALIEMFSVLGLYEMAKYVIKKTERKVSY-YNILIKEMCRRCDFKGPRDLLVEMRQVGC 327
VR L +M + + K +++ + R + YN++I+ R K LL EM G
Sbjct: 369 VRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGI 428
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
P TY+ ++ LC++G+ A +LLEEM + P+A Y I CR G +A
Sbjct: 429 SPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACE 488
Query: 388 FFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHD 447
F++M K + P L + + I G R E++ KY ++ + YS L +
Sbjct: 489 IFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYL 548
Query: 448 KNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
KN + A+ ++ M+ GL+PN +Y +L+
Sbjct: 549 KNGDLESAEQLVQRMLDTGLKPNDVIYIDLLE 580
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 85/176 (48%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI +C+ + LL EM +P + Y ++ + G +A ++++EM+
Sbjct: 295 YGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMV 354
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ ITY+ + C++G+ D A QMV+ +P T+ I+G+F + +
Sbjct: 355 AAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKK 414
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
DA++ + + S + YS++ ++ P A ++L EM GL+PN VY
Sbjct: 415 DAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVY 470
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 89/189 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+I+I +C+ + + DLL EM G +P Y ++ C+ G + ACE+ +
Sbjct: 432 VYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFD 491
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M N PD Y I +VG+ + + +F QM +RGL P T++ I GY
Sbjct: 492 KMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNG 551
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A + V D ++++Y L + K+++ + M+ G+ + +Y
Sbjct: 552 DLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYG 611
Query: 476 RVLKHLHTS 484
++ +L +S
Sbjct: 612 ILIHNLSSS 620
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 5/144 (3%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI S G E A V+ E+ V Y+ LI +C+ D + +L EM + G
Sbjct: 613 LIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKG 672
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
+P + YN ++ LCK+G + A + +L + P+ +TY I SC+VG AF
Sbjct: 673 VDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAF 732
Query: 387 NFFNQMVKRGLQPRLATHAAFIKG 410
+N+M+ G+ P ++ G
Sbjct: 733 YLYNEMLATGITPDAFVYSVLTTG 756
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 90/231 (38%), Gaps = 35/231 (15%)
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
C+ +F + +LVEMR+ GC T+TYN ++ LC++G +A ++M PD
Sbjct: 233 CKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDG 292
Query: 367 ITYEIFIVYSC-----------------------------------RVGKFDVAFNFFNQ 391
TY I C R G D AF +
Sbjct: 293 FTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKE 352
Query: 392 MVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNN 451
MV G+QP T+ ++G + + A + + Y+L+ H ++++
Sbjct: 353 MVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHS 412
Query: 452 PVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSL 502
A +LSEM G+ PNV Y ++ L S + A L ++ L
Sbjct: 413 KKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL 463
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 12/196 (6%)
Query: 209 DDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGG------ 262
DD E + V L+ + +G L +SS + +RV+ + + G
Sbjct: 586 DDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSG-NMEAAFRVLSGIEKNGSVPDVHV 644
Query: 263 -SCLVSGVRALIEMFSVLG-LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLV 320
S L+SG+ + G L EM+K K + + YN LI +C+ D R++
Sbjct: 645 YSSLISGLCKTADREKAFGILDEMSK---KGVDPNIVCYNALIDGLCKSGDISYARNVFN 701
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+ G P +TY ++ CK G ++A L EML PDA Y + G
Sbjct: 702 SILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAG 761
Query: 381 KFDVAFNFFNQMVKRG 396
+ A +M RG
Sbjct: 762 DLEQAMFLIEEMFLRG 777
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 50/112 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ILI + + + +L + + G P Y+ ++ LCK A +L+EM
Sbjct: 610 YGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMS 669
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ P+ + Y I C+ G A N FN ++ +GL P T+ + I G
Sbjct: 670 KKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDG 721
Score = 42.0 bits (97), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 4/200 (2%)
Query: 283 EMAKYVIKKTERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
E KY + ER + Y+ LI + D + L+ M G +P + Y +L
Sbjct: 520 ESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLL 579
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
K+ + ML + D Y I I G + AF + + K G
Sbjct: 580 ESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSV 639
Query: 399 PRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNV 458
P + +++ I G E A+ + + K + + Y+ L K+ + A+NV
Sbjct: 640 PDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNV 699
Query: 459 LSEMMKNGLRPNVSVYRRVL 478
+ ++ GL PN Y ++
Sbjct: 700 FNSILAKGLVPNCVTYTSLI 719
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 2/233 (0%)
Query: 269 VRALIEMFSVLGLYEMAKYVIKKTERKVSY-YNILIKEMCRRCDFKGPRDLLVEMRQVGC 327
+R L ++ + ++ +IK R ++ Y+ L++ + D G +LL EMR G
Sbjct: 392 IRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGI 451
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
P TY ++ LC+NG+ +A LLEEM+ P+A Y I+ + G +A
Sbjct: 452 LPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACE 511
Query: 388 FFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHD 447
M K + P L + + IKG R E+A +Y + YS L +
Sbjct: 512 SLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYC 571
Query: 448 KNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK-HLHTSHQEHMAKCLSSRYSS 499
K N A +L +M+ +GL+PN Y +L+ + ++ E ++ L S S
Sbjct: 572 KTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGS 624
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 90/188 (47%), Gaps = 1/188 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ +C+ K + LL EM G +P + Y ++ K G+ A+A ++L EM+
Sbjct: 318 YGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMI 377
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ I Y+ I C++G+ A N+M+K G +P T+ ++G+F Y +
Sbjct: 378 SAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKD 437
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR-V 477
A++ + + + Y ++ + +N A N+L EM+ GL+PN +Y +
Sbjct: 438 GAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLI 497
Query: 478 LKHLHTSH 485
+ H H
Sbjct: 498 IGHSKEGH 505
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 88/196 (44%), Gaps = 4/196 (2%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ ++ C+ DF + + EMR+ C +TYN ++ LC++G +A E
Sbjct: 245 VYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKE 304
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM+ PDA TY + C+ G+ A ++M GL+P + +A + G+
Sbjct: 305 EMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEG 364
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ +A+ + + ++Y L K A +L+EM+K G RP+ Y
Sbjct: 365 KAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYH 424
Query: 476 RVLKHLHTSHQEHMAK 491
+++ H +H K
Sbjct: 425 PLMQ----GHFQHYDK 436
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 86/183 (46%), Gaps = 2/183 (1%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE-LLEEML 358
N L+K++ R + L M G P TY+ L CK +D DA + + EEM
Sbjct: 214 NGLLKDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCK-ARDFDAAKKVFEEMR 272
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R+C + +TY + I CR G + AF F +MV GL P T+ A + G R +
Sbjct: 273 RRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLK 332
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + + + ++Y+ L K A ++L+EM+ G++PN +Y ++
Sbjct: 333 EAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLI 392
Query: 479 KHL 481
+ L
Sbjct: 393 RGL 395
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 76/169 (44%), Gaps = 5/169 (2%)
Query: 263 SCLVSGVRALIEMFSVLGLY-EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
S L+SG+ + +M +GL EMAK + E + YN LI CR D R++
Sbjct: 669 SSLISGLCKMADMEKAVGLLDEMAK---EGLEPGIVCYNALIDGFCRSGDISRARNVFDS 725
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
+ G P +TY ++ CKNG DA +L ++ML R PDA Y +
Sbjct: 726 ILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAAD 785
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADK 430
+ A +M RG ++ + ++G+ R ++ K + + D+
Sbjct: 786 LEQALFLTEEMFNRGYA-HVSLFSTLVRGFCKRGRLQETEKLLHVMMDR 833
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 5/122 (4%)
Query: 283 EMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYV 337
E+A V+ + E+ + Y+ LI +C+ D + LL EM + G EP + YN +
Sbjct: 647 EVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNAL 706
Query: 338 LGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
+ C++G + A + + +L + P+ +TY I +C+ G AF+ + M+ RG+
Sbjct: 707 IDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGI 766
Query: 398 QP 399
P
Sbjct: 767 AP 768
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 88/213 (41%), Gaps = 5/213 (2%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERKVSY-----YNILIKEMCRRCDFKGPRDLLVEMRQV 325
+LI+ S +G E A+ + +++ Y+ LI C+ + + LL +M
Sbjct: 530 SLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNS 589
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G +P TY +L K+ +L+ MLG PD Y I I R +VA
Sbjct: 590 GLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVA 649
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
F ++ K GL P L +++ I G E A + A + + Y+ L
Sbjct: 650 FMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDG 709
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
++ + A+NV ++ GL PN Y ++
Sbjct: 710 FCRSGDISRARNVFDSILAKGLLPNCVTYTALI 742
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 64/146 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y I+I+ + R + + +L E+ + G P Y+ ++ LCK A LL+EM
Sbjct: 633 YGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMA 692
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P + Y I CR G A N F+ ++ +GL P T+ A I G
Sbjct: 693 KEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDIT 752
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLAS 444
DA+ D+ + +Y++LA+
Sbjct: 753 DAFDLYKDMLDRGIAPDAFVYNVLAT 778
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 113/242 (46%), Gaps = 3/242 (1%)
Query: 269 VRALIEMFSVLGLYEMAKYVIKKTERKVSY-YNILIKEMCRRCDFKGPRDLLVEMRQVGC 327
VR L +M + + K +++ + R + YN++I+ R K LL EM G
Sbjct: 391 VRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGI 450
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
P TY+ ++ LC++G+ A +LLEEM + P+A Y I CR G +A
Sbjct: 451 SPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACE 510
Query: 388 FFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHD 447
F++M K + P L + + I G R E++ KY ++ + YS L +
Sbjct: 511 IFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYL 570
Query: 448 KNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSVE 507
KN + A+ ++ M+ GL+PN +Y +L+ S + + K S+ S L G ++
Sbjct: 571 KNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKS--DDIEKVSSTFKSMLDQGVMLD 628
Query: 508 AR 509
R
Sbjct: 629 NR 630
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 149/363 (41%), Gaps = 54/363 (14%)
Query: 157 SLSNASVIEILRVLNSEKVSALCFLKYMREIMPEFYKNSDICSLVIDN---CGRLDDYET 213
+L+N +I+++R S V R + +++ + +++D GR+ D
Sbjct: 139 NLANGLLIKMIRAYPSPPV---VLASIHRALSDSGHRSPAVLDVLVDTYKKSGRVQDAAE 195
Query: 214 MRQLLNDFNVYQV--CLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRA 271
+ ++ D + C N L L+ + A+ +W+V E + G S V
Sbjct: 196 VVLMMRDRGMAPSIRCCN----ALLKDLLRADAMAL--LWKVREFMVGAGISPDVYTYST 249
Query: 272 LIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LIE + + ++ AK V+ + + YN+LI +CR + +M G
Sbjct: 250 LIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYG 309
Query: 327 CEPITLTYNYVLGVLCKN-----------------------------------GQDADAC 351
P TY ++ LCK+ G +A
Sbjct: 310 LVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAF 369
Query: 352 ELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
++++EM+ P+ ITY+ + C++G+ D A QMV+ +P T+ I+G+
Sbjct: 370 KMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGH 429
Query: 412 FIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
F + +DA++ + + S + YS++ ++ P A ++L EM GL+PN
Sbjct: 430 FRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNA 489
Query: 472 SVY 474
VY
Sbjct: 490 FVY 492
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 89/189 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+I+I +C+ + + DLL EM G +P Y ++ C+ G + ACE+ +
Sbjct: 454 VYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFD 513
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M N PD Y I +VG+ + + +F QM +RGL P T++ I GY
Sbjct: 514 KMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNG 573
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A + V D ++++Y L + K+++ + M+ G+ + +Y
Sbjct: 574 DLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYG 633
Query: 476 RVLKHLHTS 484
++ +L +S
Sbjct: 634 ILIHNLSSS 642
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 96/242 (39%), Gaps = 35/242 (14%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ LI+ C+ +F + +LVEMR+ GC T+TYN ++ LC++G +A +
Sbjct: 244 VYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKK 303
Query: 356 EMLGRNCHPDAITYEIFIVYSC-----------------------------------RVG 380
+M PD TY I C R G
Sbjct: 304 DMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREG 363
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
D AF +MV G+QP T+ ++G + + A + + Y+
Sbjct: 364 NADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYN 423
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSL 500
L+ H ++++ A +LSEM G+ PNV Y ++ L S + A L ++
Sbjct: 424 LIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTK 483
Query: 501 SL 502
L
Sbjct: 484 GL 485
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 5/144 (3%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI S G E A V+ E+ V Y+ LI +C+ D + +L EM + G
Sbjct: 635 LIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKG 694
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
+P + YN ++ LCK+G + A + +L + P+ +TY I SC+VG AF
Sbjct: 695 VDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAF 754
Query: 387 NFFNQMVKRGLQPRLATHAAFIKG 410
+N+M+ G+ P ++ G
Sbjct: 755 YLYNEMLATGITPDAFVYSVLTTG 778
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 12/196 (6%)
Query: 209 DDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGG------ 262
DD E + V L+ + +G L +SS + +RV+ + + G
Sbjct: 608 DDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSG-NMEAAFRVLSGIEKNGSVPDVHV 666
Query: 263 -SCLVSGVRALIEMFSVLG-LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLV 320
S L+SG+ + G L EM+K K + + YN LI +C+ D R++
Sbjct: 667 YSSLISGLCKTADREKAFGILDEMSK---KGVDPNIVCYNALIDGLCKSGDISYARNVFN 723
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+ G P +TY ++ CK G ++A L EML PDA Y + G
Sbjct: 724 SILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAG 783
Query: 381 KFDVAFNFFNQMVKRG 396
+ A +M RG
Sbjct: 784 DLEQAMFLIEEMFLRG 799
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 50/112 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ILI + + + +L + + G P Y+ ++ LCK A +L+EM
Sbjct: 632 YGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMS 691
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ P+ + Y I C+ G A N FN ++ +GL P T+ + I G
Sbjct: 692 KKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDG 743
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 77/189 (40%), Gaps = 8/189 (4%)
Query: 294 RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACEL 353
R + ++L+ + + ++++ MR G P N +L L + ADA L
Sbjct: 172 RSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLR----ADAMAL 227
Query: 354 L----EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
L E M+G PD TY I C+V +FD A +M +RG T+ I
Sbjct: 228 LWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIA 287
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
G E+A+ + D Y L + K+ AK +L EM L+P
Sbjct: 288 GLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKP 347
Query: 470 NVSVYRRVL 478
NV VY ++
Sbjct: 348 NVVVYANLI 356
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 4/200 (2%)
Query: 283 EMAKYVIKKTERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
E KY + ER + Y+ LI + D + L+ M G +P + Y +L
Sbjct: 542 ESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLL 601
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
K+ + ML + D Y I I G + AF + + K G
Sbjct: 602 ESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSV 661
Query: 399 PRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNV 458
P + +++ I G E A+ + + K + + Y+ L K+ + A+NV
Sbjct: 662 PDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNV 721
Query: 459 LSEMMKNGLRPNVSVYRRVL 478
+ ++ GL PN Y ++
Sbjct: 722 FNSILAKGLVPNCVTYTSLI 741
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 113/255 (44%), Gaps = 10/255 (3%)
Query: 234 GFLPVLISSKALTK--------KGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMA 285
G +P +I+ +L + K R++E+L G V LI + G + A
Sbjct: 136 GDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKA 195
Query: 286 KYVIKK--TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
V+++ V YN +++ +C K ++L Q C P +TY ++ C
Sbjct: 196 LEVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCN 255
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
+ A +LL+EM + C PD +TY + I C+ G+ D A F N M G +P + T
Sbjct: 256 DSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVIT 315
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
H ++ R+ DA + + K S S + +++L + + A +VL +M
Sbjct: 316 HNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMP 375
Query: 464 KNGLRPNVSVYRRVL 478
K+G PN Y +L
Sbjct: 376 KHGCVPNSLSYNPLL 390
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 106/257 (41%), Gaps = 43/257 (16%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+ +C SGV +++ L EM K K + V YN+LI +C+ L
Sbjct: 250 IEATCNDSGVGQAMKL-----LDEMRK---KGCKPDVVTYNVLINGICKEGRLDEAIKFL 301
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
M GC+P +T+N +L +C G+ DA LL +ML + C P +T+ I I + CR
Sbjct: 302 NNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRK 361
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV--------------- 424
A + +M K G P ++ + G+ + + A +Y+
Sbjct: 362 RLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTY 421
Query: 425 --VLSADKYKSSSNMLYSLLASLHDKNNNPVM------------------AKNVLSEMMK 464
+L+A + +L L K +PV+ A +L EM +
Sbjct: 422 NTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRR 481
Query: 465 NGLRPNVSVYRRVLKHL 481
GL+P++ Y +L+ L
Sbjct: 482 KGLKPDIITYSTLLRGL 498
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 67/144 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ +C+ ++L ++ GC P+ +TYN V+ L K G+ A ELLEEM
Sbjct: 421 YNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMR 480
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD ITY + R GK D A F+ M ++P T+ A + G +
Sbjct: 481 RKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTS 540
Query: 419 DAYKYVVLSADKYKSSSNMLYSLL 442
A ++ +K + Y++L
Sbjct: 541 RAIDFLAYMVEKGCKPTEATYTIL 564
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 85/177 (48%), Gaps = 2/177 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ C+ + L M GC P +TYN +L LCK+G+ A E+L ++
Sbjct: 386 YNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLS 445
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C P ITY I +VGK + A +M ++GL+P + T++ ++G + +
Sbjct: 446 SKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVD 505
Query: 419 DAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+A K + + K S+ +++ L K A + L+ M++ G +P + Y
Sbjct: 506 EAIKIFHDMEGLSIKPSAVTYNAIMLGLC-KAQQTSRAIDFLAYMVEKGCKPTEATY 561
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 74/175 (42%), Gaps = 3/175 (1%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
NI ++++ R + + L M G P + ++ C++G+ A ++E +
Sbjct: 110 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILEN 169
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
PD ITY + I C+ G+ D A +M + P + T+ ++ + ++
Sbjct: 170 SGAVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKE 226
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
A + + + + Y++L ++ A +L EM K G +P+V Y
Sbjct: 227 AMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTY 281
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%)
Query: 279 LGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
LG +AK + + + +N LI +C+ F +L +M G +P TY ++
Sbjct: 175 LGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTII 234
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
LCK G+ A L +M C PD +TY I C+ + + A + F+ M +G+
Sbjct: 235 NGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGIS 294
Query: 399 PRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNV 458
P + T+ + I+G F R+ +A + + + +SLL ++ K N A+ V
Sbjct: 295 PNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGV 354
Query: 459 LSEMMKNGLRPNVSVYRRVL 478
L M + G+ PNV Y ++
Sbjct: 355 LKTMTEMGVEPNVVTYSSLM 374
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 5/215 (2%)
Query: 272 LIEMFSVLGLYEMAKYVIKK-----TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI +F G A+ V+K E V Y+ L+ + + R L M G
Sbjct: 338 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKG 397
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
C+P +YN ++ CK + +A +L EM+ + PD ++Y I C++G+ A
Sbjct: 398 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 457
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
+ F M+ G P L T++ + G+ A++ Y + ++Y++L
Sbjct: 458 DLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAM 517
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K+ N A+ + SE+ GL+PNV +Y ++ L
Sbjct: 518 CKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGL 552
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 98/219 (44%), Gaps = 2/219 (0%)
Query: 263 SCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
+ +++G+ + E + GL+ K + V Y+ +I +C+ D+ M
Sbjct: 231 TTIINGLCKIGETVAAAGLFR--KMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYM 288
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
+ G P TYN ++ LC + +A +L EM+ N P+ +T+ + I C+ G
Sbjct: 289 KAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNV 348
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
A M + G++P + T+++ + GY + +A K + K Y++L
Sbjct: 349 FEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNIL 408
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + K AK + +EM+ GL P++ Y ++ L
Sbjct: 409 INGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGL 447
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 46/107 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNILI MC+ + K R L E+ G +P Y ++ LCK G +A E M
Sbjct: 510 YNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNME 569
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
C P+ +Y + I + A +M ++G +AT A
Sbjct: 570 EDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVATTA 616
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 3/131 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+IL+ C++ L M+ +P + YN ++ +CK+ +A +L E+
Sbjct: 475 YSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELF 534
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+ Y I C+ G D A F M + G P ++ I+G F +++
Sbjct: 535 VQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRG---FLQHK 591
Query: 419 DAYKYVVLSAD 429
D + V L +
Sbjct: 592 DESRAVQLIGE 602
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI +C+ + +LL EMR+ G + YN ++ +CK G A +L++EM
Sbjct: 471 YGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEME 530
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PDAITY I CR+G D A +M+ RGLQP + T + G+ + E
Sbjct: 531 VAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLE 590
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
D + + +K + Y+ L H N+ + M G+ P+ + Y ++
Sbjct: 591 DGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILI 650
Query: 479 K 479
K
Sbjct: 651 K 651
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 101/229 (44%), Gaps = 5/229 (2%)
Query: 259 QVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFK 313
Q+G + + ALI+ G + A ++ + +K V YN ++ +C+ + +
Sbjct: 461 QMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIE 520
Query: 314 GPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFI 373
L+ EM G +P +TY V+ C+ G A +LL+EML R P +T+ + +
Sbjct: 521 QAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLM 580
Query: 374 VYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKS 433
C +G + M+++G+ P T+ +K + I K ++ +
Sbjct: 581 NGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVA 640
Query: 434 SSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLH 482
+ Y++L H K N A + EM++ G P V+ Y ++K +
Sbjct: 641 PDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFY 689
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 80/180 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNI+I +CR K LL++M P ++Y+ V+ C G+ A +L+++M
Sbjct: 261 YNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQ 320
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+ TY I+ C++GK A +M+ + + P + I G+F
Sbjct: 321 IKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVR 380
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A K+ K S + Y+ L + + +N+ EM+ GL+P+ Y ++
Sbjct: 381 TANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLI 440
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 112/248 (45%), Gaps = 5/248 (2%)
Query: 239 LISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK--- 295
+S A +GI ++V + G S + +I LG + A ++ + + +
Sbjct: 231 FLSRIANNSEGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSST 290
Query: 296 --VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACEL 353
V Y+ +I C + K L+ +M+ G +P TYN ++ +LCK G+ +A ++
Sbjct: 291 PDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKV 350
Query: 354 LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
L EM+ + PD + Y I ++G A +F++M+ + + P T+ I+G+
Sbjct: 351 LREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQ 410
Query: 414 FYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
+ + + + Y+ L ++ K V A ++ +EM++ G+ PN+
Sbjct: 411 GGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVT 470
Query: 474 YRRVLKHL 481
Y ++ L
Sbjct: 471 YGALIDGL 478
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 5/209 (2%)
Query: 271 ALIEMFSVLGLYEMA-KYVIKKTERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQV 325
LI F LG A K+ + +K+S Y LI+ + P++L EM
Sbjct: 368 TLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISR 427
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G +P +TY ++ V CK G+ +A L EM+ P+ +TY I C+ G+ D A
Sbjct: 428 GLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTA 487
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
++M K+GLQ + + + + G E A K + + Y+ +
Sbjct: 488 NELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDA 547
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + + A +L EM+ GL+P V +
Sbjct: 548 YCRLGDIDKAHKLLQEMLDRGLQPTVVTF 576
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 45/99 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNILIK C+ + K L EM + G P +YN ++ K + +A EL EEM
Sbjct: 646 YNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMR 705
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
G D Y F+ G ++ N ++ +++ L
Sbjct: 706 GHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEKCL 744
Score = 38.9 bits (89), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 122/300 (40%), Gaps = 47/300 (15%)
Query: 101 SCRSQISKLGLLTSRCISSFAMVNG--PYATPKQVSEIIELLRSGDSETESKLLSMSVSL 158
S +++ ++G+ T ++ A+++G + +E+++ +R K L ++V +
Sbjct: 454 SLHNEMVQMGM-TPNIVTYGALIDGLCKHGELDTANELLDEMRK-------KGLQLNVCI 505
Query: 159 SNASVIEILRVLNSEKVSALCFLKYMREI-MPEFYKNSDICSLVIDNCGRLDDYETMRQL 217
N+ V I + N E+ +K M+E+ + ++ + VID RL D + +L
Sbjct: 506 YNSMVNGICKAGNIEQA-----IKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKL 560
Query: 218 LNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFS 277
L Q L+ G P +++ L + G C++ ++E
Sbjct: 561 L------QEMLDR---GLQPTVVTFNVL--------------MNGFCML----GMLEDGD 593
Query: 278 VLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYV 337
L + + K ++ YN L+K+ C R + MR G P + TYN +
Sbjct: 594 RLLGWMLEKGIVPDA----ITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNIL 649
Query: 338 LGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
+ CK +A L +EM+ + P +Y I + K A F +M GL
Sbjct: 650 IKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGL 709
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 117/262 (44%), Gaps = 13/262 (4%)
Query: 233 FGFLPVLISSKAL-----TKKGIWRVVEVLNQV---GGSCLVSGVRALIEMFSVLGLYEM 284
G P I+ AL + I VE+ N++ G V +I G M
Sbjct: 157 LGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSM 216
Query: 285 AKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
A V KK E+ V Y+ +I +C+ + L EM + G P TYN ++
Sbjct: 217 AVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVH 276
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
C GQ +A L +EM+GR+ P+ +T+ I + C+ G A F M ++G++P
Sbjct: 277 GFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEP 336
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
++T+ A + GY + +A K + K + Y++L + + K+ AK++L
Sbjct: 337 DISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLL 396
Query: 460 SEMMKNGLRPNVSVYRRVLKHL 481
+EM L P+ Y +++ L
Sbjct: 397 AEMYHKALNPDTVTYSTLMQGL 418
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 97/234 (41%), Gaps = 40/234 (17%)
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMC 307
V E + + G +S AL++ + + L AK V + RK YNILI C
Sbjct: 325 VFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYC 384
Query: 308 RRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAI 367
+ + LL EM P T+TY+ ++ LC+ G+ +A L +EM HP+ +
Sbjct: 385 KSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLV 444
Query: 368 TYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLS 427
TY I + C+ G D A M ++ L+P + + I+G FI + E
Sbjct: 445 TYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLE--------- 495
Query: 428 ADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+AK + S++ +G RP++ Y ++K L
Sbjct: 496 --------------------------VAKELFSKLFGDGTRPDIRTYTVMIKGL 523
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 76/179 (42%), Gaps = 35/179 (19%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
NILI +CR +L +M ++G P +T+N ++ LC G+ +A EL EM+
Sbjct: 132 NILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVK 191
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
R P+ I+Y I C+ G +A + F +M + G +P + T++ I
Sbjct: 192 RGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDS--------- 242
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
L D+ + A LSEM++ G+ PNV Y ++
Sbjct: 243 ------LCKDRLVND--------------------AMEFLSEMVERGIPPNVFTYNSIV 275
Score = 38.5 bits (88), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Query: 272 LIEMFSVLGLYEMAKYVIKK-----TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LIE + G E+AK + K T + Y ++IK + + DL +M G
Sbjct: 484 LIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDG 543
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFI 373
P + +YN ++ +N + A L++EM+G+ + T+++ +
Sbjct: 544 FLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLL 590
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 3/176 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ +I +C+ + D+ EM C P +TYN ++G C+ G +A LL +M+
Sbjct: 258 YSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMV 314
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
NC PD ITY + C++G+ D A+ F QMV L P + T + + G R E
Sbjct: 315 DDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRME 374
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
DA + + + + Y+ + + K+N A+ ++++ G PN Y
Sbjct: 375 DALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTY 430
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 8/204 (3%)
Query: 299 YNILIKEMCR--RCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
Y+ L+ +C+ R D + LL E+ + G P +TY+ V+ LCK G+ DA ++ EE
Sbjct: 222 YSALVDGLCKCERLD-EAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEE 280
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
M +C P AITY I CR G D A +MV P + T+ + + R
Sbjct: 281 M---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGR 337
Query: 417 YEDAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+DAY+ + + A+K SL+ L + A +L E+ + G P + Y
Sbjct: 338 LDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMED-ALELLEEITRRGCPPTIYTYN 396
Query: 476 RVLKHLHTSHQEHMAKCLSSRYSS 499
V+ S+Q A+ L + + S
Sbjct: 397 CVVDGYCKSNQVRKAEELVADFRS 420
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 5/204 (2%)
Query: 271 ALIEMFSVLGLYEM-AKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEP 329
A +M + YE+ + V K V + L+ +C + +LL E+ + GC P
Sbjct: 331 AFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPP 390
Query: 330 ITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFF 389
TYN V+ CK+ Q A EL+ + R P+ +TY I + CR G+ D A +
Sbjct: 391 TIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYL 450
Query: 390 NQMVKRG--LQPRLATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSNMLYSLLASLH 446
+Q+ G +A +A + R +DA + Y + Y ++ +++ +L
Sbjct: 451 DQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALC 510
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPN 470
K + P A +L EM+K G P
Sbjct: 511 -KAHQPQQAHELLEEMIKYGHTPG 533
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 89/237 (37%), Gaps = 18/237 (7%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+GG C + I + + K V V Y L+ C+ +L
Sbjct: 294 IGGYCRAGDMDEAIRL--------LGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELF 345
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
+M P +T+ ++ LC G+ DA ELLEE+ R C P TY + C+
Sbjct: 346 QQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKS 405
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKS------ 433
+ A RG P T+ + G R + A +Y+ D+ S
Sbjct: 406 NQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYL----DQLNSEGGPCP 461
Query: 434 SSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
+S +Y+++ ++ A EM++ G P + + V+ L +HQ A
Sbjct: 462 TSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQA 518
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 5/188 (2%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+YYN LI +C+ LL++M+ G P TL +N V+G LC+ G+ A +
Sbjct: 81 TTYYN-LIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYR 139
Query: 356 EMLGRNCH-PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
+M + H PD +TY + + G+ A +MV P T ++ +
Sbjct: 140 QM--NDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLG 197
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYS-LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
R +DA + V + +++ + YS L+ L +L E+ + G P++
Sbjct: 198 DRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVT 257
Query: 474 YRRVLKHL 481
Y V+ L
Sbjct: 258 YSTVIDGL 265
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 2/115 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVG--CEPITLTYNYVLGVLCKNGQDADACELLEE 356
YNIL+ CR L ++ G C Y +L LC++G+ DA + EE
Sbjct: 430 YNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEE 489
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
M+ R P A T+ + C+ + A +M+K G P T A + Y
Sbjct: 490 MIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAY 544
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 41/97 (42%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V+ Y I++ +CR EM Q G P T+ V+ LCK Q A ELLE
Sbjct: 464 VAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLE 523
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
EM+ P T + + CR G A +++
Sbjct: 524 EMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 560
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 88/183 (48%), Gaps = 6/183 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ +C+ + +LL M + C P +TY+ ++ LCK G+ DA LLE ML
Sbjct: 340 YNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMML 399
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R C P+ +T+ I C+ GK D M + P + T++ I GY R +
Sbjct: 400 ERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQ 459
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA+ + +S DK S S+ML L ++ + A+ V+ M K G P S Y ++
Sbjct: 460 DAFAILGISPDK-ASYSSMLEGLCSTGKVEE-----AQEVMDLMTKQGCPPTSSHYALII 513
Query: 479 KHL 481
L
Sbjct: 514 GGL 516
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 6/186 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ +C++ + LL EM + G EP T +YN V+ LC++G+ +A ++LE+M+
Sbjct: 200 YNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMI 259
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C PD +TY + C+V K D A MV R P + T+ I G+ R
Sbjct: 260 EKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLA 319
Query: 419 DAYKYVVLSADKYKSSSN---MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
DAY+ + D +K+ + + Y+ L K A +L M++ P+V Y
Sbjct: 320 DAYRVM---EDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYS 376
Query: 476 RVLKHL 481
++ L
Sbjct: 377 ILVNGL 382
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 113/233 (48%), Gaps = 1/233 (0%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCD 311
+V+E++ +V + V LI+ + + A ++ + K SY ++L + +C
Sbjct: 428 KVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILGISPDKASYSSML-EGLCSTGK 486
Query: 312 FKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEI 371
+ ++++ M + GC P + Y ++G LC + +A ++L+ M R C P+ TY I
Sbjct: 487 VEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSI 546
Query: 372 FIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKY 431
I C+ + + A N + M+++G P +AT+ + I G+ + + AY+ D
Sbjct: 547 LINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSG 606
Query: 432 KSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTS 484
+ Y++L S ++ N A V+ M++ G P+ + Y +++ L T
Sbjct: 607 CEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSLTTE 659
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 6/204 (2%)
Query: 288 VIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQD 347
V ++ V Y LI R ++ +M + G P +TYN +L LCK G+
Sbjct: 294 VGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKL 353
Query: 348 ADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAF 407
+A ELLE M+ ++C PD +TY I + C++GK D A M++RG QP L T
Sbjct: 354 EEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTM 413
Query: 408 IKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
I G+ + ++ +K + L + + + YS L + K N A +L G+
Sbjct: 414 IDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GI 467
Query: 468 RPNVSVYRRVLKHLHTSHQEHMAK 491
P+ + Y +L+ L ++ + A+
Sbjct: 468 SPDKASYSSMLEGLCSTGKVEEAQ 491
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 103/224 (45%), Gaps = 12/224 (5%)
Query: 263 SCLVSGVRALIEMFSVLGLYEMAKYVIKKT-ER----KVSYYNILIKEMCRRCDFKGPRD 317
+CL++G +G + A+ V+K ER V Y LI C+ R
Sbjct: 131 NCLIAG-------LCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARK 183
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L+ +M++ G P T+ YN +L LCK Q + +LLEEM+ PD +Y + C
Sbjct: 184 LMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLC 243
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
GK++ A +M+++ P + T+ + + G+ + ++A + + + + + +
Sbjct: 244 ESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVI 303
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y+ L + + A V+ +M K G+ P++ Y +L L
Sbjct: 304 TYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGL 347
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 103/221 (46%), Gaps = 7/221 (3%)
Query: 271 ALIEMFSVLG----LYEMAKYVI-KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI FS G + E+A ++ ++ V +N ++K C+ D R L ++
Sbjct: 29 ALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLD--RALSHFRGKM 86
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
C P TY ++ LC+ + +A +LL+EM+ ++CHPDA Y I C++GK D A
Sbjct: 87 WCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAA 146
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
N M++R P + T+ + I G ++A K + + + + Y+ L +
Sbjct: 147 RNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNG 206
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
K N +L EM++ G P+ Y V+ L S +
Sbjct: 207 LCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGK 247
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ILI +C+ LL EM Q C P YN ++ LCK G+ A +L+ ML
Sbjct: 95 YCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMML 154
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R+C PD ITY IV C+ D A +M + GL P + A + G + E
Sbjct: 155 ERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLE 214
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ K + + + Y+ + + ++ A +L +M++ P+V Y ++
Sbjct: 215 EVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLM 274
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 62/151 (41%), Gaps = 2/151 (1%)
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
+P TY ++ + G E+ EML R PD IT+ + C++G D A +
Sbjct: 21 KPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALS 80
Query: 388 FFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHD 447
F K P T+ I G R ++AY+ + K +Y+ L +
Sbjct: 81 HFRG--KMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLC 138
Query: 448 KNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
K A+NVL M++ P+V Y ++
Sbjct: 139 KMGKIDAARNVLKMMLERSCVPDVITYTSLI 169
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI +C+ + +LL EMR+ G + YN ++ +CK G A +L++EM
Sbjct: 471 YGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEME 530
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PDAITY I CR+G D A +M+ RGLQP + T + G+ + E
Sbjct: 531 VAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLE 590
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
D + + +K + Y+ L H N+ + M G+ P+ + Y ++
Sbjct: 591 DGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILI 650
Query: 479 K 479
K
Sbjct: 651 K 651
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 101/229 (44%), Gaps = 5/229 (2%)
Query: 259 QVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFK 313
Q+G + + ALI+ G + A ++ + +K V YN ++ +C+ + +
Sbjct: 461 QMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIE 520
Query: 314 GPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFI 373
L+ EM G +P +TY V+ C+ G A +LL+EML R P +T+ + +
Sbjct: 521 QAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLM 580
Query: 374 VYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKS 433
C +G + M+++G+ P T+ +K + I K ++ +
Sbjct: 581 NGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVA 640
Query: 434 SSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLH 482
+ Y++L H K N A + EM++ G P V+ Y ++K +
Sbjct: 641 PDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFY 689
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 80/180 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNI+I +CR K LL++M P ++Y+ V+ C G+ A +L+++M
Sbjct: 261 YNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQ 320
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+ TY I+ C++GK A +M+ + + P + I G+F
Sbjct: 321 IKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVR 380
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A K+ K S + Y+ L + + +N+ EM+ GL+P+ Y ++
Sbjct: 381 TANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLI 440
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 112/248 (45%), Gaps = 5/248 (2%)
Query: 239 LISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK--- 295
+S A +GI ++V + G S + +I LG + A ++ + + +
Sbjct: 231 FLSRIANNSEGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSST 290
Query: 296 --VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACEL 353
V Y+ +I C + K L+ +M+ G +P TYN ++ +LCK G+ +A ++
Sbjct: 291 PDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKV 350
Query: 354 LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
L EM+ + PD + Y I ++G A +F++M+ + + P T+ I+G+
Sbjct: 351 LREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQ 410
Query: 414 FYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
+ + + + Y+ L ++ K V A ++ +EM++ G+ PN+
Sbjct: 411 GGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVT 470
Query: 474 YRRVLKHL 481
Y ++ L
Sbjct: 471 YGALIDGL 478
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 5/209 (2%)
Query: 271 ALIEMFSVLGLYEMA-KYVIKKTERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQV 325
LI F LG A K+ + +K+S Y LI+ + P++L EM
Sbjct: 368 TLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISR 427
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G +P +TY ++ V CK G+ +A L EM+ P+ +TY I C+ G+ D A
Sbjct: 428 GLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTA 487
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
++M K+GLQ + + + + G E A K + + Y+ +
Sbjct: 488 NELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDA 547
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + + A +L EM+ GL+P V +
Sbjct: 548 YCRLGDIDKAHKLLQEMLDRGLQPTVVTF 576
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 78/212 (36%), Gaps = 44/212 (20%)
Query: 245 LTKKGIWRVVEVLN-QVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILI 303
+ KKG+ V + N V G C + I++ M + + + Y +I
Sbjct: 494 MRKKGLQLNVCIYNSMVNGICKAGNIEQAIKL--------MKEMEVAGIDPDAITYTTVI 545
Query: 304 KEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH 363
CR D LL EM G +P +T+N ++ C G D LL ML +
Sbjct: 546 DAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIV 605
Query: 364 PDAIT-----------------------------------YEIFIVYSCRVGKFDVAFNF 388
PDAIT Y I I C+ A+
Sbjct: 606 PDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFL 665
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
+ +M+++G P + ++ A IK ++ ++ +A
Sbjct: 666 YKEMIEKGYVPTVTSYNALIKRFYKKRKFXEA 697
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 45/99 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNILIK C+ + K L EM + G P +YN ++ K + +A EL EEM
Sbjct: 646 YNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMR 705
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
G D Y F+ G ++ N ++ +++ L
Sbjct: 706 GHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEKCL 744
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 123/300 (41%), Gaps = 47/300 (15%)
Query: 101 SCRSQISKLGLLTSRCISSFAMVNG--PYATPKQVSEIIELLRSGDSETESKLLSMSVSL 158
S +++ ++G+ T ++ A+++G + +E+++ +R K L ++V +
Sbjct: 454 SLHNEMVQMGM-TPNIVTYGALIDGLCKHGELDTANELLDEMRK-------KGLQLNVCI 505
Query: 159 SNASVIEILRVLNSEKVSALCFLKYMREI-MPEFYKNSDICSLVIDNCGRLDDYETMRQL 217
N+ V I + N E+ +K M+E+ + ++ + VID RL D + +L
Sbjct: 506 YNSMVNGICKAGNIEQA-----IKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKL 560
Query: 218 LNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFS 277
L Q L+ G P +++ L + G C++ ++E
Sbjct: 561 L------QEMLDR---GLQPTVVTFNVL--------------MNGFCML----GMLEDGD 593
Query: 278 VLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYV 337
L + + K ++ YN L+K+ C R + MR G P + TYN +
Sbjct: 594 RLLGWMLEKGIVPDA----ITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNIL 649
Query: 338 LGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
+ CK +A L +EM+ + P +Y I + KF A F +M GL
Sbjct: 650 IKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGL 709
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 108/232 (46%), Gaps = 5/232 (2%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKK-----TERKVSYYNILIKEM 306
RV+E L+ G + V ++ G + A ++++ E V YN ++K +
Sbjct: 215 RVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGL 274
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
C + ++L+ EM ++ C P +T+N ++ LC+NG E+L +M+ C PD
Sbjct: 275 CMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDI 334
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
Y I C+ G +VA N+M GL+P + + +KG R+E+ + +
Sbjct: 335 RMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAE 394
Query: 427 SADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DK ++ +++L +N +L +M+++G P+V Y V+
Sbjct: 395 MFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVI 446
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 116/279 (41%), Gaps = 12/279 (4%)
Query: 211 YETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQ-VGGSCL--VS 267
+E +LL + L++ F L L RV+E+L Q + C+ V
Sbjct: 385 WEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVD----RVIELLEQMLEHGCMPDVI 440
Query: 268 GVRALIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
+I F GL + A ++K + Y I++K +C + DL+ +M
Sbjct: 441 TYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQM 500
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
Q GC +T+N ++ LCK G A ELL++ML C PD I+Y I + GK
Sbjct: 501 IQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 560
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
D A N MV +G+ P +++ R + D S +LY+ +
Sbjct: 561 DEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAV 620
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
S K A L+ M+ +G PN S Y +++ L
Sbjct: 621 ISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGL 659
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 110/255 (43%), Gaps = 9/255 (3%)
Query: 245 LTKKGIW-RVVEVLNQVGGSCLVSGVR---ALIEMFSVLGLYEMAKYVIKKT-----ERK 295
L + G++ RV EVL Q+ +R +I+ G E+A ++ + +
Sbjct: 309 LCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPN 368
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN L+K +C ++ +LL EM C +T+N ++ C+NG ELLE
Sbjct: 369 VVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLE 428
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML C PD ITY I C+ G D A M G +P ++ +KG
Sbjct: 429 QMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAE 488
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R+ DA + + + + ++ L + K A +L +M+ NG P++ Y
Sbjct: 489 RWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYS 548
Query: 476 RVLKHLHTSHQEHMA 490
V+ L + + A
Sbjct: 549 TVIDGLGKAGKTDEA 563
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 86/198 (43%), Gaps = 14/198 (7%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +++ +C R +L EM + GC PI Y+ +L C+ G A +LE++
Sbjct: 162 YFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLH 221
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY- 417
R C D + + C G D A + + G +P + ++ A +KG + R+
Sbjct: 222 ARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWG 281
Query: 418 ---EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
E + V ++ + N L S L +N VL++M+++G P++ +Y
Sbjct: 282 CVQELMEEMVRMACPPNIVTFNTLISYLC----RNGLFERVHEVLAQMVEHGCTPDIRMY 337
Query: 475 RRVLK------HLHTSHQ 486
++ HL +H+
Sbjct: 338 ATIIDGICKEGHLEVAHE 355
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 99/208 (47%), Gaps = 8/208 (3%)
Query: 280 GLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
GL + A +++K + + YN +I +C + + G LL +M+ GC+P +TY
Sbjct: 321 GLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTY 380
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N +L LC Q DA EL++ M C PD +T+ I + C+ G A F QM
Sbjct: 381 NTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPD 440
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKS-SSNMLYSLLASLHDKNNNPV 453
+G P T++ I G + + A + + + +K + + +Y LLA + ++
Sbjct: 441 KGCTPNSITYSTIISGLAKATKLDQALE--LFNEMGHKGFNPDKIYQLLAECLNDDDTIE 498
Query: 454 MAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A + ++ +G+ P+ +Y +L L
Sbjct: 499 EAIQTVRKLQDSGISPHTVLYNAILLGL 526
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 81/184 (44%), Gaps = 2/184 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+L+ MC D +LL + GC+P T+ YN VL LC + DA EL+ EML
Sbjct: 240 YNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEML 299
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
NC P+ T+ + I CR G A +M K G + T+ A I G R
Sbjct: 300 RENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIING-LCEQRNV 358
Query: 419 DAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
D ++ Y +++ Y+ L V A+ ++ M +NG P+ + +
Sbjct: 359 DGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTL 418
Query: 478 LKHL 481
+ L
Sbjct: 419 IGFL 422
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 96/246 (39%), Gaps = 2/246 (0%)
Query: 256 VLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIK--KTERKVSYYNILIKEMCRRCDFK 313
V+ G + V AL + + G A+ V+ + YN LI +C R +
Sbjct: 125 VVGACGPAATVVAYGALTDGYCRAGRLGDARRVVGGMPVQPNAYTYNPLIHTLCERGQVR 184
Query: 314 GPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFI 373
+L +M GC P +TYN +L CK A EL++ M C P+ +TY + +
Sbjct: 185 DALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLM 244
Query: 374 VYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKS 433
C G D A + G +P + +KG R+ DA + V +
Sbjct: 245 DGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCP 304
Query: 434 SSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
+ ++++ + A +L +M K+G N+ Y ++ L A L
Sbjct: 305 PNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGL 364
Query: 494 SSRYSS 499
S+ S
Sbjct: 365 LSKMKS 370
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 77/183 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++K +C + +L+ EM + C P T+N V+ LC+ G A +LLE+M
Sbjct: 275 YNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMS 334
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C + +TY I C D A ++M G +P + T+ +KG ++
Sbjct: 335 KHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWV 394
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA + + N+ ++ L + V A V +M G PN Y ++
Sbjct: 395 DAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTII 454
Query: 479 KHL 481
L
Sbjct: 455 SGL 457
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 88/209 (42%), Gaps = 8/209 (3%)
Query: 280 GLYEMAKYVIKKTER--KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYV 337
G + A +++ + R + N L++++CRR P D + G + Y +
Sbjct: 85 GDLDAALRLVESSPRPPDAALANRLVRDLCRR---GRPDDAERVVGACGPAATVVAYGAL 141
Query: 338 LGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
C+ G+ DA ++ G P+A TY I C G+ A + + M+ RG
Sbjct: 142 TDGYCRAGRLGDARRVVG---GMPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGC 198
Query: 398 QPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKN 457
P + T+ ++ Y A + + L + + +N+ Y++L + A
Sbjct: 199 APDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALE 258
Query: 458 VLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
+L + +G +P+ Y VLK L ++ +
Sbjct: 259 LLRNLPSHGCKPSTVNYNTVLKGLCSAER 287
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFI 373
+++ G P T+ YN +L LC+NG+ A +++ M+ C PD +TY I I
Sbjct: 506 KLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILI 558
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 54/146 (36%), Gaps = 34/146 (23%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N LI +C++ ++ +M GC P ++TY+ ++ L K + A EL EM
Sbjct: 415 FNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMG 474
Query: 359 GRNCHPDAI----------------------------------TYEIFIVYSCRVGKFDV 384
+ +PD I Y ++ CR GK +
Sbjct: 475 HKGFNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEF 534
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKG 410
A + MV G P T+ I+G
Sbjct: 535 AIDIMAYMVSSGCMPDDLTYVILIEG 560
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 91/188 (48%), Gaps = 8/188 (4%)
Query: 295 KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
KV YYNILI + C+ + + + E+R+ G P T+++N ++ LCK+ + L
Sbjct: 222 KVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLK 281
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
+ M +PD TY + I C+ G+ DVA F++M +RGL+P T A I G
Sbjct: 282 KTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRS 341
Query: 415 YRYEDA----YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
R + A ++ + + N L + L + D N A+ ++ EM G++P+
Sbjct: 342 RRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNK----ARKLVDEMRMVGMKPD 397
Query: 471 VSVYRRVL 478
Y ++
Sbjct: 398 KITYTTLI 405
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 78/195 (40%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ LI CR + +M +G +P + YN +L LCK G A +L++EM
Sbjct: 331 FTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMR 390
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD ITY I C+ G + A M + G+ A I G+ R
Sbjct: 391 MVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVR 450
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA + + + + Y+++ + K N M +L EM NG +P V Y ++
Sbjct: 451 DAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLM 510
Query: 479 KHLHTSHQEHMAKCL 493
L Q A L
Sbjct: 511 NGLCKQGQMKNANML 525
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 80/166 (48%), Gaps = 7/166 (4%)
Query: 247 KKGIWRVVEVLNQVGGSCLVSGV-RALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKE 305
+KG+ VL+ V + L+SG R + L EM + +K + + Y ++I
Sbjct: 421 RKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDD---ATYTMVIDG 477
Query: 306 MCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPD 365
C++ + K LL EM+ G +P +TYN ++ LCK GQ +A LLE ML PD
Sbjct: 478 YCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPD 537
Query: 366 AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
ITY I + C+ GK + N+ +GL A + + + Y
Sbjct: 538 DITYNILLEGHCKNGKAEDLLKLRNE---KGLIVDYAYYTSLVSEY 580
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 81/183 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ L EM+Q G P +T+ ++ C++ + A
Sbjct: 293 VFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYH 352
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML PD + Y + C+VG + A ++M G++P T+ I GY
Sbjct: 353 QMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEG 412
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A + ++ N+ ++ L S ++ A+ L EM++ G++P+ + Y
Sbjct: 413 DLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYT 472
Query: 476 RVL 478
V+
Sbjct: 473 MVI 475
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 52/124 (41%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ LI CR + L EM + G +P TY V+ CK G +LL+EM
Sbjct: 436 FTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQ 495
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P ITY + + C+ G+ A M+ G+ P T+ ++G+ + E
Sbjct: 496 INGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAE 555
Query: 419 DAYK 422
D K
Sbjct: 556 DLLK 559
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 55/141 (39%), Gaps = 10/141 (7%)
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
E+L P Y I I C+ G A FN++ KRGL+P + I G
Sbjct: 213 EILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSR 272
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY- 474
++ ++ + YS+L K +A+ + EM + GLRPN +
Sbjct: 273 NLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFT 332
Query: 475 ---------RRVLKHLHTSHQ 486
RR+ ++T HQ
Sbjct: 333 ALIDGQCRSRRIDSAMNTYHQ 353
>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
Length = 722
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 90/190 (47%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNILI +C+ + +DL ++M G +P +TY ++ C+ G +A + ++M+
Sbjct: 521 YNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMI 580
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P A+TY +FI CR G A+ +F +M++ G++P T+ I R +
Sbjct: 581 SDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQ 640
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
AY++ ++ + Y+LL + K N A EM +NG+ P+ ++ +
Sbjct: 641 LAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALF 700
Query: 479 KHLHTSHQEH 488
K H H
Sbjct: 701 KGFDEGHMNH 710
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 144/337 (42%), Gaps = 18/337 (5%)
Query: 155 SVSLSNASVIEILRVLNSEKVSALCFLKYMREIMPEFYKNSDICSLVIDNCGRLDDYETM 214
S+ N + L+ ++KV+ L LK M N ++VI R D E
Sbjct: 236 SIVTYNTLLDSFLKEGRNDKVAML--LKEMETRGSGCLPNDVTHNVVITGLARKGDLEEA 293
Query: 215 RQLLNDFNVYQVCLNEKA--FGFLPVLIS--SKALTKKGIWRVVEVLNQVGGSCLVSGVR 270
+++ L++KA F + P++ +K KK +E+ N+ G V
Sbjct: 294 AEMVEGMR-----LSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENE-GIMPTVVTYN 347
Query: 271 ALIEMFSVLGLYEMA--KYVIKKT---ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
A+I G E A K+V + + V YN L+ C+ K L ++R
Sbjct: 348 AMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHA 407
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P LTYN ++ C+ G +A L EEM+ + C PD TY I + S +A
Sbjct: 408 GLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMA 467
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
FF++M+ +GLQP + I+ A++ + + SS + Y++L
Sbjct: 468 REFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDG 527
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLH 482
K N AK++ +M+ NGL+P+ Y L H H
Sbjct: 528 LCKTGNLNDAKDLQMKMVHNGLQPDCITY-TCLIHAH 563
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 145/395 (36%), Gaps = 70/395 (17%)
Query: 136 IIELLRSGDSETESKLLSMSVSLSNASVIEILRVLNSEKVSALCFLKYMREIMPE-FYKN 194
I L R GD E A ++E +R+ S+K S+ + + ++ + F K
Sbjct: 281 ITGLARKGDLE------------EAAEMVEGMRL--SKKASSFTYNPLITGLLAKGFVKK 326
Query: 195 SDICSLVIDNCGRLDDYETMRQLLNDF------NVYQVCLNE-KAFGFLPVLIS------ 241
+D L ++N G + T +++ QV E +A G P +I+
Sbjct: 327 ADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLN 386
Query: 242 --SKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK---- 295
KA + K + L G + V LI+ + LG E A+ + ++ +
Sbjct: 387 GYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLP 446
Query: 296 -VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPI------------------------ 330
V Y IL+K C R+ EM G +P
Sbjct: 447 DVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLR 506
Query: 331 -----------TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
T+TYN ++ LCK G DA +L +M+ PD ITY I C
Sbjct: 507 EVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCER 566
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
G A FF M+ GL P T+ FI Y AY + ++ + + Y
Sbjct: 567 GLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITY 626
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
++L + +A EM++ GL PN Y
Sbjct: 627 NVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTY 661
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 71/193 (36%), Gaps = 35/193 (18%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI + + K DL +EM G P +TYN ++ L ++GQ A EM
Sbjct: 311 YNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMR 370
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD ITY + C+ G A F + GL P + T+ I GY E
Sbjct: 371 AMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLE 430
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + + EM++ G P+V Y ++
Sbjct: 431 EA-----------------------------------RRLKEEMVEQGCLPDVCTYTILM 455
Query: 479 KHLHTSHQEHMAK 491
K H + MA+
Sbjct: 456 KGSHNACSLAMAR 468
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM--LGRNCHPDAITYEIFIVYSC 377
EM Q+G EP +TYN +L K G++ LL+EM G C P+ +T+ + I
Sbjct: 226 AEMLQLGIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLA 285
Query: 378 RVGKFDVAFNFFNQM 392
R G + A M
Sbjct: 286 RKGDLEEAAEMVEGM 300
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 64/173 (36%), Gaps = 3/173 (1%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
EM G P N VL VL + D C + EML P +TY + + G
Sbjct: 192 EMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEG 251
Query: 381 KFDVAFNFFNQMVKRGLQ--PRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML 438
+ D +M RG P TH I G E+A + V K+SS
Sbjct: 252 RNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKASSFTY 311
Query: 439 YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
L+ L K A ++ EM G+ P V Y ++ L S Q A+
Sbjct: 312 NPLITGLLAKGFVK-KADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQ 363
>gi|224128340|ref|XP_002320305.1| predicted protein [Populus trichocarpa]
gi|222861078|gb|EEE98620.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 150/356 (42%), Gaps = 7/356 (1%)
Query: 128 ATPKQVSEIIELLRSGDSETESKLLSMSVSLSNASVIEILRVLNSEKVSALCFLKYMREI 187
A +V ++I+ L + D E+ L ++LS+ VIE+L + A F + E
Sbjct: 74 AEVHKVCKVIDELFALDHNMEAVLDECGINLSHDLVIEVLERFRHARKPAFRFFCWAAE- 132
Query: 188 MPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTK 247
P F +S ++ + +ETM +L + ++ L F ++ K
Sbjct: 133 KPGFVHDSRTYHSMMIILAKARQFETMMSMLEEMGEKRL-LTLDTFSIAMRAFAAAKERK 191
Query: 248 KGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVS----YYNILI 303
K + + E++ V + AL++ L + A+ + K E + + Y +L+
Sbjct: 192 KAV-GIFELMKNHKYRVGVETINALLDSLGRAKLGKEAQALFGKLEGRFTPNLRTYTVLL 250
Query: 304 KEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH 363
CR + + EM G +P +T+N +L L ++ + +DA + E M +
Sbjct: 251 NGWCRVKNLMEAGRIWNEMLDEGFKPDIVTHNIMLEGLLRSKKRSDAIKFFEVMKAKGPS 310
Query: 364 PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY 423
PD +Y I I C+ K A +F +MV G P A + + GY R + Y+
Sbjct: 311 PDVRSYTILIRDLCKQTKMKEAVGYFYEMVDSGCHPDAAVYTCLMTGYGNHKRMDMVYEL 370
Query: 424 VVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
+ +K Y+ L L P A + +M++NG+ P++ Y ++K
Sbjct: 371 LKEMKEKGCPPDGKTYNALIKLMTSQRMPDDAVRIYKKMIQNGIEPSIHSYNMIMK 426
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 71/150 (47%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
+LL EM++ GC P TYN ++ ++ DA + ++M+ P +Y + +
Sbjct: 369 ELLKEMKEKGCPPDGKTYNALIKLMTSQRMPDDAVRIYKKMIQNGIEPSIHSYNMIMKSY 428
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
R+ +++ +++M K+G P ++ FI G R E+A KY+ +K +
Sbjct: 429 FRIRNYEMGHAVWDEMSKKGFCPDDNSYTVFIGGLISQGRSEEACKYLEEMIEKGMKAPQ 488
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNG 466
+ Y+ A+ + P + + + +M +G
Sbjct: 489 LDYNKFAADFSRAGKPDILEELAQKMKFSG 518
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 5/119 (4%)
Query: 271 ALIEMFSVLGLYEMAKYVIKK-----TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI++ + + + A + KK E + YN+++K R +++ + EM +
Sbjct: 388 ALIKLMTSQRMPDDAVRIYKKMIQNGIEPSIHSYNMIMKSYFRIRNYEMGHAVWDEMSKK 447
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
G P +Y +G L G+ +AC+ LEEM+ + + Y F R GK D+
Sbjct: 448 GFCPDDNSYTVFIGGLISQGRSEEACKYLEEMIEKGMKAPQLDYNKFAADFSRAGKPDI 506
>gi|46091161|dbj|BAD13709.1| PPR protein [Oryza sativa Indica Group]
Length = 332
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 88/192 (45%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K+ V YN +I +C+ ++L M + G P +TYN ++ C +GQ +
Sbjct: 41 KRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKE 100
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A L++M PD +TY + Y C+ G+ A F+ M KRGL+P + T+ ++
Sbjct: 101 AIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQ 160
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
GY + + + L ++ ++S+L + K A V S+M + GL P
Sbjct: 161 GYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNP 220
Query: 470 NVSVYRRVLKHL 481
N Y V+ L
Sbjct: 221 NAVTYGTVIDVL 232
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 65/157 (41%)
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
C P ++Y+ V+ K G EML + P+ +TY I C+ D A
Sbjct: 8 CPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAM 67
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
MVK G+ P T+ + + G+ + ++A ++ + Y+ L
Sbjct: 68 EVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYL 127
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHT 483
KN A+ + M K GL+P+++ Y +L+ T
Sbjct: 128 CKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYAT 164
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 81/181 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
++ Y L++ + LL M + G P ++ ++ K + +A +
Sbjct: 152 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFS 211
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M + +P+A+TY I C+ G+ + A +F QM+ GL+P + + I IF
Sbjct: 212 KMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFD 271
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
++E A + + D+ S + ++ + H K + + + M++ G++P++
Sbjct: 272 KWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESVKLFDLMVRIGVKPDIITLG 331
Query: 476 R 476
R
Sbjct: 332 R 332
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 82/207 (39%), Gaps = 41/207 (19%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++ C K L +MR G EP +TYN ++ LCKNG+ +A ++ + M
Sbjct: 85 YNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMT 144
Query: 359 GRNCHPDAITYE--------------------------------IFIVYSC---RVGKFD 383
R PD TY +F + C + K +
Sbjct: 145 KRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVE 204
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY-SLL 442
A F++M ++GL P T+ I R EDA Y D+ +++Y SL+
Sbjct: 205 EAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLI 264
Query: 443 ASL--HDKNNNPVMAKNVLSEMMKNGL 467
SL DK A+ + EM+ G+
Sbjct: 265 HSLCIFDKWEK---AEELFLEMLDRGI 288
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/123 (20%), Positives = 52/123 (42%)
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
G +C PD ++Y I + G D ++ +N+M+ + + P + T+ + I +
Sbjct: 5 GGDCPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVD 64
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + + M Y+ + + P A L +M +G+ P+V Y ++
Sbjct: 65 KAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLM 124
Query: 479 KHL 481
+L
Sbjct: 125 DYL 127
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 118/260 (45%), Gaps = 13/260 (5%)
Query: 233 FGFLPVLISSKAL-----TKKGIWRVVEVLNQV---GGSCLVSGVRALIEMFSVLGLYEM 284
G P L++ L +K I V++ +++ G V +I +G M
Sbjct: 4 LGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTM 63
Query: 285 AKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
A ++KK E K V YN +I +C+ D EM + G P TY+ +L
Sbjct: 64 ALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILH 123
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
C G+ +A L ++M+ RN P+ +T+ I I C+ A+ F M ++GL+P
Sbjct: 124 GFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEP 183
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
+ T+ A + GY + ++A K + K + + Y++L + H K+ AK +L
Sbjct: 184 DVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLL 243
Query: 460 SEMMKNGLRPNVSVYRRVLK 479
+EM L P++ Y +++
Sbjct: 244 AEMSHKSLTPDIFTYSTLMR 263
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K E V YN L+ C R + L M + GC P +YN ++ CK+G+ +
Sbjct: 179 KGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDE 238
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A LL EM ++ PD TY + C+VG+ A +M GL P L T++ +
Sbjct: 239 AKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLD 298
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
G ++A++ + + + +Y++L A+ + S + G++P
Sbjct: 299 GLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQP 358
Query: 470 NVSVYRRVLKHL 481
V Y ++ L
Sbjct: 359 TVVTYTVMISGL 370
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 87/188 (46%), Gaps = 1/188 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ L++ C+ + ++LL EM G P +TY+ VL LCK+G +A ELL+ M
Sbjct: 258 YSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQ 317
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ Y I I C GK + A F+ + +G+QP + T+ I G
Sbjct: 318 ESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSN 377
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + A ++ Y+++ +N + A ++ EM+ G + S + R+L
Sbjct: 378 EACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTF-RML 436
Query: 479 KHLHTSHQ 486
L +S +
Sbjct: 437 SDLESSDE 444
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 93/198 (46%), Gaps = 2/198 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ ILI +C++ + M + G EP TYN ++ C Q +A +L M
Sbjct: 153 FTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMD 212
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C P+ +Y I I C+ G+ D A +M + L P + T++ ++G+ R +
Sbjct: 213 RKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQ 272
Query: 419 DAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+A + ++ Y N++ YS++ K+ + A +L M ++ + PN+ +Y +
Sbjct: 273 EAQE-LLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTIL 331
Query: 478 LKHLHTSHQEHMAKCLSS 495
++ + T + A+ L S
Sbjct: 332 IEGMCTFGKLEAARELFS 349
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 78/192 (40%), Gaps = 35/192 (18%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M ++G +P +T+N +L LC + DA +L +EM+ PD ITY I C++G
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60
Query: 382 FDVAF-----------------------------------NFFNQMVKRGLQPRLATHAA 406
+A +FF++MVK G+ P + T+++
Sbjct: 61 TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120
Query: 407 FIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNG 466
+ G+ R +A ++ + + +++L K A V M + G
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180
Query: 467 LRPNVSVYRRVL 478
L P+V Y ++
Sbjct: 181 LEPDVYTYNALV 192
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
+ + V K V +NILI +CR+ D+L +M GC P +L+YN +L CK
Sbjct: 109 LTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCK 168
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
+ A + LE M+ R C+PD +TY + C+ GK D A NQ+ +G P L T
Sbjct: 169 EKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLIT 228
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
+ I G + + A + + K + YS L + + A ++
Sbjct: 229 YNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVE 288
Query: 464 KNGLRPNVSVYRRVLKHLHTSHQEHMA 490
G++PN Y ++ L + Q A
Sbjct: 289 GFGVKPNAFTYNSIMFGLCKAQQTDRA 315
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%)
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
C P +TY ++ C A +LL+EM R C PD +TY + + C+ G+ D A
Sbjct: 12 CYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAI 71
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
F N M G QP + TH ++ R+ DA K + K S S + +++L +
Sbjct: 72 KFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFL 131
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ A ++L +M +G PN Y +L
Sbjct: 132 CRKGLLGRAIDILEKMPTHGCTPNSLSYNPLL 163
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 96/222 (43%), Gaps = 8/222 (3%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+ +C SGV +++ +G + + V YN+L+ MC+ L
Sbjct: 23 IEATCAESGVGQAMKLLDEMG--------SRGCKPDVVTYNVLVNGMCKEGRLDEAIKFL 74
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
M G +P +T+N +L +C G+ DA +LL EM+ + C P +T+ I I + CR
Sbjct: 75 NSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRK 134
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
G A + +M G P ++ + G+ + + A +Y+ + + + Y
Sbjct: 135 GLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTY 194
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + + K+ A +L+++ G P + Y V+ L
Sbjct: 195 NTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGL 236
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 83/181 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++ +C+ +LL ++ GC P+ +TYN V+ L K G+ A ELL EM
Sbjct: 194 YNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMR 253
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
G+ PD ITY I R GK + A FF+ + G++P T+ + + G + +
Sbjct: 254 GKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTD 313
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A ++ K + + Y++L A +L+E+ G+ S + V+
Sbjct: 314 RAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVVKKSSAEQVVV 373
Query: 479 K 479
+
Sbjct: 374 R 374
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y ILI+ C LL EM GC+P +TYN ++ +CK G+ +A + L
Sbjct: 16 VITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFLN 75
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
M P+ IT+ I + C G++ A +MV++G P + T I
Sbjct: 76 SMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILI 128
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Query: 352 ELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
E+L+ L + C+PD ITY I I +C A ++M RG +P + T+ + G
Sbjct: 2 EVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGM 61
Query: 412 FIFYRYEDAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
R ++A K++ S Y S N++ ++++ + A+ +L+EM++ G P+
Sbjct: 62 CKEGRLDEAIKFLN-SMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPS 120
Query: 471 VSVYRRVLKHL 481
V + ++ L
Sbjct: 121 VVTFNILINFL 131
>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
Length = 933
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 5/219 (2%)
Query: 280 GLYEMAKYVIKK-TERKVSYYNILIKEMCRRCDFKGPRDLLVE----MRQVGCEPITLTY 334
G E AKY++ + S ++ + + + C D++++ M G Y
Sbjct: 638 GAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVY 697
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N +L VLC +G A +LEEMLG PD IT+ I+ C+ D AF + QM+
Sbjct: 698 NTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLH 757
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM 454
+ + P +AT + G R +A ++ +N+ Y +LA+ H K +N V
Sbjct: 758 QNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVE 817
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
A + EM+ G P VS Y ++ + AK L
Sbjct: 818 AMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKEL 856
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 11/196 (5%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+ I +C FK + L EMR +G +P TYN ++ C+ G+ A A +LL EM
Sbjct: 557 YNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMK 616
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+ ITY + G + A N+MV G P TH ++ R +
Sbjct: 617 MSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLD 676
Query: 419 DAYKYVVLSADKYKSSSNM-----LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
V+L ++ ++ + +Y+ L + + A VL EM+ +G+ P+
Sbjct: 677 -----VILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTIT 731
Query: 474 YRR-VLKHLHTSHQEH 488
+ +L H +SH ++
Sbjct: 732 FNALILGHCKSSHLDN 747
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 72/190 (37%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN L+ CR R +L M++ G +P TY + C+ +A +L E
Sbjct: 204 VVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYE 263
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+ D +T + CR G+F A+ F +M K G P T+ I
Sbjct: 264 GMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAG 323
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R ++ + + + Y+ L K K+ L + + L PN Y
Sbjct: 324 RGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYT 383
Query: 476 RVLKHLHTSH 485
++ L +H
Sbjct: 384 VLIDALCKAH 393
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 110/252 (43%), Gaps = 8/252 (3%)
Query: 228 LNEKAFGFLPVLIS-SKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAK 286
L+ FG P +S + +T +G+ ++ VG + LV+G ++ + G+ +M K
Sbjct: 177 LDIAGFGDTPAALSVADRMTAQGL-----PMDVVGYNTLVAGFCRAGQVDAARGVLDMMK 231
Query: 287 YVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQ 346
+ V+ Y I CR + DL M + G +T + ++ LC++G+
Sbjct: 232 EA--GVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGR 289
Query: 347 DADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAA 406
++A L EM P+ +TY I + G+ + +MV RG+ L T+ A
Sbjct: 290 FSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTA 349
Query: 407 FIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNG 466
+ + ++ + + S + + Y++L K +N A+ VL EM +
Sbjct: 350 LMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKS 409
Query: 467 LRPNVSVYRRVL 478
+ PNV + V+
Sbjct: 410 ISPNVVTFSSVI 421
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 4/150 (2%)
Query: 332 LTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQ 391
+ Y ++ L K G A + +E++ RN PDA+ Y +FI C +GKF A +F +
Sbjct: 520 VNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTE 579
Query: 392 MVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKS-SSNML-YSLLASLHDKN 449
M GL+P +T+ I + + E A +L K S N++ Y+ L +
Sbjct: 580 MRNMGLKPDQSTYNTMIVSH--CRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGT 637
Query: 450 NNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
AK +L+EM+ G P+ +RRVL+
Sbjct: 638 GAVEKAKYLLNEMVSAGFSPSSLTHRRVLQ 667
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 77/186 (41%), Gaps = 6/186 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI + + D E+ P + YN + LC G+ +A L EM
Sbjct: 522 YTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMR 581
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD TY IV CR G+ A ++M ++P L T+ + G F E
Sbjct: 582 NMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVE 641
Query: 419 DAYKYVV---LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
A KY++ +SA SS L A + + ++ ++ MM GL +++VY
Sbjct: 642 KA-KYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVIL--DIHEWMMNAGLHADITVYN 698
Query: 476 RVLKHL 481
+L+ L
Sbjct: 699 TLLQVL 704
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 16/179 (8%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
L+ +CR F L EM +VG P +TY ++ L K G+ + LL EM+ R
Sbjct: 280 LVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRG 339
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
D +TY + + + GK D + + L P T+ I + ++A
Sbjct: 340 VVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEA- 398
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKH 480
+ V+L ++ S N+ V +V++ +K GL + Y+R++K
Sbjct: 399 EQVLLEMEEKSISPNV---------------VTFSSVINGFVKRGLLDKATEYKRMMKE 442
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
+L+EM + G EP LTY+ + K +A L EM+G+ P TY I
Sbjct: 786 VLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFT 845
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
+ G A F M KRG+ P T+ + G+
Sbjct: 846 KAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGW 879
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 85/205 (41%), Gaps = 7/205 (3%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L EM +K + S YN +I CR+ + LL EM+ +P +TYN ++
Sbjct: 577 LTEMRNMGLKPDQ---STYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAG 633
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
L G A LL EM+ P ++T+ + + + DV + M+ GL
Sbjct: 634 LFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHAD 693
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSA--DKYKSSSNMLYSLLASLHDKNNNPVMAKNV 458
+ + ++ + Y VVL + + ++ L H K+++ A
Sbjct: 694 ITVYNTLLQ--VLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFAT 751
Query: 459 LSEMMKNGLRPNVSVYRRVLKHLHT 483
++M+ + PN++ + +L L +
Sbjct: 752 YAQMLHQNISPNIATFNTLLGGLES 776
>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
Length = 590
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 142/321 (44%), Gaps = 8/321 (2%)
Query: 166 ILRVLNSEKVSALCFLKYMREIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQ 225
+L L +++ + + Y + + N I +++I C + D E QLLN+
Sbjct: 168 LLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRF 227
Query: 226 VCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMA 285
+ + + L L K + + + + + + + G S + +LI F G A
Sbjct: 228 IFPDLFTYNTLISLYCKKGMHYEAL-GIQDRMERGGVSPDIVTYNSLIYGFCREGRMREA 286
Query: 286 KYVIKK----TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+ ++ T V+Y LI CR D + L M G P +TYN +L L
Sbjct: 287 LRLFREINGATPNHVTY-TTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKL 345
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
C+ G+ DA LL EM R PD +T I C++G A +M++ GL+P
Sbjct: 346 CEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQ 405
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA-SLHDKNNNPVMAKNVLS 460
T A I G+ + + A +++ D S S YS L S +D++N + + +
Sbjct: 406 FTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIR-LPD 464
Query: 461 EMMKNGLRPNVSVYRRVLKHL 481
E+ + GL ++SVYR +++ L
Sbjct: 465 ELSRKGLFVDISVYRALIRRL 485
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 126/290 (43%), Gaps = 29/290 (10%)
Query: 222 NVYQVCLNEKAFGFLP------VLISS--KALTKKGIWRVVEVLNQVGGSCLVSGVRALI 273
+ QV + + GF P VL++S KA +W+V + + +VG V I
Sbjct: 145 DAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVG-------VVPNI 197
Query: 274 EMFSVL-------GLYEMAKYVIKKTERKVSY-----YNILIKEMCRRCDFKGPRDLLVE 321
+F+VL G E A+ ++ + E + + YN LI C++ +
Sbjct: 198 HIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDR 257
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M + G P +TYN ++ C+ G+ +A L E+ G P+ +TY I CRV
Sbjct: 258 MERGGVSPDIVTYNSLIYGFCREGRMREALRLFREINGAT--PNHVTYTTLIDGYCRVND 315
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
+ A M GL P + T+ + ++ + +DA + + +++ N+ +
Sbjct: 316 LEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNT 375
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
L + + K + A V +M++ GL+P+ ++ ++ H+ AK
Sbjct: 376 LINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAK 425
>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Vitis vinifera]
Length = 590
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 142/321 (44%), Gaps = 8/321 (2%)
Query: 166 ILRVLNSEKVSALCFLKYMREIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQ 225
+L L +++ + + Y + + N I +++I C + D E QLLN+
Sbjct: 168 LLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRF 227
Query: 226 VCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMA 285
+ + + L L K + + + + + + + G S + +LI F G A
Sbjct: 228 IFPDLFTYNTLISLYCKKGMHYEAL-GIQDRMERGGVSPDIVTYNSLIYGFCREGRMREA 286
Query: 286 KYVIKK----TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+ ++ T V+Y LI CR D + L M G P +TYN +L L
Sbjct: 287 LRLFREINGATPNHVTY-TTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKL 345
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
C+ G+ DA LL EM R PD +T I C++G A +M++ GL+P
Sbjct: 346 CEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQ 405
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA-SLHDKNNNPVMAKNVLS 460
T A I G+ + + A +++ D S S YS L S +D++N + + +
Sbjct: 406 FTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIR-LPD 464
Query: 461 EMMKNGLRPNVSVYRRVLKHL 481
E+ + GL ++SVYR +++ L
Sbjct: 465 ELSRKGLFVDISVYRALIRRL 485
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 126/290 (43%), Gaps = 29/290 (10%)
Query: 222 NVYQVCLNEKAFGFLP------VLISS--KALTKKGIWRVVEVLNQVGGSCLVSGVRALI 273
+ QV + + GF P VL++S KA +W+V + + +VG V I
Sbjct: 145 DAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVG-------VVPNI 197
Query: 274 EMFSVL-------GLYEMAKYVIKKTERKVSY-----YNILIKEMCRRCDFKGPRDLLVE 321
+F+VL G E A+ ++ + E + + YN LI C++ +
Sbjct: 198 HIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDR 257
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M + G P +TYN ++ C+ G+ +A L E+ G P+ +TY I CRV
Sbjct: 258 MERGGVSPDIVTYNSLIYGFCREGRMREALRLFREINGAT--PNHVTYTTLIDGYCRVND 315
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
+ A M GL P + T+ + ++ + +DA + + +++ N+ +
Sbjct: 316 LEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNT 375
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
L + + K + A V +M++ GL+P+ ++ ++ H+ AK
Sbjct: 376 LINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAK 425
>gi|357480939|ref|XP_003610755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512090|gb|AES93713.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 596
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 156/336 (46%), Gaps = 28/336 (8%)
Query: 158 LSNASVIEILRVLNSEKVSALCFLKYMREIMPEFYKNSDICSLVIDNCGRLDDYETMRQL 217
+SN+ V+++L+ ++ V+A F + ++ P + + ++ +L++D G+ +++ M +L
Sbjct: 175 VSNSLVMQVLKRFGNDWVAAYGFFIWAKKQTP-YVHSPEVYNLMVDILGKAKEFDLMWKL 233
Query: 218 LNDFNVYQ--VCLN---------EKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLV 266
+ + + VCL+ KA + + + + K G+ + LN++
Sbjct: 234 VKEMKRIEGYVCLDTMSKVMRRFAKAQRHEDAVEAFRGMGKYGVEKDTAALNKL------ 287
Query: 267 SGVRALIEMFSVLGLYEMAKYVIKKTERKVSY----YNILIKEMCRRCDFKGPRDLLVEM 322
+ AL++ S+ E+A V+ + + V +NILI C+ +F+ R ++ E
Sbjct: 288 --LDALVKGQSI----EIAHNVLDEFKSSVPLSSPSFNILINGWCKVRNFEKARKVMEER 341
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
++ G EP TYN + C + E+LEEM G C P+A+TY I ++ + G+
Sbjct: 342 KEHGFEPDVFTYNNFIESYCHDKDFRKVDEVLEEMRGNGCPPNAVTYTILLLGYGKAGQL 401
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
A + +M K G+ P +++ + R +DA + + + Y+ +
Sbjct: 402 SKALEEYERMKKDGIVPDTPFYSSLMYILGKAGRLKDACEVFDDMPKQGVVRDVVTYNTM 461
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
S ++ A +L EM + +P++ Y +L
Sbjct: 462 ISTACAHSKEETALRLLKEMEETSCKPDLQTYHPLL 497
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 48/110 (43%)
Query: 294 RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACEL 353
R V YN +I C + LL EM + C+P TY+ +L + CK + L
Sbjct: 453 RDVVTYNTMISTACAHSKEETALRLLKEMEETSCKPDLQTYHPLLKMCCKKKRMKVLKFL 512
Query: 354 LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
L+ M + PD TY + + GK A FF +MV +G P T
Sbjct: 513 LDHMFKHDLCPDRGTYTLLVQSLSNSGKLVEACTFFEEMVSKGFTPMETT 562
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 95/225 (42%), Gaps = 24/225 (10%)
Query: 199 SLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTK-----KGIWRV 253
+++I+ ++ ++E R+++ + K GF P + + + K +V
Sbjct: 319 NILINGWCKVRNFEKARKVMEE---------RKEHGFEPDVFTYNNFIESYCHDKDFRKV 369
Query: 254 VEVLNQV-GGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTER--------KVSYYNILIK 304
EVL ++ G C + V I + +++K +++ ER +Y+ L+
Sbjct: 370 DEVLEEMRGNGCPPNAVTYTILLLGYGKAGQLSK-ALEEYERMKKDGIVPDTPFYSSLMY 428
Query: 305 EMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHP 364
+ + K ++ +M + G +TYN ++ C + ++ A LL+EM +C P
Sbjct: 429 ILGKAGRLKDACEVFDDMPKQGVVRDVVTYNTMISTACAHSKEETALRLLKEMEETSCKP 488
Query: 365 DAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
D TY + C+ + V + M K L P T+ ++
Sbjct: 489 DLQTYHPLLKMCCKKKRMKVLKFLLDHMFKHDLCPDRGTYTLLVQ 533
>gi|297734265|emb|CBI15512.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 110/259 (42%), Gaps = 13/259 (5%)
Query: 234 GFLPVLISSKALTKKGI--------WRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMA 285
GF+P +I+S L + W V E + + G + + L + G
Sbjct: 218 GFVPTVITSNYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKV 277
Query: 286 KYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
++K E + + YN LI CR+ L M + G P ++Y ++
Sbjct: 278 NKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNG 337
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
LCK G+ +A +L M+ R PD +TY I C+ GK + + + M+ G+ P
Sbjct: 338 LCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPD 397
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
T ++GY ++ A VV S S +YS L + N P AKN+L
Sbjct: 398 SFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLE 457
Query: 461 EMMKNGLRPNVSVYRRVLK 479
M K+G +P + +Y ++K
Sbjct: 458 RMSKDGHKPELEIYNELIK 476
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 82/207 (39%), Gaps = 35/207 (16%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG------------------- 339
+++L+K R + M +VG P +T NY+L
Sbjct: 191 FDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVYEEME 250
Query: 340 ----------------VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
VLCK+G + LE+M PD +TY I CR G+ D
Sbjct: 251 RFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLD 310
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
AF + M +RG+ P L ++ A + G R +A++ + S + Y+ L
Sbjct: 311 DAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLI 370
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPN 470
+ K ++++L +M+ NG+ P+
Sbjct: 371 HGYCKEGKMQESRSLLHDMIWNGISPD 397
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 92/231 (39%), Gaps = 5/231 (2%)
Query: 241 SSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLY-EMAKYVIKKTERKVSYY 299
S++L IW + + LV G + S L L E+ ++ + ++ SY
Sbjct: 381 ESRSLLHDMIWNGISP-DSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSY- 438
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
LI +CR ++LL M + G +P YN ++ C+ A+A L EM+
Sbjct: 439 --LIVALCRENRPFAAKNLLERMSKDGHKPELEIYNELIKSFCQCDCIAEALLLKMEMVD 496
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
+ P+ TY I R+ + + +MV G+ P L A GY +
Sbjct: 497 KEIKPNLATYRAVIGCLSRLSRSMEGESLVGEMVASGMLPDLEICRALFYGYCRENDIDK 556
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
A + A +++ ++ L + + + + M+K GL PN
Sbjct: 557 AESLLSFFAKEFQIHDTESFNALIRITSAKGDIARSLEIQDMMLKMGLLPN 607
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y LI +C+ D +LL EM ++G +P TYN ++ LCK+G +A +L+
Sbjct: 899 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 958
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
E + D +TY + C+ G+ D A +M+ +GLQP + T + G+ +
Sbjct: 959 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 1018
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
ED K + K + + ++ L + NN A + +M G+ P+ Y
Sbjct: 1019 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYE 1078
Query: 476 RVLK 479
++K
Sbjct: 1079 NLVK 1082
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 104/244 (42%), Gaps = 4/244 (1%)
Query: 263 SCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSY-YNILIKEMCRRCDFKGPRDLLVE 321
S +V+G E+ V L E+ K +K + SY Y +I +CR C + E
Sbjct: 728 STVVNGYCRFGELDKVWKLIEVMK---RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSE 784
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M + G P T+ Y ++ CK G A + EM R+ PD +TY I C++G
Sbjct: 785 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 844
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
A F++M +GL+P T I GY +DA++ S + + Y+
Sbjct: 845 MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTT 904
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLS 501
L K + A +L EM K GL+PN+ Y ++ L S A L + +
Sbjct: 905 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 964
Query: 502 LGSS 505
L +
Sbjct: 965 LNAD 968
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 75/176 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ C+ + +++L EM G +P +T+N ++ C +G D +LL ML
Sbjct: 972 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 1031
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+A T+ + C A + M RG+ P T+ +KG+ +
Sbjct: 1032 AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMK 1091
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+A+ K S S YS+L K + A+ V +M + GL + ++
Sbjct: 1092 EAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 1147
>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 933
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 5/219 (2%)
Query: 280 GLYEMAKYVIKK-TERKVSYYNILIKEMCRRCDFKGPRDLLVE----MRQVGCEPITLTY 334
G E AKY++ + S ++ + + + C D++++ M G Y
Sbjct: 638 GAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVY 697
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N +L VLC +G A +LEEMLG PD IT+ I+ C+ D AF + QM+
Sbjct: 698 NTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLH 757
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM 454
+ + P +AT + G R +A ++ +N+ Y +LA+ H K +N V
Sbjct: 758 QNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVE 817
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
A + EM+ G P VS Y ++ + AK L
Sbjct: 818 AMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKEL 856
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 11/196 (5%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+ I +C FK + L EMR +G +P TYN ++ C+ G+ A A +LL EM
Sbjct: 557 YNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMK 616
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+ ITY + G + A N+MV G P TH ++ R +
Sbjct: 617 MSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLD 676
Query: 419 DAYKYVVLSADKYKSSSNM-----LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
V+L ++ ++ + +Y+ L + + A VL EM+ +G+ P+
Sbjct: 677 -----VILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTIT 731
Query: 474 YRR-VLKHLHTSHQEH 488
+ +L H +SH ++
Sbjct: 732 FNALILGHCKSSHLDN 747
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 96/245 (39%), Gaps = 4/245 (1%)
Query: 241 SSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYN 300
++ AL +G + L+ +G + L++G + + + L + + + + V YN
Sbjct: 153 AAAALADRG--GGIHALDVIGWNTLIAGYCRVGDTPAALSVAD--RMTAQGLPMDVVGYN 208
Query: 301 ILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGR 360
L+ CR R +L M++ G +P TY + C+ +A +L E M+
Sbjct: 209 TLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRN 268
Query: 361 NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
D +T + CR G+F A+ F +M K G P T+ I R ++
Sbjct: 269 GVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKEL 328
Query: 421 YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKH 480
+ + + Y+ L K K+ L + + L PN Y ++
Sbjct: 329 LSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDA 388
Query: 481 LHTSH 485
L +H
Sbjct: 389 LCKAH 393
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 4/150 (2%)
Query: 332 LTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQ 391
+ Y ++ L K G A + +E++ RN PDA+ Y +FI C +GKF A +F +
Sbjct: 520 VNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTE 579
Query: 392 MVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKS-SSNML-YSLLASLHDKN 449
M GL+P +T+ I + + E A +L K S N++ Y+ L +
Sbjct: 580 MRNMGLKPDQSTYNTMIVSH--CRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGT 637
Query: 450 NNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
AK +L+EM+ G P+ +RRVL+
Sbjct: 638 GAVEKAKYLLNEMVSAGFSPSSLTHRRVLQ 667
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 77/186 (41%), Gaps = 6/186 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI + + D E+ P + YN + LC G+ +A L EM
Sbjct: 522 YTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMR 581
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD TY IV CR G+ A ++M ++P L T+ + G F E
Sbjct: 582 NMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVE 641
Query: 419 DAYKYVV---LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
A KY++ +SA SS L A + + ++ ++ MM GL +++VY
Sbjct: 642 KA-KYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVIL--DIHEWMMNAGLHADITVYN 698
Query: 476 RVLKHL 481
+L+ L
Sbjct: 699 TLLQVL 704
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 16/179 (8%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
L+ +CR F L EM +VG P +TY ++ L K G+ + LL EM+ R
Sbjct: 280 LVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRG 339
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
D +TY + + + GK D + + L P T+ I + ++A
Sbjct: 340 VVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEA- 398
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKH 480
+ V+L ++ S N+ V +V++ +K GL + Y+R++K
Sbjct: 399 EQVLLEMEEKSISPNV---------------VTFSSVINGFVKRGLLDKATEYKRMMKE 442
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
+L+EM + G EP LTY+ + K +A L EM+G+ P TY I
Sbjct: 786 VLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFT 845
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
+ G A F M KRG+ P T+ + G+
Sbjct: 846 KAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGW 879
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 4/113 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNIL+ + D +L EM + G +T N +L LC+NGQ DA L +
Sbjct: 106 YNILLAALS---DHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQ-VDAAAALADRG 161
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
G D I + I CRVG A + ++M +GL + + + G+
Sbjct: 162 GGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGF 214
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 85/205 (41%), Gaps = 7/205 (3%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L EM +K + S YN +I CR+ + LL EM+ +P +TYN ++
Sbjct: 577 LTEMRNMGLKPDQ---STYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAG 633
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
L G A LL EM+ P ++T+ + + + DV + M+ GL
Sbjct: 634 LFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHAD 693
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSA--DKYKSSSNMLYSLLASLHDKNNNPVMAKNV 458
+ + ++ + Y VVL + + ++ L H K+++ A
Sbjct: 694 ITVYNTLLQ--VLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFAT 751
Query: 459 LSEMMKNGLRPNVSVYRRVLKHLHT 483
++M+ + PN++ + +L L +
Sbjct: 752 YAQMLHQNISPNIATFNTLLGGLES 776
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 88/186 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN++I +C+ D + R L V+MR++G P +TYN ++ K G + L
Sbjct: 230 VFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFN 289
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM C PD ITY I C+ K AF +F++M GL+P + T++ I +
Sbjct: 290 EMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEG 349
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ A K + + Y+ L + K N A +L++M++ G++ N+ Y
Sbjct: 350 MMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYT 409
Query: 476 RVLKHL 481
+L L
Sbjct: 410 ALLDGL 415
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 74/175 (42%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ LI C+ +G LL +MR+ G P TY ++ CK G +A +LL
Sbjct: 335 VVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLN 394
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML + +TY + C+ G+ A F M+K G+ P + A + GY
Sbjct: 395 DMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAE 454
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
R EDA K + + +LY + H K +L EM G+ N
Sbjct: 455 RMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISAN 509
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 89/221 (40%), Gaps = 8/221 (3%)
Query: 266 VSGVRALIEMFSV---LGLYEMAKYVIKK-----TERKVSYYNILIKEMCRRCDFKGPRD 317
VSG +FSV LGL E A + T K N L+ + + + + R
Sbjct: 157 VSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRK 216
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
+M G P TYN ++ LCK G ++ L +M PD +TY I
Sbjct: 217 FFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYG 276
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+VG + + FN+M G P + T+ I Y F + A++Y + + +
Sbjct: 277 KVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVV 336
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
YS L K A +L +M + GL PN Y ++
Sbjct: 337 TYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLI 377
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 51/112 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +I C + + + +L EM+ G + ++ K G+ +DA +EM
Sbjct: 478 YGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQ 537
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+TY + I C G ++A ++F +M+ GLQP +A + + I G
Sbjct: 538 DVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDG 589
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 71/183 (38%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ +C+ ++ M + G P Y ++ K + DA ++L++M
Sbjct: 408 YTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMT 467
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
N PD I Y I C K + +M RG+ I YF +
Sbjct: 468 ECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSS 527
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA + D ++ + Y +L + +A + M+ GL+PNV+VY ++
Sbjct: 528 DALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLI 587
Query: 479 KHL 481
L
Sbjct: 588 DGL 590
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 48/120 (40%)
Query: 292 TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADAC 351
E + Y +LI +C + D M +G +P Y ++ LC N A
Sbjct: 541 VEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAK 600
Query: 352 ELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
+L +EM R PD + I + + G A ++M + ++ L + + + G+
Sbjct: 601 KLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGF 660
>gi|356547370|ref|XP_003542086.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 628
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 105/217 (48%), Gaps = 3/217 (1%)
Query: 263 SCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
CL+ +R + L+E +Y K + V ++ L+ C+ + +LV+M
Sbjct: 205 GCLLDALRKNGSVKEAASLFEELRYRWKPS---VKHFTSLLYGWCKEGKLMEAKHVLVQM 261
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
+ G EP + YN +LG + + DA +LL+EM + C P+A +Y + I C+ +
Sbjct: 262 KDAGIEPDIVVYNNLLGGYAQADKMGDAYDLLKEMRRKGCEPNATSYTVLIQSLCKHERL 321
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
+ A F +M + G Q L T++ I G+ + + + Y+ + + + ++Y +
Sbjct: 322 EEATRVFVEMQRNGCQADLVTYSTLISGFCKWGKIKRGYELLDEMIQQGHFPNQVIYQHI 381
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
H+K K +++EM K G P++S+Y V++
Sbjct: 382 MVAHEKKEELEECKELVNEMQKIGCAPDLSIYNTVIR 418
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 68/167 (40%), Gaps = 36/167 (21%)
Query: 282 YEMAKYVIKKT-ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
Y++ K + +K E + Y +LI+ +C+ + + VEM++ GC+ +TY+ ++
Sbjct: 290 YDLLKEMRRKGCEPNATSYTVLIQSLCKHERLEEATRVFVEMQRNGCQADLVTYSTLISG 349
Query: 341 LCKNGQDADACELLEEMLGRN-----------------------------------CHPD 365
CK G+ ELL+EM+ + C PD
Sbjct: 350 FCKWGKIKRGYELLDEMIQQGHFPNQVIYQHIMVAHEKKEELEECKELVNEMQKIGCAPD 409
Query: 366 AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
Y I +C++G+ +N+M GL P + T I G+
Sbjct: 410 LSIYNTVIRLACKLGEVKEGVRLWNEMESSGLSPSIDTFVIMINGFL 456
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 114/272 (41%), Gaps = 46/272 (16%)
Query: 247 KKGIWRVVEVLNQV-GGSCLVSGVRALIEMFSVLGLY-EMAKYVIKKTERKVSYYNILIK 304
K+G V ++N V G C GV F +GL EM + K + YN LI
Sbjct: 137 KRGFTVNVFIMNIVLKGLCRNGGV------FEAMGLIREMGR---KSVSPDIVSYNTLIN 187
Query: 305 EMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE--------- 355
+C+ K LL+EM GC P ++T ++ LCK+G+ +A ELLE
Sbjct: 188 GLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDA 247
Query: 356 --------------------------EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFF 389
EMLG+ + +TY + CR+G++ A
Sbjct: 248 DVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVL 307
Query: 390 NQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKN 449
N M + G+ P + T+ I G R A + L +K + SN+ Y++L S K
Sbjct: 308 NAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKE 367
Query: 450 NNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ A +L M++ G + +V Y ++K L
Sbjct: 368 GLVIDAFKILRMMIEKGKKADVVTYNTLMKGL 399
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 114/268 (42%), Gaps = 14/268 (5%)
Query: 243 KALTKKGIWRVVEVLNQVGGSCLVSG-VRALIEMFSVLGLYEMAKYVIKKTERKVSY-YN 300
+ + KKG + N + G CL +G ++ +E++ K V+ S+ Y+
Sbjct: 450 RKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELW---------KQVLDLGFVPNSFTYS 500
Query: 301 ILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGR 360
ILI C+ + L EMR G P YN ++ LCK G A L +EM
Sbjct: 501 ILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNA 560
Query: 361 NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
NC PD I++ I + + G F +MV+ GL+P T + I ++A
Sbjct: 561 NCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEA 620
Query: 421 YKYVV-LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
+ + A + + + SLL L K + + N+L +M G + + +L
Sbjct: 621 KSALERMVASGFTPDALVYDSLLKGLSSKGDTTEII-NLLHQMAAKGTVLDRKIVSTILT 679
Query: 480 HL-HTSHQEHMAKCLSSRYSSLSLGSSV 506
L H+ + + + L + + S G+S+
Sbjct: 680 CLCHSIQEVDVMELLPTFFQGTSEGASI 707
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 63/133 (47%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K V Y+ L+ +CR +K +L M + G P +TY ++ LCK+G+
Sbjct: 278 KGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATH 337
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A +LL M+ + P +TY + + C+ G AF M+++G + + T+ +K
Sbjct: 338 AMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMK 397
Query: 410 GYFIFYRYEDAYK 422
G + ++A K
Sbjct: 398 GLCDKGKVDEALK 410
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 66/137 (48%), Gaps = 3/137 (2%)
Query: 278 VLGLYEMAKYVIKKTER-KVSYYNILIKEMCRRCDFKGPRDLLVEM--RQVGCEPITLTY 334
V+ +++ + +I+K ++ V YN L+K +C + L M + EP T+
Sbjct: 370 VIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTF 429
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N ++G LCK G+ A ++ +M+ + + +TY + + + GK A + Q++
Sbjct: 430 NMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLD 489
Query: 395 RGLQPRLATHAAFIKGY 411
G P T++ I G+
Sbjct: 490 LGFVPNSFTYSILIDGF 506
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 88/191 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ +LL M+ GC P +TY ++ LCK + A A E+L
Sbjct: 191 VITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLR 250
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EML C P+ +TY + CR + A M RG P + T+ I G
Sbjct: 251 EMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVG 310
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R +DA + DK + M+Y++L + K + + +L + G++P+V Y
Sbjct: 311 RVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYS 370
Query: 476 RVLKHLHTSHQ 486
V+ L S++
Sbjct: 371 SVIYGLCRSNR 381
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 75/171 (43%), Gaps = 7/171 (4%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
+L EMR GCEP +TYN ++ LCKN + A EL E M C P +TY +
Sbjct: 101 ILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLF 160
Query: 378 RVGKFDVAFNFFNQMVKR-------GLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADK 430
R GK + A F +M+ R P + T++ I G R A + + +
Sbjct: 161 RTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKAR 220
Query: 431 YKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
S + Y++L K + A VL EM+ G PN+ Y +L L
Sbjct: 221 GCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGL 271
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 89/198 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ +CR L+ +M GC P +TY ++ LCK G+ DAC +L +M+
Sbjct: 264 YNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMI 323
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD + Y + I C+ + D + + V G++P + T+++ I G R +
Sbjct: 324 DKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLD 383
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + ++ + +LYS L K A ++ M +G +V Y ++
Sbjct: 384 EACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLI 443
Query: 479 KHLHTSHQEHMAKCLSSR 496
L + + A L +R
Sbjct: 444 DGLCKAGRVDEAHLLLAR 461
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 73/160 (45%)
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
C P +TY+ ++ LCK + + A ELLE M R C PD ITY I + C+ K A+
Sbjct: 187 CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAW 246
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
+M+ G P L T+ + + G R DA + + + + + Y L
Sbjct: 247 EVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGL 306
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
K A +L++M+ G P++ +Y ++ L + Q
Sbjct: 307 CKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQ 346
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 62/129 (48%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ +I +CR LL+ ++ GC P + Y+ ++ LCK G+ +A +L E
Sbjct: 366 VVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYE 425
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M G C D +TY I C+ G+ D A +MV+ G P T+ + IKG
Sbjct: 426 VMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLN 485
Query: 416 RYEDAYKYV 424
++A + V
Sbjct: 486 HLDEAIELV 494
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 89/212 (41%), Gaps = 8/212 (3%)
Query: 263 SCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
S L+ G+ ++ LYE+ + V Y+ LI +C+ LL M
Sbjct: 405 STLIDGLCKAGKVDEAFDLYEVMAG--DGCDADVVTYSTLIDGLCKAGRVDEAHLLLARM 462
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
++G P T+TYN ++ LC +A EL+EEM NC P A+TY I I CR+ +
Sbjct: 463 VRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERV 522
Query: 383 DVAFNFFNQMVKR-----GLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
D A Q R G +++ I G R +A Y D ++
Sbjct: 523 DSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHI 582
Query: 438 LYS-LLASLHDKNNNPVMAKNVLSEMMKNGLR 468
YS LL L + + VL +M++ G R
Sbjct: 583 TYSILLEGLKKSKDLHELRHLVLDQMVQLGYR 614
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 79/187 (42%), Gaps = 2/187 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y LI +C+ K +L +M G P + YN ++ LCK Q ++ LL
Sbjct: 296 VVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLR 355
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ PD +TY I CR + D A + RG P + ++ I G
Sbjct: 356 RAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAG 415
Query: 416 RYEDAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ ++A+ Y V++ D + + YS L K A +L+ M++ G P+ Y
Sbjct: 416 KVDEAFDLYEVMAGDGCDADV-VTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTY 474
Query: 475 RRVLKHL 481
++K L
Sbjct: 475 NSLIKGL 481
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 79/200 (39%), Gaps = 9/200 (4%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ LI +C+ DL M GC+ +TY+ ++ LCK G+ +A LL
Sbjct: 401 VILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLA 460
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+ P +TY I C + D A +M + P T+ I G
Sbjct: 461 RMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRME 520
Query: 416 RYEDAYKYVVLSADKYK-------SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLR 468
R + A V+L K + + + YS L K A + EM+ NG+
Sbjct: 521 RVDSA--VVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVI 578
Query: 469 PNVSVYRRVLKHLHTSHQEH 488
P+ Y +L+ L S H
Sbjct: 579 PDHITYSILLEGLKKSKDLH 598
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 62/160 (38%), Gaps = 7/160 (4%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M+ G T+ Y +L L K + A +L EM C P+ +TY I C+ +
Sbjct: 70 MQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNE 129
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKY------KSSS 435
D A F M P + T+ + G F + E A D+ + S
Sbjct: 130 PDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSP 189
Query: 436 NML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
N++ YS+L K N A +L M G P+V Y
Sbjct: 190 NVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITY 229
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 63/167 (37%)
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
C+P TY +L C+ G+ A +EM +N P+ I I C+ + A
Sbjct: 5 CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
F M G+ + A + G + R + A + D + + Y+ L
Sbjct: 65 RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
KNN P A+ + M P++ Y +L L + + A L
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMAL 171
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 44/115 (38%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y L++ CR + + EMR P + ++ LCK + DA
Sbjct: 9 VYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCFR 68
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
M G D + Y + + + D A ++M G +P + T+ + I G
Sbjct: 69 AMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDG 123
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 6/200 (3%)
Query: 216 QLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEM 275
+ L+ V +C NE+ + L S K + +RV+ +N G S V ALI
Sbjct: 366 EFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA-YRVLREMNDNGFSPSVVTYNALING 424
Query: 276 FSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPI 330
V G E A V++ + K V Y+ ++ CR D + EM + G +P
Sbjct: 425 HCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPD 484
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN 390
T+TY+ ++ C+ + +AC+L EEML PD TY I C G + A N
Sbjct: 485 TITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHN 544
Query: 391 QMVKRGLQPRLATHAAFIKG 410
+MV++G+ P + T++ I G
Sbjct: 545 EMVEKGVLPDVVTYSVLING 564
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 84/190 (44%)
Query: 289 IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
+K E + YN++I +CR K +L EM + G +TYN ++ CK G
Sbjct: 268 LKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFH 327
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
A + EML P ITY I C+ G + A F +QM RGL P T+ +
Sbjct: 328 QALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLV 387
Query: 409 KGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLR 468
G+ +AY+ + D S S + Y+ L + H A VL +M + GL
Sbjct: 388 DGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLS 447
Query: 469 PNVSVYRRVL 478
P+V Y VL
Sbjct: 448 PDVVSYSTVL 457
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 84/181 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LIK C+ +F + EM + G P +TY ++ +CK G A E L++M
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R P+ TY + + G + A+ +M G P + T+ A I G+ + + E
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA + +K S + YS + S ++ + A V EM++ G++P+ Y ++
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Query: 479 K 479
+
Sbjct: 493 Q 493
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 87/183 (47%), Gaps = 14/183 (7%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
+L EM G P +TYN ++ C G+ DA +LE+M + PD ++Y + C
Sbjct: 402 VLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFC 461
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR-------YEDAYKYVVLSADK 430
R D A +MV++G++P T+++ I+G+ R YE+ + V L D+
Sbjct: 462 RSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLR-VGLPPDE 520
Query: 431 YKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
+ Y+ L + + + A + +EM++ G+ P+V Y ++ L+ + A
Sbjct: 521 FT------YTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREA 574
Query: 491 KCL 493
K L
Sbjct: 575 KRL 577
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 20/220 (9%)
Query: 271 ALIEMFSVLGLYEMA-----KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI + + G E A + V K V Y++LI + ++ + + LL+++
Sbjct: 525 ALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYE 584
Query: 326 GCEPITLTYNYVL---------------GVLCKNGQDADACELLEEMLGRNCHPDAITYE 370
P +TY+ ++ C G +A ++ E MLG+N PD Y
Sbjct: 585 ESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYN 644
Query: 371 IFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADK 430
I I CR G A+ + +MVK G T A +K + + +V
Sbjct: 645 IMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRS 704
Query: 431 YKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
+ S +L ++ + N + +VL+EM K+G PN
Sbjct: 705 CELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 112/260 (43%), Gaps = 13/260 (5%)
Query: 234 GFLPVLISSKALT----KKG-IWRVVEVLNQVGGSCLVSGVRA---LIEMFSVLGLYEMA 285
G P +I+ +L K G + R +E L+Q+ L R L++ FS G A
Sbjct: 340 GLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 399
Query: 286 KYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
V+++ V YN LI C + +L +M++ G P ++Y+ VL
Sbjct: 400 YRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG 459
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
C++ +A + EM+ + PD ITY I C + A + + +M++ GL P
Sbjct: 460 FCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPD 519
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
T+ A I Y + E A + +K + YS+L + +K + AK +L
Sbjct: 520 EFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLL 579
Query: 461 EMMKNGLRPNVSVYRRVLKH 480
++ P+ Y ++++
Sbjct: 580 KLFYEESVPSDVTYHTLIEN 599
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 107/232 (46%), Gaps = 5/232 (2%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKK-----TERKVSYYNILIKEM 306
RV+E L+ G + V ++ G + A ++++ E V YN ++K +
Sbjct: 178 RVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGL 237
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
C + ++L+ EM ++ C P +T+N ++ LC+NG E+L +M+ C PD
Sbjct: 238 CMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDI 297
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
Y I C+ G +VA N+M GL+P + + +KG R+E+ + +
Sbjct: 298 RMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAE 357
Query: 427 SADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DK ++ +++L +N +L +M++ G P+V Y V+
Sbjct: 358 MFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVI 409
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 111/255 (43%), Gaps = 9/255 (3%)
Query: 245 LTKKGIW-RVVEVLNQVGGSCLVSGVR---ALIEMFSVLGLYEMAKYVIKKT-----ERK 295
L + G++ RV EVL Q+ +R +I+ G E+A ++ + +
Sbjct: 272 LCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPN 331
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN L+K +C ++ +LL EM C +T+N ++ C+NG ELLE
Sbjct: 332 VVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLE 391
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML R C PD ITY I C+ G D A M G +P ++ +KG
Sbjct: 392 QMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAE 451
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R+ DA + + + + ++ L + K A +L +M+ NG P++ Y
Sbjct: 452 RWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYS 511
Query: 476 RVLKHLHTSHQEHMA 490
V+ L + + A
Sbjct: 512 TVIDGLGKAGKTDEA 526
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 116/281 (41%), Gaps = 12/281 (4%)
Query: 211 YETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQV---GGSCLVS 267
+E +LL + L++ F L L RV+E+L Q+ G V
Sbjct: 348 WEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVD----RVIELLEQMLERGCMPDVI 403
Query: 268 GVRALIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
+I F GL + A ++K + Y I++K +C + DL+ +M
Sbjct: 404 TYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQM 463
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
Q GC +T+N ++ LCK G A ELL++ML C PD I+Y I + GK
Sbjct: 464 IQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 523
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
D A N MV +G+ P +++ R + D S +LY+ +
Sbjct: 524 DEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAV 583
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHT 483
S K A L+ M+ +G PN S Y +++ L +
Sbjct: 584 ISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLAS 624
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 86/198 (43%), Gaps = 14/198 (7%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +++ +C R +L EM + GC PI Y+ +L C+ G A +LE++
Sbjct: 125 YFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLH 184
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY- 417
R C D + + C G D A + + G +P + ++ A +KG + R+
Sbjct: 185 ARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWG 244
Query: 418 ---EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
E + V ++ + N L S L +N VL++M+++G P++ +Y
Sbjct: 245 CVQELMEEMVRMACPPNIVTFNTLISYLC----RNGLFERVHEVLAQMVEHGCTPDIRMY 300
Query: 475 RRVLK------HLHTSHQ 486
++ HL +H+
Sbjct: 301 ATIIDGICKEGHLEVAHE 318
>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 680
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 131/298 (43%), Gaps = 25/298 (8%)
Query: 194 NSDICSLVIDNC---GRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGI 250
N+ +C++VI+ GR+DD LN+ +Y N + VL + L + G
Sbjct: 326 NTTLCNIVINAICKQGRVDD---AYDFLNNMGMYGC--NPDTISYTTVL---RGLCRAGR 377
Query: 251 WRVVEVL--NQVGGSCLVSGV--RALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNI 301
W + L V +C + V I + GL E A +I+ + YN
Sbjct: 378 WEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNA 437
Query: 302 LIKEMCRRCDFKGPRDLLVEM-RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGR 360
L+ C +G D +E+ + CEP T+TY +L LC + A ELL EM+ +
Sbjct: 438 LVHGFC----VQGRVDSALELFNNLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMIQK 493
Query: 361 NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
+C +A+T+ + + + C+ G + A NQM++ G P L T + G E+A
Sbjct: 494 DCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEA 553
Query: 421 YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ + K S + YS + + + + A +L + G+RP V +Y ++L
Sbjct: 554 LELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKIL 611
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M Q GC+P +TY +L +CK+ +A +L+EM + C P+ +TY + I CR G+
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
D A N++ G QP + ++ +KG R++D DK + + + +
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
L + A VL +M ++G PN ++ V+ +
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAI 337
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 85/207 (41%), Gaps = 42/207 (20%)
Query: 206 GRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISS----KALTKKGIWRVVEVLNQVG 261
GR+DD +++LN + Y GF P ++S K L W V+VL
Sbjct: 236 GRVDD---AKEILNRLSSY---------GFQPDIVSYTTVLKGLCAARRWDDVKVL---- 279
Query: 262 GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
A+ V KK +++L++ CR + +L +
Sbjct: 280 ----------------------FAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQ 317
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M Q GC P T N V+ +CK G+ DA + L M C+PD I+Y + CR G+
Sbjct: 318 MSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGR 377
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFI 408
++ A +MV++ P T FI
Sbjct: 378 WEHAKELLPEMVRKNCPPNEVTFNTFI 404
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 83/210 (39%), Gaps = 35/210 (16%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y +L++ +C+ F ++L EMR GC P +TYN ++ +C+ G+ DA E+L
Sbjct: 187 VVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILN 246
Query: 356 -----------------------------------EMLGRNCHPDAITYEIFIVYSCRVG 380
EM+ + C P+ +T+++ + + CR G
Sbjct: 247 RLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGG 306
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+ A QM + G P I R +DAY ++ + + Y+
Sbjct: 307 MVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYT 366
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
+ + AK +L EM++ PN
Sbjct: 367 TVLRGLCRAGRWEHAKELLPEMVRKNCPPN 396
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 52/112 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N L+ + + C+ + +LL + G T+TY+ V+ VL + + +A ++L +
Sbjct: 537 FNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQ 596
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
P Y + C+ + D A +FF MV G P +T+ I+G
Sbjct: 597 DMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEG 648
>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
Length = 1013
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 5/219 (2%)
Query: 280 GLYEMAKYVIKK-TERKVSYYNILIKEMCRRCDFKGPRDLLVE----MRQVGCEPITLTY 334
G E AKY++ + S ++ + + + C D++++ M G Y
Sbjct: 638 GAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVY 697
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N +L VLC +G A +LEEMLG PD IT+ I+ C+ D AF + QM+
Sbjct: 698 NTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLH 757
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM 454
+ + P +AT + G R +A ++ +N+ Y +LA+ H K +N V
Sbjct: 758 QNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVE 817
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
A + EM+ G P VS Y ++ + AK L
Sbjct: 818 AMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKEL 856
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 11/196 (5%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+ I +C FK + L EMR +G +P TYN ++ C+ G+ A A +LL EM
Sbjct: 557 YNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMK 616
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+ ITY + G + A N+MV G P TH ++ R +
Sbjct: 617 MSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLD 676
Query: 419 DAYKYVVLSADKYKSSSNM-----LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
V+L ++ ++ + +Y+ L + + A VL EM+ +G+ P+
Sbjct: 677 -----VILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTIT 731
Query: 474 YRR-VLKHLHTSHQEH 488
+ +L H +SH ++
Sbjct: 732 FNALILGHCKSSHLDN 747
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 96/245 (39%), Gaps = 4/245 (1%)
Query: 241 SSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYN 300
++ AL +G + L+ +G + L++G + + + L + + + + V YN
Sbjct: 153 AAAALADRG--GGIHALDVIGWNTLIAGYCRVGDTPAALSVAD--RMTAQGLPMDVVGYN 208
Query: 301 ILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGR 360
L+ CR R +L M++ G +P TY + C+ +A +L E M+
Sbjct: 209 TLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRN 268
Query: 361 NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
D +T + CR G+F A+ F +M K G P T+ I R ++
Sbjct: 269 GVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKEL 328
Query: 421 YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKH 480
+ + + Y+ L K K+ L + + L PN Y ++
Sbjct: 329 LSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDA 388
Query: 481 LHTSH 485
L +H
Sbjct: 389 LCKAH 393
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 4/150 (2%)
Query: 332 LTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQ 391
+ Y ++ L K G A + +E++ RN PDA+ Y +FI C +GKF A +F +
Sbjct: 520 VNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTE 579
Query: 392 MVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKS-SSNML-YSLLASLHDKN 449
M GL+P +T+ I + + E A +L K S N++ Y+ L +
Sbjct: 580 MRNMGLKPDQSTYNTMIVSH--CRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGT 637
Query: 450 NNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
AK +L+EM+ G P+ +RRVL+
Sbjct: 638 GAVEKAKYLLNEMVSAGFSPSSLTHRRVLQ 667
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 77/186 (41%), Gaps = 6/186 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI + + D E+ P + YN + LC G+ +A L EM
Sbjct: 522 YTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMR 581
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD TY IV CR G+ A ++M ++P L T+ + G F E
Sbjct: 582 NMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVE 641
Query: 419 DAYKYVV---LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
A KY++ +SA SS L A + + ++ ++ MM GL +++VY
Sbjct: 642 KA-KYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVIL--DIHEWMMNAGLHADITVYN 698
Query: 476 RVLKHL 481
+L+ L
Sbjct: 699 TLLQVL 704
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
+L+EM + G EP LTY+ + K +A L EM+G+ P TY I
Sbjct: 786 VLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFT 845
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ G A F M KRG+ P T+ + G++ R +
Sbjct: 846 KAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWYDLAREQ 886
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 75/178 (42%), Gaps = 16/178 (8%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
L+ +CR F L EM +VG P +TY ++ L K G+ + LL EM+ R
Sbjct: 280 LVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRG 339
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
D +TY + + + GK D + + L P T+ I + ++A
Sbjct: 340 VVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEA- 398
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
+ V+L ++ S N+ V +V++ +K GL + Y+R++K
Sbjct: 399 EQVLLEMEEKSISPNV---------------VTFSSVINGFVKRGLLDKATEYKRMMK 441
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 4/113 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNIL+ + D +L EM + G +T N +L LC+NGQ DA L +
Sbjct: 106 YNILLAALS---DHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQ-VDAAAALADRG 161
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
G D I + I CRVG A + ++M +GL + + + G+
Sbjct: 162 GGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGF 214
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 85/205 (41%), Gaps = 7/205 (3%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L EM +K + S YN +I CR+ + LL EM+ +P +TYN ++
Sbjct: 577 LTEMRNMGLKPDQ---STYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAG 633
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
L G A LL EM+ P ++T+ + + + DV + M+ GL
Sbjct: 634 LFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHAD 693
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSA--DKYKSSSNMLYSLLASLHDKNNNPVMAKNV 458
+ + ++ + Y VVL + + ++ L H K+++ A
Sbjct: 694 ITVYNTLLQ--VLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFAT 751
Query: 459 LSEMMKNGLRPNVSVYRRVLKHLHT 483
++M+ + PN++ + +L L +
Sbjct: 752 YAQMLHQNISPNIATFNTLLGGLES 776
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 95/211 (45%), Gaps = 4/211 (1%)
Query: 280 GLYEMAKYVIKKTERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYN 335
G E A +K + + S Y++LI +C+ +LL M+ GC P +TY
Sbjct: 93 GKIETALEFFRKMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYT 152
Query: 336 YVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR 395
++ LCK + A A E+L EML C P+ +TY + CR + A M R
Sbjct: 153 ILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCR 212
Query: 396 GLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMA 455
G P + T+ I G R +DA + DK + M+Y++L + K + +
Sbjct: 213 GCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDES 272
Query: 456 KNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
+L + G++P+V Y V+ L S++
Sbjct: 273 IALLRRAVSGGIKPDVVTYSSVIYGLCRSNR 303
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 87/189 (46%), Gaps = 2/189 (1%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V YN LI +C+ + ++L M+ V C P +TYN +L L + G+ A
Sbjct: 7 EPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMA 66
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
L +EML R H D I++ I + CR GK + A FF +M R P + T++ I G
Sbjct: 67 LFQEMLDRRSH-DVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSVLIDGLC 124
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
R A + + + S + Y++L K + A VL EM+ G PN+
Sbjct: 125 KANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLV 184
Query: 473 VYRRVLKHL 481
Y +L L
Sbjct: 185 TYNSLLHGL 193
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 87/194 (44%), Gaps = 1/194 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ +I +CR LL+ ++ GC P + Y+ ++ LCK G+ +A +L E
Sbjct: 288 VVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYE 347
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M G C D +TY I C+ G+ D A +MV+ G P T+ + IKG
Sbjct: 348 VMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLN 407
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLA-SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
++A + V + S + Y++L + A + EM+ NG+ P+ Y
Sbjct: 408 HLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITY 467
Query: 475 RRVLKHLHTSHQEH 488
+L+ L S H
Sbjct: 468 SILLEGLKKSKDLH 481
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 2/192 (1%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
+A + K + YN+LI +C+ LL G +P +TY+ V+ LC+
Sbjct: 241 LADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCR 300
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
+ + +AC LL + R C PD I Y I C+ GK D AF+ + M G + T
Sbjct: 301 SNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVT 360
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY-SLLASLHDKNNNPVMAKNVLSEM 462
++ I G R ++A+ + S M Y SL+ L D N+ A ++ EM
Sbjct: 361 YSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLD-EAIELVEEM 419
Query: 463 MKNGLRPNVSVY 474
++ P+ Y
Sbjct: 420 ERSNCAPSAVTY 431
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 89/198 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ +CR L+ +M GC P +TY ++ LCK G+ DAC +L +M+
Sbjct: 186 YNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMI 245
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD + Y + I C+ + D + + V G++P + T+++ I G R +
Sbjct: 246 DKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLD 305
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + ++ + +LYS L K A ++ M +G +V Y ++
Sbjct: 306 EACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLI 365
Query: 479 KHLHTSHQEHMAKCLSSR 496
L + + A L +R
Sbjct: 366 DGLCKAGRVDEAHLLLAR 383
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
+A+ V T YN LIK +C +L+ EM + C P +TYN ++ +C+
Sbjct: 381 LARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCR 440
Query: 344 NGQ-DADACELLEEMLGRNCHPDAITYEIFI 373
+ D+ A + +EM+ PD ITY I +
Sbjct: 441 MERVDSAALDYFQEMIDNGVIPDHITYSILL 471
>gi|255661028|gb|ACU25683.1| pentatricopeptide repeat-containing protein [Citharexylum
montevidense]
Length = 376
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 127/284 (44%), Gaps = 11/284 (3%)
Query: 204 NCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGS 263
N G +D+ ++ +L+ + + + +G L K + V+E+ Q GG+
Sbjct: 71 NNGEVDEVFSIWELMKESGFVE---DSTTYGILVHGFCKNGYNNKSL-HVLEIAKQEGGA 126
Query: 264 CLVSGVRALIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNILIKEMCRRCDFKGPRDL 318
A+I +G + A V+ + YN LI + F+ +
Sbjct: 127 LDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASKFEDAIRV 186
Query: 319 LVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCR 378
E+ C P +TYN ++ LCK + A+A +L++EML + +P ITY + I C+
Sbjct: 187 FKELGTRHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWNPSVITYSLLIKGLCQ 246
Query: 379 VGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML 438
K ++A +NQ++ +G +P + H I G + E A + + + + + N++
Sbjct: 247 DHKVEMALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTEHASE-LYFDMNHWNCAPNLV 305
Query: 439 -YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y+ L K + A + + +++NGL P++ Y LK L
Sbjct: 306 TYNTLMEGFYKGGDTRNALVIWARILRNGLLPDIISYNITLKGL 349
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 96/209 (45%)
Query: 282 YEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+++ + + ++ R V+ +N +++ + + + M++ G + TY ++
Sbjct: 45 FDLWELMGREGSRNVASFNTMMRGLFNNGEVDEVFSIWELMKESGFVEDSTTYGILVHGF 104
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
CKNG + + +LE DA Y I C++GK D A + N M++ G +P
Sbjct: 105 CKNGYNNKSLHVLEIAKQEGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNT 164
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
+ A I G ++EDA + ++ S + + Y+ L + K A +++ E
Sbjct: 165 QVYNALINGLLGASKFEDAIRVFKELGTRHCSPTIVTYNTLINGLCKGERFAEAYDLVKE 224
Query: 462 MMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
M++ G P+V Y ++K L H+ MA
Sbjct: 225 MLEKGWNPSVITYSLLIKGLCQDHKVEMA 253
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 47/108 (43%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +NILI +C + +L +M C P +TYN ++ K G +A +
Sbjct: 269 VQMHNILIHGLCSVGKTEHASELYFDMNHWNCAPNLVTYNTLMEGFYKGGDTRNALVIWA 328
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
+L PD I+Y I + C + VA F N V + + P + T
Sbjct: 329 RILRNGLLPDIISYNITLKGLCACNRISVAILFLNDAVTKNIVPTVIT 376
>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
Length = 353
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 93/195 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +N+LI +CR+ + ++L ++ + GC P +L+YN +L CK + A L+
Sbjct: 97 VVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLD 156
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+ R C+PD ++Y + CR G+ DVA +Q+ +G P L ++ I G
Sbjct: 157 LMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAG 216
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ ++A + + K + YS +A+ + + A ++ G+RPN +Y
Sbjct: 217 KTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYN 276
Query: 476 RVLKHLHTSHQEHMA 490
++ L + H A
Sbjct: 277 AIILGLCKRRETHSA 291
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 84/183 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ C++ L M GC P ++YN +L LC++G+ A ELL ++
Sbjct: 135 YNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLK 194
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C P I+Y I + GK A N+MV +GLQP + T++ G R E
Sbjct: 195 DKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIE 254
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA + D + +LY+ + K A ++ + M+ NG PN S Y ++
Sbjct: 255 DAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILI 314
Query: 479 KHL 481
+ L
Sbjct: 315 EGL 317
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 91/221 (41%), Gaps = 35/221 (15%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ YN+++ +C+ + L + GCEP T++YN VL LC + DA EL+
Sbjct: 27 IVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMG 86
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP---------------- 399
EM + C P+ +T+ + I + CR G + A Q+ K G P
Sbjct: 87 EMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQK 146
Query: 400 RLATHAAFIKGYFIFYRYEDAYKY-VVLSADKYKSSSNMLYSLLASLHDKNNNPVM---- 454
++ AF+ Y D Y +L+A ++ LL L DK PV+
Sbjct: 147 KMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYN 206
Query: 455 --------------AKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A +L+EM+ GL+P++ Y + L
Sbjct: 207 TVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGL 247
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 82/185 (44%), Gaps = 2/185 (1%)
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
C+R +K LL EMR GC P +TYN V+ +C+ G+ DA E L+ + C P+
Sbjct: 3 CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
++Y I + C +++ A +M ++G P + T I E A + V+
Sbjct: 63 VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALE-VLE 121
Query: 427 SADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSH 485
KY + N L Y+ L K A L M+ G P++ Y +L L S
Sbjct: 122 QIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSG 181
Query: 486 QEHMA 490
+ +A
Sbjct: 182 EVDVA 186
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 82/190 (43%), Gaps = 22/190 (11%)
Query: 230 EKAFGFLPVLISS-------------KALTKKGIWRV-VEVLNQV---GGSCLVSGVRAL 272
+KA FL +++S AL + G V VE+L+Q+ G + ++ +
Sbjct: 149 DKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTV 208
Query: 273 IEMFSVLG-----LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGC 327
I+ + G L + + V K + + Y+ + +CR + +++ +G
Sbjct: 209 IDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGI 268
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
P T+ YN ++ LCK + A +L M+G C P+ TY I I G A +
Sbjct: 269 RPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARD 328
Query: 388 FFNQMVKRGL 397
+++ RG+
Sbjct: 329 LLDELCSRGV 338
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 91/194 (46%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N LI +C+ + + LL +M + G +TYN ++ CK G+ + +L EM+
Sbjct: 495 NALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVK 554
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
+ PD TY + I CR+GK D A N +N+ R L P + T+ I GY + E+
Sbjct: 555 QGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEE 614
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
K + ++++Y+ L + +N N V A + +M G+ P + Y ++
Sbjct: 615 GEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIH 674
Query: 480 HLHTSHQEHMAKCL 493
+ + AKCL
Sbjct: 675 GMCNIGRMEDAKCL 688
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 117/270 (43%), Gaps = 16/270 (5%)
Query: 236 LPVLISSKALTKKGIWRVVEVLNQVGGSCL-VSGVRALIEMF----------SVLGLYE- 283
LPVL I + LN+VG S + V+ V LI ++ + +G++
Sbjct: 143 LPVLFGDPKNRHIEIASAMADLNEVGESGVAVAAVDLLIHVYCTQFRNVGFRNAIGVFRF 202
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
+A + T + ++ L+ + + + + + MRQ G P ++ + CK
Sbjct: 203 LANKGVFPTVKTCTF---LLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCK 258
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
G+ DA +L +M P+ +TY I C+ G D AF F +MVK G+ L T
Sbjct: 259 GGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLIT 318
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
++ I G ++ +A + + +K + + ++Y+ L + K N A + +M+
Sbjct: 319 YSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMV 378
Query: 464 KNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
G+ PN +++ Q A+C+
Sbjct: 379 SKGINPNSVTLNSIIQGFCKIGQMEQAECI 408
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 142/339 (41%), Gaps = 24/339 (7%)
Query: 150 KLLSMSVSLSNASVIEILRVL--NSEKVSALCFLKYM--REIMPEFYKNSDICSLVIDNC 205
++LS S++ + I+ L NS SAL FL+ M R + P + + +LV C
Sbjct: 411 EMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRP---NDGLLTTLVGGLC 467
Query: 206 --GRLDDYETM--RQLLNDFNVYQVCLNEKAFGFLPVLISSKA--LTKKGIWRVVEVLNQ 259
G+ D + R L F V N G +A L KK + R VL++
Sbjct: 468 KEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGF-VLDK 526
Query: 260 VGGSCLVSGV---RALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPR 316
+ + L+SG + E F + G EM K I E YN+LI MCR
Sbjct: 527 ITYNTLISGCCKEGKVEEGFKLRG--EMVKQGI---EPDTFTYNLLIHGMCRIGKLDEAV 581
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
+L E + P TY ++ CK + + +L E+L +N +++ Y I
Sbjct: 582 NLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAY 641
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
CR G AF + M +G+ P AT+++ I G R EDA K ++ K N
Sbjct: 642 CRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDA-KCLIDEMRKEGLLPN 700
Query: 437 ML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
++ Y+ L + K NVL EM + PN Y
Sbjct: 701 VVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITY 739
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 2/180 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y ++I C+ + L E+ E ++ YN ++ C+NG +A +L +
Sbjct: 596 VYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHD 655
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M + P TY I C +G+ + A ++M K GL P + + A I GY
Sbjct: 656 DMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLG 715
Query: 416 RYEDAYKYVVLSADKYKSSSN-MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ D V+ Y N + Y+++ + K+ + A +L EM+ G+ P+ Y
Sbjct: 716 QM-DKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTY 774
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 60/127 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ Y+ LI MC + + L+ EMR+ G P + Y ++G CK GQ +L+
Sbjct: 666 TATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQ 725
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM + HP+ ITY + I + G A ++MV +G+ P T+ G+
Sbjct: 726 EMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEG 785
Query: 416 RYEDAYK 422
+ E+ +K
Sbjct: 786 KIEEGFK 792
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 64/146 (43%), Gaps = 5/146 (3%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
+LI +G E AK +I + ++ V Y LI C+ ++L EM
Sbjct: 671 SLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSY 730
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
P +TY ++ K+G A +LL EM+G+ PD +TY + C+ GK +
Sbjct: 731 DIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEG 790
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGY 411
F + M + GL T+ + G+
Sbjct: 791 FKICDYMSQEGLPLDEITYTTLVHGW 816
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 91/213 (42%), Gaps = 12/213 (5%)
Query: 267 SGVRALIEMFSVL--GLYEMAKY-----VIKKTERK-----VSYYNILIKEMCRRCDFKG 314
GV A + +SVL GL ++ K+ V+K+T K YN LI C+ +
Sbjct: 310 DGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGD 369
Query: 315 PRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIV 374
+ +M G P ++T N ++ CK GQ A +LEEML R + + I
Sbjct: 370 ALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIH 429
Query: 375 YSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSS 434
+ C +F+ A F +M+ R ++P + G ++ DA + +K +
Sbjct: 430 WLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGA 489
Query: 435 SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
+ + + L K N A +L +M++ G
Sbjct: 490 NLVTTNALIHGLCKTGNMQEAVRLLKKMLERGF 522
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN +I +C+ ++L M + G P +TYN ++ C +GQ +A L+
Sbjct: 123 VVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLK 182
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M PD +TY + Y C+ G+ A F+ M KRGL+P + T+ ++GY
Sbjct: 183 KMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKG 242
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ + + L ++ ++S+L + K A V S+M + GL PN Y
Sbjct: 243 ALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYG 302
Query: 476 RVLKHL 481
V+ L
Sbjct: 303 AVIGIL 308
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 80/183 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C ++ +L++EM G T+ +N ++ CK G+ ++ +L + M+
Sbjct: 336 YNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMV 395
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD ITY I C GK D A MV G++P T++ I GY R +
Sbjct: 396 RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMK 455
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA S + Y+++ + AK + + K+G + +S Y +L
Sbjct: 456 DALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIIL 515
Query: 479 KHL 481
L
Sbjct: 516 HGL 518
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 87/208 (41%), Gaps = 35/208 (16%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+MRQ G P +TY V+G+LCK+G+ DA E+M+ P I Y I C
Sbjct: 288 KMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCN 347
Query: 381 KFDVA------------------FN-----------------FFNQMVKRGLQPRLATHA 405
K++ A FN F+ MV+ G++P + T++
Sbjct: 348 KWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYS 407
Query: 406 AFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKN 465
I GY + + ++A K + + YS L + + K + A + EM +
Sbjct: 408 TLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESS 467
Query: 466 GLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
G+ P++ Y +L+ L + + AK L
Sbjct: 468 GVSPDIITYNIILQGLFQTRRTAAAKEL 495
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 6/207 (2%)
Query: 283 EMAKYVIKKTERK----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVG--CEPITLTYNY 336
E A++V + R+ V YNIL+ +C + +LL M G C P ++Y+
Sbjct: 34 EDARHVFDELLRRGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYST 93
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
V+ K G EML + P+ +TY I C+ D A MVK G
Sbjct: 94 VINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 153
Query: 397 LQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAK 456
+ P T+ + + G+ + ++A ++ + Y+ L KN A+
Sbjct: 154 VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEAR 213
Query: 457 NVLSEMMKNGLRPNVSVYRRVLKHLHT 483
+ M K GL+P ++ Y +L+ T
Sbjct: 214 KIFDSMTKRGLKPEITTYGTLLQGYAT 240
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 54/115 (46%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++N +I C+ L M ++G +P +TY+ ++ C G+ +A +LL M
Sbjct: 370 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASM 429
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+ PD +TY I C++ + A F +M G+ P + T+ ++G F
Sbjct: 430 VSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLF 484
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 85/215 (39%), Gaps = 35/215 (16%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++ C K L +MR G EP +TYN ++ LCKNG+ +A ++ + M
Sbjct: 161 YNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMT 220
Query: 359 GRNCHPDAITYE--------------------------------IFIVYSC---RVGKFD 383
R P+ TY +F + C + K +
Sbjct: 221 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVE 280
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
A F++M ++GL P T+ A I R EDA Y D+ S N++Y+ L
Sbjct: 281 EAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLI 340
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
N A+ ++ EM+ G+ N + ++
Sbjct: 341 HGLCTCNKWERAEELILEMLDRGICLNTIFFNSII 375
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/184 (19%), Positives = 84/184 (45%)
Query: 295 KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
+++ Y L++ + LL M + G P ++ ++ K + +A +
Sbjct: 227 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVF 286
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
+M + +P+A+TY I C+ G+ + A +F QM+ GL P + + I G
Sbjct: 287 SKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTC 346
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
++E A + ++ D+ + + ++ + H K + ++ + M++ G++P++ Y
Sbjct: 347 NKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITY 406
Query: 475 RRVL 478
++
Sbjct: 407 STLI 410
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 50/106 (47%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNI+++ + + ++L V + + G + TYN +L LCKN DA + + +
Sbjct: 476 YNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLC 535
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
+ +A T+ I I +VG+ D A + F GL P T+
Sbjct: 536 LMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTY 581
>gi|294461967|gb|ADE76539.1| unknown [Picea sitchensis]
Length = 486
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 75/144 (52%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ +CR+ + + LL +M+ +GC P + YN V+ C+ G+ DAC++L +M
Sbjct: 311 YNTLLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITGFCREGRALDACQILRDMP 370
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C P+A++Y + C GKFD A +F +M+ G P ++ + I G +
Sbjct: 371 ENGCLPNALSYRTLVNGLCNEGKFDEAKDFVEEMISNGFIPHISIYHLLITGLCNEGKVG 430
Query: 419 DAYKYVVLSADKYKSSSNMLYSLL 442
+A + +V+ + + +S+L
Sbjct: 431 EACEVLVMMTKQTLAPHESTWSVL 454
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 81/183 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNILI+ C L +M + GC P TY+ ++ LC+ Q A +L+EML
Sbjct: 241 YNILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEML 300
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PDA+TY + CR A+ ++M G P + + I G+ R
Sbjct: 301 NKGYVPDALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITGFCREGRAL 360
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA + + + + + Y L + AK+ + EM+ NG P++S+Y ++
Sbjct: 361 DACQILRDMPENGCLPNALSYRTLVNGLCNEGKFDEAKDFVEEMISNGFIPHISIYHLLI 420
Query: 479 KHL 481
L
Sbjct: 421 TGL 423
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 92/217 (42%), Gaps = 9/217 (4%)
Query: 272 LIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
+IE++ +G+ A + E ++N+L+ + + L ++ + G
Sbjct: 174 IIEIYGEVGMPNEAIKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKLHEFG 233
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
P T TYN ++ C + + + A L +M + C PD TY I + CR + A
Sbjct: 234 ISPNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTAL 293
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML--YSLLAS 444
++M+ +G P T+ + +AY+ +LS K + + Y+ + +
Sbjct: 294 GVLDEMLNKGYVPDALTYNTLLNSLCRKMNLREAYR--LLSKMKVMGCNPDVINYNTVIT 351
Query: 445 LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + A +L +M +NG PN YR ++ L
Sbjct: 352 GFCREGRALDACQILRDMPENGCLPNALSYRTLVNGL 388
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 48/110 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I CR +L +M + GC P L+Y ++ LC G+ +A + +EEM+
Sbjct: 346 YNTVITGFCREGRALDACQILRDMPENGCLPNALSYRTLVNGLCNEGKFDEAKDFVEEMI 405
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
P Y + I C GK A M K+ L P +T + +
Sbjct: 406 SNGFIPHISIYHLLITGLCNEGKVGEACEVLVMMTKQTLAPHESTWSVLL 455
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 85/217 (39%), Gaps = 35/217 (16%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGC----------------------------- 327
S Y+ LI ++ R FK L+ +MR+ GC
Sbjct: 134 STYHTLICKLGRARQFKTMEGLIQQMRKDGCPYTPGLFVDIIEIYGEVGMPNEAIKAFHQ 193
Query: 328 ------EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
EP+ +N +L VL ++ A L +++ P+ TY I I C K
Sbjct: 194 MLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKLHEFGISPNTRTYNILIRAHCHSDK 253
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
A+ FN+M K+G P + T++ ++G + + A + +K + Y+
Sbjct: 254 LSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEMLNKGYVPDALTYNT 313
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
L + + N A +LS+M G P+V Y V+
Sbjct: 314 LLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVI 350
Score = 41.6 bits (96), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 36/79 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ +C F +D + EM G P Y+ ++ LC G+ +ACE+L M
Sbjct: 381 YRTLVNGLCNEGKFDEAKDFVEEMISNGFIPHISIYHLLITGLCNEGKVGEACEVLVMMT 440
Query: 359 GRNCHPDAITYEIFIVYSC 377
+ P T+ + ++ C
Sbjct: 441 KQTLAPHESTWSVLLMRIC 459
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 142/338 (42%), Gaps = 37/338 (10%)
Query: 198 CSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPV--LISS--KALTKKG---- 249
C+LV+ C ++ ++E ++++ GF+P +SS + L +KG
Sbjct: 300 CTLVLGLC-KVQEFEVGAGVMDEM---------IELGFVPTEAALSSLVEGLRRKGKVVD 349
Query: 250 IWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKV-----SYYNILIK 304
+ +V + +VG + ALI G ++ A+ + K+ K Y+ILI
Sbjct: 350 AFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILID 409
Query: 305 EMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHP 364
CRR L +M G + YN ++ CK G + A +EM+ + P
Sbjct: 410 SFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKP 469
Query: 365 DAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV 424
++Y I C GK AF +++M +G+ P T I F R DA++
Sbjct: 470 TVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLF 529
Query: 425 VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL------ 478
++ + + Y+++ H K N V A +L++M++ GL P+ YR ++
Sbjct: 530 DEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCST 589
Query: 479 -------KHLHTSHQEHMAKCLSSRYSSLSLGSSVEAR 509
K + H+EH K YS+L G E R
Sbjct: 590 GRVCEAKKFIDDLHREHF-KLNEMCYSALLHGYCKEGR 626
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 145/360 (40%), Gaps = 47/360 (13%)
Query: 133 VSEIIELLRSGDSETESKLLSMSVSLS-NASVIEILRVLNS-EKVSALCFLKYMREIMPE 190
+ E+IEL G TE+ L S+ L V++ ++N +KV A MP
Sbjct: 319 MDEMIEL---GFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGA----------MPS 365
Query: 191 -FYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISS------- 242
F N+ I SL D G+ D+ E L + +C N+ + +LI S
Sbjct: 366 LFVYNALINSLCKD--GKFDEAEL---LFKEMGEKGLCANDVTYS---ILIDSFCRRGKL 417
Query: 243 -------KALTKKGIWRVVEVLNQ-VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTER 294
+ GI V N + G C + + A + F EM +K T
Sbjct: 418 DTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFD-----EMIDKGLKPT-- 470
Query: 295 KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
V Y LI C + L EM G P T T+ ++ L + + DA L
Sbjct: 471 -VVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLF 529
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
+EML +N P+ +TY + I C+ G AF NQMV++GL P T+ I
Sbjct: 530 DEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCST 589
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
R +A K++ ++ + M YS L + K A V EM+K G+ ++ Y
Sbjct: 590 GRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCY 649
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 23/219 (10%)
Query: 208 LDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALT----KKGIWRVVEVL------ 257
+D Y + F ++ + ++E G P +++ L K G+ E+L
Sbjct: 688 IDGYSKAGSVKKAFGIWDIMIDE---GCTPNIVTYTTLINELCKAGLMDKAELLWKEMLV 744
Query: 258 -----NQVGGSCLVSGVRALIEMFSVLGLY-EMAKYVIKKTERKVSYYNILIKEMCRRCD 311
N V C + + M + L+ +M K ++ T VSY NIL++ C+
Sbjct: 745 SNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLKGLLANT---VSY-NILVRGFCKLGR 800
Query: 312 FKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEI 371
+ LL EM P +TY+ ++ C+ G A E + ML + PD + Y
Sbjct: 801 VEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNF 860
Query: 372 FIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
I C G+ AF + M++RG++P ATH + G
Sbjct: 861 LIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHG 899
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 79/183 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN++I+ C+ + +LL +M Q G P T TY ++ LC G+ +A + ++++
Sbjct: 544 YNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLH 603
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ + + Y + C+ G+ A +MVKRG+ L +A I G
Sbjct: 604 REHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTS 663
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ + D+ ++Y+ + + K + A + M+ G PN+ Y ++
Sbjct: 664 AVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLI 723
Query: 479 KHL 481
L
Sbjct: 724 NEL 726
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 92/201 (45%), Gaps = 9/201 (4%)
Query: 283 EMAKYVIKK--TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
E+ +I+K T +V+Y +++ +C+ +F+ ++ EM ++G P + ++
Sbjct: 282 EIKNGLIQKGLTASEVTYCTLVLG-LCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEG 340
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
L + G+ DA +L+ + P Y I C+ GKFD A F +M ++GL
Sbjct: 341 LRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCAN 400
Query: 401 LATHAAFIKGYFIFYRYEDAYKYV---VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKN 457
T++ I + + + A ++ +++ K Y+ L + H K N A +
Sbjct: 401 DVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYP---YNSLINGHCKLGNLSAAVS 457
Query: 458 VLSEMMKNGLRPNVSVYRRVL 478
EM+ GL+P V Y ++
Sbjct: 458 FFDEMIDKGLKPTVVSYTSLI 478
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 77/176 (43%), Gaps = 2/176 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +I+ C +F ++++ M + YN ++ LCKN + +A E+ ++
Sbjct: 231 YVAVIRSFCELKNFAKAKEMIQRMESSDLN--VVVYNVLIHGLCKNKRVWEAVEIKNGLI 288
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ +TY ++ C+V +F+V ++M++ G P A ++ ++G +
Sbjct: 289 QKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVV 348
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
DA+ V S +Y+ L + K+ A+ + EM + GL N Y
Sbjct: 349 DAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTY 404
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 87/225 (38%), Gaps = 9/225 (4%)
Query: 257 LNQVGGSCLVSGVRALIEMFSVLGL-YEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGP 315
LN++ S L+ G + LG+ EM K + + + Y +LI + D
Sbjct: 609 LNEMCYSALLHGYCKEGRLRDALGVCREMVK---RGVDMDLVCYAVLIDGTIKEQDTSAV 665
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
LL M P + Y ++ K G A + + M+ C P+ +TY I
Sbjct: 666 FGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINE 725
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKS-- 433
C+ G D A + +M+ P T+ F+ R K V L D K
Sbjct: 726 LCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDH---LAREGSMEKAVQLHNDMLKGLL 782
Query: 434 SSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
++ + Y++L K A +L EM+ N + P+ Y ++
Sbjct: 783 ANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTII 827
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 100/237 (42%), Gaps = 10/237 (4%)
Query: 252 RVVEVLNQVGGSCLVSGVR-------ALIEMFSVLGLYEMAKYVIKKTER---KVSYYNI 301
R V+++ + G L G+R A+I F L + AK +I++ E V YN+
Sbjct: 207 RRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDLNVVVYNV 266
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
LI +C+ ++ + Q G +TY ++ LCK + +++EM+
Sbjct: 267 LIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELG 326
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
P + R GK AF+ N++ K G P L + A I ++++A
Sbjct: 327 FVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAE 386
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+K ++++ YS+L + A + L +M+ G++ V Y ++
Sbjct: 387 LLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLI 443
>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
Length = 987
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 84/183 (45%), Gaps = 7/183 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +LIK +C+ R LL EM G P TYN ++ CK+G+ DA + M
Sbjct: 287 YTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALME 346
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C+PD TY I C GK D A N + RG P + T I GY R +
Sbjct: 347 QNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERID 405
Query: 419 DAYKYVVLSADKYKSSSNM---LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
DA + + ++ S+ + Y +L ++ K AK L+EM NGL PNV +Y
Sbjct: 406 DALR---VKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYT 462
Query: 476 RVL 478
++
Sbjct: 463 SII 465
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 122/305 (40%), Gaps = 50/305 (16%)
Query: 203 DNCGRLDDYETMRQLLNDFNVYQVCLN--------EKAFGFLPVLISSKALTKKGIWRVV 254
DN RL + L D Y V + E+A+ FL +KG+
Sbjct: 545 DNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---------VRKGV---- 591
Query: 255 EVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNILIKEMCRR 309
VL +V + LV G FS G + A +I+K + + Y++L++ +C++
Sbjct: 592 -VLTKVTYTSLVDG-------FSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQ 643
Query: 310 CDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITY 369
+L +M G + + Y ++ + K G+ A L EM+ P A TY
Sbjct: 644 KKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTY 703
Query: 370 EIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSAD 429
+FI C++G+ + A + +M + G+ P + T+ FI G + A+ + D
Sbjct: 704 TVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVD 763
Query: 430 KYKSSSNMLYSLL-----------ASLHDKNN--NPVMAKNV---LSEMMKNGLRPNVSV 473
+ Y LL A D + N + V L MMK+GL P V
Sbjct: 764 ASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVT 823
Query: 474 YRRVL 478
Y ++
Sbjct: 824 YSSII 828
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 81/218 (37%), Gaps = 38/218 (17%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +LI + ++C K ++ L EM G P + Y ++ CK G A E+ + M
Sbjct: 426 YGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLME 485
Query: 359 GRNCHPDA-----------------------------------ITYEIFIVYSCRVGKFD 383
CHP+A I Y I C+ +FD
Sbjct: 486 HEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFD 545
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
AF F M K GL P + R E+AY ++V K + + Y+ L
Sbjct: 546 NAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLV---RKGVVLTKVTYTSLV 602
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K N A ++ +M+ G + ++ Y +L+ L
Sbjct: 603 DGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQAL 640
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
LL M + G P +TY+ ++ CK + +AC LL+ MLG+ P+ Y + I C
Sbjct: 808 LLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCC 867
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ F +F M++ G QP+L ++ I G
Sbjct: 868 DIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVG 900
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 89/236 (37%), Gaps = 55/236 (23%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y I+I EM + + L EM G +P TY + CK GQ +A L+ EM
Sbjct: 668 YTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEME 727
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV------------------------- 393
PD +TY IFI +G D AF+ +MV
Sbjct: 728 RDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLIN 787
Query: 394 --------------------------KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLS 427
K GL P + T+++ I G+ R E+A +
Sbjct: 788 AHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHM 847
Query: 428 ADKYKSSSNMLYSLLASLHDKNNNPVMAKNV--LSEMMKNGLRPNVSVYRRVLKHL 481
K S + +Y++L + + + K+V +++M++ G +P + Y ++ L
Sbjct: 848 LGKAISPNEEIYTML--IKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGL 901
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 87/238 (36%), Gaps = 60/238 (25%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN +I C+ K + M Q GC P TYN ++ LC G+ +A ELL
Sbjct: 319 VWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLN 377
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF--------------------------- 388
+ R P IT+ I C+ + D A
Sbjct: 378 GAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKC 437
Query: 389 --------FNQMVKRGLQPRLATHAAFIKGY------------FIFYRYEDAYKYVVLSA 428
N+M GL P + + + I GY F +E + +A
Sbjct: 438 RLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHP----NA 493
Query: 429 DKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
Y S ++Y L + DK + MA ++++M ++G+ P V Y +++ H+
Sbjct: 494 WTYGS---LIYGL---IQDKKLHKAMA--LITKMQEDGITPGVIAYTTLIQGQCKKHE 543
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 99/275 (36%), Gaps = 56/275 (20%)
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVS--------YYNILIK 304
++ + +VGG LV + L ++M +Y+ K V YN +I
Sbjct: 128 AIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIM 187
Query: 305 EMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHP 364
C++ +R+ G + T T N +L C+ AC LL M C
Sbjct: 188 AYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRR 247
Query: 365 DAITYEIFI-----------------------------VYS------CRVGKFDVAFNFF 389
+ +Y I I +Y+ C+ G+ A
Sbjct: 248 NEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLL 307
Query: 390 NQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL------SADKYKSSSNMLYSLLA 443
++M RG+ P + T+ A I GY R +DA L + D + +S ++Y L
Sbjct: 308 DEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNS-LIYGLCG 366
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
D+ A+ +L+ + G P V + ++
Sbjct: 367 GKLDE------AEELLNGAIARGFTPTVITFTNLI 395
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 5/206 (2%)
Query: 279 LGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLT 333
+G MA ++KK E K V Y+ +I +C+ + L EM G P +T
Sbjct: 95 MGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVT 154
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
Y+ +L C G+ +A L ++M+ RN PD +T+ I + + G A F M+
Sbjct: 155 YSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMI 214
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPV 453
++G++P + T+ A + GY + ++A K + K + S Y++L H K+
Sbjct: 215 EKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRID 274
Query: 454 MAKNVLSEMMKNGLRPNVSVYRRVLK 479
AK +L+EM L P+ Y ++K
Sbjct: 275 EAKGLLAEMSHKALTPDTVTYSTLMK 300
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 122/277 (44%), Gaps = 18/277 (6%)
Query: 243 KALTKKGIWRVVEVLNQV-GGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNI 301
+ + +KG+ V N + G C S + ++F+++ V K V YNI
Sbjct: 211 ETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIM--------VRKGCAPSVRSYNI 262
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
LIK C+ + LL EM P T+TY+ ++ C++G+ DA +LLEEM
Sbjct: 263 LIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYG 322
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
PD +TY I + C+ G D AF M + ++P + + I+G F + E A
Sbjct: 323 LLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAAR 382
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV---- 477
+ K + Y+++ S K A + +M +G PN Y +
Sbjct: 383 ELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGF 442
Query: 478 LKHLHTSH-----QEHMAKCLSSRYSSLSLGSSVEAR 509
L++ TS+ +E + + S+ S+ + S +E+R
Sbjct: 443 LRNGDTSNAGRLIEEMVGRGFSADSSTFQMLSDLESR 479
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 80/196 (40%), Gaps = 35/196 (17%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
+L M ++G +P +T++ +L L + DA +L +EM+ PD ITY I C
Sbjct: 34 VLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLC 93
Query: 378 RVGKFDVAFN-----------------------------------FFNQMVKRGLQPRLA 402
++G +A F ++MV RG+ P +
Sbjct: 94 KMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVV 153
Query: 403 THAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM 462
T+++ + G+ R +A ++ + +++L K + A+ V M
Sbjct: 154 TYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETM 213
Query: 463 MKNGLRPNVSVYRRVL 478
++ G+ PNV+ Y ++
Sbjct: 214 IEKGVEPNVNTYNALM 229
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 61/152 (40%), Gaps = 2/152 (1%)
Query: 329 PITLTYNYVLGVLCKNGQDAD--ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
P T ++ C + D A +L M P+ +T+ + K A
Sbjct: 8 PDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAV 67
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
F++MVK G +P + T++ I G A + + +K + ++YS +
Sbjct: 68 KLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSL 127
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
K+ A LSEM+ G+ PNV Y +L
Sbjct: 128 CKDKLITEAMEFLSEMVNRGISPNVVTYSSIL 159
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 89/190 (46%), Gaps = 2/190 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQ-VGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
YN +I C R + D++ EMR+ G P TY V+ CK G+ +A ++ +EM
Sbjct: 517 YNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEM 576
Query: 358 LGRN-CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
L + P+A+ Y I C GK D A + ++MV+RG+ +AT+ + F+ R
Sbjct: 577 LTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGR 636
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
+AY+ V K + Y++L + H K N A + M + G+R V Y
Sbjct: 637 GTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTA 696
Query: 477 VLKHLHTSHQ 486
++ L Q
Sbjct: 697 LIYALSKKGQ 706
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 106/227 (46%), Gaps = 8/227 (3%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+ G C V+ +E+F M++ ++ T V Y LI + ++ + L
Sbjct: 663 INGHCKEGNVKKALEIFE-----NMSRRGVRAT---VVTYTALIYALSKKGQVQETDKLF 714
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
E + G P + YN ++ +G A E++ EM + PD +TY + C +
Sbjct: 715 DEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLL 774
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
G+ D A ++M +RG+QP L T+ I GY + +DA + +K + + + Y
Sbjct: 775 GRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTY 834
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
+ L KN A+N++ EM++NG+ P+ S Y +++ L T +
Sbjct: 835 NALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 881
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 13/225 (5%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGP---R 316
+ G C V V +++F + + K +K + YN LI C + R
Sbjct: 557 ISGWCKVGRVDEAVKVFDEM----LTKGEVKP---EAVMYNALIGGYCDQGKLDTALLYR 609
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
D +VE G TYN ++ L +G+ +A EL+EEM G+ PD TY I I
Sbjct: 610 DRMVER---GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGH 666
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
C+ G A F M +RG++ + T+ A I + ++ K + +
Sbjct: 667 CKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDL 726
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+LY+ L + H + N A ++ EM K + P+ Y +++ L
Sbjct: 727 VLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGL 771
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 7/122 (5%)
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN 390
T T+N +L LC G+ A A ELL +M P+A+TY I C G+ A +
Sbjct: 483 TTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMR 538
Query: 391 QMVKR-GLQPRLATHAAFIKGYFIFYRYEDAYKYV--VLSADKYKSSSNMLYSLLASLHD 447
+M +R G+ P T+ I G+ R ++A K +L+ + K + M +L+ D
Sbjct: 539 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 598
Query: 448 KN 449
+
Sbjct: 599 QG 600
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 96/207 (46%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
M + K V +N+LI +CR+ + ++L ++ + GC P +L+YN +L CK
Sbjct: 288 MGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCK 347
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
+ A L+ M+ R C+PD ++Y + CR G+ DVA +Q+ +G P L +
Sbjct: 348 QKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLIS 407
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
+ I G + ++A + + K + YS +A+ + + A ++
Sbjct: 408 YNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQ 467
Query: 464 KNGLRPNVSVYRRVLKHLHTSHQEHMA 490
G+RPN +Y ++ L + H A
Sbjct: 468 DMGIRPNTVLYNAIILGLCKRRETHSA 494
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 84/183 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ C++ L M GC P ++YN +L LC++G+ A ELL ++
Sbjct: 338 YNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLK 397
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C P I+Y I + GK A N+MV +GLQP + T++ G R E
Sbjct: 398 DKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIE 457
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA + D + +LY+ + K A ++ + M+ NG PN S Y ++
Sbjct: 458 DAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILI 517
Query: 479 KHL 481
+ L
Sbjct: 518 EGL 520
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 2/205 (0%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
+ ER + LI+ +C R +L EM + C P +TY +L CK
Sbjct: 154 RAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQ 213
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A +LL+EM + C PD +TY + + C+ G+ D A F + G +P ++ +K
Sbjct: 214 AMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLK 273
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
G R+EDA + + K + + +++L S + A VL ++ K G P
Sbjct: 274 GLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSP 333
Query: 470 NVSVYRRVLKHLHTSHQEHMAKCLS 494
N Y +L Q+ M K ++
Sbjct: 334 NSLSYNPLLHAF--CKQKKMDKAMA 356
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 91/221 (41%), Gaps = 35/221 (15%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ YN+++ +C+ + L + GCEP T++YN VL LC + DA EL+
Sbjct: 230 IVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMG 289
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP---------------- 399
EM + C P+ +T+ + I + CR G + A Q+ K G P
Sbjct: 290 EMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQK 349
Query: 400 RLATHAAFIKGYFIFYRYEDAYKY-VVLSADKYKSSSNMLYSLLASLHDKNNNPVM---- 454
++ AF+ Y D Y +L+A ++ LL L DK PV+
Sbjct: 350 KMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYN 409
Query: 455 --------------AKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A +L+EM+ GL+P++ Y + L
Sbjct: 410 TVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGL 450
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 84/197 (42%), Gaps = 22/197 (11%)
Query: 230 EKAFGFLPVLISS-------------KALTKKGIWRV-VEVLNQV---GGSCLVSGVRAL 272
+KA FL +++S AL + G V VE+L+Q+ G + ++ +
Sbjct: 352 DKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTV 411
Query: 273 IEMFSVLG-----LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGC 327
I+ + G L + + V K + + Y+ + +CR + +++ +G
Sbjct: 412 IDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGI 471
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
P T+ YN ++ LCK + A +L M+G C P+ TY I I G A +
Sbjct: 472 RPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARD 531
Query: 388 FFNQMVKRGLQPRLATH 404
+++ RG + L H
Sbjct: 532 LLDELCSRGEEILLDVH 548
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 96/207 (46%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
M + K V +N+LI +CR+ + ++L ++ + GC P +L+YN +L CK
Sbjct: 160 MGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCK 219
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
+ A L+ M+ R C+PD ++Y + CR G+ DVA +Q+ +G P L +
Sbjct: 220 QKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLIS 279
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
+ I G + ++A + + K + YS +A+ + + A ++
Sbjct: 280 YNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQ 339
Query: 464 KNGLRPNVSVYRRVLKHLHTSHQEHMA 490
G+RPN +Y ++ L + H A
Sbjct: 340 DMGIRPNTVLYNAIILGLCKRRETHSA 366
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 100/226 (44%), Gaps = 4/226 (1%)
Query: 271 ALIEMFSVLGLYEMAKYVIKK--TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCE 328
A++ + G + A+ ++ + E YN LI+ +C R +L EM + C
Sbjct: 5 AMVAGYCGAGQLDAARRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCV 64
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P +TY +L CK A +LL+EM + C PD +TY + + C+ G+ D A F
Sbjct: 65 PDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEF 124
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
+ G +P ++ +KG R+EDA + + K + + +++L S +
Sbjct: 125 LKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCR 184
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLS 494
A VL ++ K G PN Y +L Q+ M K ++
Sbjct: 185 KGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAF--CKQKKMDKAMA 228
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 84/183 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ C++ L M GC P ++YN +L LC++G+ A ELL ++
Sbjct: 210 YNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLK 269
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C P I+Y I + GK A N+MV +GLQP + T++ G R E
Sbjct: 270 DKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIE 329
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA + D + +LY+ + K A ++ + M+ NG PN S Y ++
Sbjct: 330 DAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILI 389
Query: 479 KHL 481
+ L
Sbjct: 390 EGL 392
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 85/187 (45%), Gaps = 11/187 (5%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++ C R L+ EM EP TYN ++ LC G+ A+A +L+EML
Sbjct: 3 YNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEML 59
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R C PD +TY I + +C+ + A ++M +G P + T+ + G R +
Sbjct: 60 RRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVD 119
Query: 419 DAYKYV----VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
DA +++ + S N++ L + + A+ ++ EM + G PNV +
Sbjct: 120 DAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWED----AEELMGEMGQKGCPPNVVTF 175
Query: 475 RRVLKHL 481
++ L
Sbjct: 176 NMLISFL 182
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 90/218 (41%), Gaps = 35/218 (16%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+++ +C+ + L + GCEP T++YN VL LC + DA EL+ EM
Sbjct: 105 YNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMG 164
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP----------------RLA 402
+ C P+ +T+ + I + CR G + A Q+ K G P ++
Sbjct: 165 QKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMD 224
Query: 403 THAAFIKGYFIFYRYEDAYKY-VVLSADKYKSSSNMLYSLLASLHDKNNNPVM------- 454
AF+ Y D Y +L+A ++ LL L DK PV+
Sbjct: 225 KAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVI 284
Query: 455 -----------AKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A +L+EM+ GL+P++ Y + L
Sbjct: 285 DGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGL 322
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 80/188 (42%), Gaps = 22/188 (11%)
Query: 230 EKAFGFLPVLISS-------------KALTKKGIWRV-VEVLNQV---GGSCLVSGVRAL 272
+KA FL +++S AL + G V VE+L+Q+ G + ++ +
Sbjct: 224 DKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTV 283
Query: 273 IEMFSVLG-----LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGC 327
I+ + G L + + V K + + Y+ + +CR + +++ +G
Sbjct: 284 IDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGI 343
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
P T+ YN ++ LCK + A +L M+G C P+ TY I I G A +
Sbjct: 344 RPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARD 403
Query: 388 FFNQMVKR 395
+++ R
Sbjct: 404 LLDELCSR 411
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 101/230 (43%)
Query: 277 SVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNY 336
S L L K + + V Y+I+I +C+ F L EM G + +TY+
Sbjct: 255 SALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSS 314
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
++G LC +G+ D ++L EM+GRN PD +T+ I + GK A +N+M+ RG
Sbjct: 315 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG 374
Query: 397 LQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAK 456
+ P T+ + I G+ +A + L K + YS+L + + K
Sbjct: 375 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGM 434
Query: 457 NVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
+ E+ GL PN Y ++ S + + AK L S + SV
Sbjct: 435 RLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV 484
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 6/191 (3%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
LI +C + L+ M + G +P +TY VL LCK+G A A +L +M RN
Sbjct: 210 LINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERN 269
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
+ Y I I C+ G FD A + FN+M +G++ + T+++ I G +++D
Sbjct: 270 IKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGA 329
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKH- 480
K + + + +S L + K + AK + +EM+ G+ P+ Y ++
Sbjct: 330 KMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGF 389
Query: 481 -----LHTSHQ 486
LH ++Q
Sbjct: 390 CKENCLHEANQ 400
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 1/198 (0%)
Query: 288 VIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQD 347
V K E + Y+ILI C+ L E+ G P T+TYN ++ C++G+
Sbjct: 406 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL 465
Query: 348 ADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAF 407
A EL +EM+ R P +TY I + C G+ + A F +M K + + +
Sbjct: 466 NAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII 525
Query: 408 IKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
I G + +DA+ +DK + Y+++ K + A + +M ++G
Sbjct: 526 IHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 585
Query: 468 RPNVSVYRRVLK-HLHTS 484
P+ Y +++ HL S
Sbjct: 586 TPDDFTYNILIRAHLGGS 603
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 53/116 (45%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E + I+I CR+ +L ++G EP T+T++ ++ C G+ ++A
Sbjct: 131 EHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVA 190
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
L++ M+ PD +T I C G+ A ++MV+ G QP T+ +
Sbjct: 191 LVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVL 246
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y LI +C+ D +LL EM ++G +P TYN ++ LCK+G +A +L+
Sbjct: 456 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 515
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
E + D +TY + C+ G+ D A +M+ +GLQP + T + G+ +
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
ED K + K + + ++ L + NN A + +M G+ P+ Y
Sbjct: 576 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYE 635
Query: 476 RVLK 479
++K
Sbjct: 636 NLVK 639
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 104/244 (42%), Gaps = 4/244 (1%)
Query: 263 SCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSY-YNILIKEMCRRCDFKGPRDLLVE 321
S +V+G E+ V L E+ K +K + SY Y +I +CR C + E
Sbjct: 285 STVVNGYCRFGELDKVWKLIEVMK---RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSE 341
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M + G P T+ Y ++ CK G A + EM R+ PD +TY I C++G
Sbjct: 342 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 401
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
A F++M +GL+P T I GY +DA++ S + + Y+
Sbjct: 402 MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTT 461
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLS 501
L K + A +L EM K GL+PN+ Y ++ L S A L + +
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521
Query: 502 LGSS 505
L +
Sbjct: 522 LNAD 525
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 75/176 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ C+ + +++L EM G +P +T+N ++ C +G D +LL ML
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+A T+ + C A + M RG+ P T+ +KG+ +
Sbjct: 589 AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMK 648
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+A+ K S S YS+L K + A+ V +M + GL + ++
Sbjct: 649 EAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 101/230 (43%)
Query: 277 SVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNY 336
S L L K + + V Y+I+I +C+ F L EM G + +TY+
Sbjct: 226 SALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSS 285
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
++G LC +G+ D ++L EM+GRN PD +T+ I + GK A +N+M+ RG
Sbjct: 286 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG 345
Query: 397 LQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAK 456
+ P T+ + I G+ +A + L K + YS+L + + K
Sbjct: 346 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGM 405
Query: 457 NVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
+ E+ GL PN Y ++ S + + AK L S + SV
Sbjct: 406 RLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV 455
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 6/191 (3%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
LI +C + L+ M + G +P +TY VL LCK+G A A +L +M RN
Sbjct: 181 LINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERN 240
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
+ Y I I C+ G FD A + FN+M +G++ + T+++ I G +++D
Sbjct: 241 IKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGA 300
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKH- 480
K + + + +S L + K + AK + +EM+ G+ P+ Y ++
Sbjct: 301 KMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGF 360
Query: 481 -----LHTSHQ 486
LH ++Q
Sbjct: 361 CKENCLHEANQ 371
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 1/198 (0%)
Query: 288 VIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQD 347
V K E + Y+ILI C+ L E+ G P T+TYN ++ C++G+
Sbjct: 377 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL 436
Query: 348 ADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAF 407
A EL +EM+ R P +TY I + C G+ + A F +M K + + +
Sbjct: 437 NAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII 496
Query: 408 IKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
I G + +DA+ +DK + Y+++ K + A + +M ++G
Sbjct: 497 IHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 556
Query: 468 RPNVSVYRRVLK-HLHTS 484
P+ Y +++ HL S
Sbjct: 557 TPDDFTYNILIRAHLGGS 574
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 53/116 (45%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E + I+I CR+ +L ++G EP T+T++ ++ C G+ ++A
Sbjct: 102 EHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVA 161
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
L++ M+ PD +T I C G+ A ++MV+ G QP T+ +
Sbjct: 162 LVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVL 217
>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
Length = 1010
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 95/216 (43%), Gaps = 5/216 (2%)
Query: 271 ALIEMFSVLGLYEMAKYVIKK-----TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
L+ F+ LG + K K + V YNI+I MC+ D + R L EM+
Sbjct: 65 GLLHKFAKLGKTDGVKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFR 124
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P T+TYN ++ K G+ D EEM C PD ITY I C+ GK
Sbjct: 125 GLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKG 184
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
FF +M + GL+P + +++ + + + A K+ V + Y+ L
Sbjct: 185 LEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDA 244
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ K N A + +EM++ G+ NV Y ++ L
Sbjct: 245 YCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGL 280
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 85/230 (36%), Gaps = 44/230 (19%)
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVL---GLYEMAKYVIKKTER-----KVSYYNILIK 304
V +VL C V G +FSVL G+ E A K +R K N L+
Sbjct: 10 VFDVLWSTRNVC-VPGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLH 68
Query: 305 EMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHP 364
+ + G + +M G +P TYN ++ +CK G A L EEM R P
Sbjct: 69 KFAKLGKTDGVKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIP 128
Query: 365 DAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV 424
D +TY I +VG+ D FF +M +P + T+ A I + F + ++
Sbjct: 129 DTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEF- 187
Query: 425 VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
EM +NGL+PNV Y
Sbjct: 188 ----------------------------------FREMKRNGLKPNVVSY 203
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 83/214 (38%), Gaps = 6/214 (2%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI F G ++ +R V Y+ L+ C+ + V+MR+V
Sbjct: 170 ALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRV 229
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P TY ++ CK G +DA L EML + +TY I C
Sbjct: 230 GLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEG 289
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN-MLYSLLAS 444
+ ++MV+ ++ + T I G A Y ++ + +N +Y+ +
Sbjct: 290 LHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMID 349
Query: 445 LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
K N A + +M + GL P+ + Y ++
Sbjct: 350 GLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLM 383
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 78/192 (40%), Gaps = 9/192 (4%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V Y LI +C + LL EM ++ + +T+ ++ LCKN + A +
Sbjct: 267 EWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAID 326
Query: 353 LLEEMLGR-NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
+ +A Y I C+ + + A F QM ++GL P + + + G
Sbjct: 327 YFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGN 386
Query: 412 FIFYRYEDAYKYVVLSADKYKSSSNML----YSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
F + + + + L DK + L Y+ L N A++ L EM+ G+
Sbjct: 387 F---KQGNVLEALALR-DKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGI 442
Query: 468 RPNVSVYRRVLK 479
P+ + VLK
Sbjct: 443 HPDEVLCISVLK 454
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 95/213 (44%)
Query: 279 LGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
L L + K K E V YN +I +C+ DL +M G +P TYN ++
Sbjct: 239 LALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLI 298
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
LC G+ +DA LL +M+ R +P+ +T+ I + GK A F++M++R +
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 358
Query: 399 PRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNV 458
P + T+ + I G+ + R ++A + L K + Y+ L K +
Sbjct: 359 PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMEL 418
Query: 459 LSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
EM + GL N Y +++ L + MA+
Sbjct: 419 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 451
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 76/161 (47%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L+ M GC+P TY V+ LCK G A LL++M + + Y I C
Sbjct: 208 LIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLC 267
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ D AF+ FN+M +G++P + T+ + I + R+ DA + + ++ + + +
Sbjct: 268 KYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVV 327
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
++ L K + A+ + EM++ + PN+ Y ++
Sbjct: 328 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLI 368
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 84/184 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LIK C+ + +L EM Q G T+TYN ++ L + G A ++ +
Sbjct: 396 VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFK 455
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M+ PD ITY I + C+ GK + A F + K ++P + T+ I+G
Sbjct: 456 KMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAG 515
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ ED + + K + ++Y+ + S + A + EM ++G P+ Y
Sbjct: 516 KVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYN 575
Query: 476 RVLK 479
+++
Sbjct: 576 TLIR 579
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 66/161 (40%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M+ +G TY+ +L C+ Q A +L +M+ PD +T + C
Sbjct: 106 QMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGK 165
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+ A +QMV+ G +P T I G F+ + +A + + Y
Sbjct: 166 RISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYG 225
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + K + +A ++L +M K + NV +Y ++ L
Sbjct: 226 TVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGL 266
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 41/102 (40%)
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
K E + YNI+I+ MC+ + DL + G +P + Y ++ C+ G +A
Sbjct: 496 KMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 555
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
L EM PD+ Y I R G + +M
Sbjct: 556 DALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEM 597
Score = 38.5 bits (88), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 67/156 (42%), Gaps = 6/156 (3%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P + ++ +L + K + L E+M + TY I + CR + +A
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAV 138
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSAD-KYKSSSNMLYSLLAS--L 445
+M+K G +P + T ++ + GY R +A V + YK + +L+ L
Sbjct: 139 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFL 198
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
H+K + V ++ M+ G +P++ Y V+ L
Sbjct: 199 HNKASEAVA---LIDRMVARGCQPDLFTYGTVVNGL 231
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 89/190 (46%), Gaps = 2/190 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQ-VGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
YN +I C R + D++ EMR+ G P TY V+ CK G+ +A ++ +EM
Sbjct: 522 YNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEM 581
Query: 358 LGRN-CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
L + P+A+ Y I C GK D A + ++MV+RG+ +AT+ + F+ R
Sbjct: 582 LTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGR 641
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
+AY+ V K + Y++L + H K N A + M + G+R V Y
Sbjct: 642 GTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTA 701
Query: 477 VLKHLHTSHQ 486
++ L Q
Sbjct: 702 LIYALSKKGQ 711
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 106/227 (46%), Gaps = 8/227 (3%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+ G C V+ +E+F M++ ++ T V Y LI + ++ + L
Sbjct: 668 INGHCKEGNVKKALEIFE-----NMSRRGVRAT---VVTYTALIYALSKKGQVQETDKLF 719
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
E + G P + YN ++ +G A E++ EM + PD +TY + C +
Sbjct: 720 DEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLL 779
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
G+ D A ++M +RG+QP L T+ I GY + +DA + +K + + + Y
Sbjct: 780 GRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTY 839
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
+ L KN A+N++ EM++NG+ P+ S Y +++ L T +
Sbjct: 840 NALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 886
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 13/225 (5%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGP---R 316
+ G C V V +++F + + K +K + YN LI C + R
Sbjct: 562 ISGWCKVGRVDEAVKVFDEM----LTKGEVKP---EAVMYNALIGGYCDQGKLDTALLYR 614
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
D +VE G TYN ++ L +G+ +A EL+EEM G+ PD TY I I
Sbjct: 615 DRMVER---GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGH 671
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
C+ G A F M +RG++ + T+ A I + ++ K + +
Sbjct: 672 CKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDL 731
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+LY+ L + H + N A ++ EM K + P+ Y +++ L
Sbjct: 732 VLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGL 776
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 7/122 (5%)
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN 390
T T+N +L LC G+ A A ELL +M P+A+TY I C G+ A +
Sbjct: 488 TTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMR 543
Query: 391 QMVKR-GLQPRLATHAAFIKGYFIFYRYEDAYKYV--VLSADKYKSSSNMLYSLLASLHD 447
+M +R G+ P T+ I G+ R ++A K +L+ + K + M +L+ D
Sbjct: 544 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 603
Query: 448 KN 449
+
Sbjct: 604 QG 605
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 91/194 (46%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N LI +C+ + + LL +M + G +TYN ++ CK G+ + +L EM+
Sbjct: 562 NALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVK 621
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
+ PD TY + I CR+GK D A N +N+ R L P + T+ I GY + E+
Sbjct: 622 QGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEE 681
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
K + ++++Y+ L + +N N V A + +M G+ P + Y ++
Sbjct: 682 GEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIH 741
Query: 480 HLHTSHQEHMAKCL 493
+ + AKCL
Sbjct: 742 GMCNIGRMEDAKCL 755
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 117/270 (43%), Gaps = 16/270 (5%)
Query: 236 LPVLISSKALTKKGIWRVVEVLNQVGGSCL-VSGVRALIEMF----------SVLGLYE- 283
LPVL I + LN+VG S + V+ V LI ++ + +G++
Sbjct: 210 LPVLFGDPKNRHIEIASAMADLNEVGESGVAVAAVDLLIHVYCTQFRNVGFRNAIGVFRF 269
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
+A + T + ++ L+ + + + + + MRQ G P ++ + CK
Sbjct: 270 LANKGVFPTVKTCTF---LLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCK 325
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
G+ DA +L +M P+ +TY I C+ G D AF F +MVK G+ L T
Sbjct: 326 GGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLIT 385
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
++ I G ++ +A + + +K + + ++Y+ L + K N A + +M+
Sbjct: 386 YSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMV 445
Query: 464 KNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
G+ PN +++ Q A+C+
Sbjct: 446 SKGINPNSVTLNSIIQGFCKIGQMEQAECI 475
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 142/339 (41%), Gaps = 24/339 (7%)
Query: 150 KLLSMSVSLSNASVIEILRVL--NSEKVSALCFLKYM--REIMPEFYKNSDICSLVIDNC 205
++LS S++ + I+ L NS SAL FL+ M R + P + + +LV C
Sbjct: 478 EMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRP---NDGLLTTLVGGLC 534
Query: 206 --GRLDDYETM--RQLLNDFNVYQVCLNEKAFGFLPVLISSKA--LTKKGIWRVVEVLNQ 259
G+ D + R L F V N G +A L KK + R VL++
Sbjct: 535 KEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGF-VLDK 593
Query: 260 VGGSCLVSGV---RALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPR 316
+ + L+SG + E F + G EM K I E YN+LI MCR
Sbjct: 594 ITYNTLISGCCKEGKVEEGFKLRG--EMVKQGI---EPDTFTYNLLIHGMCRIGKLDEAV 648
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
+L E + P TY ++ CK + + +L E+L +N +++ Y I
Sbjct: 649 NLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAY 708
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
CR G AF + M +G+ P AT+++ I G R EDA K ++ K N
Sbjct: 709 CRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDA-KCLIDEMRKEGLLPN 767
Query: 437 ML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
++ Y+ L + K NVL EM + PN Y
Sbjct: 768 VVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITY 806
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 2/180 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y ++I C+ + L E+ E ++ YN ++ C+NG +A +L +
Sbjct: 663 VYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHD 722
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M + P TY I C +G+ + A ++M K GL P + + A I GY
Sbjct: 723 DMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLG 782
Query: 416 RYEDAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ D V+ Y N + Y+++ + K+ + A +L EM+ G+ P+ Y
Sbjct: 783 QM-DKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTY 841
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ Y+ LI MC + + L+ EMR+ G P + Y ++G CK GQ +L+
Sbjct: 733 TATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQ 792
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
EM + HP+ ITY + I + G A ++MV +G+ P T+ G+
Sbjct: 793 EMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGF 848
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 93/215 (43%), Gaps = 16/215 (7%)
Query: 267 SGVRALIEMFSVL--GLYEMAKY-----VIKKTERK-----VSYYNILIKEMCRRCDFKG 314
GV A + +SVL GL ++ K+ V+K+T K YN LI C+ +
Sbjct: 377 DGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGD 436
Query: 315 PRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIV 374
+ +M G P ++T N ++ CK GQ A +LEEML R + + I
Sbjct: 437 ALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIH 496
Query: 375 YSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSS 434
+ C +F+ A F +M+ R ++P + G ++ DA + +K +
Sbjct: 497 WLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGA 556
Query: 435 SNMLYSLLASLHD--KNNNPVMAKNVLSEMMKNGL 467
+ L + A +H K N A +L +M++ G
Sbjct: 557 N--LVTTNALIHGLCKTGNMQEAVRLLKKMLERGF 589
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 5/118 (4%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
+LI +G E AK +I + ++ V Y LI C+ ++L EM
Sbjct: 738 SLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSY 797
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
P +TY ++ K+G A +LL EM+G+ PD +TY + C+ GK +
Sbjct: 798 DIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIE 855
Score = 41.6 bits (96), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 5/118 (4%)
Query: 263 SCLVSGVRALIEMFSVLG-LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
+ L+ G L +M V+ L EM+ Y I K++Y ++I + D K LL E
Sbjct: 772 TALIGGYCKLGQMDKVVNVLQEMSSYDIHPN--KITY-TVMIDGYSKSGDMKTAAKLLHE 828
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
M G P T+TYN + CK G+ + L E+ +G N P + +E F + RV
Sbjct: 829 MVGKGIVPDTVTYNVLTNGFCKEGKIEEGKLLAEDGVGFN-SPLFLIHEAFRACTRRV 885
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 99/208 (47%), Gaps = 8/208 (3%)
Query: 280 GLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
GL + A +++K + + YN +I +C + + G LL +M+ GC+P +TY
Sbjct: 161 GLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTY 220
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N +L LC + DA EL++ M C PD +T+ I + C+ G A F QM
Sbjct: 221 NTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPD 280
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKS-SSNMLYSLLASLHDKNNNPV 453
+G P T++ I G + + A + + + +K + + +Y LLA + ++
Sbjct: 281 KGCTPNSITYSTIISGLAKATKLDQALE--LFNEMGHKGFNPDKIYQLLAECLNDDDTIE 338
Query: 454 MAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A + ++ +G+ P+ +Y +L L
Sbjct: 339 EAIQTVRKLQDSGISPHTVLYNAILLGL 366
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 81/184 (44%), Gaps = 2/184 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+L+ MC D +LL + GC+P T+ YN VL LC + DA EL+ EML
Sbjct: 80 YNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEML 139
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
NC P+ T+ + I CR G A +M K G + T+ A I G R
Sbjct: 140 RENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIING-LCEQRNV 198
Query: 419 DAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
D ++ Y +++ Y+ L V A+ ++ M +NG P+ + +
Sbjct: 199 DGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTL 258
Query: 478 LKHL 481
+ L
Sbjct: 259 IGFL 262
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 77/183 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++K +C + +L+ EM + C P T+N V+ LC+ G A +LLE+M
Sbjct: 115 YNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMS 174
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C + +TY I C D A ++M G +P + T+ +KG R+
Sbjct: 175 KHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWV 234
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA + + N+ ++ L + V A V +M G PN Y ++
Sbjct: 235 DAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTII 294
Query: 479 KHL 481
L
Sbjct: 295 SGL 297
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 81/201 (40%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C R + +L +M GC P +TYN +L CK A EL++ M
Sbjct: 10 YNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMR 69
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C P+ +TY + + C G D A + G +P + +KG R+
Sbjct: 70 AEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWG 129
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA + V + + ++++ + A +L +M K+G N+ Y ++
Sbjct: 130 DADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAII 189
Query: 479 KHLHTSHQEHMAKCLSSRYSS 499
L A L S+ S
Sbjct: 190 NGLCEQRNVDGAMGLLSKMKS 210
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 8/158 (5%)
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
+P TYN ++ LC+ GQ DA +L++ML R C PD +TY I + +C+ + A
Sbjct: 4 QPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAME 63
Query: 388 FFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV-LSADKYKSSS---NMLYSLLA 443
+ M G P T+ + G +DA + + L + K S+ N + L
Sbjct: 64 LIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLC 123
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
S + A +++EM++ PN + + V+ L
Sbjct: 124 SAERWGD----ADELVTEMLRENCPPNEATFNVVIYSL 157
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFI 373
+++ G P T+ YN +L LC+NG+ A +++ M+ C PD +TY I I
Sbjct: 346 KLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILI 398
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 54/146 (36%), Gaps = 34/146 (23%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N LI +C++ ++ +M GC P ++TY+ ++ L K + A EL EM
Sbjct: 255 FNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMG 314
Query: 359 GRNCHPDAI----------------------------------TYEIFIVYSCRVGKFDV 384
+ +PD I Y ++ CR GK +
Sbjct: 315 HKGFNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEF 374
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKG 410
A + MV G P T+ I+G
Sbjct: 375 AIDIMAYMVSSGCMPDDLTYVILIEG 400
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 86/186 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN +I +C+ ++L M + G P +TYN +L C +GQ +A L+
Sbjct: 231 VVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLK 290
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M PD +TY + + Y C+ G+ A F+ M KRGL+P + T+ ++GY
Sbjct: 291 KMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKG 350
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ + + L + ++S+L + K A V S+M + GL PN Y
Sbjct: 351 ALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYG 410
Query: 476 RVLKHL 481
V+ L
Sbjct: 411 AVIGIL 416
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 81/188 (43%), Gaps = 3/188 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEM---RQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
YNIL+K +C + +LL M R G P ++Y V+ K G A
Sbjct: 161 YNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYH 220
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EML R PD +TY I C+ D A N MVK G+ P T+ + + GY
Sbjct: 221 EMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSG 280
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ ++A ++ + YSLL KN + A+ + M K GL+P ++ Y
Sbjct: 281 QPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYG 340
Query: 476 RVLKHLHT 483
+L+ T
Sbjct: 341 TLLQGYAT 348
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 81/183 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C ++ +L++EM G T+ +N ++ CK G+ ++ +L E M+
Sbjct: 444 YNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMV 503
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ ITY I C GK D A + MV GL+P T++ I GY R E
Sbjct: 504 RIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRME 563
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA S + Y+++ + AK + + ++G + +S Y +L
Sbjct: 564 DALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIIL 623
Query: 479 KHL 481
L
Sbjct: 624 HGL 626
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 107/263 (40%), Gaps = 40/263 (15%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPI 330
AL+EM +L L M + I ++ILI ++ + +MRQ G P
Sbjct: 351 ALVEMHGLLDL--MVRNGIHPDH---YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPN 405
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA----- 385
+TY V+G+LCK+G+ DA E+M+ P I Y I C K++ A
Sbjct: 406 AVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELIL 465
Query: 386 -------------FN-----------------FFNQMVKRGLQPRLATHAAFIKGYFIFY 415
FN F MV+ G++P + T+ I GY +
Sbjct: 466 EMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAG 525
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ ++A K + + + YS L + + K + A + EM +G+ P++ Y
Sbjct: 526 KMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYN 585
Query: 476 RVLKHLHTSHQEHMAKCLSSRYS 498
+L+ L + + AK L R +
Sbjct: 586 IILQGLFQTRRTAAAKELYVRIT 608
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 80/187 (42%)
Query: 292 TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADAC 351
E V Y++L+ +C+ R + M + G +P TY +L G +
Sbjct: 297 VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMH 356
Query: 352 ELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
LL+ M+ HPD + I I + GK D A F++M ++GL P T+ A I
Sbjct: 357 GLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGIL 416
Query: 412 FIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
R EDA Y D+ S N++Y+ L N A+ ++ EM+ G+ N
Sbjct: 417 CKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNT 476
Query: 472 SVYRRVL 478
+ ++
Sbjct: 477 IFFNSII 483
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 84/184 (45%)
Query: 295 KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
+++ Y L++ + LL M + G P ++ ++ K G+ A +
Sbjct: 335 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVF 394
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
+M + +P+A+TY I C+ G+ + A +F QM+ GL P + + I G
Sbjct: 395 SKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTC 454
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
++E A + ++ D+ + + ++ + H K + ++ + M++ G++PNV Y
Sbjct: 455 NKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITY 514
Query: 475 RRVL 478
++
Sbjct: 515 NTLI 518
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 84/208 (40%), Gaps = 40/208 (19%)
Query: 288 VIKKTER-KVSYYNILIKEMCRRCDFKGPRDLLVE-MRQVGCEPITLTYNYVLGVLCKNG 345
VIKK R + L+K +C D+++ M ++GC P +YN +L LC
Sbjct: 113 VIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDEN 172
Query: 346 QDADACELLEEML---GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLA 402
+ +A ELL M G PD ++Y I + G D A++ +++M+ RG+ P +
Sbjct: 173 RSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVV 232
Query: 403 THAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM 462
T+ + I A DK A VL+ M
Sbjct: 233 TYNSIIAAL-----------------------------CKAQAMDK------AMEVLNTM 257
Query: 463 MKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
+KNG+ P+ Y +L +S Q A
Sbjct: 258 VKNGVMPDCMTYNSILHGYCSSGQPKEA 285
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 85/219 (38%), Gaps = 35/219 (15%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++N +I C+ L M ++G +P +TYN ++ C G+ +A +LL M
Sbjct: 478 FFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGM 537
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
+ P+ +TY I C++ + + A F +M G+ P + T+ ++G F R
Sbjct: 538 VSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRT 597
Query: 418 EDAYKYVV-------------------------LSADKYKSSSNM----------LYSLL 442
A + V L+ D + N+ ++++
Sbjct: 598 AAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIM 657
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K AK++ NGL PN YR + +++
Sbjct: 658 IDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENI 696
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 4/119 (3%)
Query: 364 PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY 423
PD TY I I CR G+ D+ F ++K+G + +KG R DA
Sbjct: 85 PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144
Query: 424 VVLSADKYKSSSNML-YS-LLASLHDKNNNPVMAK--NVLSEMMKNGLRPNVSVYRRVL 478
V+ + N+ Y+ LL L D+N + + +++++ G P+V Y V+
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVI 203
>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g07290, mitochondrial; Flags: Precursor
gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 880
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 113/248 (45%), Gaps = 4/248 (1%)
Query: 250 IWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRR 309
I ++ VL+ G+ L+ G + + L ++++ + VSY +ILI +C
Sbjct: 221 ILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSY-SILIHGLCEV 279
Query: 310 CDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITY 369
+ L +M + GC+P T TY ++ LC G A L +EM+ R C P+ TY
Sbjct: 280 GRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTY 339
Query: 370 EIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV-VLSA 428
+ I CR GK + A +MVK + P + T+ A I GY R A++ + V+
Sbjct: 340 TVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEK 399
Query: 429 DKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL-HTSHQE 487
K + L+ L + P A ++L M+ NGL P++ Y ++ L H
Sbjct: 400 RACKPNVRTFNELMEGLC-RVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMN 458
Query: 488 HMAKCLSS 495
K LSS
Sbjct: 459 TAYKLLSS 466
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 91/199 (45%), Gaps = 9/199 (4%)
Query: 245 LTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYE-MAKYVIKKTERKVSYYNILI 303
+ +KGI L++V G+ L+ GV + + L + E + K I T + N+++
Sbjct: 502 MLRKGIS-----LDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSL---NVIL 553
Query: 304 KEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH 363
+ + C K +L ++ ++G P +TY ++ L ++G + +LE M C
Sbjct: 554 DMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCL 613
Query: 364 PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY 423
P+ Y I I C+ G+ + A + M G+ P T+ +KGY + + A +
Sbjct: 614 PNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALET 673
Query: 424 VVLSADKYKSSSNMLYSLL 442
V ++ ++ +YS L
Sbjct: 674 VRAMVERGYELNDRIYSSL 692
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 78/192 (40%), Gaps = 13/192 (6%)
Query: 222 NVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGL 281
V +V A L L+ + LT V+ L+ + C V A++ + LGL
Sbjct: 520 GVCKVGKTRDALFILETLVKMRILTTPHSLNVI--LDMLSKGCKVKEELAMLGKINKLGL 577
Query: 282 YEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
V Y L+ + R D G +L M+ GC P Y ++ L
Sbjct: 578 VP-----------SVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGL 626
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
C+ G+ +A +LL M P+ +TY + + GK D A MV+RG +
Sbjct: 627 CQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELND 686
Query: 402 ATHAAFIKGYFI 413
+++ ++G+ +
Sbjct: 687 RIYSSLLQGFVL 698
>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 707
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 82/183 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNIL+K +CR +F LL EMRQ P ++YN V+ C+ + A +L EM
Sbjct: 145 YNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQ 204
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
G C +T+ I I C+ GK D A +M +GL+ L + + I+G+ +
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELD 264
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
++ S + Y+ L K A + MM+ G+RPNV Y ++
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLI 324
Query: 479 KHL 481
L
Sbjct: 325 DGL 327
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 83/183 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ ILI C+ LL EM+ G E + Y ++ C G+ L +E+L
Sbjct: 215 WGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVL 274
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R P AITY I C++G+ A F M++RG++P + T+ I G + +
Sbjct: 275 ERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTK 334
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + + L K + + + Y+++ + K++ A ++ M K RP+ Y +L
Sbjct: 335 EALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLL 394
Query: 479 KHL 481
L
Sbjct: 395 GGL 397
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 114/254 (44%), Gaps = 12/254 (4%)
Query: 248 KGIWRVVEVLNQVGGS-CLVSGVR--ALIEMFSVLGLYEMAKYVIKKTERK-----VSYY 299
K + + +++ N++ GS C S V LI+ F G + A ++K+ + K + Y
Sbjct: 191 KELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVY 250
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
LI+ C + + L E+ + G P +TYN ++ CK G+ +A E+ E M+
Sbjct: 251 TSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMME 310
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
R P+ TY I C VGK A N M+++ +P + T+ I D
Sbjct: 311 RGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVAD 370
Query: 420 AYKYVVLSADKYKSSSNMLY-SLLASLHDKNNNPVMAKNVLSEMMKNG--LRPNVSVYRR 476
A + V L + N+ Y SLL L K + +K +L M+K+ P+V +
Sbjct: 371 ALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASK-LLYLMLKDSSYTDPDVISFNA 429
Query: 477 VLKHLHTSHQEHMA 490
++ L ++ H A
Sbjct: 430 LIHGLCKGNRLHQA 443
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 52/125 (41%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +I C+ + LL +MR P YN +L LCK G A L EEM
Sbjct: 497 YTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQ 556
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD I++ I I S + G A + M GL P L T++ I + +
Sbjct: 557 RDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLD 616
Query: 419 DAYKY 423
+A +
Sbjct: 617 EAISF 621
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 8/156 (5%)
Query: 252 RVVEVLNQVGGSCLV---SGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILI 303
+ +E+ Q+ S +V +I+ F G+ +AK ++ K V YN L+
Sbjct: 477 KAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLL 536
Query: 304 KEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH 363
+C++ L EM++ P +++N ++ K G A LL M
Sbjct: 537 SSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLS 596
Query: 364 PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
PD TY I ++G D A +FF++M+ G +P
Sbjct: 597 PDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEP 632
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 5/121 (4%)
Query: 280 GLYEMAKYVIKKTERKVSY-----YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
G + A + ++ +R S+ +NI+I + D K LLV M G P TY
Sbjct: 543 GTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTY 602
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
+ ++ K G +A ++M+ PDA + + Y G+ D F ++V
Sbjct: 603 SKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVKKLVD 662
Query: 395 R 395
+
Sbjct: 663 K 663
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 93/195 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +N+LI +CR+ + ++L ++ + GC P +L+YN +L CK + A L+
Sbjct: 298 VVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLD 357
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+ R C+PD ++Y + CR G+ DVA +Q+ +G P L ++ I G
Sbjct: 358 LMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAG 417
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ ++A + + K + YS +A+ + + A ++ G+RPN +Y
Sbjct: 418 KTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYN 477
Query: 476 RVLKHLHTSHQEHMA 490
++ L + H A
Sbjct: 478 AIILGLCKRRETHSA 492
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 96/215 (44%), Gaps = 11/215 (5%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPI 330
ALI+ S G A+ V+ V YN ++ C R L+ EM EP
Sbjct: 101 ALIKKLSASGRTAEARRVLAACGPDVMAYNAMVAGYCGAGQLDAARRLVAEMP---VEPD 157
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN 390
TYN ++ LC G+ A+A +L+EML R C PD +TY I + +C+ + A +
Sbjct: 158 AYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLD 217
Query: 391 QMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV----VLSADKYKSSSNMLYSLLASLH 446
+M +G P + T+ + G R +DA +++ + S N++ L +
Sbjct: 218 EMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAE 277
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ A+ ++ EM + G PNV + ++ L
Sbjct: 278 RWED----AEELMGEMGQKGCPPNVVTFNMLISFL 308
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 100/226 (44%), Gaps = 4/226 (1%)
Query: 271 ALIEMFSVLGLYEMAKYVIKK--TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCE 328
A++ + G + A+ ++ + E YN LI+ +C R +L EM + C
Sbjct: 131 AMVAGYCGAGQLDAARRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCV 190
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P +TY +L CK A +LL+EM + C PD +TY + + C+ G+ D A F
Sbjct: 191 PDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEF 250
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
+ G +P ++ +KG R+EDA + + K + + +++L S +
Sbjct: 251 LKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCR 310
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLS 494
A VL ++ K G PN Y +L Q+ M K ++
Sbjct: 311 KGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAF--CKQKKMDKAMA 354
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 84/183 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ C++ L M GC P ++YN +L LC++G+ A ELL ++
Sbjct: 336 YNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLK 395
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C P I+Y I + GK A N+MV +GLQP + T++ G R E
Sbjct: 396 DKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIE 455
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA + D + +LY+ + K A ++ + M+ NG PN S Y ++
Sbjct: 456 DAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILI 515
Query: 479 KHL 481
+ L
Sbjct: 516 EGL 518
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 91/221 (41%), Gaps = 35/221 (15%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ YN+++ +C+ + L + GCEP T++YN VL LC + DA EL+
Sbjct: 228 IVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMG 287
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP---------------- 399
EM + C P+ +T+ + I + CR G + A Q+ K G P
Sbjct: 288 EMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQK 347
Query: 400 RLATHAAFIKGYFIFYRYEDAYKY-VVLSADKYKSSSNMLYSLLASLHDKNNNPVM---- 454
++ AF+ Y D Y +L+A ++ LL L DK PV+
Sbjct: 348 KMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYN 407
Query: 455 --------------AKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A +L+EM+ GL+P++ Y + L
Sbjct: 408 TVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGL 448
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 82/190 (43%), Gaps = 22/190 (11%)
Query: 230 EKAFGFLPVLISS-------------KALTKKGIWRV-VEVLNQV---GGSCLVSGVRAL 272
+KA FL +++S AL + G V VE+L+Q+ G + ++ +
Sbjct: 350 DKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTV 409
Query: 273 IEMFSVLG-----LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGC 327
I+ + G L + + V K + + Y+ + +CR + +++ +G
Sbjct: 410 IDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGI 469
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
P T+ YN ++ LCK + A +L M+G C P+ TY I I G A +
Sbjct: 470 RPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARD 529
Query: 388 FFNQMVKRGL 397
+++ RG+
Sbjct: 530 LLDELCSRGV 539
>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 641
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 88/184 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ ++ L+ CR + +LV++++ G EP + YN +LG + G+ DA +LL
Sbjct: 246 LRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLA 305
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM NC P+A ++ I I C+ K D A F +M G + + T+ I G+ +
Sbjct: 306 EMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWG 365
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ AY+ + K S + Y + H+K ++ EM K G P++++Y
Sbjct: 366 NTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYN 425
Query: 476 RVLK 479
+++
Sbjct: 426 TMIR 429
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 81/189 (42%), Gaps = 12/189 (6%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V Y LI C+ + ++L +M Q G +P L+Y ++ K + + E
Sbjct: 348 EADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECME 407
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
L+EEM C PD Y I C++G A + +M GL P L T+ + G+
Sbjct: 408 LIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFL 467
Query: 413 ---IFYRYEDAYKYVV----LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKN 465
D +K +V LSA +Y + + +LL + MAKN+ S M
Sbjct: 468 SQGCLVEACDYFKEMVERGLLSAPQYGTLKELTNALL-----RAEKLEMAKNMWSCMTTK 522
Query: 466 GLRPNVSVY 474
G NVS +
Sbjct: 523 GCELNVSAW 531
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 78/183 (42%), Gaps = 2/183 (1%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E + YN L+ + + DLL EM++V C P ++ ++ CK + +A
Sbjct: 278 EPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMR 337
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+ EM G C D +TY I C+ G D A+ + M+++G P ++ + +
Sbjct: 338 IFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHE 397
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNM-LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
E+ + ++ K ++ +Y+ + L K + A + EM GL P +
Sbjct: 398 KKEELEECME-LIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGL 456
Query: 472 SVY 474
Y
Sbjct: 457 DTY 459
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 3/159 (1%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
++L EM + GCEP + +L LCKNG +A L E+M R +P+ + +
Sbjct: 198 EVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVR-FNPNLRHFTSLLYGW 256
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
CR GK A + Q+ + G +P + + + GY + DA+ ++ K N
Sbjct: 257 CREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFD-LLAEMKKVNCGPN 315
Query: 437 ML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+++L K A + +EM +G +V Y
Sbjct: 316 AASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTY 354
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 89/190 (46%), Gaps = 2/190 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQ-VGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
YN +I C R + D++ EMR+ G P TY V+ CK G+ +A ++ +EM
Sbjct: 148 YNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEM 207
Query: 358 LGRN-CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
L + P+A+ Y I C GK D A + ++MV+RG+ +AT+ + F+ R
Sbjct: 208 LTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGR 267
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
+AY+ V K + Y++L + H K N A + M + G+R V Y
Sbjct: 268 GTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTA 327
Query: 477 VLKHLHTSHQ 486
++ L Q
Sbjct: 328 LIYALSKKGQ 337
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 106/227 (46%), Gaps = 8/227 (3%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+ G C V+ +E+F M++ ++ T V Y LI + ++ + L
Sbjct: 294 INGHCKEGNVKKALEIFE-----NMSRRGVRAT---VVTYTALIYALSKKGQVQETDKLF 345
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
E + G P + YN ++ +G A E++ EM + PD +TY + C +
Sbjct: 346 DEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLL 405
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
G+ D A ++M +RG+QP L T+ I GY + +DA + +K + + + Y
Sbjct: 406 GRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTY 465
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
+ L KN A+N++ EM++NG+ P+ S Y +++ L T +
Sbjct: 466 NALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 512
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 13/225 (5%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGP---R 316
+ G C V V +++F + + K +K + YN LI C + R
Sbjct: 188 ISGWCKVGRVDEAVKVFDEM----LTKGEVKP---EAVMYNALIGGYCDQGKLDTALLYR 240
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
D +VE G TYN ++ L +G+ +A EL+EEM G+ PD TY I I
Sbjct: 241 DRMVER---GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGH 297
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
C+ G A F M +RG++ + T+ A I + ++ K + +
Sbjct: 298 CKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDL 357
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+LY+ L + H + N A ++ EM K + P+ Y +++ L
Sbjct: 358 VLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGL 402
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 7/122 (5%)
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN 390
T T+N +L LC G+ A A ELL +M P+A+TY I C G+ A +
Sbjct: 114 TTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMR 169
Query: 391 QMVKR-GLQPRLATHAAFIKGYFIFYRYEDAYKYV--VLSADKYKSSSNMLYSLLASLHD 447
+M +R G+ P T+ I G+ R ++A K +L+ + K + M +L+ D
Sbjct: 170 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 229
Query: 448 KN 449
+
Sbjct: 230 QG 231
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 5/213 (2%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
+L++ F + E A+ IKK K V YN LI R C F +L EM +
Sbjct: 432 SLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKK 491
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G +P ++Y ++ LCK+ +A +L +M+ R P+A Y + I SC GK A
Sbjct: 492 GLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDA 551
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
F FF++MV R + P L T+ I G + +A K S + Y+ L S
Sbjct: 552 FRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISG 611
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ N A + M K+G++P ++ Y R++
Sbjct: 612 YSSAGNVQKALELYETMKKSGIKPTLNTYHRLI 644
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 57/112 (50%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y I+ + D K +L+ M++ G P YN V+G LCK + DA +L +EML
Sbjct: 185 YGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEML 244
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
R P+ ITY I C+VG+ + AFN +M ++P + T + + G
Sbjct: 245 DRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNG 296
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 73/177 (41%), Gaps = 6/177 (3%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN++I +C+ K L EM P +TYN ++ CK GQ +A + E
Sbjct: 217 VFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRE 276
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M N P IT+ + CR + A +M G P T+ G+
Sbjct: 277 RMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHL--- 333
Query: 416 RYEDAYKYVVLSADKYKSSSNMLY---SLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
+ + + LS + + +L S+L + K N A+ VL + ++NGL P
Sbjct: 334 KCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAP 390
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 128/324 (39%), Gaps = 60/324 (18%)
Query: 185 REIMPEFYKNSDICSLVIDN---CGRLDD----YETM--RQLLNDFNVYQVCLNE--KAF 233
R ++P N+ I +++ID G+L D ++ M R+++ Y + +N K
Sbjct: 526 RGVVP----NAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKG 581
Query: 234 GFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYE-MAKYVIKKT 292
+ + +T+KG+ V N L+SG + + L LYE M K IK T
Sbjct: 582 KVMEAENLASEITRKGLSFDVITYNS-----LISGYSSAGNVQKALELYETMKKSGIKPT 636
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
++ Y+ LI C + + EM Q+ P + YN ++ ++G AC
Sbjct: 637 ---LNTYHRLIAG-CGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACS 692
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
L M + PD +TY I+ + G+ N N M RGL P+ T+ I G+
Sbjct: 693 LHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHC 752
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
++ AY + Y+ EM +NG P+VS
Sbjct: 753 KLKDFDGAYVW-------YR----------------------------EMFENGFTPSVS 777
Query: 473 VYRRVLKHLHTSHQEHMAKCLSSR 496
+ ++ L + H A + S
Sbjct: 778 ICDNLITGLREEGRSHDADVICSE 801
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 67/149 (44%)
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G + + T + +L LCK G A E+L++ L P + + + C+VG + A
Sbjct: 352 GVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKA 411
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
+ +M GL+P T+ + +K + E+A K + +K + Y+ L
Sbjct: 412 YTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDG 471
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ ++ +L EM K GL+PNV Y
Sbjct: 472 YGRSCLFDRCFQILEEMEKKGLKPNVISY 500
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 93/239 (38%), Gaps = 29/239 (12%)
Query: 175 VSALCFLKYMREIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFG 234
V C +K M E ++ C + G L + ET L++ + + CL ++ F
Sbjct: 434 VKKFCEMKNMEE--------AEKCIKKMVEKGVLPNVETYNTLIDGYG--RSCLFDRCFQ 483
Query: 235 FLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGV---RALIEMFSVLGLYEMAKYVIKK 291
L + + KKG+ N + CL++ + ++E +LG V +
Sbjct: 484 IL------EEMEKKGLKP-----NVISYGCLINCLCKDANILEAEVILG-----DMVHRG 527
Query: 292 TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADAC 351
YN+LI C K EM P +TYN ++ LCK G+ +A
Sbjct: 528 VVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAE 587
Query: 352 ELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
L E+ + D ITY I G A + M K G++P L T+ I G
Sbjct: 588 NLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAG 646
Score = 42.0 bits (97), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 50/126 (39%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V+ N+ ++ + ++ L E+ + G P Y + K G A EL+
Sbjct: 147 VASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMT 206
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M P Y + I C+ + A F++M+ R + P T+ I GY
Sbjct: 207 CMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVG 266
Query: 416 RYEDAY 421
+ E+A+
Sbjct: 267 QLEEAF 272
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 76/161 (47%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M + G EP +TY+ ++ LCK G+ +A E++EEM + +PD TY I + CR GK
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
D A F++M++RG + A I G E AYK + A K N+ Y+
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLH 482
+ S + AK M G P+V Y +L L+
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALY 161
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 94/224 (41%), Gaps = 10/224 (4%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+ G C V +EM EM + K V+ Y I++ +CR +L
Sbjct: 17 ISGLCKTGKVTEALEMVE-----EMTE---KGVNPDVATYTIIVDRLCRAGKVDEADELF 68
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
+M + GC T+ YN ++ LCK+ A +LLEEM + PD ITY + CR+
Sbjct: 69 HKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRM 128
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY--VVLSADKYKSSSNM 437
GK A FF+ M RG P + + + + + +A+ + AD+ + +
Sbjct: 129 GKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLI 188
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y+ L + A + +++ G P+ Y +L L
Sbjct: 189 TYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGL 232
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 96/218 (44%), Gaps = 2/218 (0%)
Query: 280 GLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
GL++ +K + YN LI CR L ++ G P T+TYN +L
Sbjct: 171 GLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILL 230
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
L + +A E+ ++M+ C P+ TY I + CRVG + +M ++ P
Sbjct: 231 GLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSP 290
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNV 458
+ A I + +DA+K V+ K + +++ Y++L K N A +
Sbjct: 291 DVLLCNAVIDMLCKAKKVDDAHK-VLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHEL 349
Query: 459 LSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSR 496
S M+ NG P++ Y VL L +++ H A+ L R
Sbjct: 350 FSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDR 387
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 2/185 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE--E 356
YN ++ +CR + M G P + YN +L L K G+ A+A L + +
Sbjct: 118 YNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMD 177
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
M R PD ITY I CRV K D A F ++ +G P T+ + + G
Sbjct: 178 MADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSN 237
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
++A + D + + YS++ S H + N + EM + P+V +
Sbjct: 238 MDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNA 297
Query: 477 VLKHL 481
V+ L
Sbjct: 298 VIDML 302
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 3/133 (2%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YNIL+ +C+ +L M GC P ++Y+ VL LCK + DA L +
Sbjct: 327 VVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFD 386
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+ R PD +T+ I + C+ GK D A + + M + + P T + G
Sbjct: 387 RMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDK 446
Query: 416 RYEDA---YKYVV 425
R ++A ++Y+V
Sbjct: 447 RTDEAVRLFQYMV 459
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 2/148 (1%)
Query: 263 SCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
S ++SG + M L LYE + K+ V N +I +C+ +L EM
Sbjct: 261 SIVLSGHCRVGNMARCLELYE--EMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEM 318
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
++G P +TYN +L LCK A EL M+ C PD ++Y + + C+ K
Sbjct: 319 SKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKV 378
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKG 410
A F++M++R L P + T + G
Sbjct: 379 HDARVLFDRMIERKLVPDVVTFNILMDG 406
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 82/195 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++ + R+ + ++ +M GC P TY+ VL C+ G A EL EEM
Sbjct: 225 YNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMT 284
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD + I C+ K D A +M K G P + T+ + G +
Sbjct: 285 EKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVD 344
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A++ D + + YS++ + K N A+ + M++ L P+V + ++
Sbjct: 345 KAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILM 404
Query: 479 KHLHTSHQEHMAKCL 493
L + + AK L
Sbjct: 405 DGLCKAGKLDEAKDL 419
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 6/137 (4%)
Query: 293 ERK----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
ERK V +NIL+ +C+ +DLL M + P +T ++ LC++ +
Sbjct: 390 ERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTD 449
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG--LQPRLATHAA 406
+A L + M+ + D + + I + CR GK A FF MVK P + T+
Sbjct: 450 EAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTT 509
Query: 407 FIKGYFIFYRYEDAYKY 423
+ R + A Y
Sbjct: 510 LVNALIEAGRVDQAVDY 526
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 84/199 (42%), Gaps = 4/199 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y++++ +C+ R L M + P +T+N ++ LCK G+ +A +LL+ M
Sbjct: 365 YSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMS 424
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
N PD +T + CR + D A F MV++G + H + G +
Sbjct: 425 EHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLA 484
Query: 419 DA---YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
A +K +V S ++ S + Y+ L + + A + +M +G P+ Y
Sbjct: 485 QALLFFKSMVKSDGEF-SPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYN 543
Query: 476 RVLKHLHTSHQEHMAKCLS 494
++ L + A L+
Sbjct: 544 TLMNGLRKQGRHIQADRLT 562
>gi|218195588|gb|EEC78015.1| hypothetical protein OsI_17428 [Oryza sativa Indica Group]
Length = 363
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 93/187 (49%), Gaps = 8/187 (4%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+NIL+K +C+ F LL EM + GC P TY+ ++ LC++GQ A EL E M
Sbjct: 180 FNILVKGLCQFGKFDDAISLLYEMPKQGCVPNVTTYSTLMNFLCQHGQVDKAFELCERMQ 239
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ DA+ Y I I CR + AFN F MV +G P T+ + G ++
Sbjct: 240 KEDIAADAVVYNILISGLCREQRVTEAFNLFKSMVPKGCYPNSGTYQVLLDGLLSSGKFV 299
Query: 419 DAYKYV-VLSADKYK---SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+A V ++ A++ + SS +L L S++ ++ A VL +M++ G P V +
Sbjct: 300 EAKGLVSMMRAERMRPGFSSFKLLIDGLCSVNCLDD----AHLVLKQMVEQGFVPRVGTW 355
Query: 475 RRVLKHL 481
+++ +
Sbjct: 356 TKLVTSM 362
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 87/201 (43%), Gaps = 3/201 (1%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L+ M Y + + +Y +L +C+R ++ ++ + ++G T +N ++
Sbjct: 130 LFAMPGYNCWPSTKTFNY--VLHMLVCKR-QYEVVHEVYLSASRLGVTLDTCCFNILVKG 186
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
LC+ G+ DA LL EM + C P+ TY + + C+ G+ D AF +M K +
Sbjct: 187 LCQFGKFDDAISLLYEMPKQGCVPNVTTYSTLMNFLCQHGQVDKAFELCERMQKEDIAAD 246
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
+ I G R +A+ K ++ Y +L + V AK ++S
Sbjct: 247 AVVYNILISGLCREQRVTEAFNLFKSMVPKGCYPNSGTYQVLLDGLLSSGKFVEAKGLVS 306
Query: 461 EMMKNGLRPNVSVYRRVLKHL 481
M +RP S ++ ++ L
Sbjct: 307 MMRAERMRPGFSSFKLLIDGL 327
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 76/179 (42%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
+ L M C P T T+NYVL +L Q E+ D + I +
Sbjct: 128 ETLFAMPGYNCWPSTKTFNYVLHMLVCKRQYEVVHEVYLSASRLGVTLDTCCFNILVKGL 187
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
C+ GKFD A + +M K+G P + T++ + + + A++ + ++
Sbjct: 188 CQFGKFDDAISLLYEMPKQGCVPNVTTYSTLMNFLCQHGQVDKAFELCERMQKEDIAADA 247
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSS 495
++Y++L S + A N+ M+ G PN Y+ +L L +S + AK L S
Sbjct: 248 VVYNILISGLCREQRVTEAFNLFKSMVPKGCYPNSGTYQVLLDGLLSSGKFVEAKGLVS 306
>gi|296081511|emb|CBI20034.3| unnamed protein product [Vitis vinifera]
Length = 596
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 153/359 (42%), Gaps = 10/359 (2%)
Query: 128 ATPKQVSEI---IELLRSGDSETESKLLSMSVSLSNASVIEILRVLNSEKVSALCFLKYM 184
A P++VS + I+ L + D E+ L +V LS+A V+ +L + A F +
Sbjct: 155 ADPEEVSRVCRVIDELFALDRNMEAVLDECNVDLSHALVVGVLERFKHARKPAFRFFCWA 214
Query: 185 REIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKA 244
+ F NS + ++ GR +E+M +L + + L + F ++
Sbjct: 215 GQ-KAGFTHNSRTYNAMMSVLGRTRQFESMMGMLGEMG-EKGLLTMETFSIAIKAFAAAK 272
Query: 245 LTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVS----YYN 300
KK + V E++ + V + L++ L + A+ + +K E + + Y
Sbjct: 273 ERKKAVG-VFELMKRYNFDAGVDTINCLLDNLGRAKLGKEAQALFEKLEDRFTPNLRTYT 331
Query: 301 ILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGR 360
+L+ CR + EM G +P + ++ +L L K + +DA +L E M +
Sbjct: 332 VLLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAK 391
Query: 361 NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
P+ TY I I C+ K A +F++MV G QP A + I G+ + +
Sbjct: 392 GPSPNVRTYTILIRDLCKQMKMQEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKV 451
Query: 421 YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
Y + +K + Y+ L L P A + +M++NG++ + Y ++K
Sbjct: 452 YALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQSTLHTYNMMMK 510
>gi|255541714|ref|XP_002511921.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549101|gb|EEF50590.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 248
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 2/181 (1%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
+L ++++ G P + YN ++G C + A E+L +M PD ITY I Y
Sbjct: 32 VLTKLKEAGFCPDIVCYNILIGGFCNKNRLDKAREMLNDMEEAGLEPDTITYNTLISYFG 91
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY--VVLSADKYKSSS 435
++G VA QM+K GLQP + T+ + I Y + ++A K + +A + +
Sbjct: 92 KIGDIKVAHRMMKQMIKDGLQPTVVTYGSLIHAYCLNGNVDEAMKIFKAMDAAASRVAPN 151
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSS 495
N++Y++L +NN+ +A +++ +M G++PN Y + K L + A L
Sbjct: 152 NVIYNILIDSLCENNDIELALSLMDDMRVKGVKPNTGTYNAMFKGLRERKWLNQALELMD 211
Query: 496 R 496
R
Sbjct: 212 R 212
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNILI +C D + L+ +MR G +P T TYN + L + A EL++ M+
Sbjct: 155 YNILIDSLCENNDIELALSLMDDMRVKGVKPNTGTYNAMFKGLRERKWLNQALELMDRMM 214
Query: 359 GRNCHPDAITYEIFIVYSCRVGK 381
+ C+PD IT EI + VG+
Sbjct: 215 EQPCNPDYITMEILTEWLSAVGE 237
>gi|298204410|emb|CBI16890.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 102/218 (46%), Gaps = 8/218 (3%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRC-DFKGPRDLLVEMRQ 324
LI ++ G++ A + + ER + YN LI CR D + L M
Sbjct: 262 TLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREVNDLEEALRLREVMEV 321
Query: 325 VGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
G P +TYN +L LC+ G+ DA LL EM R PD +T I C++G
Sbjct: 322 EGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGS 381
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA- 443
A +M++ GL+P T A I G+ + + A +++ D S S YS L
Sbjct: 382 AMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVD 441
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
S +D++N + + + E+ + GL ++SVYR +++ L
Sbjct: 442 SYYDQDNKEAVIR-LPDELSRKGLFVDISVYRALIRRL 478
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 112/269 (41%), Gaps = 7/269 (2%)
Query: 229 NEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYV 288
N + +L + ++ +T+ I +V E + G + L+ + L M V
Sbjct: 151 NSQILSWLVIFYANSRMTQDAI-QVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKV 209
Query: 289 IKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
KK R + +N+LI C+ D + LL EM P TYN ++ + CK
Sbjct: 210 YKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCK 269
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCR-VGKFDVAFNFFNQMVKRGLQPRLA 402
G +A + + M PD +TY I CR V + A M GL P +
Sbjct: 270 KGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREVNDLEEALRLREVMEVEGLHPGVV 329
Query: 403 THAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM 462
T+ + ++ + +DA + + +++ N+ + L + + K + A V +M
Sbjct: 330 TYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKM 389
Query: 463 MKNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
++ GL+P+ ++ ++ H+ AK
Sbjct: 390 LEAGLKPDQFTFKALIHGFCKLHEVDSAK 418
>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 664
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 88/184 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ ++ L+ CR + +LV++++ G EP + YN +LG + G+ DA +LL
Sbjct: 269 LRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLA 328
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM NC P+A ++ I I C+ K D A F +M G + + T+ I G+ +
Sbjct: 329 EMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWG 388
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ AY+ + K S + Y + H+K ++ EM K G P++++Y
Sbjct: 389 NTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYN 448
Query: 476 RVLK 479
+++
Sbjct: 449 TMIR 452
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 81/189 (42%), Gaps = 12/189 (6%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V Y LI C+ + ++L +M Q G +P L+Y ++ K + + E
Sbjct: 371 EADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECME 430
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
L+EEM C PD Y I C++G A + +M GL P L T+ + G+
Sbjct: 431 LIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFL 490
Query: 413 ---IFYRYEDAYKYVV----LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKN 465
D +K +V LSA +Y + + +LL + MAKN+ S M
Sbjct: 491 SQGCLVEACDYFKEMVERGLLSAPQYGTLKELTNALL-----RAEKLEMAKNMWSCMTTK 545
Query: 466 GLRPNVSVY 474
G NVS +
Sbjct: 546 GCELNVSAW 554
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 78/183 (42%), Gaps = 2/183 (1%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E + YN L+ + + DLL EM++V C P ++ ++ CK + +A
Sbjct: 301 EPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMR 360
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+ EM G C D +TY I C+ G D A+ + M+++G P ++ + +
Sbjct: 361 IFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHE 420
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNM-LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
E+ + ++ K ++ +Y+ + L K + A + EM GL P +
Sbjct: 421 KKEELEECME-LIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGL 479
Query: 472 SVY 474
Y
Sbjct: 480 DTY 482
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 68/158 (43%), Gaps = 1/158 (0%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
++L EM + GCEP + +L LCKNG +A L E+M R +P+ + +
Sbjct: 221 EVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVR-FNPNLRHFTSLLYGW 279
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
CR GK A + Q+ + G +P + + + GY + DA+ + +
Sbjct: 280 CREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNA 339
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+++L K A + +EM +G +V Y
Sbjct: 340 ASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTY 377
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 91/197 (46%), Gaps = 2/197 (1%)
Query: 286 KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNG 345
+ V K + V + LI +C+ + RD+L M +G P +TYN ++ LCK+G
Sbjct: 316 EMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSG 375
Query: 346 QDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
+ +AC+ LEEM+ C PD+ITY + CR + D A +++ G P T+
Sbjct: 376 RIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYN 435
Query: 406 AFIKGYFIFYRYEDAYKYV-VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMK 464
+ G + + E A + + ++ S + + LH ++ N +L ++
Sbjct: 436 ILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLH-RSGNLAGTMELLRVVLA 494
Query: 465 NGLRPNVSVYRRVLKHL 481
G+ P+ + +L +
Sbjct: 495 KGMLPDATTCSSILDWV 511
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 65/136 (47%), Gaps = 13/136 (9%)
Query: 296 VSYYNILIKEMCRRCD-------FKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
V+ YNI+++ +CR D F+G EM + G P +TYN ++ LCK+
Sbjct: 1 VADYNIVLQSLCRAGDTARALEIFRG------EMARDGVAPTIVTYNTIINGLCKSNDLG 54
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
EL EE++ R HPD +TY I C+ G + A M RG P + T++ I
Sbjct: 55 AGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLI 114
Query: 409 KGYFIFYRYEDAYKYV 424
G R ++A + +
Sbjct: 115 NGLCKVGRIDEARELI 130
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 7/203 (3%)
Query: 283 EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLC 342
EMA+ + T + YN +I +C+ D +L E+ + G P +TYN ++ LC
Sbjct: 27 EMARDGVAPT---IVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLC 83
Query: 343 KNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ--PR 400
K G +A L +M R C P+ +TY + I C+VG+ D A +M ++ P
Sbjct: 84 KAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPN 143
Query: 401 LATHAAFIKGYFIFYRYEDAYKYV--VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNV 458
+ T+ +F+ G +A + + + S + +S L K A +V
Sbjct: 144 IITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSV 203
Query: 459 LSEMMKNGLRPNVSVYRRVLKHL 481
+M+ G PNV Y ++ L
Sbjct: 204 FDDMIAGGYVPNVITYNALVNGL 226
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 107/240 (44%), Gaps = 26/240 (10%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTERK-------VSYYNILIKEMCRRCDFKGPRDLLVEMRQ 324
LI +G + A+ +I++ RK + YN + +C++ +L+ +R
Sbjct: 113 LINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRD 172
Query: 325 --VGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
+ P T+T++ ++ LCK GQ +AC + ++M+ P+ ITY + C+ K
Sbjct: 173 GSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKM 232
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV-----------VLSADKY 431
+ A MV +G+ P + T++ + + R ++A + + VL DK
Sbjct: 233 ERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDK- 291
Query: 432 KSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
+ +++L + K N A + EM+ L+P+V + ++ L + Q A+
Sbjct: 292 -----VTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAAR 346
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 65/126 (51%)
Query: 295 KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
+VS YN LI +CR+ D K R L+ EM +TYN ++ LCK G+ A +LL
Sbjct: 367 EVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLL 426
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
+EM + +P +TY + CR G A +M ++G Q + TH IKG+ +
Sbjct: 427 DEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLK 486
Query: 415 YRYEDA 420
R EDA
Sbjct: 487 GRLEDA 492
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 89/183 (48%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNILI C+ + G + EM++ G P +TYN ++ LC +G+ +A L ++M+
Sbjct: 231 YNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMV 290
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+ +T+ + I C+ + A N FN M K+G+ P T+ I Y R E
Sbjct: 291 SSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRME 350
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA+ + D+ Y+ L + + + A+++++EM+ L +V Y ++
Sbjct: 351 DAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILI 410
Query: 479 KHL 481
L
Sbjct: 411 DSL 413
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 283 EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLC 342
EM K +K E V +NI++ +C+ D++ +M+ G P +TYN ++ C
Sbjct: 145 EMIK---RKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYC 201
Query: 343 KNGQ-----DADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
K G+ ADA +L+EM+ + P+ +TY I I C+ A F +M ++GL
Sbjct: 202 KMGRIGKMYKADA--ILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGL 259
Query: 398 QPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSS----SNMLYSLLASLHDKNNNPV 453
+P + T+ I G + ++A V D+ SS + + +++L + KN
Sbjct: 260 RPNVVTYNILINGLCSDGKVDEA----VALRDQMVSSDLEPNVVTHNVLINGFCKNKTVN 315
Query: 454 MAKNVLSEMMKNGLRPNVSVY 474
A N+ ++M K G+ PN Y
Sbjct: 316 EAINLFNDMEKQGVDPNAMTY 336
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 90/217 (41%), Gaps = 9/217 (4%)
Query: 296 VSYYNILIKEMC---RRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
V YN LI C R +L EM G P +TYN ++ CK+ + A
Sbjct: 190 VITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMR 249
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+ EM + P+ +TY I I C GK D A +QMV L+P + TH I G
Sbjct: 250 VFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLING-- 307
Query: 413 IFYRYEDAYKYVVLSADKYKSSSN---MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
F + + + + L D K + M Y+ L + K+ A + + M+ G+ P
Sbjct: 308 -FCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFP 366
Query: 470 NVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
VS Y ++ L A+ L + S L + V
Sbjct: 367 EVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADV 403
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 81/187 (43%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V +N+LI C+ +L +M + G +P +TY ++ CK+G+ DA
Sbjct: 295 EPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFA 354
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
L M+ R P+ TY I CR G A + N+MV + L + T+ I
Sbjct: 355 LYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLC 414
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
A K + +K + S++ Y+ L + + N A V + M + G + NV
Sbjct: 415 KKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVV 474
Query: 473 VYRRVLK 479
+ ++K
Sbjct: 475 THNVLIK 481
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 81/175 (46%), Gaps = 13/175 (7%)
Query: 230 EKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVI 289
E AF ++I +GI+ V N CL++G+ ++ + L M + V
Sbjct: 350 EDAFALYNMMID------RGIFPEVSTYN-----CLIAGLCRKGDVKAARSL--MNEMVS 396
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
KK V YNILI +C++ + + LL EM + G P +TYN ++ C+ G
Sbjct: 397 KKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRA 456
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
A + M + + +T+ + I C G+ + A N+M++RGL P T+
Sbjct: 457 ALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTY 511
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 82/198 (41%), Gaps = 10/198 (5%)
Query: 312 FKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEI 371
FK D ++ + C P+ L L K ++ D + EM+ R + I++ I
Sbjct: 108 FKRAGDYGFKLSLISCNPL-------LSGLVKESENGDMEFVYREMIKRKIELNVISFNI 160
Query: 372 FIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKY 431
+ C+VGK + A + M G+ P + T+ I GY R YK + +
Sbjct: 161 VVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMV 220
Query: 432 KSS---SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEH 488
+ + Y++L K+ N A V EM + GLRPNV Y ++ L + +
Sbjct: 221 AKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVD 280
Query: 489 MAKCLSSRYSSLSLGSSV 506
A L + S L +V
Sbjct: 281 EAVALRDQMVSSDLEPNV 298
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ CR + + + M + G + +T+N ++ C G+ DA LL EML
Sbjct: 441 YNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEML 500
Query: 359 GRNCHPDAITYEIF 372
R P+ TYEI
Sbjct: 501 ERGLVPNRTTYEII 514
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 131/297 (44%), Gaps = 23/297 (7%)
Query: 198 CSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLP--VLISS--KALTKKG-IWR 252
C+LV+ C +++++E +++N+ FGF+P +S+ L KKG I
Sbjct: 289 CTLVLGLC-KVEEFEAGEEMMNEM---------IEFGFVPSEAAVSNLVDGLRKKGNIGS 338
Query: 253 VVEVLNQVGGSCLVSGV---RALIEMFSVLGLYEMAKYVIKKTERKVSY-----YNILIK 304
+++N+V + + ALI G + A+ + K + Y+ILI
Sbjct: 339 AFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILID 398
Query: 305 EMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHP 364
C+R L +M +VG + Y+ ++ CK G+ A L +EM+ P
Sbjct: 399 SFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKP 458
Query: 365 DAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV 424
+ + Y I C+ G+ AF +++M +G+ P T A I G R +A K
Sbjct: 459 NVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLF 518
Query: 425 VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + + Y++L H K N V A +L EM++ GL P+ YR ++ L
Sbjct: 519 GEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGL 575
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 59/112 (52%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNILI+ C+ + ++LV M G P ++Y+ ++ C+ G +A +L E ML
Sbjct: 777 YNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESML 836
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
R +PD + Y I C G+ AF + M++RG++P AT+ + I G
Sbjct: 837 NRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHG 888
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 6/186 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+LI+ C+ + +LL EM + G P T TY ++ LC G+ ++A E + ++
Sbjct: 533 YNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQ 592
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
G + + + + C+ G+ D A + +M+ RG+ L ++ I G R +
Sbjct: 593 GEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGIL---RQQ 649
Query: 419 DAYKYVVL---SADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
D + L D+ N+LY+ + + K N MA + M+ G PNV Y
Sbjct: 650 DRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYT 709
Query: 476 RVLKHL 481
++ L
Sbjct: 710 ALINGL 715
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 92/215 (42%), Gaps = 8/215 (3%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+ G C + +RA +F EM +K V Y LI C+ + L
Sbjct: 432 ISGHCKLGKLRAAKSLFD-----EMIANGLKPN---VVIYTSLISGYCKEGELHNAFRLY 483
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
EM G P T T+ ++ LC + A+A +L EM+ N P+ +TY + I C+
Sbjct: 484 HEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKE 543
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
G AF ++MV++GL P T+ I G R +A +++ + + + M +
Sbjct: 544 GNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCF 603
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
S L + K A + EM+ G+ ++ Y
Sbjct: 604 SALLHGYCKEGRLDDALDACREMLGRGVAMDLVCY 638
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 77/179 (43%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y +++ +C DF R+++ M GC+ TYN + LCKN + +A E+
Sbjct: 215 VYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKN 274
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ + D TY ++ C+V +F+ N+M++ G P A + + G
Sbjct: 275 LLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKG 334
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
A+ V + S +Y+ L + K+ A+++ + M GL PN Y
Sbjct: 335 NIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTY 393
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 272 LIEMFSVLG-LYEMAKYVIKKTERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI F LG + E A+ ++ + +S Y+ +I E CRR D K L M G
Sbjct: 780 LIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRG 839
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
P T+ YN+++ C G+ A EL ++M+ R P+ TY I +C
Sbjct: 840 VNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 890
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%)
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN 390
T+TYN ++ CK G+ +A E+L M+ PD I+Y I CR G A +
Sbjct: 774 TVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWE 833
Query: 391 QMVKRGLQPRLATHAAFIKG 410
M+ RG+ P + I G
Sbjct: 834 SMLNRGVNPDTVAYNFLIYG 853
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 78/180 (43%), Gaps = 1/180 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y++LI + R+ D + DLL +M G P + Y ++ K G A L + M+
Sbjct: 638 YSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMV 697
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C P+ +TY I C++G D A +M+ P T+A F+ E
Sbjct: 698 SEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIE 757
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + + + + +++ + Y++L K A VL M+ +G+ P+ Y ++
Sbjct: 758 KAIQLHDVLLEGFLANT-VTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTII 816
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 112/310 (36%), Gaps = 54/310 (17%)
Query: 215 RQLLNDFNVYQVCLNEKAFGFL-----------PVLISSKALTKKGIWRVVEVLNQVGGS 263
R+ +ND Q LNE F L L + + + +G+ ++ V S
Sbjct: 585 REFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGV-----AMDLVCYS 639
Query: 264 CLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMR 323
L+ G+ + S++ L + + + + Y +I + + K L M
Sbjct: 640 VLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVL--YTTMIDANAKAGNLKMAFGLWDIMV 697
Query: 324 QVGCEPITLTYNYVLGVLCKNGQDADACELL-EEMLGRNCHPD----------------- 365
GC P +TY ++ LCK G D ELL EML N P+
Sbjct: 698 SEGCLPNVVTYTALINGLCKIGL-MDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNI 756
Query: 366 -----------------AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
+TY I I C++G+ A M+ G+ P +++ I
Sbjct: 757 EKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTII 816
Query: 409 KGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLR 468
Y ++A K ++ + + Y+ L A + +MM+ G++
Sbjct: 817 YEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVK 876
Query: 469 PNVSVYRRVL 478
PN + Y ++
Sbjct: 877 PNRATYNSLI 886
>gi|255580475|ref|XP_002531063.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529358|gb|EEF31324.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 141/350 (40%), Gaps = 47/350 (13%)
Query: 139 LLRSGDSETESKLLSMSVSLSNASVIEILRVLNSEKVSALCFLKYMREIMPEFYKNSDIC 198
L ++ +S E LL S +S A V+E+L+ L++ AL F K+ E F N++
Sbjct: 92 LSKNPNSSIEKLLLGASFKVSPALVLEVLKRLSNAGALALSFFKWA-EKQKGFMYNTESY 150
Query: 199 SLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLN 258
+ +ID+ G++ + + L+ND V L ++ F + + K+ + E +
Sbjct: 151 NALIDSLGKIKQFNMIWNLVNDMKRKGV-LTKETFALISRRYARSGKVKEAM-NTFEKME 208
Query: 259 QVGGSCLVSGVRALI-------EMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCD 311
+ G + L+ ++ S +++ K I++ + Y IL++ + +
Sbjct: 209 KFGLKIESTDFNRLLDTLIKSRQVLSAQNVFDKMK--IRRFVPDIKSYTILLEGWGQEKN 266
Query: 312 FKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEI 371
++ EM+ G EP +TY ++ CK + DA EL EM +NC P +
Sbjct: 267 LLKLDEVYREMKDEGFEPDVVTYGILINAYCKVRKYDDAIELFREMESKNCQPSPHIFCT 326
Query: 372 FIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKY 431
I V + A FF + G P T+ A + Y R +DAY+ V
Sbjct: 327 LINGLGSVRRLSEALEFFRRSKASGFAPETPTYNAVVGAYCWSMRIDDAYRMV------- 379
Query: 432 KSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
EM K+G+ PN Y +L HL
Sbjct: 380 ----------------------------DEMRKSGVGPNSRTYDIILHHL 401
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++ C ++ EMR+ G P + TY+ +L L K + +A + E+M
Sbjct: 359 YNAVVGAYCWSMRIDDAYRMVDEMRKSGVGPNSRTYDIILHHLIKAEKTTEAFSVFEKMS 418
Query: 359 GRN-CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
C P TY+I + C + K + A +++M +G+ P + + I
Sbjct: 419 SEEECEPTVSTYDIIVRMFCNMDKVESAIKVWDRMKAKGVHPGMHMFSILI 469
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%)
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
CEP TY+ ++ + C + A ++ + M + HP + I I C K D+A
Sbjct: 423 CEPTVSTYDIIVRMFCNMDKVESAIKVWDRMKAKGVHPGMHMFSILINSLCHENKLDIAC 482
Query: 387 NFFNQMVKRGLQPRLA 402
+F +M+ G++P A
Sbjct: 483 KYFQEMLDVGIRPPAA 498
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 91/183 (49%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN +I R + +G R +L MR G EP + TY ++ +CK G+ +A L +
Sbjct: 208 VVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFD 267
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M+ P+A+TY I C G + AF++ ++MVK+G+ P ++T+ + F+
Sbjct: 268 KMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEG 327
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R +A + K + Y++L + + + N A ++ +EM+ G+ P Y
Sbjct: 328 RMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYT 387
Query: 476 RVL 478
++
Sbjct: 388 SLI 390
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI + RR K DL ++ G P + +N ++ C NG A LL+EM
Sbjct: 386 YTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMD 445
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
++ PD +T+ + CR GK + A ++M RG++P ++ I GY +
Sbjct: 446 RKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIK 505
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA+ + + + Y+ L KN +A+ +L EM+ G+ P+ S Y ++
Sbjct: 506 DAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLI 565
Query: 479 KHL 481
+ +
Sbjct: 566 EGM 568
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 110/269 (40%), Gaps = 23/269 (8%)
Query: 230 EKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVI 289
E+AF + + KKGI V N L+ + G A +I
Sbjct: 295 ERAFSY------RDEMVKKGIMPSVSTYN------------LLVHALFMEGRMGEADDMI 336
Query: 290 KKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKN 344
K+ +K YNILI R + K DL EM G EP +TY ++ VL +
Sbjct: 337 KEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRR 396
Query: 345 GQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
+ +A +L E++L + PD I + I C G + AF +M ++ + P T
Sbjct: 397 NRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTF 456
Query: 405 AAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMK 464
++G + E+A + + ++ Y+ L S + + + A V EM+
Sbjct: 457 NTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLS 516
Query: 465 NGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
G P + Y ++K L + + +A+ L
Sbjct: 517 IGFNPTLLTYNALIKCLCKNQEGDLAEEL 545
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 6/161 (3%)
Query: 255 EVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVS-----YYNILIKEMCRR 309
++L+Q G S V A+I+ G E A ++K+ +RK +N L++ CR
Sbjct: 408 KILDQ-GVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCRE 466
Query: 310 CDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITY 369
+ R LL EM+ G +P ++YN ++ + G DA + +EML +P +TY
Sbjct: 467 GKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTY 526
Query: 370 EIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
I C+ + D+A +MV +G+ P +T+ + I+G
Sbjct: 527 NALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEG 567
>gi|297723459|ref|NP_001174093.1| Os04g0618050 [Oryza sativa Japonica Group]
gi|222629567|gb|EEE61699.1| hypothetical protein OsJ_16179 [Oryza sativa Japonica Group]
gi|255675780|dbj|BAH92821.1| Os04g0618050 [Oryza sativa Japonica Group]
Length = 363
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 93/187 (49%), Gaps = 8/187 (4%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+NIL+K +C+ F LL EM + GC P TY+ ++ LC++GQ A EL E M
Sbjct: 180 FNILVKGLCQFGKFGDAISLLYEMPKQGCVPNVTTYSTLMNFLCQHGQVDKAFELCERMQ 239
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ DA+ Y I I CR + AFN F MV +G P T+ + G ++
Sbjct: 240 KEDIVADAVVYNILIAGLCREQRVTEAFNLFKSMVPKGCYPNSGTYQVLLDGLLSSGKFV 299
Query: 419 DAYKYV-VLSADKYK---SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+A V ++ A++ + SS +L L S++ ++ A VL +M++ G P V +
Sbjct: 300 EAKGLVSMMRAERMRPGFSSFKLLIDGLCSVNCLDD----AHLVLKQMVEQGFVPRVGTW 355
Query: 475 RRVLKHL 481
+++ +
Sbjct: 356 TKLVTSM 362
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 87/201 (43%), Gaps = 3/201 (1%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L+ M Y + + +Y +L +C+R ++ ++ + ++G T +N ++
Sbjct: 130 LFAMPGYNCWPSTKTFNY--VLHMLVCKR-QYEVVHEVYLSASRLGVTLDTCCFNILVKG 186
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
LC+ G+ DA LL EM + C P+ TY + + C+ G+ D AF +M K +
Sbjct: 187 LCQFGKFGDAISLLYEMPKQGCVPNVTTYSTLMNFLCQHGQVDKAFELCERMQKEDIVAD 246
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
+ I G R +A+ K ++ Y +L + V AK ++S
Sbjct: 247 AVVYNILIAGLCREQRVTEAFNLFKSMVPKGCYPNSGTYQVLLDGLLSSGKFVEAKGLVS 306
Query: 461 EMMKNGLRPNVSVYRRVLKHL 481
M +RP S ++ ++ L
Sbjct: 307 MMRAERMRPGFSSFKLLIDGL 327
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 106/227 (46%), Gaps = 8/227 (3%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+ G C V+ +E+F M++ ++ T V Y LI + ++ + L
Sbjct: 334 INGHCKEGNVKKALEIFE-----NMSRRGVRAT---VVTYTSLIYALSKKGQVQETDKLF 385
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
E + G P + YN ++ +G A E++ EM + PD +TY + C +
Sbjct: 386 DEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLL 445
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
G+ D A ++M KRG+QP L T+ I GY + +DA + +K + + + Y
Sbjct: 446 GRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTY 505
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
+ L KN A+N++ EM++NG+ P+ S Y +++ L T +
Sbjct: 506 NALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 552
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 89/190 (46%), Gaps = 2/190 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVG-CEPITLTYNYVLGVLCKNGQDADACELLEEM 357
YN +I C R + D++ EMR+ G P TY V+ CK G+ +A ++ +EM
Sbjct: 188 YNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEM 247
Query: 358 LGRN-CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
L + P+A+ Y I C GK D A + ++MV+RG+ +AT+ + F+ R
Sbjct: 248 LTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGR 307
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
+AY+ V K + Y++L + H K N A + M + G+R V Y
Sbjct: 308 GTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTS 367
Query: 477 VLKHLHTSHQ 486
++ L Q
Sbjct: 368 LIYALSKKGQ 377
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 85/198 (42%), Gaps = 18/198 (9%)
Query: 286 KYVIKKTERKVSYYNILIKEMCRRCDFKGPR--DLLVEMRQVGCEPITLTYNYVLGVLCK 343
+ V + V+ YN+L+ + D +G +L+ EM G TYN ++ CK
Sbjct: 282 RMVERGVAMTVATYNLLVHALF--MDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCK 339
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
G A E+ E M R +TY I + G+ F++ V+RG++P L
Sbjct: 340 EGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVL 399
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS-------LLASLHDKNNNPVMAK 456
+ A I + + A++ + K + ++ Y+ LL + + A+
Sbjct: 400 YNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE-------AR 452
Query: 457 NVLSEMMKNGLRPNVSVY 474
++ EM K G++P++ Y
Sbjct: 453 KLIDEMTKRGIQPDLVTY 470
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 7/122 (5%)
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN 390
T T+N +L LC G+ A A ELL +M P+A+TY I C G+ A +
Sbjct: 154 TTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMR 209
Query: 391 QMVKR-GLQPRLATHAAFIKGYFIFYRYEDAYKYV--VLSADKYKSSSNMLYSLLASLHD 447
+M +R G+ P T+ I G+ R ++A K +L+ + K + M +L+ D
Sbjct: 210 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 269
Query: 448 KN 449
+
Sbjct: 270 QG 271
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 9/215 (4%)
Query: 269 VRALIEMFSVLGLYEMAKYV-IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGC 327
+R + + V +EM + + +K +E V YNIL++ + + ++ L+ +M C
Sbjct: 270 IRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
+P +TY+ ++ LC++G+ +A LL+ M + PDA +Y+ I CR G+ DVA
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389
Query: 388 FFNQMVKRGLQPRLATH----AAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
F M+ G P + + A K E K + SS N ++S L
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
S DK + A +++ EMM NG+ P+ Y ++
Sbjct: 450 SSGDK----IRALHMILEMMSNGIDPDEITYNSMI 480
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 99/228 (43%), Gaps = 6/228 (2%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEM 306
RV+E+L + G V ALI F + + A V+ + K YNI+I +
Sbjct: 145 RVMEILEKFGQPD-VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSL 203
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
C R +L ++ C+P +TY ++ G +A +L++EML R PD
Sbjct: 204 CSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDM 263
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
TY I C+ G D AF + +G +P + ++ ++ ++E+ K +
Sbjct: 264 FTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTK 323
Query: 427 SADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + + YS+L + ++ A N+L M + GL P+ Y
Sbjct: 324 MFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSY 371
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 81/183 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI C+ +L MR P T+TYN ++G LC G+ A ++L ++L
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
NC P ITY I I + G D A ++M+ RGL+P + T+ I+G +
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A++ V K + Y++L + ++++M PNV Y ++
Sbjct: 281 RAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 340
Query: 479 KHL 481
L
Sbjct: 341 TTL 343
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 86/187 (45%), Gaps = 2/187 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I+ MC+ +++ + G EP ++YN +L L G+ + +L+ +M
Sbjct: 266 YNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMF 325
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C P+ +TY I I CR GK + A N M ++GL P ++ I + R +
Sbjct: 326 SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD 385
Query: 419 DAYKYV-VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
A +++ + +D ++LA+L KN A + ++ + G PN S Y +
Sbjct: 386 VAIEFLETMISDGCLPDIVNYNTVLATLC-KNGKADQALEIFGKLGEVGCSPNSSSYNTM 444
Query: 478 LKHLHTS 484
L +S
Sbjct: 445 FSALWSS 451
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 1/123 (0%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
S YN + + D +++EM G +P +TYN ++ LC+ G +A ELL +
Sbjct: 439 SSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVD 498
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY-FIFY 415
M HP +TY I ++ C+ + + A N MV G +P T+ I+G F Y
Sbjct: 499 MRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGY 558
Query: 416 RYE 418
R E
Sbjct: 559 RAE 561
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 93/233 (39%), Gaps = 35/233 (15%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
M K +K + V Y+ILI +CR + +LL M++ G P +Y+ ++ C+
Sbjct: 321 MTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCR 380
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN------------- 390
G+ A E LE M+ C PD + Y + C+ GK D A F
Sbjct: 381 EGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSS 440
Query: 391 ----------------------QMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSA 428
+M+ G+ P T+ + I ++A++ +V
Sbjct: 441 YNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMR 500
Query: 429 DKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
S + Y+++ K + A NVL M+ NG RPN + Y +++ +
Sbjct: 501 SCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 74/186 (39%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y ILI+ L+ EM G +P TYN ++ +CK G A E++
Sbjct: 228 VITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVR 287
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ + PD I+Y I + GK++ +M P + T++ I
Sbjct: 288 NLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDG 347
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ E+A + L +K + Y L + + +A L M+ +G P++ Y
Sbjct: 348 KIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYN 407
Query: 476 RVLKHL 481
VL L
Sbjct: 408 TVLATL 413
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 89/190 (46%), Gaps = 2/190 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQ-VGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
YN +I C R + D++ EMR+ G P TY V+ CK G+ +A ++ +EM
Sbjct: 75 YNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEM 134
Query: 358 LGRN-CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
L + P+A+ Y I C GK D A + ++MV+RG+ +AT+ + F+ R
Sbjct: 135 LTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGR 194
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
+AY+ V K + Y++L + H K N A + M + G+R V Y
Sbjct: 195 GTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTS 254
Query: 477 VLKHLHTSHQ 486
++ L Q
Sbjct: 255 LIYALSKKGQ 264
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 106/227 (46%), Gaps = 8/227 (3%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+ G C V+ +E+F M++ ++ T V Y LI + ++ + L
Sbjct: 221 INGHCKEGNVKKALEIFE-----NMSRRGVRAT---VVTYTSLIYALSKKGQVQETDKLF 272
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
E + G P + YN ++ +G A E++ EM + PD +TY + C +
Sbjct: 273 DEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLL 332
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
G+ D A ++M KRG+QP L T+ I GY + +DA + +K + + + Y
Sbjct: 333 GRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTY 392
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
+ L KN A+N++ EM++NG+ P+ S Y +++ L T +
Sbjct: 393 NALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 439
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 83/188 (44%), Gaps = 18/188 (9%)
Query: 296 VSYYNILIKEMCRRCDFKGPR--DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACEL 353
V+ YN+L+ + D +G +L+ EM G P TYN ++ CK G A E+
Sbjct: 179 VATYNLLVHALF--MDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEI 236
Query: 354 LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
E M R +TY I + G+ F++ V+RG++P L + A I +
Sbjct: 237 FENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHST 296
Query: 414 FYRYEDAYKYVVLSADKYKSSSNMLYS-------LLASLHDKNNNPVMAKNVLSEMMKNG 466
+ A++ + K + ++ Y+ LL + + A+ ++ EM K G
Sbjct: 297 SGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE-------ARKLIDEMTKRG 349
Query: 467 LRPNVSVY 474
++P++ Y
Sbjct: 350 IQPDLVTY 357
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 7/122 (5%)
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN 390
T T+N +L LC G+ A A ELL +M P+A+TY I C G+ A +
Sbjct: 41 TTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMR 96
Query: 391 QMVKR-GLQPRLATHAAFIKGYFIFYRYEDAYKYV--VLSADKYKSSSNMLYSLLASLHD 447
+M +R G+ P T+ I G+ R ++A K +L+ + K + M +L+ D
Sbjct: 97 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 156
Query: 448 KN 449
+
Sbjct: 157 QG 158
>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 84/183 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI E C + EMR+ G +TYN ++G LC+ + +A +L+ ++
Sbjct: 266 YNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVN 325
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ +TY I I C VGK D A FNQ+ GL P L T+ I GY
Sbjct: 326 KVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLA 385
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A V ++ + S + Y++L + N A + S M K+GL P+V Y ++
Sbjct: 386 GALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLI 445
Query: 479 KHL 481
L
Sbjct: 446 HGL 448
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 82/176 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNILI C L +++ G P +TYN ++ K A A +L++EM
Sbjct: 336 YNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEME 395
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R P +TY I I R+ + A + M K GL P + T++ I G + +
Sbjct: 396 ERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMK 455
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+A K + + ++++Y+ + + K + A +L+EM+ +G+ PNV+ +
Sbjct: 456 EASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASF 511
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 98/238 (41%), Gaps = 15/238 (6%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEM 306
++V +N+VG S + LI F +G + A + + + + YN LI
Sbjct: 319 KLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGY 378
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
+ + G DL+ EM + P +TY ++ + ACE+ M PD
Sbjct: 379 SKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDV 438
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
TY + I C G A F + + LQP + I GY ++ Y L
Sbjct: 439 YTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYC-----KEGSSYRAL 493
Query: 427 SADKYKSSSNMLYSLLA-----SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
S M+ ++ + L ++ A+ +L +M+ +GL+P+VS+Y+ V K
Sbjct: 494 RLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMVHK 551
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 76/197 (38%), Gaps = 4/197 (2%)
Query: 282 YEMAKYVIKKTERKVSY----YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYV 337
++ A ++ + + KV + I+IK C F LL + + G P + Y +
Sbjct: 140 FDKAWWIFNELKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTL 199
Query: 338 LGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
+ CK G A L +M P+ TY + + + G F + M + G+
Sbjct: 200 IDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGI 259
Query: 398 QPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKN 457
P + I Y + A+K +K + M Y++L + A
Sbjct: 260 VPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVK 319
Query: 458 VLSEMMKNGLRPNVSVY 474
++ ++ K GL PN+ Y
Sbjct: 320 LVHKVNKVGLSPNIVTY 336
>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 111/215 (51%), Gaps = 9/215 (4%)
Query: 279 LGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
+G+ + + + ++ E VS YN LI +C+ D+KG +L+ EM + G P ++Y+ ++
Sbjct: 228 VGMVKEGRQLAERFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLI 287
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC--RVGKFDVAFNFFNQMVKR- 395
L +GQ A LL +ML R CHP+ T +V C R FD A + +NQM++
Sbjct: 288 NELSNSGQIELAFSLLAQMLKRGCHPNIHTLS-SLVKGCFVRGTTFD-ALDMWNQMIRGF 345
Query: 396 GLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM-LYSLLASLHDKNNNPVM 454
GLQP + + ++G F + D V L ++ S N+ Y L + K +
Sbjct: 346 GLQPNVVAYNTLVQG-FCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEG 404
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVLKHL--HTSHQE 487
A + ++M+ +G PNV VY +++ L H+ +E
Sbjct: 405 AVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKE 439
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 75/184 (40%), Gaps = 1/184 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN L++ C + + + M ++GC P TY ++ K G A +
Sbjct: 351 VVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWN 410
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML C P+ + Y + CR KF A + M K P + T AFIKG
Sbjct: 411 KMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAG 470
Query: 416 RYEDAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
R + A K +Y+ N++ Y+ L K N A + E+ G+ + S Y
Sbjct: 471 RLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTY 530
Query: 475 RRVL 478
+L
Sbjct: 531 NTLL 534
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 80/204 (39%), Gaps = 52/204 (25%)
Query: 317 DLLVEMRQVGCEPIT-----------------------------------LTYNYVLGVL 341
++ +++ GC+P TYN +L L
Sbjct: 131 EMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKAL 190
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ--- 398
CKN + A +LL EM + C P+A++Y I C VG MVK G Q
Sbjct: 191 CKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVG-----------MVKEGRQLAE 239
Query: 399 ---PRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMA 455
P ++ + A I G Y+ + + +K S + + YS L + + +A
Sbjct: 240 RFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELA 299
Query: 456 KNVLSEMMKNGLRPNVSVYRRVLK 479
++L++M+K G PN+ ++K
Sbjct: 300 FSLLAQMLKRGCHPNIHTLSSLVK 323
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 74/166 (44%), Gaps = 8/166 (4%)
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK------VSYYNILIKEM 306
++E++++ + V A I+ G + A+ V ++ E++ + YN L+ +
Sbjct: 443 LIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGL 502
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
+ + L E+ G E T TYN +L C G A +L+ +M+ PD
Sbjct: 503 AKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDE 562
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMV--KRGLQPRLATHAAFIKG 410
IT + I+ C+ GK + A + + +R +P + ++ I G
Sbjct: 563 ITMNMIILAYCKQGKAERAVQMLDLVSCGRRKWRPDVISYTNVIWG 608
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 45/117 (38%), Gaps = 1/117 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEM-RQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
V +N IK +C + +M +Q C P +TYN +L L K + +A L
Sbjct: 456 VPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLT 515
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
E+ R TY + SC G +A +M+ G P T I Y
Sbjct: 516 REIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAY 572
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 117/254 (46%), Gaps = 6/254 (2%)
Query: 242 SKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVI-----KKTERKV 296
+KA + + V + + + G + SG LI +G ++ A ++ K+ +RK
Sbjct: 21 AKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTMRLKRFKRKA 80
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
Y+ +I +C+ + R+L+ +M + P LTY ++ LCK + DA +EE
Sbjct: 81 IAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGPIVERLCKTKRIDDALATVEE 139
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
M R PDA Y + C+ K + A F +MVK+ + P + T+ I G +R
Sbjct: 140 MATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWR 199
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
E AY+ A K + + Y+ L K + V AK+V +M+++ PNV Y
Sbjct: 200 IETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTT 259
Query: 477 VLKHLHTSHQEHMA 490
++ L S + A
Sbjct: 260 LIDGLSKSGKVQAA 273
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 91/196 (46%)
Query: 286 KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNG 345
K V ++ V YN LI +C+ + +L EM G P ++YN ++ CK
Sbjct: 174 KMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKK 233
Query: 346 QDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
A ++ ++M+ NC P+ +TY I + GK A + MVK+G+ P +AT++
Sbjct: 234 DLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYS 293
Query: 406 AFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKN 465
I G+ R ++A+K + + + + + Y++L + + + A + M +
Sbjct: 294 CLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQR 353
Query: 466 GLRPNVSVYRRVLKHL 481
P V Y +L+ L
Sbjct: 354 RCHPTVVTYNTLLRAL 369
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 59/133 (44%), Gaps = 8/133 (6%)
Query: 263 SCLVSG---VRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
SCL+ G VR + E +L + V + V YNIL+ +CR + L
Sbjct: 293 SCLIDGFCKVRRVDEAHKLL-----EQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLF 347
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
M Q C P +TYN +L LC + Q A L EM+ + C PDAITY+ R
Sbjct: 348 RGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRA 407
Query: 380 GKFDVAFNFFNQM 392
GK A +M
Sbjct: 408 GKVHEAQELMEKM 420
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 80/190 (42%), Gaps = 13/190 (6%)
Query: 234 GFLPVLISSKALT-----KKGIWRVVEVLNQVGGSCLVSGV---RALIEMFSVLGLYEMA 285
G++P +S L KK + +V +++ S V V LI+ S G + A
Sbjct: 214 GYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAA 273
Query: 286 KYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
V+ +K V+ Y+ LI C+ LL +M G P +TYN +L
Sbjct: 274 AEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNS 333
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
LC+ + DA +L M R CHP +TY + C + D A + +M+ +G P
Sbjct: 334 LCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPD 393
Query: 401 LATHAAFIKG 410
T+ G
Sbjct: 394 AITYDTLAWG 403
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 64/165 (38%), Gaps = 1/165 (0%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P T+N V K G+ E+ + M+ A Y I I C+VG FD A+
Sbjct: 8 PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
+ M + + + ++ I R E+A + + A +Y + Y + K
Sbjct: 68 LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMA-RYAPPDALTYGPIVERLCK 126
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
A + EM G++P+ +Y VL L + A+ L
Sbjct: 127 TKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 171
>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 81/183 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ C D D+L EM +P +TY V+ LCK G+ ++ +LL+ M
Sbjct: 580 YTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMY 639
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R PD ITY I C+ AF NQM++ LQP T+ I G ++ +
Sbjct: 640 ARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLK 699
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA + +V D+ + + Y+ + H + A +M++ G ++ Y V+
Sbjct: 700 DADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVI 759
Query: 479 KHL 481
L
Sbjct: 760 NRL 762
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 86/195 (44%), Gaps = 3/195 (1%)
Query: 280 GLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
L+ +AK + + ++ YN L+ + R D D+ E++ G T ++
Sbjct: 187 ALFVLAKMKVLNLQVSIATYNSLLYNL-RHTDIM--WDVYNEIKASGVPQNEYTNPILID 243
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
LC+ + DA L E G P +++ + C++G DVA +FF M+K GL P
Sbjct: 244 GLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLP 303
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
+ ++ + G + E+A ++ + + Y++LA+ A V+
Sbjct: 304 DVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVV 363
Query: 460 SEMMKNGLRPNVSVY 474
M+ NGL P++ Y
Sbjct: 364 QRMLLNGLNPDLVTY 378
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 75/181 (41%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +N L+ C+ + M + G P +YN +L LC G +A E
Sbjct: 270 VVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTN 329
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M PD +TY I +G A+ +M+ GL P L T+ I G+
Sbjct: 330 DMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMG 389
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E+++K + S + Y++L S K+ A +L EM GL+P++ Y
Sbjct: 390 NIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYS 449
Query: 476 R 476
R
Sbjct: 450 R 450
>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 783
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 143/359 (39%), Gaps = 13/359 (3%)
Query: 126 PYATPKQVSEIIELLRSGDSETESKLLSMSVSLSNASVIEILRVLNSEKVSALCFLKYMR 185
P AT +VS IIE L + + V S I VL + + L F ++
Sbjct: 31 PIATSIEVSTIIETLDPMED-------GLKVISSRIRSYTITSVLQEQPDTRLGFRLFIW 83
Query: 186 EIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKAL 245
+ + + L+I + + +E ++L + + ++ +AF L S +
Sbjct: 84 SLKSWHLRCRTVQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGM 143
Query: 246 TKK-----GIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYN 300
+K G+ R + + L+ E F +L L + + V Y
Sbjct: 144 DEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAF-LLALAVYNQMLKCNLNPDVVTYG 202
Query: 301 ILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGR 360
ILI +C+ C + L EM G P + Y+ VL LC+ + DA L +M
Sbjct: 203 ILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRAS 262
Query: 361 NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
C+ D ITY + + C+ G D AF + K G + + I G F RYE+A
Sbjct: 263 GCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEA 322
Query: 421 YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
+ + + MLY+++ + A +L EM + GLRP+ Y ++K
Sbjct: 323 HMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIK 381
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 94/231 (40%), Gaps = 37/231 (16%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE--- 355
Y+I++ +C+ + L +MR GC +TYN +L CK+G DA LL+
Sbjct: 236 YSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLT 295
Query: 356 --------------------------------EMLGRNCHPDAITYEIFIVYSCRVGKFD 383
+ML N PD + Y I I + G+
Sbjct: 296 KDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVT 355
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKS-SSNMLYSLL 442
A +M +RGL+P + A IKG F Y D + + L K+ +N YS+L
Sbjct: 356 EALTLLGEMTERGLRPDTICYNALIKG-FCDMGYLDEAESLRLEISKHDCFPNNHTYSIL 414
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
KN A+++ EM K G P+V + ++ L +++ A+ L
Sbjct: 415 ICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLL 465
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 90/215 (41%), Gaps = 33/215 (15%)
Query: 220 DFNVYQVCLN--------EKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGV-R 270
D Y V LN + AF L +L TK G +L +G CL++G+ R
Sbjct: 267 DLITYNVLLNGFCKSGYLDDAFTLLQLL------TKDG-----HILGVIGYGCLINGLFR 315
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
A YE A +K R+ V Y I+I+ + + LL EM +
Sbjct: 316 A--------RRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTER 367
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P T+ YN ++ C G +A L E+ +C P+ TY I I C+ G + A
Sbjct: 368 GLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKA 427
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
+ F +M K G P + T + I G R E+A
Sbjct: 428 QHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEA 462
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ YNILI C+ + G L EM+ G P ++TY ++ L + G++ DA E+ E
Sbjct: 526 IRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFE 585
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK--RGLQ 398
+M+ + C P++ TY+ + +SCR +A + + + ++ RG +
Sbjct: 586 QMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWE 630
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 112/265 (42%), Gaps = 30/265 (11%)
Query: 240 ISSKALTKKGIWRVVEVLNQVGGSCLVSGVR-------ALIEMFSVLGLYEMAKYVIKKT 292
I + L+++G RV E L +G G+R ALI+ F +G + A+ + +
Sbjct: 343 IMIRGLSQEG--RVTEALTLLG-EMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEI 399
Query: 293 ERKVSY-----YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQD 347
+ + Y+ILI MC+ + + EM ++GC P +T+N ++ LCK +
Sbjct: 400 SKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRL 459
Query: 348 ADACELLEEM-------------LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
+A L +M G + D + ++ + C G A+ Q+V
Sbjct: 460 EEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVD 519
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPV 453
G+ P + T+ I G+ F A+K + + + S +L+ L+ N
Sbjct: 520 SGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNED 579
Query: 454 MAKNVLSEMMKNGLRPNVSVYRRVL 478
A + +M+K G P S Y+ ++
Sbjct: 580 -ALEIFEQMVKKGCVPESSTYKTIM 603
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 86/204 (42%), Gaps = 18/204 (8%)
Query: 280 GLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQV--------- 325
GL A+++ K+ E+ V +N LI +C+ + R L +M V
Sbjct: 422 GLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRL 481
Query: 326 --GCEPI--TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
G + + + ++ LC++G A +LL +++ PD TY I I C+ G
Sbjct: 482 SQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGN 541
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
+ AF F +M +G P T+ I G + R EDA + K + Y
Sbjct: 542 INGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKT 601
Query: 442 LASLHDKNNNPVMAKNVLSEMMKN 465
+ + + NN +A +V + +++
Sbjct: 602 IMTWSCRENNISLALSVWMKYLRD 625
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 118/283 (41%), Gaps = 12/283 (4%)
Query: 209 DDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQ-VGGSCL-- 265
D +E LL + L++ F L + L RV+EVL Q + C+
Sbjct: 336 DRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVD----RVIEVLEQMLEHGCMPD 391
Query: 266 VSGVRALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLV 320
V +I F GL + A +++ Y I++K +C + +L+
Sbjct: 392 VITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMS 451
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M Q GC P +T+N ++ LCK G A ELL++ML C PD I+Y I + G
Sbjct: 452 QMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAG 511
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
D A N MVK+G+ P +++ R + D S +LY+
Sbjct: 512 NTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYN 571
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHT 483
+ S K A L+ M+ +G PN S Y +++ L +
Sbjct: 572 AVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLAS 614
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 87/186 (46%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V YN +++ +C + +DL+ EM GC P +T++ ++G LC+NG E
Sbjct: 214 EPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHE 273
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+ +M C PD Y I C+ + +VA N+M GL P + + +KG
Sbjct: 274 VHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLC 333
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
R+E+A + DK ++ +++L +N VL +M+++G P+V
Sbjct: 334 SADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVI 393
Query: 473 VYRRVL 478
Y V+
Sbjct: 394 TYTTVI 399
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN L+K +C ++ LL EM C +T+N ++ LC+NG E+LE
Sbjct: 322 VVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLE 381
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML C PD ITY I C+ G D A M G +P ++ +KG
Sbjct: 382 QMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAE 441
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R+ DA + + + + + ++ L + K A +L +M+ NG P++ Y
Sbjct: 442 RWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYS 501
Query: 476 RVLKHL 481
V+ L
Sbjct: 502 TVIDGL 507
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 82/186 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y +I +C+ + R +L M G P + YN +L LC + +A LL
Sbjct: 287 VRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLA 346
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM ++C D +T+ I + + C+ G D QM++ G P + T+ I G+
Sbjct: 347 EMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEG 406
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
++A + A + + Y+++ V A+ ++S+M++ G PN +
Sbjct: 407 LIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFN 466
Query: 476 RVLKHL 481
++ L
Sbjct: 467 TLINFL 472
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/209 (19%), Positives = 84/209 (40%), Gaps = 1/209 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L++ +C R +L +M + GC P Y+ L C+ A +L ++
Sbjct: 114 YFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLH 173
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR-GLQPRLATHAAFIKGYFIFYRY 417
GR C D + + C G D A ++ G +P + ++ A ++G + R+
Sbjct: 174 GRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRW 233
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ + + +S L +N V ++M ++G P+V +Y +
Sbjct: 234 GHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATI 293
Query: 478 LKHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
+ + + +A+ + +R S L +V
Sbjct: 294 IDGVCKEERLEVARGILNRMPSYGLSPNV 322
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 31/68 (45%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P TY ++ LC G+ ADA +L++M R C P Y + + +CR F A
Sbjct: 109 PNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGV 168
Query: 389 FNQMVKRG 396
+ RG
Sbjct: 169 LRDLHGRG 176
>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Vitis
vinifera]
Length = 829
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 81/183 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ C D D+L EM +P +TY V+ LCK G+ ++ +LL+ M
Sbjct: 588 YTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMY 647
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R PD ITY I C+ AF NQM++ LQP T+ I G ++ +
Sbjct: 648 ARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLK 707
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA + +V D+ + + Y+ + H + A +M++ G ++ Y V+
Sbjct: 708 DADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVI 767
Query: 479 KHL 481
L
Sbjct: 768 NRL 770
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 5/208 (2%)
Query: 276 FSVLGLYEMAKYVIKKT-----ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPI 330
F +LGL A V+++ + Y ILI C+ + + L +M G +
Sbjct: 350 FRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLS 409
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN 390
+TY +L LCK+G+ +A LL EM PD +TY + I C+ G + A +
Sbjct: 410 IVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYE 469
Query: 391 QMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNN 450
+M + + P +A I G F +A Y + +LY+++ + K
Sbjct: 470 EMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLG 529
Query: 451 NPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
N A ++++ G+ P + + ++
Sbjct: 530 NIGEAVRSYKQIIEKGISPTIVTFNSLI 557
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 86/195 (44%), Gaps = 3/195 (1%)
Query: 280 GLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
L+ +AK + + ++ YN L+ + R D D+ E++ G T ++
Sbjct: 187 ALFVLAKMKVLNLQVSIATYNSLLYNL-RHTDIM--WDVYNEIKASGVPQNEYTNPILID 243
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
LC+ + DA L E G P +++ + C++G DVA +FF M+K GL P
Sbjct: 244 GLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLP 303
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
+ ++ + G + E+A ++ + + Y++LA+ A V+
Sbjct: 304 DVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVV 363
Query: 460 SEMMKNGLRPNVSVY 474
M+ NGL P++ Y
Sbjct: 364 QRMLLNGLNPDLVTY 378
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 77/186 (41%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +N L+ C+ + M + G P +YN +L LC G +A E
Sbjct: 270 VVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTN 329
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M PD +TY I +G A+ +M+ GL P L T+ I G+
Sbjct: 330 DMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMG 389
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E+++K + S + Y++L S K+ A +L EM GL+P++ Y
Sbjct: 390 NIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYS 449
Query: 476 RVLKHL 481
++ L
Sbjct: 450 VLIHGL 455
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 90/205 (43%), Gaps = 3/205 (1%)
Query: 277 SVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNY 336
+V+ L+EM +K + Y++LI +C+R + +L EM P + +
Sbjct: 429 AVILLHEMEVIGLKP---DLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSA 485
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
++ L + G ++A + + + + I Y I I ++G A + Q++++G
Sbjct: 486 IISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKG 545
Query: 397 LQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAK 456
+ P + T + I G+ + +A K + +++ Y+ L + + + +
Sbjct: 546 ISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMF 605
Query: 457 NVLSEMMKNGLRPNVSVYRRVLKHL 481
++L EM ++P Y V+K L
Sbjct: 606 DMLHEMEAKAIKPTQITYTVVVKGL 630
>gi|255559961|ref|XP_002520999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539836|gb|EEF41416.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 628
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 125/310 (40%), Gaps = 34/310 (10%)
Query: 201 VIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQV 260
VI CGR++ ++ ++ N+ CL F ++ L K N V
Sbjct: 126 VISMCGRMNSIGLLKNFIS-LNILLNCLCSVKRVFEGFVVFGMILRKGYRPNTRTFTNLV 184
Query: 261 GGSCLVSGVRALIEMFSVLGLYEMAKYVIK------------------------------ 290
G CL + + +F ++G+++ I
Sbjct: 185 KGLCLEGKIGEAVRVFKIMGVFDCRPSAITCGVLISGLCRTGNTCNALKLHEAMINGNSD 244
Query: 291 ---KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQD 347
+ V Y+ +I +C+ + ++ VEM++ G P +TY +L LC +
Sbjct: 245 FGINCKPTVVSYSCIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEW 304
Query: 348 ADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAF 407
+A L EM+ PD +T+ + I C+VGK A F+ MV+R ++P T+
Sbjct: 305 EEAKRLFIEMVDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNIL 364
Query: 408 IKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
I+GY + ++ K + +K YS+L + K++ A + EMM G+
Sbjct: 365 IEGYCLAGMVDEGKKIFLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGI 424
Query: 468 RPNVSVYRRV 477
+P V Y +V
Sbjct: 425 QPTVITYSKV 434
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 75/207 (36%), Gaps = 68/207 (32%)
Query: 272 LIEMFSVLGLYEMAKYVI-----KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LIE + + G+ + K + K+ + Y+IL+K C+ + G L EM G
Sbjct: 364 LIEGYCLAGMVDEGKKIFLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDRG 423
Query: 327 CEPITLTY----------------------------NYVLGVLCKNGQDADAC------- 351
+P +TY N L LCKNG ++A
Sbjct: 424 IQPTVITYSKVGDARKLFGEIQFQDMVLDSISYSIYNVYLDGLCKNGCVSEALDVFYGLE 483
Query: 352 ------------------------ELLEEMLGRNC----HPDAITYEIFIVYSCRVGKFD 383
E+ E+ R C PD +TY I I C+VG+
Sbjct: 484 NCKFASNVAIFNSLINGMCRSEKLEIAWELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQ 543
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKG 410
A++ F +M ++G P + T ++G
Sbjct: 544 KAYDLFLEMEEKGCAPNVVTFNTLMRG 570
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y I+I +C+ + DL +EM + GC P +T+N ++ LC N + ELL
Sbjct: 526 VVTYTIMIYGLCKVGQPQKAYDLFLEMEEKGCAPNVVTFNTLMRGLCLNSERPKIVELLH 585
Query: 356 EMLGRNCHPDAITYEIFI 373
+M R PDA T I +
Sbjct: 586 KMAARKLSPDASTLLIVM 603
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 49/113 (43%)
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
K V+ +N LI MCR + +L + +P +TY ++ LCK GQ A
Sbjct: 486 KFASNVAIFNSLINGMCRSEKLEIAWELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQKA 545
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
+L EM + C P+ +T+ + C + ++M R L P +T
Sbjct: 546 YDLFLEMEEKGCAPNVVTFNTLMRGLCLNSERPKIVELLHKMAARKLSPDAST 598
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 94/250 (37%), Gaps = 36/250 (14%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+G C V V+ +F ++ + +YV E YNILI+ C + +
Sbjct: 330 IGALCKVGKVKEASGLFDLM----VQRYV----EPSTRTYNILIEGYCLAGMVDEGKKIF 381
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHP--------------- 364
+ M C+ +Y+ ++ CK+ + A L EM+ R P
Sbjct: 382 LSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGIQPTVITYSKVGDARKLF 441
Query: 365 ----------DAITYEIFIVY---SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
D+I+Y I+ VY C+ G A + F + +A + I G
Sbjct: 442 GEIQFQDMVLDSISYSIYNVYLDGLCKNGCVSEALDVFYGLENCKFASNVAIFNSLINGM 501
Query: 412 FIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
+ E A++ ++ + Y+++ K P A ++ EM + G PNV
Sbjct: 502 CRSEKLEIAWELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQKAYDLFLEMEEKGCAPNV 561
Query: 472 SVYRRVLKHL 481
+ +++ L
Sbjct: 562 VTFNTLMRGL 571
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 91/218 (41%), Gaps = 32/218 (14%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
+ YN LI + DF L EM + C P +TY ++ LCK G+ DA +LL+E
Sbjct: 46 AIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDE 105
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
M + C P+ TY + + C K D A +M RG P + T+ +FIKG R
Sbjct: 106 MRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDR 165
Query: 417 YEDAYKYV------------------VLSADKYKSSSNML--------------YSLLAS 444
++A K++ + + S+S ML YS L
Sbjct: 166 VDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLID 225
Query: 445 LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLH 482
K A +L M+K G RPN+ Y +L LH
Sbjct: 226 GFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALH 263
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 73/147 (49%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ LI C+ + + LL M ++GC P + YN +LG L + G A ++L
Sbjct: 217 VVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLV 276
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM R PD ++Y I C+ + A F++MV+RG P ++++ ++
Sbjct: 277 EMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKK 336
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLL 442
+DA V + +KY+ +LY++L
Sbjct: 337 ELDDAITLVEQAREKYQIVDILLYTVL 363
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 79/187 (42%), Gaps = 5/187 (2%)
Query: 296 VSYYNILIKEMCRRCD-FKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
V YN IK +C+ CD R L M P ++Y V+ LCK+G A +L
Sbjct: 150 VVTYNSFIKGLCK-CDRVDEARKFLARMPVT---PDVVSYTTVINGLCKSGDLDSASRML 205
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
++M R C PD +TY I C+ G+ + A + M+K G +P + + + +
Sbjct: 206 DQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRL 265
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
A +V + + + Y+ K AK V M++ G PN S Y
Sbjct: 266 GHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSY 325
Query: 475 RRVLKHL 481
+++ L
Sbjct: 326 SMLVEEL 332
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 66/155 (42%)
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
C+P T+ +L LC++ Q A +LL M C PD Y I + F AF
Sbjct: 6 CQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAF 65
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
F +MVK P + T+ + G R +DA K + DK S + Y+++
Sbjct: 66 KFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGL 125
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ AK +L EM G P+V Y +K L
Sbjct: 126 CEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGL 160
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 82/194 (42%), Gaps = 3/194 (1%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
S Y++L++E+C++ + L+ + R+ L Y +L LCK G+ +AC L +
Sbjct: 323 SSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSK 382
Query: 357 MLGRN-CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+L C PD Y + + C+ + D A QM++R + T + G +
Sbjct: 383 VLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNC-CNVVTWNILVHGLCVDD 441
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R DA ++ D+ + Y L K A + E +K G P+V Y
Sbjct: 442 RLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYS 501
Query: 476 RVLKHL-HTSHQEH 488
++ L H + E
Sbjct: 502 ALITGLVHENMAEE 515
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 84/187 (44%), Gaps = 8/187 (4%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K E V +YN+++ C+R + +M + C + +T+N ++ LC + + +D
Sbjct: 387 KICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCCNV-VTWNILVHGLCVDDRLSD 445
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A +L M+ PD +TY + C+ GK A F + VK G P + T++A I
Sbjct: 446 AETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALIT 505
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
G E+AY + L++ + + +N + + + E++++ + P
Sbjct: 506 GLVHENMAEEAYLL-------FTKLDVALWNAMILGYAENGSGDLGLKLFVELIESDVEP 558
Query: 470 NVSVYRR 476
N + +
Sbjct: 559 NARTFGK 565
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 58/135 (42%)
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
M+ ++C PDA T+ I + CR + + A +M + G P A + A I GY
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
+ A+K++ + + + Y+ + K A +L EM G PN+ Y
Sbjct: 61 FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120
Query: 477 VLKHLHTSHQEHMAK 491
+++ L + AK
Sbjct: 121 IVEGLCEERKLDEAK 135
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%)
Query: 283 EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLC 342
++ K ++++ V +NIL+ +C +L+ M G P +TY ++ +C
Sbjct: 414 QIHKQMLERNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMC 473
Query: 343 KNGQDADACELLEEMLGRNCHPDAITYEIFI 373
K G+ A A EL EE + C PD +TY I
Sbjct: 474 KCGKSAAALELFEEAVKGGCVPDVVTYSALI 504
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 103/243 (42%), Gaps = 39/243 (16%)
Query: 275 MFSVLGLY-EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLT 333
+F +GL EM + K + YN LI +C+ K LL+EM GC P ++T
Sbjct: 14 VFEAMGLIREMGR---KSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVT 70
Query: 334 YNYVLGVLCKNGQDADACELLE-----------------------------------EML 358
++ LCK+G+ +A ELLE EML
Sbjct: 71 CTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEML 130
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
G+ + +TY + CR+G++ A N M + G+ P + T+ I G R
Sbjct: 131 GKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRAT 190
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + L +K + SN+ Y++L S K + A +L M++ G + +V Y ++
Sbjct: 191 HAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLM 250
Query: 479 KHL 481
K L
Sbjct: 251 KGL 253
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 114/268 (42%), Gaps = 14/268 (5%)
Query: 243 KALTKKGIWRVVEVLNQVGGSCLVSG-VRALIEMFSVLGLYEMAKYVIKKTERKVSY-YN 300
+ + KKG + N + G CL +G ++ +E++ K V+ S+ Y+
Sbjct: 304 RKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELW---------KQVLDLGFVPNSFTYS 354
Query: 301 ILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGR 360
ILI C+ + L EMR G P YN ++ LCK G A L +EM
Sbjct: 355 ILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNA 414
Query: 361 NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
NC PD I++ I + + G F +MV+ GL+P T + I ++A
Sbjct: 415 NCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEA 474
Query: 421 YKYVV-LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
+ + A + + + SLL L K + + N+L +M G + + +L
Sbjct: 475 KSALERMVASGFTPDALVYDSLLKGLSSKGDTTEII-NLLHQMAAKGTVLDRKIVSTILT 533
Query: 480 HL-HTSHQEHMAKCLSSRYSSLSLGSSV 506
L H+ + + + L + + S G+S+
Sbjct: 534 CLCHSIQEVDVMELLPTFFQGTSEGASI 561
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 79/182 (43%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
NI++K +CR L+ EM + P ++YN ++ LCK + +A LL EM
Sbjct: 2 NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
C P+++T + C+ G+ D A M K+G + + I G+ +
Sbjct: 62 AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
+ K S++ + YS L + A VL+ M ++G+ P+V Y ++
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181
Query: 480 HL 481
L
Sbjct: 182 GL 183
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 63/133 (47%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K V Y+ L+ +CR +K +L M + G P +TY ++ LCK+G+
Sbjct: 132 KGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATH 191
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A +LL M+ + P +TY + + C+ G AF M+++G + + T+ +K
Sbjct: 192 AMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMK 251
Query: 410 GYFIFYRYEDAYK 422
G + ++A K
Sbjct: 252 GLCDKGKVDEALK 264
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 66/137 (48%), Gaps = 3/137 (2%)
Query: 278 VLGLYEMAKYVIKKTER-KVSYYNILIKEMCRRCDFKGPRDLLVEM--RQVGCEPITLTY 334
V+ +++ + +I+K ++ V YN L+K +C + L M + EP T+
Sbjct: 224 VIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTF 283
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N ++G LCK G+ A ++ +M+ + + +TY + + + GK A + Q++
Sbjct: 284 NMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLD 343
Query: 395 RGLQPRLATHAAFIKGY 411
G P T++ I G+
Sbjct: 344 LGFVPNSFTYSILIDGF 360
>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g11690-like [Glycine max]
Length = 556
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 84/182 (46%), Gaps = 1/182 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI E C + EMR+ G +TYN ++G LC+ + +A +L+ ++
Sbjct: 266 YNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVN 325
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ +TY I I C VGK D A FNQ+ GL P L T+ I GY
Sbjct: 326 KVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLA 385
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A V ++ + S + Y++L + N A + S M K+GL P+V Y VL
Sbjct: 386 GALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTY-SVL 444
Query: 479 KH 480
H
Sbjct: 445 IH 446
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 129/321 (40%), Gaps = 41/321 (12%)
Query: 194 NSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRV 253
N I + +ID C + D + L + + N+ + L + L ++G +++
Sbjct: 192 NVVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREG-FQM 250
Query: 254 VEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCR 308
E +N+ G LI + G+ + A V + K V YNILI +CR
Sbjct: 251 YENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCR 310
Query: 309 RCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQD--------------------- 347
F L+ ++ +VG P +TYN ++ C G+
Sbjct: 311 GKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVT 370
Query: 348 --------------ADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
A A +L++EM R +TY I I R+ D A + M
Sbjct: 371 YNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLME 430
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPV 453
K GL P + T++ I G + ++A K + + ++++Y+ + + K +
Sbjct: 431 KSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSY 490
Query: 454 MAKNVLSEMMKNGLRPNVSVY 474
A +L+EM+ +G+ PNV+ +
Sbjct: 491 RALRLLNEMVHSGMVPNVASF 511
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 81/184 (44%), Gaps = 2/184 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y LI C+ D ++L +M ++G P TY+ ++ K G + ++ E
Sbjct: 193 VVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYE 252
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M P+A Y I C G D AF F +M ++G+ + T+ I G
Sbjct: 253 NMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGK 312
Query: 416 RYEDAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
++ +A K +V +K S N++ Y++L + A + +++ +GL P + Y
Sbjct: 313 KFGEAVK-LVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTY 371
Query: 475 RRVL 478
++
Sbjct: 372 NTLI 375
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 48/107 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI C + K + ++ +P ++ YN ++ CK G A LL
Sbjct: 438 VYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLN 497
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLA 402
EM+ P+ ++ + CR K+ A QM+ GL+P ++
Sbjct: 498 EMVHSGMVPNVASFCSTMGLLCRDEKWKEAELLLGQMINSGLKPSVS 544
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 67/176 (38%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ I+I C F LL + + G P + Y ++ CKNG A L +M
Sbjct: 161 FGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKMD 220
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ TY + + + G F + M + G+ P + I Y +
Sbjct: 221 RLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVD 280
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
A+K +K + M Y++L + A ++ ++ K GL PN+ Y
Sbjct: 281 KAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTY 336
>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 670
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%)
Query: 289 IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
+K V Y+ L+ +C+ LL EM+ GC P +T+N ++ L KNG +
Sbjct: 226 LKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLS 285
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
A +L++ M + C P+ +TY I C GK D A + +MV P T+ I
Sbjct: 286 RAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTII 345
Query: 409 KGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLR 468
G R ED ++ ++ + ++ +YS L S K A + EM + G +
Sbjct: 346 NGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCK 405
Query: 469 PNVSVY 474
PNV VY
Sbjct: 406 PNVVVY 411
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 83/181 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N+LI + + D L+ M GC P +TYN ++ LC G+ A LLE+M+
Sbjct: 271 FNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMV 330
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C P+ +TY I + + + + M +RG + +++ I G F + E
Sbjct: 331 SSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSE 390
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + A+K + ++Y ++ P A+++L EM+ G PN Y ++
Sbjct: 391 NAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLM 450
Query: 479 K 479
K
Sbjct: 451 K 451
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 108/231 (46%), Gaps = 12/231 (5%)
Query: 256 VLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGP 315
V N+V + L+ G+ ++ L L E K V K Y +I + ++ +
Sbjct: 300 VPNEVTYNTLIHGLCLKGKLDKALSLLE--KMVSSKCVPNQVTYGTIINGLVKQRRAEDG 357
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
+L+ M + G + Y+ ++ L K G+ +A L +EM + C P+ + Y FI
Sbjct: 358 VHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDG 417
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
CR K D A + +M+ +G P T+++ +KG F++ D+ K +++ K S
Sbjct: 418 LCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKG---FFKKGDSQKAILVW--KEMMSQ 472
Query: 436 NMLY-----SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+M + S+L + ++ A V + M+ GL+P+V Y ++K L
Sbjct: 473 DMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGL 523
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 39/85 (45%)
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G +P LTYN ++ LCK GQ A + EM +NC+PD TY + C+ + D A
Sbjct: 193 GFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEA 252
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKG 410
++M G P T I
Sbjct: 253 VFLLDEMQAEGCLPNPVTFNVLIDA 277
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 60/147 (40%), Gaps = 27/147 (18%)
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDF 312
VV + + G C V V +++F YEM + K+ V YNIL +CR+ +
Sbjct: 513 VVAYSSMIKGLCDVGSVDKGLKLF-----YEM-QCQEPKSRPDVVTYNILFNALCRQDNL 566
Query: 313 KGPRDLLVEMRQVGCEPITLTYNYVLGV---------------------LCKNGQDADAC 351
DLL M GC+P +LT N L L K + A
Sbjct: 567 TRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVRLLKRERKLSAL 626
Query: 352 ELLEEMLGRNCHPDAITYEIFIVYSCR 378
++EEML R P+ T+ I +C+
Sbjct: 627 RIVEEMLLRFLPPEPSTWSRVIQRTCK 653
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 67/182 (36%), Gaps = 16/182 (8%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
++L+ +C + + M G +P + Y+ ++ LC G +L EM
Sbjct: 482 SVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQC 541
Query: 360 RN--CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
+ PD +TY I CR A + N M+ G P T F+
Sbjct: 542 QEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFL--------- 592
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
E + + D ++ LL K + A ++ EM+ L P S + RV
Sbjct: 593 ETLRERINPPQDGRLFLDELVVRLL-----KRERKLSALRIVEEMLLRFLPPEPSTWSRV 647
Query: 478 LK 479
++
Sbjct: 648 IQ 649
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 90/183 (49%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN +I C R +G R +L M+ G EP + TY ++ +CK G+ +A +LE
Sbjct: 271 VVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILE 330
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M P A+TY I C G AF + ++MV+R + P ++T+ I F+
Sbjct: 331 KMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEG 390
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ ++A + D ++ Y++L + + + N A N+ EM+ G++P + Y
Sbjct: 391 KMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYT 450
Query: 476 RVL 478
++
Sbjct: 451 SLI 453
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 80/176 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI + +R K DL ++ + G P + +N ++ C NG A LL+EM
Sbjct: 449 YTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMD 508
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
RN PD +TY + CR GK + A +M +RG++P ++ I GY
Sbjct: 509 KRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDIN 568
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
DA+ + + + Y+ L KN +A+ +L EM+ G+ P+ S Y
Sbjct: 569 DAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTY 624
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 88/195 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNILI CR + K +L EM G +P +TY ++ VL K + A +L E+++
Sbjct: 414 YNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKII 473
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD I + I C G D AF +M KR + P T+ ++G + E
Sbjct: 474 REGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVE 533
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + + + ++ Y+ L S + K + A + EM+ G P + Y ++
Sbjct: 534 EARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALI 593
Query: 479 KHLHTSHQEHMAKCL 493
+ L + Q +A+ L
Sbjct: 594 QGLCKNQQGDLAEEL 608
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 97/238 (40%), Gaps = 44/238 (18%)
Query: 245 LTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLY-EMAKYVIKKTERKVSYYNILI 303
+ +KG+ +E N ++S L + +V LY EM + IK T V +NI+I
Sbjct: 192 MKEKGVVPKIETFN-----AMLSLFLKLNQTETVWVLYAEMFRLKIKST---VYTFNIMI 243
Query: 304 KEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH 363
+C+ K +D + M +G +P +TYN V+ C G+ A +L+ M R
Sbjct: 244 NVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVE 303
Query: 364 PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY 423
PD+ TY I C+ GK + A +M + GL P T+ I GY K
Sbjct: 304 PDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGY--------CNKG 355
Query: 424 VVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
++ A Y+ EM++ + P VS Y ++ L
Sbjct: 356 DLVKAFGYRD---------------------------EMVRRAILPTVSTYNLLIHAL 386
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 107/241 (44%), Gaps = 36/241 (14%)
Query: 206 GRLDDYETMRQLLNDFNV------YQVCLN--------EKAF---------GFLPVLIS- 241
G++D+ + M + + D + Y + +N +KAF G P L++
Sbjct: 390 GKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTY 449
Query: 242 -------SKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTER 294
SK K + E + + G S + ALI+ G + A ++K+ ++
Sbjct: 450 TSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDK 509
Query: 295 K-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
+ YN L++ CR + R+LL EM++ G P ++YN ++ K G D
Sbjct: 510 RNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDIND 569
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A + +EML +P +TY I C+ + D+A +MV +G+ P +T+ + I+
Sbjct: 570 AFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIE 629
Query: 410 G 410
G
Sbjct: 630 G 630
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 79/188 (42%), Gaps = 3/188 (1%)
Query: 283 EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLC 342
EM + I T VS YN+LI + ++ +M G P ++TYN ++ C
Sbjct: 366 EMVRRAILPT---VSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYC 422
Query: 343 KNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLA 402
+ G A L +EM+ + P +TY I + + A + F ++++ G P L
Sbjct: 423 RCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLI 482
Query: 403 THAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM 462
A I G+ + A+ + + + Y+ L + A+ +L EM
Sbjct: 483 MFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEM 542
Query: 463 MKNGLRPN 470
+ G+RP+
Sbjct: 543 KRRGIRPD 550
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 123/289 (42%), Gaps = 15/289 (5%)
Query: 211 YETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQ-VGGSCL--VS 267
++ +LL++ L++ F L L RV+E+L Q + C+ V
Sbjct: 337 WKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVD----RVIELLEQMLSHGCMPDVI 392
Query: 268 GVRALIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
+I F GL + A ++K + Y I++K +C + +L+ +M
Sbjct: 393 TYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
Q GC P +T+N ++ LCK G A ELL++ML C PD I+Y I + GK
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 512
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
+ A N MV +G+ P +++ R + D S +LY+ +
Sbjct: 513 EEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAV 572
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
S K A + + M+ NG PN S Y ++K L + E +AK
Sbjct: 573 ISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLAS---EGLAK 618
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 5/232 (2%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKK-----TERKVSYYNILIKEM 306
RV+E ++ G + ++ G + A +++K E + YN ++K +
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
C + +L+ EM +V C P +T+N ++G LC+NG E+L +M C PD
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
Y I C+ G +VA N+M GL+P + + +KG R+++A + +
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346
Query: 427 SADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
K ++ +++L +N +L +M+ +G P+V Y V+
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVI 398
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 90/207 (43%), Gaps = 5/207 (2%)
Query: 280 GLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
GL+E V+ + + Y +I +C+ + ++L M G +P + Y
Sbjct: 265 GLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCY 324
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N VL LC + +A ELL EM ++C D +T+ I + + C+ G D QM+
Sbjct: 325 NTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLS 384
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM 454
G P + T+ I G+ ++A + + + + Y+++ V
Sbjct: 385 HGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVD 444
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A+ ++S+M++ G PN + ++ L
Sbjct: 445 AEELMSQMIQQGCPPNPVTFNTLINFL 471
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 87/199 (43%), Gaps = 2/199 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+++++ CR F+ +L M GC T N VL +C+ G +A LL ++
Sbjct: 149 YHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLA 208
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C D ++Y + C ++ ++MV+ P + T I GY
Sbjct: 209 FFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLI-GYLCRNGLF 267
Query: 419 DAYKYVVLSADKYKSSSNM-LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ V+ ++ + ++ +Y+ + K + +A +L+ M GL+PNV Y V
Sbjct: 268 ERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTV 327
Query: 478 LKHLHTSHQEHMAKCLSSR 496
LK L ++ + A+ L S
Sbjct: 328 LKGLCSAERWKEAEELLSE 346
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 88/205 (42%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
+++ +C R ++L EM GC PI Y+ +L C++G ++ +LE M +
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG 176
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
C D + + C G D A ++ G + + ++ A +KG + R+ D
Sbjct: 177 CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE 236
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + + + + ++ L +N VL++M ++G P++ +Y ++ +
Sbjct: 237 ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGI 296
Query: 482 HTSHQEHMAKCLSSRYSSLSLGSSV 506
+A + +R S L +V
Sbjct: 297 CKEGHLEVANEILNRMPSYGLKPNV 321
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 118/246 (47%), Gaps = 14/246 (5%)
Query: 254 VEVLNQVGGSCLVSGVRALIEMFSVL-----------GLYEMAKYVIKKT-ERKVSYYNI 301
VE+ ++V G + G + MF+++ Y++ + +I+K V + I
Sbjct: 213 VELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTI 272
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
LI +C+ + LL +M GC P +TY+ V+ LCK GQ DA EL + M RN
Sbjct: 273 LITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRN 332
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
C P+ +T+ I I C+ + + A +++M + G P + T+ + I G ++ ++A+
Sbjct: 333 CPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAF 392
Query: 422 KYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR-VLK 479
+ + S++N + YS L + A + S ++ G P+++ Y +L+
Sbjct: 393 QLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILE 452
Query: 480 HLHTSH 485
+ TS
Sbjct: 453 YCKTSR 458
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 83/181 (45%), Gaps = 2/181 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ILI+ D LL EM+ G E + + ++ LC G+ +A E M
Sbjct: 60 YGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM- 118
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
++C PD +TY + C+ GKFD A +MV +G P T + I G F E
Sbjct: 119 AKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEE 178
Query: 419 DAYKYVVLSADKYKSSSNMLY-SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
A++ + + +S+ + +++ L +K N+ +A VL ++ G P V ++ V
Sbjct: 179 QAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLV 238
Query: 478 L 478
+
Sbjct: 239 I 239
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 95/219 (43%), Gaps = 1/219 (0%)
Query: 269 VRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCE 328
++ L + V+ E + + K V Y L+ +C+ F + +L EM GC
Sbjct: 99 MKGLCDAGRVVEALEHFRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCA 158
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC-RVGKFDVAFN 387
P T+T++ ++ LCK G + A +LE+++ R +E I C + ++A
Sbjct: 159 PDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASK 218
Query: 388 FFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHD 447
++ +G P + I G+ + AYK + + +K + +++L +
Sbjct: 219 VLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLC 278
Query: 448 KNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
K N A+ +L +M+ G PNV Y V+ L Q
Sbjct: 279 KANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQ 317
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 65/143 (45%), Gaps = 5/143 (3%)
Query: 267 SGVRALIEMFSVLGLYEMAKYVIKK-TER----KVSYYNILIKEMCRRCDFKGPRDLLVE 321
S V AL+E +G + AK ++ K +ER VS YN L+ + R + +
Sbjct: 552 SAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEA 611
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M G P T N V+ LC + DA EL++ M C PD T I C+ G+
Sbjct: 612 MVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGR 671
Query: 382 FDVAFNFFNQMVKRGLQPRLATH 404
D+A +M + GL+P TH
Sbjct: 672 ADLARKLLEEMTEAGLEPNDTTH 694
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 101/261 (38%), Gaps = 13/261 (4%)
Query: 254 VEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFK 313
V N V S L G AL M ++ M V K ++ Y LI E C+
Sbjct: 403 VSAANAVTYSTLFHGYAALGRMADACRIFSM--LVDKGFSPDLATYTSLILEYCKTSRAV 460
Query: 314 GPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFI 373
+L+ EM G P T + VLG L + A +L + M R C DA+ Y + +
Sbjct: 461 EVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVV 520
Query: 374 VYSCRVGKFDVAFNFFNQMV---KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADK 430
R K D A Q++ R P + A ++ + +DA + + +++
Sbjct: 521 EGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSER 580
Query: 431 ----YKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
SS N L S L+ L + A V M+ G P +S V+ L ++ +
Sbjct: 581 GFAAAVSSYNRLLSGLSRLQRWDE----ATQVFEAMVSAGPAPEISTVNVVISWLCSAAK 636
Query: 487 EHMAKCLSSRYSSLSLGSSVE 507
A L R S L +E
Sbjct: 637 VDDAYELVQRMSKLGCCPDIE 657
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 60/156 (38%), Gaps = 1/156 (0%)
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N L +LC+ + +A L + R C P+ TY I I G D+A +M
Sbjct: 26 NCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKS 85
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM 454
G + H +KG R +A ++ A K + M Y+ L K
Sbjct: 86 SGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMA-KDCAPDVMTYTALVHALCKAGKFDE 144
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
A+ +L EM+ G P+ + ++ L E A
Sbjct: 145 AQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQA 180
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 82/217 (37%), Gaps = 48/217 (22%)
Query: 271 ALIEMFSVLGLYEMAKY---------VIKKTERKV----SYYNILIKEMCRRCDFKGPRD 317
ALI V G+ +K+ VI K +RK S + L++ +C+ +
Sbjct: 513 ALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQ 572
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
LL +M + G +YN +L L + + +A ++ E M+ P+ T + I + C
Sbjct: 573 LLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLC 632
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
K D A+ +M K G P + T I GY
Sbjct: 633 SAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYC------------------------- 667
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
K+ +A+ +L EM + GL PN + +
Sbjct: 668 ----------KSGRADLARKLLEEMTEAGLEPNDTTH 694
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%)
Query: 295 KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
++S N++I +C +L+ M ++GC P T N ++G CK+G+ A +LL
Sbjct: 620 EISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLL 679
Query: 355 EEMLGRNCHPDAITYEIF 372
EEM P+ T+++
Sbjct: 680 EEMTEAGLEPNDTTHDLL 697
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 89/179 (49%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN +I R + +G R +L MR G EP + TY ++ +CK G+ +A L +
Sbjct: 284 VVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFD 343
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M+ P+A+TY I C G + AF++ ++MVK+G+ P ++T+ + F+
Sbjct: 344 KMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEG 403
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
R +A + K + Y++L + + + N A ++ +EM+ G+ P Y
Sbjct: 404 RMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTY 462
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 98/235 (41%), Gaps = 17/235 (7%)
Query: 245 LTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTER-----KVSYY 299
+ +KGI +E N ++ +F L EMA + + R V +
Sbjct: 205 MKEKGIVPKIETCND------------MLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTF 252
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
NI++ +C+ K R+ + M +G +P ++YN ++ G A +L+ M
Sbjct: 253 NIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRV 312
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
+ PD+ TY I C+ G+ + A F++MV+ GL P T+ I GY E
Sbjct: 313 KGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLER 372
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
A+ Y K S Y+LL A +++ EM K G+ P+ Y
Sbjct: 373 AFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITY 427
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 86/183 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI + RR K DL ++ G P + +N ++ C NG A LL+EM
Sbjct: 462 YTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMD 521
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
++ PD +T+ + CR GK + A ++M +RG++P ++ I GY +
Sbjct: 522 RKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIK 581
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA++ + + + Y+ L KN +A+ +L EM+ G+ P+ S Y ++
Sbjct: 582 DAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLI 641
Query: 479 KHL 481
+ +
Sbjct: 642 EGM 644
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 6/161 (3%)
Query: 255 EVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVS-----YYNILIKEMCRR 309
++L+Q G S V A+++ G E A ++K+ +RK +N L++ CR
Sbjct: 484 KILDQ-GVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCRE 542
Query: 310 CDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITY 369
+ R LL EM++ G +P ++YN ++ + G DA + +EML +P +TY
Sbjct: 543 GKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTY 602
Query: 370 EIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
I C+ + D+A +MV +G+ P +T+ + I+G
Sbjct: 603 NALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEG 643
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 76/175 (43%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
VS YN+L+ + D++ EMR+ G P +TYN ++ + G A +L
Sbjct: 389 VSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHN 448
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EML + P +TY I R + A + F +++ +G+ P + A + G+
Sbjct: 449 EMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANG 508
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
E A+ + K + ++ L + A+ +L EM + G++P+
Sbjct: 509 NVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPD 563
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 98/249 (39%), Gaps = 40/249 (16%)
Query: 271 ALIEMFSVLGLYEMAKYV-----IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
+I +S G E A+ + +K E Y LI MC+ + L +M ++
Sbjct: 289 TIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEI 348
Query: 326 GCEPITLTYNYVLGVLCK-----------------------------------NGQDADA 350
G P +TYN ++ C G+ +A
Sbjct: 349 GLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEA 408
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
++++EM + PDAITY I I R G AF+ N+M+ +G++P T+ + I
Sbjct: 409 DDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYV 468
Query: 411 YFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
R ++A D+ S ++++ + H N N A +L EM + + P+
Sbjct: 469 LSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPD 528
Query: 471 VSVYRRVLK 479
+ +++
Sbjct: 529 EVTFNTLMQ 537
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 110/269 (40%), Gaps = 23/269 (8%)
Query: 216 QLLNDF--NVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALI 273
QL++DF +++ CL+ K++ VL++ K + ++L QV G+ + +
Sbjct: 110 QLVSDFIHHLHPHCLDTKSYCLAVVLLARLPSPKLAL----QLLKQVMGTRIATNR---- 161
Query: 274 EMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMC--RRCD--FKGPRDLLVEMRQVGCEP 329
E+F L L + +K + +++L++ C RR D FK M++ G P
Sbjct: 162 ELFDELTLSR-DRLSVKSS----IVFDLLVRVCCELRRADEAFK----CFYMMKEKGIVP 212
Query: 330 ITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFF 389
T N +L + K + A L EM T+ I + C+ GK A F
Sbjct: 213 KIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFI 272
Query: 390 NQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKN 449
M G +P + ++ I GY E A + + K + Y L S K
Sbjct: 273 GFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKE 332
Query: 450 NNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + +M++ GL PN Y ++
Sbjct: 333 GRLEEASGLFDKMVEIGLVPNAVTYNTLI 361
>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
Length = 987
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 83/183 (45%), Gaps = 7/183 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +LIK +C+ R LL EM G P TYN ++ CK+G+ DA + M
Sbjct: 287 YTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALME 346
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C+PD TY I C GK D A N + RG P + T I GY R +
Sbjct: 347 QNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERID 405
Query: 419 DAYKYVVLSADKYKSSSNM---LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
DA + + ++ S+ + Y +L ++ K AK L+EM NGL PNV Y
Sbjct: 406 DALR---VKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYT 462
Query: 476 RVL 478
++
Sbjct: 463 SII 465
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 126/307 (41%), Gaps = 54/307 (17%)
Query: 203 DNCGRLDDYETMRQ--LLNDFNVYQVCLN--------EKAFGFLPVLISSKALTKKGIWR 252
DN RL +E M Q L D Y V + E+A+ FL +KG+
Sbjct: 545 DNAFRL--FEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---------VRKGV-- 591
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNILIKEMC 307
VL +V + LV G FS G + A +I+K + + Y++L++ +C
Sbjct: 592 ---VLTKVTYTSLVDG-------FSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALC 641
Query: 308 RRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAI 367
++ +L +M G + + Y ++ + K G+ A L EM+ P A
Sbjct: 642 KQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSAT 701
Query: 368 TYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLS 427
TY +FI C++G+ + A + +M + G+ P + T+ FI G + A+ +
Sbjct: 702 TYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRM 761
Query: 428 ADKYKSSSNMLYSL---------LASLHDKNNNPV-------MAKNVLSEMMKNGLRPNV 471
D + Y L L + H + + + M +L MMK+GL P V
Sbjct: 762 VDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTV 821
Query: 472 SVYRRVL 478
Y ++
Sbjct: 822 VTYSSII 828
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 83/218 (38%), Gaps = 38/218 (17%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +LI + ++C K ++ L EM G P +TY ++ CK G A E+ + M
Sbjct: 426 YGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLME 485
Query: 359 GRNCHPDA-----------------------------------ITYEIFIVYSCRVGKFD 383
CHP+A ITY I C+ +FD
Sbjct: 486 HEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFD 545
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
AF F M + GL P + R E+AY ++V K + + Y+ L
Sbjct: 546 NAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLV---RKGVVLTKVTYTSLV 602
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K N A ++ +M+ G + ++ Y +L+ L
Sbjct: 603 DGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQAL 640
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
LL M + G P +TY+ ++ CK + +AC LL+ MLG++ P+ Y + I C
Sbjct: 808 LLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCC 867
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ F A +F M++ G QP+L ++ I G
Sbjct: 868 DIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVG 900
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 70/164 (42%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L+ +M GC+ TY+ +L LCK + +A +L++M + + Y I I
Sbjct: 617 LIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMI 676
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ GK D A + FN+M+ G +P T+ FI Y R E+A + + +
Sbjct: 677 KEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVV 736
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y++ + A + L M+ PN Y +LKH
Sbjct: 737 TYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHF 780
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 88/238 (36%), Gaps = 60/238 (25%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN +I C+ K + M Q GC P TYN ++ LC G+ +A ELL
Sbjct: 319 VWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLN 377
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF--------------------------- 388
+ R P IT+ I C+ + D A
Sbjct: 378 GAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKC 437
Query: 389 --------FNQMVKRGLQPRLATHAAFIKGY------------FIFYRYEDAYKYVVLSA 428
N+M GL P + T+ + I GY F +E + +A
Sbjct: 438 RLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHP----NA 493
Query: 429 DKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
Y S ++Y L + DK + MA ++++M ++G+ P V Y +++ H+
Sbjct: 494 WTYGS---LIYGL---IQDKKLHKAMA--LITKMQEDGITPGVITYTTLIQGQCKKHE 543
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 85/234 (36%), Gaps = 51/234 (21%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y I+I EM + + L EM G +P TY + CK G+ +A L+ EM
Sbjct: 668 YTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEME 727
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV------------------------- 393
PD +TY IFI +G D AF+ +MV
Sbjct: 728 RDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLIN 787
Query: 394 --------------------------KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLS 427
K GL P + T+++ I G+ R E+A +
Sbjct: 788 AHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHM 847
Query: 428 ADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K S + +Y++L A + +++M++ G +P + Y ++ L
Sbjct: 848 LGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGL 901
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 85/237 (35%), Gaps = 8/237 (3%)
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVS--------YYNILIK 304
++ + +VGG LV + L ++M +Y+ K V YN +I
Sbjct: 128 AIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIM 187
Query: 305 EMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHP 364
C++ +R+ G + T T N +L C+ AC LL M C
Sbjct: 188 AYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRR 247
Query: 365 DAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV 424
+ +Y I I C A MV G L T+ IKG R DA +
Sbjct: 248 NEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLL 307
Query: 425 VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ S Y+ + + K+ A + + M +NG P+ Y ++ L
Sbjct: 308 DEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGL 364
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 118/246 (47%), Gaps = 14/246 (5%)
Query: 254 VEVLNQVGGSCLVSGVRALIEMFSVL-----------GLYEMAKYVIKKT-ERKVSYYNI 301
VE+ ++V G + G + MF+++ Y++ + +I+K V + I
Sbjct: 165 VELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTI 224
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
LI +C+ + LL +M GC P +TY+ V+ LCK GQ DA EL + M RN
Sbjct: 225 LITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRN 284
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
C P+ +T+ I I C+ + + A +++M + G P + T+ + I G ++ ++A+
Sbjct: 285 CPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAF 344
Query: 422 KYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR-VLK 479
+ + S++N + YS L + A + S ++ G P+++ Y +L+
Sbjct: 345 QLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILE 404
Query: 480 HLHTSH 485
+ TS
Sbjct: 405 YCKTSR 410
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 83/181 (45%), Gaps = 2/181 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ILI+ D LL EM+ G E + + ++ LC G+ +A E M
Sbjct: 12 YGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM- 70
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
++C PD +TY + C+ GKFD A +M+ RG P T + I G F E
Sbjct: 71 AKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEE 130
Query: 419 DAYKYVVLSADKYKSSSNMLY-SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
A++ + + +S+ + +++ L +K N+ +A VL ++ G P V ++ V
Sbjct: 131 QAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLV 190
Query: 478 L 478
+
Sbjct: 191 I 191
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 95/219 (43%), Gaps = 1/219 (0%)
Query: 269 VRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCE 328
++ L + V+ E + + K V Y L+ +C+ F + +L EM GC
Sbjct: 51 MKGLCDAGRVVEALEHFRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCA 110
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC-RVGKFDVAFN 387
P T+T++ ++ LCK G + A +LE+++ R +E I C + ++A
Sbjct: 111 PDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASK 170
Query: 388 FFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHD 447
++ +G P + I G+ + AYK + + +K + +++L +
Sbjct: 171 VLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLC 230
Query: 448 KNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
K N A+ +L +M+ G PNV Y V+ L Q
Sbjct: 231 KANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQ 269
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 65/143 (45%), Gaps = 5/143 (3%)
Query: 267 SGVRALIEMFSVLGLYEMAKYVIKK-TER----KVSYYNILIKEMCRRCDFKGPRDLLVE 321
S V AL+E +G + AK ++ K +ER VS YN L+ + R + +
Sbjct: 504 SAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEA 563
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M G P T N V+ LC + DA EL++ M C PD T I C+ G+
Sbjct: 564 MVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGR 623
Query: 382 FDVAFNFFNQMVKRGLQPRLATH 404
D+A +M + GL+P TH
Sbjct: 624 ADLARKLLEEMTEAGLEPNDTTH 646
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 77/195 (39%), Gaps = 42/195 (21%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKN----------- 344
V +NILI +C+ + R L MR+ GC P +TYN ++ LCK+
Sbjct: 289 VVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQ 348
Query: 345 -------------------------GQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
G+ ADAC + ++ + PD TY I+ C+
Sbjct: 349 TIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKT 408
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
+ +M +G PR+ T +A + G F E A + A + + ++Y
Sbjct: 409 SRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIY 468
Query: 440 SLL------ASLHDK 448
+L+ AS H+K
Sbjct: 469 NLVVEGMARASKHNK 483
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 101/261 (38%), Gaps = 13/261 (4%)
Query: 254 VEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFK 313
V N V S L G AL M ++ M V K ++ Y LI E C+
Sbjct: 355 VSAANAVTYSTLFHGYAALGRMADACRIFSM--LVDKGFSPDLATYTSLILEYCKTSRAV 412
Query: 314 GPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFI 373
+L+ EM G P T + VLG L + A +L + M R C DA+ Y + +
Sbjct: 413 EVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVV 472
Query: 374 VYSCRVGKFDVAFNFFNQMV---KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADK 430
R K + A Q++ R P + A ++ R +DA + + +++
Sbjct: 473 EGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSER 532
Query: 431 ----YKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
SS N L S L+ L + A V M+ G P +S V+ L ++ +
Sbjct: 533 GFAAAVSSYNGLLSGLSRLQRWDE----ATQVFEAMVSAGPAPEISTVNVVISWLCSAAK 588
Query: 487 EHMAKCLSSRYSSLSLGSSVE 507
A L R S L +E
Sbjct: 589 VDDAYELVQRMSKLGCCPDIE 609
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 82/217 (37%), Gaps = 48/217 (22%)
Query: 271 ALIEMFSVLGLYEMAKY---------VIKKTERKV----SYYNILIKEMCRRCDFKGPRD 317
ALI V G+ +K+ VI K +RK S + L++ +C+ +
Sbjct: 465 ALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQ 524
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
LL +M + G +YN +L L + + +A ++ E M+ P+ T + I + C
Sbjct: 525 LLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLC 584
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
K D A+ +M K G P + T I GY
Sbjct: 585 SAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYC------------------------- 619
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
K+ +A+ +L EM + GL PN + +
Sbjct: 620 ----------KSGRADLARKLLEEMTEAGLEPNDTTH 646
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 5/121 (4%)
Query: 257 LNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNILIKEMCRRCD 311
+++ G + VS L+ S L ++ A V + ++S N++I +C
Sbjct: 529 MSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAK 588
Query: 312 FKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEI 371
+L+ M ++GC P T N ++G CK+G+ A +LLEEM P+ T+++
Sbjct: 589 VDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDL 648
Query: 372 F 372
Sbjct: 649 L 649
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 50/133 (37%), Gaps = 1/133 (0%)
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
+ R C P+ TY I I G D+A +M G + H +KG R
Sbjct: 1 MARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRV 60
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+A ++ A K + M Y+ L K A+ +L EM+ G P+ + +
Sbjct: 61 VEALEHFRAMA-KDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTL 119
Query: 478 LKHLHTSHQEHMA 490
+ L E A
Sbjct: 120 IDGLCKFGSEEQA 132
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 91/186 (48%), Gaps = 3/186 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN +I +C ++L + + C P +T+N +L CK G A E+LE
Sbjct: 239 VITYNSIIHALCVAGKVVEAAEIL---KTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLE 295
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM N PD ITY I + CRVG+ VAF ++V++G P + + + + G
Sbjct: 296 EMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSG 355
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E+A+K V + + + ++YS L S + + N A+ +L+EM+ + P + Y
Sbjct: 356 EIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYN 415
Query: 476 RVLKHL 481
VL L
Sbjct: 416 IVLGGL 421
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 96/206 (46%), Gaps = 2/206 (0%)
Query: 289 IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
++ V Y+ L+ CR + R++L EM + P TYN VLG L K+G +
Sbjct: 369 VRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSIS 428
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
A L+ +++ R PD +TY I C+ + A + ++M RG P T + +
Sbjct: 429 KAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVV 488
Query: 409 KGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLR 468
G R +DA+ VV + K + + ++Y+ L K++ A VL M G+
Sbjct: 489 FGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVA 548
Query: 469 PNVSVYRRVLKHLHTSHQEHMAKCLS 494
+ YR+++ + SH +A+ ++
Sbjct: 549 LDDFAYRKLI--VSMSHGGRVAEAMA 572
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%)
Query: 306 MCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPD 365
+CR L+VEM + P + Y ++ LCK+ + DAC +L+ M G+ D
Sbjct: 491 LCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALD 550
Query: 366 AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
Y IV G+ A +++MV RG P +T
Sbjct: 551 DFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGST 588
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 71/156 (45%), Gaps = 2/156 (1%)
Query: 333 TYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
+YN++L +L K+G ++ +++L C P+ +T++I I +C+ G+ A F +
Sbjct: 29 SYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFLRAL 88
Query: 393 VKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNP 452
+ + P + I G F + A K + Y+ + S K+ N
Sbjct: 89 DEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNL 148
Query: 453 VMAKNVLSEMMKNGLR--PNVSVYRRVLKHLHTSHQ 486
A+ +L EM++ G + P++ Y ++ + + +
Sbjct: 149 EKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASR 184
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 69/125 (55%), Gaps = 6/125 (4%)
Query: 299 YNILIKEMCRRCDFKGPRD---LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
YNILI C++ + P+D LL EM + GCEP +TYN ++ L K+G+ DA L +
Sbjct: 309 YNILIDGYCKQ---ERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQ 365
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
ML R+C P T+ + I C+VG+ D+A+ F M RG P + T+ I G
Sbjct: 366 MMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRAN 425
Query: 416 RYEDA 420
R +DA
Sbjct: 426 RIDDA 430
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 93/207 (44%), Gaps = 5/207 (2%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L EM KY E YN L+ + + + +L M + C+P T+N ++ +
Sbjct: 329 LQEMVKY---GCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDM 385
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
CK GQ A EL + M R C PD TY I I +CR + D A +M + G P
Sbjct: 386 FCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPD 445
Query: 401 LATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
+ T+ + + G + ++AY+ Y VL Y +L+ L K+ A+ +L
Sbjct: 446 VVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLC-KSRRLDDAEKLL 504
Query: 460 SEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
EM +NG P+V Y ++ + Q
Sbjct: 505 REMERNGSAPDVVAYTILIHGFCKADQ 531
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 80/188 (42%), Gaps = 1/188 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ LI C+ DF+ LL EM + G P YN ++ LC NG+ D+ + +
Sbjct: 170 YSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGR-VDSALVHYRDM 228
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
RNC P ITY I + C+ + A M++ G P + T+ I G+ +
Sbjct: 229 QRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMD 288
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + S Y++L + K P +L EM+K G PN Y ++
Sbjct: 289 EAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLM 348
Query: 479 KHLHTSHQ 486
L S +
Sbjct: 349 DSLVKSGK 356
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 85/177 (48%), Gaps = 7/177 (3%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMR--QVGCEPITLTYNYVLGVLCKNGQDADACELL 354
+ YN +IK +C D LV R Q C P +TY ++ LCK+ + +DA +L
Sbjct: 203 AVYNTIIKGLC---DNGRVDSALVHYRDMQRNCAPSVITYTILVDALCKSARISDASLIL 259
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
E+M+ C P+ +TY I C++G D A FNQM++ P + T+ I GY
Sbjct: 260 EDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQ 319
Query: 415 YRYEDAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
R +D K ++ KY N + Y+ L K+ + A N+ M++ +P+
Sbjct: 320 ERPQDGAK-LLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPS 375
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 110/270 (40%), Gaps = 23/270 (8%)
Query: 251 WRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKE 305
+ V EVL G V LI+ + A+ ++++ ER V Y ILI
Sbjct: 466 YEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHG 525
Query: 306 MCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPD 365
C+ EM GC P +TY+ V+ LCK+ + D C LL+ ML R PD
Sbjct: 526 FCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPD 585
Query: 366 AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV- 424
AI Y I C+ +D A+ + M + G P + T+ + R ++A +
Sbjct: 586 AIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLE 645
Query: 425 VLSAD-------KYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
V+ +D Y S + + ++ HDK A + M G P +Y +
Sbjct: 646 VMESDGCLPDTVTYNSVFDGFWK--SAEHDK------AFRLFQAMKSRGCSPTPFMYSLL 697
Query: 478 LKHLHTSHQEHMAKCLSSRYSSLSLGSSVE 507
L L +E M + + +L G+ V+
Sbjct: 698 LTKLVA--EEKMDQAMEIWEEALEAGADVD 725
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 84/191 (43%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI C+ + L +M + C P TYN ++ CK + D +LL+
Sbjct: 271 VVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQ 330
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM+ C P+ ITY + + GK+ AFN M++R +P T I +
Sbjct: 331 EMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVG 390
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ + AY+ L D+ Y+++ S + N A+ +L M + G P+V Y
Sbjct: 391 QLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYN 450
Query: 476 RVLKHLHTSHQ 486
++ L + Q
Sbjct: 451 SIVSGLCKASQ 461
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 76/179 (42%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y IL+ +C+ +L +M + GC P +TYN ++ CK G +A L
Sbjct: 236 VITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFN 295
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML +C PD TY I I C+ + +MVK G +P T+ +
Sbjct: 296 QMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSG 355
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+Y DA+ + + S+ ++L+ + K +A + M G P++ Y
Sbjct: 356 KYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTY 414
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 5/215 (2%)
Query: 272 LIEMFSVLGLYEMAKYVIK-KTER----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
+I+MF +G ++A + + T+R + YNI+I CR R LL M + G
Sbjct: 382 MIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAG 441
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
C P +TYN ++ LCK Q +A E+ E + D +T I C+ + D A
Sbjct: 442 CPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAE 501
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
+M + G P + + I G+ + + + + DK + + YS++
Sbjct: 502 KLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKL 561
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K+ +L M++ G+ P+ VY V+ L
Sbjct: 562 CKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGL 596
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 1/155 (0%)
Query: 324 QVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
Q G + T N +L + + +A +L + C PD+ITY I C+ F
Sbjct: 125 QPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQ 184
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
A+ ++M KRG+ P A + IKG R + A + + + S + Y++L
Sbjct: 185 QAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVH-YRDMQRNCAPSVITYTILV 243
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
K+ A +L +M++ G PNV Y ++
Sbjct: 244 DALCKSARISDASLILEDMIEAGCAPNVVTYNTLI 278
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +I +C+ ++L +EM+ G P + Y+ ++ +C G+ A L EM+
Sbjct: 241 YCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMV 300
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
HP+ +T+ + I C+ GK + A + M++RG P T+ I G+ + R +
Sbjct: 301 DEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRID 360
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA V K + + Y++L + + K+ V AK + EMM + P V Y +L
Sbjct: 361 DARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLL 420
Query: 479 KHL 481
L
Sbjct: 421 TGL 423
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 3/212 (1%)
Query: 284 MAKYVIKKTERKVSY-YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLC 342
+ K +I++ E ++ YN LI C RDL V M G E ++YN ++ C
Sbjct: 330 LLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYC 389
Query: 343 KNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLA 402
K+G+ +A +L EM+ + P ITY + R GK A+N F +M L P
Sbjct: 390 KSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESC 449
Query: 403 THAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
T+ + G +A + + L ++ S + L+ L K +A+ + +
Sbjct: 450 TYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLC-KARKIEIARELFNR 508
Query: 462 MMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
+ GL PNV Y ++ L S Q AK L
Sbjct: 509 LSHEGLEPNVITYTVMIHGLCKSGQLENAKDL 540
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 102/232 (43%), Gaps = 5/232 (2%)
Query: 280 GLYEMAK-----YVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
G +E AK V + V +N+LI +C+ + LL M Q G P T TY
Sbjct: 287 GRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTY 346
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N ++ C G+ DA +L M + DA++Y + I C+ G+ A + +M+
Sbjct: 347 NTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMC 406
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM 454
+ + P + T+ + G F + DA+ + + Y++L KNN+
Sbjct: 407 KEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSE 466
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
A + + + +P++ ++ ++ L + + +A+ L +R S L +V
Sbjct: 467 AMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNV 518
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 2/187 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN L+ + R + +L EM+ P + TYN +L LCKN ++A EL
Sbjct: 413 VITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFH 472
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ + P + I C+ K ++A FN++ GL+P + T+ I G
Sbjct: 473 YLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSG 532
Query: 416 RYEDAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ E+A K + L ++ + N++ ++ L +N+ +L EM + P+ S
Sbjct: 533 QLENA-KDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTI 591
Query: 475 RRVLKHL 481
V+ L
Sbjct: 592 SIVVDLL 598
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V Y ++I +C+ + +DL + M + GC P +T+N ++ C+N + E
Sbjct: 515 EPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVE 574
Query: 353 LLEEMLGRNCHPDAITYEIFI 373
LL+EM ++ PDA T I +
Sbjct: 575 LLQEMAEKDFSPDASTISIVV 595
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 13/171 (7%)
Query: 319 LVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCR 378
L++M+ P ++N +LG + K + D L + M PD IT I I C
Sbjct: 83 LIDMQPT---PPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCN 139
Query: 379 VGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV-VLSADKYKSSSNM 437
+ K D +M++RG P T + +KG + R +A + + Y+ +
Sbjct: 140 LNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVT 199
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNG-------LRPNVSVYRRVLKHL 481
+LL L N + K L E M NG ++PN+ Y ++ L
Sbjct: 200 YGTLLNGLCMTGNTMLAVK--LHEEMLNGNGGFGVTIKPNLVCYCTIIDSL 248
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 100/265 (37%), Gaps = 24/265 (9%)
Query: 265 LVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCR--RCDFKGPRDLLVEM 322
L+ V + F V+ LY+ + NILI C + DF +L EM
Sbjct: 98 LLGAVAKIKRYFDVISLYKRMSLI--GLAPDFITLNILINCYCNLNKVDFG--LAVLGEM 153
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
+ G P T+T+ ++ LC + ++A LL +M+ P+ +TY + C G
Sbjct: 154 LRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNT 213
Query: 383 DVAFNFFNQMVKRG------LQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
+A +M+ ++P L + I + + + + S
Sbjct: 214 MLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDV 273
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL----HTSHQEHMAKC 492
+ YS + AK + +EM+ G+ PNV + ++ L H+ K
Sbjct: 274 VAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKL 333
Query: 493 LSSR--------YSSLSLGSSVEAR 509
+ R Y++L G +E R
Sbjct: 334 MIQRGESPDTFTYNTLIDGFCLEGR 358
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 48/115 (41%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+S +N L+ + + + L M +G P +T N ++ C + +L
Sbjct: 92 ISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLG 151
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
EML R P+ +T+ + C + A +MV+ G +P + T+ + G
Sbjct: 152 EMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNG 206
>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 646
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%)
Query: 289 IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
+K V Y+ L+ +C+ LL EM+ GC P +T+N ++ L KNG +
Sbjct: 202 LKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLS 261
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
A +L++ M + C P+ +TY I C GK D A + +MV P T+ I
Sbjct: 262 RAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTII 321
Query: 409 KGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLR 468
G R ED ++ ++ + ++ +YS L S K A + EM + G +
Sbjct: 322 NGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCK 381
Query: 469 PNVSVY 474
PNV VY
Sbjct: 382 PNVVVY 387
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 83/181 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N+LI + + D L+ M GC P +TYN ++ LC G+ A LLE+M+
Sbjct: 247 FNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMV 306
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C P+ +TY I + + + + M +RG + +++ I G F + E
Sbjct: 307 SSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSE 366
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + A+K + ++Y ++ P A+++L EM+ G PN Y ++
Sbjct: 367 NAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLM 426
Query: 479 K 479
K
Sbjct: 427 K 427
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 108/231 (46%), Gaps = 12/231 (5%)
Query: 256 VLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGP 315
V N+V + L+ G+ ++ L L E K V K Y +I + ++ +
Sbjct: 276 VPNEVTYNTLIHGLCLKGKLDKALSLLE--KMVSSKCVPNQVTYGTIINGLVKQRRAEDG 333
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
+L+ M + G + Y+ ++ L K G+ +A L +EM + C P+ + Y FI
Sbjct: 334 VHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDG 393
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
CR K D A + +M+ +G P T+++ +KG F++ D+ K +++ K S
Sbjct: 394 LCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKG---FFKKGDSQKAILVW--KEMMSQ 448
Query: 436 NMLY-----SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+M + S+L + ++ A V + M+ GL+P+V Y ++K L
Sbjct: 449 DMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGL 499
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 39/85 (45%)
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G +P LTYN ++ LCK GQ A + EM +NC+PD TY + C+ + D A
Sbjct: 169 GFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEA 228
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKG 410
++M G P T I
Sbjct: 229 VFLLDEMQAEGCLPNPVTFNVLIDA 253
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 60/147 (40%), Gaps = 27/147 (18%)
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDF 312
VV + + G C V V +++F YEM + K+ V YNIL +CR+ +
Sbjct: 489 VVAYSSMIKGLCDVGSVDKGLKLF-----YEM-QCQEPKSRPDVVTYNILFNALCRQDNL 542
Query: 313 KGPRDLLVEMRQVGCEPITLTYNYVLGV---------------------LCKNGQDADAC 351
DLL M GC+P +LT N L L K + A
Sbjct: 543 TRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVRLLKRERKLSAL 602
Query: 352 ELLEEMLGRNCHPDAITYEIFIVYSCR 378
++EEML R P+ T+ I +C+
Sbjct: 603 RIVEEMLLRFLPPEPSTWSRVIQRTCK 629
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 67/183 (36%), Gaps = 16/183 (8%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
++L+ +C + + M G +P + Y+ ++ LC G +L EM
Sbjct: 458 SVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQC 517
Query: 360 RN--CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
+ PD +TY I CR A + N M+ G P T F+
Sbjct: 518 QEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFL--------- 568
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
E + + D ++ LL K + A ++ EM+ L P S + RV
Sbjct: 569 ETLRERINPPQDGRLFLDELVVRLL-----KRERKLSALRIVEEMLLRFLPPEPSTWSRV 623
Query: 478 LKH 480
++
Sbjct: 624 IQR 626
>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
Length = 715
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 85/199 (42%), Gaps = 16/199 (8%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK--------------- 343
YN++I + + + L EM G P +TYN V+ LCK
Sbjct: 142 YNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMF 201
Query: 344 -NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLA 402
GQ +A LL++M G PD +TY + I Y C++G+ A N F+ MV+RG P
Sbjct: 202 DKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAY 261
Query: 403 THAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM 462
T+ + GY D + + L + ++++L + KN A EM
Sbjct: 262 TYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEM 321
Query: 463 MKNGLRPNVSVYRRVLKHL 481
+ G PNV Y V+ L
Sbjct: 322 RQKGFSPNVVTYTTVIDIL 340
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 108/261 (41%), Gaps = 45/261 (17%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPI 330
AL++M +L L M + I + +NILI+ + +EMRQ G P
Sbjct: 275 ALVDMHDLLAL--MIQDGIPLEDH---VFNILIRAYAKNETLDKAMTAFIEMRQKGFSPN 329
Query: 331 TLTYNYVLGVLCKNGQDADA--------------------------CELLE--------- 355
+TY V+ +LCK G+ DA C + E
Sbjct: 330 VVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSF 389
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM+ R HP+AI + C+ G+ A +FF+Q++ G++P + ++ I GY +
Sbjct: 390 EMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDG 449
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ +++ K + N+ YS L + + KN A + EM ++PN Y
Sbjct: 450 KMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYN 509
Query: 476 RVLKHLHTSHQEHMAKCLSSR 496
+L L H + +++R
Sbjct: 510 IILHGLF-----HAGRVVAAR 525
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 82/183 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ LI +C ++K L EM G P + N ++ LCK G+ +A + ++++
Sbjct: 368 FTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQII 427
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD ++Y I I C GK D + +MV GL+P T++A + GY R +
Sbjct: 428 HVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVD 487
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA K + + Y+++ V A+ +++ +G++ ++ Y VL
Sbjct: 488 DALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVL 547
Query: 479 KHL 481
L
Sbjct: 548 GGL 550
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 2/180 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y ILI C LL M +G P +TY+ +L CKNG+ DA L
Sbjct: 435 VVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYR 494
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM ++ P+AITY I + G+ A F+ ++V G+Q + T+ + G
Sbjct: 495 EMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENS 554
Query: 416 RYEDAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
++A + + L + +++ ++ L K AK++ S ++ +GL P+ +Y
Sbjct: 555 FVDEALRMFQGLRSKEFQLEVRTFNIMIVGLL-KVGRIGDAKSLFSAILPSGLVPDAIIY 613
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 52/114 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNI++ + R+ +++ G + TYN VLG LC+N +A + + +
Sbjct: 508 YNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLR 567
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+ + T+ I IV +VG+ A + F+ ++ GL P + I+ +
Sbjct: 568 SKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHI 621
>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
lyrata]
gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
lyrata]
Length = 1147
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 94/191 (49%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
++ YN+ I +C+ + + + ++ +VG P +TY V+ + G+ A +L +
Sbjct: 551 LTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYD 610
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EML + P ITY + I + G+ + AF + +M KRG++P + TH A + G
Sbjct: 611 EMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAG 670
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
++AY+Y+ ++ S + Y++L S H + + EM+ + P+ +R
Sbjct: 671 NIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGYTHR 730
Query: 476 RVLKHLHTSHQ 486
+ KHL H+
Sbjct: 731 ALFKHLEKDHE 741
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 81/216 (37%), Gaps = 36/216 (16%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C + +G + L EM P +TY +L KNG + A E+ +EML
Sbjct: 448 YNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEML 507
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV------------------------- 393
+ PD Y V R+G + AF +MV
Sbjct: 508 RKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNL 567
Query: 394 -----------KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
+ GL P T+ I+GY R++ A K S S + Y +L
Sbjct: 568 EKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVL 627
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
H K A +EM K G+RPNV + +L
Sbjct: 628 IHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALL 663
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 89/209 (42%), Gaps = 1/209 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ + F L +++ P +TYN ++ LC++G A L EEM
Sbjct: 413 YNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMT 472
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ +PD ITY + + G +A +++M+++G++P + G E
Sbjct: 473 SQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSE 532
Query: 419 DAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
A++ + + A+ + + +Y++ K N A ++ + GL P+ Y V
Sbjct: 533 KAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTV 592
Query: 478 LKHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
++ + MA+ L S L SV
Sbjct: 593 IRGYLEKGRFKMARDLYDEMLSKRLSPSV 621
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 98/263 (37%), Gaps = 38/263 (14%)
Query: 243 KALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNIL 302
+ + GI V N + SC +G ++ + EM + I+ +E YNIL
Sbjct: 263 ETMVMHGIMPTVITFNTMLDSCFKAGDLERVDKIWL----EMKRRNIEFSE---VTYNIL 315
Query: 303 IKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNC 362
I + + R +M++ G ++N ++ CK G +A + +EML
Sbjct: 316 INGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGI 375
Query: 363 HPDAITYEIFIVYSCRVGKFD--------------VAFN-----------------FFNQ 391
+P TY I+I C G+ D V++N F+
Sbjct: 376 YPTTSTYNIYIRALCEFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMRKFVEASLLFDD 435
Query: 392 MVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNN 451
+ + P + T+ I G E A + + + Y+ L KN N
Sbjct: 436 LKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGN 495
Query: 452 PVMAKNVLSEMMKNGLRPNVSVY 474
MA + EM++ G++P+ Y
Sbjct: 496 LSMATEIYDEMLRKGIKPDGYAY 518
>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
Length = 933
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 96/219 (43%), Gaps = 5/219 (2%)
Query: 280 GLYEMAKYVIKK-TERKVSYYNILIKEMCRRCDFKGPRDLLVE----MRQVGCEPITLTY 334
G E AKY++ + S ++ + + + C D++++ M G Y
Sbjct: 638 GAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVY 697
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N +L VLC +G A +LEEMLG PD IT+ I+ C+ D AF + QM+
Sbjct: 698 NTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLH 757
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM 454
+ + P +AT + G R +A ++ +N+ Y +L + H K +N V
Sbjct: 758 QNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVE 817
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
A + EM+ G P VS Y ++ + AK L
Sbjct: 818 AMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKEL 856
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 90/196 (45%), Gaps = 11/196 (5%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+ I +C FK + +L EMR +G +P TYN ++ C+ G+ A A +LL EM
Sbjct: 557 YNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMK 616
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+ ITY + G + A N+MV G P TH ++ R +
Sbjct: 617 MSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLD 676
Query: 419 DAYKYVVLSADKYKSSSNM-----LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
V+L ++ ++ + +Y+ L + + A VL EM+ +G+ P+
Sbjct: 677 -----VILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTIT 731
Query: 474 YRR-VLKHLHTSHQEH 488
+ +L H +SH ++
Sbjct: 732 FNALILGHCKSSHLDN 747
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 4/185 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N LI CR D + M G + YN ++ C+ GQ A +L+ M
Sbjct: 172 WNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMK 231
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ TY FIVY CR + AF+ + MV+ G+ + T +A + G R+
Sbjct: 232 EAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFS 291
Query: 419 DAYKYVVLSADKYKSSSNMLY--SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
+AY + DK + N + +L+ SL + ++L EM+ G+ ++ Y
Sbjct: 292 EAYA-LFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELL-SLLGEMVSRGVVMDLVTYTA 349
Query: 477 VLKHL 481
++ L
Sbjct: 350 LMDWL 354
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 78/186 (41%), Gaps = 6/186 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI + + D E+ P + YN + LC G+ +A +L EM
Sbjct: 522 YTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMR 581
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD TY IV CR G+ A ++M ++P L T+ + G F E
Sbjct: 582 NMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVE 641
Query: 419 DAYKYVV---LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
A KY++ +SA SS L A + + ++ ++ MM GL +++VY
Sbjct: 642 KA-KYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVIL--DIHEWMMNAGLHADITVYN 698
Query: 476 RVLKHL 481
+L+ L
Sbjct: 699 TLLQVL 704
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 97/222 (43%), Gaps = 2/222 (0%)
Query: 257 LNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPR 316
++ VG + LV+G ++ + G+ +M K + V+ Y I CR +
Sbjct: 202 MDVVGYNTLVAGFCRAGQVDAARGVLDMMKEA--GVDPNVATYTPFIVYYCRTKGVEEAF 259
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
DL M + G +T + ++ LC++G+ ++A L EM P+ +TY I
Sbjct: 260 DLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSL 319
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
+ G+ + +MV RG+ L T+ A + + ++ + + S +
Sbjct: 320 AKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNG 379
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ Y++L K +N A+ VL EM + + PNV + V+
Sbjct: 380 VTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVI 421
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 4/150 (2%)
Query: 332 LTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQ 391
+ Y ++ L K G A + +E++ RN PDA+ Y +FI C +GKF A + +
Sbjct: 520 VNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTE 579
Query: 392 MVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKS-SSNML-YSLLASLHDKN 449
M GL+P +T+ I + + E A +L K S N++ Y+ L +
Sbjct: 580 MRNMGLKPDQSTYNTMIVSH--CRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGT 637
Query: 450 NNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
AK +L+EM+ G P+ +RRVL+
Sbjct: 638 GAVEKAKYLLNEMVSAGFSPSSLTHRRVLQ 667
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
+L+EM + G EP LTY+ ++ K +A L EM+G+ P TY I
Sbjct: 786 VLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFT 845
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
+ G A F M KRG+ P T+ + G+
Sbjct: 846 KAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGW 879
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 68/172 (39%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N LI C+ +M P T+N +LG L G+ +A +L EM
Sbjct: 732 FNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEME 791
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ +TY+I + + A + +MV +G P+++T+ A I +
Sbjct: 792 KSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMT 851
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
A + + ++ Y +L S + N K L +M + G P+
Sbjct: 852 QAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPS 903
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 89/213 (41%), Gaps = 9/213 (4%)
Query: 278 VLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITL 332
+LG ++ AK ++ + S YN +I CR+ + LL EM+ +P +
Sbjct: 566 ILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLI 625
Query: 333 TYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
TYN ++ L G A LL EM+ P ++T+ + + + DV + M
Sbjct: 626 TYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWM 685
Query: 393 VKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSA--DKYKSSSNMLYSLLASLHDKNN 450
+ GL + + ++ + Y VVL + + ++ L H K++
Sbjct: 686 MNAGLHADITVYNTLLQ--VLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSS 743
Query: 451 NPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHT 483
+ A ++M+ + PN++ + +L L +
Sbjct: 744 HLDNAFATYAQMLHQNISPNIATFNTLLGGLES 776
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 4/113 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNIL+ + D +L EM + G +T N +L LC+NGQ DA L +
Sbjct: 106 YNILLAALS---DHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQ-VDAAAALADRG 161
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
G D I + I CRVG A + ++M +GL + + + G+
Sbjct: 162 GGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGF 214
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%)
Query: 332 LTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQ 391
+TY ++ LCK +A ++L EM ++ P+ +T+ I + G D A +
Sbjct: 380 VTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRM 439
Query: 392 MVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
M +RG+ P + T+ I G+F F + A +
Sbjct: 440 MKERGINPNVVTYGTLIDGFFKFQGQDAALE 470
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 74/179 (41%), Gaps = 16/179 (8%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
L+ +CR F L EM +VG P +TY ++ L K G+ + LL EM+ R
Sbjct: 280 LVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRG 339
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
D +TY + + + GK D + + L T+ I + ++A
Sbjct: 340 VVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEA- 398
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKH 480
+ V+L ++ S N+ V +V++ +K GL + Y+R++K
Sbjct: 399 EQVLLEMEEKSISPNV---------------VTFSSVINGFVKRGLLDKATEYKRMMKE 442
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 78/182 (42%), Gaps = 35/182 (19%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
VS YN LI +CR+ D + ++LL EM G + +TYN ++ LCKN + +A +LL
Sbjct: 413 VSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLN 472
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM P+ +TY + C GK A N +M K QP + T+ IKGY
Sbjct: 473 EMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKIN 532
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ E A +L+EM++ GL PN + Y
Sbjct: 533 KLE-----------------------------------AANGLLNEMLEKGLNPNRTTYD 557
Query: 476 RV 477
V
Sbjct: 558 IV 559
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N LI C+ + + EM++ G +P +TYN ++ LC NG+ +A +L ++M+
Sbjct: 276 FNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMV 335
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
G P+ +TY I C+ A F+ + K+ L P + T I Y E
Sbjct: 336 GLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMME 395
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ + D+ + Y+ L + + + AK +L+EM GL+ +V Y ++
Sbjct: 396 EGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILI 455
Query: 479 KHLHTSHQEHMAKCLSSRYSSLSL 502
L + + A+ L + +L L
Sbjct: 456 DGLCKNDKSRNAEKLLNEMFNLGL 479
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 97/219 (44%), Gaps = 8/219 (3%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+ G C V A + F EM K +K + YN LI +C + DL
Sbjct: 280 IDGFCKDENVAAAKKAFE-----EMQKQGLKPN---IVTYNSLINGLCNNGKLEEAIDLW 331
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
+M +G +P +TYN ++ CK +A ++ +++ + P+ IT+ I C+
Sbjct: 332 DKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKE 391
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
G + F+ + M+ G+ P ++T+ I G + A + + +K + Y
Sbjct: 392 GMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTY 451
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
++L KN+ A+ +L+EM GL+PN Y ++
Sbjct: 452 NILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLM 490
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 93/215 (43%), Gaps = 5/215 (2%)
Query: 296 VSYYNILIKEMCRRC---DFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
V YN L+ C+R + EM P +T+N ++ CK+ A A +
Sbjct: 235 VVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKK 294
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
EEM + P+ +TY I C GK + A + +++MV GL+P + T+ A I G+
Sbjct: 295 AFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFC 354
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
++A K V K + N++ ++ + + K ++ S M+ G+ PNV
Sbjct: 355 KKKMMKEATK-VFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNV 413
Query: 472 SVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
S Y ++ L AK L + + L V
Sbjct: 414 STYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDV 448
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 79/198 (39%), Gaps = 10/198 (5%)
Query: 312 FKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEI 371
F +D ++ C P+ L L K + D + +EM+ R H + T+ I
Sbjct: 153 FTRAKDYGFKLSLTSCNPL-------LSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNI 205
Query: 372 FIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKY 431
FI CR GK + A + M G+ P + T+ + GY YK +
Sbjct: 206 FINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEML 265
Query: 432 KSS---SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEH 488
+ + + ++ L K+ N AK EM K GL+PN+ Y ++ L + +
Sbjct: 266 ANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLE 325
Query: 489 MAKCLSSRYSSLSLGSSV 506
A L + L L ++
Sbjct: 326 EAIDLWDKMVGLGLKPNI 343
>gi|357515141|ref|XP_003627859.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355521881|gb|AET02335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 731
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 136/319 (42%), Gaps = 4/319 (1%)
Query: 166 ILRVLNSEKVSALCFLKYMREIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQ 225
++ L + ++++ + Y R + N + + +I C + D E +LN+ V
Sbjct: 171 LMNSLLKDGITSMVWKVYKRMVQDGVVPNIYVYNCLIHACSKSRDVERAEFILNEMEVKG 230
Query: 226 VCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMA 285
V + + L L K L + + V + + + G + + +LI F G A
Sbjct: 231 VVPDIFTYNTLIALYCKKGLHYEAL-SVQDKMEREGINLDIVSYNSLIYGFCKEGKMREA 289
Query: 286 KYVIKKTERKVS---YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLC 342
+ + + + Y LI C+ +F+ L M G P +TYN +L LC
Sbjct: 290 MRMFGEIKDAIPNHVTYTTLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLC 349
Query: 343 KNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLA 402
+G+ DA +LL EM R D++T I C++G + A F +M++ GL P
Sbjct: 350 SDGRIRDANKLLHEMSERKVQADSVTCNTLINAYCKIGDLNSALKFKTKMLEAGLTPNSF 409
Query: 403 THAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM 462
T+ A I G+ E A + + D S + YS + + K +N + E
Sbjct: 410 TYKALIHGFCKTSELESAKELLFGMLDAGFSPNYRTYSWIVDSYCKKDNTDAVLALPDEF 469
Query: 463 MKNGLRPNVSVYRRVLKHL 481
+ G N+S+YR +++ L
Sbjct: 470 LSKGFCLNISLYRALIRRL 488
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 83/195 (42%), Gaps = 3/195 (1%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L+EM++ +K + N LI C+ D +M + G P + TY ++
Sbjct: 361 LHEMSE---RKVQADSVTCNTLINAYCKIGDLNSALKFKTKMLEAGLTPNSFTYKALIHG 417
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
CK + A ELL ML P+ TY + C+ D ++ + +G
Sbjct: 418 FCKTSELESAKELLFGMLDAGFSPNYRTYSWIVDSYCKKDNTDAVLALPDEFLSKGFCLN 477
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
++ + A I+ R E A K + K S +++Y+ LA + K+ N A ++L
Sbjct: 478 ISLYRALIRRLCKIERIECAEKLLYHMEGKGISGDSVIYTSLAFSYWKSGNTNAASDMLE 537
Query: 461 EMMKNGLRPNVSVYR 475
EM + L V +YR
Sbjct: 538 EMARRRLMITVKIYR 552
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 89/179 (49%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN +I R + +G R +L MR G EP + TY ++ +CK G+ +A L +
Sbjct: 262 VVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFD 321
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M+ P+A+TY I C G + AF++ ++MVK+G+ P ++T+ + F+
Sbjct: 322 KMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEG 381
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
R +A + K + Y++L + + + N A ++ +EM+ G+ P Y
Sbjct: 382 RMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTY 440
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 89/202 (44%), Gaps = 4/202 (1%)
Query: 273 IEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITL 332
+EM VL EM + I T V +NI++ +C+ K R+ + M +G +P +
Sbjct: 208 MEMAWVL-YAEMFRLRISST---VYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVV 263
Query: 333 TYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
+YN ++ G A +L+ M + PD+ TY I C+ G+ + A F++M
Sbjct: 264 SYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKM 323
Query: 393 VKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNP 452
V+ GL P T+ I GY E A+ Y K S Y+LL
Sbjct: 324 VEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRM 383
Query: 453 VMAKNVLSEMMKNGLRPNVSVY 474
A +++ EM K G+ P+ Y
Sbjct: 384 GEADDMIKEMRKKGIIPDAITY 405
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 86/183 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI + RR K DL ++ G P + +N ++ C NG A LL+EM
Sbjct: 440 YTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMD 499
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
++ PD +T+ + CR GK + A ++M +RG++P ++ I GY +
Sbjct: 500 RKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIK 559
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA++ + + + Y+ L KN +A+ +L EM+ G+ P+ S Y ++
Sbjct: 560 DAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLI 619
Query: 479 KHL 481
+ +
Sbjct: 620 EGM 622
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 6/161 (3%)
Query: 255 EVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVS-----YYNILIKEMCRR 309
++L+Q G S V A+++ G E A ++K+ +RK +N L++ CR
Sbjct: 462 KILDQ-GVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCRE 520
Query: 310 CDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITY 369
+ R LL EM++ G +P ++YN ++ + G DA + +EML +P +TY
Sbjct: 521 GKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTY 580
Query: 370 EIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
I C+ + D+A +MV +G+ P +T+ + I+G
Sbjct: 581 NALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEG 621
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 76/175 (43%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
VS YN+L+ + D++ EMR+ G P +TYN ++ + G A +L
Sbjct: 367 VSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHN 426
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EML + P +TY I R + A + F +++ +G+ P + A + G+
Sbjct: 427 EMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANG 486
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
E A+ + K + ++ L + A+ +L EM + G++P+
Sbjct: 487 NVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPD 541
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 98/249 (39%), Gaps = 40/249 (16%)
Query: 271 ALIEMFSVLGLYEMAKYV-----IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
+I +S G E A+ + +K E Y LI MC+ + L +M ++
Sbjct: 267 TIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEI 326
Query: 326 GCEPITLTYNYVLGVLCK-----------------------------------NGQDADA 350
G P +TYN ++ C G+ +A
Sbjct: 327 GLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEA 386
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
++++EM + PDAITY I I R G AF+ N+M+ +G++P T+ + I
Sbjct: 387 DDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYV 446
Query: 411 YFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
R ++A D+ S ++++ + H N N A +L EM + + P+
Sbjct: 447 LSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPD 506
Query: 471 VSVYRRVLK 479
+ +++
Sbjct: 507 EVTFNTLMQ 515
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 110/269 (40%), Gaps = 23/269 (8%)
Query: 216 QLLNDF--NVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALI 273
QL++DF +++ CL+ K++ VL++ K + ++L QV G+ + +
Sbjct: 88 QLVSDFIHHLHPHCLDTKSYCLAVVLLARLPSPKLAL----QLLKQVMGTRIATNR---- 139
Query: 274 EMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMC--RRCD--FKGPRDLLVEMRQVGCEP 329
E+F L L + +K + +++L++ C RR D FK M++ G P
Sbjct: 140 ELFDELTLSR-DRLSVKSS----IVFDLLVRVCCELRRADEAFK----CFYMMKEKGIVP 190
Query: 330 ITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFF 389
T N +L + K + A L EM T+ I + C+ GK A F
Sbjct: 191 KIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFI 250
Query: 390 NQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKN 449
M G +P + ++ I GY E A + + K + Y L S K
Sbjct: 251 GFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKE 310
Query: 450 NNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + +M++ GL PN Y ++
Sbjct: 311 GRLEEASGLFDKMVEIGLVPNAVTYNTLI 339
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 107/240 (44%), Gaps = 8/240 (3%)
Query: 250 IWRVVEVLNQV---GGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNI 301
I VE+ N++ G V +I G MA V KK E+ V YN
Sbjct: 174 IKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNT 233
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
+I +C+ + L EM G P TYN ++ C GQ +A L +EM+GR+
Sbjct: 234 IIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRD 293
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
PD +T I + C+ G A F M ++G++P ++T+ A + GY + +A
Sbjct: 294 VMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAK 353
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K + + + Y++L + K+ AK++L+EM L P+ Y +++ L
Sbjct: 354 KVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGL 413
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 93/203 (45%), Gaps = 3/203 (1%)
Query: 276 FSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYN 335
F+V L +M K I T S +N LI +C K +L EM + G EP ++YN
Sbjct: 141 FAVSILGKMFKLGIHPT---ASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYN 197
Query: 336 YVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR 395
++ LCK G + A ++ ++M C PD +TY I C+ + A F ++M+ R
Sbjct: 198 TIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDR 257
Query: 396 GLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMA 455
G+ P + T+ + G+ I + +A + + + ++L K A
Sbjct: 258 GIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEA 317
Query: 456 KNVLSEMMKNGLRPNVSVYRRVL 478
+ V M + G+ PN+S Y ++
Sbjct: 318 RLVFETMTEKGVEPNISTYNALM 340
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 97/234 (41%), Gaps = 40/234 (17%)
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMC 307
V E + + G +S AL++ + + L AK V + R+ V YNILI C
Sbjct: 320 VFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFC 379
Query: 308 RRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAI 367
+ + LL EM P T+TY+ ++ LC+ G+ +A + +EM P+ +
Sbjct: 380 KSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLV 439
Query: 368 TYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLS 427
TY I + C+ G D A M ++ L+P + H I+G FI + E
Sbjct: 440 TYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLE--------- 490
Query: 428 ADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+AK + S++ +G+RP + Y ++K L
Sbjct: 491 --------------------------VAKELFSKLFADGIRPTIRTYTVMIKGL 518
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 85/180 (47%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ L++ +C+ K ++ EM G P +TY+ +L CK+G +A +LL+ M
Sbjct: 406 YSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQ 465
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+ + + I I GK +VA F+++ G++P + T+ IKG +
Sbjct: 466 EKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSD 525
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+AY D ++ Y+++ +N + A ++ EM+ N+S ++ +L
Sbjct: 526 EAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLL 585
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 86/207 (41%), Gaps = 35/207 (16%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K E +S YN L+ C + + + M + GC P +YN ++ CK+ + +
Sbjct: 327 KGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDE 386
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A LL EM + +PD +TY + C+ G+ A N F +M GL P L T++ +
Sbjct: 387 AKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLD 446
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
G+ ++A K LL S+ +K L P
Sbjct: 447 GFCKHGHLDEALK------------------LLKSMQEKK-----------------LEP 471
Query: 470 NVSVYRRVLKHLHTSHQEHMAKCLSSR 496
N+ + +++ + + + +AK L S+
Sbjct: 472 NIVHHTILIEGMFIAGKLEVAKELFSK 498
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 107/250 (42%), Gaps = 15/250 (6%)
Query: 230 EKAFGFLPVLISSKALTKKGIWRVVEVLNQ-VGGSCLVSGVRALIEMFSVLGLYEMAKYV 288
EK GF+ + + K+GI V N + SC V+ + + + + +A +
Sbjct: 224 EKGLGFM------RKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANL 277
Query: 289 IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
I YN +I +C + +L+ EMR G P +TYN ++ CK G
Sbjct: 278 IS--------YNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLH 329
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
LL EM+G+ P+ +TY I C+ G A F+QM RGL+P T+ I
Sbjct: 330 QGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLI 389
Query: 409 KGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLR 468
G+ +AYK + S S + Y+ L + A +L M++ GL
Sbjct: 390 DGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLP 449
Query: 469 PNVSVYRRVL 478
P+V Y V+
Sbjct: 450 PDVVSYSTVI 459
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 83/195 (42%)
Query: 280 GLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
GL +++ V K V Y LI MC+ + ++ +MR G P TY ++
Sbjct: 331 GLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLID 390
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
C+ G +A ++L EM+ P +TY + C +G+ A MV+RGL P
Sbjct: 391 GFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPP 450
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
+ +++ I G+ A++ +K + YS L V A ++
Sbjct: 451 DVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLF 510
Query: 460 SEMMKNGLRPNVSVY 474
EMM+ GL P+ Y
Sbjct: 511 REMMRRGLPPDEVTY 525
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 89/200 (44%), Gaps = 6/200 (3%)
Query: 216 QLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEM 275
++ + V + NE+ + L K L + ++V+ + G S V AL+
Sbjct: 368 EIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEA-YKVLSEMIVSGFSPSVVTYNALVHG 426
Query: 276 FSVLGLYEMAKYVIKK-TER----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPI 330
+ LG + A +++ ER V Y+ +I CR + + EM + G P
Sbjct: 427 YCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPD 486
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN 390
T+TY+ ++ LC + +A +L EM+ R PD +TY I C G+ A +
Sbjct: 487 TVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHD 546
Query: 391 QMVKRGLQPRLATHAAFIKG 410
+MV+RG P T++ I G
Sbjct: 547 EMVQRGFLPDNVTYSVLING 566
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 86/201 (42%), Gaps = 11/201 (5%)
Query: 282 YEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNY 336
Y+ A+ V + R V YN++I+ + + D + + +M + G P +TYN
Sbjct: 188 YDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNT 247
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
++ CK + +A LL M + I+Y I C G+ +M +G
Sbjct: 248 LIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKG 307
Query: 397 LQPRLATHAAFIKGYFIFYRYEDAYKYVVLSAD---KYKSSSNMLYSLLASLHDKNNNPV 453
L P T+ + G F + + ++ +VL ++ K S + + Y+ L + K N
Sbjct: 308 LVPDEVTYNTLVNG---FCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLS 364
Query: 454 MAKNVLSEMMKNGLRPNVSVY 474
A + +M GLRPN Y
Sbjct: 365 RAVEIFDQMRVRGLRPNERTY 385
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 69/181 (38%), Gaps = 5/181 (2%)
Query: 299 YNILIKEMCRRC-----DFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACEL 353
YN ++ + RR D+ + +M + G P TYN ++ + G
Sbjct: 170 YNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGF 229
Query: 354 LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
+ +M P+ +TY I SC+ K A M G+ L ++ + I G
Sbjct: 230 MRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCG 289
Query: 414 FYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
R + + V K + Y+ L + K N +LSEM+ GL PNV
Sbjct: 290 KGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVT 349
Query: 474 Y 474
Y
Sbjct: 350 Y 350
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 79/191 (41%), Gaps = 15/191 (7%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL------------GVL---CK 343
Y++LI + ++ K + LL+++ P +TYN ++ G++ C
Sbjct: 560 YSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCM 619
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
G +A + + ML RN P+A Y + I R G A+N + ++
Sbjct: 620 KGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVA 679
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
A +K ++ + + + + + +L ++ K N NVL+EM
Sbjct: 680 VIALVKALAREGMNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMA 739
Query: 464 KNGLRPNVSVY 474
K+GL P+ ++
Sbjct: 740 KDGLLPDGGIH 750
>gi|225447826|ref|XP_002268129.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Vitis vinifera]
Length = 679
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 153/359 (42%), Gaps = 10/359 (2%)
Query: 128 ATPKQVSEI---IELLRSGDSETESKLLSMSVSLSNASVIEILRVLNSEKVSALCFLKYM 184
A P++VS + I+ L + D E+ L +V LS+A V+ +L + A F +
Sbjct: 200 ADPEEVSRVCRVIDELFALDRNMEAVLDECNVDLSHALVVGVLERFKHARKPAFRFFCWA 259
Query: 185 REIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKA 244
+ F NS + ++ GR +E+M +L + + L + F ++
Sbjct: 260 GQ-KAGFTHNSRTYNAMMSVLGRTRQFESMMGMLGEMGEKGL-LTMETFSIAIKAFAAAK 317
Query: 245 LTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVS----YYN 300
KK + V E++ + V + L++ L + A+ + +K E + + Y
Sbjct: 318 ERKKAVG-VFELMKRYNFDAGVDTINCLLDNLGRAKLGKEAQALFEKLEDRFTPNLRTYT 376
Query: 301 ILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGR 360
+L+ CR + EM G +P + ++ +L L K + +DA +L E M +
Sbjct: 377 VLLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAK 436
Query: 361 NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
P+ TY I I C+ K A +F++MV G QP A + I G+ + +
Sbjct: 437 GPSPNVRTYTILIRDLCKQMKMQEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKV 496
Query: 421 YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
Y + +K + Y+ L L P A + +M++NG++ + Y ++K
Sbjct: 497 YALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQSTLHTYNMMMK 555
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/149 (20%), Positives = 64/149 (42%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
LL EM++ GC TYN ++ ++ DA + ++M+ TY + +
Sbjct: 499 LLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQSTLHTYNMMMKSYF 558
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+++ + +M ++G P ++ FI G R E+A +Y+ +K + +
Sbjct: 559 YTRNYEMGCAVWEEMGRKGCCPDDNSYIVFIGGLIRHGRSEEACRYLEEMIEKGMKAPQL 618
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNG 466
Y+ A+ + P + + + +M G
Sbjct: 619 DYNKFAADFSRAGKPDILEELARKMKFEG 647
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 124/291 (42%), Gaps = 15/291 (5%)
Query: 209 DDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQ-VGGSCL-- 265
+ ++ +LL++ L++ F L L RV+E+L Q + C+
Sbjct: 335 ERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVD----RVIELLEQMLSHGCMPD 390
Query: 266 VSGVRALIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNILIKEMCRRCDFKGPRDLLV 320
V +I F GL + A ++K + Y I++K +C + +L+
Sbjct: 391 VITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMS 450
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M Q GC P +T+N ++ LCK G A ELL++ML C PD I+Y I + G
Sbjct: 451 QMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAG 510
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
K + A N MV +G+ P +++ R + D S +LY+
Sbjct: 511 KTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYN 570
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
+ S K A + + M+ NG PN S Y ++K L + E +AK
Sbjct: 571 AVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLAS---EGLAK 618
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 5/232 (2%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKK-----TERKVSYYNILIKEM 306
RV+E ++ G + ++ G + A +++K E + YN ++K +
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
C + +L+ EM +V C P +T+N ++G LC+NG E+L +M C PD
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
Y I C+ G +VA N+M GL+P + + +KG R+++A + +
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346
Query: 427 SADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
K ++ +++L +N +L +M+ +G P+V Y V+
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVI 398
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 90/207 (43%), Gaps = 5/207 (2%)
Query: 280 GLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
GL+E V+ + + Y +I +C+ + ++L M G +P + Y
Sbjct: 265 GLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCY 324
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N VL LC + +A ELL EM ++C D +T+ I + + C+ G D QM+
Sbjct: 325 NTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLS 384
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM 454
G P + T+ I G+ ++A + + + + Y+++ V
Sbjct: 385 HGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVD 444
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A+ ++S+M++ G PN + ++ L
Sbjct: 445 AEELMSQMIQQGCPPNPVTFNTLINFL 471
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 87/199 (43%), Gaps = 2/199 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+++++ CR F+ +L M GC T N VL +C+ G +A LL ++
Sbjct: 149 YHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLA 208
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C D ++Y + C ++ ++MV+ P + T I GY
Sbjct: 209 FFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLI-GYLCRNGLF 267
Query: 419 DAYKYVVLSADKYKSSSNM-LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ V+ ++ + ++ +Y+ + K + +A +L+ M GL+PNV Y V
Sbjct: 268 ERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTV 327
Query: 478 LKHLHTSHQEHMAKCLSSR 496
LK L ++ + A+ L S
Sbjct: 328 LKGLCSAERWKEAEELLSE 346
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 88/205 (42%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
+++ +C R ++L EM GC PI Y+ +L C++G ++ +LE M +
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG 176
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
C D + + C G D A ++ G + + ++ A +KG + R+ D
Sbjct: 177 CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE 236
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + + + + ++ L +N VL++M ++G P++ +Y ++ +
Sbjct: 237 ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGI 296
Query: 482 HTSHQEHMAKCLSSRYSSLSLGSSV 506
+A + +R S L +V
Sbjct: 297 CKEGHLEVANEILNRMPSYGLKPNV 321
>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 721
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 100/425 (23%), Positives = 180/425 (42%), Gaps = 35/425 (8%)
Query: 76 SSSFCHLTHPSCHSSQNLYFSNCNGSC----RSQISKLGLLTS--RCISSFAMV-NGPYA 128
SSS+ H++ P ++ +F N S + + +LTS R S+ + N P+
Sbjct: 4 SSSYSHVSRPPLFYTKPKFFCNFRSSTVIQDKEDFQFISILTSILRGKQSWRIAFNDPFI 63
Query: 129 T----PKQVSEIIELLRSGDSE--TESKLLSMSVSLSNASVIEILRVLNSEKVSALCFLK 182
+ P V +++ +L DS + L+ +LS A + +LR V L
Sbjct: 64 SRNLKPSHVDKVLMMLSLNDSRLMKDCNLMPEVRTLS-ALLNGLLRFRRFNDVLLLFDDI 122
Query: 183 YMREIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISS 242
+ P+ Y I S V+ + L D+ +++++ Q L+ + VLI
Sbjct: 123 VSANVQPDIY----IYSAVVRSLCELKDFNKAKEMIHWMEFNQCKLSIVVYN---VLIHG 175
Query: 243 KALTKKGIWRVVEVLNQVGGSCLVS-GVRALIEMFSVLGLYEMAKYVIKKTERKV----- 296
+++ IW +E+ N CL+ G+ A + + G + A+ + K+ K
Sbjct: 176 LCKSRR-IWEALEIKN-----CLMQKGLEA--NVVTYYGKFNEAELLFKEMGEKGLCANH 227
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
Y+ILI CRR + L +M + E YN ++ CK G + A +E
Sbjct: 228 ITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDE 287
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
M+ + P +TY I C G++ AF +N+M +G+ P T A I G
Sbjct: 288 MIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANM 347
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
+A + ++ S + Y+++ H ++ N A ++L EM+ G P+ YR
Sbjct: 348 MAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRP 407
Query: 477 VLKHL 481
++ L
Sbjct: 408 LISGL 412
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 85/180 (47%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ +I +CR L EM++ P +TYN ++ C++G ++A LL+EM+
Sbjct: 335 FTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMV 394
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
G+ PD TY I C VG+ A F + + K + ++A + GY R++
Sbjct: 395 GKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFK 454
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA + ++ + + Y++L + ++ +L EM +GLRP+ +Y ++
Sbjct: 455 DAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMI 514
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 86/209 (41%), Gaps = 5/209 (2%)
Query: 271 ALIEMFSVLGLYEMAKY-----VIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
+LI + LG AKY + K V Y LI C ++ + EM
Sbjct: 267 SLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAK 326
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P T T+ ++ LC+ A+A L EM R P +TY + I CR G A
Sbjct: 327 GISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEA 386
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
F+ ++MV +G P T+ I G R +A ++V + +NM YS L
Sbjct: 387 FHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHG 446
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ K A + M++ G+ ++ Y
Sbjct: 447 YCKEGRFKDAVSACRVMVERGVAMDLVCY 475
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 107/264 (40%), Gaps = 19/264 (7%)
Query: 234 GFLPVLISSKALT----KKGIW-RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYV 288
G P +++ +L +G W + +V N++ + + S L M
Sbjct: 292 GLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEA 351
Query: 289 IK----KTERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
I+ ERK+ YN++I+ CR + LL EM G P T TY ++
Sbjct: 352 IRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISG 411
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
LC G+ ++A E ++++ + + + Y + C+ G+F A + MV+RG+
Sbjct: 412 LCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMD 471
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSS---SNMLYSLLASLHDKNNNPVMAKN 457
L +A I G R D L + + ++Y+ + H K N A
Sbjct: 472 LVCYAILIDGT---AREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFG 528
Query: 458 VLSEMMKNGLRPNVSVYRRVLKHL 481
+ M+ G PNV Y ++ L
Sbjct: 529 LWDIMVDEGCLPNVVTYTALINGL 552
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 89/212 (41%), Gaps = 23/212 (10%)
Query: 208 LDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALT----KKGIWRVVEVL------ 257
+D + L F ++ + ++E G LP +++ AL K G+ E+L
Sbjct: 514 IDRHSKAGNLKEAFGLWDIMVDE---GCLPNVVTYTALINGLCKAGLMDKAELLSKETLV 570
Query: 258 -----NQVGGSCLVSGVRALIEMFSVLGLYE-MAKYVIKKTERKVSYYNILIKEMCRRCD 311
N + C + + M + L+ M K + T VSY NILI+ CR
Sbjct: 571 SDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLKGFLATT---VSY-NILIRGFCRLGK 626
Query: 312 FKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEI 371
+ LL M P +TY+ ++ CK +A +L ML + PD + Y
Sbjct: 627 IEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSF 686
Query: 372 FIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
+ C G+ + AF ++M++RG++ T
Sbjct: 687 LVHGCCIAGELEKAFELRDEMIRRGMRSNHVT 718
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 13/181 (7%)
Query: 249 GIWRVVEVLNQVGGSCL--VSGVRALIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNI 301
G+W ++ V CL V ALI GL + A+ + K+T Y
Sbjct: 528 GLWDIM-----VDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGC 582
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
+ + R + + L M + G T++YN ++ C+ G+ +A +LL M +
Sbjct: 583 FLDHLTRGGNMEKAVQLHHAMLK-GFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDND 641
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
PD ITY I C+ A ++ M+ +GL+P ++ + G I E A+
Sbjct: 642 ILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAF 701
Query: 422 K 422
+
Sbjct: 702 E 702
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 99/232 (42%), Gaps = 19/232 (8%)
Query: 263 SCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
S L++G+ VL L++ V + + Y+ +++ +C DF ++++ M
Sbjct: 100 SALLNGLLRFRRFNDVLLLFD--DIVSANVQPDIYIYSAVVRSLCELKDFNKAKEMIHWM 157
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
C+ + YN ++ LCK+ + +A E+ ++ + + +TY GKF
Sbjct: 158 EFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTY---------YGKF 208
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML---- 438
+ A F +M ++GL T++ I + ++A ++ DK +S
Sbjct: 209 NEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFL----DKMTKASIEFTVYP 264
Query: 439 YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
Y+ L + + K N AK EM+ GL P V Y ++ + H A
Sbjct: 265 YNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKA 316
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 75/210 (35%), Gaps = 34/210 (16%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ILI R D + LL EM G P + Y ++ K G +A L + M+
Sbjct: 475 YAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMV 534
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFD------------------VAFNFFNQMVKRG--LQ 398
C P+ +TY I C+ G D + + F + RG ++
Sbjct: 535 DEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNME 594
Query: 399 PRLATHAAFIKGYFI--------------FYRYEDAYKYVVLSADKYKSSSNMLYSLLAS 444
+ H A +KG+ + E+A K + D + YS +
Sbjct: 595 KAVQLHHAMLKGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIY 654
Query: 445 LHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
K +N A + M+ GL+P+ Y
Sbjct: 655 EQCKRSNLQEAIKLWHTMLDKGLKPDTLAY 684
>gi|222640196|gb|EEE68328.1| hypothetical protein OsJ_26607 [Oryza sativa Japonica Group]
Length = 461
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 83/182 (45%), Gaps = 2/182 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVG--CEPITLTYNYVLGVLCKNGQDADACELLEE 356
YNIL+K +C + +LL M G C P ++Y+ ++ L K G A E
Sbjct: 172 YNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKEGDSDKAYSTYHE 231
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
ML R PD +TY + C+ D A + N+MVK G+ P T+ + + GY +
Sbjct: 232 MLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQ 291
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
++A + + Y+ L KN + A+ +L M+K GL+PNV Y
Sbjct: 292 SKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYST 351
Query: 477 VL 478
+L
Sbjct: 352 LL 353
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 61/116 (52%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN ++ +C+ D+L M + G P +TYN ++ C +GQ +A +LE
Sbjct: 241 VVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILE 300
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
+M PDA+TY + Y C+ G+ A + M+KRGL+P + T++ + GY
Sbjct: 301 KMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHGY 356
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 77/175 (44%), Gaps = 37/175 (21%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML--GRNCHPDAITYEIFIVY 375
+L M ++GC P +YN +L LC + +A ELL M G +C PD ++Y I
Sbjct: 156 VLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDG 215
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
+ G D A++ +++M++RG+ P + T Y +V + K
Sbjct: 216 LFKEGDSDKAYSTYHEMLERGILPDVVT-----------------YNTIVAALCK----- 253
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
A DK A +VL+ M+KNG+ P+ Y ++ +S Q A
Sbjct: 254 -------AQAMDK------AMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEA 295
>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 102/220 (46%), Gaps = 7/220 (3%)
Query: 280 GLYEMAKYVIKK-TERKVSYYNILIKEMCRRCDFKGPRDLLVE----MRQVG-CEPITLT 333
G E AKY++ + + S ++ + + + C DL++E M G C IT+
Sbjct: 643 GAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITV- 701
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
YN ++ VLC NG A +LEEM GR PD IT+ I+ + G D AF+ ++QM+
Sbjct: 702 YNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQML 761
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPV 453
G+ P +AT + G R ++ + + SN+ Y +L + + K +N V
Sbjct: 762 YHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKV 821
Query: 454 MAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
A + EM+ G P VS Y ++ AK L
Sbjct: 822 EAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKEL 861
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 106/271 (39%), Gaps = 42/271 (15%)
Query: 253 VVEVLNQVGG--SCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKE 305
+ EV+ + GG V G +L++ + +G E A V ++ + + V YN L+
Sbjct: 159 LAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAG 218
Query: 306 MCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPD 365
+CR + RD++ M++ G EP +TY + C+ DA L EEM+ + PD
Sbjct: 219 LCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPD 278
Query: 366 AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE------- 418
+T + C+ G+F A+ F +M K G P T+ I R
Sbjct: 279 VVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLG 338
Query: 419 ---------DAYKYVVL-----SADKYKSSSNMLYSLLASLHDKN--------------N 450
D Y L K + +M L+ H N
Sbjct: 339 EVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAG 398
Query: 451 NPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
N A+ VLSEM + + PNV + ++ L
Sbjct: 399 NVDGAEQVLSEMEEKSISPNVVTFSSIINGL 429
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 82/196 (41%), Gaps = 11/196 (5%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+ I +C K L EM+ G +P +TYN ++ + G+ A A +LL M
Sbjct: 562 YNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMK 621
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+ ITY IV G + A N+M G P TH ++ R +
Sbjct: 622 RSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSD 681
Query: 419 DAYKYVVLSADKYKSSSNM-----LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
++L ++ ++ + +Y+ L + N A VL EM G+ P+
Sbjct: 682 -----LILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTIT 736
Query: 474 YRR-VLKHLHTSHQEH 488
+ +L H + H ++
Sbjct: 737 FNALILGHFKSGHLDN 752
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 4/185 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI + + + + E+ + P + YN + LC G+ +A LEEM
Sbjct: 527 YTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQ 586
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD +TY I R GK A N M + ++P L T++ I G F E
Sbjct: 587 STGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVE 646
Query: 419 DAYKYVV--LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
A KY++ +S+ + +S +L + + ++ + + MM GL +++VY
Sbjct: 647 KA-KYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILE-IHEWMMNAGLCADITVYNT 704
Query: 477 VLKHL 481
+++ L
Sbjct: 705 LVRVL 709
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 22/171 (12%)
Query: 314 GPRDLLV-EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIF 372
G D+++ EM++ G EP LTY+ ++ K +A L EM+G+ P TY
Sbjct: 786 GESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNAL 845
Query: 373 IVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYK 432
I +VG A FN+M RG+ P T+ + G+ + K+
Sbjct: 846 ISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKF--------- 896
Query: 433 SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV-YRRVLKHLH 482
L + +K +P +K LS + + +P +S RR+LK+L+
Sbjct: 897 ---------LKDMKEKGFSP--SKGTLSSISRAFSKPGMSWEARRLLKNLY 936
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 51/114 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ +C+ +D+ P +TY ++ LCK G A ++L EM
Sbjct: 352 YTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEME 411
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
++ P+ +T+ I + G A ++ +M +RG+ P + T+ I G F
Sbjct: 412 EKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSF 465
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 75/164 (45%), Gaps = 4/164 (2%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L EM + G + Y ++ L K G A ++ +E+ +N PDA+ Y +FI C
Sbjct: 511 LFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLC 570
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKS-SSN 436
+GK A +F +M GL+P T+ I + A K +L+ K S N
Sbjct: 571 MLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALK--LLNGMKRSSIKPN 628
Query: 437 ML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
++ YS L + AK +L+EM +G P +RRVL+
Sbjct: 629 LITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQ 672
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 52/268 (19%), Positives = 99/268 (36%), Gaps = 40/268 (14%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI+ G + A+ V+ + E K V ++ +I + +R D + EM++ G
Sbjct: 390 LIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERG 449
Query: 327 CEPITLTYNYVLG-----------------VLC------------------KNGQDADAC 351
+P +TY V+ +LC KNG+ A
Sbjct: 450 IDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAE 509
Query: 352 ELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
L EM R D + Y I + G AF ++ ++ L P + FI
Sbjct: 510 ALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCL 569
Query: 412 FIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
+ + ++A ++ + Y+ + + + A +L+ M ++ ++PN+
Sbjct: 570 CMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNL 629
Query: 472 SVYRRVLKHLHTSHQEHMAKCLSSRYSS 499
Y ++ L + AK L + SS
Sbjct: 630 ITYSTLIVGLFEAGAVEKAKYLLNEMSS 657
>gi|255660834|gb|ACU25586.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 418
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ +L EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 206 VYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKNGKVDLAMEIYK 265
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G A N N+M +GL+P T+ I G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLIDGSCKDG 325
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A++Y ++ ++ Y+ L S + V A+ +L EM+ GL+P+ Y
Sbjct: 326 DLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDSGTYT 385
Query: 476 RVL 478
++
Sbjct: 386 MII 388
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 78/181 (43%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ C+ + + + + +R+ G P +++N ++ + G L M
Sbjct: 138 FFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKGFRLKSAM 197
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
PD TY + I C+ K D A F +M+ +GL P T I G+ +
Sbjct: 198 HASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKNGKV 257
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ A + + S + Y+ L K + A+N+++EM GL+P+ Y +
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYTTL 317
Query: 478 L 478
+
Sbjct: 318 I 318
>gi|356557306|ref|XP_003546958.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 654
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 100/199 (50%), Gaps = 3/199 (1%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L+E +Y K + V ++ L+ C+ + +LV+M+ +G EP + YN +LG
Sbjct: 249 LFEDMRYRWKPS---VKHFTSLLYGWCKEGKLMEAKHVLVQMKDMGIEPDIVVYNNLLGG 305
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
+ G+ DA +LL+EM + C P+A +Y + I C+ + + A F +M G Q
Sbjct: 306 YAQAGKMGDAYDLLKEMRRKRCEPNATSYTVLIQSLCKHERLEEATRLFVEMQTNGCQAD 365
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
+ T++ I G+ + + + Y+ + + + ++Y + H+K K +++
Sbjct: 366 VVTYSTLISGFCKWGKIKRGYELLDEMIQQGHFPNQVIYQHIMLAHEKKEELEECKELVN 425
Query: 461 EMMKNGLRPNVSVYRRVLK 479
EM K G P++S+Y V++
Sbjct: 426 EMQKIGCAPDLSIYNTVIR 444
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 62/158 (39%), Gaps = 35/158 (22%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K+ E + Y +LI+ +C+ + L VEM+ GC+ +TY+ ++ CK G+
Sbjct: 325 KRCEPNATSYTVLIQSLCKHERLEEATRLFVEMQTNGCQADVVTYSTLISGFCKWGKIKR 384
Query: 350 ACELLEEMLGRN-----------------------------------CHPDAITYEIFIV 374
ELL+EM+ + C PD Y I
Sbjct: 385 GYELLDEMIQQGHFPNQVIYQHIMLAHEKKEELEECKELVNEMQKIGCAPDLSIYNTVIR 444
Query: 375 YSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+C++G+ +N+M GL P + T I G+
Sbjct: 445 LACKLGEVKEGIQLWNEMESSGLSPGMDTFVIMINGFL 482
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 127/288 (44%), Gaps = 18/288 (6%)
Query: 198 CSLVIDN---CGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVV 254
S+V+D GR+DD R+LL++ + V LN A + P+L + +K RV
Sbjct: 136 ASVVVDGFCKAGRMDD---ARRLLDEMPRHGVKLN--ACCYNPLLDTYT--RQKNDARVA 188
Query: 255 EVLNQV---GGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEM 306
EVL ++ G V L++ S G + V + +RK V +Y+ +I
Sbjct: 189 EVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAY 248
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
CR + + ++ E G EP TY ++ CK GQ A LL +M R +
Sbjct: 249 CRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQ 308
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
I + I CR G D A M + G+Q + T+ G R EDA K + +
Sbjct: 309 IIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHI 368
Query: 427 SADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ S+ + Y+ L S+H K + V A+ + +M G RP+V Y
Sbjct: 369 MTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTY 416
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN L +CR + + LL M + G E ++Y ++ + K G +A L
Sbjct: 343 VYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFR 402
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M G+ P +TY + I + G A F +M K+GL P + T+AA + G+ +
Sbjct: 403 DMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNG 462
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ + A + + + + Y+ L S K A M+ GL P+ ++Y
Sbjct: 463 KVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYS 522
Query: 476 RVLKHLHTSHQE 487
++ LHT ++
Sbjct: 523 MLVGSLHTDKRK 534
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 97/240 (40%), Gaps = 8/240 (3%)
Query: 250 IWRVVEVLNQVGGSCLVSGVR---ALIEMFSVLGLYEMAKYVIKKTE-RKVSY----YNI 301
+ R EV ++ G+ + R ALI F +G E A+ ++ + R V + +N
Sbjct: 254 VRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNT 313
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
+I CR ++ M ++G + TYN + LC+ + DA +LL M
Sbjct: 314 MIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENG 373
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
+ ++Y I + G A F M +G +P + T+ I GY +A
Sbjct: 374 VESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAE 433
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
++ K Y+ L H N +A + EM + G +PNV Y ++ L
Sbjct: 434 RFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGL 493
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 57/133 (42%), Gaps = 5/133 (3%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI + S G A+ + + E K V YN++I + + EM + G
Sbjct: 384 LISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKG 443
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
P TY ++ C NG+ A L EEM R P+ + Y I + G+ + AF
Sbjct: 444 LVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAF 503
Query: 387 NFFNQMVKRGLQP 399
F++ M+ GL P
Sbjct: 504 QFYDNMLAAGLTP 516
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 96/207 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN +I C R F+ R + M+ G EP TYN + LCK G+ +A L+
Sbjct: 251 VVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLIC 310
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML P+A+TY I C G D A+ + ++M+ +G+ L T+ FI F+
Sbjct: 311 KMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEG 370
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R DA + +K + +++L + + + + A +L EM+ G++P + Y
Sbjct: 371 RMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYT 430
Query: 476 RVLKHLHTSHQEHMAKCLSSRYSSLSL 502
++ L ++ A L S+ L
Sbjct: 431 SLIYVLGKRNRMKEADALFSKIQQEGL 457
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 91/200 (45%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
+ + V K + + Y LI + +R K L +++Q G P + +N ++ C
Sbjct: 414 LDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCA 473
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
NG A +LL+EM PD ITY + CR GK + A ++M +RG++P +
Sbjct: 474 NGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHIS 533
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
+ I GY +DA++ + + Y+ L KN A+ +L EM+
Sbjct: 534 YNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMV 593
Query: 464 KNGLRPNVSVYRRVLKHLHT 483
G+ P+ S Y +++ + T
Sbjct: 594 SKGITPDDSTYLSIIEAMET 613
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 80/180 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+ I + +++ EMR+ G P +T+N ++ C+ G A LL+EM+
Sbjct: 359 YNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMV 418
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
G+ P +TY I + + A F+++ + GL P + A I G+ +
Sbjct: 419 GKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNID 478
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A++ + + + Y+ L + + A+ +L EM + G++P+ Y ++
Sbjct: 479 RAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLI 538
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 96/203 (47%), Gaps = 9/203 (4%)
Query: 210 DYETMRQLLNDFNVYQVCLNE-KAFGFLPVLISSK-ALTKKGIWRVVEVLNQVGGSCLVS 267
D T R + D +Y + ++ + G + ++ K A+ KKGI V N CL++
Sbjct: 358 DGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYN-----CLIT 412
Query: 268 GVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGC 327
G + S GL + K K E V YN+LI +C + + + LL EM +VG
Sbjct: 413 GFSRSGDWRSASGLLDEMKE--KGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGL 470
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
EP LTYN ++ C G A E+ M + +TY +FI Y C++GK D A +
Sbjct: 471 EPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEAND 530
Query: 388 FFNQMVKRGLQPRLATHAAFIKG 410
N+M+ + L P T+ +G
Sbjct: 531 LLNEMLDKCLVPNGITYETIKEG 553
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 89/201 (44%), Gaps = 3/201 (1%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L EM + I T + +LI C+ + + EM+Q G +TYN ++
Sbjct: 252 LKEMVEAGISPT---AVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISG 308
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
LC G+ + +L+EEM P+ IT+ + C+ G A ++ + M +R ++P
Sbjct: 309 LCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPD 368
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
+ + I GY + EDA A K S + Y+ L + ++ + A +L
Sbjct: 369 VVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLD 428
Query: 461 EMMKNGLRPNVSVYRRVLKHL 481
EM + G+ +V Y ++ L
Sbjct: 429 EMKEKGIEADVVTYNVLIGAL 449
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 69/125 (55%), Gaps = 6/125 (4%)
Query: 299 YNILIKEMCRRCDFKGPRD---LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
YNILI C++ + P+D LL EM + GCEP +TYN ++ L K+G+ DA L +
Sbjct: 175 YNILIDGYCKQ---ERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQ 231
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
ML R+C P T+ + I C+VG+ D+A+ F M RG P + T+ I G
Sbjct: 232 MMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRAN 291
Query: 416 RYEDA 420
R +DA
Sbjct: 292 RIDDA 296
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 93/207 (44%), Gaps = 5/207 (2%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L EM KY E YN L+ + + + +L M + C+P T+N ++ +
Sbjct: 195 LQEMVKY---GCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDM 251
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
CK GQ A EL + M R C PD TY I I +CR + D A +M + G P
Sbjct: 252 FCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPD 311
Query: 401 LATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
+ T+ + + G + ++AY+ Y VL Y +L+ L K+ A+ +L
Sbjct: 312 VVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLC-KSRRLDDAEKLL 370
Query: 460 SEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
EM +NG P+V Y ++ + Q
Sbjct: 371 REMERNGSAPDVVAYTILIHGFCKADQ 397
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 85/177 (48%), Gaps = 7/177 (3%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMR--QVGCEPITLTYNYVLGVLCKNGQDADACELL 354
+ YN +IK +C D LV R Q C P +TY ++ LCK+ + +DA +L
Sbjct: 69 AVYNTIIKGLC---DNGRVDSALVHYRDMQRHCAPSVITYTILVDALCKSARISDASLIL 125
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
E+M+ C P+ +TY I C++G D A FNQM++ P + T+ I GY
Sbjct: 126 EDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQ 185
Query: 415 YRYEDAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
R +D K ++ KY N + Y+ L K+ + A N+ M++ +P+
Sbjct: 186 ERPQDGAK-LLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPS 241
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 84/191 (43%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI C+ + L +M + C P TYN ++ CK + D +LL+
Sbjct: 137 VVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQ 196
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM+ C P+ ITY + + GK+ AFN M++R +P T I +
Sbjct: 197 EMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVG 256
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ + AY+ L D+ Y+++ S + N A+ +L M + G P+V Y
Sbjct: 257 QLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYN 316
Query: 476 RVLKHLHTSHQ 486
++ L + Q
Sbjct: 317 SIVSGLCKASQ 327
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 76/179 (42%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y IL+ +C+ +L +M + GC P +TYN ++ CK G +A L
Sbjct: 102 VITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFN 161
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML +C PD TY I I C+ + +MVK G +P T+ +
Sbjct: 162 QMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSG 221
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+Y DA+ + + S+ ++L+ + K +A + M G P++ Y
Sbjct: 222 KYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTY 280
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 80/188 (42%), Gaps = 1/188 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ LI C+ DF+ LL EM + G P YN ++ LC NG+ D+ + +
Sbjct: 36 YSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGR-VDSALVHYRDM 94
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R+C P ITY I + C+ + A M++ G P + T+ I G+ +
Sbjct: 95 QRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMD 154
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + S Y++L + K P +L EM+K G PN Y ++
Sbjct: 155 EAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLM 214
Query: 479 KHLHTSHQ 486
L S +
Sbjct: 215 DSLVKSGK 222
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 74/177 (41%), Gaps = 40/177 (22%)
Query: 272 LIEMFSVLGLYEMAKYVIK-KTER----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
+I+MF +G ++A + + T+R + YNI+I CR R LL M + G
Sbjct: 248 MIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAG 307
Query: 327 CEPITLTYNYVLGVLCKNGQ---------------------------DA--------DAC 351
C P +TYN ++ LCK Q D DA
Sbjct: 308 CPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAE 367
Query: 352 ELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
+LL EM PD + Y I I C+ + D + FF++M+ +G P + T++ I
Sbjct: 368 KLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVI 424
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 1/144 (0%)
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N +L + + +A +L + L C PD+ITY I C+ F A+ ++M K
Sbjct: 2 NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM 454
RG+ P A + IKG R + A + ++ + S + Y++L K+
Sbjct: 62 RGIVPHNAVYNTIIKGLCDNGRVDSALVH-YRDMQRHCAPSVITYTILVDALCKSARISD 120
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVL 478
A +L +M++ G PNV Y ++
Sbjct: 121 ASLILEDMIEAGCAPNVVTYNTLI 144
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 55/140 (39%), Gaps = 12/140 (8%)
Query: 260 VGGSCLVSGVRALIEMFSVL--GLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRD 317
V G C S V E++ VL G Y + V + LI +C+
Sbjct: 319 VSGLCKASQVDEAYEVYEVLRNGGYFL----------DVVTCSTLIDGLCKSRRLDDAEK 368
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
LL EM + G P + Y ++ CK Q + EML + C P ITY I I C
Sbjct: 369 LLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLC 428
Query: 378 RVGKFDVAFNFFNQMVKRGL 397
+ + M++RG+
Sbjct: 429 KSARVRDGCMLLKTMLERGV 448
>gi|225443015|ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Vitis vinifera]
Length = 624
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 149/377 (39%), Gaps = 10/377 (2%)
Query: 114 SRCISSFAMVNGPYATP-----KQVSEIIELLRSGDSETESKLLSMSVSLSNASVIEILR 168
SR SS ++ P + ++S I+ R + E L + S ++ V ++L+
Sbjct: 29 SRLFSSQTILQDPNSLSSSQYINEISRILSDFRDPHHDLERPLTAFSQKITPGLVEQVLK 88
Query: 169 VLNSEKVSALCFLKYMREIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCL 228
+ SA F + + +P F + + +++D G + + L+D + C
Sbjct: 89 RCKNLGFSAHRFFLWAKR-LPGFEHSKESYHILVDILGSSKQFPLIWDFLSDMRETRCCE 147
Query: 229 NEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYV 288
+L +A R + G V V L+ + + A+
Sbjct: 148 ICPEIFWLIFRAYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEF 207
Query: 289 IKKTERKV----SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKN 344
K +V Y+IL++ D R L EMR+ GC + YN +L LCK
Sbjct: 208 FDKVNVEVMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKG 267
Query: 345 GQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
G +A +L EM PDA +Y IFI C V AF ++M + L P + T+
Sbjct: 268 GNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTY 327
Query: 405 AAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMK 464
+K + ++AY+ + ++ S Y+ + + H + A ++S M K
Sbjct: 328 NCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEK 387
Query: 465 NGLRPNVSVYRRVLKHL 481
P+ Y VLK L
Sbjct: 388 ENCMPDRHTYNMVLKML 404
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 26/245 (10%)
Query: 180 FLKYMREIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVL 239
F K E+MP N+ S+++ G + D R+L + ++ A+ L
Sbjct: 208 FDKVNVEVMP----NAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSL--- 260
Query: 240 ISSKALTKKG-IWRVVEVLNQVGGSCLVSG-------VRALIEMFSVLGLYEMAKYVIKK 291
+AL K G + ++ ++G + L +RA E+ + ++ V+ +
Sbjct: 261 --LEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQ----VLDR 314
Query: 292 TER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQ 346
R V YN ++K++C+ LL EM + G P +YN + C + +
Sbjct: 315 MRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHCDHCE 374
Query: 347 DADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAA 406
A L+ M NC PD TY + + RVG+FD + + M +RG P +T+A
Sbjct: 375 VNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGGMEERGFYPAASTYAV 434
Query: 407 FIKGY 411
+ G+
Sbjct: 435 MVHGF 439
>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 95/191 (49%), Gaps = 6/191 (3%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
M + IK T + YN L++ R +G R ++ EM+ G +P TYN +L +C
Sbjct: 252 MESFGIKPT---IVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCN 308
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
G+ A E+L EM G PD+++Y I I G + AF + ++MVK+G+ P T
Sbjct: 309 EGR---ASEVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYT 365
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
+ I G F+ + E A + +K ++ Y+++ + + ++ + A + EMM
Sbjct: 366 YNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMM 425
Query: 464 KNGLRPNVSVY 474
+G++P Y
Sbjct: 426 TDGIKPTQFTY 436
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNI+I C+ D K L EM G +P TY ++ VLC+ + +A EL E+++
Sbjct: 401 YNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVV 460
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
G+ PD + + C G D AF+ +M + + P T+ ++G ++E
Sbjct: 461 GKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFE 520
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + + + ++ Y+ L S + K + A V EM+ G P + Y +L
Sbjct: 521 EARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALL 580
Query: 479 KHLHTSHQEHMAKCL 493
K L + +A+ L
Sbjct: 581 KGLSKNQDGELAEEL 595
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 80/199 (40%), Gaps = 35/199 (17%)
Query: 286 KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNG 345
K V K + + N L+ C + LL EM ++ +P +TYN ++ LC G
Sbjct: 458 KVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEG 517
Query: 346 QDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
+ +A EL+ EM R PD I+Y I + G AF ++M+ G P L T+
Sbjct: 518 KFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYN 577
Query: 406 AFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKN 465
A +KG KN + +A+ +L EM
Sbjct: 578 ALLKGL-----------------------------------SKNQDGELAEELLREMKSE 602
Query: 466 GLRPNVSVYRRVLKHLHTS 484
G+ PN S + V++ + S
Sbjct: 603 GIVPNDSSFCSVIEAMSKS 621
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 72/166 (43%), Gaps = 19/166 (11%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M++ G +P T T N++L +L + + +A +M + T+ I I C+ GK
Sbjct: 182 MKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGK 241
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
A F M G++P + T+ ++GY + R E A +++S K K L
Sbjct: 242 LKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGA--RMIISEMKSKGFQPDL--- 296
Query: 442 LASLHDKNNNPVM--------AKNVLSEMMKNGLRPNVSVYRRVLK 479
+ NP++ A VL EM GL P+ Y +++
Sbjct: 297 ------QTYNPILSWMCNEGRASEVLREMKGIGLVPDSVSYNILIR 336
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 70/198 (35%), Gaps = 38/198 (19%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +NI+I +C+ K + L M G +P +TYN ++ G+ A ++
Sbjct: 226 VYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIIS 285
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM + PD TY + + C G+ A +M GL P ++ I+G
Sbjct: 286 EMKSKGFQPDLQTYNPILSWMCNEGR---ASEVLREMKGIGLVPDSVSYNILIRGCSNNG 342
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A+ Y EM+K G+ P Y
Sbjct: 343 DLETAFAY-----------------------------------RDEMVKQGMVPTFYTYN 367
Query: 476 RVLKHLHTSHQEHMAKCL 493
++ L ++ A+ L
Sbjct: 368 TLIHGLFMENKIEAAEIL 385
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 101/244 (41%), Gaps = 5/244 (2%)
Query: 243 KALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVI-----KKTERKVS 297
KA WR+ ++ + G A I+ +G E A V K E
Sbjct: 447 KARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEF 506
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
Y LI C+ F L M GC P ++T+N +L L K G+ DA L++ M
Sbjct: 507 LYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVM 566
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
+ P TY I I R FD A F +QM+ G QP + T+ AFIK Y R
Sbjct: 567 GKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRL 626
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+A + VV ++ + +Y +L + + A VL M G P+ Y +
Sbjct: 627 LEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSIL 686
Query: 478 LKHL 481
LKHL
Sbjct: 687 LKHL 690
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 5/189 (2%)
Query: 295 KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
+VSY N LI C +L +M++ GC P TY ++ C+ G++ +A +
Sbjct: 260 EVSYTN-LIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFF 318
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
EEM+ P+ TY + I Y C+VGK D + M+++GL + A I GY
Sbjct: 319 EEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKR 378
Query: 415 YRYEDAYKYV-VLSADKYKSSSNMLYSLLASL-HDKNNNPVMAKNVLSEMMKNGLRPNVS 472
EDA + + +K +S L+ K+ + MA +L++M +N L PN+
Sbjct: 379 GMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMA--LLNKMYENKLSPNLV 436
Query: 473 VYRRVLKHL 481
Y ++ L
Sbjct: 437 TYNTLIHGL 445
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 79/180 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI C+ + + M Q GC ++Y ++ C+ G+ +A EL +M
Sbjct: 228 YTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMK 287
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C PD TY + + C VGK A FF +MV+ G++P + T+ I + + +
Sbjct: 288 EDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMD 347
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ + + +K SS + ++ L + K A VL M N + PN Y ++
Sbjct: 348 EGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELI 407
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 81/202 (40%)
Query: 280 GLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
G+ ++ + K V +N LI C+R + +L M+ P + TYN ++
Sbjct: 349 GMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELIC 408
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
C+ A LL +M P+ +TY I C+ D A+ + M+K G P
Sbjct: 409 GFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVP 468
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
T AFI + E A++ +K+ ++ LY+ L + K A +
Sbjct: 469 DQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLF 528
Query: 460 SEMMKNGLRPNVSVYRRVLKHL 481
M+ G PN + +L L
Sbjct: 529 KRMLFEGCFPNSITFNVLLDGL 550
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 72/181 (39%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C+ L M + G P T+ + LCK G+ A ++ E +
Sbjct: 438 YNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLK 497
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
++ + Y I C+ KF A F +M+ G P T + G + E
Sbjct: 498 EKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVE 557
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA V + + Y++L + ++ A L +M+ +G +PNV Y +
Sbjct: 558 DAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFI 617
Query: 479 K 479
K
Sbjct: 618 K 618
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 49/118 (41%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V Y +LI C+ ++L M + G + +N ++ CK G DA
Sbjct: 327 EPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAIC 386
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+L+ M P++ TY I CR D A N+M + L P L T+ I G
Sbjct: 387 VLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHG 444
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 73/180 (40%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N ++ C+ + + + + G + TY ++ CK + DA ++ E M
Sbjct: 193 FNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMP 252
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C + ++Y I C VGK D A F QM + G P + T+ + + +
Sbjct: 253 QEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKET 312
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A K+ + + Y++L K +LS M++ GL +V + ++
Sbjct: 313 EALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALI 372
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 89/232 (38%), Gaps = 32/232 (13%)
Query: 281 LYEMAKYVIKKTERKV----SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNY 336
L E + V+K E + Y++L+ +L+ M GCEP TY+
Sbjct: 626 LLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSI 685
Query: 337 VLGVLC-----KNGQDAD---------------------ACELLEEMLGRNCHPDAITYE 370
+L L K G D L E+M+ + C P+ TY
Sbjct: 686 LLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYS 745
Query: 371 IFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADK 430
I C+V +AF FN M + G+ P H + + +E+A + ++ S +
Sbjct: 746 KLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALR-LLDSMME 804
Query: 431 YKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y +++ Y LL + N A+ + ++ G + V++ +L L
Sbjct: 805 YNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGL 856
>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 950
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 142/359 (39%), Gaps = 13/359 (3%)
Query: 126 PYATPKQVSEIIELLRSGDSETESKLLSMSVSLSNASVIEILRVLNSEKVSALCFLKYMR 185
P AT +VS IIE L + + V S I VL + + L F ++
Sbjct: 31 PIATSIEVSTIIETLDPMED-------GLKVISSRIRSYTITSVLQEQPDTRLGFRLFIW 83
Query: 186 EIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKAL 245
+ + + L+I + + +E ++L + + ++ +AF L S +
Sbjct: 84 SLKSWHLRCRTVQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGM 143
Query: 246 TKKGI-----WRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYN 300
+K + R + + L+ E F +L L + + V Y
Sbjct: 144 DEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAF-LLALAVYNQMLKCNLNPDVVTYG 202
Query: 301 ILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGR 360
ILI +C+ C + L EM G P + Y+ VL LC+ + DA L +M
Sbjct: 203 ILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRAS 262
Query: 361 NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
C+ D ITY + + C+ G D AF + K G + + I G F RYE+A
Sbjct: 263 GCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEA 322
Query: 421 YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
+ + + MLY+++ + A +L EM + GLRP+ Y ++K
Sbjct: 323 HMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIK 381
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 94/231 (40%), Gaps = 37/231 (16%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE--- 355
Y+I++ +C+ + L +MR GC +TYN +L CK+G DA LL+
Sbjct: 236 YSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLT 295
Query: 356 --------------------------------EMLGRNCHPDAITYEIFIVYSCRVGKFD 383
+ML N PD + Y I I + G+
Sbjct: 296 KDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVT 355
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKS-SSNMLYSLL 442
A +M +RGL+P + A IKG F Y D + + L K+ +N YS+L
Sbjct: 356 EALTLLGEMTERGLRPDTICYNALIKG-FCDMGYLDEAESLRLEISKHDCFPNNHTYSIL 414
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
KN A+++ EM K G P+V + ++ L +++ A+ L
Sbjct: 415 ICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLL 465
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 90/215 (41%), Gaps = 33/215 (15%)
Query: 220 DFNVYQVCLN--------EKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGV-R 270
D Y V LN + AF L + LTK G +L +G CL++G+ R
Sbjct: 267 DLITYNVLLNGFCKSGYLDDAFTLL------QLLTKDG-----HILGVIGYGCLINGLFR 315
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
A YE A +K R+ V Y I+I+ + + LL EM +
Sbjct: 316 A--------RRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTER 367
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P T+ YN ++ C G +A L E+ +C P+ TY I I C+ G + A
Sbjct: 368 GLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKA 427
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
+ F +M K G P + T + I G R E+A
Sbjct: 428 QHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEA 462
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ YNILI C+ + G L EM+ G P ++TY ++ L + G++ DA E+ E
Sbjct: 526 IRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFE 585
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK--RGLQ 398
+M+ + C P++ TY+ + +SCR +A + + + ++ RG +
Sbjct: 586 QMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWE 630
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 112/265 (42%), Gaps = 30/265 (11%)
Query: 240 ISSKALTKKGIWRVVEVLNQVGGSCLVSGVR-------ALIEMFSVLGLYEMAKYVIKKT 292
I + L+++G RV E L +G G+R ALI+ F +G + A+ + +
Sbjct: 343 IMIRGLSQEG--RVTEALTLLG-EMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEI 399
Query: 293 ERKVSY-----YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQD 347
+ + Y+ILI MC+ + + EM ++GC P +T+N ++ LCK +
Sbjct: 400 SKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRL 459
Query: 348 ADACELLEEM-------------LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
+A L +M G + D + ++ + C G A+ Q+V
Sbjct: 460 EEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVD 519
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPV 453
G+ P + T+ I G+ F A+K + + + S +L+ L+ N
Sbjct: 520 SGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNED 579
Query: 454 MAKNVLSEMMKNGLRPNVSVYRRVL 478
A + +M+K G P S Y+ ++
Sbjct: 580 -ALEIFEQMVKKGCVPESSTYKTIM 603
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 86/204 (42%), Gaps = 18/204 (8%)
Query: 280 GLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQV--------- 325
GL A+++ K+ E+ V +N LI +C+ + R L +M V
Sbjct: 422 GLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRL 481
Query: 326 --GCEPI--TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
G + + + ++ LC++G A +LL +++ PD TY I I C+ G
Sbjct: 482 SQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGN 541
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
+ AF F +M +G P T+ I G + R EDA + K + Y
Sbjct: 542 INGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKT 601
Query: 442 LASLHDKNNNPVMAKNVLSEMMKN 465
+ + + NN +A +V + +++
Sbjct: 602 IMTWSCRENNISLALSVWMKYLRD 625
>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
Length = 899
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 82/185 (44%), Gaps = 11/185 (5%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +LIK +C+ G R +L EM G P TYN ++ CK+G+ DA + M
Sbjct: 198 YTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALME 257
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C+PD TY I I C K D A N + RG P + T I GY R +
Sbjct: 258 RNGCNPDDWTYNILIYGLCG-EKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERID 316
Query: 419 DAYKYVVLSADKYKSSSN-----MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
DA L SSN Y +L ++ K AK +SEM NGL PNV +
Sbjct: 317 DA-----LRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVI 371
Query: 474 YRRVL 478
Y ++
Sbjct: 372 YTSII 376
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 38/223 (17%)
Query: 203 DNCGRLDDYETMRQ--LLNDFNVYQVCLN--------EKAFGFLPVLISSKALTKKGIWR 252
DN RL +E M Q L D Y V + E+A+ FL +KG+
Sbjct: 456 DNAFRL--FEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFL---------VRKGV-- 502
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTE----RKVSY-YNILIKEMC 307
VL +V + LV G FS G + A +I+K + SY Y++L++ +C
Sbjct: 503 ---VLTKVTYTSLVDG-------FSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALC 552
Query: 308 RRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAI 367
++ +L +M G + + Y ++ + K G+ A + EM+ P A
Sbjct: 553 KQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAT 612
Query: 368 TYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
TY +FI C++G+ + A + +M + G+ P + T+ FI G
Sbjct: 613 TYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFING 655
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 73/180 (40%), Gaps = 19/180 (10%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y I+I EM + + + EM G +P TY + CK GQ +A L+ EM
Sbjct: 579 YTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEME 638
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD +TY +FI +G D AF+ +M+ +P T+ +K +F+
Sbjct: 639 RDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLK-HFLKMSLV 697
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA+ Y +S M + +L M+K+GL P Y ++
Sbjct: 698 DAH---------YVDTSGMWNWIELD---------TVWQLLERMVKHGLNPTAVTYSSII 739
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 85/223 (38%), Gaps = 48/223 (21%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +LI + ++C FK ++ + EM G P + Y ++ CK G+ A E+ M
Sbjct: 337 YGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLME 396
Query: 359 GRNCHPDA-----------------------------------ITYEIFIVYSCRVGKFD 383
C P+A ITY I C+ +FD
Sbjct: 397 HEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFD 456
Query: 384 VAFNFFNQMVKRGLQP-----RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML 438
AF F M + GL P + THA G R E+AY ++V K + +
Sbjct: 457 NAFRLFEMMEQNGLTPDEQAYNVLTHALCKSG-----RAEEAYSFLV---RKGVVLTKVT 508
Query: 439 YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y+ L K N A ++ +M+ G + + Y +L+ L
Sbjct: 509 YTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQAL 551
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 15/149 (10%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
LL M + G P +TY+ ++ CK + +AC L + M G++ P+ Y + I C
Sbjct: 719 LLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCC 778
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ F A +F M++ G QP L ++ I G D Y DK KS
Sbjct: 779 DIKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGLC------DEGDY-----DKAKS---- 823
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNG 466
L+ L + D N+N V K + ++K G
Sbjct: 824 LFCDLLGMEDYNHNEVAWKILNDGLLKAG 852
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 71/164 (43%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L+ +M GC+ + TY+ +L LCK + +A +L++M + + Y I I
Sbjct: 528 LIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMI 587
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ GK D A + FN+M+ G +P T+ FI Y + E+A + + +
Sbjct: 588 KEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVV 647
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y++ + A + L M+ PN Y +LKH
Sbjct: 648 TYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHF 691
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 81/190 (42%), Gaps = 5/190 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNILI +C + +LL + G P +T+ ++ CK + DA + ML
Sbjct: 268 YNILIYGLCGEKPDEA-EELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSML 326
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
NC D Y + I + +F A ++M GL P + + + I GY +
Sbjct: 327 SSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVG 386
Query: 419 DAYKYVVLSADKYKSSSNMLYSLL--ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
A + L + + YS L + D+ + MA ++++M ++G+ P V Y
Sbjct: 387 AALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMA--LITKMQEDGITPGVITYTT 444
Query: 477 VLKHLHTSHQ 486
+++ H+
Sbjct: 445 LIQGQCKKHE 454
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 1/161 (0%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
LL+ M +GC +Y ++ LC+ +A LL M+ C + TY + I C
Sbjct: 147 LLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLC 206
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ G+ A +M RG+ P + T+ A I GY R +DA L + +
Sbjct: 207 KEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDW 266
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
Y++L P A+ +L++ + G P V + ++
Sbjct: 267 TYNILI-YGLCGEKPDEAEELLNDAIVRGFTPTVITFTNII 306
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 2/225 (0%)
Query: 257 LNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPR 316
+NQV L++G+ + E + L M + + T V YN +I +C+
Sbjct: 235 MNQVSYGTLLNGLCKIGETRCAIKLLRMIED--RSTRPDVVMYNTIIDGLCKDKLVNEAY 292
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
D EM G P +TY+ ++ C GQ A LL EM +N +PD TY I I
Sbjct: 293 DFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDAL 352
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
C+ GK A N M K G++P + T++ + GY + +A + + S
Sbjct: 353 CKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSV 412
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y+++ + K + A N+L EM+ + PN Y ++ L
Sbjct: 413 CSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGL 457
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 84/180 (46%), Gaps = 9/180 (5%)
Query: 244 ALTKKGIW-RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNIL 302
+TK+G+ VV + G CLV V ++F + V + V YNI+
Sbjct: 367 VMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAM--------VQTEVNPSVCSYNIM 418
Query: 303 IKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNC 362
I +C+ +LL EM P T+TYN ++ LCK+G+ A +L++E+ R
Sbjct: 419 INGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQ 478
Query: 363 HPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
D ITY + C+ D A F +M +RG+QP T+ A I G R ++A K
Sbjct: 479 PADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQK 538
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 87/190 (45%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
L+K +C + + K ++ G + ++Y +L LCK G+ A +LL + R+
Sbjct: 208 LMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRS 267
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
PD + Y I C+ + A++F+ +M RG+ P + T++ I G+ + + A+
Sbjct: 268 TRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAF 327
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ K + Y++L K AKN+L M K G++PNV Y ++
Sbjct: 328 SLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGY 387
Query: 482 HTSHQEHMAK 491
+ H AK
Sbjct: 388 CLVGEVHNAK 397
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 4/113 (3%)
Query: 289 IKKTERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKN 344
+K ER + Y LI +C+ K + L + GC TYN ++G LCK
Sbjct: 506 MKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKE 565
Query: 345 GQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
G +A + +M C PDA+T+EI I + D A ++M+ +GL
Sbjct: 566 GMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 618
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 67/158 (42%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M G EP +T + ++ C GQ A + +L ++L P+ I + C G
Sbjct: 157 QMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKG 216
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+ + +F +++V +G Q ++ + G A K + + D+ ++Y+
Sbjct: 217 EVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYN 276
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ K+ A + +EM G+ P+V Y ++
Sbjct: 277 TIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLI 314
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 9/215 (4%)
Query: 269 VRALIEMFSVLGLYEMAKYV-IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGC 327
+R + + V +EM + + +K E V YNIL++ + + ++ L+ +M C
Sbjct: 270 IRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
+P +TY+ ++ LC++G+ +A LL+ M + PDA +Y+ I CR G+ DVA
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389
Query: 388 FFNQMVKRGLQPRLATH----AAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
F M+ G P + + A K E K + SS N ++S L
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
S DK + A +++ EMM NG+ P+ Y ++
Sbjct: 450 SSGDK----IRALHMILEMMSNGIDPDEITYNSMI 480
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 99/228 (43%), Gaps = 6/228 (2%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEM 306
RV+E+L + G V ALI F + + A V+ + K YNI+I +
Sbjct: 145 RVMEILEKFGQPD-VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSL 203
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
C R +L ++ C+P +TY ++ G +A +L++EML R PD
Sbjct: 204 CSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDM 263
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
TY I C+ G D AF + +G +P + ++ ++ ++E+ K +
Sbjct: 264 FTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTK 323
Query: 427 SADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + + YS+L + ++ A N+L M + GL P+ Y
Sbjct: 324 MFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSY 371
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 87/187 (46%), Gaps = 2/187 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I+ MC+ +++ + GCEP ++YN +L L G+ + +L+ +M
Sbjct: 266 YNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMF 325
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C P+ +TY I I CR GK + A N M ++GL P ++ I + R +
Sbjct: 326 SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD 385
Query: 419 DAYKYV-VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
A +++ + +D ++LA+L KN A + ++ + G PN S Y +
Sbjct: 386 VAIEFLETMISDGCLPDIVNYNTVLATLC-KNGKADQALEIFGKLGEVGCSPNSSSYNTM 444
Query: 478 LKHLHTS 484
L +S
Sbjct: 445 FSALWSS 451
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 1/123 (0%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
S YN + + D +++EM G +P +TYN ++ LC+ G +A ELL +
Sbjct: 439 SSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVD 498
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY-FIFY 415
M HP +TY I ++ C+ + + A N MV G +P T+ I+G F Y
Sbjct: 499 MRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGY 558
Query: 416 RYE 418
R E
Sbjct: 559 RAE 561
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 93/233 (39%), Gaps = 35/233 (15%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
M K +K + V Y+ILI +CR + +LL M++ G P +Y+ ++ C+
Sbjct: 321 MTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCR 380
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN------------- 390
G+ A E LE M+ C PD + Y + C+ GK D A F
Sbjct: 381 EGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSS 440
Query: 391 ----------------------QMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSA 428
+M+ G+ P T+ + I ++A++ +V
Sbjct: 441 YNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMR 500
Query: 429 DKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
S + Y+++ K + A NVL M+ NG RPN + Y +++ +
Sbjct: 501 SCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 75/186 (40%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y ILI+ L+ EM G +P TYN ++ +CK G A E++
Sbjct: 228 VITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVR 287
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ + C PD I+Y I + GK++ +M P + T++ I
Sbjct: 288 NLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDG 347
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ E+A + L +K + Y L + + +A L M+ +G P++ Y
Sbjct: 348 KIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYN 407
Query: 476 RVLKHL 481
VL L
Sbjct: 408 TVLATL 413
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 10/225 (4%)
Query: 269 VRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCE 328
+R+L++ + + + ++ K +S +NI I +CR + + MR+ G
Sbjct: 23 LRSLLKSGKIEKAHRFVEQLLVKGLCDISTFNIYISGLCRASRIGDAQTVFDGMRKHGFW 82
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P +TYN +L LC G+ +DA L E M+ PD +TY + C+VGK D A
Sbjct: 83 PNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKI 142
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
F+ VKRG P + T+ A I G+ + ++A + + + + Y+ L + K
Sbjct: 143 FDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCK 202
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYR-------RVLKHLHTSHQ 486
N A+ ++ + G PNV Y R L+ L ++ Q
Sbjct: 203 NGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRRLESARQ 244
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 133/302 (44%), Gaps = 31/302 (10%)
Query: 199 SLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWR---VVE 255
+L+ C L E+ RQLL ++ LN G P ++S AL G+ R V E
Sbjct: 227 TLISGLCRELRRLESARQLLE-----KMVLN----GCKPDIVSYNALIH-GLAREQGVSE 276
Query: 256 VLNQVGGSCLVSGVRALIEMFSVL--GL---------YEMAKYVIKKT-ERKVSYYNILI 303
L ++ GS L G + +++L GL +E+ ++K E Y + I
Sbjct: 277 AL-KLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFI 335
Query: 304 KEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH 363
+C+ + +L +M + GC P +++N V+ LCK + +A LL M + C
Sbjct: 336 DGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCS 395
Query: 364 PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY 423
P+AI++ I CR GK+ A F +M+KRG++P + T+ + G R E K
Sbjct: 396 PNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDG-LCKARQEGRIKE 454
Query: 424 VVLSAD----KYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
+ D K + + YS L K A+ +L M G PNV Y ++
Sbjct: 455 AITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLIS 514
Query: 480 HL 481
L
Sbjct: 515 GL 516
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 7/232 (3%)
Query: 263 SCLVSGV-RALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
S L+SG+ R L + S L E K V+ + + YN LI + R L
Sbjct: 226 STLISGLCRELRRLESARQLLE--KMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGS 283
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
+ + G EP TYN ++ L K + +A EL ++ PDAITY +FI C+ G+
Sbjct: 284 VLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGR 343
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYK--SSSNMLY 439
+ A M ++G P + +H A I G R ++A V+LS + K S + + +
Sbjct: 344 VEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAE--VLLSGMEAKGCSPNAISF 401
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
+ L + A EM+K G++P V Y ++ L + QE K
Sbjct: 402 NTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIK 453
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 3/186 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA---DACELLE 355
+N LI CR +K EM + G +P +TYN ++ LCK Q+ +A L +
Sbjct: 401 FNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFD 460
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+ + PD +TY I + GK D A M +G P + T+ + I G
Sbjct: 461 AMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLD 520
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ ++A + V +K + Y + S K A + ++ G+ P +Y
Sbjct: 521 KVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYF 580
Query: 476 RVLKHL 481
++ L
Sbjct: 581 SLIDGL 586
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 56/127 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ LI + + R LL M GC P TYN ++ LC + +A EL
Sbjct: 471 VVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFV 530
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+ + C PD ITY I C+ D A F+ ++ G+ P + + I G
Sbjct: 531 AMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVA 590
Query: 416 RYEDAYK 422
R ++A K
Sbjct: 591 RVDEALK 597
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 96/203 (47%), Gaps = 9/203 (4%)
Query: 210 DYETMRQLLNDFNVYQVCLNE-KAFGFLPVLISSK-ALTKKGIWRVVEVLNQVGGSCLVS 267
D T R + D +Y + ++ + G + ++ K A+ KKGI V N CL++
Sbjct: 358 DGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYN-----CLIT 412
Query: 268 GVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGC 327
G + S GL + K K E V YN+LI +C + + + LL EM +VG
Sbjct: 413 GFSRSGDWRSASGLLDEMKE--KGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGL 470
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
EP LTYN ++ C G A E+ M + +TY +FI Y C++GK D A +
Sbjct: 471 EPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEAND 530
Query: 388 FFNQMVKRGLQPRLATHAAFIKG 410
N+M+ + L P T+ +G
Sbjct: 531 LLNEMLDKCLVPNGITYETIKEG 553
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 94/220 (42%), Gaps = 8/220 (3%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+ G C S A + +F EM + I + V YN LI +C + L+
Sbjct: 271 INGYCKNSNTAAAVRVFE-----EMKQQGIAAS---VVTYNSLISGLCSEGKVEEGVKLM 322
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
EM +G P +T+ VL CK G ADA + ++ M RN PD + Y I I R+
Sbjct: 323 EEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRL 382
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
GK + A M K+G+ P + T+ I G+ + A + +K + + Y
Sbjct: 383 GKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTY 442
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
++L A +L EM + GL PN Y +++
Sbjct: 443 NVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQ 482
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 88/201 (43%), Gaps = 3/201 (1%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L EM + I T + +LI C+ + + EM+Q G +TYN ++
Sbjct: 252 LKEMVEAGISPT---AVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISG 308
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
LC G+ + +L+EEM P+ IT+ + C+ G A ++ + M +R ++P
Sbjct: 309 LCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPD 368
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
+ + I Y + EDA A K S + Y+ L + ++ + A +L
Sbjct: 369 VVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLD 428
Query: 461 EMMKNGLRPNVSVYRRVLKHL 481
EM + G+ +V Y ++ L
Sbjct: 429 EMKEKGIEADVVTYNVLIGAL 449
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 9/185 (4%)
Query: 296 VSYYNILIKEMCRRCDFKGPRD------LLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
V+ YN LI C++ G + LL EM + G P +T+ ++ CKN A
Sbjct: 226 VATYNSLIDGYCKK---GGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAA 282
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A + EEM + +TY I C GK + +M GL P T +K
Sbjct: 283 AVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLK 342
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
G+ DA ++ ++ ++Y++L ++ + A V M K G+ P
Sbjct: 343 GFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISP 402
Query: 470 NVSVY 474
NV+ Y
Sbjct: 403 NVTTY 407
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 125/299 (41%), Gaps = 12/299 (4%)
Query: 209 DDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQ-VGGSCL-- 265
+ ++ +LL++ L++ F L L RV+E+L Q + C+
Sbjct: 335 ERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVD----RVIELLEQMLSHGCMPD 390
Query: 266 VSGVRALIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNILIKEMCRRCDFKGPRDLLV 320
V +I F GL + A ++K + Y I++K +C + +L+
Sbjct: 391 VITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMS 450
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M Q GC P +T+N ++ LCK G A ELL++ML C PD I+Y I + G
Sbjct: 451 QMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAG 510
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
K + A N MV +G+ P +++ R + D S +LY+
Sbjct: 511 KTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYN 570
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSS 499
+ S K A + + M+ NG PN S Y ++K L + A+ L S S
Sbjct: 571 AVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCS 629
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 5/232 (2%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKK-----TERKVSYYNILIKEM 306
RV+E ++ G + ++ G + A +++K E + YN ++K +
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
C + +L+ EM +V C P +T+N ++G LC+NG E+L +M C PD
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
Y I C+ G +VA N+M GL+P + + +KG R+++A + +
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346
Query: 427 SADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
K ++ +++L +N +L +M+ +G P+V Y V+
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVI 398
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 90/207 (43%), Gaps = 5/207 (2%)
Query: 280 GLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
GL+E V+ + + Y +I +C+ + ++L M G +P + Y
Sbjct: 265 GLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCY 324
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N VL LC + +A ELL EM ++C D +T+ I + + C+ G D QM+
Sbjct: 325 NTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLS 384
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM 454
G P + T+ I G+ ++A + + + + Y+++ V
Sbjct: 385 HGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVD 444
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A+ ++S+M++ G PN + ++ L
Sbjct: 445 AEELMSQMIQQGCPPNPVTFNTLINFL 471
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 87/199 (43%), Gaps = 2/199 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+++++ CR F+ +L M GC T N VL +C+ G +A LL ++
Sbjct: 149 YHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLA 208
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C D ++Y + C ++ ++MV+ P + T I GY
Sbjct: 209 FFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLI-GYLCRNGLF 267
Query: 419 DAYKYVVLSADKYKSSSNM-LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ V+ ++ + ++ +Y+ + K + +A +L+ M GL+PNV Y V
Sbjct: 268 ERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTV 327
Query: 478 LKHLHTSHQEHMAKCLSSR 496
LK L ++ + A+ L S
Sbjct: 328 LKGLCSAERWKEAEELLSE 346
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 88/205 (42%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
+++ +C R ++L EM GC PI Y+ +L C++G ++ +LE M +
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG 176
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
C D + + C G D A ++ G + + ++ A +KG + R+ D
Sbjct: 177 CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE 236
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + + + + ++ L +N VL++M ++G P++ +Y ++ +
Sbjct: 237 ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGI 296
Query: 482 HTSHQEHMAKCLSSRYSSLSLGSSV 506
+A + +R S L +V
Sbjct: 297 CKEGHLEVANEILNRMPSYGLKPNV 321
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 125/299 (41%), Gaps = 12/299 (4%)
Query: 209 DDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQ-VGGSCL-- 265
+ ++ +LL++ L++ F L L RV+E+L Q + C+
Sbjct: 335 ERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVD----RVIELLEQMLSHGCMPD 390
Query: 266 VSGVRALIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNILIKEMCRRCDFKGPRDLLV 320
V +I F GL + A ++K + Y I++K +C + +L+
Sbjct: 391 VITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMS 450
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M Q GC P +T+N ++ LCK G A ELL++ML C PD I+Y I + G
Sbjct: 451 QMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAG 510
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
K + A N MV +G+ P +++ R + D S +LY+
Sbjct: 511 KTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYN 570
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSS 499
+ S K A + + M+ NG PN S Y ++K L + A+ L S S
Sbjct: 571 AVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCS 629
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 5/232 (2%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKK-----TERKVSYYNILIKEM 306
RV+E ++ G + ++ G + A +++K E + YN ++K +
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
C + +L+ EM +V C P +T+N ++G LC+NG E+L +M C PD
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
Y I C+ G +VA N+M GL+P + + +KG R+++A + +
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346
Query: 427 SADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
K ++ +++L +N +L +M+ +G P+V Y V+
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVI 398
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 90/207 (43%), Gaps = 5/207 (2%)
Query: 280 GLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
GL+E V+ + + Y +I +C+ + ++L M G +P + Y
Sbjct: 265 GLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCY 324
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N VL LC + +A ELL EM ++C D +T+ I + + C+ G D QM+
Sbjct: 325 NTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLS 384
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM 454
G P + T+ I G+ ++A + + + + Y+++ V
Sbjct: 385 HGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVD 444
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A+ ++S+M++ G PN + ++ L
Sbjct: 445 AEELMSQMIQQGCPPNPVTFNTLINFL 471
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 87/199 (43%), Gaps = 2/199 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+++++ CR F+ +L M GC T N VL +C+ G +A LL ++
Sbjct: 149 YHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLA 208
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C D ++Y + C ++ ++MV+ P + T I GY
Sbjct: 209 FFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLI-GYLCRNGLF 267
Query: 419 DAYKYVVLSADKYKSSSNM-LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ V+ ++ + ++ +Y+ + K + +A +L+ M GL+PNV Y V
Sbjct: 268 ERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTV 327
Query: 478 LKHLHTSHQEHMAKCLSSR 496
LK L ++ + A+ L S
Sbjct: 328 LKGLCSAERWKEAEELLSE 346
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 88/205 (42%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
+++ +C R ++L EM GC PI Y+ +L C++G ++ +LE M +
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG 176
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
C D + + C G D A ++ G + + ++ A +KG + R+ D
Sbjct: 177 CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE 236
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + + + + ++ L +N VL++M ++G P++ +Y ++ +
Sbjct: 237 ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGI 296
Query: 482 HTSHQEHMAKCLSSRYSSLSLGSSV 506
+A + +R S L +V
Sbjct: 297 CKEGHLEVANEILNRMPSYGLKPNV 321
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNI++ +C+ ++L+ EM G P +TY+ ++ LCK G+ AC+LLEEM
Sbjct: 342 YNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMS 401
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD+ T + + GK D A + M RG P L T+ + G R +
Sbjct: 402 KEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRID 461
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A ++ + Y+++ + ++ A + EM+K G+ P+ +Y +L
Sbjct: 462 EAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLL 521
Query: 479 KHLHTSHQEHMA 490
L + E +A
Sbjct: 522 DGLARNGLEDLA 533
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 53/101 (52%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +N L+K +C L M + GCEP ++Y+ +L LCK G+ +AC L E
Sbjct: 144 VVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWE 203
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
EM+ ++C PD + Y F+ C+ + A + +MV +G
Sbjct: 204 EMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKG 244
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 69/150 (46%), Gaps = 3/150 (2%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
+AK V K V Y I+I +CR G + EM + G P T+ Y+ +L L +
Sbjct: 467 LAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLAR 526
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
NG + A ELL+ L C PD + +++ + C+ GK + A +M G T
Sbjct: 527 NGLEDLALELLKTSL---CKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFT 583
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKS 433
+ + + G + + A + V +++ + S
Sbjct: 584 YISVVSGLRKLGKVDKARQLVDDASETHTS 613
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 1/169 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVG-CEPITLTYNYVLGVLCKNGQDADACELL 354
V Y+++I C+ ++ M G C P +T+N +L LC + ++A L
Sbjct: 108 VITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLF 167
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
E M C P+ I+Y + C+ G+ D A + +MV++ P L + +F+ G
Sbjct: 168 EYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKA 227
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
R +A K + + +S + + K + A+N + E +
Sbjct: 228 NRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHL 276
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 68/162 (41%), Gaps = 5/162 (3%)
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
RQ G + TYN L L K A E ++M R PD TY I + C+ G+
Sbjct: 30 RQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGEL 89
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY--S 440
D A Q+ + G++ + T++ I G R +DA + + +++ S
Sbjct: 90 DKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNS 149
Query: 441 LLASLHDKNNNPVMAKNVLSE-MMKNGLRPNVSVYRRVLKHL 481
LL L + + VL E M K G PNV Y +L L
Sbjct: 150 LLKGLC--SGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGL 189
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 87/223 (39%), Gaps = 14/223 (6%)
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDF 312
V EVL +G + ++ +F LG K + V YN + + +
Sbjct: 8 VGEVLRHLGK------ISTIVRLFDWLGRQ-------KGYQHSVFTYNCFLDALAKANAG 54
Query: 313 KGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIF 372
+ + +M++ G P TY+ VL LCK G+ A ELL ++ + ITY +
Sbjct: 55 QLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVV 114
Query: 373 IVYSCRVGKFDVAFNFFNQMVK-RGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKY 431
I C+ + D A F M G P + T + +KG R +A+ A
Sbjct: 115 IDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAG 174
Query: 432 KSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + YS L K A + EM++ P++ Y
Sbjct: 175 CEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAY 217
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 94/258 (36%), Gaps = 47/258 (18%)
Query: 261 GGSC---------LVSGVRALIEMFSVLGLYE-MAKYVIKKTERKVSYYNILIKEMCRRC 310
GG C L+ G+ + M L+E MAK E V Y+ L+ +C+
Sbjct: 137 GGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAK---AGCEPNVISYSTLLDGLCKAG 193
Query: 311 DFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYE 370
L EM + C P + Y + LCK + A+AC+ +M+ + DA+ +
Sbjct: 194 RLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFS 253
Query: 371 I-----------------FIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI----- 408
I + CR G D A F +M+ R P I
Sbjct: 254 TVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCK 313
Query: 409 -----KGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
G +F R + ++ Y + Y+++ K A+ +++EM
Sbjct: 314 SKRLPDGVLLFQRMKSMKEF-------YCPPNLETYNIMVDNLCKAKQLDEAQELVNEMA 366
Query: 464 KNGLRPNVSVYRRVLKHL 481
GL P+V Y ++ L
Sbjct: 367 NYGLSPDVVTYSALVDGL 384
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 87/192 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ LI C++ + EMR+ G +P + YN ++ CK G+ A EL+ EM
Sbjct: 189 FTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREME 248
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD +TY I C+VG D AF +M+K+G+ P T+++ I+G R
Sbjct: 249 AKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLN 308
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA + Y+ L H K N A ++ EM++ G+ P+V Y ++
Sbjct: 309 DACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLI 368
Query: 479 KHLHTSHQEHMA 490
L S + A
Sbjct: 369 NGLSKSARTKEA 380
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 80/157 (50%), Gaps = 5/157 (3%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI + LG ++A+ +I++ E K V Y+ +I C+ + L +M +
Sbjct: 226 ALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKK 285
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P +TY+ ++ LC+ + DACEL E ML PD TY I C+ G + A
Sbjct: 286 GVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKA 345
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
+ ++M+++G+ P + T++ I G R ++A++
Sbjct: 346 LSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHR 382
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 62/118 (52%), Gaps = 3/118 (2%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YNIL++ +C R + ++ +MR GC P +TYN ++ C+ G+ D E +
Sbjct: 10 VYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE-LDGAERVV 68
Query: 356 EMLGR--NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
++ N P+ +T+ + C+ G+ + A F++MV+ GL P + ++ + GY
Sbjct: 69 SLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGY 126
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 82/180 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N ++ +C+ +G R + EM + G P ++YN +L CK G ++ + EM
Sbjct: 84 FNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMT 143
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R PD +T+ I +C+ G + A QM +RGL+ T A I G+ +
Sbjct: 144 QRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLD 203
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA V S + Y+ L + + K +A+ ++ EM ++P+V Y ++
Sbjct: 204 DALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTII 263
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 102/240 (42%), Gaps = 8/240 (3%)
Query: 249 GIWRVVEVLNQVGGS--CLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNI 301
G RVV ++ + G + LV+ +++ G E A+ V + R+ V YN
Sbjct: 63 GAERVVSLMREEGNAKPNLVT-FNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNT 121
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
L+ C+ + EM Q G P +T+ ++ CK G A L+ +M R
Sbjct: 122 LLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 181
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
+ +T+ I C+ G D A +M K G+QP + + A I GY R + A
Sbjct: 182 LRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAR 241
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + K + YS + S + K N A + +M+K G+ P+ Y +++ L
Sbjct: 242 ELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGL 301
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 1/154 (0%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M + G P TYN ++ LC G+ +A ++ +M G C P+A+TY + CR G+
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 382 FDVAFNFFNQMVKRG-LQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
D A + M + G +P L T + + G R E A K + + + Y+
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
L S + K + V SEM + GL P+V +
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTF 154
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 12/135 (8%)
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
C G +A ++ + ML RN D Y I I CR G A +F QM++ G P
Sbjct: 422 CMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNS 481
Query: 402 ATHAAFIKGYF---IFYRYEDAYKYVVLS---ADKYKSSSNMLYSLLASLHDKNNNPVMA 455
+ + ++G F + ++A + ++ AD S + L L+ K N
Sbjct: 482 TSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKA------LIDLNRKEGNVDAL 535
Query: 456 KNVLSEMMKNGLRPN 470
+VL M ++GL P+
Sbjct: 536 IDVLCGMARDGLLPS 550
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 85/186 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ LI C++ + EMR+ G +P + YN ++ CK G+ A EL+ EM
Sbjct: 331 FTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREME 390
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD +TY I C+VG D AF +M+K+G+ P T+++ I+G R
Sbjct: 391 AKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLN 450
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA + Y+ L H K N A ++ EM++ G+ P+V Y ++
Sbjct: 451 DACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLI 510
Query: 479 KHLHTS 484
L S
Sbjct: 511 NGLSKS 516
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 86/175 (49%), Gaps = 5/175 (2%)
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMC 307
VE + + G V ALI + LG ++A+ +I++ E K V Y+ +I C
Sbjct: 350 AVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYC 409
Query: 308 RRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAI 367
+ + L +M + G P +TY+ ++ LC+ + DACEL E ML PD
Sbjct: 410 KVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEF 469
Query: 368 TYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
TY I C+ G + A + ++M+++G+ P + T++ I G R ++A++
Sbjct: 470 TYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHR 524
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 62/118 (52%), Gaps = 3/118 (2%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YNIL++ +C R + ++ +MR GC P +TYN ++ C+ G+ D E +
Sbjct: 152 VYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE-LDGAERVV 210
Query: 356 EMLGR--NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
++ N P+ +T+ + C+ G+ + A F++MV+ GL P + ++ + GY
Sbjct: 211 SLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGY 268
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 108/251 (43%), Gaps = 14/251 (5%)
Query: 240 ISSKALTKKGIWRVVEVLNQVG----GSCLVSGV--RALIEMFSVLGLYEMAKYVIK--- 290
I +AL +G R+ E + VG C + V L+ F G + A+ V+
Sbjct: 157 ILVRALCARG--RLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMR 214
Query: 291 ---KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQD 347
+ + +N ++ +C+ +G R + EM + G P ++YN +L CK G
Sbjct: 215 EEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCL 274
Query: 348 ADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAF 407
++ + EM R PD +T+ I +C+ G + A QM +RGL+ T A
Sbjct: 275 HESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTAL 334
Query: 408 IKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
I G+ +DA V S + Y+ L + + K +A+ ++ EM +
Sbjct: 335 IDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRV 394
Query: 468 RPNVSVYRRVL 478
+P+V Y ++
Sbjct: 395 KPDVVTYSTII 405
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 102/240 (42%), Gaps = 8/240 (3%)
Query: 249 GIWRVVEVLNQVGGS--CLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNI 301
G RVV ++ + G + LV+ +++ G E A+ V + R+ V YN
Sbjct: 205 GAERVVSLMREEGNAKPNLVT-FNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNT 263
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
L+ C+ + EM Q G P +T+ ++ CK G A L+ +M R
Sbjct: 264 LLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 323
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
+ +T+ I C+ G D A +M K G+QP + + A I GY R + A
Sbjct: 324 LRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAR 383
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + K + YS + S + K N A + +M+K G+ P+ Y +++ L
Sbjct: 384 ELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGL 443
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 1/160 (0%)
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
R L M + G P TYN ++ LC G+ +A ++ +M G C P+A+TY +
Sbjct: 137 RRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAA 196
Query: 376 SCRVGKFDVAFNFFNQMVKRG-LQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSS 434
CR G+ D A + M + G +P L T + + G R E A K + +
Sbjct: 197 FCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAP 256
Query: 435 SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ Y+ L S + K + V SEM + GL P+V +
Sbjct: 257 DVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTF 296
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 33/72 (45%)
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
C G +A ++ + ML RN D Y I I CR G A +F QM++ G P
Sbjct: 563 FCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPN 622
Query: 401 LATHAAFIKGYF 412
+ + ++G F
Sbjct: 623 STSTISLVRGLF 634
>gi|115475535|ref|NP_001061364.1| Os08g0248400 [Oryza sativa Japonica Group]
gi|113623333|dbj|BAF23278.1| Os08g0248400, partial [Oryza sativa Japonica Group]
Length = 440
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 83/182 (45%), Gaps = 2/182 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVG--CEPITLTYNYVLGVLCKNGQDADACELLEE 356
YNIL+K +C + +LL M G C P ++Y+ ++ L K G A E
Sbjct: 172 YNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKEGDSDKAYSTYHE 231
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
ML R PD +TY + C+ D A + N+MVK G+ P T+ + + GY +
Sbjct: 232 MLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQ 291
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
++A + + Y+ L KN + A+ +L M+K GL+PNV Y
Sbjct: 292 SKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYST 351
Query: 477 VL 478
+L
Sbjct: 352 LL 353
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 87/186 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN ++ +C+ D+L M + G P +TYN ++ C +GQ +A +LE
Sbjct: 241 VVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILE 300
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M PDA+TY + Y C+ G+ A + M+KRGL+P + T++ + GY
Sbjct: 301 KMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHGYATKG 360
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ + L ++S+L K+ N +A V S+M + L P+V Y
Sbjct: 361 ALVEMRDLLDLMVRNGIQPDRHVFSILICACTKHQNVDVAMFVFSKMRQQRLTPDVVTYG 420
Query: 476 RVLKHL 481
++ L
Sbjct: 421 TLIDGL 426
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 39/207 (18%)
Query: 288 VIKKTER-KVSYYNILIKEMCRRCDFKGPRDLLVE-MRQVGCEPITLTYNYVLGVLCKNG 345
VIKK R + + L+K +C ++++ M ++GC P +YN +L LC
Sbjct: 124 VIKKGYRVEPIIFTPLLKSLCAEKRTSNAMNIVLRRMTELGCAPHVFSYNILLKGLCHES 183
Query: 346 QDADACELLEEML--GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
+ +A ELL M G +C PD ++Y I + G D A++ +++M++RG+ P + T
Sbjct: 184 RSQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVT 243
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
Y +V + K A DK A +VL+ M+
Sbjct: 244 -----------------YNTIVAALCK------------AQAMDK------AMDVLNRMV 268
Query: 464 KNGLRPNVSVYRRVLKHLHTSHQEHMA 490
KNG+ P+ Y ++ +S Q A
Sbjct: 269 KNGVMPDCITYNSIVHGYCSSGQSKEA 295
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 2/142 (1%)
Query: 279 LGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
+G+ E K E Y L+ +C+ R +L M + G +P +TY+ +L
Sbjct: 296 IGILE--KMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLL 353
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
G + +LL+ M+ PD + I I + DVA F++M ++ L
Sbjct: 354 HGYATKGALVEMRDLLDLMVRNGIQPDRHVFSILICACTKHQNVDVAMFVFSKMRQQRLT 413
Query: 399 PRLATHAAFIKGYFIFYRYEDA 420
P + T+ I G R +DA
Sbjct: 414 PDVVTYGTLIDGLCKSGRVDDA 435
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 91/201 (45%)
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
K E V YN +I +C+ +L EM G P +TY+ ++ LC G+ +DA
Sbjct: 865 KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDA 924
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
LL +M+ R +PD T+ I + GK A +++MVKR + P + T+++ I G
Sbjct: 925 SRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLING 984
Query: 411 YFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
+ + R ++A + K+ + Y+ L K V EM + GL N
Sbjct: 985 FCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 1044
Query: 471 VSVYRRVLKHLHTSHQEHMAK 491
Y +++ L + MA+
Sbjct: 1045 TVTYNILIQGLFQAGDCDMAQ 1065
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 93/185 (50%), Gaps = 4/185 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDL--LVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
+NI+I C C F+ L L +M ++G EP +T ++ C+ + +DA L+++
Sbjct: 226 FNIVINCFC--CCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 283
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
M+ PD + Y I C+ + + AF+FF ++ ++G++P + T+ A + G R
Sbjct: 284 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 343
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
+ DA + + K + + + YS L KN + AK + EM++ + P++ Y
Sbjct: 344 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 403
Query: 477 VLKHL 481
++ L
Sbjct: 404 LINGL 408
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 5/197 (2%)
Query: 290 KKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKN 344
K+ ERK V Y L+ +C + LL +M + P +TY+ +L KN
Sbjct: 317 KEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKN 376
Query: 345 GQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
G+ +A EL EEM+ + PD +TY I C + D A F+ MV +G + ++
Sbjct: 377 GKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSY 436
Query: 405 AAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMK 464
I G+ R ED K + + S+ + Y+ L + + A+ S+M
Sbjct: 437 NTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF 496
Query: 465 NGLRPNVSVYRRVLKHL 481
G+ P++ Y +L L
Sbjct: 497 FGISPDIWTYNILLGGL 513
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L+ M GC+P +TY V+ LCK G A LL +M P + Y I C
Sbjct: 822 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 881
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ D A N F +M +G++P + T+++ I + R+ DA + + ++ +
Sbjct: 882 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 941
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+S L K V A+ + EM+K + P++ Y
Sbjct: 942 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 978
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 55/112 (49%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI+ + D ++ +M G P TYN +LG LC NG+ A + E+M
Sbjct: 471 YNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQ 530
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
R D +TY I C+ GK + A++ F + +GL+P + T+ + G
Sbjct: 531 KREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSG 582
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 81/181 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I +C+ D E+ + G P +TY ++ LC + + +DA LL +M+
Sbjct: 296 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 355
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+ ITY + + GK A F +MV+ + P + T+++ I G + R +
Sbjct: 356 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRID 415
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + L K + + Y+ L + K + EM + GL N Y ++
Sbjct: 416 EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 475
Query: 479 K 479
+
Sbjct: 476 Q 476
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L+ +M G +P T+T+N ++ L + + ++A L++ M+ + C PD +TY + + C
Sbjct: 787 LVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLC 846
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ G D+AFN N+M + L+P + + I G + +DA K + +
Sbjct: 847 KRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVV 906
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
YS L S A +LS+M++ + P+V +
Sbjct: 907 TYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTF 943
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 79/187 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNILI+ + + D +++ EM G P +TYN +L LCKNG+ A + E +
Sbjct: 1048 YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 1107
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P TY I I C+ GK + ++ F + +G++P + + I G+ E
Sbjct: 1108 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 1167
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + ++ Y+ L ++ + + ++ EM G + S V
Sbjct: 1168 EADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVT 1227
Query: 479 KHLHTSH 485
LH
Sbjct: 1228 NMLHDGR 1234
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 1/204 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LIK C+ + ++ EM Q G T+TYN ++ L + G A E+ +
Sbjct: 1010 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 1069
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM+ P+ +TY + C+ GK + A F + + ++P + T+ I+G
Sbjct: 1070 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 1129
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ ED + + K + Y+ + S + + A + EM ++G PN Y
Sbjct: 1130 KVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYN 1189
Query: 476 RVLK-HLHTSHQEHMAKCLSSRYS 498
+++ L +E A+ + S
Sbjct: 1190 TLIRARLRDGDREASAELIKEMRS 1213
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 78/198 (39%), Gaps = 35/198 (17%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
++ + +K V ++ LI + L EM + +P +TY+ ++ C
Sbjct: 928 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 987
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
+ + +A ++ E M+ ++C PD +TY I C+ + + F +M +RGL T
Sbjct: 988 HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 1047
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
+ I+G F + + MA+ + EM+
Sbjct: 1048 YNILIQGLF-----------------------------------QAGDCDMAQEIFKEMV 1072
Query: 464 KNGLRPNVSVYRRVLKHL 481
+G+ PN+ Y +L L
Sbjct: 1073 SDGVPPNIMTYNTLLDGL 1090
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 72/174 (41%), Gaps = 2/174 (1%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M+ +G TY+ ++ C+ Q A +L +M+ P+ +T + C
Sbjct: 720 QMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSK 779
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+ A +QM G QP T I G F+ + +A + K + Y
Sbjct: 780 RISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYG 839
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLS 494
++ + K + +A N+L++M + L P V +Y ++ L +HM L+
Sbjct: 840 VVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL--CKYKHMDDALN 891
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 47/113 (41%)
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
K E + YNI+I+ MC+ + DL + G +P + YN ++ C+ G +A
Sbjct: 1110 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 1169
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
L +EM P++ Y I R G + + +M G +T
Sbjct: 1170 DALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 1222
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 64/179 (35%), Gaps = 45/179 (25%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M +G T+N V+ C Q + A +L +ML PD +T + CR
Sbjct: 213 KMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRN 272
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+ A + ++MV+ G +P + + A I R DA+ +
Sbjct: 273 RVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDF----------------- 315
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSS 499
E+ + G+RPNV Y ++ L C SSR+S
Sbjct: 316 ------------------FKEIERKGIRPNVVTYTALVNGL----------CNSSRWSD 346
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 66/154 (42%), Gaps = 2/154 (1%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P + ++ +L + K + L E+M + TY I I CR + +A
Sbjct: 693 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 752
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV-VLSADKYKSSSNMLYSLLASLHD 447
+M+K G +P + T ++ + GY R +A V + Y+ ++ +L+ L
Sbjct: 753 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLF- 811
Query: 448 KNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+N A ++ M+ G +P++ Y V+ L
Sbjct: 812 LHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGL 845
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 85/186 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ LI C++ + EMR+ G +P + YN ++ CK G+ A EL+ EM
Sbjct: 331 FTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREME 390
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD +TY I C+VG D AF +M+K+G+ P T+++ I+G R
Sbjct: 391 AKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLN 450
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA + Y+ L H K N A ++ EM++ G+ P+V Y ++
Sbjct: 451 DACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLI 510
Query: 479 KHLHTS 484
L S
Sbjct: 511 NGLSKS 516
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 80/157 (50%), Gaps = 5/157 (3%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI + LG ++A+ +I++ E K V Y+ +I C+ + L +M +
Sbjct: 368 ALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKK 427
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P +TY+ ++ LC+ + DACEL E ML PD TY I C+ G + A
Sbjct: 428 GVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKA 487
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
+ ++M+++G+ P + T++ I G R ++A++
Sbjct: 488 LSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHR 524
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 62/118 (52%), Gaps = 3/118 (2%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YNIL++ +C R + ++ +MR GC P +TYN ++ C+ G+ D E +
Sbjct: 152 VYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE-LDGAERVV 210
Query: 356 EMLGR--NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
++ N P+ +T+ + C+ G+ + A F++MV+ GL P + ++ + GY
Sbjct: 211 SLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGY 268
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 108/249 (43%), Gaps = 10/249 (4%)
Query: 240 ISSKALTKKG-IWRVVEVLNQV-GGSCLVSGV--RALIEMFSVLGLYEMAKYVIK----- 290
I +AL +G + V V+ + G C + V L+ F G + A+ V+
Sbjct: 157 ILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREE 216
Query: 291 -KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
+ + +N ++ +C+ +G R + EM + G P ++YN +L CK G +
Sbjct: 217 GNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHE 276
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
+ + EM R PD +T+ I +C+ G + A QM +RGL+ T A I
Sbjct: 277 SLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALID 336
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
G+ +DA V S + Y+ L + + K +A+ ++ EM ++P
Sbjct: 337 GFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKP 396
Query: 470 NVSVYRRVL 478
+V Y ++
Sbjct: 397 DVVTYSTII 405
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 102/240 (42%), Gaps = 8/240 (3%)
Query: 249 GIWRVVEVLNQVGGS--CLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNI 301
G RVV ++ + G + LV+ +++ G E A+ V + R+ V YN
Sbjct: 205 GAERVVSLMREEGNAKPNLVT-FNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNT 263
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
L+ C+ + EM Q G P +T+ ++ CK G A L+ +M R
Sbjct: 264 LLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 323
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
+ +T+ I C+ G D A +M K G+QP + + A I GY R + A
Sbjct: 324 LRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAR 383
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + K + YS + S + K N A + +M+K G+ P+ Y +++ L
Sbjct: 384 ELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGL 443
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 1/160 (0%)
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
R L M + G P TYN ++ LC G+ +A ++ +M G C P+A+TY +
Sbjct: 137 RRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAA 196
Query: 376 SCRVGKFDVAFNFFNQMVKRG-LQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSS 434
CR G+ D A + M + G +P L T + + G R E A K + +
Sbjct: 197 FCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAP 256
Query: 435 SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ Y+ L S + K + V SEM + GL P+V +
Sbjct: 257 DVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTF 296
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 12/135 (8%)
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
C G +A ++ + ML RN D Y I I CR G A +F QM++ G P
Sbjct: 564 CMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNS 623
Query: 402 ATHAAFIKGYF---IFYRYEDAYKYVVLS---ADKYKSSSNMLYSLLASLHDKNNNPVMA 455
+ + ++G F + ++A + ++ AD S + L L+ K N
Sbjct: 624 TSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKA------LIDLNRKEGNVDAL 677
Query: 456 KNVLSEMMKNGLRPN 470
+VL M ++GL P+
Sbjct: 678 IDVLCGMARDGLLPS 692
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 88/186 (47%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E + YN ++K +C + +L+VEM +VGC P T+N ++ LC+NG E
Sbjct: 210 EPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHE 269
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
L +M C PD Y I C+ G +VA + ++M GL+P + + +KG
Sbjct: 270 ALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLC 329
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
R+E+A + + ++ +++L +N +L +M+++G P+V
Sbjct: 330 SAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVI 389
Query: 473 VYRRVL 478
Y V+
Sbjct: 390 TYTTVI 395
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 122/297 (41%), Gaps = 12/297 (4%)
Query: 211 YETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGV- 269
+E LL + L++ F L L RV+E+L Q+ + V
Sbjct: 334 WEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVD----RVIELLEQMLEHGCIPDVI 389
Query: 270 --RALIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
+I F GL + A ++K + Y I++K +CR + ++L+ M
Sbjct: 390 TYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHM 449
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
Q GC P +T+N ++ +CK G A ELL++ML C PD I+Y I + GK
Sbjct: 450 IQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 509
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
+ A N M+ +G+ P +++ R + + D S LY+ +
Sbjct: 510 EEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAV 569
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSS 499
S K A + + M+ NG PN S Y +++ L + A+ L S S
Sbjct: 570 ISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCS 626
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 3/210 (1%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L M Y +K V YN ++K +C ++ DLL EM Q C +T+N ++
Sbjct: 306 LSRMPSYGLKP---NVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDF 362
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
C+NG ELLE+ML C PD ITY I C+ G D A M G +P
Sbjct: 363 FCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPN 422
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
++ +KG R+ DA + + + + + ++ L + K A +L
Sbjct: 423 TISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLK 482
Query: 461 EMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
+M+ NG P++ Y V+ L + + A
Sbjct: 483 QMLVNGCSPDLISYSTVIDGLGKAGKTEEA 512
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 81/192 (42%), Gaps = 35/192 (18%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N+++ +C + +LL ++ GCEP ++YN VL LC + D EL+ EM+
Sbjct: 182 NLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVR 241
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
C P+ T+ I Y CR G F+ +QM + G P L +A I G
Sbjct: 242 VGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGIC------- 294
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
K+ + +A ++LS M GL+PNV Y VLK
Sbjct: 295 ----------------------------KDGHHEVANDILSRMPSYGLKPNVVCYNTVLK 326
Query: 480 HLHTSHQEHMAK 491
L ++ + A+
Sbjct: 327 GLCSAERWEEAE 338
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 116/265 (43%), Gaps = 17/265 (6%)
Query: 232 AFGFLPVLISSKALTKKGI-----WRVVEVLN----QVGGSCLVSGVRALIEMFSVLGLY 282
+FG P ++S A+ K G+ W VE L +VG V+ LI GL+
Sbjct: 206 SFGCEPDIVSYNAVLK-GLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLF 264
Query: 283 EMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYV 337
E + + + Y +I +C+ + D+L M G +P + YN V
Sbjct: 265 EQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTV 324
Query: 338 LGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
L LC + +A +LL EM +C D +T+ I + + C+ G D QM++ G
Sbjct: 325 LKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGC 384
Query: 398 QPRLATHAAFIKGYFIFYRYEDAYKYVV-LSADKYKSSSNMLYSLLASLHDKNNNPVMAK 456
P + T+ I G+ ++A + +SA K ++ + Y+++ + V A+
Sbjct: 385 IPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNT-ISYTIVLKGLCRAERWVDAQ 443
Query: 457 NVLSEMMKNGLRPNVSVYRRVLKHL 481
++S M++ G PN + ++ +
Sbjct: 444 ELISHMIQQGCLPNPVTFNTLINFM 468
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/210 (19%), Positives = 85/210 (40%), Gaps = 1/210 (0%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
+Y+ I ++ +C R +L EM GC + +L C+ G A L+
Sbjct: 110 TYFPI-VRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQV 168
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
+ + C D+ + + C G D ++ G +P + ++ A +KG + R
Sbjct: 169 LHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKR 228
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
++D + +V + ++ L + +N LS+M ++G P++ +Y
Sbjct: 229 WDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYAT 288
Query: 477 VLKHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
++ + +A + SR S L +V
Sbjct: 289 IIDGICKDGHHEVANDILSRMPSYGLKPNV 318
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 87/195 (44%), Gaps = 3/195 (1%)
Query: 280 GLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
GL + + + + Y+ +I +C+ + D+ EM C P +TYN ++G
Sbjct: 198 GLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIG 254
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
C+ G +A LL +M+ C PD +TY + C++G+ D A+ F QMV L P
Sbjct: 255 GYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSP 314
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
+ T + + G R EDA + + + + Y+ + + K N A+ ++
Sbjct: 315 DVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELV 374
Query: 460 SEMMKNGLRPNVSVY 474
++ G PN Y
Sbjct: 375 ADFRSRGFVPNTVTY 389
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 96/217 (44%), Gaps = 5/217 (2%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
M + V + + Y LI C+ D +LL E+ + G P +TY+ V+ LCK
Sbjct: 167 MEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCK 226
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
G+ DA ++ EEM +C P AITY I CR G D A +MV P + T
Sbjct: 227 AGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVT 283
Query: 404 HAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM 462
+ + + R +DAY+ + + A+K SL+ L + A +L E+
Sbjct: 284 YTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRME-DALELLEEI 342
Query: 463 MKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSS 499
+ G P + Y V+ ++Q A+ L + + S
Sbjct: 343 TRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRS 379
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 81/177 (45%), Gaps = 5/177 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVE-MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
Y+ L+ +C+ C+ LVE M + GC P +TYN ++ C+ + +A +E+M
Sbjct: 112 YSALVDGLCK-CERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQM 170
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
+ CHPD ITY I C+ ++ +RG P + T++ I G R
Sbjct: 171 VAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRL 230
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
DA V + + + + + Y+ L + + + A +L +M+ + P+V Y
Sbjct: 231 RDA---VDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTY 284
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 5/204 (2%)
Query: 271 ALIEMFSVLGLYEM-AKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEP 329
A +M + YE+ + V K V + L+ +C + +LL E+ + GC P
Sbjct: 290 AFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPP 349
Query: 330 ITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFF 389
TYN V+ CK Q A EL+ + R P+ +TY I + CR G+ D A +
Sbjct: 350 TIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYL 409
Query: 390 NQMVKRG--LQPRLATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSNMLYSLLASLH 446
+Q+ G +A +A + R +DA + Y + Y ++ +++ +L
Sbjct: 410 DQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALC 469
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPN 470
K + P A +L EM+K G P
Sbjct: 470 -KAHQPQQAHELLEEMIKYGHTPG 492
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 5/146 (3%)
Query: 266 VSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
+S R L + VL A++V T ++++ +C R+L+ EM
Sbjct: 49 LSKARRLRDAVQVLQEMVSARHVPDNTT-----LTVVVQSLCLGDRVDDARELVEEMLHR 103
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G +TY+ ++ LCK + +A L+E M R C P +TY I CR + D A
Sbjct: 104 GMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEA 163
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGY 411
F QMV G P + T+ A I G+
Sbjct: 164 HGFMEQMVAEGCHPDIITYTALIGGF 189
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 3/163 (1%)
Query: 319 LVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCR 378
+V R V P T V+ LC + DA EL+EEML R +AITY + C+
Sbjct: 65 MVSARHV---PDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK 121
Query: 379 VGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML 438
+ D A M +RG P + T+ + I G+ R ++A+ ++ + +
Sbjct: 122 CERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIIT 181
Query: 439 YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y+ L K+ + +L E+ + G P++ Y V+ L
Sbjct: 182 YTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGL 224
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 90/237 (37%), Gaps = 18/237 (7%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+GG C + I + + K V K V Y L+ C+ +L
Sbjct: 253 IGGYCRAGDMDEAIRL--------LGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELF 304
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
+M P +T+ ++ LC G+ DA ELLEE+ R C P TY + C+
Sbjct: 305 QQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKA 364
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKS------ 433
+ A RG P T+ + G R + A +Y+ D+ S
Sbjct: 365 NQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYL----DQLNSEGGPCP 420
Query: 434 SSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
+S +Y+++ ++ A EM++ G P + + V+ L +HQ A
Sbjct: 421 TSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQA 477
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 88/220 (40%), Gaps = 25/220 (11%)
Query: 206 GRLDD-YETMRQLLND--------FN--VYQVCLNEKAFGFLPVLISSKALTKKGIWRVV 254
GRLDD YE +Q++ + F V +C + L +L + +T++G +
Sbjct: 295 GRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELL---EEITRRGCPPTI 351
Query: 255 EVLN-QVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFK 313
N V G C + VR E+ +A + + YNIL+ CR
Sbjct: 352 YTYNCVVDGYCKANQVRKAEEL--------VADFRSRGFVPNTVTYNILVAGCCRAGRTD 403
Query: 314 GPRDLLVEMRQVG--CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEI 371
L ++ G C Y +L LC++G+ DA + EEM+ R P A T+
Sbjct: 404 QALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFAT 463
Query: 372 FIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
+ C+ + A +M+K G P T A + Y
Sbjct: 464 VVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAY 503
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 77/176 (43%), Gaps = 1/176 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N++I +CR + + +M P LTY ++ L K + DA ++L+EM+
Sbjct: 8 HNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKARRLRDAVQVLQEMV 66
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD T + + C + D A +M+ RG+ T++A + G R +
Sbjct: 67 SARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLD 126
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+A V A++ + + + Y+ + + + A + +M+ G P++ Y
Sbjct: 127 EAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITY 182
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 41/97 (42%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V+ Y I++ +CR EM Q G P T+ V+ LCK Q A ELLE
Sbjct: 423 VAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLE 482
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
EM+ P T + + CR G A +++
Sbjct: 483 EMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 519
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNI++ +C+ ++L+ EM G P +TY+ ++ LCK G+ AC+LLEEM
Sbjct: 342 YNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMS 401
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD+ T + + GK D A + M RG P L T+ + G R +
Sbjct: 402 KEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRID 461
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A ++ + Y+++ + ++ A + EM+K G+ P+ +Y +L
Sbjct: 462 EAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLL 521
Query: 479 KHLHTSHQEHMA 490
L + E +A
Sbjct: 522 DGLARNGLEDLA 533
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 53/101 (52%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +N L+K +C L M + GCEP ++Y+ +L LCK G+ +AC L E
Sbjct: 144 VVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWE 203
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
EM+ ++C PD + Y F+ C+ + A + +MV +G
Sbjct: 204 EMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKG 244
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 69/150 (46%), Gaps = 3/150 (2%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
+AK V K V Y I+I +CR G + EM + G P T+ Y+ +L L +
Sbjct: 467 LAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLAR 526
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
NG + A ELL+ L C PD + +++ + C+ GK + A +M G T
Sbjct: 527 NGLEDLALELLKTSL---CKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFT 583
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKS 433
+ ++G + + A + V +++ + S
Sbjct: 584 YINVVRGLRKLGKVDKARQLVDDASETHTS 613
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 1/169 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVG-CEPITLTYNYVLGVLCKNGQDADACELL 354
V Y+++I C+ ++ M G C P +T+N +L LC + ++A L
Sbjct: 108 VITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLF 167
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
E M C P+ I+Y + C+ G+ D A + +MV++ P L + +F+ G
Sbjct: 168 EYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKA 227
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
R +A K + + +S + + K + A+N + E +
Sbjct: 228 NRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHL 276
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 70/162 (43%), Gaps = 5/162 (3%)
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
RQ G + TYN L L K A E ++M R PD TY I + C+ G+
Sbjct: 30 RQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGEL 89
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSNMLY-S 440
D A Q+ + G++ + T++ I G R +DA + + +SA + + S
Sbjct: 90 DKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNS 149
Query: 441 LLASLHDKNNNPVMAKNVLSE-MMKNGLRPNVSVYRRVLKHL 481
LL L + + VL E M K G PNV Y +L L
Sbjct: 150 LLKGLC--SGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGL 189
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 87/223 (39%), Gaps = 14/223 (6%)
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDF 312
V EVL +G + ++ +F LG K + V YN + + +
Sbjct: 8 VGEVLRHLGK------ISTIVRLFDWLGRQ-------KGYQHSVFTYNCFLDALAKANAG 54
Query: 313 KGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIF 372
+ + +M++ G P TY+ VL LCK G+ A ELL ++ + ITY +
Sbjct: 55 QLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVV 114
Query: 373 IVYSCRVGKFDVAFNFFNQM-VKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKY 431
I C+ + D A F M G P + T + +KG R +A+ A
Sbjct: 115 IDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAG 174
Query: 432 KSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + YS L K A + EM++ P++ Y
Sbjct: 175 CEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAY 217
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 94/259 (36%), Gaps = 47/259 (18%)
Query: 260 VGGSC---------LVSGVRALIEMFSVLGLYE-MAKYVIKKTERKVSYYNILIKEMCRR 309
GG C L+ G+ + M L+E MAK E V Y+ L+ +C+
Sbjct: 136 AGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAK---AGCEPNVISYSTLLDGLCKA 192
Query: 310 CDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITY 369
L EM + C P + Y + LCK + A+AC+ +M+ + DA+ +
Sbjct: 193 GRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAF 252
Query: 370 EI-----------------FIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI---- 408
I + CR G D A F +M+ R P I
Sbjct: 253 STVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVC 312
Query: 409 ------KGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM 462
G +F R + ++ Y + Y+++ K A+ +++EM
Sbjct: 313 KSKRLPDGVLLFQRMKSMKEF-------YCPPNLETYNIMVDNLCKAKQLDEAQELVNEM 365
Query: 463 MKNGLRPNVSVYRRVLKHL 481
GL P+V Y ++ L
Sbjct: 366 ANYGLSPDVVTYSALVDGL 384
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 105/232 (45%), Gaps = 5/232 (2%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKK-----TERKVSYYNILIKEM 306
RV+E L+ G + V ++ G + A ++++ E V YN ++K +
Sbjct: 178 RVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGL 237
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
C + ++L+ EM ++ C P +T+N ++ LC+NG E+L +M C PD
Sbjct: 238 CMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDI 297
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
Y I C+ G VA N+M GL+P + + +KG R+E+ + +
Sbjct: 298 RMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAE 357
Query: 427 SADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DK ++ +++L +N +L +M+ +G P+V Y V+
Sbjct: 358 MFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVI 409
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 116/283 (40%), Gaps = 20/283 (7%)
Query: 211 YETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGV- 269
+E +LL + L++ F L L RV+E+L Q+ LV G
Sbjct: 348 WEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVD----RVIELLEQM----LVHGCM 399
Query: 270 ------RALIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNILIKEMCRRCDFKGPRDL 318
+I F GL + A ++K + Y I++K +C + DL
Sbjct: 400 PDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDL 459
Query: 319 LVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCR 378
+ +M Q GC +T+N ++ LCK G A ELL++ML C PD I+Y I +
Sbjct: 460 MSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGK 519
Query: 379 VGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML 438
GK D A N MV +G+ P +++ R + D S +L
Sbjct: 520 AGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVL 579
Query: 439 YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y+ + S K A L+ M+ +G PN S Y +++ L
Sbjct: 580 YNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGL 622
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 5/137 (3%)
Query: 280 GLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
GL+E V+ + + Y +I +C+ K ++L M G +P + Y
Sbjct: 276 GLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCY 335
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N +L LC + + ELL EM ++C D +T+ I + + C+ G D QM+
Sbjct: 336 NTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLV 395
Query: 395 RGLQPRLATHAAFIKGY 411
G P + T+ I G+
Sbjct: 396 HGCMPDVITYTTVINGF 412
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 85/198 (42%), Gaps = 14/198 (7%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +++ +C R +L EM + GC PI Y+ +L C+ G A +LE++
Sbjct: 125 YFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLH 184
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY- 417
R C D + + C G D A + + G +P + ++ A +KG + R+
Sbjct: 185 ARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWG 244
Query: 418 ---EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
E + V ++ + N L S L +N VL++M ++G P++ +Y
Sbjct: 245 CVQELMEEMVRMACPPNIVTFNTLISYLC----RNGLFERVHEVLAQMAEHGCTPDIRMY 300
Query: 475 RRVLK------HLHTSHQ 486
++ HL +H+
Sbjct: 301 ATIIDGICKEGHLKVAHE 318
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 98/201 (48%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++ C + +L M++ EP + TY ++ +CK G+ +A ++ EEM+
Sbjct: 259 YNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMV 318
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P A+ Y I C G D+A + ++M+K+G+ P ++T+ + I F+ R +
Sbjct: 319 QKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTD 378
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + +K S + Y++L + + + N A + EM+ +G++P Y +L
Sbjct: 379 EAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLL 438
Query: 479 KHLHTSHQEHMAKCLSSRYSS 499
L ++ A L + +S
Sbjct: 439 HVLSKKNRMKEADDLFKKITS 459
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 100/251 (39%), Gaps = 44/251 (17%)
Query: 244 ALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLY-EMAKYVIKKTERKVSYYNIL 302
+ +KG+ +E N L+S L + LY EM + IK + V +NI+
Sbjct: 176 TMKEKGVLPTIETCNS-----LLSLFLKLNRTEAAWVLYAEMFRLRIKSS---VYTFNIM 227
Query: 303 IKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNC 362
I +C+ K +D + M G +P +TYN ++ C +G+ A +L M +
Sbjct: 228 INVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKI 287
Query: 363 HPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
PD+ TY I C+ G+ + A F +MV++GL+P + I G+
Sbjct: 288 EPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFC---------- 337
Query: 423 YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLH 482
N MA EM+K G+ P +S Y ++ L
Sbjct: 338 -------------------------NKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALF 372
Query: 483 TSHQEHMAKCL 493
+ A+C+
Sbjct: 373 MEQRTDEAECM 383
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 3/192 (1%)
Query: 283 EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLC 342
EM IK T++ Y L+ + ++ K DL ++ G P + +N ++ C
Sbjct: 421 EMLASGIKPTKKT---YTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHC 477
Query: 343 KNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLA 402
N A ELL++M PD +T+ + CR GK + A F++M +RG++P
Sbjct: 478 SNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHI 537
Query: 403 THAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM 462
+ I GY +DA++ D + + + Y+ L KN +A+ +L EM
Sbjct: 538 SFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEM 597
Query: 463 MKNGLRPNVSVY 474
+ G+ P+ + Y
Sbjct: 598 VSKGMTPDDTTY 609
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 9/169 (5%)
Query: 243 KALTKKGIWRVVEVLNQ-VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNI 301
K +T +G+ + N + G C S V+ E+ L +M + + E +N
Sbjct: 455 KKITSEGVLPDAIMFNALIDGHCSNSNVKGAFEL-----LKDMDRMKVPPDE---VTFNT 506
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
+++ CR + R+L EM++ G +P +++N ++ + G DA + EML
Sbjct: 507 IMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTG 566
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+P +TY + C+ + D+A +MV +G+ P T+ I+G
Sbjct: 567 FNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEG 615
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 70/180 (38%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
++ LIK C + M++ G P T N +L + K + A L EM
Sbjct: 154 FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMF 213
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
T+ I I C+ GK A +F M G++P + T+ + GY R E
Sbjct: 214 RLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVE 273
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + + + Y L S K A + EM++ GLRP+ +Y ++
Sbjct: 274 AADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLI 333
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 91/232 (39%), Gaps = 18/232 (7%)
Query: 262 GSCLVSGVRALIEMFSVL-------GLYEMAKYVI-----KKTERKVSYYNILIKEMCRR 309
G SGV+ I ++ + G E A ++ +K E Y LI MC++
Sbjct: 245 GHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQ 304
Query: 310 CDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITY 369
+ + EM Q G P + YN ++ C G A +EML + P TY
Sbjct: 305 GRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTY 364
Query: 370 EIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSAD 429
I + D A ++ ++G+ P T+ I GY R +A K +L +
Sbjct: 365 NSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGY---CRCANAKKAFLLHDE 421
Query: 430 KYKSS---SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
S + Y+ L + K N A ++ ++ G+ P+ ++ ++
Sbjct: 422 MLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALI 473
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 98/201 (48%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++ C + +L M++ EP + TY ++ +CK G+ +A ++ EEM+
Sbjct: 259 YNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMV 318
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P A+ Y I C G D+A + ++M+K+G+ P ++T+ + I F+ R +
Sbjct: 319 QKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTD 378
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + +K S + Y++L + + + N A + EM+ +G++P Y +L
Sbjct: 379 EAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLL 438
Query: 479 KHLHTSHQEHMAKCLSSRYSS 499
L ++ A L + +S
Sbjct: 439 HVLSKKNRMKEADDLFKKITS 459
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 100/251 (39%), Gaps = 44/251 (17%)
Query: 244 ALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLY-EMAKYVIKKTERKVSYYNIL 302
+ +KG+ +E N L+S L + LY EM + IK + V +NI+
Sbjct: 176 TMKEKGVLPTIETCNS-----LLSLFLKLNRTEAAWVLYAEMFRLRIKSS---VYTFNIM 227
Query: 303 IKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNC 362
I +C+ K +D + M G +P +TYN ++ C +G+ A +L M +
Sbjct: 228 INVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKI 287
Query: 363 HPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
PD+ TY I C+ G+ + A F +MV++GL+P + I G+
Sbjct: 288 EPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFC---------- 337
Query: 423 YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLH 482
N MA EM+K G+ P +S Y ++ L
Sbjct: 338 -------------------------NKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALF 372
Query: 483 TSHQEHMAKCL 493
+ A+C+
Sbjct: 373 MEQRTDEAECM 383
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 3/192 (1%)
Query: 283 EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLC 342
EM IK T++ Y L+ + ++ K DL ++ G P + +N ++ C
Sbjct: 421 EMLASGIKPTKKT---YTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHC 477
Query: 343 KNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLA 402
N A ELL++M PD +T+ + CR GK + A F++M +RG++P
Sbjct: 478 SNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHI 537
Query: 403 THAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM 462
+ I GY +DA++ D + + + Y+ L KN +A+ +L EM
Sbjct: 538 SFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEM 597
Query: 463 MKNGLRPNVSVY 474
+ G+ P+ + Y
Sbjct: 598 VSKGMTPDDTTY 609
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 79/169 (46%), Gaps = 9/169 (5%)
Query: 243 KALTKKGIWRVVEVLNQ-VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNI 301
K +T +G+ V + N + G C S V+ E+ L +M + + E +N
Sbjct: 455 KKITSEGVLPDVIMFNALIDGHCSNSNVKGAFEL-----LKDMDRMKVPPDE---VTFNT 506
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
+++ CR + R+L EM++ G +P +++N ++ + G DA + EML
Sbjct: 507 IMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTG 566
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+P +TY + C+ + D+A +MV +G+ P T+ I+G
Sbjct: 567 FNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEG 615
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 70/180 (38%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
++ LIK C + M++ G P T N +L + K + A L EM
Sbjct: 154 FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMF 213
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
T+ I I C+ GK A +F M G++P + T+ + GY R E
Sbjct: 214 RLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVE 273
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + + + Y L S K A + EM++ GLRP+ +Y ++
Sbjct: 274 AADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLI 333
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 92/232 (39%), Gaps = 18/232 (7%)
Query: 262 GSCLVSGVRALIEMFSVL-------GLYEMAKYVI-----KKTERKVSYYNILIKEMCRR 309
G SGV+ I ++ + G E A ++ +K E Y LI MC++
Sbjct: 245 GHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQ 304
Query: 310 CDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITY 369
+ + EM Q G P + YN ++ C G A +EML + P TY
Sbjct: 305 GRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTY 364
Query: 370 EIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSAD 429
I + D A ++ ++G+ P T+ I GY R +A K +L +
Sbjct: 365 NSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGY---CRCANAKKAFLLHDE 421
Query: 430 KYKSS---SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
S + Y+ L + K N A ++ ++ G+ P+V ++ ++
Sbjct: 422 MLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALI 473
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 85/186 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN +I +C+ ++L M + G P +TYN +L C +GQ +A L+
Sbjct: 231 VVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLK 290
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M PD +TY + + Y C+ G+ A F+ M KRGL+P + T+ ++GY
Sbjct: 291 KMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKG 350
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ + + L + ++S+L + A V S+M + GL PN Y
Sbjct: 351 ALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYG 410
Query: 476 RVLKHL 481
V+ L
Sbjct: 411 AVIGIL 416
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 81/188 (43%), Gaps = 3/188 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEM---RQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
YNIL+K +C + +LL M R G P ++Y V+ K G A
Sbjct: 161 YNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYH 220
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EML R PD +TY I C+ D A N MVK G+ P T+ + + GY
Sbjct: 221 EMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSG 280
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ ++A ++ + YSLL KN + A+ + M K GL+P ++ Y
Sbjct: 281 QPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYG 340
Query: 476 RVLKHLHT 483
+L+ T
Sbjct: 341 TLLQGYAT 348
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 81/183 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C ++ +L++EM G T+ +N ++ CK G+ ++ +L E M+
Sbjct: 444 YNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMV 503
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ ITY I C GK D A + MV GL+P T++ I GY R E
Sbjct: 504 RIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRME 563
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA S + Y+++ + AK + + ++G + +S Y +L
Sbjct: 564 DALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIIL 623
Query: 479 KHL 481
L
Sbjct: 624 HGL 626
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 88/213 (41%), Gaps = 35/213 (16%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+MRQ G P +TY V+G+LCK+G+ DA E+M+ P I Y I C
Sbjct: 396 KMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCN 455
Query: 381 KFDVA------------------FN-----------------FFNQMVKRGLQPRLATHA 405
K++ A FN F MV+ G++P + T+
Sbjct: 456 KWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYN 515
Query: 406 AFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKN 465
I GY + + ++A K + + + YS L + + K + A + EM +
Sbjct: 516 TLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESS 575
Query: 466 GLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYS 498
G+ P++ Y +L+ L + + AK L R +
Sbjct: 576 GVSPDIITYNIILQGLFQTRRTAAAKELYVRIT 608
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 79/187 (42%)
Query: 292 TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADAC 351
E V Y++L+ +C+ R + M + G +P TY +L G +
Sbjct: 297 VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMH 356
Query: 352 ELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
LL+ M+ HPD + I I GK D A F++M ++GL P T+ A I
Sbjct: 357 GLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGIL 416
Query: 412 FIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
R EDA Y D+ S N++Y+ L N A+ ++ EM+ G+ N
Sbjct: 417 CKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNT 476
Query: 472 SVYRRVL 478
+ ++
Sbjct: 477 IFFNSII 483
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 83/184 (45%)
Query: 295 KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
+++ Y L++ + LL M + G P ++ ++ G+ A +
Sbjct: 335 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVF 394
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
+M + +P+A+TY I C+ G+ + A +F QM+ GL P + + I G
Sbjct: 395 SKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTC 454
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
++E A + ++ D+ + + ++ + H K + ++ + M++ G++PNV Y
Sbjct: 455 NKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITY 514
Query: 475 RRVL 478
++
Sbjct: 515 NTLI 518
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 55/115 (47%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++N +I C+ L M ++G +P +TYN ++ C G+ +A +LL M
Sbjct: 478 FFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGM 537
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+ P+ +TY I C++ + + A F +M G+ P + T+ ++G F
Sbjct: 538 VSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLF 592
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 84/216 (38%), Gaps = 39/216 (18%)
Query: 279 LGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE-MRQVGCEPITLTYNYV 337
LG + + K + L+K +C D+++ M ++GC P +YN +
Sbjct: 105 LGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNIL 164
Query: 338 LGVLCKNGQDADACELLEEML---GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
L LC + +A ELL M G PD ++Y I + G D A++ +++M+
Sbjct: 165 LKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLD 224
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM 454
RG+ P + T+ + I A DK
Sbjct: 225 RGILPDVVTYNSIIAAL-----------------------------CKAQAMDK------ 249
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
A VL+ M+KNG+ P+ Y +L +S Q A
Sbjct: 250 AMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEA 285
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 51/106 (48%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNI+++ + + ++L V + + G + TYN +L LCKN DA ++ + +
Sbjct: 584 YNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLC 643
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
+ +A T+ I I +VG+ D A + F GL P T+
Sbjct: 644 LMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTY 689
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 4/119 (3%)
Query: 364 PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY 423
PD TY I I CR G+ D+ F ++K+G + +KG R DA
Sbjct: 85 PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144
Query: 424 VVLSADKYKSSSNML-YS-LLASLHDKNNNPVMAK--NVLSEMMKNGLRPNVSVYRRVL 478
V+ + N+ Y+ LL L D+N + + +++++ G P+V Y V+
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVI 203
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 281 LYEMAKYVIKKTERK----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNY 336
L+E K++ + R V Y +LI +C+ LL +MR+ C P +TYN
Sbjct: 62 LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNS 120
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
++ LCK + ++A +LLEEM+ C PD TY I C+ K D A F Q+V RG
Sbjct: 121 LISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARG 180
Query: 397 LQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM----LYSLLASLHDKNNNP 452
+P + T++ I G R ++A + L KS S M Y+ L S +
Sbjct: 181 FRPDVVTYSCLIDGLCKEGRLKEA---IDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKM 237
Query: 453 VMAKNVLSEMMKNGLRPNVSVY 474
A N+L M + G P+V Y
Sbjct: 238 DEAMNLLERMAETGSSPDVVTY 259
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 72/146 (49%), Gaps = 3/146 (2%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVG-CEPITLTYNYVLGVLCKNGQDADACELL 354
V Y+ LI +C+ K DL M + G C P T+TYN ++ C+ G+ +A LL
Sbjct: 185 VVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLL 244
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
E M PD +TY + C++ + D A++ NQM ++GL P + T + + G
Sbjct: 245 ERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRE 304
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYS 440
R DA +L + KS S +Y+
Sbjct: 305 NRLSDAVH--ILGEMRRKSCSPTVYT 328
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 12/189 (6%)
Query: 285 AKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
A +++ + RK V YN ++ CR + R ++E ++ C P +++N ++
Sbjct: 310 AVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE--EMDCPPNVVSFNIMIR 367
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR-GLQ 398
LCK + ++A EL+EE R C+PD + Y I CR K D A + +M++ G
Sbjct: 368 GLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCL 427
Query: 399 PRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNV 458
P T++ I G + A Y+ +K + Y+LL K N A+ +
Sbjct: 428 PNSITYSTLITGLCNAGMLDRARGYI----EKGCVPNIGTYNLLIDAFRKANRDEDAREL 483
Query: 459 LSEMMKNGL 467
L +M++ G
Sbjct: 484 LDDMVQRGF 492
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 82/184 (44%), Gaps = 4/184 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI CR +LL M + G P +TY ++ CK + DA +LL +M
Sbjct: 224 YNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMT 283
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD +T+ + CR + A + +M ++ P + T+ + GY + E
Sbjct: 284 RKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLE 343
Query: 419 DAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+A K+++ D N++ ++++ K N A ++ E + P+V +Y V
Sbjct: 344 EARKFMLEEMD---CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTV 400
Query: 478 LKHL 481
+ L
Sbjct: 401 IDGL 404
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 1/176 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI+ +C+ + L +M G P TY V+ LC + +A + LEEM
Sbjct: 14 YTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMA 73
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
RN P+ +TY + I C+ G+ D A ++M K+ + P T+ + I G R
Sbjct: 74 NRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERAS 132
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+AY + Y+ L + K+ A V +++ G RP+V Y
Sbjct: 133 EAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 68/164 (41%), Gaps = 1/164 (0%)
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
C +TY ++ LCK + A L +M+ + HPD TY I C + A
Sbjct: 7 CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
F +M R L P + T+ I G R ++A + K ++ SL++ L
Sbjct: 67 KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISGLC 126
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
K A ++L EM+ +G P++ Y ++ S + A
Sbjct: 127 -KAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDA 169
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 59/130 (45%), Gaps = 1/130 (0%)
Query: 361 NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
+C D +TY I C+V + + A F +MV +G P + T+ A I + R +A
Sbjct: 6 SCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEA 65
Query: 421 YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKH 480
K++ A++ + + + Y++L K A +LS+M K + P Y ++
Sbjct: 66 RKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISG 124
Query: 481 LHTSHQEHMA 490
L + + A
Sbjct: 125 LCKAERASEA 134
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI +C+ +L M G P T TYN ++ C GQ +A LL+
Sbjct: 235 VVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLK 294
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M G PD +TY + I Y C++G+ A + F+ MV++G +P + + GY
Sbjct: 295 KMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKG 354
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
D + L + +++L + K+ A +EM +NGLRP+V Y
Sbjct: 355 ALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYS 414
Query: 476 RVLKHL 481
V+ L
Sbjct: 415 TVIHIL 420
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 83/183 (45%), Gaps = 3/183 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVG---CEPITLTYNYVLGVLCKNGQDADACELLE 355
YN LIK +C + +LL+ M G C P ++YN V+ K G+ A L
Sbjct: 165 YNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFH 224
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM+G+ PD +TY I C+ D A M +G+ P T+ I+GY
Sbjct: 225 EMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLG 284
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ E+A + + + + YSLL + K A++V M++ G +PN ++Y
Sbjct: 285 QLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYH 344
Query: 476 RVL 478
+L
Sbjct: 345 ILL 347
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 10/188 (5%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ LI +C ++K +L EM G P + N ++ LCK G+ +A + + ++
Sbjct: 448 FTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVI 507
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD ++Y I C VGK D + ++MV GL+P T+ + + GYF R E
Sbjct: 508 HIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVE 567
Query: 419 DA---YKYVVLSADKY--KSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
DA Y+ + K+ +S+ ML+ L + V A+ + +M+ G + +
Sbjct: 568 DALALYREMFRKDVKFCAITSNIMLHGLFQA-----GRIVAARELYMKMVDRGTQLRIET 622
Query: 474 YRRVLKHL 481
Y VL L
Sbjct: 623 YNTVLGGL 630
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 57/113 (50%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
NI++ + + R+L ++M G + TYN VLG LC+N +A + E++
Sbjct: 589 NIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRS 648
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+ D T+ I I +VG+ D A + F+ MV RG P + T++ IK +
Sbjct: 649 KEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHI 701
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 93/233 (39%), Gaps = 8/233 (3%)
Query: 254 VEVLNQVGGSCLVSGVRA---LIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKE 305
V +L ++ GS L V LI+ + +G A+ V RK + Y+IL+
Sbjct: 290 VRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHG 349
Query: 306 MCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPD 365
+ RDLL M + G +N ++ K+G A EM PD
Sbjct: 350 YATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPD 409
Query: 366 AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV 425
++Y I C+ G+ + A FNQMV GL P + + + I G ++ +
Sbjct: 410 VVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAF 469
Query: 426 LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
++ + + + K V A++ ++ G++P+V Y ++
Sbjct: 470 EMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLI 522
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 60/134 (44%), Gaps = 10/134 (7%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRD----LLVEMRQVGCEPITLTYNY 336
++M ++ K + V YN LI C F G D L M +G P + TYN
Sbjct: 502 FFDMVIHIGVKPD--VVSYNTLIDGYC----FVGKMDESIKQLDRMVSIGLRPDSWTYNS 555
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
+L KNG+ DA L EM ++ AIT I + + G+ A + +MV RG
Sbjct: 556 LLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRG 615
Query: 397 LQPRLATHAAFIKG 410
Q R+ T+ + G
Sbjct: 616 TQLRIETYNTVLGG 629
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%)
Query: 286 KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNG 345
K V + T+ ++ YN ++ +C + ++R E T++ V+ L K G
Sbjct: 610 KMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVG 669
Query: 346 QDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
+ +A L M+ R PD ITY + I G + + N F M K G
Sbjct: 670 RIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNG 720
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 96/203 (47%), Gaps = 9/203 (4%)
Query: 210 DYETMRQLLNDFNVYQVCLNE-KAFGFLPVLISSK-ALTKKGIWRVVEVLNQVGGSCLVS 267
D T R + D +Y + ++ + G + ++ K A+ KKGI V N CL++
Sbjct: 358 DGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYN-----CLIT 412
Query: 268 GVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGC 327
G + S GL + K K E V YN+LI +C + + + LL EM +VG
Sbjct: 413 GFSRSGDWRSASGLLDEMKE--KGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGL 470
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
EP LTYN ++ C G A E+ M + +TY +FI Y C++GK D A +
Sbjct: 471 EPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEAND 530
Query: 388 FFNQMVKRGLQPRLATHAAFIKG 410
N+M+ + L P T+ +G
Sbjct: 531 LLNEMLDKCLVPNGITYETIKEG 553
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 94/220 (42%), Gaps = 8/220 (3%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+ G C S A + +F EM + I + V YN LI +C + L+
Sbjct: 271 INGYCKNSNTAAAVRVFE-----EMKQQGIAAS---VVTYNSLISGLCSEGKVEEGVKLM 322
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
EM +G P +T+ VL CK G ADA + ++ M RN PD + Y I I R+
Sbjct: 323 EEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRL 382
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
GK + A M K+G+ P + T+ I G+ + A + +K + + Y
Sbjct: 383 GKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTY 442
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
++L A +L EM + GL PN Y +++
Sbjct: 443 NVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQ 482
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 88/201 (43%), Gaps = 3/201 (1%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L EM + I T + +LI C+ + + EM+Q G +TYN ++
Sbjct: 252 LKEMVEAGISPT---AVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISG 308
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
LC G+ + +L+EEM P+ IT+ + C+ G A ++ + M +R ++P
Sbjct: 309 LCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPD 368
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
+ + I Y + EDA A K S + Y+ L + ++ + A +L
Sbjct: 369 VVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLD 428
Query: 461 EMMKNGLRPNVSVYRRVLKHL 481
EM + G+ +V Y ++ L
Sbjct: 429 EMKEKGIEADVVTYNVLIGAL 449
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 9/185 (4%)
Query: 296 VSYYNILIKEMCRRCDFKGPRD------LLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
V+ YN LI C++ G + LL EM + G P +T+ ++ CKN A
Sbjct: 226 VATYNSLIDGYCKK---GGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAA 282
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A + EEM + +TY I C GK + +M GL P T +K
Sbjct: 283 AVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLK 342
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
G+ DA ++ ++ ++Y++L ++ + A V M K G+ P
Sbjct: 343 GFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISP 402
Query: 470 NVSVY 474
NV+ Y
Sbjct: 403 NVTTY 407
>gi|302780493|ref|XP_002972021.1| hypothetical protein SELMODRAFT_412471 [Selaginella moellendorffii]
gi|300160320|gb|EFJ26938.1| hypothetical protein SELMODRAFT_412471 [Selaginella moellendorffii]
Length = 2052
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 81/184 (44%), Gaps = 4/184 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNI++ +C+ K DLL M C P TYN ++ LCK G+ DA L+E M
Sbjct: 1735 YNIILTHLCKHGKEKEALDLLHSMATTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQ 1794
Query: 359 GRNCHPDAITYEIFIVYSCRVG----KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
R C D +TY I CR G + + AF F +MV +G P T+ I
Sbjct: 1795 ARECPTDIVTYNTLIHGLCRKGNGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRV 1854
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
E A K + L + + + Y++L + K A ++ EM G P+V Y
Sbjct: 1855 KMDEQAQKVLDLMHENGCAFDLVTYNMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTY 1914
Query: 475 RRVL 478
++
Sbjct: 1915 NSIV 1918
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 101/232 (43%), Gaps = 6/232 (2%)
Query: 276 FSVLGLYEMAKYVIKKTERKVSY-YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
F V + + + ++ K S Y ++I + R + + +L M + GC +TY
Sbjct: 1820 FRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLVTY 1879
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N ++ K G A +L EM R C PD +TY + C+ GK + A F +M
Sbjct: 1880 NMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSIVDGFCKAGKVEEANKLFAEMKA 1939
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM 454
RG+ P T+ + R +DA+ Y+V K + Y L S K +
Sbjct: 1940 RGIFPNGRTYTSITDACLKAGRMQDAHAYLV-EMRKEGLVDAISYVALISTICKLGKGKL 1998
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVLKHL----HTSHQEHMAKCLSSRYSSLSL 502
+L EM++ G +PN+ + V + L +T + M + L ++SS L
Sbjct: 1999 GFQLLREMLEKGFKPNLVTFNVVFEALSKESNTDDAKIMIQELRQQHSSPPL 2050
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 77/172 (44%), Gaps = 4/172 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ +++ C + + LL M++ YN +L LCK+G++ +A +LL M
Sbjct: 1700 YSTIVRGYCEDGETRQALALLEHMKKAEVPANAKLYNIILTHLCKHGKEKEALDLLHSMA 1759
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI----F 414
+C PD TY I I C+VG+ + A M R + T+ I G
Sbjct: 1760 TTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQARECPTDIVTYNTLIHGLCRKGNGR 1819
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNG 466
+R E A++ DK + +++ Y+++ + A+ VL M +NG
Sbjct: 1820 FRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENG 1871
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 76/188 (40%), Gaps = 5/188 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLV-EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
+N L++ + + +K +L+ E + + TY+ ++ C++G+ A LLE M
Sbjct: 1664 FNRLLEFLVNKRQYKRAHQMLIAESKPSSFQANAFTYSTIVRGYCEDGETRQALALLEHM 1723
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
+A Y I + + C+ GK A + + M P + T+ I R
Sbjct: 1724 KKAEVPANAKLYNIILTHLCKHGKEKEALDLLHSMATTSCAPDIYTYNILINALCKVGRL 1783
Query: 418 EDAYKYVVLSADKYKSSSNMLY-SLLASLHDKNNNPV---MAKNVLSEMMKNGLRPNVSV 473
EDA V + + + + Y +L+ L K N A + EM+ G P
Sbjct: 1784 EDAQGLVEMMQARECPTDIVTYNTLIHGLCRKGNGRFRVERAFRLFEEMVDKGHTPTSVT 1843
Query: 474 YRRVLKHL 481
Y V+ L
Sbjct: 1844 YTVVIDAL 1851
>gi|255565671|ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536913|gb|EEF38551.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 528
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 82/180 (45%), Gaps = 2/180 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y I+I +CR D+ EM VGCEP ++T+N +L V K G+ ++
Sbjct: 281 VYTYTIVIDALCRCGQITRAHDVFAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYN 340
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M C PD +TY I C+ G D A N MVK+G P +T
Sbjct: 341 QMKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCSPNASTFNGLFGSIAKLR 400
Query: 416 RYEDAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
A++ Y + K K+++ + Y++L + + M + EM ++ + PNV+ Y
Sbjct: 401 DVNGAHRLYAKMKELKCKANT-VTYNILMRMFVDTKSTDMVLKLKKEMDEDDVEPNVNTY 459
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 71/184 (38%), Gaps = 35/184 (19%)
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
K E V Y L++ CR + + EM+ GC P TY V+ LC+ GQ A
Sbjct: 241 KFEPDVIVYTNLVRGWCRAGNIPEAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRA 300
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
++ EML C P++IT+ + + G+ + +NQM + G P T
Sbjct: 301 HDVFAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVT------- 353
Query: 411 YFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
Y+ L H K+ N A VL+ M+K G PN
Sbjct: 354 ----------------------------YNFLIESHCKDGNLDEALKVLNSMVKKGCSPN 385
Query: 471 VSVY 474
S +
Sbjct: 386 ASTF 389
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
S +N L + + D G L +M+++ C+ T+TYN ++ + +L +
Sbjct: 386 ASTFNGLFGSIAKLRDVNGAHRLYAKMKELKCKANTVTYNILMRMFVDTKSTDMVLKLKK 445
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV-KRGLQPRLATHAAFIK 409
EM + P+ TY + I C +G ++ A+ FF +MV ++ L+P L + ++
Sbjct: 446 EMDEDDVEPNVNTYCVLIAMYCGMGHWNNAYKFFREMVEEKCLKPSLPVYEKVLQ 500
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 52/125 (41%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI+ C+ + +L M + GC P T+N + G + K A L +M
Sbjct: 354 YNFLIESHCKDGNLDEALKVLNSMVKKGCSPNASTFNGLFGSIAKLRDVNGAHRLYAKMK 413
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C + +TY I + D+ +M + ++P + T+ I Y +
Sbjct: 414 ELKCKANTVTYNILMRMFVDTKSTDMVLKLKKEMDEDDVEPNVNTYCVLIAMYCGMGHWN 473
Query: 419 DAYKY 423
+AYK+
Sbjct: 474 NAYKF 478
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 84/222 (37%), Gaps = 3/222 (1%)
Query: 267 SGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
+ VR I F L + A T YN +I + +F ++ M+
Sbjct: 114 AAVRHGIPFFQALSFFNWATSRPGFTHHP-EPYNEMIDLAGKVRNFDLGWQVIDLMKARN 172
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
E T++ ++ + G ++A M NC PD I + I I CR + A
Sbjct: 173 VEISIETFSILIRRYVRAGLASEAVHAFNRMEDYNCKPDKIAFSILISILCRKRRATEAQ 232
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
+FF+ + K +P + + ++G+ +A + + Y+++
Sbjct: 233 SFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIPEAERVFTEMKVAGCMPNVYTYTIVIDAL 291
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK-HLHTSHQE 487
+ A +V +EM+ G PN + +L+ H+ E
Sbjct: 292 CRCGQITRAHDVFAEMLDVGCEPNSITFNNLLRVHVKAGRTE 333
>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 128/314 (40%), Gaps = 25/314 (7%)
Query: 173 EKVSALCFLKYMREIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFN-----VYQVC 227
EK L F Y + +PE I+ GR+ D R+ + FN + Q
Sbjct: 115 EKNFILVFRAYGKAHLPE---------KAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEG 165
Query: 228 LNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKY 287
L +A F + K + V+ + C + V IE+F EMA
Sbjct: 166 LFHRALEFYECGVGGKTNISPNVLSFNLVIKAM---CKLGLVDRAIEVFR-----EMA-- 215
Query: 288 VIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQD 347
I+K E V Y L+ +C+ LL EM+ GC P ++T+N ++ LCK G
Sbjct: 216 -IQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDM 274
Query: 348 ADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAF 407
+L++ M + C P+ +TY I C GK D A + ++MV P T+
Sbjct: 275 VRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTL 334
Query: 408 IKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
I G R D + ++ ++ YS L S K A + +M++ G
Sbjct: 335 INGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGC 394
Query: 468 RPNVSVYRRVLKHL 481
+PN+ VY ++ L
Sbjct: 395 QPNIVVYSALIDGL 408
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 4/216 (1%)
Query: 258 NQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRD 317
N+ S L+SG+ + +GL++ K V K + + Y+ LI +CR ++
Sbjct: 362 NEYAYSTLISGLFKEEKSEEAMGLWK--KMVEKGCQPNIVVYSALIDGLCREGKLDEAKE 419
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
+L EM GC P TY+ ++ K G A + +EM NC P+ I Y + I C
Sbjct: 420 ILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLC 479
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV--VLSADKYKSSS 435
GK A + M+ RGL+P + +++ I G E K +L +
Sbjct: 480 EDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPD 539
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
+ Y++L K N+ A ++L+ M+ G P++
Sbjct: 540 VVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDL 575
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 87/218 (39%), Gaps = 35/218 (16%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N+LI +C++ D L+ M GC P +TYN ++ LC G+ A LL+ M+
Sbjct: 261 FNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMV 320
Query: 359 GRNCHPDAITYEIFI-----------------------------VYSCRVG------KFD 383
C P+ +TY I YS + K +
Sbjct: 321 ASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSE 380
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
A + +MV++G QP + ++A I G + ++A + + +K + + YS L
Sbjct: 381 EAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLI 440
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K N A V EM KN PN Y ++ L
Sbjct: 441 KGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGL 478
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 80/203 (39%), Gaps = 18/203 (8%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y++LI +C + + M G P + Y+ ++ LC G +L EML
Sbjct: 471 YSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEML 530
Query: 359 GR--NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
+ + PD +TY I + C+ A + N M+ RG P L T F+
Sbjct: 531 CQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNA------ 584
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
+ + + L L+ LH K V A ++ M++ L PN S + R
Sbjct: 585 -------LREKLNPPQDGREFLDELVVRLH-KRQRIVGAAKIIEVMLQKFLPPNASTWER 636
Query: 477 VLKHLHTSH--QEHMAKCLSSRY 497
++ L Q + KC SS +
Sbjct: 637 IIPELCKPKKVQAIIDKCWSSLF 659
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 281 LYEMAKYVIKKTERK----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNY 336
L+E K++ + R V Y +LI +C+ LL +MR+ C P +TYN
Sbjct: 62 LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNS 120
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
++ LCK + ++A +LLEEM+ C PD TY I C+ K D A F Q+V RG
Sbjct: 121 LISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARG 180
Query: 397 LQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM----LYSLLASLHDKNNNP 452
+P + T++ I G R ++A + L KS S M Y+ L S +
Sbjct: 181 FRPDVVTYSCLIDGLCKEGRLKEA---IDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKM 237
Query: 453 VMAKNVLSEMMKNGLRPNVSVY 474
A N+L M + G P+V Y
Sbjct: 238 DEAMNLLERMAETGSSPDVVTY 259
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 72/146 (49%), Gaps = 3/146 (2%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVG-CEPITLTYNYVLGVLCKNGQDADACELL 354
V Y+ LI +C+ K DL M + G C P T+TYN ++ C+ G+ +A LL
Sbjct: 185 VVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLL 244
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
E M PD +TY + C++ + D A++ NQM ++GL P + T + + G
Sbjct: 245 ERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRE 304
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYS 440
R DA +L + KS S +Y+
Sbjct: 305 NRLSDAVH--ILGEMRRKSCSPTVYT 328
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 88/189 (46%), Gaps = 12/189 (6%)
Query: 285 AKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
A +++ + RK V YN ++ CR + R ++E ++ C P +++N ++
Sbjct: 310 AVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE--EMDCPPNVVSFNIMIR 367
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR-GLQ 398
LCK + ++A EL+EE R C+PD + Y I CR K D A + +M++ G
Sbjct: 368 GLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCL 427
Query: 399 PRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNV 458
P T++ + G + A Y+ +K + Y+LL K N A+ +
Sbjct: 428 PNSITYSTLVTGLCNAGMLDRARGYI----EKGCVPNIGTYNLLIDAFRKANRDEDAREL 483
Query: 459 LSEMMKNGL 467
L +M++ G
Sbjct: 484 LDDMVQRGF 492
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 82/184 (44%), Gaps = 4/184 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI CR +LL M + G P +TY ++ CK + DA +LL +M
Sbjct: 224 YNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMT 283
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD +T+ + CR + A + +M ++ P + T+ + GY + E
Sbjct: 284 RKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLE 343
Query: 419 DAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+A K+++ D N++ ++++ K N A ++ E + P+V +Y V
Sbjct: 344 EARKFMLEEMD---CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTV 400
Query: 478 LKHL 481
+ L
Sbjct: 401 IDGL 404
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 1/176 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI+ +C+ + L +M G P TY V+ LC + +A + LEEM
Sbjct: 14 YTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMA 73
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
RN P+ +TY + I C+ G+ D A ++M K+ + P T+ + I G R
Sbjct: 74 NRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERAS 132
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+AY + Y+ L + K+ A V +++ G RP+V Y
Sbjct: 133 EAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 68/164 (41%), Gaps = 1/164 (0%)
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
C +TY ++ LCK + A L +M+ + HPD TY I C + A
Sbjct: 7 CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
F +M R L P + T+ I G R ++A + K ++ SL++ L
Sbjct: 67 KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISGLC 126
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
K A ++L EM+ +G P++ Y ++ S + A
Sbjct: 127 -KAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDA 169
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 59/130 (45%), Gaps = 1/130 (0%)
Query: 361 NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
+C D +TY I C+V + + A F +MV +G P + T+ A I + R +A
Sbjct: 6 SCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEA 65
Query: 421 YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKH 480
K++ A++ + + + Y++L K A +LS+M K + P Y ++
Sbjct: 66 RKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISG 124
Query: 481 LHTSHQEHMA 490
L + + A
Sbjct: 125 LCKAERASEA 134
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 91/201 (45%)
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
K E V YN +I +C+ +L EM G P +TY+ ++ LC G+ +DA
Sbjct: 251 KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDA 310
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
LL +M+ R +PD T+ I + GK A +++MVKR + P + T+++ I G
Sbjct: 311 SRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLING 370
Query: 411 YFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
+ + R ++A + K+ + Y+ L K V EM + GL N
Sbjct: 371 FCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 430
Query: 471 VSVYRRVLKHLHTSHQEHMAK 491
Y +++ L + MA+
Sbjct: 431 TVTYNILIQGLFQAGDCDMAQ 451
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L+ M GC+P +TY V+ LCK G A LL +M P + Y I C
Sbjct: 208 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 267
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ D A N F +M +G++P + T+++ I + R+ DA + + ++ +
Sbjct: 268 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 327
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+S L K V A+ + EM+K + P++ Y
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 364
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L+ +M G +P T+T+N ++ L + + ++A L++ M+ + C PD +TY + + C
Sbjct: 173 LVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLC 232
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ G D+AFN N+M + L+P + + I G + +DA K + +
Sbjct: 233 KRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVV 292
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
YS L S A +LS+M++ + P+V +
Sbjct: 293 TYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTF 329
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNILI+ + + D +++ EM G P +TYN +L LCKNG+ A + E +
Sbjct: 434 YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 493
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
P TY I I C+ GK + ++ F + +G++P + + I G+
Sbjct: 494 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF 546
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 88/199 (44%), Gaps = 1/199 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LIK C+ + ++ EM Q G T+TYN ++ L + G A E+ +
Sbjct: 396 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 455
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM+ P+ +TY + C+ GK + A F + + ++P + T+ I+G
Sbjct: 456 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 515
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ ED + + K + Y+ + S + + A + EM ++G PN Y
Sbjct: 516 KVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYN 575
Query: 476 RVLK-HLHTSHQEHMAKCL 493
+++ L +E A+ +
Sbjct: 576 TLIRARLRDGDREASAELI 594
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 78/198 (39%), Gaps = 35/198 (17%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
++ + +K V ++ LI + L EM + +P +TY+ ++ C
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
+ + +A ++ E M+ ++C PD +TY I C+ + + F +M +RGL T
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 433
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
+ I+G F + + MA+ + EM+
Sbjct: 434 YNILIQGLF-----------------------------------QAGDCDMAQEIFKEMV 458
Query: 464 KNGLRPNVSVYRRVLKHL 481
+G+ PN+ Y +L L
Sbjct: 459 SDGVPPNIMTYNTLLDGL 476
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 72/174 (41%), Gaps = 2/174 (1%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M+ +G TY+ ++ C+ Q A +L +M+ P+ +T + C
Sbjct: 106 QMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSK 165
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+ A +QM G QP T I G F+ + +A + K + Y
Sbjct: 166 RISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYG 225
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLS 494
++ + K + +A N+L++M + L P V +Y ++ L +HM L+
Sbjct: 226 VVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL--CKYKHMDDALN 277
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 47/113 (41%)
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
K E + YNI+I+ MC+ + DL + G +P + YN ++ C+ G +A
Sbjct: 496 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 555
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
L +EM P++ Y I R G + + +M G +T
Sbjct: 556 DALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 608
Score = 38.1 bits (87), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 68/156 (43%), Gaps = 6/156 (3%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P + ++ +L + K + L E+M + TY I I CR + +A
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV-VLSADKYKSSSNMLYSLLAS--L 445
+M+K G +P + T ++ + GY R +A V + Y+ ++ +L+ L
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
H+K + A ++ M+ G +P++ Y V+ L
Sbjct: 199 HNKASE---AMALIDRMVAKGCQPDLVTYGVVVNGL 231
>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
Length = 658
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 85/193 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ +C+ LL EM+ GC P + YN ++ LCK G + +L++ M
Sbjct: 225 YCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMF 284
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C P+ +TY I C GK D A + +MV P T+ I G R
Sbjct: 285 LKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAM 344
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
D + ++ ++ + +YS+L S K A + +M + G RPN+ VY V+
Sbjct: 345 DGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVI 404
Query: 479 KHLHTSHQEHMAK 491
L + + AK
Sbjct: 405 DGLCREGKPNEAK 417
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 87/187 (46%), Gaps = 3/187 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V+Y ++ + +R G R LL+ M + G Y+ ++ L K G+ +A L +
Sbjct: 328 VTYGTLINGLVKQRRAMDGAR-LLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWK 386
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M + C P+ + Y I CR GK + A N M+ G P + T+++ +KG+F
Sbjct: 387 KMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTG 446
Query: 416 RYEDAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
E+A + V D+ S N YS+L A V S+M+ G++P+ Y
Sbjct: 447 LSEEAIQ-VWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAY 505
Query: 475 RRVLKHL 481
++K L
Sbjct: 506 SSMIKGL 512
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 22/152 (14%)
Query: 258 NQVGGSCLVSGVRALIEMFSVLGLY-EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPR 316
+ V S ++ G+ + M + L LY EM K++ V YNIL+ +C + D
Sbjct: 501 DTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAV 560
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVL------CKNGQD---------------ADACELLE 355
DLL M GC+P +T N L L C+ G+ + AC+++E
Sbjct: 561 DLLNCMLDRGCDPDVITCNTFLNTLSEKSDSCEEGRSFLEELVARLLKRQRVSGACKIVE 620
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
MLG+ P T+ + + C+ K + A N
Sbjct: 621 VMLGKYLAPKTSTWAMIVPEICKPKKINAAIN 652
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
EM + GC Y+ ++ LC G+ +A + +ML PD + Y I C +G
Sbjct: 457 EMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIG 516
Query: 381 KFDVAFNFFNQMV---KRGLQPRLATHAAFIKG 410
D A +++M+ + QP + T+ + G
Sbjct: 517 SMDAALKLYHEMLCQEEPKSQPDVVTYNILLDG 549
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 94/230 (40%), Gaps = 32/230 (13%)
Query: 199 SLVIDNCGRLDDYETMRQLLNDF-------NVYQVCLNEKAFGFLPVLISSKALTKKGIW 251
S VID R +++LN NVY K GF +S +A+ +W
Sbjct: 401 SAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMK--GFFKTGLSEEAIQ---VW 455
Query: 252 RVVEVL----NQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMC 307
R ++ N+ S L+ G+ + + + ++ +K + + Y+ +IK +C
Sbjct: 456 REMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVW--SKMLTIGIKPDTVAYSSMIKGLC 513
Query: 308 RRCDFKGPRDLLVEM---RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHP 364
L EM + +P +TYN +L LC + A +LL ML R C P
Sbjct: 514 GIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDP 573
Query: 365 DAITYEIFIVY------SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
D IT F+ SC G+ +F ++V R L+ + + A I
Sbjct: 574 DVITCNTFLNTLSEKSDSCEEGR-----SFLEELVARLLKRQRVSGACKI 618
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+I+I +C+ + L EM G + + Y+ ++G LC +G+ D ++L
Sbjct: 244 VVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLR 303
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM+GRN P+ +T+ I + GK A +N+MV RG+ P T+++ I G+
Sbjct: 304 EMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKEN 363
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R +A + + L K + + YS+L + + K + E+ GL + Y
Sbjct: 364 RLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYN 423
Query: 476 RVLKHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
+++ S + ++AK L S + SV
Sbjct: 424 TLVQGFCQSGKLNVAKELFQEMVSRGVPPSV 454
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 111/263 (42%), Gaps = 31/263 (11%)
Query: 215 RQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCL---VSGVRA 271
R+LL F+V L FGF P I+ L + G CL VS A
Sbjct: 118 RKLLFAFSVVGRALK---FGFEPNTITFSTL--------------INGFCLEGRVSEAVA 160
Query: 272 LIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPIT 331
L++ + V K V N LI +C + L+ M + GCE
Sbjct: 161 LVD-----------RMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANE 209
Query: 332 LTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQ 391
+TY VL +CK+G A A +L +M R+ + Y I I C+ G D A + FN+
Sbjct: 210 ITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNE 269
Query: 392 MVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNN 451
M +G++ + +++ I G R++D K + + + + +S L + K
Sbjct: 270 MEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGK 329
Query: 452 PVMAKNVLSEMMKNGLRPNVSVY 474
+ AK + +EM+ G+ P+ Y
Sbjct: 330 LLEAKELYNEMVARGIAPDTITY 352
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 86/193 (44%)
Query: 289 IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
+K + V Y+ +I +C + +L EM P +T++ ++ V K G+
Sbjct: 272 MKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLL 331
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
+A EL EM+ R PD ITY I C+ + A + MV +G +P + T++ I
Sbjct: 332 EAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILI 391
Query: 409 KGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLR 468
Y R ++ + + K + + Y+ L ++ +AK + EM+ G+
Sbjct: 392 NSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVP 451
Query: 469 PNVSVYRRVLKHL 481
P+V Y +L L
Sbjct: 452 PSVVTYGILLDGL 464
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 1/198 (0%)
Query: 288 VIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQD 347
V K E + Y+ILI C+ L E+ G T+TYN ++ C++G+
Sbjct: 376 VSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKL 435
Query: 348 ADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAF 407
A EL +EM+ R P +TY I + C G+ A F +M K + + +
Sbjct: 436 NVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNII 495
Query: 408 IKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
I G + +DA+ + K + Y+++ K + A + +M ++G
Sbjct: 496 IHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 555
Query: 468 RPNVSVYRRVLK-HLHTS 484
P+ Y +++ HL S
Sbjct: 556 APSDCTYNILIRAHLGGS 573
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 14/157 (8%)
Query: 230 EKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVI 289
+KA + S+ + GI+ ++ + G C S V +F L +
Sbjct: 471 QKALEIFEKMQKSRMILGIGIYNII-----IHGMCNASKVDDAWSLFCSLS--------V 517
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K + V YN++I +C++ L +M++ GC P TYN ++
Sbjct: 518 KGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVIS 577
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
+ EL+EEM R DA T ++ +V G+ D F
Sbjct: 578 SVELIEEMKMRGFAADASTIKMVVVMLSD-GRLDKTF 613
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 79/178 (44%), Gaps = 1/178 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ CR+ +L+ M G P +TYN +L LCK + + E+ + M
Sbjct: 543 YNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMT 602
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C P+ ITY I C K + A + +M +GL P + + I G+ +
Sbjct: 603 EKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLD 662
Query: 419 DAYKYVVLSADKYK-SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
AY +Y S + Y+++ S + N MA + SEM KNG P+ YR
Sbjct: 663 GAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYR 720
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 87/175 (49%), Gaps = 4/175 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LIK +C++ L+ EM + GC+P TYN ++ LCK G +DA L+ + +
Sbjct: 473 YNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAI 532
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C PD TY + CR K D A N+M +G+ P + T+ + G + E
Sbjct: 533 TKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSE 592
Query: 419 DAYKYVVLSADKYKSSSNMLY-SLLASL-HDKNNNPVMAKNVLSEMMKNGLRPNV 471
+ + +K + + + Y +++ SL + K N A ++L EM GL P+V
Sbjct: 593 EVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNE--AVDLLGEMKSKGLTPDV 645
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 80/186 (43%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V+ +N L+ +C++ L ++ + G P T+N + LCK G A LL
Sbjct: 295 VTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLG 354
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ PD +TY I CR + A ++MV G +P T+ + I GY
Sbjct: 355 CVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKG 414
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
DA + + + K Y L + ++ +P A V + + GLRP++ VY
Sbjct: 415 MVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYN 474
Query: 476 RVLKHL 481
++K L
Sbjct: 475 TLIKGL 480
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 74/181 (40%)
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P + YN ++ LC+ G A +L+ EM + C PD TY + I C++G A
Sbjct: 465 GLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDA 524
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
+ + +G P + T+ + GY + + A + V + + + Y+ L +
Sbjct: 525 NHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNG 584
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSS 505
K + M + G PN+ Y +++ L S + + A L S L
Sbjct: 585 LCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPD 644
Query: 506 V 506
V
Sbjct: 645 V 645
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 80/189 (42%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
KK E V Y I IK CR LL M +GC + Y V+ + G +
Sbjct: 219 KKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDR 278
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A EL +EML PD T+ + C+ G + F++++KRG+ P L T FI+
Sbjct: 279 ARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQ 338
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
G + A + + + + + Y+ + + + V A+ L +M+ G P
Sbjct: 339 GLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEP 398
Query: 470 NVSVYRRVL 478
N Y ++
Sbjct: 399 NDFTYNSII 407
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 78/183 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+NI I+ +C+ LL + + G P +TYN V+ LC+ + +A E L +M+
Sbjct: 333 FNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMV 392
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ TY I C+ G A V +G +P T+ + + G+ +
Sbjct: 393 NGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPD 452
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A K S ++Y+ L + + A +++EM + G +P++ Y ++
Sbjct: 453 QAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLII 512
Query: 479 KHL 481
L
Sbjct: 513 NGL 515
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 54/136 (39%), Gaps = 1/136 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEM-RQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
V + LI C+ D G L M +Q T TYN ++ + A L
Sbjct: 645 VVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLF 704
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
EM C PD TY + I C+ G + + F + +++G P L T + +
Sbjct: 705 SEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVE 764
Query: 415 YRYEDAYKYVVLSADK 430
++ ++A + L K
Sbjct: 765 HKVQEAVGIIHLMVQK 780
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 11/188 (5%)
Query: 248 KGIWRVVEVLNQVGGSCLVSGV---RALIEMFSVLGLYEMAKYVIKKTERK------VSY 298
K + V++L ++ L V LI F +G + A + + E++ +
Sbjct: 624 KKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTAT 683
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNI+I + + K L EM++ GC+P TY ++ CK G + L E +
Sbjct: 684 YNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENI 743
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT--HAAFIKGYFIFYR 416
+ P T+ + C K A + MV++ + P A KG+ ++
Sbjct: 744 EKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDTVNTIFEADKKGHITYHA 803
Query: 417 YEDAYKYV 424
YE Y V
Sbjct: 804 YEFLYDGV 811
>gi|357161570|ref|XP_003579133.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Brachypodium distachyon]
Length = 721
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 109/247 (44%), Gaps = 44/247 (17%)
Query: 263 SCLVSG---VRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+CL+ G VR ++E ++G+ M K K+SYY ++ +C+ R LL
Sbjct: 235 NCLIKGLCSVRRVVEALEMIGV--MLKNGCPPD--KISYYTVM-SFLCKEKRVSEVRSLL 289
Query: 320 VEMR-QVGCEPITLTYNYVLGVL-----------------------------------CK 343
MR G +TYN ++ VL C
Sbjct: 290 ATMRNDAGLLTDQVTYNMLIHVLAKHGHADEALEFLRESEGKRFRVDEVGYSAVVHSFCL 349
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
NG+ A+A E++ EM+ + CHPD +TY + CR+G+ D A M K G +P + T
Sbjct: 350 NGRMAEAKEIVGEMISKECHPDVVTYSAVVDGFCRIGEIDQARKMMKHMYKNGCKPNIVT 409
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
H A + G + +A++ + S + + + S++ YS++ + + +V+++M+
Sbjct: 410 HTALLNGLCKVGKSSEAWELLNKSGEDWWTPSDITYSVVMHGFRREGKLKESCDVVAQML 469
Query: 464 KNGLRPN 470
+ G P
Sbjct: 470 QKGFFPT 476
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 58/148 (39%), Gaps = 35/148 (23%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y++++ R K D++ +M Q G P T+ N ++ LCK G+ A+A E +E+
Sbjct: 445 YSVVMHGFRREGKLKESCDVVAQMLQKGFFPTTVEINLLIHALCKEGKPAEAKEFMEQCQ 504
Query: 359 GRNC-----------------------------------HPDAITYEIFIVYSCRVGKFD 383
+ C HPD +TY + + R G+
Sbjct: 505 SKGCTINVVNFTTVIHGFSRQGDLESALSLLDDLYLSNRHPDVVTYTVVVNALGRKGRLK 564
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGY 411
A +M+ RGL P L T+ I Y
Sbjct: 565 EATGLVEKMLNRGLVPTLVTYRTVIHRY 592
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/251 (19%), Positives = 93/251 (37%), Gaps = 40/251 (15%)
Query: 268 GVRALIEMFSVLGLYEMAKYVI-----KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
G A++ F + G AK ++ K+ V Y+ ++ CR + R ++ M
Sbjct: 339 GYSAVVHSFCLNGRMAEAKEIVGEMISKECHPDVVTYSAVVDGFCRIGEIDQARKMMKHM 398
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADA-------------------------------- 350
+ GC+P +T+ +L LCK G+ ++A
Sbjct: 399 YKNGCKPNIVTHTALLNGLCKVGKSSEAWELLNKSGEDWWTPSDITYSVVMHGFRREGKL 458
Query: 351 ---CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAF 407
C+++ +ML + P + + I C+ GK A F Q +G +
Sbjct: 459 KESCDVVAQMLQKGFFPTTVEINLLIHALCKEGKPAEAKEFMEQCQSKGCTINVVNFTTV 518
Query: 408 IKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
I G+ E A + + + Y+++ + + A ++ +M+ GL
Sbjct: 519 IHGFSRQGDLESALSLLDDLYLSNRHPDVVTYTVVVNALGRKGRLKEATGLVEKMLNRGL 578
Query: 468 RPNVSVYRRVL 478
P + YR V+
Sbjct: 579 VPTLVTYRTVI 589
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 67/158 (42%), Gaps = 1/158 (0%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
MR+VG EP +TYN ++ LC + +A E++ ML C PD I+Y + + C+ +
Sbjct: 222 MRRVGVEPDVVTYNCLIKGLCSVRRVVEALEMIGVMLKNGCPPDKISYYTVMSFLCKEKR 281
Query: 382 FDVAFNFFNQMV-KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+ M GL T+ I ++A +++ S K + YS
Sbjct: 282 VSEVRSLLATMRNDAGLLTDQVTYNMLIHVLAKHGHADEALEFLRESEGKRFRVDEVGYS 341
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ N AK ++ EM+ P+V Y V+
Sbjct: 342 AVVHSFCLNGRMAEAKEIVGEMISKECHPDVVTYSAVV 379
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 76/176 (43%), Gaps = 6/176 (3%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P +TY V+ L + G+ +A L+E+ML R P +TY I C G + +
Sbjct: 545 PDVVTYTVVVNALGRKGRLKEATGLVEKMLNRGLVPTLVTYRTVIHRYCEKGTVEELVDL 604
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV--VLSADKYKSSSNMLYSLLASLH 446
++M+ R Q + + I+ F + +AY + VL + + + L+ S
Sbjct: 605 LDKMLAR--QELKSVYNQVIEKLCAFGKLNEAYGLLSKVLRTASQRDAQT-CHILMESFL 661
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSL 502
++ + A NV M + L P++ + ++V L ++ A L ++ L
Sbjct: 662 NRGLT-IQAYNVACRMFQRNLIPDLKLCQKVDDRLVLEERKQAAGKLIVKFVERGL 716
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 89/186 (47%), Gaps = 6/186 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI CR + +++ M G +P TYN ++ LCK G+ A A +L EML
Sbjct: 156 YNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEML 215
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD TY +V SCR F A F +M+++G+ P L + ++ I +F R
Sbjct: 216 NIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIA---VFSRNR 272
Query: 419 DAYKYVVLSADKYKSS---SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ +V D K N++Y++L + +N N + A + EM++ G +V Y
Sbjct: 273 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 332
Query: 476 RVLKHL 481
+L L
Sbjct: 333 TILNGL 338
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 84/180 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ LI C+ + L M Q +P + YN ++ CK G+ A EL + M+
Sbjct: 366 FTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMI 425
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R P+ ITY I I C VG AF ++ M+++G++P L T IKGY
Sbjct: 426 SRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSS 485
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A +++ K + ++ Y+ L + + +N A +++M K GL P++ Y V+
Sbjct: 486 KADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVM 545
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 2/173 (1%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
E+ + G E T N ++ LCK+G+ D L EM G + D +TY I CR G
Sbjct: 108 EVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREG 167
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+ AF N M +GL+P L T+ A I G RY A ++ + S Y+
Sbjct: 168 LLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYN 227
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
L + +N AK + EM++ G+ P++ + ++ S H+ + L
Sbjct: 228 TLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVF--SRNRHLDQAL 278
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 74/172 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ILI C L M + G +P +T N V+ C++G + A E L M+
Sbjct: 436 YGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMI 495
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD I+Y I R D AF + N+M K GL P + T+ + G+ R +
Sbjct: 496 AKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQ 555
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
+A + +K + Y+ L + H +N A EM++ G P+
Sbjct: 556 EAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPD 607
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 78/181 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +L+ CR + + EM + GC + YN +L LCK DA +L +EM+
Sbjct: 296 YTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMV 355
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R PD T+ I C+ G A + F M +R ++P + + I G+ E
Sbjct: 356 ERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEME 415
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + + +++ Y +L + + + A + M++ G++P + V+
Sbjct: 416 KASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVI 475
Query: 479 K 479
K
Sbjct: 476 K 476
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 60/150 (40%), Gaps = 35/150 (23%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL--------------- 341
+ YN L+ E CRR +F +++ EM + G P ++++ ++ V
Sbjct: 224 TTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRD 283
Query: 342 --------------------CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
C+NG +A ++ +EML + C D I Y + C+
Sbjct: 284 MKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKM 343
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
A F++MV+RG P T I G+
Sbjct: 344 LTDADKLFDEMVERGALPDFYTFTTLIHGH 373
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%)
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N +LG L K A E+ E++ + T I + C+ GKFD +F ++M
Sbjct: 87 NSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEG 146
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM 454
G+ + T+ I Y E+A++ + ADK S Y+ + + K
Sbjct: 147 NGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYAR 206
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVL 478
AK +L EM+ GL P+ + Y +L
Sbjct: 207 AKGILIEMLNIGLSPDTTTYNTLL 230
>gi|302785562|ref|XP_002974552.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
gi|300157447|gb|EFJ24072.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
Length = 495
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 79/188 (42%), Gaps = 35/188 (18%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I C+ R +L M + GC P +T+N +L LC G+ +A + E M+
Sbjct: 218 YNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMV 277
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
RNC P A+TY + I R + D A ++F M++RG++P + T+ A I G + E
Sbjct: 278 ERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVE 337
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA + +L M G PNV Y RV+
Sbjct: 338 DALE-----------------------------------ILKRMSSTGREPNVVTYTRVI 362
Query: 479 KHLHTSHQ 486
L Q
Sbjct: 363 GALCKGGQ 370
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 3/124 (2%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
+ E V Y LI +C + ++L M G EP +TY V+G LCK GQ
Sbjct: 314 RGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIER 373
Query: 350 ACELLEEMLG---RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAA 406
A +L + +G C PD+ Y + + CR KF A+ +F +MV+ L + + A
Sbjct: 374 ATKLFNDAMGSRTAKCKPDSYAYSTIVYWLCRQSKFLEAYEYFLRMVESKLVAKPHIYKA 433
Query: 407 FIKG 410
G
Sbjct: 434 MADG 437
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 4/205 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+L +C+ + EM + P LTYN +L C+ G+ A LLEEM+
Sbjct: 144 YNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMI 203
Query: 359 ----GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
G + PD +Y I C+ + A +M+K G P + T + G +
Sbjct: 204 EGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLT 263
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ ++A ++ + + Y++L + H + A + +M++ G+ PNV Y
Sbjct: 264 GKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTY 323
Query: 475 RRVLKHLHTSHQEHMAKCLSSRYSS 499
++ L +++ A + R SS
Sbjct: 324 TALIGGLCDANKVEDALEILKRMSS 348
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 1/109 (0%)
Query: 284 MAKYVIKKT-ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLC 342
M +Y++++ E Y +LI R D V+M + G EP TY ++G LC
Sbjct: 272 MFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLC 331
Query: 343 KNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQ 391
+ DA E+L+ M P+ +TY I C+ G+ + A FN
Sbjct: 332 DANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFND 380
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 81/227 (35%), Gaps = 38/227 (16%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
+ V YN + + + R + +M C P TY VL LC + + A E
Sbjct: 34 QHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAALE 93
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF------------------------ 388
LL++M + P + + C+ GK D A+
Sbjct: 94 LLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSDECSLDRISYNMLTYGLCK 153
Query: 389 ----------FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS--- 435
F +M + + P L T+ + GY R E A + + K S
Sbjct: 154 ADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVP 213
Query: 436 NML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+M Y+ + S K A+ VL M+K+G PNV + +L L
Sbjct: 214 DMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGL 260
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 34/77 (44%)
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
RQ + TYN L L K G + A ++ ++ML + C P+ TY I + C K
Sbjct: 29 RQEDFQHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKT 88
Query: 383 DVAFNFFNQMVKRGLQP 399
D A M + L P
Sbjct: 89 DAALELLQDMESKMLTP 105
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 101/234 (43%), Gaps = 5/234 (2%)
Query: 271 ALIEMFSVLGLYEMAKYVIKK-----TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
L+ F+ LG + K K V YNI+I MC+ D + R L EM+
Sbjct: 232 GLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFR 291
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P T+TYN ++ K G+ D EEM C PD ITY I C+ GK +
Sbjct: 292 GLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIG 351
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
F+ +M GL+P + +++ + + + A K+ V + Y+ L
Sbjct: 352 LEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDA 411
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSS 499
+ K N A + +EM++ G+ NV Y ++ L + + A+ L + +
Sbjct: 412 NCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDT 465
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 64/154 (41%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M++ P T + N +L K G+ D ++M+G P TY I I C+ G
Sbjct: 217 KMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEG 276
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+ A F +M RGL P T+ + I G+ R +D + D + Y+
Sbjct: 277 DVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYN 336
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
L + K + EM NGL+PNV Y
Sbjct: 337 ALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSY 370
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 2/200 (1%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V YN LI C+ + EM+ G +P ++Y+ ++ CK G A +
Sbjct: 329 EPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIK 388
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+M P+ TY I +C++G AF N+M++ G++ + T+ A I G
Sbjct: 389 FYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLC 448
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
R ++A + + D N+ Y+ L K N A +L+E+ G++P++
Sbjct: 449 DAERMKEA-EELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDL 507
Query: 472 SVYRRVLKHLHTSHQEHMAK 491
+Y + L + + AK
Sbjct: 508 LLYGTFIWGLCSLEKIEAAK 527
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 76/183 (41%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ L+ C+ + V+MR+VG P TY ++ CK G +DA L
Sbjct: 367 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 426
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EML + +TY I C + A F +M G+ P LA++ A I G+
Sbjct: 427 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 486
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ A + + + +LY AK V++EM + G++ N +Y
Sbjct: 487 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYT 546
Query: 476 RVL 478
++
Sbjct: 547 TLM 549
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 50/121 (41%)
Query: 292 TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADAC 351
E V Y LI +C K +L +M G P +YN ++ K A
Sbjct: 433 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 492
Query: 352 ELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
ELL E+ GR PD + Y FI C + K + A N+M + G++ + + Y
Sbjct: 493 ELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAY 552
Query: 412 F 412
F
Sbjct: 553 F 553
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 79/194 (40%), Gaps = 1/194 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y I +C + + ++ EM++ G + +L Y ++ K+G + LL+EM
Sbjct: 510 YGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMK 569
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR-GLQPRLATHAAFIKGYFIFYRY 417
+ +T+ + I C+ A ++FN++ GLQ A A I G +
Sbjct: 570 ELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQV 629
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
E A K Y+ L + K N + A + +M + G++ ++ Y +
Sbjct: 630 EAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSL 689
Query: 478 LKHLHTSHQEHMAK 491
+ L +Q A+
Sbjct: 690 VWGLSHCNQLQKAR 703
>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 88/180 (48%), Gaps = 1/180 (0%)
Query: 300 NILIKEMCRRCD-FKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
N+LIK +C+ ++ EM + GC+P + TY ++ LCK G+ +A EL +EM
Sbjct: 159 NVLIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMD 218
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C P +TY + C+ G D A F++M K+ ++P + T+++ + G
Sbjct: 219 TKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSL 278
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + + + K + + YS L + K A L M GL+P+ +Y +++
Sbjct: 279 EAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKII 338
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 88/189 (46%), Gaps = 9/189 (4%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
LI LG AK + K+ + K V Y+ L+ +C+ + L +M++
Sbjct: 196 TLINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKK 255
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
EP TY+ ++ LCKNG +A ELLE M+ + P+ +TY I C+ GK A
Sbjct: 256 AIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEA 315
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
++M +GL+P + I G+ ++++A Y+ S + + + SL
Sbjct: 316 VETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQISPNRVTW----SL 371
Query: 446 HDKNNNPVM 454
H K NN V+
Sbjct: 372 HVKLNNMVV 380
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 56/136 (41%), Gaps = 7/136 (5%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY-------NYVLGVLCKNGQDADAC 351
Y +I C F+ L EM P +T+ N V+ LC NG +
Sbjct: 334 YGKIINGFCNIRKFQEAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSF 393
Query: 352 ELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
+L M R DA T++ + C+ G A F++MV G P +A + G+
Sbjct: 394 QLYIGMRTRGISIDAGTFDSLVKCFCKKGDLHKAARIFDEMVLDGCVPDHGIWSAVVGGF 453
Query: 412 FIFYRYEDAYKYVVLS 427
+ + +A++ +V+
Sbjct: 454 WDRRKVREAFESIVVE 469
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 1/184 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C+ DLL EM GC P TY ++ CK+ + DA + E+++
Sbjct: 57 YNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLV 116
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG-LQPRLATHAAFIKGYFIFYRY 417
R PD +TY I C+ G+ A + F +M+K G P T+ + I G+ +
Sbjct: 117 ARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKM 176
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
++A + A+ S + Y+ L + K A ++L++M + GL PNV + +
Sbjct: 177 DEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSL 236
Query: 478 LKHL 481
+ L
Sbjct: 237 MDGL 240
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 72/146 (49%), Gaps = 3/146 (2%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVG-CEPITLTYNYVLGVLCKNGQDADACELL 354
V Y+ LI +C+ K DL M + G C P T+TYN ++ C+ G+ +A LL
Sbjct: 124 VVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLL 183
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
E M PD +TY + C++ + D A++ NQM ++GL P + T + + G
Sbjct: 184 ERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRE 243
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYS 440
R DA +L + KS S +Y+
Sbjct: 244 NRLSDAVH--ILGEMRRKSCSPTVYT 267
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 72/150 (48%), Gaps = 7/150 (4%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P +TYN ++ LCK + ++A +LLEEM+ C PD TY I C+ K D A
Sbjct: 52 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM----LYSLLAS 444
F Q+V RG +P + T++ I G R ++A + L KS S M Y+ L S
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEA---IDLFGRMIKSGSCMPNTVTYNSLIS 168
Query: 445 LHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ A N+L M + G P+V Y
Sbjct: 169 GFCRMGKMDEAMNLLERMAETGSSPDVVTY 198
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 4/184 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI CR +LL M + G P +TY ++ CK + DA +LL +M
Sbjct: 163 YNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMT 222
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+ +T+ + CR + A + +M ++ P + T+ + GY + E
Sbjct: 223 RKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLE 282
Query: 419 DAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+A K+++ D N++ ++++ K N A ++ E + P+V +Y V
Sbjct: 283 EARKFMLEEMD---CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTV 339
Query: 478 LKHL 481
+ L
Sbjct: 340 IDVL 343
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 8/129 (6%)
Query: 285 AKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
A +++ + RK V YN ++ CR + R ++E ++ C P +++N ++
Sbjct: 249 AVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLE--EMDCPPNVVSFNIMIR 306
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR-GLQ 398
LCK + ++A EL+EE R C+PD + Y I CR K D A + +M++ G
Sbjct: 307 GLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEEPGCL 366
Query: 399 PRLATHAAF 407
P T++ F
Sbjct: 367 PNSITYSTF 375
>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 84/183 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI E C + EMR+ G +TYN ++G LC+ + +A +L+ ++
Sbjct: 266 YNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVN 325
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ +TY I I C V K D A FNQ+ GL P L T+ I GY
Sbjct: 326 KVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLA 385
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A V ++ + S + Y++L + N+ A + S M K+GL P+V Y +L
Sbjct: 386 GALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLL 445
Query: 479 KHL 481
L
Sbjct: 446 HGL 448
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 83/176 (47%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNILI C L +++ G P +TYN ++ K A A +L++EM
Sbjct: 336 YNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEME 395
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R P +TY I I R+ + A + M K GL P + T++ + G + +
Sbjct: 396 ERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMK 455
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+A K + + ++++Y+ + + K + A +L+EM+++G+ PNV+ +
Sbjct: 456 EASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASF 511
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 77/186 (41%), Gaps = 10/186 (5%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI + + G DL+ EM + P +TY ++ + ACE+ M
Sbjct: 371 YNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLME 430
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD TY + + C G A F + + LQP + I GY +
Sbjct: 431 KSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYC-----K 485
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLA-----SLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
+ Y L S M+ ++ + L ++ A+ +L +M+ +GL+P+VS+
Sbjct: 486 EGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSL 545
Query: 474 YRRVLK 479
Y+ V K
Sbjct: 546 YKMVHK 551
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M++ G P YN ++ C +G A ++ EM + +TY I I CR K
Sbjct: 254 MKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKK 313
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
F A +++ K GL P + T+ I G+ + + A + S + + Y+
Sbjct: 314 FGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNT 373
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
L + + K N A +++ EM + + P+ Y
Sbjct: 374 LIAGYSKVENLAGALDLVKEMEERCIAPSKVTY 406
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++L+ +C + K L + ++ +P ++ YN ++ CK G A LL
Sbjct: 438 VYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLN 497
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLA 402
EM+ P+ ++ I CR K+ A QM+ GL+P ++
Sbjct: 498 EMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVS 544
>gi|302759663|ref|XP_002963254.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
gi|300168522|gb|EFJ35125.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
Length = 495
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 79/188 (42%), Gaps = 35/188 (18%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I C+ R +L M + GC P +T+N +L LC G+ +A + E M+
Sbjct: 218 YNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMV 277
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
RNC P A+TY + I R + D A ++F M++RG++P + T+ A I G + E
Sbjct: 278 ERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVE 337
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA + +L M G PNV Y RV+
Sbjct: 338 DALE-----------------------------------ILKRMSSTGREPNVVTYTRVI 362
Query: 479 KHLHTSHQ 486
L Q
Sbjct: 363 GALCKGGQ 370
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 57/124 (45%), Gaps = 3/124 (2%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
+ E V Y LI +C + ++L M G EP +TY V+G LCK GQ
Sbjct: 314 RGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIER 373
Query: 350 ACELLEEMLG---RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAA 406
A +L + +G C PD+ Y I + CR KF A+ +F +MV+ L + + A
Sbjct: 374 ATKLFNDAMGSRTAKCKPDSYAYSTIIYWLCRQSKFLEAYEYFLRMVESKLVAKPHIYKA 433
Query: 407 FIKG 410
G
Sbjct: 434 MADG 437
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 4/205 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+L +C+ + EM + P LTYN +L C+ G+ A LLEEM+
Sbjct: 144 YNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMI 203
Query: 359 ----GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
G + PD +Y I C+ + A +M+K G P + T + G +
Sbjct: 204 EGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLT 263
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ ++A ++ + + Y++L + H + A + +M++ G+ PNV Y
Sbjct: 264 GKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTY 323
Query: 475 RRVLKHLHTSHQEHMAKCLSSRYSS 499
++ L +++ A + R SS
Sbjct: 324 TALIGGLCDANKVEDALEILKRMSS 348
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 1/109 (0%)
Query: 284 MAKYVIKKT-ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLC 342
M +Y++++ E Y +LI R D V+M + G EP TY ++G LC
Sbjct: 272 MFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLC 331
Query: 343 KNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQ 391
+ DA E+L+ M P+ +TY I C+ G+ + A FN
Sbjct: 332 DANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFND 380
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 81/227 (35%), Gaps = 38/227 (16%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V YN + + + R + +M C P TY VL LC + + A E
Sbjct: 34 EHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAALE 93
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF------------------------ 388
LL++M + P + + C+ GK D A+
Sbjct: 94 LLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSDECSLDRISYNMLTYGLCK 153
Query: 389 ----------FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS--- 435
F +M + + P L T+ + GY R E A + + K S
Sbjct: 154 ADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVP 213
Query: 436 NML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+M Y+ + S K A+ VL M+K+G PNV + +L L
Sbjct: 214 DMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGL 260
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 34/77 (44%)
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
RQ E TYN L L K G + A ++ ++ML + C P+ TY I + C K
Sbjct: 29 RQEDFEHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKT 88
Query: 383 DVAFNFFNQMVKRGLQP 399
D A M + L P
Sbjct: 89 DAALELLQDMESKMLTP 105
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 96/200 (48%), Gaps = 1/200 (0%)
Query: 283 EMAKYVIKKTERKVSY-YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
E+ K ++K + S+ YN LI CR + +EM GC P +TYN ++ L
Sbjct: 460 EVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGL 519
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
CK + +A L +EML R PD TY I CR K DVA +++++ GLQ +
Sbjct: 520 CKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDV 579
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
H I G + ++A+ + +K S + + Y+ L + + A ++ +
Sbjct: 580 MVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTA 639
Query: 462 MMKNGLRPNVSVYRRVLKHL 481
++ NGL+P++ Y +K L
Sbjct: 640 ILDNGLKPDIVTYNTRIKGL 659
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 98/192 (51%), Gaps = 3/192 (1%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
++ + YNI+++ +C R D L +R+ G P +TY+ ++ L K+ Q +
Sbjct: 152 RRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDN 211
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR-GLQPRLATHAAFI 408
A +LL+EM DA+ Y + R G F+ A + Q+V+ G P LAT+ +
Sbjct: 212 ALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVML 271
Query: 409 KGYFIFYRYEDAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
G R+++A + + + A+ +++ + + Y +L ++ + A V S+M+K GL
Sbjct: 272 DGLCKLGRFKEAGEVWSRMMANNHQADT-VTYGILIHGLCRSGDVDSAARVYSDMVKAGL 330
Query: 468 RPNVSVYRRVLK 479
+VSVY ++K
Sbjct: 331 VLDVSVYNSLIK 342
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 123/279 (44%), Gaps = 31/279 (11%)
Query: 172 SEKVSALCFLKYMREIMPE--FYKNSDICSLVIDNCG------RLDDYETMRQLLNDFNV 223
SE + + + R +MP+ D+ SL+ N G LD + R+ +D +
Sbjct: 82 SESAALVVLSAFSRALMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRY-SDADA 140
Query: 224 YQVCLNEKAFG--FLPVL----ISSKALTKKG-IWRVVEVL----------NQVGGSCLV 266
+ L+ AFG P L I ++L +G + R V + ++V S L+
Sbjct: 141 FFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLM 200
Query: 267 SGVRALIEMFSVLGLY-EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM-RQ 324
SG+ ++ + L L EM Y ++ YN L+ R F+ + ++ R
Sbjct: 201 SGLAKHDQLDNALDLLDEMPNYGVQA---DAVCYNALLSGCFRTGMFEKAMKVWEQLVRD 257
Query: 325 VGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
G P TY +L LCK G+ +A E+ M+ N D +TY I I CR G D
Sbjct: 258 PGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDS 317
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY 423
A ++ MVK GL ++ + + IKG+ R +A+K+
Sbjct: 318 AARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKF 356
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 58/118 (49%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V Y+ +I C+ ++ M + GC+P + YN ++ C+ + DA +
Sbjct: 436 ELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIK 495
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ EM C P ITY I C+ K+ A + +M++RG +P + T+A+ I+G
Sbjct: 496 IYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRG 553
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 98/222 (44%), Gaps = 10/222 (4%)
Query: 280 GLYEMAKYVIKKTERKVS------YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLT 333
G+ A ++K+ E S + LI +C ++L + R G E +
Sbjct: 382 GMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFS 441
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
Y+ ++ CK+G+ DA E+ + M+ C P++ Y I CRV K + A + +M
Sbjct: 442 YSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMT 501
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADK-YKSSSNMLYSLLASL-HDKNNN 451
G P + T+ I G +Y++A ++ +K SL+ L DK +
Sbjct: 502 SNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVD 561
Query: 452 PVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
+A + E++ GL+ +V V+ ++ L ++ + A C+
Sbjct: 562 --VALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCI 601
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 5/162 (3%)
Query: 325 VGCEPITLTYNYVLG--VLCKNGQDADA--CELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+GC P ++N +L V + DADA L GR P+ TY I + C G
Sbjct: 113 LGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARG 172
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
D A + F+ + +RG+ P T++ + G + ++A + + + + Y+
Sbjct: 173 DVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYN 232
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKN-GLRPNVSVYRRVLKHL 481
L S + A V +++++ G PN++ Y+ +L L
Sbjct: 233 ALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGL 274
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 83/222 (37%), Gaps = 37/222 (16%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
VS YN LIK C G IT TYN + L +G ++A ELL+
Sbjct: 334 VSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQIT-TYNIMTKGLLDSGMVSEATELLK 392
Query: 356 EMLGR-NCHPDAITYEIFI---------------------------VYS--------CRV 379
++ +C PD +T+ I V+S C+
Sbjct: 393 QLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKD 452
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
G+ A + MVK G +P + A I G+ + DA K + + + Y
Sbjct: 453 GRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITY 512
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ L K A ++ EM++ G +P++ Y +++ L
Sbjct: 513 NTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGL 554
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +NILI +C + +EM++ C P +TYN ++ + G A L
Sbjct: 579 VMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWT 638
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+L PD +TY I C + N+++ G+ P + T + ++
Sbjct: 639 AILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRA 693
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 61/137 (44%), Gaps = 7/137 (5%)
Query: 280 GLYEMAKYVIKKTERK------VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLT 333
G++E A V ++ R ++ Y +++ +C+ FK ++ M + T+T
Sbjct: 242 GMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVT 301
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
Y ++ LC++G A + +M+ D Y I C VG+ A+ F++
Sbjct: 302 YGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTG 361
Query: 394 KRGLQPRLATHAAFIKG 410
G++ ++ T+ KG
Sbjct: 362 FSGIR-QITTYNIMTKG 377
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 81/180 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN++I +CR K ++L EM G P +TYN +L CK G A + EM+
Sbjct: 287 YNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMV 346
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P +TY I C+ + A FF+QM RGL+P T+ I G+
Sbjct: 347 RNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLN 406
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+AY+ + + S S + Y+ H A V+ EM++ GL P+V Y ++
Sbjct: 407 EAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTII 466
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 110/253 (43%), Gaps = 15/253 (5%)
Query: 230 EKAFGFLPVLISSKALTKKGIWRVVEVLNQV-GGSCLVSGVRALIEMFSVLGLYEMAKYV 288
++AFG L K+++ KG+ + N + G C ++ E+ +G
Sbjct: 266 DEAFGLL------KSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGF---- 315
Query: 289 IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
T +V+Y N L+ C+ +F + EM + G P +TY ++ +CK
Sbjct: 316 ---TPDEVTY-NTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLN 371
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
A E ++M R P+ TY I R G + A+ N+M + G P + T+ AFI
Sbjct: 372 RAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFI 431
Query: 409 KGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLR 468
G+ + R E+A V +K + + YS + S + A + EM++ G+
Sbjct: 432 HGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVS 491
Query: 469 PNVSVYRRVLKHL 481
P+ Y +++ L
Sbjct: 492 PDAVTYSSLIQGL 504
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 6/187 (3%)
Query: 229 NEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYV 288
NE+ + L S + L + +R++ + + G S V A I VL E A V
Sbjct: 388 NERTYTTLIDGFSRQGLLNEA-YRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGV 446
Query: 289 IKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
+++ K V Y+ +I CR+ + + EM + G P +TY+ ++ LC+
Sbjct: 447 VQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCE 506
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
+ +AC+L +EML PD TY I C G + A + ++M+ +G P T
Sbjct: 507 MRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVT 566
Query: 404 HAAFIKG 410
++ I G
Sbjct: 567 YSVLING 573
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 110/277 (39%), Gaps = 11/277 (3%)
Query: 220 DFNVYQVCLNE--KAFGFLPVLISSKALTKKGIW-RVVEVLNQVGGSCLVSGVRALIEMF 276
D Y LN K F L+ + + G+ VV + C + +E F
Sbjct: 318 DEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFF 377
Query: 277 SVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNY 336
+M ++ ER Y LI R+ +L EM + G P +TYN
Sbjct: 378 D-----QMRIRGLRPNERT---YTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNA 429
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
+ C + +A +++EM+ + PD ++Y I CR G+ D AF +MV++G
Sbjct: 430 FIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKG 489
Query: 397 LQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAK 456
+ P T+++ I+G R +A D Y+ L + + + A
Sbjct: 490 VSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKAL 549
Query: 457 NVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
++ EM+ G P+ Y ++ L+ + AK L
Sbjct: 550 HLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRL 586
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 72/158 (45%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
EM + P TYN ++ C G+ EM C P+ +TY I C++G
Sbjct: 204 EMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMG 263
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+ D AF M +G+QP L ++ I G ++A++ + K + + Y+
Sbjct: 264 RIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYN 323
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
L + + K N A + +EM++NG+ P+V Y ++
Sbjct: 324 TLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALI 361
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 77/187 (41%), Gaps = 15/187 (8%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL---------------GVLCK 343
Y++LI + ++ + + LL ++ P +TY+ ++ C
Sbjct: 567 YSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCM 626
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
G +A + E M+ RN P Y + I CR G AFN + +M+ G P T
Sbjct: 627 KGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVT 686
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
IK F E+ + + + + + L +L ++ K N NVL++M
Sbjct: 687 VITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEGNMEAVLNVLTDMA 746
Query: 464 KNGLRPN 470
K+GL PN
Sbjct: 747 KDGLLPN 753
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 101/218 (46%), Gaps = 4/218 (1%)
Query: 258 NQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRD 317
N V + ++ G+ E+ G+++ K V K + YN +I +C+
Sbjct: 259 NNVTYNTIIDGLCKAQEVDMAEGVFQ--KMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEG 316
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE-LLEEMLGRNCHPDAITYEIFIVYS 376
+ +M G +P +TYN ++ LCK Q D E + ++M+ + PD +TY I I
Sbjct: 317 VFQQMIDRGVKPDHVTYNTIIDGLCK-AQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGL 375
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
C+ D A F QM+ +G++P T+ I GY ++E+ + + +
Sbjct: 376 CKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDV 435
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
Y LL KN A+++ M++ G++P+V++Y
Sbjct: 436 FTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIY 473
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 90/198 (45%), Gaps = 3/198 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE-LL 354
V YN +I +C+ + D+ +M + G +P +TYN ++ LCK Q+ D E +
Sbjct: 225 VVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCK-AQEVDMAEGVF 283
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
++M+ + P +TY I C+ D A F QM+ RG++P T+ I G
Sbjct: 284 QKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKA 343
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ A DK N+ Y+++ K + A+ V +M+ G++PN Y
Sbjct: 344 QAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTY 403
Query: 475 RRVLK-HLHTSHQEHMAK 491
++ +L T E + +
Sbjct: 404 NCLIHGYLSTGQWEEVVQ 421
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 83/183 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y I+I +C+ + +M G +P TYN ++ GQ + + ++EM
Sbjct: 368 YTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMS 427
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD TY + + Y C+ GK + A + F+ M+++G++P + + + GY
Sbjct: 428 AHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALS 487
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ + + L S ++ +++ + + K ++ +M + GL PNV Y ++
Sbjct: 488 EMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLI 547
Query: 479 KHL 481
L
Sbjct: 548 DAL 550
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N L+ +C ++ +L +EM G P + +N VL LCK G+ +A L++ M+
Sbjct: 578 FNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMV 637
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD I+Y I C + D A + MV GL+P + ++ + GY R +
Sbjct: 638 CMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRID 697
Query: 419 DAY 421
+AY
Sbjct: 698 NAY 700
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 87/189 (46%), Gaps = 8/189 (4%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
G C V + E+F EM I+ + ++N ++ +C+ R L+
Sbjct: 584 GLCTVDKWEKVEELF-----LEMLNQGIRP---DIVFFNTVLCNLCKEGRVMEARRLIDS 635
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M +G +P ++YN ++ C + +A +LL+ M+ P+ ++Y + C+ G+
Sbjct: 636 MVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGR 695
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
D A+ F +M+++G+ P + T+ + G F R+ +A + V K S YS+
Sbjct: 696 IDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSI 755
Query: 442 LASLHDKNN 450
+ KNN
Sbjct: 756 ILDGFCKNN 764
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 114/238 (47%), Gaps = 24/238 (10%)
Query: 258 NQVGGSCLVSGVRALIEMFSVLGLYEM---AKYVIKKTERKVSYYNILIKEMCRR-CDFK 313
N+V C + +I F +G E+ A +I KT +V +I++ ++ + CD K
Sbjct: 78 NKVAPDCCTYSI--VIGCFCRIGRLELGFAAFGLILKTGWRVD--DIVVNQLLKGLCDTK 133
Query: 314 GPRD----LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML-GRN--CHPDA 366
+ LL +M +VGC ++YN +L LC + +A ELL M+ G++ C PD
Sbjct: 134 RVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDV 193
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI---FYRYEDAYKY 423
++Y I I G+ D A++ F +M G+ P + T+ I G R ED ++
Sbjct: 194 VSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQ 250
Query: 424 VVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+V +K +N+ Y+ + K MA+ V +M+ G++P+ Y ++ L
Sbjct: 251 MV---EKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGL 305
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 80/186 (43%), Gaps = 3/186 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YNI+I L +EM G P +TYN ++ LCK + A ++ +
Sbjct: 193 VVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQ 249
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M+ + P+ +TY I C+ + D+A F +MV +G++P T+ I G
Sbjct: 250 QMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQ 309
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ A D+ ++ Y+ + K A+ V +M+ G++P+ Y
Sbjct: 310 AVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYT 369
Query: 476 RVLKHL 481
++ L
Sbjct: 370 IIIDGL 375
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 85/211 (40%), Gaps = 1/211 (0%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K + V+ Y I++ ++ DLL M G P +N V+ K +
Sbjct: 464 KGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDE 523
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
+ +M + P+ +TY I C++G+ D A FNQM+ G+ P + +
Sbjct: 524 VMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVY 583
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
G ++E + + ++ + ++ + K + A+ ++ M+ GL+P
Sbjct: 584 GLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKP 643
Query: 470 NVSVYRRVLK-HLHTSHQEHMAKCLSSRYSS 499
+V Y ++ H S + K L S+
Sbjct: 644 DVISYNTLIDGHCFASRMDEAVKLLDGMVSA 674
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 73/183 (39%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ C+ L EM + G P TYN +L L ++G+ ++A EL M+
Sbjct: 683 YNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMI 742
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
TY I + C+ FD AF F + LQ + T I G F R E
Sbjct: 743 KSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKE 802
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA S + Y L+A + + + S M K+G PN + ++
Sbjct: 803 DAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALI 862
Query: 479 KHL 481
+ L
Sbjct: 863 RKL 865
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 80/197 (40%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI C LL M G +P ++YN +L CK G+ +A L EML
Sbjct: 648 YNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREML 707
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P TY + R G+F A + M+K + T++ + G+ ++
Sbjct: 708 RKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFD 767
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A+K + ++++ K A ++ + + NGL P+V YR +
Sbjct: 768 EAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIA 827
Query: 479 KHLHTSHQEHMAKCLSS 495
++L CL S
Sbjct: 828 ENLIEEGSLEELDCLFS 844
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 87/215 (40%), Gaps = 5/215 (2%)
Query: 272 LIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI + G +E IK+ E V Y +L+ +C+ R L M + G
Sbjct: 406 LIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKG 465
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
+P Y +L K G ++ +LL M+ P+ + I + D
Sbjct: 466 IKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVM 525
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
+ F +M ++GL P + T+ I R +DA ++ + +N++++ L
Sbjct: 526 HIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGL 585
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + + EM+ G+RP++ + VL +L
Sbjct: 586 CTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNL 620
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 5/216 (2%)
Query: 271 ALIEMFSVLGLYEMAKYVIKK-----TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
L+ F+ LG + K K V YNI+I MC+ D + R L EM+
Sbjct: 100 GLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFR 159
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P T+TYN ++ K G+ D EEM C PD ITY I C+ GK +
Sbjct: 160 GLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIG 219
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
F+ +M GL+P + +++ + + + A K+ V + Y+ L
Sbjct: 220 LEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDA 279
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ K N A + +EM++ G+ NV Y ++ L
Sbjct: 280 NCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGL 315
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 64/154 (41%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M++ P T + N +L K G+ D ++M+G P TY I I C+ G
Sbjct: 85 KMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEG 144
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+ A F +M RGL P T+ + I G+ R +D + D + Y+
Sbjct: 145 DVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYN 204
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
L + K + EM NGL+PNV Y
Sbjct: 205 ALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSY 238
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 82/183 (44%), Gaps = 2/183 (1%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V YN LI C+ + EM+ G +P ++Y+ ++ CK G A +
Sbjct: 197 EPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIK 256
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+M P+ TY I +C++G AF N+M++ G++ + T+ A I G
Sbjct: 257 FYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLC 316
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
R ++A + + D N+ Y+ L K N A +L+E+ G++P++
Sbjct: 317 DAERMKEA-EELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDL 375
Query: 472 SVY 474
+Y
Sbjct: 376 LLY 378
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 79/187 (42%), Gaps = 8/187 (4%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ L+ C+ + V+MR+VG P TY ++ CK G +DA L
Sbjct: 235 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 294
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EML + +TY I C + A F +M G+ P LA++ A I G+
Sbjct: 295 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 354
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSL----LASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
+ A + + + +LY L SL AK V++EM + G++ N
Sbjct: 355 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIE----AAKVVMNEMKECGIKANS 410
Query: 472 SVYRRVL 478
+Y ++
Sbjct: 411 LIYTTLM 417
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V Y LI +C K +L +M G P +YN ++ K A E
Sbjct: 302 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALE 361
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
LL E+ GR PD + Y FI C + K + A N+M + G++ + + YF
Sbjct: 362 LLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF 421
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 79/194 (40%), Gaps = 1/194 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y I +C + + ++ EM++ G + +L Y ++ K+G + LL+EM
Sbjct: 378 YGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMK 437
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR-GLQPRLATHAAFIKGYFIFYRY 417
+ +T+ + I C+ A ++FN++ GLQ A A I G +
Sbjct: 438 ELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQV 497
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
E A K Y+ L + K N + A + +M + G++ ++ Y +
Sbjct: 498 EAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSL 557
Query: 478 LKHLHTSHQEHMAK 491
+ L +Q A+
Sbjct: 558 VWGLSHCNQLQKAR 571
>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 616
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 122/297 (41%), Gaps = 12/297 (4%)
Query: 211 YETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGV- 269
+E LL + L++ F L L RV+E+L Q+ + V
Sbjct: 309 WEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVD----RVIELLEQMLEHGCIPDVI 364
Query: 270 --RALIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
+I F GL + A ++K + Y I++K +CR + ++L+ M
Sbjct: 365 TYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHM 424
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
Q GC P +T+N ++ +CK G A ELL++ML C PD I+Y I + GK
Sbjct: 425 IQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 484
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
+ A N M+ +G+ P +++ R + + D S LY+ +
Sbjct: 485 EEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAV 544
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSS 499
S K A + + M+ NG PN S Y +++ L + A+ L S S
Sbjct: 545 ISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCS 601
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 3/210 (1%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L M Y +K V YN ++K +C ++ DLL EM Q C +T+N ++
Sbjct: 281 LSRMPSYGLKP---NVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDF 337
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
C+NG ELLE+ML C PD ITY I C+ G D A M G +P
Sbjct: 338 FCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPN 397
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
++ +KG R+ DA + + + + + ++ L + K A +L
Sbjct: 398 TISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLK 457
Query: 461 EMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
+M+ NG P++ Y V+ L + + A
Sbjct: 458 QMLVNGCSPDLISYSTVIDGLGKAGKTEEA 487
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 118/272 (43%), Gaps = 34/272 (12%)
Query: 225 QVCLNE--------KAFGFLPVLISSKALTKKGI-----WRVVEVLNQVGGSCLVSGVRA 271
Q C++E +FG P ++S A+ K G+ W VE L
Sbjct: 191 QGCVDEGVELLRKLPSFGCEPDIVSYNAVLK-GLCMAKRWDDVEEL-------------- 235
Query: 272 LIEMFSV-LGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPI 330
++EM V L +M ++ R Y +I +C+ + D+L M G +P
Sbjct: 236 MVEMVRVHEALSQMPEHGCTPDLR---MYATIIDGICKDGHHEVANDILSRMPSYGLKPN 292
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN 390
+ YN VL LC + +A +LL EM +C D +T+ I + + C+ G D
Sbjct: 293 VVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLE 352
Query: 391 QMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV-LSADKYKSSSNMLYSLLASLHDKN 449
QM++ G P + T+ I G+ ++A + +SA K ++ + Y+++ +
Sbjct: 353 QMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNT-ISYTIVLKGLCRA 411
Query: 450 NNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
V A+ ++S M++ G PN + ++ +
Sbjct: 412 ERWVDAQELISHMIQQGCLPNPVTFNTLINFM 443
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 89/205 (43%), Gaps = 11/205 (5%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
+Y+ I ++ +C R +L EM GC + +L C+ G A L+
Sbjct: 110 TYFPI-VRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQV 168
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
+ + C D+ + + C G D ++ G +P + ++ A +KG + R
Sbjct: 169 LHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKR 228
Query: 417 YEDAYKYVVLSADKYKSSSNM----------LYSLLASLHDKNNNPVMAKNVLSEMMKNG 466
++D + +V +++ S M +Y+ + K+ + +A ++LS M G
Sbjct: 229 WDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYG 288
Query: 467 LRPNVSVYRRVLKHLHTSHQEHMAK 491
L+PNV Y VLK L ++ + A+
Sbjct: 289 LKPNVVCYNTVLKGLCSAERWEEAE 313
>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
Length = 480
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 2/190 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ +++ C+ + D+ EM GCEP + +N +L L + + +A EL M
Sbjct: 136 YSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMN 195
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R C PD +TY I C+ K D A +M + + P T+ I F R +
Sbjct: 196 SRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQ 255
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHD--KNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
AY+ A+ + YS+L ++ K P AK + EM G+ P V Y
Sbjct: 256 QAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNT 315
Query: 477 VLKHLHTSHQ 486
+L+ L ++ +
Sbjct: 316 LLEGLLSTAK 325
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 91/234 (38%), Gaps = 37/234 (15%)
Query: 285 AKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKN 344
A+ K E + +N+L+ + R R+L M GC+P +TYN ++ LCK
Sbjct: 157 AEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKW 216
Query: 345 GQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK---------- 394
+ +A LLE M + P +TY I + C+ + A+ F +M +
Sbjct: 217 KKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAY 276
Query: 395 ---------------------------RGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLS 427
RG+ P + T+ ++G + +DA +
Sbjct: 277 SVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFM 336
Query: 428 ADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
D+ + + Y +L S K + A +LS M G P++ ++ +L L
Sbjct: 337 LDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRL 390
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 8/197 (4%)
Query: 301 ILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGR 360
ILI +C+ +++ EMR G P +TYN +L L + DA EL ML +
Sbjct: 280 ILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQ 339
Query: 361 NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
P+ TYEI I C+ + + AF + M +G P L + R +DA
Sbjct: 340 VPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDA 399
Query: 421 YKYVV----LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
++ ++ + SSN+L + + + AK+ L +M G+ P+ Y +
Sbjct: 400 FELYKEMSRINCQQLVGSSNILLDGIL----RRGSVDEAKDFLKQMTDTGIVPDKFTYDK 455
Query: 477 VLKHLHTSHQEHMAKCL 493
++ L + A+ L
Sbjct: 456 LVVGLCWQGKADQARKL 472
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 53/126 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ILI +C+ + LL MR G P + +L L + G+ DA EL +EM
Sbjct: 348 YEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMS 407
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
NC + I + R G D A +F QM G+ P T+ + G + +
Sbjct: 408 RINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKAD 467
Query: 419 DAYKYV 424
A K V
Sbjct: 468 QARKLV 473
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 72/176 (40%), Gaps = 1/176 (0%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
++ EM+ G P ++ ++ K+G C L+ ML P+AI Y I C
Sbjct: 16 IVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLISCLC 75
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ G A ++ +M + P + ++ I GY E A ++ + +
Sbjct: 76 KAGMLAEAESYLKRMPQH-CAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPH 134
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
YS + K N A +V +EM G P++ + +L L + + H A+ L
Sbjct: 135 AYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEAREL 190
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ +L+ + R +L EM ++ C+ + + N +L + + G +A + L++M
Sbjct: 383 WEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMT 442
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
PD TY+ +V C GK D A ++V+ G
Sbjct: 443 DTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDG 480
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 77/211 (36%), Gaps = 8/211 (3%)
Query: 256 VLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGP 315
VL + G C EMF EM I T V YN L++ + +
Sbjct: 278 VLILINGLCKARRPGEAKEMFQ-----EMRGRGISPT---VVTYNTLLEGLLSTAKLQDA 329
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
+L M P TY ++ LCK Q +A +LL M + P +E+ +
Sbjct: 330 MELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSR 389
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
R G+ D AF + +M + Q + + + G ++A ++ D
Sbjct: 390 LARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPD 449
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNG 466
Y L A+ ++ E++++G
Sbjct: 450 KFTYDKLVVGLCWQGKADQARKLVEELVRDG 480
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 82/178 (46%), Gaps = 2/178 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVG-CEPITLTYNYVLGVLCKNGQDADACELLEEM 357
YN +I C R + +++ EMR+ G P TY ++ CK G+ DA ++ +EM
Sbjct: 150 YNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEM 209
Query: 358 LGRN-CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
L + P A+ Y I C VGK DVA + MV+RG+ +AT+ + F+ R
Sbjct: 210 LTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDAR 269
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
DAY + S Y++L + + K N A V EM + G+R Y
Sbjct: 270 ASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTY 327
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 9/230 (3%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+ G C + +E+F EM++ ++ T Y LI R+ + L
Sbjct: 296 INGYCKEGNEKKALEVFE-----EMSQKGVRAT---AVTYTSLIYVFSRKGQVQETDRLF 347
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
+ G P + YN ++ C G A E++ EM + PD +TY + C +
Sbjct: 348 NVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLL 407
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
G+ D A ++M KRG+QP L ++ I GY + +DA + DK + + M Y
Sbjct: 408 GRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTY 467
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHM 489
+ L K A+N++ EM+ G+ P+ S Y +++ L T+ E M
Sbjct: 468 NALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGL-TTEDERM 516
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 14/190 (7%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V+ YN+L+ + +L EM++ G P TYN ++ CK G + A E+ E
Sbjct: 254 VATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFE 313
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM + A+TY I R G+ FN VK+G++P + + A I +
Sbjct: 314 EMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGG 373
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYS-------LLASLHDKNNNPVMAKNVLSEMMKNGLR 468
E AY+ + K +M Y+ LL L + A+ ++ EM K G++
Sbjct: 374 DMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDE-------ARTLIDEMTKRGIQ 426
Query: 469 PNVSVYRRVL 478
P++ Y ++
Sbjct: 427 PDLVSYNTLI 436
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 8/154 (5%)
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN 390
T T+N +L LC G+ A ELL +M P+A+TY I C G+ A
Sbjct: 116 TTTFNIMLRHLCATGKPVRALELLRQM----PRPNAVTYNTVIAGFCARGRVQAALEVMR 171
Query: 391 QMVKR-GLQPRLATHAAFIKGYFIFYRYEDAYKYV--VLSADKYKSSSNMLYSLLASLHD 447
+M +R G+ P T+A I G+ R EDA K +L+ + S+ M +L+ D
Sbjct: 172 EMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCD 231
Query: 448 KNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
V A +M++ G+ V+ Y ++ L
Sbjct: 232 VGKLDV-ALQYREDMVQRGIAMTVATYNLLMHAL 264
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 79/184 (42%), Gaps = 6/184 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI C +M Q G TYN ++ L + + +DA +LEEM
Sbjct: 222 YNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQ 281
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR-- 416
PD TY I I C+ G A F +M ++G++ T+ + I ++F R
Sbjct: 282 KNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLI---YVFSRKG 338
Query: 417 -YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
++ + ++ K ++Y+ L + H + A +++EM K + P+ Y
Sbjct: 339 QVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYN 398
Query: 476 RVLK 479
+++
Sbjct: 399 TLMR 402
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 85/184 (46%), Gaps = 6/184 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ++I CR + EM GC P +TYN +L LCK + DA +LL EM
Sbjct: 335 YTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEME 394
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R PD T+ I CR G F+ A F+ ++++ L+P + T+ + I G R
Sbjct: 395 ERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDG---MCRKG 451
Query: 419 DAYKYVVLSADKYKSS---SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
D K L D + +++ YS+L H + A L EM+K G PN+ Y
Sbjct: 452 DLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYN 511
Query: 476 RVLK 479
++K
Sbjct: 512 SIIK 515
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 4/202 (1%)
Query: 281 LYEMAKYVIKKTERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNY 336
L + K + + ER V+ + LI CR+ +F+ L + + P +TYN
Sbjct: 383 LLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNS 442
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
++ +C+ G A A EL ++M R P+ ITY I I C G+ + AF F ++MVK+G
Sbjct: 443 LIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKG 502
Query: 397 LQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAK 456
P + T+ + IKGY + +++ + ++ L + K N A
Sbjct: 503 NLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAF 562
Query: 457 NVLSEMMKNGLRPNVSVYRRVL 478
NV + M K +RP+ Y ++
Sbjct: 563 NVFNIMEKEMVRPDAVTYNMII 584
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 73/179 (40%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI MCR+ D +L +M P +TY+ ++ C+ GQ DA L+
Sbjct: 437 VVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLD 496
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM+ + P+ TY I CR G F +M + + P L T I GY
Sbjct: 497 EMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEE 556
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
A+ + + + Y+++ + + N A V M +G+ P+ Y
Sbjct: 557 NMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTY 615
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 88/205 (42%), Gaps = 5/205 (2%)
Query: 282 YEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNY 336
++ AK V + ++ V +NILI CR + K EM+ P ++++
Sbjct: 243 FDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSC 302
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
++G+ + G+ A L EM G PD + Y + I CR G A ++MV G
Sbjct: 303 LIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFG 362
Query: 397 LQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAK 456
P + T+ + G +R DA K + ++ + ++ L + + N A
Sbjct: 363 CLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENAL 422
Query: 457 NVLSEMMKNGLRPNVSVYRRVLKHL 481
+ +++ LRP+V Y ++ +
Sbjct: 423 QLFDTLLRQRLRPDVVTYNSLIDGM 447
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 69/172 (40%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ILI C + + L EM + G P TYN ++ C++G + L++M
Sbjct: 475 YSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMR 534
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
N PD IT+ I + AFN FN M K ++P T+ I G+ +
Sbjct: 535 QDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQ 594
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
DA + D Y L + H N A + EM+ G P+
Sbjct: 595 DAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPD 646
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 5/210 (2%)
Query: 282 YEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNY 336
++ A VI + E++ V +N+LI R D L+ M G +P +TYN
Sbjct: 173 FDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNS 232
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
VL LCK+ + A E+ M + PD ++ I I CRVG+ A F+ +M R
Sbjct: 233 VLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRY 292
Query: 397 LQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAK 456
+ P + + + I + + A Y+ ++Y+++ + + A
Sbjct: 293 VTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEAL 352
Query: 457 NVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
V EM+ G P+V Y +L L H+
Sbjct: 353 RVRDEMVGFGCLPDVVTYNTLLNGLCKQHR 382
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 94/218 (43%), Gaps = 5/218 (2%)
Query: 266 VSGVRALIEMFSVLGLYEMAK---YVIKKTERKVSYY--NILIKEMCRRCDFKGPRDLLV 320
S AL+ + S G +A+ ++ ++ +V+ Y NI++ C+ +F G ++
Sbjct: 122 ASASNALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVIS 181
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
EM + P +T+N ++ + G A L++ M R P +TY + C+
Sbjct: 182 EMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHR 241
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+FD A F M + + P + + I G+ ++A K+ +Y + + +S
Sbjct: 242 RFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFS 301
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
L L + A L EM GL P+ +Y V+
Sbjct: 302 CLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVI 339
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 98/199 (49%), Gaps = 2/199 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+I+I +C+ + + LL +M G +P Y ++ C+ G + ACE L+
Sbjct: 453 VYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLK 512
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M N PD Y I+ VGK D A ++++M+++G QP T+ I GY +
Sbjct: 513 KMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAG 572
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A + + + + ++ +Y+ + + K++N + L M++ GL P+ +Y
Sbjct: 573 NLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYG 632
Query: 476 RVLKHLHTSHQEHMAKCLS 494
V+ +L +S HM +S
Sbjct: 633 IVIHNLSSSG--HMQAAVS 649
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 108/231 (46%), Gaps = 8/231 (3%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTERKVSY------YNILIKEMCRRCDFKGPRDLLVEMRQV 325
LI LG A ++K+ K+ Y YN++I+ R+ + + LL EMR+
Sbjct: 389 LIRGLCKLGRMGRASRILKQMT-KIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKG 447
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P TY+ ++ LC+ G+ A LLE+M+ P+A Y I CR G F +A
Sbjct: 448 GISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLA 507
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
+M + L P L + + I G + ++A +Y +K ++ Y L
Sbjct: 508 CETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHG 567
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK-HLHTSHQEHMAKCLSS 495
+ N A+ +L +M+ +GL PN +Y ++L+ + + + E ++ L S
Sbjct: 568 YSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKS 618
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 35/221 (15%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ LI+ C+ D + + ++ EMR+ GC +TYN ++G LC+ G +A +
Sbjct: 243 VYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKK 302
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM PD TY I C+ G+ D A ++M GL P + ++ I G+
Sbjct: 303 EMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQG 362
Query: 416 RYEDAYKYV-VLSADKYKS----------------------------------SSNMLYS 440
++A+K V +SA + + M Y+
Sbjct: 363 NADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYN 422
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
L+ H + +N A +L+EM K G+ PNV Y ++ L
Sbjct: 423 LVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGL 463
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 97/228 (42%), Gaps = 5/228 (2%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEM 306
+VVE + + G S V LI G E A K+ E Y +I +
Sbjct: 264 KVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGL 323
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
C+R + LL EM G P + Y+ ++ + G +A ++++EM P+
Sbjct: 324 CKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNK 383
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
ITY+ I C++G+ A QM K G T+ I+G+ + E+A+ +
Sbjct: 384 ITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNE 443
Query: 427 SADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
S + YS++ + + A +L +M+ +GL+PN VY
Sbjct: 444 MRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVY 491
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 5/167 (2%)
Query: 265 LVSGVRALIEMFSVLGLY-EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMR 323
L+SG +M +GL EMAK K E +S YN LI C+ D R++ +
Sbjct: 669 LISGFCKAADMEKAVGLLDEMAK---KGIEPGISCYNALIDGFCKSDDISHARNIFNSII 725
Query: 324 QVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
G P +TY ++ CK G DA +L EML PDA Y + G
Sbjct: 726 CKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQ 785
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADK 430
A +M+ RG +++ + G+ + ++ K++ + DK
Sbjct: 786 QALFITEEMIARGYA-IISSFNTLVHGFCKRGKLQETVKFLHVMMDK 831
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 68/160 (42%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M G P TY+ ++ CK A +++EEM C + +TY I CR G
Sbjct: 234 MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGA 293
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
+ AF + +M GL P T+ A I G R + A + + + ++YS
Sbjct: 294 IEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYST 353
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
L + N A ++ EM G++PN Y +++ L
Sbjct: 354 LIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGL 393
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 50/112 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI C+ D + LL EM + G EP YN ++ CK+ + A + ++
Sbjct: 666 YGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSII 725
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ P+ +TY I C+ G A + +N+M+ G+ P ++ G
Sbjct: 726 CKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAG 777
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 65/168 (38%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y I+I + + +L + + G P +L Y ++ CK A LL+EM
Sbjct: 631 YGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMA 690
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P Y I C+ A N FN ++ +GL P T+ I GY
Sbjct: 691 KKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIR 750
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNG 466
DA + + +YS+LA+ + + A + EM+ G
Sbjct: 751 DAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARG 798
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 64/156 (41%)
Query: 319 LVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCR 378
L M + G P Y V+ L +G A +L + PD++ Y I C+
Sbjct: 616 LKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCK 675
Query: 379 VGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML 438
+ A ++M K+G++P ++ + A I G+ A K + +
Sbjct: 676 AADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVT 735
Query: 439 YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
Y+ L + K + A ++ +EM+ G+ P+ VY
Sbjct: 736 YTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVY 771
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 91/240 (37%), Gaps = 23/240 (9%)
Query: 230 EKAFGFLPVLISSKALTKKGIWRVVEVLNQ-VGGSCLVSGVRALIEMFSVLGLYEMAKYV 288
EKA G L + KKGI + N + G C + +F+ + +
Sbjct: 680 EKAVGLL------DEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSI--------I 725
Query: 289 IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQD- 347
K Y LI C+ D + DL EM G P Y+ VL C N D
Sbjct: 726 CKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYS-VLAAGCSNSGDL 784
Query: 348 ADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAF 407
A + EEM+ R + ++ + C+ GK F + M+ + + P L T
Sbjct: 785 QQALFITEEMIARG-YAIISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENI 843
Query: 408 IKGYFIFYRYEDAYKYVVLSADKYKS--SSNMLYSLLASLHDKNNNPVMAKNVLSEMMKN 465
+ G + +A+ V K S ++ L SL D N ++ +V+ M+++
Sbjct: 844 VIGLGEAGKLSEAHTIFVELQQKNASHRDTDHLSSLFT---DMINQGLVPLDVIHNMIQS 900
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 76/205 (37%), Gaps = 15/205 (7%)
Query: 289 IKKTERKVSYYNILIKEMCRRCDF---------------KGPRDLLVEMRQVGCEPITLT 333
+ K + + YY+ ++++ + DF + LL +M G P
Sbjct: 536 VGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFI 595
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
Y +L K+ L+ ML + PD Y I I G A + + +
Sbjct: 596 YAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIE 655
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPV 453
K GL P + + I G+ E A + A K Y+ L K+++
Sbjct: 656 KNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDIS 715
Query: 454 MAKNVLSEMMKNGLRPNVSVYRRVL 478
A+N+ + ++ GL PN Y ++
Sbjct: 716 HARNIFNSIICKGLPPNCVTYTTLI 740
>gi|156070779|gb|ABU45192.1| unknown [Petunia integrifolia subsp. inflata]
Length = 406
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 112/236 (47%), Gaps = 24/236 (10%)
Query: 199 SLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLP------VLISS---KALTKKG 249
++++ C Y+ +RQL ++ V +GFLP +LI S L +K
Sbjct: 139 NVLLSACVNTKQYDRVRQLFDEMPV--------KYGFLPDKVSYGILIRSYCEMGLPEKA 190
Query: 250 IWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIK 304
+ R+ E + + G L+ F G+ + A+ V + K V YN+ I+
Sbjct: 191 MERLKE-MEEKGVEITAITFTTLLHAFYKKGMGDEAEKVWNEMVNKGCGPDVGAYNVKIR 249
Query: 305 EMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHP 364
+ + D +G + L+ EM G +P T++YNY++ C+NG +A ++ E++ C+P
Sbjct: 250 NI-QGGDPEGVKALIEEMNNAGLKPDTISYNYLMTCYCENGLMDEAQKVYEDLETNGCNP 308
Query: 365 DAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
+A T+ I+Y C+ G+F+ + F + V+ P T ++G + +DA
Sbjct: 309 NAATFRSLILYLCKKGRFETGYKVFKESVRVNKMPDFNTLKCLVEGLVKREKLKDA 364
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 94/218 (43%), Gaps = 9/218 (4%)
Query: 271 ALIEMFSVLGLYEMAKYVIKK-----TERKVSYYNILIKEMCRRCDFKGPRDLLVEMR-Q 324
++I + + G+++ A + + T R +N+L+ + R L EM +
Sbjct: 105 SIIRSYGIAGMFDHALKIYDQMDDLGTPRSAISFNVLLSACVNTKQYDRVRQLFDEMPVK 164
Query: 325 VGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
G P ++Y ++ C+ G A E L+EM + AIT+ + + G D
Sbjct: 165 YGFLPDKVSYGILIRSYCEMGLPEKAMERLKEMEEKGVEITAITFTTLLHAFYKKGMGDE 224
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML-YSLLA 443
A +N+MV +G P + + I+ I + K ++ + + + Y+ L
Sbjct: 225 AEKVWNEMVNKGCGPDVGAYNVKIRN--IQGGDPEGVKALIEEMNNAGLKPDTISYNYLM 282
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + +N A+ V ++ NG PN + +R ++ +L
Sbjct: 283 TCYCENGLMDEAQKVYEDLETNGCNPNAATFRSLILYL 320
>gi|302780869|ref|XP_002972209.1| hypothetical protein SELMODRAFT_96926 [Selaginella moellendorffii]
gi|300160508|gb|EFJ27126.1| hypothetical protein SELMODRAFT_96926 [Selaginella moellendorffii]
Length = 363
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 85/183 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
++ YN LI +C+ L EM+ C P +TY+ ++G CK + AC L +
Sbjct: 45 INTYNTLIDGLCKTGRVPEVNRLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFD 104
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML + PD +T+ + C G D A ++V P + T+ + + G+
Sbjct: 105 DMLKQAALPDVVTFPTLVEGYCNAGLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVK 164
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R +A++ + A + ++Y+ L P +A +L EM+ NG++PN YR
Sbjct: 165 RMVEAHRVLKRMAKGECQPNVVIYTALIDAFCSAGKPTVAYKLLEEMVGNGVQPNAITYR 224
Query: 476 RVL 478
++
Sbjct: 225 SLI 227
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 87/203 (42%)
Query: 288 VIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQD 347
I E + YN LI C L+ EM GC P TYN ++ LCK G+
Sbjct: 2 TIWGIEPNMVTYNSLIHGFCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGRV 61
Query: 348 ADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAF 407
+ L EM + C+PD ITY I C++ + ++A F+ M+K+ P + T
Sbjct: 62 PEVNRLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPTL 121
Query: 408 IKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
++GY +DA + + S Y+ L K V A VL M K
Sbjct: 122 VEGYCNAGLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLKRMAKGEC 181
Query: 468 RPNVSVYRRVLKHLHTSHQEHMA 490
+PNV +Y ++ ++ + +A
Sbjct: 182 QPNVVIYTALIDAFCSAGKPTVA 204
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 94/256 (36%), Gaps = 24/256 (9%)
Query: 263 SCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
SCL+ G L + L++ + + V + L++ C LL E+
Sbjct: 84 SCLIGGFCKLDRINMACTLFD--DMLKQAALPDVVTFPTLVEGYCNAGLVDDAERLLEEI 141
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
C P TY ++ CK + +A +L+ M C P+ + Y I C GK
Sbjct: 142 VASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLKRMAKGECQPNVVIYTALIDAFCSAGKP 201
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML---- 438
VA+ +MV G+QP T+ + I G+ E+A+K + ++M
Sbjct: 202 TVAYKLLEEMVGNGVQPNAITYRSLIGGFCGTGDLEEAHKMLERLERNENCKADMFAYRV 261
Query: 439 --------------YSLLASLHDKNNNP---VMAKNVLSEM-MKNGLRPNVSVYRRVLKH 480
LL ++ P + + EM + RPN VY V++
Sbjct: 262 MMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGEMTLSRKGRPNAKVYEAVIQE 321
Query: 481 LHTSHQEHMAKCLSSR 496
L + A LS
Sbjct: 322 LAREGRHEKANALSDE 337
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 93/215 (43%), Gaps = 4/215 (1%)
Query: 265 LVSGVRALIEMFSVLGLY-EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMR 323
L+SG+ ++ +V GLY EM+ +K V Y LIK CR + + EMR
Sbjct: 226 LISGMCRARDLDAVDGLYKEMSDVGVKP---DVYTYGALIKGFCRTGRMENAVKMFNEMR 282
Query: 324 QVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
G P + + ++ CK G +L ++M R PD + Y + CR
Sbjct: 283 DTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLK 342
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
A + +M GL+P T+ I G + + A A+K S + Y+ L
Sbjct: 343 AAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALI 402
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
S K PV A+ VL EMM+ L P+ + Y V+
Sbjct: 403 SGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVI 437
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 76/183 (41%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ LI C+ + DL +MR G P + YN ++ LC+ A ++EEM
Sbjct: 293 FTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMK 352
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD +TY I C+ GK D+A + +M ++ + T+ A I G R
Sbjct: 353 NAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPV 412
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA + + + N Y+++ + + +L EM G +P V Y ++
Sbjct: 413 DAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIM 472
Query: 479 KHL 481
L
Sbjct: 473 NGL 475
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 7/153 (4%)
Query: 257 LNQVGGSCLVSGV-RALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGP 315
L++V + L+SG+ +A + + L EM + + E + Y ++I CR+ D K
Sbjct: 393 LDEVTYTALISGLSKAGRPVDAERVLREMMEAAL---EPDNTTYTMVIDAFCRKGDVKTG 449
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
LL EM+ G +P +TYN ++ LCK GQ +A LL ML PD ITY I +
Sbjct: 450 FKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDG 509
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
C+ GK N +G+ P A + + I
Sbjct: 510 QCKHGKV---ANSEELESSKGMVPDFAVYTSLI 539
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 73/162 (45%), Gaps = 1/162 (0%)
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
+++ G P T +N ++ + G+ A ++ +EM R+ P +T+ I CR
Sbjct: 175 LQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMR-RSVQPTVVTFNTLISGMCRA 233
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
D + +M G++P + T+ A IKG+ R E+A K D + + +++
Sbjct: 234 RDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVF 293
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ L H K N ++ +M G+ P++ Y ++ L
Sbjct: 294 TTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGL 335
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 84/218 (38%), Gaps = 38/218 (17%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQ------------ 346
YN L+ +CR + K ++ EM+ G +P +TY ++ CK+G+
Sbjct: 328 YNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMA 387
Query: 347 -----------------------DADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
DA +L EM+ PD TY + I CR G
Sbjct: 388 EKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVK 447
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
F +M +G +P + T+ + G + ++A + + S ++ Y++L
Sbjct: 448 TGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILL 507
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K+ ++ + S G+ P+ +VY ++ L
Sbjct: 508 DGQCKHGKVANSEELESS---KGMVPDFAVYTSLISEL 542
>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g15630, mitochondrial; Flags: Precursor
gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 90/195 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNILI C+ D K L EM G +P TY ++ VLC+ + +A EL E+++
Sbjct: 400 YNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVV 459
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
G+ PD + + C +G D AF+ +M + P T+ ++G ++E
Sbjct: 460 GKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFE 519
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + + + ++ Y+ L S + K + A V EM+ G P + Y +L
Sbjct: 520 EARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALL 579
Query: 479 KHLHTSHQEHMAKCL 493
K L + + +A+ L
Sbjct: 580 KGLSKNQEGELAEEL 594
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 99/196 (50%), Gaps = 8/196 (4%)
Query: 279 LGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
LG+ E+ + IK T + YN L++ R +G R ++ EM+ G +P TYN +L
Sbjct: 248 LGIMEV--FGIKPT---IVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPIL 302
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
+C G+ A E+L EM PD+++Y I I G ++AF + ++MVK+G+
Sbjct: 303 SWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMV 359
Query: 399 PRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNV 458
P T+ I G F+ + E A + +K ++ Y++L + + ++ + A +
Sbjct: 360 PTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFAL 419
Query: 459 LSEMMKNGLRPNVSVY 474
EMM +G++P Y
Sbjct: 420 HDEMMTDGIQPTQFTY 435
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 57/125 (45%)
Query: 286 KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNG 345
K V K + + N L+ C + LL EM + P +TYN ++ LC G
Sbjct: 457 KVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEG 516
Query: 346 QDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
+ +A EL+ EM R PD I+Y I + G AF ++M+ G P L T+
Sbjct: 517 KFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYN 576
Query: 406 AFIKG 410
A +KG
Sbjct: 577 ALLKG 581
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 73/172 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI + + L+ E+R+ G ++TYN ++ C++G A L +EM+
Sbjct: 365 YNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMM 424
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P TY I CR K A F ++V +G++P L + G+ +
Sbjct: 425 TDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMD 484
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
A+ + + ++ Y+ L A+ ++ EM + G++P+
Sbjct: 485 RAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPD 536
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 55/112 (49%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L++ +C F+ R+L+ EM++ G +P ++YN ++ K G A + +EML
Sbjct: 505 YNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEML 564
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+P +TY + + + ++A +M G+ P ++ + I+
Sbjct: 565 SLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEA 616
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 73/198 (36%), Gaps = 38/198 (19%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +NI+I +C+ K + L M G +P +TYN ++ G+ A ++
Sbjct: 225 VYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIIS 284
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM + PD TY + + C G+ A +M + GL P ++ I+G
Sbjct: 285 EMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRG----- 336
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
SN N + MA EM+K G+ P Y
Sbjct: 337 ------------------CSN------------NGDLEMAFAYRDEMVKQGMVPTFYTYN 366
Query: 476 RVLKHLHTSHQEHMAKCL 493
++ L ++ A+ L
Sbjct: 367 TLIHGLFMENKIEAAEIL 384
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 102/214 (47%), Gaps = 7/214 (3%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
+LI+ F + + A+ +KK K V YN LI + C F +L +M ++
Sbjct: 426 SLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEI 485
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G +P ++Y ++ LCK+G+ +A +L +M+ R P+A Y + I SC VGK A
Sbjct: 486 GVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDA 545
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
FF++M++ + P L T+ I G + +A ++ S + Y+ L S
Sbjct: 546 LRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISG 605
Query: 446 HDKNNNPVMAKNVLSEMMKN-GLRPNVSVYRRVL 478
+ N V L E MKN G++P V Y ++
Sbjct: 606 YANAGN-VSKCLGLYETMKNLGIKPTVRTYHPLI 638
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 110/291 (37%), Gaps = 21/291 (7%)
Query: 201 VIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFG-----------FLPVLISSKALTKKG 249
+ID G+L ++ Q+L V N ++G L I + + +G
Sbjct: 462 LIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRG 521
Query: 250 IWRVVEVLNQ-VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCR 308
+ +V N + GSC+V V+ + F EM + I T + YN+LI +C+
Sbjct: 522 VLPNAQVYNMLIDGSCMVGKVKDALRFFD-----EMMRSEISPT---LVTYNVLIDGLCK 573
Query: 309 RCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAIT 368
+ D L ++ G P +TYN ++ G + L E M P T
Sbjct: 574 KGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRT 633
Query: 369 YEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSA 428
Y I C ++ +N+M++ L P + A I Y + AY
Sbjct: 634 YHPLI-SGCSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGML 692
Query: 429 DKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
D+ M Y+ L H + K++++ M L P Y ++K
Sbjct: 693 DQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVK 743
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%)
Query: 311 DFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYE 370
+ K + L MR+ G P YN ++G LC+ + DA ++ +EM N +TY
Sbjct: 191 NLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYN 250
Query: 371 IFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
I C+VG+ D AF +M ++ + P + T + + G
Sbjct: 251 TLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSG 290
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 76/176 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+IL + R D G +L + + G T + +L LCK G+ A E+L++
Sbjct: 319 YSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFT 378
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
D + Y F+ CR+G + A +M GL+P T + I + +
Sbjct: 379 ENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMD 438
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
A ++V A+K + S Y+ L + K +L +M + G++PNV Y
Sbjct: 439 KAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSY 494
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 5/160 (3%)
Query: 265 LVSGVRALIEMFSVLGLYEMAKYV-IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMR 323
L+SG + LGLYE K + IK T R Y+ LI C + + L EM
Sbjct: 602 LISGYANAGNVSKCLGLYETMKNLGIKPTVRT---YHPLISG-CSKEGIELVEKLYNEML 657
Query: 324 QVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
Q+ P + YN ++ + G A L + ML + HPD +TY I+ R GK
Sbjct: 658 QMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLS 717
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY 423
+ N M + L P+ T+ +KG+ + AY +
Sbjct: 718 NIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVW 757
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 75/179 (41%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN+LI +CR + + EM + +TYN ++ CK G+ A ++ E
Sbjct: 211 VFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRE 270
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M ++ P+ IT+ + C++ K A + +M G P T++ G
Sbjct: 271 RMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCD 330
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
A + + +K +N S+L + K A+ +L + +NGL + +Y
Sbjct: 331 DGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIY 389
>gi|449507993|ref|XP_004163187.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g37230-like [Cucumis sativus]
Length = 760
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 103/233 (44%), Gaps = 12/233 (5%)
Query: 272 LIEMFSVLGLYEMAKYVIKK-----TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LIE + G+ + A + +K ER V Y+ L KE+ RR + + M G
Sbjct: 195 LIESYGKAGIVQEAVKIFQKMKELGVERSVKSYDALFKEIMRRGRYMMAKRYFNAMLNEG 254
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
EPI TYN +L + + A E+M R PD +TY I CR + A
Sbjct: 255 IEPIRHTYNVMLWGFFLSLRLETAKRFYEDMKSRGISPDVVTYNTMINGYCRFKMMEEAE 314
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSNMLYSLLASL 445
FF +M + + P + ++ IKGY R +DA + + + A K + +LL L
Sbjct: 315 QFFTEMKGKNIAPTVISYTTMIKGYVSVSRADDALRLFEEMKAAGEKPNDITYSTLLPGL 374
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRP-NVSVYRRVL----KHLHTSHQEHMAKCL 493
D P A+ +L+EM+ P + S++ R+L KH H+ K +
Sbjct: 375 CDAEKLPE-ARKILTEMVTRHFAPKDNSIFMRLLSCQCKHGDLDAAMHVLKAM 426
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 80/183 (43%), Gaps = 9/183 (4%)
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNC---- 362
C+ D +L M ++ Y ++ CK G A +LLE ++ +
Sbjct: 411 CKHGDLDAAMHVLKAMIRLSIPTEAGHYGILIENCCKAGMYDQAVKLLENLVEKEIILRP 470
Query: 363 ----HPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+A Y + I Y C G+ A FF Q++K+G+Q +A + I+G+ +
Sbjct: 471 QSTLEMEASAYNLIIQYLCNHGQTGKADTFFRQLLKKGIQDEVAFN-NLIRGHAKEGNPD 529
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A++ + + + S Y LL + P AK L M++NG P+ +++R V+
Sbjct: 530 LAFEMLKIMGRRGVSRDAESYKLLIKSYLSKGEPADAKTALDSMIENGHSPDSALFRSVM 589
Query: 479 KHL 481
+ L
Sbjct: 590 ESL 592
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 91/201 (45%)
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
K E V YN +I +C+ +L EM G P +TY+ ++ LC G+ +DA
Sbjct: 46 KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDA 105
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
LL +M+ R +PD T+ I + GK A +++MVKR + P + T+++ I G
Sbjct: 106 SRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLING 165
Query: 411 YFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
+ + R ++A + K+ + Y+ L K V EM + GL N
Sbjct: 166 FCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 225
Query: 471 VSVYRRVLKHLHTSHQEHMAK 491
Y +++ L + MA+
Sbjct: 226 TVTYNILIQGLFQAGDCDMAQ 246
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 4/184 (2%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L+ M GC+P +TY V+ LCK G A LL +M P + Y I C
Sbjct: 3 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ D A N F +M +G++P + T+++ I + R+ DA + + ++ +
Sbjct: 63 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK----HLHTSHQEHMAKCL 493
+S L K V A+ + EM+K + P++ Y ++ H + M + +
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182
Query: 494 SSRY 497
S++
Sbjct: 183 VSKH 186
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 79/187 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNILI+ + + D +++ EM G P +TYN +L LCKNG+ A + E +
Sbjct: 229 YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 288
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P TY I I C+ GK + ++ F + +G++P + + I G+ E
Sbjct: 289 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 348
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + ++ Y+ L ++ + + ++ EM G + S V
Sbjct: 349 EADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVT 408
Query: 479 KHLHTSH 485
LH
Sbjct: 409 NMLHDGR 415
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 1/204 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LIK C+ + ++ EM Q G T+TYN ++ L + G A E+ +
Sbjct: 191 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 250
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM+ P+ +TY + C+ GK + A F + + ++P + T+ I+G
Sbjct: 251 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 310
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ ED + + K + Y+ + S + + A + EM ++G PN Y
Sbjct: 311 KVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYN 370
Query: 476 RVLK-HLHTSHQEHMAKCLSSRYS 498
+++ L +E A+ + S
Sbjct: 371 TLIRARLRDGDREASAELIKEMRS 394
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 78/198 (39%), Gaps = 35/198 (17%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
++ + +K V ++ LI + L EM + +P +TY+ ++ C
Sbjct: 109 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 168
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
+ + +A ++ E M+ ++C PD +TY I C+ + + F +M +RGL T
Sbjct: 169 HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 228
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
+ I+G F + + MA+ + EM+
Sbjct: 229 YNILIQGLF-----------------------------------QAGDCDMAQEIFKEMV 253
Query: 464 KNGLRPNVSVYRRVLKHL 481
+G+ PN+ Y +L L
Sbjct: 254 SDGVPPNIMTYNTLLDGL 271
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 47/113 (41%)
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
K E + YNI+I+ MC+ + DL + G +P + YN ++ C+ G +A
Sbjct: 291 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 350
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
L +EM P++ Y I R G + + +M G +T
Sbjct: 351 DALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 403
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 5/216 (2%)
Query: 271 ALIEMFSVLGLYEMAKYVIKK-----TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
L+ F+ LG + K K ++ V YNI+I MC+ D + L EM+
Sbjct: 103 GLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFR 162
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P T+TYN ++ K G+ D EEM +C PD ITY I C+ GK
Sbjct: 163 GLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKG 222
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
FF +M + GL+P + +++ + + + A K+ V + Y+ L
Sbjct: 223 LEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDA 282
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ K N A + EM + G+ NV Y ++ L
Sbjct: 283 YCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGL 318
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 89/230 (38%), Gaps = 9/230 (3%)
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVL---GLYEMAKYVIKKTER-----KVSYYNILIK 304
V +VL C V G +FSVL ++E A K +R K N L+
Sbjct: 48 VFDVLWSTRNVC-VPGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLH 106
Query: 305 EMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHP 364
+ R G + +M G +P TYN ++ +CK G A L EEM R P
Sbjct: 107 KFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIP 166
Query: 365 DAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV 424
D +TY I +VG+ D FF +M +P + T+ I + F + ++
Sbjct: 167 DTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFF 226
Query: 425 VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + YS L K + A +M + GL PN Y
Sbjct: 227 REMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTY 276
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 78/183 (42%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ L+ C+ + V+MR++G P TY ++ CK G +DA L +
Sbjct: 238 VVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLAD 297
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM + +TY I C V + A F +MV G+ P LA++ A I G+
Sbjct: 298 EMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAK 357
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ A + + + +LY AK V++EM + G++ N +Y
Sbjct: 358 NMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYT 417
Query: 476 RVL 478
++
Sbjct: 418 TLM 420
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 76/182 (41%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V YN LI C+ + EM+Q G +P ++Y+ ++ CK A +
Sbjct: 200 EPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALK 259
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+M P+ TY + C++G AF ++M + G++ + T+ A I G
Sbjct: 260 FYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLC 319
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
R ++A + + Y+ L K N A +L EM G++P++
Sbjct: 320 DVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLL 379
Query: 473 VY 474
+Y
Sbjct: 380 LY 381
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 51/120 (42%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V Y LI +C K +L +M G P +Y ++ K A E
Sbjct: 305 EWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALE 364
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
LL+EM GR PD + Y FI C + K + A N+M ++G++ + + YF
Sbjct: 365 LLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYF 424
>gi|449464322|ref|XP_004149878.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37230-like [Cucumis sativus]
Length = 760
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 103/233 (44%), Gaps = 12/233 (5%)
Query: 272 LIEMFSVLGLYEMAKYVIKK-----TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LIE + G+ + A + +K ER V Y+ L KE+ RR + + M G
Sbjct: 195 LIESYGKAGIVQEAVKIFQKMKELGVERSVKSYDALFKEIMRRGRYMMAKRYFNAMLNEG 254
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
EPI TYN +L + + A E+M R PD +TY I CR + A
Sbjct: 255 IEPIRHTYNVMLWGFFLSLRLETAKRFYEDMKSRGISPDVVTYNTMINGYCRFKMMEEAE 314
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSNMLYSLLASL 445
FF +M + + P + ++ IKGY R +DA + + + A K + +LL L
Sbjct: 315 QFFTEMKGKNIAPTVISYTTMIKGYVSVSRADDALRLFEEMKAAGEKPNDITYSTLLPGL 374
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRP-NVSVYRRVL----KHLHTSHQEHMAKCL 493
D P A+ +L+EM+ P + S++ R+L KH H+ K +
Sbjct: 375 CDAEKLPE-ARKILTEMVTRHFAPKDNSIFMRLLSCQCKHGDLDAAMHVLKAM 426
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 80/183 (43%), Gaps = 9/183 (4%)
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNC---- 362
C+ D +L M ++ Y ++ CK G A +LLE ++ +
Sbjct: 411 CKHGDLDAAMHVLKAMIRLSIPTEAGHYGILIENCCKAGMYDQAVKLLENLVEKEIILRP 470
Query: 363 ----HPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+A Y + I Y C G+ A FF Q++K+G+Q +A + I+G+ +
Sbjct: 471 QSTLEMEASAYNLIIQYLCNHGQTGKADTFFRQLLKKGIQDEVAFN-NLIRGHAKEGNPD 529
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A++ + + + S Y LL + P AK L M++NG P+ +++R V+
Sbjct: 530 LAFEMLKIMGRRGVSRDAESYKLLIKSYLSKGEPADAKTALDSMIENGHSPDSALFRSVM 589
Query: 479 KHL 481
+ L
Sbjct: 590 ESL 592
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 103/215 (47%), Gaps = 1/215 (0%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L ++++Y I + V YNI++ +C+ + L EM+ G P ++YN ++
Sbjct: 201 LNDISRYEIN-CKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHG 259
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
C G+ ++ LL+EML + PD +T+ + I C+ GK A M++ G+ P
Sbjct: 260 FCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPD 319
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
L T+ + I+G+ + A + V K + Y++L + + K A + +
Sbjct: 320 LVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYN 379
Query: 461 EMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSS 495
EM+ G RPNV Y +LK + + + AK L S
Sbjct: 380 EMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFS 414
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 5/157 (3%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
+LI F G +E +K ++ + + + +N+LI +C+ + LL M +
Sbjct: 255 SLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIES 314
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P +TYN ++ C G A EL M + C PD I+Y + I + K + A
Sbjct: 315 GIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEA 374
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
+N+M+ G +P + T+ + +KG F+ + +DA K
Sbjct: 375 MKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKK 411
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 81/188 (43%), Gaps = 11/188 (5%)
Query: 299 YNILIKEMCRR-CDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
Y I + +C+ C F+ + L E++ + N ++ LCK G+ A EL E++
Sbjct: 428 YGIFLDGLCKNDCLFEAMK-LFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKL 486
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
P+ +TY I I CR G+ D A +M G P + T+ ++G++ +
Sbjct: 487 SNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKL 546
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
E+ + + A K S + S++ + K+ ++L P + + V
Sbjct: 547 EEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLL---------PRFPIQKGV 597
Query: 478 LKHLHTSH 485
KHL +H
Sbjct: 598 DKHLLMTH 605
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 48/109 (44%)
Query: 295 KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
++ N LI +C+ + +L ++ G EP +TY ++ C+ GQ A L+
Sbjct: 459 EIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLI 518
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
++M C PD ITY + K + ++M ++ + P T
Sbjct: 519 QKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAIT 567
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 110/261 (42%), Gaps = 17/261 (6%)
Query: 238 VLISSKALTKKGIWRVVEVLNQVGGSCLVSGV-------RALIEMFSVLGLYEMAKYVI- 289
VLI + L K+G +V+E ++ G + SG+ +LIE F ++G A+ +
Sbjct: 290 VLIDT--LCKEG--KVIEA-KKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFV 344
Query: 290 ----KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNG 345
K E V YN+LI + + L EM VG P +TY+ +L + G
Sbjct: 345 SMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAG 404
Query: 346 QDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
+ DA +L M ++ TY IF+ C+ A F ++ + +
Sbjct: 405 KVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLN 464
Query: 406 AFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKN 465
I G + E A++ +++ + + Y+++ + A ++ +M N
Sbjct: 465 CLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEAN 524
Query: 466 GLRPNVSVYRRVLKHLHTSHQ 486
G P++ Y +++ + S++
Sbjct: 525 GCTPDIITYNTLMRGFYESNK 545
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 2/111 (1%)
Query: 263 SCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
+CL+ G+ ++ + L+E K + E V Y I+I CR L+ +M
Sbjct: 464 NCLIDGLCKAGKLETAWELFE--KLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKM 521
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFI 373
GC P +TYN ++ ++ + + +LL M ++ PDAIT I +
Sbjct: 522 EANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVV 572
Score = 38.5 bits (88), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 46/115 (40%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+S +N L+ + + + L +MR G T N +L LC + +
Sbjct: 69 LSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFA 128
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+L R P+ +TY I C + A F +M K G P + T+ IKG
Sbjct: 129 GILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKG 183
Score = 38.1 bits (87), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 70/172 (40%), Gaps = 8/172 (4%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P ++N++L L K + L +M D T I + C V + F
Sbjct: 67 PSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAA 126
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML-YSLLASLHD 447
F +++RG P + T+ IKG + +R +A + + L K + +++ Y L
Sbjct: 127 FAGILRRGYSPNIVTYNTLIKGLCMEHRISEATR-LFLRMQKLGCTPDVVTYGTLIKGLC 185
Query: 448 KNNNPVMAKNVLSEMMKN------GLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
N +A + EM+ + +PNV Y ++ L +E AK L
Sbjct: 186 GTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQL 237
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 107/276 (38%), Gaps = 44/276 (15%)
Query: 242 SKALTKKGIWRVVEVLNQ-VGGSCLVSGVRALIEMFSVL--------------------- 279
++ LT KGI V N + G CL + R +E+F +
Sbjct: 409 ARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCS 468
Query: 280 -GLYEMAKYVIKKTE-----RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLT 333
G E A ++K+ E R V YN LI C+ + ++ EM G +T
Sbjct: 469 RGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVT 528
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
YN ++ LCKN + +A +L+++ML PD TY + Y CR G A + M
Sbjct: 529 YNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMT 588
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDA--------YKYVVLSADKYKSSSNMLYSLLASL 445
G +P T+ I G R E A K +VL+ Y L+
Sbjct: 589 SNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALF------ 642
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ A + EMM+ G P+ Y+ V + L
Sbjct: 643 --REKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGL 676
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 101/257 (39%), Gaps = 43/257 (16%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
V G C + V+ +E+ V+ + + + + YN LI +C+ + + ++L
Sbjct: 323 VNGLCRIGHVKHALEILDVM--------LQEGFDPDIFTYNSLIFGLCKLGEVEEAVEIL 374
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADAC---------------------------- 351
+M P T+TYN ++ LCK Q +A
Sbjct: 375 NQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLT 434
Query: 352 -------ELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
EL EEM + CHPD TY + I C G+ + A + +M G + T+
Sbjct: 435 NNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTY 494
Query: 405 AAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMK 464
I G+ R E+A + + S + + Y+ L KN A ++ +M+
Sbjct: 495 NTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLM 554
Query: 465 NGLRPNVSVYRRVLKHL 481
GL+P+ Y +L +
Sbjct: 555 EGLKPDKFTYNSLLTYF 571
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 80/180 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N L+ +CR K ++L M Q G +P TYN ++ LCK G+ +A E+L +M+
Sbjct: 319 FNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMI 378
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R+ P+ +TY I C+ + + A + +G+ P + T + I+G + +
Sbjct: 379 LRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHR 438
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + K Y++L A ++L EM +G NV Y ++
Sbjct: 439 LAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLI 498
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 89/214 (41%), Gaps = 3/214 (1%)
Query: 277 SVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNY 336
++L + EM Y + E+ + L++ + G + +M GC +T N
Sbjct: 230 AILMMEEMGSYGLSPDEKT---FTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNV 286
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
++ CK G+ + ++EM PD T+ + CR+G A + M++ G
Sbjct: 287 LVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEG 346
Query: 397 LQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAK 456
P + T+ + I G E+A + + + S + + Y+ L S K N A
Sbjct: 347 FDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEAT 406
Query: 457 NVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
+ + G+ P+V + +++ L ++ +A
Sbjct: 407 ELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLA 440
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 56/148 (37%), Gaps = 36/148 (24%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY------------------------ 334
YN L+ CR D K D++ M GCEP ++TY
Sbjct: 564 YNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQ 623
Query: 335 -----------NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCR-VGKF 382
N V+ L + + ++A L EM+ + PDA+TY++ C G
Sbjct: 624 LKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPI 683
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKG 410
A +F +M +G P ++ +G
Sbjct: 684 GEAVDFLVEMTDKGFLPDFSSFLMLAEG 711
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 57/127 (44%), Gaps = 1/127 (0%)
Query: 361 NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
N P ++ YE + + G F +M G + R T I+ Y F +++A
Sbjct: 100 NFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEA 159
Query: 421 YKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
V + +++ + Y+ L ++ N + + V S M+ G++P+V+ + ++K
Sbjct: 160 VAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIK 219
Query: 480 HLHTSHQ 486
L +HQ
Sbjct: 220 ALCRAHQ 226
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 64/157 (40%), Gaps = 10/157 (6%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
LI S G E+A +++ + K YN +IK + R L EM +
Sbjct: 601 TLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEK 660
Query: 326 GCEPITLTYNYVLGVLCKNGQD-ADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
G P +TY V LC G +A + L EM + PD ++ + C + D
Sbjct: 661 GDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLCALSMEDT 720
Query: 385 AFNFFNQMVKRGLQPRLA-THAAFIKGYFIFYRYEDA 420
N+++K Q + + + I G+ +++DA
Sbjct: 721 LIKLVNRVMK---QANFSDSEVSMIMGFLKIRKFQDA 754
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 105/236 (44%), Gaps = 5/236 (2%)
Query: 251 WRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKE 305
++++ ++N+ G I+ GL E A+ + + + K Y+ LI
Sbjct: 469 YKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDG 528
Query: 306 MCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPD 365
C+ R LL +M GC P ++TYN ++ CK +A L++ M+ R+ P
Sbjct: 529 YCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPA 588
Query: 366 AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV 425
A TY I I + +FD A + F+QM+ G P + + AFI Y R +DA +
Sbjct: 589 ADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLIC 648
Query: 426 LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K MLY+L + + + A +L M + G P+ Y ++KHL
Sbjct: 649 KMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHL 704
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 84/189 (44%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K + V Y +LI +C +F + +L M + G P +TYN ++ CK G A
Sbjct: 338 KHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSAS 397
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A E+L M NC P+A TY I+ CR A + ++M++R LQP + T+ I
Sbjct: 398 ALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIH 457
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
G AYK + L + YS+ K A+++ + + G++
Sbjct: 458 GQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKA 517
Query: 470 NVSVYRRVL 478
N +Y ++
Sbjct: 518 NEVIYSTLI 526
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 115/272 (42%), Gaps = 6/272 (2%)
Query: 212 ETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRA 271
E +R + + ++ L + + L +L+S + + +E+L+ + + + +
Sbjct: 151 EMLRSMNRRVDAFKFKLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFT-LNT 209
Query: 272 LIEMFSVLG-LYEMAKYVIKKTERKVSY----YNILIKEMCRRCDFKGPRDLLVEMRQVG 326
++ + LG + E YV K + +S Y LI CR + + + M G
Sbjct: 210 MVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKG 269
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
C ++Y ++ C+ + +A +L +M NC P TY + I C++G+ A
Sbjct: 270 CLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEAL 329
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
N F +M ++ QP + T+ I ++DA K + +K S + Y+ L +
Sbjct: 330 NMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGY 389
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
K A +LS M N PN Y ++
Sbjct: 390 CKKGLSASALEILSLMESNNCSPNARTYNELI 421
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 47/105 (44%)
Query: 308 RRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAI 367
RR D++ DL +M + GC P TY + LCK G A L + M + P+
Sbjct: 735 RRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNED 794
Query: 368 TYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
Y + SC++G + A + + M++ P L + + G +
Sbjct: 795 IYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLY 839
>gi|242049778|ref|XP_002462633.1| hypothetical protein SORBIDRAFT_02g029280 [Sorghum bicolor]
gi|241926010|gb|EER99154.1| hypothetical protein SORBIDRAFT_02g029280 [Sorghum bicolor]
Length = 466
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 72/135 (53%), Gaps = 3/135 (2%)
Query: 277 SVLGLYEMAKYVIKKTERKVSYYNILIKEMCR-RCDFKGPRDLLVEMRQVGCEPITLTYN 335
+V+GL E K +R V YN ++ C+ DF G +L +MR+ GC+ ++YN
Sbjct: 273 AVVGLLEEMKGRGIVADRAV--YNAMLAGFCKDEKDFGGAFAVLDDMRKNGCKADAVSYN 330
Query: 336 YVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR 395
++ LCK G+ DA EL+E+M R CHPD +TY + C G+F A ++MV +
Sbjct: 331 TLVAGLCKLGRWRDASELVEDMPRRGCHPDVVTYRMLFDGMCAAGEFLEANQVLDEMVFK 390
Query: 396 GLQPRLATHAAFIKG 410
G P F++G
Sbjct: 391 GFAPSKDGAQKFVEG 405
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Query: 311 DFKGP-RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITY 369
D + P RDLLV G P TYN ++ +G A +L +EML R P +T+
Sbjct: 127 DCRAPLRDLLVVCHDAGIPPDACTYNILMRAAAASGSVDHARQLFDEMLRRGIAPTVVTF 186
Query: 370 EIFIVYSCRVGKFDVAFNFFNQMVKR-GLQPRLATHAAFIKG 410
+ C G+ + AF+ MV++ + P + + +KG
Sbjct: 187 GTLVAALCDAGQLEDAFDMKEVMVRQYDVLPNAYVYTSLMKG 228
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 81/208 (38%), Gaps = 8/208 (3%)
Query: 269 VRALIEMFSVLGLYEMAKYVIKKTE--RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
V AL + + ++M + ++++ + Y L+K +C + D L EM G
Sbjct: 190 VAALCDAGQLEDAFDMKEVMVRQYDVLPNAYVYTSLMKGLCEKGDVDAALRLKEEM--AG 247
Query: 327 CEPITL---TYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK-F 382
+ L Y ++ L + G+ LLEEM GR D Y + C+ K F
Sbjct: 248 KADLVLDSAVYATLVRPLFRVGRKGAVVGLLEEMKGRGIVADRAVYNAMLAGFCKDEKDF 307
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
AF + M K G + ++ + G R+ DA + V + + Y +L
Sbjct: 308 GGAFAVLDDMRKNGCKADAVSYNTLVAGLCKLGRWRDASELVEDMPRRGCHPDVVTYRML 367
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
+ A VL EM+ G P+
Sbjct: 368 FDGMCAAGEFLEANQVLDEMVFKGFAPS 395
Score = 42.0 bits (97), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 11/129 (8%)
Query: 362 CH-----PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
CH PDA TY I + + G D A F++M++RG+ P + T + +
Sbjct: 139 CHDAGIPPDACTYNILMRAAAASGSVDHARQLFDEMLRRGIAPTVVTFGTLVAALCDAGQ 198
Query: 417 YEDAYKYVVLSADKYKSSSN--MLYSLLASLHDKNNNPVMAKNVLSEMM--KNGLRPNVS 472
EDA+ + +Y N + SL+ L +K + V A L E M K L + +
Sbjct: 199 LEDAFDMKEVMVRQYDVLPNAYVYTSLMKGLCEKGD--VDAALRLKEEMAGKADLVLDSA 256
Query: 473 VYRRVLKHL 481
VY +++ L
Sbjct: 257 VYATLVRPL 265
>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Vitis vinifera]
Length = 644
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 128/314 (40%), Gaps = 25/314 (7%)
Query: 173 EKVSALCFLKYMREIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFN-----VYQVC 227
EK L F Y + +PE I+ GR+ D R+ + FN + Q
Sbjct: 99 EKNFILVFRAYGKAHLPE---------KAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEG 149
Query: 228 LNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKY 287
L +A F + K + V+ + C + V IE+F EMA
Sbjct: 150 LFHRALEFYECGVGGKTNISPNVLSFNLVIKAM---CKLGLVDRAIEVFR-----EMA-- 199
Query: 288 VIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQD 347
I+K E V Y L+ +C+ LL EM+ GC P ++T+N ++ LCK G
Sbjct: 200 -IQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDM 258
Query: 348 ADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAF 407
+L++ M + C P+ +TY I C GK D A + ++MV P T+
Sbjct: 259 VRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTL 318
Query: 408 IKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
I G R D + ++ ++ YS L S K A + +M++ G
Sbjct: 319 INGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGC 378
Query: 468 RPNVSVYRRVLKHL 481
+PN+ VY ++ L
Sbjct: 379 QPNIVVYSALIDGL 392
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 4/216 (1%)
Query: 258 NQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRD 317
N+ S L+SG+ + +GL++ K V K + + Y+ LI +CR ++
Sbjct: 346 NEYAYSTLISGLFKEEKSEEAMGLWK--KMVEKGCQPNIVVYSALIDGLCREGKLDEAKE 403
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
+L EM GC P TY+ ++ K G A + +EM NC P+ I Y + I C
Sbjct: 404 ILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLC 463
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV--VLSADKYKSSS 435
GK A + M+ RGL+P + +++ I G E K +L +
Sbjct: 464 EDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPD 523
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
+ Y++L K N+ A ++L+ M+ G P++
Sbjct: 524 VVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDL 559
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 87/218 (39%), Gaps = 35/218 (16%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N+LI +C++ D L+ M GC P +TYN ++ LC G+ A LL+ M+
Sbjct: 245 FNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMV 304
Query: 359 GRNCHPDAITYEIFI-----------------------------VYSCRVG------KFD 383
C P+ +TY I YS + K +
Sbjct: 305 ASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSE 364
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
A + +MV++G QP + ++A I G + ++A + + +K + + YS L
Sbjct: 365 EAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLI 424
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K N A V EM KN PN Y ++ L
Sbjct: 425 KGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGL 462
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 80/203 (39%), Gaps = 18/203 (8%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y++LI +C + + M G P + Y+ ++ LC G +L EML
Sbjct: 455 YSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEML 514
Query: 359 GR--NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
+ + PD +TY I + C+ A + N M+ RG P L T F+
Sbjct: 515 CQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNA------ 568
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
+ + + L L+ LH K V A ++ M++ L PN S + R
Sbjct: 569 -------LREKLNPPQDGREFLDELVVRLH-KRQRIVGAAKIIEVMLQKFLPPNASTWER 620
Query: 477 VLKHLHTSH--QEHMAKCLSSRY 497
++ L Q + KC SS +
Sbjct: 621 IIPELCKPKKVQAIIDKCWSSLF 643
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 101/217 (46%), Gaps = 8/217 (3%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
G CL + + +E +V+G Y + + YN ++ +C++ RDLL++
Sbjct: 217 GYCLENKFKDAVEFLNVMGKYNCSPDNVT--------YNTILDTLCKKGRLGDARDLLMD 268
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M+ G P TYN ++ CK G +A ++E M N PD TY + I C G+
Sbjct: 269 MKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGR 328
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
+ AF ++M L P + ++ I G + + +A+K + ++K + + +++
Sbjct: 329 IEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNI 388
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ + K A N +++M ++G P+ Y ++
Sbjct: 389 MVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLI 425
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 83/182 (45%), Gaps = 5/182 (2%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L EM++ P T+TYN ++G LC+ G+ A L E+L PD TY + C
Sbjct: 510 LWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYC 569
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
R G + AF F N+MV+ +P + T ++G + E A K K K+ +
Sbjct: 570 REGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTV 629
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSH-----QEHMAKC 492
Y+ L + K A N+LSEM + L P+ Y ++ L S +E M+K
Sbjct: 630 TYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKM 689
Query: 493 LS 494
L
Sbjct: 690 LE 691
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 1/198 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNIL+ C+ K +++ M Q P TYN ++ LC G+ +A +L +EM
Sbjct: 281 YNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEME 340
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD ++Y I K AF +M ++G++P TH +K Y + +
Sbjct: 341 NLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMD 400
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA + + S + Y+ L + + K N A + EM + ++ + +L
Sbjct: 401 DASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTIL 460
Query: 479 KHL-HTSHQEHMAKCLSS 495
+ L E K LSS
Sbjct: 461 RTLCREKKLEEAYKLLSS 478
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 77/186 (41%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI LL EM + G +P +T+N ++ CK G+ DA +
Sbjct: 348 VVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTIT 407
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M PD +TY I C+ G AF ++M ++ ++ T ++
Sbjct: 408 KMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREK 467
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ E+AYK + + + + Y L + K+ N A + EM + + P+ Y
Sbjct: 468 KLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYN 527
Query: 476 RVLKHL 481
++ L
Sbjct: 528 CIIGGL 533
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 56/128 (43%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
+ YN ++ CR D + +M + +P T N +L LC G A +L
Sbjct: 559 TTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNT 618
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
+ + D +TY I C+ G+ D AFN ++M ++ L P T+ A I R
Sbjct: 619 WVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGR 678
Query: 417 YEDAYKYV 424
+A +++
Sbjct: 679 IREAEEFM 686
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%)
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
R+ + ++G P T+N V+ C + DA E L M NC PD +TY +
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDT 252
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
C+ G+ A + M RGL P T+ + GY
Sbjct: 253 LCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGY 288
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 70/172 (40%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I +C+ + L E+ + G P TYN +L C+ G A + +M+
Sbjct: 526 YNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMV 585
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD T I + C G + A FN V +G T+ I R +
Sbjct: 586 ENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLD 645
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
DA+ + +K + Y+ + + + A+ +S+M++ G P+
Sbjct: 646 DAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPD 697
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 58/124 (46%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N +++ +CR + LL R+ G ++Y ++ K+G A +L +EM
Sbjct: 457 NTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKE 516
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
+ P +TY I C+ GK + A + N++++ GL P T+ + GY E
Sbjct: 517 KEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEK 576
Query: 420 AYKY 423
A+++
Sbjct: 577 AFQF 580
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 66/172 (38%), Gaps = 31/172 (18%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
G C+ + +++F+ +V K YN LI +C+ +LL E
Sbjct: 602 GLCMEGVLEKALKLFNT--------WVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSE 653
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPD---------------- 365
M + P TYN ++ L +G+ +A E + +ML + PD
Sbjct: 654 MEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSET 713
Query: 366 -------AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
++ Y +I C GK+ A F + ++G+ +T+ + G
Sbjct: 714 SEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDG 765
>gi|359491272|ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Vitis vinifera]
Length = 450
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 144/347 (41%), Gaps = 11/347 (3%)
Query: 132 QVSEIIELLRSGDSETESKLLSM-SVSLSNASVIEILRVLNSEKVSALCFLKYMREIMPE 190
Q + I+ L+ DS+T ++ L V + V +L++L + AL F K + + P
Sbjct: 38 QDATIVNLVLKTDSQTLTRTLEKYPVEWTPNLVDRVLKLLWNHGPKALQFFKSL-DYHPT 96
Query: 191 FYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGI 250
+ S ID GRL DY+T+ L++ ++ N K F +I+ + ++
Sbjct: 97 YAHVSSSFDHAIDIAGRLRDYKTLWTLVDRMRTRRLGPNPKTFA----IITERYVSAGKP 152
Query: 251 WRVVEVLNQVGGSCLVSGVRALIEMFSVL---GLYEMAKYVIKKTERKVSYYNILIKEMC 307
R +++ + V + + + VL EMA + K R + IL+K
Sbjct: 153 DRAIKIFFSMHEHGCVQDLNSFNTILDVLCKSKRVEMADNKLFKVFR--GRFRILLKGFF 210
Query: 308 RRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAI 367
R K + ++M++ CE +TY V+ G+ A + EM+G P
Sbjct: 211 RAGQLKEAWEFFLQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGVLPSVA 270
Query: 368 TYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLS 427
TY FI C+ + A + F +M+++G P T+ I+G R E A +++
Sbjct: 271 TYNAFIQVLCKKDNVENAISVFEEMLRKGYMPNSTTYNVVIRGLCHVGRMEKAMEFMARM 330
Query: 428 ADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
D + +Y+++ NV +M PN+ Y
Sbjct: 331 KDDECEPNVQIYNVVIRYFCDAEEIEKGLNVFEKMGDADCLPNLDTY 377
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 75/196 (38%), Gaps = 32/196 (16%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V+ YN I+ +C++ + + + EM + G P + TYN V+ LC G+ A E +
Sbjct: 269 VATYNAFIQVLCKKDNVENAISVFEEMLRKGYMPNSTTYNVVIRGLCHVGRMEKAMEFMA 328
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M C P+ Y + I Y C + + N F +M P L T+ I F+
Sbjct: 329 RMKDDECEPNVQIYNVVIRYFCDAEEIEKGLNVFEKMGDADCLPNLDTYNILISAMFV-- 386
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
K++ + A +L EM++ G P +
Sbjct: 387 ------------------------------RKKSDYLLTAGKLLIEMVERGFLPRKFTFN 416
Query: 476 RVLKHLHTSHQEHMAK 491
RVL L + + AK
Sbjct: 417 RVLDGLLLTGNQDFAK 432
>gi|255661034|gb|ACU25686.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 376
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 109/236 (46%), Gaps = 7/236 (2%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVS-----YYNILIKEM 306
RV+E+ + GG A+I + A V+ + S YNILI
Sbjct: 115 RVLEIAEEKGGVLNAFAYSAMINGLCREAKLDKAASVLNGMIKNGSKPNAHVYNILINGF 174
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
F + EM C P +TYN ++ LCK + A+A +L++EML + P
Sbjct: 175 VGASKFYDAIRVFQEMGSTDCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCV 234
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
ITY + I C+ K ++A +NQ++ +GL+P + H I G + + A +
Sbjct: 235 ITYSLLIKGLCQGHKVEMAIQLWNQVISKGLKPDVQMHNILIHGLCSVGKTQLAL-MLYF 293
Query: 427 SADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+++ + N++ ++ L K+ + A + + +++NGL+P++ Y LK L
Sbjct: 294 DMNRWNCAPNLVTHNTLMEGFYKDGDIRNALVIWARILRNGLQPDIVSYNITLKGL 349
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 97/226 (42%)
Query: 282 YEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+E+ + + + + V +NI+++ + + + M++ G + T+ ++
Sbjct: 45 FELWELMGTEGGQNVISFNIMMRGLFNNGEVDKAISIWELMKKSGFVEDSTTHAILIDGF 104
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
CKNG + +LE + +A Y I CR K D A + N M+K G +P
Sbjct: 105 CKNGYINKSLRVLEIAEEKGGVLNAFAYSAMINGLCREAKLDKAASVLNGMIKNGSKPNA 164
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
+ I G+ ++ DA + S + + Y+ L + K A +++ E
Sbjct: 165 HVYNILINGFVGASKFYDAIRVFQEMGSTDCSPTIVTYNTLINGLCKGERFAEAYDLVKE 224
Query: 462 MMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSVE 507
M++ G +P V Y ++K L H+ MA L ++ S L V+
Sbjct: 225 MLEKGWKPCVITYSLLIKGLCQGHKVEMAIQLWNQVISKGLKPDVQ 270
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/192 (19%), Positives = 79/192 (41%), Gaps = 35/192 (18%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ +I +CR +L M + G +P YN ++ + DA + +EM
Sbjct: 132 YSAMINGLCREAKLDKAASVLNGMIKNGSKPNAHVYNILINGFVGASKFYDAIRVFQEMG 191
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+C P +TY I C+ +F A++ +M+++G +P + T++ IKG ++ E
Sbjct: 192 STDCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLIKGLCQGHKVE 251
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
MA + ++++ GL+P+V ++ ++
Sbjct: 252 -----------------------------------MAIQLWNQVISKGLKPDVQMHNILI 276
Query: 479 KHLHTSHQEHMA 490
L + + +A
Sbjct: 277 HGLCSVGKTQLA 288
Score = 38.5 bits (88), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 46/114 (40%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K + V +NILI +C + L +M + C P +T+N ++ K+G +
Sbjct: 263 KGLKPDVQMHNILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRN 322
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
A + +L PD ++Y I + C + A F + + P T
Sbjct: 323 ALVIWARILRNGLQPDIVSYNITLKGLCSCNRISFANLFLXDALANAIAPTXIT 376
>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
Length = 1128
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 96/216 (44%), Gaps = 5/216 (2%)
Query: 271 ALIEMFSVLGLYEMAKYVIKK-----TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
L+ F+ LG + K K ++ V YNI+I M + D + R L EM+
Sbjct: 103 GLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFR 162
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P T+TYN ++ K G+ D EEM +C PD ITY I C+ GK
Sbjct: 163 GLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKG 222
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
F+ +M + GL+P + +++ + + + A K+ V + Y+ L
Sbjct: 223 LEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDA 282
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ K N A + +EM++ G+ NV Y ++ L
Sbjct: 283 NCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGL 318
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 78/183 (42%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ L+ C+ + V+MR+VG P TY ++ CK G +DA L
Sbjct: 238 VVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLAN 297
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EML + +TY I C + A F +MV G+ P LA++ A I G+
Sbjct: 298 EMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAK 357
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ A + + + +LY AK V++EM +NG++ N +Y
Sbjct: 358 NMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYT 417
Query: 476 RVL 478
++
Sbjct: 418 TLM 420
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 79/182 (43%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V YN LI C+ + EM+Q G +P ++Y+ ++ CK A +
Sbjct: 200 EPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIK 259
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+M P+ TY + +C++G AF N+M++ G++ + T+ A I G
Sbjct: 260 FYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLC 319
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
R ++A K + Y+ L K N A +L+E+ G++P++
Sbjct: 320 DAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLL 379
Query: 473 VY 474
+Y
Sbjct: 380 LY 381
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 81/211 (38%), Gaps = 1/211 (0%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V Y LI +C K L +M G P +YN ++ K A E
Sbjct: 305 EWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALE 364
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
LL E+ GR PD + Y FI C + K + A N+M + G++ + + YF
Sbjct: 365 LLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYF 424
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKN-GLRPNV 471
+ + + + + + +L KN A + M + GL+PN
Sbjct: 425 KSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNA 484
Query: 472 SVYRRVLKHLHTSHQEHMAKCLSSRYSSLSL 502
+VY ++ L +Q A L + + L
Sbjct: 485 AVYTAMIDGLCKENQVKAATTLFEQMAQEGL 515
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 82/195 (42%), Gaps = 22/195 (11%)
Query: 234 GFLPVLISSKALTK-----KGIWRVVEVLNQVGGSCLVSGVRALIEMFS--VLGL----- 281
G +P L S AL K + R +E+LN++ G G++ + ++ + GL
Sbjct: 338 GVIPNLASYNALIHGFVKAKNMDRALELLNELKGR----GIQPDLLLYGTFIWGLCGLEK 393
Query: 282 YEMAKYVIKKTERKVSYYNILIKEMCRRCDFK--GPRD---LLVEMRQVGCEPITLTYNY 336
E AK V+ + + N LI FK P + LL EM+++ E +T+
Sbjct: 394 IEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCV 453
Query: 337 VLGVLCKNGQDADACELLEEMLGR-NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR 395
++ LCKN + A + M P+A Y I C+ + A F QM +
Sbjct: 454 LIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQE 513
Query: 396 GLQPRLATHAAFIKG 410
GL P + + + G
Sbjct: 514 GLVPDRTAYTSLMDG 528
>gi|297791089|ref|XP_002863429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309264|gb|EFH39688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 472
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 1/161 (0%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADA-CELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
MR++G P + N ++ LC+N DA ++ EM R C PD+ TY I CR G
Sbjct: 147 MREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFHEMPKRGCDPDSYTYGTLISGLCRFG 206
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+ D A F +MV++ P + T+ + I G ++A +YV K + YS
Sbjct: 207 RIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYS 266
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
L K+ + A + MM G RPN+ Y ++ L
Sbjct: 267 SLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGL 307
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 79/204 (38%), Gaps = 40/204 (19%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y LI +C + + EM+ G EP TY+ ++ LCK+G+ A EL E
Sbjct: 227 VVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFE 286
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+ R C P+ +TY I C+ K A ++M +GL+P + I G+
Sbjct: 287 MMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAVS 346
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
++ + A N L EM+ G+ PN
Sbjct: 347 KFRE-----------------------------------AANFLDEMILGGITPN----- 366
Query: 476 RVLKHLHTSHQEHMAKCLSSRYSS 499
R+ ++H + + L + Y S
Sbjct: 367 RLTWNIHVKTSNEVVRGLCTNYPS 390
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 83/198 (41%), Gaps = 8/198 (4%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K E V Y+ L+ +C+ +L M GC P +TY ++ LCK + +
Sbjct: 256 KGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQE 315
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP-------RLA 402
A ELL+ M + PDA Y I C V KF A NF ++M+ G+ P +
Sbjct: 316 AVELLDRMNLQGLKPDAGLYGKVISGFCAVSKFREAANFLDEMILGGITPNRLTWNIHVK 375
Query: 403 THAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM 462
T ++G Y Y+ + + L SL+ L K A ++ E+
Sbjct: 376 TSNEVVRGLCTNYPSRAFTLYLSMRSRGISVEVETLDSLVKCLCKKGEFQ-KAVQLVDEI 434
Query: 463 MKNGLRPNVSVYRRVLKH 480
+ +G PN ++ ++ H
Sbjct: 435 VTDGCIPNKGTWKLLIGH 452
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 101/217 (46%), Gaps = 8/217 (3%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
G CL + + +E +V+G Y + + YN ++ +C++ RDLL++
Sbjct: 217 GYCLENKFKDAVEFLNVMGKYNCSPDNVT--------YNTILDALCKKGRLGDARDLLMD 268
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M+ G P TYN ++ CK G +A ++E M N PD TY + I C G+
Sbjct: 269 MKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGR 328
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
+ AF ++M L P + ++ I G + + +A+K + ++K + + +++
Sbjct: 329 IEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNI 388
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ + K A N +++M ++G P+ Y ++
Sbjct: 389 MVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLI 425
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 83/182 (45%), Gaps = 5/182 (2%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L EM++ P T+TYN ++G LC+ G+ A L E+L PD TY + C
Sbjct: 510 LWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYC 569
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
R G + AF F N+MV+ +P + T ++G + E A K K K+ +
Sbjct: 570 REGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTV 629
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTS-----HQEHMAKC 492
Y+ L + K A N+LSEM + L P+ Y ++ L S +E M+K
Sbjct: 630 TYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKM 689
Query: 493 LS 494
L
Sbjct: 690 LE 691
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 1/198 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNIL+ C+ K +++ M Q P TYN ++ LC G+ +A +L +EM
Sbjct: 281 YNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEME 340
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD ++Y I K AF +M ++G++P TH +K Y + +
Sbjct: 341 NLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMD 400
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA + + S + Y+ L + + K N A + EM + ++ + +L
Sbjct: 401 DASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTIL 460
Query: 479 KHL-HTSHQEHMAKCLSS 495
+ L E K LSS
Sbjct: 461 RTLCREKKLEEAYKLLSS 478
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 77/186 (41%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI LL EM + G +P +T+N ++ CK G+ DA +
Sbjct: 348 VVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTIT 407
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M PD +TY I C+ G AF ++M ++ ++ T ++
Sbjct: 408 KMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREK 467
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ E+AYK + + + + Y L + K+ N A + EM + + P+ Y
Sbjct: 468 KLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYN 527
Query: 476 RVLKHL 481
++ L
Sbjct: 528 CIIGGL 533
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 56/128 (43%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
+ YN ++ CR D + +M + +P T N +L LC G A +L
Sbjct: 559 TTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNT 618
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
+ + D +TY I C+ G+ D AFN ++M ++ L P T+ A I R
Sbjct: 619 WVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGR 678
Query: 417 YEDAYKYV 424
+A +++
Sbjct: 679 IREAEEFM 686
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%)
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
R+ + ++G P T+N V+ C + DA E L M NC PD +TY +
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDA 252
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
C+ G+ A + M RGL P T+ + GY
Sbjct: 253 LCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGY 288
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 69/171 (40%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I +C+ + L E+ + G P TYN +L C+ G A + +M+
Sbjct: 526 YNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMV 585
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD T I + C G + A FN V +G T+ I R +
Sbjct: 586 ENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLD 645
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
DA+ + +K + Y+ + + + A+ +S+M++ G P
Sbjct: 646 DAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLP 696
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 58/124 (46%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N +++ +CR + LL R+ G ++Y ++ K+G A +L +EM
Sbjct: 457 NTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKE 516
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
+ P +TY I C+ GK + A + N++++ GL P T+ + GY E
Sbjct: 517 KEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEK 576
Query: 420 AYKY 423
A+++
Sbjct: 577 AFQF 580
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 65/172 (37%), Gaps = 31/172 (18%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
G C+ + +++F+ +V K YN LI +C+ +LL E
Sbjct: 602 GLCMEGMLEKALKLFNT--------WVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSE 653
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHP----------------- 364
M + P TYN ++ L +G+ +A E + +ML + P
Sbjct: 654 MEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSET 713
Query: 365 ------DAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
++ Y +I C GK+ A F + ++G+ +T+ + G
Sbjct: 714 SEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDG 765
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 90/201 (44%)
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
K E V Y +I +C+ +L EM G P +TY+ ++ LC G+ +DA
Sbjct: 251 KLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDA 310
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
LL +M+ R +PD T+ I + GK A +++MVKR + P + T+++ I G
Sbjct: 311 SRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLING 370
Query: 411 YFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
+ + R ++A + K+ + YS L K + EM + GL N
Sbjct: 371 FCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGN 430
Query: 471 VSVYRRVLKHLHTSHQEHMAK 491
Y +++ L + MA+
Sbjct: 431 TVTYTTLIQGLFQAGDCDMAQ 451
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L+ M GC+P +TY V+ LCK G A LL +M P + Y I C
Sbjct: 208 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLC 267
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ D A N F +M +G++P + T+++ I + R+ DA + + ++ +
Sbjct: 268 KNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 327
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+S L K V A+ + EM+K + P++ Y
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 364
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 4/178 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ILI CRR +L +M ++G EP +T + +L C + + ++A L+++M
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ +T+ I K A ++MV +G QP L T+ + G + R +
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNG--LCKRGD 236
Query: 419 DAYKYVVLSA-DKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+++L+ ++ K +L Y+ + KN + A N+ EM G+RPNV Y
Sbjct: 237 TDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTY 294
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 78/198 (39%), Gaps = 35/198 (17%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
++ + +K V ++ LI + L EM + +P +TY+ ++ C
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
+ + +A ++ E M+ ++C PD ++Y I C+ + D F +M +RGL T
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT 433
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
+ I+G F + + MA+ + EM+
Sbjct: 434 YTTLIQGLF-----------------------------------QAGDCDMAQEIFKEMV 458
Query: 464 KNGLRPNVSVYRRVLKHL 481
+G+ PN+ Y +L L
Sbjct: 459 SDGVPPNIMTYNTLLDGL 476
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI+ + + D +++ EM G P +TYN +L LCKNG+ A + E +
Sbjct: 434 YTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 493
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
P TY I I C+ GK + ++ F + +G++P + + I G+
Sbjct: 494 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF 546
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 86/199 (43%), Gaps = 1/199 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ LIK C+ +L EM Q G T+TY ++ L + G A E+ +
Sbjct: 396 VVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFK 455
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM+ P+ +TY + C+ GK + A F + + ++P + T+ I+G
Sbjct: 456 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 515
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ ED + + K + Y+ + S + + A + EM ++G PN Y
Sbjct: 516 KVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYN 575
Query: 476 RVLK-HLHTSHQEHMAKCL 493
+++ L +E A+ +
Sbjct: 576 TLIRARLRDGDREASAELI 594
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 47/113 (41%)
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
K E + YNI+I+ MC+ + DL + G +P + YN ++ C+ G +A
Sbjct: 496 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 555
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
L +EM P++ Y I R G + + +M G +T
Sbjct: 556 DALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 608
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 71/174 (40%), Gaps = 2/174 (1%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M+ +G TY+ ++ C+ Q A +L +M+ P+ +T + C
Sbjct: 106 QMQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSK 165
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+ A +QM G QP T I G F+ + +A + K + Y
Sbjct: 166 RISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYG 225
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLS 494
++ + K + +A +L++M + L P V +Y ++ L +HM L+
Sbjct: 226 VVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGL--CKNKHMDDALN 277
Score = 38.9 bits (89), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 68/156 (43%), Gaps = 6/156 (3%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P + ++ +L + K + L E+M + TY I I CR + +A
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV-VLSADKYKSSSNMLYSLLAS--L 445
+M+K G +P + T ++ + GY R +A V + Y+ ++ +L+ L
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
H+K + V ++ M+ G +P++ Y V+ L
Sbjct: 199 HNKASEAVA---LIDRMVAKGCQPDLVTYGVVVNGL 231
>gi|222632709|gb|EEE64841.1| hypothetical protein OsJ_19698 [Oryza sativa Japonica Group]
Length = 496
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 85/183 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI E CR +F+ R L EM G ++YN ++ LC++G+ DA +LL+ M
Sbjct: 111 YNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMR 170
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P IT+ + + + GK A FFNQM G QP T+ I G+
Sbjct: 171 TEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMT 230
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + + ++ + + Y++L + N+ A +L+ M K GL + Y ++
Sbjct: 231 RANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLV 290
Query: 479 KHL 481
+ L
Sbjct: 291 RAL 293
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 126/324 (38%), Gaps = 41/324 (12%)
Query: 198 CSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVL 257
C+ +++ C + D R++ ++ + + NE + L + +KG + + E +
Sbjct: 41 CTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKG-FALFEEM 99
Query: 258 NQVGGSCLVSGVRALIEMFSVLGLYEMAKYV-----IKKTERKVSYYNILIKEMCRRCDF 312
+ G + LI + G +E A+ + ++ R V YN LI +CR
Sbjct: 100 RRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKL 159
Query: 313 ------------KGPR------DLLVE-----------------MRQVGCEPITLTYNYV 337
+G R +LLV+ M+ G +P +TYN +
Sbjct: 160 WDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNML 219
Query: 338 LGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
+ C+ A L +M R P +TY I I R AF M K GL
Sbjct: 220 IAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGL 279
Query: 398 QPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKN 457
+ T+ ++ + +DA K +K SN++Y ++ + + + A
Sbjct: 280 EVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALK 339
Query: 458 VLSEMMKNGLRPNVSVYRRVLKHL 481
++ EM + GL PN + Y ++ L
Sbjct: 340 LIMEMRQKGLIPNSASYGLTIRVL 363
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 6/186 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI CR + +++ M G +P TYN ++ LCK G+ A A +L EML
Sbjct: 4 YNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEML 63
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD TY +V SCR F A F +M+++G+ P L + ++ + +F R
Sbjct: 64 NIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMA---VFSRNR 120
Query: 419 DAYKYVVLSADKYKSS---SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ +V D K N++Y++L + +N N + A + EM++ G +V Y
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180
Query: 476 RVLKHL 481
+L L
Sbjct: 181 TILNGL 186
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 55/113 (48%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ LI C+ + L M Q +P + YN ++ CK G+ A EL + M+
Sbjct: 214 FTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMI 273
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
R P+ ITY I I C VG AF ++ M+++G++P L T IKGY
Sbjct: 274 SRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGY 326
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 78/181 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +L+ CR + + EM + GC + YN +L LCK DA +L +EM+
Sbjct: 144 YTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMV 203
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R PD T+ I C+ G A + F M +R ++P + + I G+ E
Sbjct: 204 ERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEME 263
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + + +++ Y +L + + + A + M++ G++P + V+
Sbjct: 264 KASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVI 323
Query: 479 K 479
K
Sbjct: 324 K 324
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 60/151 (39%), Gaps = 35/151 (23%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL-------------- 341
+ YN L+ E CRR +F +++ EM + G P ++++ ++ V
Sbjct: 71 TTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFR 130
Query: 342 ---------------------CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
C+NG +A ++ +EML + C D I Y + C+
Sbjct: 131 DMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEK 190
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
A F++MV+RG P T I G+
Sbjct: 191 MLTDADKLFDEMVERGALPDFYTFTTLIHGH 221
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 2/127 (1%)
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
+TY I CR G + AF N M +GL+P L T+ A I G RY A ++
Sbjct: 2 VTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIE 61
Query: 427 SADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
+ S Y+ L + +N AK + EM++ G+ P++ + ++ S
Sbjct: 62 MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVF--SRN 119
Query: 487 EHMAKCL 493
H+ + L
Sbjct: 120 RHLDQAL 126
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 100/206 (48%), Gaps = 6/206 (2%)
Query: 280 GLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
GL MA + + + Y LIK +C L M+++GC P +TY ++
Sbjct: 150 GLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMK 209
Query: 340 VLCKNGQDADACELLEEML------GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
LC+ G + A +L +EML G N P I+Y I I C+ + D A + F +M
Sbjct: 210 GLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMK 269
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPV 453
+G+ P + ++ + I G+ ++E+A + ++ + + +++L + K +
Sbjct: 270 VQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVI 329
Query: 454 MAKNVLSEMMKNGLRPNVSVYRRVLK 479
AK++L M++ G+ PN+ Y +++
Sbjct: 330 EAKDLLEVMIQRGIVPNLLTYNSLIE 355
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 92/195 (47%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+I+I +C+ RDL EM+ G P ++Y ++ C G+ +A L EM+
Sbjct: 245 YSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMV 304
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+ +T+ + I C+ GK A + M++RG+ P L T+ + I+G+ +
Sbjct: 305 NQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLN 364
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + V K + Y++L + + K + A + + M++ G RP+V Y +L
Sbjct: 365 SARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALL 424
Query: 479 KHLHTSHQEHMAKCL 493
L + AK L
Sbjct: 425 TGLFQGGKVGDAKKL 439
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 97/221 (43%), Gaps = 20/221 (9%)
Query: 215 RQLLNDFNVYQVCLNEKAFGFLPVLIS--------SKALTKKGIWRVVEVLNQVGGSCLV 266
+++LND ++Y + F PV+IS K + + E + G + V
Sbjct: 225 QEMLNDSSLYGI-------NFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTV 277
Query: 267 SGVRALIEMFSVLGLYEMAK-----YVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
+LI F G +E AK V + + V +N+LI +C+ +DLL
Sbjct: 278 ISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEV 337
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M Q G P LTYN ++ C G A EL M + C PD I Y + I C+ K
Sbjct: 338 MIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSK 397
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
+ A +N M++ G +P + T+ A + G F + DA K
Sbjct: 398 VEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKK 438
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 2/115 (1%)
Query: 299 YNILIKEMCRR-CDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
Y I + +C+ C F+ +L +++ + +N ++ LCK G+ A EL E++
Sbjct: 455 YGIFLNGLCKNGCLFEA-MELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKL 513
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
PD +TY I I CR G+ A F +M K G P T+A I+G+F
Sbjct: 514 PQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFF 568
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 47/112 (41%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI+ C D R+L V M GCEP + Y ++ CK + +A +L ML
Sbjct: 350 YNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGML 409
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
PD TY + + GK A F M G+ L + F+ G
Sbjct: 410 QVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNG 461
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 112/289 (38%), Gaps = 12/289 (4%)
Query: 205 CGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLI--SSKALTKKGIWRVVEVLNQVGG 262
CG +E ++L N+ V N F L ++ K + K + +EV+ Q G
Sbjct: 289 CG--GKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDL---LEVMIQRGI 343
Query: 263 SCLVSGVRALIEMFSVLGLYEMAKYVI-----KKTERKVSYYNILIKEMCRRCDFKGPRD 317
+ +LIE F ++G A+ + K E V Y +LI C+ +
Sbjct: 344 VPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMK 403
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L M QVG P TY +L L + G+ DA +L M D Y IF+ C
Sbjct: 404 LYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLC 463
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ G A FN++ ++ + I G + E A++ + +
Sbjct: 464 KNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVV 523
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
Y+++ + V A + +M KNG P+ Y +++ S +
Sbjct: 524 TYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKK 572
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 78/191 (40%), Gaps = 17/191 (8%)
Query: 206 GRLDDYETMRQLLND-FNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSC 264
G+ D +T LL F +V +K FG + V L GI+ + G C
Sbjct: 412 GKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIF--------LNGLC 463
Query: 265 LVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQ 324
+ +E+F+ L Y + + + +N LI +C+ + +L ++ Q
Sbjct: 464 KNGCLFEAMELFNKLKSYNI--------KLDIECFNCLIDGLCKAGKLETAWELFEKLPQ 515
Query: 325 VGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
+P +TYN ++ C+ GQ A L ++M C PD ITY I K +
Sbjct: 516 EELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEK 575
Query: 385 AFNFFNQMVKR 395
+ MV+R
Sbjct: 576 VVELLHMMVQR 586
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 65/167 (38%), Gaps = 12/167 (7%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+MR G P T N +L LC + + ++ +L R PD +TY I C
Sbjct: 121 QMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEH 180
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS----- 435
+ A F +M K G P T+ +KG R + + L + SS
Sbjct: 181 RISKAALLFTRMQKLGCTPNAITYGTLMKG---LCRTGNISIALKLHQEMLNDSSLYGIN 237
Query: 436 ----NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ YS++ K+ A+++ EM G+ P V Y ++
Sbjct: 238 FKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLI 284
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 160/397 (40%), Gaps = 52/397 (13%)
Query: 130 PKQVSEIIELLRSGD--SETESKLLSMSVSLSNASVIEILRVLNSEKVS--ALCFLKYMR 185
P+ V+ I+ LL SG S E L S + + ++ RV+NS K + AL F ++
Sbjct: 10 PRTVTAILNLLHSGRPWSAIEPDLSPFSGASTTPRIVG--RVVNSLKDAKLALAFFRWAP 67
Query: 186 EIMPEFYKNS---------------------------------DICS--LVIDNCGRLDD 210
+P F + D+CS +VI D
Sbjct: 68 ASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGD 127
Query: 211 YETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKG-IWRVVEVLNQVGGSCLVSGV 269
+LL + AF P++ A+ G + ++ L +G V
Sbjct: 128 LHAALELLEEMK--SAGFAPDAFTHTPIIT---AMANAGDLDGAMDHLRSMGCDPNVVTY 182
Query: 270 RALIEMFS-VLGLYEMAKYVIKKTER----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQ 324
ALI F+ L E K + + ER + YN+L+ +C+ +D++ +M +
Sbjct: 183 TALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIE 242
Query: 325 VGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
G P +T+N ++ CK G DA +LL M+ + P+ +TY I C+ KF
Sbjct: 243 GGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLE 302
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLAS 444
A +M RG+ P T++A I G + E+A + + A + ++YS +
Sbjct: 303 AKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIH 362
Query: 445 LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K+ + A+ L EM K P+V Y V+ L
Sbjct: 363 AFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGL 399
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 138/317 (43%), Gaps = 22/317 (6%)
Query: 176 SALCFLKYMRE--IMPEFYKNSDICSLVIDNCGRLDD-YETMRQLLNDFNVYQVCLNEKA 232
+AL L+ M+ P+ + ++ I + + N G LD + +R + D NV
Sbjct: 130 AALELLEEMKSAGFAPDAFTHTPIIT-AMANAGDLDGAMDHLRSMGCDPNVVT------- 181
Query: 233 FGFLPVLISSKALTKK--GIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIK 290
LI++ A KK +++E + + G + L++ L + A+ V+K
Sbjct: 182 ---YTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVK 238
Query: 291 KT-----ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNG 345
K V +N L+ C+R + R LL M G P +TY+ ++ LCK+
Sbjct: 239 KMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQ 298
Query: 346 QDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
+ +A E+LEEM R PDA TY I C+ K + A +M G P + ++
Sbjct: 299 KFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYS 358
Query: 406 AFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKN 465
+ I + + +A K + + KS + Y+ + K A+ +L +M ++
Sbjct: 359 SIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQES 418
Query: 466 G-LRPNVSVYRRVLKHL 481
G + P+V Y V+ L
Sbjct: 419 GDVLPDVVTYSTVINGL 435
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 77/194 (39%), Gaps = 3/194 (1%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V YNI+I C D +LL EM+ G P T+ ++ + G A +
Sbjct: 109 EPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMD 168
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
L M C P+ +TY I R K + A +M +RG P L T+ +
Sbjct: 169 HLRSM---GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALC 225
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
A V + + + M ++ L K N A+ +L M+ G+RPNV
Sbjct: 226 KLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVV 285
Query: 473 VYRRVLKHLHTSHQ 486
Y ++ L S +
Sbjct: 286 TYSALIDGLCKSQK 299
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 6/159 (3%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTER------KVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
+I+ LG A+ ++++ + V Y+ +I +C+ + LL M +
Sbjct: 395 VIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKA 454
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
GC P +TY ++ LCK G+ +A LL+ M C P+ +TY I C+ K D A
Sbjct: 455 GCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEA 514
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV 424
+M G P L T+ + G + R ++A + V
Sbjct: 515 ERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLV 553
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 4/145 (2%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG-CEPITLTYNYVLG 339
L EM K ++ V YN +I +C+ + +L +M++ G P +TY+ V+
Sbjct: 377 LQEMRK---QRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVIN 433
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
LCK+ +A +LL+ M C+PD +TY I C+ G+ + A M + G P
Sbjct: 434 GLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAP 493
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYV 424
+ T+ I G + ++A + +
Sbjct: 494 NVVTYTTLISGLCKARKVDEAERVM 518
>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
gi|194700420|gb|ACF84294.1| unknown [Zea mays]
gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
Length = 598
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 90/186 (48%), Gaps = 1/186 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN +I MC + + +LL M+ GC+P +TYN VL LC + DA EL+
Sbjct: 338 VVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMI 397
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M + PD T+ I + C+ G AF F QM ++G P T++ I G
Sbjct: 398 KMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAG 457
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ E A + + A+K ++ M L SL+ ++ + + V+ ++ +G+ P +Y
Sbjct: 458 KMEQALELLNEMANKGFNTDKMYRVLTESLNKEDKIEEVVQ-VVHKLQDSGISPQTVLYN 516
Query: 476 RVLKHL 481
VL L
Sbjct: 517 TVLLGL 522
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 112/280 (40%), Gaps = 43/280 (15%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSY-----YNILIKEM 306
RVVE G + AL++ + GL E A+ V+ V +N LI +
Sbjct: 117 RVVEA---CGPEATAATYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHAL 173
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
C R +L M GC P +TYN +L CK A EL++ M C P+
Sbjct: 174 CERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNN 233
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY--- 423
+TY + I CR G D A N + RG +P + +KG+ R+ DA +
Sbjct: 234 VTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDE 293
Query: 424 --------------VVLSA-----------------DKYKSSSNML-YSLLASLHDKNNN 451
V+++ K+ ++N++ Y+ + S + N
Sbjct: 294 MVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGN 353
Query: 452 PVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
A +LS M G +P++ Y VLK L ++ + A+
Sbjct: 354 VDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAE 393
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 86/227 (37%), Gaps = 35/227 (15%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL-------------------- 338
YN++I MCR D R+LL + GC+P T+ YN VL
Sbjct: 236 YNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMV 295
Query: 339 ---------------GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
LC+ G LE+M C + +TY I C G D
Sbjct: 296 RENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVD 355
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
A + M G +P + T+ +KG R+EDA + ++ + + N ++ +
Sbjct: 356 SALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTII 415
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
S + + A V +M + G PN + Y ++ L + + A
Sbjct: 416 SFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQA 462
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 58/150 (38%), Gaps = 34/150 (22%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
S +N +I C++ ++ +M + GC P + TY+ ++G L K G+ A ELL E
Sbjct: 409 STFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNE 468
Query: 357 MLGRNCH----------------------------------PDAITYEIFIVYSCRVGKF 382
M + + P + Y ++ CR GK
Sbjct: 469 MANKGFNTDKMYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKT 528
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
D A + MV G P +T+ I+G F
Sbjct: 529 DYAIDVLADMVSCGCMPDESTYIILIEGLF 558
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 90/190 (47%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNI + +C+ + K L ++M G +P +TY ++ C+ G+ +A ++ + ML
Sbjct: 515 YNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGML 574
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P A+TY +FI CR G A+ +F +M++ G++P T+ I R
Sbjct: 575 VSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTN 634
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
AY++ ++ S + Y+LL + K N A + SEM ++G+ P+ + +
Sbjct: 635 LAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALF 694
Query: 479 KHLHTSHQEH 488
K +H
Sbjct: 695 KGFDEGQSKH 704
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 1/184 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI C+ + K L ++++ G P LTYN +L C+ G +A +EM+
Sbjct: 375 YNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMV 434
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C PD TY I + S +V + FF++M+ +GLQP + I I
Sbjct: 435 EQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTS 494
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A++ + + SS + Y++ K+ N A + +M+ +GL+P+ Y L
Sbjct: 495 EAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITY-TCL 553
Query: 479 KHLH 482
H H
Sbjct: 554 IHAH 557
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 109/264 (41%), Gaps = 16/264 (6%)
Query: 231 KAFGFLPVLISSKALT---------KKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGL 281
+A G LP LI+ +L K+ +W + L + G + V L++ + LG
Sbjct: 364 RAMGLLPDLITYNSLINGYCKAGNLKEALWLFGD-LKRAGLAPSVLTYNILLDGYCRLGD 422
Query: 282 YEMAK-----YVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNY 336
E A+ V + + VS Y IL+ + + R+ EM G +P YN
Sbjct: 423 LEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNT 482
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
+ G ++A +L E M+ R D +TY IF+ C+ G A+ + +MV G
Sbjct: 483 RISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDG 542
Query: 397 LQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAK 456
LQP T+ I + R +A S + Y++ + + N A
Sbjct: 543 LQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAY 602
Query: 457 NVLSEMMKNGLRPNVSVYRRVLKH 480
+M++ G+RPN Y VL H
Sbjct: 603 GWFQKMLEEGVRPNEVTY-NVLIH 625
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 71/148 (47%), Gaps = 6/148 (4%)
Query: 265 LVSG--VRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
L++G R +E L L EM I T V YN +I M R + + R VEM
Sbjct: 308 LITGYFARGSVEKAGALQL-EMENEGIVPT---VVTYNTIIHGMFRSGNVEAARMKFVEM 363
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
R +G P +TYN ++ CK G +A L ++ P +TY I + CR+G
Sbjct: 364 RAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDL 423
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ A F +MV++G QP ++T+ + G
Sbjct: 424 EEARRFKQEMVEQGCQPDVSTYTILMNG 451
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 129/317 (40%), Gaps = 31/317 (9%)
Query: 176 SALCFLKYMREI----MPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEK 231
S LC + RE+ +P F K ++ + + R DD MR +VY L
Sbjct: 177 STLCLAAF-REMAHHGVPPFIKECNLVLRALRDEARWDD---MR------SVYAEMLQ-- 224
Query: 232 AFGFLPVLISSKALT----KKG-IWRVVEVLNQV---GGSCLVSGV--RALIEMFSVLGL 281
G P +++ L ++G + + ++L ++ G CL S V +I + G
Sbjct: 225 -LGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGE 283
Query: 282 YEMAKYVIKKTE--RKVS--YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYV 337
E A ++ + +K S +N LI R + L +EM G P +TYN +
Sbjct: 284 LEKAAQLVDRMRMSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTI 343
Query: 338 LGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
+ + ++G A EM PD ITY I C+ G A F + + GL
Sbjct: 344 IHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGL 403
Query: 398 QPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKN 457
P + T+ + GY E+A ++ ++ Y++L + K N M +
Sbjct: 404 APSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVRE 463
Query: 458 VLSEMMKNGLRPNVSVY 474
EM+ GL+P+ Y
Sbjct: 464 FFDEMLSKGLQPDCFAY 480
>gi|302781572|ref|XP_002972560.1| hypothetical protein SELMODRAFT_32515 [Selaginella moellendorffii]
gi|300160027|gb|EFJ26646.1| hypothetical protein SELMODRAFT_32515 [Selaginella moellendorffii]
Length = 341
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 82/184 (44%), Gaps = 4/184 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNI++ +C+ K DLL M C P TYN ++ LCK G+ DA L+E M
Sbjct: 42 YNIILTHLCKHGKEKEALDLLHSMATTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQ 101
Query: 359 GRNCHPDAITYEIFIVYSCRVG----KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
R+C D +TY I CR G + + AF F +MV +G P T+ I
Sbjct: 102 ARDCPTDIVTYNTLIHGLCRKGNGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRV 161
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
E A K + L + + + Y++L + K A ++ EM G P+V Y
Sbjct: 162 KMDEQAQKVLDLMHENGCAFDLVTYNMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTY 221
Query: 475 RRVL 478
V+
Sbjct: 222 NSVV 225
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 1/183 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ++I + R + + +L M + GC +TYN ++ K G A +L EM
Sbjct: 151 YTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLVTYNMLINRFAKAGMMDKAMDLFVEMP 210
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R C PD +TY + C+ GK + A F +M RG+ P T+ + R +
Sbjct: 211 TRGCIPDVVTYNSVVDGFCKAGKVEEANKLFAEMKARGIFPNGRTYTSITDACLKAGRMQ 270
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA+ Y+V K + Y L S K + +L EM++ G +PN+ + V
Sbjct: 271 DAHAYLV-EMRKEGLVDAISYVALISTICKLGKGKLGFQLLREMLEKGFKPNLVTFNVVF 329
Query: 479 KHL 481
+ L
Sbjct: 330 EAL 332
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 4/184 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ +++ C + + LL M+ YN +L LCK+G++ +A +LL M
Sbjct: 7 YSTIVRGYCEDGETRQALALLEHMKNAEVPANAKLYNIILTHLCKHGKEKEALDLLHSMA 66
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI----F 414
+C PD TY I I C+VG+ + A M R + T+ I G
Sbjct: 67 TTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQARDCPTDIVTYNTLIHGLCRKGNGR 126
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+R E A++ DK + +++ Y+++ + A+ VL M +NG ++ Y
Sbjct: 127 FRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLVTY 186
Query: 475 RRVL 478
++
Sbjct: 187 NMLI 190
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 61/154 (39%), Gaps = 4/154 (2%)
Query: 332 LTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQ 391
TY+ ++ C++G+ A LLE M +A Y I + + C+ GK A + +
Sbjct: 5 FTYSTIVRGYCEDGETRQALALLEHMKNAEVPANAKLYNIILTHLCKHGKEKEALDLLHS 64
Query: 392 MVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY-SLLASLHDKNN 450
M P + T+ I R EDA V + + + + Y +L+ L K N
Sbjct: 65 MATTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQARDCPTDIVTYNTLIHGLCRKGN 124
Query: 451 NPVMAK---NVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + EM+ G P Y V+ L
Sbjct: 125 GRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDAL 158
>gi|255660824|gb|ACU25581.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 418
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 85/183 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ +L EM G P +T+ ++ CKNG+ A E+
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKNGRVDLAMEIYR 265
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G A + ++M +GL+P T+ I G
Sbjct: 266 QMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGXCKEG 325
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A++Y + ++ Y+ L S + V A+ +L EM+ GL+P + Y
Sbjct: 326 DLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 385
Query: 476 RVL 478
++
Sbjct: 386 MII 388
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 52/140 (37%), Gaps = 35/140 (25%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL-------------------- 338
YN LI +C++ D K DL+ EM G +P +TY ++
Sbjct: 279 YNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEYRKRMI 338
Query: 339 ---------------GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
LC+ G+ DA ++L EML P+ TY + I C+ G
Sbjct: 339 KENIRXDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEXCKKGDVW 398
Query: 384 VAFNFFNQMVKRGLQPRLAT 403
+M + G P + T
Sbjct: 399 TGSKLLKEMQRXGYVPNVVT 418
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 87/193 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ LI CR + EMR+ +P + YN ++ CK G+ +A EL+ EM
Sbjct: 333 FTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEME 392
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD +TY + C++G D AF +M+K+G+ P T+++ I+G R
Sbjct: 393 AKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLG 452
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA + Y+ L H K N A ++ EM+K G+ P+V Y ++
Sbjct: 453 DACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLI 512
Query: 479 KHLHTSHQEHMAK 491
L S + A+
Sbjct: 513 DGLSKSARTKEAQ 525
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 74/160 (46%), Gaps = 1/160 (0%)
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL-EEMLGRNCHPDAITYEIFIV 374
R LL M + G P TYN ++ LC GQ +A ++ ++M G C P+ +TY +
Sbjct: 139 RRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVA 198
Query: 375 YSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSS 434
CR G+ D A M + G++P L T + G R EDA K A + +
Sbjct: 199 AFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTP 258
Query: 435 SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ Y+ L S + K A V +EM + G+ P+V +
Sbjct: 259 DGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTF 298
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI + LG + A+ +I + E K V Y+ ++ C+ D +L +M + G
Sbjct: 371 LINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKG 430
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
P +TY+ ++ LC+ + DACEL E+ML PD TY I C+ G A
Sbjct: 431 VVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKAL 490
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
+ ++M+K+G+ P + T++ I G R ++A +
Sbjct: 491 SLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQR 526
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN L+ CR + L+ MR+ G P +T+N V+ LCK G+ DA ++ +
Sbjct: 190 VVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFD 249
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
EM PD ++Y + C+ G A F +M ++G+ P + T + I
Sbjct: 250 EMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLI 302
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 9/180 (5%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLV-----EMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
V YNIL++ +C R G R+ + +MR GC P +TYN ++ C+ G+ A
Sbjct: 154 VYTYNILVRALCAR----GQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAA 209
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
L+ M P +T+ + C+ G+ + A F++M + GL P ++ + G
Sbjct: 210 ERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSG 269
Query: 411 YFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
Y +A A K + ++ L + N A ++ +M + GLR N
Sbjct: 270 YCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMN 329
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 77/183 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ C+ + EM Q G P +T+ ++ +C+ G A L+ +M
Sbjct: 263 YNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMR 322
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R + T+ I CR G D A +M + +QP + + I GY R +
Sbjct: 323 ERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMD 382
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + + K + YS + S + K + A + +M+K G+ P+ Y ++
Sbjct: 383 EARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLI 442
Query: 479 KHL 481
+ L
Sbjct: 443 RGL 445
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 72/172 (41%), Gaps = 20/172 (11%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI C+ + + L EM + G P +TY+ ++ L K+ + +A LL ++
Sbjct: 473 YTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLY 532
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD I YE +++ CR +F + A +KG+ +
Sbjct: 533 YEDPVPDNIKYEA-LMHCCRTAEFK-------------------SVVALLKGFSMKGLMN 572
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
A K D++ +YS+L H + N + A + ++++ G PN
Sbjct: 573 QADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPN 624
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 90/187 (48%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ +I +C+ ++L EM++ G P TYN ++ C +G+ +DA +LL+
Sbjct: 255 VVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQ 314
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EML R PD +TY I + GKF A +++M+ RG+ P T+++ I G+
Sbjct: 315 EMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQN 374
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R + A L A K S + + ++ L + +L EM + GL + + Y
Sbjct: 375 RLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYN 434
Query: 476 RVLKHLH 482
++ +
Sbjct: 435 TLIHGFY 441
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 69/161 (42%)
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G EP TYN ++ L G+ +A EL EEM R PD ITY I C+ + D A
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
F+ M + P + T I GY R +D + + ++ + Y L
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
K N A ++ EM+ +G+ P+ R +L L + +
Sbjct: 626 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEE 666
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 85/184 (46%), Gaps = 7/184 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVG-CEPITLTYNYVLGVLCKNGQDADACELLEEM 357
Y ++ MC++ D +LL +M +V P + Y+ ++ LCK+G+ +DA L EM
Sbjct: 222 YGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM 281
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF---IF 414
+ PD TY IV C G++ A +M++R + P + T+ A I + F
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ E+ Y ++ + + + YS + K N A+++ M G PN+ +
Sbjct: 342 FEAEELYDEML---PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITF 398
Query: 475 RRVL 478
++
Sbjct: 399 NTLI 402
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 10/209 (4%)
Query: 206 GRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCL 265
G + D T L++ F Y V A L +ISS +V + G C
Sbjct: 425 GLVADTTTYNTLIHGF--YLVGDLNAALDLLQEMISSGLCPD-----IVTCDTLLDGLCD 477
Query: 266 VSGVRALIEMFSVLGLYEM---AKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
++ +EMF V+ + A + E V YNILI + F +L EM
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
G P T+TY+ ++ LCK + +A ++ + M ++ P+ +T+ I C+ G+
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
D F +M +RG+ T+ I G+
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGF 626
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 118/282 (41%), Gaps = 25/282 (8%)
Query: 230 EKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVI 289
E FG + + S KG+ +++ + + S + V ++ V+ E VI
Sbjct: 40 EAGFGGESLKLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVI 99
Query: 290 ---KKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+K ERK + + ILIK C ++ ++G P +T+N +L L
Sbjct: 100 SLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGL 159
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
C + ++A L +M C P+ +T+ + CR G+ A ++M++ GLQP
Sbjct: 160 CVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQ 219
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSS----SNMLYSLLASLHDKNNNPVMAKN 457
T+ + G + D + L + S + ++YS + K+ A+N
Sbjct: 220 ITYGTIVDG---MCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQN 276
Query: 458 VLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSS 499
+ +EM + G+ P++ Y ++ + C S R+S
Sbjct: 277 LFTEMQEKGIFPDLFTYNSMI----------VGFCSSGRWSD 308
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 5/148 (3%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKT-ERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQV 325
++I F G + A+ ++++ ERK+S YN LI + F +L EM
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 354
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P T+TY+ ++ CK + A + M + C P+ IT+ I C + D
Sbjct: 355 GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDG 414
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFI 413
++M + GL T+ I G+++
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGFYL 442
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 126/338 (37%), Gaps = 42/338 (12%)
Query: 172 SEKVSALCFLKYMREIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEK 231
+ VSAL L+ M E+ N I S +ID+ + + + L + + EK
Sbjct: 233 GDTVSALNLLRKMEEV-SHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE-------MQEK 284
Query: 232 AFGFLPVLISSKALT----KKGIWRVVEVLNQ-----------VGGSCLVSGVRALIEMF 276
G P L + ++ G W E L Q V + L++ + F
Sbjct: 285 --GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFF 342
Query: 277 SVLGLYE--MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
LY+ + + +I T Y+ +I C++ + M GC P +T+
Sbjct: 343 EAEELYDEMLPRGIIPNT----ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITF 398
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N ++ C + D ELL EM D TY I VG + A + +M+
Sbjct: 399 NTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMIS 458
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSN----------MLYSLLA 443
GL P + T + G + +DA + + V+ K ++ Y++L
Sbjct: 459 SGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILI 518
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
S + A+ + EM G+ P+ Y ++ L
Sbjct: 519 SGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 90/187 (48%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ +I +C+ ++L EM++ G P TYN ++ C +G+ +DA +LL+
Sbjct: 255 VVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQ 314
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EML R PD +TY I + GKF A +++M+ RG+ P T+++ I G+
Sbjct: 315 EMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQN 374
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R + A L A K S + + ++ L + +L EM + GL + + Y
Sbjct: 375 RLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYN 434
Query: 476 RVLKHLH 482
++ +
Sbjct: 435 TLIHGFY 441
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 69/161 (42%)
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G EP TYN ++ L G+ +A EL EEM R PD ITY I C+ + D A
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
F+ M + P + T I GY R +D + + ++ + Y L
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
K N A ++ EM+ +G+ P+ R +L L + +
Sbjct: 626 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEE 666
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 85/184 (46%), Gaps = 7/184 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVG-CEPITLTYNYVLGVLCKNGQDADACELLEEM 357
Y ++ MC++ D +LL +M +V P + Y+ ++ LCK+G+ +DA L EM
Sbjct: 222 YGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM 281
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF---IF 414
+ PD TY IV C G++ A +M++R + P + T+ A I + F
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ E+ Y ++ + + + YS + K N A+++ M G PN+ +
Sbjct: 342 FEAEELYDEML---PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITF 398
Query: 475 RRVL 478
++
Sbjct: 399 NTLI 402
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 10/209 (4%)
Query: 206 GRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCL 265
G + D T L++ F Y V A L +ISS +V + G C
Sbjct: 425 GLVADTTTYNTLIHGF--YLVGDLNAALDLLQEMISSGLCPD-----IVTCDTLLDGLCD 477
Query: 266 VSGVRALIEMFSVLGLYEM---AKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
++ +EMF V+ + A + E V YNILI + F +L EM
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
G P T+TY+ ++ LCK + +A ++ + M ++ P+ +T+ I C+ G+
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
D F +M +RG+ T+ I G+
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGF 626
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 118/282 (41%), Gaps = 25/282 (8%)
Query: 230 EKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVI 289
E FG + + S KG+ +++ + + S + V ++ V+ E VI
Sbjct: 40 EAGFGGESLKLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVI 99
Query: 290 ---KKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+K ERK + +NILIK C ++ ++G P +T+ +L L
Sbjct: 100 SLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGL 159
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
C + ++A L +M C P+ +T+ + CR G+ A ++M++ GLQP
Sbjct: 160 CVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQ 219
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSS----SNMLYSLLASLHDKNNNPVMAKN 457
T+ + G + D + L + S + ++YS + K+ A+N
Sbjct: 220 ITYGTIVDG---MCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQN 276
Query: 458 VLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSS 499
+ +EM + G+ P++ Y ++ + C S R+S
Sbjct: 277 LFTEMQEKGIFPDLFTYNSMI----------VGFCSSGRWSD 308
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 5/148 (3%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKT-ERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQV 325
++I F G + A+ ++++ ERK+S YN LI + F +L EM
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 354
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P T+TY+ ++ CK + A + M + C P+ IT+ I C + D
Sbjct: 355 GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDG 414
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFI 413
++M + GL T+ I G+++
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGFYL 442
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 126/338 (37%), Gaps = 42/338 (12%)
Query: 172 SEKVSALCFLKYMREIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEK 231
+ VSAL L+ M E+ N I S +ID+ + + + L + + EK
Sbjct: 233 GDTVSALNLLRKMEEV-SHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE-------MQEK 284
Query: 232 AFGFLPVLISSKALT----KKGIWRVVEVLNQ-----------VGGSCLVSGVRALIEMF 276
G P L + ++ G W E L Q V + L++ + F
Sbjct: 285 --GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFF 342
Query: 277 SVLGLYE--MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
LY+ + + +I T Y+ +I C++ + M GC P +T+
Sbjct: 343 EAEELYDEMLPRGIIPNT----ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITF 398
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N ++ C + D ELL EM D TY I VG + A + +M+
Sbjct: 399 NTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMIS 458
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSN----------MLYSLLA 443
GL P + T + G + +DA + + V+ K ++ Y++L
Sbjct: 459 SGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILI 518
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
S + A+ + EM G+ P+ Y ++ L
Sbjct: 519 SGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 1/181 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +N LI C++ +++ M G P +TYN +L LCK G+ D +
Sbjct: 460 VFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFK 519
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+ + C P+ ITY I C+ K + A N +M +GL P + +KG+
Sbjct: 520 LMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNG 579
Query: 416 RYEDAYKYVVLSADKYKSSSNM-LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ AY+ ++YK S + Y+++ + N MA+ + ++M +NG P+ Y
Sbjct: 580 DLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTY 639
Query: 475 R 475
R
Sbjct: 640 R 640
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 83/180 (46%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N L+K + ++ L+ EM + GC P TYN V+ LCK G +DA L+ + +
Sbjct: 394 NTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIA 453
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
+ PD T+ I C+ K D A ++M G+ P + T+ + + G +YED
Sbjct: 454 KGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYED 513
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
L +K + + Y++L K A N++ EM GL P+V + ++K
Sbjct: 514 VMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMK 573
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 81/183 (44%), Gaps = 1/183 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V + I +K CR R LL M GCE + Y V+G + +A EL E
Sbjct: 146 VYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFE 205
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EMLG PD + + I CR G + N+++KRG+ P L T FI+G+
Sbjct: 206 EMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRA 265
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+A + ++ + + + Y+ L KN V A++ L +M+ G P+ Y
Sbjct: 266 MLNEAIR-LLDGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYN 324
Query: 476 RVL 478
++
Sbjct: 325 SII 327
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 54/115 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI +C+ L +M G EP TYN ++ CK G +A ++L
Sbjct: 285 VITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILR 344
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ + PD TY I C+ G D A N FN+ +++GL+P L +KG
Sbjct: 345 DGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKG 399
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 77/182 (42%), Gaps = 1/182 (0%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
NI I+ C+R LL + + G P +TYN ++ LCKN + +A L +M+
Sbjct: 255 NIFIQGFCQRAMLNEAIRLLDGVGR-GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVN 313
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
PD TY I C++G A +G P +T+ + I G +
Sbjct: 314 EGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDR 373
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
A + +K + +L + L + + A +++EM +NG P++ Y V+
Sbjct: 374 AINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVIN 433
Query: 480 HL 481
L
Sbjct: 434 GL 435
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 40/205 (19%), Positives = 78/205 (38%), Gaps = 42/205 (20%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL---- 354
YNIL + C+ + +L+ EM+ G P + + ++ C NG A +L
Sbjct: 533 YNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVD 592
Query: 355 ----------------------------EEMLGRNCH----PDAITYEIFIVYSCRVGKF 382
E++ + C PD+ TY + I C+ G
Sbjct: 593 EQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNI 652
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
+ ++F +++GL P L T + + R +A + L K ++ ++
Sbjct: 653 NSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHK-----GIVPEVV 707
Query: 443 ASLHDKNNNPVMAKNVLSE-MMKNG 466
++ + + V A ++ E +MK G
Sbjct: 708 NTIFEADKKEVAAPKIVVENLMKKG 732
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 73/188 (38%), Gaps = 10/188 (5%)
Query: 235 FLPVLISSKALTKKGIWRVVEVLNQV----GGSCLVSGVRALIEMFSVLGLYEMAKYVIK 290
LP +++ +K + +E+ N V G + + +IE G +E + V+
Sbjct: 5 LLPKHVAAVVKYQKNPLKALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLA 64
Query: 291 KTERKV------SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKN 344
+T + Y ++ R+ + D+ M CEP +YN ++ +L +
Sbjct: 65 ETRMNIDNGLLEGVYIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEY 124
Query: 345 GQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
A ++ M + PD T+ I + CR + A N M +G + +
Sbjct: 125 RYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAY 184
Query: 405 AAFIKGYF 412
I G++
Sbjct: 185 CTVIGGFY 192
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 90/187 (48%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ +I +C+ ++L EM++ G P TYN ++ C +G+ +DA +LL+
Sbjct: 255 VVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQ 314
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EML R PD +TY I + GKF A +++M+ RG+ P T+++ I G+
Sbjct: 315 EMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQN 374
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R + A L A K S + + ++ L + +L EM + GL + + Y
Sbjct: 375 RLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYN 434
Query: 476 RVLKHLH 482
++ +
Sbjct: 435 TLIHGFY 441
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 69/161 (42%)
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G EP TYN ++ L G+ +A EL EEM R PD ITY I C+ + D A
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
F+ M + P + T I GY R +D + + ++ + Y L
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
K N A ++ EM+ +G+ P+ R +L L + +
Sbjct: 626 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEE 666
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 85/184 (46%), Gaps = 7/184 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVG-CEPITLTYNYVLGVLCKNGQDADACELLEEM 357
Y ++ MC++ D +LL +M +V P + Y+ ++ LCK+G+ +DA L EM
Sbjct: 222 YGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM 281
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF---IF 414
+ PD TY IV C G++ A +M++R + P + T+ A I + F
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ E+ Y ++ + + + YS + K N A+++ M G PN+ +
Sbjct: 342 FEAEELYDEML---PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITF 398
Query: 475 RRVL 478
++
Sbjct: 399 NTLI 402
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 10/209 (4%)
Query: 206 GRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCL 265
G + D T L++ F Y V A L +ISS +V + G C
Sbjct: 425 GLVADTTTYNTLIHGF--YLVGDLNAALDLLQEMISSGLCPD-----IVTCDTLLDGLCD 477
Query: 266 VSGVRALIEMFSVLGLYEM---AKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
++ +EMF V+ + A + E V YNILI + F +L EM
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
G P T+TY+ ++ LCK + +A ++ + M ++ P+ +T+ I C+ G+
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
D F +M +RG+ T+ I G+
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGF 626
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 118/282 (41%), Gaps = 25/282 (8%)
Query: 230 EKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVI 289
E FG + + S KG+ +++ + + S + V ++ V+ E VI
Sbjct: 40 EAGFGGESLKLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVI 99
Query: 290 ---KKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+K ERK + + ILIK C ++ ++G P +T+N +L L
Sbjct: 100 SLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGL 159
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
C + ++A L +M C P+ +T+ + CR G+ A ++M++ GLQP
Sbjct: 160 CVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQ 219
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSS----SNMLYSLLASLHDKNNNPVMAKN 457
T+ + G + D + L + S + ++YS + K+ A+N
Sbjct: 220 ITYGTIVDG---MCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQN 276
Query: 458 VLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSS 499
+ +EM + G+ P++ Y ++ + C S R+S
Sbjct: 277 LFTEMQEKGIFPDLFTYNSMI----------VGFCSSGRWSD 308
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 5/148 (3%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKT-ERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQV 325
++I F G + A+ ++++ ERK+S YN LI + F +L EM
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 354
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P T+TY+ ++ CK + A + M + C P+ IT+ I C + D
Sbjct: 355 GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDG 414
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFI 413
++M + GL T+ I G+++
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGFYL 442
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 126/338 (37%), Gaps = 42/338 (12%)
Query: 172 SEKVSALCFLKYMREIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEK 231
+ VSAL L+ M E+ N I S +ID+ + + + L + + EK
Sbjct: 233 GDTVSALNLLRKMEEV-SHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE-------MQEK 284
Query: 232 AFGFLPVLISSKALT----KKGIWRVVEVLNQ-----------VGGSCLVSGVRALIEMF 276
G P L + ++ G W E L Q V + L++ + F
Sbjct: 285 --GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFF 342
Query: 277 SVLGLYE--MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
LY+ + + +I T Y+ +I C++ + M GC P +T+
Sbjct: 343 EAEELYDEMLPRGIIPNT----ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITF 398
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N ++ C + D ELL EM D TY I VG + A + +M+
Sbjct: 399 NTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMIS 458
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSN----------MLYSLLA 443
GL P + T + G + +DA + + V+ K ++ Y++L
Sbjct: 459 SGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILI 518
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
S + A+ + EM G+ P+ Y ++ L
Sbjct: 519 SGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 90/187 (48%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ +I +C+ ++L EM++ G P TYN ++ C +G+ +DA +LL+
Sbjct: 255 VVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQ 314
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EML R PD +TY I + GKF A +++M+ RG+ P T+++ I G+
Sbjct: 315 EMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQN 374
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R + A L A K S + + ++ L + +L EM + GL + + Y
Sbjct: 375 RLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYN 434
Query: 476 RVLKHLH 482
++ +
Sbjct: 435 TLIHGFY 441
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 69/161 (42%)
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G EP TYN ++ L G+ +A EL EEM R PD ITY I C+ + D A
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
F+ M + P + T I GY R +D + + ++ + Y L
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
K N A ++ EM+ +G+ P+ R +L L + +
Sbjct: 626 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEE 666
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 10/209 (4%)
Query: 206 GRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCL 265
G + D T L++ F Y V A L +ISS +V + G C
Sbjct: 425 GLVADTTTYNTLIHGF--YLVGDLNAALDLLQEMISSGLCPD-----IVTCDTLLDGLCD 477
Query: 266 VSGVRALIEMFSVLGLYEM---AKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
++ +EMF V+ + A + E V YNILI + F +L EM
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
G P T+TY+ ++ LCK + +A ++ + M ++ P+ +T+ I C+ G+
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
D F +M +RG+ T+ I G+
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGF 626
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 118/282 (41%), Gaps = 25/282 (8%)
Query: 230 EKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVI 289
E FG + + S KG+ +++ + + S + V ++ V+ E VI
Sbjct: 40 EAGFGGESLKLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVI 99
Query: 290 ---KKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+K ERK + + ILIK C ++ ++G P +T+N +L L
Sbjct: 100 SLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGL 159
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
C + ++A L +M C P+ +T+ + CR G+ A ++M++ GLQP
Sbjct: 160 CVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQ 219
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSS----SNMLYSLLASLHDKNNNPVMAKN 457
T+ + G + D + L + S + ++YS + K+ A+N
Sbjct: 220 ITYGTIVDG---MCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQN 276
Query: 458 VLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSS 499
+ +EM + G+ P++ Y ++ + C S R+S
Sbjct: 277 LFTEMQEKGIFPDLFTYNSMI----------VGFCSSGRWSD 308
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 5/148 (3%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKT-ERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQV 325
++I F G + A+ ++++ ERK+S YN LI + F +L EM
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 354
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P T+TY+ ++ CK + A + M + C P+ IT+ I C + D
Sbjct: 355 GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDG 414
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFI 413
++M + GL T+ I G+++
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGFYL 442
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 126/338 (37%), Gaps = 42/338 (12%)
Query: 172 SEKVSALCFLKYMREIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEK 231
+ VSAL L+ M EI N I S +ID+ + + + L + + EK
Sbjct: 233 GDTVSALDLLRKMEEI-SHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE-------MQEK 284
Query: 232 AFGFLPVLISSKALT----KKGIWRVVEVLNQ-----------VGGSCLVSGVRALIEMF 276
G P L + ++ G W E L Q V + L++ + F
Sbjct: 285 --GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFF 342
Query: 277 SVLGLYE--MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
LY+ + + +I T Y+ +I C++ + M GC P +T+
Sbjct: 343 EAEELYDEMLPRGIIPNT----ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITF 398
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N ++ C + D ELL EM D TY I VG + A + +M+
Sbjct: 399 NTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMIS 458
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSN----------MLYSLLA 443
GL P + T + G + +DA + + V+ K ++ Y++L
Sbjct: 459 SGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILI 518
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
S + A+ + EM G+ P+ Y ++ L
Sbjct: 519 SGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 90/187 (48%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ +I +C+ ++L EM++ G P TYN ++ C +G+ +DA +LL+
Sbjct: 255 VVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQ 314
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EML R PD +TY I + GKF A +++M+ RG+ P T+++ I G+
Sbjct: 315 EMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQN 374
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R + A L A K S + + ++ L + +L EM + GL + + Y
Sbjct: 375 RLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYN 434
Query: 476 RVLKHLH 482
++ +
Sbjct: 435 TLIHGFY 441
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 69/161 (42%)
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G EP TYN ++ L G+ +A EL EEM R PD ITY I C+ + D A
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
F+ M + P + T I GY R +D + + ++ + Y L
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
K N A ++ EM+ +G+ P+ R +L L + +
Sbjct: 626 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEE 666
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 85/184 (46%), Gaps = 7/184 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVG-CEPITLTYNYVLGVLCKNGQDADACELLEEM 357
Y ++ MC++ D +LL +M +V P + Y+ ++ LCK+G+ +DA L EM
Sbjct: 222 YGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM 281
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF---IF 414
+ PD TY IV C G++ A +M++R + P + T+ A I + F
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ E+ Y ++ + + + YS + K N A+++ M G PN+ +
Sbjct: 342 FEAEELYDEML---PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITF 398
Query: 475 RRVL 478
++
Sbjct: 399 NTLI 402
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 10/209 (4%)
Query: 206 GRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCL 265
G + D T L++ F Y V A L +ISS +V + G C
Sbjct: 425 GLVADTTTYNTLIHGF--YLVGDLNAALDLLQEMISSGLCPD-----IVTCDTLLDGLCD 477
Query: 266 VSGVRALIEMFSVLGLYEM---AKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
++ +EMF V+ + A + E V YNILI + F +L EM
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
G P T+TY+ ++ LCK + +A ++ + M ++ P+ +T+ I C+ G+
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
D F +M +RG+ T+ I G+
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGF 626
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 118/282 (41%), Gaps = 25/282 (8%)
Query: 230 EKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVI 289
E FG + + S KG+ +++ + + S + V ++ V+ E VI
Sbjct: 40 EAGFGGESLKLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVI 99
Query: 290 ---KKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+K ERK + +NILIK C ++ ++G P +T+ +L L
Sbjct: 100 SLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGL 159
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
C + ++A + +M C P+ +T+ + CR G+ A ++M++ GLQP
Sbjct: 160 CVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQ 219
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSS----SNMLYSLLASLHDKNNNPVMAKN 457
T+ + G + D + L + S + ++YS + K+ A+N
Sbjct: 220 ITYGTIVDG---MCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQN 276
Query: 458 VLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSS 499
+ +EM + G+ P++ Y ++ + C S R+S
Sbjct: 277 LFTEMQEKGIFPDLFTYNSMI----------VGFCSSGRWSD 308
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 5/148 (3%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKT-ERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQV 325
++I F G + A+ ++++ ERK+S YN LI + F +L EM
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 354
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P T+TY+ ++ CK + A + M + C P+ IT+ I C + D
Sbjct: 355 GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDG 414
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFI 413
++M + GL T+ I G+++
Sbjct: 415 MELLHEMTETGLVADTTTYNTLIHGFYL 442
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 126/338 (37%), Gaps = 42/338 (12%)
Query: 172 SEKVSALCFLKYMREIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEK 231
+ VSAL L+ M E+ N I S +ID+ + + + L + + EK
Sbjct: 233 GDTVSALNLLRKMEEV-SHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE-------MQEK 284
Query: 232 AFGFLPVLISSKALT----KKGIWRVVEVLNQ-----------VGGSCLVSGVRALIEMF 276
G P L + ++ G W E L Q V + L++ + F
Sbjct: 285 --GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFF 342
Query: 277 SVLGLYE--MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
LY+ + + +I T Y+ +I C++ + M GC P +T+
Sbjct: 343 EAEELYDEMLPRGIIPNT----ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITF 398
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N ++ C + D ELL EM D TY I VG + A + +M+
Sbjct: 399 NTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMIS 458
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSN----------MLYSLLA 443
GL P + T + G + +DA + + V+ K ++ Y++L
Sbjct: 459 SGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILI 518
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
S + A+ + EM G+ P+ Y ++ L
Sbjct: 519 SGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556
>gi|297719649|ref|NP_001172186.1| Os01g0151900 [Oryza sativa Japonica Group]
gi|9663979|dbj|BAB03620.1| hypothetical protein [Oryza sativa Japonica Group]
gi|13872936|dbj|BAB44041.1| hypothetical protein [Oryza sativa Japonica Group]
gi|215768885|dbj|BAH01114.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255672883|dbj|BAH90916.1| Os01g0151900 [Oryza sativa Japonica Group]
Length = 534
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 141/352 (40%), Gaps = 37/352 (10%)
Query: 132 QVSEIIELL--RSGDSETESKLLSMSVSLSNASVIEILRVLNSEKVSALCFLKYMREIMP 189
VSEI+++L R GDSE L + + V+++L+ S AL F K+ +P
Sbjct: 82 HVSEIVKILKSRDGDSELAEVLNQFADEMDEDVVLKVLQKQRSNWKVALSFFKWAAG-LP 140
Query: 190 EFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNV--YQVCLNEKAFGFLPVLISSKALTK 247
++ S + ++D GR+ MRQL ++ V Q + + F L
Sbjct: 141 QYNHGSRAYTEMLDILGRMKKVRLMRQLFDEIPVESRQSVVTNRMFAVL----------- 189
Query: 248 KGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMC 307
LN+ G+ V+ I+MF Y+ Y E + + IL+ +C
Sbjct: 190 ---------LNRYAGA---HKVQEAIDMF-----YKRKDYGF---ELDLVGFQILLMSLC 229
Query: 308 RRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAI 367
R + L ++ ++ P+ ++N +L C G ADA + E++ PD
Sbjct: 230 RYKHVEEAEALFLQ-KKDEFPPVIKSWNIILNGWCVKGSLADAKRVWNEIIASKLKPDLF 288
Query: 368 TYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLS 427
TY FI + GK A F M ++G+ P +A I R +A +
Sbjct: 289 TYGTFINSLTKSGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKRIPEALEIFGEM 348
Query: 428 ADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
D+ + Y+ L K N +L +M G+ PN Y +LK
Sbjct: 349 NDRGCQADVATYNTLIKHFCKINRMEKVYELLDDMEVKGVSPNNMTYSYILK 400
>gi|125524449|gb|EAY72563.1| hypothetical protein OsI_00429 [Oryza sativa Indica Group]
Length = 535
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 141/352 (40%), Gaps = 37/352 (10%)
Query: 132 QVSEIIELL--RSGDSETESKLLSMSVSLSNASVIEILRVLNSEKVSALCFLKYMREIMP 189
VSEI+++L R GDSE L S + V+++L+ S AL F K+ +P
Sbjct: 82 HVSEIVKILKSRDGDSELAEVLNQFSDEMDEDVVLKVLQKQRSNWKVALSFFKWAAG-LP 140
Query: 190 EFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNV--YQVCLNEKAFGFLPVLISSKALTK 247
++ S + ++D GR+ MRQL ++ + Q + + F L
Sbjct: 141 QYNHGSRAYTEMLDILGRMKKVRLMRQLFDEIPMESRQSVITNRMFAVL----------- 189
Query: 248 KGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMC 307
LN+ G+ V+ I+MF Y+ Y E + + IL+ +C
Sbjct: 190 ---------LNRYAGA---HKVQEAIDMF-----YKRKDYGF---ELDLVGFQILLMSLC 229
Query: 308 RRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAI 367
R + L ++ ++ P+ ++N +L C G ADA + E++ PD
Sbjct: 230 RYKHVEEAEALFLQ-KKDEFPPVIKSWNIILNGWCVKGSLADAKRVWNEIIASKLKPDLF 288
Query: 368 TYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLS 427
TY FI + GK A F M ++G+ P +A I R +A +
Sbjct: 289 TYGTFINSLTKSGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKRIPEALEIFGEM 348
Query: 428 ADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
D+ + Y+ L K N +L +M G+ PN Y +LK
Sbjct: 349 NDRGCQADVATYNTLIKHFCKINRMEKVYELLDDMEVKGVSPNNMTYSYILK 400
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 90/185 (48%), Gaps = 7/185 (3%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+IL +C+R +L+ EM GC P +TYN ++ LCK + A ELLE
Sbjct: 366 VVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLE 425
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
++ PD +TY I + C+ G+ D A M+KRG P + T+ A ++G
Sbjct: 426 SLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTG 485
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLR--PNVSV 473
R ++A+ K ++ + Y L + + K++ A+ V+ +G+R P + V
Sbjct: 486 RVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVV-----DGIRGTPYIDV 540
Query: 474 YRRVL 478
Y ++
Sbjct: 541 YNALM 545
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 90/206 (43%), Gaps = 9/206 (4%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I CR+ D G + L EM + P TYN ++ LCK + A E+L EM+
Sbjct: 229 YNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMV 288
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R PD +T+ + C+ GKF+ A + M +R +P T+ I G +
Sbjct: 289 DRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVD 348
Query: 419 DAYKYVVLSADKYKSSS----NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
A V D++ SS + YS+LA K A ++ EM G PN+ Y
Sbjct: 349 RAKDLV----DEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTY 404
Query: 475 RRVLKHL-HTSHQEHMAKCLSSRYSS 499
++ L S E + L S SS
Sbjct: 405 NTLIDGLCKASKTEKAYELLESLVSS 430
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 93/200 (46%), Gaps = 4/200 (2%)
Query: 286 KYVIKKTERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+++ + ERKV+ YNILI +C+ ++L EM G P T+T+N ++ L
Sbjct: 247 EFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGL 306
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
CK G+ A LL M RNC P TY I C+ D A + ++ V G P +
Sbjct: 307 CKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDV 366
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
T++ G R ++A++ V + K + + + Y+ L K + A +L
Sbjct: 367 VTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLES 426
Query: 462 MMKNGLRPNVSVYRRVLKHL 481
++ +G P+V Y ++ L
Sbjct: 427 LVSSGFVPDVVTYTIIVDGL 446
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 5/207 (2%)
Query: 269 VRALIEMFSVLGLYEM-AKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGC 327
+++L +M + + M K ++ + +VS Y IL + C+ K D L R +
Sbjct: 167 IKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLK---DALEIFRNIP- 222
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
P + YN ++ C+ A E L+EM R PD TY I I C+ K D A
Sbjct: 223 SPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASE 282
Query: 388 FFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHD 447
++MV RG+ P T + + G ++E A+ + + A++ S Y+ L S
Sbjct: 283 MLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLC 342
Query: 448 KNNNPVMAKNVLSEMMKNGLRPNVSVY 474
K N AK+++ E + +G P+V Y
Sbjct: 343 KQQNVDRAKDLVDEFVSSGFVPDVVTY 369
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C++ + +DL+ E G P +TY+ + LCK G+ +A EL++EM
Sbjct: 334 YNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMS 393
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
G+ C P+ +TY I C+ K + A+ +V G P + T+ + G R +
Sbjct: 394 GKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLD 453
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
A K V + + S + Y+ L + A ++ EM+ + Y
Sbjct: 454 KALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAY 509
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 76/171 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ YN L+ C+ ++ +M GC P TYN V+ LCK+G+ +A LE
Sbjct: 538 IDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLE 597
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M C PD ++Y I I + K A +QM++ G+ P T+ + +
Sbjct: 598 SMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEE 657
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNG 466
R++DA + N+ Y+ L S + N A ++ EM++NG
Sbjct: 658 RFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNG 708
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 114/267 (42%), Gaps = 18/267 (6%)
Query: 234 GFLPVLIS----SKALTKKG----IWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMA 285
GF+P +++ L K+G ++VE + + G + V AL+E G + A
Sbjct: 431 GFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEA 490
Query: 286 KYVIKK------TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
++ K+ T ++Y + L+ C+ K + ++ +R P YN ++
Sbjct: 491 HHIFKEMVSKDCTADALAYVS-LVNGYCKSSRTKEAQKVVDGIRGT---PYIDVYNALMD 546
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
CK G+ + + E+M R C P+ TY I + C+ GK D AF F M G P
Sbjct: 547 GYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVP 606
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
+ ++ I G F + ++A + + + Y+ L + K A +L
Sbjct: 607 DVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGIL 666
Query: 460 SEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
M+K G+ P+ Y ++ L +++
Sbjct: 667 KNMIKAGVDPDNVTYNTLISGLSQTNR 693
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 64/151 (42%), Gaps = 4/151 (2%)
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN 390
T T N L L +NG + E ML PD+ TY + I C++ + D AF +
Sbjct: 125 TFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLD 184
Query: 391 QMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNN 450
+ RG +P ++ + + + R +DA + S + Y+ + H + N
Sbjct: 185 KAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIF----RNIPSPDAIAYNAIIHGHCRKN 240
Query: 451 NPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ A L EM + + P+V Y ++ L
Sbjct: 241 DCDGALEFLKEMNERKVAPDVFTYNILIDGL 271
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ + C+ F +L M + G +P +TYN ++ L + + DA EL+ EML
Sbjct: 646 YNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEML 705
Query: 359 GRNCHPDA-ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
C A TY I C+ G A + M G++ T+ FI
Sbjct: 706 RNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFI 756
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 2/117 (1%)
Query: 295 KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPIT-LTYNYVLGVLCKNGQDADACEL 353
+VSY ++I +C+ L EM V IT T+N ++ K + +A L
Sbjct: 781 EVSYTTVIIG-LCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTL 839
Query: 354 LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
L M+ R C P ITY + I C++ K D A+ F++M RG+ ++ I G
Sbjct: 840 LGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYG 896
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 81/185 (43%), Gaps = 5/185 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCE-PITLTYNYVLGVLCKNGQDADACELLEEM 357
YN LI + + +L+ EM + GC TYN ++ LCK G A L++ M
Sbjct: 681 YNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHM 740
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
G + +TY IFI C+ G+ D A + ++M L+ + ++ I G +
Sbjct: 741 TGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM--DTLRDEV-SYTTVIIGLCKAEQL 797
Query: 418 EDAYKYV-VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
+ A K + A K ++ ++LL K A +L M++ G P+V Y
Sbjct: 798 DRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNM 857
Query: 477 VLKHL 481
V+ L
Sbjct: 858 VITCL 862
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 42/95 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N+LI + LL M Q GC P +TYN V+ LCK + A EL +EM
Sbjct: 820 FNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMA 879
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
R +++Y + I C G+ A +M
Sbjct: 880 VRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMA 914
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 64/160 (40%), Gaps = 4/160 (2%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M G P + TY+ V+ LC+ Q A +L++ R P+ Y I C+ G+
Sbjct: 151 MLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGR 210
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
A F + P + A I G+ + A +++ ++ + Y++
Sbjct: 211 LKDALEIFRNIP----SPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNI 266
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
L K + A +L EM+ G+ P+ + ++ L
Sbjct: 267 LIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGL 306
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 269 VRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCE 328
+ L E ++LGL V + V YN++I +C+ +L EM G
Sbjct: 830 TKRLDEALTLLGLM-----VQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIV 884
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYE 370
+++Y ++ LC G+ +A ++LEEM +C D + +E
Sbjct: 885 ASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKWE 926
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 5/207 (2%)
Query: 280 GLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
G + A + K+ E K V YN L++ +C+ + LL +M P +T+
Sbjct: 242 GCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITF 301
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N +L V K G+ +A EL +EM+ R P+ ITY + C + A N + MV+
Sbjct: 302 NVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR 361
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM 454
P + T + IKGY + R +D K + + ++ + YS+L ++ +
Sbjct: 362 NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKL 421
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A+ + EM+ +G+ P+V Y +L L
Sbjct: 422 AEELFQEMVSHGVLPDVMTYGILLDGL 448
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 5/203 (2%)
Query: 276 FSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYN 335
+SVLG Y E + +N LIK + L+ M + GC+P +TYN
Sbjct: 143 YSVLGKVMKLGY-----EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYN 197
Query: 336 YVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR 395
++ +C++G + A +LL +M RN D TY I CR G D A + F +M +
Sbjct: 198 SIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK 257
Query: 396 GLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMA 455
G++ + T+ + ++G ++ D + + + + +++L + K A
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317
Query: 456 KNVLSEMMKNGLRPNVSVYRRVL 478
+ EM+ G+ PN+ Y ++
Sbjct: 318 NELYKEMITRGISPNIITYNTLM 340
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 82/190 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+IL++ C+ K +L EM G P +TY +L LC NG+ A E+ E++
Sbjct: 406 YSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 465
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ Y I C+ GK + A+N F + +G++P + T+ I G
Sbjct: 466 KSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLS 525
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + + + ++ Y+ L H ++ + + ++ EM G + S + V+
Sbjct: 526 EANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 585
Query: 479 KHLHTSHQEH 488
L + +
Sbjct: 586 DMLLSGELDK 595
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 1/161 (0%)
Query: 332 LTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQ 391
+TY+ ++ C++G+ A EL +EM+ PD +TY I + C GK + A F
Sbjct: 404 VTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFED 463
Query: 392 MVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNN 451
+ K + + + I+G + EDA+ K + M Y+++ S K +
Sbjct: 464 LQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGS 523
Query: 452 PVMAKNVLSEMMKNGLRPNVSVYRRVLK-HLHTSHQEHMAK 491
A +L +M ++G PN Y +++ HL AK
Sbjct: 524 LSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAK 564
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 24/117 (20%), Positives = 50/117 (42%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y IL+ +C + ++ ++++ + + Y ++ +CK G+ DA L
Sbjct: 438 VMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFC 497
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+ + P+ +TY + I C+ G A +M + G P T+ I+ +
Sbjct: 498 SLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 554
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 43/102 (42%)
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
K + + Y +I+ MC+ + +L + G +P +TY ++ LCK G ++A
Sbjct: 468 KMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 527
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
LL +M P+ TY I R G + +M
Sbjct: 528 NILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569
>gi|125569053|gb|EAZ10568.1| hypothetical protein OsJ_00400 [Oryza sativa Japonica Group]
Length = 514
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 141/352 (40%), Gaps = 37/352 (10%)
Query: 132 QVSEIIELL--RSGDSETESKLLSMSVSLSNASVIEILRVLNSEKVSALCFLKYMREIMP 189
VSEI+++L R GDSE L + + V+++L+ S AL F K+ +P
Sbjct: 62 HVSEIVKILKSRDGDSELAEVLNQFADEMDEDVVLKVLQKQRSNWKVALSFFKWAAG-LP 120
Query: 190 EFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNV--YQVCLNEKAFGFLPVLISSKALTK 247
++ S + ++D GR+ MRQL ++ V Q + + F L
Sbjct: 121 QYNHGSRAYTEMLDILGRMKKVRLMRQLFDEIPVESRQSVVTNRMFAVL----------- 169
Query: 248 KGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMC 307
LN+ G+ V+ I+MF Y+ Y E + + IL+ +C
Sbjct: 170 ---------LNRYAGA---HKVQEAIDMF-----YKRKDYGF---ELDLVGFQILLMSLC 209
Query: 308 RRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAI 367
R + L ++ ++ P+ ++N +L C G ADA + E++ PD
Sbjct: 210 RYKHVEEAEALFLQ-KKDEFPPVIKSWNIILNGWCVKGSLADAKRVWNEIIASKLKPDLF 268
Query: 368 TYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLS 427
TY FI + GK A F M ++G+ P +A I R +A +
Sbjct: 269 TYGTFINSLTKSGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKRIPEALEIFGEM 328
Query: 428 ADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
D+ + Y+ L K N +L +M G+ PN Y +LK
Sbjct: 329 NDRGCQADVATYNTLIKHFCKINRMEKVYELLDDMEVKGVSPNNMTYSYILK 380
>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
Length = 796
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 87/187 (46%), Gaps = 2/187 (1%)
Query: 296 VSYYNILIKEMCR-RCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
V YN L+ + RC R LL EMR G +P +T+N V+ LCK G+ +A L
Sbjct: 349 VVTYNTLVDACFKWRCSSDALR-LLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKL 407
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
E++ PD ITY I C+ G AF ++MV +GL+ T +
Sbjct: 408 EKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKM 467
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
RYEDA + + + + Y + + + K NP A + +M++ L P++S Y
Sbjct: 468 KRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTY 527
Query: 475 RRVLKHL 481
++K L
Sbjct: 528 NTLIKGL 534
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 1/181 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ CR+ R LL M++ G P TYN ++ + G A +++E M
Sbjct: 246 YNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMT 305
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ-PRLATHAAFIKGYFIFYRY 417
PD TY + + C+ GK D AF ++M + G P + T+ + F +
Sbjct: 306 AYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCS 365
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
DA + + DK + + ++++ K A L ++ + GL P+V Y +
Sbjct: 366 SDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTL 425
Query: 478 L 478
+
Sbjct: 426 I 426
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 98/246 (39%), Gaps = 38/246 (15%)
Query: 283 EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLC 342
++ ++V K + YNI+I C+ D + +M + +P +T N ++ LC
Sbjct: 546 KLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLC 605
Query: 343 KNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLA 402
+G+ A +L E + + D ITY I C+VG D A +FF+ M +GLQP
Sbjct: 606 LHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAF 665
Query: 403 THAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL-------ASLHDKNNNPVM- 454
T+ + R E+A+ + AD K S + LL A + + P
Sbjct: 666 TYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAE 725
Query: 455 ----------------------------AKNVLSEMMKNGLRPNVSVYRRVLKHL--HTS 484
AK VL EMM+ G+ + S Y +++ L
Sbjct: 726 SSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIKRQK 785
Query: 485 HQEHMA 490
Q H A
Sbjct: 786 RQTHAA 791
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 88/198 (44%), Gaps = 3/198 (1%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L EM +K T + +NI++K +C+ + L ++ + G P +TYN ++
Sbjct: 372 LEEMRDKGVKPT---LVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDA 428
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
CK G A A L++EM+G+ D T + C++ +++ A + +RG P
Sbjct: 429 YCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPD 488
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
++ + YF Y E A + ++ S Y+ L + A + L+
Sbjct: 489 EVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLN 548
Query: 461 EMMKNGLRPNVSVYRRVL 478
E ++ GL P+ + Y ++
Sbjct: 549 EFVEKGLVPDETTYNIII 566
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 3/165 (1%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
D ++E + + P TYN ++ LC+ + +A + L E + + PD TY I I
Sbjct: 513 DQMIERKLI---PSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAY 569
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
C+ G + AF F N+MV+ +P + T + G + + + A K +K K
Sbjct: 570 CKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDV 629
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ Y+ L K + A + +M GL+P+ Y VL L
Sbjct: 630 ITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSAL 674
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI C+ + L+ EM G + T T N VL LCK + DA ELL
Sbjct: 419 VITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLH 478
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
R PD ++Y + + + A ++QM++R L P ++T+ IKG
Sbjct: 479 SPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRME 538
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
R ++A + +K Y+++ + K + A ++M++N +P+V
Sbjct: 539 RLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDV 594
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 3/106 (2%)
Query: 319 LVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCR 378
L+E+R P T+N ++ C G ADA L M G PDA+TY + CR
Sbjct: 199 LIELR---LHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCR 255
Query: 379 VGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV 424
G A +M + G+ P T+ + + + A K V
Sbjct: 256 KGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVV 301
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 278 VLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYV 337
L L+E +V K + V YN LI+ MC+ D +M G +P TYN V
Sbjct: 613 ALKLFE--SWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVV 670
Query: 338 LGVLCKNGQDADACELLEEM 357
L L + G+ +A +L ++
Sbjct: 671 LSALSEAGRSEEAHNMLHKL 690
>gi|357512639|ref|XP_003626608.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240852|gb|ABD32710.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355501623|gb|AES82826.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 451
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 84/175 (48%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ +CR+ + LL M+ GC P + YN V+ C+ G+ DAC+++++M
Sbjct: 255 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVILGFCREGRAHDACKVIDDMQ 314
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C P+ ++Y + C +G D A + +M+ +G P A A +KG+ R E
Sbjct: 315 ANGCLPNLVSYRTLVNGLCHLGMLDEATKYVEEMLSKGFSPHFAVIHALVKGFCNVGRIE 374
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
+A + S + ++ + ++ + ++ V VL E++K ++ + +
Sbjct: 375 EACGVLTKSLEHREAPHKDTWMIIVPQICEVDDGVKIDGVLEEVLKIEIKGDTRI 429
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
DL + + G P T +YN ++ C NG + A L +M R+ PD +Y I +
Sbjct: 168 DLFKDAHKHGVFPDTKSYNILMRAFCLNGDISIAYTLFNKMFKRDVVPDIQSYRILMQAL 227
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
CR + + A + F M+ +G P T+ + + +AYK + K +
Sbjct: 228 CRKSQVNGAVDLFEDMLNKGFVPDSFTYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 287
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ Y+ + + A V+ +M NG PN+ YR ++ L
Sbjct: 288 VHYNTVILGFCREGRAHDACKVIDDMQANGCLPNLVSYRTLVNGL 332
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 55/126 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNIL++ C D L +M + P +Y ++ LC+ Q A +L E+ML
Sbjct: 185 YNILMRAFCLNGDISIAYTLFNKMFKRDVVPDIQSYRILMQALCRKSQVNGAVDLFEDML 244
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD+ TY + CR K A+ +M +G P + + I G+ R
Sbjct: 245 NKGFVPDSFTYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVILGFCREGRAH 304
Query: 419 DAYKYV 424
DA K +
Sbjct: 305 DACKVI 310
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 87/187 (46%), Gaps = 2/187 (1%)
Query: 296 VSYYNILIKEMCR-RCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
V YN L+ + RC R LL EMR G +P +T+N V+ LCK G+ +A L
Sbjct: 349 VVTYNTLVDACFKWRCSSDALR-LLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKL 407
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
E++ PD ITY I C+ G AF ++MV +GL+ T +
Sbjct: 408 EKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKM 467
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
RYEDA + + + + Y + + + K NP A + +M++ L P++S Y
Sbjct: 468 KRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTY 527
Query: 475 RRVLKHL 481
++K L
Sbjct: 528 NTLIKGL 534
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 92/232 (39%), Gaps = 38/232 (16%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
+ YNI+I C+ D + +M + +P +T N ++ LC +G+ A +L E
Sbjct: 560 TTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFES 619
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
+ + D ITY I C+VG D A +FF+ M +GLQP T+ + R
Sbjct: 620 WVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGR 679
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLL-------ASLHDKNNNPVM--------------- 454
E+A+ + AD K S + LL A + + P
Sbjct: 680 SEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYM 739
Query: 455 --------------AKNVLSEMMKNGLRPNVSVYRRVLKHL--HTSHQEHMA 490
AK VL EMM+ G+ + S Y +++ L Q H A
Sbjct: 740 ERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIKRQKRQTHAA 791
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 1/181 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ CR+ R LL M++ G P TYN ++ + G A +++E M
Sbjct: 246 YNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMT 305
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ-PRLATHAAFIKGYFIFYRY 417
PD TY + V C+ GK D AF ++M + P + T+ + F +
Sbjct: 306 AYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCS 365
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
DA + + DK + + ++++ K A L ++ + GL P+V Y +
Sbjct: 366 SDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTL 425
Query: 478 L 478
+
Sbjct: 426 I 426
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 89/198 (44%), Gaps = 3/198 (1%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L EM +K T + +NI++K +C+ + L ++ + G P +TYN ++
Sbjct: 372 LEEMRDKGVKPT---LVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDA 428
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
CK G A A L++EM+G+ D T + C++ +++ A + +RG P
Sbjct: 429 YCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPD 488
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
++ + YF Y E A + ++ S Y+ L + A + L+
Sbjct: 489 EVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLN 548
Query: 461 EMMKNGLRPNVSVYRRVL 478
E+++ GL P+ + Y ++
Sbjct: 549 ELVEKGLVPDETTYNIII 566
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 3/165 (1%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
D ++E + + P TYN ++ LC+ + +A + L E++ + PD TY I I
Sbjct: 513 DQMIERKLI---PSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAY 569
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
C+ G + AF F N+MV+ +P + T + G + + + A K +K K
Sbjct: 570 CKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDV 629
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ Y+ L K + A + +M GL+P+ Y VL L
Sbjct: 630 ITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSAL 674
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI C+ + L+ EM G + T T N VL LCK + DA ELL
Sbjct: 419 VITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLH 478
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
R PD ++Y + + + A ++QM++R L P ++T+ IKG
Sbjct: 479 SPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRME 538
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
R ++A + +K Y+++ + K + A ++M++N +P+V
Sbjct: 539 RLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDV 594
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 72/188 (38%), Gaps = 9/188 (4%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N+L+ C + L M+ G P +TYN +L C+ G +A LL M
Sbjct: 211 FNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMK 270
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P TY + R+G A M G +P L T+ G + +
Sbjct: 271 RDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVD 330
Query: 419 DAYKYVVLSADKYKSSSNML-----YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
+A++ D+ + S L Y+ L K A +L EM G++P +
Sbjct: 331 EAFRL----KDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVT 386
Query: 474 YRRVLKHL 481
+ V+K L
Sbjct: 387 HNIVVKSL 394
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 3/106 (2%)
Query: 319 LVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCR 378
L+E+R P T+N ++ C G ADA L M G PDA+TY + CR
Sbjct: 199 LIELR---LHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCR 255
Query: 379 VGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV 424
G A +M + G+ P T+ + + + A K V
Sbjct: 256 KGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVV 301
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 278 VLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYV 337
L L+E +V K + V YN LI+ MC+ D +M G +P TYN V
Sbjct: 613 ALKLFE--SWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVV 670
Query: 338 LGVLCKNGQDADACELLEEM 357
L L + G+ +A +L ++
Sbjct: 671 LSALSEAGRSEEAHNMLHKL 690
>gi|147797511|emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera]
Length = 814
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 77/175 (44%), Gaps = 1/175 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI C+ D+L EM G P +TYN ++ CKNG A L
Sbjct: 592 VVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLS 651
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+G+ P+ ITY I C G+ D A + +N+M +G P + A I G
Sbjct: 652 RMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHG-LCKC 710
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
+ DA + ++ ++Y L + N NP +A +L EM+ G P+
Sbjct: 711 GWPDAALLYFREMGERETPDTIVYVALITSFISNKNPTLAFEILKEMVAKGKFPD 765
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 80/183 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N + +CRR D G D++ EMR G EP Y ++ LCK + A+AC L EM+
Sbjct: 490 HNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMV 549
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD + Y I ++ D A F + RG P + + I G+ R
Sbjct: 550 REGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVS 609
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A+ + K S + Y+LL KN + A + LS M+ PNV Y ++
Sbjct: 610 EAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLI 669
Query: 479 KHL 481
L
Sbjct: 670 DGL 672
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 84/195 (43%), Gaps = 1/195 (0%)
Query: 277 SVLGLYEMAKYV-IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYN 335
V G +M + + + E + +Y +L+K++C+R + L EM + G P + Y+
Sbjct: 502 DVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYS 561
Query: 336 YVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR 395
+ K A E+ ++ R PD + Y I C+V + A + ++MV +
Sbjct: 562 AAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAK 621
Query: 396 GLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMA 455
GL P + T+ I G+ + A+ + K + + + Y+ L P A
Sbjct: 622 GLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDA 681
Query: 456 KNVLSEMMKNGLRPN 470
++ +EM G PN
Sbjct: 682 IHLWNEMRGKGCSPN 696
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 77/182 (42%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
++ V YN LI ++ + LL EM+ G P T+N + G LC+ A +
Sbjct: 449 KQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALD 508
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
++ EM P Y + + C+ + A NF +MV+ G P + ++A I G+
Sbjct: 509 MVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFV 568
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
+ A + + + Y+ L + K A ++L EM+ GL P+V
Sbjct: 569 KIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVV 628
Query: 473 VY 474
Y
Sbjct: 629 TY 630
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 82/209 (39%), Gaps = 22/209 (10%)
Query: 319 LVEMR-----QVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFI 373
LVEMR G EP T VL C + + A + E+ GR D I +
Sbjct: 177 LVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRG-WVDGHVLSILV 235
Query: 374 VYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK-YVVLSADKYK 432
+ + G+ D AF +M G++ T I G+ R + A + + + +
Sbjct: 236 LTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFA 295
Query: 433 SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN--------------VSVYRRVL 478
++ +L+ L K A ++LSEM + G+ P+ V +YR +
Sbjct: 296 PDVSVYDALIGGLCAKKEIE-KALHLLSEMKELGIDPDIQILSKLIPYCSEEVDIYRLIE 354
Query: 479 KHLHTSHQEHMAKCLSSRYSSLSLGSSVE 507
+ L E M +S + L G SV+
Sbjct: 355 ERLEDLDTEAMLLLYNSVLNGLVNGKSVD 383
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 105/247 (42%), Gaps = 25/247 (10%)
Query: 247 KKGI-WRVVEVLNQVGGSCLVSGVRALIEMFSVLG-----------LYEMAKYVIKKTER 294
K G+ W V+ + ++GG+ + AL+ + LG L EM K I+ +
Sbjct: 261 KNGVAWEVLHCVMRLGGAVDAASCNALL---TWLGRGRDIKRMNELLAEMEKRKIRPS-- 315
Query: 295 KVSYYNILIKEMCRRCDFKGPRDLLVEMR------QVGCEPITLTYNYVLGVLCKNGQDA 348
V + IL+ +C+ + +R VG EP + +N ++ LCK G++
Sbjct: 316 -VVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEE 374
Query: 349 DACELLEEM-LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAF 407
D LLEEM +G P+ +TY I + G FD A F QM + G+QP + T
Sbjct: 375 DGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTL 434
Query: 408 IKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
+ G R A ++ K + Y+ L S NN A EM+ +G
Sbjct: 435 VDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGC 494
Query: 468 RPNVSVY 474
P+ VY
Sbjct: 495 SPDAVVY 501
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 108/264 (40%), Gaps = 12/264 (4%)
Query: 244 ALTKKG-IWRVVEVLNQVGGSCL---VSGVRALIEMFSVLGLYEMAKYVIKK------TE 293
L K G + R VE N++ G L + ALI F + A ++ +
Sbjct: 437 GLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSP 496
Query: 294 RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACEL 353
V YY+ LI +C ++ +++ G YN ++ CK + EL
Sbjct: 497 DAVVYYS-LISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYEL 555
Query: 354 LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
L EM PD ITY I Y + G F A +M+K GL+P + T+ A I Y
Sbjct: 556 LTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCS 615
Query: 414 FYRYEDAYKYVVLSADKYKSSSN-MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
++ K K N ++Y++L +NN+ A +++ +M +RPN +
Sbjct: 616 KKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTT 675
Query: 473 VYRRVLKHLHTSHQEHMAKCLSSR 496
Y +LK + H A L R
Sbjct: 676 TYNAILKGVRDKKMLHKAFELMDR 699
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 125/329 (37%), Gaps = 50/329 (15%)
Query: 198 CSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVL 257
C+ ++ GR D + M +LL + ++ + FG L V KA +V + L
Sbjct: 284 CNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGIL-VNHLCKARRIDEALQVFDRL 342
Query: 258 NQVGGSCLVSGVRALIEMFSVL------------GLYEMAKYVIKKTER-KVSYYNILIK 304
GGS V GV + +F+ L GL + + + R YN LI
Sbjct: 343 RGKGGSNWV-GVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLID 401
Query: 305 EMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL---------- 354
+ +F +L +M + G +P +T N ++ LCK+G+ A E
Sbjct: 402 GFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKG 461
Query: 355 -------------------------EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFF 389
EEML C PDA+ Y I C G+ + A
Sbjct: 462 NAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVV 521
Query: 390 NQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKN 449
+++ G + + I G+ + E Y+ + + + Y+ L S K
Sbjct: 522 SKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKT 581
Query: 450 NNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ A V+ +M+K GLRP+V Y ++
Sbjct: 582 GDFATASKVMEKMIKEGLRPSVVTYGAII 610
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 43/90 (47%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNILI +CR D L+ +M+ P T TYN +L + A EL++ M+
Sbjct: 642 YNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMV 701
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
C PD IT E+ + VG+ + +F
Sbjct: 702 EEACRPDYITMEVLTEWLSAVGEIEKLKHF 731
>gi|255660998|gb|ACU25668.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 376
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 92/184 (50%), Gaps = 2/184 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI + F+ + EM V C P +TYN ++ LCKN +A +L++EML
Sbjct: 167 YNTLINGLVGASKFEDAIRVFREMGTVRCSPTIITYNTLINGLCKNEMFGEAYDLVKEML 226
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ +P ITY + + C K + A +NQ++ +G +P + H I G + +
Sbjct: 227 EKGLNPSVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQ 286
Query: 419 DAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
A + J +++K + N++ ++ L K+ + A + + +++NGL P++ Y
Sbjct: 287 LALS-LYJDMNRWKCAPNLVTHNTLMEGFYKDGDIRNALVIWARVLRNGLEPDIISYNIT 345
Query: 478 LKHL 481
LK L
Sbjct: 346 LKGL 349
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 91/209 (43%)
Query: 282 YEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+E+ + + + R VS +NI+++ + + + M++ ++TY ++
Sbjct: 45 FELWEMMGNEGNRSVSSFNIMMRGLFDKGKVDEVISIWELMKKSDFVEDSITYGILVHGF 104
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
CKNG + +LE + DA Y I C+ D A + N M+K G +P
Sbjct: 105 CKNGYINKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNDMIKSGCKPNA 164
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
+ I G ++EDA + S + + Y+ L + KN A +++ E
Sbjct: 165 HVYNTLINGLVGASKFEDAIRVFREMGTVRCSPTIITYNTLINGLCKNEMFGEAYDLVKE 224
Query: 462 MMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
M++ GL P+V Y ++K L H+ A
Sbjct: 225 MLEKGLNPSVITYSMLMKGLCLDHKVERA 253
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 90/217 (41%), Gaps = 5/217 (2%)
Query: 274 EMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLT 333
E+ S+ L + + +V E ++Y IL+ C+ +L Q G
Sbjct: 77 EVISIWELMKKSDFV----EDSITY-GILVHGFCKNGYINKSLHVLEMAEQKGGVLDAFA 131
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
Y+ ++ LCK A +L +M+ C P+A Y I KF+ A F +M
Sbjct: 132 YSAMINGLCKEANLDKAVSVLNDMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMG 191
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPV 453
P + T+ I G + +AY V +K + S + YS+L ++
Sbjct: 192 TVRCSPTIITYNTLINGLCKNEMFGEAYDLVKEMLEKGLNPSVITYSMLMKGLCLDHKVE 251
Query: 454 MAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
A + ++++ G +P+V ++ ++ L + + +A
Sbjct: 252 RALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQLA 288
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 70/186 (37%), Gaps = 47/186 (25%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
VG S +R EM +V + + YN LI +C+ F DL+
Sbjct: 175 VGASKFEDAIRVFREMGTV------------RCSPTIITYNTLINGLCKNEMFGEAYDLV 222
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
EM + G P +TY+ ++ LC + + A +L +++ + PD + I I C V
Sbjct: 223 KEMLEKGLNPSVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSV 282
Query: 380 GKFDVAFNFFNQM-----------------------------------VKRGLQPRLATH 404
GK +A + + M ++ GL+P + ++
Sbjct: 283 GKTQLALSLYJDMNRWKCAPNLVTHNTLMEGFYKDGDIRNALVIWARVLRNGLEPDIISY 342
Query: 405 AAFIKG 410
+KG
Sbjct: 343 NITLKG 348
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 61/142 (42%), Gaps = 8/142 (5%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
G CL V +++++ + + K + V +NILI +C + L ++
Sbjct: 243 GLCLDHKVERALQLWN--------QVISKGFKPDVQMHNILIHGLCSVGKTQLALSLYJD 294
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M + C P +T+N ++ K+G +A + +L PD I+Y I + C +
Sbjct: 295 MNRWKCAPNLVTHNTLMEGFYKDGDIRNALVIWARVLRNGLEPDIISYNITLKGLCSCNR 354
Query: 382 FDVAFNFFNQMVKRGLQPRLAT 403
A F + V++ + P T
Sbjct: 355 ICDAILFLHDAVRKKIVPTKIT 376
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 9/215 (4%)
Query: 269 VRALIEMFSVLGLYEMAKYV-IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGC 327
+R + + V +EM + + +K E V YNIL++ + + ++ L+ +M C
Sbjct: 266 IRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 325
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
+P +TY+ ++ LC++G+ +A LL+ M + PDA +Y+ I CR G+ DVA
Sbjct: 326 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 385
Query: 388 FFNQMVKRGLQPRLATH----AAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
F M+ G P + + A K E K + SS N ++S L
Sbjct: 386 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 445
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
S DK + A +++ EM+ NG+ P+ Y ++
Sbjct: 446 SSGDK----IRALHMILEMVSNGIDPDEITYNSMI 476
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 99/228 (43%), Gaps = 6/228 (2%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEM 306
RV+E+L + G V ALI F + + A V+ + K YNI+I +
Sbjct: 141 RVMEILEKFGQPD-VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSL 199
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
C R +L ++ C+P +TY ++ G +A +LL+EML R PD
Sbjct: 200 CSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDM 259
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
TY I C+ G D AF + +G +P + ++ ++ ++E+ K +
Sbjct: 260 FTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTK 319
Query: 427 SADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + + YS+L + ++ A N+L M + GL P+ Y
Sbjct: 320 MFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSY 367
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 87/187 (46%), Gaps = 2/187 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I+ MC+ +++ + GCEP ++YN +L L G+ + +L+ +M
Sbjct: 262 YNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMF 321
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C P+ +TY I I CR GK + A N M ++GL P ++ I + R +
Sbjct: 322 SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD 381
Query: 419 DAYKYV-VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
A +++ + +D ++LA+L KN A + ++ + G PN S Y +
Sbjct: 382 VAIEFLETMISDGCLPDIVNYNTVLATLC-KNGKADQALEIFGKLGEVGCSPNSSSYNTM 440
Query: 478 LKHLHTS 484
L +S
Sbjct: 441 FSALWSS 447
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 92/233 (39%), Gaps = 35/233 (15%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
M K +K + V Y+ILI +CR + +LL M++ G P +Y+ ++ C+
Sbjct: 317 MTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCR 376
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN------------- 390
G+ A E LE M+ C PD + Y + C+ GK D A F
Sbjct: 377 EGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSS 436
Query: 391 ----------------------QMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSA 428
+MV G+ P T+ + I + A++ +V
Sbjct: 437 YNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMR 496
Query: 429 DKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
S + Y+++ K + A +VL M+ NG RPN + Y +++ +
Sbjct: 497 SCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGI 549
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 1/123 (0%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
S YN + + D +++EM G +P +TYN ++ LC+ G A ELL +
Sbjct: 435 SSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVD 494
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY-FIFY 415
M HP +TY I ++ C+ + + A + + MV G +P T+ I+G F Y
Sbjct: 495 MRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGY 554
Query: 416 RYE 418
R E
Sbjct: 555 RAE 557
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 75/186 (40%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y ILI+ LL EM G +P TYN ++ +CK G A E++
Sbjct: 224 VITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIR 283
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ + C PD I+Y I + GK++ +M P + T++ I
Sbjct: 284 NLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDG 343
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ E+A + L +K + Y L + + +A L M+ +G P++ Y
Sbjct: 344 KIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYN 403
Query: 476 RVLKHL 481
VL L
Sbjct: 404 TVLATL 409
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 88/186 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ +I +C+ ++L M + G P +TYN +L C +GQ +A L+
Sbjct: 236 VVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLK 295
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M P+ +TY + Y C+ G+ A F+ M KRGL+P +AT+ ++GY
Sbjct: 296 KMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKG 355
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ + + L + ++++L + K A V S+M ++GL PNV Y
Sbjct: 356 ALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYG 415
Query: 476 RVLKHL 481
V+ L
Sbjct: 416 TVIDVL 421
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 81/188 (43%), Gaps = 3/188 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEM---RQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
YN L+K +C + +LL M R G P ++YN VL K G A
Sbjct: 166 YNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYH 225
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EML R PD +TY I C+ D A N MVK G+ P T+ + + GY
Sbjct: 226 EMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSG 285
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ ++A + + + YS L + KN A+ + M K GL P+++ YR
Sbjct: 286 QPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYR 345
Query: 476 RVLKHLHT 483
+L+ T
Sbjct: 346 TLLQGYAT 353
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 60/128 (46%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++N +I C+ L M ++G +P +TYN ++ C G+ +A +LL M
Sbjct: 483 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASM 542
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
+ PD +TY I CRV + D A F +MV G+ P + T+ ++G F R
Sbjct: 543 VSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRT 602
Query: 418 EDAYKYVV 425
A + V
Sbjct: 603 AAAKELYV 610
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 78/183 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI +C + +L++EM G T+ +N ++ CK G+ ++ +L + M+
Sbjct: 449 YTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMV 508
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD ITY I C GK D A MV G++P + T+ I GY R +
Sbjct: 509 RIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMD 568
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA S + + Y+++ AK + + K+G + +S Y +L
Sbjct: 569 DALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIIL 628
Query: 479 KHL 481
L
Sbjct: 629 HGL 631
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 104/258 (40%), Gaps = 40/258 (15%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPI 330
AL+EM ++L L M + I+ +NILI ++ + +MRQ G P
Sbjct: 356 ALVEMHALLDL--MVRNGIQPDHH---VFNILICAYAKQEKVDQAMLVFSKMRQHGLNPN 410
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA----- 385
+ Y V+ VLCK+G DA E+M+ P+ I Y I C K+D A
Sbjct: 411 VVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELIL 470
Query: 386 -------------FN-----------------FFNQMVKRGLQPRLATHAAFIKGYFIFY 415
FN F+ MV+ G++P + T+ I G +
Sbjct: 471 EMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAG 530
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ ++A K + + Y L + + + + A + EM+ +G+ PN+ Y
Sbjct: 531 KMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYN 590
Query: 476 RVLKHLHTSHQEHMAKCL 493
+L+ L + + AK L
Sbjct: 591 IILQGLFHTRRTAAAKEL 608
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 85/216 (39%), Gaps = 39/216 (18%)
Query: 279 LGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE-MRQVGCEPITLTYNYV 337
LG + V K + L+K +C D+++ M ++GC P +YN +
Sbjct: 110 LGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNL 169
Query: 338 LGVLCKNGQDADACELLEEML---GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
L LC + +A ELL M G PD ++Y + + G D A++ +++M+
Sbjct: 170 LKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLD 229
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM 454
RG+ P + T+++ I A DK
Sbjct: 230 RGILPDVVTYSSIIAAL-----------------------------CKAQAMDK------ 254
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
A VL+ M+KNG+ P+ Y +L +S Q A
Sbjct: 255 AMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEA 290
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 80/209 (38%), Gaps = 45/209 (21%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++ C K L +MR G EP +TY+ ++ LCKNG+ +A ++ + M
Sbjct: 274 YNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMT 333
Query: 359 GRNCHPDAITYE-----------------------------------IFIVYSCRVGKFD 383
R PD TY I I + K D
Sbjct: 334 KRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVD 393
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
A F++M + GL P + + I +DA Y D+ + + ++Y+ L
Sbjct: 394 QAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSL- 452
Query: 444 SLH-----DKNNNPVMAKNVLSEMMKNGL 467
+H DK + A+ ++ EM+ G+
Sbjct: 453 -IHGLCTCDKWDK---AEELILEMLDRGI 477
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 4/119 (3%)
Query: 364 PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY 423
P TY I I CR G+ D+ F +VK+G + T +KG R DA
Sbjct: 90 PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149
Query: 424 VVLSADKYKSSSNMLY--SLLASLHDKNNNPVMAK--NVLSEMMKNGLRPNVSVYRRVL 478
V+ + ++ +LL L D+N + + +++++ G P+V Y VL
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVL 208
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 62/141 (43%), Gaps = 2/141 (1%)
Query: 265 LVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQ 324
L++G + M L L++ + V + YNI+++ + ++L V + +
Sbjct: 557 LINGYCRVSRMDDALALFK--EMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITK 614
Query: 325 VGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
G + TYN +L LCKN +A + + + + + T+ I I + G+ D
Sbjct: 615 SGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDE 674
Query: 385 AFNFFNQMVKRGLQPRLATHA 405
A + F GL P + T++
Sbjct: 675 AKDLFAAHSANGLVPDVRTYS 695
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 81/180 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN++I +CR K ++L EM G P +TYN +L CK G A + EM+
Sbjct: 83 YNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMV 142
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P +TY I C+ + A FF+QM RGL+P T+ I G+
Sbjct: 143 RNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLN 202
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+AY+ + + S S + Y+ H A V+ EM++ GL P+V Y ++
Sbjct: 203 EAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTII 262
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 82/183 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ C+ +F + EM + G P +TY ++ +CK A E ++M
Sbjct: 118 YNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMR 177
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R P+ TY I R G + A+ N+M + G P + T+ AFI G+ + R E
Sbjct: 178 IRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERME 237
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A V +K + + YS + S + A + EM++ G+ P+ Y ++
Sbjct: 238 EALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLI 297
Query: 479 KHL 481
+ L
Sbjct: 298 QGL 300
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 6/186 (3%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YNILI+ C + + EM + GC P +TYN ++ CK G+ +A LL+
Sbjct: 10 VYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLK 69
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M + P+ I+Y + I CR G A+ +M +G P T+ + GY
Sbjct: 70 SMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGY---C 126
Query: 416 RYEDAYKYVVLSADKYK---SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
+ + ++ +V+ A+ + S S + Y+ L + K N A +M GLRPN
Sbjct: 127 KEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNER 186
Query: 473 VYRRVL 478
Y ++
Sbjct: 187 TYTTLI 192
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 89/216 (41%), Gaps = 6/216 (2%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI F +G + + ER V YN LI C+ LL M G
Sbjct: 16 LIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKG 75
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
+P ++YN ++ LC+ G +A E+LEEM + PD +TY + C+ G F A
Sbjct: 76 MQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQAL 135
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
+MV+ G+ P + T+ A I A ++ + + Y+ L
Sbjct: 136 VIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGF 195
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLH 482
+ A +L+EM ++G P+V Y + H H
Sbjct: 196 SRQGLLNEAYRILNEMTESGFSPSVVTYNAFI-HGH 230
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 6/187 (3%)
Query: 229 NEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYV 288
NE+ + L S + L + +R++ + + G S V A I VL E A V
Sbjct: 184 NERTYTTLIDGFSRQGLLNEA-YRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGV 242
Query: 289 IKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
+++ K V Y+ +I CR+ + + EM + G P +TY+ ++ LC+
Sbjct: 243 VQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCE 302
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
+ +AC+L +EML PD TY I C G + A + ++M+ +G P T
Sbjct: 303 MRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVT 362
Query: 404 HAAFIKG 410
++ I G
Sbjct: 363 YSVLING 369
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 84/195 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI R+ +L EM + G P +TYN + C + +A +++EM+
Sbjct: 188 YTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMV 247
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD ++Y I CR G+ D AF +MV++G+ P T+++ I+G R
Sbjct: 248 EKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLT 307
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A D Y+ L + + + A ++ EM+ G P+ Y ++
Sbjct: 308 EACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLI 367
Query: 479 KHLHTSHQEHMAKCL 493
L+ + AK L
Sbjct: 368 NGLNKQARTREAKRL 382
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 70/153 (45%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P TYN ++ C G+ EM C P+ +TY I C++G+ D AF
Sbjct: 8 PNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL 67
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
M +G+QP L ++ I G ++A++ + K + + Y+ L + + K
Sbjct: 68 LKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCK 127
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
N A + +EM++NG+ P+V Y ++ +
Sbjct: 128 EGNFHQALVIHAEMVRNGVSPSVVTYTALINSM 160
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 30/72 (41%)
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
C G +A + E M+ RN P Y + I CR G AFN + +M+ G P
Sbjct: 420 FCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPH 479
Query: 401 LATHAAFIKGYF 412
T IK F
Sbjct: 480 TVTVITLIKALF 491
>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
Length = 796
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 85/183 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V+ N LI +C+ + K +L M G E +TYN ++ CK + +A +L +
Sbjct: 457 VATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRD 516
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M+ R PD T+ IF+ C +GK + + +QM GL+P + T+ I GY
Sbjct: 517 DMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAK 576
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
A +Y+ + ++Y+ L + +N N A +L M NG++P Y
Sbjct: 577 DMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYN 636
Query: 476 RVL 478
++
Sbjct: 637 SLM 639
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 8/180 (4%)
Query: 303 IKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNC 362
I+E+C+ + ++ ++ G T N ++ LC+ +A ++L+ M+
Sbjct: 429 IQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGV 488
Query: 363 HPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
D ITY I I C+ K D A + M+KRG +P L T F+ Y + E+
Sbjct: 489 ELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILH 548
Query: 423 YVVLSADKYKSSS----NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ D+ KS + Y + + K + A L+E+MKNGLRPN +Y ++
Sbjct: 549 LL----DQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALI 604
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 97/235 (41%), Gaps = 7/235 (2%)
Query: 257 LNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVI------KKTERKVSYYNILIKEMCRRC 310
L+ G S + L+E G ++A+ V K V Y +IK +CR
Sbjct: 166 LSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMIKALCRAG 225
Query: 311 DFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYE 370
+ +L E+R+ G +P +TYN ++ LCK+G+ +A L M+ P +T+
Sbjct: 226 EIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFG 285
Query: 371 IFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADK 430
I I R +F +M G+ P + I + +A K K
Sbjct: 286 ILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSK 345
Query: 431 YKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK-HLHTS 484
+ + Y+L+A K A+ +L EM+ G+ + S++ V+ HL +
Sbjct: 346 GIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGT 400
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 77/180 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +I C+ D + L E+ + G P + YN ++G +NG +DA +L+ M
Sbjct: 565 YGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMK 624
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P +TY + + C G + F Q + + ++ + + I+G+ + +
Sbjct: 625 YNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKID 684
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A Y + + M Y+ L + K+ N A + EM+ G+ P+ Y ++
Sbjct: 685 EAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLI 744
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 55/126 (43%)
Query: 285 AKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKN 344
A+ ++K E V Y I+I+ C+ EM G P +TY ++ K+
Sbjct: 656 AQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKS 715
Query: 345 GQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
G +A +L +EM+ PD+++Y I C V D +M + L+ ++
Sbjct: 716 GNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSY 775
Query: 405 AAFIKG 410
AF+ G
Sbjct: 776 NAFVDG 781
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 4/193 (2%)
Query: 283 EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLC 342
EM IK+T V YN++ K +C+ + + +L EM G +N V+
Sbjct: 341 EMVSKGIKQT---VVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHL 397
Query: 343 KNGQDAD-ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
+ D L+ EML R P+ I C+ GK + A + Q++ +GL +
Sbjct: 398 RGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNV 457
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
AT A I G ++A K + + + Y+++ K + A + +
Sbjct: 458 ATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDD 517
Query: 462 MMKNGLRPNVSVY 474
M+K G +P++ +
Sbjct: 518 MIKRGFKPDLFTF 530
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 48/113 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ MC + + + + E + Y ++ CK G+ +A +EM
Sbjct: 635 YNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMH 694
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
R P+ +TY + + G + A F++MV G+ P ++ I G+
Sbjct: 695 SRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGF 747
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 87/199 (43%)
Query: 280 GLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
G + +K E + YN++I +CR K +L EM + G +TYN ++
Sbjct: 259 GFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIK 318
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
CK G A + EML P ITY I C+ G + A F +QM RGL P
Sbjct: 319 GYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCP 378
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
T+ + G+ +AY+ + D S S + Y+ L + H V A VL
Sbjct: 379 NERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVL 438
Query: 460 SEMMKNGLRPNVSVYRRVL 478
+M + GL P+V Y VL
Sbjct: 439 EDMKEKGLTPDVVSYSTVL 457
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 6/200 (3%)
Query: 216 QLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEM 275
+ L+ V +C NE+ + L S K + +RV++ + G S V ALI
Sbjct: 366 EFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA-YRVLKEMIDNGFSPSVVTYNALING 424
Query: 276 FSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPI 330
+ G A V++ + K V Y+ ++ CR D + +M G +P
Sbjct: 425 HCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPD 484
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN 390
T+TY+ ++ C+ + +AC+L +EML PD TY I C G A N
Sbjct: 485 TITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHN 544
Query: 391 QMVKRGLQPRLATHAAFIKG 410
+MV++G+ P + T++ I G
Sbjct: 545 EMVEKGVLPDVVTYSVLING 564
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 83/181 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LIK C+ +F + EM + G P +TY ++ +CK G A E L++M
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMR 372
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R P+ TY + + G + A+ +M+ G P + T+ A I G+ I +
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMV 432
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA + +K + + YS + S ++ + A V +M+ G++P+ Y ++
Sbjct: 433 DAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLI 492
Query: 479 K 479
+
Sbjct: 493 Q 493
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 12/182 (6%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
+L EM G P +TYN ++ C G+ DA +LE+M + PD ++Y + C
Sbjct: 402 VLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFC 461
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY------VVLSADKY 431
R D A +MV +G++P T+++ I+G+ R ++A V L D++
Sbjct: 462 RSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEF 521
Query: 432 KSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
Y+ L + + + A + +EM++ G+ P+V Y ++ L+ + AK
Sbjct: 522 T------YTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAK 575
Query: 492 CL 493
L
Sbjct: 576 RL 577
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 74/179 (41%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y LI MC+ + + L +MR G P TY ++ + G +A +L+
Sbjct: 345 VITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLK 404
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM+ P +TY I C GK A M ++GL P + +++ + G+ Y
Sbjct: 405 EMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSY 464
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
++A + K + YS L + A ++ EM++ GL P+ Y
Sbjct: 465 DVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTY 523
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 78/190 (41%), Gaps = 15/190 (7%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL---------------GV 340
V Y++LI + ++ + + LL+++ P +TY+ ++
Sbjct: 555 VVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKG 614
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
C G +A ++ E ML +N PD Y + I CR G A++ + +MVK G
Sbjct: 615 FCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLH 674
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
T A +K + + + + S +L ++ + N + +VL+
Sbjct: 675 TVTVIALVKTLHKEGKVNELNSVIANVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLA 734
Query: 461 EMMKNGLRPN 470
EM K+G PN
Sbjct: 735 EMAKDGFLPN 744
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 4/201 (1%)
Query: 285 AKYVIKKTER----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
A V++ ER V YN LI + + +L M+ G P +TYN ++G
Sbjct: 123 ATRVMEILERYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGS 182
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
C G+ A E+ EE+L NC P ITY I I + G DVA ++M+ +GL+P
Sbjct: 183 FCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPD 242
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
T+ A I+G + A++ + + + + Y++L + ++S
Sbjct: 243 TLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLIS 302
Query: 461 EMMKNGLRPNVSVYRRVLKHL 481
EM+ G +PNV + ++ L
Sbjct: 303 EMISIGCKPNVVTHSILIGTL 323
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 10/206 (4%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K E YN +I+ MC+ +LL + GC+P +TYN +L L G+ ++
Sbjct: 237 KGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSE 296
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
+L+ EM+ C P+ +T+ I I CR GK + A N M ++GL+P + I
Sbjct: 297 GEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIA 356
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNML-----YSLLASLHDKNNNPVMAKNVLSEMMK 464
G+ R + A +++ +Y S L Y+ + + + A V ++ +
Sbjct: 357 GFCREGRLDLATEFL-----EYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDE 411
Query: 465 NGLRPNVSVYRRVLKHLHTSHQEHMA 490
G PNVS Y + L +S + A
Sbjct: 412 VGCPPNVSSYNTLFSALWSSGDRYRA 437
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 10/185 (5%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNIL++ + R + L+ EM +GC+P +T++ ++G LC++G+ +A LL M
Sbjct: 281 YNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMK 340
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PDA Y+ I CR G+ D+A F M+ G P + + + G + +
Sbjct: 341 EKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKAD 400
Query: 419 DAYKYVVLSADKYK-----SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
A + V D+ SS N L+S L S D+ A ++ +++ G+ P+
Sbjct: 401 QALE-VFEKLDEVGCPPNVSSYNTLFSALWSSGDR----YRALEMILKLLNQGIDPDEIT 455
Query: 474 YRRVL 478
Y ++
Sbjct: 456 YNSLI 460
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 105/269 (39%), Gaps = 22/269 (8%)
Query: 222 NVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGL 281
N +V K+ GFLP +++ + +G C + +E+F
Sbjct: 156 NANRVLDRMKSRGFLPDVVTYNIM--------------IGSFCSRGKLDLALEIFE---- 197
Query: 282 YEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
E+ K E V Y ILI+ LL EM G EP TLTYN ++ +
Sbjct: 198 -ELLK---DNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGM 253
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
CK A ELL + R C PD ITY I + GK+ ++M+ G +P +
Sbjct: 254 CKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNV 313
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
TH+ I + E+A + +K Y L + + +A L
Sbjct: 314 VTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEY 373
Query: 462 MMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
M+ +G P++ Y ++ L + + A
Sbjct: 374 MISDGCLPDIVNYNTIMAGLCRTGKADQA 402
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 59/115 (51%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
VS YN L + D ++++++ G +P +TYN ++ LC++G +A ELL
Sbjct: 418 VSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLV 477
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+M P+ ++Y I ++ C+V + + A M ++G QP T+ I+G
Sbjct: 478 DMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEG 532
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 61/144 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++ +CR ++ ++ +VGC P +YN + L +G A E++ ++L
Sbjct: 386 YNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLL 445
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD ITY I CR G D A M +P + ++ + G R
Sbjct: 446 NQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRAN 505
Query: 419 DAYKYVVLSADKYKSSSNMLYSLL 442
DA + + +K + Y LL
Sbjct: 506 DAIEVLAAMTEKGCQPNETTYILL 529
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 1/99 (1%)
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
SCR GK++ + F MV +G P + IKG+F A + V+ ++Y
Sbjct: 79 SCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATR-VMEILERYGKPD 137
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
Y+ L S K N A VL M G P+V Y
Sbjct: 138 VFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTY 176
>gi|225465635|ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial [Vitis vinifera]
gi|296085293|emb|CBI29025.3| unnamed protein product [Vitis vinifera]
Length = 854
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 77/175 (44%), Gaps = 1/175 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI C+ D+L EM G P +TYN ++ CKNG A L
Sbjct: 632 VVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLS 691
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+G+ P+ ITY I C G+ D A + +N+M +G P + A I G
Sbjct: 692 RMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHG-LCKC 750
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
+ DA + ++ ++Y L + N NP +A +L EM+ G P+
Sbjct: 751 GWPDAALLYFREMGERETPDTIVYVALITSFISNKNPTLAFEILKEMVAKGKFPD 805
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 80/183 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N + +CRR D G D++ EMR G EP Y ++ LCK + A+AC L EM+
Sbjct: 530 HNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMV 589
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD + Y I ++ D A F + RG P + + I G+ R
Sbjct: 590 REGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVS 649
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A+ + K S + Y+LL KN + A + LS M+ PNV Y ++
Sbjct: 650 EAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLI 709
Query: 479 KHL 481
L
Sbjct: 710 DGL 712
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 84/195 (43%), Gaps = 1/195 (0%)
Query: 277 SVLGLYEMAKYV-IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYN 335
V G +M + + + E + +Y +L+K++C+R + L EM + G P + Y+
Sbjct: 542 DVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYS 601
Query: 336 YVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR 395
+ K A E+ ++ R PD + Y I C+V + A + ++MV +
Sbjct: 602 AAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAK 661
Query: 396 GLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMA 455
GL P + T+ I G+ + A+ + K + + + Y+ L P A
Sbjct: 662 GLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDA 721
Query: 456 KNVLSEMMKNGLRPN 470
++ +EM G PN
Sbjct: 722 IHLWNEMRGKGCSPN 736
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 77/182 (42%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
++ V YN LI ++ + LL EM+ G P T+N + G LC+ A +
Sbjct: 489 KQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALD 548
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
++ EM P Y + + C+ + A NF +MV+ G P + ++A I G+
Sbjct: 549 MVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFV 608
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
+ A + + + Y+ L + K A ++L EM+ GL P+V
Sbjct: 609 KIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVV 668
Query: 473 VY 474
Y
Sbjct: 669 TY 670
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 89/237 (37%), Gaps = 53/237 (22%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEP-------------------------- 329
VS Y+ LI +C + + + LL EM+++G +P
Sbjct: 338 VSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLIAYCSEEVDIYRLIEERL 397
Query: 330 -------ITLTYNYVLGVLCKNGQDAD-ACELLEEMLGRN----------------CHPD 365
+ L YN VL L NG+ D A LL M G N PD
Sbjct: 398 EDLDTEAMLLLYNSVLNGLV-NGKSVDKAYYLLRAMTGDNYTDNFEVNKFFMVKEMVRPD 456
Query: 366 AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV- 424
++ I I C GK D+A + F MV+ G + + + I R E+ Y +
Sbjct: 457 TTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLK 516
Query: 425 VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ ++ + S+ L + + A +++ EM +G P + Y ++K L
Sbjct: 517 EMKGSGFRPTQFTHNSIFGCLC-RREDVTGALDMVREMRVHGHEPWIKHYTLLVKQL 572
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 82/209 (39%), Gaps = 22/209 (10%)
Query: 319 LVEMR-----QVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFI 373
LVEMR G EP T VL C + + A + E+ GR D I +
Sbjct: 217 LVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRG-WVDGHVLSILV 275
Query: 374 VYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK-YVVLSADKYK 432
+ + G+ D AF +M G++ T I G+ R + A + + + +
Sbjct: 276 LTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFA 335
Query: 433 SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN--------------VSVYRRVL 478
++ +L+ L K A ++LSEM + G+ P+ V +YR +
Sbjct: 336 PDVSVYDALIGGLCAKKEIE-KALHLLSEMKELGIDPDIQILSKLIAYCSEEVDIYRLIE 394
Query: 479 KHLHTSHQEHMAKCLSSRYSSLSLGSSVE 507
+ L E M +S + L G SV+
Sbjct: 395 ERLEDLDTEAMLLLYNSVLNGLVNGKSVD 423
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ILI CRR L EM +G +P YN ++ CK G + A L+ EM+
Sbjct: 405 YSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMI 464
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P +TY + C GK + A +++M +G+ P + T + G F
Sbjct: 465 NKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIR 524
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA K A+ + + Y+++ + + N A L+EM++ G+ P+ YR ++
Sbjct: 525 DAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLI 584
Query: 479 KHLHTSHQEHMAK 491
L + Q AK
Sbjct: 585 HGLCLTGQASEAK 597
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 85/179 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y +I+ +C D ++++V+M GC+ + YN ++ LCK + +A + +
Sbjct: 227 VYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKK 286
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
++ G+ PD +TY + C+V +F+V ++M++ P A ++ ++G
Sbjct: 287 DLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRG 346
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ E+A V A+ S + +Y+ L K N A+ + M K GL PN Y
Sbjct: 347 KVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTY 405
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 100/230 (43%), Gaps = 10/230 (4%)
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDF 312
VV V G C V +EM EM + +E VS L++ + +R
Sbjct: 297 VVTYCTLVCGLCKVQEFEVGLEMID-----EMLRLRFSPSEAAVSS---LVEGLRKRGKV 348
Query: 313 KGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGR-NCHPDAITYEI 371
+ +L+ + + G P YN ++ LCK G++ D ELL + +G+ P+ +TY I
Sbjct: 349 EEALNLVKRVAEFGVSPNIFVYNALIDSLCK-GRNFDEAELLFDRMGKIGLCPNDVTYSI 407
Query: 372 FIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKY 431
I CR GK D A +F +M+ GL+P + + + I G+ F A + +K
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKK 467
Query: 432 KSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + Y+ L + A + EM G+ P++ + +L L
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGL 517
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 103/246 (41%), Gaps = 29/246 (11%)
Query: 180 FLKYMREIMPEFYKNSDIC-SLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPV 238
FL ++E+ K D+ + +ID + D++ F ++ + +NE G +P
Sbjct: 666 FLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEA------FGIWDLMINE---GCVPN 716
Query: 239 LISSKA----LTKKGIWRVVEVL-----------NQVGGSCLVSGV-RALIEMFSVLGLY 282
++ A L K G E+L NQV C + + + + +M +
Sbjct: 717 EVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAV--- 773
Query: 283 EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLC 342
E+ ++K + YN+LI+ CR+ + +L+ M G P +TY ++ LC
Sbjct: 774 ELHNAILKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELC 833
Query: 343 KNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLA 402
+ A EL M + PD + Y I C G+ A N+M+++GL+P
Sbjct: 834 RRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTE 893
Query: 403 THAAFI 408
T I
Sbjct: 894 TSETTI 899
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
MA+ + KK E V Y L+ C + L EM G P T+ +L L +
Sbjct: 460 MAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFR 519
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
G DA +L EM N P+ +TY + I C G AF F N+M+++G+ P +
Sbjct: 520 AGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYS 579
Query: 404 HAAFIKGYFIFYRYEDAYKYV 424
+ I G + + +A +V
Sbjct: 580 YRPLIHGLCLTGQASEAKVFV 600
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 112/256 (43%), Gaps = 15/256 (5%)
Query: 245 LTKKGIWRVVEVLNQVGGSCLVSG-VRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILI 303
+T KGI + + +G +R +++F+ EMA++ +K +V+Y N++I
Sbjct: 498 MTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFT-----EMAEWNVKPN--RVTY-NVMI 549
Query: 304 KEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH 363
+ C + + L EM + G P T +Y ++ LC GQ ++A ++ + NC
Sbjct: 550 EGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCE 609
Query: 364 PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY 423
+ I Y + CR GK + A + M RG+ L + I G +++D +
Sbjct: 610 LNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSL---KHKDRKVF 666
Query: 424 VVL---SADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKH 480
+ L D+ +++Y+ + K + A + M+ G PN Y V+
Sbjct: 667 LGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVING 726
Query: 481 LHTSHQEHMAKCLSSR 496
L + + A+ L S+
Sbjct: 727 LCKAGFVNEAEILCSK 742
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 2/181 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +I + DFK + M GC P +TY V+ LCK G +A L +M
Sbjct: 685 YTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMR 744
Query: 359 GRNCHPDAITYEIFI-VYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
N P+ +TY F+ + + VG A N ++K GL AT+ I+G+ R
Sbjct: 745 PGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILK-GLLANTATYNMLIRGFCRQGRM 803
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
E+A + + S + Y+ + S + N+ A + + M + G+RP+ Y +
Sbjct: 804 EEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTL 863
Query: 478 L 478
+
Sbjct: 864 I 864
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%)
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN 390
T TYN ++ C+ G+ +A EL+ M+G PD ITY I CR A +N
Sbjct: 787 TATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWN 846
Query: 391 QMVKRGLQPRLATHAAFIKG 410
M ++G++P + I G
Sbjct: 847 SMTEKGIRPDRVAYNTLIHG 866
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 85/189 (44%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K+ + V Y L+ +C+ +F+ +++ EM ++ P + ++ L K G+ +
Sbjct: 291 KELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEE 350
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A L++ + P+ Y I C+ FD A F++M K GL P T++ I
Sbjct: 351 ALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILID 410
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
+ + + A ++ D S Y+ L + H K + A+++++EM+ L P
Sbjct: 411 MFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEP 470
Query: 470 NVSVYRRVL 478
V Y ++
Sbjct: 471 TVVTYTSLM 479
>gi|218197339|gb|EEC79766.1| hypothetical protein OsI_21159 [Oryza sativa Indica Group]
Length = 410
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 85/183 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI E CR +F+ R L EM G ++YN ++ LC++G+ DA +LL+ M
Sbjct: 111 YNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMR 170
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P IT+ + + + GK A FFNQM G QP T+ I G+
Sbjct: 171 TEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMT 230
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + + ++ + + Y++L + N+ A +L+ M K GL + Y ++
Sbjct: 231 RANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLV 290
Query: 479 KHL 481
+ L
Sbjct: 291 RAL 293
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 126/324 (38%), Gaps = 41/324 (12%)
Query: 198 CSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVL 257
C+ +++ C + D R++ ++ + + NE + L + +KG + + E +
Sbjct: 41 CTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKG-FALFEEM 99
Query: 258 NQVGGSCLVSGVRALIEMFSVLGLYEMAKYV-----IKKTERKVSYYNILIKEMCRRCDF 312
+ G + LI + G +E A+ + ++ R V YN LI +CR
Sbjct: 100 RRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKL 159
Query: 313 ------------KGPR------DLLVE-----------------MRQVGCEPITLTYNYV 337
+G R +LLV+ M+ G +P +TYN +
Sbjct: 160 WDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNML 219
Query: 338 LGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
+ C+ A L +M R P +TY I I R AF M K GL
Sbjct: 220 IAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGL 279
Query: 398 QPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKN 457
+ T+ ++ + +DA K +K SN++Y ++ + + + A
Sbjct: 280 EVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALK 339
Query: 458 VLSEMMKNGLRPNVSVYRRVLKHL 481
++ EM + GL PN + Y ++ L
Sbjct: 340 LIMEMRQKGLIPNSASYGLTIRVL 363
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 48/100 (48%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +L++ +C + K R L M + G EP + Y+ ++ + G A +L+ EM
Sbjct: 286 YGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMR 345
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
+ P++ +Y + I C+ K A + MV+ GLQ
Sbjct: 346 QKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMVRAGLQ 385
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 5/207 (2%)
Query: 280 GLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
G + A + K+ E K V YN L++ +C+ + LL +M P +T+
Sbjct: 242 GCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITF 301
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N +L V K G+ +A EL +EM+ R P+ ITY + C + A N + MV+
Sbjct: 302 NVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR 361
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM 454
P + T + IKGY + R +D K + + ++ + YS+L ++ +
Sbjct: 362 NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKL 421
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A+ + EM+ +G+ P+V Y +L L
Sbjct: 422 AEELFQEMVSHGVLPDVMTYGILLDGL 448
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 5/203 (2%)
Query: 276 FSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYN 335
+SVLG Y E + +N LIK + L+ M + GC+P +TYN
Sbjct: 143 YSVLGKVMKLGY-----EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYN 197
Query: 336 YVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR 395
++ +C++G + A +LL +M RN D TY I CR G D A + F +M +
Sbjct: 198 SIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK 257
Query: 396 GLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMA 455
G++ + T+ + ++G ++ D + + + + +++L + K A
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317
Query: 456 KNVLSEMMKNGLRPNVSVYRRVL 478
+ EM+ G+ PN+ Y ++
Sbjct: 318 NELYKEMITRGISPNIITYNTLM 340
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 94/216 (43%), Gaps = 5/216 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+IL++ C+ K +L EM G P +TY +L LC NG+ A E+ E++
Sbjct: 406 YSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 465
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ Y I C+ GK + A+N F + +G++P + T+ I G
Sbjct: 466 KSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLS 525
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + + + ++ Y+ L H ++ + + ++ EM G + S + V+
Sbjct: 526 EANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 585
Query: 479 KHLHTSHQEHMAK-CLS----SRYSSLSLGSSVEAR 509
L ++ + + CLS SR L L S + R
Sbjct: 586 DMLLSAMKRLTLRYCLSKGSKSRQDLLELSGSEKIR 621
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 1/161 (0%)
Query: 332 LTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQ 391
+TY+ ++ C++G+ A EL +EM+ PD +TY I + C GK + A F
Sbjct: 404 VTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFED 463
Query: 392 MVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNN 451
+ K + + + I+G + EDA+ K + M Y+++ S K +
Sbjct: 464 LQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGS 523
Query: 452 PVMAKNVLSEMMKNGLRPNVSVYRRVLK-HLHTSHQEHMAK 491
A +L +M ++G PN Y +++ HL AK
Sbjct: 524 LSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAK 564
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/117 (20%), Positives = 50/117 (42%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y IL+ +C + ++ ++++ + + Y ++ +CK G+ DA L
Sbjct: 438 VMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFC 497
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+ + P+ +TY + I C+ G A +M + G P T+ I+ +
Sbjct: 498 SLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 554
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 43/102 (42%)
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
K + + Y +I+ MC+ + +L + G +P +TY ++ LCK G ++A
Sbjct: 468 KMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 527
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
LL +M P+ TY I R G + +M
Sbjct: 528 NILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569
>gi|224130680|ref|XP_002320901.1| predicted protein [Populus trichocarpa]
gi|222861674|gb|EEE99216.1| predicted protein [Populus trichocarpa]
Length = 475
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 62/122 (50%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ +CR+ + LL M+ GC P + YN V+ C+ G+ DAC++LE+M
Sbjct: 279 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIIHYNTVILGFCREGRAMDACKVLEDME 338
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C P+ ++Y + C G FD A + +M+ +G P A A IKG+ + E
Sbjct: 339 SNGCMPNLVSYRTLVGGLCDQGMFDEAKSHLEEMMMKGFSPHFAVSNALIKGFCNVGKIE 398
Query: 419 DA 420
+A
Sbjct: 399 EA 400
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 82/183 (44%), Gaps = 4/183 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNILI+ C L +M + P +Y ++ LC+ Q A +LLE+ML
Sbjct: 209 YNILIRAFCLNGQISMAYSLFNQMFKRDVMPDVESYRILMQALCRKSQVNGAVDLLEDML 268
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PDA++Y + CR K A+ +M +G P + + I G+ R
Sbjct: 269 NKGYVPDALSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIIHYNTVILGFCREGRAM 328
Query: 419 DAYKYVVLSADKYKSSSNML--YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
DA K V+ + N++ +L+ L D+ AK+ L EMM G P+ +V
Sbjct: 329 DACK-VLEDMESNGCMPNLVSYRTLVGGLCDQGMFD-EAKSHLEEMMMKGFSPHFAVSNA 386
Query: 477 VLK 479
++K
Sbjct: 387 LIK 389
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 70/165 (42%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
DL + P T +YN ++ C NGQ + A L +M R+ PD +Y I +
Sbjct: 192 DLFKDAHTYDVFPNTKSYNILIRAFCLNGQISMAYSLFNQMFKRDVMPDVESYRILMQAL 251
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
CR + + A + M+ +G P ++ + + +AYK + K +
Sbjct: 252 CRKSQVNGAVDLLEDMLNKGYVPDALSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 311
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ Y+ + + + A VL +M NG PN+ YR ++ L
Sbjct: 312 IHYNTVILGFCREGRAMDACKVLEDMESNGCMPNLVSYRTLVGGL 356
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 81/189 (42%), Gaps = 35/189 (18%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
++ + V Y++LI + R + E+++ G P TYN ++ CK G
Sbjct: 594 RRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDK 653
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A +LLEEM + +PD +TY I I C+ G+ + A N F+ + RGL P T+AA +
Sbjct: 654 ASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVD 713
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
GY K+ NP A +L EM+ G+ P
Sbjct: 714 GYC-----------------------------------KSKNPTAAFQLLEEMLLRGVPP 738
Query: 470 NVSVYRRVL 478
+ +Y +L
Sbjct: 739 DAFIYNVIL 747
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 115/295 (38%), Gaps = 32/295 (10%)
Query: 208 LDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTK---KG-----IWRVVEVL-- 257
+D Y M L+ NV+ L K F F P L+S +L KG W+V + +
Sbjct: 152 MDSYRKMGFLVEAVNVF---LGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCA 208
Query: 258 -----------NQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEM 306
N + C V V+ + L EM + K + YN++I +
Sbjct: 209 HKVLPDVYTYTNMISAHCKVGNVKDAKRV-----LLEMGE---KGCSPNLVTYNVIIGGL 260
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
CR +L M G P TY+ ++ C + +A +L EM+ P+
Sbjct: 261 CRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEP 320
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
ITY I R G + AF ++MV G++ L + G + E A + +
Sbjct: 321 ITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQE 380
Query: 427 SADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+K + YSLL H + N A +L EM K L P V Y ++ L
Sbjct: 381 MMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGL 435
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 90/196 (45%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
M + + K E Y++LI+ CR + +LL EM++ P LTY+ ++ LC+
Sbjct: 378 MQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCR 437
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
G +L EM+ P+A+ Y + + G+ + + +M ++G+ P +
Sbjct: 438 CGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFC 497
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
+ + I G+ R E+A Y++ ++ + Y + K +A +EM+
Sbjct: 498 YNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEML 557
Query: 464 KNGLRPNVSVYRRVLK 479
G+ PNV +Y +++
Sbjct: 558 SCGVLPNVGIYTALIE 573
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ + + R +L MR+ G P YN ++ CK + +A L EML
Sbjct: 463 YTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEML 522
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R P+A TY FI + G+ ++A +FN+M+ G+ P + + A I+G+
Sbjct: 523 ERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVT 582
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A+ + YS+L +N A + SE+ + GL PN Y ++
Sbjct: 583 EAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLI 642
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 5/209 (2%)
Query: 271 ALIEMFSVLGLYEMA-----KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI+ F G E A + V E + +N L+ +C+ + +++ EM +
Sbjct: 325 ALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEK 384
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G EP + TY+ ++ C+ A A ELL+EM R P +TY + I CR G
Sbjct: 385 GVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGT 444
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
+MV GL+P + + + R E++ + ++ Y+ L
Sbjct: 445 NAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIG 504
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
K A+ L EM++ LRPN Y
Sbjct: 505 FCKAKRMEEARTYLMEMLERRLRPNAHTY 533
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 86/183 (46%), Gaps = 1/183 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+++ C+ F+ DL EM + G T+++N ++ CK+G+ +A LLEEM+
Sbjct: 743 YNVILNFCCKEEKFEKALDLFQEMLEKGFAS-TVSFNTLIEGYCKSGKLQEANHLLEEMI 801
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+ +TY I ++C+ G A + +M +R + P T+ + + GY
Sbjct: 802 EKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMS 861
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ K M Y ++ + + N + A + E++ G+ +V+ Y ++
Sbjct: 862 EVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALI 921
Query: 479 KHL 481
+ L
Sbjct: 922 QAL 924
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L EM G EP +TY ++ C+ G +AC+L +E+L + Y+ I C
Sbjct: 866 LFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALC 925
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ +F N++ + G + L T + +G+ I ++A + V+ S K+ SN
Sbjct: 926 KKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAE-VLRSMVKFGWVSNT 984
Query: 438 LYSLLASLHDKNNNPVMAK---NVLSEM 462
+ L L D N N ++ N+L +M
Sbjct: 985 --TSLGDLVDGNQNGANSEDSDNLLKQM 1010
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 63/154 (40%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
EM G P Y ++ CK G +A + +L R D TY + I R G
Sbjct: 555 EMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNG 614
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
K AF F+++ ++GL P T+ + I G + A + + K + + Y+
Sbjct: 615 KMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYN 674
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+L K AKN+ ++ GL PN Y
Sbjct: 675 ILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTY 708
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 5/207 (2%)
Query: 280 GLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
G + A + K+ E K V YN L++ +C+ + LL +M P +T+
Sbjct: 232 GCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITF 291
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N +L V K G+ +A EL +EM+ R P+ ITY + C + A N + MV+
Sbjct: 292 NVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR 351
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM 454
P + T + IKGY + R +D K + + ++ + YS+L ++ +
Sbjct: 352 NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKL 411
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A+ + EM+ +G+ P+V Y +L L
Sbjct: 412 AEELFQEMVSHGVLPDVMTYGILLDGL 438
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 5/203 (2%)
Query: 276 FSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYN 335
+SVLG Y E + +N LIK + L+ M + GC+P +TYN
Sbjct: 133 YSVLGKVMKLGY-----EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYN 187
Query: 336 YVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR 395
++ +C++G + A +LL +M RN D TY I CR G D A + F +M +
Sbjct: 188 SIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK 247
Query: 396 GLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMA 455
G++ + T+ + ++G ++ D + + + + +++L + K A
Sbjct: 248 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 307
Query: 456 KNVLSEMMKNGLRPNVSVYRRVL 478
+ EM+ G+ PN+ Y ++
Sbjct: 308 NELYKEMITRGISPNIITYNTLM 330
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 94/216 (43%), Gaps = 5/216 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+IL++ C+ K +L EM G P +TY +L LC NG+ A E+ E++
Sbjct: 396 YSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 455
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ Y I C+ GK + A+N F + +G++P + T+ I G
Sbjct: 456 KSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLS 515
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + + + ++ Y+ L H ++ + + ++ EM G + S + V+
Sbjct: 516 EANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 575
Query: 479 KHLHTSHQEHMAK-CLS----SRYSSLSLGSSVEAR 509
L ++ + + CLS SR L L S + R
Sbjct: 576 DMLLSAMKRLTLRYCLSKGSKSRQDLLELSGSEKIR 611
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 73/163 (44%), Gaps = 1/163 (0%)
Query: 332 LTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQ 391
+TY+ ++ C++G+ A EL +EM+ PD +TY I + C GK + A F
Sbjct: 394 VTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFED 453
Query: 392 MVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNN 451
+ K + + + I+G + EDA+ K + M Y+++ S K +
Sbjct: 454 LQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGS 513
Query: 452 PVMAKNVLSEMMKNGLRPNVSVYRRVLK-HLHTSHQEHMAKCL 493
A +L +M ++G PN Y +++ HL AK +
Sbjct: 514 LSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLI 556
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/117 (20%), Positives = 50/117 (42%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y IL+ +C + ++ ++++ + + Y ++ +CK G+ DA L
Sbjct: 428 VMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFC 487
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+ + P+ +TY + I C+ G A +M + G P T+ I+ +
Sbjct: 488 SLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 544
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 43/102 (42%)
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
K + + Y +I+ MC+ + +L + G +P +TY ++ LCK G ++A
Sbjct: 458 KMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 517
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
LL +M P+ TY I R G + +M
Sbjct: 518 NILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 559
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 104/235 (44%), Gaps = 5/235 (2%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEM 306
+V +++ + G C V LI + + + A Y+ ++ R+ Y+ LI +
Sbjct: 287 KVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGL 346
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
C + L EM G P +TY+ +L LCKN + A+A LL+ + G N PD
Sbjct: 347 CHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDV 406
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
Y I I CR G + A + F+ + RGLQP + TH I+G ++A K
Sbjct: 407 QVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFRE 466
Query: 427 SADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + Y+ + +NN A +L EM+ G +VS ++K L
Sbjct: 467 MDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKML 521
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 105/242 (43%), Gaps = 18/242 (7%)
Query: 258 NQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRD 317
N V L++G+ ++ L L+ ++ + K + YN LI +C C++K
Sbjct: 160 NVVTYGTLMNGLCKDRQLTEALNLF--SEMIAKGISPDIFTYNSLIHALCNLCEWKHVTT 217
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
LL EM + P ++ N V+ LCK G+ +A ++++ M+ PD +TY + C
Sbjct: 218 LLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHC 277
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ D A F+ MV+ G + ++ I GY R + A + + M
Sbjct: 278 LRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTM 337
Query: 438 LYSLL-------ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ--EH 488
YS L L D A + +EM+ G PN+ Y +L +L +H+ E
Sbjct: 338 TYSTLIHGLCHVGRLQD-------AIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEA 390
Query: 489 MA 490
MA
Sbjct: 391 MA 392
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 94/222 (42%), Gaps = 8/222 (3%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
V G C+V + +++F K V + + V Y L+ +C+ +L
Sbjct: 133 VRGLCVVGKIGEALDVFD--------KMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLF 184
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
EM G P TYN ++ LC + LL EM+ P+ ++ I + C+
Sbjct: 185 SEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKE 244
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
GK A + + M++ G++P + T+AA + G+ + ++A K + + + Y
Sbjct: 245 GKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSY 304
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ L + + K A + EM + L PN Y ++ L
Sbjct: 305 NTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGL 346
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 87/181 (48%), Gaps = 6/181 (3%)
Query: 301 ILIKEMCR--RCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
I+I C R DF +L ++ ++G +P T T+ ++ LC G+ +A ++ ++M+
Sbjct: 96 IVINSFCHLNRVDFA--LSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMV 153
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
G P+ +TY + C+ + A N F++M+ +G+ P + T+ + I ++
Sbjct: 154 GEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWK 213
Query: 419 DAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
++ K K N++ +++ K A +V+ M++ G+ P+V Y +
Sbjct: 214 HV-TTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAAL 272
Query: 478 L 478
+
Sbjct: 273 M 273
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 59/161 (36%), Gaps = 35/161 (21%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M G P T V+ C + A +L ++L PD T+ + C VG
Sbjct: 81 KMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVG 140
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
K A + F++MV G QP + T+ + G L D+ +
Sbjct: 141 KIGEALDVFDKMVGEGFQPNVVTYGTLMNG---------------LCKDRQLTE------ 179
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A N+ SEM+ G+ P++ Y ++ L
Sbjct: 180 --------------ALNLFSEMIAKGISPDIFTYNSLIHAL 206
>gi|357444525|ref|XP_003592540.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481588|gb|AES62791.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 507
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 152/356 (42%), Gaps = 10/356 (2%)
Query: 142 SGDSETESKLLSMSVSLSNASVIEILRVLNSEKVSALCFLKYMREIMPEFYKNSDICSLV 201
+ +S + L + V +S V+ +L L++ + AL F ++ E F N++I +
Sbjct: 68 TPESPVDVSLRNFPVEVSPELVVAVLNKLSNAGILALSFFRWA-EKQQGFNHNTEIFHAL 126
Query: 202 IDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVG 261
I+ G++ ++ + L+++ ++ LN F + + K+ + + E + + G
Sbjct: 127 IEALGKIRQFKMIWNLVDEMKQRKL-LNGDTFSLIARRYVRAKVIKEAL-KTFERMEKYG 184
Query: 262 GSCLVSGVRALIEMFSVLGLY-EMAKYVIKKT-----ERKVSYYNILIKEMCRRCDFKGP 315
+S LI++ + E A+ + K E + Y ILI+ ++ +
Sbjct: 185 LKPQISDFNKLIDVLCKSKFHVEKAQELFDKMRQWNLEPNLKSYTILIEGWSQQQNLLKV 244
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
++ EM+ G +P +TY ++ CK + +A + +ML +N +P Y FI
Sbjct: 245 DEVCREMKDDGFQPDVVTYGIIINAYCKAKKYDEAIGIYHDMLSKNVNPSPHIYCTFITG 304
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
+ D AF FF + G P T+ A + Y R +DAY+ V + +
Sbjct: 305 LGNGSRMDEAFEFFEKSKASGFPPEAPTYNAVVSAYCWSMRIDDAYRIVGEMKELGIGPN 364
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEM-MKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
Y ++ K A +V M + G P+VS Y +++ +Q MA
Sbjct: 365 ARTYDIILVHLIKGGRTKEAYSVFQRMSSETGCEPSVSTYAIMVRMFCNENQLDMA 420
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 65/149 (43%), Gaps = 2/149 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++ C ++ EM+++G P TY+ +L L K G+ +A + + M
Sbjct: 333 YNAVVSAYCWSMRIDDAYRIVGEMKELGIGPNARTYDIILVHLIKGGRTKEAYSVFQRMS 392
Query: 359 GRN-CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
C P TY I + C + D+A +N+M +G+ P + + I +
Sbjct: 393 SETGCEPSVSTYAIMVRMFCNENQLDMAMVVWNEMKDKGILPGIHMFSTLIISLCHENKL 452
Query: 418 EDAYKYVVLSAD-KYKSSSNMLYSLLASL 445
+DA +Y D + ++NM + +L
Sbjct: 453 DDACRYFQQMLDVGIRPTANMFSAFKRAL 481
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 5/207 (2%)
Query: 280 GLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
G + A + K+ E K V YN L++ +C+ + LL +M P +T+
Sbjct: 242 GCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITF 301
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N +L V K G+ +A EL +EM+ R P+ ITY + C + A N + MV+
Sbjct: 302 NVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR 361
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM 454
P + T + IKGY + R +D K + + ++ + YS+L ++ +
Sbjct: 362 NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKL 421
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A+ + EM+ +G+ P+V Y +L L
Sbjct: 422 AEELFQEMVSHGVLPDVMTYGILLDGL 448
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 82/190 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+IL++ C+ K +L EM G P +TY +L LC NG+ A E+ E++
Sbjct: 406 YSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 465
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ Y I C+ GK + A+N F + +G++P + T+ I G
Sbjct: 466 KSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLS 525
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + + + ++ Y+ L H ++ + + ++ EM G + S + V+
Sbjct: 526 EANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 585
Query: 479 KHLHTSHQEH 488
L + +
Sbjct: 586 DMLLSGELDK 595
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 1/161 (0%)
Query: 332 LTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQ 391
+TY+ ++ C++G+ A EL +EM+ PD +TY I + C GK + A F
Sbjct: 404 VTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFED 463
Query: 392 MVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNN 451
+ K + + + I+G + EDA+ K + M Y+++ S K +
Sbjct: 464 LQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGS 523
Query: 452 PVMAKNVLSEMMKNGLRPNVSVYRRVLK-HLHTSHQEHMAK 491
A +L +M ++G PN Y +++ HL AK
Sbjct: 524 LSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAK 564
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/117 (20%), Positives = 50/117 (42%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y IL+ +C + ++ ++++ + + Y ++ +CK G+ DA L
Sbjct: 438 VMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFC 497
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+ + P+ +TY + I C+ G A +M + G P T+ I+ +
Sbjct: 498 SLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 554
Score = 39.3 bits (90), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 43/102 (42%)
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
K + + Y +I+ MC+ + +L + G +P +TY ++ LCK G ++A
Sbjct: 468 KMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 527
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
LL +M P+ TY I R G + +M
Sbjct: 528 NILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569
>gi|297724361|ref|NP_001174544.1| Os05g0583900 [Oryza sativa Japonica Group]
gi|42491383|gb|AAS16889.1| hypothetical protein [Oryza sativa Japonica Group]
gi|255676609|dbj|BAH93272.1| Os05g0583900 [Oryza sativa Japonica Group]
Length = 467
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 85/183 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI E CR +F+ R L EM G ++YN ++ LC++G+ DA +LL+ M
Sbjct: 111 YNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMR 170
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P IT+ + + + GK A FFNQM G QP T+ I G+
Sbjct: 171 TEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMT 230
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + + ++ + + Y++L + N+ A +L+ M K GL + Y ++
Sbjct: 231 RANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLV 290
Query: 479 KHL 481
+ L
Sbjct: 291 RAL 293
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 126/324 (38%), Gaps = 41/324 (12%)
Query: 198 CSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVL 257
C+ +++ C + D R++ ++ + + NE + L + +KG + + E +
Sbjct: 41 CTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKG-FALFEEM 99
Query: 258 NQVGGSCLVSGVRALIEMFSVLGLYEMAKYV-----IKKTERKVSYYNILIKEMCRRCDF 312
+ G + LI + G +E A+ + ++ R V YN LI +CR
Sbjct: 100 RRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKL 159
Query: 313 ------------KGPR------DLLVE-----------------MRQVGCEPITLTYNYV 337
+G R +LLV+ M+ G +P +TYN +
Sbjct: 160 WDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNML 219
Query: 338 LGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
+ C+ A L +M R P +TY I I R AF M K GL
Sbjct: 220 IAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGL 279
Query: 398 QPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKN 457
+ T+ ++ + +DA K +K SN++Y ++ + + + A
Sbjct: 280 EVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALK 339
Query: 458 VLSEMMKNGLRPNVSVYRRVLKHL 481
++ EM + GL PN + Y ++ L
Sbjct: 340 LIMEMRQKGLIPNSASYGLTIRVL 363
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 85/179 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +NI+I +C+ D R LL M+ +GC P +TYN ++ K G+ + +L+
Sbjct: 194 VFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVG 253
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM G C PD +TY + C+ G+ + A+++F +M + G+ + T + F+ +
Sbjct: 254 EMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNG 313
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+A K K + + Y+ L K A + +EM++ G+ NV Y
Sbjct: 314 MVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTY 372
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 91/220 (41%), Gaps = 35/220 (15%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K E VS Y LI +C + LL +M + G +P + Y ++ K ++++
Sbjct: 433 KGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESE 492
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A LL++M+ P+ +TY + C+ G D A + FN+MV GL+P + + A +
Sbjct: 493 AIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVD 552
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNN------------------ 451
G R + A + DK S N++ + L H K N
Sbjct: 553 GLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQL 612
Query: 452 -----------------PVMAKNVLSEMMKNGLRPNVSVY 474
A+ VLSEM++NG+ P+ VY
Sbjct: 613 DLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVY 652
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 92/207 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN L+ C+ + EM++ G +T++ + CKNG +A +L
Sbjct: 264 VVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFA 323
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M + P+ +TY + +C+ G+ D A N+MV++G+ + T+ + G
Sbjct: 324 QMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEG 383
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ +A L ++ +LY+ L H N A ++LSEM G+ +VS+Y
Sbjct: 384 KVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYG 443
Query: 476 RVLKHLHTSHQEHMAKCLSSRYSSLSL 502
++ L + AK L ++ L
Sbjct: 444 ALIWGLCNLQKLDEAKSLLNKMDECGL 470
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 63/146 (43%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P T+N ++ LCK G A+A LL M C PD +TY I + G+ +
Sbjct: 192 PNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKL 251
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
+M G +P + T+ A + + F R E AY Y + ++ + +S K
Sbjct: 252 VGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCK 311
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVY 474
N A + ++M G++PN Y
Sbjct: 312 NGMVREAMKLFAQMRMKGMKPNEVTY 337
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 87/226 (38%), Gaps = 6/226 (2%)
Query: 258 NQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRD 317
N+V +CLV G + L L + V + V Y +L+ +C+ D
Sbjct: 333 NEVTYTCLVDGTCKAGRLDDALVLTN--EMVQQGVPLNVVTYTVLVDGLCKEGKVAEAED 390
Query: 318 LLVEMRQVGCEPITLTYNYVLG--VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
+ M + G L Y ++ + KN + A LL EM + D Y I
Sbjct: 391 VFRLMERAGIRANELLYTTLIHGHFVYKNSERA--LSLLSEMKDKGMELDVSLYGALIWG 448
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
C + K D A + N+M + GL+P + + F + +A + D +
Sbjct: 449 LCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPN 508
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ Y L K + A + ++M+ GL PNV Y ++ L
Sbjct: 509 IVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGL 554
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 79/176 (44%), Gaps = 16/176 (9%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
VS YN LI +CR+ D + R+L+ EM + +TYN ++ LC G+ A LL+
Sbjct: 376 VSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLD 435
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM + P +TY I C+ G A N +QM K G +AT+ IKG+
Sbjct: 436 EMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKD 495
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
+ EDA + +K + M Y + V EMM+ G P++
Sbjct: 496 KLEDANGLLNEMLEKGLIPNRMTYEI----------------VTEEMMEKGFVPDI 535
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 4/196 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+NILI C+ + + EM + G +P +TYN ++ LC NG+ +A L ++M+
Sbjct: 239 FNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMV 298
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ IT+ + C+ A F+ M K+G+ P + T+ I Y E
Sbjct: 299 NSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENME 358
Query: 419 DAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
DA+ Y ++ + L+A L K + A+N++SEM L+ ++ Y +
Sbjct: 359 DAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEA-ARNLVSEMDTKHLKADLITYNIL 417
Query: 478 LKHLHTSHQEHMAKCL 493
+ L ++ M K L
Sbjct: 418 IDSL--CNKGEMKKAL 431
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 81/186 (43%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V+ YNILI C+ + + L M G P TYN ++ LC+ G A L+
Sbjct: 341 VTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVS 400
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM ++ D ITY I I C G+ A ++M ++GL+P T+ I GY
Sbjct: 401 EMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEG 460
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
A + ++ Y++L K + A +L+EM++ GL PN Y
Sbjct: 461 NLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYE 520
Query: 476 RVLKHL 481
V + +
Sbjct: 521 IVTEEM 526
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 100/215 (46%), Gaps = 9/215 (4%)
Query: 265 LVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQ 324
L+SG+ + E+ + +Y+ + + ++ E + +NI+I +C+ D++ +M+
Sbjct: 134 LMSGLVKVGEIGDMEFVYK--EMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKV 191
Query: 325 VGCEPITLTYNYVLGVLCKNGQ-----DADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
G +TYN ++ CK G+ ADA +L+EM P+ +T+ I I C+
Sbjct: 192 RGVSANVITYNTLIDGYCKMGKIGKMYKADA--ILKEMRADGICPNEVTFNILIDGFCKD 249
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
A F +M ++G++P + T+ + I G + +A + + + +
Sbjct: 250 KNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITH 309
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ L + KN A + +M K G+ PNV+ Y
Sbjct: 310 NALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTY 344
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 81/188 (43%), Gaps = 10/188 (5%)
Query: 312 FKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEI 371
FK D +++ C P+ + L K G+ D + +EM+ R P I++ I
Sbjct: 116 FKRASDYGLKLSVTSCNPL-------MSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNI 168
Query: 372 FIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKY 431
I C+VGK + A + M RG+ + T+ I GY + YK + +
Sbjct: 169 VINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMR 228
Query: 432 KSS---SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEH 488
+ + +++L K+ N A V +EM + G++PNV Y ++ L + + +
Sbjct: 229 ADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVN 288
Query: 489 MAKCLSSR 496
A L +
Sbjct: 289 EATALRDQ 296
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 93/221 (42%), Gaps = 3/221 (1%)
Query: 289 IKKTERKVSYYNILIKEMCRRCDFKG---PRDLLVEMRQVGCEPITLTYNYVLGVLCKNG 345
++ V YN LI C+ +L EMR G P +T+N ++ CK+
Sbjct: 191 VRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDK 250
Query: 346 QDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
+ A ++ EM + P+ +TY I C GK + A +QMV L+P + TH
Sbjct: 251 NVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHN 310
Query: 406 AFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKN 465
A + G+ + A + + + + Y++L + K+ N A + M+
Sbjct: 311 ALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGK 370
Query: 466 GLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
G+ P+VS Y ++ L A+ L S + L + +
Sbjct: 371 GVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADL 411
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 91/205 (44%)
Query: 286 KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNG 345
+ +K V +NILI +C+ D L EM+ GC P +TYN ++ LC +G
Sbjct: 396 ELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSG 455
Query: 346 QDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
+ A A +LL+EM C +TY I C+ + + A F+QM G+ T
Sbjct: 456 KLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFN 515
Query: 406 AFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKN 465
I G R +DA + V + +N+ Y+ + + + K N A ++L M N
Sbjct: 516 TLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTAN 575
Query: 466 GLRPNVSVYRRVLKHLHTSHQEHMA 490
G +V Y ++ L + + A
Sbjct: 576 GFEVDVVTYATLINGLCKARRTQAA 600
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 77/189 (40%), Gaps = 8/189 (4%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ +N LI +C + DL E+ G P T+N ++ LCK G A L E
Sbjct: 371 TTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFE 430
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM C PD +TY I I C GK A + +M G T+ I G
Sbjct: 431 EMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRR 490
Query: 416 RYEDAYKYV----VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
R E+A + V + + N L L + ++ A ++ +M+ GL+PN
Sbjct: 491 RIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDD----AAELVDQMISEGLQPNN 546
Query: 472 SVYRRVLKH 480
Y +L H
Sbjct: 547 VTYNSILTH 555
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 2/184 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I +C+R + ++ +M G +T+N ++ LC + DA EL+++M+
Sbjct: 479 YNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMI 538
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ +TY + + C+ G A + M G + + T+A I G R +
Sbjct: 539 SEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQ 598
Query: 419 DAYKYV-VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
A K + + K + ++ SL + NN A ++ EM + G P+ Y+ V
Sbjct: 599 AALKLLRGMRMKGMKPTPKAYNPVIQSLF-RGNNGRDALSLFREMTEVGGPPDAFTYKIV 657
Query: 478 LKHL 481
+ L
Sbjct: 658 FRGL 661
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 79/196 (40%), Gaps = 2/196 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ + K EM G EP +T+N V+ LC+ Q A +LEEM
Sbjct: 164 YNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMS 223
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD T+ + G + A +M + G P T I GY R
Sbjct: 224 SCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVG 283
Query: 419 DAYKYVVLS-ADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
DA Y+ AD ++ + + L +N + A VL M++ G P+V Y V
Sbjct: 284 DALGYIQQEIADGFEPDRVTFSTFVNGLC-QNGHVDHALKVLGLMLQEGCEPDVYTYSTV 342
Query: 478 LKHLHTSHQEHMAKCL 493
+ L + + AK +
Sbjct: 343 INCLCNNGELEEAKGI 358
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 89/221 (40%), Gaps = 3/221 (1%)
Query: 270 RALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEP 329
RA +VL L EM+ + E + + L++ + L M ++GC P
Sbjct: 208 RARQARTAVLMLEEMSSCDVAPDE---TTFTTLMEGFVEEGSIEAALRLKARMSEMGCSP 264
Query: 330 ITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFF 389
++T N ++ CK G+ DA +++ + PD +T+ F+ C+ G D A
Sbjct: 265 TSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVL 324
Query: 390 NQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKN 449
M++ G +P + T++ I E+A V D ++ L
Sbjct: 325 GLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTE 384
Query: 450 NNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
N A ++ E+ GL PNV + ++ L H+A
Sbjct: 385 NQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLA 425
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 82/195 (42%), Gaps = 2/195 (1%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N+LI C+ + + G EP +T++ + LC+NG A ++L ML
Sbjct: 270 NVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQ 329
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
C PD TY I C G+ + A NQMV G P T I + E+
Sbjct: 330 EGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEE 389
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
A K S + +++L + K +P +A + EM +G P+ Y ++
Sbjct: 390 ALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILID 449
Query: 480 HLHTSHQEHMAKCLS 494
+L +S + +AK L
Sbjct: 450 NLCSSGK--LAKALD 462
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 73/189 (38%), Gaps = 1/189 (0%)
Query: 294 RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACEL 353
R +N LI +C +L+ +M G +P +TYN +L CK G + A ++
Sbjct: 509 RNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADI 568
Query: 354 LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
L+ M D +TY I C+ + A M +G++P + I+ F
Sbjct: 569 LQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFR 628
Query: 414 FYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM-AKNVLSEMMKNGLRPNVS 472
DA + Y ++ + P+ A + L EM NG P S
Sbjct: 629 GNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFS 688
Query: 473 VYRRVLKHL 481
+R + + L
Sbjct: 689 SFRMLAEGL 697
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 49/119 (41%), Gaps = 1/119 (0%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V Y LI +C+ + LL MR G +P YN V+ L + DA
Sbjct: 578 EVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALS 637
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGK-FDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
L EM PDA TY+I CR G AF+F +M G P ++ +G
Sbjct: 638 LFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEG 696
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 63/153 (41%), Gaps = 3/153 (1%)
Query: 350 ACELLEEMLGRN--CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAF 407
A +L L R+ P YE I G FD+ +M + G + L +F
Sbjct: 72 ALRMLNSALARDDGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSF 131
Query: 408 IKGYFIFYRYEDAYKYVVLSADKYKSSSNM-LYSLLASLHDKNNNPVMAKNVLSEMMKNG 466
I Y ++DA+ V D + +N +Y+ L ++ + + + ++ +EM G
Sbjct: 132 IGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQG 191
Query: 467 LRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSS 499
+ P+V + V+ L + Q A + SS
Sbjct: 192 IEPDVVTFNTVIDALCRARQARTAVLMLEEMSS 224
>gi|147838532|emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]
Length = 676
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 109/259 (42%), Gaps = 13/259 (5%)
Query: 234 GFLPVLISSKALTKKGI--------WRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMA 285
GF+P +I+S L + W V E + + G + + L + G
Sbjct: 263 GFVPTVITSNYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKV 322
Query: 286 KYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
++K E + + YN LI CR+ L M + G P ++Y ++
Sbjct: 323 NKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNG 382
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
LCK G+ +A +L M+ R PD +TY I C+ GK + + + M+ G+ P
Sbjct: 383 LCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPD 442
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
T ++GY ++ A VV S S +YS L + N P AKN+L
Sbjct: 443 SFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLE 502
Query: 461 EMMKNGLRPNVSVYRRVLK 479
M ++G + + +Y ++K
Sbjct: 503 RMSQDGHKXELEIYNELIK 521
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 82/207 (39%), Gaps = 35/207 (16%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG------------------- 339
+++L+K R + M +VG P +T NY+L
Sbjct: 236 FDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVYEEME 295
Query: 340 ----------------VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
VLCK+G + LE+M PD +TY I CR G+ D
Sbjct: 296 RFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLD 355
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
AF + M +RG+ P L ++ A + G R +A++ + S + Y+ L
Sbjct: 356 DAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLI 415
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPN 470
+ K ++++L +M+ NG+ P+
Sbjct: 416 HGYCKEGKMQESRSLLHDMIWNGISPD 442
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 96/247 (38%), Gaps = 5/247 (2%)
Query: 241 SSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLY-EMAKYVIKKTERKVSYY 299
S++L IW + + LV G + S L L E+ ++ + ++ SY
Sbjct: 426 ESRSLLHDMIWNGISP-DSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSY- 483
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
LI +CR ++LL M Q G + YN ++ C+ A+A L EM+
Sbjct: 484 --LIVALCRENRPFAAKNLLERMSQDGHKXELEIYNELIKSFCQCDCIAEALLLKMEMVD 541
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
+ P+ TY J R+ + + +MV G P L A GY +
Sbjct: 542 KEIKPNLATYRAVJGCLSRLSRSMEGESLVGEMVASGXLPDLEICRALFYGYCRENDIDK 601
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
A + A +++ ++ L + + + + M+K GL PN + V+
Sbjct: 602 AESLLSFXAKEFQIHDTESFNALIRITSAKGDIARSLEIQDMMLKMGLLPNPLTCKYVID 661
Query: 480 HLHTSHQ 486
L + +
Sbjct: 662 GLWKARR 668
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 85/186 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN +I +C+ ++L M + G P TYN ++ C +GQ +A L+
Sbjct: 234 VVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLK 293
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M PD +TY + Y C+ G+ A F+ M KRGL+P + T+ ++GY
Sbjct: 294 KMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKG 353
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ + + L ++ ++S+L + K A V S+M + GL P+ Y
Sbjct: 354 ALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYG 413
Query: 476 RVLKHL 481
V+ L
Sbjct: 414 TVIGIL 419
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 100/224 (44%), Gaps = 12/224 (5%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTER-KVSYYNILIKEMCRRCDFKGPRDLLV 320
GSC +G L F+ LG VIKK R + L+K +C D+++
Sbjct: 99 GSCCCAGRLDL--GFAALG------NVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVL 150
Query: 321 E-MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML--GRNCHPDAITYEIFIVYSC 377
M Q+GC P +YN +L LC + +A ELL+ M G +C PD ++Y I
Sbjct: 151 RRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFF 210
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ G D A+ +++M+ RG+ P + T+ + I + A + + +
Sbjct: 211 KEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCR 270
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y+ + + + P A L +M +G+ P+V Y ++ +L
Sbjct: 271 TYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYL 314
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 78/187 (41%), Gaps = 2/187 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVG--CEPITLTYNYVLGVLCKNGQDADACELLEE 356
YNIL+K +C + +LL M G C P ++Y V+ K G A E
Sbjct: 165 YNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHE 224
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
ML R P+ +TY I C+ D A MVK G+ P T+ + + GY +
Sbjct: 225 MLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
++A ++ + Y+ L KN A+ + M K GL+P ++ Y
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344
Query: 477 VLKHLHT 483
+L+ T
Sbjct: 345 LLQGYAT 351
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 106/256 (41%), Gaps = 40/256 (15%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPI 330
AL+EM +L L M + I ++ILI ++ + +MRQ G P
Sbjct: 354 ALVEMHGLLDL--MVRNGIHPNHY---VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPD 408
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA----- 385
T+TY V+G+LCK+G+ DA E+M+ P I Y I C K+D A
Sbjct: 409 TVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELIL 468
Query: 386 -------------FN-----------------FFNQMVKRGLQPRLATHAAFIKGYFIFY 415
FN F+ MV+ G++P + T++ I GY +
Sbjct: 469 EMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAG 528
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ ++A K + + Y+ L + + K + A + EM +G+ P++ Y
Sbjct: 529 KMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYN 588
Query: 476 RVLKHLHTSHQEHMAK 491
+L+ L + + AK
Sbjct: 589 IILQGLFQTRRTAAAK 604
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 80/178 (44%), Gaps = 6/178 (3%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V YN L+ +C+ R + M + G +P TY +L G +
Sbjct: 301 EPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHG 360
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
LL+ M+ HP+ + I I + GK D A F++M ++GL P T+ I
Sbjct: 361 LLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC 420
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLY-SLLASL--HDKNNNPVMAKNVLSEMMKNGL 467
R EDA +Y D+ S N++Y SL+ SL DK + AK ++ EM+ G+
Sbjct: 421 KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDK---AKELILEMLDRGI 475
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 79/183 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C + ++L++EM G T+ +N ++ CK G+ ++ +L + M+
Sbjct: 447 YNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMV 506
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ ITY I C GK D A MV G++P T+ I GY R E
Sbjct: 507 RIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRME 566
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA S + Y+++ + AK + + ++G + +S Y +L
Sbjct: 567 DALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIIL 626
Query: 479 KHL 481
L
Sbjct: 627 HGL 629
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/184 (19%), Positives = 82/184 (44%)
Query: 295 KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
+++ Y L++ + LL M + G P ++ ++ K G+ A +
Sbjct: 338 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVF 397
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
+M + +PD +TY I C+ G+ + A +F QM+ L P + + I IF
Sbjct: 398 SKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIF 457
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+++ A + ++ D+ + ++ + H K + ++ + M++ G++PN+ Y
Sbjct: 458 DKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITY 517
Query: 475 RRVL 478
++
Sbjct: 518 STLI 521
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNI+++ + + ++L V + + G + TYN +L LCKN +A + + +
Sbjct: 587 YNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 646
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
+ + T+ I I +VG+ D A + F + GL P + T++
Sbjct: 647 LTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYS 693
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 68/184 (36%), Gaps = 2/184 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI C+ + L EM G P +TYN +L L + + A A EL +
Sbjct: 552 YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT 611
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ TY I + C+ D A F + LQ T I R +
Sbjct: 612 ESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRND 671
Query: 419 DAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+A + LSA+ YSL+A + ++ M +NG N + +
Sbjct: 672 EAKDLFAALSANGLVPDVRT-YSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSI 730
Query: 478 LKHL 481
++ L
Sbjct: 731 VRKL 734
>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Glycine max]
Length = 664
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V YN+L+K +C+ G LLVEM + GC P ++Y V+ +C++G+ +A E
Sbjct: 177 EPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEARE 236
Query: 353 --------------------------------LLEEMLGRNCHPDAITYEIFIVYSCRVG 380
L++EM+G P+ ++Y I + VG
Sbjct: 237 VARRFGAEGVVSVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVG 296
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA---YKYVVLSADKYKSSSNM 437
+ ++A +M++RG +P + T ++ +KGYF+ R + ++ +VL + + +
Sbjct: 297 EVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVR---PNVV 353
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGL-RPNVSVY 474
+Y+ L + + N A +V M K+ RPNV+ Y
Sbjct: 354 VYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTY 391
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 5/159 (3%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
MR G EP TYN +L LCKNG+ AC+LL EM R C PD ++Y + C G+
Sbjct: 171 MRGEGMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGR 230
Query: 382 FDVAFNFFNQMVKR-GLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+ A ++ +R G + ++ A I G R + + + + + YS
Sbjct: 231 VEEA----REVARRFGAEGVVSVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYS 286
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
+ S +A VL +M++ G RPNV + ++K
Sbjct: 287 SVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMK 325
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 97/235 (41%), Gaps = 23/235 (9%)
Query: 249 GIWRVVEVLNQVGGSCLVSGVRALIEMFSVL-------GLYEMAKYVIKKTERK------ 295
G+WRV+ ++ GVR + +++ L G A V + E+
Sbjct: 338 GLWRVM----------VLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPN 387
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V+ Y+ L+ + D +G ++ +M G P + Y ++ VLCKN A L++
Sbjct: 388 VTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLID 447
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M C P +T+ FI C G+ A +QM + G P T+ + G F
Sbjct: 448 NMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVN 507
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
++A + + ++ + + Y+ + + VL M+ NG++P+
Sbjct: 508 ELKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPD 562
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 83/185 (44%), Gaps = 11/185 (5%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +N IK +C ++ +M++ GC P T TYN +L L + +ACEL+
Sbjct: 458 VVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIR 517
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
E+ R + +TY + GK + +M+ G++P T I Y
Sbjct: 518 ELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLG 577
Query: 416 RYEDAYKYV-VLSADK-----YKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
+ A +++ ++A K + +++L+ + SL + A L++M+ G+ P
Sbjct: 578 KVRTAIQFLDRITAGKELCPDIIAHTSLLWGICNSLGIEE-----AIVYLNKMLNKGIFP 632
Query: 470 NVSVY 474
N++ +
Sbjct: 633 NIATW 637
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 5/143 (3%)
Query: 275 MFSVLGLYEMAKYVIKKTERKVSY----YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPI 330
+FSV L E + + + ERKV YN ++ + +L M G +P
Sbjct: 503 LFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPD 562
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEML-GRNCHPDAITYEIFIVYSCRVGKFDVAFNFF 389
+T N V+ K G+ A + L+ + G+ PD I + + C + A +
Sbjct: 563 AITVNVVIYAYSKLGKVRTAIQFLDRITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYL 622
Query: 390 NQMVKRGLQPRLATHAAFIKGYF 412
N+M+ +G+ P +AT ++G+F
Sbjct: 623 NKMLNKGIFPNIATWDVLVRGFF 645
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 88/194 (45%), Gaps = 2/194 (1%)
Query: 286 KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNG 345
+ V K + V + LI +C+ + RD+L M +G P +TYN ++ LCK+G
Sbjct: 388 EMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSG 447
Query: 346 QDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
+ + CE LEEM+ C P+++TY + CR + D A +++ G P T+
Sbjct: 448 RIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYN 507
Query: 406 AFIKGYFIFYRYEDAYKYV-VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMK 464
+ G + + E A + + ++ S + LH ++ N +L ++
Sbjct: 508 ILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLH-RSGNLAGTMELLRVVLA 566
Query: 465 NGLRPNVSVYRRVL 478
G+ P+ + +L
Sbjct: 567 KGMLPDATTCSSIL 580
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 1/139 (0%)
Query: 287 YVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL-VEMRQVGCEPITLTYNYVLGVLCKNG 345
+ ++ + R V+ YNI+++ +CR + ++ EM + G P +TYN ++ LCK+
Sbjct: 36 FFVRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSN 95
Query: 346 QDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
+ EL EE++ R HPD +TY I C+ G + A M RG P + T++
Sbjct: 96 ELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYS 155
Query: 406 AFIKGYFIFYRYEDAYKYV 424
I G R ++A + +
Sbjct: 156 VLINGLCKVGRIDEARELI 174
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 6/199 (3%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCE--PITLTYNYVLGVLCKNGQDADACEL 353
V Y++LI +C+ R+L+ EM + C+ P +TYN L LCK A+ACEL
Sbjct: 151 VVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACEL 210
Query: 354 LEEMLGRNCH--PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
+ + + PD +T+ I C+ G+ D A N + M+ G P + T+ A + G
Sbjct: 211 MRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGL 268
Query: 412 FIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
+ E A+ + DK + + YS+L K + A +L M G PNV
Sbjct: 269 CKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNV 328
Query: 472 SVYRRVLKHLHTSHQEHMA 490
+ ++ L S + A
Sbjct: 329 VTFNSIIDGLCKSDRSGEA 347
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 94/214 (43%)
Query: 288 VIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQD 347
V K V Y++L+ C+ +LL M GC P +T+N ++ LCK+ +
Sbjct: 285 VDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRS 344
Query: 348 ADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAF 407
+A ++ ++ R PD +T+ I I +C+ G F+ A F +MV + +QP + T A
Sbjct: 345 GEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGAL 404
Query: 408 IKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
I G + E A + L + + + Y++L K+ L EM+ +G
Sbjct: 405 IDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGC 464
Query: 468 RPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLS 501
P Y ++ L + + A L S+ S
Sbjct: 465 VPESMTYGSLVYALCRASRTDDALQLVSKLKSFG 498
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 77/171 (45%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M G P +TYN ++ LCK + A ++E M+ + PD ITY + + C+
Sbjct: 248 DMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKAS 307
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+ D A + M RG P + T + I G R +A++ + ++ + ++
Sbjct: 308 RVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFN 367
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
+L + K N A + EM+ ++P+V + ++ L + Q A+
Sbjct: 368 ILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAAR 418
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 65/130 (50%), Gaps = 5/130 (3%)
Query: 283 EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLC 342
EMA+ + T + YN +I +C+ + +L E+ + G P +TYN ++ LC
Sbjct: 71 EMARDGVAPT---IVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLC 127
Query: 343 KNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG--LQPR 400
K G +A L M R C P+ +TY + I C+VG+ D A +M ++ + P
Sbjct: 128 KAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPN 187
Query: 401 LATHAAFIKG 410
+ T+ +F+ G
Sbjct: 188 IITYNSFLDG 197
>gi|38344321|emb|CAE02149.2| OSJNBa0058K23.3 [Oryza sativa Japonica Group]
gi|38345611|emb|CAD41894.2| OSJNBa0093O08.13 [Oryza sativa Japonica Group]
Length = 368
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 8/177 (4%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+NIL+K +C+ F LL EM + GC P TY+ ++ LC++GQ A EL E M
Sbjct: 180 FNILVKGLCQFGKFGDAISLLYEMPKQGCVPNVTTYSTLMNFLCQHGQVDKAFELCERMQ 239
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ DA+ Y I I CR + AFN F MV +G P T+ + G ++
Sbjct: 240 KEDIVADAVVYNILIAGLCREQRVTEAFNLFKSMVPKGCYPNSGTYQVLLDGLLSSGKFV 299
Query: 419 DAYKYV-VLSADKYK---SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
+A V ++ A++ + SS +L L S++ ++ A VL +M++ G P +
Sbjct: 300 EAKGLVSMMRAERMRPGFSSFKLLIDGLCSVNCLDD----AHLVLKQMVEQGFVPRL 352
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 87/201 (43%), Gaps = 3/201 (1%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L+ M Y + + +Y +L +C+R ++ ++ + ++G T +N ++
Sbjct: 130 LFAMPGYNCWPSTKTFNY--VLHMLVCKR-QYEVVHEVYLSASRLGVTLDTCCFNILVKG 186
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
LC+ G+ DA LL EM + C P+ TY + + C+ G+ D AF +M K +
Sbjct: 187 LCQFGKFGDAISLLYEMPKQGCVPNVTTYSTLMNFLCQHGQVDKAFELCERMQKEDIVAD 246
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
+ I G R +A+ K ++ Y +L + V AK ++S
Sbjct: 247 AVVYNILIAGLCREQRVTEAFNLFKSMVPKGCYPNSGTYQVLLDGLLSSGKFVEAKGLVS 306
Query: 461 EMMKNGLRPNVSVYRRVLKHL 481
M +RP S ++ ++ L
Sbjct: 307 MMRAERMRPGFSSFKLLIDGL 327
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 8/231 (3%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+ +C SGV +++F+ EM K + V YN+LIK C+ L
Sbjct: 223 IDATCKESGVGQAMKLFN-----EMRN---KGCKPDVVTYNVLIKGFCKGGRLDEAIRFL 274
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
++ GC+P +++N +L LC G+ DA +LL ML + C P +T+ I I + C+
Sbjct: 275 KKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQK 334
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
G A N M K G P + I+G+ + A +Y+ + + + Y
Sbjct: 335 GLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTY 394
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
++L + K+ A +LS++ G P++ Y V+ L + +A
Sbjct: 395 NILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELA 445
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 103/247 (41%), Gaps = 10/247 (4%)
Query: 234 GFLPVLISSKALTK--------KGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMA 285
G P +I+ AL + K +++ +L + G V+ LI + G E A
Sbjct: 109 GKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEA 168
Query: 286 KYVIKK--TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
V+ + + Y+ ++ +C R K +L Q C P +T ++ CK
Sbjct: 169 LRVLDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCK 228
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
A +L EM + C PD +TY + I C+ G+ D A F ++ G QP + +
Sbjct: 229 ESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVIS 288
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
H ++ R+ DA K + K S + +++L + + A NVL M
Sbjct: 289 HNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMP 348
Query: 464 KNGLRPN 470
K+G PN
Sbjct: 349 KHGHTPN 355
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 86/183 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N LI+ C + L M GC P +TYN +L LCK+G+ DA +L ++
Sbjct: 359 FNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLS 418
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C P I+Y I +VGK ++A +M +GL+P L T + + G +
Sbjct: 419 SKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVR 478
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A K+ + +Y+ + + K+ +A + L++M+ G +P + Y ++
Sbjct: 479 EAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLI 538
Query: 479 KHL 481
K +
Sbjct: 539 KGI 541
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 104/262 (39%), Gaps = 46/262 (17%)
Query: 272 LIEMFSVLGLYEMAKYVIKK-----TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI+ F G + A +KK + V +N++++ +C + LL M + G
Sbjct: 257 LIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKG 316
Query: 327 CEPITLTYNYVLGVLCK----------------------------------NGQDAD-AC 351
C P +T+N ++ LC+ NG+ D A
Sbjct: 317 CLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAI 376
Query: 352 ELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
E LE M+ R C+PD +TY I + C+ GK D A +Q+ +G P L ++ I G
Sbjct: 377 EYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGL 436
Query: 412 FIFYRYEDAYKYVVLSADKYKSSSNMLY---SLLASLHDKNNNPVMAKNVLSEMMKNGLR 468
+ E A + +L YK L S++ L + A + + +R
Sbjct: 437 LKVGKAELAVE--LLEEMCYKGLKPDLITCTSVVGGL-SREGKVREAMKFFHYLKRFAIR 493
Query: 469 PNVSVYRRVLKHLHTSHQEHMA 490
PN +Y ++ L S Q +A
Sbjct: 494 PNAFIYNSIITGLCKSQQTSLA 515
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 87/216 (40%), Gaps = 40/216 (18%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM---- 357
LI+E C+ K ++ + + G +YN ++ CK+G+ +A +L+ M
Sbjct: 120 LIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEALRVLDRMGVSP 179
Query: 358 ------------------------LGRN----CHPDAITYEIFIVYSCRVGKFDVAFNFF 389
LGR C+PD +T + I +C+ A F
Sbjct: 180 NAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLF 239
Query: 390 NQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV----VLSADKYKSSSNMLYSLLASL 445
N+M +G +P + T+ IKG+ R ++A +++ S NM+ L S
Sbjct: 240 NEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCS- 298
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ A +L+ M++ G P+V + ++ L
Sbjct: 299 ---GGRWMDAMKLLATMLRKGCLPSVVTFNILINFL 331
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 36/79 (45%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
+++ P YN ++ LCK+ Q + A + L +M+ + C P TY I G
Sbjct: 487 LKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGL 546
Query: 382 FDVAFNFFNQMVKRGLQPR 400
+ A N++ RGL R
Sbjct: 547 AEDASKLSNELYSRGLVKR 565
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 90/183 (49%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V ++++I +C+ F+ D++ +M+ G P +TYN ++ CK G+ A LL+
Sbjct: 229 VVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLK 288
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM+ + HP+ IT+ I I CR A F +M ++GLQP + T+ + I G
Sbjct: 289 EMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNG 348
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ ++A + + + Y+ L + K A+ +L ++ K GL PNV +
Sbjct: 349 KLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFN 408
Query: 476 RVL 478
++
Sbjct: 409 TLI 411
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 22/257 (8%)
Query: 225 QVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEM 284
V + KA+GF P +I+ + + G C +MF L +
Sbjct: 250 DVVEDMKAWGFSPSVITYNTI--------------IDGYCKAG------KMFKADAL--L 287
Query: 285 AKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKN 344
+ V K+ +NILI CR + + + EM++ G +P +TYN ++ LC N
Sbjct: 288 KEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSN 347
Query: 345 GQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
G+ +A L ++M G P+ +TY I C+ A + + KRGL P + T
Sbjct: 348 GKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITF 407
Query: 405 AAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMK 464
I Y R +DA+ + D + Y+ L + N A+ + EM
Sbjct: 408 NTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEG 467
Query: 465 NGLRPNVSVYRRVLKHL 481
NGL+ ++ Y ++ L
Sbjct: 468 NGLKADLVTYNILVDAL 484
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 86/191 (45%), Gaps = 20/191 (10%)
Query: 232 AFGFLPVLISSKALT-----KKGIWRVVEVLNQVGGSCLVSGV---RALIEMFSVLGLYE 283
G P +++ AL KK + E+L+ +G L V LI+ + G +
Sbjct: 362 GMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMD 421
Query: 284 MA---KYVIKKTE--RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
A + ++ T VS YN LI CR + K R L EM G + +TYN ++
Sbjct: 422 DAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILV 481
Query: 339 GVLCKNGQDADACELLEEML-----GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
LCK G+ A LL+EM GR + +TY + I C GK + A N+M+
Sbjct: 482 DALCKKGETRKAVRLLDEMTLMEKKGR--RANIVTYNVLIKGFCNKGKLEEANRLLNEML 539
Query: 394 KRGLQPRLATH 404
++GL P T+
Sbjct: 540 EKGLIPNRTTY 550
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 79/176 (44%)
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN 390
L+ N +L L K G+ + +EM+ R + +T+++ I C+VGKF A +
Sbjct: 194 ALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVE 253
Query: 391 QMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNN 450
M G P + T+ I GY + A + K + + +++L ++
Sbjct: 254 DMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDE 313
Query: 451 NPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
N AK V EM + GL+PNV Y ++ L ++ + A L + S + L +V
Sbjct: 314 NVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNV 369
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 83/216 (38%), Gaps = 27/216 (12%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+ G C ++ EM +G +A VI +N LI + L
Sbjct: 376 INGFCKKKMLKEAREMLDDIGKRGLAPNVIT--------FNTLIDAYGKAGRMDDAFLLR 427
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
M G P TYN ++ C+ G +A +L +EM G D +TY I + C+
Sbjct: 428 SMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKK 487
Query: 380 GKFDVAFNFFNQMV---KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
G+ A ++M K+G + + T+ IKG+ + E+A + + +K +
Sbjct: 488 GETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNR 547
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
Y +L EMM+ G P++
Sbjct: 548 TTYDILR----------------DEMMEKGFIPDID 567
>gi|356574874|ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 576
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 91/183 (49%), Gaps = 3/183 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I CR F +++ M+ G P +TYN ++G LC G+ A ++++++L
Sbjct: 149 YNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKVMDQLL 208
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
NC+P ITY I I + G D A ++M+ RGLQP + T+ ++G +
Sbjct: 209 EDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCKRGLVD 268
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A+++V ++ + S LY+LL + ++S+M+ G PN+ Y ++
Sbjct: 269 RAFEFV---SNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYSVLI 325
Query: 479 KHL 481
L
Sbjct: 326 SSL 328
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 83/174 (47%), Gaps = 8/174 (4%)
Query: 312 FKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEI 371
++ L+ +M GCEP +TY+ ++ LC++G+ +A ++L M + +PDA Y+
Sbjct: 299 WEAGERLMSDMIVKGCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDP 358
Query: 372 FIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY----KYVVLS 427
I C+ GK D+A F + M+ G P + + + R ++A K +
Sbjct: 359 LISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVG 418
Query: 428 ADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
SS N ++ L S DK + A ++ EM+ NG+ P+ Y ++ L
Sbjct: 419 CPPNASSYNTMFGALWSSGDK----IRALTMILEMLSNGVDPDRITYNSLISSL 468
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 64/144 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++ +C++ ++ ++ +VGC P +YN + G L +G A ++ EML
Sbjct: 391 YNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKIRALTMILEML 450
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD ITY I CR G D A M + QP + ++ + G +R
Sbjct: 451 SNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIVLLGLCKAHRIV 510
Query: 419 DAYKYVVLSADKYKSSSNMLYSLL 442
DA + + + D + Y+LL
Sbjct: 511 DAIEVLAVMVDNGCQPNETTYTLL 534
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 5/136 (3%)
Query: 280 GLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
G + A + KK E S YN + + D +++EM G +P +TY
Sbjct: 402 GRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKIRALTMILEMLSNGVDPDRITY 461
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N ++ LC++G +A LL +M P I+Y I ++ C+ + A MV
Sbjct: 462 NSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVD 521
Query: 395 RGLQPRLATHAAFIKG 410
G QP T+ ++G
Sbjct: 522 NGCQPNETTYTLLVEG 537
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 64/160 (40%), Gaps = 36/160 (22%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
+ Q G +P + YN V+ C++ + A ++ M R PD +TY I I C GK
Sbjct: 138 LEQYG-DPDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGK 196
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
D+A +Q+++ P + T+ I+ I +DA +
Sbjct: 197 LDLALKVMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMR------------------- 237
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+L EMM GL+P++ Y +++ +
Sbjct: 238 ----------------LLDEMMSRGLQPDMYTYNVIVRGM 261
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
C+ GK+ A F QMVKRG +P + IKG F R E A + V+ ++Y +
Sbjct: 88 CKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVR-VMEILEQYGDPDS 146
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y+ + S +++ A V+ M G P+V Y ++ L
Sbjct: 147 FAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSL 191
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 81/189 (42%), Gaps = 35/189 (18%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
++ + V Y++LI + R + E+++ G P TYN ++ CK G
Sbjct: 585 RRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDK 644
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A +LLEEM + +PD +TY I I C+ G+ + A N F+ + RGL P T+AA +
Sbjct: 645 ASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVD 704
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
GY K+ NP A +L EM+ G+ P
Sbjct: 705 GYC-----------------------------------KSKNPTAAFQLLEEMLLRGVPP 729
Query: 470 NVSVYRRVL 478
+ +Y +L
Sbjct: 730 DAFIYNVIL 738
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 133/339 (39%), Gaps = 74/339 (21%)
Query: 208 LDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTK---KG-----IWRVVEVL-- 257
+D Y M L+ NV+ L K F F P L+S +L KG W+V + +
Sbjct: 161 MDSYRKMGFLVEAVNVF---LGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCA 217
Query: 258 -----------NQVGGSCLVSGV----RALIEMFSVLGLYEMA-----KYVIKKTERKVS 297
N + C V V R L+EM L + A V K +
Sbjct: 218 HKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLY 277
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYN---------------------- 335
Y+ILI C + + +L+EM VG +P +TYN
Sbjct: 278 TYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEM 337
Query: 336 -------------YVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
+L +CK G+ A E+++EM+ + PD+ TY + I CR
Sbjct: 338 VACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNM 397
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA---YKYVVLSADKYKSSSNMLY 439
AF ++M KR L P + T++ I G + + +V++ K + ++Y
Sbjct: 398 ARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNA---VVY 454
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ L + H K ++ +L M + G+ P+V Y ++
Sbjct: 455 TTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLI 493
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 90/196 (45%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
M + + K E Y++LI+ CR + +LL EM++ P LTY+ ++ LC+
Sbjct: 369 MQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCR 428
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
G +L EM+ P+A+ Y + + G+ + + +M ++G+ P +
Sbjct: 429 CGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFC 488
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
+ + I G+ R E+A Y++ ++ + Y + K +A +EM+
Sbjct: 489 YNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEML 548
Query: 464 KNGLRPNVSVYRRVLK 479
G+ PNV +Y +++
Sbjct: 549 SCGVLPNVGIYTALIE 564
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ + + R +L MR+ G P YN ++ CK + +A L EML
Sbjct: 454 YTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEML 513
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R P+A TY FI + G+ ++A +FN+M+ G+ P + + A I+G+
Sbjct: 514 ERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVT 573
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A+ + YS+L +N A + SE+ + GL PN Y ++
Sbjct: 574 EAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLI 633
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 5/209 (2%)
Query: 271 ALIEMFSVLGLYEMA-----KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI+ F G E A + V E + +N L+ +C+ + +++ EM +
Sbjct: 316 ALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEK 375
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G EP + TY+ ++ C+ A A ELL+EM R P +TY + I CR G
Sbjct: 376 GVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGT 435
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
+MV GL+P + + + R E++ + ++ Y+ L
Sbjct: 436 NAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIG 495
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
K A+ L EM++ LRPN Y
Sbjct: 496 FCKAKRMEEARTYLMEMLERRLRPNAHTY 524
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 10/187 (5%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+++ C+ F+ DL EM + G T+++N ++ CK+G+ +A LLEEM+
Sbjct: 734 YNVILNFCCKEEKFEKALDLFQEMLEKGFAS-TVSFNTLIEGYCKSGKLQEANHLLEEMI 792
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+ +TY I ++C+ G A + +M +R + P T+ + + GY
Sbjct: 793 EKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMS 852
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM------MKNGLR---P 469
+ K M Y ++ + + N + A + E+ MK+G R P
Sbjct: 853 EVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLP 912
Query: 470 NVSVYRR 476
SV R
Sbjct: 913 TCSVIAR 919
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 63/154 (40%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
EM G P Y ++ CK G +A + +L R D TY + I R G
Sbjct: 546 EMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNG 605
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
K AF F+++ ++GL P T+ + I G + A + + K + + Y+
Sbjct: 606 KMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYN 665
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+L K AKN+ ++ GL PN Y
Sbjct: 666 ILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTY 699
>gi|297727717|ref|NP_001176222.1| Os10g0495400 [Oryza sativa Japonica Group]
gi|255679525|dbj|BAH94950.1| Os10g0495400, partial [Oryza sativa Japonica Group]
Length = 438
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 90/192 (46%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
++ V Y+ +I +C+ ++L M + G P +TYN +L C +GQ +
Sbjct: 233 RRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKE 292
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A L++M P+ +TY + Y C+ G+ A F+ M KRGL+P +AT+ ++
Sbjct: 293 AIGTLKKMRSDGVEPNVVTYRSLMNYLCKNGRCTEARKIFDSMTKRGLEPDIATYRTLLQ 352
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
GY + + + L + ++++L + K A V S+M ++GL P
Sbjct: 353 GYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNP 412
Query: 470 NVSVYRRVLKHL 481
NV Y V+ L
Sbjct: 413 NVVCYGTVIDVL 424
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 78/187 (41%), Gaps = 3/187 (1%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEM---RQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
IL+K +C + +LL M R G P ++Y V+ K G A E
Sbjct: 170 TILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHE 229
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
ML R P+ +TY I C+ D A N MVK G+ P T+ + + GY +
Sbjct: 230 MLDRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQ 289
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
++A + + + Y L + KN A+ + M K GL P+++ YR
Sbjct: 290 PKEAIGTLKKMRSDGVEPNVVTYRSLMNYLCKNGRCTEARKIFDSMTKRGLEPDIATYRT 349
Query: 477 VLKHLHT 483
+L+ T
Sbjct: 350 LLQGYAT 356
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 85/211 (40%), Gaps = 4/211 (1%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
MA+ + + Y+ILI CR L + + G +T+ +L LC
Sbjct: 83 MARAGADEVTPDLCTYSILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFAPLLKGLCA 142
Query: 344 NGQDADACEL-LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR---GLQP 399
+ + +DA ++ L M +C PD + I + C + A + M G P
Sbjct: 143 DKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSPP 202
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
+ ++ I G+F + AY D+ S + + YS + + K A VL
Sbjct: 203 DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPNVVTYSSIIAALCKAQAMDKAMEVL 262
Query: 460 SEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
+ M+KNG+ P+ Y +L +S Q A
Sbjct: 263 NTMVKNGVMPDCMTYNSILHGYCSSGQPKEA 293
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 8/173 (4%)
Query: 313 KGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML---GRNCHPDAITY 369
+G R +L E+ G ++N L + ++ A A L M PD TY
Sbjct: 40 EGARHVLDELPLRGWGASIYSFNRTLTDVARD-SPAAAVSLFNRMARAGADEVTPDLCTY 98
Query: 370 EIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSAD 429
I I CR G+ D+ F ++K+G + T A +KG R DA V+
Sbjct: 99 SILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFAPLLKGLCADKRTSDAMDIVLRRMT 158
Query: 430 KYKSSSNMLYS--LLASLHDKNNNPVMAK--NVLSEMMKNGLRPNVSVYRRVL 478
+ ++ LL L D+N + + +++++ G P+V Y V+
Sbjct: 159 ELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVI 211
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 88/186 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ +I +C+ ++L M + G P +TYN +L C +GQ +A L+
Sbjct: 236 VVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLK 295
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M P+ +TY + Y C+ G+ A F+ M KRGL+P +AT+ ++GY
Sbjct: 296 KMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKG 355
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ + + L + ++++L + K A V S+M ++GL PNV Y
Sbjct: 356 ALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYG 415
Query: 476 RVLKHL 481
V+ L
Sbjct: 416 TVIDVL 421
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 81/188 (43%), Gaps = 3/188 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEM---RQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
YN L+K +C + +LL M R G P ++YN VL K G A
Sbjct: 166 YNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYH 225
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EML R PD +TY I C+ D A N MVK G+ P T+ + + GY
Sbjct: 226 EMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSG 285
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ ++A + + + YS L + KN A+ + M K GL P+++ YR
Sbjct: 286 QPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYR 345
Query: 476 RVLKHLHT 483
+L+ T
Sbjct: 346 TLLQGYAT 353
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++N +I C+ L M ++G +P +TYN ++ C G+ +A +LL M
Sbjct: 483 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASM 542
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+ PD +TY I CRV + D A F +MV G+ P + T+ ++G F
Sbjct: 543 VSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLF 597
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 80/184 (43%), Gaps = 2/184 (1%)
Query: 299 YNILIKEMCRRCD-FKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
Y LI +C CD + +L++EM G T+ +N ++ CK G+ ++ +L + M
Sbjct: 449 YTSLIHGLCT-CDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLM 507
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
+ PD ITY I C GK D A MV G++P + T+ I GY R
Sbjct: 508 VRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRM 567
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+DA S + + Y+++ AK + + K+G + +S Y +
Sbjct: 568 DDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNII 627
Query: 478 LKHL 481
L L
Sbjct: 628 LHGL 631
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 104/258 (40%), Gaps = 40/258 (15%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPI 330
AL+EM ++L L M + I+ +NILI ++ + +MRQ G P
Sbjct: 356 ALVEMHALLDL--MVRNGIQPDHH---VFNILICAYAKQEKVDQAMLVFSKMRQHGLNPN 410
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA----- 385
+ Y V+ VLCK+G DA E+M+ P+ I Y I C K+D A
Sbjct: 411 VVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELIL 470
Query: 386 -------------FN-----------------FFNQMVKRGLQPRLATHAAFIKGYFIFY 415
FN F+ MV+ G++P + T+ I G +
Sbjct: 471 EMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAG 530
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ ++A K + + Y L + + + + A + EM+ +G+ PN+ Y
Sbjct: 531 KMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYN 590
Query: 476 RVLKHLHTSHQEHMAKCL 493
+L+ L + + AK L
Sbjct: 591 IILQGLFHTRRTAAAKEL 608
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 84/212 (39%), Gaps = 39/212 (18%)
Query: 279 LGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE-MRQVGCEPITLTYNYV 337
LG + V K + L+K +C D+++ M ++GC P +YN +
Sbjct: 110 LGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNL 169
Query: 338 LGVLCKNGQDADACELLEEML---GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
L LC + +A ELL M G PD ++Y + + G D A++ +++M+
Sbjct: 170 LKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLD 229
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM 454
RG+ P + T+++ I A DK
Sbjct: 230 RGILPDVVTYSSIIAAL-----------------------------CKAQAMDK------ 254
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
A VL+ M+KNG+ P+ Y +L +S Q
Sbjct: 255 AMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQ 286
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 84/220 (38%), Gaps = 45/220 (20%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++ C K L +MR G EP +TY+ ++ LCKNG+ +A ++ + M
Sbjct: 274 YNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMT 333
Query: 359 GRNCHPDAITYE-----------------------------------IFIVYSCRVGKFD 383
R PD TY I I + K D
Sbjct: 334 KRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVD 393
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
A F++M + GL P + + I +DA Y D+ + + ++Y+ L
Sbjct: 394 QAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSL- 452
Query: 444 SLH-----DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+H DK + A+ ++ EM+ G+ N + ++
Sbjct: 453 -IHGLCTCDKWDK---AEELILEMLDRGICLNTIFFNSII 488
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 4/119 (3%)
Query: 364 PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY 423
P TY I I CR G+ D+ F +VK+G + T +KG R DA
Sbjct: 90 PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149
Query: 424 VVLSADKYKSSSNMLY--SLLASLHDKNNNPVMAK--NVLSEMMKNGLRPNVSVYRRVL 478
V+ + ++ +LL L D+N + + +++++ G P+V Y VL
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVL 208
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 62/141 (43%), Gaps = 2/141 (1%)
Query: 265 LVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQ 324
L++G + M L L++ + V + YNI+++ + ++L V + +
Sbjct: 557 LINGYCRVSRMDDALALFK--EMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITK 614
Query: 325 VGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
G + TYN +L LCKN +A + + + + + T+ I I + G+ D
Sbjct: 615 SGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDE 674
Query: 385 AFNFFNQMVKRGLQPRLATHA 405
A + F GL P + T++
Sbjct: 675 AKDLFAAHSANGLVPDVRTYS 695
>gi|255661000|gb|ACU25669.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 376
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 91/184 (49%), Gaps = 2/184 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI + F+ + EM V C P +TYN ++ LCKN +A +L++EML
Sbjct: 167 YNTLINGLVGASKFEDAIRVFREMGTVHCSPTIITYNTLINGLCKNEMFGEAYDLVKEML 226
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ +P ITY + + C K + A +NQ++ +G +P + H I G + +
Sbjct: 227 EKGLNPSVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQ 286
Query: 419 DAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
A + +++K + N++ ++ L K+ + A + + +++NGL P++ Y
Sbjct: 287 RALS-LYFXMNRWKCAPNLVTHNTLMEGFYKDGDIRNALVIWARVLRNGLEPDIISYNIT 345
Query: 478 LKHL 481
LK L
Sbjct: 346 LKGL 349
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 91/209 (43%)
Query: 282 YEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+E+ + + + R VS +NI+++ + + M++ ++TY ++
Sbjct: 45 FELWEMMGNEGNRSVSSFNIMMRGLFDXGKVDEVISIWELMKKSDFVEDSITYGILVHGF 104
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
CKNG + +LE + DA Y I C+ D A + N M+K G +P
Sbjct: 105 CKNGXINKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNDMIKSGCKPNA 164
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
+ I G ++EDA + + S + + Y+ L + KN A +++ E
Sbjct: 165 HVYNTLINGLVGASKFEDAIRVFREMGTVHCSPTIITYNTLINGLCKNEMFGEAYDLVKE 224
Query: 462 MMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
M++ GL P+V Y ++K L H+ A
Sbjct: 225 MLEKGLNPSVITYSMLMKGLCLDHKVERA 253
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 59/142 (41%), Gaps = 8/142 (5%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
G CL V +++++ + + K + V +NILI +C + L
Sbjct: 243 GLCLDHKVERALQLWN--------QVISKGFKPDVQMHNILIHGLCSVGKTQRALSLYFX 294
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M + C P +T+N ++ K+G +A + +L PD I+Y I + C +
Sbjct: 295 MNRWKCAPNLVTHNTLMEGFYKDGDIRNALVIWARVLRNGLEPDIISYNITLKGLCSCNR 354
Query: 382 FDVAFNFFNQMVKRGLQPRLAT 403
A F + V++ + P T
Sbjct: 355 ICDAILFLHDSVRKKIVPTKIT 376
>gi|2462828|gb|AAB72163.1| hypothetical protein [Arabidopsis thaliana]
Length = 1152
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 92/191 (48%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
++ YN+ I +C+ + + ++ +VG P +TY V+ +NGQ A L +
Sbjct: 552 LTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYD 611
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EML + +P ITY + I + G+ + AF + +M KRG++P + TH A + G
Sbjct: 612 EMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAG 671
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
++AY+Y+ ++ + Y++L S + + EM+ + P+ +R
Sbjct: 672 NIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHR 731
Query: 476 RVLKHLHTSHQ 486
+ KHL H+
Sbjct: 732 ALFKHLEKDHE 742
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 80/216 (37%), Gaps = 36/216 (16%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C + +G + L EM P +TY ++ KNG + A E+ +EML
Sbjct: 449 YNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEML 508
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV------------------------- 393
+ PD Y V R+G D AF +MV
Sbjct: 509 RKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNL 568
Query: 394 -----------KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
+ GL P T+ I+GY +++ A K S + Y +L
Sbjct: 569 VKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVL 628
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
H K A +EM K G+RPNV + +L
Sbjct: 629 IYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALL 664
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 99/263 (37%), Gaps = 38/263 (14%)
Query: 243 KALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNIL 302
+ + + GI V N + SC +G ++ + EM + I+ +E YNIL
Sbjct: 264 ETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWL----EMKRRNIEFSE---VTYNIL 316
Query: 303 IKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNC 362
I + + R +MR+ G ++N ++ CK G DA + +EML
Sbjct: 317 INGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGI 376
Query: 363 HPDAITYEIFIVYSCRVGKFD--------------VAFN-----------------FFNQ 391
+P TY I+I C G+ D V++N F+
Sbjct: 377 YPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDD 436
Query: 392 MVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNN 451
+ + P + T+ I G E A + + + Y+ L KN N
Sbjct: 437 LRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGN 496
Query: 452 PVMAKNVLSEMMKNGLRPNVSVY 474
MA V EM++ G++P+ Y
Sbjct: 497 LSMATEVYDEMLRKGIKPDGYAY 519
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 85/196 (43%), Gaps = 1/196 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ + F L ++R P +TYN ++ LC++G A L EEM
Sbjct: 414 YNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMT 473
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD ITY + + G +A +++M+++G++P + G +
Sbjct: 474 TQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSD 533
Query: 419 DAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
A++ + + A + + +Y++ K N V A ++ + GL P+ Y V
Sbjct: 534 KAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTV 593
Query: 478 LKHLHTSHQEHMAKCL 493
++ + Q MA+ L
Sbjct: 594 IRGYLENGQFKMARNL 609
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 90/183 (49%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V ++++I +C+ F+ D++ +M+ G P +TYN ++ CK G+ A LL+
Sbjct: 229 VVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLK 288
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM+ + HP+ IT+ I I CR A F +M ++GLQP + T+ + I G
Sbjct: 289 EMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNG 348
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ ++A + + + Y+ L + K A+ +L ++ K GL PNV +
Sbjct: 349 KLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFN 408
Query: 476 RVL 478
++
Sbjct: 409 TLI 411
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 22/257 (8%)
Query: 225 QVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEM 284
V + KA+GF P +I+ + + G C +MF L +
Sbjct: 250 DVVEDMKAWGFSPSVITYNTI--------------IDGYCKAG------KMFKADAL--L 287
Query: 285 AKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKN 344
+ V K+ +NILI CR + + + EM++ G +P +TYN ++ LC N
Sbjct: 288 KEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSN 347
Query: 345 GQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
G+ +A L ++M G P+ +TY I C+ A + + KRGL P + T
Sbjct: 348 GKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITF 407
Query: 405 AAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMK 464
I Y R +DA+ + D + Y+ L + N A+ + EM
Sbjct: 408 NTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEG 467
Query: 465 NGLRPNVSVYRRVLKHL 481
NGL+ ++ Y ++ L
Sbjct: 468 NGLKADLVTYNILVDAL 484
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 104/254 (40%), Gaps = 29/254 (11%)
Query: 232 AFGFLPVLISSKALT-----KKGIWRVVEVLNQVGGSCLVSGV---RALIEMFSVLGLYE 283
G P +++ AL KK + E+L+ +G L V LI+ + G +
Sbjct: 362 GMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMD 421
Query: 284 MA---KYVIKKTE--RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
A + ++ T VS YN LI CR + K R L EM G + +TYN ++
Sbjct: 422 DAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILV 481
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
LCK G+ A LL+EM +P +TY I R G A N M K+G +
Sbjct: 482 DALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRR 541
Query: 399 PRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNV 458
+ T+ IKG+ + E+A + + +K + Y +L
Sbjct: 542 ANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILR--------------- 586
Query: 459 LSEMMKNGLRPNVS 472
EMM+ G P++
Sbjct: 587 -DEMMEKGFIPDID 599
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 79/176 (44%)
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN 390
L+ N +L L K G+ + +EM+ R + +T+++ I C+VGKF A +
Sbjct: 194 ALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVE 253
Query: 391 QMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNN 450
M G P + T+ I GY + A + K + + +++L ++
Sbjct: 254 DMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDE 313
Query: 451 NPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
N AK V EM + GL+PNV Y ++ L ++ + A L + S + L +V
Sbjct: 314 NVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNV 369
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 105/248 (42%), Gaps = 20/248 (8%)
Query: 249 GIWRVVEV---------LNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTER----- 294
G RV EV + Q G + V LI +FS G + A +++ +
Sbjct: 271 GFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVP 330
Query: 295 KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
Y ++I CR + EM +GC P +TYN +L LCK + DA ELL
Sbjct: 331 DGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELL 390
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
EM R PD T+ I CR G F+ A F+ ++ + L+P + + + I G
Sbjct: 391 NEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDG---M 447
Query: 415 YRYEDAYKYVVLSADKYKSS---SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
R D K L D + +++ YS+L H + A L EM+ G PN+
Sbjct: 448 CRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNI 507
Query: 472 SVYRRVLK 479
Y ++K
Sbjct: 508 MTYNSIIK 515
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ LI CR +F+ L + P + YN ++ +C+ G A A EL ++M
Sbjct: 405 FTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMH 464
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R P+ +TY I I C G+ + AF F ++MV +G P + T+ + IKGY +
Sbjct: 465 AREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVK 524
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+++ + ++ L + K N A NV + M K ++P+ Y ++
Sbjct: 525 KGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMII 584
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 76/179 (42%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI MCR+ D +L +M P +TY+ ++ C+ GQ +A L+
Sbjct: 437 VVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLD 496
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM+ + P+ +TY I CR G F +M++ + P L T I GY
Sbjct: 497 EMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEE 556
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
A+ + + + Y+++ + + N A V +M +G+ P+ Y
Sbjct: 557 NMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTY 615
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 94/210 (44%), Gaps = 5/210 (2%)
Query: 282 YEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNY 336
++ A VI + E++ V +N+LI R D L+ M G +P +T+N
Sbjct: 173 FDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNS 232
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
VL LCK+ + A E+ M + PD ++ I I CRVG+ + A F+ +M +RG
Sbjct: 233 VLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRG 292
Query: 397 LQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAK 456
+ P + + + I + + + A Y+ ++Y+++ + + A
Sbjct: 293 VTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEAL 352
Query: 457 NVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
V EM+ G P+V Y +L L H+
Sbjct: 353 RVRDEMVGLGCLPDVVTYNTLLNGLCKQHR 382
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 91/207 (43%), Gaps = 9/207 (4%)
Query: 282 YEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNY 336
++ AK V + ++ V +NILI CR + + EM+Q G P ++++
Sbjct: 243 FDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSC 302
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
++G+ G+ A L EM G PD + Y + I CR G A ++MV G
Sbjct: 303 LIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLG 362
Query: 397 LQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHD--KNNNPVM 454
P + T+ + G +R DA + +L+ K + + L + +H ++ N
Sbjct: 363 CLPDVVTYNTLLNGLCKQHRLLDAEE--LLNEMKERGVTPDLCTFTTLIHGYCRDGNFEK 420
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A + ++ LRP+V Y ++ +
Sbjct: 421 ALQLFDTLLHQRLRPDVVAYNSLIDGM 447
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 54/124 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +IK CR + K + L +M Q P +T+N ++ K A + M
Sbjct: 510 YNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIME 569
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PDA+TY + I G + A F +M G++P T+ + I G+ +
Sbjct: 570 KEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSK 629
Query: 419 DAYK 422
+A++
Sbjct: 630 EAFQ 633
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 78/216 (36%), Gaps = 30/216 (13%)
Query: 201 VIDNCGRLDDYETMRQLLNDFNVYQVCLN-----------------EKAFGFLPVLISSK 243
+ID R D +L +D + ++ N E+AFGFL ++S
Sbjct: 443 LIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKG 502
Query: 244 ALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILI 303
L + + + G C V+ G + K + + +N LI
Sbjct: 503 NLPNIMTYNSI-----IKGYCRSGNVKK--------GQQFLQKMMQDNILPDLITFNTLI 549
Query: 304 KEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH 363
+ + G ++ M + +P +TYN ++ + G +A + ++M
Sbjct: 550 HGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIE 609
Query: 364 PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
PD TY I G AF ++M+ RG P
Sbjct: 610 PDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAP 645
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 91/183 (49%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN +I C R +G R + M+ G +P + TY + +CK G+ +A +LE
Sbjct: 226 VVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLE 285
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M P A+TY I C G ++AF++ ++MV+ GL P ++T+ I F+
Sbjct: 286 KMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDC 345
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ ++A + ++K ++ Y++L + + + N A + EM+ G++P Y
Sbjct: 346 KMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYT 405
Query: 476 RVL 478
++
Sbjct: 406 SLI 408
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 111/257 (43%), Gaps = 9/257 (3%)
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMA-----KYVIKKTERKVSYYNILIKEMC 307
++E + ++G LI+ + G EMA K V + VS YN+LI +
Sbjct: 283 MLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALF 342
Query: 308 RRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAI 367
C ++ EM + G P ++TYN ++ C+ G A L +EM+ + P +
Sbjct: 343 LDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRV 402
Query: 368 TYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLS 427
TY I + G+ A + F ++V++G+ P L A I G+ + A+ ++
Sbjct: 403 TYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFA-MLKE 461
Query: 428 ADKYKSSSN-MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
D+ K + + ++ L + A+ ++ EM G++P+ Y ++ S +
Sbjct: 462 MDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGY--SKR 519
Query: 487 EHMAKCLSSRYSSLSLG 503
M R LS+G
Sbjct: 520 GDMKDAFRVRDEMLSIG 536
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 78/176 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI + +R K DL ++ + G P + +N ++ C NG A +L+EM
Sbjct: 404 YTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMD 463
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD +T+ + CR GK + A +M RG++P ++ I GY +
Sbjct: 464 QMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMK 523
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
DA++ + + + Y+ L KN A+ +L EM+ G+ PN + Y
Sbjct: 524 DAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTY 579
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 5/145 (3%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERKVSY-----YNILIKEMCRRCDFKGPRDLLVEMRQV 325
+LI + S G + A + +K RK + +N LI C + +L EM Q+
Sbjct: 406 SLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQM 465
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
P +T+N ++ C+ G+ A EL+EEM R PD I+Y I + G A
Sbjct: 466 KVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDA 525
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKG 410
F ++M+ G P L T+ A I+G
Sbjct: 526 FRVRDEMLSIGFNPTLLTYNALIQG 550
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 57/112 (50%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N L++ CR + R+L+ EM+ G +P ++YN ++ K G DA + +EML
Sbjct: 474 FNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEML 533
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+P +TY I C+ + D A +M+ +G+ P T+ + I+G
Sbjct: 534 SIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEG 585
>gi|449469288|ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 155/384 (40%), Gaps = 25/384 (6%)
Query: 115 RCISSFAMVNGPYATPK------QVSEIIELLRSGDSETESKLLSMSVSLSNASVIEILR 168
R +SFA + P ++S I+ R+ + E L S S ++S V ++L+
Sbjct: 30 RSFTSFATEARAGSDPTLPFLVSEISRILSDRRNPHHDLEVGLSSFSSNVSTDLVEQVLK 89
Query: 169 VLNSEKVSALCFLKYMREIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDF-NVYQVC 227
+ SA F + + I P F + D +V+D G + + L +
Sbjct: 90 RCKNIAFSAHRFFLWAKRI-PGFEPSDDSYHIVVDILGSSGQFAILWDFLIEIRETRSSV 148
Query: 228 LNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVL-------- 279
+ + F + S L + I N++G + +GV L ++ L
Sbjct: 149 ITHELFWHVFTAYSRADLPQDAI----RAFNRMGEFGIRAGVDDLDKLLYTLCKRKHVAH 204
Query: 280 --GLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYV 337
++ K V + V Y+IL + D + + EMR+ GC L YN +
Sbjct: 205 AQQFFDKVKSVFNPS---VKTYSILTRGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSL 261
Query: 338 LGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
L LCK G+ +A ++ EM PDA TY IFI SC+ + + ++ L
Sbjct: 262 LEALCKGGKRDEAYKMFLEMDSNGVDPDADTYSIFIRSSCQENDLHTVYRVLERTKRKNL 321
Query: 398 QPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKN 457
P + T+ IK E+AY+ + ++ + Y+ + + H ++ A N
Sbjct: 322 LPNVFTYNCVIKKLCKDQNVEEAYQILDEMIERGVTPDTWSYNAIQAYHCDHSEVNSALN 381
Query: 458 VLSEMMKNGLRPNVSVYRRVLKHL 481
++ M ++ P+ Y VLK L
Sbjct: 382 LVKRMDRDKCVPDKHTYNMVLKLL 405
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 23/219 (10%)
Query: 288 VIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLC 342
V+++T+RK V YN +IK++C+ + + +L EM + G P T +YN + C
Sbjct: 312 VLERTKRKNLLPNVFTYNCVIKKLCKDQNVEEAYQILDEMIERGVTPDTWSYNAIQAYHC 371
Query: 343 KNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLA 402
+ + A L++ M C PD TY + + RVG+FD A + M KRG P ++
Sbjct: 372 DHSEVNSALNLVKRMDRDKCVPDKHTYNMVLKLLVRVGRFDRANEVWESMGKRGFYPSVS 431
Query: 403 THAAFIKGY-FIFYRYEDAYKYVVLSADK----YKSSSNMLYSLLASLHDKNNNPVMAKN 457
T+A I G+ ++ E+A KY + D+ Y ++ +L L + K+ ++
Sbjct: 432 TYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYIATVELLRDRLLGIGFKDQVAILGDK 491
Query: 458 V----------LSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
+ L+ +M G R + +LK+ T H+
Sbjct: 492 MKRSTSCSIQELANLMSGGKRREA---QSMLKNEETEHE 527
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 90/185 (48%), Gaps = 7/185 (3%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+IL +C+R +L+ EM GC P +TYN ++ LCK + A ELLE
Sbjct: 115 VVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLE 174
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
++ PD +TY I + C+ G+ D A M+KRG P + T+ A ++G
Sbjct: 175 TLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTG 234
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLR--PNVSV 473
R ++A+ K ++ + Y L + + K++ A+ V+ +G+R P + V
Sbjct: 235 RVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVV-----DGIRGTPYIDV 289
Query: 474 YRRVL 478
Y ++
Sbjct: 290 YNALM 294
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 87/193 (45%), Gaps = 4/193 (2%)
Query: 293 ERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
ERKV+ YNILI +C+ ++L EM G P T+T+N ++ LCK G+
Sbjct: 3 ERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFE 62
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
A LL M RNC P TY I C+ D A ++ V G P + T++
Sbjct: 63 RAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILA 122
Query: 409 KGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLR 468
G R ++A++ V + + + + Y+ L K + A +L ++ +G
Sbjct: 123 DGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFV 182
Query: 469 PNVSVYRRVLKHL 481
P+V Y ++ L
Sbjct: 183 PDVVTYTIIVDGL 195
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 76/171 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ YN L+ C+ ++ +M GC P TYN V+ LCK+G+ +A LE
Sbjct: 287 IDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLE 346
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M C PD ++Y I I + K A +QM++ G+ P T+ + +
Sbjct: 347 SMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEE 406
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNG 466
R++DA + N+ Y+ L S + N A ++ EM++NG
Sbjct: 407 RFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNG 457
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 61/126 (48%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C++ + + L+ E G P +TY+ + LCK G+ +A EL++EM
Sbjct: 83 YNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMS 142
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
G C P+ +TY I C+ K + A+ +V G P + T+ + G R +
Sbjct: 143 GNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLD 202
Query: 419 DAYKYV 424
A K V
Sbjct: 203 KALKMV 208
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 116/281 (41%), Gaps = 27/281 (9%)
Query: 229 NEKAFGFLPVLISS-------------KALTKKG----IWRVVEVLNQVGGSCLVSGVRA 271
EKA+ L L+SS L K+G ++VE + + G + V A
Sbjct: 166 TEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTA 225
Query: 272 LIEMFSVLGLYEMAKYVIKK------TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
L+E G + A ++ K+ T ++Y + L+ C+ K + ++ +R
Sbjct: 226 LMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVS-LVNGYCKSSRTKEAQKVVDGIRGT 284
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
P YN ++ CK G+ + + E+M R C P+ TY I + C+ GK D A
Sbjct: 285 ---PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEA 341
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
F F M G P + ++ I G F + ++A + + + Y+ L +
Sbjct: 342 FPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQ 401
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
K A +L M+K G+ P+ Y ++ L +++
Sbjct: 402 FCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNR 442
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 2/117 (1%)
Query: 295 KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPIT-LTYNYVLGVLCKNGQDADACEL 353
+VSY ++I +C+ L EM V IT T+N ++ K + +A L
Sbjct: 530 EVSYTTVIIG-LCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTL 588
Query: 354 LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
LE M+ R C P ITY + I C++ K D A+ F++M RG+ ++ I G
Sbjct: 589 LELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYG 645
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ + C+ F +L M + G +P +TYN ++ L + + DA EL+ EML
Sbjct: 395 YNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEML 454
Query: 359 GRNCHPDA-ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
C A TY I C+ G A + M G++ T+ FI
Sbjct: 455 RNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFI 505
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 81/185 (43%), Gaps = 5/185 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCE-PITLTYNYVLGVLCKNGQDADACELLEEM 357
YN LI + + +L+ EM + GC TYN ++ LCK G A L++ M
Sbjct: 430 YNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHM 489
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
G + +TY IFI C+ G+ D A + ++M L+ + ++ I G +
Sbjct: 490 TGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM--DTLRDEV-SYTTVIIGLCKAEQL 546
Query: 418 EDAYKYV-VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
+ A K + A K ++ ++LL K A +L M++ G P+V Y
Sbjct: 547 DRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNM 606
Query: 477 VLKHL 481
V+ L
Sbjct: 607 VITCL 611
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N+LI + LL M Q GC P +TYN V+ LCK + A EL +EM
Sbjct: 569 FNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMA 628
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
R +++Y + I C G+ A +M
Sbjct: 629 VRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEM 662
>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
Length = 694
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 14/231 (6%)
Query: 257 LNQVGGSCLVSGVRALIEMFSVLGL-YEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGP 315
L+ S +V G+ + LG+ ++M KY E N LI R +
Sbjct: 427 LDAFAYSSIVDGLSKQGRVDEALGIVHQMDKY---GCELSPHVCNPLINGFVRASKLEEA 483
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
EM GC P ++YN ++ LCK + +DA ++EML ++ PD ITY + +
Sbjct: 484 ICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDG 543
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
C+ K D+A N + Q++ +GL+P + H + G + EDA ++L ++ S
Sbjct: 544 LCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDA---LLLYSN--MKQS 598
Query: 436 NMLYSLLA--SLHD---KNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
N L +L+ +L D K MA + + M KNG +P++ Y LK L
Sbjct: 599 NCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGL 649
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 65/129 (50%), Gaps = 1/129 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCE-PITLTYNYVLGVLCKNGQDADACELLEEM 357
YNI+I +R D+ +++ + + C P +TYN ++ LCK G+ ++ E+ E M
Sbjct: 222 YNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERM 281
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
C D TY I C VG D A + +MVKR + + T+ A + G+ +
Sbjct: 282 KKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKI 341
Query: 418 EDAYKYVVL 426
+++++ V+
Sbjct: 342 KESFELWVM 350
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 101/237 (42%), Gaps = 10/237 (4%)
Query: 254 VEVLNQVGGSCLVSGV---RALIEMFSVLGLYEMAKYVIKKTER------KVSYYNILIK 304
+EV +++ LV V +I+ F G Y K + ++ + V YN++I
Sbjct: 204 LEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMIN 263
Query: 305 EMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHP 364
+C+ F ++ M++ CE TY+ ++ LC G A E+ +EM+ R+
Sbjct: 264 GLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVV 323
Query: 365 DAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV 424
D +TY + CR GK +F + M K + ++ FI+G F + E+A
Sbjct: 324 DVVTYNALLNGFCRAGKIKESFELWVMMGKENCH-NVVSYNIFIRGLFENRKVEEAISVW 382
Query: 425 VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
L + + + Y +L KN + A +L E G + + Y ++ L
Sbjct: 383 ELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGL 439
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 96/255 (37%), Gaps = 44/255 (17%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
G C ++ E++ ++G K+ V YNI I+ + + +
Sbjct: 334 GFCRAGKIKESFELWVMMG---------KENCHNVVSYNIFIRGLFENRKVEEAISVWEL 384
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFI-------- 373
+R+ G + TY ++ LCKNG A ++L+E DA Y +
Sbjct: 385 LRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGR 444
Query: 374 ------------VYSC---------------RVGKFDVAFNFFNQMVKRGLQPRLATHAA 406
Y C R K + A FF +M +G P + ++
Sbjct: 445 VDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNT 504
Query: 407 FIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNG 466
I G R+ DAY +V +K + YSLL + MA N+ +++ G
Sbjct: 505 LINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKG 564
Query: 467 LRPNVSVYRRVLKHL 481
L P+V+++ ++ L
Sbjct: 565 LEPDVTMHNILMHGL 579
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 48/114 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ + L VG P TYN ++ + K Q +A LL+ M
Sbjct: 117 YNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMW 176
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
++ PD +Y I + G A F++M +RGL P + + I G+F
Sbjct: 177 SKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFF 230
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 1/123 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNILIK ++ F + LL M +P +Y V+ + K+G A E+ +EM
Sbjct: 152 YNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMF 211
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG-LQPRLATHAAFIKGYFIFYRY 417
R PD + Y I I + G + + ++VK + P + T+ I G R+
Sbjct: 212 ERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRF 271
Query: 418 EDA 420
+++
Sbjct: 272 DES 274
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 53/125 (42%)
Query: 286 KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNG 345
+ ++K E V+ +NIL+ +C + L M+Q C P +T+N ++ L K
Sbjct: 559 QVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKAR 618
Query: 346 QDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
+ A + M PD I+Y I + C G+ F+ +K G+ P T
Sbjct: 619 ECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWY 678
Query: 406 AFIKG 410
++
Sbjct: 679 ILVRA 683
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
++ V Y+ +I +C+ ++L M + G P +TYN +L C + Q +
Sbjct: 225 RRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKE 284
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A L++M PD +TY + Y C+ G+ A F+ M KRGL+P +AT+ ++
Sbjct: 285 AIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQ 344
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
GY + + + L + ++++L + K A V S+M ++GL P
Sbjct: 345 GYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNP 404
Query: 470 NVSVYRRVL 478
NV Y V+
Sbjct: 405 NVVTYGAVI 413
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 108/258 (41%), Gaps = 40/258 (15%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPI 330
AL+EM ++L L M + I +NILI ++ + +MRQ G P
Sbjct: 351 ALVEMHALLDL--MVRNGIHPDHH---VFNILICAYAKQEKVDEAMLVFSKMRQHGLNPN 405
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA----- 385
+TY V+G+LCK+G DA E+M+ P+ I Y I C K+D A
Sbjct: 406 VVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELIL 465
Query: 386 -------------FN-----------------FFNQMVKRGLQPRLATHAAFIKGYFIFY 415
FN F+ MV+ G++P + T++ I GY +
Sbjct: 466 EMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAG 525
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ ++A K + + Y+ L + + + + A + EM+ +G+ PN+ Y
Sbjct: 526 KMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYN 585
Query: 476 RVLKHLHTSHQEHMAKCL 493
+L+ L + + AK L
Sbjct: 586 IILQGLFHTRRTAAAKEL 603
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 76/187 (40%), Gaps = 3/187 (1%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEM---RQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
IL+K +C + +LL M R G P ++Y V+ K G A E
Sbjct: 162 TILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHE 221
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
ML R PD +TY I C+ D A MVK G+ P T+ + + GY +
Sbjct: 222 MLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQ 281
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
++A ++ + Y+ L KN A+ + M K GL P+++ Y
Sbjct: 282 PKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCT 341
Query: 477 VLKHLHT 483
+L+ T
Sbjct: 342 LLQGYAT 348
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 93/242 (38%), Gaps = 36/242 (14%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V YN L+ +C+ R + M + G EP TY +L G +
Sbjct: 298 EPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHA 357
Query: 353 LLEEMLGRNCHPD-----------------------------------AITYEIFIVYSC 377
LL+ M+ HPD +TY I C
Sbjct: 358 LLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILC 417
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ G D A +F QM+ GL P + + + I IF +++ A + ++ D+ + +
Sbjct: 418 KSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTI 477
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK-HLHTSHQEHMAKCLSSR 496
++ + H K + ++ + M++ G++PNV Y ++ + + K LSS
Sbjct: 478 FFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSM 537
Query: 497 YS 498
+S
Sbjct: 538 FS 539
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 77/183 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI +C + +L++EM G T+ +N ++ CK G+ ++ +L + M+
Sbjct: 444 YTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMV 503
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ ITY I C GK D A + M G++P T+ I GY R +
Sbjct: 504 RIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMD 563
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA S + + Y+++ AK + + K+G + +S Y +L
Sbjct: 564 DALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIIL 623
Query: 479 KHL 481
L
Sbjct: 624 HGL 626
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 87/207 (42%), Gaps = 4/207 (1%)
Query: 279 LGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE-MRQVGCEPITLTYNYV 337
LG + V K + + L+K +C D+++ M ++ C P + +
Sbjct: 105 LGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTIL 164
Query: 338 LGVLCKNGQDADACELLEEML---GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
L LC + +A ELL M G PD ++Y I + G D A++ +++M+
Sbjct: 165 LKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLD 224
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM 454
R + P + T+++ I + A + + + M Y+ + + + P
Sbjct: 225 RRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKE 284
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A L +M +G+ P+V Y ++ +L
Sbjct: 285 AIGFLKKMRSDGVEPDVVTYNSLMDYL 311
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 82/207 (39%), Gaps = 4/207 (1%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
MA+ K V Y ILI CR L + + G +T+ +L LC
Sbjct: 75 MARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCA 134
Query: 344 NGQDADACEL-LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR---GLQP 399
+ + +DA ++ L M +C PD + I + C + A + M G P
Sbjct: 135 DKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAP 194
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
+ ++ I G+F + AY D+ S + YS + + K A VL
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVL 254
Query: 460 SEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
+ M+KNG+ PN Y +L +S Q
Sbjct: 255 TTMVKNGVMPNCMTYNSILHGYCSSEQ 281
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 48/106 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNI+++ + ++L V + + G + TYN +L LCKN +A + + +
Sbjct: 584 YNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 643
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
+ + T+ I I +VG+ D A + F GL P T+
Sbjct: 644 LTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTY 689
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
++ V Y+ +I +C+ ++L M + G P +TYN +L C + Q +
Sbjct: 225 RRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKE 284
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A L++M PD +TY + Y C+ G+ A F+ M KRGL+P +AT+ ++
Sbjct: 285 AIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQ 344
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
GY + + + L + ++++L + K A V S+M ++GL P
Sbjct: 345 GYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNP 404
Query: 470 NVSVYRRVL 478
NV Y V+
Sbjct: 405 NVVTYGAVI 413
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 108/258 (41%), Gaps = 40/258 (15%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPI 330
AL+EM ++L L M + I +NILI ++ + +MRQ G P
Sbjct: 351 ALVEMHALLDL--MVRNGIHPDHH---VFNILICAYAKQEKVDEAMLVFSKMRQHGLNPN 405
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA----- 385
+TY V+G+LCK+G DA E+M+ P+ I Y I C K+D A
Sbjct: 406 VVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELIL 465
Query: 386 -------------FN-----------------FFNQMVKRGLQPRLATHAAFIKGYFIFY 415
FN F+ MV+ G++P + T++ I GY +
Sbjct: 466 EMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAG 525
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ ++A K + + Y+ L + + + + A + EM+ +G+ PN+ Y
Sbjct: 526 KMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYN 585
Query: 476 RVLKHLHTSHQEHMAKCL 493
+L+ L + + AK L
Sbjct: 586 IILQGLFHTRRTAAAKEL 603
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 76/187 (40%), Gaps = 3/187 (1%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEM---RQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
IL+K +C + +LL M R G P ++Y V+ K G A E
Sbjct: 162 TILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHE 221
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
ML R PD +TY I C+ D A MVK G+ P T+ + + GY +
Sbjct: 222 MLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQ 281
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
++A ++ + Y+ L KN A+ + M K GL P+++ Y
Sbjct: 282 PKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCT 341
Query: 477 VLKHLHT 483
+L+ T
Sbjct: 342 LLQGYAT 348
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 93/242 (38%), Gaps = 36/242 (14%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V YN L+ +C+ R + M + G EP TY +L G +
Sbjct: 298 EPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHA 357
Query: 353 LLEEMLGRNCHPD-----------------------------------AITYEIFIVYSC 377
LL+ M+ HPD +TY I C
Sbjct: 358 LLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILC 417
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ G D A +F QM+ GL P + + + I IF +++ A + ++ D+ + +
Sbjct: 418 KSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTI 477
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK-HLHTSHQEHMAKCLSSR 496
++ + H K + ++ + M++ G++PNV Y ++ + + K LSS
Sbjct: 478 FFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSM 537
Query: 497 YS 498
+S
Sbjct: 538 FS 539
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 77/183 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI +C + +L++EM G T+ +N ++ CK G+ ++ +L + M+
Sbjct: 444 YTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMV 503
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ ITY I C GK D A + M G++P T+ I GY R +
Sbjct: 504 RIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMD 563
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA S + + Y+++ AK + + K+G + +S Y +L
Sbjct: 564 DALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIIL 623
Query: 479 KHL 481
L
Sbjct: 624 HGL 626
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 87/207 (42%), Gaps = 4/207 (1%)
Query: 279 LGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE-MRQVGCEPITLTYNYV 337
LG + V K + + L+K +C D+++ M ++ C P + +
Sbjct: 105 LGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTIL 164
Query: 338 LGVLCKNGQDADACELLEEML---GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
L LC + +A ELL M G PD ++Y I + G D A++ +++M+
Sbjct: 165 LKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLD 224
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM 454
R + P + T+++ I + A + + + M Y+ + + + P
Sbjct: 225 RRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKE 284
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A L +M +G+ P+V Y ++ +L
Sbjct: 285 AIGFLKKMRSDGVEPDVVTYNSLMDYL 311
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 82/207 (39%), Gaps = 4/207 (1%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
MA+ K V Y ILI CR L + + G +T+ +L LC
Sbjct: 75 MARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCA 134
Query: 344 NGQDADACEL-LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR---GLQP 399
+ + +DA ++ L M +C PD + I + C + A + M G P
Sbjct: 135 DKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAP 194
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
+ ++ I G+F + AY D+ S + YS + + K A VL
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVL 254
Query: 460 SEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
+ M+KNG+ PN Y +L +S Q
Sbjct: 255 TTMVKNGVMPNCMTYNSILHGYCSSEQ 281
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 51/107 (47%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNI+++ + ++L V + + G + TYN +L LCKN +A + + +
Sbjct: 584 YNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 643
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
+ + T+ I I +VG+ D A + F + GL P + T++
Sbjct: 644 LTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYS 690
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 66/184 (35%), Gaps = 2/184 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI CR L EM G P +TYN +L L + A A EL +
Sbjct: 549 YNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGIT 608
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ TY I + C+ D A F + LQ T I R +
Sbjct: 609 KSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRND 668
Query: 419 DAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+A + LSA+ YSL+A + ++ M +NG N + +
Sbjct: 669 EAKDLFAALSANGLVPDVRT-YSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSI 727
Query: 478 LKHL 481
++ L
Sbjct: 728 VRKL 731
>gi|308081764|ref|NP_001183223.1| uncharacterized protein LOC100501610 [Zea mays]
gi|238010158|gb|ACR36114.1| unknown [Zea mays]
Length = 289
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 87/194 (44%), Gaps = 3/194 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNI++K +C R F G R +L EM G P +T+N ++G C+ G+ A A L++EM
Sbjct: 17 YNIILKGVCHRDGFSGARVVLDEMLARGVRPTVVTFNTLVGSACREGELAAAERLVDEMT 76
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R P+A+TY + + C G++D A M R QP +A + +
Sbjct: 77 RRGVAPNAVTYALLMQGLCDAGRYDDAKKLLFDMEYRDCQPDVANYGVLMSACAACGD-A 135
Query: 419 DAYKYVV--LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
D K ++ + K K L+ L D + ++ +K+G P+ + YR
Sbjct: 136 DGVKGLISDMRKRKMKPDDASYNVLIRCLCDAGRVDEAHRALVEMQLKDGTAPSAATYRV 195
Query: 477 VLKHLHTSHQEHMA 490
+L + H+
Sbjct: 196 LLDGCCEARDFHLG 209
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 78/164 (47%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
+L E ++G ++YN +L +C + A +L+EML R P +T+ + +C
Sbjct: 1 MLPEAPKLGVRTNAVSYNIILKGVCHRDGFSGARVVLDEMLARGVRPTVVTFNTLVGSAC 60
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
R G+ A ++M +RG+ P T+A ++G RY+DA K + +
Sbjct: 61 REGELAAAERLVDEMTRRGVAPNAVTYALLMQGLCDAGRYDDAKKLLFDMEYRDCQPDVA 120
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y +L S + K ++S+M K ++P+ + Y +++ L
Sbjct: 121 NYGVLMSACAACGDADGVKGLISDMRKRKMKPDDASYNVLIRCL 164
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 8/132 (6%)
Query: 272 LIEMFSVLGLYEMAKYVI-----KKTERKVSYYNILIKEMCRRC-DFKGPRDLLVEMRQV 325
L++ G Y+ AK ++ + + V+ Y +L+ C C D G + L+ +MR+
Sbjct: 90 LMQGLCDAGRYDDAKKLLFDMEYRDCQPDVANYGVLMSA-CAACGDADGVKGLISDMRKR 148
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEM-LGRNCHPDAITYEIFIVYSCRVGKFDV 384
+P +YN ++ LC G+ +A L EM L P A TY + + C F +
Sbjct: 149 KMKPDDASYNVLIRCLCDAGRVDEAHRALVEMQLKDGTAPSAATYRVLLDGCCEARDFHL 208
Query: 385 AFNFFNQMVKRG 396
FN M+ G
Sbjct: 209 GLRVFNAMLASG 220
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 101/221 (45%), Gaps = 1/221 (0%)
Query: 258 NQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRD 317
NQ+ +V G+ + + S L L + V + + V Y+ +I + + ++
Sbjct: 211 NQITYGTIVDGMCKMGDTVSALNLLRKMEEV-SRIKPNVVIYSAIIDGLWKDGRQTDAQN 269
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L EM++ G P TYN ++ C +G+ ++A LL EM R PD +T+ + I
Sbjct: 270 LFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALV 329
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ GKF A +N+M+ RG+ P T+ + I G+ R + A + L A K S +
Sbjct: 330 KEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVI 389
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+S+L + +L EM + GL N Y ++
Sbjct: 390 TFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLI 430
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEM---AKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDL 318
G C ++ +EMF V+ +M A + E V YNILI + F +L
Sbjct: 467 GLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEEL 526
Query: 319 LVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCR 378
EM G P T+TYN V+ LCK + +A ++ + M + PD +T+ I C+
Sbjct: 527 YEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCK 586
Query: 379 VGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
VG+ F +M +RG+ T+ I G+
Sbjct: 587 VGRVGDGLEVFCEMGRRGIVANAITYRTLIHGF 619
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 77/191 (40%), Gaps = 11/191 (5%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI C+ + DLL EM G P +T N +L LC NG+ DA E+ + M
Sbjct: 426 YTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQ 485
Query: 359 G-----------RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAF 407
+ PD TY I I GKF A + +M RGL P T+ +
Sbjct: 486 KSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSV 545
Query: 408 IKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
I G R ++A + K S + ++ L + + K V EM + G+
Sbjct: 546 IDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGI 605
Query: 468 RPNVSVYRRVL 478
N YR ++
Sbjct: 606 VANAITYRTLI 616
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 1/184 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V + L+ +CR LL M + G +P +TY ++ +CK G A LL
Sbjct: 177 VIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLR 236
Query: 356 EMLG-RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
+M P+ + Y I + G+ A N F++M ++G+ P L T+ I G+
Sbjct: 237 KMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSS 296
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
R+ +A + + ++ S + +S+L + K A+ + +EM+ G+ PN Y
Sbjct: 297 GRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITY 356
Query: 475 RRVL 478
++
Sbjct: 357 NSMI 360
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 5/145 (3%)
Query: 272 LIEMFSVLGLYEMAKYVIKKT-ERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
+I F G + A+ ++++ ERK+S +++LI + + F +L EM G
Sbjct: 289 MINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRG 348
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
P T+TYN ++ K + A + M + C PD IT+ I I C + D
Sbjct: 349 IIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGM 408
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGY 411
++M +RGL T+ I G+
Sbjct: 409 KLLHEMSRRGLVANTITYTTLIHGF 433
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 72/157 (45%), Gaps = 3/157 (1%)
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
C+P + + ++ LC+ G+ +A LL+ M+ P+ ITY + C++G A
Sbjct: 173 CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL 232
Query: 387 NFFNQM--VKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLAS 444
N +M V R ++P + ++A I G + R DA +K S + Y+ + +
Sbjct: 233 NLLRKMEEVSR-IKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMIN 291
Query: 445 LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ A+ +L EM + + P+V + ++ L
Sbjct: 292 GFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINAL 328
>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
Length = 1274
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 95/207 (45%), Gaps = 5/207 (2%)
Query: 266 VSGVRALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLV 320
V+ LI + G +E + Y+++K E+ + YN ++ C++ FK +LL
Sbjct: 193 VATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLD 252
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
M+ G + TYN ++ LC++ + A LL +M R HP+ +TY I G
Sbjct: 253 HMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEG 312
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
K +A N+M+ GL P T A I G+ +++A K + K + S + Y
Sbjct: 313 KVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYG 372
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGL 467
+L KN +A+ M +NG+
Sbjct: 373 VLLDGLCKNAEFDLARGFYMRMKRNGV 399
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 82/184 (44%), Gaps = 4/184 (2%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
S Y+ILI+ R + ++ M G P T N +LG + K+G+D L+E
Sbjct: 124 SVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKE 183
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
ML R PD T+ I I C G F+ + +M K G P + T+ + Y R
Sbjct: 184 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 243
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKN--VLSEMMKNGLRPNVSVY 474
++ A + + K + Y++L +HD + +AK +L +M K + PN Y
Sbjct: 244 FKAAIELLDHMKSKGVDADVCTYNML--IHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 301
Query: 475 RRVL 478
++
Sbjct: 302 NTLI 305
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 99/240 (41%), Gaps = 22/240 (9%)
Query: 258 NQVGGSCLVSGVRALIEMFSVLGLY-EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPR 316
N V CL++G E ++ EM K T Y L+K +C+ +
Sbjct: 542 NTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPT---FFTYGSLLKGLCKGGHLREAE 598
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
L + V T+ YN +L +CK+G A A L EM+ R+ PD+ TY I
Sbjct: 599 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 658
Query: 377 CRVGKFDVAFNFFNQMVKRG-LQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
CR GK +A F + RG + P + F+ G F +++ A Y D +
Sbjct: 659 CRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWK-AGIYFREQMDNLGHTP 717
Query: 436 NML--------YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQE 487
+++ YS + + N ++L EM PN++ Y +L H ++ ++
Sbjct: 718 DIVTTNAMIDGYSRMGKIEKTN-------DLLPEMGNQNGGPNLTTY-NILLHGYSKRKD 769
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 53/110 (48%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +L+ +C+ +F R + M++ G +TY ++ LCKNG +A LL EM
Sbjct: 371 YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMS 430
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
PD +TY I C+VG+F A ++ + GL P ++ I
Sbjct: 431 KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 480
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 5/216 (2%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI F +G ++ AK ++ + R Y+ LI CR K + M
Sbjct: 443 ALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILE 502
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G T+N ++ LCK G+ A+A E + M P+ ++++ I G+ A
Sbjct: 503 GHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKA 562
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
F+ F++M K G P T+ + +KG +A K++ + ++Y+ L +
Sbjct: 563 FSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTA 622
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K+ N A ++ EM++ + P+ Y ++ L
Sbjct: 623 MCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 658
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 88/227 (38%), Gaps = 41/227 (18%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K + V YN+LI ++CR LL +MR+ P +TYN ++ G+
Sbjct: 257 KGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLI 316
Query: 350 ACELLEEML-----------------------------------GRNCHPDAITYEIFIV 374
A +LL EML + P ++Y + +
Sbjct: 317 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLD 376
Query: 375 YSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSS 434
C+ +FD+A F+ +M + G+ T+ I G ++A VVL + K
Sbjct: 377 GLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEA---VVLLNEMSKDG 433
Query: 435 SN---MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ + YS L + K AK ++ + + GL PN +Y ++
Sbjct: 434 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 480
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 41/93 (44%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
LL M ++ P ++ ++ + CKNG +A EL M D ++Y + I C
Sbjct: 951 LLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLC 1010
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
G +AF + +M G T+ A I+G
Sbjct: 1011 AKGDMALAFELYEEMKGDGFLANATTYKALIRG 1043
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 58/132 (43%)
Query: 279 LGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
+GL + ++ + E +N+LI + C + DL+ M +G T + ++
Sbjct: 807 IGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMV 866
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
VL +N + ++ +L EM + P++ Y I CRVG AF +M+ +
Sbjct: 867 SVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKIC 926
Query: 399 PRLATHAAFIKG 410
P +A ++
Sbjct: 927 PPNVAESAMVRA 938
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 90/224 (40%), Gaps = 35/224 (15%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
+ R V +N +I MCR D G L M + G P TY ++ LC+ G+ D
Sbjct: 269 RGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIED 328
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A + E+M GR P+A+ + I I C+ G + +M +RG++P T+ A +
Sbjct: 329 ARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVN 388
Query: 410 GYFIFYRYEDAYKYVV------LSADKYKSSS-------------------NML------ 438
G + A VV L D ++ NM+
Sbjct: 389 GLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGL 448
Query: 439 ----YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
Y+ L S K A+ VL EMM+ GL P+ + Y V+
Sbjct: 449 DEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVI 492
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 89/213 (41%), Gaps = 5/213 (2%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI+ +G E A+ V +K + + ILI C++ D + +L EMR+
Sbjct: 315 ALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRER 374
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P +TYN ++ LC+ A ++ EM PD +TY I C+ + D+A
Sbjct: 375 GVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMA 434
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
MV G+ T+ A I G R DA + + + N Y+++
Sbjct: 435 MEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDA 494
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ + +L EM G +P V Y ++
Sbjct: 495 FCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIM 527
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 84/218 (38%), Gaps = 38/218 (17%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKN-------------- 344
YN ++ +CR D K ++VEMR G P T+TY ++ CK
Sbjct: 383 YNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMV 442
Query: 345 ---------------------GQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
G+ ADA +L EM+ PD TY + I CR G
Sbjct: 443 AEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVK 502
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
+M +G +P + T+ + G+ + ++A + + S ++ Y++L
Sbjct: 503 TGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILL 562
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
H K+ + + S G P++ VY ++ +
Sbjct: 563 DGHCKHGKVTDIEELKS---AKGTVPDLGVYTSIVGEI 597
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 70/162 (43%)
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
+++ G P +N ++ L + G+ A A + +EM R +++ I CR
Sbjct: 229 LQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRA 288
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
G D A +M + G+ P + T+ A I+G R EDA + + +++
Sbjct: 289 GDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVF 348
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
++L H K + + EM + G+RP+ Y ++ L
Sbjct: 349 TILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGL 390
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 80/184 (43%), Gaps = 8/184 (4%)
Query: 295 KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
+ +N+L++++ R + +++ EM+ G +++N ++ +C+ G D D E L
Sbjct: 239 EAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAG-DLDGAETL 297
Query: 355 EEMLGR-NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
+ PD TY I CRVG+ + A F +M RG++P I +
Sbjct: 298 HRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHC- 356
Query: 414 FYRYEDAYKYVVLSADKYKSS---SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
+ DA + L + + + Y+ + + + + A ++ EM GLRP+
Sbjct: 357 --KKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPD 414
Query: 471 VSVY 474
Y
Sbjct: 415 TVTY 418
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 56/116 (48%), Gaps = 5/116 (4%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI S G A+ V+ + E + Y ++I CR+ D K LL EM+
Sbjct: 455 ALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNK 514
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
G +P +TYN ++ CK GQ +A LL M+ PD ITY I + C+ GK
Sbjct: 515 GRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGK 570
>gi|414875981|tpg|DAA53112.1| TPA: hypothetical protein ZEAMMB73_920038 [Zea mays]
Length = 574
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 74/142 (52%), Gaps = 2/142 (1%)
Query: 263 SCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
+CL++G + SV GL + K K + V YN+LI +C + + + LL EM
Sbjct: 405 NCLITGFTTSRDWRSVSGLLDEMKE--KGVKADVVTYNVLIGALCCKGEVRKAVKLLDEM 462
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
+VG EP + YN ++ C+ G A E+ M R + +TY +F+ Y C++GK
Sbjct: 463 VEVGLEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEKRKKRANVVTYNVFLKYFCKMGKM 522
Query: 383 DVAFNFFNQMVKRGLQPRLATH 404
D A N+M+++GL P T+
Sbjct: 523 DEANVVLNEMLEKGLVPNRITY 544
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 81/187 (43%), Gaps = 19/187 (10%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQ-----DADACEL 353
+NI+I C+ + D+ + G P TYN ++ CK GQ DA L
Sbjct: 191 FNIVISGFCKTGQLRKAGDVAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVDA--L 248
Query: 354 LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
L+EM+ PD +T+ + I C+ A F +M ++G+ + T+ + + G
Sbjct: 249 LKEMIQAGISPDVVTFNVLINGYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCR 308
Query: 414 FYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHD------KNNNPVMAKNVLSEMMKNGL 467
+ ED+ K V + L +L++++ K V A+ + + + G+
Sbjct: 309 EGKVEDSIKLV------EEMEELGLACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGM 362
Query: 468 RPNVSVY 474
+PNV Y
Sbjct: 363 KPNVITY 369
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 101/229 (44%), Gaps = 7/229 (3%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGL-YEMAKYVIKKTER----KVSYYNILIKEM 306
++VE + ++G +C++S + +++ F G+ E +V +R V YN L+
Sbjct: 317 KLVEEMEELGLACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGY 376
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
R K M G P TYN ++ + LL+EM + D
Sbjct: 377 RRLGKMKEAAAAKDAMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADV 436
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
+TY + I C G+ A ++MV+ GL+P+ + I G+ + A++ + L
Sbjct: 437 VTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHE-IRL 495
Query: 427 SADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+K K +N++ Y++ K A VL+EM++ GL PN Y
Sbjct: 496 RMEKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITY 544
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 79/194 (40%), Gaps = 3/194 (1%)
Query: 296 VSYYNILIKEMCRRCDFKG---PRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
V+ YN LI C+R LL EM Q G P +T+N ++ CK A +
Sbjct: 223 VATYNTLIDGYCKRGQVGKMYHVDALLKEMIQAGISPDVVTFNVLINGYCKEPNITAAIK 282
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+ +EM + + +TY + CR GK + + +M + GL L+T + + G+
Sbjct: 283 VFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEEMEELGLACILSTMNSVLNGFC 342
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
+A +V A + + + Y+ L + + A M G+ PNV
Sbjct: 343 KKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRLGKMKEAAAAKDAMAGKGISPNVK 402
Query: 473 VYRRVLKHLHTSHQ 486
Y ++ TS
Sbjct: 403 TYNCLITGFTTSRD 416
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 96/237 (40%), Gaps = 9/237 (3%)
Query: 243 KALTKKGIWRVVEVLNQ-VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNI 301
K + + GI V N + G C + A I++F EM + I V YN
Sbjct: 250 KEMIQAGISPDVVTFNVLINGYCKEPNITAAIKVFQ-----EMRQQGIPAN---VVTYNS 301
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
L+ +CR + L+ EM ++G I T N VL CK G +A ++ + R
Sbjct: 302 LVSGLCREGKVEDSIKLVEEMEELGLACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRG 361
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
P+ ITY + R+GK A + M +G+ P + T+ I G+ +
Sbjct: 362 MKPNVITYNTLVDGYRRLGKMKEAAAAKDAMAGKGISPNVKTYNCLITGFTTSRDWRSVS 421
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ +K + + Y++L A +L EM++ GL P Y ++
Sbjct: 422 GLLDEMKEKGVKADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTII 478
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 51/121 (42%), Gaps = 3/121 (2%)
Query: 364 PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY 423
PD T+ I I C+ G+ A + + G+ P +AT+ I GY + Y
Sbjct: 186 PDLFTFNIVISGFCKTGQLRKAGDVAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHV 245
Query: 424 VVLSADKYK---SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKH 480
L + + S + +++L + + K N A V EM + G+ NV Y ++
Sbjct: 246 DALLKEMIQAGISPDVVTFNVLINGYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSG 305
Query: 481 L 481
L
Sbjct: 306 L 306
>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
Length = 953
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 101/226 (44%), Gaps = 15/226 (6%)
Query: 280 GLYEMAKYVIKK------TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV----GCEP 329
G+ E AKY++ + T ++Y +L + C +++E+ ++ G
Sbjct: 658 GVVEKAKYLLNEMASAGFTPTPLTYRRVL-----QACSGSRSPYVILEVHELMMGAGLHA 712
Query: 330 ITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFF 389
YN ++ VLC +G A +L+EMLGR PD IT+ I+ C+ D AF +
Sbjct: 713 DITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATY 772
Query: 390 NQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKN 449
QM+ +GL P +AT + G R +A + +N+ Y +L + + K
Sbjct: 773 AQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKK 832
Query: 450 NNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSS 495
+N V A + EM+ G P S Y ++ + + AK L S
Sbjct: 833 SNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFS 878
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 93/223 (41%), Gaps = 2/223 (0%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCD 311
R ++ L VG + L+ G + +M + L + E + + V YN L+ D
Sbjct: 182 RGIDGLGVVGWNALIDGYCKVQDMAAALAVVE--RMTTQGLSLDVVGYNTLVAGFFYSGD 239
Query: 312 FKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEI 371
++ M+ G EP +T+ ++G CK + +A L E M+ PD +T
Sbjct: 240 ADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSA 299
Query: 372 FIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKY 431
+ CR G+F A+ F +M K G+ P T+ FI R ++ + +
Sbjct: 300 LVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRG 359
Query: 432 KSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ ++Y+ + K AK+VL + + + PN Y
Sbjct: 360 VAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTY 402
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 86/198 (43%), Gaps = 15/198 (7%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+ I +CR F + L EMR G EP TYN ++ C+ G + A +LL EM
Sbjct: 577 YNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMK 636
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG-------Y 411
+ P+ ITY +V G + A N+M G P T+ ++ Y
Sbjct: 637 WSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPY 696
Query: 412 FIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
I +E +++ A + + +Y+ L + + A VL EM+ G+ P+
Sbjct: 697 VILEVHE-----LMMGAGLHADIT--VYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDT 749
Query: 472 SVYRR-VLKHLHTSHQEH 488
+ +L H +SH ++
Sbjct: 750 ITFNALILGHCKSSHLDN 767
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 4/180 (2%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
L+ + + + + L +M + G + Y ++ L K G A ++ +E++ RN
Sbjct: 510 LVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERN 569
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
PDA+ Y +FI CR+GKF A +F +M GL+P AT+ I A
Sbjct: 570 LSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKAL 629
Query: 422 KYVVLSADKYKS-SSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
K +L+ K+ S N++ Y+ L + AK +L+EM G P YRRVL+
Sbjct: 630 K--LLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQ 687
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 63/154 (40%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
E+ + P + YN + LC+ G+ ++A L+EM PD TY I CR G
Sbjct: 564 ELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREG 623
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
A N+M ++P L T+ + G E A + A + + + Y
Sbjct: 624 NTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYR 683
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + +P + V MM GL +++VY
Sbjct: 684 RVLQACSGSRSPYVILEVHELMMGAGLHADITVY 717
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 63/153 (41%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
LL EM G + Y V+ L K G+ +A ++L L N P+ +TY + + C
Sbjct: 351 LLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHC 410
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
R G D A QM ++ + P + T ++ + G A Y+ D + + +
Sbjct: 411 RAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVV 470
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
Y L K A +V +M+ G+ N
Sbjct: 471 TYGTLIDGFFKCQGQEAALDVYRDMLHEGVEAN 503
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 71/176 (40%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +L+ CR + G +L++M + P +T++ +L L K G A A + +M
Sbjct: 402 YTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMK 461
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ +TY I + + A + + M+ G++ + + G E
Sbjct: 462 DSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIE 521
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+A ++ ++ Y+ L K N A V E+M+ L P+ VY
Sbjct: 522 EAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVY 577
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 54/116 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
++ +N L+ + ++ EM+++G EP LTY+ ++ K +A L
Sbjct: 784 IATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYC 843
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
EM+ + P A TY I + G + A F++M +RG+ +T+ + G+
Sbjct: 844 EMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGW 899
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 71/173 (41%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
L+ +CR F L EM ++G P +TY + L K + ++ LL EM+ R
Sbjct: 300 LVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRG 359
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
D + Y + + GK + A + + + P T+ + + + A
Sbjct: 360 VAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAE 419
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ ++ +K S + + +S + + K A + +M +G+ PNV Y
Sbjct: 420 QMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTY 472
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 89/186 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+I+I +C+ ++L EM+ G P ++Y+ ++ C G+ + L +
Sbjct: 237 VITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFD 296
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM+ + PD +T+ + I C+ GK A M++RG+ P L T+ + I G+ +
Sbjct: 297 EMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVG 356
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
A + + K + Y+ L + + K A N+ +EM++ G PNV+ Y
Sbjct: 357 DLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYG 416
Query: 476 RVLKHL 481
+LK L
Sbjct: 417 TLLKGL 422
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 102/241 (42%), Gaps = 5/241 (2%)
Query: 271 ALIEMFSVLGLYEMAKY-----VIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
LI F G ++ +K+ V + + + +++LI +C+ + LL M Q
Sbjct: 277 TLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQR 336
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P +TYN ++ C G A EL M + PD I+Y I C+ K A
Sbjct: 337 GIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEA 396
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
N +N+M++ G P + T+ +KG F + DA K + S+++ +Y +
Sbjct: 397 MNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDG 456
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSS 505
KN+ A + +E+ + N+ Y ++ L + + A L + S L
Sbjct: 457 LCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPD 516
Query: 506 V 506
V
Sbjct: 517 V 517
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 4/130 (3%)
Query: 275 MFSVLGLY-EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLT 333
+F + L+ E+ Y K + Y+ LI +C+ + +L ++ Q G +P +T
Sbjct: 463 LFEAMELFNELKSYNFK---LNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVT 519
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
YN ++ CK GQ +A L E+M C PD I Y + C K + ++MV
Sbjct: 520 YNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMV 579
Query: 394 KRGLQPRLAT 403
++ + P A+
Sbjct: 580 QKDVSPNAAS 589
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 83/189 (43%), Gaps = 23/189 (12%)
Query: 251 WRVVEVLN------QVGGSCLVSGVRALIEMFSVLGLYEMAK-------YVIKKT---ER 294
W+V E +N QVG S V+ L++ GL++ K + + KT
Sbjct: 391 WKVKEAMNLYNEMLQVGKSPNVTTYGTLLK-----GLFQKGKVGDAKKLFGVMKTYGVSA 445
Query: 295 KVSYYNILIKEMCRR-CDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACEL 353
Y I + +C+ C F+ +L E++ + Y+ ++ LCK G+ A EL
Sbjct: 446 NSQIYGIFLDGLCKNDCLFEA-MELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWEL 504
Query: 354 LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
E++ PD +TY I I C+VG+ D A F +M + G P + + + G+
Sbjct: 505 FEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCE 564
Query: 414 FYRYEDAYK 422
+ E+ K
Sbjct: 565 GNKLEEVIK 573
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 77/200 (38%), Gaps = 40/200 (20%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVI-----KKTERKVSYYNILIKEM 306
+++EV+ Q G + +LI+ F ++G A+ + K E Y LI
Sbjct: 328 KLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGY 387
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL----------------GV---------- 340
C+ K +L EM QVG P TY +L GV
Sbjct: 388 CKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANS 447
Query: 341 ---------LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQ 391
LCKN +A EL E+ N + Y I C+ GK + A+ F +
Sbjct: 448 QIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEK 507
Query: 392 MVKRGLQPRLATHAAFIKGY 411
+ + GLQP + T+ I G+
Sbjct: 508 LSQEGLQPDVVTYNIMIHGF 527
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 82/188 (43%), Gaps = 21/188 (11%)
Query: 206 GRLDDYETMRQLLNDFNVYQVCLNEKAFG-FLPVLISSKALTKKGIWRVVEVLNQVGG-- 262
G++ D ++L Y V N + +G FL L + L + +E+ N++
Sbjct: 426 GKVGD---AKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCL-----FEAMELFNELKSYN 477
Query: 263 --------SCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKG 314
SCL+ G+ ++ + L+E K + + V YNI+I C+
Sbjct: 478 FKLNIENYSCLIDGLCKAGKLETAWELFE--KLSQEGLQPDVVTYNIMIHGFCKVGQVDN 535
Query: 315 PRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIV 374
L +M + GC P + YN +L C+ + + +LL +M+ ++ P+A + I +
Sbjct: 536 ANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVD 595
Query: 375 YSCRVGKF 382
C+ K+
Sbjct: 596 MLCKDEKY 603
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 76/189 (40%), Gaps = 6/189 (3%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+S +N L+ + + + L EMR G P T + + LC + ++A +
Sbjct: 91 ISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMA 150
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+L R P+ +TY I C + A F +M K G P T+ IKG
Sbjct: 151 GILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTG 210
Query: 416 RYEDA---YKYVVLSADKYKSSSN---MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
A +K ++ A +Y + + YS++ K AK + EM G+ P
Sbjct: 211 NVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIP 270
Query: 470 NVSVYRRVL 478
+V Y ++
Sbjct: 271 DVISYSTLI 279
Score = 41.6 bits (96), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 71/177 (40%), Gaps = 9/177 (5%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
MR PI+ ++N +LG L K + L EM PD T I C V +
Sbjct: 83 MRSHPIPPIS-SFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNR 141
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML-YS 440
A +++RG P + T+ IKG + +R +A + + L K + N + Y
Sbjct: 142 VSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATR-LFLRMQKLGCTPNAVTYG 200
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNG------LRPNVSVYRRVLKHLHTSHQEHMAK 491
L + N +A + EM+ + +P V Y ++ L +E AK
Sbjct: 201 TLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAK 257
>gi|255660796|gb|ACU25567.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 418
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 85/183 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ L EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 206 VYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G A + ++M+ +GL P T+ I G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEG 325
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A++Y + ++ Y+ L S + V A+ +L EM+ GL+P + Y
Sbjct: 326 DLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYT 385
Query: 476 RVL 478
++
Sbjct: 386 MII 388
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 76/181 (41%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ + + + + + + + P +++N ++ K G + L M
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
PD TY + I C+ K D A F++M+ +GL P T I G+ R
Sbjct: 198 QVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGHCKNGRV 257
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ A + + S + Y+ L K + A++++ EM+ GL P+ Y +
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTL 317
Query: 478 L 478
+
Sbjct: 318 I 318
>gi|410109887|gb|AFV61023.1| pentatricopeptide repeat-containing protein 11, partial [Junellia
succulentifolia]
Length = 429
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ +L EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 210 VYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 269
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD +TY I C+ G A + ++M +GL+P T+ I G
Sbjct: 270 QMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEG 329
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A++Y + ++ Y+ L S + V A+ +L EM+ GL+P + Y
Sbjct: 330 DLETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 389
Query: 476 RVL 478
++
Sbjct: 390 MII 392
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 77/181 (42%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ C+ + + + + + + G P +++N ++ K G + L + M
Sbjct: 142 FFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEXFRLKKAM 201
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
PD TY + I C+ K D F++M+ GL P T I G+ R
Sbjct: 202 QASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGHCKNGRV 261
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ A + + S + Y+ L K + A++++ EM GL+P+ Y +
Sbjct: 262 DLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTL 321
Query: 478 L 478
+
Sbjct: 322 I 322
>gi|224083888|ref|XP_002307160.1| predicted protein [Populus trichocarpa]
gi|222856609|gb|EEE94156.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 88/190 (46%), Gaps = 6/190 (3%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YNILIK +C+ ++LL EM + G P +TYN ++ LCK +A L
Sbjct: 499 VIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLS 558
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+ + P+ ITY I C G+ D A +N+M ++G P + AFI G
Sbjct: 559 MMIEKEREPNVITYSTLINGLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGLSNCG 618
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN----- 470
R +A Y+ ++ +Y L + ++N +A +L EM+ G P+
Sbjct: 619 RPNEALVYLREMEEREMKPDTYVYVGLLNAFLVDSNQPLAFEILQEMVDKGKFPDLHDKN 678
Query: 471 -VSVYRRVLK 479
+SV +LK
Sbjct: 679 HISVRNAILK 688
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
L+KE+C+ LV+M + G +P + Y+ L L K + A +L +++ +
Sbjct: 435 LVKELCKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQG 494
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
PD I Y I I C+ + A N ++M ++GL P T+ I G E+A
Sbjct: 495 YCPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAM 554
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
++ + +K + + + YS L + P A + +EM + G P+ Y
Sbjct: 555 LFLSMMIEKEREPNVITYSTLINGLCNAGRPDDALVLWNEMGRKGCTPSSIAY 607
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%)
Query: 306 MCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPD 365
+CRR D G LL +MR G P ++ LCK+G++ +AC+ L +M PD
Sbjct: 404 LCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKELCKHGKEVEACKFLVDMAEEGFQPD 463
Query: 366 AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV 425
+ Y + ++ + D A F + +G P + + IKG R +A +
Sbjct: 464 IVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVIAYNILIKGLCKTQRIAEAQNLLH 523
Query: 426 LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+K S + Y+ L K ++ A LS M++ PNV Y ++ L
Sbjct: 524 EMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSMMIEKEREPNVITYSTLINGL 579
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 94/229 (41%), Gaps = 38/229 (16%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
+ ++I+I + + D L +M ++GC+P L YN ++ LC + + ++C LL+E
Sbjct: 325 TTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQE 384
Query: 357 MLGRNCHPDAIT-----------YEI-----------------FIVYS-------CRVGK 381
M P + T ++I +I +S C+ GK
Sbjct: 385 MEESGIEPTSFTNNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKELCKHGK 444
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSNMLYS 440
A F M + G QP + ++A + G + A K + + A Y + Y+
Sbjct: 445 EVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGY-CPDVIAYN 503
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL-HTSHQEH 488
+L K A+N+L EM + GL P+ Y ++ L T H E
Sbjct: 504 ILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEE 552
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 42/106 (39%), Gaps = 16/106 (15%)
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNC----------------HPDAITYEIFIV 374
TL YN VL L NG A LL+ + NC P++ T+ I I
Sbjct: 273 TLLYNSVLNSLVDNGSVHKAYHLLQAITIGNCIGDGEIGKLFRGKAMVPPNSTTFSIVIN 332
Query: 375 YSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
+ G D+A F M + G +P L + I G R +++
Sbjct: 333 GLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQES 378
>gi|410109867|gb|AFV61013.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia salsoloides]
Length = 410
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 88/186 (47%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V Y++LI +C+ G +L EM G P +T+ ++ CKNG+ A E
Sbjct: 195 EPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAME 254
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+ ++ML ++ D ITY I C+ G A N ++M +GL+P T+ I G
Sbjct: 255 IYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKITYTTLIDGCC 314
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
E A+++ + +++Y+ L S + V A+ +L EM+ GL+P+
Sbjct: 315 KEGDLETAFEHRKRMIQENIRLDDVVYTTLISGLCQEGRSVDAEKMLREMLSVGLKPDTG 374
Query: 473 VYRRVL 478
Y ++
Sbjct: 375 TYTMII 380
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 85/187 (45%), Gaps = 12/187 (6%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ C+ + + R + + + G P +++N ++ + G + L M
Sbjct: 130 FFNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAM 189
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
PD TY + I C+ K D A F++M+ +GL P T I G+ R
Sbjct: 190 HASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRV 249
Query: 418 E---DAYKYVV---LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
+ + YK ++ LSAD + + ++Y L K + A+N++ EM GL+P+
Sbjct: 250 DLAMEIYKQMLSQSLSAD-LITYNTLIYGLC-----KKGDLKQAQNLIDEMRMKGLKPDK 303
Query: 472 SVYRRVL 478
Y ++
Sbjct: 304 ITYTTLI 310
>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
Length = 727
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 88/190 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN++I +C+ + K +DL ++M G +P +TY ++ C+ G ++A +LL M+
Sbjct: 527 YNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMV 586
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P +TY I I CR G A+ +F +M+ G++P T+ I R
Sbjct: 587 SDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTL 646
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
AY + ++ + + Y+LL + + N A + EM +NG+ P+ + +
Sbjct: 647 LAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALF 706
Query: 479 KHLHTSHQEH 488
K H H
Sbjct: 707 KGFDKGHMYH 716
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 1/184 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++ C+ + K LL ++R+ G P LTYN ++ C+ G +A L EEM+
Sbjct: 387 YNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMV 446
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C PD TY I + S +V +A FF++M+ +GLQP + I I
Sbjct: 447 EQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTH 506
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A++ + K + Y+++ K N AK++ +M+ +GL+P+ Y L
Sbjct: 507 KAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITY-TCL 565
Query: 479 KHLH 482
H H
Sbjct: 566 IHAH 569
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 91/220 (41%), Gaps = 6/220 (2%)
Query: 261 GGSCLVSGV--RALIEMFSVLGLYEMAKYVIK--KTERKVS--YYNILIKEMCRRCDFKG 314
GG CL++ V +I + G E A ++ + +K S YN LI + R +
Sbjct: 273 GGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSKKASSFTYNPLITALLERGFVQK 332
Query: 315 PRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIV 374
L +EM G P +TYN ++ L K+ Q A EM PD ITY +
Sbjct: 333 VEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLN 392
Query: 375 YSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSS 434
C+ G A + + GL P + T+ I GY E+A + ++
Sbjct: 393 GYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFP 452
Query: 435 SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
Y++L + K N MA+ EM+ GL+P+ Y
Sbjct: 453 DVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAY 492
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 69/158 (43%), Gaps = 4/158 (2%)
Query: 321 EMRQV----GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
++R+V G P T+TYN ++ LCK G DA +L +M+ PD ITY I
Sbjct: 510 QLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAH 569
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
C G A N MV GLQP + T+ I AY + D +
Sbjct: 570 CERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNE 629
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ Y++L + ++A + EM++ GL PN Y
Sbjct: 630 ITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTY 667
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 74/171 (43%), Gaps = 15/171 (8%)
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM--LGRNCHPDAITYEIFI 373
R + EM Q+ EP +TYN +L K G+ +A LL+EM G C + +TY + I
Sbjct: 228 RAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVI 287
Query: 374 VYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA-AFIKGYFIFYRYEDAYKYVVLSADKYK 432
+ R G + A + M RL+ A +F I E + V +
Sbjct: 288 SFLAREGHLENAAKLVDSM-------RLSKKASSFTYNPLITALLERGFVQKVEALQMEM 340
Query: 433 SSSNMLYSLL---ASLHD--KNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ ++ +L+ A +H K+ A+ +EM GL P++ Y +L
Sbjct: 341 ENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSML 391
>gi|225461528|ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Vitis vinifera]
Length = 546
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 150/361 (41%), Gaps = 17/361 (4%)
Query: 129 TPKQVSEIIELLR-SGDSETESKLLSMSVSLSNASVIEILRVLNSEKVSALCFLKYMRE- 186
T +V +++ R S SE E L +SL++ V+++L+ S+ A F +
Sbjct: 86 TALEVQNLLKTYRDSSVSEIEGALHQCRLSLTDDLVLDVLKRHRSDWRPAYVFFNWASRC 145
Query: 187 -IMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKAL 245
I + + + ++D GR+ + M QL ++ + + +NE+ FG VL++ A
Sbjct: 146 GIESGYSPGCGVHNEILDILGRMRRFHEMTQLFDEMSKRKGLVNERTFG---VLLNRYAA 202
Query: 246 TKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLY---EMAKYVI--KKTE--RKVSY 298
K V++ N+ G + A + L Y EMA+++ KK E +
Sbjct: 203 AHK-TEEAVKIFNKRKGLGFELDLIAFQTLLMSLCRYKHVEMAEFLFHSKKNEFPPDIKS 261
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
N+++ C + + ++ C+P TY + L K G+ + A +L + M
Sbjct: 262 MNVILNGWCVLGSLREAKRFWNDIITSKCKPDKFTYGIFINSLTKAGKLSTAVKLFQAMW 321
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C+PD I C + A +M +R QP +AT+ + IK R+E
Sbjct: 322 EKGCNPDVAICNCIIDALCFKKRIPEALEVLREMNERDCQPDVATYNSLIKHLCKIQRFE 381
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
Y+ + K + Y L K P +L M +NG R N Y +L
Sbjct: 382 KVYELLDDMEQKGCLPNARTYGYLLKSTKK---PEEVPGILERMERNGCRMNSDCYNLIL 438
Query: 479 K 479
K
Sbjct: 439 K 439
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 56/140 (40%), Gaps = 32/140 (22%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL----------GVL---- 341
V+ YN LIK +C+ F+ +LL +M Q GC P TY Y+L G+L
Sbjct: 364 VATYNSLIKHLCKIQRFEKVYELLDDMEQKGCLPNARTYGYLLKSTKKPEEVPGILERME 423
Query: 342 ---------CKN---------GQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
C N G + L+EM PD TY I I G+ D
Sbjct: 424 RNGCRMNSDCYNLILKLYMDWGYELKLRSTLDEMERNGMGPDQRTYTIMIHGLYDKGRMD 483
Query: 384 VAFNFFNQMVKRGLQPRLAT 403
A ++F QM G+ P T
Sbjct: 484 DALSYFKQMTLMGMVPEPRT 503
>gi|449484422|ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 155/384 (40%), Gaps = 25/384 (6%)
Query: 115 RCISSFAMVNGPYATPK------QVSEIIELLRSGDSETESKLLSMSVSLSNASVIEILR 168
R +SFA + P ++S I+ R+ + E L S S ++S V ++L+
Sbjct: 30 RSFTSFATEARAGSDPTLPFLVSEISRILSDRRNPHHDLEVGLSSFSSNVSTDLVEQVLK 89
Query: 169 VLNSEKVSALCFLKYMREIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDF-NVYQVC 227
+ SA F + + I P F + D +V+D G + + L +
Sbjct: 90 RCKNIAFSAHRFFLWAKRI-PGFEPSDDSYHIVVDILGGSGQFAILWDFLIEIRETRSSV 148
Query: 228 LNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVL-------- 279
+ + F + S L + I N++G + +GV L ++ L
Sbjct: 149 ITHELFWHVFTAYSRADLPQDAI----RAFNRMGEFGIRAGVDDLDKLLYTLCKRKHVAH 204
Query: 280 --GLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYV 337
++ K V + V Y+IL + D + + EMR+ GC L YN +
Sbjct: 205 AQQFFDKVKSVFNPS---VKTYSILTRGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSL 261
Query: 338 LGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
L LCK G+ +A ++ EM PDA TY IFI SC+ + + ++ L
Sbjct: 262 LEALCKGGKRDEAYKMFLEMDSNGVDPDADTYSIFIRSSCQENDLHTVYRVLERTKRKNL 321
Query: 398 QPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKN 457
P + T+ IK E+AY+ + ++ + Y+ + + H ++ A N
Sbjct: 322 LPNVFTYNCVIKKLCKDQNVEEAYQILDEMIERGVTPDTWSYNAIQAYHCDHSEVNSALN 381
Query: 458 VLSEMMKNGLRPNVSVYRRVLKHL 481
++ M ++ P+ Y VLK L
Sbjct: 382 LVKRMDRDKCVPDKHTYNMVLKLL 405
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 23/219 (10%)
Query: 288 VIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLC 342
V+++T+RK V YN +IK++C+ + + +L EM + G P T +YN + C
Sbjct: 312 VLERTKRKNLLPNVFTYNCVIKKLCKDQNVEEAYQILDEMIERGVTPDTWSYNAIQAYHC 371
Query: 343 KNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLA 402
+ + A L++ M C PD TY + + RVG+FD A + M KRG P ++
Sbjct: 372 DHSEVNSALNLVKRMDRDKCVPDKHTYNMVLKLLVRVGRFDRANEVWESMGKRGFYPSVS 431
Query: 403 THAAFIKGY-FIFYRYEDAYKYVVLSADK----YKSSSNMLYSLLASLHDKNNNPVMAKN 457
T+A I G+ ++ E+A KY + D+ Y ++ +L L + K+ ++
Sbjct: 432 TYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYIATVELLRDRLLGIGFKDQVAILGDK 491
Query: 458 V----------LSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
+ L+ +M G R + +LK+ T H+
Sbjct: 492 MKRSTSCSIQELANLMSGGKRREA---QSMLKNEETEHE 527
>gi|15219974|ref|NP_173709.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806406|sp|P0C7Q9.1|PPR56_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g22960, mitochondrial; Flags: Precursor
gi|332192194|gb|AEE30315.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 718
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 92/191 (48%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
++ YN+ I +C+ + + ++ +VG P +TY V+ +NGQ A L +
Sbjct: 515 LTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYD 574
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EML + +P ITY + I + G+ + AF + +M KRG++P + TH A + G
Sbjct: 575 EMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAG 634
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
++AY+Y+ ++ + Y++L S + + EM+ + P+ +R
Sbjct: 635 NIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHR 694
Query: 476 RVLKHLHTSHQ 486
+ KHL H+
Sbjct: 695 ALFKHLEKDHE 705
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 80/216 (37%), Gaps = 36/216 (16%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C + +G + L EM P +TY ++ KNG + A E+ +EML
Sbjct: 412 YNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEML 471
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV------------------------- 393
+ PD Y V R+G D AF +MV
Sbjct: 472 RKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNL 531
Query: 394 -----------KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
+ GL P T+ I+GY +++ A K S + Y +L
Sbjct: 532 VKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVL 591
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
H K A +EM K G+RPNV + +L
Sbjct: 592 IYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALL 627
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 99/263 (37%), Gaps = 38/263 (14%)
Query: 243 KALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNIL 302
+ + + GI V N + SC +G ++ + EM + I+ +E YNIL
Sbjct: 227 ETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWL----EMKRRNIEFSE---VTYNIL 279
Query: 303 IKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNC 362
I + + R +MR+ G ++N ++ CK G DA + +EML
Sbjct: 280 INGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGI 339
Query: 363 HPDAITYEIFIVYSCRVGKFD--------------VAFN-----------------FFNQ 391
+P TY I+I C G+ D V++N F+
Sbjct: 340 YPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDD 399
Query: 392 MVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNN 451
+ + P + T+ I G E A + + + Y+ L KN N
Sbjct: 400 LRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGN 459
Query: 452 PVMAKNVLSEMMKNGLRPNVSVY 474
MA V EM++ G++P+ Y
Sbjct: 460 LSMATEVYDEMLRKGIKPDGYAY 482
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 85/196 (43%), Gaps = 1/196 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ + F L ++R P +TYN ++ LC++G A L EEM
Sbjct: 377 YNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMT 436
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD ITY + + G +A +++M+++G++P + G +
Sbjct: 437 TQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSD 496
Query: 419 DAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
A++ + + A + + +Y++ K N V A ++ + GL P+ Y V
Sbjct: 497 KAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTV 556
Query: 478 LKHLHTSHQEHMAKCL 493
++ + Q MA+ L
Sbjct: 557 IRGYLENGQFKMARNL 572
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 85/183 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ +I +C+ ++L EM++ G P TYN ++ C +G+ +DA +LL+
Sbjct: 255 VVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQ 314
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EML R PD +TY I + GKF A +++M+ RG+ P T+ + I G+
Sbjct: 315 EMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQD 374
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R + A L A K S ++ L + +L EM + GL N Y
Sbjct: 375 RLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYN 434
Query: 476 RVL 478
++
Sbjct: 435 TLI 437
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 68/161 (42%)
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G EP LTYN ++ L G+ +A EL EEM R PD ITY I C+ + D A
Sbjct: 506 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
F M + P + T I GY R +D + + + ++Y L
Sbjct: 566 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 625
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
K N A ++ EM+ +G+ P+ R +L + +
Sbjct: 626 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEE 666
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 118/282 (41%), Gaps = 25/282 (8%)
Query: 230 EKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVI 289
E FG + + S KG+ +++ + + S + V ++ V+ E VI
Sbjct: 40 EAGFGGESLKLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVI 99
Query: 290 ---KKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+K ERK + +NILIK C ++ ++G P +T+ +L L
Sbjct: 100 SLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGL 159
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
C + ++A + +M C P+ +T+ + CR G+ A ++M++ GLQP
Sbjct: 160 CVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQ 219
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSS----SNMLYSLLASLHDKNNNPVMAKN 457
T+ + G + D + L + S + ++YS + K+ A+N
Sbjct: 220 ITYGTIVDG---MCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQN 276
Query: 458 VLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSS 499
+ +EM + G+ P++ Y ++ + C S R+S
Sbjct: 277 LFTEMQEKGIFPDLFTYNSMI----------VGFCSSGRWSD 308
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 3/153 (1%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEM---AKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDL 318
G C ++ +EMF + +M A + E V YNILI + F +L
Sbjct: 474 GLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEEL 533
Query: 319 LVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCR 378
EM G P T+TY+ ++ LCK + +A ++ M ++ P+ +T+ I C+
Sbjct: 534 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCK 593
Query: 379 VGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
G+ D F +M +RG+ + I G+
Sbjct: 594 AGRVDDGLELFCEMGRRGIVADAIIYITLIYGF 626
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 126/334 (37%), Gaps = 34/334 (10%)
Query: 172 SEKVSALCFLKYMREIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEK 231
+ VSAL L+ M E+ N I S +ID+ + + + L + + EK
Sbjct: 233 GDTVSALNLLRKMEEV-SHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE-------MQEK 284
Query: 232 AFGFLPVLISSKALT----KKGIWRVVEVLNQV----GGSCLVSGVRALIEMFSVLG-LY 282
G P L + ++ G W E L Q S V ALI F G +
Sbjct: 285 --GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFF 342
Query: 283 EMAKYVIKKTERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
E A+ + R + YN +I C++ D+ M GC P T+ ++
Sbjct: 343 EAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLI 402
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
C + D ELL EM R + +TY I C VG + A + QM+ G+
Sbjct: 403 DGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVC 462
Query: 399 PRLATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSN----------MLYSLLASLHD 447
P + T + G + +DA + + + K ++ + Y++L
Sbjct: 463 PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLI 522
Query: 448 KNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ A+ + EM G+ P+ Y ++ L
Sbjct: 523 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 5/132 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ +I +C++ + V M P +T+N ++ CK G+ D EL EM
Sbjct: 549 YSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMG 608
Query: 359 GRNCHPDAITYEIFIVYSCR-VGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
R DAI Y I ++Y R VG + A + F +M+ G+ P T + G F+
Sbjct: 609 RRGIVADAIIY-ITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG---FWSK 664
Query: 418 EDAYKYVVLSAD 429
E+ + V + D
Sbjct: 665 EELERAVAMLED 676
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 90/224 (40%), Gaps = 35/224 (15%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
+ R V +N +I MCR D G L M + G P TY ++ LC+ G+ D
Sbjct: 145 RGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIED 204
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A + E+M GR P+A+ + I I C+ G + +M +RG++P T+ A +
Sbjct: 205 ARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVN 264
Query: 410 GYFIFYRYEDAYKYVV------LSADKYKSSS-------------------NML------ 438
G + A VV L D ++ NM+
Sbjct: 265 GLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGL 324
Query: 439 ----YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
Y+ L S K A+ VL EMM+ GL P+ + Y V+
Sbjct: 325 DEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVI 368
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 89/213 (41%), Gaps = 5/213 (2%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI+ +G E A+ V +K + + ILI C++ D + +L EMR+
Sbjct: 191 ALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRER 250
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P +TYN ++ LC+ A ++ EM PD +TY I C+ + D+A
Sbjct: 251 GVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMA 310
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
MV G+ T+ A I G R DA + + + N Y+++
Sbjct: 311 MEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDA 370
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ + +L EM G +P V Y ++
Sbjct: 371 FCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIM 403
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 84/218 (38%), Gaps = 38/218 (17%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKN-------------- 344
YN ++ +CR D K ++VEMR G P T+TY ++ CK
Sbjct: 259 YNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMV 318
Query: 345 ---------------------GQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
G+ ADA +L EM+ PD TY + I CR G
Sbjct: 319 AEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVK 378
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
+M +G +P + T+ + G+ + ++A + + S ++ Y++L
Sbjct: 379 TGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILL 438
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
H K+ + + S G P++ VY ++ +
Sbjct: 439 DGHCKHGKVTDIEELKS---AKGTVPDLGVYTSIVGEI 473
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 70/162 (43%)
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
+++ G P +N ++ L + G+ A A + +EM R +++ I CR
Sbjct: 105 LQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRA 164
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
G D A +M + G+ P + T+ A I+G R EDA + + +++
Sbjct: 165 GDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVF 224
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
++L H K + + EM + G+RP+ Y ++ L
Sbjct: 225 TILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGL 266
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 80/184 (43%), Gaps = 8/184 (4%)
Query: 295 KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
+ +N+L++++ R + +++ EM+ G +++N ++ +C+ G D D E L
Sbjct: 115 EAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAG-DLDGAETL 173
Query: 355 EEMLGR-NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
+ PD TY I CRVG+ + A F +M RG++P I +
Sbjct: 174 HRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHC- 232
Query: 414 FYRYEDAYKYVVLSADKYKSS---SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
+ DA + L + + + Y+ + + + + A ++ EM GLRP+
Sbjct: 233 --KKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPD 290
Query: 471 VSVY 474
Y
Sbjct: 291 TVTY 294
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI S G A+ V+ + E + Y ++I CR+ D K LL EM+
Sbjct: 331 ALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNK 390
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
G +P +TYN ++ CK GQ +A LL M+ PD ITY I + C+ GK
Sbjct: 391 GRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKV 447
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 107/248 (43%), Gaps = 27/248 (10%)
Query: 231 KAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIK 290
K +GF P +++ L + G C +M V +Y+ + +
Sbjct: 257 KVWGFWPNVVTYNTL--------------IDGYC---------KMGRVGKMYKADAILKE 293
Query: 291 KTERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQ 346
E KVS +N+LI C+ + + EM+ G +P +TYN ++ LC G+
Sbjct: 294 MVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGK 353
Query: 347 DADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAA 406
+A LL+EML N P+ ITY I C+ + A F+ + K+GL P + T
Sbjct: 354 LNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNT 413
Query: 407 FIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNG 466
+ GY F + E+A+ + +K + Y+ L + KN+L+EM G
Sbjct: 414 LLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRG 473
Query: 467 LRPNVSVY 474
++ + Y
Sbjct: 474 VKADTVTY 481
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 85/197 (43%), Gaps = 13/197 (6%)
Query: 237 PVLISSKALT-----KKGIWRVVEVLNQVGGSCLVSGV---RALIEMFSVLGLYEMAKYV 288
P +I+ AL KK + E+ + +G L V L+ + G E A +
Sbjct: 371 PNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLL 430
Query: 289 IKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
K K S YN LI CR + ++LL EM+ G + T+TYN ++ C+
Sbjct: 431 QKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCE 490
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
+ A L++EML + P +TY I + C G A N QM K G + T
Sbjct: 491 KKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVT 550
Query: 404 HAAFIKGYFIFYRYEDA 420
+ I+GY + EDA
Sbjct: 551 YNVLIQGYCRKGKLEDA 567
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI C++ + R+L + + G P +T+N +L CK G+ +A L +
Sbjct: 373 VITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQK 432
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
ML + P+A TY IV CR GK + N N+M RG++ T+ I +
Sbjct: 433 VMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKK 492
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ A + + DK S++ Y++L + + N A N+ +M K G NV Y
Sbjct: 493 EPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYN 552
Query: 476 RVLK 479
+++
Sbjct: 553 VLIQ 556
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 52/106 (49%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNILI C + + K L+ EM G +P LTYN +L C G A L ++M
Sbjct: 481 YNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQME 540
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
+ +TY + I CR GK + A N+M+++GL P T+
Sbjct: 541 KEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTY 586
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 83/198 (41%), Gaps = 10/198 (5%)
Query: 312 FKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEI 371
FK D ++ + C P+ L L K + + +EM+ R P+ IT+
Sbjct: 183 FKRAGDYRYKLSVLSCNPL-------LSALVKENEFGGVEFVYKEMIRRKISPNLITFNT 235
Query: 372 FIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKY 431
I C+VGK + A + + M G P + T+ I GY R YK + +
Sbjct: 236 VINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMV 295
Query: 432 K---SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEH 488
+ S +++ +++L K+ N A V EM GL+P V Y ++ L + +
Sbjct: 296 ENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLN 355
Query: 489 MAKCLSSRYSSLSLGSSV 506
AK L S +L +V
Sbjct: 356 EAKVLLDEMLSSNLKPNV 373
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 9/208 (4%)
Query: 277 SVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNY 336
+VLGL + + + V N L+ + + +F G + EM + P +T+N
Sbjct: 176 TVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNT 235
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC---RVGKFDVAFNFFNQMV 393
V+ LCK G+ A +++++M P+ +TY I C RVGK A +MV
Sbjct: 236 VINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMV 295
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSNMLYSLLASL--HDKNN 450
+ + P T I G+ A K + + + K + SL+ L K N
Sbjct: 296 ENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLN 355
Query: 451 NPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
AK +L EM+ + L+PNV Y ++
Sbjct: 356 E---AKVLLDEMLSSNLKPNVITYNALI 380
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 16/106 (15%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNIL+ C + + +L +M + G +TYN ++ C+ G+ DA LL EML
Sbjct: 516 YNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEML 575
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
+ P+ TYEI +M+++G P + H
Sbjct: 576 EKGLIPNRTTYEIIK----------------EEMMEKGFLPDIEGH 605
>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1136
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 95/207 (45%), Gaps = 5/207 (2%)
Query: 266 VSGVRALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLV 320
V+ LI + G +E + Y+++K E+ + YN ++ C++ FK +LL
Sbjct: 233 VATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLD 292
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
M+ G + TYN ++ LC++ + A LL +M R HP+ +TY I G
Sbjct: 293 HMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEG 352
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
K +A N+M+ GL P T A I G+ +++A K + K + S + Y
Sbjct: 353 KVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYG 412
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGL 467
+L KN +A+ M +NG+
Sbjct: 413 VLLDGLCKNAEFDLARGFYMRMKRNGV 439
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 82/184 (44%), Gaps = 4/184 (2%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
S Y+ILI+ R + ++ M G P T N +LG + K+G+D L+E
Sbjct: 164 SVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKE 223
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
ML R PD T+ I I C G F+ + +M K G P + T+ + Y R
Sbjct: 224 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 283
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKN--VLSEMMKNGLRPNVSVY 474
++ A + + K + Y++L +HD + +AK +L +M K + PN Y
Sbjct: 284 FKAAIELLDHMKSKGVDADVCTYNML--IHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 341
Query: 475 RRVL 478
++
Sbjct: 342 NTLI 345
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 53/110 (48%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +L+ +C+ +F R + M++ G +TY ++ LCKNG +A LL EM
Sbjct: 411 YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMS 470
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
PD +TY I C+VG+F A ++ + GL P ++ I
Sbjct: 471 KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 520
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 99/240 (41%), Gaps = 22/240 (9%)
Query: 258 NQVGGSCLVSGVRALIEMFSVLGLY-EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPR 316
N V CL++G E ++ EM K T Y L+K +C+ +
Sbjct: 582 NTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPT---FFTYGSLLKGLCKGGHLREAE 638
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
L + V T+ YN +L +CK+G A A L EM+ R+ PD+ TY I
Sbjct: 639 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 698
Query: 377 CRVGKFDVAFNFFNQMVKRG-LQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
CR GK +A F + RG + P + F+ G F +++ A Y D +
Sbjct: 699 CRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWK-AGIYFREQMDNLGHTP 757
Query: 436 NML--------YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQE 487
+++ YS + + N ++L EM PN++ Y +L H ++ ++
Sbjct: 758 DIVTTNAMIDGYSRMGKIEKTN-------DLLPEMGNQNGGPNLTTY-NILLHGYSKRKD 809
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 5/216 (2%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI F +G ++ AK ++ + R Y+ LI CR K + M
Sbjct: 483 ALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILE 542
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G T+N ++ LCK G+ A+A E + M P+ ++++ I G+ A
Sbjct: 543 GHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKA 602
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
F+ F++M K G P T+ + +KG +A K++ + ++Y+ L +
Sbjct: 603 FSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTA 662
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K+ N A ++ EM++ + P+ Y ++ L
Sbjct: 663 MCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 698
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 88/227 (38%), Gaps = 41/227 (18%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K + V YN+LI ++CR LL +MR+ P +TYN ++ G+
Sbjct: 297 KGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLI 356
Query: 350 ACELLEEML-----------------------------------GRNCHPDAITYEIFIV 374
A +LL EML + P ++Y + +
Sbjct: 357 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLD 416
Query: 375 YSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSS 434
C+ +FD+A F+ +M + G+ T+ I G ++A VVL + K
Sbjct: 417 GLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEA---VVLLNEMSKDG 473
Query: 435 SN---MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ + YS L + K AK ++ + + GL PN +Y ++
Sbjct: 474 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 520
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 41/93 (44%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
LL M ++ P ++ ++ + CKNG +A EL M D ++Y + I C
Sbjct: 991 LLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLC 1050
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
G +AF + +M G T+ A I+G
Sbjct: 1051 AKGDMALAFELYEEMKGDGFLANATTYKALIRG 1083
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 58/131 (44%)
Query: 279 LGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
+GL + ++ + E +N+LI + C + DL+ M +G T + ++
Sbjct: 847 IGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMV 906
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
VL +N + ++ +L EM + P++ Y I CRVG AF +M+ +
Sbjct: 907 SVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKIC 966
Query: 399 PRLATHAAFIK 409
P +A ++
Sbjct: 967 PPNVAESAMVR 977
>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
Length = 770
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 5/203 (2%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
++ N LI +C+ + K +L M G E +TYN ++ CK + +A +L +
Sbjct: 462 IATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRD 521
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M+ R PD T+ F+ C +GK + + +QM GL+P + T+ I GY
Sbjct: 522 DMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAK 581
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
A KY++ + ++Y+ L + +N + A VL M NG++P Y
Sbjct: 582 DVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYN 641
Query: 476 RVL-----KHLHTSHQEHMAKCL 493
++ L +E A+C+
Sbjct: 642 SLMYWMCHAGLVEEAKEIFAQCI 664
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 8/180 (4%)
Query: 303 IKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNC 362
I+E+C+R + ++ + G T N ++ LC+ +A ++L+ M+
Sbjct: 434 IQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGV 493
Query: 363 HPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
D ITY I I + C+ K + A + M+KRG +P L T F++ Y + ED
Sbjct: 494 EFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILH 553
Query: 423 YVVLSADKYKSSS----NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ D+ KS + Y + + K + A L E++KNGLRPN +Y ++
Sbjct: 554 LL----DQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALI 609
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 98/235 (41%), Gaps = 7/235 (2%)
Query: 257 LNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTER------KVSYYNILIKEMCRRC 310
L+ G S + L+E G ++A+ V + V Y ++IK +CR
Sbjct: 171 LSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRAG 230
Query: 311 DFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYE 370
+ +L E+ + G +P +TYN ++ LC++G+ +A +L M+ P +T+
Sbjct: 231 EIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFG 290
Query: 371 IFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADK 430
I I R +F +M G+ P + I + +A + K
Sbjct: 291 ILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSK 350
Query: 431 YKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK-HLHTS 484
+ + Y+L+A K A+ +L EM+ G+ + S++ V+ HL +
Sbjct: 351 GIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGT 405
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 78/180 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +I C+ D L+E+ + G P + YN ++G +NG +DA +L+ M
Sbjct: 570 YGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMK 629
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P ITY + + C G + A F Q + + ++ + + I+G+ + +
Sbjct: 630 HNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKID 689
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A Y + + M Y+ L + K N A + EM+ +G+ P+ Y ++
Sbjct: 690 EAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLI 749
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 82/198 (41%), Gaps = 4/198 (2%)
Query: 283 EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLC 342
EM IK+T V YN++ K +C+ + + +L EM G +N V+
Sbjct: 346 EMVSKGIKQT---VVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHL 402
Query: 343 KNGQDADAC-ELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
+ D L+ EM+ R P+ I C+ GK + A + ++ +GL +
Sbjct: 403 RGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNI 462
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
AT A I G ++A K + D + Y+++ K + A + +
Sbjct: 463 ATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDD 522
Query: 462 MMKNGLRPNVSVYRRVLK 479
M+K G +P++ + L+
Sbjct: 523 MIKRGFKPDLFTFNTFLR 540
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 51/112 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ MC + +++ + E + Y ++ CK G+ +A +EM
Sbjct: 640 YNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMH 699
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
R+ P+ +TY + C+ G + AF F++MV G+ P ++ I G
Sbjct: 700 YRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISG 751
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 45/109 (41%), Gaps = 5/109 (4%)
Query: 280 GLYEMAKYV-----IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
GL E AK + +K E V Y I+I+ C+ EM P +TY
Sbjct: 651 GLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTY 710
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
++ CK G +A +L +EM+ PD ++Y I C V D
Sbjct: 711 TTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLD 759
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ +I +C+ ++L M + G P TYN ++ C +GQ +A L+
Sbjct: 234 VVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLK 293
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M PD +TY + Y C+ G+ A F+ M KRGL+P + T+ ++GY
Sbjct: 294 KMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKG 353
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ + + L ++ ++S+L + K A V S+M + GL P+ Y
Sbjct: 354 ALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYG 413
Query: 476 RVLKHL 481
V+ L
Sbjct: 414 TVIGIL 419
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 101/224 (45%), Gaps = 12/224 (5%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTER-KVSYYNILIKEMCRRCDFKGPRDLLV 320
GSC +G L F+ LG VIKK R + L+K +C D+++
Sbjct: 99 GSCCCAGRLDL--GFAALG------NVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVL 150
Query: 321 E-MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML--GRNCHPDAITYEIFIVYSC 377
M Q+GC P +YN +L LC + +A ELL+ M G +C PD ++Y I
Sbjct: 151 RRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFF 210
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ G D A+ +++M+ RG+ P + T+++ I + A + + +
Sbjct: 211 KEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCR 270
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y+ + + + P A L +M +G+ P+V Y ++ +L
Sbjct: 271 TYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYL 314
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 78/187 (41%), Gaps = 2/187 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVG--CEPITLTYNYVLGVLCKNGQDADACELLEE 356
YNIL+K +C + +LL M G C P ++Y V+ K G A E
Sbjct: 165 YNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHE 224
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
ML R P+ +TY I C+ D A MVK G+ P T+ + + GY +
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
++A ++ + Y+ L KN A+ + M K GL+P ++ Y
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344
Query: 477 VLKHLHT 483
+L+ T
Sbjct: 345 LLQGYAT 351
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 107/258 (41%), Gaps = 40/258 (15%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPI 330
AL+EM +L L M + I ++ILI ++ + +MRQ G P
Sbjct: 354 ALVEMHGLLDL--MVRNGIHPNHY---VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPD 408
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA----- 385
T+TY V+G+LCK+G+ DA E+M+ P I Y I C K+D A
Sbjct: 409 TVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELIL 468
Query: 386 -------------FN-----------------FFNQMVKRGLQPRLATHAAFIKGYFIFY 415
FN F+ MV+ G++P + T++ I GY +
Sbjct: 469 EMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAG 528
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ ++A K + + Y+ L + + K + A + EM +G+ P++ Y
Sbjct: 529 KMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYN 588
Query: 476 RVLKHLHTSHQEHMAKCL 493
+L+ L + + AK L
Sbjct: 589 IILQGLFQTRRTAAAKEL 606
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 79/183 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C + ++L++EM G T+ +N ++ CK G+ ++ +L + M+
Sbjct: 447 YNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMV 506
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD ITY I C GK D A MV G++P T+ I GY R E
Sbjct: 507 RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRME 566
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA S + Y+++ + AK + + ++G + +S Y +L
Sbjct: 567 DALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIIL 626
Query: 479 KHL 481
L
Sbjct: 627 HGL 629
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 80/178 (44%), Gaps = 6/178 (3%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V YN L+ +C+ R + M + G +P TY +L G +
Sbjct: 301 EPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHG 360
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
LL+ M+ HP+ + I I + GK D A F++M ++GL P T+ I
Sbjct: 361 LLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC 420
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLY-SLLASL--HDKNNNPVMAKNVLSEMMKNGL 467
R EDA +Y D+ S N++Y SL+ SL DK + AK ++ EM+ G+
Sbjct: 421 KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDK---AKELILEMLDRGI 475
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/184 (19%), Positives = 82/184 (44%)
Query: 295 KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
+++ Y L++ + LL M + G P ++ ++ K G+ A +
Sbjct: 338 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVF 397
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
+M + +PD +TY I C+ G+ + A +F QM+ L P + + I IF
Sbjct: 398 SKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIF 457
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+++ A + ++ D+ + ++ + H K + ++ + M++ G++P++ Y
Sbjct: 458 DKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITY 517
Query: 475 RRVL 478
++
Sbjct: 518 STLI 521
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNI+++ + + ++L V + + G + TYN +L LCKN +A + + +
Sbjct: 587 YNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 646
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
+ + T+ I I +VG+ D A + F + GL P + T++
Sbjct: 647 LTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYS 693
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 68/184 (36%), Gaps = 2/184 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI C+ + L EM G P +TYN +L L + + A A EL +
Sbjct: 552 YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT 611
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ TY I + C+ D A F + LQ T I R +
Sbjct: 612 ESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRND 671
Query: 419 DAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+A + LSA+ YSL+A + ++ M +NG N + +
Sbjct: 672 EAKDLFAALSANGLVPDVRT-YSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSI 730
Query: 478 LKHL 481
++ L
Sbjct: 731 VRKL 734
>gi|255660798|gb|ACU25568.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 418
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 86/183 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ L EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 206 VYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G A + ++M+ +GL+P T+ I G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEG 325
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A++Y + ++ Y+ L S + V A+ +L EM+ GL+P + Y
Sbjct: 326 DLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 385
Query: 476 RVL 478
++
Sbjct: 386 MII 388
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 78/181 (43%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ + + + + + + + G P +++N ++ K G + L M
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAM 197
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
PD TY + I C+ K D A F++M+ +GL P T I G+ R
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRV 257
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ A + + S + Y+ L K + A++++ EM+ GL+P+ Y +
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTL 317
Query: 478 L 478
+
Sbjct: 318 I 318
>gi|326527465|dbj|BAK08007.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 363
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 2/184 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+NILIK +C+ F LL EM + C P +TY+ ++ LC+N + +A EL E M
Sbjct: 180 FNILIKGLCQFGRFNEALSLLDEMPKQDCRPNAMTYSTLMHFLCRNCRVDEAFELFERMR 239
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
D + Y I + CR G+ A++ F M +G P T+ + G +
Sbjct: 240 KEEIDADTVVYNILVSGLCREGRVTSAYDLFKSMSSQGCHPNSGTYQVLLDGLVASKNFV 299
Query: 419 DAYKYV-VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+A V ++SA+ + S + Y LL N A +VL +M+ G P +S + ++
Sbjct: 300 EAKDLVGMMSAESLRPSFSS-YKLLIDGFCSVNCLDDAHHVLKQMVDQGFVPRMSTWTKL 358
Query: 478 LKHL 481
L L
Sbjct: 359 LTSL 362
>gi|255660780|gb|ACU25559.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 418
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 86/183 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ +L EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G A + ++M +GL+P T+ I G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEG 325
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A++Y + ++ Y+ L S + V A+ +L EM+ GL+P + Y
Sbjct: 326 DLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 385
Query: 476 RVL 478
++
Sbjct: 386 MII 388
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 75/181 (41%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ + + + + + + + P +++N ++ K G + L M
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
PD TY + I C+ K D A F++M+ GL P T I G+ R
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRV 257
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ A + + S + Y+ L K + A++++ EM GL+P+ Y +
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTL 317
Query: 478 L 478
+
Sbjct: 318 I 318
Score = 41.6 bits (96), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Query: 282 YEMAKYVIKKTERKVSY-YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
+E K +IK+ R Y LI +C+ +L EM VG +P TY ++
Sbjct: 331 FEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINE 390
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAIT 368
CK G +LL+EM C P +T
Sbjct: 391 FCKKGDVWTGSKLLKEMQRDGCMPSVVT 418
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 90/218 (41%), Gaps = 32/218 (14%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
+ YN LI + DF L EM + C P +TY ++ LCK + DA +LL+E
Sbjct: 78 AIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDE 137
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
M + C P+ TY + + C K D A +M RG P + T+ +FIKG R
Sbjct: 138 MRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDR 197
Query: 417 YEDAYKYV------------------VLSADKYKSSSNML--------------YSLLAS 444
++A K++ + + S+S ML YS L
Sbjct: 198 VDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLID 257
Query: 445 LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLH 482
K A +L M+K G RPN+ Y +L LH
Sbjct: 258 GFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALH 295
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 77/189 (40%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V YN L+ ++ R + EM C+P T+ +L LC++ Q A +
Sbjct: 4 EHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARK 63
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
LL M C PD Y I + F AF F +MVK P + T+ + G
Sbjct: 64 LLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLC 123
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
R DA K + DK S + Y+++ + AK +L EM G P+V
Sbjct: 124 KAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVV 183
Query: 473 VYRRVLKHL 481
Y +K L
Sbjct: 184 TYNSFIKGL 192
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 74/180 (41%), Gaps = 5/180 (2%)
Query: 296 VSYYNILIKEMCRRCD-FKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
V YN IK +C+ CD R L M P ++Y V+ LCK+G A +L
Sbjct: 182 VVTYNSFIKGLCK-CDRVDEARKFLARMPVT---PDVVSYTTVINGLCKSGDLDSASRML 237
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
+ M R C PD +TY I C+ G+ + A + M+K G +P + + + +
Sbjct: 238 DHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRL 297
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
A +V + + + Y+ K AK V M++ G PN S Y
Sbjct: 298 GHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSY 357
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%)
Query: 325 VGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
+G E TYN +L L + + A + +EM+ ++C PDA T+ I + CR + +
Sbjct: 1 MGYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEK 60
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLAS 444
A +M + G P A + A I GY + A+K++ + + + Y+ +
Sbjct: 61 ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120
Query: 445 LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
K A +L EM G PN+ Y +++ L + AK
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAK 167
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ LI C+ + + LL M ++GC P + YN +LG L + G A ++L
Sbjct: 249 VVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLV 308
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
EM R PD ++Y I C+ + A F++MV+RG P ++++ I ++
Sbjct: 309 EMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLY 367
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 1/132 (0%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K E V +YN+++ C+R + +M + C + +T+N ++ LC + + +D
Sbjct: 394 KICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCCNV-VTWNILVHGLCVDDRLSD 452
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A +L M+ PD +TY + C+ GK A F + VK G P + T++A I
Sbjct: 453 AETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALIT 512
Query: 410 GYFIFYRYEDAY 421
G E+AY
Sbjct: 513 GLVHENMAEEAY 524
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 94/237 (39%), Gaps = 20/237 (8%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
+L+ LG A+ ++ + ER+ V YN I +C+ K + + M +
Sbjct: 289 SLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVER 348
Query: 326 GCEP----------ITLTYNYVLGVLCKNGQDADACELLEEMLGRN-CHPDAITYEIFIV 374
GC P L Y +L LCK G+ +AC L ++L C PD Y + +
Sbjct: 349 GCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLD 408
Query: 375 YSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSS 434
C+ + D A QM+++ + T + G + R DA ++ D+
Sbjct: 409 SHCKRRQIDKALQIHKQMLEKNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIP 467
Query: 435 SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
+ Y L K A + E +K G P+V Y ++ L E+MA+
Sbjct: 468 DFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGL---VHENMAE 521
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 55/117 (47%)
Query: 283 EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLC 342
++ K +++K V +NIL+ +C +L+ M G P +TY ++ +C
Sbjct: 421 QIHKQMLEKNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMC 480
Query: 343 KNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
K G+ A A EL EE + C PD +TY I + A+ F ++V+R P
Sbjct: 481 KCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVP 537
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 120/282 (42%), Gaps = 8/282 (2%)
Query: 199 SLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAF-GFLPVLISSKALTKKGIWRVVEVL 257
++V+D + D E R+L+++ V N + F+ K L G+ ++ ++
Sbjct: 229 TIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYF--KRLDLGGVAEILTLM 286
Query: 258 NQVGGSCLVSGVRALIEMFSVLGLYEMAKYVI-----KKTERKVSYYNILIKEMCRRCDF 312
+ G +C V LI FS +G E A+ + K E V Y +I CR +
Sbjct: 287 EKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNV 346
Query: 313 KGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIF 372
K L EM G P TY ++ +CK GQ A L+ EM G+ + + +
Sbjct: 347 KRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTL 406
Query: 373 IVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYK 432
I C G D A M K+GL+ + + + G R ++A + ++
Sbjct: 407 IDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGV 466
Query: 433 SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
S + M ++ L ++ K N V AK V EM + G PN+ Y
Sbjct: 467 SPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITY 508
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 74/160 (46%), Gaps = 5/160 (3%)
Query: 292 TERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQD 347
ER VS + LI C+ +F + + EM + G P +TYN ++ K G
Sbjct: 462 VERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNM 521
Query: 348 ADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAF 407
+A +L +E+ R PD T I C GK D+A F++M +RGL P + T+ A
Sbjct: 522 KEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAM 581
Query: 408 IKGYFIFYRYEDAYK-YVVLSADKYKSSSNMLYSLLASLH 446
I G R E+A+K Y + + SL+ SLH
Sbjct: 582 ISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLH 621
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 72/173 (41%), Gaps = 2/173 (1%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIV-YSCRVG 380
M + E + VL LCK G +L++E+ + + +TY FI Y R+
Sbjct: 216 MVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLD 275
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
VA M K G+ + T+ I G+ + E+A + +K + +Y+
Sbjct: 276 LGGVA-EILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYT 334
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
+ S + ++ N A + EM GL P+ Y ++ + + Q A+ L
Sbjct: 335 SIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQML 387
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 60/139 (43%), Gaps = 5/139 (3%)
Query: 343 KNGQDADAC-ELLEEMLGRNCHPDAITYEIFIVYS--CRVGKFDVAFNFFNQMVKRGLQP 399
+ G D+C M+ N + Y + IV C+ G ++ +++ +G++
Sbjct: 201 RRGGQVDSCLRFFRRMV--NLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKA 258
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
+ T+ AFI+GYF + + L + + + + Y+LL A+ +
Sbjct: 259 NVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLF 318
Query: 460 SEMMKNGLRPNVSVYRRVL 478
EM + G+ +V VY ++
Sbjct: 319 EEMREKGIEADVYVYTSII 337
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 85/186 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ LI +C+ +L M G P T TYN ++ C GQ +A LL+
Sbjct: 238 VVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLK 297
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M G PD +TY + I Y C++G+ A + F+ MV++G +P + + GY
Sbjct: 298 KMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKG 357
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
D + L + +++L + K+ A +EM +NGLRP+V Y
Sbjct: 358 ALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYS 417
Query: 476 RVLKHL 481
V+ L
Sbjct: 418 TVIHIL 423
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 88/188 (46%), Gaps = 10/188 (5%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ LI +C ++K +L EM G P + N ++ LCK G+ +A + + ++
Sbjct: 451 FTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVI 510
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ ++Y I C VGK D + F++MV GL+P T+ A + GYF R E
Sbjct: 511 HIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVE 570
Query: 419 DA---YKYVVLSADKY--KSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
DA Y+ + K+ +S+ +L+ L + V A+ + +M+ G + +
Sbjct: 571 DALALYREMFRKDVKFCAITSNIILHGLFQA-----GRIVAARELYMKMVDRGTQLRIET 625
Query: 474 YRRVLKHL 481
Y VL L
Sbjct: 626 YNTVLGGL 633
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 3/183 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVG---CEPITLTYNYVLGVLCKNGQDADACELLE 355
YN LIK +C + +LL+ M G C P ++Y+ ++ K G+ A L +
Sbjct: 168 YNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFD 227
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM+G+ PD +TY I C+ + A M +G+ P T+ I+GY
Sbjct: 228 EMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLG 287
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ E+A + + + + Y LL + K A++V M++ G +PN ++Y
Sbjct: 288 QLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYH 347
Query: 476 RVL 478
+L
Sbjct: 348 ILL 350
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
NI++ + + R+L ++M G + TYN VLG LC+N +A + E++
Sbjct: 592 NIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRS 651
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
+ D T+ I I +VG+ D A + F+ MV RG P + T++ IK
Sbjct: 652 KEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIK 701
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 94/233 (40%), Gaps = 8/233 (3%)
Query: 254 VEVLNQVGGSCLVSGVRA---LIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKE 305
V +L ++ GS L V LI+ + +G A+ V RK + Y+IL+
Sbjct: 293 VRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHG 352
Query: 306 MCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPD 365
+ RDLL M + G +N ++ K+G A EM PD
Sbjct: 353 YATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPD 412
Query: 366 AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV 425
++Y I C++G+ + A FNQMV GL P + + + I G ++ +
Sbjct: 413 VVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAF 472
Query: 426 LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
++ + + + K V A++ ++ G++PNV Y ++
Sbjct: 473 EMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLI 525
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 54/119 (45%), Gaps = 8/119 (6%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVE----MRQVGCEPITLTYNYVLGVLCKNGQDADAC 351
V YN LI C F G D ++ M +G P + TYN +L KNG+ DA
Sbjct: 518 VVSYNTLIDGYC----FVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDAL 573
Query: 352 ELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
L EM ++ AIT I + + G+ A + +MV RG Q R+ T+ + G
Sbjct: 574 ALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGG 632
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 47/111 (42%)
Query: 286 KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNG 345
K V + T+ ++ YN ++ +C + ++R E T+N V+ L K G
Sbjct: 613 KMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVG 672
Query: 346 QDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
+ +A L M+ R P ITY + I G + + + F M K G
Sbjct: 673 RIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNG 723
>gi|255660790|gb|ACU25564.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 418
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 86/183 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ L EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 206 VYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G A + ++M+ +GL+P T+ I G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEG 325
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A++Y + ++ Y+ L S + V A+ +L EM+ GL+P + Y
Sbjct: 326 DLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 385
Query: 476 RVL 478
++
Sbjct: 386 MII 388
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 78/181 (43%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ + + + + + + + G P +++N ++ K G + L M
Sbjct: 138 FFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAM 197
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
PD TY + I C+ K D A F++M+ +GL P T I G+ R
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRV 257
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ A + + S + Y+ L K + A++++ EM+ GL+P+ Y +
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTL 317
Query: 478 L 478
+
Sbjct: 318 I 318
>gi|255660778|gb|ACU25558.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 418
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 86/183 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ +L EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G A + ++M +GL+P T+ I G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEG 325
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A++Y + ++ Y+ L S + V A+ +L EM+ GL+P + Y
Sbjct: 326 DLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 385
Query: 476 RVL 478
++
Sbjct: 386 MII 388
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 55/115 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +N L+ + D L M+ G +P TY+ ++ LCK + DA EL +
Sbjct: 171 VVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFD 230
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
EML P+ +T+ I C+ G+ D+A + QM+ + L P L T+ I G
Sbjct: 231 EMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 285
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 75/181 (41%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ + + + + + + + P +++N ++ K G + L M
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
PD TY + I C+ K D A F++M+ GL P T I G+ R
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRV 257
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ A + + S + Y+ L K + A++++ EM GL+P+ Y +
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTL 317
Query: 478 L 478
+
Sbjct: 318 I 318
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 85/187 (45%), Gaps = 5/187 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y + I +C+ + +L +M + GC P +++N V+ LCK + +A LL M
Sbjct: 221 YTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGME 280
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C P+AI++ I CR GK+ A F +M+KRG++P + T+ + G R E
Sbjct: 281 AKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDG-LCKARQE 339
Query: 419 DAYKYVVLSAD----KYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
K + D K + + YS L K A+ +L M G PNV Y
Sbjct: 340 GRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTY 399
Query: 475 RRVLKHL 481
++ L
Sbjct: 400 NSLISGL 406
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 3/160 (1%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
MR+ G P +TYN +L LC G+ +DA L E M+ PD +TY + C+VG+
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
D A F+ VKRG P + T+ A I G+ + ++A + + + + Y+
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
L + KN A+ ++ + G PNV Y ++ L
Sbjct: 121 LVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGL 157
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 9/201 (4%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQV---GCEPITLTYNYVLGVLCKNGQDADACE 352
V Y+ LI +CR + +G + L V G EP TYN ++ L K + +A E
Sbjct: 147 VITYSTLISGLCR--ELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFE 204
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
L ++ PDAITY +FI C+ G+ + A M ++G P + +H A I G
Sbjct: 205 LFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLC 264
Query: 413 IFYRYEDAYKYVVLSADKYK--SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
R ++A V+LS + K S + + ++ L + A EM+K G++P
Sbjct: 265 KEKRVDEAE--VLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPT 322
Query: 471 VSVYRRVLKHLHTSHQEHMAK 491
V Y ++ L + QE K
Sbjct: 323 VVTYNILVDGLCKARQEGRIK 343
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 81/184 (44%), Gaps = 4/184 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ +C + L M + G P +TYN +L CK G+ +A ++ + +
Sbjct: 13 YNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAV 72
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R PD +TY I C+ K D A +MV L P + T+ + + G R +
Sbjct: 73 KRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVD 132
Query: 419 DAYKYVVLSADKYKSSSNMLYS-LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+A +V DK S + + YS L++ L + A + ++K G P V Y +
Sbjct: 133 EARMLIV---DKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNIL 189
Query: 478 LKHL 481
+ L
Sbjct: 190 IDGL 193
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 3/149 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA---DACELLE 355
+N LI CR +K EM + G +P +TYN ++ LCK Q+ +A L +
Sbjct: 291 FNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFD 350
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+ + PD +TY I + GK D A M +G P + T+ + I G
Sbjct: 351 AMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLE 410
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLAS 444
+ ++A + V +K + Y + S
Sbjct: 411 KVDEALELFVAMVEKGCVPDTITYGTIIS 439
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 58/129 (44%), Gaps = 6/129 (4%)
Query: 283 EMAKYVIKKTERKVSYYNILIKEMCR---RCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
EM K +K T V YNIL+ +C+ K L M + G P +TY+ ++
Sbjct: 313 EMLKRGVKPT---VVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALID 369
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
L K G+ DA LL M + C P+ TY I C + K D A F MV++G P
Sbjct: 370 GLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVP 429
Query: 400 RLATHAAFI 408
T+ I
Sbjct: 430 DTITYGTII 438
>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
Length = 420
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 122/268 (45%), Gaps = 15/268 (5%)
Query: 231 KAFGFLPVLISSKAL-----TKKGIWRVVEVLNQVGGSCLVSGV---RALIEMFSVLGLY 282
+A GF P +++ L T + +++L+++ + ALI+ G
Sbjct: 153 QARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEV 212
Query: 283 EMAKYVIKKTERK-------VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYN 335
E A V+K+ + + V Y LI +C++ F+ + L EM GC P TY
Sbjct: 213 ERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYT 272
Query: 336 YVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR 395
++ LC+ G +A LL EM+ C D + Y I C++G+ D A MV++
Sbjct: 273 ALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEK 332
Query: 396 GLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMA 455
G+ P + T+ + I+G ++A + K +++ Y+ L + + + A
Sbjct: 333 GVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHA 392
Query: 456 KNVLSEMMKNGLRPNVSVYRRVLKHLHT 483
+++EM NGL P +Y+ + K L++
Sbjct: 393 LQLVNEMKSNGLMPAGDIYKILFKSLYS 420
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 6/198 (3%)
Query: 288 VIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQD 347
++ + V Y+ I +C++ ++ EM + G P + TYN ++ LCK+ Q
Sbjct: 83 LLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQL 142
Query: 348 ADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAF 407
L++EM R P +TY I C G+ D A + ++M RG+ P T+ A
Sbjct: 143 EMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTAL 202
Query: 408 IKGYFIFYRYEDAYKYVVLSADKYKSS----SNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
I+G E A +VL K + + + + Y+ L + M L EM+
Sbjct: 203 IQGLCDCGEVERA--ILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMI 260
Query: 464 KNGLRPNVSVYRRVLKHL 481
+G PN + Y ++ L
Sbjct: 261 ISGCFPNNATYTALIHGL 278
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 155/364 (42%), Gaps = 21/364 (5%)
Query: 131 KQVSEIIELL-RSGDSETESKLLSMSVSLSNASVIEILRVLNSEKVSALCFLKYMREIMP 189
++V E +E+ + E+ L+ V N + + +V E+ L ++ MR P
Sbjct: 354 RRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEE--GLGLVERMRS-QP 410
Query: 190 EFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKG 249
N+ + +ID + E R+L + N V N L + K G
Sbjct: 411 RCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTL-----VDGMCKHG 465
Query: 250 -IWRVVEVLNQVGGSCLVSGV---RALIEMFSVLGLYEMAKYVIKK------TERKVSYY 299
I VE N++ G L ALI F + E A + + + + YY
Sbjct: 466 RINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYY 525
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
LI + + +L +M++ G P +++N ++ C+ + +A E+L+EM
Sbjct: 526 T-LISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMEN 584
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
PD +TY I + + G F A +MVK GL P + T+ A I Y + ++
Sbjct: 585 AGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDE 644
Query: 420 AYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A K + +S+ + ++Y++L + + N +A +++ +M G++PN + + +
Sbjct: 645 AMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMF 704
Query: 479 KHLH 482
K L
Sbjct: 705 KGLQ 708
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 127/353 (35%), Gaps = 78/353 (22%)
Query: 176 SALCFLKYMREIMPEFYKNSDICSLVI------DNCGRLDDYETMRQLLNDFNVYQVCLN 229
AL L M + EF NS+ +V D GR D E + L++ F ++V N
Sbjct: 210 DALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPN 269
Query: 230 EKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVI 289
L + T + W V+ L ++GG ++E S
Sbjct: 270 SIWLTQLISRLCRSGRTDRA-WDVLHGLMKLGG---------VMEAASC----------- 308
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
N L+ + R +FK LL EM+++ +P +T+ ++ LCK + +
Sbjct: 309 ----------NALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDE 358
Query: 350 ACELLEEMLGRN-----CHPDAITYEIFIVYSCRVGK----------------------- 381
A E+ E+M G PD ITY I C+VG+
Sbjct: 359 ALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVT 418
Query: 382 -------------FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSA 428
+ A F+QM K G+ P + T + G R A ++
Sbjct: 419 YNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQ 478
Query: 429 DKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K + + Y+ L NN A + EM++ G P+ VY ++ L
Sbjct: 479 GKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGL 531
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNILI +CR+ L+ +M+ G +P T T+N + L + + A EL++ M
Sbjct: 665 YNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMT 724
Query: 359 GRNCHPDAITYEIFIVYSCRVGK 381
C+PD IT EI + VG+
Sbjct: 725 EHACNPDYITMEILTEWLSAVGE 747
>gi|414587035|tpg|DAA37606.1| TPA: hypothetical protein ZEAMMB73_100135 [Zea mays]
Length = 547
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 96/191 (50%), Gaps = 9/191 (4%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +N++IK +CR +F+ +L+ M + GC P T+T+N ++ LC+ Q E+L
Sbjct: 215 VWSFNVVIKGVCRMGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLR 274
Query: 356 EMLGRN--CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
L R+ C P+A+TY I C+ GK + A + +N M++ G +P T+ I GY
Sbjct: 275 R-LQRDGVCMPNAVTYTSVISGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVLINGYGK 333
Query: 414 FYRYEDA---YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
E A Y+ ++L ++ + +S L + + AK + EM + ++PN
Sbjct: 334 ALDMESAVRMYRQLIL---RHCPPDVVTFSSLIDGYCRCGQLDDAKRIWKEMGLHHIQPN 390
Query: 471 VSVYRRVLKHL 481
V + ++ L
Sbjct: 391 VYTFSIIIHSL 401
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 74/144 (51%), Gaps = 6/144 (4%)
Query: 271 ALIEMFSVLGLYEMAKYVIKK-----TERKVSYYNILIKEMCRRCDFKGPRDLLVEMR-Q 324
+LI+ + G + AK + K+ + V ++I+I +C++ D+L E+ +
Sbjct: 361 SLIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNRSAEALDILRELNMR 420
Query: 325 VGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
P T YN V+ +LCK G+ +A ++ +M + CHPD TY I I+ C G+
Sbjct: 421 TDIAPQTFIYNPVIDILCKGGKVDEANLIVTDMKEKGCHPDKYTYTILIIGHCMKGRIPE 480
Query: 385 AFNFFNQMVKRGLQPRLATHAAFI 408
A F++MV+ G +P T +F+
Sbjct: 481 AITLFHKMVEAGCRPDNITVNSFV 504
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 83/185 (44%), Gaps = 2/185 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVG-CEPITLTYNYVLGVLCKNGQDADACELLEEM 357
+NIL+ +CR ++L +++ G C P +TY V+ CK G+ DA + +M
Sbjct: 253 HNILVDGLCRAKQVNKGHEVLRRLQRDGVCMPNAVTYTSVISGYCKAGKMEDAMSVYNDM 312
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
L P+ +TY + I + + A + Q++ R P + T ++ I GY +
Sbjct: 313 LESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRHCPPDVVTFSSLIDGYCRCGQL 372
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM-MKNGLRPNVSVYRR 476
+DA + + + +S++ K N A ++L E+ M+ + P +Y
Sbjct: 373 DDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNRSAEALDILRELNMRTDIAPQTFIYNP 432
Query: 477 VLKHL 481
V+ L
Sbjct: 433 VIDIL 437
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 2/159 (1%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH-PDAITYEIFIVYS 376
LL + ++GC YNY+L L +G+ DA L E + + PD ++ + I
Sbjct: 166 LLTKGSRLGCCIEPYAYNYLLNSLIAHGRAQDAVALFESWIQDGLYSPDVWSFNVVIKGV 225
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV-VLSADKYKSSS 435
CR+G F A +M + G P TH + G + ++ + L D +
Sbjct: 226 CRMGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRLQRDGVCMPN 285
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ Y+ + S + K A +V ++M+++G RPN Y
Sbjct: 286 AVTYTSVISGYCKAGKMEDAMSVYNDMLESGTRPNTVTY 324
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 74/177 (41%), Gaps = 1/177 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +I C+ + + +M + G P T+TYN ++ K A + +++
Sbjct: 289 YTSVISGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLI 348
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R+C PD +T+ I CR G+ D A + +M +QP + T + I R
Sbjct: 349 LRHCPPDVVTFSSLIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNRSA 408
Query: 419 DAYKYV-VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+A + L+ + +Y+ + + K A ++++M + G P+ Y
Sbjct: 409 EALDILRELNMRTDIAPQTFIYNPVIDILCKGGKVDEANLIVTDMKEKGCHPDKYTY 465
>gi|255660786|gb|ACU25562.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 418
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 86/183 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ +L EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G A + ++M +GL+P T+ I G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEG 325
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A++Y + ++ Y+ L S + V A+ +L EM+ GL+P + Y
Sbjct: 326 DLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 385
Query: 476 RVL 478
++
Sbjct: 386 MII 388
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 55/115 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +N L+ + D L M+ G +P TY+ ++ LCK + DA EL +
Sbjct: 171 VVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFD 230
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
EML P+ +T+ I C+ G+ D+A + QM+ + L P L T+ I G
Sbjct: 231 EMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 285
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 75/181 (41%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ + + + + + + + P +++N ++ K G + L M
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
PD TY + I C+ K D A F++M+ GL P T I G+ R
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRV 257
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ A + + S + Y+ L K + A++++ EM GL+P+ Y +
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTL 317
Query: 478 L 478
+
Sbjct: 318 I 318
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 2/178 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQ-VGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
YN +I C R + +++ EMR+ G P TY ++ CK G+ DA ++ +EM
Sbjct: 150 YNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEM 209
Query: 358 LGRN-CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
L + P A+ Y I C GK DVA + MV+RG+ +AT+ + F+ R
Sbjct: 210 LTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGR 269
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
DAY + S Y++L + + K N A V EM + G+R Y
Sbjct: 270 ASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTY 327
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 104/241 (43%), Gaps = 13/241 (5%)
Query: 255 EVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRR 309
E + Q G + V+ L+ + G A V+++ +R V YNILI C+
Sbjct: 243 EDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKE 302
Query: 310 CDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITY 369
+ K ++ EM + G +TY ++ + GQ + L + + + PD + Y
Sbjct: 303 GNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMY 362
Query: 370 EIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSAD 429
I C G + AF +M K+ + P T+ I+G+ + R ++A + ++
Sbjct: 363 NALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEA-RGLIDEMT 421
Query: 430 KYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHM 489
K ++ KN A+N++ EM+ G+ P+ S Y +++ L T ++
Sbjct: 422 KRGIQPDLGLC-------KNGQGDDAENLMKEMVGKGITPDDSTYISLIEGLTTVDEQMS 474
Query: 490 A 490
A
Sbjct: 475 A 475
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN 390
T T+N +L LC G+ A ELL +M P+A+TY I C G+ A
Sbjct: 116 TTTFNIMLRHLCATGKPVRALELLRQM----PRPNAVTYNTVIAGFCARGRVQAALEVMR 171
Query: 391 QMVKR-GLQPRLATHAAFIKGYFIFYRYEDAYKYV--VLSADKYKSSSNMLYSLLASLHD 447
+M +R G+ P T+A I G+ R EDA K +L+ + S+ M +L+ D
Sbjct: 172 EMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCD 231
Query: 448 KNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ V A +M++ G+ V+ Y
Sbjct: 232 RGKLDV-ALQYREDMVQRGVAMTVATY 257
>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 643
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 42/212 (19%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL---- 354
YN+L++ +C+ R +L EM + GC P +TY ++ VLCK + +A E+L
Sbjct: 162 YNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMP 221
Query: 355 --------------------------EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
+M+GR P+ ITY + C+ G+ +A
Sbjct: 222 PVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAI 281
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA---YKYVVLSADKYKSSS---NMLYSLL 442
+MV G P + T A ++G F R DA ++++V A+ + S+ N+L L
Sbjct: 282 LARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMV--AEGWAPSTVSYNILIRGL 339
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
S+ D A ++L+ M ++G PNV Y
Sbjct: 340 CSVGDLKG----ASSILNSMEQHGCFPNVRTY 367
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 5/169 (2%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
MR+ G P TYN ++ LC+N + A ++L+EM + C PD +TY + C++ +
Sbjct: 150 MRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDR 209
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
D A M P A++ A + +R ++ + V + + + Y+
Sbjct: 210 LDEATEVLAAM-----PPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTT 264
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
+ K MA +L+ M+ G PNV + +++ L + H A
Sbjct: 265 IVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDA 313
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 90/204 (44%), Gaps = 2/204 (0%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPIT 331
++ + L + A V+ + YN ++ +CR + ++ +M G +P
Sbjct: 200 IVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNV 259
Query: 332 LTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQ 391
+TY ++ CK G+ AC +L M+ C P+ +T+ + G+ A + +
Sbjct: 260 ITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRW 319
Query: 392 MVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM-LYSLLASLHDKNN 450
MV G P ++ I+G + A ++ S +++ N+ YS L K
Sbjct: 320 MVAEGWAPSTVSYNILIRGLCSVGDLKGA-SSILNSMEQHGCFPNVRTYSTLIDGFSKAG 378
Query: 451 NPVMAKNVLSEMMKNGLRPNVSVY 474
+ A ++ ++M ++G +PNV VY
Sbjct: 379 DLGGAISIWNDMSRSGCKPNVVVY 402
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 76/183 (41%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ LI + D G + +M + GC+P + Y ++ V CK A L++
Sbjct: 364 VRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLID 423
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML NC P+ +T+ I C + A F++M + G P T+ I G F
Sbjct: 424 KMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREG 483
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
DA V S + Y+ + S + A + +M+ G++PN +
Sbjct: 484 NCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFS 543
Query: 476 RVL 478
++
Sbjct: 544 AII 546
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 96/233 (41%), Gaps = 21/233 (9%)
Query: 274 EMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLT 333
E+FSV+ + V + + V Y ++ C+ + + +L M GC P +T
Sbjct: 242 EVFSVV-----SDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVT 296
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
+ ++ L +G+ DA ++ M+ P ++Y I I C VG A + N M
Sbjct: 297 FTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSME 356
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN---MLYSLLASLHDKNN 450
+ G P + T++ I G F + D + + D +S ++Y+ + + K
Sbjct: 357 QHGCFPNVRTYSTLIDG---FSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKL 413
Query: 451 NPVMAKNVLSEMMKNGLRPNVSVY----------RRVLKHLHTSHQEHMAKCL 493
AK+++ +M+ PN + RRV + L H+ C+
Sbjct: 414 MFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCV 466
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 11/216 (5%)
Query: 272 LIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNILIKEMCRRCDFKGPRDLLV--EMRQ 324
++++F ++ AK +I K +N LI+ +C C G R L V EMR+
Sbjct: 405 MVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCD-CRRVG-RALGVFHEMRR 462
Query: 325 VGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
GC P TYN ++ L + G DA ++ EM +TY + C+
Sbjct: 463 HGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSRE 522
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML-YSLLA 443
A F +M+ +G+QP T +A I Y A +++ + + N+L Y++L
Sbjct: 523 AMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMA-AWMLGAMNVVNCHRNILVYTILM 581
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
+ + V A L +M+ G+ PN + +++
Sbjct: 582 AELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVR 617
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 52/120 (43%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E + YN ++ +C+ + + +M G +P T++ ++ CK G+ A
Sbjct: 501 ELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAW 560
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+L M NCH + + Y I + C K A + +M+ G+ P T ++G F
Sbjct: 561 MLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVF 620
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 1/166 (0%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
+L E++++G P T+ YN ++G C+ + E+L+EM PD ITY I Y+
Sbjct: 546 VLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYAS 605
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSN 436
+ G A +M+K G+ P +AT+ A I Y + +A + + + A +
Sbjct: 606 KNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNT 665
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLH 482
++Y++L + KNN A +++ +M G+ PN + Y + K L
Sbjct: 666 VIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLR 711
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 82/183 (44%), Gaps = 2/183 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI C+ + + ++L EM + G P +T N ++G +C+ G+ + A E
Sbjct: 422 YNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQ 481
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R DA+TY I C V F+ A FN+M+K G P + I G+ R
Sbjct: 482 RRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMA 541
Query: 419 DAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
DA +V+ K + + Y+ L + N +L EM + GL+P+ Y +
Sbjct: 542 DA-SFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTL 600
Query: 478 LKH 480
+ +
Sbjct: 601 IAY 603
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 89/212 (41%), Gaps = 5/212 (2%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI+ F G E K + + ++ V N L+ MCR + VE ++ G
Sbjct: 425 LIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRG 484
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
+ +TY ++ C A EL EML C PDAI Y I + G+ A
Sbjct: 485 MKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADAS 544
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
++ K G++P + I G+ ++ ++ + + + Y+ L +
Sbjct: 545 FVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYA 604
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
KN + A+ V+ +M+K G+ P V+ Y V+
Sbjct: 605 SKNGDLKFAQKVMRKMIKAGVVPTVATYGAVI 636
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNILI +C+ K L+ +M+ G P T TYN + L E ++ M+
Sbjct: 668 YNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMI 727
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFD 383
C+PD IT EI + VG+ +
Sbjct: 728 EHACNPDYITMEILTEWLSAVGEIE 752
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 91/275 (33%), Gaps = 83/275 (30%)
Query: 283 EMAKYVIKKTERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQVGC----------- 327
E+ V+K E V + LI +CR DL EM ++G
Sbjct: 253 EIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLL 312
Query: 328 ------------------------EPITLTYNYVLGVLCKNGQDADACELLEEMLG---- 359
+P +T+ ++ +CK + DA E+LE+M G
Sbjct: 313 TGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKES 372
Query: 360 ----------------------------------------RNCHPDAITYEIFIVYSCRV 379
+ C PD ITY I C+
Sbjct: 373 GGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKA 432
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
G+ + F++M K G+ P + T + G R A + V + + + Y
Sbjct: 433 GEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTY 492
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ L + NN A + +EM+K+G P+ VY
Sbjct: 493 TALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVY 527
>gi|255576901|ref|XP_002529336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531207|gb|EEF33053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 610
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 77/147 (52%), Gaps = 4/147 (2%)
Query: 263 SCLVSGVRALIEMFSVLG-LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
S L+SG+ + V G L EM +K + YN++I C+ DF+ +L E
Sbjct: 262 STLISGLFKVGRKDEVFGVLMEME---LKGCKADTVTYNVMINGFCKDKDFETAYKILDE 318
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M + C+P ++YN +LG LCK+G+ ++A +L E+M R C PD ++Y I +
Sbjct: 319 MMENRCKPDVISYNVILGELCKDGKWSEASDLFEDMPRRGCAPDVVSYRIVFDGLSDAME 378
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFI 408
F A ++MV +G PR ++ FI
Sbjct: 379 FKDAAFILDEMVFKGFAPRSSSICKFI 405
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 24/228 (10%)
Query: 206 GRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSC- 264
GR+DD ++L++ + N+ FG L + L K +++ + + V G C
Sbjct: 166 GRVDD---ALKVLDEMKNRDLVPNQVTFGTL-IYGLCLNLKLKEAFKLKDYMVNVHGLCP 221
Query: 265 -------LVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFK-GPR 316
L+ G+ A+ E+ L L E + K + + Y+ LI + FK G +
Sbjct: 222 NEYVYATLIKGLCAVGELSFALRLKEEMERDGVKVDSAI--YSTLISGL-----FKVGRK 274
Query: 317 D----LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIF 372
D +L+EM GC+ T+TYN ++ CK+ A ++L+EM+ C PD I+Y +
Sbjct: 275 DEVFGVLMEMELKGCKADTVTYNVMINGFCKDKDFETAYKILDEMMENRCKPDVISYNVI 334
Query: 373 IVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
+ C+ GK+ A + F M +RG P + ++ G ++DA
Sbjct: 335 LGELCKDGKWSEASDLFEDMPRRGCAPDVVSYRIVFDGLSDAMEFKDA 382
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 105/245 (42%), Gaps = 45/245 (18%)
Query: 273 IEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITL 332
++MF + LY + +R + YN L+ + +F R+ V +++ +P
Sbjct: 103 LKMFDEMPLY--------RCQRTIKSYNTLLNVLMICKEFDVMREHFVNIKR-HVKPDGC 153
Query: 333 TYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFI------------------- 373
T+N ++ LC +G+ DA ++L+EM R+ P+ +T+ I
Sbjct: 154 TFNIMIRGLCSDGRVDDALKVLDEMKNRDLVPNQVTFGTLIYGLCLNLKLKEAFKLKDYM 213
Query: 374 -----------VYS------CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
VY+ C VG+ A +M + G++ A ++ I G F R
Sbjct: 214 VNVHGLCPNEYVYATLIKGLCAVGELSFALRLKEEMERDGVKVDSAIYSTLISGLFKVGR 273
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
++ + ++ K + + Y+++ + K+ + A +L EMM+N +P+V Y
Sbjct: 274 KDEVFGVLMEMELKGCKADTVTYNVMINGFCKDKDFETAYKILDEMMENRCKPDVISYNV 333
Query: 477 VLKHL 481
+L L
Sbjct: 334 ILGEL 338
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 12/151 (7%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+++ E+C+ + DL +M + GC P ++Y V L + DA +L+EM+
Sbjct: 331 YNVILGELCKDGKWSEASDLFEDMPRRGCAPDVVSYRIVFDGLSDAMEFKDAAFILDEMV 390
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK-RGLQPRLATHAAFIKGYFIFYRY 417
+ P + + FI C+ G D+ ++ N + K + L A +
Sbjct: 391 FKGFAPRSSSICKFINRLCQNGDEDLVWSVLNCLGKINAIDTELWKMAIAV--------- 441
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
A K +LS+ KY+ + LA+L K
Sbjct: 442 --ALKNSMLSSPKYQEQQKFFENCLATLQRK 470
>gi|255660812|gb|ACU25575.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 418
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 86/183 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ +L EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G A + ++M +GL+P T+ I G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEG 325
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A++Y + ++ Y+ L S + V A+ +L EM+ GL+P + Y
Sbjct: 326 HLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 385
Query: 476 RVL 478
++
Sbjct: 386 MII 388
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 80/195 (41%), Gaps = 6/195 (3%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ + + + + + + + G P +++N ++ K G + L M
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGNLDEGFRLKNAM 197
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
PD TY + I C+ K D A F++M+ GL P T I G+ R
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRV 257
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ A + + S + Y+ L K + A+++ EM GL+P+ Y +
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTL 317
Query: 478 LK------HLHTSHQ 486
+ HL T+ +
Sbjct: 318 IDGSCKEGHLETAFE 332
>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 109/250 (43%), Gaps = 12/250 (4%)
Query: 244 ALTKKGIW-RVVEVLNQVGGSCLVS------GVRALIEMFSVLGLYEMAKYV-----IKK 291
+ ++G++ R +E N V G+ VS +I+ +GL + A V I+K
Sbjct: 170 VIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRK 229
Query: 292 TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADAC 351
E V Y L+ +C+ LL EM+ GC P +T+N ++ LCK G + A
Sbjct: 230 CEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAA 289
Query: 352 ELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
+L++ M + C P+ +TY I C GK + A + ++MV P + T+ I G
Sbjct: 290 KLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGL 349
Query: 412 FIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
R D + L ++ + +YS L S K A ++ EM G N
Sbjct: 350 VKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNT 409
Query: 472 SVYRRVLKHL 481
VY V+ L
Sbjct: 410 IVYSAVIDGL 419
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 126/288 (43%), Gaps = 30/288 (10%)
Query: 223 VYQVCLN---EKAFGFLPVLISSKALTKKGIW-RVVEVLNQVGGSCLVSGVRALIE---- 274
++ +CL EKA L ++SSK + + ++ L + G + + V AL+E
Sbjct: 311 IHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGY 370
Query: 275 -----MFSVL--GLYEMAK----------YVIKKTERKVSYYNILIKEMCRRCDFKGPRD 317
++S L GL++ K +K E Y+ +I +CR +
Sbjct: 371 CVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVE 430
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
+L EM GC P T + ++ + G A E+ ++M N + + Y + I C
Sbjct: 431 VLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLC 490
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV--VLSADKYKSSS 435
+ GK A + QM+ +G +P + +++ I G I EDA + +L
Sbjct: 491 KDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPD 550
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV---SVYRRVLKH 480
+ Y++L + K ++ A ++L+ M+ G P++ +++ R+L+
Sbjct: 551 VVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRMLRE 598
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 6/152 (3%)
Query: 333 TYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
Y+ ++ L K G+ +A L +EM + + I Y I CR GK D A ++M
Sbjct: 376 VYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEM 435
Query: 393 VKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYK---SSSNMLYSLLASLHDKN 449
+G P T ++ +KG+F ++++ V + D K + + + YS+L K+
Sbjct: 436 TNKGCTPNAYTCSSLMKGFF---EAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKD 492
Query: 450 NNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A V ++M+ G +P+V Y ++ L
Sbjct: 493 GKVKEAMMVWTQMLGKGCKPDVVAYSSMINGL 524
>gi|413936133|gb|AFW70684.1| hypothetical protein ZEAMMB73_229858 [Zea mays]
Length = 375
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 90/227 (39%), Gaps = 35/227 (15%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN++I MCR D R+LL + C+P T+ YN VL C + DA E+L+E++
Sbjct: 13 YNVIIDAMCREGDVDQARELLNSLPSRSCKPNTVNYNTVLKGFCSIERWVDANEILDEVV 72
Query: 359 GRNCHP-----------------------------------DAITYEIFIVYSCRVGKFD 383
NC P + +TY I C G D
Sbjct: 73 SENCPPNEATLNVTINTLCRKGLLQKVTRYLEKMSKHGCTTNVVTYNAIIGGLCEQGNVD 132
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
A + M G +P + T+ +KG R+EDA + ++ + + N ++ +
Sbjct: 133 SALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLRDNSTFNTII 192
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
S + + A V +M + G PN + Y ++ L + + A
Sbjct: 193 SFWCQKGLILQALEVFKQMPEKGCNPNSTTYSTIIGGLVKASKMEQA 239
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 88/186 (47%), Gaps = 1/186 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN +I +C + + +LL M+ GC+P +TYN VL LC + DA EL+
Sbjct: 115 VVTYNAIIGGLCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMI 174
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M + D T+ I + C+ G A F QM ++G P T++ I G
Sbjct: 175 KMSQNDRLRDNSTFNTIISFWCQKGLILQALEVFKQMPEKGCNPNSTTYSTIIGGLVKAS 234
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ E A + + A+K ++ M L SL+ ++ + + V+ ++ +G+ P +Y
Sbjct: 235 KMEQALELLNEMANKGFNTDKMYLVLTKSLNKEDKIEEVVQ-VVHKLQDSGISPQTVLYN 293
Query: 476 RVLKHL 481
VL L
Sbjct: 294 TVLLGL 299
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 2/178 (1%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
MR GCEP +TYN ++ +C+ G A ELL + R+C P+ + Y + C + +
Sbjct: 1 MRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRSCKPNTVNYNTVLKGFCSIER 60
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML-YS 440
+ A +++V P AT I + +Y+ K+ ++N++ Y+
Sbjct: 61 WVDANEILDEVVSENCPPNEATLNVTINTLCRKGLLQKVTRYLE-KMSKHGCTTNVVTYN 119
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYS 498
+ + N A +LS M G +P++ Y VLK L ++ + A+ L + S
Sbjct: 120 AIIGGLCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMS 177
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +L K + + + ++ +++ G P T+ YN VL LC+NG+ A ++L +M+
Sbjct: 257 YLVLTKSLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTNYAIDVLADMV 316
Query: 359 GRNCHPDAITYEIFI 373
C PD TY I I
Sbjct: 317 SCGCMPDESTYIILI 331
>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
Length = 1096
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 95/207 (45%), Gaps = 5/207 (2%)
Query: 266 VSGVRALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLV 320
V+ LI + G +E + Y+++K E+ + YN ++ C++ FK +LL
Sbjct: 193 VATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLD 252
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
M+ G + TYN ++ LC++ + A LL +M R HP+ +TY I G
Sbjct: 253 HMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEG 312
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
K +A N+M+ GL P T A I G+ +++A K + K + S + Y
Sbjct: 313 KVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYG 372
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGL 467
+L KN +A+ M +NG+
Sbjct: 373 VLLDGLCKNAEFDLARGFYMRMKRNGV 399
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 82/184 (44%), Gaps = 4/184 (2%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
S Y+ILI+ R + ++ M G P T N +LG + K+G+D L+E
Sbjct: 124 SVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKE 183
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
ML R PD T+ I I C G F+ + +M K G P + T+ + Y R
Sbjct: 184 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 243
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKN--VLSEMMKNGLRPNVSVY 474
++ A + + K + Y++L +HD + +AK +L +M K + PN Y
Sbjct: 244 FKAAIELLDHMKSKGVDADVCTYNML--IHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 301
Query: 475 RRVL 478
++
Sbjct: 302 NTLI 305
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 53/110 (48%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +L+ +C+ +F R + M++ G +TY ++ LCKNG +A LL EM
Sbjct: 371 YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMS 430
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
PD +TY I C+VG+F A ++ + GL P ++ I
Sbjct: 431 KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 480
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 85/198 (42%), Gaps = 18/198 (9%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+K +C+ + L + V T+ YN +L +CK+G A A L EM+
Sbjct: 581 YGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMV 640
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG-LQPRLATHAAFIKGYFIFYRY 417
R+ PD+ TY I CR GK +A F + RG + P + F+ G F ++
Sbjct: 641 QRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQW 700
Query: 418 EDAYKYVVLSADKYKSSSNML--------YSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
+ A Y D + +++ YS + + N ++L EM P
Sbjct: 701 K-AGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTN-------DLLPEMGNQNGGP 752
Query: 470 NVSVYRRVLKHLHTSHQE 487
N++ Y +L H ++ ++
Sbjct: 753 NLTTY-NILLHGYSKRKD 769
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 5/216 (2%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI F +G ++ AK ++ + R Y+ LI CR K + M
Sbjct: 443 ALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILE 502
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G T+N ++ LCK G+ A+A E + M P+ ++++ I G+ A
Sbjct: 503 GHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKA 562
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
F+ F++M K G P T+ + +KG +A K++ + ++Y+ L +
Sbjct: 563 FSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTA 622
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K+ N A ++ EM++ + P+ Y ++ L
Sbjct: 623 MCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 658
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 88/227 (38%), Gaps = 41/227 (18%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K + V YN+LI ++CR LL +MR+ P +TYN ++ G+
Sbjct: 257 KGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLI 316
Query: 350 ACELLEEML-----------------------------------GRNCHPDAITYEIFIV 374
A +LL EML + P ++Y + +
Sbjct: 317 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLD 376
Query: 375 YSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSS 434
C+ +FD+A F+ +M + G+ T+ I G ++A VVL + K
Sbjct: 377 GLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEA---VVLLNEMSKDG 433
Query: 435 SN---MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ + YS L + K AK ++ + + GL PN +Y ++
Sbjct: 434 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 480
Score = 42.4 bits (98), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 41/93 (44%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
LL M ++ P ++ ++ + CKNG +A EL M D ++Y + I C
Sbjct: 951 LLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLC 1010
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
G +AF + +M G T+ A I+G
Sbjct: 1011 AKGDMALAFELYEEMKGDGFLANATTYKALIRG 1043
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 58/131 (44%)
Query: 279 LGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
+GL + ++ + E +N+LI + C + DL+ M +G T + ++
Sbjct: 807 IGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMV 866
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
VL +N + ++ +L EM + P++ Y I CRVG AF +M+ +
Sbjct: 867 SVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKIC 926
Query: 399 PRLATHAAFIK 409
P +A ++
Sbjct: 927 PPNVAESAMVR 937
>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 647
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 96/215 (44%), Gaps = 42/215 (19%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL- 354
V YN+L++ +C+ R +L EM + GC P +TY ++ VLCK + +A E+L
Sbjct: 163 VFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLA 222
Query: 355 -----------------------------EEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
+M+GR P+ ITY + C+ G+ +A
Sbjct: 223 AMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMA 282
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA---YKYVVLSADKYKSSS---NMLY 439
+MV G P + T A ++G F R DA ++++V A+ + S+ N+L
Sbjct: 283 CAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMV--AEGWAPSTVSYNILI 340
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
L S+ D A ++L+ M ++G PNV Y
Sbjct: 341 RGLCSVGDLKG----ASSILNSMEQHGCFPNVRTY 371
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 91/202 (45%), Gaps = 9/202 (4%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVE-MRQVGCEPITLTYNYVLGVLCKNGQDA 348
+ TE ++ YN LI + R + G L+ + MR+ G P TYN ++ LC+N +
Sbjct: 124 RPTEPRL--YNHLIDALLRE-NMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVG 180
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
A ++L+EM + C PD +TY + C++ + D A M P A++ A +
Sbjct: 181 AARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM-----PPVAASYNAIV 235
Query: 409 KGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLR 468
+R ++ + V + + + Y+ + K MA +L+ M+ G
Sbjct: 236 LALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCT 295
Query: 469 PNVSVYRRVLKHLHTSHQEHMA 490
PNV + +++ L + H A
Sbjct: 296 PNVVTFTALVRGLFDDGRVHDA 317
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 90/204 (44%), Gaps = 2/204 (0%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPIT 331
++ + L + A V+ + YN ++ +CR + ++ +M G +P
Sbjct: 204 IVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNV 263
Query: 332 LTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQ 391
+TY ++ CK G+ AC +L M+ C P+ +T+ + G+ A + +
Sbjct: 264 ITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRW 323
Query: 392 MVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM-LYSLLASLHDKNN 450
MV G P ++ I+G + A ++ S +++ N+ YS L K
Sbjct: 324 MVAEGWAPSTVSYNILIRGLCSVGDLKGA-SSILNSMEQHGCFPNVRTYSTLIDGFSKAG 382
Query: 451 NPVMAKNVLSEMMKNGLRPNVSVY 474
+ A ++ ++M ++G +PNV VY
Sbjct: 383 DLGGAISIWNDMSRSGCKPNVVVY 406
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 79/195 (40%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ LI + D G + +M + GC+P + Y ++ V CK A L++
Sbjct: 368 VRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLID 427
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML NC P+ +T+ I C + A F++M + G P T+ I G F
Sbjct: 428 KMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREG 487
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
DA V S + Y+ + S + A + +M+ G++PN +
Sbjct: 488 NCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFS 547
Query: 476 RVLKHLHTSHQEHMA 490
++ + MA
Sbjct: 548 AIIHAYCKEGEVRMA 562
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 96/233 (41%), Gaps = 21/233 (9%)
Query: 274 EMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLT 333
E+FSV+ + V + + V Y ++ C+ + + +L M GC P +T
Sbjct: 246 EVFSVV-----SDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVT 300
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
+ ++ L +G+ DA ++ M+ P ++Y I I C VG A + N M
Sbjct: 301 FTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSME 360
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN---MLYSLLASLHDKNN 450
+ G P + T++ I G F + D + + D +S ++Y+ + + K
Sbjct: 361 QHGCFPNVRTYSTLIDG---FSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKL 417
Query: 451 NPVMAKNVLSEMMKNGLRPNVSVY----------RRVLKHLHTSHQEHMAKCL 493
AK+++ +M+ PN + RRV + L H+ C+
Sbjct: 418 MFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCV 470
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 11/216 (5%)
Query: 272 LIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNILIKEMCRRCDFKGPRDLLV--EMRQ 324
++++F ++ AK +I K +N LI+ +C C G R L V EMR+
Sbjct: 409 MVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCD-CRRVG-RALGVFHEMRR 466
Query: 325 VGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
GC P TYN ++ L + G DA ++ EM +TY + C+
Sbjct: 467 HGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSRE 526
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML-YSLLA 443
A F +M+ +G+QP T +A I Y A +++ + + N+L Y++L
Sbjct: 527 AMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMA-AWMLGAMNVVNCHRNILVYTILM 585
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
+ + V A L +M+ G+ PN + +++
Sbjct: 586 AELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVR 621
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 52/120 (43%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E + YN ++ +C+ + + +M G +P T++ ++ CK G+ A
Sbjct: 505 ELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAW 564
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+L M NCH + + Y I + C K A + +M+ G+ P T ++G F
Sbjct: 565 MLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVF 624
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ +I +C+ ++L M + G P TYN ++ C +GQ +A L+
Sbjct: 234 VVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLK 293
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M PD +TY + Y C+ G+ A F+ M KRGL+P + T+ ++GY
Sbjct: 294 KMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKG 353
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ + + L ++ ++S+L + K A V S+M + GL P+ Y
Sbjct: 354 ALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYG 413
Query: 476 RVLKHL 481
V+ L
Sbjct: 414 TVIGIL 419
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 101/224 (45%), Gaps = 12/224 (5%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTER-KVSYYNILIKEMCRRCDFKGPRDLLV 320
GSC +G L F+ LG VIKK R + L+K +C D+++
Sbjct: 99 GSCCCAGRLDL--GFAALG------NVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVL 150
Query: 321 E-MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML--GRNCHPDAITYEIFIVYSC 377
M Q+GC P +YN +L LC + +A ELL+ M G +C PD ++Y I
Sbjct: 151 RRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFF 210
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ G D A+ +++M+ RG+ P + T+++ I + A + + +
Sbjct: 211 KEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCR 270
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y+ + + + P A L +M +G+ P+V Y ++ +L
Sbjct: 271 TYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYL 314
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 78/187 (41%), Gaps = 2/187 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVG--CEPITLTYNYVLGVLCKNGQDADACELLEE 356
YNIL+K +C + +LL M G C P ++Y V+ K G A E
Sbjct: 165 YNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHE 224
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
ML R P+ +TY I C+ D A MVK G+ P T+ + + GY +
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
++A ++ + Y+ L KN A+ + M K GL+P ++ Y
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344
Query: 477 VLKHLHT 483
+L+ T
Sbjct: 345 LLQGYAT 351
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 107/258 (41%), Gaps = 40/258 (15%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPI 330
AL+EM +L L M + I ++ILI ++ + +MRQ G P
Sbjct: 354 ALVEMHGLLDL--MVRNGIHPNHY---VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPD 408
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA----- 385
T+TY V+G+LCK+G+ DA E+M+ P I Y I C K+D A
Sbjct: 409 TVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELIL 468
Query: 386 -------------FN-----------------FFNQMVKRGLQPRLATHAAFIKGYFIFY 415
FN F+ MV+ G++P + T++ I GY +
Sbjct: 469 EMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAG 528
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ ++A K + + Y+ L + + K + A + EM +G+ P++ Y
Sbjct: 529 KMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYN 588
Query: 476 RVLKHLHTSHQEHMAKCL 493
+L+ L + + AK L
Sbjct: 589 IILQGLFQTRRTAAAKEL 606
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 79/183 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C + ++L++EM G T+ +N ++ CK G+ ++ +L + M+
Sbjct: 447 YNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMV 506
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD ITY I C GK D A MV G++P T+ I GY R E
Sbjct: 507 RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRME 566
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA S + Y+++ + AK + + ++G + +S Y +L
Sbjct: 567 DALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIIL 626
Query: 479 KHL 481
L
Sbjct: 627 HGL 629
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 80/178 (44%), Gaps = 6/178 (3%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V YN L+ +C+ R + M + G +P TY +L G +
Sbjct: 301 EPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHG 360
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
LL+ M+ HP+ + I I + GK D A F++M ++GL P T+ I
Sbjct: 361 LLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC 420
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLY-SLLASL--HDKNNNPVMAKNVLSEMMKNGL 467
R EDA +Y D+ S N++Y SL+ SL DK + AK ++ EM+ G+
Sbjct: 421 KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDK---AKELILEMLDRGI 475
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 80/180 (44%)
Query: 295 KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
+++ Y L++ + LL M + G P ++ ++ K G+ A +
Sbjct: 338 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVF 397
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
+M + +PD +TY I C+ G+ + A +F QM+ L P + + I IF
Sbjct: 398 SKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIF 457
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+++ A + ++ D+ + ++ + H K + ++ + M++ G++P++ Y
Sbjct: 458 DKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITY 517
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNI+++ + + ++L V + + G + TYN +L LCKN +A + + +
Sbjct: 587 YNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 646
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
+ + T+ I I +VG+ D A + F + GL P + T++
Sbjct: 647 LTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYS 693
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 68/184 (36%), Gaps = 2/184 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI C+ + L EM G P +TYN +L L + + A A EL +
Sbjct: 552 YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT 611
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ TY I + C+ D A F + LQ T I R +
Sbjct: 612 ESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRND 671
Query: 419 DAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+A + LSA+ YSL+A + ++ M +NG N + +
Sbjct: 672 EAKDLFAALSANGLVPDVRT-YSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSI 730
Query: 478 LKHL 481
++ L
Sbjct: 731 VRKL 734
>gi|255660804|gb|ACU25571.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 418
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ + +L EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 206 VYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G A + ++M +GL+P T+ I G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEG 325
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A++Y + ++ Y+ L S + V A+ +L EM+ GL+P + Y
Sbjct: 326 HLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 385
Query: 476 RVL 478
++
Sbjct: 386 MII 388
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 80/195 (41%), Gaps = 6/195 (3%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ + + + + + + + G P +++N ++ K G + L M
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
PD TY + I C+ K + A F++M+ GL P T I G+ R
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLIDGHCKNGRV 257
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ A + + S + Y+ L K + A+++ EM GL+P+ Y +
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTL 317
Query: 478 LK------HLHTSHQ 486
+ HL T+ +
Sbjct: 318 IDGSCKEGHLETAFE 332
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%)
Query: 286 KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNG 345
+ +K V +NILI +C+ D L EM+ GC P +TYN ++ LC G
Sbjct: 397 ELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMG 456
Query: 346 QDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
+ +A +LL EM C +TY I C+ + + A F+QM +G+ T
Sbjct: 457 KLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFN 516
Query: 406 AFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKN 465
I G R +DA + + + +N+ Y+ + + + K N A ++L M N
Sbjct: 517 TLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTAN 576
Query: 466 GLRPNVSVYRRVLKHLHTSHQEHMA 490
G +V Y ++ L + + +A
Sbjct: 577 GFEIDVVTYGTLINGLCKAGRTQVA 601
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 117/283 (41%), Gaps = 15/283 (5%)
Query: 206 GRLDDY--ETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGS 263
GR++D +++ + F QV N G S AL +V++++ Q G
Sbjct: 281 GRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHAL------KVMDLMLQEGHD 334
Query: 264 CLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDL 318
V +I S G + AK ++ + + + +N LI + + + DL
Sbjct: 335 PDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDL 394
Query: 319 LVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCR 378
E+ G P T+N ++ LCK G L EEM C PD +TY I I + C
Sbjct: 395 ARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCS 454
Query: 379 VGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSNM 437
+GK A + N+M G T+ I R E+A + + + A S+
Sbjct: 455 MGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVT 514
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKH 480
+L+ L K A ++ +M+K GL+PN Y +L H
Sbjct: 515 FNTLIDGLC-KAKRIDDATELIEQMVKEGLQPNNITYNSILTH 556
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 78/189 (41%), Gaps = 1/189 (0%)
Query: 294 RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACEL 353
R +N LI +C+ +L+ +M + G +P +TYN +L CK G A ++
Sbjct: 510 RSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADI 569
Query: 354 LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
LE M D +TY I C+ G+ VA M +G++P + I+ F
Sbjct: 570 LETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFR 629
Query: 414 FYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM-AKNVLSEMMKNGLRPNVS 472
DA + + + Y ++ + P+ A + L EM+ G P S
Sbjct: 630 RNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFS 689
Query: 473 VYRRVLKHL 481
+R + + L
Sbjct: 690 SFRMLAEGL 698
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 86/211 (40%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V N LIK +CR + +L EM G P T+ ++ + G A +
Sbjct: 197 VVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKA 256
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M+ C P +T + I C++G+ + A + Q + G +P T+ F+ G
Sbjct: 257 KMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNG 316
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
A K + L + Y+ + + KN AK ++++M+ G P+ + +
Sbjct: 317 HVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFN 376
Query: 476 RVLKHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
++ L + ++ A L+ + L V
Sbjct: 377 TLIVALSSQNRLEEALDLARELTVKGLSPDV 407
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 73/174 (41%), Gaps = 2/174 (1%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
EM G +P +T N ++ LC+ Q A +LEEM PD T+ + G
Sbjct: 187 EMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEG 246
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLS-ADKYKSSSNMLY 439
+ A +M++ G P T I GY R EDA Y+ AD ++
Sbjct: 247 SIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYN 306
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
+ + L +N + A V+ M++ G P+V Y V+ L + + AK +
Sbjct: 307 TFVHGLC-QNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGI 359
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 51/119 (42%), Gaps = 1/119 (0%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V Y LI +C+ + LL MR G P YN V+ L + DA
Sbjct: 579 EIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALN 638
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGK-FDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
L EM PDA+TY+I CR G AF+F +MV +G P ++ +G
Sbjct: 639 LFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEG 697
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 83/195 (42%), Gaps = 10/195 (5%)
Query: 315 PRDLLVEMRQVGCEPITL------TYNYVLGVLCKNGQDADACELLEEMLGR-NCHPDAI 367
P L + R+ G P L + +L L + A +L L R + P +
Sbjct: 31 PPALRPQPRRRGHRPAPLRVYAISDQDRLLAALREQSDPEAALRMLNSALAREDFAPSSA 90
Query: 368 TYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV-- 425
YE + G FD+ +M + G Q R +F++ Y R++DA V+
Sbjct: 91 VYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRRFDDAVDLVLNQ 150
Query: 426 LSADKYK-SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTS 484
L D + + ++++ L ++ + + + ++V +EM G++P+V ++K L +
Sbjct: 151 LDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRA 210
Query: 485 HQEHMAKCLSSRYSS 499
HQ A + SS
Sbjct: 211 HQVRTAVLMLEEMSS 225
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 68/174 (39%), Gaps = 9/174 (5%)
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLE----EMLGRNCHPDAITYEIFIVYSCRVGK 381
G + T+ +N++L VL + + +LLE EM GR PD +T I CR +
Sbjct: 157 GVQADTVVFNHLLNVLVEGSK----LKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQ 212
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
A +M G+ P T ++G+ E A + + S + + ++
Sbjct: 213 VRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNV 272
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL-HTSHQEHMAKCLS 494
L + + K A + + + +G P+ Y + L H H K +
Sbjct: 273 LINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMD 326
>gi|42562903|ref|NP_176512.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|114050643|gb|ABI49471.1| At1g63230 [Arabidopsis thaliana]
gi|332195952|gb|AEE34073.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 323
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 107/227 (47%), Gaps = 3/227 (1%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCD 311
R+VE +Q G+ +++G+ + + S L L ++K + V YN +I +C+
Sbjct: 35 RMVEEGHQPYGT-IINGLCKMGDTESALNL--LSKMEETHIKAHVVIYNAIIDRLCKDGH 91
Query: 312 FKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEI 371
++L EM G P +TY+ ++ C++G+ DA +LL +M+ R +PD +T+
Sbjct: 92 HIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSA 151
Query: 372 FIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKY 431
I + GK A + M++RG+ P T+ + I G+ R DA + + A K
Sbjct: 152 LINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKS 211
Query: 432 KSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
S + +S L + + K + EM + G+ N Y ++
Sbjct: 212 CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLI 258
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 70/146 (47%), Gaps = 5/146 (3%)
Query: 271 ALIEMFSVLGLYEMAKYVIKK-TERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQV 325
+I+ F G + A+ +++ ER+++ ++ LI + + ++ +M +
Sbjct: 116 GMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR 175
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P T+TYN ++ CK + DA +L+ M ++C PD +T+ I C+ + D
Sbjct: 176 GIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNG 235
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGY 411
F +M +RG+ T+ I G+
Sbjct: 236 MEIFCEMHRRGIVANTVTYTTLIHGF 261
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 47/105 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I C++ + +L M C P +T++ ++ CK + + E+ EM
Sbjct: 184 YNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 243
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
R + +TY I C+VG D A + N M+ G+ P T
Sbjct: 244 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYIT 288
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 52/118 (44%), Gaps = 4/118 (3%)
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
M+ C PD +T+ + C G+ A ++MV+ G QP + I G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
E A + + + + ++Y+ + K+ + + A+N+ +EM G+ P+V Y
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITY 114
>gi|255660808|gb|ACU25573.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 418
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 86/183 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ +L EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G A + ++M +GL+P T+ I G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEG 325
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A++Y + ++ Y+ L S + V A+ +L EM+ GL+P + Y
Sbjct: 326 HLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 385
Query: 476 RVL 478
++
Sbjct: 386 MII 388
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 80/195 (41%), Gaps = 6/195 (3%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ + + + + + + + G P +++N ++ K G + L M
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNXM 197
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
PD TY + I C+ K D A F++M+ GL P T I G+ R
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRV 257
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ A + + S + Y+ L K + A+++ EM GL+P+ Y +
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTL 317
Query: 478 LK------HLHTSHQ 486
+ HL T+ +
Sbjct: 318 IDGSCKEGHLETAFE 332
>gi|255542424|ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548236|gb|EEF49727.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 532
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+NILI+ +CR + + +L M+ GC P +TYN ++ LCK + AC+LL+E+
Sbjct: 201 FNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQ 260
Query: 359 GRN-CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
RN C PD +TY I ++GK + A F +M++ G++P + T I G+
Sbjct: 261 SRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGF 314
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 79/173 (45%), Gaps = 13/173 (7%)
Query: 232 AFGFLPVLISSKALTKKG-----IWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAK 286
FG + +++++A+ +K I VV + + G C +R ++++ V+
Sbjct: 313 GFGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMK------ 366
Query: 287 YVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQ 346
+ + Y+++I +C+ RDLL +++ P YN V+ CK G
Sbjct: 367 --ARNVSPNIYTYSVIINALCKDNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGFCKAGN 424
Query: 347 DADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
+A ++ EM + C PD +T+ I I+ C G+ A + F +M+ G P
Sbjct: 425 VDEANVIVTEMEEKRCRPDKVTFTILIIGHCMKGRMVEALDIFKKMLAIGCAP 477
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 99/239 (41%), Gaps = 10/239 (4%)
Query: 269 VRALIEMFSVLGLYEMAKYVIKKTERKVSYYN-----ILIKEMCRRCDFKGPRDLLVEMR 323
+R+L +M GL+++ + VI + L+ + F + L++E++
Sbjct: 100 IRSLCQM----GLHDLVEMVIGYMRSDGHLIDSRVLGFLVTSFAQAGKFDLAKKLIIEVQ 155
Query: 324 QVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
+ YNY+L L K G+ +A L +E L + P+ T+ I I CRVG+ +
Sbjct: 156 GEEARISSFVYNYLLNELVKGGKVHEAIFLFKENLAFHSPPNTWTFNILIRGLCRVGEVE 215
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN-MLYSLL 442
F FN M G P + T+ I G + A + + S + M Y+ +
Sbjct: 216 KGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYTSI 275
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLS 501
S K A + EM+++G+ P V + ++ A+ + + +S S
Sbjct: 276 ISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASYS 334
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L EM + G EP +T+N ++ K G A + E+M +C PD +T+ I C
Sbjct: 291 LFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYC 350
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
R G + ++ M R + P + T++ I
Sbjct: 351 RTGDIRLGLKVWDVMKARNVSPNIYTYSVII 381
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 86/208 (41%), Gaps = 6/208 (2%)
Query: 265 LVSGVRAL--IEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
++SG R L +E SVL EM + I+ T V +N+LI + + + +M
Sbjct: 275 IISGFRKLGKLEAASVL-FEEMIRSGIEPT---VVTFNVLIDGFGKIGNMVAAEAMHEKM 330
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
C P +T+ ++ C+ G ++ + M RN P+ TY + I C+ +
Sbjct: 331 ASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINALCKDNRI 390
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
A + Q+ + P+ + I G+ ++A V +K + +++L
Sbjct: 391 HEARDLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDEANVIVTEMEEKRCRPDKVTFTIL 450
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
H V A ++ +M+ G P+
Sbjct: 451 IIGHCMKGRMVEALDIFKKMLAIGCAPD 478
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I C+ + ++ EM + C P +T+ ++ C G+ +A ++ ++ML
Sbjct: 412 YNPVIDGFCKAGNVDEANVIVTEMEEKRCRPDKVTFTILIIGHCMKGRMVEALDIFKKML 471
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
C PD IT + + GK AF+
Sbjct: 472 AIGCAPDNITISSLVACLLKAGKPSEAFH 500
>gi|255660792|gb|ACU25565.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 418
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 86/183 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ L EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 206 VYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G A + ++M+ +GL+P T+ I G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEG 325
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A++Y + ++ Y+ L S + V A+ +L EM+ GL+P + Y
Sbjct: 326 DLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 385
Query: 476 RVL 478
++
Sbjct: 386 MII 388
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 78/181 (43%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ + + + + + + + G P +++N ++ K G + L M
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAM 197
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
PD TY + I C+ K D A F++M+ +GL P T I G+ R
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRV 257
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ A + + S + Y+ L K + A++++ EM+ GL+P+ Y +
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTL 317
Query: 478 L 478
+
Sbjct: 318 I 318
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 120/282 (42%), Gaps = 8/282 (2%)
Query: 199 SLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAF-GFLPVLISSKALTKKGIWRVVEVL 257
++V+D + D E R+L+++ V N + F+ K L G+ ++ ++
Sbjct: 233 TIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYF--KRLDLGGVAEILTLM 290
Query: 258 NQVGGSCLVSGVRALIEMFSVLGLYEMAKYVI-----KKTERKVSYYNILIKEMCRRCDF 312
+ G +C V LI FS +G E A+ + K E V Y +I CR +
Sbjct: 291 EKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNV 350
Query: 313 KGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIF 372
K L EM G P TY ++ +CK GQ A L+ EM G+ + + +
Sbjct: 351 KRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTL 410
Query: 373 IVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYK 432
I C G D A M K+GL+ + + + G R ++A + ++
Sbjct: 411 IDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGV 470
Query: 433 SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
S + M ++ L ++ K N V AK V EM + G PN+ Y
Sbjct: 471 SPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITY 512
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 77/168 (45%), Gaps = 5/168 (2%)
Query: 292 TERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQD 347
ER VS + LI C+ +F + + EM + G P +TYN ++ K G
Sbjct: 466 VERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNM 525
Query: 348 ADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAF 407
+A +L +E+ R PD T I C GK D+A F++M +RGL P + T+ A
Sbjct: 526 KEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAM 585
Query: 408 IKGYFIFYRYEDAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVM 454
I G R E+A+K Y + + SL+ SLH + + M
Sbjct: 586 ISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSADESISM 633
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 72/173 (41%), Gaps = 2/173 (1%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIV-YSCRVG 380
M + E + VL LCK G +L++E+ + + +TY FI Y R+
Sbjct: 220 MVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLD 279
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
VA M K G+ + T+ I G+ + E+A + +K + +Y+
Sbjct: 280 LGGVA-EILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYT 338
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
+ S + ++ N A + EM GL P+ Y ++ + + Q A+ L
Sbjct: 339 SIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQML 391
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 60/139 (43%), Gaps = 5/139 (3%)
Query: 343 KNGQDADAC-ELLEEMLGRNCHPDAITYEIFIVYS--CRVGKFDVAFNFFNQMVKRGLQP 399
+ G D+C M+ N + Y + IV C+ G ++ +++ +G++
Sbjct: 205 RRGGQVDSCLRFFRRMV--NLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKA 262
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
+ T+ AFI+GYF + + L + + + + Y+LL A+ +
Sbjct: 263 NVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLF 322
Query: 460 SEMMKNGLRPNVSVYRRVL 478
EM + G+ +V VY ++
Sbjct: 323 EEMREKGIEADVYVYTSII 341
>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 625
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 93/210 (44%), Gaps = 3/210 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI CR D L EM G P +TYN +L LC+ G+ DA +LL EM
Sbjct: 306 YTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMS 365
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD +T I C++G A N+MV+ GL+ T+ A I G F R
Sbjct: 366 EKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHG-FCKIREM 424
Query: 419 DAYKYVVLSA-DKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
D K ++LS D S S YS L + N + E ++ GL + S+YR +
Sbjct: 425 DGAKELLLSMLDAGFSPSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSLYRAL 484
Query: 478 LKHLHTSHQ-EHMAKCLSSRYSSLSLGSSV 506
++ Q ++ K S +LG SV
Sbjct: 485 IRRFCKREQVDYAKKIFSLMQEKGTLGDSV 514
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 82/215 (38%), Gaps = 35/215 (16%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN +++++C + LL EM + EP +T N ++ CK G A ++
Sbjct: 338 VVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKN 397
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY---- 411
M+ D TY+ I C++ + D A M+ G P T++ + GY
Sbjct: 398 RMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSYCTYSWLVDGYCNQQ 457
Query: 412 -----------FI---------FYR-----------YEDAYKYVVLSADKYKSSSNMLYS 440
F+ YR + A K L +K +++Y+
Sbjct: 458 NEEAVLKLPDEFVRKGLCVDKSLYRALIRRFCKREQVDYAKKIFSLMQEKGTLGDSVIYT 517
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
LA + K A ++L EM K L + +YR
Sbjct: 518 SLAYAYWKLGKANAASDLLDEMYKRRLMITLKIYR 552
>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
Length = 332
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 107/227 (47%), Gaps = 3/227 (1%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCD 311
R+VE +Q G+ +++G+ + + S L L ++K + V YN +I +C+
Sbjct: 35 RMVEEGHQPYGT-IINGLCKMGDTESALNL--LSKMEETHIKAHVVIYNAIIDRLCKDGH 91
Query: 312 FKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEI 371
++L EM G P +TY+ ++ C++G+ DA +LL +M+ R +PD +T+
Sbjct: 92 HIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSA 151
Query: 372 FIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKY 431
I + GK A + M++RG+ P T+ + I G+ R DA + + A K
Sbjct: 152 LINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKS 211
Query: 432 KSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
S + +S L + + K + EM + G+ N Y ++
Sbjct: 212 CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLI 258
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 70/146 (47%), Gaps = 5/146 (3%)
Query: 271 ALIEMFSVLGLYEMAKYVIKK-TERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQV 325
+I+ F G + A+ +++ ER+++ ++ LI + + ++ +M +
Sbjct: 116 GMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR 175
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P T+TYN ++ CK + DA +L+ M ++C PD +T+ I C+ + D
Sbjct: 176 GIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNG 235
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGY 411
F +M +RG+ T+ I G+
Sbjct: 236 MEIFCEMHRRGIVANTVTYTTLIHGF 261
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 47/105 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I C++ + +L M C P +T++ ++ CK + + E+ EM
Sbjct: 184 YNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 243
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
R + +TY I C+VG D A + N M+ G+ P T
Sbjct: 244 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYIT 288
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 52/118 (44%), Gaps = 4/118 (3%)
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
M+ C PD +T+ + C G+ A ++MV+ G QP + I G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
E A + + + + ++Y+ + K+ + + A+N+ +EM G+ P+V Y
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITY 114
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%)
Query: 279 LGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
L L + K K E V Y +I +C + +L EM G P +TYN ++
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
LC G+ +DA LL +M+ R +P+ +T+ I + GK A +++M+KR +
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357
Query: 399 PRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNV 458
P + T+++ I G+ + R ++A L K + + Y+ L K +
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417
Query: 459 LSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
EM + GL N Y +++ L + MA+
Sbjct: 418 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 82/183 (44%), Gaps = 4/183 (2%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L+ M GC+P TY V+ LCK G A LL++M D + Y I C
Sbjct: 207 LIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALC 266
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ A N F +M +G++P + T+ + I+ + R+ DA + + ++ + + +
Sbjct: 267 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 326
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK----HLHTSHQEHMAKCL 493
+S L K V A+ + EM+K + P++ Y ++ H +HM + +
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 386
Query: 494 SSR 496
S+
Sbjct: 387 ISK 389
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 84/184 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LIK C+ + +L EM Q G T+TYN ++ L + G A ++ +
Sbjct: 395 VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFK 454
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M+ PD ITY I + C+ GK + A F + K ++P + T+ I+G
Sbjct: 455 KMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 514
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ ED + + K + ++Y+ + S + A + EM ++G PN Y
Sbjct: 515 KVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYN 574
Query: 476 RVLK 479
+++
Sbjct: 575 TLIR 578
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 12/204 (5%)
Query: 288 VIKKTER----KVSY----YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
VI ER ++SY YNILI CRR +L +M ++G EP +T + +L
Sbjct: 99 VISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLN 158
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
C + ++A L+++M P+ +T+ I K A ++MV RG QP
Sbjct: 159 GYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQP 218
Query: 400 RLATHAAFIKGYFIFYRYE-DAYKYVVLSADKYKSSSN-MLYSLLASLHDKNNNPVMAKN 457
L T+ + G + R + D ++ +K K ++ ++Y+ + N A N
Sbjct: 219 DLFTYGTVVNG--LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALN 276
Query: 458 VLSEMMKNGLRPNVSVYRRVLKHL 481
+ +EM G+RPNV Y +++ L
Sbjct: 277 LFTEMDNKGIRPNVVTYNSLIRCL 300
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 88/218 (40%), Gaps = 15/218 (6%)
Query: 271 ALIEMFSVLG-LYEMAKYVIKKTERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI+ F G L E K + +R + Y+ LI C + + M
Sbjct: 330 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 389
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
C P +TYN ++ CK + + EL EM R + +TY I + G D+A
Sbjct: 390 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 449
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM-----LYS 440
F +MV G+ P + T++ + G + + E A L +Y S M Y+
Sbjct: 450 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKA-----LVVFEYLQKSKMEPDIYTYN 504
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
++ K ++ + G++PNV +Y ++
Sbjct: 505 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 542
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 73/168 (43%), Gaps = 6/168 (3%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
DL EM Q P + +N +L + K + L E M D +Y I I
Sbjct: 66 DLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCF 125
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV-VLSADKYKSSS 435
CR + +A +M+K G +P + T ++ + GY R +A V + +Y+ ++
Sbjct: 126 CRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNT 185
Query: 436 NMLYSLLAS--LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+L+ LH+K + V ++ M+ G +P++ Y V+ L
Sbjct: 186 VTFNTLIHGLFLHNKASEAVA---LIDRMVARGCQPDLFTYGTVVNGL 230
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 42/102 (41%)
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
K E + YNI+I+ MC+ + DL + G +P + Y ++ C+ G +A
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 554
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
L EM P++ TY I R G + +M
Sbjct: 555 DALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596
>gi|255660788|gb|ACU25563.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 418
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 86/183 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ +L EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G A + ++M +GL+P T+ I G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEG 325
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A++Y + ++ Y+ L S + V A+ +L EM+ GL+P + Y
Sbjct: 326 DLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 385
Query: 476 RVL 478
++
Sbjct: 386 MII 388
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +N L+ + D L M+ G +P TY+ ++ LCK + DA EL +
Sbjct: 171 VVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFD 230
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
EM+ P+ +T+ I C+ G+ D+A + QM+ + L P L T+ I G
Sbjct: 231 EMIDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 285
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 75/181 (41%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ + + + + + + + P +++N ++ K G + L M
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
PD TY + I C+ K D A F++M+ GL P T I G+ R
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRV 257
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ A + + S + Y+ L K + A++++ EM GL+P+ Y +
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTL 317
Query: 478 L 478
+
Sbjct: 318 I 318
>gi|219363731|ref|NP_001136745.1| hypothetical protein [Zea mays]
gi|194696880|gb|ACF82524.1| unknown [Zea mays]
gi|414875980|tpg|DAA53111.1| TPA: hypothetical protein ZEAMMB73_920038 [Zea mays]
Length = 421
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 74/142 (52%), Gaps = 2/142 (1%)
Query: 263 SCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
+CL++G + SV GL + K K + V YN+LI +C + + + LL EM
Sbjct: 252 NCLITGFTTSRDWRSVSGLLDEMKE--KGVKADVVTYNVLIGALCCKGEVRKAVKLLDEM 309
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
+VG EP + YN ++ C+ G A E+ M R + +TY +F+ Y C++GK
Sbjct: 310 VEVGLEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEKRKKRANVVTYNVFLKYFCKMGKM 369
Query: 383 DVAFNFFNQMVKRGLQPRLATH 404
D A N+M+++GL P T+
Sbjct: 370 DEANVVLNEMLEKGLVPNRITY 391
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 81/195 (41%), Gaps = 9/195 (4%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQ-----DADACEL 353
+NI+I C+ + D+ + G P TYN ++ CK GQ DA L
Sbjct: 71 FNIVISGFCKTGQLRKAGDVAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVDA--L 128
Query: 354 LEEMLGRNCHPDAITYEIFI--VYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
L+EM+ PD +T+ + I + CR GK + + +M + GL L+T + + G+
Sbjct: 129 LKEMIQAGISPDVVTFNVLINGYWLCREGKVEDSIKLVEEMEELGLACILSTMNSVLNGF 188
Query: 412 FIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
+A +V A + + + Y+ L + + A M G+ PNV
Sbjct: 189 CKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRLGKMKEAAAAKDAMAGKGISPNV 248
Query: 472 SVYRRVLKHLHTSHQ 486
Y ++ TS
Sbjct: 249 KTYNCLITGFTTSRD 263
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 101/230 (43%), Gaps = 7/230 (3%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGL-YEMAKYVIKKTER----KVSYYNILIKEM 306
++VE + ++G +C++S + +++ F G+ E +V +R V YN L+
Sbjct: 164 KLVEEMEELGLACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGY 223
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
R K M G P TYN ++ + LL+EM + D
Sbjct: 224 RRLGKMKEAAAAKDAMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADV 283
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
+TY + I C G+ A ++MV+ GL+P+ + I G+ + A++ + L
Sbjct: 284 VTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHE-IRL 342
Query: 427 SADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+K K +N++ Y++ K A VL+EM++ GL PN Y
Sbjct: 343 RMEKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYE 392
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 66/157 (42%), Gaps = 17/157 (10%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCR---VGKFDVA 385
P T+N V+ CK GQ A ++ + + P TY I C+ VGK
Sbjct: 66 PDLFTFNIVISGFCKTGQLRKAGDVAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHV 125
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFY--RYEDAYKYVVLSADKYKSSSNMLYSLLA 443
+M++ G+ P + T I GY++ + ED+ K V + L +L+
Sbjct: 126 DALLKEMIQAGISPDVVTFNVLINGYWLCREGKVEDSIKLV------EEMEELGLACILS 179
Query: 444 SLHD------KNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+++ K V A+ + + + G++PNV Y
Sbjct: 180 TMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITY 216
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 77/185 (41%), Gaps = 2/185 (1%)
Query: 296 VSYYNILIKE--MCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACEL 353
V +N+LI +CR + L+ EM ++G I T N VL CK G +A
Sbjct: 141 VVTFNVLINGYWLCREGKVEDSIKLVEEMEELGLACILSTMNSVLNGFCKKGMMVEAEGW 200
Query: 354 LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
++ + R P+ ITY + R+GK A + M +G+ P + T+ I G+
Sbjct: 201 VDGIAQRGMKPNVITYNTLVDGYRRLGKMKEAAAAKDAMAGKGISPNVKTYNCLITGFTT 260
Query: 414 FYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
+ + +K + + Y++L A +L EM++ GL P
Sbjct: 261 SRDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVA 320
Query: 474 YRRVL 478
Y ++
Sbjct: 321 YNTII 325
>gi|255660800|gb|ACU25569.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 418
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 86/183 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ L EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 206 VYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G A + ++M+ +GL+P T+ I G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEG 325
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A++Y + ++ Y+ L S + V A+ +L EM+ GL+P + Y
Sbjct: 326 DLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 385
Query: 476 RVL 478
++
Sbjct: 386 MII 388
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 78/181 (43%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ + + + + + + + G P +++N ++ K G + L M
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAM 197
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
PD TY + I C+ K D A F++M+ +GL P T I G+ R
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRV 257
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ A + + S + Y+ L K + A++++ EM+ GL+P+ Y +
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTL 317
Query: 478 L 478
+
Sbjct: 318 I 318
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 103/257 (40%), Gaps = 43/257 (16%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+ G C+ + IE+F V+ V + + V Y+I+IK +CR LL
Sbjct: 168 INGFCIEGKIGRAIELFDVM--------VARGYKPNVHSYSIIIKGLCRVGKTTEVIKLL 219
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKN----------------------------------- 344
M+ VGCEP + YN ++ LCK+
Sbjct: 220 EHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNL 279
Query: 345 GQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
G+ +A LL EM G N PD + + + I C+ G+ A M + G++P +AT+
Sbjct: 280 GRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATY 339
Query: 405 AAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMK 464
+ GY + +A K + K + +S+L + + K AK + EM
Sbjct: 340 NTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTH 399
Query: 465 NGLRPNVSVYRRVLKHL 481
GL P+ Y ++ L
Sbjct: 400 RGLIPDTVSYNTLISGL 416
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 83/177 (46%), Gaps = 2/177 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+++LI MC+ + R +L M ++G EP TYN ++ C + +A ++ E M+
Sbjct: 304 FSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMI 363
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD ++ I + C+ + D A F++M RGL P ++ I G R
Sbjct: 364 SKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPL 423
Query: 419 DAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+A + + + ++ Y + + YS+L K A + M +GL+P++ Y
Sbjct: 424 EAEELFKDMHSNGYPPNL-VTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTY 479
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 92/207 (44%), Gaps = 13/207 (6%)
Query: 276 FSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYN 335
FSVLG K + E V ++ LI C +L M G +P +Y+
Sbjct: 146 FSVLG-----KIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYS 200
Query: 336 YVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR 395
++ LC+ G+ + +LLE M C PD + Y + C+ + A + F +M
Sbjct: 201 IIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGT 260
Query: 396 GLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM----LYSLLASLHDKNNN 451
G+ P + T+ + I G R+++A+ + ++ K + M +S+L + K
Sbjct: 261 GILPTVVTYTSLIHGLRNLGRWKEAFGLL----NEMKGGNIMPDLVAFSVLIDIMCKEGE 316
Query: 452 PVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A+ +L M + G+ P+V+ Y ++
Sbjct: 317 VSEARVILKTMTEMGVEPDVATYNTLM 343
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 9/179 (5%)
Query: 243 KALTKKGIWRVVEVLNQV-GGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNI 301
K +T+ G+ V N + G CL V ++F V+ + K V ++I
Sbjct: 325 KTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVM--------ISKGRMPDVFSFSI 376
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
L+ C+ + L EM G P T++YN ++ LC+ + +A EL ++M
Sbjct: 377 LVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNG 436
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
P+ +TY I + + G D A F M GL+P L T+ I G + +++DA
Sbjct: 437 YPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDA 495
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 46/101 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C+ +L +M G P +TY+ +L L K G A L M
Sbjct: 409 YNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAME 468
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
PD +TY I I C+ GKF A F ++ +GLQP
Sbjct: 469 NSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQP 509
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+IL+ + ++ L M G +P +TYN ++ +CK G+ DA EL E+
Sbjct: 444 YSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELS 503
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
+ P+ I C+ G D A F QM K P
Sbjct: 504 VKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSP 544
>gi|147776740|emb|CAN72416.1| hypothetical protein VITISV_027905 [Vitis vinifera]
Length = 422
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 62/122 (50%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ +CR+ K LL M+ GC P + YN V+ C+ G+ DAC++LE+M
Sbjct: 226 YTTLLNSLCRKKKLKEAYKLLCRMKVKGCNPDIVHYNTVILGFCREGRXLDACKVLEDMP 285
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C P+ ++Y + C G +D A N+ +M+ +G P + A I G+ + E
Sbjct: 286 SNGCSPNLMSYGTLVSGLCDQGLYDEAKNYVEEMLSKGFSPHFSVFHALINGFCNVGKLE 345
Query: 419 DA 420
+A
Sbjct: 346 EA 347
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 81/186 (43%), Gaps = 12/186 (6%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNIL+ C D L +M + P +Y ++ LC+ Q A +LLE+ML
Sbjct: 156 YNILMSAFCFNGDLSIAYTLFNQMFKRDVAPDVESYRILMQGLCRKSQVNRAVDLLEDML 215
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PDA++Y + CR K A+ +M +G P + + I G+ R
Sbjct: 216 NKGYVPDALSYTTLLNSLCRKKKLKEAYKLLCRMKVKGCNPDIVHYNTVILGFCREGRXL 275
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLAS------LHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
DA K + S + M Y L S L+D+ AKN + EM+ G P+ S
Sbjct: 276 DACKVLEDMPSNGCSPNLMSYGTLVSGLCDQGLYDE------AKNYVEEMLSKGFSPHFS 329
Query: 473 VYRRVL 478
V+ ++
Sbjct: 330 VFHALI 335
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 67/158 (42%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
DL + G P T +YN ++ C NG + A L +M R+ PD +Y I +
Sbjct: 139 DLFKSAHRYGVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVAPDVESYRILMQGL 198
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
CR + + A + M+ +G P ++ + + ++AYK + K +
Sbjct: 199 CRKSQVNRAVDLLEDMLNKGYVPDALSYTTLLNSLCRKKKLKEAYKLLCRMKVKGCNPDI 258
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ Y+ + + + A VL +M NG PN+ Y
Sbjct: 259 VHYNTVILGFCREGRXLDACKVLEDMPSNGCSPNLMSY 296
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 50/120 (41%)
Query: 289 IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
+K + +YN +I CR +L +M GC P ++Y ++ LC G
Sbjct: 251 VKGCNPDIVHYNTVILGFCREGRXLDACKVLEDMPSNGCSPNLMSYGTLVSGLCDQGLYD 310
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
+A +EEML + P + I C VGK + A +M++ G T A I
Sbjct: 311 EAKNYVEEMLSKGFSPHFSVFHALINGFCNVGKLEEACEVLXEMLRHGEAXHTETWVAII 370
>gi|413948334|gb|AFW80983.1| hypothetical protein ZEAMMB73_782047 [Zea mays]
Length = 436
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 84/182 (46%), Gaps = 3/182 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNI++K +C R F G R +L EM G P +T+N ++G C+ G+ A A L++EM
Sbjct: 164 YNIILKGVCHRDGFSGARVVLDEMLARGVRPTVVTFNTLVGSACREGELAAAERLVDEMT 223
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R P+A+TY + + C G++D A M R QP +A + +
Sbjct: 224 RRGVAPNAVTYALLMQGLCDAGRYDDAKKLLFDMEYRDCQPDVANYGVLMSACAACGD-A 282
Query: 419 DAYKYVV--LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
D K ++ + K K L+ L D + ++ +K+G P+ + YR
Sbjct: 283 DGVKGLISDMRKRKMKPDDASYNVLIRCLCDAGRVDEAHRALVEMQLKDGTAPSAATYRV 342
Query: 477 VL 478
+L
Sbjct: 343 LL 344
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 87/172 (50%), Gaps = 12/172 (6%)
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
RD+L E ++G ++YN +L +C + A +L+EML R P +T+ +
Sbjct: 146 RDMLPEAPKLGVRTNAVSYNIILKGVCHRDGFSGARVVLDEMLARGVRPTVVTFNTLVGS 205
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYK--- 432
+CR G+ A ++M +RG+ P T+A ++G RY+DA K +L +Y+
Sbjct: 206 ACREGELAAAERLVDEMTRRGVAPNAVTYALLMQGLCDAGRYDDAKK--LLFDMEYRDCQ 263
Query: 433 ---SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
++ +L S A+ D + K ++S+M K ++P+ + Y +++ L
Sbjct: 264 PDVANYGVLMSACAACGDADG----VKGLISDMRKRKMKPDDASYNVLIRCL 311
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 87/194 (44%), Gaps = 17/194 (8%)
Query: 219 NDFNVYQVCLNEK-AFGFLPVLISSKALT----KKG----IWRVVEVLNQVGGSCLVSGV 269
+ F+ +V L+E A G P +++ L ++G R+V+ + + G +
Sbjct: 175 DGFSGARVVLDEMLARGVRPTVVTFNTLVGSACREGELAAAERLVDEMTRRGVAPNAVTY 234
Query: 270 RALIEMFSVLGLYEMAKYVI-----KKTERKVSYYNILIKEMCRRC-DFKGPRDLLVEMR 323
L++ G Y+ AK ++ + + V+ Y +L+ C C D G + L+ +MR
Sbjct: 235 ALLMQGLCDAGRYDDAKKLLFDMEYRDCQPDVANYGVLMSA-CAACGDADGVKGLISDMR 293
Query: 324 QVGCEPITLTYNYVLGVLCKNGQDADACELLEEM-LGRNCHPDAITYEIFIVYSCRVGKF 382
+ +P +YN ++ LC G+ +A L EM L P A TY + + C F
Sbjct: 294 KRKMKPDDASYNVLIRCLCDAGRVDEAHRALVEMQLKDGTAPSAATYRVLLDGCCEARDF 353
Query: 383 DVAFNFFNQMVKRG 396
D+ FN M+ G
Sbjct: 354 DLGLRVFNAMLASG 367
>gi|255602749|ref|XP_002537912.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223514585|gb|EEF24471.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 254
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 87/186 (46%), Gaps = 8/186 (4%)
Query: 250 IWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIK 304
IW+ V L V S A+I F +G+ +AK + + + YN+L+
Sbjct: 3 IWKRVNELGFVPDSITYG---AMIRGFCRMGMLNVAKGLFTRMRALGLSPALCDYNMLMA 59
Query: 305 EMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHP 364
+C+ + R L E+R CE ++N ++ K G A ELL++ML +P
Sbjct: 60 SLCKESSLEQARKLFQELRNSNCELDVFSFNIMIYGTLKAGDIQSAKELLKDMLQMGVNP 119
Query: 365 DAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV 424
+A TY I I + ++G D A FN+M+ G P + + + +KG+ + E+ +
Sbjct: 120 NAFTYFILINWFSKLGLLDEAKEAFNRMIGSGFIPSIHVYDSLLKGFSSMGKAEETINLL 179
Query: 425 VLSADK 430
L ADK
Sbjct: 180 QLMADK 185
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 45/105 (42%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V +NI+I + D + ++LL +M Q+G P TY ++ K G +A E
Sbjct: 83 ELDVFSFNIMIYGTLKAGDIQSAKELLKDMLQMGVNPNAFTYFILINWFSKLGLLDEAKE 142
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
M+G P Y+ + +GK + N M +G+
Sbjct: 143 AFNRMIGSGFIPSIHVYDSLLKGFSSMGKAEETINLLQLMADKGV 187
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%)
Query: 279 LGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
L L + K K E V Y +I +C + +L EM G P +TYN ++
Sbjct: 222 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 281
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
LC G+ +DA LL +M+ R +P+ +T+ I + GK A +++M+KR +
Sbjct: 282 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 341
Query: 399 PRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNV 458
P + T+++ I G+ + R ++A L K + + Y+ L K +
Sbjct: 342 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 401
Query: 459 LSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
EM + GL N Y +++ L + MA+
Sbjct: 402 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 434
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 82/183 (44%), Gaps = 4/183 (2%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L+ M GC+P TY V+ LCK G A LL++M D + Y I C
Sbjct: 191 LIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALC 250
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ A N F +M +G++P + T+ + I+ + R+ DA + + ++ + + +
Sbjct: 251 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 310
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK----HLHTSHQEHMAKCL 493
+S L K V A+ + EM+K + P++ Y ++ H +HM + +
Sbjct: 311 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 370
Query: 494 SSR 496
S+
Sbjct: 371 ISK 373
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 84/184 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LIK C+ + +L EM Q G T+TYN ++ L + G A ++ +
Sbjct: 379 VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFK 438
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M+ PD ITY I + C+ GK + A F + K ++P + T+ I+G
Sbjct: 439 KMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 498
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ ED + + K + ++Y+ + S + A + EM ++G PN Y
Sbjct: 499 KVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYN 558
Query: 476 RVLK 479
+++
Sbjct: 559 TLIR 562
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 12/204 (5%)
Query: 288 VIKKTER----KVSY----YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
VI ER ++SY YNILI CRR +L +M ++G EP +T + +L
Sbjct: 83 VISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLN 142
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
C + ++A L+++M P+ +T+ I K A ++MV RG QP
Sbjct: 143 GYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQP 202
Query: 400 RLATHAAFIKGYFIFYRYE-DAYKYVVLSADKYKSSSN-MLYSLLASLHDKNNNPVMAKN 457
L T+ + G + R + D ++ +K K ++ ++Y+ + N A N
Sbjct: 203 DLFTYGTVVNG--LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALN 260
Query: 458 VLSEMMKNGLRPNVSVYRRVLKHL 481
+ +EM G+RPNV Y +++ L
Sbjct: 261 LFTEMDNKGIRPNVVTYNSLIRCL 284
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 86/214 (40%), Gaps = 15/214 (7%)
Query: 271 ALIEMFSVLG-LYEMAKYVIKKTERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI+ F G L E K + +R + Y+ LI C + + M
Sbjct: 314 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 373
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
C P +TYN ++ CK + + EL EM R + +TY I + G D+A
Sbjct: 374 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 433
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM-----LYS 440
F +MV G+ P + T++ + G + + E A L +Y S M Y+
Sbjct: 434 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKA-----LVVFEYLQKSKMEPDIYTYN 488
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
++ K ++ + G++PNV +Y
Sbjct: 489 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 522
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 73/168 (43%), Gaps = 6/168 (3%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
DL EM Q P + +N +L + K + L E M D +Y I I
Sbjct: 50 DLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCF 109
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV-VLSADKYKSSS 435
CR + +A +M+K G +P + T ++ + GY R +A V + +Y+ ++
Sbjct: 110 CRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNT 169
Query: 436 NMLYSLLAS--LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+L+ LH+K + V ++ M+ G +P++ Y V+ L
Sbjct: 170 VTFNTLIHGLFLHNKASEAVA---LIDRMVARGCQPDLFTYGTVVNGL 214
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 42/102 (41%)
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
K E + YNI+I+ MC+ + DL + G +P + Y ++ C+ G +A
Sbjct: 479 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 538
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
L EM P++ TY I R G + +M
Sbjct: 539 DALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 580
>gi|255660794|gb|ACU25566.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
Length = 418
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 85/183 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ L EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 206 VYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G A + ++M+ +GL P T+ I G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEG 325
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A++Y + ++ Y+ L S + V A+ +L EM+ GL+P + Y
Sbjct: 326 DLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYT 385
Query: 476 RVL 478
++
Sbjct: 386 MII 388
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 76/181 (41%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ + + + + + + + P +++N ++ K G + L M
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
PD TY + I C+ K D A F++M+ +GL P T I G+ R
Sbjct: 198 QVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRV 257
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ A + + S + Y+ L K + A++++ EM+ GL P+ Y +
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTL 317
Query: 478 L 478
+
Sbjct: 318 I 318
>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 755
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN IK + ++ DLL +M+++ P ++TYN + K G+ +A LL
Sbjct: 495 VITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLR 554
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM G+ PD I+Y I + G+++ A QM +GL P + T+ + IK
Sbjct: 555 EMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGG 614
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+E A + + + M Y+L S K A ++L EM GL P+V Y
Sbjct: 615 EWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPDVISYT 674
Query: 476 RVLKHLHTSHQEHMA 490
++ + + A
Sbjct: 675 SAIRACNAEGEWEKA 689
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 107/255 (41%), Gaps = 22/255 (8%)
Query: 201 VIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLIS----SKALTKKGIWR-VVE 255
I CG+ +E LL K P I+ A +K+G W+ V
Sbjct: 501 AIKTCGKGGQWEKALDLLAKM---------KELAMTPDSITYNSAIAACSKRGRWKEAVA 551
Query: 256 VLNQVGGSCLVSGV---RALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMC 307
+L ++ G L V A I+ + G +E A ++++ K V YN +IK
Sbjct: 552 LLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACG 611
Query: 308 RRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAI 367
R +++ DLL E+++ P ++YN + K G+ +A +LL EM PD I
Sbjct: 612 RGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPDVI 671
Query: 368 TYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLS 427
+Y I G+++ A N M G+ P +++ I+ R E+A V
Sbjct: 672 SYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTATSYSLAIEACGKGGRREEAVCLVREM 731
Query: 428 ADKYKSSSNMLYSLL 442
A + S N+ SL+
Sbjct: 732 AQRGLSHRNISNSLI 746
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 120/283 (42%), Gaps = 14/283 (4%)
Query: 201 VIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWR-VVEVLNQ 259
I CG+ +E +LL + V + L A F + A TK G W+ +E+L +
Sbjct: 361 AIVACGKGGQWEKAVELLRE--VTALGLTPDATSFNSAI---AACTKSGRWKEALELLKE 415
Query: 260 VGGSCLVSGV---RALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCD 311
+ L + IE G +EMA + ++ K V NI I+ R
Sbjct: 416 MPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGR 475
Query: 312 FKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEI 371
++ +LL +M G P +TYN + K GQ A +LL +M PD+ITY
Sbjct: 476 WQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNS 535
Query: 372 FIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKY 431
I + G++ A +M +GL P + ++ A I Y ++E A + + K
Sbjct: 536 AIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKG 595
Query: 432 KSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + + Y+ + + A ++L E+ + + P++ Y
Sbjct: 596 LTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSY 638
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 114/280 (40%), Gaps = 14/280 (5%)
Query: 201 VIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIW-RVVEVLNQ 259
I+ CG D +E LL + +V +E ++ + KA + G W RV+ +L +
Sbjct: 186 AIEACGSGDQWEIAVSLLREMADREVVPDEISYNS-----AIKACGRGGQWERVIGLLRE 240
Query: 260 VGGSCLVSGV---RALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCD 311
+ L ++I G ++ A V+ + K YN+ I+ R
Sbjct: 241 MPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGR 300
Query: 312 FKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEI 371
+K ++L +M G P ++Y+ + GQ + +LL+EM GR P+ I +
Sbjct: 301 WKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNS 360
Query: 372 FIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKY 431
IV + G+++ A ++ GL P + + I R+++A + + K
Sbjct: 361 AIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKR 420
Query: 432 KSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
+ Y+ K MA + +M GL PNV
Sbjct: 421 LKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNV 460
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 78/176 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN IK R ++ LL EM VG P +TYN V+ K GQ +A +L EM
Sbjct: 218 YNSAIKACGRGGQWERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMS 277
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+ I+Y + I R G++ A QM +G+ P + ++ A IK ++E
Sbjct: 278 AKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWE 337
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + A + + + + ++ K A +L E+ GL P+ + +
Sbjct: 338 TSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSF 393
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 67/151 (44%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
+LL +M G P +TYN V+ + G+ A +LL+E+ PD ++Y + I
Sbjct: 586 ELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISAC 645
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
+ G+++ A + +M GL P + ++ + I+ +E A + L S +
Sbjct: 646 GKRGRWEEALDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTA 705
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
YSL K A ++ EM + GL
Sbjct: 706 TSYSLAIEACGKGGRREEAVCLVREMAQRGL 736
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 74/189 (39%), Gaps = 1/189 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEM-RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
Y I R+ ++ +LL E+ Q G P YN + Q A LL EM
Sbjct: 147 YTTAITTCGRQGQWEKALELLREIPEQEGVSPNVFCYNSAIEACGSGDQWEIAVSLLREM 206
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
R PD I+Y I R G+++ +M GL P T+ + I G ++
Sbjct: 207 ADREVVPDEISYNSAIKACGRGGQWERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQW 266
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
++A + + K + + Y++ ++ A VL +M G+ P+V Y
Sbjct: 267 KEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAA 326
Query: 478 LKHLHTSHQ 486
+K Q
Sbjct: 327 IKACGGGGQ 335
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 121/273 (44%), Gaps = 11/273 (4%)
Query: 214 MRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALI 273
+R L+N + V L K + L +SK + K +V+ +L G L++ A+I
Sbjct: 80 LRHLVNKGHKPDVVLCTK---LIHGLFTSKTIDKA--IQVMHILENHGHPDLIA-YNAII 133
Query: 274 EMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCE 328
F + A V+ + + K + YNILI +C R + ++ + C+
Sbjct: 134 TGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCK 193
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P +TY ++ G +A +LL+EML N PD TY I CR G D AF
Sbjct: 194 PTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQI 253
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
+ + +G P + T+ ++G ++E Y+ + + ++ + YS+L S +
Sbjct: 254 ISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCR 313
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ +L +M K GL+P+ Y ++ L
Sbjct: 314 DGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAAL 346
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 87/187 (46%), Gaps = 8/187 (4%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YNIL++ + + ++ +L+ +M GCE +TY+ ++ +C++G+ + LL+
Sbjct: 266 VITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLK 325
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M + PD Y+ I C+ G+ D+A + M+ G P + + +
Sbjct: 326 DMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQK 385
Query: 416 RYEDAY----KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
R ++A K + SS N ++S L S K V A ++ EM+ G+ P+
Sbjct: 386 RADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHK----VRALGMILEMLDKGVDPDG 441
Query: 472 SVYRRVL 478
Y ++
Sbjct: 442 ITYNSLI 448
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 3/216 (1%)
Query: 269 VRALIEMFSVLGLYE-MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGC 327
+R L+ YE M+ V + E V Y++LI +CR + LL +M++ G
Sbjct: 273 LRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGL 332
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
+P Y+ ++ LCK G+ A E+L+ M+ C PD + Y + C+ + D A +
Sbjct: 333 KPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALS 392
Query: 388 FFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLAS--L 445
F ++ + G P +++ + + A ++ DK + Y+ L S
Sbjct: 393 IFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLC 452
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
D + + V EM + +P+V Y VL L
Sbjct: 453 RDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGL 488
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL--EEMLGRNCHPDAITYEIFIVY 375
+++EM G +P +TYN ++ LC++G +A ELL EM C P ++Y I ++
Sbjct: 428 MILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLG 487
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
C+V + A MV +G +P T+ I+G
Sbjct: 488 LCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEG 522
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLV--EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
YN LI +CR +LLV EM C+P ++YN VL LCK + +DA E+L
Sbjct: 444 YNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAA 503
Query: 357 MLGRNCHPDAITYEIFI 373
M+ + C P+ TY I
Sbjct: 504 MVDKGCRPNETTYTFLI 520
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 85/194 (43%)
Query: 288 VIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQD 347
V+ V YN++I + R D + R L EM+ G P +TYN ++ K G
Sbjct: 243 VVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGML 302
Query: 348 ADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAF 407
A + EEM C PD ITY I C+ + AF + + M +RGLQP + T++
Sbjct: 303 TGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTL 362
Query: 408 IKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
I + +A K+ V + Y+ L + K + A + SEM + G+
Sbjct: 363 IDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGV 422
Query: 468 RPNVSVYRRVLKHL 481
N+ Y +L L
Sbjct: 423 NLNIVTYTALLDGL 436
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 93/213 (43%), Gaps = 3/213 (1%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L EM K K + + Y I +CR+ + + ++ EM G + Y ++
Sbjct: 484 LEEMNK---KNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDA 540
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
K G+ +A LL+EM +TY + I C++G A +F+ M + GLQP
Sbjct: 541 YFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPN 600
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
+ + A I G E+A DK S ++Y+ L + K+ NP A ++ +
Sbjct: 601 IMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRN 660
Query: 461 EMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
M++ G+ ++ Y ++ Q +AK L
Sbjct: 661 RMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSL 693
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 85/205 (41%), Gaps = 5/205 (2%)
Query: 279 LGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLT 333
LG+ E A+ K + KV N L+ + + +M G P T
Sbjct: 194 LGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFT 253
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
YN V+G L + G A L EEM + PD +TY I +VG A + F +M
Sbjct: 254 YNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMK 313
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPV 453
G +P + T+ + I + F R A++Y+ + + + YS L K +
Sbjct: 314 DAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLL 373
Query: 454 MAKNVLSEMMKNGLRPNVSVYRRVL 478
A +M++ GL+PN Y ++
Sbjct: 374 EANKFFVDMIRVGLQPNEFTYTSLI 398
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
D+L EM + +P L Y + LC+ + D+ ++ EM+ ++ Y I
Sbjct: 482 DILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAY 541
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
+VGK A N +M G++ + T+ I G + A +Y +
Sbjct: 542 FKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNI 601
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
M+Y+ L KN+ AKN+ +EM+ G+ P+ VY ++
Sbjct: 602 MIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLI 643
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 78/218 (35%), Gaps = 35/218 (16%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACEL----- 353
Y LI C+ D L EM+Q G +TY +L LC++G+ +A EL
Sbjct: 394 YTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALL 453
Query: 354 ------------------------------LEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
LEEM +N PD + Y I CR + +
Sbjct: 454 KAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIE 513
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
+ +M+ GL + I YF + +A + D + + Y +L
Sbjct: 514 DSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLI 573
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K A M +NGL+PN+ +Y ++ L
Sbjct: 574 DGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGL 611
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 69/183 (37%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ LI C+ V+M +VG +P TY ++ CK G +A +L
Sbjct: 356 VVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLES 415
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM + + +TY + C G+ A F ++K G + + GY
Sbjct: 416 EMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAK 475
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A + K +LY + N + V+ EMM GL N +Y
Sbjct: 476 MMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYT 535
Query: 476 RVL 478
++
Sbjct: 536 TLI 538
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 65/165 (39%), Gaps = 5/165 (3%)
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMC 307
+++ + +G V LI+ +GL + A R + Y LI +C
Sbjct: 553 LLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLC 612
Query: 308 RRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAI 367
+ + ++L EM G P L Y ++ K+G +A L M+ D
Sbjct: 613 KNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLC 672
Query: 368 TYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
Y I R G+ +A + ++M+++G+ P ++ Y+
Sbjct: 673 AYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYY 717
>gi|255660842|gb|ACU25590.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 418
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ +L EM + G P +T+ ++ CKNG+ A E+ +
Sbjct: 206 VYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGKLDLAMEIYK 265
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
++L + PD ITY I C+ G + ++M +GL+P T+ I G
Sbjct: 266 QILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTLIDGSCKEG 325
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A++Y ++ +++Y+ L S K V A+ +L EM+ GL+P+ Y
Sbjct: 326 DLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSVDAEKMLREMLSVGLKPDSGTYT 385
Query: 476 RVL 478
V+
Sbjct: 386 IVM 388
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 79/181 (43%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ C+ + + + + + + G +P +++N ++ K G + L M
Sbjct: 138 FFNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKMGILDEGFRLKNAM 197
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
PD TY + I C+ K D A F++M+++GL P T I G+ +
Sbjct: 198 HASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGKL 257
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ A + + S + Y+ L K + ++++ EM GL+P+ Y +
Sbjct: 258 DLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTL 317
Query: 478 L 478
+
Sbjct: 318 I 318
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 54/140 (38%), Gaps = 35/140 (25%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL-------------------- 338
YN LI C++ D K RDL+ EM G +P +TY ++
Sbjct: 279 YNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKKMI 338
Query: 339 ---------------GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
LCK G+ DA ++L EML PD+ TY I + C+ G +
Sbjct: 339 EENIRLDDVVYTALISGLCKEGRSVDAEKMLREMLSVGLKPDSGTYTIVMNEFCKNGDVN 398
Query: 384 VAFNFFNQMVKRGLQPRLAT 403
+M + G P + T
Sbjct: 399 TGSKLLKEMQRDGHVPSVVT 418
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 98/228 (42%), Gaps = 5/228 (2%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEM 306
RV+E++ G V AL++ F G A ++ K YN+LI+
Sbjct: 345 RVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQ 404
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
C + LL M G TYN ++ LCK+G+ AC L + + R P+A
Sbjct: 405 CIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNA 464
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
+T+ I C+ GK D+A+ F +MV G P T+++FI+ ++ ++
Sbjct: 465 VTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGE 524
Query: 427 SADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
K S + Y+++ K N + EM+ +G P+V Y
Sbjct: 525 MLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTY 572
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 82/192 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ++ CR K ++L EM + G P +T V+ CK G+ +DA +LE M
Sbjct: 292 YAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMK 351
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R C P+ TY + C GK A N+M G+ P T+ I+G I E
Sbjct: 352 LRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIE 411
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A++ + L + Y+ L + K+ A ++ + G++PN + ++
Sbjct: 412 SAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLI 471
Query: 479 KHLHTSHQEHMA 490
L S + +A
Sbjct: 472 NGLCKSGKADIA 483
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 4/173 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I+ +CRR D L M + G P T+N ++ C+ Q A +L ++M
Sbjct: 156 YNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMP 215
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R D ++Y I C G+ D A F +M QP + +AA +KG R E
Sbjct: 216 LRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMD----QPDMHMYAALVKGLCNAERGE 271
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
+ + + S Y+ + + A+ +L EM + GL P V
Sbjct: 272 EGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCV 324
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 75/183 (40%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N LI +C+ L +M GC P T TY+ + LCK + + EML
Sbjct: 467 FNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEML 526
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
++ P + Y I I + + + + +MV G P + T+ ++ Y I R
Sbjct: 527 QKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLN 586
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A ++ + + M Y+ L H A ++L +M PN Y +L
Sbjct: 587 EAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILL 646
Query: 479 KHL 481
+HL
Sbjct: 647 RHL 649
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 8/158 (5%)
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
R P TYN V+ LC+ A A L M+ PDA T+ IV CR +
Sbjct: 145 RHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQV 204
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
DVA + F++M RG + ++A I+G R ++A V L + + +M +L+
Sbjct: 205 DVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEA---VELFGEMDQPDMHMYAALV 261
Query: 443 ASL--HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
L ++ ++ +L M + G RP+ Y V+
Sbjct: 262 KGLCNAERGEEGLL---MLRRMKELGWRPSTRAYAAVV 296
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 92/225 (40%), Gaps = 19/225 (8%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y ++ C ++L+EM + G T+ YN ++ GQ A +L+
Sbjct: 569 VVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILK 628
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVG-----------------KFDVAFNFFNQMVKRGLQ 398
+M P+ TY I + + R+ + F F+ M K
Sbjct: 629 QMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFL 688
Query: 399 PRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNV 458
P T+++ ++G+ R E+A V L + S + +Y+ L + K+ + A +
Sbjct: 689 PNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVL 748
Query: 459 LSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAK--CLSSRYSSLS 501
+ M+++G P + Y+ +L L Q AK ++SR+ S
Sbjct: 749 VCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYS 793
Score = 45.1 bits (105), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 80/218 (36%), Gaps = 12/218 (5%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
G C + V ++F + L A+ V+ Y LI+ +C +L E
Sbjct: 197 GYCRTNQVDVARDLFDKMPLRGFAQDVVS--------YATLIEGLCEAGRIDEAVELFGE 248
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M Q P Y ++ LC + + +L M P Y + + CR K
Sbjct: 249 MDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERK 304
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
A +M ++GL P + T A I Y R DA + + L + + Y+
Sbjct: 305 AKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNA 364
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
L A +L++M G+ P+ Y +++
Sbjct: 365 LVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIR 402
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 75/179 (41%), Gaps = 14/179 (7%)
Query: 245 LTKKGIWRVVEVLNQVGGSCLV--------SGV-RALIEMFSVLGLYEMAKYVIK-KTER 294
LT G+W+ +E+ + G ++ SG +++E FS G E A ++ E
Sbjct: 661 LTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKED 720
Query: 295 KVSY----YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
+S Y L+ C+ + L+ M Q G P ++Y ++L L GQ A
Sbjct: 721 SISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKA 780
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
E+ ++ PD I +++ I + G D++ + + +P T+A +
Sbjct: 781 KEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTE 839
>gi|255660818|gb|ACU25578.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 418
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 87/183 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ +L EM G P ++++ ++ CK+G+ A E+ +
Sbjct: 206 VYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVDLAMEIYK 265
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G A + N+M +GL+P T+ I G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSCKEG 325
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A++Y + ++ Y+ L S + V A+ +L EM+ GL+P + Y
Sbjct: 326 DLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 385
Query: 476 RVL 478
++
Sbjct: 386 MII 388
>gi|227463004|gb|ACP39954.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463006|gb|ACP39955.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 547
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 143/360 (39%), Gaps = 50/360 (13%)
Query: 131 KQVSEIIELLRSGDSETESKLL-SMSVSLSNASVIEILRVLNSEKVSALCFLKYMREIMP 189
+ + I LL + KLL S+ +S + V+E+L+ L++ V AL F + E
Sbjct: 93 QDAARICTLLSTHSGSHADKLLEDASIKVSPSLVVEVLKRLSNAGVIALSFFTWA-EKQK 151
Query: 190 EFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKG 249
F N++ + +I+ G++ ++ +R L+N+ ++ LN+ F LIS + +
Sbjct: 152 GFKYNTESYNALIEALGKIKQFKLIRSLVNEMKSRKL-LNKDTFA----LISRRHARARK 206
Query: 250 IWRVVEV---LNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNI 301
+ +E + + G S L++ E A V K +++ + Y I
Sbjct: 207 VEEAIEAFERMEEFGFKLETSDFNRLLDTLCKSRHVEKANKVFDKMKKRRFVPDIKSYTI 266
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
L++ + + ++ +EM+ G EP +TY ++ CK + A EL EM +N
Sbjct: 267 LLEGWGKEHNLLRLDEVYLEMKYDGFEPDVVTYGILISAYCKAKKYDAAIELFHEMEAKN 326
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
C P Y I + A FF + G P T+ + + Y R +DA+
Sbjct: 327 CKPTPHVYCTLINGLGSEKRLSEALEFFERFKSCGFTPEAPTYNSLVGAYCWSMRIDDAF 386
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ V+ EM K+ PN Y +L HL
Sbjct: 387 Q-----------------------------------VIDEMRKHSAGPNSRTYDIILHHL 411
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ C ++ EMR+ P + TY+ +L L K + +A ++M
Sbjct: 369 YNSLVGAYCWSMRIDDAFQVIDEMRKHSAGPNSRTYDIILHHLIKARRTNEAYFRFQKMS 428
Query: 359 GR-NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
C P TYEI + C + D+A ++QM +G+ P + ++ I
Sbjct: 429 NEPGCEPTVSTYEIIVRMFCNEDRVDLAKQVWDQMKAKGVLPGMHMYSDLI 479
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 34/76 (44%)
Query: 324 QVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
+ GCEP TY ++ + C + A ++ ++M + P Y I C K
Sbjct: 430 EPGCEPTVSTYEIIVRMFCNEDRVDLAKQVWDQMKAKGVLPGMHMYSDLITSLCHKNKLG 489
Query: 384 VAFNFFNQMVKRGLQP 399
A +F +M+ G++P
Sbjct: 490 EACKYFQEMLDAGIRP 505
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%)
Query: 286 KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNG 345
+ +K V +NILI +C+ D L EM+ GC P +TYN ++ LC G
Sbjct: 395 ELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMG 454
Query: 346 QDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
+ +A +LL+EM C +TY I C+ + + A F+QM G+ T
Sbjct: 455 KLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFN 514
Query: 406 AFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKN 465
I G R +DA + + + SN+ Y+ + + + K + A ++L M N
Sbjct: 515 TLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTAN 574
Query: 466 GLRPNVSVYRRVLKHLHTSHQEHMA 490
G +V Y ++ L + + +A
Sbjct: 575 GFEIDVVTYGTLINGLCKAGRTQVA 599
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 100/235 (42%), Gaps = 7/235 (2%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEM 306
+V++++ Q G V +I S G + AK ++ + + + +N LI +
Sbjct: 321 KVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVAL 380
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
C + + DL E+ G P T+N ++ LCK G L EEM C PD
Sbjct: 381 CSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDE 440
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK-YVV 425
+TY I I + C +GK A + +M G T+ I R E+A + +
Sbjct: 441 VTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQ 500
Query: 426 LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKH 480
+ A S+ +L+ L K A ++ +M+K GL+P+ Y +L H
Sbjct: 501 MDAHGISRSAVTFNTLIDGLC-KAKRIDDATELIEQMVKEGLQPSNITYNSILTH 554
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 78/189 (41%), Gaps = 1/189 (0%)
Query: 294 RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACEL 353
R +N LI +C+ +L+ +M + G +P +TYN +L CK G A ++
Sbjct: 508 RSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADI 567
Query: 354 LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
LE M D +TY I C+ G+ VA M +G++P + I+ F
Sbjct: 568 LETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFR 627
Query: 414 FYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM-AKNVLSEMMKNGLRPNVS 472
DA + + + Y ++ + P+ A + L EM+ G P S
Sbjct: 628 RNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFS 687
Query: 473 VYRRVLKHL 481
+R + + L
Sbjct: 688 SFRMLAEGL 696
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 91/235 (38%), Gaps = 40/235 (17%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNILIKEM 306
RV + + G S V LI + +G E A I+K E YN + +
Sbjct: 251 RVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCL 310
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
C+ ++ M Q G +P TYN V+ L KNG+ +A ++ +M+ R C PD
Sbjct: 311 CQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDT 370
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
T+ IV C + + A + ++ +GL P D Y +
Sbjct: 371 TTFNTLIVALCSQNRLEEALDLARELTVKGLSP-------------------DVYTF--- 408
Query: 427 SADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
N+L + L + D P + + EM +G P+ Y ++ HL
Sbjct: 409 ---------NILINALCKVGD----PHLGIRLFEEMKSSGCAPDEVTYNILIDHL 450
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 51/119 (42%), Gaps = 1/119 (0%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V Y LI +C+ + LL MR G P YN V+ L + DA
Sbjct: 577 EIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALS 636
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGK-FDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
L EM PDA+TY+I CR G AF+F +MV +G P ++ +G
Sbjct: 637 LFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEG 695
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 72/167 (43%), Gaps = 2/167 (1%)
Query: 335 NYVLGVLCKNGQDADACELLEEMLGR-NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
+ +L L + A ++L L R + P YE I G FD+ +M
Sbjct: 57 DRLLTALREQADPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMR 116
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM-LYSLLASLHDKNNNP 452
+ G + +F++ Y R++DA V + + ++ +Y+ L ++ + +
Sbjct: 117 REGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRM 176
Query: 453 VMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSS 499
+ ++V +EM G++P+V ++K L +HQ A + SS
Sbjct: 177 KLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSS 223
>gi|357130244|ref|XP_003566760.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Brachypodium distachyon]
Length = 579
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 102/228 (44%), Gaps = 5/228 (2%)
Query: 271 ALIEMFSVLGLYE---MAKYVIKKTERK--VSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
AL+ S G ++ A+ V+ + E + +NIL+ +CR D + + L E+ +
Sbjct: 184 ALLAALSRAGRFDELWAARAVMARAEVRPNTHTFNILVTALCRGEDAERAQGFLEELEEQ 243
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G EP +TYN +L C+ G+ DA L M R PD +++ + + C+ G+ + A
Sbjct: 244 GFEPDVVTYNTLLSGYCRRGKLQDALHLFGVMPPRGVEPDLVSHTVLMDGLCKAGRLNDA 303
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
F++MV G+ P ++ I GY R +A ++ SS +
Sbjct: 304 RRMFDRMVHSGVSPDAIAYSVLIAGYCNEQRVREARLLLMEMVGSGLSSEGFALRAVIES 363
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
H K + N++S + K G+ + Y ++ L + H A+ L
Sbjct: 364 HVKVGKLLTCLNLVSPLRKYGVVIPLESYNCLIGALCEDMRPHAARGL 411
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 80/182 (43%), Gaps = 2/182 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE-LLEEM 357
+N L+ + R F M + P T T+N ++ LC+ G+DA+ + LEE+
Sbjct: 182 FNALLAALSRAGRFDELWAARAVMARAEVRPNTHTFNILVTALCR-GEDAERAQGFLEEL 240
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
+ PD +TY + CR GK A + F M RG++P L +H + G R
Sbjct: 241 EEQGFEPDVVTYNTLLSGYCRRGKLQDALHLFGVMPPRGVEPDLVSHTVLMDGLCKAGRL 300
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
DA + S + YS+L + + A+ +L EM+ +GL R V
Sbjct: 301 NDARRMFDRMVHSGVSPDAIAYSVLIAGYCNEQRVREARLLLMEMVGSGLSSEGFALRAV 360
Query: 478 LK 479
++
Sbjct: 361 IE 362
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C R L M + G P YN +L LC+ DA ++ EM
Sbjct: 392 YNCLIGALCEDMRPHAARGLFKWMVEDGHSPSLEMYNMILDCLCQCDSVDDALDVKVEMS 451
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
R PD TY+ + CR+GK + +M++ GLQP A A + G+
Sbjct: 452 SREVRPDFHTYQALVTCLCRLGKSLDGKSVMAEMIESGLQPNEAICTALVCGF 504
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 78/194 (40%), Gaps = 16/194 (8%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V YN L+ CRR + L M G EP +++ ++ LCK G+ DA
Sbjct: 246 EPDVVTYNTLLSGYCRRGKLQDALHLFGVMPPRGVEPDLVSHTVLMDGLCKAGRLNDARR 305
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR-------LATHA 405
+ + M+ PDAI Y + I C + A +MV GL + +H
Sbjct: 306 MFDRMVHSGVSPDAIAYSVLIAGYCNEQRVREARLLLMEMVGSGLSSEGFALRAVIESHV 365
Query: 406 AFIKGYFIFYRYEDAYKY-VVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMK 464
K KY VV+ + Y N L L ++ P A+ + M++
Sbjct: 366 KVGKLLTCLNLVSPLRKYGVVIPLESY----NCLIGALC----EDMRPHAARGLFKWMVE 417
Query: 465 NGLRPNVSVYRRVL 478
+G P++ +Y +L
Sbjct: 418 DGHSPSLEMYNMIL 431
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 34/184 (18%), Positives = 71/184 (38%)
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
+T S +L+K + R + G P T+ +N +L L + G+ +
Sbjct: 139 QTAPHPSLPGLLVKALLRHARLRDAFRAAHRAAAAGAPPDTVAFNALLAALSRAGRFDEL 198
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
M P+ T+ I + CR + A F ++ ++G +P + T+ + G
Sbjct: 199 WAARAVMARAEVRPNTHTFNILVTALCRGEDAERAQGFLEELEEQGFEPDVVTYNTLLSG 258
Query: 411 YFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
Y + +DA + + + +++L K A+ + M+ +G+ P+
Sbjct: 259 YCRRGKLQDALHLFGVMPPRGVEPDLVSHTVLMDGLCKAGRLNDARRMFDRMVHSGVSPD 318
Query: 471 VSVY 474
Y
Sbjct: 319 AIAY 322
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 77/179 (43%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y ++ C R + + LL EM G E Y V+ +LC GQ +DA +LE
Sbjct: 287 VVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLE 346
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M DA+ + I C G A F +M KRGL TH A I G
Sbjct: 347 DMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAG 406
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
++A + + DK + Y++L + K N V A V +EM+ + PNV Y
Sbjct: 407 ELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTY 465
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 103/241 (42%), Gaps = 17/241 (7%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPIT 331
++E F V + V ++ V Y L +C++ D + +LL EM G E
Sbjct: 443 MVEAFRVHN-----EMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNV 497
Query: 332 LTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQ 391
TYN ++ LCK G A ++ EM D TY I C+ G+FD A N +
Sbjct: 498 YTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQE 557
Query: 392 MVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNN 451
M+ +G++P +AT+ + G+ + R E K + +K + + Y+ L + + N
Sbjct: 558 MLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKN 617
Query: 452 PVMAKNVLSEMMKNGLRPNVSVYR---------RVLKHLHTSHQEHMAKCL---SSRYSS 499
+ M + PN + Y R +K HQE + K L +S YS+
Sbjct: 618 MKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSA 677
Query: 500 L 500
L
Sbjct: 678 L 678
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 82/211 (38%), Gaps = 35/211 (16%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ +I C + D R L EM++ G +T+ ++ LC+ G+ +A +L+EM+
Sbjct: 360 FTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMV 419
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAA------------ 406
+ D +TY + I C+ G AF N+MV R + P + T+ A
Sbjct: 420 DKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVR 479
Query: 407 -----------------------FIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
I G F E A + + + Y+ L
Sbjct: 480 AANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLI 539
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
K+ A N+L EM+ G++P+++ Y
Sbjct: 540 DTLCKSGEFDRAHNMLQEMLDKGIKPSIATY 570
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 91/229 (39%), Gaps = 8/229 (3%)
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDF 312
VV V G C VR +E +V L EMA K E + Y +I +C +
Sbjct: 287 VVTYGTMVHGYC----VRGELEN-AVKLLDEMAA---KGLESNATVYTSVIALLCNKGQV 338
Query: 313 KGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIF 372
+L +M G + + V+ C G A A L EEM R D +T+
Sbjct: 339 SDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTAL 398
Query: 373 IVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYK 432
I CR G+ A +MV +GL + T+ I GY +A++ +
Sbjct: 399 INGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRV 458
Query: 433 SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + + Y+ L+ K + A +L EM GL NV Y ++ L
Sbjct: 459 APNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGL 507
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 84/212 (39%), Gaps = 44/212 (20%)
Query: 242 SKALTKKGIWRVV-EVLNQVGGSCLVSGV---RALIEMFSVLGLYEMAKYVIKKTE---- 293
S L K+G R E+L+++ L V +LI G E A ++ + E
Sbjct: 469 SDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGH 528
Query: 294 -RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
V Y LI +C+ +F ++L EM G +P TYN ++ C +G+ +
Sbjct: 529 RTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKK 588
Query: 353 LLEEMLGRNCHPDAITYE-----------------------------------IFIVYSC 377
LLE ML +N P+ +TY I I C
Sbjct: 589 LLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHC 648
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
+ A F +M+++GL+ ++++A I+
Sbjct: 649 KARNMKEALYFHQEMIEKGLRLTASSYSALIR 680
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 62/145 (42%), Gaps = 12/145 (8%)
Query: 265 LVSGVRALIEMFSVL-----------GLYEMAKYVIKKTER-KVSYYNILIKEMCRRCDF 312
L G++ I ++VL G ++ +++++K R V YN L+K+ C +
Sbjct: 559 LDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNM 618
Query: 313 KGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIF 372
K ++ M P TYN ++ CK +A +EM+ + A +Y
Sbjct: 619 KSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSAL 678
Query: 373 IVYSCRVGKFDVAFNFFNQMVKRGL 397
I + KF A FF++M GL
Sbjct: 679 IRLLNKKKKFSEARVFFDKMRNEGL 703
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 82/181 (45%), Gaps = 1/181 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI C++ +++ M G P +TYN +L LCK G+ + E+ + M
Sbjct: 438 YNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAME 497
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C P+ ITY I + C+ K + A + +M +GL+P + + G+ +
Sbjct: 498 EKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDID 557
Query: 419 DAYKYVVLSADKYK-SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
AY+ +Y + Y+++ S + N MA + S M +G P+ YR V
Sbjct: 558 GAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVV 617
Query: 478 L 478
+
Sbjct: 618 I 618
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 84/176 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ YN LIK + ++ L+ EM + GC P TYN V+ LCK G +DA L++
Sbjct: 365 IVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVD 424
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ + + C PD TY I C+ K D A N+M +G+ P + T+ + G
Sbjct: 425 DAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAG 484
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
+ E+ + +K + + + Y+++ K A ++L EM GL+P+V
Sbjct: 485 KSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDV 540
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 89/236 (37%), Gaps = 44/236 (18%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
+ + V Y I IK C+ LL M ++GC+ + Y V+ L +G+
Sbjct: 140 RGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDH 199
Query: 350 ACELLEEMLGRNCHPDAI-----------------------------------TYEIFIV 374
A EL +EML R PD + T+ IF+
Sbjct: 200 ARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQ 259
Query: 375 YSCRVGKFDVAF---------NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV 425
CR G D A + +MV G +P T+ + I GY +DA + +
Sbjct: 260 GLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLK 319
Query: 426 LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ K Y L + K+ +P A V + + GLRP++ +Y ++K L
Sbjct: 320 DAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGL 375
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 17/173 (9%)
Query: 255 EVLNQVGGSCLVSGVRALIEMFSVL---GL-YEMAKYVIKKTERKVS----YYNILIKEM 306
E+ +++ CL V A ++ VL GL +E + + K +R V +NI ++ +
Sbjct: 202 ELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGL 261
Query: 307 CRRCDFK---------GPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
CR + L +M G EP LTYN ++ CK G DA +L++
Sbjct: 262 CREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDA 321
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ + PD TY I C+ G D A F + +GL+P + + IKG
Sbjct: 322 VFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKG 374
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 71/183 (38%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I C++ + +L + G +P TY ++ CK+G A + ++ L
Sbjct: 298 YNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGL 357
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
G+ P + Y I + G A N+M + G P + T+ I G
Sbjct: 358 GKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVS 417
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA V + K Y+ L + K A +++ M G+ P+V Y +L
Sbjct: 418 DASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLL 477
Query: 479 KHL 481
L
Sbjct: 478 NGL 480
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 79/205 (38%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
LI C+ D + + G P + YN ++ L + G A +L+ EM
Sbjct: 336 LINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENG 395
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
C P+ TY + I C++G A + + + +G P + T+ I GY + + A
Sbjct: 396 CLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSAT 455
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ V + + + Y+ L + K + M + G PN+ Y ++ L
Sbjct: 456 EMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSL 515
Query: 482 HTSHQEHMAKCLSSRYSSLSLGSSV 506
+ + + A L S L V
Sbjct: 516 CKAKKVNEAVDLLGEMKSKGLKPDV 540
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/200 (19%), Positives = 76/200 (38%), Gaps = 26/200 (13%)
Query: 248 KGIWRVVEVLNQVGGSCLVSGVRALIEMFS-------VLGLYEMAKYVIKKTE--RKVSY 298
K + V++L ++ L V + +F+ + G Y++ + + K+ + +
Sbjct: 519 KKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTAT 578
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNI++ + + L M+ GC+P TY V+ CK G + L E +
Sbjct: 579 YNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENM 638
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL-----------------QPRL 401
+ P T+ + C K A + M+++G+ P++
Sbjct: 639 EKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPETVNTIFEADKKVVAAPKI 698
Query: 402 ATHAAFIKGYFIFYRYEDAY 421
KG+ +Y YE Y
Sbjct: 699 LVEDLLKKGHIAYYTYELLY 718
>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 82/183 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ C + +LL+EM EP +TY V+ LCK + ++ +LLE+M
Sbjct: 504 YTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMR 563
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD ITY I C+ AF + M+ L+P AT+ I G + E
Sbjct: 564 AKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVE 623
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA + +V D+ + + + Y+ + H + A V +M++ G ++ Y V+
Sbjct: 624 DADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVI 683
Query: 479 KHL 481
L
Sbjct: 684 NRL 686
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 83/200 (41%)
Query: 289 IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
+K E V Y ++IK +C++ + LL +MR G P +TYN ++ CK
Sbjct: 529 LKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMR 588
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
A ELL++ML N P TY + I CR G + A + R + + I
Sbjct: 589 KAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMI 648
Query: 409 KGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLR 468
K + + + A K +K S YS + + K AK M+ +G+
Sbjct: 649 KAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVS 708
Query: 469 PNVSVYRRVLKHLHTSHQEH 488
P+ ++ +L H + H
Sbjct: 709 PDQEIFEMMLNAFHRAGHVH 728
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 82/183 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++L+ +C+R LL EM +P +TY+ ++ LCK G+ A +L +
Sbjct: 326 VILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYK 385
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM P++ + + C G A +F+ ++ L+P + + I GY
Sbjct: 386 EMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLG 445
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E+A + DK + S + ++ L KN V A+ +L + +GL P+ Y
Sbjct: 446 DVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYT 505
Query: 476 RVL 478
++
Sbjct: 506 TLM 508
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 6/141 (4%)
Query: 276 FSVLGLYEMAKYVIKKT------ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEP 329
F +LGL A+ +I+K + + Y +LI C+ + + L ++ G +
Sbjct: 265 FHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQL 324
Query: 330 ITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFF 389
+ Y+ +L LCK GQ +A +LL EM N PD +TY I I C+ GK A +
Sbjct: 325 NVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLY 384
Query: 390 NQMVKRGLQPRLATHAAFIKG 410
+M + P H+ +KG
Sbjct: 385 KEMCFNRIFPNSFAHSGILKG 405
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 79/186 (42%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V+ YNI+I + D + L +R P +T+N ++ CKN + +A LLE
Sbjct: 431 VTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLE 490
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ P A+TY + C G + +M + ++P + T+ IKG
Sbjct: 491 SIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQR 550
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ E++ + + K + + Y+ + K + A +L +M+ + L P + Y
Sbjct: 551 KLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYN 610
Query: 476 RVLKHL 481
++ L
Sbjct: 611 VLIDGL 616
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 73/162 (45%), Gaps = 7/162 (4%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
D+ +++ G T + ++ LC + DA L + G+ P +++ +
Sbjct: 136 DVYNDIKDSGTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRY 195
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSS-- 434
C++G DVA +FF M+K G+ P ++ I G + E+A + L+ D K
Sbjct: 196 CKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALE---LTNDMEKQGLQ 252
Query: 435 -SNMLYSLLASLHDKNNNPVMAKNVLSEMMKN-GLRPNVSVY 474
+ Y ++A A+ ++ +M+ + GL+P++ Y
Sbjct: 253 PDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTY 294
>gi|15237375|ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100
gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 472
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 1/161 (0%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADA-CELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
MR++G P + N ++ LC+N DA ++ EM R C PD+ TY I CR G
Sbjct: 147 MREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFG 206
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+ D A F +MV++ P + T+ + I G ++A +Y+ K + YS
Sbjct: 207 RIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYS 266
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
L K+ + A + MM G RPN+ Y ++ L
Sbjct: 267 SLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGL 307
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 79/204 (38%), Gaps = 40/204 (19%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y LI +C + L EM+ G EP TY+ ++ LCK+G+ A EL E
Sbjct: 227 VVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFE 286
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+ R C P+ +TY I C+ K A ++M +GL+P + I G+
Sbjct: 287 MMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAIS 346
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
++ + A N L EM+ G+ PN
Sbjct: 347 KFRE-----------------------------------AANFLDEMILGGITPN----- 366
Query: 476 RVLKHLHTSHQEHMAKCLSSRYSS 499
R+ ++H + + L + Y S
Sbjct: 367 RLTWNIHVKTSNEVVRGLCANYPS 390
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 8/198 (4%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K E V Y+ L+ +C+ +L M GC P +TY ++ LCK + +
Sbjct: 256 KGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQE 315
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP-------RLA 402
A ELL+ M + PDA Y I C + KF A NF ++M+ G+ P +
Sbjct: 316 AVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVK 375
Query: 403 THAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM 462
T ++G Y Y+ + + L SL+ L K A ++ E+
Sbjct: 376 TSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQ-KAVQLVDEI 434
Query: 463 MKNGLRPNVSVYRRVLKH 480
+ +G P+ ++ ++ H
Sbjct: 435 VTDGCIPSKGTWKLLIGH 452
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 5/157 (3%)
Query: 270 RALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEP 329
R + E F++ ++ V K + YN LI +C C++K LL EM P
Sbjct: 215 RQVTEAFNLF-----SEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMP 269
Query: 330 ITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFF 389
+++N V+ LCK G+ +A +++++M+ R P+ +TY + C + + D A F
Sbjct: 270 DVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVF 329
Query: 390 NQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
+ MV +G P + ++ I GY R + A Y L
Sbjct: 330 DTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXL 366
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 5/203 (2%)
Query: 276 FSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYN 335
FSVL AK + + + + LI+ +C L +M G P +TY
Sbjct: 116 FSVL-----AKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYG 170
Query: 336 YVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR 395
++ LCK G + A LL M+ +NC P+ Y I C+ + AFN F++MV +
Sbjct: 171 TLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTK 230
Query: 396 GLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMA 455
G+ P + T+ + I ++ + D + ++ + K A
Sbjct: 231 GISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEA 290
Query: 456 KNVLSEMMKNGLRPNVSVYRRVL 478
+V+ +M++ G+ PNV Y ++
Sbjct: 291 HDVVDKMIQRGVEPNVVTYTALM 313
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 72/163 (44%), Gaps = 8/163 (4%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+ G C V A I + + V K + V YN +I +C+ +L
Sbjct: 173 INGLCKVGNTSAAIRL--------LGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLF 224
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
EM G P TYN ++ LC + LL EM+ PD +++ + C+
Sbjct: 225 SEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKE 284
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
GK A + ++M++RG++P + T+ A + G+ + ++A K
Sbjct: 285 GKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVK 327
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 80/183 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ LI +C + L EM P +TY +L LCKN A+A LL+ +
Sbjct: 433 YSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIE 492
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
G N PD I I CR G+ + A + F+ + +GLQP + T++ I G +
Sbjct: 493 GSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLD 552
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A K + + + +Y+ + +NN A +L EM+ G + S +
Sbjct: 553 EASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFV 612
Query: 479 KHL 481
K L
Sbjct: 613 KML 615
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 73/180 (40%), Gaps = 1/180 (0%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M G P T + ++ C + A +L ++L PD T+ I C G
Sbjct: 86 QMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEG 145
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
K A + F++M+ G +P + T+ I G A + + K + Y+
Sbjct: 146 KIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYN 205
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL-HTSHQEHMAKCLSSRYSS 499
+ K+ A N+ SEM+ G+ P++ Y ++ L + +H+A L+ S
Sbjct: 206 TIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDS 265
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 97/258 (37%), Gaps = 47/258 (18%)
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIK---------KTER--KVSYYNI 301
VV + G CL+S + +++F + VI K +R K +Y
Sbjct: 306 VVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTX 365
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
L+ C + + M GC P ++YN ++ CK + A L EM +
Sbjct: 366 LMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQE 425
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
PD +TY I C V + A F++MV P L T Y I Y
Sbjct: 426 LIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVT-------YRILLDY---- 474
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM------------------AKNVLSEMM 463
L ++Y + + +LL ++ N +P + A+++ S +
Sbjct: 475 ----LCKNRYLAEA---MALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLS 527
Query: 464 KNGLRPNVSVYRRVLKHL 481
GL+P+V Y ++ L
Sbjct: 528 SKGLQPDVWTYSIMINGL 545
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 67/159 (42%), Gaps = 2/159 (1%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P T+ +N +L + K + L +M P+ T I I C + + AF+
Sbjct: 59 PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA-YKYVVLSADKYKSSSNMLYSLLASLHD 447
+++K G QP AT I+G + + +A + + + + ++ +L+ L
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLC- 177
Query: 448 KNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
K N A +L M++ +PNV Y ++ L Q
Sbjct: 178 KVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQ 216
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 86/188 (45%)
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
K E V Y+ +I +C+ +L EM G P TY+ ++ LC G+ +DA
Sbjct: 235 KIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDA 294
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
LL +ML R +P+ +T+ I + GK A F++M++R + P + T+ + I G
Sbjct: 295 SRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLING 354
Query: 411 YFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
+ + R ++A + L K + Y+ L + K V + +M + GL N
Sbjct: 355 FCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGN 414
Query: 471 VSVYRRVL 478
Y ++
Sbjct: 415 TVTYTTLI 422
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 1/161 (0%)
Query: 319 LVEMRQV-GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
LVE V GC+P +TY V+ LCK G+ A LL +M D + Y I C
Sbjct: 192 LVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLC 251
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ D A N F +M +G++P + T+++ I + R+ DA + + ++ + + +
Sbjct: 252 KYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVV 311
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
++ L K + A+ + EM++ + PN+ Y ++
Sbjct: 312 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLI 352
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 4/182 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNI+I +CRR +L +M ++G P +T N +L C + ++A L+++M+
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 162
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD +T+ + + K A +MV +G QP L T+ A I G + R E
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING--LCKRGE 220
Query: 419 DAYKYVVLSA-DKYKSSSN-MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
+L+ +K K ++ ++YS + K + A N+ +EM G+RP+V Y
Sbjct: 221 PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSS 280
Query: 477 VL 478
++
Sbjct: 281 LI 282
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 76/184 (41%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI + D + + +M G P +TYN +L LCKNG+ A + E +
Sbjct: 418 YTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 477
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD TY I C+ GK + ++ F + +G++P + + I G+ E
Sbjct: 478 KSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKE 537
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+AY + + + Y+ L H ++ + + ++ EM + S Y V
Sbjct: 538 EAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVT 597
Query: 479 KHLH 482
LH
Sbjct: 598 DMLH 601
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 73/185 (39%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
+K V +N LI + L EM Q +P +TYN ++ C + + +
Sbjct: 304 RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE 363
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A ++ M+ ++C PD +TY I C+ K F M +RGL T+ I
Sbjct: 364 AQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIH 423
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
G+F ++A + M Y+ L KN A V + K+ + P
Sbjct: 424 GFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEP 483
Query: 470 NVSVY 474
++ Y
Sbjct: 484 DIYTY 488
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 67/161 (41%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M +G TYN ++ LC+ Q + A +L +M+ P +T + C
Sbjct: 90 KMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGN 149
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+ A +QMV+ G QP T + G F + +A V K + Y
Sbjct: 150 RISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYG 209
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + K P +A N+L++M K + +V +Y V+ L
Sbjct: 210 AVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSL 250
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 83/204 (40%), Gaps = 1/204 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI C+ +L +M + G T+TY ++ + +A + +
Sbjct: 380 VVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFK 439
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M+ HP+ +TY + C+ GK + A F + K ++P + T+ +G
Sbjct: 440 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAG 499
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ ED + + K + Y+ + S K A + +M ++G P+ Y
Sbjct: 500 KVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYN 559
Query: 476 RVLK-HLHTSHQEHMAKCLSSRYS 498
+++ HL + A+ + S
Sbjct: 560 TLIRAHLRDGDKAASAELIKEMRS 583
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Query: 289 IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
+K + V YN +I C++ + L ++M++ G P + TYN ++ ++G A
Sbjct: 513 LKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKA 572
Query: 349 DACELLEEMLGRNCH--PDAITYEIFIVYSCRVGKFDVAF 386
+ EL++EM R+C DA TY + + G+ D F
Sbjct: 573 ASAELIKEM--RSCRFAGDASTYGL-VTDMLHDGRLDKGF 609
>gi|255660802|gb|ACU25570.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 418
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 85/183 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ +L EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVVLAMEIYK 265
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G A + ++M +GL+P T+ I G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEG 325
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A +Y + ++ Y+ L S + V A+ +L EM+ GL+P + Y
Sbjct: 326 DLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 385
Query: 476 RVL 478
++
Sbjct: 386 MII 388
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +N L+ + D L M+ G +P TY+ ++ LCK + DA EL +
Sbjct: 171 VVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFD 230
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
EML P+ +T+ I C+ G+ +A + QM+ + L P L T+ I G
Sbjct: 231 EMLDNGLVPNGVTFTTLIDGHCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYG 285
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 79/188 (42%), Gaps = 14/188 (7%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ + + + + + + + G P +++N ++ K G + L M
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
PD TY + I C+ K D A F++M+ GL P T I G+ R
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR- 256
Query: 418 EDAYKYVVLSADKYK-------SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
VVL+ + YK S + Y+ L K + A++++ EM GL+P+
Sbjct: 257 ------VVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310
Query: 471 VSVYRRVL 478
Y ++
Sbjct: 311 KITYTTLI 318
>gi|297808491|ref|XP_002872129.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297317966|gb|EFH48388.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 588
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 5/231 (2%)
Query: 269 VRALIEMFSVLGLYE-MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGC 327
+R L +++ Y M V + V YN LI +C+ F DL M+ VG
Sbjct: 305 IRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKAGKFDVACDLHGTMQNVGV 364
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
P ++Y ++ LC G A E L+ ML R+ P+ + + + I R G A +
Sbjct: 365 APDQISYKVIIQGLCIQGDVDRANEFLQSMLKRSLLPEVLLWNVVIDGYGRYGDTSCALS 424
Query: 388 FFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY--KYVVLSADKYKSSSNMLYSLLASL 445
N M+ G++P + T+ A I GY R DA+ K + S + ++ Y+LL
Sbjct: 425 VLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTT--YNLLVGA 482
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSR 496
+ +A + EM+K G +P++ Y +++ L + A+ L SR
Sbjct: 483 ACTLGHLRLAFQLYDEMLKRGCQPDIITYTELVRGLCWKGRLKEAESLLSR 533
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 72/151 (47%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
EM Q ++ YN ++ LC +G A + +M+ R +PD TY I C+ G
Sbjct: 288 EMSQKNVPTDSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKAG 347
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
KFDVA + M G+ P ++ I+G I + A +++ + +L++
Sbjct: 348 KFDVACDLHGTMQNVGVAPDQISYKVIIQGLCIQGDVDRANEFLQSMLKRSLLPEVLLWN 407
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
++ + + + A +VL+ M+ G++PNV
Sbjct: 408 VVIDGYGRYGDTSCALSVLNLMLSYGVKPNV 438
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 46/101 (45%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
EMR P T TYN ++G C G A +L +EML R C PD ITY + C G
Sbjct: 463 EMRSTKIHPDTTTYNLLVGAACTLGHLRLAFQLYDEMLKRGCQPDIITYTELVRGLCWKG 522
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
+ A + ++M G+ +K Y R ++AY
Sbjct: 523 RLKEAESLLSRMQVSGITMDHVPFLILVKKYTRLQRPDEAY 563
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 65/153 (42%), Gaps = 12/153 (7%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+ G C V+ V + +FS L KY IK NI++ +C++ L
Sbjct: 196 IKGLCSVNNVDKALYLFSTLN-----KYGIKPNRVTC---NIIVHALCQKGVIGNNNTKL 247
Query: 320 VEM----RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
+E QV +T ++ KNG A E+ +EM +N D++ Y + I
Sbjct: 248 LEEILDSSQVNAPLDIVTCTILMDSCFKNGNVVQALEVWKEMSQKNVPTDSVVYNVIIRG 307
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
C G A+ F MVKRG+ P + T+ I
Sbjct: 308 LCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLI 340
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 87/198 (43%), Gaps = 8/198 (4%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
+ +S ++ +++++C + L +M + G P + +N++L LCK G A
Sbjct: 116 DDSLSIHSSIMRDLCLQGKMDAALWLREKMLRSGFIPGLIMHNHLLNGLCKLGYIEKADG 175
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT-----HAAF 407
L+ EM P+ ++Y I C V D A F+ + K G++P T HA
Sbjct: 176 LVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFSTLNKYGIKPNRVTCNIIVHALC 235
Query: 408 IKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY-SLLASLHDKNNNPVMAKNVLSEMMKNG 466
KG + +L + + + +++ ++L KN N V A V EM +
Sbjct: 236 QKG--VIGNNNTKLLEEILDSSQVNAPLDIVTCTILMDSCFKNGNVVQALEVWKEMSQKN 293
Query: 467 LRPNVSVYRRVLKHLHTS 484
+ + VY +++ L +S
Sbjct: 294 VPTDSVVYNVIIRGLCSS 311
>gi|255660816|gb|ACU25577.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 418
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 86/183 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ +L EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 206 VYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G A + ++M +GL+P T+ I G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEG 325
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A++Y + ++ Y+ L S + V A+ +L EM+ GL+P + Y
Sbjct: 326 DLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 385
Query: 476 RVL 478
++
Sbjct: 386 MII 388
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 77/181 (42%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ C+ + K + + + + G P +++N ++ + G + L M
Sbjct: 138 FFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRLKNAM 197
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
PD TY + I C+ K D A FN+M+ GL P T I G+ R
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRV 257
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ A + + S + Y+ L K + A++++ EM GL+P+ Y +
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTL 317
Query: 478 L 478
+
Sbjct: 318 I 318
>gi|255570179|ref|XP_002526050.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534631|gb|EEF36327.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 284
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 87/186 (46%), Gaps = 8/186 (4%)
Query: 250 IWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIK 304
IW+ V L V S A+I F +G+ +AK + + + YN+L+
Sbjct: 33 IWKRVNELGFVPDSITYG---AMIRGFCRMGMLNVAKGLFTRMRALGLSPALCDYNMLMA 89
Query: 305 EMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHP 364
+C+ + R L E+R CE ++N ++ K G A ELL++ML +P
Sbjct: 90 SLCKESSLEQARKLFQELRNSNCELDVFSFNIMIYGTLKAGDIQSAKELLKDMLQMGVNP 149
Query: 365 DAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV 424
+A TY I I + ++G D A FN+M+ G P + + + +KG+ + E+ +
Sbjct: 150 NAFTYFILINWFSKLGLLDEAKEAFNRMIGSGFIPSIHVYDSLLKGFSSMGKAEETINLL 209
Query: 425 VLSADK 430
L ADK
Sbjct: 210 QLMADK 215
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 45/105 (42%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V +NI+I + D + ++LL +M Q+G P TY ++ K G +A E
Sbjct: 113 ELDVFSFNIMIYGTLKAGDIQSAKELLKDMLQMGVNPNAFTYFILINWFSKLGLLDEAKE 172
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
M+G P Y+ + +GK + N M +G+
Sbjct: 173 AFNRMIGSGFIPSIHVYDSLLKGFSSMGKAEETINLLQLMADKGV 217
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 12/149 (8%)
Query: 332 LTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQ 391
+T N ++G K G ++ + + + PD+ITY I CR+G +VA F +
Sbjct: 12 VTCNVLIGEYLKAGLINESMRIWKRVNELGFVPDSITYGAMIRGFCRMGMLNVAKGLFTR 71
Query: 392 MVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV------LSADKYKSSSNMLYSLLASL 445
M GL P L + + E A K D + S + M+Y L
Sbjct: 72 MRALGLSPALCDYNMLMASLCKESSLEQARKLFQELRNSNCELDVF-SFNIMIYGTL--- 127
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
K + AK +L +M++ G+ PN Y
Sbjct: 128 --KAGDIQSAKELLKDMLQMGVNPNAFTY 154
>gi|302797282|ref|XP_002980402.1| hypothetical protein SELMODRAFT_32257 [Selaginella moellendorffii]
gi|300152018|gb|EFJ18662.1| hypothetical protein SELMODRAFT_32257 [Selaginella moellendorffii]
Length = 457
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 72/125 (57%), Gaps = 2/125 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY-NYVLGVLCKNGQDADACELLEEM 357
YN+L+ + ++ + R++ +EM++ GCEP +TY Y+LG LCK G+ DA + +EM
Sbjct: 177 YNVLLTGLKKKDGVEEMREMFLEMKEKGCEPNLVTYCTYILG-LCKAGRVDDAMVVKKEM 235
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
+ ++C PD + Y I I C+VGK +M+++ LQP + ++ + RY
Sbjct: 236 IQKSCSPDNVVYSILINAFCKVGKIYEGEKLLAEMLEKKLQPDVVCFSSLVDCLDKAGRY 295
Query: 418 EDAYK 422
DAY+
Sbjct: 296 GDAYR 300
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 64/150 (42%)
Query: 324 QVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
+ GC P T YN +L L K + E+ EM + C P+ +TY +I+ C+ G+ D
Sbjct: 167 EYGCPPNTYAYNVLLTGLKKKDGVEEMREMFLEMKEKGCEPNLVTYCTYILGLCKAGRVD 226
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
A +M+++ P ++ I + + + K + +K + +S L
Sbjct: 227 DAMVVKKEMIQKSCSPDNVVYSILINAFCKVGKIYEGEKLLAEMLEKKLQPDVVCFSSLV 286
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
DK A + MM+ G +P+ +
Sbjct: 287 DCLDKAGRYGDAYRLFRRMMEQGCKPDAVI 316
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%), Gaps = 2/144 (1%)
Query: 333 TYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
TY V+ LC+ + DA +L EM RN P+ TY + I R + AF+ F ++
Sbjct: 69 TYLCVMMGLCRGKRSIDAIGVLREMQKRNVVPELATYLMLIEGLGRDHRVKEAFDLFQEI 128
Query: 393 VKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSAD-KYKSSSNM-LYSLLASLHDKNN 450
RG + ++++ + G + +++A + + +Y N Y++L + K +
Sbjct: 129 HARGFTAKASSYSYIVCGLAKYGYFDEAAIQLFRKMEGEYGCPPNTYAYNVLLTGLKKKD 188
Query: 451 NPVMAKNVLSEMMKNGLRPNVSVY 474
+ + EM + G PN+ Y
Sbjct: 189 GVEEMREMFLEMKEKGCEPNLVTY 212
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLC--KNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
LL M G P+ +Y +L LC KN +A +L +EM+ PD +YEI +
Sbjct: 372 LLKTMASRGSRPLQCSYATLLRELCRRKNAVEALELDLFQEMIESGRIPDVNSYEILVEA 431
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQP 399
C+ GK F Q++ G P
Sbjct: 432 LCKAGKIFQGHELFKQLISLGFIP 455
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 89/200 (44%)
Query: 279 LGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
L L + K K E V YN +I +C+ +L EM G P TY+ ++
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
LC G+ +DA LL +M+ R +P+ +T+ I + GK A +++M+KR +
Sbjct: 301 SCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360
Query: 399 PRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNV 458
P + T+++ I G+ + R ++A L K + + YS L K +
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMEL 420
Query: 459 LSEMMKNGLRPNVSVYRRVL 478
EM + GL N Y ++
Sbjct: 421 FREMSQRGLVGNTVTYTTLI 440
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 86/183 (46%), Gaps = 4/183 (2%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L+ +M Q GC+P +TY V+ LCK G A LL++M D + Y I C
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLC 269
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ D A N F +M +G++P + T+++ I + R+ DA + + ++ + + +
Sbjct: 270 KYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVV 329
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK----HLHTSHQEHMAKCL 493
+S L K V A+ + EM+K + P++ Y ++ H +HM + +
Sbjct: 330 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 389
Query: 494 SSR 496
S+
Sbjct: 390 ISK 392
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 6/184 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ++ +C+R D LL +M + E + YN ++ LCK DA L EM
Sbjct: 226 YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMD 285
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD TY I C G++ A + M++R + P + T +A I + +
Sbjct: 286 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 345
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLAS---LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+A K + YS L + +HD+ + AK++ M+ PNV Y
Sbjct: 346 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE---AKHMFELMISKDCFPNVVTYS 402
Query: 476 RVLK 479
++K
Sbjct: 403 TLIK 406
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 87/182 (47%), Gaps = 4/182 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+I I CRR +L +M ++G EP +T + +L C + + +DA L+++M+
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD T+ I K A +QMV+RG QP L T+ + G + R +
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG--LCKRGD 238
Query: 419 -DAYKYVVLSADKYKSSSN-MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
D ++ +K K ++ ++Y+ + K + A N+ +EM G+RP+V Y
Sbjct: 239 IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSS 298
Query: 477 VL 478
++
Sbjct: 299 LI 300
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 76/184 (41%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI + D + + +M VG P LTYN +L LCKNG+ A A + E +
Sbjct: 436 YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ 495
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD TY I I C+ GK + + F + +G+ P + + I G+ E
Sbjct: 496 RSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKE 555
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + + ++ Y+ L ++ + + ++ EM G + S V
Sbjct: 556 EADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVT 615
Query: 479 KHLH 482
LH
Sbjct: 616 NMLH 619
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 94/200 (47%), Gaps = 3/200 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL- 354
V Y+ LIK C+ + +L EM Q G T+TY ++ + +D D +++
Sbjct: 398 VVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQ-ARDCDNAQMVF 456
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
++M+ HP+ +TY I + C+ GK A F + + ++P + T+ I+G
Sbjct: 457 KQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKA 516
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ ED ++ + K S + + Y+ + S + + A ++L +M ++G PN Y
Sbjct: 517 GKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTY 576
Query: 475 RRVLK-HLHTSHQEHMAKCL 493
+++ L +E A+ +
Sbjct: 577 NTLIRARLRDGDREASAELI 596
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 6/168 (3%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
DL +M + P + +N +L + K + L E+M D TY IFI
Sbjct: 69 DLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCF 128
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSAD-KYKSSS 435
CR + +A +M+K G +P + T ++ + GY R DA V + YK +
Sbjct: 129 CRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188
Query: 436 NMLYSLLAS--LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+L+ LH+K + V ++ +M++ G +P++ Y V+ L
Sbjct: 189 FTFTTLIHGLFLHNKASEAVA---LVDQMVQRGCQPDLVTYGTVVNGL 233
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 81/196 (41%), Gaps = 2/196 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N L+ + + F+ L +M+ +G TY+ + C+ Q + A +L +M+
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD +T + C + A +QMV+ G +P T I G F+ +
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A V + + Y + + K + +A ++L +M K + +V +Y ++
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265
Query: 479 KHLHTSHQEHMAKCLS 494
L +HM L+
Sbjct: 266 DGL--CKYKHMDDALN 279
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 47/111 (42%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E + YNI+I+ MC+ + +L + G P + YN ++ C+ G +A
Sbjct: 500 EPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADS 559
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
LL++M P++ TY I R G + + +M G +T
Sbjct: 560 LLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 610
>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Brachypodium distachyon]
Length = 676
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 93/196 (47%), Gaps = 1/196 (0%)
Query: 280 GLYEMAKYVIKKTERKVSYYNILIKEMCR-RCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
Y + + V K + V + LI +C+ + R L ++ +P TY ++
Sbjct: 274 AFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMI 333
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
G CK G+ A A LL M+ + P+ TY I C+ G F+ AF N+M + G Q
Sbjct: 334 GGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQ 393
Query: 399 PRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNV 458
P + T+ A I G + ++AYK + ++ ++ + Y+++ + H K + A ++
Sbjct: 394 PNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDL 453
Query: 459 LSEMMKNGLRPNVSVY 474
+ M +NG P++ Y
Sbjct: 454 FNRMAENGCHPDIHTY 469
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 3/178 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ LI CR + LL M+ G T ++ V C+ G+ D EL ML
Sbjct: 188 FRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSELFRRML 247
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ + Y +I C+ AF +MV +GL+P + TH + I G E
Sbjct: 248 EMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTE 307
Query: 419 DAYKYV--VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
A++ ++ + YK + + Y+++ + K A+ +L M++ GL PN + Y
Sbjct: 308 RAFRLFLKLIKSSSYKPNVHT-YTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTY 364
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ++I E C++ DL M + GC P TY ++ C+ Q ++ +L ++ L
Sbjct: 434 YTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCL 493
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P TY I C+VGK A F +MV+ G Q T+ A I G R E
Sbjct: 494 AIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLE 553
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A DK + LA + + V+A ++L + K V+V R L
Sbjct: 554 EARALYEGMLDKRLVPCEVTPVTLAFEYCRREKAVVAVSILDRLDKRRKNHTVNVLVRKL 613
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 49/113 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C++ + +L G + +TY ++ CK G A +L M
Sbjct: 399 YNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMA 458
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
CHPD TY I C+ + + + F++ + L P T+ + I GY
Sbjct: 459 ENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGY 511
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 67/166 (40%), Gaps = 1/166 (0%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN-CHPDAITYEIFIVY 375
D++ EMR G T N+VL G A A ++ + M+ R PDA ++ IV
Sbjct: 135 DMVFEMRSHGLPFCVETANWVLRAGLDTGSFAYARKVFDGMVTRGGLLPDARSFRALIVG 194
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
CR G+ + M +G AT ++ + R+ D + + +
Sbjct: 195 CCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSELFRRMLEMGTPPN 254
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ Y+ K A VL EM+ GL+PNV + ++ L
Sbjct: 255 VVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGL 300
>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Brachypodium distachyon]
Length = 597
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 55/110 (50%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNILI CRR +LL EM++ G +P TYN +L LCK G ELL +M+
Sbjct: 391 YNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMI 450
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
C P +T+ I C+VG+ D A F M + G+QP + I
Sbjct: 451 DGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLI 500
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 2/170 (1%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M++ G + YN ++G C+ + +A ELL EM PD TY + C+ G
Sbjct: 379 MKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGD 438
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN-MLYS 440
F +M+ G +P + T I GY + ++A + + S D+ N ++Y+
Sbjct: 439 FLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALR-IFRSMDESGIQPNTVIYN 497
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
L K+ + +A + EM + + NV+ + +LK L + A
Sbjct: 498 TLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKA 547
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 8/151 (5%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+GG C + L E + +LG EM + ++ V YN L+ +C+ DF +LL
Sbjct: 395 IGGFCRR---KRLNEAYELLG--EMKEAGLQP---DVYTYNTLLSGLCKAGDFLAVDELL 446
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
+M GC P +T+ ++ CK GQ +A + M P+ + Y I + C+
Sbjct: 447 GKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKS 506
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+A F++M ++ + + T A +KG
Sbjct: 507 RDTSLAIELFDEMREKHVPANVTTFNALLKG 537
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 124/333 (37%), Gaps = 26/333 (7%)
Query: 168 RVLNSEKVSALCFLKYMREIMPEFYKNSDICSL--VIDNCGRLDDYETMRQLLNDFNVYQ 225
++L+ S+ +++R+ + D + ++D + D M QL
Sbjct: 108 KILSRSPSSSADAARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFASMRDAS 167
Query: 226 VCLNEKAFGFLPVLISSKALTKKG-IWRVVEVLNQVGGS----CL-VSGVRALIEMFSVL 279
V N +G L K L K G + + VL+ + G C V + +++
Sbjct: 168 VRPNVVTYGIL-----VKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKT 222
Query: 280 GLYEMAKYVIKKTERKVS-------YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITL 332
G + A +++ R V YN L CR + +L+ +M + P +
Sbjct: 223 GRLQQAVKFVEERMRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAV 282
Query: 333 TYNYVLGVLCKNGQDADACELLEEMLGRNCHPD----AITYEIFIVYSCRVGKFDVAFNF 388
T N ++G LC G+ A E E R P+ A+TY + VA
Sbjct: 283 TLNTIVGGLCWVGRVGAALEFFREK--RTVWPEARGNAVTYSTLVGAFLHTNNVGVAMEL 340
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
F++MV G P + I G R +DA+ Y++L +
Sbjct: 341 FHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCR 400
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A +L EM + GL+P+V Y +L L
Sbjct: 401 RKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGL 433
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 87/231 (37%), Gaps = 6/231 (2%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
VGG C V V A +E F + V + Y+ L+ + +L
Sbjct: 288 VGGLCWVGRVGAALEFF------REKRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELF 341
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
EM G P + Y ++ L + G+ DA + M DA Y I I CR
Sbjct: 342 HEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRR 401
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
+ + A+ +M + GLQP + T+ + G + + + D S + +
Sbjct: 402 KRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTF 461
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
L + K A + M ++G++PN +Y ++ L S +A
Sbjct: 462 GTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLA 512
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 77/192 (40%), Gaps = 19/192 (9%)
Query: 215 RQLLNDFNVYQVCLNEKAFGFLP------VLISSKALTKKGIWRVVEVL--NQVGGSCLV 266
R+ LN+ Y++ K G P L+S L K G + V+ L + G C
Sbjct: 401 RKRLNE--AYELLGEMKEAGLQPDVYTYNTLLS--GLCKAGDFLAVDELLGKMIDGGCRP 456
Query: 267 SGVR--ALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLL 319
S V LI + +G + A + + + YN LI +C+ D +L
Sbjct: 457 SVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELF 516
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
EMR+ T+N +L L A EL++ M C PD +T +I + + +
Sbjct: 517 DEMREKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMREGRCTPDYVTIDILMEWLPVI 576
Query: 380 GKFDVAFNFFNQ 391
G+ D +F
Sbjct: 577 GETDRLKHFMQH 588
>gi|307135890|gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 566
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 88/186 (47%), Gaps = 1/186 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YNIL++ +C ++ LL EM P T+TYN ++G L +G+ A E+LE
Sbjct: 272 VVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGSLALHGRTEHALEVLE 331
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM+ P A +Y I + C+ GK D+ +QM+ R P T+ A I
Sbjct: 332 EMIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYRHCNPNEGTYNA-IATLCEEG 390
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
++A+ + +K SS+ Y ++ + + N A +L EM K G P+ Y
Sbjct: 391 MVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYS 450
Query: 476 RVLKHL 481
+++ L
Sbjct: 451 SLIRGL 456
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 94/200 (47%), Gaps = 7/200 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L++ +C + LL + Q G P TY+++L K +A +LL+E++
Sbjct: 170 YNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEII 229
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+ ++Y + + C+ G+ + A F ++ +G P + ++ ++ R+E
Sbjct: 230 AKGGEPNLVSYNVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWE 289
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLA---SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+A + +S S + Y++L +LH + + A VL EM++ +P S Y
Sbjct: 290 EANVLLAEMNGDERSPSTVTYNILIGSLALHGRTEH---ALEVLEEMIRARFKPTASSYN 346
Query: 476 RVLKHL-HTSHQEHMAKCLS 494
++ HL + + KCL
Sbjct: 347 PIIAHLCKDGKLDLVVKCLD 366
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
+Y I+I +CR+ + LL EM + G P + TY+ ++ LC G +A E+ M
Sbjct: 413 FYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVM 472
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
N PD Y I+ C+ + D+A + F MV +G P T+ ++G
Sbjct: 473 -EENNKPDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLPNETTYTILVEG 524
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 113/273 (41%), Gaps = 25/273 (9%)
Query: 234 GFLPVLISS----KALTKKGIWRVVEVL----NQVGGSCLVSGVRALIEMFSVLGLYEMA 285
GF P ++S ++L +G W VL N S LI ++ G E A
Sbjct: 267 GFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGSLALHGRTEHA 326
Query: 286 KYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLV----EMRQVGCEPITLTYNY 336
V+++ R S YN +I +C+ G DL+V +M C P TYN
Sbjct: 327 LEVLEEMIRARFKPTASSYNPIIAHLCK----DGKLDLVVKCLDQMMYRHCNPNEGTYN- 381
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
+ LC+ G +A +++ + + Y+I I CR G AF +M K G
Sbjct: 382 AIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYG 441
Query: 397 LQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAK 456
P T+++ I+G + +A + + + K + SL+ K+ +A
Sbjct: 442 FTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENNKPDTENYNSLILGCC-KSRRTDLAL 500
Query: 457 NVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHM 489
+V M+ G PN + Y +++ + H++ M
Sbjct: 501 DVFEIMVGKGYLPNETTYTILVEGI--IHEKEM 531
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 79/180 (43%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
L+ ++C+ C + ++ M G P +Y +++ LC+ G A +L+++M
Sbjct: 103 LLYDLCKACKMRKAIKVMEMMIGSGIIPDASSYTFLVSSLCRKGNVGYAMQLVDKMEEYG 162
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
+ +TY + C G + ++++++GL P T++ ++ + ++A
Sbjct: 163 YPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAS 222
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K + K + + Y++L + K A + E+ G PNV Y +L+ L
Sbjct: 223 KLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSL 282
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 64/160 (40%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M + G +P +L LCK + A +++E M+G PDA +Y + CR G
Sbjct: 88 MVEKGQKPDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGIIPDASSYTFLVSSLCRKGN 147
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
A ++M + G T+ + ++G + + + + K + YS
Sbjct: 148 VGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSF 207
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
L K A +L E++ G PN+ Y +L L
Sbjct: 208 LLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGL 247
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 13/254 (5%)
Query: 234 GFLPVLISSKALTKK--------GIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMA 285
G +P ++ A+ G RV E + G V A+++ F +G A
Sbjct: 295 GLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKA 354
Query: 286 KYVIKK-----TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
++ + E V YN+LI+ C + LL M G TYN ++
Sbjct: 355 MALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDA 414
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
LCK G+ +AC L + + R P+++T+ I C+ GKFDVA F +MV G P
Sbjct: 415 LCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPD 474
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
T++ FI+ + ++ K S + Y+++ K N +A +
Sbjct: 475 TYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWG 534
Query: 461 EMMKNGLRPNVSVY 474
+M+ G P+V Y
Sbjct: 535 QMVSLGCSPDVVTY 548
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 4/171 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI+ +CRR D + + L M + G P T+N ++ C+ Q A +L ++M
Sbjct: 132 YNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMP 191
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R DA++Y I C G+ D A F ++ QP + THAA +KG R E
Sbjct: 192 LRGFSQDAVSYAALIEGFCETGRVDEALELFRELE----QPDMYTHAALVKGLCDARRGE 247
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
+ + + + Y+ L L + A+ +L+EM NGL P
Sbjct: 248 EGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVP 298
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 83/202 (41%)
Query: 280 GLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
GLY + K Y L+ CR + +L EM G P +T V+
Sbjct: 249 GLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVN 308
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
C+ G+ + A + E M + C P+ TY + C VGK A +QM + G++P
Sbjct: 309 AYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEP 368
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
+ T+ I+G I E A++ + L ++ Y++L K A ++
Sbjct: 369 DVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLF 428
Query: 460 SEMMKNGLRPNVSVYRRVLKHL 481
+ G+RPN + V+ L
Sbjct: 429 DGLEYRGIRPNSVTFNTVINGL 450
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 67/172 (38%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N +I +C+ F L +M GC P T TY+ + LCK + ++EML
Sbjct: 443 FNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEML 502
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
++ P + Y I I + + +A + QMV G P + T+ ++ Y R
Sbjct: 503 QKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLH 562
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
+A V+ M Y+ L H A +L M PN
Sbjct: 563 EAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPN 614
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 70/183 (38%), Gaps = 8/183 (4%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI+ C +L E+ Q P T+ ++ LC + + +L++M
Sbjct: 202 YAALIEGFCETGRVDEALELFRELEQ----PDMYTHAALVKGLCDARRGEEGLYMLQKMK 257
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P Y + CR K + A N+M GL P T A + Y R
Sbjct: 258 ELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMS 317
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNN--NPVMAKNVLSEMMKNGLRPNVSVYRR 476
A + V + K K +++ A + N A +L +M + G+ P+V Y
Sbjct: 318 GAVR--VFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNL 375
Query: 477 VLK 479
+++
Sbjct: 376 LIR 378
>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
Length = 556
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 83/159 (52%), Gaps = 8/159 (5%)
Query: 256 VLNQVGGSCLVSGVRAL---IEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDF 312
+L++V L++G+ + I+ F +L EM V+K + YN++I C+
Sbjct: 186 LLDEVCYGTLINGLCKIGRSIDAFQLL--QEMEGQVVKPN---IVIYNMIIDSFCKDELT 240
Query: 313 KGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIF 372
RDL +++ +G +P LTY ++ C+ GQ + +L+ EM+ +N +P+ T+ +
Sbjct: 241 CKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVL 300
Query: 373 IVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
I CR GK A FN MVKRG QP + T I G+
Sbjct: 301 IDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGH 339
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 82/191 (42%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
M + V K V +N+LI CR+ + + M + G +P +T+N ++ C
Sbjct: 282 MCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCL 341
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
+G +A +L + + R PD +Y I I+ C+ + D A + FN+M + + +
Sbjct: 342 HGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVL 401
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
+++ I G R A++ + + + Y++L K + M + M
Sbjct: 402 YSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMC 461
Query: 464 KNGLRPNVSVY 474
GL P V Y
Sbjct: 462 GKGLTPTVLTY 472
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 77/189 (40%)
Query: 286 KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNG 345
K V + + Y LI+ CR + + L+ EM P T+N ++ C+ G
Sbjct: 249 KIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKG 308
Query: 346 QDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
+ +A + M+ R PD +T+ I C G A F+ + +RG+ P + ++
Sbjct: 309 KMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYT 368
Query: 406 AFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKN 465
I GY R ++A K +LYS L K+ A + S + +
Sbjct: 369 ILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINND 428
Query: 466 GLRPNVSVY 474
G PNV Y
Sbjct: 429 GPPPNVITY 437
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YNILI C+ D +L M G P LTYN ++ CK+ + +A LL
Sbjct: 434 VITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLS 493
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
M +N PD+ITY C+ G+ A+ F M G +AT+ + +
Sbjct: 494 VMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAF 549
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 78/186 (41%), Gaps = 6/186 (3%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLT---YNYVLGVLCKNGQDADACE 352
V Y ILI C+ L EMR C+ + L Y+ ++ LCK+G+ + A E
Sbjct: 364 VWSYTILIIGYCKCKRIDEAVSLFNEMR---CKNMVLDIVLYSSLIDGLCKSGRISYAWE 420
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
L + P+ ITY I I C++ D+ F M +GL P + T+ I GY
Sbjct: 421 LFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYC 480
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
R +A + + K + ++ Y+ L K+ A + M G +V+
Sbjct: 481 KSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVA 540
Query: 473 VYRRVL 478
Y +L
Sbjct: 541 TYNVLL 546
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 66/150 (44%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P + +N ++G + K A LL++M+ + P T I+I C +G+ AF+
Sbjct: 82 PSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSV 141
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
++KRG QP T +KG I + A + A + + Y L + K
Sbjct: 142 LGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCK 201
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ A +L EM ++PN+ +Y ++
Sbjct: 202 IGRSIDAFQLLQEMEGQVVKPNIVIYNMII 231
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 57/133 (42%), Gaps = 5/133 (3%)
Query: 251 WRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKE 305
W + +N G V LI+ F + +M + K K V YNILI
Sbjct: 419 WELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILING 478
Query: 306 MCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPD 365
C+ + +LL M+ P ++TYN + LCK+G+ +DA EL + M D
Sbjct: 479 YCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVD 538
Query: 366 AITYEIFIVYSCR 378
TY + + C+
Sbjct: 539 VATYNVLLDAFCK 551
>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 2/189 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPR-DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
V YN L+ + C +C +LL EMR+ G + +T+N ++ LC+ GQ +A L
Sbjct: 350 VVTYNTLV-DACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRL 408
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
E M PD ITY I SC+ G AF ++MV+ GL+ T +
Sbjct: 409 EMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKE 468
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
RYE+A + + + + Y + + + K P A + EM+K L P++S Y
Sbjct: 469 KRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTY 528
Query: 475 RRVLKHLHT 483
++K L T
Sbjct: 529 NTLIKGLST 537
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 90/201 (44%), Gaps = 10/201 (4%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L EM + P TYN ++ L G+ +A + L E++ PD TY I I C
Sbjct: 512 LWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYC 571
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ G + AF F N+MV+ +P + T + G ++ R E A K +K K +
Sbjct: 572 KEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVI 631
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTS----------HQE 487
Y+ L K+N+ A ++M GL+P+V Y +L L + H+
Sbjct: 632 TYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKL 691
Query: 488 HMAKCLSSRYSSLSLGSSVEA 508
+ + L R+ S+ SSVEA
Sbjct: 692 NESGKLYGRFFYPSIKSSVEA 712
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 78/181 (43%), Gaps = 1/181 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ CR+ R LL M++ G P TYN ++ + G A +++E M
Sbjct: 247 YNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMT 306
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL-QPRLATHAAFIKGYFIFYRY 417
PD TY + C+ GK D AF ++M + G+ P + T+ + F R
Sbjct: 307 AFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRS 366
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
DA + +K SS + ++++ + A L M + GL P+V Y +
Sbjct: 367 SDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTL 426
Query: 478 L 478
+
Sbjct: 427 I 427
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 3/172 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM- 357
YN L+ R K D++ M G EP TYN + LC+ G+ +A +L +EM
Sbjct: 282 YNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEME 341
Query: 358 -LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
LG PD +TY + + + A N +M ++G++ L TH +KG +
Sbjct: 342 QLGI-VSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQ 400
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLR 468
E+A + + ++ + + Y+ L K N A ++ EM+++GL+
Sbjct: 401 LEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLK 452
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 50/108 (46%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
+ YNI+I C+ D + +M + +P +T N ++ LC G+ A +L E
Sbjct: 561 TTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFES 620
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
+ + D ITY I C+ D A FF M RGLQP + T+
Sbjct: 621 WVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTY 668
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 9/188 (4%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N+L+ C + L +M+ G P +TYN +L C+ G +A LL M
Sbjct: 212 FNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMK 271
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P TY + R+G A + M G +P L T+ G + +
Sbjct: 272 KEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVD 331
Query: 419 DAYKYVVLSADKYK-----SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
+A+K D+ + S + Y+ L K A N+L EM + G++ ++
Sbjct: 332 EAFKL----KDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVT 387
Query: 474 YRRVLKHL 481
+ ++K L
Sbjct: 388 HNIIVKGL 395
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 54/123 (43%)
Query: 288 VIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQD 347
+ +K +S YN LIK + D L E+ ++G P TYN ++ CK G
Sbjct: 517 IKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDL 576
Query: 348 ADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAF 407
A + +M+ + PD +T + C G+ + A F V++G + + T+
Sbjct: 577 EKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTL 636
Query: 408 IKG 410
I+
Sbjct: 637 IQA 639
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 37/83 (44%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P T+N ++ C G ADA L +M G PDA+TY + CR G A
Sbjct: 207 PNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTL 266
Query: 389 FNQMVKRGLQPRLATHAAFIKGY 411
+M K G+ P AT+ + Y
Sbjct: 267 LARMKKEGIVPTRATYNTLVSAY 289
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/187 (19%), Positives = 71/187 (37%), Gaps = 44/187 (23%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+ G CL + +++F +V K + V YN LI+ +C+ D
Sbjct: 602 MNGLCLYGRLEKAMKLFE--------SWVEKGKKVDVITYNTLIQALCKDNDVDTALRFF 653
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE------EMLGRNCHP--------- 364
+M G +P TYN +L L + G+ +A ++L ++ GR +P
Sbjct: 654 ADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAV 713
Query: 365 ---------------------DAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
D +Y +I C G+ A ++M+++G+ +T
Sbjct: 714 ETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNST 773
Query: 404 HAAFIKG 410
+ ++G
Sbjct: 774 YITLMEG 780
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 114/259 (44%), Gaps = 18/259 (6%)
Query: 233 FGFLPVLISSKALTK-----KGIWRVVEVLNQV----GGSCL--VSGVRALIEMFSVLGL 281
FG +P ++S L K K + +E+L+ + GG+C V +I+
Sbjct: 155 FGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQA 214
Query: 282 YEMAKYVI-----KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNY 336
+ A+ V+ K + V Y+ +I +C+ +L M G +P +TYN
Sbjct: 215 VDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNT 274
Query: 337 VLGVLCKNGQDADACE-LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR 395
++ LCK Q D E +L+ M+ + PD +TY I C+ D A M+ +
Sbjct: 275 IIDGLCK-AQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDK 333
Query: 396 GLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMA 455
++P + T+ I GY +++ + + + + YSLL KN A
Sbjct: 334 DVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEA 393
Query: 456 KNVLSEMMKNGLRPNVSVY 474
+ + M++ G++PNV++Y
Sbjct: 394 RKIFYCMIRKGIKPNVTIY 412
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 102/216 (47%), Gaps = 14/216 (6%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
G C V E+F +EM ++ V ++N ++ +C + L+
Sbjct: 523 GLCTVDRWEKAEELF-----FEMWDQGVRPN---VVFFNTIMCNLCNEGQVMVAQRLIDS 574
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M +VG P ++YN ++G C G+ +A +LL+ M+ PD I+Y+ + C+ G+
Sbjct: 575 MERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGR 634
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA---YKYVVLSADKYKSSSNML 438
D A+ F +M+++G+ P T++ ++G F R+ +A Y ++ S ++ +
Sbjct: 635 IDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYT--- 691
Query: 439 YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
Y+++ + K N A + + LRPN+ +
Sbjct: 692 YNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITF 727
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K + V YN +I +C+ +L M +P TYN ++ G+ +
Sbjct: 298 KGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKE 357
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
LEEM R PD +TY + + Y C+ GK A F M+++G++P + + +
Sbjct: 358 VVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLH 417
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
GY D + L S +N +++++ + K A ++ S M ++GL P
Sbjct: 418 GYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSP 477
Query: 470 NVSVY 474
+V Y
Sbjct: 478 DVVTY 482
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 83/206 (40%), Gaps = 1/206 (0%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K + V+ Y IL+ R DLL M G P +N VL K +
Sbjct: 403 KGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDE 462
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A + M PD +TY I I C++G+ D A FNQM+ G+ P + +
Sbjct: 463 AMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVY 522
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
G R+E A + D+ + + ++ + ++A+ ++ M + G+RP
Sbjct: 523 GLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRP 582
Query: 470 NVSVYRRVL-KHLHTSHQEHMAKCLS 494
NV Y ++ H + A+ L
Sbjct: 583 NVISYNTLIGGHCLAGRTDEAAQLLD 608
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 4/185 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N L+ +C ++ +L EM G P + +N ++ LC GQ A L++ M
Sbjct: 517 FNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSME 576
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ I+Y I C G+ D A + MV GL+P L ++ ++GY R +
Sbjct: 577 RVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRID 636
Query: 419 DAYKYVVLSADKYKSSSNMLYS--LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
+AY K + + YS L H + + AK + M+K+G + ++ Y
Sbjct: 637 NAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSE--AKELYLNMIKSGQQWDIYTYNI 694
Query: 477 VLKHL 481
+L L
Sbjct: 695 ILNGL 699
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 72/167 (43%), Gaps = 3/167 (1%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML---GRNCHPDAITYEIFIV 374
LL M + GC P ++ N +L LC + +A ELL M G NC P+ +TY I
Sbjct: 148 LLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIID 207
Query: 375 YSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSS 434
C+ D A M+ +G++ + T++ I G + A + DK
Sbjct: 208 GLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKP 267
Query: 435 SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ Y+ + K A+ VL M+ G++P+V Y ++ L
Sbjct: 268 DVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGL 314
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 98/230 (42%), Gaps = 4/230 (1%)
Query: 263 SCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
+CL+ G + E V+ + + + + V Y++L+ +C+ R + M
Sbjct: 343 NCLIHGYLSTGEWKEVV--RRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCM 400
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
+ G +P Y +L G AD +LL+ M+ P+ + I + +
Sbjct: 401 IRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMI 460
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY-KYVVLSADKYKSSSNMLYSL 441
D A + F++M + GL P + T+ I R +DA K+ + D +S + SL
Sbjct: 461 DEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSL 520
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
+ L + A+ + EM G+RPNV + ++ +L Q +A+
Sbjct: 521 VYGLCTVDRWE-KAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQ 569
>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
Length = 721
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 89/187 (47%), Gaps = 1/187 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN L+ C+ + K LL ++R+ G P LTYN ++ C+ G A+A L E
Sbjct: 378 VITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKE 437
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM+ + C PD TY I + S +V +A FF++M+ +GLQP + I
Sbjct: 438 EMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLS 497
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
A++ + K + Y+++ K N AK + ++M+ +GL+P+ Y
Sbjct: 498 STPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITY- 556
Query: 476 RVLKHLH 482
L H H
Sbjct: 557 TCLIHAH 563
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 87/190 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN++I +C+ + K + L +M G +P +TY ++ C+ G +A +LL M+
Sbjct: 521 YNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMV 580
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P +TY I + CR G A+ +F +M+ G++P T+ I + R
Sbjct: 581 SDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTP 640
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A+++ ++ + + Y+LL + + N A + EM +NG+ P+ + +
Sbjct: 641 LAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALF 700
Query: 479 KHLHTSHQEH 488
K H H
Sbjct: 701 KGFDEGHMYH 710
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 70/176 (39%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI + R + L +EM G P +TYN ++ L K Q A EM
Sbjct: 311 YNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMR 370
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD ITY + C+ G A + + GL P + T+ I GY
Sbjct: 371 AMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLA 430
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+A + ++ Y++L + K N MA+ EM+ GL+P+ Y
Sbjct: 431 EARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAY 486
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 65/158 (41%), Gaps = 4/158 (2%)
Query: 321 EMRQV----GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
++R+V G P T+TYN ++ LCK G DA L +M+ PD ITY I
Sbjct: 504 QLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAH 563
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
C G A N MV GLQP + T+ + AY + D +
Sbjct: 564 CERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNE 623
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ Y++L +A EM++ GL PN Y
Sbjct: 624 ITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTY 661
>gi|357441367|ref|XP_003590961.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480009|gb|AES61212.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 573
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 129/319 (40%), Gaps = 26/319 (8%)
Query: 197 ICSLVIDNCGRLDDYETMRQLLN-----DFNVYQVCLNEKAFGFLPVLISSKALTKKGIW 251
+ LV +CG E + + D N+Y +N SSK K
Sbjct: 256 LVELVCKHCGASRALEVLEDMAREGCCPDINMYNSLVN----------FSSKQGNYKDTA 305
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIK-KTERKVS----YYNILIKEM 306
V+ L G V LI S+ G ++ ++K E +S YNIL+ +
Sbjct: 306 LVISNLLSHGMQPNVVTYNILIHSLSLHGYSDVVDDILKIMNETSISPTLVTYNILLNSL 365
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
C+ L ++M C P +TYN +L LCK G ++ +LL + G NC P
Sbjct: 366 CKSGFLDRSISLYIKMVSENCSPDIVTYNTLLNALCKEGFIDESIQLLHSLSGTNCSPGL 425
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA---YKY 423
+TY I I R+ A + +MV++G+ P TH + G Y++E+A +K
Sbjct: 426 VTYNIVINGLARMRSIKSAKEMYGEMVEKGIDPDYITHRTLVWGLCQVYQFEEAVEIFKV 485
Query: 424 VVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHT 483
+ K K + L K ++ + A L M+K +P+ +Y +LK +
Sbjct: 486 MHRIGQKIKGYAYKCVILGLCEQKKLDSAIQA---LDLMVKAQCKPDGKIYYTLLKSVAN 542
Query: 484 SHQEHMAKCLSSRYSSLSL 502
+ A L R L +
Sbjct: 543 EGMVNEANDLHQRLIELKI 561
>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
Length = 703
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 98/228 (42%), Gaps = 5/228 (2%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKK-----TERKVSYYNILIKEM 306
RV+E++ G V AL++ F G A ++ K YN+LI+
Sbjct: 203 RVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQ 262
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
C + LL M G TYN ++ LCK+G+ AC L + + R P+A
Sbjct: 263 CIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNA 322
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
+T+ I C+ GK D+A+ F +MV G P T+++FI+ ++ ++
Sbjct: 323 VTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGE 382
Query: 427 SADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
K S + Y+++ K N + EM+ +G P+V Y
Sbjct: 383 MLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTY 430
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 81/192 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ++ C K ++L EM + G P +T V+ CK G+ +DA +LE M
Sbjct: 150 YAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMK 209
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R C P+ TY + C GK A N+M G+ P T+ I+G I E
Sbjct: 210 LRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIE 269
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A++ + L + Y+ L + K+ A ++ + G++PN + ++
Sbjct: 270 SAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLI 329
Query: 479 KHLHTSHQEHMA 490
L S + +A
Sbjct: 330 NGLCKSGKVDIA 341
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 72/173 (41%), Gaps = 4/173 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I+ +CRR D L M + G P T+N ++ C+ Q A +L ++M
Sbjct: 14 YNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMP 73
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R D ++Y I C G+ D A F +M QP + +AA +KG R E
Sbjct: 74 LRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMD----QPDMHMYAALVKGLCKAGRGE 129
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
+ + + S Y+ + A+ +L EM + GL P V
Sbjct: 130 EGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCV 182
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 75/183 (40%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N LI +C+ L +M GC P T TY+ + LCK + + EML
Sbjct: 325 FNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEML 384
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
++ P + Y I I + + + + +MV G P + T+ ++ Y I R
Sbjct: 385 QKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLN 444
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A ++ + + M Y+ L H A ++L +M PN Y +L
Sbjct: 445 EAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILL 504
Query: 479 KHL 481
+HL
Sbjct: 505 RHL 507
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 68/146 (46%), Gaps = 4/146 (2%)
Query: 333 TYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
TYN V+ LC+ A A L M+ PDA T+ IV CR + DVA + F++M
Sbjct: 13 TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72
Query: 393 VKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNP 452
RG + ++AA I+G+ R ++A V L + + +M +L+ L K
Sbjct: 73 PLRGFAQDVVSYAALIEGFCETGRIDEA---VELFGEMDQPDMHMYAALVKGLC-KAGRG 128
Query: 453 VMAKNVLSEMMKNGLRPNVSVYRRVL 478
+L M + G RP+ Y V+
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVV 154
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 94/225 (41%), Gaps = 19/225 (8%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y ++ C ++L+EM + G T+ YN ++ GQ A +L+
Sbjct: 427 VVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILK 486
Query: 356 EMLGRNCHPDAITYEIFIVYSCRV------------GKFDV-----AFNFFNQMVKRGLQ 398
+M P+ TY I + + R+ G + F F+ M K
Sbjct: 487 QMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFL 546
Query: 399 PRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNV 458
P T+++ ++G+ R E+A V L + S + +Y+ L + K+ + A +
Sbjct: 547 PNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVL 606
Query: 459 LSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAK--CLSSRYSSLS 501
+ M+++G P++ Y+ +L L Q AK ++SR+ S
Sbjct: 607 VCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYS 651
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 80/218 (36%), Gaps = 12/218 (5%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
G C + V ++F + L A+ V+ Y LI+ C +L E
Sbjct: 55 GYCRTNQVDVARDLFDKMPLRGFAQDVVS--------YAALIEGFCETGRIDEAVELFGE 106
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M Q P Y ++ LCK G+ + +L M P Y + + C K
Sbjct: 107 MDQ----PDMHMYAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERK 162
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
A +M ++GL P + T A I Y R DA + + L + + Y+
Sbjct: 163 AKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNA 222
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
L A +L++M G+ P+ Y +++
Sbjct: 223 LVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIR 260
>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Brachypodium distachyon]
Length = 571
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 7/172 (4%)
Query: 239 LISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSY 298
L +A++ KG+ + N CL++G + SV GL + + +K +
Sbjct: 383 LAVKEAMSGKGVRPNARIYN-----CLIAGFTRNGDWRSVSGLLDEMR--MKGVRADIVT 435
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+LI +C + + + LL EM VG EP+ LTYN ++ C+ G A E+ M
Sbjct: 436 YNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRME 495
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ +TY +FI CR+GK + N+M+++GL P T+ +G
Sbjct: 496 KGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEG 547
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 85/218 (38%), Gaps = 39/218 (17%)
Query: 258 NQVGGSCLVSGVRALIEMFSVLGLYE-MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPR 316
N V + LV G R L +M L + E M+ ++ R YN LI R D++
Sbjct: 362 NVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNAR---IYNCLIAGFTRNGDWRSVS 418
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
LL EMR G +TYN ++G LC G+ A +LL+EML P +TY I
Sbjct: 419 GLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGY 478
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
C G A+ +M K + + T+ FIK + E+
Sbjct: 479 CEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEET---------------- 522
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+L+EM++ GL PN Y
Sbjct: 523 -------------------NELLNEMLEKGLVPNGVTY 541
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 78/184 (42%), Gaps = 7/184 (3%)
Query: 296 VSYYNILIKEMCRRCDFKGPR-----DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
V YN +I C+R + R LL EM + G P +T+N ++ CK+ A A
Sbjct: 220 VVTYNTIIDGYCKRG--RAGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAA 277
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ EEM + +TY + C GK + ++M GL P LAT + + G
Sbjct: 278 VRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNG 337
Query: 411 YFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
+ DA ++ K + + Y++L + + + A V M G+RPN
Sbjct: 338 FCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPN 397
Query: 471 VSVY 474
+Y
Sbjct: 398 ARIY 401
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 84/187 (44%), Gaps = 19/187 (10%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA-----DACEL 353
+NI+I +C+ + D+ ++R G P +TYN ++ CK G+ DA L
Sbjct: 188 FNIVISGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDA--L 245
Query: 354 LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
L+EM+ P+ +T+ + + C+ A F +M ++G+ + T++A + G
Sbjct: 246 LKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCS 305
Query: 414 FYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHD------KNNNPVMAKNVLSEMMKNGL 467
+ E+ K V D+ K L LA+L+ K A+ + M + +
Sbjct: 306 EGKVEEGVKLV----DEMKDLG--LVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNV 359
Query: 468 RPNVSVY 474
+PNV Y
Sbjct: 360 KPNVVTY 366
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 84/194 (43%), Gaps = 3/194 (1%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L EM + I E +N+L+ C+ + + EM+Q G +TY+ ++
Sbjct: 246 LKEMVEAGISPNE---VTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWG 302
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
LC G+ + +L++EM P+ T + C+ G A + + M ++ ++P
Sbjct: 303 LCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPN 362
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
+ T+ + GY + +DA + K + +Y+ L + +N + +L
Sbjct: 363 VVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLD 422
Query: 461 EMMKNGLRPNVSVY 474
EM G+R ++ Y
Sbjct: 423 EMRMKGVRADIVTY 436
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 61/153 (39%), Gaps = 3/153 (1%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN- 387
P T+N V+ LCK GQ A ++ +++ P +TY I C+ G+ ++
Sbjct: 183 PDLFTFNIVISGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHV 242
Query: 388 --FFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
+MV+ G+ P T + GY A + + ++S + YS L
Sbjct: 243 DALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWG 302
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
++ EM GL PN++ VL
Sbjct: 303 LCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVL 335
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 61/149 (40%), Gaps = 3/149 (2%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P + N +L L + A + L R PD T+ I I C+ G+ A +
Sbjct: 148 PSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDV 207
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYK---SSSNMLYSLLASL 445
+ GL P + T+ I GY R Y L + + S + + +++L +
Sbjct: 208 AKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNG 267
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ K++N A V EM + G+ +V Y
Sbjct: 268 YCKDSNTAAAVRVFEEMKQQGIAASVVTY 296
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 9/169 (5%)
Query: 243 KALTKKG-IWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNI 301
K +T +G + VV + + G C + A + +F + +A + Y+
Sbjct: 163 KTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEV--------VYSA 214
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
LI +C+ ++L +M++ C P T+TYN ++ LCK+G A A +EML
Sbjct: 215 LIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAG 274
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
C PD TY I I C+ G D A F+ M P + T+ I G
Sbjct: 275 CKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISG 323
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 85/226 (37%), Gaps = 35/226 (15%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
M K ++ YN L+ +C+ + DLL ++ GC P +TY ++ L K
Sbjct: 57 MEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGK 116
Query: 344 NGQDADACELLEEMLGRN-----------------------------------CHPDAIT 368
+ +A +L +EM R C PD +T
Sbjct: 117 KKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVT 176
Query: 369 YEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSA 428
I C+ G+ A F M RGL P ++A I G + + A + +
Sbjct: 177 LSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMK 236
Query: 429 DKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + + Y++L K+ + A+ EM++ G +P+V Y
Sbjct: 237 KAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTY 282
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 76/184 (41%), Gaps = 2/184 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
++ILI + + L E GC TY ++ L KN + +A L+E++
Sbjct: 2 FSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKIT 61
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C P TY + C++G+ + A + ++V G P + T+ + I G R
Sbjct: 62 ANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSF 121
Query: 419 DAYKYVVLSADKYKSSSNMLYS-LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+AYK A + + + Y+ L+ L P A +V M G P+V +
Sbjct: 122 EAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIP-QASSVYKTMTSQGCVPDVVTLSTM 180
Query: 478 LKHL 481
+ L
Sbjct: 181 IDGL 184
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y LI +C+R M++ GC P + Y+ ++ LCK+G+ C L +
Sbjct: 314 VVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFD 373
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
EM R+ ++ T I + C+ + D A + FN + K G+
Sbjct: 374 EM-ERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM 414
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 56/149 (37%)
Query: 333 TYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
T++ ++ L K G A L +E C D TY + + + K A ++
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 393 VKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNP 452
G P +AT+ A + G R E+A + D + + Y+ L K
Sbjct: 61 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120
Query: 453 VMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A + EM GL + Y +++ L
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGL 149
>gi|224133034|ref|XP_002327945.1| predicted protein [Populus trichocarpa]
gi|222837354|gb|EEE75733.1| predicted protein [Populus trichocarpa]
Length = 1450
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 107/224 (47%), Gaps = 11/224 (4%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERKVSY-----YNILIKEMCRRCDFKGPRDLLVEMRQV 325
A+I ++ GL A+ + E + + YN + R + + +D+ EM ++
Sbjct: 368 AMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSFLYAFAREGNVEKVKDICEEMVKI 427
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G +TYN ++ + K GQ+ A +L +M +PD ITY + I + K + A
Sbjct: 428 GFGKDEMTYNTMIHMYGKQGQNDLALQLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEA 487
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYR---YEDAYKYVVLSADKYKSSSNMLYSLL 442
++M+ G++P L T++A I GY + E+ + ++ S + + YS++
Sbjct: 488 AGMMSEMLNTGVKPTLRTYSALICGYAKAGKPVEAEETFDCMLRSGTR---PDQLAYSVM 544
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
+H + N P A EM+ +G+ P S+Y +L+ L +++
Sbjct: 545 LDIHLRFNEPKRAMTFYKEMIHDGIMPEHSLYELMLRTLGNANK 588
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 55/121 (45%), Gaps = 2/121 (1%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD--A 350
E V YN ++ R F ++L MR+ GCEP +++N ++ K G+ A
Sbjct: 253 ENTVKVYNAMMGVYARSGKFNKVQELFDLMRERGCEPDLVSFNTLINARLKAGEMTPNLA 312
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
ELL E+ PD ITY I R + A N F+ MV +P L T+ A I
Sbjct: 313 IELLTEVRRSGLRPDIITYNTLISACSRASNLEEAVNVFDDMVAHHCEPDLWTYNAMISV 372
Query: 411 Y 411
Y
Sbjct: 373 Y 373
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 80/182 (43%), Gaps = 7/182 (3%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
+LL E+R+ G P +TYN ++ + +A + ++M+ +C PD TY I
Sbjct: 314 ELLTEVRRSGLRPDIITYNTLISACSRASNLEEAVNVFDDMVAHHCEPDLWTYNAMISVY 373
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYK---S 433
R G A FN + RG P ++ +F+ + F R + K + + K
Sbjct: 374 GRCGLSGKAEQLFNDLESRGFFPDAVSYNSFL---YAFAREGNVEKVKDICEEMVKIGFG 430
Query: 434 SSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ-EHMAKC 492
M Y+ + ++ K +A + +M +G P+V Y ++ L +++ E A
Sbjct: 431 KDEMTYNTMIHMYGKQGQNDLALQLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEAAGM 490
Query: 493 LS 494
+S
Sbjct: 491 MS 492
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 77/179 (43%), Gaps = 6/179 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI R + + ++ +M CEP TYN ++ V + G A +L ++
Sbjct: 331 YNTLISACSRASNLEEAVNVFDDMVAHHCEPDLWTYNAMISVYGRCGLSGKAEQLFNDLE 390
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R PDA++Y F+ R G + + +MVK G T+ I Y + +
Sbjct: 391 SRGFFPDAVSYNSFLYAFAREGNVEKVKDICEEMVKIGFGKDEMTYNTMIHMYGKQGQND 450
Query: 419 DAYKYVVLSADKYKSSSN---MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
A + L D S N + Y++L K N A ++SEM+ G++P + Y
Sbjct: 451 LALQ---LYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEAAGMMSEMLNTGVKPTLRTY 506
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 110/269 (40%), Gaps = 13/269 (4%)
Query: 219 NDFNVYQVCLNEKAFGFLPVL----ISSKALTKKGIWRVVEVL----NQVGGSCLVSGVR 270
N F V ++ KA G+ P + + ++ L + R VE + + G +S
Sbjct: 900 NIFEVKKIYHGMKAAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEMEEAGFKPDLSIWN 959
Query: 271 ALIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
++++M+ + + + ++ E YNILI CR K L+ EMR V
Sbjct: 960 SVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKEGLVLMDEMRTV 1019
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G EP TY ++ K A EL EE+ C D Y I + G A
Sbjct: 1020 GLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSTGCKLDRSFYHIMMKIYRNSGSHSKA 1079
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
F+ M G++P +AT + Y + ++A K + + + S + YS +
Sbjct: 1080 QRLFSMMKDEGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETDANLSTLPYSSVIDA 1139
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ +N + L ++ + GL P+ ++
Sbjct: 1140 YVRNGDYNAGIQKLKQVKEEGLEPDHRIW 1168
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/208 (18%), Positives = 84/208 (40%), Gaps = 6/208 (2%)
Query: 208 LDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVS 267
+DD+ Q+ + +E + L V+ K+G+ +++ + VG +
Sbjct: 968 IDDFRKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKEGL-VLMDEMRTVGLEPKLD 1026
Query: 268 GVRALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEM 322
++L+ F L E A+ + ++ + S+Y+I++K + L M
Sbjct: 1027 TYKSLVASFGKQQLVEQAEELFEELQSTGCKLDRSFYHIMMKIYRNSGSHSKAQRLFSMM 1086
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
+ G EP T + ++ +GQ +A ++L + + + + Y I R G +
Sbjct: 1087 KDEGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETDANLSTLPYSSVIDAYVRNGDY 1146
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ Q+ + GL+P FI+
Sbjct: 1147 NAGIQKLKQVKEEGLEPDHRIWTCFIRA 1174
Score = 38.5 bits (88), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 53/281 (18%), Positives = 112/281 (39%), Gaps = 25/281 (8%)
Query: 208 LDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVE-VLNQVGGSCLV 266
+D ET +LN+ +VY + +A+G L +W+ E V + SC+
Sbjct: 767 IDLTETDGTVLNNISVYVDVI--EAYGRLK------------LWQKAESVAGNMRQSCIT 812
Query: 267 SGVR---ALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDL 318
+ ALIE ++ G YE A+ V + V N L++ + + +
Sbjct: 813 VNRKVWNALIEAYAASGCYERARAVFNTMMKDGPSPTVDSINGLLQALIVDGRLEELYVV 872
Query: 319 LVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCR 378
+ E++ +G + + +L + G + ++ M P Y + CR
Sbjct: 873 VQELQDIGFKISKSSILLMLDAFARAGNIFEVKKIYHGMKAAGYFPSMHLYRVMAQLLCR 932
Query: 379 VGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSNM 437
+ ++M + G +P L+ + +K Y + + Y + D + +
Sbjct: 933 GKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDT 992
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
Y++L ++ +++ P ++ EM GL P + Y+ ++
Sbjct: 993 -YNILIVMYCRDHRPKEGLVLMDEMRTVGLEPKLDTYKSLV 1032
>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
Length = 1603
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 172/403 (42%), Gaps = 33/403 (8%)
Query: 102 CRSQISKLGLLTSRCISSFAMVNGPYATP--KQVSEIIELLRSGDSETE-----SKLLSM 154
C+++ + L ++ C+S+F + P K + ++ +LR + ++L +
Sbjct: 1054 CKARDATLDTCSTLCLSAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLEL 1113
Query: 155 SVSLS----NASVIEILRVLNSEKVSALCFLKYMREIMPEFYKNSDICSLVIDNCGRLDD 210
+ S N + L+ +KV+ L LK M N ++VI R D
Sbjct: 1114 GIEPSIVTYNTLLDSFLKEGRKDKVAML--LKEMETRGSGCLPNDVTYNVVITGLTRKGD 1171
Query: 211 YETMRQLLNDFNVYQVCLNEKA--FGFLPVLIS--SKALTKKGIWRVVEVLNQVGGSCLV 266
E +L+ L++KA F + P++ ++ KK +E+ N+ G V
Sbjct: 1172 LEEAAELVEGMR-----LSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENE-GIMPTV 1225
Query: 267 SGVRALIEMFSVLGLYEMAKYVIKKTERK-------VSYYNILIKEMCRRCDFKGPRDLL 319
A+I GL E A+ +K E + V YN L+ C+ + K L
Sbjct: 1226 VTYNAMIHGLLQSGLVEAAQ--VKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLF 1283
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
++R+ G P LTYN ++ C+ G +A L EEM + C P+ TY I + S V
Sbjct: 1284 GDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNV 1343
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
+A FF++M+ +GLQP + I I A++ + + SS + Y
Sbjct: 1344 RSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTY 1403
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLH 482
++L K N AK + +M+ NGL+P+ Y L H H
Sbjct: 1404 NILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITY-TCLIHAH 1445
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 90/188 (47%), Gaps = 4/188 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNILI +C+ + K ++L ++M G +P +TY ++ C+ G +A ++ M+
Sbjct: 1403 YNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMI 1462
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P A+T+ + I CR G A+ +F +M++ G++P T+ I R +
Sbjct: 1463 SDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQ 1522
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + ++ ++ Y+LL + K N A EM +NG+ P+ ++ +L
Sbjct: 1523 LASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALL 1582
Query: 479 K----HLH 482
K H+H
Sbjct: 1583 KGFDGHVH 1590
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 66/158 (41%), Gaps = 4/158 (2%)
Query: 321 EMRQV----GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
E+R+V G T+TYN ++ LCK G DA EL +M+ PD ITY I
Sbjct: 1386 ELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAH 1445
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
C G A FN M+ GL P T I Y AY + ++ +
Sbjct: 1446 CERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNE 1505
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ Y++L + +A + EM++ GL N Y
Sbjct: 1506 ITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTY 1543
>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 580
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 98/216 (45%), Gaps = 16/216 (7%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMR------QVGCEPITLTYNYVLGVLCKNGQDAD 349
V Y LIK +C + L EM ++ C+P +TYN ++ LCK G++ +
Sbjct: 174 VVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDE 233
Query: 350 ACELLEEM----------LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
A +L EEM L + PD +T+ + I C+ GK A M++ G+ P
Sbjct: 234 AKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVP 293
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
L T+ + I+G+ + A + V K + Y++L + + K A +
Sbjct: 294 DLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLY 353
Query: 460 SEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSS 495
+EM+ G RPNV Y +LK + + + AK L S
Sbjct: 354 NEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFS 389
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 81/188 (43%), Gaps = 11/188 (5%)
Query: 299 YNILIKEMCRR-CDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
Y I + +C+ C F+ + L E++ + N ++ LCK G+ A EL E++
Sbjct: 403 YGIFLDGLCKNDCLFEAMK-LFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKL 461
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
P+ +TY I I CR G+ D A +M G P + T+ ++G++ +
Sbjct: 462 SNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKL 521
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
E+ + + A K S + S++ + K+ ++L P + + V
Sbjct: 522 EEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLL---------PRFPIQKGV 572
Query: 478 LKHLHTSH 485
KHL +H
Sbjct: 573 DKHLLMTH 580
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/305 (20%), Positives = 126/305 (41%), Gaps = 20/305 (6%)
Query: 199 SLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEK-AFGFLPVLISSKALT----KKGIWRV 253
++++D ++ + +QL + + NE G P +++ L K+G +V
Sbjct: 219 NIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEG--KV 276
Query: 254 VEVLNQVGGSCLVSGV-------RALIEMFSVLGLYEMAKYVI-----KKTERKVSYYNI 301
+E ++ G + SG+ +LIE F ++G A+ + K E V YN+
Sbjct: 277 IEA-KKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNV 335
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
LI + + L EM VG P +TY+ +L + G+ DA +L M
Sbjct: 336 LINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHG 395
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
++ TY IF+ C+ A F ++ + + I G + E A+
Sbjct: 396 IAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAW 455
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ +++ + + Y+++ + A ++ +M NG P++ Y +++
Sbjct: 456 ELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGF 515
Query: 482 HTSHQ 486
+ S++
Sbjct: 516 YESNK 520
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 48/109 (44%)
Query: 295 KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
++ N LI +C+ + +L ++ G EP +TY ++ C+ GQ A L+
Sbjct: 434 EIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLI 493
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
++M C PD ITY + K + ++M ++ + P T
Sbjct: 494 QKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAIT 542
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 2/111 (1%)
Query: 263 SCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
+CL+ G+ ++ + L+E K + E V Y I+I CR L+ +M
Sbjct: 439 NCLIDGLCKAGKLETAWELFE--KLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKM 496
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFI 373
GC P +TYN ++ ++ + + +LL M ++ PDAIT I +
Sbjct: 497 EANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVV 547
Score = 38.1 bits (87), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 46/115 (40%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+S +N L+ + + + L +MR G T N +L LC + +
Sbjct: 69 LSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFA 128
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+L R P+ +TY I C + A F +M K G P + T+ IKG
Sbjct: 129 GILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKG 183
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 2/210 (0%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
+ K + K + YN LI +C C++K LL EM P + ++ V+ LCK
Sbjct: 661 LCKMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCK 720
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
G A A ++++ M+ R PD +TY + C + D A F+ MV +G P + +
Sbjct: 721 EGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRS 780
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
+ I GY R + A + + + + + Y+ L A + EM+
Sbjct: 781 YNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMV 840
Query: 464 KNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
+G P++ YR +L +L +H H+A+ +
Sbjct: 841 ASGQIPDLVTYRILLDYLCKNH--HLAEAM 868
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 105/234 (44%), Gaps = 22/234 (9%)
Query: 258 NQVGGSCLVSGV---RALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKG 314
N V L++G+ R + E F++ ++ + K + YN LI +C+ C++K
Sbjct: 149 NVVTYGTLINGLCKDRQVTEAFNIF-----SEMITKGISPNIVTYNSLIHGLCKLCEWKH 203
Query: 315 PRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIV 374
L+ EM P T N V+ LCK G A+A ++++ M+ R P+ +TY +
Sbjct: 204 VTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMD 263
Query: 375 YSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA-YKYVVLSADKYKS 433
C + DVA F+ MV + + ++ I GY + A Y + +S +
Sbjct: 264 GHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTP 323
Query: 434 SS----NMLYSL--LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
++ +++ L + L D A ++ EM+ G P++ YR + +L
Sbjct: 324 NTVTYNTLIHGLCHVGRLQD-------AISLFHEMVARGQIPDLVTYRTLSDYL 370
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 103/263 (39%), Gaps = 8/263 (3%)
Query: 247 KKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEM 306
K + V+ + G C + V + +F + E+ + YN LI +
Sbjct: 284 KDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVT--------YNTLIHGL 335
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
C + L EM G P +TY + LCKN A LL+ + G N PD
Sbjct: 336 CHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDI 395
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
Y + CR G+ + A + F+ + +GLQP + T+ I G +A K
Sbjct: 396 QIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSE 455
Query: 427 SADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
S ++ Y+L+ +NN + +L EM+ G +VS ++ L
Sbjct: 456 MNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGL 515
Query: 487 EHMAKCLSSRYSSLSLGSSVEAR 509
+ K + + SS S S + R
Sbjct: 516 DQSVKQILCKPSSSSRPSGTQMR 538
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 68/146 (46%), Gaps = 2/146 (1%)
Query: 265 LVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQ 324
L++G + M +GL E + ++ YN LI +C + L EM
Sbjct: 784 LINGYCQIQRMDKAMGLLE--QMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVA 841
Query: 325 VGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
G P +TY +L LCKN A+A LL+ + G N D + Y I I CR G+ +
Sbjct: 842 SGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEA 901
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKG 410
A + F+ + +GLQP + T+ I G
Sbjct: 902 ARDLFSNLSSKGLQPDVRTYNIMIHG 927
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 80/180 (44%), Gaps = 4/180 (2%)
Query: 301 ILIKEMCR--RCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
I+I +C R DF L ++ ++G +P T+ ++ LC G+ +A L ++M+
Sbjct: 85 IVINSLCHLNRVDFA--FSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMI 142
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
G P+ +TY I C+ + AFN F++M+ +G+ P + T+ + I G ++
Sbjct: 143 GEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWK 202
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ D + + K A +V+ M+ G+ PNV Y ++
Sbjct: 203 HVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALM 262
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 82/218 (37%), Gaps = 8/218 (3%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
G CL + V +++F + V K V YN LI C+ L E
Sbjct: 264 GHCLRNEVDVAVKVFDTM--------VHKDCVANVISYNTLINGYCKIQSVDKAMYLFEE 315
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M + P T+TYN ++ LC G+ DA L EM+ R PD +TY Y C+
Sbjct: 316 MSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRH 375
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
D A + P + + + G EDA + K + Y++
Sbjct: 376 LDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNI 435
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
+ K A + SEM KNG PN Y + +
Sbjct: 436 MIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITR 473
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 100/234 (42%), Gaps = 1/234 (0%)
Query: 249 GIWRVVEVLNQVGGSCLVSGVRAL-IEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMC 307
+ +++++ +Q + + +R L +E L+ K + + + V Y LI +C
Sbjct: 102 ALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLC 161
Query: 308 RRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAI 367
+ ++ EM G P +TYN ++ LCK + L+ EM+ PD
Sbjct: 162 KDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVF 221
Query: 368 TYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLS 427
T + C+ G A + + M+ RG++P + T+ A + G+ + + A K
Sbjct: 222 TLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTM 281
Query: 428 ADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K ++ + Y+ L + + K + A + EM + L PN Y ++ L
Sbjct: 282 VHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGL 335
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 103/242 (42%), Gaps = 13/242 (5%)
Query: 251 WR-VVEVLNQVGGSCLVSGVRALIEMFSVL---GLYEMAKYVI-----KKTERKVSYYNI 301
W+ V +LN++ S ++ V + L G+ +A V+ + E V Y
Sbjct: 689 WKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTA 748
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
L+ C R + + M GC P +YN ++ C+ + A LLE+M +
Sbjct: 749 LMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQG 808
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
D +TY I C VG+ A F++MV G P L T+ + ++ + A
Sbjct: 809 LIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLD--YLCKNHHLAE 866
Query: 422 KYVVLSADKYKS--SSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
V+L A + + + ++Y++ + A+++ S + GL+P+V Y ++
Sbjct: 867 AMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIH 926
Query: 480 HL 481
L
Sbjct: 927 GL 928
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 87/212 (41%), Gaps = 23/212 (10%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK---NGQDADA------ 350
NILI C +L ++ ++G +P +TY ++ LCK G D
Sbjct: 620 NILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKMITKGISPDIFTYNSL 679
Query: 351 -------CE------LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
CE LL EM+ P+ + + + C+ G +A + + M+KRG+
Sbjct: 680 IHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGV 739
Query: 398 QPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKN 457
+P + T+ A + G+ + ++A K K + Y++L + + + A
Sbjct: 740 EPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMG 799
Query: 458 VLSEMMKNGLRPNVSVYRRVLKHL-HTSHQEH 488
+L +M GL + Y ++ L H +H
Sbjct: 800 LLEQMSLQGLIADTVTYNTLIHGLCHVGRLQH 831
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 64/153 (41%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P T+ +N +L + K + L +M PD T I I C + + D AF+
Sbjct: 43 PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSA 102
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
+++K G QP T I+G + + +A + + + Y L + K
Sbjct: 103 LAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK 162
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ A N+ SEM+ G+ PN+ Y ++ L
Sbjct: 163 DRQVTEAFNIFSEMITKGISPNIVTYNSLIHGL 195
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
+ + YNI I MCR + + RDL + G +P TYN ++ LCK G +A +
Sbjct: 880 DADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANK 939
Query: 353 LLEEM 357
L +M
Sbjct: 940 LFRKM 944
Score = 42.0 bits (97), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 67/169 (39%), Gaps = 15/169 (8%)
Query: 225 QVCLNEKAFGFLPVLISSKALTKKG-IWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYE 283
Q+ +KA G L + ++ +G I V + G C V ++ I +F +E
Sbjct: 790 QIQRMDKAMGLL------EQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALF-----HE 838
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
M V + Y IL+ +C+ LL + + L YN + +C+
Sbjct: 839 M---VASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCR 895
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
G+ A +L + + PD TY I I C+ G D A F +M
Sbjct: 896 AGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKM 944
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 68/172 (39%), Gaps = 22/172 (12%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P T+ + +L + K + L +M PD T I I C + + AF+
Sbjct: 579 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 638
Query: 389 FNQMVKRGLQPRLATHAAFIKGY------------FIFYRYEDA------YKYVVLSADK 430
+++K G QP + T+ + G F + A +K+V ++
Sbjct: 639 LAKLLKLGFQPDVVTYGTLMNGLCKMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNE 698
Query: 431 YKSSSNM----LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+S M ++S + K +A +V+ M+K G+ P+V Y ++
Sbjct: 699 MVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALM 750
>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
Length = 653
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 91/213 (42%), Gaps = 38/213 (17%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN+L++ +C+ R +L EM GC P +TY ++ LC G+ +A E+L
Sbjct: 169 VFTYNLLVRALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVLS 228
Query: 356 ------------------------------EMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
+M+GR P+ ITY + C+ G+ +A
Sbjct: 229 AAPPVAASYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMA 288
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSS---NMLYSL 441
+MV G P +AT A + G F R DA + + A+ + S+ N+L
Sbjct: 289 CAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRG 348
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
L S+ D A +VL++M ++G PN Y
Sbjct: 349 LCSVGDLKG----ASSVLNDMEQHGCFPNARTY 377
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 11/200 (5%)
Query: 299 YNILIKEMCRRCDFKGPRDLLV-EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
YN LI + R + G L+ MR+ G +P TYN ++ LC+N + A ++L+EM
Sbjct: 137 YNHLIDALLRE-NMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEM 195
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
+ C PD +TY + C +G+ D A + P A++ A I +R
Sbjct: 196 ATKGCPPDDVTYGTIVSALCTLGRVDEATEVLSAA-----PPVAASYNAVILALCREFRM 250
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
++ + V + + + Y+ + + K MA +L+ M+ G PNV+ + +
Sbjct: 251 QEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTAL 310
Query: 478 LKHLHTSHQEH----MAKCL 493
+ L + H M KC+
Sbjct: 311 VGGLFNDGRVHDALDMWKCM 330
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 87/204 (42%), Gaps = 2/204 (0%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPIT 331
++ LG + A V+ + YN +I +CR + ++ +M G +P
Sbjct: 210 IVSALCTLGRVDEATEVLSAAPPVAASYNAVILALCREFRMQEVFAVVGDMVGRGLQPNV 269
Query: 332 LTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQ 391
+TY ++ CK G+ AC +L M+ C P+ T+ + G+ A + +
Sbjct: 270 ITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKC 329
Query: 392 MVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM-LYSLLASLHDKNN 450
MV G P ++ I+G + A V+ +++ N YS L K
Sbjct: 330 MVAEGWAPSTVSYNVLIRGLCSVGDLKGA-SSVLNDMEQHGCFPNARTYSTLIDGFSKAG 388
Query: 451 NPVMAKNVLSEMMKNGLRPNVSVY 474
+ A ++ ++M ++G +PNV VY
Sbjct: 389 DLDGAISIWNDMTRSGCKPNVVVY 412
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 99/240 (41%), Gaps = 5/240 (2%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTERKVSY-----YNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI +G + A V+ E+ + Y+ LI + D G + +M + G
Sbjct: 345 LIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSG 404
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
C+P + Y ++GV CK A L+++ML NC P+ +T+ I C + A
Sbjct: 405 CKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRAL 464
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
F++M + G P T+ + G F DA + V+ + S + Y+ + S
Sbjct: 465 GVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGL 524
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
+ A + M+ G++P+ + ++ + MA + + ++ G ++
Sbjct: 525 CQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNI 584
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 91/211 (43%), Gaps = 11/211 (5%)
Query: 274 EMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLT 333
E+F+V+G V + + V Y ++ C+ + + +L M GC P T
Sbjct: 252 EVFAVVG-----DMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVAT 306
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
+ ++G L +G+ DA ++ + M+ P ++Y + I C VG A + N M
Sbjct: 307 FTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDME 366
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN---MLYSLLASLHDKNN 450
+ G P T++ I G F + D + + D +S ++Y+ + + K
Sbjct: 367 QHGCFPNARTYSTLIDG---FSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKL 423
Query: 451 NPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A++++ +M+ PN + +++ L
Sbjct: 424 MFNQAESLIDKMLVENCPPNTVTFNTLIRSL 454
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 79/215 (36%), Gaps = 5/215 (2%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI+ FS G + A + R V Y ++ C++ F L+ +M
Sbjct: 380 LIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVEN 439
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
C P T+T+N ++ LC + A + EM C P+ TY + R G A
Sbjct: 440 CPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDAL 499
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
+M G++ L T+ + G +A +V + ++ + +
Sbjct: 500 QMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAY 559
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K MA +L M N+ VY ++ L
Sbjct: 560 CKEGEVRMAAWILGAMNVVNCGRNILVYTILMAEL 594
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 50/120 (41%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E + YN ++ +C+ + + M G +P T+ ++ CK G+ A
Sbjct: 511 ELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAW 570
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+L M NC + + Y I + C K + A + +M+ G+ P T ++G F
Sbjct: 571 ILGAMNVVNCGRNILVYTILMAELCNQDKLEDAMVYLLKMLYEGIYPNTVTWNVLVRGVF 630
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ +I +C+ ++L M + G P TYN ++ C +GQ +A L+
Sbjct: 234 VVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLK 293
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M PD +TY + Y C+ G+ A F+ M KRGL+P + T+ ++GY
Sbjct: 294 KMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKG 353
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ + + L ++ ++S+L + K A V S+M + GL P+ Y
Sbjct: 354 ALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYG 413
Query: 476 RVLKHL 481
V+ L
Sbjct: 414 TVIGIL 419
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 78/187 (41%), Gaps = 2/187 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVG--CEPITLTYNYVLGVLCKNGQDADACELLEE 356
YNIL+K +C + +LL M G C P ++Y V+ K G A E
Sbjct: 165 YNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHE 224
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
ML R P+ +TY I C+ D A MVK G+ P T+ + + GY +
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
++A ++ + Y+ L KN A+ + M K GL+P ++ Y
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344
Query: 477 VLKHLHT 483
+L+ T
Sbjct: 345 LLQGYAT 351
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 100/223 (44%), Gaps = 10/223 (4%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
GSC +G L F+ LG +++ + ++K +C D+++
Sbjct: 99 GSCCCAGRLDL--GFAALGNVIKKGFIVDAIA-----FTPMLKGLCADKRTSDAMDIVLR 151
Query: 322 -MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML--GRNCHPDAITYEIFIVYSCR 378
M Q+GC P +YN +L LC + + +A ELL+ M G +C PD ++Y I +
Sbjct: 152 RMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFK 211
Query: 379 VGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML 438
G D A+ +++M+ RG+ P + T+++ I + A + + +
Sbjct: 212 EGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRT 271
Query: 439 YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y+ + + + P A L +M +G+ P+V Y ++ +L
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYL 314
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 106/256 (41%), Gaps = 40/256 (15%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPI 330
AL+EM +L L M + I ++ILI ++ + +MRQ G P
Sbjct: 354 ALVEMHGLLDL--MVRNGIHPNHY---VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPD 408
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA----- 385
T+TY V+G+LCK+G+ DA E+M+ P I Y I C K+D A
Sbjct: 409 TVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELIL 468
Query: 386 -------------FN-----------------FFNQMVKRGLQPRLATHAAFIKGYFIFY 415
FN F+ MV+ G++P + T++ I GY +
Sbjct: 469 EMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAG 528
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ ++A K + + Y+ L + + K + A + EM +G+ P++ Y
Sbjct: 529 KMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYN 588
Query: 476 RVLKHLHTSHQEHMAK 491
+L+ L + + AK
Sbjct: 589 IILQGLFQTRRTAAAK 604
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 79/183 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C + ++L++EM G T+ +N ++ CK G+ ++ +L + M+
Sbjct: 447 YNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMV 506
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD ITY I C GK D A MV G++P T+ I GY R E
Sbjct: 507 RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRME 566
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA S + Y+++ + AK + + ++G + +S Y +L
Sbjct: 567 DALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIIL 626
Query: 479 KHL 481
L
Sbjct: 627 HGL 629
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 80/178 (44%), Gaps = 6/178 (3%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V YN L+ +C+ R + M + G +P TY +L G +
Sbjct: 301 EPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHG 360
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
LL+ M+ HP+ + I I + GK D A F++M ++GL P T+ I
Sbjct: 361 LLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC 420
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLY-SLLASL--HDKNNNPVMAKNVLSEMMKNGL 467
R EDA +Y D+ S N++Y SL+ SL DK + AK ++ EM+ G+
Sbjct: 421 KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDK---AKELILEMLDRGI 475
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/184 (19%), Positives = 82/184 (44%)
Query: 295 KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
+++ Y L++ + LL M + G P ++ ++ K G+ A +
Sbjct: 338 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVF 397
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
+M + +PD +TY I C+ G+ + A +F QM+ L P + + I IF
Sbjct: 398 SKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIF 457
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+++ A + ++ D+ + ++ + H K + ++ + M++ G++P++ Y
Sbjct: 458 DKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITY 517
Query: 475 RRVL 478
++
Sbjct: 518 STLI 521
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNI+++ + + ++L V + + G + TYN +L LCKN +A + + +
Sbjct: 587 YNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 646
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
+ + T+ I I +VG+ D A + F + GL P + T++
Sbjct: 647 LTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYS 693
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 68/184 (36%), Gaps = 2/184 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI C+ + L EM G P +TYN +L L + + A A EL +
Sbjct: 552 YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT 611
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ TY I + C+ D A F + LQ T I R +
Sbjct: 612 ESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRND 671
Query: 419 DAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+A + LSA+ YSL+A + ++ M +NG N + +
Sbjct: 672 EAKDLFAALSANGLVPDVRT-YSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSI 730
Query: 478 LKHL 481
++ L
Sbjct: 731 VRKL 734
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ +I +C+ ++L M + G P TYN ++ C +GQ +A L+
Sbjct: 234 VVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLK 293
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M PD +TY + Y C+ G+ A F+ M KRGL+P + T+ ++GY
Sbjct: 294 KMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKG 353
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ + + L ++ ++S+L + K A V S+M + GL P+ Y
Sbjct: 354 ALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYG 413
Query: 476 RVLKHL 481
V+ L
Sbjct: 414 TVIGIL 419
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 101/224 (45%), Gaps = 12/224 (5%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTER-KVSYYNILIKEMCRRCDFKGPRDLLV 320
GSC +G L F+ LG VIKK R + L+K +C D+++
Sbjct: 99 GSCCCAGRLDL--GFAALG------NVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVL 150
Query: 321 E-MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML--GRNCHPDAITYEIFIVYSC 377
M Q+GC P +YN +L LC + +A ELL+ M G +C PD ++Y I
Sbjct: 151 RRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFF 210
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ G D A+ +++M+ RG+ P + T+++ I + A + + +
Sbjct: 211 KEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCR 270
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y+ + + + P A L +M +G+ P+V Y ++ +L
Sbjct: 271 TYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYL 314
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 78/187 (41%), Gaps = 2/187 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVG--CEPITLTYNYVLGVLCKNGQDADACELLEE 356
YNIL+K +C + +LL M G C P ++Y V+ K G A E
Sbjct: 165 YNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHE 224
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
ML R P+ +TY I C+ D A MVK G+ P T+ + + GY +
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
++A ++ + Y+ L KN A+ + M K GL+P ++ Y
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344
Query: 477 VLKHLHT 483
+L+ T
Sbjct: 345 LLQGYAT 351
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 106/256 (41%), Gaps = 40/256 (15%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPI 330
AL+EM +L L M + I ++ILI ++ + +MRQ G P
Sbjct: 354 ALVEMHGLLDL--MVRNGIHPNHY---VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPD 408
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA----- 385
T+TY V+G+LCK+G+ DA E+M+ P I Y I C K+D A
Sbjct: 409 TVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELIL 468
Query: 386 -------------FN-----------------FFNQMVKRGLQPRLATHAAFIKGYFIFY 415
FN F+ MV+ G++P + T++ I GY +
Sbjct: 469 EMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAG 528
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ ++A K + + Y+ L + + K + A + EM +G+ P++ Y
Sbjct: 529 KMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYN 588
Query: 476 RVLKHLHTSHQEHMAK 491
+L+ L + + AK
Sbjct: 589 IILQGLFQTRRTAAAK 604
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 79/183 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C + ++L++EM G T+ +N ++ CK G+ ++ +L + M+
Sbjct: 447 YNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMV 506
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD ITY I C GK D A MV G++P T+ I GY R E
Sbjct: 507 RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRME 566
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA S + Y+++ + AK + + ++G + +S Y +L
Sbjct: 567 DALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIIL 626
Query: 479 KHL 481
L
Sbjct: 627 HGL 629
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 80/178 (44%), Gaps = 6/178 (3%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V YN L+ +C+ R + M + G +P TY +L G +
Sbjct: 301 EPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHG 360
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
LL+ M+ HP+ + I I + GK D A F++M ++GL P T+ I
Sbjct: 361 LLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC 420
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLY-SLLASL--HDKNNNPVMAKNVLSEMMKNGL 467
R EDA +Y D+ S N++Y SL+ SL DK + AK ++ EM+ G+
Sbjct: 421 KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDK---AKELILEMLDRGI 475
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/184 (19%), Positives = 82/184 (44%)
Query: 295 KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
+++ Y L++ + LL M + G P ++ ++ K G+ A +
Sbjct: 338 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVF 397
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
+M + +PD +TY I C+ G+ + A +F QM+ L P + + I IF
Sbjct: 398 SKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIF 457
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+++ A + ++ D+ + ++ + H K + ++ + M++ G++P++ Y
Sbjct: 458 DKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITY 517
Query: 475 RRVL 478
++
Sbjct: 518 STLI 521
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNI+++ + + ++L V + + G + TYN +L LCKN +A + + +
Sbjct: 587 YNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 646
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
+ + T+ I I +VG+ D A + F + GL P + T++
Sbjct: 647 LTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYS 693
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 68/184 (36%), Gaps = 2/184 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI C+ + L EM G P +TYN +L L + + A A EL +
Sbjct: 552 YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT 611
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ TY I + C+ D A F + LQ T I R +
Sbjct: 612 ESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRND 671
Query: 419 DAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+A + LSA+ YSL+A + ++ M +NG N + +
Sbjct: 672 EAKDLFAALSANGLVPDVRT-YSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSI 730
Query: 478 LKHL 481
++ L
Sbjct: 731 VRKL 734
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 5/212 (2%)
Query: 272 LIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI FS LG ++ V+ K E V LIK +C + ++ +G
Sbjct: 113 LINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALG 172
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
++Y ++ LCK GQ + A +LL + G+ P+ + Y I C+V + AF
Sbjct: 173 FHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAF 232
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
+ +++MV +G+ P + T+ A I G+ I + +DA + + + +++L
Sbjct: 233 DLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGF 292
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
K AKNVL+ MMK G++P+V Y ++
Sbjct: 293 CKERRLKEAKNVLAMMMKQGIKPDVFTYNSLM 324
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 103/238 (43%), Gaps = 9/238 (3%)
Query: 245 LTKKGIWRVVEVLNQ-VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILI 303
+ KGI V N + G C+V ++ ++F+ K + + V +NIL+
Sbjct: 238 MVSKGISPDVVTYNALISGFCIVGKMKDATDLFN--------KMIFENINPNVYTFNILV 289
Query: 304 KEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH 363
C+ K +++L M + G +P TYN ++ C + A + + R +
Sbjct: 290 DGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVN 349
Query: 364 PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY 423
P+ +Y I I C++ K D A N F +M + P + T+ + I G + A K
Sbjct: 350 PNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKL 409
Query: 424 VVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
V D+ + Y+ + KN+ A +L++M G++P++ Y ++ L
Sbjct: 410 VDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGL 467
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 88/201 (43%), Gaps = 12/201 (5%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+I+I C+ +L EM P +TYN ++ LCK G+ + A +L++EM
Sbjct: 355 YSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMH 414
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R D ITY + C+ + D A +M G+QP + T+ + G R E
Sbjct: 415 DRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLE 474
Query: 419 DA-YKYVVLSADKYKSSSNMLYSLLA-----SLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
DA + L Y N+ +++ L D+ + ++LS+M +NG PN
Sbjct: 475 DARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDE------SLDLLSKMEENGCIPNAV 528
Query: 473 VYRRVLKHLHTSHQEHMAKCL 493
Y ++ L + A+ L
Sbjct: 529 TYEIIICSLFDKDENDKAEKL 549
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 10/217 (4%)
Query: 285 AKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKN 344
++ V K V YN LI C K DL +M P T+N ++ CK
Sbjct: 236 SEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKE 295
Query: 345 GQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
+ +A +L M+ + PD TY + C V + + A + FN + +RG+ P + ++
Sbjct: 296 RRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSY 355
Query: 405 AAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA--SLHD---KNNNPVMAKNVL 459
+ I G+ + ++A ++ K +N++ ++ SL D K A ++
Sbjct: 356 SIMIHGFCKIKKVDEA-----MNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLV 410
Query: 460 SEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSR 496
EM G+ + Y +L L +HQ A L ++
Sbjct: 411 DEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTK 447
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 65/167 (38%), Gaps = 40/167 (23%)
Query: 271 ALIEMFSVLGLYEMA-KYVIKKTERKVSY----YNILIKEMCRRCDFKGPRDLLVEMRQV 325
+LI+ LG A K V + +R V + YN ++ +C+ LL +M+
Sbjct: 392 SLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDE 451
Query: 326 GCEPITLTYNYVLGVLCKNGQDADA----------------------------------- 350
G +P TY ++ LCKNG+ DA
Sbjct: 452 GIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDES 511
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
+LL +M C P+A+TYEI I + D A +M+ RGL
Sbjct: 512 LDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558
>gi|410109875|gb|AFV61017.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
herrerae]
Length = 395
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ +L EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 193 VYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 252
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY C+ G A + ++M +GL+P T+ I G
Sbjct: 253 QMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEG 312
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A+++ + +++Y+ L S + V A+ +L EM+ GL+PN Y
Sbjct: 313 DMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXGTYT 372
Query: 476 RVL 478
++
Sbjct: 373 MII 375
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 77/181 (42%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ C+ D + + + + + G P +++N ++ + G + L M
Sbjct: 125 FFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKNAM 184
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
PD TY + I C+ K D A F++M+ +GL P T I G+ R
Sbjct: 185 HASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRV 244
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ A + + S + Y+ L K + A +++ EM GL+P+ Y +
Sbjct: 245 DLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTL 304
Query: 478 L 478
+
Sbjct: 305 I 305
>gi|255660806|gb|ACU25572.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 418
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 85/183 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ + +L EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 206 VYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVXLAMEIYK 265
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G A + ++M +GL+P T+ I G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEG 325
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A Y + ++ Y+ L S + V A+ +L EM+ GL+P + Y
Sbjct: 326 DLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 385
Query: 476 RVL 478
++
Sbjct: 386 MII 388
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 54/115 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +N L+ + D L M+ G +P TY+ ++ LCK + DA EL E
Sbjct: 171 VVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFE 230
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
EML P+ +T+ I C+ G+ +A + QM+ + L P L T+ I G
Sbjct: 231 EMLDNGLVPNGVTFTTLIDGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYG 285
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 77/188 (40%), Gaps = 14/188 (7%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ + + + + + + + G P +++N ++ K G + L M
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
PD TY + I C+ K + A F +M+ GL P T I G+ R
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGR- 256
Query: 418 EDAYKYVVLSADKYK-------SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
V L+ + YK S + Y+ L K + A++++ EM GL+P+
Sbjct: 257 ------VXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310
Query: 471 VSVYRRVL 478
Y ++
Sbjct: 311 KITYTTLI 318
>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 85/179 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ LI ++ + + L M ++G P + Y ++ +LC + +A L +
Sbjct: 570 VVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFK 629
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M PD I+Y I CR+G A+ FN+M++RG P + T+ + + GY
Sbjct: 630 KMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMN 689
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
R + A + K + + Y++L + H + N A +L+EM +NG+ P+ Y
Sbjct: 690 RIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTY 748
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 76/176 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ILIK C + D L+ EM + P + ++ CK G +A E ML
Sbjct: 433 YSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMML 492
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P T + I CR G+ + A N N+M +G+ P L T+ A I + E
Sbjct: 493 EGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSE 552
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
A + L + S ++YS L K +N A + + M+K G+ P++ Y
Sbjct: 553 RALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAY 608
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 79/218 (36%), Gaps = 35/218 (16%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I +C++ + +L EM+ G P TY+ ++ CK G L+EEM
Sbjct: 328 YNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMK 387
Query: 359 GRNCHP-----------------------------------DAITYEIFIVYSCRVGKFD 383
N P D Y I I C G D
Sbjct: 388 YSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLD 447
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
A +MV+ L P + + + G+ + +A ++ + + S +++
Sbjct: 448 SAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVII 507
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
H + A N+++EM G+ PN+ Y V+ L
Sbjct: 508 DAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRL 545
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 14/195 (7%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K R V +++LIK + D+ ++ ++ G E T + N++L L + +
Sbjct: 173 KDAARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREF 232
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCR--VGKFDV----AFNFFNQMVKRGLQPRLAT 403
L EEM P+ TY I + + C+ G+ D+ A +M + G P + T
Sbjct: 233 LRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVT 292
Query: 404 HAAFIKGYFIFYRYEDAYKYV--VLSADKYKSSSNMLYSLLASLHD--KNNNPVMAKNVL 459
++ +I G E A +V ++SA+ + +Y A +H K A VL
Sbjct: 293 YSTYIYGLCRVGYVESALDFVRSLISANGLVN----VYCYNAIIHGLCKKGELDEALKVL 348
Query: 460 SEMMKNGLRPNVSVY 474
EM G+ P+V Y
Sbjct: 349 EEMKSCGISPDVYTY 363
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 111/295 (37%), Gaps = 64/295 (21%)
Query: 163 VIEILRVLNSEKVSALCFLKYMREIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFN 222
V+++ + LN E + F M++ F ++ D V++ + + LL D
Sbjct: 94 VVKVFKSLNWEVARHIKFSTTMKKY--GFSRSIDAFRTVVNVLALAGMHMEVYALLRDIV 151
Query: 223 VYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLY 282
Y +N AF P+L+ S K R V V + LI++F+ +
Sbjct: 152 CYYNKVNLDAFELFPILLESP----KDAARSVIVFD------------LLIKVFAANSML 195
Query: 283 EMAKYVI---KKTERKVSYY--NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYV 337
E A V KKT ++S N L+K + + R L EM+ G P TY +
Sbjct: 196 ENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIM 255
Query: 338 LGVLCK-NGQDAD-----ACELLEEMLGRNCHPDAITYEIFIVYSCRVG----------- 380
+ CK N +AD A E+LEEM P +TY +I CRVG
Sbjct: 256 MNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRS 315
Query: 381 ------------------------KFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
+ D A +M G+ P + T++ I G+
Sbjct: 316 LISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGF 370
>gi|110289336|gb|ABG66168.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
Length = 484
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ +I +C+ ++L M + G P TYN ++ C +GQ +A L+
Sbjct: 234 VVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLK 293
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M PD +TY + Y C+ G+ A F+ M KRGL+P + T+ ++GY
Sbjct: 294 KMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKG 353
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ + + L ++ ++S+L + K A V S+M + GL P+ Y
Sbjct: 354 ALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYG 413
Query: 476 RVLKHL 481
V+ L
Sbjct: 414 TVIGIL 419
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 101/224 (45%), Gaps = 12/224 (5%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTER-KVSYYNILIKEMCRRCDFKGPRDLLV 320
GSC +G L F+ LG VIKK R + L+K +C D+++
Sbjct: 99 GSCCCAGRLDL--GFAALG------NVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVL 150
Query: 321 E-MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML--GRNCHPDAITYEIFIVYSC 377
M Q+GC P +YN +L LC + +A ELL+ M G +C PD ++Y I
Sbjct: 151 RRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFF 210
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ G D A+ +++M+ RG+ P + T+++ I + A + + +
Sbjct: 211 KEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCR 270
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y+ + + + P A L +M +G+ P+V Y ++ +L
Sbjct: 271 TYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYL 314
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 78/187 (41%), Gaps = 2/187 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVG--CEPITLTYNYVLGVLCKNGQDADACELLEE 356
YNIL+K +C + +LL M G C P ++Y V+ K G A E
Sbjct: 165 YNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHE 224
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
ML R P+ +TY I C+ D A MVK G+ P T+ + + GY +
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
++A ++ + Y+ L KN A+ + M K GL+P ++ Y
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344
Query: 477 VLKHLHT 483
+L+ T
Sbjct: 345 LLQGYAT 351
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 68/154 (44%), Gaps = 1/154 (0%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V YN L+ +C+ R + M + G +P TY +L G +
Sbjct: 301 EPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHG 360
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
LL+ M+ HP+ + I I + GK D A F++M ++GL P T+ I
Sbjct: 361 LLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC 420
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLY-SLLASL 445
R EDA +Y D+ S N++Y SL+ SL
Sbjct: 421 KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSL 454
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 5/119 (4%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPI 330
AL+EM +L L M + I ++ILI ++ + +MRQ G P
Sbjct: 354 ALVEMHGLLDL--MVRNGIHPNHY---VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPD 408
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFF 389
T+TY V+G+LCK+G+ DA E+M+ P I Y I C K+D A ++F
Sbjct: 409 TVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKDYF 467
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 56/129 (43%)
Query: 295 KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
+++ Y L++ + LL M + G P ++ ++ K G+ A +
Sbjct: 338 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVF 397
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
+M + +PD +TY I C+ G+ + A +F QM+ L P + + I IF
Sbjct: 398 SKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIF 457
Query: 415 YRYEDAYKY 423
+++ A Y
Sbjct: 458 DKWDKAKDY 466
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 98/228 (42%), Gaps = 5/228 (2%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEM 306
RV+E++ G V AL++ F G A ++ K YN+LI+
Sbjct: 167 RVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQ 226
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
C + LL M G TYN ++ LCK+G+ AC L + + R P+A
Sbjct: 227 CIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNA 286
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
+T+ I C+ GK D+A+ F +MV G P T+++FI+ ++ ++
Sbjct: 287 VTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGE 346
Query: 427 SADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
K S + Y+++ K N + EM+ +G P+V Y
Sbjct: 347 MLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTY 394
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 82/192 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ++ CR K ++L EM + G P +T V+ CK G+ +DA +LE M
Sbjct: 114 YAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMK 173
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R C P+ TY + C GK A N+M G+ P T+ I+G I E
Sbjct: 174 LRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIE 233
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A++ + L + Y+ L + K+ A ++ + G++PN + ++
Sbjct: 234 SAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLI 293
Query: 479 KHLHTSHQEHMA 490
L S + +A
Sbjct: 294 NGLCKSGKADIA 305
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 75/183 (40%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N LI +C+ L +M GC P T TY+ + LCK + + EML
Sbjct: 289 FNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEML 348
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
++ P + Y I I + + + + +MV G P + T+ ++ Y I R
Sbjct: 349 QKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLN 408
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A ++ + + M Y+ L H A ++L +M PN Y +L
Sbjct: 409 EAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILL 468
Query: 479 KHL 481
+HL
Sbjct: 469 RHL 471
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 62/150 (41%), Gaps = 4/150 (2%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M + G P T+N ++ C+ Q A +L ++M R D ++Y I C G+
Sbjct: 1 MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
D A F +M QP + +AA +KG R E+ + + S Y+
Sbjct: 61 IDEAVELFGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
+ + A+ +L EM + GL P V
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCV 146
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 93/225 (41%), Gaps = 19/225 (8%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y ++ C ++L+EM + G T+ YN ++ GQ A +L+
Sbjct: 391 VVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILK 450
Query: 356 EMLGRNCHPDAITYEIFIVYSCRV------------GKFDV-----AFNFFNQMVKRGLQ 398
+M P+ TY I + + R+ G + F F+ M K
Sbjct: 451 QMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFL 510
Query: 399 PRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNV 458
P T+++ ++G+ R E+A V L + S + +Y+ L + K+ + A +
Sbjct: 511 PNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVL 570
Query: 459 LSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAK--CLSSRYSSLS 501
+ M+++G P + Y+ +L L Q AK ++SR+ S
Sbjct: 571 VCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYS 615
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 8/124 (6%)
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
M+ PDA T+ IV CR + DVA + F++M RG + ++A I+G R
Sbjct: 1 MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASL--HDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
++A V L + + +M +L+ L ++ ++ +L M + G RP+ Y
Sbjct: 61 IDEA---VELFGEMDQPDMHMYAALVKGLCNAERGEEGLL---MLRRMKELGWRPSTRAY 114
Query: 475 RRVL 478
V+
Sbjct: 115 AAVV 118
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 80/218 (36%), Gaps = 12/218 (5%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
G C + V ++F + L A+ V+ Y LI+ +C +L E
Sbjct: 19 GYCRTNQVDVARDLFDKMPLRGFAQDVVS--------YATLIEGLCEAGRIDEAVELFGE 70
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M Q P Y ++ LC + + +L M P Y + + CR K
Sbjct: 71 MDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERK 126
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
A +M ++GL P + T A I Y R DA + + L + + Y+
Sbjct: 127 AKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNA 186
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
L A +L++M G+ P+ Y +++
Sbjct: 187 LVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIR 224
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 83/186 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+S Y+ LI+ C D +DL+++M G P +N+++ LCK G+ DA + +
Sbjct: 461 ISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFD 520
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ HP+ + Y + C VGK + A F+ MV G+QP + + + GY
Sbjct: 521 FTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVG 580
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R ++ K S LY+++ + V AK EM ++G+ + Y
Sbjct: 581 RIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYS 640
Query: 476 RVLKHL 481
VL L
Sbjct: 641 IVLGGL 646
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 95/216 (43%), Gaps = 5/216 (2%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
+LI +S G ++ A V KK + V N L+ +C+ K RD+ M
Sbjct: 291 SLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMK 350
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G + +Y +L G D EL ML PD+ + + I + G D A
Sbjct: 351 GQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRA 410
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
FN+M ++G++P + T++ I + +DA + D+ + S Y L
Sbjct: 411 TIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQG 470
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + + AK+++ +MM G+RP++ + ++ +L
Sbjct: 471 FCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNL 506
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 86/187 (45%), Gaps = 12/187 (6%)
Query: 299 YNILIKEMCRRCDFK-GPRDLLVEMRQVG---CEPITLTYNYVLGVLCKNGQDADACELL 354
Y I++K +C D K G D L+ M G C P + YN V+ K G AC+L
Sbjct: 182 YCIVLKSLCS--DRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLF 239
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
EM+ R PD TY + C+ D A QMV +G+ P T+ + I GY
Sbjct: 240 NEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSST 299
Query: 415 YRYEDAYKYV-VLSADKYKSSSNMLYSLLASL--HDKNNNPVMAKNVLSEMMKNGLRPNV 471
++++A + +++ L SL+ASL H K + A++V M G + ++
Sbjct: 300 GQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKD---ARDVFDSMAMKGQKTDI 356
Query: 472 SVYRRVL 478
Y+ +L
Sbjct: 357 FSYKIML 363
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 2/166 (1%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML--GRNCHPDAITYEIFIVY 375
LL M +GC P +Y VL LC + + A ELL M G C P+A+ Y I
Sbjct: 166 LLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDG 225
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
+ G + A + FN+MV+RG+ P L+T+ + + A + DK
Sbjct: 226 FFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPD 285
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
N Y+ L + A V +M G+ P+V ++ L
Sbjct: 286 NWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASL 331
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 79/186 (42%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+S YN ++ +C+ +L +M G P TYN ++ GQ +A + +
Sbjct: 251 LSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSK 310
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M + PD +T + C+ GK A + F+ M +G + + ++ + GY
Sbjct: 311 KMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKG 370
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
D + L + + ++++L + K A + +EM + G+ P+V Y
Sbjct: 371 CLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYS 430
Query: 476 RVLKHL 481
V+ L
Sbjct: 431 TVIAAL 436
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 75/181 (41%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I + D DL EM Q G P TYN V+ LCK A +L +M+
Sbjct: 219 YNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMV 278
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD TY I G++ A +M +G+ P + T + + + +
Sbjct: 279 DKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIK 338
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA A K + + Y ++ + + V + + M+ +G+ P+ ++ ++
Sbjct: 339 DARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLI 398
Query: 479 K 479
K
Sbjct: 399 K 399
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 78/187 (41%), Gaps = 2/187 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN L+ C + + M G +P + Y ++ CK G+ + L
Sbjct: 531 VMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFR 590
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
E+L + P Y I + + G+ A F++M + G+ T++ + G F
Sbjct: 591 EILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNS 650
Query: 416 RYEDA-YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
++A + L A K L ++A + + AK++ + + ++GL P+V Y
Sbjct: 651 CSDEAILLFKELHAMNVKIDITTLNIMIAGMF-QIRRVEEAKDLFASISRSGLVPSVVTY 709
Query: 475 RRVLKHL 481
++ +L
Sbjct: 710 SIMMTNL 716
Score = 38.1 bits (87), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 55/126 (43%)
Query: 280 GLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
GL + + K + + YNI++ + + + EM + G TY+ VLG
Sbjct: 585 GLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLG 644
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
L KN +A L +E+ N D T I I ++ + + A + F + + GL P
Sbjct: 645 GLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVP 704
Query: 400 RLATHA 405
+ T++
Sbjct: 705 SVVTYS 710
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 118/276 (42%), Gaps = 13/276 (4%)
Query: 231 KAFGFLPVLISSKALTK--------KGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLY 282
KA G P +++ +L + + ++V + + G + V ALI FS G
Sbjct: 227 KAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRM 286
Query: 283 EMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYV 337
E A + +R+ V ++ + C+ + L +MR G P TY +
Sbjct: 287 EKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSL 346
Query: 338 LGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
+ CK G+ DA LL+EM+ + P+ +TY + + C+ GK A N + M + G+
Sbjct: 347 VDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGV 406
Query: 398 QPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKN 457
+ + I G+F+ E A + +K LY L K+ AK+
Sbjct: 407 KANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKS 466
Query: 458 VLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
+L +M GLRPN +Y ++ L + +E A L
Sbjct: 467 LLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVAL 502
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 87/185 (47%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K E VS Y LI +C+ + LL +M G P T+ Y ++ L K G++++
Sbjct: 439 KGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESE 498
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A LL ++L P+ +TY I C+ G A + FN+M + GL P + + A I
Sbjct: 499 AVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALID 558
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
G+ A + DK S ++Y+ L + K N A + ++M+++GL+
Sbjct: 559 GFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQL 618
Query: 470 NVSVY 474
++ Y
Sbjct: 619 DLYCY 623
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 85/182 (46%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
EM++ G +T++ + CK G +A +L +M R P+ TY + +C+ G
Sbjct: 295 EMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAG 354
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+ D A ++MV +GL P + T+ + G + +A + L ++ +LY+
Sbjct: 355 RLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYT 414
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSL 500
L H NNN A ++L++M G+ +VS+Y ++ L + AK L + +
Sbjct: 415 TLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGC 474
Query: 501 SL 502
L
Sbjct: 475 GL 476
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +NI+I +C+ + R L V M+ +GC P +TYN ++ K G + +L+
Sbjct: 200 VFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVS 259
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM C D +TY I + G+ + A+++F +M ++G+ + T + F+ +
Sbjct: 260 EMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEG 319
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
++A K + + Y+ L K A +L EM+ GL PNV Y
Sbjct: 320 LVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTY 378
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 59/146 (40%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P T+N V+ LCK G+ +A L M C PD +TY I + G +
Sbjct: 198 PNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQL 257
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
++M K G + T+ A I + F R E AY Y + ++ + +S K
Sbjct: 258 VSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCK 317
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVY 474
A + ++M G+ PN Y
Sbjct: 318 EGLVQEAMKLFAQMRVRGMMPNEFTY 343
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 67/179 (37%), Gaps = 35/179 (19%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y LI +C+ +MR++G +P Y ++ CK G A L+
Sbjct: 515 VVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMN 574
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM+ + D + Y I + AF +M++ GLQ L + FI G+
Sbjct: 575 EMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGF---- 630
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ NM+ A+ VLSEM+ G+ P+ +VY
Sbjct: 631 -----------------CNMNMMQE--------------ARGVLSEMIGTGITPDKTVY 658
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
DLL +M+ G E Y ++ LCK+ + +A LL +M G P+ + Y +
Sbjct: 431 DLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDAL 490
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ GK A ++++ G QP + T+ A I G
Sbjct: 491 FKAGKESEAVALLHKILDSGFQPNVVTYCALIDG 524
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 81/189 (42%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K E V Y +LI +C+ R +L EM + G P +TYN ++ CK G D
Sbjct: 328 KGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDD 387
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A E+L+ M +C P+ TY I C+ K A N+M++R L P L T+ + I
Sbjct: 388 AFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIH 447
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
G E AY+ + L + YS+ K A + + G++
Sbjct: 448 GQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKA 507
Query: 470 NVSVYRRVL 478
N +Y ++
Sbjct: 508 NEVIYTALI 516
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 2/196 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI C+ LL M C P + TYN ++ LCK + +A L+ +ML
Sbjct: 512 YTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKML 571
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P +TY I I + G FD A FN MV G QP + T+ AF+ YF E
Sbjct: 572 TMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLE 631
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ + ++ + Y++L + + A + L M+ G +P++ + ++
Sbjct: 632 EVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILI 691
Query: 479 KHLHTSHQEHMAKCLS 494
K+L SH+ M + S
Sbjct: 692 KNL--SHENRMKETRS 705
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 103/241 (42%), Gaps = 14/241 (5%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
G C GV E+F + M + ++ E VSY N LI +C L +
Sbjct: 238 GHCRNKGVDNAYEVFLI-----MPQKGCQRNE--VSYTN-LIHGLCEAGRINEALKLFAD 289
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M + C P TY ++ L +G+ +A L EM + C P+ TY + I C+ K
Sbjct: 290 MTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENK 349
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
D A ++M ++GL P + T+ A I GY +DA++ + L + Y+
Sbjct: 350 MDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNE 409
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLS 501
L K A +L++M++ L P++ Y ++ H + L S Y LS
Sbjct: 410 LICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLI------HGQCKVNDLESAYRLLS 463
Query: 502 L 502
L
Sbjct: 464 L 464
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 90/208 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI CR ++ + M Q GC+ ++Y ++ LC+ G+ +A +L +M
Sbjct: 232 YTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMT 291
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
NC P TY + I G+ A N FN+M ++G +P + T+ I G + +
Sbjct: 292 EDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMD 351
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A K + ++K S + Y+ L + K A +L M N PN Y ++
Sbjct: 352 EARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELI 411
Query: 479 KHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
L + H A L ++ L S+
Sbjct: 412 CGLCKKRKVHKAMALLNKMLERKLSPSL 439
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 78/176 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C++ LL +M + P +TYN ++ CK A LL M
Sbjct: 407 YNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMN 466
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD TY +FI C+ G+ + A F+ + +G++ + A I GY + +
Sbjct: 467 ENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKID 526
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
AY + + ++ Y++L K A +++++M+ G++P V Y
Sbjct: 527 VAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTY 582
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 80/196 (40%), Gaps = 7/196 (3%)
Query: 318 LLVEMRQVGCE-------PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYE 370
L+ EM+ V E P T+N ++ CK G +A +++ HPD TY
Sbjct: 174 LIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYT 233
Query: 371 IFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADK 430
I+ CR D A+ F M ++G Q ++ I G R +A K +
Sbjct: 234 SLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTED 293
Query: 431 YKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
+ Y++L + V A N+ +EM + G PNV Y ++ L ++ A
Sbjct: 294 NCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEA 353
Query: 491 KCLSSRYSSLSLGSSV 506
+ + S S L SV
Sbjct: 354 RKMLSEMSEKGLIPSV 369
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 53/126 (42%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
+AK + + V Y ILI EM + F + M +G +P TY L
Sbjct: 567 VAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFS 626
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
G + +++ +M PD +TY + I R+G AF+F MV G +P L
Sbjct: 627 QGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYI 686
Query: 404 HAAFIK 409
+ IK
Sbjct: 687 VSILIK 692
Score = 38.1 bits (87), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 80/188 (42%), Gaps = 26/188 (13%)
Query: 206 GRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISS-------------KALTKKGIWR 252
G L D T L++ + ++ L +AF FL ++ + K L+ + R
Sbjct: 644 GILPDLVTYTVLIDGYA--RLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHEN--R 699
Query: 253 VVEVLNQVG-------GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKE 305
+ E +++G S ++ V +E L L+E K V VS Y LI
Sbjct: 700 MKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFE--KMVEHGCTIDVSIYGALIAG 757
Query: 306 MCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPD 365
C++ + + L+ M++ G P YN +L CK G A+A L++ M+ P
Sbjct: 758 FCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPL 817
Query: 366 AITYEIFI 373
+Y++ +
Sbjct: 818 LESYKLLV 825
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 81/184 (44%), Gaps = 6/184 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ++I CR + EM GC P +TYN +L LCK + DA LL EM
Sbjct: 273 YTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMR 332
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R PD T+ I C GK D A F+ M+ + L+P + T+ I G R
Sbjct: 333 ERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDG---MCRQG 389
Query: 419 DAYKYVVLSADKYKSS---SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
D K L D + +++ YS+L H + A L EM+ G+ PN+ Y
Sbjct: 390 DLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYN 449
Query: 476 RVLK 479
++K
Sbjct: 450 SIIK 453
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 78/176 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI MCR+ D DL +M P +TY+ ++ C+ GQ DA L+EM+
Sbjct: 378 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 437
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+ +TY I CR G F +M+ + P L T+ I GY +
Sbjct: 438 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH 497
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
DA+K + + + + Y++L + + N A + +M G+ P+ Y
Sbjct: 498 DAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTY 553
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 87/195 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN L+ +C+ LL EMR+ G P T+ ++ C G+ A +L +
Sbjct: 305 VVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFD 364
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
ML + PD +TY I CR G D A + ++ M R + P T++ I +
Sbjct: 365 TMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKG 424
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ EDA+ ++ +K + M Y+ + + ++ N + L +MM N + P++ Y
Sbjct: 425 QVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYN 484
Query: 476 RVLKHLHTSHQEHMA 490
++ + H A
Sbjct: 485 TLIHGYIKEDKMHDA 499
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 55/124 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +IK CR + + L +M P +TYN ++ K + DA +LL M
Sbjct: 448 YNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMME 507
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD +TY + I G A F +M +G++P T+ + I G+ +
Sbjct: 508 KEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSK 567
Query: 419 DAYK 422
+A++
Sbjct: 568 EAFQ 571
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 82/221 (37%), Gaps = 32/221 (14%)
Query: 201 VIDNCGRLDDYETMRQLLNDFNVYQVCLN-----------------EKAFGFLPVLISSK 243
+ID R D + L +D + ++ N E AFGFL +I+
Sbjct: 381 LIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMIN-- 438
Query: 244 ALTKKGIWRVVEVLNQV-GGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNIL 302
KGI + N + G C V G + K ++ K + YN L
Sbjct: 439 ----KGILPNIMTYNSIIKGYCRSGNVSK--------GQKFLQKMMVNKVSPDLITYNTL 486
Query: 303 IKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNC 362
I + LL M + +P +TYN ++ +G +A + E+M +
Sbjct: 487 IHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGI 546
Query: 363 HPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
PD TY I G AF ++M++RG + R A
Sbjct: 547 EPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGKEKRRAA 587
>gi|449445409|ref|XP_004140465.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Cucumis sativus]
gi|449518107|ref|XP_004166085.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Cucumis sativus]
Length = 578
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 137/328 (41%), Gaps = 6/328 (1%)
Query: 166 ILRVLNSEKVSALCFLKYMREIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQ 225
+L L ++++ + Y + I N I +++I C + D E QL+ + +
Sbjct: 161 LLNSLAKDRLTDTVWKSYKKMIRVGVVPNIHIYNVLIHACCKSGDVEKAEQLVCEMELKS 220
Query: 226 VCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLG-LYEM 284
V + + L L S K+L + + V + + + G S + +LI F G + E
Sbjct: 221 VFPDLYTYNTLISLYSRKSLHYEAL-CVQDRMERAGVSPDIVTYNSLIYGFCKEGKMREA 279
Query: 285 AKYV--IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLC 342
K IK Y LI CR DF+ L M G TYN VL LC
Sbjct: 280 VKLFREIKDVSPNHVTYTTLIDGYCRVNDFEEALRLCKVMEAKGLHLGVATYNSVLRKLC 339
Query: 343 KNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLA 402
+ G+ DA +LL EM R PD +T I C++G A ++M+ GLQ
Sbjct: 340 EEGRIRDANKLLNEMGERKVEPDNVTCNTLINAYCKIGDMKSALKVKSKMLDAGLQLDSF 399
Query: 403 THAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM 462
T+ A I G+ E A + + D S YS L + + N ++L E
Sbjct: 400 TYKALIHGFCWVRDMESAKELLFCMLDVGLSPGYCTYSWLVDGYCELGNEGAIISLLDEF 459
Query: 463 MKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
+ G ++SV R +++ L HQE +
Sbjct: 460 LTKGYCVDLSVCRALIRRL--CHQERVG 485
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 96/248 (38%), Gaps = 46/248 (18%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
LI+ + + +E A + K E K V+ YN +++++C + LL EM +
Sbjct: 298 TLIDGYCRVNDFEEALRLCKVMEAKGLHLGVATYNSVLRKLCEEGRIRDANKLLNEMGER 357
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
EP +T N ++ CK G A ++ +ML D+ TY+ I C V + A
Sbjct: 358 KVEPDNVTCNTLINAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFCWVRDMESA 417
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGY---------------FIFYRY------------- 417
M+ GL P T++ + GY F+ Y
Sbjct: 418 KELLFCMLDVGLSPGYCTYSWLVDGYCELGNEGAIISLLDEFLTKGYCVDLSVCRALIRR 477
Query: 418 ----------EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
E Y + L S +++Y+ LA + K+ + +LSEM K L
Sbjct: 478 LCHQERVGFAEKIYSTMHLRG---VSGDSVIYTSLAYAYWKDGKSNLVSEMLSEMTKRSL 534
Query: 468 RPNVSVYR 475
N+ +YR
Sbjct: 535 LINLKLYR 542
>gi|449436014|ref|XP_004135789.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Cucumis sativus]
Length = 460
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 89/188 (47%)
Query: 294 RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACEL 353
R + +N+L+ + F ++ + ++ P +++YN ++ K G AC L
Sbjct: 149 RTLQSFNVLLNTLVDCDQFSKASEIFQQAYEMDFRPNSVSYNIMIKGWIKKGGWEQACNL 208
Query: 354 LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
+EML + P +TY F+ CR G+ D A F M ++G P T+A ++G+
Sbjct: 209 FDEMLEKGVQPSVVTYNSFLGVLCRKGEMDTALCLFKNMTEKGHHPNAVTYALLMEGWCF 268
Query: 414 FYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
+Y++A K + + Y +L + K N +++L+EM K L+P+V
Sbjct: 269 IGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHLGKTGNIDEMESLLNEMKKRRLKPDVVT 328
Query: 474 YRRVLKHL 481
Y ++ +L
Sbjct: 329 YNILVNYL 336
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTE------RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
L+E + +G Y+ AK ++ E R V+Y +L+ + + + LL EM++
Sbjct: 262 LMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNY-GVLMTHLGKTGNIDEMESLLNEMKKR 320
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
+P +TYN ++ LCK G+ DA ++L +M C P+A TY + I C G FD A
Sbjct: 321 RLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDPNAATYRMMIDGYCNAGDFDGA 380
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKG 410
N M+ G P L T A+ + G
Sbjct: 381 MKILNAMLMSGHYPHLKTFASLVVG 405
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 83/191 (43%), Gaps = 3/191 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +L++ C +K + L+ +M GC+ + Y ++ L K G + LL EM
Sbjct: 259 YALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHLGKTGNIDEMESLLNEMK 318
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R PD +TY I + Y C+ GK A+ +M G P AT+ I GY ++
Sbjct: 319 KRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDPNAATYRMMIDGYCNAGDFD 378
Query: 419 DAYKYV--VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
A K + +L + Y SL+ L NN VL EM K LR + +R
Sbjct: 379 GAMKILNAMLMSGHYPHLKT-FASLVVGLLKGENNDDYVCFVLEEMEKRQLRFDAETWRI 437
Query: 477 VLKHLHTSHQE 487
++ + H E
Sbjct: 438 LIMDVCGQHVE 448
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 90/211 (42%), Gaps = 35/211 (16%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNI+IK ++ ++ +L EM + G +P +TYN LGVLC+ G+ A L + M
Sbjct: 189 YNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSFLGVLCRKGEMDTALCLFKNMT 248
Query: 359 GRNCHPDAITYEIFIVYSCRVGK--------FDVAFN----------------------- 387
+ HP+A+TY + + C +GK FD+ F+
Sbjct: 249 EKGHHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHLGKTGNID 308
Query: 388 ----FFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
N+M KR L+P + T+ + + DAYK +V + Y ++
Sbjct: 309 EMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDPNAATYRMMI 368
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + A +L+ M+ +G P++ +
Sbjct: 369 DGYCNAGDFDGAMKILNAMLMSGHYPHLKTF 399
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 81/183 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ + + K LL M GC P +T+ ++ LCK G+ A +++EM+
Sbjct: 74 YNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMV 133
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R PD + + + C +G+ D A+ FF Q++ G P T+ + G + R E
Sbjct: 134 DRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLE 193
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + L A+ + S + +++ K N A M + G+ PN Y ++
Sbjct: 194 AAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALI 253
Query: 479 KHL 481
L
Sbjct: 254 DGL 256
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 65/136 (47%), Gaps = 8/136 (5%)
Query: 299 YNILIKEMC---RRCD-FKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
YN+LI +C R CD F R + Q G P +TY+ V+ LC++ + C+LL
Sbjct: 4 YNVLINGLCKAGRVCDAFTAFRKAI----QFGFRPTVVTYSTVIDGLCRDNEVDKGCKLL 59
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
EEM GR C P+A+TY + G+ AF+ +M G P L T IKG
Sbjct: 60 EEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKE 119
Query: 415 YRYEDAYKYVVLSADK 430
E A++ V D+
Sbjct: 120 GEIEAAFRVVDEMVDR 135
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 96/225 (42%), Gaps = 3/225 (1%)
Query: 258 NQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRD 317
N V S L+ G+ + +M L L +AK V Y+ ++ + + +
Sbjct: 542 NVVTYSTLIDGLSKMAKMDEALQL--LAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVV 599
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
+L +MR GC P +TYN ++ K + +A LL EML HP +TY C
Sbjct: 600 VLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLC 659
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV-LSADKYKSSSN 436
R G+FD A + M RG P T+++ + G R +A Y ++ D+ +
Sbjct: 660 RSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHV 719
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ YS L K A L M++ G P+V + ++ L
Sbjct: 720 IAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGL 764
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 75/176 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ + + + LL M + G P +T+N VL LCK + DA + + L
Sbjct: 476 YNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRAL 535
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R C P+ +TY I ++ K D A +MV+ G + T++ + G R E
Sbjct: 536 ERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRME 595
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
DA + D + Y+ L K A +L EM++ G P+V Y
Sbjct: 596 DAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTY 651
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 3/176 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI + + +LL M G P Y V+ L K G A +LL+EM
Sbjct: 860 YNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMR 919
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R PD TY I I + + +A ++F +M+++ L+P +++ I + + +
Sbjct: 920 SRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVD 979
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
DA+K +L + + + M +++ SL KN A V+ EM P + ++
Sbjct: 980 DAWK--LLRSSGIEPTITMYSTMVDSLC-KNRGTDKALEVIREMKSKNCEPGIHIW 1032
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 94/237 (39%), Gaps = 11/237 (4%)
Query: 258 NQVGGSCLVSGVRALIEMFSVLGLYE-MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPR 316
N + S +V G+ + LG +E MA+ + V Y+ LI +C+
Sbjct: 682 NAITYSSIVDGLCKAGRVTEALGYFEKMARDEV--VAPHVIAYSALIDGLCKAGRIDEAY 739
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
+ L M + G P +T++ ++ LC G+ EL M R C D Y I
Sbjct: 740 EFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAY 799
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY---VVLSADKYKS 433
C G+F A+ +M G+ TH IK R ++A Y + S
Sbjct: 800 CLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEIS 859
Query: 434 SSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
+ ++ SL+AS + A +L M+ +G P+ Y V+ L + +A
Sbjct: 860 YNTLITSLVASRRSEQ-----ALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVA 911
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 1/157 (0%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M QV C P +TYN ++ L K+G DA LLE M+ PD IT+ + C+ +
Sbjct: 465 MVQV-CRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQR 523
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
A N F + ++RG +P + T++ I G + ++A + + + ++ + YS
Sbjct: 524 ILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYST 583
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ K A VL +M G P+ Y ++
Sbjct: 584 VVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLI 620
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 70/176 (39%), Gaps = 2/176 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I C + +F LL EM+ G T+T+ V+ LC N + +A +
Sbjct: 792 YNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHS-I 850
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+C D I+Y I + + A MV G P + + G F E
Sbjct: 851 PEDCR-DEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPE 909
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
A K + + S Y+++ S K +A + EM++ L+P+ VY
Sbjct: 910 VAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVY 965
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 83/219 (37%), Gaps = 25/219 (11%)
Query: 288 VIKKTER---KVSYYNILIKEMCRRCDFKGPRDLLVEMRQV-GCEPITLTYNYVLGVLCK 343
++++TE V ++ LI+ +C ++ M V G P TY ++L LCK
Sbjct: 370 LMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCK 429
Query: 344 NGQDADACELLEEMLGRN---------------------CHPDAITYEIFIVYSCRVGKF 382
G + E+ML R C P +TY + + G
Sbjct: 430 AGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMV 489
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
A M++ GL P + T + + G R DA+ + ++ + + YS L
Sbjct: 490 RDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTL 549
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K A +L++M++ G R N Y V+ L
Sbjct: 550 IDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGL 588
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 88/205 (42%), Gaps = 7/205 (3%)
Query: 242 SKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVI--KKTERKVSYY 299
SKA G + + + Q G S ALI+ G ++A ++ K ++ + +
Sbjct: 222 SKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAF 281
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
+ L+ +C+ + LL M C P + +N ++ LC+ + +A EL + M
Sbjct: 282 SSLLHGLCQAHRLEEAIQLLKAMP---CVPNVVCFNSLMNGLCQARRVDEAFELFDVMKE 338
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK-RGLQPRLATHAAFIKGYFIFYRYE 418
C D ITY I + C++ + A+ M + G P + T + I+G R
Sbjct: 339 SGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVN 398
Query: 419 DAYK-YVVLSADKYKSSSNMLYSLL 442
A++ Y + A + S + Y+ L
Sbjct: 399 QAWEVYERMVAVEGISPNRFTYAFL 423
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 81/189 (42%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K E V Y +LI +C+ R +L EM + G P +TYN ++ CK G D
Sbjct: 328 KGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDD 387
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A E+L+ M +C P+ TY I C+ K A N+M++R L P L T+ + I
Sbjct: 388 AFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIH 447
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
G E AY+ + L + YS+ K A + + G++
Sbjct: 448 GQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKA 507
Query: 470 NVSVYRRVL 478
N +Y ++
Sbjct: 508 NEVIYTALI 516
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 86/193 (44%), Gaps = 2/193 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI C+ LL M C P + TYN ++ LCK + +A L+ +ML
Sbjct: 512 YTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKML 571
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P +TY I I + G FD A FN MV G QP + T+ AF+ YF E
Sbjct: 572 TMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLE 631
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ + ++ + Y++L + + A + L M+ G +P++ + ++
Sbjct: 632 EVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILI 691
Query: 479 KHLHTSHQEHMAK 491
K+L SH+ M +
Sbjct: 692 KNL--SHENRMKE 702
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 103/241 (42%), Gaps = 14/241 (5%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
G C GV E+F + M + ++ E VSY N LI +C L +
Sbjct: 238 GHCRNKGVDNAYEVFLI-----MPQKGCQRNE--VSYTN-LIHGLCEAGRINEALKLFAD 289
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M + C P TY ++ L +G+ +A L EM + C P+ TY + I C+ K
Sbjct: 290 MTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENK 349
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
D A ++M ++GL P + T+ A I GY +DA++ + L + Y+
Sbjct: 350 MDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNE 409
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLS 501
L K A +L++M++ L P++ Y ++ H + L S Y LS
Sbjct: 410 LICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLI------HGQCKVNDLESAYRLLS 463
Query: 502 L 502
L
Sbjct: 464 L 464
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI CR ++ + M Q GC+ ++Y ++ LC+ G+ +A +L +M
Sbjct: 232 YTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMT 291
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
NC P TY + I G+ A N FN+M ++G +P + T+ I G + +
Sbjct: 292 EDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMD 351
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A K + ++K S + Y+ L + K A +L M N PN Y ++
Sbjct: 352 EARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELI 411
Query: 479 KHLHTSHQEHMAKCLSSR 496
L + H A L ++
Sbjct: 412 CGLCKKRKVHKAMALLNK 429
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 78/176 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C++ LL +M + P +TYN ++ CK A LL M
Sbjct: 407 YNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMN 466
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD TY +FI C+ G+ + A F+ + +G++ + A I GY + +
Sbjct: 467 ENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKID 526
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
AY + + ++ Y++L K A +++++M+ G++P V Y
Sbjct: 527 VAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTY 582
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 80/196 (40%), Gaps = 7/196 (3%)
Query: 318 LLVEMRQVGCE-------PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYE 370
L+ EM+ V E P T+N ++ CK G +A +++ HPD TY
Sbjct: 174 LIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYT 233
Query: 371 IFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADK 430
I+ CR D A+ F M ++G Q ++ I G R +A K +
Sbjct: 234 SLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTED 293
Query: 431 YKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
+ Y++L + V A N+ +EM + G PNV Y ++ L ++ A
Sbjct: 294 NCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEA 353
Query: 491 KCLSSRYSSLSLGSSV 506
+ + S S L SV
Sbjct: 354 RKMLSEMSEKGLIPSV 369
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 53/126 (42%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
+AK + + V Y ILI EM + F + M +G +P TY L
Sbjct: 567 VAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFS 626
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
G + +++ +M PD +TY + I R+G AF+F MV G +P L
Sbjct: 627 QGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYI 686
Query: 404 HAAFIK 409
+ IK
Sbjct: 687 VSILIK 692
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 101/250 (40%), Gaps = 23/250 (9%)
Query: 206 GRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISS-------------KALTKKGIWR 252
G L D T L++ + ++ L +AF FL ++ + K L+ + R
Sbjct: 644 GILPDLVTYTVLIDGYA--RLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHEN--R 699
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDF 312
+ E +++G + V +E L L+E K V VS Y LI C++
Sbjct: 700 MKETRSEIG----IDSVSNTLEYEIALKLFE--KMVEHGCTIDVSIYGALIAGFCQQERL 753
Query: 313 KGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIF 372
+ + L+ M++ G P YN +L CK G A+A L++ M+ P +Y++
Sbjct: 754 EEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLL 813
Query: 373 IVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYK 432
+ G + A F+ ++ G I G ++ + + + +K
Sbjct: 814 VCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGC 873
Query: 433 SSSNMLYSLL 442
+ + YSLL
Sbjct: 874 QPNPLTYSLL 883
>gi|414887034|tpg|DAA63048.1| TPA: crs2 associated factor1 [Zea mays]
Length = 617
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 120/288 (41%), Gaps = 38/288 (13%)
Query: 207 RLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLV 266
R+ + Q+L++ + V +E + L A T+ G W +L +
Sbjct: 311 RIASLKNAEQVLDEMSQCGVAPDEATYSLL-----VDAYTRAGRWESARILLK---EMEA 362
Query: 267 SGVRALIEMFSVL-------GLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKG 314
GV+ +FS + G ++ A V+++ + +YN++I +
Sbjct: 363 DGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGH 422
Query: 315 PRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIV 374
D +MR+ G EP +T+N ++ CK G+ A EL EEM NC P TY I I
Sbjct: 423 AMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMIN 482
Query: 375 YSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV-VLSADKYKS 433
++ ++M ++GL P + T+ + Y RY++A + + AD K
Sbjct: 483 LLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKP 542
Query: 434 SSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
S M ++L+ + + GLRP+V Y ++K L
Sbjct: 543 SPTMYHALV-----------------NAYAQRGLRPDVITYTTLMKAL 573
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 92/226 (40%), Gaps = 22/226 (9%)
Query: 199 SLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIW-RVVEVL 257
SL++D R +E+ R LL + V ++ F +L + +G W + VL
Sbjct: 338 SLLVDAYTRAGRWESARILLKEMEADGV--KPSSYVFSRILAGFR---DRGDWQKAFAVL 392
Query: 258 NQVGGSCLVSGVRALIEMFSVL----GLYEMAKYVI--------KKTERKVSYYNILIKE 305
++ S GVR ++V+ G Y + + + E V +N LI
Sbjct: 393 REMQAS----GVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDA 448
Query: 306 MCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPD 365
C+ +L EMR+ C P T TYN ++ +L + +L EM + P+
Sbjct: 449 HCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPN 508
Query: 366 AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
ITY + R G++ A + M GL+P + A + Y
Sbjct: 509 IITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAY 554
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 68/340 (20%), Positives = 125/340 (36%), Gaps = 45/340 (13%)
Query: 178 LCFLKYMRE--IMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGF 235
L L +RE +P+ S + + ++ N D + +LL D ++ + F
Sbjct: 175 LRLLSLLREHDFLPDLASYSHLLASLL-NTRDPPDAALLERLLGDLRESRLEPDAPLFSD 233
Query: 236 LPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAK------YVI 289
L + AL + ++ +G + + V ALI G A+ ++
Sbjct: 234 LISAFARAALPDAAL-ELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLA 292
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQ--- 346
+ + + YN L+K R K +L EM Q G P TY+ ++ + G+
Sbjct: 293 GEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWES 352
Query: 347 --------DAD------------------------ACELLEEMLGRNCHPDAITYEIFIV 374
+AD A +L EM PD Y + I
Sbjct: 353 ARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMID 412
Query: 375 YSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSS 434
+ A + FN+M + G++P + T I + R++ A + +
Sbjct: 413 TFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPP 472
Query: 435 SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
Y+++ +L + + + +LSEM + GL PN+ Y
Sbjct: 473 GTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITY 512
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 55/134 (41%), Gaps = 19/134 (14%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ YNI+I + + ++G +L EM++ G P +TY ++ V ++G+ +A + +E
Sbjct: 474 TTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIE 533
Query: 356 EMLG-------------------RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
M R PD ITY + RV +FD + +M+ G
Sbjct: 534 AMKADGLKPSPTMYHALVNAYAQRGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSG 593
Query: 397 LQPRLATHAAFIKG 410
P A G
Sbjct: 594 CAPDRKARAMLRSG 607
>gi|357122161|ref|XP_003562784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Brachypodium distachyon]
Length = 791
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 80/161 (49%), Gaps = 8/161 (4%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
+L EM Q GC P +TYN ++ K+G +A +L EEM + PD ITY +
Sbjct: 304 VLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVITYTTLVSGLD 363
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS-- 435
R GK D A +N+M++ G +P L T+ A IK + + ++ + +++ D+ +S+
Sbjct: 364 RAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPE----MMIVFDEIRSAGFV 419
Query: 436 --NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ ++ L ++ +N V EM K+G P Y
Sbjct: 420 PDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTY 460
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 4/161 (2%)
Query: 263 SCLVSGVRALIEMFSVLGLY-EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
+ LVSG+ ++ + +G Y EM + K + YN LIK R F + E
Sbjct: 356 TTLVSGLDRAGKIDAAIGTYNEMLRNGCKPN---LCTYNALIKLHGVRGKFPEMMIVFDE 412
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
+R G P +T+N +L V +NG D + + +EM P+ TY I R G
Sbjct: 413 IRSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGL 472
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
FD A + +M++ G+ P ++T+ A + R+E A K
Sbjct: 473 FDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEK 513
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 98/244 (40%), Gaps = 23/244 (9%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
+L++++ Y+ A V+K+ E+ V YN LI + + L EM
Sbjct: 287 SLLDVYGKARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVK 346
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G EP +TY ++ L + G+ A EML C P+ TY I GKF
Sbjct: 347 GIEPDVITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEM 406
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYR----YEDAYKYVVLSADKYKSSSNMLYSL 441
F+++ G P + T + +F + E + + + Y + SL
Sbjct: 407 MIVFDEIRSAGFVPDVVTWNTLLA---VFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSL 463
Query: 442 LAS-----LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSR 496
++S L D+ A + M++ G+ P++S Y VL L + A+ L +
Sbjct: 464 ISSYSRCGLFDQ------AMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAE 517
Query: 497 YSSL 500
+L
Sbjct: 518 MENL 521
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 70/165 (42%), Gaps = 1/165 (0%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L+ MR+ G TYN ++ + +A ++ +EM PD +T +
Sbjct: 234 LVDSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYG 293
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ ++D A +M + G P + T+ + I Y E+A + K +
Sbjct: 294 KARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVI 353
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLH 482
Y+ L S D+ A +EM++NG +PN+ Y ++K LH
Sbjct: 354 TYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIK-LH 397
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 53/126 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ R D + ++L E++ P +YN ++ + GQ +A L EM
Sbjct: 635 YNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLFSEMK 694
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD +TY IF+ F+ A + MV G +P T+ ++ Y R
Sbjct: 695 CSGLVPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTHGCKPNERTYNTILQEYCSHGRIA 754
Query: 419 DAYKYV 424
D ++
Sbjct: 755 DGKSFI 760
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 5/127 (3%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTE----RKVSY-YNILIKEMCRRCDFKGPRDLLVEMRQV 325
+L+ M+S LG E + ++ + + R Y YN +I R+ K L EM+
Sbjct: 637 SLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKCS 696
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P +TYN + N +A +L+ M+ C P+ TY + C G+
Sbjct: 697 GLVPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTHGCKPNERTYNTILQEYCSHGRIADG 756
Query: 386 FNFFNQM 392
+F + +
Sbjct: 757 KSFISNL 763
Score = 38.5 bits (88), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 59/155 (38%), Gaps = 26/155 (16%)
Query: 231 KAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAK--YV 288
++ GF+P +++ L + V Q G VSGV EM K YV
Sbjct: 414 RSAGFVPDVVTWNTL--------LAVFGQNGLDTEVSGV-----------FKEMKKSGYV 454
Query: 289 IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
++ Y LI R F ++ M + G P TYN VL L + G+
Sbjct: 455 PER-----DTYVSLISSYSRCGLFDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWE 509
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
A +L EM + PD ++Y + K D
Sbjct: 510 QAEKLFAEMENLDSRPDELSYSSLLHAYANAKKLD 544
>gi|357465315|ref|XP_003602939.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491987|gb|AES73190.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 2/188 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCE-PITLTYNYVLGVLCKNGQDADACELL 354
V +NIL+K CRR D +++ EMR P +TY+ ++ LC+NG+ +A EL
Sbjct: 273 VCIFNILVKYHCRRGDIDSAFEVVKEMRNSKYSYPNVITYSTLMDGLCRNGRLKEAFELF 332
Query: 355 EEMLGRN-CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
EEM+ ++ PD +TY + I CR GK D A N M G P + ++A + G
Sbjct: 333 EEMVSKDQIVPDPLTYNVLINGFCREGKADRARNVIEFMKNNGCCPNVFNYSALVDGLCK 392
Query: 414 FYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
+ +DA + + Y+ L + +N A +L+EM +N + +
Sbjct: 393 AGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQIDEAIELLTEMKENDCQADTVT 452
Query: 474 YRRVLKHL 481
+ +L L
Sbjct: 453 FNVILGGL 460
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 5/131 (3%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI F G + A+ VI+ + V Y+ L+ +C+ + + +L EM+ G
Sbjct: 351 LINGFCREGKADRARNVIEFMKNNGCCPNVFNYSALVDGLCKAGKLQDAKGVLAEMKSSG 410
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
+P +TY ++ +NGQ +A ELL EM +C D +T+ + + CR G+FD A
Sbjct: 411 LKPDAITYTSLINFFSRNGQIDEAIELLTEMKENDCQADTVTFNVILGGLCREGRFDEAL 470
Query: 387 NFFNQMVKRGL 397
+ ++ ++G+
Sbjct: 471 DMIEKLPQQGV 481
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 57/126 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+LI CR R+++ M+ GC P Y+ ++ LCK G+ DA +L EM
Sbjct: 348 YNVLINGFCREGKADRARNVIEFMKNNGCCPNVFNYSALVDGLCKAGKLQDAKGVLAEMK 407
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PDAITY I + R G+ D A +M + Q T + G R++
Sbjct: 408 SSGLKPDAITYTSLINFFSRNGQIDEAIELLTEMKENDCQADTVTFNVILGGLCREGRFD 467
Query: 419 DAYKYV 424
+A +
Sbjct: 468 EALDMI 473
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 82/189 (43%), Gaps = 5/189 (2%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEM---RQVGCEPITLTYNYVLGVLCKNGQDADACE 352
V Y+ L+ +CR K +L EM Q+ +P LTYN ++ C+ G+ A
Sbjct: 309 VITYSTLMDGLCRNGRLKEAFELFEEMVSKDQIVPDP--LTYNVLINGFCREGKADRARN 366
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
++E M C P+ Y + C+ GK A +M GL+P T+ + I +
Sbjct: 367 VIEFMKNNGCCPNVFNYSALVDGLCKAGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFS 426
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
+ ++A + + + + + ++++ + A +++ ++ + G+ N
Sbjct: 427 RNGQIDEAIELLTEMKENDCQADTVTFNVILGGLCREGRFDEALDMIEKLPQQGVYLNKG 486
Query: 473 VYRRVLKHL 481
YR VL L
Sbjct: 487 SYRIVLNSL 495
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 5/119 (4%)
Query: 280 GLYEMAKYVIKKTERKVSY-----YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
G ++ A +I+K ++ Y Y I++ + + C+ + LL M G P T
Sbjct: 464 GRFDEALDMIEKLPQQGVYLNKGSYRIVLNSLTQNCELRKANKLLGLMLSRGFVPHYATS 523
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
N +L LCK G DA L +++ P ++E+ I CR K F +++V
Sbjct: 524 NELLVRLCKEGMANDAATALFDLVDMGFQPQHDSWELLIDLICRDRKLLYVFELLDELV 582
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 46/102 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N+++ +CR F D++ ++ Q G +Y VL L +N + A +LL ML
Sbjct: 453 FNVILGGLCREGRFDEALDMIEKLPQQGVYLNKGSYRIVLNSLTQNCELRKANKLLGLML 512
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
R P T +V C+ G + A +V G QP+
Sbjct: 513 SRGFVPHYATSNELLVRLCKEGMANDAATALFDLVDMGFQPQ 554
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 72/187 (38%), Gaps = 37/187 (19%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG-RNCHPDAITYEIFIVYS 376
LL R + +P +N ++ C+ G A E+++EM + +P+ ITY +
Sbjct: 260 LLYAKRSLVYKPNVCIFNILVKYHCRRGDIDSAFEVVKEMRNSKYSYPNVITYSTLMDGL 319
Query: 377 CRVGKFDVAFNFFNQMV-KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
CR G+ AF F +MV K + P T+ I G F R A +
Sbjct: 320 CRNGRLKEAFELFEEMVSKDQIVPDPLTYNVLING---FCREGKADR------------- 363
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSS 495
A+NV+ M NG PNV Y ++ L + + AK + +
Sbjct: 364 -------------------ARNVIEFMKNNGCCPNVFNYSALVDGLCKAGKLQDAKGVLA 404
Query: 496 RYSSLSL 502
S L
Sbjct: 405 EMKSSGL 411
>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 88/198 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ +C+ LL EM+ GC P + YN ++ LCK G +L++ M
Sbjct: 225 YCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMF 284
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C P+ +TY I C GK D A + +MV P T+ I G R
Sbjct: 285 LKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAT 344
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA + + ++ + +YS+L S K A ++ +M + G +PN+ VY ++
Sbjct: 345 DAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLV 404
Query: 479 KHLHTSHQEHMAKCLSSR 496
L + + AK + +R
Sbjct: 405 DGLCREGKPNEAKEILNR 422
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 83/181 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+LI +C++ D L+ M GC P +TYN ++ LC G+ A LLE M+
Sbjct: 260 YNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMV 319
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C P+ +TY I + + A + M +RG ++ I G F + E
Sbjct: 320 SSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAE 379
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A A+K + ++YS+L + P AK +L+ M+ +G PN Y ++
Sbjct: 380 EAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLM 439
Query: 479 K 479
K
Sbjct: 440 K 440
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 82/184 (44%), Gaps = 2/184 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI + ++ LL M + G Y+ ++ L K G+ +A L +M
Sbjct: 330 YGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMA 389
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C P+ + Y + + CR GK + A N+M+ G P T+++ +KG+F E
Sbjct: 390 EKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCE 449
Query: 419 DAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+A + V DK S N YS+L A V S+M+ G++P+ Y +
Sbjct: 450 EAVQ-VWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSI 508
Query: 478 LKHL 481
+K L
Sbjct: 509 IKGL 512
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 101/218 (46%), Gaps = 5/218 (2%)
Query: 257 LNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPR 316
LNQ S L+SG+ + + L+ K K + + Y++L+ +CR +
Sbjct: 360 LNQHIYSVLISGLFKEGKAEEAMSLWR--KMAEKGCKPNIVVYSVLVDGLCREGKPNEAK 417
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
++L M GC P TY+ ++ K G +A ++ +EM C + Y + I
Sbjct: 418 EILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGL 477
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK--YVVLSADKYKSS 434
C VG+ A +++M+ G++P +++ IKG + A K + +L ++ KS
Sbjct: 478 CGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQ 537
Query: 435 SNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
+++ Y++L + A ++L+ M+ G P+V
Sbjct: 538 PDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDV 575
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 22/152 (14%)
Query: 258 NQVGGSCLVSGVRALIEMFSVLGLY-EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPR 316
+ V S ++ G+ + M + L LY EM K++ V YNIL+ +C + D
Sbjct: 501 DTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAV 560
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVL------CKNGQD---------------ADACELLE 355
DLL M GC+P +T N L L C G+ + AC ++E
Sbjct: 561 DLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVE 620
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
MLG+ P T+ + + C+ K + A +
Sbjct: 621 VMLGKYLAPKTSTWAMIVREICKPKKINAAID 652
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 4/114 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEM---RQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
Y+ +IK +C L EM + +P +TYN +L LC + A +LL
Sbjct: 505 YSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLN 564
Query: 356 EMLGRNCHPDAITYEIFI-VYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
ML R C PD IT F+ S + D +F ++V R L+ + + A I
Sbjct: 565 SMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTI 618
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 81/202 (40%), Gaps = 35/202 (17%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K E + YN+LI MC D ++L + GC+P +TY VL LC + + +
Sbjct: 315 KGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKE 374
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
ELL EM NC PD +T+ + C+ G D A + M + G + T+++ +
Sbjct: 375 VEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILD 434
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
G R +DA + +LS + G +P
Sbjct: 435 GLCDVGRVDDAVE-----------------------------------LLSRLKSYGCKP 459
Query: 470 NVSVYRRVLKHLHTSHQEHMAK 491
+ Y VLK L ++ Q A+
Sbjct: 460 DTIAYTTVLKGLCSTEQWERAE 481
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 117/299 (39%), Gaps = 23/299 (7%)
Query: 205 CGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVG--- 261
CG + ++ + +LL + +E F + + + L + I VV+ +++ G
Sbjct: 367 CGS-ERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAI-EVVDHMSEHGCVA 424
Query: 262 ----------GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCD 311
G C V V +E+ S L Y I Y ++K +C
Sbjct: 425 DIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIA--------YTTVLKGLCSTEQ 476
Query: 312 FKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEI 371
++ +L+ EM C P +T+N V+ LC+ G A ++E+M C PD +TY
Sbjct: 477 WERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNC 536
Query: 372 FIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKY 431
I C D A + + G +P + T +KG R+EDA + +
Sbjct: 537 IIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSN 596
Query: 432 KSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
+ ++ + + + A L M +NG PN S Y V+ L + + A
Sbjct: 597 CPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAA 655
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 91/228 (39%), Gaps = 2/228 (0%)
Query: 256 VLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTE--RKVSYYNILIKEMCRRCDFK 313
V +G S V ++ + G E A+ +I +N LI+ +C R
Sbjct: 209 VFAALGPSATVVTYNTMVNGYCRAGRIEDARRLINGMPFPPDTFTFNPLIRALCVRGRIP 268
Query: 314 GPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFI 373
+ +M GC P +TY+ +L CK A LL+EM + C PD +TY + I
Sbjct: 269 DALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLI 328
Query: 374 VYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKS 433
C G D A N + + G +P T+ +K R+++ + + +
Sbjct: 329 NAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCA 388
Query: 434 SSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ ++ + + + A V+ M ++G ++ Y +L L
Sbjct: 389 PDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGL 436
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 107/275 (38%), Gaps = 8/275 (2%)
Query: 209 DDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSG 268
+ +E +L+ + +E F + + K L + I RVVE +++ G S +
Sbjct: 475 EQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAI-RVVEQMSENGCSPDIVT 533
Query: 269 VRALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMR 323
+I+ + A ++ + + +N L+K +C ++ L+ M
Sbjct: 534 YNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMM 593
Query: 324 QVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
+ C P LT+N V+ LC+ G A E L+ M C P++ TY I + + GK
Sbjct: 594 RSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQ 653
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
A + M P L T+ I + E+A + + Y LA
Sbjct: 654 AALELLSGMTNG--TPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLA 711
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ + A +L + GL P+ + Y VL
Sbjct: 712 YGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVL 746
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 85/212 (40%), Gaps = 11/212 (5%)
Query: 205 CGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSC 264
CG +D +E QL+ + +E F + + K L + I ++++ + G C
Sbjct: 577 CG-VDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAI-ETLKIMAENG--C 632
Query: 265 LVSG------VRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDL 318
+ + V AL++ E+ + T ++Y N +I + + + DL
Sbjct: 633 VPNSSTYSIVVDALLKAGKAQAALELLSGMTNGTPDLITY-NTVISNLTKAGKMEEALDL 691
Query: 319 LVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCR 378
L M G P T TY + +C+ A +L + PD Y ++ CR
Sbjct: 692 LRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCR 751
Query: 379 VGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ D+A + F MV G P +T+ ++
Sbjct: 752 DRRTDLAIDCFAHMVSSGCMPDESTYVILLEA 783
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 56/135 (41%), Gaps = 5/135 (3%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
S Y+I++ + + + +LL M P +TYN V+ L K G+ +A +LL
Sbjct: 637 STYSIVVDALLKAGKAQAALELLSGM--TNGTPDLITYNTVISNLTKAGKMEEALDLLRV 694
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
M+ PD TY CR D A ++ GL P + + G+ R
Sbjct: 695 MVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRR 754
Query: 417 YE---DAYKYVVLSA 428
+ D + ++V S
Sbjct: 755 TDLAIDCFAHMVSSG 769
>gi|224120112|ref|XP_002331139.1| predicted protein [Populus trichocarpa]
gi|222872867|gb|EEF09998.1| predicted protein [Populus trichocarpa]
Length = 329
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 1/152 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y LI C+ +F + L EM++ G EP +TYN ++ K G+ +A EL +
Sbjct: 176 VVSYTTLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRD 235
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM + PD TY + C GK D A FN++ ++GL + T+ A I G
Sbjct: 236 EMRAKGIFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISGLSKEG 295
Query: 416 RYEDAYK-YVVLSADKYKSSSNMLYSLLASLH 446
R E+A+K Y ++ + SL++SLH
Sbjct: 296 RSEEAFKLYDEMTEAGLTPDDRVYTSLVSSLH 327
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 79/185 (42%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K + + Y ++I C+ + K L E+ + G TY ++ +CK G+
Sbjct: 30 KGIKADIHVYTVVINWNCKIGNTKRAFALFDELTEKGLVANVHTYGALIDGVCKAGEMEA 89
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A L+ EM R + + Y I C+ G D AF M K+G + + T
Sbjct: 90 AEILVNEMQTRGLDVNQLIYNTLIDGYCKRGLIDEAFKVQVIMEKKGFENDIYTLNTIAD 149
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
G + E+A ++++ +K + + Y+ L ++ K N V AK + EM K G P
Sbjct: 150 GLRKLNQPEEAKRWLLTMIEKGVVPNVVSYTTLIDIYCKEGNFVEAKKLFQEMKKAGGEP 209
Query: 470 NVSVY 474
N Y
Sbjct: 210 NAVTY 214
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 77/185 (41%), Gaps = 4/185 (2%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V+ Y +LI + EM + G + Y V+ CK G A L +
Sbjct: 1 VATYTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFD 60
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
E+ + + TY I C+ G+ + A N+M RGL + I GY
Sbjct: 61 ELTEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRG 120
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSL--LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
++A+K V+ + K N +Y+L +A K N P AK L M++ G+ PNV
Sbjct: 121 LIDEAFKVQVIM--EKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVS 178
Query: 474 YRRVL 478
Y ++
Sbjct: 179 YTTLI 183
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 114/302 (37%), Gaps = 75/302 (24%)
Query: 199 SLVID---NCGRLDDYETM------RQLLNDFNVYQVCLN--------EKAFGFLPVLIS 241
+L+ID + G++D+ E M + + D +VY V +N ++AF
Sbjct: 5 TLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFD---- 60
Query: 242 SKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----V 296
LT+KG+ V N L+ GV EM E A+ ++ + + +
Sbjct: 61 --ELTEKGL-----VANVHTYGALIDGVCKAGEM-------EAAEILVNEMQTRGLDVNQ 106
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
YN LI C+R + V M + G E T N + L K Q +A L
Sbjct: 107 LIYNTLIDGYCKRGLIDEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLT 166
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
M+ + P+ ++Y I C+ G F A F +M K G +P T+ I G+ R
Sbjct: 167 MIEKGVVPNVVSYTTLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGR 226
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
++AY+ L D EM G+ P++ Y
Sbjct: 227 MKEAYE----------------------LRD-------------EMRAKGIFPDIYTYTS 251
Query: 477 VL 478
+L
Sbjct: 252 LL 253
>gi|224068054|ref|XP_002302657.1| predicted protein [Populus trichocarpa]
gi|222844383|gb|EEE81930.1| predicted protein [Populus trichocarpa]
Length = 602
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 87/184 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ ++ L+ C+ + +LV+MR+ G EP + YN +L G+ DA +LL+
Sbjct: 220 LKHFTCLLYGWCKEGKLLEAKHVLVQMREAGFEPDIVVYNNLLSGYATAGKMGDAFDLLK 279
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
E+ + C P+A +Y I I C K D A F +M + G + T+ A + G+ +
Sbjct: 280 EIRRKGCDPNATSYTILIQALCGQEKMDEAMRVFVEMERSGCDADVVTYTALVSGFCKWR 339
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ Y+ + K + + Y L H+K K ++ EM K G P++S+Y
Sbjct: 340 MIDKGYQILQSMIQKGHMPNQLTYLHLMLAHEKKEELEECKELMGEMQKIGCIPDLSIYN 399
Query: 476 RVLK 479
V++
Sbjct: 400 VVIR 403
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 66/158 (41%), Gaps = 1/158 (0%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
++L EM + GCEP + +L LCKNG +A L E+M R P + +
Sbjct: 172 EVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVR-FSPSLKHFTCLLYGW 230
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
C+ GK A + QM + G +P + + + GY + DA+ + K +
Sbjct: 231 CKEGKLLEAKHVLVQMREAGFEPDIVVYNNLLSGYATAGKMGDAFDLLKEIRRKGCDPNA 290
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
Y++L A V EM ++G +V Y
Sbjct: 291 TSYTILIQALCGQEKMDEAMRVFVEMERSGCDADVVTY 328
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 98/250 (39%), Gaps = 52/250 (20%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
L+ ++ G A ++K+ RK + Y ILI+ +C + + VEM + G
Sbjct: 261 LLSGYATAGKMGDAFDLLKEIRRKGCDPNATSYTILIQALCGQEKMDEAMRVFVEMERSG 320
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN------------------------- 361
C+ +TY ++ CK ++L+ M+ +
Sbjct: 321 CDADVVTYTALVSGFCKWRMIDKGYQILQSMIQKGHMPNQLTYLHLMLAHEKKEELEECK 380
Query: 362 ----------CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
C PD Y + I +C++G+ + + +N+M GL P L T I G+
Sbjct: 381 ELMGEMQKIGCIPDLSIYNVVIRLACKLGEVNAGVDAWNEMEVSGLSPGLDTFVIMINGF 440
Query: 412 FIFYRYEDAYKYV-------VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMK 464
+A +Y +LS+ +Y ++L +LL + +AK++ S ++
Sbjct: 441 LGHGYLVEACQYFKEMVERGLLSSRQYGILKDLLNALL-----RGEKLELAKDLWSCIVT 495
Query: 465 NGLRPNVSVY 474
G NV +
Sbjct: 496 KGCELNVDSW 505
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 5/208 (2%)
Query: 272 LIEMFSVLG-----LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI FS LG A + K E LIK +C + ++ +G
Sbjct: 97 LINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALG 156
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
+ Y ++ LCK GQ + A +LL + G+ P+ + Y I C+V + AF
Sbjct: 157 FHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAF 216
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
+ +++MV +G+ P + T++A I G+ I + DA + + +S+L
Sbjct: 217 DLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGF 276
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
K AKNVL+ MMK G++P+V Y
Sbjct: 277 CKEGRVKEAKNVLAMMMKQGIKPDVVTY 304
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 108/252 (42%), Gaps = 13/252 (5%)
Query: 245 LTKKGIW-RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILI 303
+ K+GI VV + + G CLV V +F+ MA+ V YNI+I
Sbjct: 292 MMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNT-----MAQ---GGVTANVQSYNIMI 343
Query: 304 KEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH 363
C+ +L EM P +TYN ++ LCK+G+ + A +L++EM R
Sbjct: 344 NGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVP 403
Query: 364 PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY 423
D ITY + C+ + D A +M G+QP + T+ I G R +DA
Sbjct: 404 HDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQN- 462
Query: 424 VVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNV--LSEMMKNGLRPNVSVYRRVLKHL 481
+ K + +Y+ + +N + K + LS+M NG PN Y ++ L
Sbjct: 463 -IFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSL 521
Query: 482 HTSHQEHMAKCL 493
+ MA+ L
Sbjct: 522 FEKDENDMAEKL 533
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 2/225 (0%)
Query: 257 LNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPR 316
LN+V L++G+ + + + L L + + K + V YN +I MC+
Sbjct: 159 LNKVCYGTLINGLCKVGQTSAALQL--LRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAF 216
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
DL EM G P +TY+ ++ C G+ DA L +M+ +PD T+ I +
Sbjct: 217 DLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGF 276
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
C+ G+ A N M+K+G++P + T+ + + GY + + A A +++
Sbjct: 277 CKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANV 336
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y+++ + K A N+ EM + P+V Y ++ L
Sbjct: 337 QSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGL 381
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 78/173 (45%), Gaps = 2/173 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI +C+ L+ EM G +TYN +L LCKN Q A LL
Sbjct: 371 VVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLT 430
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M PD TY I I C+ G+ A N F ++ +G + T+ I+G+
Sbjct: 431 KMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDND 490
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLA-SLHDKNNNPVMAKNVLSEMMKNGL 467
++ A + D + Y ++ SL +K+ N MA+ +L EM+ GL
Sbjct: 491 LFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDEND-MAEKLLREMIARGL 542
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 97/219 (44%), Gaps = 2/219 (0%)
Query: 263 SCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
S L+SG L ++ +GL+ K + ++ V ++IL+ C+ K +++L M
Sbjct: 235 SALISGFCILGKLNDAIGLFN--KMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMM 292
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
+ G +P +TY ++ C Q A + M + +Y I I C++ K
Sbjct: 293 MKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKV 352
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
D A N F +M + + P + T+ + I G + A K V D+ + Y+ +
Sbjct: 353 DEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSI 412
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
KN+ A +L++M G++P++ Y ++ L
Sbjct: 413 LDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGL 451
>gi|357500061|ref|XP_003620319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495334|gb|AES76537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 496
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 112/252 (44%), Gaps = 11/252 (4%)
Query: 244 ALTKKGIW-RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNIL 302
A+ KKG VV + + G CLV V +F+ MA+ + + YNIL
Sbjct: 244 AMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFN-----NMAQGGVNP---DIQSYNIL 295
Query: 303 IKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNC 362
I C+ +L EM P +TYN ++ LCK+G+ + A +L++EM R
Sbjct: 296 INGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQ 355
Query: 363 HPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
PD ITY + C+ D A ++ +GLQP + T+ I G R EDA
Sbjct: 356 PPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQN 415
Query: 423 -YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ L Y + N Y+++ + N A +LS+M +NG PN Y +++ L
Sbjct: 416 IFEDLLVKGYNINVNT-YTVMIHVFCNNGMFGEALAMLSKMEENGCIPNAVTYEIIIRSL 474
Query: 482 HTSHQEHMAKCL 493
+ A+ L
Sbjct: 475 FDKDENDKAEKL 486
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 78/179 (43%)
Query: 303 IKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNC 362
+ C+ K +++ M + G +P +TY+ ++ C + A + M
Sbjct: 226 VSTFCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGV 285
Query: 363 HPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
+PD +Y I I C++ D A N F +M R + P + T+ + I G + A K
Sbjct: 286 NPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALK 345
Query: 423 YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
V D+ + + YS L KN+ A +L+++ GL+PN+ Y ++ L
Sbjct: 346 LVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGL 404
>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
Length = 556
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 115/249 (46%), Gaps = 20/249 (8%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
G C V +E+ + L A VI YN +I +C ++L
Sbjct: 179 GICKDGDVEEALEILDGMKLAGPAPDVIT--------YNSIIHALCVAGRVVEAAEIL-- 228
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
+ + C P +T+N +L CK G A E+LEEM N PD ITY I + CRVG+
Sbjct: 229 -KTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQ 287
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV-VLSADKYKS---SSNM 437
VAF ++V++G P + + + + G E+A+K V +SA + + S NM
Sbjct: 288 VQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINM 347
Query: 438 L-----YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKC 492
+ Y+++ K+ + A +++S+++ G P+V Y ++ L +++ A
Sbjct: 348 VPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACD 407
Query: 493 LSSRYSSLS 501
L+ +SL
Sbjct: 408 LADEMASLG 416
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 14/214 (6%)
Query: 279 LGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFK---------GPRDLLVEMRQ 324
+G ++A Y++++ R+ V Y L+ +C+ + + R++L EM
Sbjct: 285 VGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVS 344
Query: 325 VGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
+ P TYN VLG L K+G + A L+ +++ R PD +TY I C+ +
Sbjct: 345 INMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVRE 404
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLAS 444
A + ++M G P T + + G R +DA+ VV + K + + ++Y+ L
Sbjct: 405 ACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLID 464
Query: 445 LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
K++ A VL M G+ + YR+++
Sbjct: 465 GLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLI 498
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%)
Query: 306 MCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPD 365
+CR L+VEM + P + Y ++ LCK+ + DAC +L+ M G+ D
Sbjct: 431 LCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALD 490
Query: 366 AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
Y IV G+ A +++MV RG P +T
Sbjct: 491 DFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGST 528
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 68/148 (45%), Gaps = 2/148 (1%)
Query: 333 TYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
+YN++L +L K+G ++ +++L C P+ +T++I I +C+ G+ A F +
Sbjct: 29 SYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRALEFLRAL 88
Query: 393 VKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNP 452
+ + P + I G F + A K + Y+ + S K+ N
Sbjct: 89 DEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNL 148
Query: 453 VMAKNVLSEMMKNGLR--PNVSVYRRVL 478
A+ +L EM++ G + P++ Y ++
Sbjct: 149 EKARELLEEMIRRGGKSAPDIVTYNTLI 176
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 2/112 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ ILI+ C+ + L + + P +N+++ L K+G A +L E M
Sbjct: 65 FKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENME 124
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ--PRLATHAAFI 408
+PD TY I C+ G + A +M++RG + P + T+ I
Sbjct: 125 SSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLI 176
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 106/238 (44%), Gaps = 14/238 (5%)
Query: 272 LIEMFSVLGLYE---MAKYVIKKTERKVSYYNI--LIKEMC--RRCDFKGPRDLLVEMRQ 324
LI F +G E A +I KT +V+ I L+K +C +R D + LL+ M +
Sbjct: 96 LIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVD-EATDILLLRMSE 154
Query: 325 VGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
GC P + YN V+ + GQ A L EM+ + P+ +TY I C+ D
Sbjct: 155 FGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDR 214
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLAS 444
A F QM+ RG++P T+ I GY ++++ + + + + Y+LL
Sbjct: 215 AKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLD 274
Query: 445 LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSL 502
KN A+ M + G++P+V++Y +L H LS +S L L
Sbjct: 275 YLCKNGRCREARLFFDSMFRKGIKPDVAIYAILL------HGYATKGALSEMHSFLDL 326
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 88/186 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y +I +C+ + + +M G +P TYN ++ G+ + ++LE
Sbjct: 196 VVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLE 255
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM PD ITY + + Y C+ G+ A FF+ M ++G++P +A +A + GY
Sbjct: 256 EMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKG 315
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ + ++ L S + +++++ + K A ++ ++M + GL P+V +
Sbjct: 316 ALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFG 375
Query: 476 RVLKHL 481
++ L
Sbjct: 376 ALIDAL 381
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 64/123 (52%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++N L+ +C + L+ M +VG P ++YN ++ C G+ +A +LL+ M
Sbjct: 443 FFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVM 502
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
+ P+ TY I + C+ + D A++ F +M+ +G+ P +AT+ + G F R+
Sbjct: 503 VSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRF 562
Query: 418 EDA 420
+A
Sbjct: 563 SEA 565
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 87/198 (43%), Gaps = 6/198 (3%)
Query: 229 NEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMA--- 285
N + F + + KA+ ++ + + + Q G S V ALI+ LG + A
Sbjct: 335 NRRIFNIMFCAYAKKAMIEEAM-HIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQ 393
Query: 286 --KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
+ + + + ++ L+ +C ++ +L E+ G + +N ++ LC
Sbjct: 394 FNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCN 453
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
G+ +A L++ M+ P+ I+Y + C G+ D A + MV GL+P T
Sbjct: 454 EGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFT 513
Query: 404 HAAFIKGYFIFYRYEDAY 421
+ ++GY R +DAY
Sbjct: 514 YTILLRGYCKARRVDDAY 531
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 82/206 (39%), Gaps = 1/206 (0%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K + V+ Y IL+ + L M G P +N + K +
Sbjct: 295 KGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEE 354
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A + +M + PD +++ I C++G+ D A FNQM+ G+ P + ++ +
Sbjct: 355 AMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVY 414
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
G ++E A + D+ + ++ L + A+ ++ M++ G+RP
Sbjct: 415 GLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRP 474
Query: 470 NVSVYRR-VLKHLHTSHQEHMAKCLS 494
NV Y V H T + AK L
Sbjct: 475 NVISYNTLVAGHCLTGRIDEAAKLLD 500
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 1/129 (0%)
Query: 364 PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY 423
P+A TY I I CR+G+ + F F ++K G + + + +KG R ++A
Sbjct: 88 PNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDI 147
Query: 424 VVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLH 482
++L ++ +++ Y+ + + + A N+ EMM G+ PNV Y V+ L
Sbjct: 148 LLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLC 207
Query: 483 TSHQEHMAK 491
+ AK
Sbjct: 208 KAQVVDRAK 216
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 71/154 (46%), Gaps = 26/154 (16%)
Query: 265 LVSGVRALIEMFSVL--GLYEMAKY----------VIKKTERKVSYYNILIKEMCRRC-- 310
L+ GV ++ ++ + GL++ ++ + +T+ + YNI++ +C+
Sbjct: 538 LMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFV 597
Query: 311 --DFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAIT 368
FK R L + Q+ ++T+N ++G L K G+ DA +L + PD +T
Sbjct: 598 DEAFKMFRRLCSKDPQLD----SVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVT 653
Query: 369 YEIF---IVYSCRVGKFDVAFNFFNQMVKRGLQP 399
Y + ++ +G+FD F+ M K G P
Sbjct: 654 YRLIAENLIEEGSLGEFD---GLFSAMEKSGTAP 684
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 55/119 (46%)
Query: 286 KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNG 345
+ ++K V+ YN ++ + + F +L + M + TYN +L LCKN
Sbjct: 536 EMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNN 595
Query: 346 QDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
+A ++ + ++ D++T+ I I + G+ + A + F + GL P + T+
Sbjct: 596 FVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTY 654
>gi|302758538|ref|XP_002962692.1| hypothetical protein SELMODRAFT_62267 [Selaginella moellendorffii]
gi|300169553|gb|EFJ36155.1| hypothetical protein SELMODRAFT_62267 [Selaginella moellendorffii]
Length = 495
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 72/125 (57%), Gaps = 2/125 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY-NYVLGVLCKNGQDADACELLEEM 357
YN+L+ + ++ + R++ +EM++ GCEP +TY Y+LG LCK G+ DA + +EM
Sbjct: 128 YNVLLTGLKKKDRVEEMREMFLEMKEKGCEPNLVTYCTYILG-LCKAGRVDDAMVVKKEM 186
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
+ ++C PD + Y I I C+VGK +M+++ LQP + ++ + RY
Sbjct: 187 IQKSCSPDNVVYSILINAFCKVGKIYEGEKLLAEMLEKKLQPDVVCFSSLVDCLDKAGRY 246
Query: 418 EDAYK 422
DAY+
Sbjct: 247 GDAYR 251
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 66/153 (43%)
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
GC P T YN +L L K + + E+ EM + C P+ +TY +I+ C+ G+ D A
Sbjct: 120 GCPPNTYAYNVLLTGLKKKDRVEEMREMFLEMKEKGCEPNLVTYCTYILGLCKAGRVDDA 179
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
+M+++ P ++ I + + + K + +K + +S L
Sbjct: 180 MVVKKEMIQKSCSPDNVVYSILINAFCKVGKIYEGEKLLAEMLEKKLQPDVVCFSSLVDC 239
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DK A + MM+ G +P+ + +L
Sbjct: 240 LDKAGRYGDAYRLFRRMMEQGCKPDAVIASVIL 272
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 56/148 (37%), Gaps = 36/148 (24%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITL-------------------------- 332
Y L++E+CRR + +L+ EMR G + L
Sbjct: 339 YATLLRELCRRKNAVEALELVKEMRAAGYTSVDLSCVIEMLCKMKMVDEARGLYEEMKSS 398
Query: 333 ----------TYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
TYN +L LC G+ DA +L +EM+ PD +YEI + C+ GK
Sbjct: 399 QQQELLPSVSTYNILLERLCGEGRLGDAKDLFQEMIESGRIPDVNSYEILVEALCKAGKI 458
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKG 410
F Q++ G P A + G
Sbjct: 459 FQGHELFKQLISLGFIPSSEMCATIVDG 486
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 69/159 (43%), Gaps = 2/159 (1%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
+L EM++ P TY ++ L ++ + +A +L +E+ R A +Y +
Sbjct: 5 VLREMQKRNVVPELATYLMLIEGLGRDHRVKEAFDLFQEIHARGFTAKASSYSYIVCGLA 64
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI-FYRYEDAYKYVVLSADKYKSSSN 436
+ G FD A F +M++R + P L + + GY + E A + +Y N
Sbjct: 65 KYGYFDEAVELFEEMIRRKVAPPLGSCIGILNGYCQDGGKMEQAIQLFRKMEGEYGCPPN 124
Query: 437 M-LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
Y++L + K + + + EM + G PN+ Y
Sbjct: 125 TYAYNVLLTGLKKKDRVEEMREMFLEMKEKGCEPNLVTY 163
>gi|255660822|gb|ACU25580.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 418
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 84/183 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ L EM G P +T+ ++ CKNG+ A E+
Sbjct: 206 VYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYR 265
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G A + ++M +GL+P T+ I G
Sbjct: 266 QMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEG 325
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A++Y + ++ Y+ L S + V A+ +L EM+ GL+P + Y
Sbjct: 326 DLETAFEYRKRMIKENIRLDDVAYTALISXLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 385
Query: 476 RVL 478
++
Sbjct: 386 MII 388
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 75/181 (41%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ C+ + + + + + G P +++N ++ K G + L M
Sbjct: 138 FFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVM 197
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
PD TY + I C+ K D A F++M+ GL P T I G+ R
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTFTTLIDGHCKNGRV 257
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ A + + + Y+ L K + A++++ EM GL+P+ Y +
Sbjct: 258 DLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTL 317
Query: 478 L 478
+
Sbjct: 318 I 318
>gi|302143622|emb|CBI22375.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 100/235 (42%), Gaps = 6/235 (2%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEM 306
RV+E+L + V A+I F + E A V+ + + + + YNI+I +
Sbjct: 124 RVMEIL-ESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSL 182
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
C R +L ++ C P +TY ++ G +A +LLEEML R PD
Sbjct: 183 CNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDM 242
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
TY I C+ G +D +M RG +P T++ I F R ++A + +
Sbjct: 243 YTYNAIIRGMCKEGMWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKV 302
Query: 427 SADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+K + Y L S K +A ++ M+ NG P++ Y +L L
Sbjct: 303 MIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAAL 357
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 69/172 (40%), Gaps = 30/172 (17%)
Query: 232 AFGFLPVLISSKALT----KKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKY 287
A G LP + + A+ K+G+W G + + EMFS
Sbjct: 235 ARGLLPDMYTYNAIIRGMCKEGMWD--------------EGEKLVAEMFS---------- 270
Query: 288 VIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQD 347
+ E Y+ILI +CR +L M + P T +Y+ ++ LCK G+
Sbjct: 271 --RGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRL 328
Query: 348 ADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
A +++ M+ C PD + Y + C+ G + A FN++ G P
Sbjct: 329 DLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPP 380
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
SC+ GKF+ + F +V +G P + IKG+F F E A + V+ + +
Sbjct: 78 SCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASR-VMEILESHTEPD 136
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y+ + S K N A VL+ M G P++ Y ++ L
Sbjct: 137 VFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSL 182
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 95/219 (43%), Gaps = 8/219 (3%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+G C + + ++ +GL + E + YN++I +CR + +L
Sbjct: 245 IGAYCKLKRIDEAFKLLRSMGL--------EGLEPNLLTYNMVINGLCRVGRIEETSGVL 296
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
EM + G P +TYN ++ CK G A L EML PD +TY I C+
Sbjct: 297 AEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKA 356
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
G + A FF+QM RGL+P T+ + I G+ ++AY+ + + Y
Sbjct: 357 GNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTY 416
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ L + H + A +L M GL P+V Y ++
Sbjct: 417 NALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTII 455
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 25/262 (9%)
Query: 251 WRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKE 305
+R+ + + + G + AL+ V G E A +++ E K V Y+ +I
Sbjct: 398 YRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAG 457
Query: 306 MCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPD 365
CR + + EM + G P +TY+ ++ LC+ + +AC+L +EML ++ PD
Sbjct: 458 FCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPD 517
Query: 366 AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV 425
TY I C+ G + A N ++M+K+G P T+ I G R +A + ++
Sbjct: 518 EFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLL 577
Query: 426 -LSADKYKSSSNMLYSLLASLHDKNNNPVM--------------AKNVLSEMMKNGLRPN 470
L D+ + +L+ S D V+ A V M+K +PN
Sbjct: 578 KLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPN 637
Query: 471 VSVYRRVLKHLH----TSHQEH 488
+VY V+ H H H+ H
Sbjct: 638 EAVY-NVIIHGHCRDGNVHKAH 658
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 80/173 (46%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
EM + G P +TYN +L C +G+ +A LL M G+ PD ++Y I CR
Sbjct: 403 EMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQ 462
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+ D AF +MV++G+ P T+++ I+G R +A +K Y+
Sbjct: 463 ELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYT 522
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
L + + K + A N+ EM+K G P+ Y ++ L+ + AK L
Sbjct: 523 SLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRL 575
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 6/183 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNILI+ C + + EM + C P +TYN V+G CK + +A +LL M
Sbjct: 206 YNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMG 265
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ +TY + I CRVG+ + +M ++G P T+ + GY +
Sbjct: 266 LEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFH 325
Query: 419 DAYKYVVLSADKYKSS---SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
A +VL ++ ++ + Y+ L + K N A +M GLRPN Y
Sbjct: 326 QA---LVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYT 382
Query: 476 RVL 478
++
Sbjct: 383 SLI 385
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 73/186 (39%), Gaps = 15/186 (8%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV---------------LCK 343
YN+LI + ++ + + LL+++ P +TY+ ++ C
Sbjct: 556 YNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCM 615
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
G +A ++ E M+ RN P+ Y + I CR G A + +MV G P T
Sbjct: 616 KGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVT 675
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
A +K + E + K S L L ++ K N N+L+EM
Sbjct: 676 IIALVKALYSEGMDEQLNLVIRDILRSCKLSDAELSKALVQINHKEGNIDAVFNLLTEMA 735
Query: 464 KNGLRP 469
K+G P
Sbjct: 736 KDGFLP 741
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 63/143 (44%), Gaps = 7/143 (4%)
Query: 269 VRALIEMFSVLGLYEMAKYV----IKKTER-KVSYYNILIKEMCRRCDFKGPRDLLVEMR 323
V ALI+ F + GL A V IK+ ++ + YN++I CR + L EM
Sbjct: 606 VVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMV 665
Query: 324 QVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH-PDAITYEIFIVYSCRVGKF 382
G P T+T ++ L G D ++ ++L R+C DA + + + + G
Sbjct: 666 DFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDIL-RSCKLSDAELSKALVQINHKEGNI 724
Query: 383 DVAFNFFNQMVKRGLQPRLATHA 405
D FN +M K G P A A
Sbjct: 725 DAVFNLLTEMAKDGFLPSGAAPA 747
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 68/172 (39%), Gaps = 1/172 (0%)
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACE-LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
G P L+YN +L + + + E + EM+ + +Y I I C G ++
Sbjct: 162 GFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEM 221
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLAS 444
FF +M + P + T+ I Y R ++A+K + + + + Y+++ +
Sbjct: 222 GLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVIN 281
Query: 445 LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSR 496
+ VL+EM + G P+ Y ++ H A L S
Sbjct: 282 GLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSE 333
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 3/198 (1%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
+I M D G D +R +GC+P +TY ++ + + +A +LLEEM R
Sbjct: 31 IITAMANAGDLDGAMD---HLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERG 87
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
C P+ +TY + + C++ A + +M++ G P + T + + G+ +DA
Sbjct: 88 CPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDAR 147
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K + + K + + YS L K+ + AK VL EM +G+ P+ Y ++ L
Sbjct: 148 KLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGL 207
Query: 482 HTSHQEHMAKCLSSRYSS 499
+ + A+ + R +
Sbjct: 208 CKADKIEEAEQMLRRMAG 225
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 5/216 (2%)
Query: 271 ALIEMFS-VLGLYEMAKYVIKKTER----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI F+ L E K + + ER + YN+L+ +C+ +D++ +M +
Sbjct: 62 ALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEG 121
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P +T+N ++ CK G DA +LL M+ + P+ +TY I C+ KF A
Sbjct: 122 GFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEA 181
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
+M G+ P T++A I G + E+A + + A + ++YS +
Sbjct: 182 KEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHA 241
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K+ + A+ L EM K P+V Y V+ L
Sbjct: 242 FCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGL 277
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 87/185 (47%), Gaps = 4/185 (2%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y LI R + LL EMR+ GC P +TYN ++ LCK A ++++
Sbjct: 57 VVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVK 116
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M+ P+ +T+ + C+ G D A MV +G++P + T++A I G
Sbjct: 117 KMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQ 176
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHD--KNNNPVMAKNVLSEMMKNGLRPNVSV 473
++ +A + VL K + ++ A +H K + A+ +L M +G P+V V
Sbjct: 177 KFLEAKE--VLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVV 234
Query: 474 YRRVL 478
Y ++
Sbjct: 235 YSSII 239
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 6/216 (2%)
Query: 272 LIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
L++ L + A+ V+KK V +N L+ C+R + R LL M G
Sbjct: 98 LVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKG 157
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
P +TY+ ++ LCK+ + +A E+LEEM PDA TY I C+ K + A
Sbjct: 158 MRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAE 217
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
+M G P + +++ I + + +A K + + KS + Y+ +
Sbjct: 218 QMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGL 277
Query: 447 DKNNNPVMAKNVLSEMMKNG-LRPNVSVYRRVLKHL 481
K A+ +L +M ++G + P+V Y V+ L
Sbjct: 278 CKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGL 313
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 92/203 (45%), Gaps = 3/203 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ +I C+ + L EMR+ P +TYN V+ LCK G+ A+A +L+
Sbjct: 232 VVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILD 291
Query: 356 EML-GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
+M + PD +TY I C+ A ++M K G P + T+ I G
Sbjct: 292 QMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKC 351
Query: 415 YRYEDAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
R E+A +Y++ + + N++ Y+ L S K A+ V+ EM G PN+
Sbjct: 352 GRLEEA-EYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVT 410
Query: 474 YRRVLKHLHTSHQEHMAKCLSSR 496
Y ++ L S + A+ L R
Sbjct: 411 YNTMVNGLCVSGRIKEAQQLVQR 433
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 4/145 (2%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG-CEPITLTYNYVLG 339
L EM K ++ V YN +I +C+ + +L +M++ G P +TY+ V+
Sbjct: 255 LQEMRK---QRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVIN 311
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
LCK+ +A +LL+ M C+PD +TY I C+ G+ + A M + G P
Sbjct: 312 GLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAP 371
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYV 424
+ T+ I G + ++A + +
Sbjct: 372 NVVTYTTLISGLCKARKVDEAERVM 396
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 3/133 (2%)
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
C G A ELLEEM PDA T+ I G D A + M G P +
Sbjct: 1 CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNV 57
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
T+ A I + + E+A K + ++ + + Y++L K + A++V+ +
Sbjct: 58 VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117
Query: 462 MMKNGLRPNVSVY 474
M++ G PNV +
Sbjct: 118 MIEGGFAPNVMTF 130
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y +I +C+ + LL M++ GC P +TY ++ LCK + +A ++E
Sbjct: 338 VVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVME 397
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
EM C P+ +TY + C G+ A +M
Sbjct: 398 EMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRM 434
>gi|449485877|ref|XP_004157297.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g07740, mitochondrial-like [Cucumis sativus]
Length = 460
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 89/188 (47%)
Query: 294 RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACEL 353
R + +N+L+ + F ++ + ++G P +++YN ++ K G AC L
Sbjct: 149 RTLQSFNVLLNTLVDCDQFSKASEIFQQAYEMGFRPNSVSYNIMIKGWIKKGGWEQACNL 208
Query: 354 LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
+EML + P +TY + CR G+ D A F M ++G P T+A ++G+
Sbjct: 209 FDEMLEKGVQPSVVTYNSXLGVLCRKGEMDTALCLFKNMTEKGHHPNAVTYALLMEGWCF 268
Query: 414 FYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
+Y++A K + + Y +L + K N +++L+EM K L+P+V
Sbjct: 269 IGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHLGKTGNIDEMESLLNEMKKRRLKPDVVT 328
Query: 474 YRRVLKHL 481
Y ++ +L
Sbjct: 329 YNILVNYL 336
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTE------RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
L+E + +G Y+ AK ++ E R V+Y +L+ + + + LL EM++
Sbjct: 262 LMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNY-GVLMTHLGKTGNIDEMESLLNEMKKR 320
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
+P +TYN ++ LCK G+ DA ++L +M C P+A TY + I C G FD A
Sbjct: 321 RLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDPNAATYRMMIDGYCNAGDFDGA 380
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKG 410
N M+ G P L T A+ + G
Sbjct: 381 MKILNAMLMSGHYPHLKTFASLVVG 405
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 83/191 (43%), Gaps = 3/191 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +L++ C +K + L+ +M GC+ + Y ++ L K G + LL EM
Sbjct: 259 YALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHLGKTGNIDEMESLLNEMK 318
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R PD +TY I + Y C+ GK A+ +M G P AT+ I GY ++
Sbjct: 319 KRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDPNAATYRMMIDGYCNAGDFD 378
Query: 419 DAYKYV--VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
A K + +L + Y SL+ L NN VL EM K LR + +R
Sbjct: 379 GAMKILNAMLMSGHYPHLKT-FASLVVGLLKGENNDDYVCFVLEEMEKRQLRFDAETWRI 437
Query: 477 VLKHLHTSHQE 487
++ + H E
Sbjct: 438 LIMDVCGQHVE 448
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 90/211 (42%), Gaps = 35/211 (16%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNI+IK ++ ++ +L EM + G +P +TYN LGVLC+ G+ A L + M
Sbjct: 189 YNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSXLGVLCRKGEMDTALCLFKNMT 248
Query: 359 GRNCHPDAITYEIFIVYSCRVGK--------FDVAFN----------------------- 387
+ HP+A+TY + + C +GK FD+ F+
Sbjct: 249 EKGHHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHLGKTGNID 308
Query: 388 ----FFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
N+M KR L+P + T+ + + DAYK +V + Y ++
Sbjct: 309 EMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDPNAATYRMMI 368
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + A +L+ M+ +G P++ +
Sbjct: 369 DGYCNAGDFDGAMKILNAMLMSGHYPHLKTF 399
>gi|255660840|gb|ACU25589.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 418
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 84/183 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ L EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 206 VYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLDLAMEIYK 265
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML + PD ITY I C+ G A + ++M +GL+P T+ I G
Sbjct: 266 QMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLIDGSCKEG 325
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A++Y + ++ Y+ L S K V A+ +L EM+ GL+P+ Y
Sbjct: 326 DLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLREMLSVGLKPDTGTYT 385
Query: 476 RVL 478
V+
Sbjct: 386 IVM 388
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 77/181 (42%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ C+ + + + + + + G P +++N ++ K G + L M
Sbjct: 138 FFNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKSAM 197
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
PD TY + I C+ K D A F++M+ RGL P T I G+ +
Sbjct: 198 HASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKL 257
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ A + + S + Y+ L K + AK++ EM GL+P+ Y +
Sbjct: 258 DLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTL 317
Query: 478 L 478
+
Sbjct: 318 I 318
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 52/140 (37%), Gaps = 35/140 (25%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL-------------------- 338
YN LI +C++ D +DL EM G +P +TY ++
Sbjct: 279 YNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMI 338
Query: 339 ---------------GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
LCK G+ DA ++L EML PD TY I + C+ G
Sbjct: 339 KENIRLDDVSYTALISGLCKEGRSVDAEKMLREMLSVGLKPDTGTYTIVMHEFCKNGDVK 398
Query: 384 VAFNFFNQMVKRGLQPRLAT 403
+ +M + G P + T
Sbjct: 399 MGSKLLKEMQRDGHVPCVIT 418
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 67/165 (40%)
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
+N ++ CK G+ A + + + P +++ + ++G D F + M
Sbjct: 139 FNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKSAMH 198
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPV 453
G+QP + T++ I G + ++A+K D+ + + ++ L H KN
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLD 258
Query: 454 MAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYS 498
+A + +M+ G P+ Y ++ L AK L S
Sbjct: 259 LAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMS 303
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 94/216 (43%), Gaps = 14/216 (6%)
Query: 280 GLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
G+ E A +IKK V YN ++ +C+ + L EM ++GC P ++
Sbjct: 407 GMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSH 466
Query: 335 NYVLGVLCKNGQDADACE---------LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
N ++ LC+ + AC+ LL+ M PD +TY I C + + D A
Sbjct: 467 NTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDA 526
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
+ MVKR +P + T I G R ++A + + +S + Y+ L
Sbjct: 527 RHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHG 586
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
H + A+ +LS+M+ GL PNV Y ++ L
Sbjct: 587 HCRAGQTERARELLSDMVARGLAPNVVTYTALVSGL 622
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 99/232 (42%), Gaps = 8/232 (3%)
Query: 263 SCLVSGVRALIEMFSVLGLYE-MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
S L+SG+ ++ + L E M K K T V N LI +C+ K R++L
Sbjct: 511 STLISGLCSIARVDDARHLLEDMVKRQCKPT---VVTQNTLIHGLCKAGRIKEAREVLDA 567
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M G P +TYN ++ C+ GQ A ELL +M+ R P+ +TY + C+ +
Sbjct: 568 MVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANR 627
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
A F QM G P L T+ A I G+ + + K S +++Y
Sbjct: 628 LPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGT 687
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNV---SVYRRVLKHLHTSHQEHMA 490
LA+ K+ A +L E + LR VYR + L + + MA
Sbjct: 688 LAAELCKSGRSARALEILRE-GRESLRSEAWGDEVYRFAVDGLLEAGKMEMA 738
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 85/191 (44%), Gaps = 10/191 (5%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI +C F R+L +M + GC P +TYN ++ CK G +AC+L+++M+
Sbjct: 361 YTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMI 420
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY------- 411
PD +TY + C+ + + A FN+M + G P +H I G
Sbjct: 421 EDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKID 480
Query: 412 --FIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
+ ++A++ + D + YS L S A+++L +M+K +P
Sbjct: 481 QACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKP 540
Query: 470 NVSVYRRVLKH 480
V V + L H
Sbjct: 541 TV-VTQNTLIH 550
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 104/232 (44%), Gaps = 18/232 (7%)
Query: 264 CLVSGVRALIEMFSVLGLYEMAKYVIKK------TERKVSYYNIL--------IKEMCRR 309
CLV+ + L+E F G + A+ +++ +VSY +L ++E R
Sbjct: 211 CLVT-LNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVR- 268
Query: 310 CDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITY 369
G R+L P YN V+ LC+N + +A ++ E+M RN PD+ +Y
Sbjct: 269 --LFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSY 326
Query: 370 EIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSAD 429
I I + GK + A N F +++ G+ P + + I G + ++DA +
Sbjct: 327 GILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNR 386
Query: 430 KYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ S + Y+++ K A +++ +M+++G P+V Y V+ L
Sbjct: 387 RGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGL 438
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 63/142 (44%), Gaps = 4/142 (2%)
Query: 283 EMAKYVIKKTERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
E + K ER VS Y ILI + + R+L ++ G P T+ Y ++
Sbjct: 306 EAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLI 365
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
LC DA EL +M R C P +TY + I SC+ G + A + +M++ G
Sbjct: 366 HGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHV 425
Query: 399 PRLATHAAFIKGYFIFYRYEDA 420
P + T+ + G R E+A
Sbjct: 426 PDVVTYNTVMDGLCKSSRVEEA 447
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 66/161 (40%), Gaps = 8/161 (4%)
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
EP +T N +L C GQ A ELL M C PD ++Y + C+ G+ + A
Sbjct: 209 EPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVR 268
Query: 388 FFNQMVKRGLQPRLATHAAFIKGYFIFY-------RYEDAYKYVVLSADKYKSSSNMLYS 440
F + ++ ++GY I R ++A + ++ S + Y
Sbjct: 269 LFGDR-ELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYG 327
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+L K A+N+ +++ +G+ P+ Y ++ L
Sbjct: 328 ILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGL 368
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 49/116 (42%), Gaps = 6/116 (5%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI C G L EM G P + Y + LCK+G+ A A E+L E
Sbjct: 650 YTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILRE-- 707
Query: 359 GR-NCHPDAITYEIF---IVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
GR + +A E++ + GK ++A F MV+ G P A+ + G
Sbjct: 708 GRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAG 763
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 36/75 (48%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P YN ++ L K + ++++ M+ R C PD+ T+ + C+ GK D A
Sbjct: 42 PYPDVYNVLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELV 101
Query: 389 FNQMVKRGLQPRLAT 403
++M R + P AT
Sbjct: 102 MDEMRSRMIPPYFAT 116
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 43/94 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+LI + +R + + + ++ M GC P + T+ +L LCK G+ +A +++EM
Sbjct: 47 YNVLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMR 106
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
R P T C G + AF M
Sbjct: 107 SRMIPPYFATSSFLAHELCLRGSMERAFQLLEIM 140
>gi|255660784|gb|ACU25561.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 418
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 85/183 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ +L EM P +T+ ++ CKNG+ A E+ +
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G A + ++M +GL+P T+ I G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEG 325
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A+KY + ++ Y+ L S + V A+ +L EM+ GL+P + Y
Sbjct: 326 DLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 385
Query: 476 RVL 478
++
Sbjct: 386 MII 388
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 74/181 (40%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ + + + + + + + P +++N ++ K G + L M
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
PD TY + I C+ K D A F++M+ L P T I G+ R
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDGHCKNGRV 257
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ A + + S + Y+ L K + A++++ EM GL+P+ Y +
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTL 317
Query: 478 L 478
+
Sbjct: 318 I 318
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 108/229 (47%), Gaps = 15/229 (6%)
Query: 265 LVSGVRALIEMFSVLG-LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMR 323
+V+G+ L + S L L +M + IK V Y+ ++ +C+ + +++ EM
Sbjct: 51 IVNGMCKLGDTVSALNMLRKMDESQIKA---NVVIYSAIVDRLCKDGNHIKAQNIFTEMH 107
Query: 324 QVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
+ G P LTYN ++ C G+ +DA +LL +M+ RN PD +T+ I + GK
Sbjct: 108 EKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVS 167
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
A + +M++R + P T+++ I G+ R EDA L K S + + L
Sbjct: 168 GAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLI 227
Query: 444 S---------LHD--KNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+H + N +A+++ EM+ NG+ P++ +L L
Sbjct: 228 DGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGL 276
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 84/198 (42%), Gaps = 35/198 (17%)
Query: 289 IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
+ E V YNILI + +F D+ +EM G P T+TYN ++ CK +
Sbjct: 329 VNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLE 388
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
+A ++++ M+ C PD +T+ I C+ G+ D F++M +RGL T+ A I
Sbjct: 389 EARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALI 448
Query: 409 KGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLR 468
G+ + D N A+++ EM+ +G+
Sbjct: 449 HGF-------------------------------CKVGDLNG----AQDIFEEMVSSGVC 473
Query: 469 PNVSVYRRVLKHLHTSHQ 486
P+ +R +L L T +
Sbjct: 474 PDTITFRSMLAGLCTKAE 491
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 87/208 (41%), Gaps = 4/208 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V + L+ +CR L+ M + G +P +TY ++ +CK G A +L
Sbjct: 10 VVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNMLR 69
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M + + Y + C+ G A N F +M ++G+ P + T+ I GY +
Sbjct: 70 KMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYG 129
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
++ DA + + ++ + +S L + K A+ + EM++ + P Y
Sbjct: 130 KWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYS 189
Query: 476 RVL----KHLHTSHQEHMAKCLSSRYSS 499
++ KH +HM + S+ S
Sbjct: 190 SMIDGFCKHSRLEDAKHMFDLMVSKGCS 217
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 53/118 (44%)
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
M+ C + +T+ + CR G+ A ++MV+ G QP T+ + G
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
A + + ++ ++YS + K+ N + A+N+ +EM + G+ PNV Y
Sbjct: 61 TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTY 118
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 41/99 (41%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V ++ LIK C+ +L EM Q G T+TYN ++ CK G A ++ E
Sbjct: 406 VVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFE 465
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
EM+ PD IT+ + C + + K
Sbjct: 466 EMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQK 504
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 88/190 (46%)
Query: 289 IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
+K E + +N++I +CR K ++LVEM + G P +TYN ++ CK G
Sbjct: 46 LKGLEPNLITFNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFH 105
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
A L EM+ P+ +TY I C+ G + A FF+QM RGL P T+ I
Sbjct: 106 QALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTII 165
Query: 409 KGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLR 468
G+ ++AY+ + S + Y+ L + H A +L +M+ G+
Sbjct: 166 NGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVL 225
Query: 469 PNVSVYRRVL 478
P+V Y ++
Sbjct: 226 PDVVSYSTII 235
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 6/200 (3%)
Query: 216 QLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEM 275
+ + +V +C NE+ + + + + L + +RV+ + + G + ALI
Sbjct: 144 EFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEA-YRVLNEMTRSGFIPSIVTYNALING 202
Query: 276 FSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPI 330
VLG E A +++ K V Y+ +I R + + VEM P
Sbjct: 203 HCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPD 262
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN 390
+TY+ ++ LC+ + +AC++ +EML PD TY I C+ G + A + +
Sbjct: 263 AVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHD 322
Query: 391 QMVKRGLQPRLATHAAFIKG 410
+M+++G P T+ I G
Sbjct: 323 EMIQKGFLPDAVTYNVLING 342
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 79/189 (41%), Gaps = 15/189 (7%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL---------------GVLCK 343
YN+LI + ++ K R LL+++ P +TYN ++ C
Sbjct: 336 YNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCM 395
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
G +A ++ E M+ +N P+ Y + I CR+G A+ + +MV P T
Sbjct: 396 KGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVT 455
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
A +K F + + + K + L +L ++ K N M N+L+EM
Sbjct: 456 VLALVKALFTEGMDGELNEVIGDILRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMA 515
Query: 464 KNGLRPNVS 472
K+GL P+
Sbjct: 516 KDGLIPSTG 524
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 61/129 (47%)
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+EM C P+ +TY I C++ + D AF F M +GL+P L T I G
Sbjct: 5 FFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLC 64
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
R ++ + +V + K + Y+ L + + K N A + +EM++NGL PNV
Sbjct: 65 RDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVV 124
Query: 473 VYRRVLKHL 481
Y ++ +
Sbjct: 125 TYTSLINSM 133
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 5/146 (3%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
+I F+ GL + A V+ + R + YN LI C + LL +M
Sbjct: 163 TIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGK 222
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P ++Y+ ++ +N + A ++ EM+G++ PDA+TY I C + A
Sbjct: 223 GVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEA 282
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGY 411
+ F +M+ L P T+ I Y
Sbjct: 283 CDMFQEMLTIKLPPDEFTYTTLINAY 308
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 6/161 (3%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
EM + GC P +TYN ++ CK + +A L M + P+ IT+ + I CR G
Sbjct: 8 EMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDG 67
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKS--SSNML 438
+ +M ++G P T+ + GY + + ++ +VL A+ ++ S N++
Sbjct: 68 RLKETSEVLVEMSRKGYVPDEVTYNTLVNGY---CKEGNFHQALVLHAEMVRNGLSPNVV 124
Query: 439 -YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
Y+ L + K N A +M GL PN Y ++
Sbjct: 125 TYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTII 165
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 72/183 (39%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y LI MC+ + + +M G P TY ++ + G +A +L
Sbjct: 123 VVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLN 182
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM P +TY I C +G+ + A MV +G+ P + +++ I G+
Sbjct: 183 EMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQ 242
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ A++ V K + YS L + A ++ EM+ L P+ Y
Sbjct: 243 ELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYT 302
Query: 476 RVL 478
++
Sbjct: 303 TLI 305
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 7/139 (5%)
Query: 271 ALIEMFSVLGLYEMAKYVI-----KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
AL++ F + GL + A V K + + YN++I CR + L EM V
Sbjct: 388 ALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHV 447
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH-PDAITYEIFIVYSCRVGKFDV 384
P T+T ++ L G D + E++ ++L R+C DA ++ + + + G D+
Sbjct: 448 DFVPHTVTVLALVKALFTEGMDGELNEVIGDIL-RSCKLTDAELSKVLVEINQKEGNMDM 506
Query: 385 AFNFFNQMVKRGLQPRLAT 403
FN +M K GL P T
Sbjct: 507 VFNLLTEMAKDGLIPSTGT 525
>gi|255661038|gb|ACU25688.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 375
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 1/209 (0%)
Query: 282 YEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+E+ + + +K R V+ +NI+++ + + + M + G ++TY ++ L
Sbjct: 45 FELWELMGRKGSRNVASFNIMMRGLFDNGEVDQVISIWELMIENGFGEDSITYGILVDGL 104
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
CKNG + +LE G+ DA +Y I C+ K D A + + MVK G +P
Sbjct: 105 CKNGYANKSLHVLEIAEGKGGVLDAFSYSAMINGLCKEAKLDEAVSVLSGMVKNGCKPNT 164
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
+ A I G+ ++EDA + V + S + + Y+ L + K A +++ E
Sbjct: 165 HVYNALINGFVGASKFEDATR-VFREMGTHCSPNIVTYNTLINGLCKGERFGEAYDLVKE 223
Query: 462 MMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
M++ G +P VS Y ++K L H+ MA
Sbjct: 224 MLEKGWKPGVSTYSLLMKGLCLGHKLDMA 252
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 89/184 (48%), Gaps = 3/184 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI F+ + EM C P +TYN ++ LCK + +A +L++EML
Sbjct: 167 YNALINGFVGASKFEDATRVFREM-GTHCSPNIVTYNTLINGLCKGERFGEAYDLVKEML 225
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P TY + + C K D+A N +NQ++ +G +P + H I G + +
Sbjct: 226 EKGWKPGVSTYSLLMKGLCLGHKLDMAINLWNQVIAKGFKPDVQMHNILIHGLCSVGKTQ 285
Query: 419 DAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
A + + + + + N++ Y+ L K+ + A + + +++NGL+P++ Y
Sbjct: 286 LALS-LYFNMNXWNCAPNLVTYNTLMEGFYKDGDLRNALAIWAHILRNGLQPDIISYNIT 344
Query: 478 LKHL 481
LK L
Sbjct: 345 LKGL 348
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 49/118 (41%)
Query: 286 KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNG 345
+ + K + V +NILI +C + L M C P +TYN ++ K+G
Sbjct: 258 QVIAKGFKPDVQMHNILIHGLCSVGKTQLALSLYFNMNXWNCAPNLVTYNTLMEGFYKDG 317
Query: 346 QDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
+A + +L PD I+Y I + C + A F + V + L P + T
Sbjct: 318 DLRNALAIWAHILRNGLQPDIISYNITLKGLCSCNRISGAILFLHDAVTKKLVPTIIT 375
>gi|357122825|ref|XP_003563115.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Brachypodium distachyon]
Length = 410
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 92/204 (45%), Gaps = 7/204 (3%)
Query: 280 GLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
GL K I E + YNIL+ E CR +F+ R L EM G ++YN ++
Sbjct: 92 GLALFEKMRIGGIEPNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIA 151
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
LC+ + DA +LLE M P +T+ + + + GK A +F NQM G QP
Sbjct: 152 GLCRYRKMKDATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQP 211
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYK---SSSNMLYSLLASLHDKNNNPVMAK 456
T+ A I G F R D + +D + + + + Y++L + N+ A
Sbjct: 212 SAVTYNALIAG---FCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAF 268
Query: 457 NVLSEMMKNGLRPNVSVYRRVLKH 480
+ + M K GL +V Y VL H
Sbjct: 269 EMFAGMEKAGLEVDVRTY-GVLVH 291
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 65/154 (42%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+MR G +P +TYN ++ C+ A +M R P +TY I I R
Sbjct: 203 QMRMAGYQPSAVTYNALIAGFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFAREN 262
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
D AF F M K GL+ + T+ + + +DA K +K N++Y
Sbjct: 263 DMDKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNVIYD 322
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+L + + + A ++ EM K G PN + Y
Sbjct: 323 MLIYGYGREGSSYKAMKLIMEMRKKGFVPNSASY 356
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 75/173 (43%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
L+ CR D + + M ++G P +T+ ++ +G+ L E+M
Sbjct: 44 LVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRREKGLALFEKMRIGG 103
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
P+ TY I + CR G+F+ A F +M +G+ + ++ I G + + +DA
Sbjct: 104 IEPNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDAT 163
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + L + S + ++LL + K A + ++M G +P+ Y
Sbjct: 164 QLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTY 216
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 48/106 (45%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V Y +L+ +C + K R L + + G + + Y+ ++ + G A +
Sbjct: 280 EVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNVIYDMLIYGYGREGSSYKAMK 339
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
L+ EM + P++ +Y + I C GK A + MV+ G+Q
Sbjct: 340 LIMEMRKKGFVPNSASYGLTIRILCNDGKCSEAEALIDDMVRAGVQ 385
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 131/290 (45%), Gaps = 33/290 (11%)
Query: 206 GRLD-DYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSC 264
GRLD M QLL D N K ++ +T+ GI +++L+++
Sbjct: 195 GRLDLALRVMDQLLKD--------NCKPTVITYTILIEATITQGGIDEAMKLLDEM---- 242
Query: 265 LVSGVRALIEMFSVL-------GLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDF 312
L G+R ++V+ G+ + A + + + VS YNIL++++ +
Sbjct: 243 LSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKW 302
Query: 313 KGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIF 372
+ L+ +M GCEP +TY+ ++ LC++G+ +A +L+ M + PD +Y+
Sbjct: 303 EYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPL 362
Query: 373 IVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY----KYVVLSA 428
I CR GK D+A F + M+ G P + ++ + + ++A K +
Sbjct: 363 ISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGC 422
Query: 429 DKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
S N L+ L S DK + A ++ EM+ NG+ P+ Y ++
Sbjct: 423 PPNAGSYNTLFGALWSSGDK----IRALGMILEMLSNGIDPDEITYNSLI 468
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 93/213 (43%)
Query: 269 VRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCE 328
++ M + ++ + + K + V YN +I C+ +L M++ G E
Sbjct: 119 IKGFFNMKKIEKAIQVMEILEKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFE 178
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P +TYN ++G C G+ A +++++L NC P ITY I I + G D A
Sbjct: 179 PDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKL 238
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
++M+ RGL+P T+ + G + A++++ + + Y++L
Sbjct: 239 LDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLN 298
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ ++S+M+ G PN Y ++ L
Sbjct: 299 EGKWEYGEKLMSDMLVKGCEPNPITYSTLITAL 331
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 2/122 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L + D +++EM G +P +TYN ++ LC++G A ELL +M
Sbjct: 429 YNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMF 488
Query: 359 -GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY-FIFYR 416
C P I+Y ++ C+V + A MV G P T+ I+G F +R
Sbjct: 489 ESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWR 548
Query: 417 YE 418
Y+
Sbjct: 549 YD 550
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 1/145 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++ +C+ + ++ ++ +VGC P +YN + G L +G A ++ EML
Sbjct: 394 YNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEML 453
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK-RGLQPRLATHAAFIKGYFIFYRY 417
PD ITY I CR G D A M + QP + ++ + G R
Sbjct: 454 SNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRI 513
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLL 442
DA + + ++ + Y+LL
Sbjct: 514 IDAIEVLAAMVNEGCLPNETTYTLL 538
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
SC+ K+D + F MV RG +P + IKG+F + E A + V+ +K+
Sbjct: 87 SCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQ-VMEILEKHGKPD 145
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
Y+ + S K + A VL M K G P+V Y
Sbjct: 146 VFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTY 184
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 86/181 (47%), Gaps = 1/181 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N LI C++ + +L +M G P +TYN VL L K ++ D E E M+
Sbjct: 464 FNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMV 523
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C P+ ITY I C+ GK + A + ++++ +G+ P + A I G+ +
Sbjct: 524 EKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLK 583
Query: 419 DAYKYVVLSADKYK-SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
AY+ ++YK S + Y+++ + + + M + + EM G P+ YR +
Sbjct: 584 GAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVM 643
Query: 478 L 478
+
Sbjct: 644 I 644
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 96/214 (44%), Gaps = 2/214 (0%)
Query: 265 LVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQ 324
L++G+ E+ L L+ A + K + V YN+LIK +C+ ++ EM +
Sbjct: 362 LINGLCQNDEIDRALALFNAA--LGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSE 419
Query: 325 VGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
GC TYN V+ LCK G +DA L+ + + + PD T+ I C+ K +
Sbjct: 420 NGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMET 479
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLAS 444
N+M G+ P + T+ + + G + ED + +K + + Y++L
Sbjct: 480 TIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTE 539
Query: 445 LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
K A +++ E++ G+ P+ + ++
Sbjct: 540 SLCKAGKVNEALDLVDEILNKGITPDTVSFATII 573
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 80/183 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+NI I+ +CR+ G +L + + G P +TYN ++ LCKN +A + L +++
Sbjct: 254 FNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLV 313
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD TY I C++G A + +G P T+ + I G +
Sbjct: 314 NGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEID 373
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + K + +LY++L + + A +++EM +NG ++ Y V+
Sbjct: 374 RALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVI 433
Query: 479 KHL 481
L
Sbjct: 434 NGL 436
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 84/186 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
VS +N L+ +C++ + + LL ++ + G T+N + LC+ G + A +L+
Sbjct: 216 VSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLD 275
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
++ PD +TY I C+ A + +++V GL+P T+ I GY
Sbjct: 276 SVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMG 335
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
++A K + + K Y L + +N+ A + + + GL+P V +Y
Sbjct: 336 MLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYN 395
Query: 476 RVLKHL 481
++K L
Sbjct: 396 MLIKGL 401
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
+L +M ++G P T+N +L LCK G+ ++ LL ++L + + T+ IFI
Sbjct: 202 ELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGL 261
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
CR G A + + +++ GL P + T+ I G
Sbjct: 262 CRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICG 295
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 70/179 (39%), Gaps = 35/179 (19%)
Query: 303 IKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNC 362
+K R+ + D+ M CEP L+YN ++ +L ++G A ++ M
Sbjct: 83 MKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGI 142
Query: 363 HPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
PD T+ I I CR + A N MV +G Q + + G+ YE+ Y+
Sbjct: 143 VPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGF-----YEENYR 197
Query: 423 YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
V A + ++M++ G+ P+VS + ++L L
Sbjct: 198 ------------------------------VEAYELFNDMLRIGIFPDVSTFNKLLHTL 226
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 51/134 (38%), Gaps = 2/134 (1%)
Query: 292 TERKVSYYNILIKEMCRRCDFKGPRDLLVEM-RQVGCEPITLTYNYVLGVLCKNGQDADA 350
T VS+ I I D KG L M Q T TYN ++ +
Sbjct: 563 TPDTVSFATI-ISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMG 621
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+L EM C PD TY + I C G D + F +M+++G P L T I
Sbjct: 622 EKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINC 681
Query: 411 YFIFYRYEDAYKYV 424
+ +R +A +
Sbjct: 682 LCVQHRVHEAVDII 695
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 44/112 (39%)
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
K + YNI+I + D L +EM GC P T TY ++ C G
Sbjct: 597 KVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSG 656
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLA 402
+ L EM+ + P T+ I C + A + + MV G+ P +
Sbjct: 657 YKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEVV 708
>gi|449454008|ref|XP_004144748.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cucumis sativus]
gi|449490811|ref|XP_004158714.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cucumis sativus]
Length = 621
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 79/371 (21%), Positives = 147/371 (39%), Gaps = 23/371 (6%)
Query: 132 QVSEIIELLRSGDSETESKLLSMSVSLSNASVIEILRVLNSEKVSALCFLKYMREIMPEF 191
+V ++I+ L + D E+ L V LS+ V+E+L + A F + + P F
Sbjct: 147 RVCKVIDELFALDRNMEAVLDECGVKLSHDLVLEVLARFKQARKPAFRFFCWAAQ-KPGF 205
Query: 192 YKNSDICSLVIDNCGRLDDYETMRQLLNDF--------NVYQVCLNEKAFGFLPVLISSK 243
+S + ++ G+ +ETM LL + + VC KAF +
Sbjct: 206 AHDSKTYNTMMTILGKTRQFETMVSLLEEMAEKELLTMETFTVCF--KAF--------AA 255
Query: 244 ALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK----VSYY 299
A +K V+E++ + V + L++ L + A + +K + + Y
Sbjct: 256 AKERKKAVGVLELMKKYKYKVGVETINCLLDSLGRAKLGKEALTIFEKLHGRFTPNLQTY 315
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
+L+ CR + + +M +P + +N +L L + + +DA +L E M
Sbjct: 316 TVLLNGWCRVRNLMEAGKIWNQMIDEDFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKA 375
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
+ PD +Y I + C+ K A +F +M G +P A + I G+ R +
Sbjct: 376 KGPSPDVKSYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPDAAIYTCLITGFGNQKRMDT 435
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
Y + Y+ L L P A + +M++NG++P Y ++K
Sbjct: 436 VYGLLKEMKANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIENGIKPTTHTYSMMMK 495
Query: 480 HLHTSHQEHMA 490
+ M
Sbjct: 496 SYFQTRNYEMG 506
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 66/149 (44%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
LL EM+ GC P TYN ++ ++ DA + ++M+ P TY + +
Sbjct: 439 LLKEMKANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIENGIKPTTHTYSMMMKSYF 498
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ +++ +++M +G P ++ FI G R +A KY+ +K + +
Sbjct: 499 QTRNYEMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLGRCAEAGKYLEEMIEKGMKAPQL 558
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNG 466
Y+ A+ + P + + + +M +G
Sbjct: 559 DYNKFAADFSRAGRPDILEELAQKMKFSG 587
>gi|410109903|gb|AFV61031.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
montevidensis]
Length = 431
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 88/183 (48%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ +L EM G P ++T+ ++ CKNG+ A E+ +
Sbjct: 212 VYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYK 271
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G A + ++M +GL+P T+ I G
Sbjct: 272 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDG 331
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ A+++ + +++Y+ L S + V A+ +L EM+ GL+P+ Y
Sbjct: 332 DLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDAEKMLREMLSVGLKPDARTYT 391
Query: 476 RVL 478
++
Sbjct: 392 MII 394
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 78/181 (43%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ C+ D + + + + + G P ++YN ++ + G + L M
Sbjct: 144 FFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAM 203
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
L PD TY + I C+ K D A F++M+ +GL P T I G+ R
Sbjct: 204 LASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRV 263
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ A + + S + Y+ L K + A +++ EM GL+P+ Y +
Sbjct: 264 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTL 323
Query: 478 L 478
+
Sbjct: 324 I 324
>gi|255660966|gb|ACU25652.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 376
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 2/187 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI + F+ + EM + C P +TYN ++ LCKN +A L++
Sbjct: 164 VHVYNTLINGLAGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVK 223
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
E+L + P ITY + + C K + A +NQ++ +G +P + H I G
Sbjct: 224 ELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVG 283
Query: 416 RYEDAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + A + +++K + N++ ++ L K+ + A + + +++NGL P++ Y
Sbjct: 284 KMQLALS-LYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALMIWARILRNGLEPDIISY 342
Query: 475 RRVLKHL 481
LK L
Sbjct: 343 NITLKGL 349
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%)
Query: 282 YEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+E+ + + + R VS +NI+++ + + M++ G ++TY ++
Sbjct: 45 FELWEMMGSEGNRSVSSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGF 104
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
CKNG + +LE + DA Y I C+ D A + N M+K G +P +
Sbjct: 105 CKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNV 164
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
+ I G ++EDA + + S + + Y+ L + KN A N++ E
Sbjct: 165 HVYNTLINGLAGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKE 224
Query: 462 MMKNGLRPNVSVYRRVLKHLHTSHQ 486
++ GL P V Y ++K L H+
Sbjct: 225 LLDKGLDPGVITYSMLMKGLCLDHK 249
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 64/161 (39%), Gaps = 35/161 (21%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C+ F +L+ E+ G +P +TY+ ++ LC + + A +L +++
Sbjct: 202 YNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVI 261
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM-------------------------- 392
+ PD + I I C VGK +A + + M
Sbjct: 262 SKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIR 321
Query: 393 ---------VKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV 424
++ GL+P + ++ +KG R DA ++
Sbjct: 322 NALMIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFL 362
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 59/142 (41%), Gaps = 8/142 (5%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
G CL V +++++ + + K + V +NILI +C + L +
Sbjct: 243 GLCLDHKVERALQLWN--------QVISKGFKPDVQMHNILIHGLCSVGKMQLALSLYFD 294
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M + C P +++N ++ K+G +A + +L PD I+Y I + C +
Sbjct: 295 MNRWKCAPNLVSHNTLMEGFYKDGDIRNALMIWARILRNGLEPDIISYNITLKGLCSCNR 354
Query: 382 FDVAFNFFNQMVKRGLQPRLAT 403
A F + V + + P T
Sbjct: 355 ISDAILFLHDAVTKKIVPTKIT 376
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 81/184 (44%), Gaps = 6/184 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ++I CR + EM GC P +TYN +L LCK + DA LL EM
Sbjct: 334 YTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMR 393
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R PD T+ I C GK D A F+ M+ + L+P + T+ I G R
Sbjct: 394 ERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDG---MCRQG 450
Query: 419 DAYKYVVLSADKYKSS---SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
D K L D + +++ YS+L H + A L EM+ G+ PN+ Y
Sbjct: 451 DLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYN 510
Query: 476 RVLK 479
++K
Sbjct: 511 SIIK 514
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 92/215 (42%), Gaps = 8/215 (3%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+ G C+ + +++F + + ++ + YN LI MCR+ D DL
Sbjct: 408 IHGYCIEGKLDKALQLFDTM--------LNQRLRPDIVTYNTLIDGMCRQGDLDKANDLW 459
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
+M P +TY+ ++ C+ GQ DA L+EM+ + P+ +TY I CR
Sbjct: 460 DDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRS 519
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
G F +M+ + P L T+ I GY + DA+K + + + + Y
Sbjct: 520 GNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTY 579
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
++L + + N A + +M G+ P+ Y
Sbjct: 580 NMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTY 614
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 87/195 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN L+ +C+ LL EMR+ G P T+ ++ C G+ A +L +
Sbjct: 366 VVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFD 425
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
ML + PD +TY I CR G D A + ++ M R + P T++ I +
Sbjct: 426 TMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKG 485
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ EDA+ ++ +K + M Y+ + + ++ N + L +MM N + P++ Y
Sbjct: 486 QVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYN 545
Query: 476 RVLKHLHTSHQEHMA 490
++ + H A
Sbjct: 546 TLIHGYIKEDKMHDA 560
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 80/217 (36%), Gaps = 32/217 (14%)
Query: 201 VIDNCGRLDDYETMRQLLNDFNVYQVCLN-----------------EKAFGFLPVLISSK 243
+ID R D + L +D + ++ N E AFGFL +I+
Sbjct: 442 LIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMIN-- 499
Query: 244 ALTKKGIWRVVEVLNQV-GGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNIL 302
KGI + N + G C V G + K ++ K + YN L
Sbjct: 500 ----KGILPNIMTYNSIIKGYCRSGNVSK--------GQKFLQKMMVNKVSPDLITYNTL 547
Query: 303 IKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNC 362
I + LL M + +P +TYN ++ +G +A + E+M +
Sbjct: 548 IHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGI 607
Query: 363 HPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
PD TY I G AF ++M++RG P
Sbjct: 608 EPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAP 644
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 55/124 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +IK CR + + L +M P +TYN ++ K + DA +LL M
Sbjct: 509 YNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMME 568
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD +TY + I G A F +M +G++P T+ + I G+ +
Sbjct: 569 KEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSK 628
Query: 419 DAYK 422
+A++
Sbjct: 629 EAFQ 632
>gi|255660830|gb|ACU25584.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 418
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 86/183 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ +L EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I CR G A + ++M +GL+P T+ I G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLIDGXCKEG 325
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A+++ + ++ Y+ L S + + A+ VL EM+ GL+P+ Y
Sbjct: 326 DLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTITYT 385
Query: 476 RVL 478
++
Sbjct: 386 MII 388
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 55/115 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +N L+ R D L M G +P TY+ ++ LCK + DA EL +
Sbjct: 171 VVSFNTLMNGYIRLGDLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFD 230
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
EML + P+ +T+ I C+ G+ D+A + QM+ + L P L T+ I G
Sbjct: 231 EMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 285
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 79/181 (43%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ + C+ D + + + + + G P +++N ++ + G + L M
Sbjct: 138 FFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKTAM 197
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
PD TY + I C+ K D A F++M+ +GL P T I G+ R
Sbjct: 198 HASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRV 257
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ A + + S + Y+ L + + A++++ EM GL+P+ Y +
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTL 317
Query: 478 L 478
+
Sbjct: 318 I 318
>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
Length = 826
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 111/260 (42%), Gaps = 9/260 (3%)
Query: 258 NQVGGSCLVSGV--RALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRC 310
++ G C+ + V L++ + G E A + K+ + K Y I+I +C++C
Sbjct: 230 DRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKC 289
Query: 311 DFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYE 370
+FK LLVEM++ G + YN ++ K+G + + L + C PD TY
Sbjct: 290 NFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYN 349
Query: 371 IFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADK 430
I SCR GK A +KRGL P ++ I Y + A+ + +K
Sbjct: 350 TLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEK 409
Query: 431 YKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
+ Y L +A V +M++ G+ P+ +VY ++ L + A
Sbjct: 410 GHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAA 469
Query: 491 KCL--SSRYSSLSLGSSVEA 508
K L + +LSL + V A
Sbjct: 470 KLLLVEMLHQNLSLDAFVSA 489
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 70/159 (44%), Gaps = 3/159 (1%)
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
RD +VE G P YN ++ LCK G+ + A LL EML +N DA +
Sbjct: 438 RDKMVER---GVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDG 494
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
R GK D A F + +G+ P + + A IKGY F DA V D S
Sbjct: 495 FIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPD 554
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
YS + + K N+ A + +M+K +PNV Y
Sbjct: 555 EFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTY 593
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 66/156 (42%), Gaps = 16/156 (10%)
Query: 263 SCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
S ++ G ++ + L L+ + V +K + V Y LI CR D EM
Sbjct: 559 STIIDGYVKQNDLHNALKLF--GQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEM 616
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFI--------- 373
R G +P +TY ++G CK G+ + AC E ML C P+ +T+ I
Sbjct: 617 RSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLINGLTNNLAT 676
Query: 374 VYSCRVG-----KFDVAFNFFNQMVKRGLQPRLATH 404
S + K + +FF M+ G + R+A +
Sbjct: 677 AVSNKANESLEIKASLMMDFFRTMISDGWEQRVAAY 712
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 84/210 (40%), Gaps = 27/210 (12%)
Query: 210 DYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWR-----VVEVLNQ-VGGS 263
D R +L D NVY V +N L KKG +VE+L+Q +
Sbjct: 439 DKMVERGVLPDANVYNVLMN--------------GLCKKGRLSAAKLLLVEMLHQNLSLD 484
Query: 264 CLVSGVRALIEMFSVLGLYEMAK-----YVIKKTERKVSYYNILIKEMCRRCDFKGPRDL 318
VS L++ F G + AK + K + V YN +IK C+
Sbjct: 485 AFVSA--TLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTC 542
Query: 319 LVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCR 378
+ M+ P TY+ ++ K +A +L +M+ + C P+ +TY I CR
Sbjct: 543 VQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCR 602
Query: 379 VGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
G A F +M GL+P + T+ I
Sbjct: 603 TGDSSRAEKTFEEMRSSGLKPNVVTYTILI 632
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 49/112 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ +I ++ D L +M + C+P +TY ++ C+ G + A + EEM
Sbjct: 558 YSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMR 617
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
P+ +TY I I C+ GK A +FF M+ P T I G
Sbjct: 618 SSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLING 669
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 92/266 (34%), Gaps = 77/266 (28%)
Query: 244 ALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILI 303
+T+KG L+ V LV G+ A E+ L + + K V + + YN+L+
Sbjct: 405 GMTEKG-----HPLDLVAYGALVHGLVAAGEVDVALTVRD--KMVERGVLPDANVYNVLM 457
Query: 304 KEMCRRCDFKGPRDLLVEMRQV-----------------------------------GCE 328
+C++ + LLVEM G +
Sbjct: 458 NGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMD 517
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P + YN ++ CK G DA ++ M + PD TY I + A
Sbjct: 518 PGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKL 577
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
F QMVK+ +P + T+ + I G F R D+ +
Sbjct: 578 FGQMVKQKCKPNVVTYTSLING---FCRTGDSSR-------------------------- 608
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVY 474
A+ EM +GL+PNV Y
Sbjct: 609 ------AEKTFEEMRSSGLKPNVVTY 628
Score = 38.9 bits (89), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 83/207 (40%), Gaps = 9/207 (4%)
Query: 269 VRALIEMFSVLGLYEMAKYVIKKTERKVSYYN-----ILIKEMCRRCDFKGPRDLLVEMR 323
+ ALI+ V E+A+ V ++ ++ ++ I+++ +C+ + R L+ +
Sbjct: 177 LNALIQQKKV----EIARKVYEEMVKRDGCWDNYSVCIMVRGLCKERKVEEGRKLINDRW 232
Query: 324 QVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
GC P + YN ++ K G A L +E+ + P TY I I C+ F
Sbjct: 233 GKGCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFK 292
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
+M +RG+ + + + + + K + + Y+ L
Sbjct: 293 AVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLI 352
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPN 470
S ++ A+ +L +K GL PN
Sbjct: 353 SGSCRDGKVHEAEELLEHAIKRGLSPN 379
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 4/208 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+K +C+ D + LL EM VG +P T TYN ++ K + +LL EM
Sbjct: 379 YNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMK 438
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
N P A T + I CR G + A F MV G++P + IKG+ R++
Sbjct: 439 KSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQ 498
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + + + K + Y+ + K+ AK+ L EM++ GL+PNV Y ++
Sbjct: 499 EAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALI 558
Query: 479 KHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
S + +A RY LG +
Sbjct: 559 HGYCKSGEMQVA----DRYFKEMLGCGI 582
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 67/136 (49%)
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN 390
T + N ++ CK+G+ +A +LLE+M+ ++ PD +TY I I Y C+ G A FF
Sbjct: 795 TSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFV 854
Query: 391 QMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNN 450
M KR L P T+ A + GY + R + + K + +S++ H K
Sbjct: 855 DMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEG 914
Query: 451 NPVMAKNVLSEMMKNG 466
+ V ++ +M+K G
Sbjct: 915 DHVKTLKLVDDMLKKG 930
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 1/191 (0%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
+++++ K V YN +I C++ L M Q G P +TYN ++ LCK
Sbjct: 644 LSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCK 703
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
G+ A EL + + G+ +A+TY I C+ G AF F++M +G+ P
Sbjct: 704 AGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFV 763
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
++A I G E A + S K +S++ L +L+ K+ + A +L +M+
Sbjct: 764 YSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFC-KSGKVIEANQLLEDMV 822
Query: 464 KNGLRPNVSVY 474
++P+ Y
Sbjct: 823 DKHVKPDHVTY 833
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 84/194 (43%), Gaps = 20/194 (10%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y LI R + K + LL EM + GC P +TYN V+G LC+ G+ +A EL +
Sbjct: 236 VYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKK 295
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M + D TY I I + + A +M +GL+P + A I G F
Sbjct: 296 LMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDG---FM 352
Query: 416 RYEDAYKYVVLSADKYKSSSNML----------YSLLASLHDKNNNPVMAKNVLSEMMKN 465
R D S + ++ ML Y+ L K + A +L+EM+
Sbjct: 353 RQGD-------SGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMV 405
Query: 466 GLRPNVSVYRRVLK 479
G++P+ Y +++
Sbjct: 406 GIKPDTQTYNNMIE 419
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 54/116 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ LI + R +G +LL E + G P TYN ++ CK G A +L E
Sbjct: 621 VRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHE 680
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
M + P+ ITY I C+ G+ + A F+ + +GL T+A I GY
Sbjct: 681 YMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGY 736
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 4/202 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I+ + + +DLL EM++ P T ++ LC++G DA + E M+
Sbjct: 414 YNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMV 473
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+A+ Y I + G+F A M K+G+QP + + + I G + E
Sbjct: 474 SLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKME 533
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A Y+V ++ + Y L + K+ +A EM+ G+ PN V ++
Sbjct: 534 EAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALI 593
Query: 479 ----KHLHTSHQEHMAKCLSSR 496
K T+ + +C+ R
Sbjct: 594 DGYCKEGSTTEATSIFRCMLGR 615
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 5/235 (2%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEM 306
RV E++ +G LI+ G ++ A ++K ++K V YN +I +
Sbjct: 467 RVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGL 526
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
C+ + +D LVEM + G +P TY ++ CK+G+ A +EMLG P+
Sbjct: 527 CKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPND 586
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
+ I C+ G A + F M+ R + P + T++A I G + + A + +
Sbjct: 587 VVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSE 646
Query: 427 SADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+K Y+ + S K A + M + G+ PN+ Y ++ L
Sbjct: 647 FLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGL 701
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 282 YEMAKYVIKKT-ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
+E+ K + KK V Y+ILI ++ + +L EM G +P + Y ++
Sbjct: 291 FELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDG 350
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
+ G +A + EEML R + TY + C+ G + A N+M+ G++P
Sbjct: 351 FMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPD 410
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKS-------SSNMLYSLL---ASLHDKNN 450
T+ I+GY + ++ + L ++ KS + M+ + L S+ D
Sbjct: 411 TQTYNNMIEGYL---KEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIED--- 464
Query: 451 NPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
A V M+ G++PN +Y ++K
Sbjct: 465 ----ASRVFEIMVSLGVKPNAVIYTTLIK 489
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 84/202 (41%), Gaps = 10/202 (4%)
Query: 263 SCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
S L+ G R L L+ + ++K S N L+ C+ LL +M
Sbjct: 765 SALIDGCRKEGNTEKALSLFLES---VQKGFASTSSLNALMDGFCKSGKVIEANQLLEDM 821
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
+P +TY ++ CK G +A + +M RN P+A+TY + G+
Sbjct: 822 VDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRR 881
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
F F++M+ + ++P T + I + + D K + L D K N+ ++
Sbjct: 882 SEMFALFDEMIAKDIEPDGVTWSVMIDAHL---KEGDHVKTLKLVDDMLKKGGNVSKNVC 938
Query: 443 ASLHDKNNNPVMAKNVLSEMMK 464
L D P+ K +SE++K
Sbjct: 939 HVLID----PLCRKEHVSEVLK 956
>gi|255660776|gb|ACU25557.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 418
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 85/183 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ +L EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
ML ++ PD ITY I C+ G A + ++M +GL+P T+ I G
Sbjct: 266 LMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEG 325
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A++Y + ++ Y+ L S + V A+ +L EM+ GL+P + Y
Sbjct: 326 DLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 385
Query: 476 RVL 478
++
Sbjct: 386 MII 388
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 76/181 (41%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ + + + + + + + P +++N ++ K G + L M
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
PD TY + I C+ K D A F++M+ GL P T I G+ R
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRV 257
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ A + L + S + Y+ L K + A++++ EM GL+P+ Y +
Sbjct: 258 DLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTL 317
Query: 478 L 478
+
Sbjct: 318 I 318
>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 2/183 (1%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N LI + R L EM + GC P ++YN ++ LCK G+ +A ++EML
Sbjct: 468 NALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLE 527
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
PD TY I + CR K D+A ++Q ++ GL+ + H I G + +D
Sbjct: 528 NGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDD 587
Query: 420 AYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A V+ + + ++N++ Y+ L K + A + M K GL+P++ Y ++
Sbjct: 588 AMT-VMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIM 646
Query: 479 KHL 481
K L
Sbjct: 647 KGL 649
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 7/184 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+LIK C++ +F+ R L M + G +P +Y+ V+ L K G+ DA EL +EM
Sbjct: 152 YNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMS 211
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR-GLQPRLATHAAFIKGYFIFYRY 417
R PD Y I I + A ++++++ + P + TH I G R
Sbjct: 212 ERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRV 271
Query: 418 EDAYKYVVLSADKYKSSSNMLY---SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+D K + K LY SL+ L D N A++V +E+ + +V Y
Sbjct: 272 DDCLK--IWERMKQNEREKDLYTYSSLIHGLCDAGNVD-KAESVFNELDERKASIDVVTY 328
Query: 475 RRVL 478
+L
Sbjct: 329 NTML 332
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 65/167 (38%), Gaps = 6/167 (3%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKT------ERKVSYYNILIKE 305
R+VE++ C ++I+ + + + A V K+ E + YN L+
Sbjct: 64 RIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNA 123
Query: 306 MCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPD 365
+ L G P TYN ++ + CK + A L+ M PD
Sbjct: 124 FVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPD 183
Query: 366 AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+Y I + GK D A F++M +RG+ P + + I G+
Sbjct: 184 VFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFL 230
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 72/167 (43%), Gaps = 2/167 (1%)
Query: 317 DLLVEMRQV-GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
D+ MR++ GCEP +YN +L + Q L P+ TY + I
Sbjct: 99 DVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKM 158
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
SC+ +F+ A F + M K G +P + +++ I + +DA + +++ +
Sbjct: 159 SCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPD 218
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKN-GLRPNVSVYRRVLKHL 481
Y++L K + A + ++++ + PNV + ++ L
Sbjct: 219 VTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGL 265
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 109/291 (37%), Gaps = 28/291 (9%)
Query: 202 IDNCGRLDD----YETMRQLLNDFNVYQ-------VCLN---EKAFGFLPVLISSKALTK 247
+ CGR+DD +E M+Q + ++Y +C +KA L KA
Sbjct: 265 LSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASID 324
Query: 248 KGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMC 307
VV +GG C ++ +E++ ++ K + YNILIK +
Sbjct: 325 -----VVTYNTMLGGFCRCGKIKESLELWRIME---------HKNSVNIVSYNILIKGLL 370
Query: 308 RRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAI 367
+ M G TY + LC NG A +++E+ H D
Sbjct: 371 ENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVY 430
Query: 368 TYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLS 427
Y I C+ + + A N +M K G++ A I G R +A ++
Sbjct: 431 AYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREM 490
Query: 428 ADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ + Y++L K A + EM++NG +P++ Y +L
Sbjct: 491 GKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILL 541
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 1/117 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEM-RQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
V+ YNILI + D K +L + P T+N ++ L K G+ D ++
Sbjct: 219 VTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIW 278
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
E M D TY I C G D A + FN++ +R + T+ + G+
Sbjct: 279 ERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGF 335
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 42/118 (35%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V +NILI +C ++ M C +TYN ++ K G A
Sbjct: 566 ETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATV 625
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ M PD I+Y + C A FF+ G+ P + T ++
Sbjct: 626 IWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRA 683
>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Brachypodium distachyon]
Length = 1102
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 84/183 (45%), Gaps = 6/183 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ + + + DL EM GC+P YN +L G CEL + M+
Sbjct: 884 YGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMV 943
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ +PD +Y + I C G+ + + ++F Q+ + GL+P L T+ I G R E
Sbjct: 944 DQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLE 1003
Query: 419 DAYKYVVLSADKYKS--SSNM-LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+A V L D KS + N+ Y+ L K A + E++KNG +PNV Y
Sbjct: 1004 EA---VSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYN 1060
Query: 476 RVL 478
++
Sbjct: 1061 ALI 1063
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 103/246 (41%), Gaps = 38/246 (15%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L EM + +K V Y I I+ + + F+ +L +M GC+P +T ++ +
Sbjct: 239 LREMEDHGVKPN---VYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQI 295
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITY-----------------EIF----------- 372
LC G+ +DA ++ +M + PD +TY EI+
Sbjct: 296 LCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDN 355
Query: 373 -IVYS------CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV 425
+ Y+ C+VG+ D A + F+QM ++G++P+ ++ + I G+ R A +
Sbjct: 356 VVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFN 415
Query: 426 LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSH 485
+ + Y L + + K+ + A M G+ P+V VL L S
Sbjct: 416 HMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSG 475
Query: 486 QEHMAK 491
+ MAK
Sbjct: 476 RLGMAK 481
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 78/183 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I + + DL ++ G P TY +L L K+G+ DA +L +EML
Sbjct: 849 YNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEML 908
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C P+ Y I + G + F MV +G+ P + ++ I R
Sbjct: 909 DYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLN 968
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
D+ Y + + Y+LL ++ A ++ ++M K+G+ PN+ Y ++
Sbjct: 969 DSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLI 1028
Query: 479 KHL 481
+L
Sbjct: 1029 LYL 1031
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 61/126 (48%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ Y +LI +C ++ ++G EP +TYN ++ L ++G+ +A L
Sbjct: 951 IKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFN 1010
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M P+ TY I+Y + GK A + +++K G +P + T+ A I GY +
Sbjct: 1011 DMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSG 1070
Query: 416 RYEDAY 421
++A+
Sbjct: 1071 STDNAF 1076
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+LI + R + L +M + G P TYN ++ L K G+ A+A ++ EE+L
Sbjct: 989 YNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELL 1048
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
P+ TY I G D AF + QM+ G P +T+
Sbjct: 1049 KNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTY 1094
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ + R K LL EM P +TYN VL LCKNG+ A +L M
Sbjct: 569 YNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMT 628
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
+ C PD +Y + + + AF F QM K+ L P T
Sbjct: 629 MKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQM-KKVLAPDYTT 672
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 50/102 (49%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
E++++ +P TYN +L L + G+ + LLEEM + P+ ITY + C+ G
Sbjct: 556 ELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNG 615
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
+ + A M +G P L+++ + G R +A++
Sbjct: 616 EVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFR 657
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 78/195 (40%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y ++ +C+ D+ +M+Q G EP +YN ++ K + A EL
Sbjct: 356 VVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFN 415
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M P+ TY +FI Y + G+ A + M +G+ P + A +
Sbjct: 416 HMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSG 475
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R A + N+ Y+++ K +N A V SEM++ P+V
Sbjct: 476 RLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVN 535
Query: 476 RVLKHLHTSHQEHMA 490
++ L+ + + + A
Sbjct: 536 SLIDTLYKAGRGNEA 550
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 63/157 (40%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M+ G P + N VL L K+G+ A + E+ PD ITY + I +
Sbjct: 452 MKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASN 511
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
D A F++M++ P + + I + R +A+K + ++ Y+
Sbjct: 512 ADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNT 571
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
L + + ++L EM N PN+ Y VL
Sbjct: 572 LLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVL 608
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 79/192 (41%), Gaps = 16/192 (8%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
E++ +G P +TY ++ K +A ++ EM+ C PD + I + G
Sbjct: 486 ELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAG 545
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS---NM 437
+ + A+ F+++ + L P T+ + G E K V+ ++ S+S N+
Sbjct: 546 RGNEAWKIFHELKEMNLDPTDCTYNTLLAG----LGREGKVKEVMHLLEEMNSNSYPPNL 601
Query: 438 L-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQE--------H 488
+ Y+ + KN A +L M G P++S Y L L +
Sbjct: 602 ITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQ 661
Query: 489 MAKCLSSRYSSL 500
M K L+ Y++L
Sbjct: 662 MKKVLAPDYTTL 673
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 70/159 (44%), Gaps = 5/159 (3%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M++ G + TYN ++ L K+G D +A E+ + M P TY + ++ GK
Sbjct: 173 MKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLML---AFGK 229
Query: 382 FDV--AFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
DV +M G++P + ++ I+ R+E+AYK + D+ +
Sbjct: 230 RDVETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTN 289
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
++L + AK+V +M + +P+ Y +L
Sbjct: 290 TVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLL 328
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 91/186 (48%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y +I +C+ F + +M G +P TYN ++ G+ + ++LE
Sbjct: 234 VVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLE 293
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM R PD TY + Y C+ G+ A FF+ M+++G++P+++T+ I GY
Sbjct: 294 EMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKG 353
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ + ++ L + S + ++++ S + K A ++ ++M ++GL PNV Y
Sbjct: 354 ALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYG 413
Query: 476 RVLKHL 481
++ L
Sbjct: 414 ALIDAL 419
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 103/222 (46%), Gaps = 15/222 (6%)
Query: 272 LIEMFSVLGLYE---MAKYVIKKTERKVSYYNI--LIKEMCRRCDFKGPRDLLVE-MRQV 325
LI F +G E A +I KT ++ + I L+K +C D+L++ M ++
Sbjct: 96 LIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLLQRMPEL 155
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEML---GRNCHPDAITYEIFIVYSCRVGKF 382
GC P T++Y +L LC + +A ELL M GR C P+ ++Y I I G+
Sbjct: 156 GCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQV 215
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYF---IFYRYEDAYKYVVLSADKYKSSSNMLY 439
D +N F +M+ RG+ P + T+ I G +F R E ++ ++ D +N Y
Sbjct: 216 DKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMI---DNGFKPNNYTY 272
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ L + +L EM GL+P+ Y +L +L
Sbjct: 273 NCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYL 314
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 78/180 (43%), Gaps = 5/180 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVG---CEPITLTYNYVLGVLCKNGQDADACELLE 355
Y IL+K +C + +LL M C P ++Y+ V+ GQ L
Sbjct: 164 YTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFL 223
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM+ R PD +TY I C+ FD A F QM+ G +P T+ I GY
Sbjct: 224 EMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIG 283
Query: 416 RYEDAYKYV-VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
++++ + + +SA K SLL L KN A+ M++ G++P VS Y
Sbjct: 284 KWKEVVQMLEEMSARGLKPDCYTYGSLLNYLC-KNGRCREARFFFDSMIRKGIKPKVSTY 342
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 5/170 (2%)
Query: 257 LNQVGGSCLVSGVRALIEMFSVLGLYEMA-----KYVIKKTERKVSYYNILIKEMCRRCD 311
+ Q G S V ALI+ LG + A + + + + +N L+ +C
Sbjct: 400 MRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDK 459
Query: 312 FKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEI 371
++ +L+ EM G P + +N ++ LC G+ + L++ M PDA +Y
Sbjct: 460 WERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTP 519
Query: 372 FIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
I C G+ D A F+ MV GL P T+ + GY R +DAY
Sbjct: 520 LISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAY 569
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 115/289 (39%), Gaps = 9/289 (3%)
Query: 199 SLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLN 258
SLV C +D +E +L+ + +C N F L + + +G R+++++
Sbjct: 449 SLVYGLC-TVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEG-RRLIDLME 506
Query: 259 QVGGSCLVSGVRALIEMFSVLGLYEMAKYV------IKKTERKVSYYNILIKEMCRRCDF 312
VG LI + + G + A+ V I + +V+Y N L+ C
Sbjct: 507 HVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTY-NTLLHGYCSASRI 565
Query: 313 KGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIF 372
L EM + G P +TYN +L L + + ++A EL M+ D TY I
Sbjct: 566 DDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNII 625
Query: 373 IVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYK 432
+ C+ D AF F + +GLQ + T I R EDA
Sbjct: 626 LNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGL 685
Query: 433 SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + Y L+A + + ++ S M KNG PN + +++ L
Sbjct: 686 VPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRL 734
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 79/187 (42%), Gaps = 4/187 (2%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K + KVS Y ILI + L M + G P +N K G
Sbjct: 333 KGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDK 392
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A ++ +M P+ + Y I C++G+ D A FNQM+ G+ P + + +
Sbjct: 393 AMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVY 452
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLY-SLLASLHDKNNNPVMAKNVLSEMMKN-GL 467
G ++E A + V D+ + + + +L+ +L N VM L ++M++ G+
Sbjct: 453 GLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNL--CNVGRVMEGRRLIDLMEHVGV 510
Query: 468 RPNVSVY 474
RP+ Y
Sbjct: 511 RPDAFSY 517
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 78/186 (41%), Gaps = 6/186 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ +C+ + R M + G +P TY ++ G ++ L+ M+
Sbjct: 307 YGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMV 366
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD + IF + G D A + FN+M + GL P + + A I R +
Sbjct: 367 ENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVD 426
Query: 419 DA-YKYVVLSADKYKSSSNMLYSLLASL--HDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
DA K+ + + + + SL+ L DK A+ ++ EM+ G+ PN +
Sbjct: 427 DAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWER---AEELVYEMLDQGICPNAVFFN 483
Query: 476 RVLKHL 481
++ +L
Sbjct: 484 TLICNL 489
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ +I C+ + + L+ EM+ G +P TYN V+ +LCK G+ A+A +L EM+
Sbjct: 291 YSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMI 350
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD + Y I C++G A+ F++M KR + P T+ A I G R
Sbjct: 351 SEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVM 410
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+A K K + Y+ L + K A ++ ++M++ GL PN+ Y
Sbjct: 411 EADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTY 466
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 56/112 (50%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI C+ + L EM++ P +TY V+ LC+ G+ +A +L EM+
Sbjct: 361 YTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMV 420
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ PD +TY I C+ GK AF+ NQM++ GL P + T+ A G
Sbjct: 421 CKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADG 472
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 79/181 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L +C+ + +LL EM + G E TYN ++ LCK G A +L+++M
Sbjct: 466 YTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDME 525
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
HPDA+TY + C+ + A QM+ R LQP + T + G+ + E
Sbjct: 526 VAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLE 585
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
D K + +K + Y+ L + NN + M G+ P+ + Y ++
Sbjct: 586 DGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILI 645
Query: 479 K 479
K
Sbjct: 646 K 646
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 87/203 (42%), Gaps = 5/203 (2%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L+EM + K E + YN L+ +C+ + L+ +M G P +TY ++
Sbjct: 486 LHEMCR---KGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDA 542
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
CK+ + A ELL +ML R P +T+ + + C G + M+++G+ P
Sbjct: 543 YCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPN 602
Query: 401 LATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
T+ + IK Y I + Y + A N Y++L H K N A +
Sbjct: 603 ATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNT-YNILIKGHCKARNMKEAWFLH 661
Query: 460 SEMMKNGLRPNVSVYRRVLKHLH 482
+M+ G VS Y ++K +
Sbjct: 662 RDMVGKGFNLTVSSYNALIKGFY 684
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 78/193 (40%)
Query: 288 VIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQD 347
V K+ E Y LI C+ K L +M Q+G P +TY + LCK G+
Sbjct: 420 VCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEV 479
Query: 348 ADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAF 407
A ELL EM + + TY + C+ G D A M G P T+
Sbjct: 480 DTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTL 539
Query: 408 IKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
+ Y A++ + D+ + + +++L + + + +L M++ G+
Sbjct: 540 MDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGI 599
Query: 468 RPNVSVYRRVLKH 480
PN + Y ++K
Sbjct: 600 MPNATTYNSLIKQ 612
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 71/161 (44%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
+ VE +VG T +YN + LC+ G+ +A +LL +M R C PD I+Y I C
Sbjct: 240 VFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYC 299
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+VG+ +M +GL+P T+ I + +A + + + + +
Sbjct: 300 QVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGV 359
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+Y+ L K N A + EM K + P+ Y V+
Sbjct: 360 IYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVI 400
>gi|357115831|ref|XP_003559689.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Brachypodium distachyon]
Length = 968
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 95/203 (46%), Gaps = 13/203 (6%)
Query: 285 AKYVIKKTER----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
AK++I K + V YN ++ ++ FK +L +M + G E TYN ++
Sbjct: 244 AKHMIHKMKSCSLPNVITYNTILHWYVKKGRFKAAMCVLEDMEKNGVEADVYTYNIMIDK 303
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
LCK + A LL+ M G N PD TY I K +A + FN+M+++GL+P
Sbjct: 304 LCKMKRSTHAYLLLKRMRGDNLAPDECTYNTLIKGFFDESKMMLAIHIFNEMLRQGLKPS 363
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL--ASLHDKNNNPVMAKNV 458
LAT+ I GY ++A + + S + YS + S+H+ A +V
Sbjct: 364 LATYTTLIDGYCRNGTIDEALRVLYEMQVAGVKPSEVTYSAMLNGSVHE-------AFSV 416
Query: 459 LSEMMKNGLRPNVSVYRRVLKHL 481
M K G P+V YR +L+ L
Sbjct: 417 YDNMEKYGCSPDVYTYRNLLRGL 439
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%)
Query: 333 TYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
T N +L +C +G +A +L E+M+ N PD TY I + CR GK A M
Sbjct: 466 TLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQMM 525
Query: 393 VKRGLQPRLATHAAFIKG 410
+++GL P + T+ +KG
Sbjct: 526 LEKGLVPDIVTYTCLLKG 543
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 70/154 (45%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M Q P +YN ++ K G + + L ++M+ + P +TY + I+ + G
Sbjct: 595 DMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLILGLSKHG 654
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
++A F ++MV G+ P + I + R DA + Y S S+ YS
Sbjct: 655 MIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWLYMSPSSKTYS 714
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + + N + +VL +M+++GL P + Y
Sbjct: 715 AMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHY 748
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 78/200 (39%), Gaps = 2/200 (1%)
Query: 275 MFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
M L L+ K++ K Y+ +I + R+ + D+L +M + G EP Y
Sbjct: 691 MSDALQLFNCMKWLYMSPSSKT--YSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHY 748
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
++ C+ G A L EEM P + + + GK + F +++
Sbjct: 749 IALINAKCRFGDINGAFRLKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIR 808
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM 454
G+ P +AT + G + DA L + Y++L + K
Sbjct: 809 AGMVPTIATFTTLMHGLCKEAKISDALHLKSLMESCGLKIDVVTYNVLITGLCKIQCVSD 868
Query: 455 AKNVLSEMMKNGLRPNVSVY 474
A + EM GLRPNV+ Y
Sbjct: 869 ALELYEEMKSKGLRPNVTTY 888
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 39/89 (43%)
Query: 324 QVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
+ G P T+ ++ LCK + +DA L M D +TY + I C++
Sbjct: 808 RAGMVPTIATFTTLMHGLCKEAKISDALHLKSLMESCGLKIDVVTYNVLITGLCKIQCVS 867
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
A + +M +GL+P + T+ + +
Sbjct: 868 DALELYEEMKSKGLRPNVTTYTTLTEAIY 896
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 5/146 (3%)
Query: 270 RALIEMFSVLGLYEMAKYVIKKTERKVSY-----YNILIKEMCRRCDFKGPRDLLVEMRQ 324
R LI S G+ E+A + K + Y +++LI + L M+
Sbjct: 644 RLLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKW 703
Query: 325 VGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
+ P + TY+ ++ L + +C++L +M+ P Y I CR G +
Sbjct: 704 LYMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDING 763
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKG 410
AF +M G+ P ++ ++G
Sbjct: 764 AFRLKEEMTALGIVPAEVADSSIVRG 789
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 81/184 (44%), Gaps = 6/184 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ++I CR + EM GC P +TYN +L LCK + DA LL EM
Sbjct: 19 YTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMR 78
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R PD T+ I C GK D A F+ M+ + L+P + T+ I G R
Sbjct: 79 ERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDG---MCRQG 135
Query: 419 DAYKYVVLSADKYKSS---SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
D K L D + +++ YS+L H + A L EM+ G+ PN+ Y
Sbjct: 136 DLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYN 195
Query: 476 RVLK 479
++K
Sbjct: 196 SIIK 199
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 92/215 (42%), Gaps = 8/215 (3%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+ G C+ + +++F + + ++ + YN LI MCR+ D DL
Sbjct: 93 IHGYCIEGKLDKALQLFDTM--------LNQRLRPDIVTYNTLIDGMCRQGDLDKANDLW 144
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
+M P +TY+ ++ C+ GQ DA L+EM+ + P+ +TY I CR
Sbjct: 145 DDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRS 204
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
G F +M+ + P L T+ I GY + DA+K + + + + Y
Sbjct: 205 GNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTY 264
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
++L + + N A + +M G+ P+ Y
Sbjct: 265 NMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTY 299
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 84/183 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN L+ +C+ LL EMR+ G P T+ ++ C G+ A +L +
Sbjct: 51 VVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFD 110
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
ML + PD +TY I CR G D A + ++ M R + P T++ I +
Sbjct: 111 TMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKG 170
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ EDA+ ++ +K + M Y+ + + ++ N + L +MM N + P++ Y
Sbjct: 171 QVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYN 230
Query: 476 RVL 478
++
Sbjct: 231 TLI 233
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 67/171 (39%), Gaps = 15/171 (8%)
Query: 230 EKAFGFLPVLISSKALTKKGIWRVVEVLNQV-GGSCLVSGVRALIEMFSVLGLYEMAKYV 288
E AFGFL +I+ KGI + N + G C V G + K +
Sbjct: 173 EDAFGFLDEMIN------KGILPNIMTYNSIIKGYCRSGNVSK--------GQKFLQKMM 218
Query: 289 IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
+ K + YN LI + LL M + +P +TYN ++ +G
Sbjct: 219 VNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQ 278
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
+A + E+M + PD TY I G AF ++M++RG P
Sbjct: 279 EAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAP 329
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 55/124 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +IK CR + + L +M P +TYN ++ K + DA +LL M
Sbjct: 194 YNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMME 253
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD +TY + I G A F +M +G++P T+ + I G+ +
Sbjct: 254 KEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSK 313
Query: 419 DAYK 422
+A++
Sbjct: 314 EAFQ 317
>gi|449449102|ref|XP_004142304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like [Cucumis sativus]
gi|449510601|ref|XP_004163711.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like [Cucumis sativus]
Length = 849
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 89/195 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN + +CRR D G +LL EMR G EP ++ LCKNG+ +A L +M+
Sbjct: 528 YNSIFGCLCRREDTVGAIELLREMRGHGHEPWIKHSTLLVKQLCKNGRAIEASNFLADMV 587
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD ++Y + ++ K D A F + RG +P + +H IKGY +
Sbjct: 588 CEGFLPDIVSYSAAMDGLVKINKLDRALELFQDICTRGCRPDVVSHNILIKGYCKAGKVN 647
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+AY ++ S + Y+LL + KN + A LS+M + +P + Y ++
Sbjct: 648 EAYNFLHKMRVAGLVPSAVSYNLLINEWCKNGDIDKAILCLSQMNEENKKPTIISYTTLI 707
Query: 479 KHLHTSHQEHMAKCL 493
S + AK L
Sbjct: 708 NGCCNSGRPDDAKIL 722
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 82/176 (46%), Gaps = 2/176 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +NILIK C+ + L +MR G P ++YN ++ CKNG A L
Sbjct: 630 VVSHNILIKGYCKAGKVNEAYNFLHKMRVAGLVPSAVSYNLLINEWCKNGDIDKAILCLS 689
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M N P I+Y I C G+ D A +N+M ++G P T+ A + G
Sbjct: 690 QMNEENKKPTIISYTTLINGCCNSGRPDDAKILWNEMQEKGCSPNRITYMAIVHGLCKCG 749
Query: 416 RYEDAYKYV-VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
+ ++A Y + + K S + +L+ + K+N MA N+L E ++ G P+
Sbjct: 750 KPDEALVYYHSMEEKEMKPDSYVSVALIDAFISKHNFS-MAFNILKETIEKGNIPD 804
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%)
Query: 279 LGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
L L + K K E V YN +I +C + +L EM G P +TYN ++
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
LC G+ +DA LL +M+ R +P+ +T+ I + GK A +++M+KR +
Sbjct: 299 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 358
Query: 399 PRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNV 458
P + T+++ I G+ + R ++A L K + + Y+ L K +
Sbjct: 359 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMEL 418
Query: 459 LSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
EM + GL N Y ++ + +
Sbjct: 419 FREMSQRGLVGNTVTYTTLIHGFFQARE 446
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 6/197 (3%)
Query: 286 KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNG 345
+ V+K + + Y I++ +C+R D LL +M Q EP + YN ++ LC
Sbjct: 211 RMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYK 270
Query: 346 QDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
DA L EM + P+ +TY I C G++ A + M++R + P + T +
Sbjct: 271 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 330
Query: 406 AFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLAS---LHDKNNNPVMAKNVLSEM 462
A I + + +A K + YS L + +HD+ + AK++ M
Sbjct: 331 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE---AKHMFELM 387
Query: 463 MKNGLRPNVSVYRRVLK 479
+ PNV Y ++K
Sbjct: 388 ISKDCFPNVVTYNTLIK 404
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 4/202 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N LI + R L+ M GC+P +TY V+ LCK G A LL++M
Sbjct: 189 FNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKME 248
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P + Y I C + A N F +M +G++P + T+ + I+ + R+
Sbjct: 249 QGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS 308
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA + + ++ + + + +S L K V A+ + EM+K + P++ Y ++
Sbjct: 309 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 368
Query: 479 K----HLHTSHQEHMAKCLSSR 496
H +HM + + S+
Sbjct: 369 NGFCMHDRLDEAKHMFELMISK 390
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 80/183 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ILI CRR +L +M ++G EP +T N +L C + +DA L+ +M+
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD+ T+ I R + A ++MV +G QP L T+ + G +
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + ++Y+ + N A N+ +EM G+RPNV Y ++
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Query: 479 KHL 481
+ L
Sbjct: 299 RCL 301
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 88/211 (41%), Gaps = 1/211 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LIK C+ +L EM Q G T+TY ++ + + +A + +
Sbjct: 396 VVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFK 455
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M+ PD +TY I + C GK + A F + + ++P + T+ I+G
Sbjct: 456 QMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAG 515
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ ED + + K + + Y+ + S + A + EM + G P+ Y
Sbjct: 516 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYN 575
Query: 476 RVLK-HLHTSHQEHMAKCLSSRYSSLSLGSS 505
+++ HL + A+ + S +G +
Sbjct: 576 TLIRAHLRDGDKAASAELIREMRSCRFVGDA 606
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 68/161 (42%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M+ +G TY+ ++ C+ Q + A +L +M+ PD +T + C
Sbjct: 106 QMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGN 165
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+ A + QMV+ G QP T I G F R +A V K + Y
Sbjct: 166 RISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYG 225
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
++ + K + +A ++L +M + + P V +Y ++ L
Sbjct: 226 IVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDAL 266
>gi|410109899|gb|AFV61029.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
micrantha]
Length = 431
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 87/183 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ G +L EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 212 VYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 271
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G A + ++M +GL+P T+ I G
Sbjct: 272 QMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEG 331
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ A+++ + ++ Y+ L S + V A+ +L EM+ GL+P+ Y
Sbjct: 332 DLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYT 391
Query: 476 RVL 478
++
Sbjct: 392 MII 394
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 14/188 (7%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ C+ D + + + + + G P ++YN ++ + G + L M
Sbjct: 144 FFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAM 203
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
L PD TY + I C+ K D A F++M+ +GL P T I G+ R
Sbjct: 204 LASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR- 262
Query: 418 EDAYKYVVLSADKYKS--SSNML-----YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
V L+ + YK S ++L Y+ L K + A +++ EM GL+P+
Sbjct: 263 ------VDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPD 316
Query: 471 VSVYRRVL 478
Y ++
Sbjct: 317 KFTYTTLI 324
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 66/162 (40%), Gaps = 19/162 (11%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C++ D K DL+ EM G +P TY ++ CK G A E + M+
Sbjct: 285 YNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMI 344
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
N D + Y I C+ G+ A +M+ GL+P T+ I +
Sbjct: 345 QENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEF------- 397
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNP-VMAKNVL 459
D +K S LL +H + P V+ NVL
Sbjct: 398 ------CKKGDVWKGS-----KLLKEMHRDGHAPSVVTYNVL 428
>gi|255660956|gb|ACU25647.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 376
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 127/287 (44%), Gaps = 12/287 (4%)
Query: 201 VIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQV 260
+ DN G++D+ ++ +L+ + + + +G L + K + V+E+ Q
Sbjct: 69 LFDN-GKVDEVISIWELMKESGFVE---DSITYGILVHGFCKNGYSDKSL-HVLEMAEQK 123
Query: 261 GGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGP 315
GG A+I + A YV+ + V YN LI + F+
Sbjct: 124 GGVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSGCKPNVHVYNTLINGLVGASKFEDA 183
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
+ EM + C P +TYN ++ LCKN +A L++E+L + P ITY + +
Sbjct: 184 IRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGVITYSMLMKG 243
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
C K + A +NQ+ +G +P + H I G + + A + +++K +
Sbjct: 244 LCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALS-LYFDMNRWKCAP 302
Query: 436 NML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
N++ ++ L K+ + A + + +++NGL P++ Y LK L
Sbjct: 303 NLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGL 349
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 97/226 (42%)
Query: 282 YEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+E+ + + + R VS +NI+++ + + M++ G ++TY ++
Sbjct: 45 FELWEMMGSEGNRSVSSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGF 104
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
CKNG + +LE + DA Y I C+ D A N M+K G +P +
Sbjct: 105 CKNGYSDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSGCKPNV 164
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
+ I G ++EDA + + S + + Y+ L + KN A N++ E
Sbjct: 165 HVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKE 224
Query: 462 MMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSVE 507
++ GL P V Y ++K L H+ A L ++ +S V+
Sbjct: 225 LLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQ 270
>gi|326507622|dbj|BAK03204.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 435
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 82/166 (49%)
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
R++L ++G P ++YN +L LC A A +L+EMLGR P +T+ +
Sbjct: 146 RNMLPRAAKLGVRPNAVSYNIILKGLCGRDGSAGARVVLDEMLGRGVRPTVVTFNTLVGA 205
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
+C+ G A +MV+RG+ P T++ ++G R +DA K + + +
Sbjct: 206 ACQEGDVGAAEQLKEEMVRRGVSPNAVTYSLLMRGLCDAGRQDDAKKLMFDMEYQGCQTE 265
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ Y +L S + + + + +LS+M K L P+ + Y ++K L
Sbjct: 266 AVNYGVLMSAYARQGDVDSVRGLLSDMRKRKLGPDDASYNVLIKCL 311
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 80/181 (44%), Gaps = 7/181 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNI++K +C R G R +L EM G P +T+N ++G C+ G A +L EEM+
Sbjct: 164 YNIILKGLCGRDGSAGARVVLDEMLGRGVRPTVVTFNTLVGAACQEGDVGAAEQLKEEMV 223
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R P+A+TY + + C G+ D A M +G Q + + Y R
Sbjct: 224 RRGVSPNAVTYSLLMRGLCDAGRQDDAKKLMFDMEYQGCQTEAVNYGVLMSAY---ARQG 280
Query: 419 DAYKYVVLSADKYK---SSSNMLYSLLASLHDKNNNPVMAKNVLSEM-MKNGLRPNVSVY 474
D L +D K + Y++L + A L EM +K+G P+ + Y
Sbjct: 281 DVDSVRGLLSDMRKRKLGPDDASYNVLIKCLCDSGKVEEAHKALVEMQLKDGTVPSAATY 340
Query: 475 R 475
R
Sbjct: 341 R 341
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM- 357
Y +L+ R+ D R LL +MR+ P +YN ++ LC +G+ +A + L EM
Sbjct: 269 YGVLMSAYARQGDVDSVRGLLSDMRKRKLGPDDASYNVLIKCLCDSGKVEEAHKALVEMQ 328
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
L P A TY + CR G F + FN M+ G +P T KG
Sbjct: 329 LKDGTVPSAATYRVLADGCCRAGDFGLGLRVFNAMLASGHRPLGHTFKHLAKG 381
>gi|255661002|gb|ACU25670.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 376
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 2/184 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI + F+ + EM V C P +TYN ++ LCKN +A +L+++ML
Sbjct: 167 YNTLINGLVGASKFEDAIRVFREMGXVRCSPTIITYNTLINGLCKNEMFGEAYDLVKDML 226
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ +P ITY + + C K + A +NQ++ +G +P + H I G + +
Sbjct: 227 EKGLNPSVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQ 286
Query: 419 DAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
A + +++K + N++ ++ L K+ + A + + ++NGL P++ Y
Sbjct: 287 LALS-LYFDMNRWKCAPNLVTHNTLMEGFYKDGDIRNALVIWARXLRNGLEPDIISYNIT 345
Query: 478 LKHL 481
LK L
Sbjct: 346 LKGL 349
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 96/226 (42%)
Query: 282 YEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+E+ + + + R VS +NI+++ + + + M++ ++T+ ++
Sbjct: 45 FELWEMMGNEGNRSVSSFNIMMRGLFDKGKVDEVISIWELMKKSDFVEDSITFGILVHGF 104
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
CKNG + +LE + DA Y I C+ D A N M+K G +P
Sbjct: 105 CKNGYINKSLHVLEMAZXKGGVLDAFAYSAMINGLCKEANLDKAVXVLNDMIKSGCKPNA 164
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
+ I G ++EDA + S + + Y+ L + KN A +++ +
Sbjct: 165 HVYNTLINGLVGASKFEDAIRVFREMGXVRCSPTIITYNTLINGLCKNEMFGEAYDLVKD 224
Query: 462 MMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSVE 507
M++ GL P+V Y ++K L H+ A L ++ S V+
Sbjct: 225 MLEKGLNPSVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQ 270
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 89/217 (41%), Gaps = 5/217 (2%)
Query: 274 EMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLT 333
E+ S+ L + + +V E +++ IL+ C+ +L G
Sbjct: 77 EVISIWELMKKSDFV----EDSITF-GILVHGFCKNGYINKSLHVLEMAZXKGGVLDAFA 131
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
Y+ ++ LCK A +L +M+ C P+A Y I KF+ A F +M
Sbjct: 132 YSAMINGLCKEANLDKAVXVLNDMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMG 191
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPV 453
P + T+ I G + +AY V +K + S + YS+L ++
Sbjct: 192 XVRCSPTIITYNTLINGLCKNEMFGEAYDLVKDMLEKGLNPSVITYSMLMKGLCLDHKVE 251
Query: 454 MAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
A + ++++ G +P+V ++ ++ L + + +A
Sbjct: 252 RALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQLA 288
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 59/142 (41%), Gaps = 8/142 (5%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
G CL V +++++ + + K + V +NILI +C + L +
Sbjct: 243 GLCLDHKVERALQLWN--------QVISKGFKPDVQMHNILIHGLCSVGKTQLALSLYFD 294
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M + C P +T+N ++ K+G +A + L PD I+Y I + C +
Sbjct: 295 MNRWKCAPNLVTHNTLMEGFYKDGDIRNALVIWARXLRNGLEPDIISYNITLKGLCSCNR 354
Query: 382 FDVAFNFFNQMVKRGLQPRLAT 403
A F + V++ + P T
Sbjct: 355 ICDAILFLHDAVRKKIVPTKIT 376
>gi|115446101|ref|NP_001046830.1| Os02g0470000 [Oryza sativa Japonica Group]
gi|47497415|dbj|BAD19472.1| putative PPR protein [Oryza sativa Japonica Group]
gi|47497530|dbj|BAD19582.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113536361|dbj|BAF08744.1| Os02g0470000 [Oryza sativa Japonica Group]
Length = 649
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 13/210 (6%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEM-RQV 325
LI+M GL A V ++ R + Y+ L+ +G ++ +++ R +
Sbjct: 435 LIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSE----QGLVEVAIQLFRSM 490
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
C+P +YN VL LC+ + DA EL+ EM+G++C P+ +T+ I I C+ G D A
Sbjct: 491 PCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRA 550
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
QM G P + T+ A I G+ R +DA K +LS K + S L L
Sbjct: 551 IEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALK--LLSTMSCKPDAISYNSTLKGL 608
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ A+ +++EM++N PN ++
Sbjct: 609 C-RAERWQDAEELVAEMLRNKCTPNEVTFK 637
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 101/232 (43%), Gaps = 8/232 (3%)
Query: 252 RVVEVLNQV---GGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSY--YNILIKEM 306
R V++L+Q+ G + V LI FS G + A ++ K + YN +K +
Sbjct: 243 RAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCKPNTVCYNAALKGL 302
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
C ++ +L+ EM + GC P T++ ++ LC+N A E+LE+M C PD
Sbjct: 303 CIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDT 362
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
+ Y I I G+ D A N MV +P A +KG+ R+ DA + +
Sbjct: 363 VNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQ 419
Query: 427 SADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
M +++L + +N A V +M + P++ Y +L
Sbjct: 420 MFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLL 471
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 3/176 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N ++K CR + +L+ +M + C I +T+N ++ +LC+NG A ++ E+M
Sbjct: 397 FNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMP 456
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C PD +TY + G +VA F M +P + ++ A +KG R+E
Sbjct: 457 RYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSM---PCKPDIFSYNAVLKGLCRAARWE 513
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
DA + + K + + +++L + + A VL +M G P++ Y
Sbjct: 514 DAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTY 569
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 3/183 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++K +C ++ +L+ EM + C P +T+ + C+NG A +LL++M
Sbjct: 193 YNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMP 252
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C PD + Y I G D A + N M+ +P + A +KG I R+E
Sbjct: 253 RYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNAALKGLCIAERWE 309
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
D + + K S + +S+L S +NN A VL +M K G P+ Y ++
Sbjct: 310 DIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIII 369
Query: 479 KHL 481
L
Sbjct: 370 NSL 372
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 6/131 (4%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L +M KY E YNI+I + R D L + + C+P L +N VL
Sbjct: 350 LEQMEKY---GCEPDTVNYNIIINSLSERGRVD---DALRLLNSMVCKPDALGFNAVLKG 403
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
C+ + DA EL+ +M +C +T+ I I C+ G + A F QM + P
Sbjct: 404 FCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPD 463
Query: 401 LATHAAFIKGY 411
+ T+++ + G+
Sbjct: 464 IVTYSSLLNGF 474
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 64/157 (40%), Gaps = 8/157 (5%)
Query: 273 IEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGC 327
I F GL + A ++ + R V Y+ LI + DLL M C
Sbjct: 232 IRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---C 288
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
+P T+ YN L LC + D EL+ EM+ + C P+ T+ + I C+ D A
Sbjct: 289 KPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVE 348
Query: 388 FFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV 424
QM K G +P + I R +DA + +
Sbjct: 349 VLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLL 385
>gi|242058297|ref|XP_002458294.1| hypothetical protein SORBIDRAFT_03g030760 [Sorghum bicolor]
gi|241930269|gb|EES03414.1| hypothetical protein SORBIDRAFT_03g030760 [Sorghum bicolor]
Length = 534
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 88/185 (47%), Gaps = 6/185 (3%)
Query: 296 VSYYNILIKEMCR--RCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACEL 353
+ YN+L+K C D K D L R + +P +YN ++ LC+ G+ A A E+
Sbjct: 163 AATYNVLLKAQCSDAAADIK---DALRLFRNIP-KPDVCSYNTIIDGLCRRGRLAAALEM 218
Query: 354 LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
EM+G+ P +TY I + R G FD A F++M +RG+ P L T+++ I G
Sbjct: 219 FSEMVGKCIAPTVVTYTTLIHWLAREGCFDDALKIFDEMGRRGVSPNLVTYSSLIDGLCK 278
Query: 414 FYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
R A + + + K + + YS + K + A VL M G +P+ +
Sbjct: 279 GGRAASALELMDRMIKEKKLPNTITYSSVIDGLCKEHMLSEAMEVLDRMRLQGRKPDAGL 338
Query: 474 YRRVL 478
+ +++
Sbjct: 339 FGKLI 343
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 7/189 (3%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN +I +CRR ++ EM P +TY ++ L + G DA ++ +
Sbjct: 196 VCSYNTIIDGLCRRGRLAAALEMFSEMVGKCIAPTVVTYTTLIHWLAREGCFDDALKIFD 255
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM R P+ +TY I C+ G+ A ++M+K P T+++ I G +
Sbjct: 256 EMGRRGVSPNLVTYSSLIDGLCKGGRAASALELMDRMIKEKKLPNTITYSSVIDGLCKEH 315
Query: 416 RYEDAYKYV-VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+A + + + K + + L+ L D V A N L EM+ G+ PN
Sbjct: 316 MLSEAMEVLDRMRLQGRKPDAGLFGKLIVGLCDAGRA-VEAANYLDEMILAGIEPN---- 370
Query: 475 RRVLKHLHT 483
RV LHT
Sbjct: 371 -RVTWSLHT 378
>gi|125548275|gb|EAY94097.1| hypothetical protein OsI_15870 [Oryza sativa Indica Group]
Length = 554
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 74/147 (50%)
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
+P TY ++G C+ G+ A A LL M+ + P+ TY I C+ G FD AF
Sbjct: 311 KPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFE 370
Query: 388 FFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHD 447
N+M + G P + T+ A I G+ + ++AYK + ++ + + Y++L + H
Sbjct: 371 LMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHC 430
Query: 448 KNNNPVMAKNVLSEMMKNGLRPNVSVY 474
K + A ++ M++NG P++ Y
Sbjct: 431 KQGHITYALDLFDRMVENGCCPDIEAY 457
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 1/180 (0%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
++++ +C + FK + M ++G P + Y + LCK A +LEEM+G
Sbjct: 212 TVVVRSLCEKGRFKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVG 271
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK-RGLQPRLATHAAFIKGYFIFYRYE 418
R P+ T+ I C++G + AF F +++K +P + T+ I GY +
Sbjct: 272 RGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLA 331
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A +V ++ + Y+ L H K + A ++++M + G PN+ Y V+
Sbjct: 332 RAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVI 391
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 8/207 (3%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+GG C G A EM V + V + + + Y LI C+ F +L+
Sbjct: 321 IGGYCR-EGKLARAEMLLV-------RMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELM 372
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
+M+Q G P TYN V+ CK G+ +A ++L + D ITY I I C+
Sbjct: 373 NKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQ 432
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
G A + F++MV+ G P + + + I Y + E++ K+ + Y
Sbjct: 433 GHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTY 492
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNG 466
+ + + + K MA V M++NG
Sbjct: 493 TSMIAGYCKVGRSTMALRVFERMVQNG 519
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 78/178 (43%), Gaps = 3/178 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ L+ CR + LL M + G T V+ LC+ G+ D E ML
Sbjct: 176 FRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRML 235
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ + Y +I C+ AF+ +MV RGL+P + TH I G E
Sbjct: 236 EMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTE 295
Query: 419 DAYKYV--VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
A++ ++ + YK + + Y+++ + + A+ +L M++ GL+PN + Y
Sbjct: 296 RAFRLFLKLIKSSSYKPNVHT-YTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTY 352
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 68/165 (41%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
D+++EMR G T N+VL V + G A ++ + M PD ++ +V
Sbjct: 124 DMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVC 183
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
CR GK + M + G AT ++ R++D ++ + +
Sbjct: 184 CREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLEMGTPPNV 243
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ Y+ K A +VL EM+ GL+PNV + ++ L
Sbjct: 244 VNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 288
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 93/213 (43%)
Query: 279 LGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
L L + K K E V YN +I +C+ L +M G P TYN ++
Sbjct: 238 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLI 297
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
LC G+ +DA LL M+ R +P+ +T+ I + GK A +++M+KR +
Sbjct: 298 SCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357
Query: 399 PRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNV 458
P + T+++ I G+ + R ++A L K + + Y+ L K +
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417
Query: 459 LSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
EM + GL N Y +++ L + MA+
Sbjct: 418 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 86/183 (46%), Gaps = 4/183 (2%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L+ +M Q GC+P +TY V+ LCK G A LL++M D + Y I C
Sbjct: 207 LVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLC 266
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ D AF FN+M +G++P + T+ + I + R+ DA + + ++ + + +
Sbjct: 267 KYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVV 326
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK----HLHTSHQEHMAKCL 493
+S L K V A+ + EM+K + P++ Y ++ H +HM + +
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 386
Query: 494 SSR 496
S+
Sbjct: 387 ISK 389
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 84/184 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LIK C+ + +L EM Q G T+TYN ++ L + G A ++ +
Sbjct: 395 VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFK 454
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M+ PD ITY I + C+ GK + A F + K ++P + T+ I+G
Sbjct: 455 KMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 514
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ ED + + K + ++Y+ + S + A + EM ++G P+ Y
Sbjct: 515 KVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYN 574
Query: 476 RVLK 479
+++
Sbjct: 575 TLIR 578
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 70/141 (49%), Gaps = 10/141 (7%)
Query: 280 GLYEMAKY--VIKKTER----KVSY----YNILIKEMCRRCDFKGPRDLLVEMRQVGCEP 329
+ +M K+ VI ER ++SY YNILI CRR +L +M ++G EP
Sbjct: 89 AIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEP 148
Query: 330 ITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFF 389
+T + +L C + + +DA L+++M+ PD +T+ I K A
Sbjct: 149 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALV 208
Query: 390 NQMVKRGLQPRLATHAAFIKG 410
+QMV+RG QP L T+ A + G
Sbjct: 209 DQMVQRGCQPDLVTYGAVVNG 229
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 78/184 (42%), Gaps = 6/184 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ++ +C+R D LL +M + E + YN ++ LCK DA L +M
Sbjct: 223 YGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKME 282
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD TY I C G++ A + M++R + P + T +A I + +
Sbjct: 283 TKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLV 342
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLAS---LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+A K + YS L + +HD+ + AK++ M+ PNV Y
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE---AKHMFELMISKDCFPNVVTYN 399
Query: 476 RVLK 479
++K
Sbjct: 400 TLIK 403
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 88/218 (40%), Gaps = 15/218 (6%)
Query: 271 ALIEMFSVLG-LYEMAKYVIKKTERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI+ F G L E K + +R + Y+ LI C + + M
Sbjct: 330 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 389
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
C P +TYN ++ CK + + EL EM R + +TY I + G D+A
Sbjct: 390 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 449
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM-----LYS 440
F +MV G+ P + T++ + G + + E A L +Y S M Y+
Sbjct: 450 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKA-----LVVFEYLQKSKMEPDIYTYN 504
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
++ K ++ + G++PNV +Y ++
Sbjct: 505 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 542
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 6/167 (3%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L EM Q P + +N +L + K + L E M D +Y I I C
Sbjct: 67 LFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFC 126
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSAD-KYKSSSN 436
R + +A +M+K G +P + T ++ + GY R DA V + YK +
Sbjct: 127 RRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTV 186
Query: 437 MLYSLLAS--LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+L+ LH+K + V ++ +M++ G +P++ Y V+ L
Sbjct: 187 TFNTLIHGLFLHNKASEAVA---LVDQMVQRGCQPDLVTYGAVVNGL 230
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 41/102 (40%)
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
K E + YNI+I+ MC+ + DL + G +P + Y ++ C+ G +A
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 554
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
L EM PD+ Y I R G + +M
Sbjct: 555 DALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEM 596
>gi|255660810|gb|ACU25574.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 418
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 84/183 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ +L EM G P +T+ ++ CKNG+ A E+
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYX 265
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G A + ++M +GL+P T+ I G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLIDGSCKEG 325
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A++Y + + Y+ L S + V A+ +L EM+ GL+P + Y
Sbjct: 326 DLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 385
Query: 476 RVL 478
++
Sbjct: 386 MII 388
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 55/115 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +N L+ + D L M+ G +P TY+ ++ LCK + DA EL +
Sbjct: 171 VVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFD 230
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
EML P+ +T+ I C+ G+ D+A + QM+ + L P L T+ I G
Sbjct: 231 EMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYG 285
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 75/181 (41%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ + + + + + + + G P +++N ++ K G + L M
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
PD TY + I C+ K D A F++M+ GL P T I G+ R
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRV 257
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ A + + S + Y+ L K + A+++ EM GL+P+ Y +
Sbjct: 258 DLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTL 317
Query: 478 L 478
+
Sbjct: 318 I 318
>gi|224085950|ref|XP_002307751.1| predicted protein [Populus trichocarpa]
gi|222857200|gb|EEE94747.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 88/203 (43%), Gaps = 8/203 (3%)
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
K E V Y L++ CR + + EM+ G +P TY+ V+ LC+ GQ A
Sbjct: 193 KFEPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRA 252
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
++ EML C P++ITY + + G+ + +NQM + G +P T+ I+
Sbjct: 253 HDIFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNFLIET 312
Query: 411 YFIFYRYEDAYKYVVLSADK----YKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNG 466
+ EDA K + L A K S+ N L+ +A L D N A + +M +
Sbjct: 313 HCKDENLEDAIKVIGLMAKKGCAPNASTFNTLFGCIAKLGDVN----AAHRMYKKMKELN 368
Query: 467 LRPNVSVYRRVLKHLHTSHQEHM 489
N Y ++K S M
Sbjct: 369 CEANTVTYNTLMKMFVASKSTDM 391
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 6/134 (4%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPIT 331
L + V+GL MAK K S +N L + + D + +M+++ CE T
Sbjct: 319 LEDAIKVIGL--MAK---KGCAPNASTFNTLFGCIAKLGDVNAAHRMYKKMKELNCEANT 373
Query: 332 LTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQ 391
+TYN ++ + + +L EM P+ TY++ I C +G ++ A+ FF +
Sbjct: 374 VTYNTLMKMFVASKSTDMVLKLKTEMDENKIEPNVNTYKVLITMYCGMGHWNNAYKFFRE 433
Query: 392 MV-KRGLQPRLATH 404
M+ ++ L+P L +
Sbjct: 434 MIDEKCLRPSLPVY 447
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 55/125 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI+ C+ + + ++ M + GC P T+N + G + K G A + ++M
Sbjct: 306 YNFLIETHCKDENLEDAIKVIGLMAKKGCAPNASTFNTLFGCIAKLGDVNAAHRMYKKMK 365
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
NC + +TY + D+ +M + ++P + T+ I Y +
Sbjct: 366 ELNCEANTVTYNTLMKMFVASKSTDMVLKLKTEMDENKIEPNVNTYKVLITMYCGMGHWN 425
Query: 419 DAYKY 423
+AYK+
Sbjct: 426 NAYKF 430
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 62/153 (40%), Gaps = 1/153 (0%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M C+P + ++ ++ +LC+ + + A E + L PD I Y + CR G
Sbjct: 155 MEDYNCKPDKIAFSILISILCRERRASQAQEFFDS-LKDKFEPDVIVYTNLVRGWCRAGN 213
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
A F +M G++P + T++ I + A+ D +++ Y+
Sbjct: 214 ISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDIFAEMLDAGCQPNSITYNS 273
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
L +H K V ++M + G P+ Y
Sbjct: 274 LMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTY 306
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 58/146 (39%), Gaps = 2/146 (1%)
Query: 343 KNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLA 402
+ G A+A M NC PD I + I I CR + A FF+ + K +P +
Sbjct: 141 RAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRERRASQAQEFFDSL-KDKFEPDVI 199
Query: 403 THAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM 462
+ ++G+ +A + + YS++ + A ++ +EM
Sbjct: 200 VYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDIFAEM 259
Query: 463 MKNGLRPNVSVYRRVLK-HLHTSHQE 487
+ G +PN Y +++ H+ E
Sbjct: 260 LDAGCQPNSITYNSLMRIHVKAGRTE 285
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 109/259 (42%), Gaps = 24/259 (9%)
Query: 175 VSALCFLKYMREIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFG 234
VSAL FL M + F N +++ID + +E +++N + + LN +
Sbjct: 389 VSALEFLDEM--VKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYN 446
Query: 235 FLPVLISSKALTKKGIWRVVEVLNQVGG-------------SCLVSGVRALIEMFSVLGL 281
L AL K G ++ + L G + L+ G+ +M LGL
Sbjct: 447 CL-----IGALCKDG--KIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGL 499
Query: 282 YEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
Y +++ YN LI R + L+ EMR GC +TYN ++ L
Sbjct: 500 YR--DMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKAL 557
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
CK G L+E+M G P + I I CR GK + A F M++RGL P +
Sbjct: 558 CKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDI 617
Query: 402 ATHAAFIKGYFIFYRYEDA 420
T+ + I G R+++A
Sbjct: 618 VTYNSLINGLCKMGRFQEA 636
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 93/202 (46%), Gaps = 12/202 (5%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +LI + LL EM +GCEP T+N V+ LCK G+ +A +L + ML
Sbjct: 238 YQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRML 297
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R+ DA+ + CR+GK D A M+ + P + I GY + R+E
Sbjct: 298 LRDFTADALIQGYLMHGLCRMGKVDEA----RAMLSKIPNPNTVLYNTLINGYVVSGRFE 353
Query: 419 DA----YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+A YK +V++ + + + ++++ K V A L EM+K G PNV Y
Sbjct: 354 EAKDLLYKNMVIAGFEPDAFT---FNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITY 410
Query: 475 RRVLKHL-HTSHQEHMAKCLSS 495
++ H E +K ++S
Sbjct: 411 TILIDGFCKQGHFEEASKVVNS 432
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 3/144 (2%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L EM K K E V Y ILI C++ F+ ++ M G T+ YN ++G
Sbjct: 395 LDEMVK---KGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGA 451
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
LCK+G+ DA ++ EM + C PD T+ I C+ K + A + M+ G+
Sbjct: 452 LCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIAN 511
Query: 401 LATHAAFIKGYFIFYRYEDAYKYV 424
T+ I + + A K V
Sbjct: 512 TVTYNTLIHAFLRLELIQQADKLV 535
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 6/146 (4%)
Query: 271 ALIEMFSVLGLYEMAK------YVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQ 324
LI + V G +E AK VI E +NI+I +C++ + L EM +
Sbjct: 341 TLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVK 400
Query: 325 VGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
G EP +TY ++ CK G +A +++ M + + + Y I C+ GK
Sbjct: 401 KGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQD 460
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKG 410
A + +M +G +P + T + I G
Sbjct: 461 ALQMYGEMSSKGCKPDIYTFNSLIYG 486
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 5/181 (2%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL-EEMLGR 360
L+ +CR R +L ++ P T+ YN ++ +G+ +A +LL + M+
Sbjct: 311 LMHGLCRMGKVDEARAMLSKIPN----PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIA 366
Query: 361 NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
PDA T+ I I C+ G A F ++MVK+G +P + T+ I G+ +E+A
Sbjct: 367 GFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEA 426
Query: 421 YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKH 480
K V + K S + + Y+ L K+ A + EM G +P++ + ++
Sbjct: 427 SKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYG 486
Query: 481 L 481
L
Sbjct: 487 L 487
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 9/203 (4%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +LI ++ +FK LL +M+ GC + ++ K G A LL +M
Sbjct: 97 YYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMW 156
Query: 359 GRNC-HPDAITY----EIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
G C P +Y EI + +C VA N F M+ RG+ P + T +K + +
Sbjct: 157 GVYCFEPTFKSYNVVLEILVAGNCP----KVAPNVFYDMLSRGISPTVYTFGVVMKAFCM 212
Query: 414 FYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
+ A + ++++Y +L +NN A +L EM G P+V
Sbjct: 213 VNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQT 272
Query: 474 YRRVLKHLHTSHQEHMAKCLSSR 496
+ V+ L + + H A L R
Sbjct: 273 FNDVIHGLCKAGRIHEAAKLHDR 295
>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 113/288 (39%), Gaps = 31/288 (10%)
Query: 194 NSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRV 253
N I + +ID C + D E R + + N+ F L + K L K G
Sbjct: 196 NVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGF--- 252
Query: 254 VEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFK 313
L E + GL+ + YN L+ E C
Sbjct: 253 -----------------DLFEKMKINGLFP-----------NLYTYNCLMNEYCGEGKIC 284
Query: 314 GPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFI 373
DL EMR+ G E +TYN ++G +C+ + +A +L+++M P+ ITY I
Sbjct: 285 RAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLI 344
Query: 374 VYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKS 433
C VG D A + +Q+ GL P L T+ I+GY ++ + S
Sbjct: 345 GGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGIS 404
Query: 434 SSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
S + ++L + + A + S M K GL P+V VY ++ L
Sbjct: 405 PSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGL 452
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 99/229 (43%), Gaps = 4/229 (1%)
Query: 281 LYEMAKYVIKKTERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNY 336
++E K V + + VS YN LI C + LL +++ G P +TYN
Sbjct: 318 VWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNI 377
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
++ K G +L EM GR P +T + I R+ + + AF ++ M K G
Sbjct: 378 LIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFG 437
Query: 397 LQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAK 456
L P + + I G + +++ K + + S+++Y+ + + K +N A
Sbjct: 438 LVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRAL 497
Query: 457 NVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSS 505
+L EM GL PNV+ Y ++ L + A+ L + L L S
Sbjct: 498 RLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPS 546
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 79/185 (42%), Gaps = 19/185 (10%)
Query: 231 KAFGFLPVLISSKAL----TKKGIWRVVEVL-----------NQVGGSCLVSGVRALIEM 275
K+ G P L++ L +K G W+ V L ++V + L+ L EM
Sbjct: 364 KSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEM 423
Query: 276 FSVLGLYE-MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
+Y M K+ + V Y +LI +C + + K L M ++ EP + Y
Sbjct: 424 EKAFQIYSSMEKFGLVP---DVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIY 480
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N ++ CK A LL EM + P+ +Y I C+ GK++ A ++M++
Sbjct: 481 NTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIE 540
Query: 395 RGLQP 399
L+P
Sbjct: 541 LQLKP 545
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 89/237 (37%), Gaps = 39/237 (16%)
Query: 282 YEMAKYVIKKTERKVSY----YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYV 337
+E A + + +V + + I+IK C + LL ++ +G P + Y +
Sbjct: 144 FEKAWLFFNELKERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTL 203
Query: 338 LGVLCKNGQ-----------------------------------DADACELLEEMLGRNC 362
+ CKNG D +L E+M
Sbjct: 204 IDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGL 263
Query: 363 HPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
P+ TY + C GK AF+ F++M +RG++ + T+ I G R +A K
Sbjct: 264 FPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEK 323
Query: 423 YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
V S + + Y+ L N A ++L ++ NGL P++ Y +++
Sbjct: 324 LVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIE 380
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 31/169 (18%)
Query: 198 CSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVL 257
C+++ID RL + E +Q+ + + FG +P + L
Sbjct: 410 CTVLIDAYVRLQEME---------KAFQIYSSMEKFGLVPDVYVYGVL------------ 448
Query: 258 NQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRD 317
+ G C+ ++ ++F +G EM E YN +I C+ +
Sbjct: 449 --IHGLCMKGNMKESSKLFRSMG--EM------HVEPSDVIYNTMIHGYCKEDNSYRALR 498
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
LL EM G P +Y+ ++GVLCK+G+ +A LL++M+ P A
Sbjct: 499 LLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSA 547
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 15/205 (7%)
Query: 300 NILIKEMCRRCDFKGPRDLLVE-MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
N L+K +C D+LV+ M ++GC P ++YN +L C + +A ELL M
Sbjct: 133 NQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMA 192
Query: 359 ---GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF--- 412
GR+C P+ ++Y I I G+ D A+N F +M+ RG+QP + T+ I G
Sbjct: 193 DSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQ 252
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
+ R E ++ ++ DK N Y+ L + +L EM +GL+P+
Sbjct: 253 VVDRAEGVFQQMI---DKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCY 309
Query: 473 VYRRVLKHLHTSHQEHMAKCLSSRY 497
Y +L +L + +C +R+
Sbjct: 310 TYGSLLNYLCNN-----GRCREARF 329
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 95/207 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V ++N ++ +C + + L+ M +VG P ++Y ++G C G+ +A + L+
Sbjct: 483 VVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLD 542
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
ML PD TY + CR G+ D A+ F +M++ G+ P + T++ + G F
Sbjct: 543 VMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTR 602
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R+ +A + + K + +Y+++ + KNN A + + + ++ +
Sbjct: 603 RFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFN 662
Query: 476 RVLKHLHTSHQEHMAKCLSSRYSSLSL 502
++ L S + A L + SS L
Sbjct: 663 IMIGALFKSGRNEDAMHLFATISSYGL 689
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 5/183 (2%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEM---RQVGCEPITLTYNYVLGVLCKNGQDADACE 352
V YN L+K C + +LL M + C P ++Y V+ GQ A
Sbjct: 165 VVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYN 224
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
L EM+ R P+ +TY I C+ D A F QM+ +G++P T+ I GY
Sbjct: 225 LFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYL 284
Query: 413 IFYRYEDAYKYV-VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
++++ + + +SA K SLL L + N A+ + M++ G++PNV
Sbjct: 285 SIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCN-NGRCREARFLFDSMIRKGIKPNV 343
Query: 472 SVY 474
++Y
Sbjct: 344 AIY 346
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 108/285 (37%), Gaps = 41/285 (14%)
Query: 214 MRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALI 273
M LLN + + F + + KA+ + + + + Q G S V ALI
Sbjct: 362 MHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAM-HIFNKMKQQGLSPDVVNYGALI 420
Query: 274 EMFSVLGLYEMA-----KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCE 328
+ LG + A + + + + +N L+ +C ++ ++ EM G
Sbjct: 421 DALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIR 480
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P + +N +L LC GQ A L++ M P I+Y I C VG+ D A
Sbjct: 481 PDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKS 540
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
+ M+ GL+P T+ + GY R +DAY
Sbjct: 541 LDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAY--------------------------- 573
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
V EM++NG+ P V Y +L L T+ + AK L
Sbjct: 574 --------GVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKEL 610
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 85/192 (44%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
+ + V Y +I +C+ + +M G +P TYN ++ G+ +
Sbjct: 232 RGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKE 291
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
+LEEM PD TY + Y C G+ A F+ M+++G++P +A + I
Sbjct: 292 VVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIH 351
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
GY + + + L + S + +++++ + + K A ++ ++M + GL P
Sbjct: 352 GYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSP 411
Query: 470 NVSVYRRVLKHL 481
+V Y ++ L
Sbjct: 412 DVVNYGALIDAL 423
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 80/204 (39%), Gaps = 35/204 (17%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K + V+ Y ILI + DLL M + G P +N + K +
Sbjct: 337 KGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDE 396
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A + +M + PD + Y I C++G+ D A FNQM+ G+ P +
Sbjct: 397 AMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNI-------- 448
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
F+F ++ Y + + DK++ AK EM+ G+RP
Sbjct: 449 --FVF----NSLVYGLCTVDKWEK---------------------AKEFYFEMLNQGIRP 481
Query: 470 NVSVYRRVLKHLHTSHQEHMAKCL 493
+V + +L +L T Q A+ L
Sbjct: 482 DVVFFNTILCNLCTKGQVMKAQRL 505
>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
Length = 603
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 116/259 (44%), Gaps = 11/259 (4%)
Query: 228 LNEKAFGFLPVLISSKALTKKGIW---RVVEV---LNQVGGSCLVSGVRALIEMFSVLGL 281
++ F + S K T + +W R+V++ N + +C++ G L + S+
Sbjct: 238 VDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEG---LCKRGSIKQA 294
Query: 282 YEMAKYVIKKTERKVSY-YNILIKEMCRR-CDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
+EM + ++ K + Y + LI +C++ K R L +R +P LTY ++
Sbjct: 295 FEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMIS 354
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
C+ + A LL M + P+ TY I C+ G F+ A++ N M G P
Sbjct: 355 GYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSP 414
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
L T+ A + G R ++AYK + Y++L S H K N A +
Sbjct: 415 NLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALF 474
Query: 460 SEMMKNGLRPNVSVYRRVL 478
++M+K G++P++ Y ++
Sbjct: 475 NKMLKIGIQPDIHSYTTLI 493
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 74/171 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++ +C+R + +L + Q G +P TYN ++ CK A L +ML
Sbjct: 419 YNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKML 478
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD +Y I CR + + FF + V+ G+ P T+ + I GY
Sbjct: 479 KIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLT 538
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
A K+ +D + ++ Y + S K + A+++ M++ GL P
Sbjct: 539 LAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVP 589
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 76/175 (43%), Gaps = 10/175 (5%)
Query: 312 FKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEI 371
K ++++EM G P T T N+++ V + G A L EEM R PD+I+Y +
Sbjct: 151 LKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRV 210
Query: 372 FIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI-----KGYFIFYRYEDAYKYVVL 426
+V C++G A + + M++RG AT I KGY A Y
Sbjct: 211 MVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGY-----TTRALWYFRR 265
Query: 427 SADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
D + + ++ + K + A +L EM+ G +PNV + ++ L
Sbjct: 266 LVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGL 320
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V YN L +CR + LL M + G P +TY ++ + CK G +A
Sbjct: 339 ELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARR 398
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
L EM G+ P +TY + + + G A F +M K+GL P + T+A+ + G+
Sbjct: 399 LFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHC 458
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
+ + + A K + + + Y+ L S K A + +M+K GL P+ S
Sbjct: 459 VNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDS 518
Query: 473 VYRRVLKHLHTSHQEHM 489
+Y ++ LHT +++ +
Sbjct: 519 LYSALVGSLHTDNRKDI 535
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 118/286 (41%), Gaps = 14/286 (4%)
Query: 198 CSLVIDN---CGRLDDYETMRQLLNDFNVYQVCLNEKAFG-FLPVLISSKALTKKGIWRV 253
S+V+D GR+DD R LL++ + V LN + L + K + + +
Sbjct: 135 ASVVVDGFCKSGRVDD---ARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDAR--VQEL 189
Query: 254 VEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCR 308
+E++ G V L++ S G + V+ + + K V Y +I CR
Sbjct: 190 LEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCR 249
Query: 309 RCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAIT 368
+ + ++ E G EP TY ++ CK GQ A LL +M GR + I
Sbjct: 250 AGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQII 309
Query: 369 YEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSA 428
+ I CR G D A M K G++ + T+ G R +A + +
Sbjct: 310 FNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMI 369
Query: 429 DKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+K + + Y+ L S+H K + V A+ + EM G P+V Y
Sbjct: 370 EKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTY 415
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 98/240 (40%), Gaps = 8/240 (3%)
Query: 250 IWRVVEVLNQVGGSCLVSGVRA---LIEMFSVLGLYEMAKYVIKKTE-RKVSY----YNI 301
+ R EV ++ G+ + R LI F +G E A+ ++ + R V + +N
Sbjct: 253 VRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNT 312
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
+I CR+ + M ++G E TYN + LC+ + A+A LL M+ +
Sbjct: 313 MIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKG 372
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
P+ +TY I C+ G A F +M +G P + T+ + GY +A
Sbjct: 373 VPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAE 432
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
++ K Y+ L H N +A + EM G PNV Y ++ L
Sbjct: 433 RFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGL 492
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 60/132 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN+++ ++ + EM + G P TY ++ C NG+ A +L E
Sbjct: 412 VVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFE 471
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM R P+ + Y I + G+ + AF ++ M+K GL P + ++A +
Sbjct: 472 EMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGSLHTDN 531
Query: 416 RYEDAYKYVVLS 427
R + +K + +S
Sbjct: 532 RKDIHHKQIKVS 543
>gi|255560884|ref|XP_002521455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539354|gb|EEF40945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 623
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 154/372 (41%), Gaps = 33/372 (8%)
Query: 165 EILRVL---NSEKVSALCFLKYMREIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDF 221
EI RVL S+ +SAL F +++ + + C LV + E M+ L
Sbjct: 93 EISRVLLRCQSDSISALTFFSWVKNDLGLQPSIQNYCFLVHILAWSKEFKEAMKFLTELI 152
Query: 222 NVYQVC-LNEKAFGFL----------PVLIS--SKALTKKGIWR--------VVEV---L 257
+ + C NE F L PV+ KA ++G+ + +VEV
Sbjct: 153 KLVKDCSFNEDVFQTLLFCCQDCNWDPVIFDMLVKAYVREGMIKEGFTTFRKIVEVGCVP 212
Query: 258 NQVGGSCLVSGVRALIEMFSVLGLY-EMAKYVIKKTERKVSY-YNILIKEMCRRCDFKGP 315
+ + +CL++G+ L + +Y EMA+ I SY +NIL C+ D
Sbjct: 213 SVISCNCLLNGLLKLNRIDQCWQVYKEMARVGIHPN----SYTFNILTHVFCQDGDVDKV 268
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
D L M + G EP +TYN ++ C+ G+ DA L M RN PD ++Y +
Sbjct: 269 NDFLERMEEEGFEPDIVTYNTLISCYCRKGRLDDAFYLYRIMYRRNVLPDLVSYTALMNG 328
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
C+ GK A F++M+ RGL P + + I GY + ++ +
Sbjct: 329 LCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGICPD 388
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSS 495
+ +L + K V A N++ E+ + G+ + +Y ++ + + AK L
Sbjct: 389 KVTCQVLIEGYRKEARIVSALNLVVELERFGVPISTDIYDYLMVSICEEGRPFAAKSLLQ 448
Query: 496 RYSSLSLGSSVE 507
R S VE
Sbjct: 449 RISQRGYVPGVE 460
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 96/225 (42%), Gaps = 4/225 (1%)
Query: 258 NQVGGSCLVSGVRALIEMFSVLGLY-EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPR 316
++V L+ G R + S L L E+ ++ + + Y+ L+ +C +
Sbjct: 388 DKVTCQVLIEGYRKEARIVSALNLVVELERFGVPIS---TDIYDYLMVSICEEGRPFAAK 444
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
LL + Q G P YN ++ LCK+ ADA + EM RN P AITY+ I
Sbjct: 445 SLLQRISQRGYVPGVEIYNKLIESLCKSDSIADALLVKSEMGHRNIKPSAITYKALICCL 504
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
CR + A + +M++ G+ P A + Y A + A +++ +
Sbjct: 505 CRTSRSMEAESLMEEMLQSGMLPDPDICRALMHVYCKERDIGKAETLLQTFAKEFQIFDS 564
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y+ L + ++ + + M+K G PN+ +R+++ L
Sbjct: 565 ESYNTLVKTYCEDADATRLMELQDRMLKVGFAPNIQTFRQMIHGL 609
>gi|410109893|gb|AFV61026.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
fucata]
Length = 414
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 88/183 (48%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ +L EM G P ++T+ ++ CKNG+ A E+ +
Sbjct: 195 VYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYK 254
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G A + ++M +GL+P T+ I G
Sbjct: 255 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDG 314
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ A+++ + +++Y+ L S + V A+ +L EM+ GL+P+ Y
Sbjct: 315 DLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAEKMLREMLSVGLKPDARTYT 374
Query: 476 RVL 478
++
Sbjct: 375 MII 377
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 78/181 (43%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ C+ D + + + + + G P ++YN ++ + G + L M
Sbjct: 127 FFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAM 186
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
L PD TY + I C+ K D A F++M+ +GL P T I G+ R
Sbjct: 187 LASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRV 246
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ A + + S + Y+ L K + A +++ EM GL+P+ Y +
Sbjct: 247 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTL 306
Query: 478 L 478
+
Sbjct: 307 I 307
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 95/228 (41%), Gaps = 5/228 (2%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
LI+ + G EMA + + + K V Y +I C++ DFK LL+EM
Sbjct: 244 TLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSR 303
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G YN ++ K+G A E +E M+ C PD +TY I SCR GK A
Sbjct: 304 GLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEA 363
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
Q + +GL P ++ I Y Y+ A +++ ++ + Y L
Sbjct: 364 DQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHG 423
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
+A + +M++ G+ P+ +Y ++ L + AK L
Sbjct: 424 LVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLL 471
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 94/212 (44%), Gaps = 5/212 (2%)
Query: 272 LIEMFSVLGLYEMA-KYVIKKTER----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI + G Y+ A ++I+ TER + Y L+ + + + +M + G
Sbjct: 385 LIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERG 444
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
P YN ++ LCK + A LL EML ++ PDA Y + R G D A
Sbjct: 445 VFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEAR 504
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
F +++G+ P + + A IKGY F +DA + ++ + YS + +
Sbjct: 505 KLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGY 564
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
K ++ A+ + EM+K +PNV Y ++
Sbjct: 565 VKQHDLDGAQKMFREMVKMKCKPNVVTYTSLI 596
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 71/181 (39%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI CR LL + G P +Y ++ CK G A L EM
Sbjct: 347 YNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMT 406
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R PD +TY + G+ DVA +M++RG+ P + + G ++
Sbjct: 407 ERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLP 466
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + D+ +Y+ L +N N A+ + ++ G+ P + Y ++
Sbjct: 467 AAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMI 526
Query: 479 K 479
K
Sbjct: 527 K 527
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 75/165 (45%), Gaps = 5/165 (3%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEM 306
++ E+ + G + + G A+I+ + G+ + A I + +++ Y+ +I
Sbjct: 505 KLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGY 564
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
++ D G + + EM ++ C+P +TY ++ C+ G + ++ EM P+
Sbjct: 565 VKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNV 624
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
+TY I I C+ K A +FF +M+ P T + G+
Sbjct: 625 VTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGF 669
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/297 (20%), Positives = 128/297 (43%), Gaps = 18/297 (6%)
Query: 195 SDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGF---LPVLISSKALTKKGIW 251
SD+ LV+D R+ D E + + + Q F + L +L S+ ++ +
Sbjct: 60 SDVAHLVLD---RIRDVELGLKFFDWVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEV- 115
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYY------NILIKE 305
V+E + S + +I+ +S GL E A + + +Y+ N L+
Sbjct: 116 -VLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNM 174
Query: 306 MCRRCDFKGPRDLLVEMRQVGCEPITLTYNY----VLGVLCKNGQDADACELLEEMLGRN 361
+ + + R L EM ++ NY ++ LCK G+ + +L+E+ G+
Sbjct: 175 LVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQG 234
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
C P+ I Y I C+ G ++A F ++ +G P + T+ A I G+ ++
Sbjct: 235 CIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAID 294
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ ++ + + + +Y+ + K+ + V A + M++ G +P++ Y ++
Sbjct: 295 RLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLI 351
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 69/175 (39%), Gaps = 6/175 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ R + R L + G P + YN ++ CK G DA + M
Sbjct: 487 YATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMK 546
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R+ PD TY I + D A F +MVK +P + T+ + I G F R
Sbjct: 547 KRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLING---FCRKG 603
Query: 419 DAYKYVVLSADKYKSS---SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
D ++ + + + + + YS+L K + A + EM+ N PN
Sbjct: 604 DLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPN 658
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 47/129 (36%), Gaps = 14/129 (10%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA---DACE 352
V Y+ILI C+ EM C P +T+NY++ KNG A E
Sbjct: 624 VVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNE 683
Query: 353 LLE-----------EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
E M+ P + Y ++ C+ G F A N+M +G P
Sbjct: 684 FQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDS 743
Query: 402 ATHAAFIKG 410
+ A + G
Sbjct: 744 VSFVALLHG 752
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 91/189 (48%), Gaps = 10/189 (5%)
Query: 300 NILIKEMCRRCDFKGPRDLLVE-MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
N L+K +C + D+L++ M ++GC P ++YN +L C + +A ELL M
Sbjct: 133 NQLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMA 192
Query: 359 ---GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF--- 412
GR+C P+ ++Y I G+ D A+N F +M+ RG+QP + T+ I G
Sbjct: 193 DSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQ 252
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
+ R E ++ ++ DK N Y+ L + +L EM +GL+P+
Sbjct: 253 VVDRAEGVFQQMI---DKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCY 309
Query: 473 VYRRVLKHL 481
Y +L +L
Sbjct: 310 TYGSLLNYL 318
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 95/207 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V ++N ++ +C + + L+ M +VG P ++Y ++G C G+ +A + L+
Sbjct: 483 VVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLD 542
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
ML PD TY + CR G+ D A+ F +M++ G+ P + T++ + G F
Sbjct: 543 VMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTR 602
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R+ +A + + K + +Y+++ + KNN A + + + ++ +
Sbjct: 603 RFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFN 662
Query: 476 RVLKHLHTSHQEHMAKCLSSRYSSLSL 502
++ L S + A L + SS L
Sbjct: 663 IMIGALFKSGRNEDAMHLFATISSYGL 689
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 109/285 (38%), Gaps = 41/285 (14%)
Query: 214 MRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALI 273
M LLN + + F + + KA+ + + + + Q G S V ALI
Sbjct: 362 MHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAM-HIFNKMKQQGLSPDVVNFGALI 420
Query: 274 EMFSVLGLYEMA-----KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCE 328
+ LG + A + + + + +N L+ +C ++ ++ EM G
Sbjct: 421 DALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIR 480
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P + +N +L LC GQ A L++ M PD I+Y I C VG+ D A
Sbjct: 481 PDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKS 540
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
+ M+ GL+P T+ + GY R +DAY
Sbjct: 541 LDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAY--------------------------- 573
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
V EM++NG+ P V Y +L L T+ + AK L
Sbjct: 574 --------GVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKEL 610
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 82/183 (44%), Gaps = 5/183 (2%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEM---RQVGCEPITLTYNYVLGVLCKNGQDADACE 352
V YN L+K C + +LL M + C P ++Y V+ GQ A
Sbjct: 165 VVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYN 224
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
L EM+ R P+ +TY I C+ D A F QM+ +G++P T+ I GY
Sbjct: 225 LFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYL 284
Query: 413 IFYRYEDAYKYV-VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
++++ + + +SA K SLL L + N A+ M++ G++PNV
Sbjct: 285 SIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCN-NGRCREARFFFDSMIRKGIKPNV 343
Query: 472 SVY 474
++Y
Sbjct: 344 AIY 346
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 82/182 (45%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
+ + V Y +I +C+ + +M G +P TYN ++ G+ +
Sbjct: 232 RGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKE 291
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
+LEEM PD TY + Y C G+ A FF+ M+++G++P +A + I
Sbjct: 292 VVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIH 351
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
GY + + + L + S + +++++ + + K A ++ ++M + GL P
Sbjct: 352 GYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSP 411
Query: 470 NV 471
+V
Sbjct: 412 DV 413
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 80/204 (39%), Gaps = 35/204 (17%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K + V+ Y ILI + DLL M + G P +N + K +
Sbjct: 337 KGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDE 396
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A + +M + PD + + I C++G+ D A FNQM+ G+ P +
Sbjct: 397 AMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNI-------- 448
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
F+F ++ Y + + DK++ AK EM+ G+RP
Sbjct: 449 --FVF----NSLVYGLCTVDKWEK---------------------AKEFYFEMLNQGIRP 481
Query: 470 NVSVYRRVLKHLHTSHQEHMAKCL 493
+V + +L +L T Q A+ L
Sbjct: 482 DVVFFNTILCNLCTKGQVMKAQRL 505
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 95/227 (41%), Gaps = 35/227 (15%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K E + YN+LI MC D ++L ++ GC+P +TY VL LC + + +
Sbjct: 226 KGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKE 285
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
EL EM C PD +T+ + C+ G D A + M + G P + T+++ +
Sbjct: 286 VEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILD 345
Query: 410 GYFIFYRYEDAYKYV---------------------VLSADKYKSSSNMLYSLLASLHDK 448
G R +DA + + + S ++++ + ++ ++ S
Sbjct: 346 GLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPP 405
Query: 449 NN---NPVMAK-----------NVLSEMMKNGLRPNVSVYRRVLKHL 481
+ N V+A V+ +M +NG P++ Y ++ L
Sbjct: 406 DEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGL 452
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 124/300 (41%), Gaps = 25/300 (8%)
Query: 205 CGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVG--- 261
CG + ++ + +L + + +E F + + + L + I +VV+ +++ G
Sbjct: 278 CGS-ERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAI-KVVDHMSEHGCIP 335
Query: 262 ----------GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCD 311
G C V V +E+ S L Y I Y ++K +C
Sbjct: 336 DIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIA--------YTTVLKGLCSIEQ 387
Query: 312 FKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEI 371
++ +L+ EM C P +T+N V+ LC+ G A +++E+M C+PD +TY
Sbjct: 388 WEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNS 447
Query: 372 FIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV-LSADK 430
I C D A + + G +P + T +KG R+EDA + +V +
Sbjct: 448 IIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSD 507
Query: 431 YKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
+ +++ SL K + A L M +NG PN S Y V+ L + + A
Sbjct: 508 CPPDATTFNTVITSLCQK-GLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEA 566
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 96/229 (41%), Gaps = 4/229 (1%)
Query: 256 VLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTE--RKVSYYNILIKEMCRRCDFK 313
V +G S V ++ + G E A+ +I +N LI+ +C R
Sbjct: 120 VFATLGASATVVTYNTMVNGYCRAGRIEDARRLISGMPFPPDTFTFNPLIRALCVRGRVP 179
Query: 314 GPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFI 373
+ +M GC P +TY+ +L CK A LL+EM + C PD +TY + I
Sbjct: 180 DALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLI 239
Query: 374 VYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK-YVVLSADKYK 432
C G D A N + + G +P T+ +K R+++ + + ++++K
Sbjct: 240 NAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCA 299
Query: 433 SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+++ SL + A V+ M ++G P++ Y +L L
Sbjct: 300 PDEVTFNTIVTSLCQQGLVD-RAIKVVDHMSEHGCIPDIVTYSSILDGL 347
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 9/202 (4%)
Query: 280 GLYEMAKYVIKKTER-----KVSYYNILIKEMC-RRCDFKGPRDLLVEMRQVGCEPITLT 333
GL + A V+++ + YN +I +C RC +LL ++ GC+P +T
Sbjct: 421 GLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERC-IDDAMELLSNLQSYGCKPDIVT 479
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
+N +L LC + DA +L+ M+ +C PDA T+ I C+ G A M
Sbjct: 480 FNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMA 539
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPV 453
+ G P +T+ + + ++A K +LS + + Y+ + S K
Sbjct: 540 ENGCIPNQSTYNIVVDALLKAGKTQEALK--LLSGMTNGTPDLITYNTVISNITKAGKME 597
Query: 454 MAKNVLSEMMKNGLRPNVSVYR 475
A ++L M+ NGL P+ YR
Sbjct: 598 EALDLLRVMVSNGLSPDTITYR 619
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 5/135 (3%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
S YNI++ + + + LL M P +TYN V+ + K G+ +A +LL
Sbjct: 548 STYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNITKAGKMEEALDLLRV 605
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
M+ PD ITY CR D A ++ GL P + + G+ +R
Sbjct: 606 MVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWR 665
Query: 417 YE---DAYKYVVLSA 428
+ D + ++V S
Sbjct: 666 TDIAIDCFAHMVSSG 680
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 54/127 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I + + + DLL M G P T+TY + +C+ A +L +
Sbjct: 583 YNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQ 642
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PDA Y ++ C+ + D+A + F MV G P +T+ ++ +
Sbjct: 643 DMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLD 702
Query: 419 DAYKYVV 425
+A + +V
Sbjct: 703 EAKQLLV 709
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 125/277 (45%), Gaps = 23/277 (8%)
Query: 225 QVCLNEKAFGFLPVLISSKAL-----TKKGIWRVVEVLNQVG-GSCLVSGVRALIEMFSV 278
QV KA GFLP +++ + ++ + ++VL+Q+ +C+ + + I + +
Sbjct: 158 QVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEAT 217
Query: 279 L---GLYEMAKYVIKKTER----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPIT 331
+ G+ E K + + R + YN +I+ MC+ + +L+ + GC+P
Sbjct: 218 IVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDV 277
Query: 332 LTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQ 391
++YN +L G+ + +L+ EM R C P+ +TY I I CR G+ D A +
Sbjct: 278 ISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKV 337
Query: 392 MVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML-----YSLLASLH 446
M+++ L P ++ I R + A + Y S+ L Y+ + +
Sbjct: 338 MIEKELTPDTYSYDPLISALCKEGRLDLAIGIM-----DYMISNGCLPDIVNYNTILAAL 392
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHT 483
KN N A + +++ G PNVS Y ++ L +
Sbjct: 393 CKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWS 429
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 83/190 (43%)
Query: 292 TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADAC 351
TE V YN +I C+ + +L M+ G P +TYN ++G LC + A
Sbjct: 133 TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 192
Query: 352 ELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
++L+++L NC P ITY I I + G + A +M+ RGL P + T+ A I+G
Sbjct: 193 KVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 252
Query: 412 FIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
E A + + K + Y++L + +++EM G PN
Sbjct: 253 CKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 312
Query: 472 SVYRRVLKHL 481
Y ++ L
Sbjct: 313 VTYSILISSL 322
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 70/144 (48%), Gaps = 7/144 (4%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
VS YN +I + D ++ M G +P +TYN ++ LC++G +A LL+
Sbjct: 417 VSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLD 476
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY-FIF 414
+M P I+Y I ++ C+V + D A F +M+++G +P T+ I+G F
Sbjct: 477 DMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAG 536
Query: 415 YRYE------DAYKYVVLSADKYK 432
+R E + V+S D +K
Sbjct: 537 WRTEAMELANSLFSRDVISQDSFK 560
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 117/287 (40%), Gaps = 44/287 (15%)
Query: 238 VLISSKALTKKGIWRVVEVLNQVGGSCLVSGV---RALIEMFSVLGLYEMAKYVI----- 289
+LI + + + GI +++L ++ L+ + A+I G+ E A +I
Sbjct: 212 ILIEA-TIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTS 270
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K + V YNIL++ + + L+ EM GCEP +TY+ ++ LC+ G+ +
Sbjct: 271 KGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDE 330
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH----A 405
A +L+ M+ + PD +Y+ I C+ G+ D+A + M+ G P + + A
Sbjct: 331 AISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILA 390
Query: 406 AFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNN----PVM------- 454
A K E K + SS N + S L S D++ P M
Sbjct: 391 ALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDP 450
Query: 455 --------------------AKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A +L +M ++G RP V Y VL L
Sbjct: 451 DEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGL 497
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 57/122 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++ +C+ + ++ ++R +GC P +YN ++ L G + A ++ M+
Sbjct: 385 YNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMI 444
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD ITY I CR G + A + M + G +P + ++ + G R +
Sbjct: 445 SKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRID 504
Query: 419 DA 420
DA
Sbjct: 505 DA 506
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 73/181 (40%), Gaps = 1/181 (0%)
Query: 319 LVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCR 378
++E+ + EP YN V+ CK + A ++L M R PD +TY I I C
Sbjct: 125 VMEILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCN 184
Query: 379 VGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML 438
K +A +Q++ P + T+ I+ + +A K + +
Sbjct: 185 RRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYT 244
Query: 439 YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK-HLHTSHQEHMAKCLSSRY 497
Y+ + K A +++ + G +P+V Y +L+ L+ + K ++ +
Sbjct: 245 YNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMF 304
Query: 498 S 498
S
Sbjct: 305 S 305
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
SC+ GKF+ + F +V +G P + IKG+F F E A + V+ + +
Sbjct: 78 SCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASR-VMEILESHTEPD 136
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y+ + S K N A VL+ M G P++ Y ++ L
Sbjct: 137 VFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSL 182
>gi|410109873|gb|AFV61016.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
citrodora]
Length = 380
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 84/177 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ +L EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 204 VYTYSVLINGLCKESKMDDANELFDEMLDKGMVPNGVTFTTLIDGHCKNGRVDLAMEIYK 263
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G+ A + ++M GL+P T+ I G
Sbjct: 264 QMLSQSLSPDLITYNTLIYGLCKKGELKQAHDLIDEMSMEGLKPDKITYTTLIDGCCKEG 323
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
E A+++ + +++Y+ L S + V A+ +L EM+ GL+PN
Sbjct: 324 DMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLKPNTG 380
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 55/115 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +N LI R D L M G +P TY+ ++ LCK + DA EL +
Sbjct: 169 VVSFNTLINGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFD 228
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
EML + P+ +T+ I C+ G+ D+A + QM+ + L P L T+ I G
Sbjct: 229 EMLDKGMVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 283
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 78/181 (43%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL++ C+ D + + +L + + G P +++N ++ + G + L M
Sbjct: 136 FFNILMQRFCKEGDIRVAQLVLNAITKWGLRPSVVSFNTLINGYIRLGDLDEGFRLKSAM 195
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
PD TY + I C+ K D A F++M+ +G+ P T I G+ R
Sbjct: 196 HASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGMVPNGVTFTTLIDGHCKNGRV 255
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ A + + S + Y+ L K A +++ EM GL+P+ Y +
Sbjct: 256 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGELKQAHDLIDEMSMEGLKPDKITYTTL 315
Query: 478 L 478
+
Sbjct: 316 I 316
>gi|125582060|gb|EAZ22991.1| hypothetical protein OsJ_06687 [Oryza sativa Japonica Group]
Length = 466
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 13/210 (6%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEM-RQV 325
LI+M GL A V ++ R + Y+ L+ +G ++ +++ R +
Sbjct: 252 LIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSE----QGLVEVAIQLFRSM 307
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
C+P +YN VL LC+ + DA EL+ EM+G++C P+ +T+ I I C+ G D A
Sbjct: 308 PCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRA 367
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
QM G P + T+ A I G+ R +DA K +LS K + S L L
Sbjct: 368 IEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALK--LLSTMSCKPDAISYNSTLKGL 425
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ A+ +++EM++N PN ++
Sbjct: 426 C-RAERWQDAEELVAEMLRNKCTPNEVTFK 454
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 101/232 (43%), Gaps = 8/232 (3%)
Query: 252 RVVEVLNQV---GGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSY--YNILIKEM 306
R V++L+Q+ G + V LI FS G + A ++ K + YN +K +
Sbjct: 60 RAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCKPNTVCYNAALKGL 119
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
C ++ +L+ EM + GC P T++ ++ LC+N A E+LE+M C PD
Sbjct: 120 CIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDT 179
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
+ Y I I G+ D A N MV +P A +KG+ R+ DA + +
Sbjct: 180 VNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQ 236
Query: 427 SADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
M +++L + +N A V +M + P++ Y +L
Sbjct: 237 MFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLL 288
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 3/180 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N ++K CR + +L+ +M + C I +T+N ++ +LC+NG A ++ E+M
Sbjct: 214 FNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMP 273
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C PD +TY + G +VA F M +P + ++ A +KG R+E
Sbjct: 274 RYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSM---PCKPDIFSYNAVLKGLCRAARWE 330
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA + + K + + +++L + + A VL +M G P++ Y ++
Sbjct: 331 DAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALI 390
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 3/183 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++K +C ++ +L+ EM + C P +T+ + C+NG A +LL++M
Sbjct: 10 YNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMP 69
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C PD + Y I G D A + N M+ +P + A +KG I R+E
Sbjct: 70 RYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNAALKGLCIAERWE 126
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
D + + K S + +S+L S +NN A VL +M K G P+ Y ++
Sbjct: 127 DIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIII 186
Query: 479 KHL 481
L
Sbjct: 187 NSL 189
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 6/131 (4%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L +M KY E YNI+I + R D L + + C+P L +N VL
Sbjct: 167 LEQMEKY---GCEPDTVNYNIIINSLSERGRVD---DALRLLNSMVCKPDALGFNAVLKG 220
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
C+ + DA EL+ +M +C +T+ I I C+ G + A F QM + P
Sbjct: 221 FCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPD 280
Query: 401 LATHAAFIKGY 411
+ T+++ + G+
Sbjct: 281 IVTYSSLLNGF 291
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 63/155 (40%), Gaps = 8/155 (5%)
Query: 273 IEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGC 327
I F GL + A ++ + R V Y+ LI + DLL M C
Sbjct: 49 IRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---C 105
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
+P T+ YN L LC + D EL+ EM+ + C P+ T+ + I C+ D A
Sbjct: 106 KPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVE 165
Query: 388 FFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
QM K G +P + I R +DA +
Sbjct: 166 VLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALR 200
>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
Length = 789
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 114/299 (38%), Gaps = 92/299 (30%)
Query: 240 ISSKALTKKGIWR-VVEVLNQVGGSCLVSGV---RALIEMFSVLGLYEMAKYVIKKTER- 294
I K L + G R +E+LN++ S +V LI+ F +GL A+ + + R
Sbjct: 341 IMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRH 400
Query: 295 ----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
V Y+ILI MCR + +++ EM ++GC P +T+N ++ LCK GQ A
Sbjct: 401 DCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKA 460
Query: 351 CELLEEM-LGRN---------------------------CH------------------- 363
L +M +GRN C
Sbjct: 461 HLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGD 520
Query: 364 -PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
P TY I + C++G F+ A+ F +M +GL P T+ I G F R EDAYK
Sbjct: 521 APGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYK 580
Query: 423 YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
V +M KNG P+ +VYR ++ +
Sbjct: 581 -----------------------------------VFDQMEKNGCTPDAAVYRTMMTWM 604
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M ++ C P T++ ++ LCK+G DA L +EM R PDA TY + I CR +
Sbjct: 187 MMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKR 246
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL-SADKYKSSSNMLYS 440
D A+ F++M G+ P T A + G+ + R ++A+ + L D Y
Sbjct: 247 VDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSC 306
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
L+ L + + + +M+++ ++P+V +Y ++K L
Sbjct: 307 LIRGLF-RAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGL 346
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 84/185 (45%), Gaps = 2/185 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V+ ++ILI +C+ + K L EM Q G P TY V+ LC++ + DA L +
Sbjct: 196 VATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFD 255
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M PD +T + C + + D AF+ K G + ++ I+G F
Sbjct: 256 KMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAK 315
Query: 416 RYEDA-YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
RYED Y + D K LY+++ + A +L+EM ++G+ P+ Y
Sbjct: 316 RYEDVQLLYRKMIEDNVKPDV-YLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCY 374
Query: 475 RRVLK 479
++K
Sbjct: 375 NVLIK 379
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 75/173 (43%), Gaps = 12/173 (6%)
Query: 256 VLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGP 315
VL+ G SCL+ G+ V LY K + + V Y I++K + +
Sbjct: 298 VLDVRGYSCLIRGLFRAKRYEDVQLLYR--KMIEDNVKPDVYLYTIMMKGLAEAGKVRDA 355
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
+LL EM + G P T+ YN ++ C G ++A L E+ +C P+ TY I I
Sbjct: 356 LELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISG 415
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG----------YFIFYRYE 418
CR G A FN+M K G P T + I G + +FY+ E
Sbjct: 416 MCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKME 468
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 86/206 (41%), Gaps = 15/206 (7%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+LIK C R L +E+ + C P TY+ ++ +C+NG DA E+ EM
Sbjct: 374 YNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEME 433
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL--------------ATH 404
C+P A+T+ I C+ G+ + A F +M + G P L A+
Sbjct: 434 KLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKM-EIGRNPSLFLRLSQGPSHVLDSASL 492
Query: 405 AAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMK 464
++ AY+ ++ AD + Y++L + K N A + EM
Sbjct: 493 QKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQF 552
Query: 465 NGLRPNVSVYRRVLKHLHTSHQEHMA 490
GL P+ Y ++ L +E A
Sbjct: 553 KGLSPDTVTYGTLINGLLRFQREEDA 578
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
MR C P TYN +L VL + A + M+ NC P+ T+ I I C+ G
Sbjct: 152 MRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGN 211
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
A + F++M +RG+ P T+ I G R +DAY+ DK K S
Sbjct: 212 VKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLF----DKMKDSG 261
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 58/114 (50%), Gaps = 1/114 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNIL+ C+ +F G L EM+ G P T+TY ++ L + ++ DA ++ ++M
Sbjct: 527 YNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQME 586
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
C PDA Y + + CR + AF+ + + + R ++ + I+GYF
Sbjct: 587 KNGCTPDAAVYRTMMTWMCRRMELPRAFSLWLKYL-RNIRSQEDEAIKAIEGYF 639
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 91/234 (38%), Gaps = 43/234 (18%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+ G C++ V E FS+L L+E YV+ V Y+ LI+ + R ++ + L
Sbjct: 273 LNGFCMLDRVD---EAFSLLRLFEKDGYVLD-----VRGYSCLIRGLFRAKRYEDVQLLY 324
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
+M + +P Y ++ L + G+ DA ELL EM PD + Y + I C +
Sbjct: 325 RKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDM 384
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
G A R LQ ++ H F + Y
Sbjct: 385 GLLSEA---------RSLQLEISRHDCF--------------------------PNVKTY 409
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
S+L S +N A+ + +EM K G P+ + ++ L + Q A L
Sbjct: 410 SILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLL 463
>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 83/188 (44%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V Y L+ +C+ K RDLL M GCEP + Y+ ++ CK G+ +A E
Sbjct: 276 EPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQE 335
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+ +MLG C P+ TY I + + D+A +M++ P + + + G
Sbjct: 336 VFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLC 395
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
+ ++AY+ +++ +K + + Y+ + K +L M G PN
Sbjct: 396 KVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFI 455
Query: 473 VYRRVLKH 480
YR ++ H
Sbjct: 456 TYRVLINH 463
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 97/222 (43%), Gaps = 7/222 (3%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRC--DFKGPRD 317
+GG C + ++ V+GL E A + + ++ N+ C C F+ +
Sbjct: 53 IGGICSTEDLPSM----EVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYN 108
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
++ EM G P + TY+ V+G LC + A +L +EM PD TY + C
Sbjct: 109 VIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFC 168
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+VG + A N+F++M + G P + T+ A I Y + A + + + +
Sbjct: 169 KVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIV 228
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLR-PNVSVYRRVL 478
Y+ L H K A + + M + + P+V +Y R++
Sbjct: 229 TYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIV 270
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 35/154 (22%)
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
EP +TY ++ LCK + +A +LLE M C P+ I Y+ I C+VGK D A
Sbjct: 276 EPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQE 335
Query: 388 FFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHD 447
F +M+ G P + T+++ I F
Sbjct: 336 VFTKMLGHGCSPNVYTYSSLIDKLF----------------------------------- 360
Query: 448 KNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K+ +A VL++M++N PNV +Y ++ L
Sbjct: 361 KDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGL 394
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 100/236 (42%), Gaps = 7/236 (2%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI+ F +G + A+ V K V Y+ LI ++ + +L +M +
Sbjct: 319 ALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLEN 378
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
C P + Y ++ LCK G+ +A L+ M + C+P+ +TY I + G+ D
Sbjct: 379 SCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRC 438
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
M +G P T+ I +DA+K + Y +Y + +
Sbjct: 439 LELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKV--I 496
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLS 501
++ V + +L+E+ ++G P + VY+ ++ + + + MA L SS S
Sbjct: 497 EGFSHEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFS 552
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 79/221 (35%), Gaps = 41/221 (18%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKN-------------- 344
+N L+ CR D+ LL +M G +P + YN ++G +C
Sbjct: 14 FNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSMEVIGLAER 73
Query: 345 ---------------------------GQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
G+ A ++ EM+ + PD+ TY I Y C
Sbjct: 74 AYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSKVIGYLC 133
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
K + AF F +M + G+ P + T+ + + E A + + + +
Sbjct: 134 NASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVV 193
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
Y+ L + K A + M+ NG PN+ Y ++
Sbjct: 194 TYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALI 234
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 47/110 (42%), Gaps = 1/110 (0%)
Query: 311 DFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYE 370
+F LL E+ + G PI Y ++ K G+ A EL EE+ + TY
Sbjct: 502 EFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQN-TYV 560
Query: 371 IFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
I K D AF ++ M +RG P L+ IKG ++E+A
Sbjct: 561 SLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEA 610
Score = 38.5 bits (88), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 73/195 (37%), Gaps = 43/195 (22%)
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFI------------ 373
GC P + +N ++ C++G A +LL++M+ P + Y I I
Sbjct: 6 GCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSM 65
Query: 374 --------VYS---------------------CRVGKFDVAFNFFNQMVKRGLQPRLATH 404
Y+ C +GKF+ A+N +M+ +G P +T+
Sbjct: 66 EVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTY 125
Query: 405 AAFIKGYFI-FYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
+ I GY + E A++ + Y+ L K A+N EM
Sbjct: 126 SKVI-GYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQ 184
Query: 464 KNGLRPNVSVYRRVL 478
++G PNV Y ++
Sbjct: 185 QDGCAPNVVTYTALI 199
>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 653
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 84/192 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N+LI +C++ DF L+ M GC P +TYN ++ LC G+ A LL+ M+
Sbjct: 254 FNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMV 313
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C P+ +TY I + G+ M +RG ++ + G F + E
Sbjct: 314 SSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSE 373
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + S DK + +LYS L ++ P A +LSEM G PN + ++
Sbjct: 374 EAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLM 433
Query: 479 KHLHTSHQEHMA 490
K H A
Sbjct: 434 KGFFEVGNSHKA 445
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 79/183 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ +C+ LL EM+ GC P T+N ++ LCK G +L++ M
Sbjct: 219 YCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMF 278
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C P+ +TY I C GK D A + ++MV P T+ I G R
Sbjct: 279 LKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRAL 338
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
D + +VL ++ + +YS+L S K A + E M G + N +Y ++
Sbjct: 339 DGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALV 398
Query: 479 KHL 481
L
Sbjct: 399 DGL 401
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 130/290 (44%), Gaps = 34/290 (11%)
Query: 223 VYQVCLN---EKAFGFLPVLISSKALTKKGIW-RVVEVLNQVGGSCLVSGVRALIEM--- 275
++ +CL +KA L ++SSK + + + ++ L + G + + G R L+ M
Sbjct: 293 IHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRA--LDGARVLVLMEER 350
Query: 276 --------FSVL--GLY-----EMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGP 315
+SVL GL+ E A + K++ K Y+ L+ +CR
Sbjct: 351 GYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEA 410
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
+L EM GC P T++ ++ + G A E+ ++M NC + + Y + I
Sbjct: 411 MKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHG 470
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV--VLSADKYKS 433
C+ GK A + +M+ G +P + +++ I+G E+A K +L +
Sbjct: 471 LCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQ 530
Query: 434 SSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV---SVYRRVLKH 480
+ Y++L + K ++ A ++L+ M+ G P++ +++ R+L+
Sbjct: 531 PDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLRMLRE 580
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 79/167 (47%), Gaps = 6/167 (3%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
+LV M + G Y+ ++ L K G+ +A L +E + + C + + Y + C
Sbjct: 343 VLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLC 402
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYK---SS 434
R K D A ++M +G P T ++ +KG+F +++K + + D K +
Sbjct: 403 RDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFF---EVGNSHKAIEVWKDMTKINCAE 459
Query: 435 SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + YS+L K+ + A V ++M+ G RP+V Y +++ L
Sbjct: 460 NEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGL 506
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 67/152 (44%), Gaps = 21/152 (13%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M ++ C + Y+ ++ LCK+G+ +A + +ML C PD + Y I C G
Sbjct: 451 DMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAG 510
Query: 381 KFDVAFNFFNQM--VKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML 438
+ A +N+M ++ QP + T+ ++ +A +SS +
Sbjct: 511 SVEEALKLYNEMLCLEPDSQPDVITYN------------------ILFNALCKQSSISRA 552
Query: 439 YSLLASLHDKNNNPVMAK-NVLSEMMKNGLRP 469
LL S+ D+ +P + N+ M++ L P
Sbjct: 553 VDLLNSMLDRGCDPDLVTCNIFLRMLREKLDP 584
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 108/258 (41%), Gaps = 14/258 (5%)
Query: 258 NQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRD 317
++V + L+ G EM L+ + V K V Y L+ +C+ + +
Sbjct: 426 DEVTYTALIDGYCKAGEMKEAFSLHN--QMVEKGLTPNVVTYTALVDGLCKCGEVDIANE 483
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
LL EM + G +P TYN ++ LCK G A +L+EEM PD ITY + C
Sbjct: 484 LLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYC 543
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
++G+ A M+ +GLQP + T + G+ + ED + + DK +
Sbjct: 544 KMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNAT 603
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR---------RVLKHLHTSHQEH 488
++ L + NN + M G+ P+ + Y R +K H+E
Sbjct: 604 TFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEM 663
Query: 489 MAKCLS---SRYSSLSLG 503
+ K S + Y+SL G
Sbjct: 664 VEKGFSLTAASYNSLIKG 681
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 78/176 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +I +C+ R L EM G +P +TY ++ CK G+ +A L +M+
Sbjct: 395 YTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMV 454
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+ +TY + C+ G+ D+A ++M ++GLQP + T+ A I G E
Sbjct: 455 EKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIE 514
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
A K + + Y+ + + K A +L M+ GL+P + +
Sbjct: 515 QAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTF 570
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 75/183 (40%), Gaps = 35/183 (19%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI + + L EM++ P +TY ++ LC+ G+ +A +L EML
Sbjct: 360 YTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEML 419
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD +TY I C+ G+ AF+ NQMV++GL P + T+ A + G
Sbjct: 420 SKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLC------ 473
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
K +A +L EM + GL+PNV Y ++
Sbjct: 474 -----------------------------KCGEVDIANELLHEMSEKGLQPNVCTYNALI 504
Query: 479 KHL 481
L
Sbjct: 505 NGL 507
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K + + +N+L+ C + L+ M G P T+N ++ C
Sbjct: 561 KGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRA 620
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
E+ + M + PD TY I I C+ A+ +MV++G A++ + IK
Sbjct: 621 TIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIK 680
Query: 410 GYFIFYRYEDAYK 422
G++ ++E+A K
Sbjct: 681 GFYKRKKFEEARK 693
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 8/134 (5%)
Query: 264 CLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMR 323
C+ + +RA IE++ G++ A+ V+ T + YNILIK C+ + K L EM
Sbjct: 613 CIRNNMRATIEIYK--GMH--AQGVVPDT----NTYNILIKGHCKARNMKEAWFLHKEMV 664
Query: 324 QVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
+ G +YN ++ K + +A +L EEM + Y+IF+ + G ++
Sbjct: 665 EKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWE 724
Query: 384 VAFNFFNQMVKRGL 397
++ +++ L
Sbjct: 725 NTLELCDEAIEKCL 738
>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 794
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 112/255 (43%), Gaps = 13/255 (5%)
Query: 238 VLISSKALTKKGI----WRVVEVLNQVGGSCLVSGV--RALIEMFSVLGLYEMAKYVIKK 291
V I K L K+G W+++E + G C+ + V LI+ + G E A + K+
Sbjct: 175 VCIMVKGLCKEGKVEDGWKLIE--KRWGRGCMPNIVFYNTLIDGYCKKGDTERANVLFKE 232
Query: 292 TERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQ 346
+ K V Y +I C++ F+ LLVEM + G + YN ++ K+G
Sbjct: 233 LKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGC 292
Query: 347 DADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAA 406
+A + + M+ C PD TY I I SC G+ A Q +KRGL P ++
Sbjct: 293 RIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTP 352
Query: 407 FIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNG 466
I Y Y A ++ +++ + Y+ L +A V ++M++ G
Sbjct: 353 LIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKG 412
Query: 467 LRPNVSVYRRVLKHL 481
+ P+ ++Y ++ L
Sbjct: 413 VLPDANIYNVLMSGL 427
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 67/154 (43%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M + G P YN ++ LCK G+ A LL EML +N PDA + R G
Sbjct: 407 KMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHG 466
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
F+ A F +++G+ P + + A IKGY F +DA S YS
Sbjct: 467 DFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYS 526
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + K N+ A + M+K +PNV Y
Sbjct: 527 TIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTY 560
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 82/209 (39%), Gaps = 5/209 (2%)
Query: 271 ALIEMFSVLGLYEMA-----KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI V G ++A K V K + YN+L+ +C++ + LL EM
Sbjct: 387 ALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQ 446
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
P ++ ++G +A +L E + + P + Y I C+ G A
Sbjct: 447 NVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDA 506
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
F +M++ P T++ I GY A + L + + Y+LL +
Sbjct: 507 LLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLING 566
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + A+ +M+ L+PNV Y
Sbjct: 567 FCLSGDINRAEKTFKQMLSLRLKPNVVTY 595
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 73/184 (39%), Gaps = 8/184 (4%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
L+ R DF+ + L + G +P + YN ++ CK G DA + M+
Sbjct: 458 LVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGL 517
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI---FYRYE 418
PD TY I ++ A F MVK +P + T+ I G+ + R E
Sbjct: 518 HSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAE 577
Query: 419 DAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+K ++ + N++ Y++L K N A + +M+ PN Y +
Sbjct: 578 KTFKQML----SLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYL 633
Query: 478 LKHL 481
+ L
Sbjct: 634 MNGL 637
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 63/150 (42%), Gaps = 5/150 (3%)
Query: 266 VSGVRALIEMFSVLGLYEMAKYVIKKTERKVS-----YYNILIKEMCRRCDFKGPRDLLV 320
V G A+I+ + G+ + A K+ + + Y+ +I + D G +
Sbjct: 487 VVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFG 546
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
M + C+P +TY ++ C +G A + ++ML P+ +TY I I C+
Sbjct: 547 LMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGV 606
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
A +FF QM+ P T+ + G
Sbjct: 607 NLTKACSFFEQMLMEKCLPNDVTYNYLMNG 636
>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
Length = 1139
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 78/157 (49%), Gaps = 15/157 (9%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+NILIK +C+ + DL+ ++ + G P ++Y+ ++ LCK G A EL EML
Sbjct: 760 FNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEML 819
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD + Y IFI + G+ D A + M++ G+QP T+ A + G + Y+
Sbjct: 820 YKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMLHYD 879
Query: 419 -----DAYKYVVLSADKYKSSSNMLYSLLASLHDKNN 450
+Y+ +S +Y L+ S H+K++
Sbjct: 880 FSCFRGTKQYIQIS----------VYELMDSTHNKSH 906
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 2/148 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ LI +CR D +L EM + G T+ ++ CK+ + +A L ++M+
Sbjct: 446 YSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMI 505
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
N P+ +T+ + I C VG AF ++QMV+ GL+P T+ + I G +
Sbjct: 506 DSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVS 565
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLH 446
A ++V + Y +N +SL A L+
Sbjct: 566 KANEFVADLENSYAVLNN--FSLTALLY 591
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 51/112 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI ++C+ F L EM G EP +TY ++ LCK G DA L ++M
Sbjct: 341 YNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMR 400
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ Y I C+ G D A + MVK GL P A+++ I G
Sbjct: 401 DKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAG 452
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 80/180 (44%), Gaps = 36/180 (20%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN + D + +DL M Q G +++N ++ LCK G+ +A +L+ ++
Sbjct: 726 YNCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMSKIT 784
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD I+Y I C++G + AF +N+M+ +GL+P + Y IF R+
Sbjct: 785 ESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVA-------YNIFIRW- 836
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
++H +++ A + + M+++G++PN YR +L
Sbjct: 837 ------------------------CNVHGESDK---ALGIYTNMIRSGVQPNWDTYRALL 869
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 56/110 (50%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
+I E+ ++ + L ++ +G P YN ++ LCKN + DA L +EM GR
Sbjct: 309 MIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRG 368
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
P+ +TY I I C+ G + A F++M +G++ + + + I GY
Sbjct: 369 LEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGY 418
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 76/195 (38%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y I+ C + G R L+V M G + + YN ++ LCKN + +A E+ M+
Sbjct: 201 YTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMV 260
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
D +TY + CR+ + ++A + M++ G P A + I E
Sbjct: 261 NIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVE 320
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A+ D + Y+ L KN A + EM GL PN Y ++
Sbjct: 321 EAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILI 380
Query: 479 KHLHTSHQEHMAKCL 493
L A CL
Sbjct: 381 HALCKRGMIEDALCL 395
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 76/183 (41%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ILI +C+R + L +MR G + YN ++ CK G A LL M+
Sbjct: 376 YAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMV 435
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P A +Y I CR G +M +RG+ T A I G+ + +
Sbjct: 436 KEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMD 495
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + D + + ++++ + N A + +M++ GL+P+ YR ++
Sbjct: 496 EAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLI 555
Query: 479 KHL 481
L
Sbjct: 556 SGL 558
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 7/180 (3%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
+Y +I + + + + +M G P T+T+ ++ LCK+G A L +EM
Sbjct: 655 FYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEM 714
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAF---IKGYFIF 414
L N P+ TY F+ Y G + A + + M LQ LA+ +F IKG
Sbjct: 715 LAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM----LQGHLASIVSFNILIKGLCKA 770
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ ++A + + S + YS + K + A + +EM+ GL+P+V Y
Sbjct: 771 GKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAY 830
>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
Length = 671
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 74/147 (50%)
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
+P TY ++G C+ G+ A A LL M+ + P+ TY I C+ G FD AF
Sbjct: 319 KPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFE 378
Query: 388 FFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHD 447
N+M + G P + T+ A I G+ + ++AYK + ++ + + Y++L + H
Sbjct: 379 LMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHC 438
Query: 448 KNNNPVMAKNVLSEMMKNGLRPNVSVY 474
K + A ++ M++NG P++ Y
Sbjct: 439 KQGHITYALDLFDRMVENGCCPDIEAY 465
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 81/180 (45%), Gaps = 1/180 (0%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
++++ +C + FK + M + G P + Y + LCK A +LEEM+G
Sbjct: 220 TVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVG 279
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK-RGLQPRLATHAAFIKGYFIFYRYE 418
R P+ T+ I C++G + AF F +++K +P + T+ I GY +
Sbjct: 280 RGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLA 339
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A +V ++ + Y+ L H K + A ++++M + G PN+ Y V+
Sbjct: 340 RAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVI 399
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 98/234 (41%), Gaps = 8/234 (3%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+GG C G A EM + + V + + + Y LI C+ F +L+
Sbjct: 329 IGGYCR-EGKLARAEML-------LVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELM 380
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
+M+Q G P TYN V+ CK G+ +A ++L + D ITY I I C+
Sbjct: 381 NKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQ 440
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
G A + F++MV+ G P + + + I Y + E++ K+ + Y
Sbjct: 441 GHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTY 500
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
+ + + + K +A V M++NG + Y ++ L + AK L
Sbjct: 501 TSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKAL 554
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 78/178 (43%), Gaps = 3/178 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ L+ CR + LL M + G T V+ LC+ G+ D E ML
Sbjct: 184 FRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRML 243
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ + Y +I C+ AF+ +MV RGL+P + TH I G E
Sbjct: 244 ETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTE 303
Query: 419 DAYKYV--VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
A++ ++ + YK + + Y+++ + + A+ +L M++ GL+PN + Y
Sbjct: 304 RAFRLFLKLIKSSSYKPNVHT-YTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTY 360
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 68/165 (41%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
D+++EMR G T N+VL V + G A ++ + M PD ++ +V
Sbjct: 132 DMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVC 191
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
CR GK + M + G AT ++ R++D ++ + +
Sbjct: 192 CREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNV 251
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ Y+ K A +VL EM+ GL+PNV + ++ L
Sbjct: 252 VNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 296
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 69/170 (40%), Gaps = 7/170 (4%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ Y LI C++ + + + +G P TY ++ CK G+ A + E
Sbjct: 462 IEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFE 521
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+ C D+ITY I C+ + + A + M+ + L P T F +
Sbjct: 522 RMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLT---FEYC 578
Query: 416 RYEDAYKYVVL--SADKYKS--SSNMLYSLLASLHDKNNNPVMAKNVLSE 461
R E V + DK + + +++ L++L D + + K VL E
Sbjct: 579 RREKTSIAVSVLDRLDKRQQVHTVDVVVRKLSALGDVDAASLFLKKVLDE 628
>gi|224088774|ref|XP_002308534.1| predicted protein [Populus trichocarpa]
gi|222854510|gb|EEE92057.1| predicted protein [Populus trichocarpa]
Length = 567
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 99/214 (46%), Gaps = 3/214 (1%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKT--ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV-GC 327
+I F +G+ + A+ V + E + N LI C++ D + R L M + C
Sbjct: 205 TMIRGFCKVGMIDNARKVFDEMICEPNLITCNTLINGYCKKGDMENARIFLCRMMESKDC 264
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
P T+TY+ ++ CK G+ +A + ++ ML R C+P+ TY I C G D A
Sbjct: 265 LPDTVTYSTLIDGYCKKGELNEARKWMDGMLIRGCNPNLWTYNAIIYGLCLRGNVDEARR 324
Query: 388 FFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHD 447
+M G++ +ATH + +KG + + E+A Y K + ++ + +
Sbjct: 325 LLTKMRLNGVKENVATHLSILKGLSVAGKSEEAIGYFSEMIRKGMKLDAKEHEVVITAYC 384
Query: 448 KNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K P A ++L EM G+ +V + VL+ L
Sbjct: 385 KMRKPDEAISLLKEMQAKGISRSVGSFNAVLRIL 418
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 86/400 (21%), Positives = 148/400 (37%), Gaps = 78/400 (19%)
Query: 107 SKLGLLTSRCISSFAMVNGPYATPKQVSEIIELLRSGDSETESKLLSMSVSLSNASVIEI 166
S+L L + S +N PK ++ + L S L + VIE+
Sbjct: 20 SELASLVTAITSCLETLNPQNPNPKHINP-------------THLNQFSPHLDSNLVIEV 66
Query: 167 LRVLNSEKVSALCFLKYMREIMPE--FYKNSDICSL-VIDNCGRLDDYETMRQLLNDFNV 223
++ AL F + + P Y ++ C + +ID + + LL
Sbjct: 67 IKEQQPNPYQALFFFNWASNLNPNPNNYSHNHRCYVAIIDLLLSHSLFPIAKNLLEKHGT 126
Query: 224 YQVCLNEK---AFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLG 280
+ L K A+G+ TK I+ +V G CL S A++ + +
Sbjct: 127 FSDLLVSKLIRAYGY-------SGDTKSAIFWFHKVKEIQQGKCLFSW-NAILGVLVKVN 178
Query: 281 LYEMAKYVIKK------TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
+AK + + S Y +I+ C+ R + EM CEP +T
Sbjct: 179 QINVAKSFFDQIVNDAVVKPDASTYTTMIRGFCKVGMIDNARKVFDEMI---CEPNLITC 235
Query: 335 NYVLGVLCKNGQDADA----CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN 390
N ++ CK G +A C ++E ++C PD +TY I C+ G+ + A + +
Sbjct: 236 NTLINGYCKKGDMENARIFLCRMMES---KDCLPDTVTYSTLIDGYCKKGELNEARKWMD 292
Query: 391 QMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNN 450
M+ RG P L T+ A I G +
Sbjct: 293 GMLIRGCNPNLWTYNAIIYGLCL-----------------------------------RG 317
Query: 451 NPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
N A+ +L++M NG++ NV+ + +LK L + + A
Sbjct: 318 NVDEARRLLTKMRLNGVKENVATHLSILKGLSVAGKSEEA 357
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 90/218 (41%), Gaps = 19/218 (8%)
Query: 288 VIKKTERKVSYYNILIKE------------MCRRCDFKGPRD---LLVEMRQVGCEPITL 332
V K+E + Y++ +I++ + C + P + LL EM+ G
Sbjct: 350 VAGKSEEAIGYFSEMIRKGMKLDAKEHEVVITAYCKMRKPDEAISLLKEMQAKGISRSVG 409
Query: 333 TYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV-GKFDVAFNFFNQ 391
++N VL +L + G+ A LL+++ C P+ ++Y I CR G+ +
Sbjct: 410 SFNAVLRILVEIGELDKAVLLLKQVKNMGCLPNLVSYSTVICGLCRSHGRMQEVAGLVDD 469
Query: 392 MVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNN 451
M++ G + ++ + G+ E A + S +K + +S +L
Sbjct: 470 MLQDGFEMDATLYSCLVGGFCEAGNEEMAMRAFYDSINKNYVINLQSFSFFVNLMCGKGK 529
Query: 452 PVMAKNVLSEMMKNGLRPNVSVYRRVLK---HLHTSHQ 486
+ A+ + +M + +V Y+RVL H H+ +
Sbjct: 530 VIEAEQIFKDMCRRCSLVDVDSYQRVLDDQLHKHSGRR 567
>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
Length = 563
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 74/147 (50%)
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
+P TY ++G C+ G+ A A LL M+ + P+ TY I C+ G FD AF
Sbjct: 211 KPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFE 270
Query: 388 FFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHD 447
N+M + G P + T+ A I G+ + ++AYK + ++ + + Y++L + H
Sbjct: 271 LMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHC 330
Query: 448 KNNNPVMAKNVLSEMMKNGLRPNVSVY 474
K + A ++ M++NG P++ Y
Sbjct: 331 KQGHITYALDLFDRMVENGCCPDIEAY 357
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 81/180 (45%), Gaps = 1/180 (0%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
++++ +C + FK + M + G P + Y + LCK A +LEEM+G
Sbjct: 112 TVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVG 171
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK-RGLQPRLATHAAFIKGYFIFYRYE 418
R P+ T+ I C++G + AF F +++K +P + T+ I GY +
Sbjct: 172 RGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLA 231
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A +V ++ + Y+ L H K + A ++++M + G PN+ Y V+
Sbjct: 232 RAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVI 291
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 98/234 (41%), Gaps = 8/234 (3%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+GG C G A EM + + V + + + Y LI C+ F +L+
Sbjct: 221 IGGYCR-EGKLARAEML-------LVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELM 272
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
+M+Q G P TYN V+ CK G+ +A ++L + D ITY I I C+
Sbjct: 273 NKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQ 332
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
G A + F++MV+ G P + + + I Y + E++ K+ + Y
Sbjct: 333 GHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTY 392
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
+ + + + K +A V M++NG + Y ++ L + AK L
Sbjct: 393 TSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKAL 446
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 78/178 (43%), Gaps = 3/178 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ L+ CR + LL M + G T V+ LC+ G+ D E ML
Sbjct: 76 FGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRML 135
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ + Y +I C+ AF+ +MV RGL+P + TH I G E
Sbjct: 136 ETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTE 195
Query: 419 DAYKYV--VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
A++ ++ + YK + + Y+++ + + A+ +L M++ GL+PN + Y
Sbjct: 196 RAFRLFLKLIKSSSYKPNVHT-YTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTY 252
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 69/170 (40%), Gaps = 7/170 (4%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ Y LI C++ + + + +G P TY ++ CK G+ A + E
Sbjct: 354 IEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFE 413
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+ C D+ITY I C+ + + A + M+ + L P T F +
Sbjct: 414 RMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLT---FEYC 470
Query: 416 RYEDAYKYVVL--SADKYKS--SSNMLYSLLASLHDKNNNPVMAKNVLSE 461
R E V + DK + + +++ L++L D + + K VL E
Sbjct: 471 RREKTSIAVSVLDRLDKRQQVHTVDVVVRKLSALGDVDAASLFLKKVLDE 520
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 66/165 (40%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
D+++EMR G T N+VL V + G A ++ + M P + +V
Sbjct: 24 DMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVSPMNRGFGALVVVC 83
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
CR GK + M + G AT ++ R++D ++ + +
Sbjct: 84 CREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNV 143
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ Y+ K A +VL EM+ GL+PNV + ++ L
Sbjct: 144 VNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 188
>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
Length = 833
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 15/213 (7%)
Query: 276 FSVLGLYEMAKYVIKKTERKVSY--YNILIKEMC--RRCDFKGPRDLLVEMRQVGCEPIT 331
F+V GL I KT +V++ +N L+K +C +R D + LL M + GC P
Sbjct: 215 FAVFGL-------ILKTGWRVNHIVFNQLLKGLCDAKRLD-EATNILLWRMPEFGCTPNV 266
Query: 332 LTYNYVLGVLCKNGQDADACELLEEML---GRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
++YN ++ C + +A ELL M G +C PD ++Y I R G+ D A+N
Sbjct: 267 VSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFREGQVDKAYNL 326
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
F QM+ RG+ P + T+ I G + A DK SN Y+ L +
Sbjct: 327 FLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLS 386
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+L EM + L P+ +Y +L +L
Sbjct: 387 TGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYL 419
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 104/235 (44%), Gaps = 12/235 (5%)
Query: 244 ALTKKGIWRVVE-VLNQV-GGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNI 301
L K WRV V NQ+ G C + L E ++L L+ M ++ V YN
Sbjct: 219 GLILKTGWRVNHIVFNQLLKGLC---DAKRLDEATNIL-LWRMPEF---GCTPNVVSYNT 271
Query: 302 LIKEMCRRCDFKGPRDLLVEM---RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
L+K C + +LL M + + C P ++YN V+ + GQ A L +M+
Sbjct: 272 LVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQMI 331
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R PD +TY I C+ D A F QM+ +G++P T+ I GY +++
Sbjct: 332 DRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWK 391
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
+ + + + +Y+LL KN A+N+ +++ G++P+ +
Sbjct: 392 EVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMI 446
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 118/260 (45%), Gaps = 10/260 (3%)
Query: 249 GIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCR 308
I + +++N+V G C V E+ ++EM I+ V +N L+ ++CR
Sbjct: 484 AILKFNQMINEVYGLCTVEKWEKAEEL-----VFEMLDQGIR---LDVVVFNTLMCDLCR 535
Query: 309 RCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAIT 368
+ L+ M +VG P ++YN ++ C G+ +A +LL+ M+ P+ T
Sbjct: 536 EGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFT 595
Query: 369 YEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSA 428
Y + C+ + D A++ +M+ G P + T+ + G F R+ +A K + L+
Sbjct: 596 YNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEA-KELYLNM 654
Query: 429 DKYKSSSNM-LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQE 487
++ +M Y+++ + KNN A + + GL+ ++ + ++ L ++
Sbjct: 655 INSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKK 714
Query: 488 HMAKCLSSRYSSLSLGSSVE 507
A L + S+ L VE
Sbjct: 715 EDAMDLFATISAYGLVPDVE 734
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 90/220 (40%), Gaps = 38/220 (17%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +K LL EM EP Y +L LCKNG+ +A + + ++
Sbjct: 377 YNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVI 436
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PDA+ D A F++M ++GL P + + A I R +
Sbjct: 437 RKGIKPDAM--------------IDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVD 482
Query: 419 DAY---------KYVVLSADKYKSSSNMLYSLLAS------------LHD--KNNNPVMA 455
DA Y + + +K++ + +++ +L + D + + A
Sbjct: 483 DAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEA 542
Query: 456 KNVLSEMMKNGLRPNVSVYRRVLK-HLHTSHQEHMAKCLS 494
+ ++ M++ G+RP+V Y ++ H T + AK L
Sbjct: 543 QRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLD 582
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 49/109 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN ++ + + F ++L + M + TYN +L LCKN +A ++ +
Sbjct: 628 VVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQ 687
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
+ + IT+ I I + GK + A + F + GL P + T+
Sbjct: 688 SLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETY 736
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 68/168 (40%)
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
+T+ + YNI++ +C+ + + G + +T+N ++G L K G+ DA
Sbjct: 658 RTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDA 717
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+L + PD TY + + G + F+ M + G P A ++
Sbjct: 718 MDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRR 777
Query: 411 YFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNV 458
+ A Y+ +K S S+L SL+ + +AK++
Sbjct: 778 FLHRGDISRAGAYLSKLDEKNFSLEASTASMLISLYSRGEYQQLAKSL 825
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 93/185 (50%), Gaps = 4/185 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDL--LVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
+NI+I C C F+ L L +M ++G EP +T ++ C+ + +DA L+++
Sbjct: 123 FNIVINCFC--CCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
M+ PD + Y I C+ + + AF+FF ++ ++G++P + T+ A + G R
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
+ DA + + K + + + YS L KN + AK + EM++ + P++ Y
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300
Query: 477 VLKHL 481
++ L
Sbjct: 301 LINGL 305
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 5/197 (2%)
Query: 290 KKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKN 344
K+ ERK V Y L+ +C + LL +M + P +TY+ +L KN
Sbjct: 214 KEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKN 273
Query: 345 GQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
G+ +A EL EEM+ + PD +TY I C + D A F+ MV +G + ++
Sbjct: 274 GKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSY 333
Query: 405 AAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMK 464
I G+ R ED K + + S+ + Y+ L + + A+ S+M
Sbjct: 334 NTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF 393
Query: 465 NGLRPNVSVYRRVLKHL 481
G+ P++ Y +L L
Sbjct: 394 FGISPDIWTYNILLGGL 410
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 55/112 (49%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI+ + D ++ +M G P TYN +LG LC NG+ A + E+M
Sbjct: 368 YNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQ 427
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
R D +TY I C+ GK + A++ F + +GL+P + T+ + G
Sbjct: 428 KREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSG 479
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 84/193 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I +C+ D E+ + G P +TY ++ LC + + +DA LL +M+
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 252
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+ ITY + + GK A F +MV+ + P + T+++ I G + R +
Sbjct: 253 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRID 312
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + L K + + Y+ L + K + EM + GL N Y ++
Sbjct: 313 EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 372
Query: 479 KHLHTSHQEHMAK 491
+ + A+
Sbjct: 373 QGFFQAGDVDKAQ 385
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 65/176 (36%), Gaps = 36/176 (20%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M +G T+N V+ C Q + A +L +ML PD +T + CR
Sbjct: 110 KMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRN 169
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+ A + ++MV+ G +P + + A I R DA+ +
Sbjct: 170 RVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDF----------------- 212
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL-HTSHQEHMAKCLSS 495
E+ + G+RPNV Y ++ L ++S A+ LS
Sbjct: 213 ------------------FKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSD 250
>gi|255660814|gb|ACU25576.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 418
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ +L EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G A + ++M +GL+P T+ I G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEG 325
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A++Y + + ++ Y+ L S + V A+ +L EM+ GL+ + Y
Sbjct: 326 DLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKLEIGTYT 385
Query: 476 RVL 478
++
Sbjct: 386 MII 388
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 55/115 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +N L+ + D L M+ G +P TY+ ++ LCK + DA EL +
Sbjct: 171 VVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFD 230
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
EML P+ +T+ I C+ G+ D+A + QM+ + L P L T+ I G
Sbjct: 231 EMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 285
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 77/181 (42%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ C+ + + + + + + G P +++N ++ K G + L M
Sbjct: 138 FFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAM 197
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
PD TY + I C+ K D A F++M+ GL P T I G+ R
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRV 257
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ A + + S + Y+ L K + A++++ EM GL+P+ Y +
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTL 317
Query: 478 L 478
+
Sbjct: 318 I 318
>gi|17047023|gb|AAL34928.1|AC079037_1 Putative PPR-repeat protein [Oryza sativa]
gi|31429883|gb|AAP51872.1| hypothetical protein LOC_Os10g02650 [Oryza sativa Japonica Group]
Length = 949
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 83/182 (45%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N++I MC LL ++ GCEP LTYN V+ LC+ + DA L+ M
Sbjct: 402 NLMIIAMCSEGRLDVSYYLLGKLVAYGCEPSVLTYNIVIKCLCEQNRMDDARALITIMQS 461
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
R PD T I + C++G+ + A + F +M K G++P +A + + I R ++
Sbjct: 462 RGVRPDMSTNSIMVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRRLKE 521
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
A + + + ++Y+ L + + + EM+K GL+P Y ++
Sbjct: 522 AEATLRQMIREGLAPDEIIYTSLINGYSLTRQTRNVCRIFDEMLKRGLQPGPHAYGSLIN 581
Query: 480 HL 481
L
Sbjct: 582 GL 583
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 76/193 (39%)
Query: 282 YEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
Y + K V E V YNI+IK +C + R L+ M+ G P T + ++
Sbjct: 419 YLLGKLVAYGCEPSVLTYNIVIKCLCEQNRMDDARALITIMQSRGVRPDMSTNSIMVTAY 478
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
CK G+ A L EM P Y+ IV CR+ + A QM++ GL P
Sbjct: 479 CKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRRLKEAEATLRQMIREGLAPDE 538
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
+ + I GY + + + + + Y L + K N A L
Sbjct: 539 IIYTSLINGYSLTRQTRNVCRIFDEMLKRGLQPGPHAYGSLINGLVKGNKIRKALGYLER 598
Query: 462 MMKNGLRPNVSVY 474
M++ G+ P +Y
Sbjct: 599 MLEEGIAPQTVIY 611
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 62/130 (47%)
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
+A LL+E++ N P I + I+ C G+ DV++ ++V G +P + T+ I
Sbjct: 381 EADHLLDEIVTSNVLPVNIVLNLMIIAMCSEGRLDVSYYLLGKLVAYGCEPSVLTYNIVI 440
Query: 409 KGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLR 468
K R +DA + + + S++ + + K A ++ EM K+G+
Sbjct: 441 KCLCEQNRMDDARALITIMQSRGVRPDMSTNSIMVTAYCKIGEIESALHLFGEMAKDGIE 500
Query: 469 PNVSVYRRVL 478
P+++VY ++
Sbjct: 501 PSIAVYDSII 510
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 99/264 (37%), Gaps = 48/264 (18%)
Query: 263 SCLVSGVRALIEMFSVLGLY-EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
S +V+ + E+ S L L+ EMAK I E ++ Y+ +I +CR K L +
Sbjct: 472 SIMVTAYCKIGEIESALHLFGEMAKDGI---EPSIAVYDSIIVCLCRMRRLKEAEATLRQ 528
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M + G P + Y ++ Q + C + +EML R P Y I + K
Sbjct: 529 MIREGLAPDEIIYTSLINGYSLTRQTRNVCRIFDEMLKRGLQPGPHAYGSLINGLVKGNK 588
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLS-------------- 427
A + +M++ G+ P+ + I +F VVL
Sbjct: 589 IRKALGYLERMLEEGIAPQTVIYTMLINQFFRKGDVRLGLDLVVLMMKTNVAPDLITYGA 648
Query: 428 ------------------ADKYKSSSNMLYSLLASLHDKNNNP------------VMAKN 457
A K K + ML+ +L + D N +A+
Sbjct: 649 LVTGICRNIARRGMRPSLAKKLKEARYMLFRMLPQIIDTRNGKQKDNQICTEEMIQVAQG 708
Query: 458 VLSEMMKNGLRPNVSVYRRVLKHL 481
++ ++ +NG+ P++ +Y ++ L
Sbjct: 709 IIQDLEENGMVPDLHIYNGMINGL 732
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 80/198 (40%), Gaps = 5/198 (2%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L+ M +I K I +EM + + ++ ++ + G P YN ++
Sbjct: 677 LFRMLPQIIDTRNGKQKDNQICTEEM-----IQVAQGIIQDLEENGMVPDLHIYNGMING 731
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
LC+ + DA LL M P+ +TY I + R+G + A FN + G
Sbjct: 732 LCRANKMDDAYSLLSVMDQTGILPNHVTYTILMNNQIRLGDINHAIQLFNSLNSDGCVFD 791
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
T+ FIKG + R ++A ++++ + S Y L L N + +
Sbjct: 792 KITYNTFIKGLSLAGRMKEALSFLLMMHKRGFVPSKASYDKLMELLLAENAIDIVLQLFE 851
Query: 461 EMMKNGLRPNVSVYRRVL 478
+M+ G P + Y +L
Sbjct: 852 DMLFQGYTPRYANYTSLL 869
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
EM G +P TYN ++ CK+ A ++ + M+ PD Y I + C+ G
Sbjct: 248 EMIDRGIQPDAATYNVMIRWYCKSKWVGAAMDIYKVMIRTGVAPDLRCYTILMASLCKDG 307
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFI-------KGYFIFY 415
K A N F++M++ GL P H FI KG+ + +
Sbjct: 308 KLGEAENLFDKMLESGLFP---DHVMFISIARFFPKGWVVLF 346
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITL---TYNYVLGVLCKNGQDADACELLEEML 358
LI+ CR + D+ M+ G E + L Y ++ L ++G+ ++ EM+
Sbjct: 193 LIRVFCREGRLEPALDVFRRMK--GDEHVQLDAYAYTTMIWGLFEHGRVDHGLQMYHEMI 250
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
R PDA TY + I + C+ A + + M++ G+ P L
Sbjct: 251 DRGIQPDAATYNVMIRWYCKSKWVGAAMDIYKVMIRTGVAPDL 293
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 15/139 (10%)
Query: 340 VLCKNGQDADACELLEEMLG-RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
V C+ G+ A ++ M G + DA Y I G+ D +++M+ RG+Q
Sbjct: 196 VFCREGRLEPALDVFRRMKGDEHVQLDAYAYTTMIWGLFEHGRVDHGLQMYHEMIDRGIQ 255
Query: 399 PRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYK-------SSSNMLYSLLASLHDKNNN 451
P AT+ I+ Y K+V + D YK + Y++L + K+
Sbjct: 256 PDAATYNVMIRWYC-------KSKWVGAAMDIYKVMIRTGVAPDLRCYTILMASLCKDGK 308
Query: 452 PVMAKNVLSEMMKNGLRPN 470
A+N+ +M+++GL P+
Sbjct: 309 LGEAENLFDKMLESGLFPD 327
>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 566
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 2/184 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N LI+ C R + L M GC P +TYN +L LCK+G+ DA +L ++
Sbjct: 349 FNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLS 408
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C P I+Y I +VGK ++A +M +GL+P L T + + G +
Sbjct: 409 SKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVH 468
Query: 419 DAYKYV-VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+A K+ L K ++ + S++ L K +A + L +M+ NG +P + Y +
Sbjct: 469 EAIKFFHYLKGFGIKPNAFIYNSIMMGLC-KAQQTSLAIDFLVDMVANGCKPTEASYTTL 527
Query: 478 LKHL 481
+K +
Sbjct: 528 IKGI 531
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 103/247 (41%), Gaps = 10/247 (4%)
Query: 234 GFLPVLISSKALTK--------KGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMA 285
G +P +++ AL + K R++ +L + G + LI + G E A
Sbjct: 99 GKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAYCKSGEIEEA 158
Query: 286 KYVIKKTE--RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
V+ T + Y+ ++ +C R K +L Q C P +T ++ CK
Sbjct: 159 LRVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCK 218
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
A +L EM G+ C PD +TY + I C+ G+ D A F ++ G Q + +
Sbjct: 219 ESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVIS 278
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
H ++ R+ DA K + K S + +++L + + A NVL M
Sbjct: 279 HNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMP 338
Query: 464 KNGLRPN 470
K+G PN
Sbjct: 339 KHGHTPN 345
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 102/231 (44%), Gaps = 8/231 (3%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+ +C SGV +++F+ EM K + V YN+LIK C+ L
Sbjct: 213 IDATCKESGVGQAMKLFN-----EMRG---KGCKPDVVTYNVLIKGFCKEGRLDEAIIFL 264
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
++ GC+ +++N +L LC G+ DA +LL ML + C P +T+ I I + C+
Sbjct: 265 KKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQK 324
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
G A N M K G P + I+G+ + A +++ + + + Y
Sbjct: 325 GLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTY 384
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
++L + K+ A +LS++ G P++ Y V+ L + +A
Sbjct: 385 NILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELA 435
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 114/288 (39%), Gaps = 49/288 (17%)
Query: 249 GIWRVVEVLNQVGGSCLVSGV---RALIEMFSVLGLYEMAKYVIKK-----TERKVSYYN 300
G+ + +++ N++ G V LI+ F G + A +KK + V +N
Sbjct: 221 GVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHN 280
Query: 301 ILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNG--------------- 345
++++ +C + LL M + GC P +T+N ++ LC+ G
Sbjct: 281 MILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKH 340
Query: 346 -------------------QDAD-ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
+ D A E LE M+ R C+PD +TY I + C+ GK D A
Sbjct: 341 GHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDA 400
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY---SLL 442
+Q+ +G P L ++ I G + E A + +L YK L S++
Sbjct: 401 VVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVE--LLEEMCYKGLKPDLITCTSVV 458
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
L + A + G++PN +Y ++ L + Q +A
Sbjct: 459 GGL-SREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLA 505
>gi|255548471|ref|XP_002515292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545772|gb|EEF47276.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/371 (20%), Positives = 154/371 (41%), Gaps = 7/371 (1%)
Query: 132 QVSEIIELLRSGDSETESKLLSMSVSLSNASVIEILRVLNSEKVSALCFLKYMREIMPEF 191
+V ++I+ L + D E+ L ++LS+ VI++L + A F + E F
Sbjct: 67 RVCKVIDELFALDRNMEAVLDECGINLSHDLVIDVLERFCHARKPAFRFFCWAGEKQG-F 125
Query: 192 YKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIW 251
+S + ++ + +ET+ +L + V L F ++ KK +
Sbjct: 126 EHDSRTYNSMMSILAKTRQFETVVSMLEEMGGKGV-LTMDTFSIAMRAFAAAKERKKAV- 183
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVS----YYNILIKEMC 307
+ E++ + V + L++ L + A+ + + + + + Y +L+ C
Sbjct: 184 AMFELMKKYNYKVGVETINHLLDSLGRAKLGKEAQALFENLKGRFTPNLRTYTVLLNGWC 243
Query: 308 RRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAI 367
+ + + EM G +P + +N +L L ++ Q +DA +L M + PD
Sbjct: 244 KVKNLMEAGSVWNEMIDKGFKPDIVAHNIMLEGLLRSKQRSDAIKLFMVMKAKGPSPDVR 303
Query: 368 TYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLS 427
+Y I I Y CR K + A +F +M+ G +P A + I G+ R + Y +
Sbjct: 304 SYTILIRYLCRQSKMEEAVEYFQEMIDSGCKPDAAVYTCLITGFGNRKRMDMVYDLLKEM 363
Query: 428 ADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQE 487
++ + Y+ L L + P A + +M ++G+ P + Y ++K +
Sbjct: 364 KEEGCPPDGLTYNALIKLMTRLKMPDDAARIYKKMTQSGIEPTIHTYNMIMKSYFQTRNY 423
Query: 488 HMAKCLSSRYS 498
M + + S
Sbjct: 424 EMGRAVWDEMS 434
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 67/146 (45%), Gaps = 4/146 (2%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
DLL EM++ GC P LTYN ++ ++ + DA + ++M P TY + +
Sbjct: 358 DLLKEMKEEGCPPDGLTYNALIKLMTRLKMPDDAARIYKKMTQSGIEPTIHTYNMIMKSY 417
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
+ +++ +++M ++G P ++ I G R +A KY+ +K +
Sbjct: 418 FQTRNYEMGRAVWDEMSRKGFCPDDNSYTVLIGGLISQGRSGEACKYLEEMLEKGMKAPQ 477
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEM 462
+ Y+ + + NP ++L E+
Sbjct: 478 LDYNKFGADLSRGGNP----DILEEL 499
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Query: 271 ALIEMFSVLGLYEMAKYVIKK-----TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI++ + L + + A + KK E + YN+++K + +++ R + EM +
Sbjct: 377 ALIKLMTRLKMPDDAARIYKKMTQSGIEPTIHTYNMIMKSYFQTRNYEMGRAVWDEMSRK 436
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P +Y ++G L G+ +AC+ LEEML + + Y F R G D+
Sbjct: 437 GFCPDDNSYTVLIGGLISQGRSGEACKYLEEMLEKGMKAPQLDYNKFGADLSRGGNPDIL 496
Query: 386 FNFFNQMV---KRGLQPRLATHAAFIK 409
++ K G+ LA+ A I+
Sbjct: 497 EELAQRLKFSGKFGVSNVLASWAGMIQ 523
>gi|297604045|ref|NP_001054898.2| Os05g0207200 [Oryza sativa Japonica Group]
gi|218196267|gb|EEC78694.1| hypothetical protein OsI_18845 [Oryza sativa Indica Group]
gi|222630569|gb|EEE62701.1| hypothetical protein OsJ_17504 [Oryza sativa Japonica Group]
gi|255676129|dbj|BAF16812.2| Os05g0207200 [Oryza sativa Japonica Group]
Length = 467
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 64/123 (52%), Gaps = 3/123 (2%)
Query: 278 VLGLYEMAKYVIKKTERKVSYYNILIKEMCR-RCDFKGPRDLLVEMRQVGCEPITLTYNY 336
V+ L E K K R+V +N +I C D L +M++ GC+P +++YN
Sbjct: 282 VVSLLEEMKEKGIKVGREV--HNSMIAGFCEDEGDLDAAFAALDDMQKGGCKPDSVSYNT 339
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
++G LCK G+ DA EL+E+M R C PD +TY C G F A FN+MV +G
Sbjct: 340 LVGGLCKMGRWRDASELVEDMPRRGCRPDVVTYRRLFDGICDAGGFSEARRVFNEMVFKG 399
Query: 397 LQP 399
P
Sbjct: 400 FAP 402
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADAC-ELLEEMLGRNCHPDAITYEIFIVYS 376
LL EM++ G + +N ++ C++ D DA L++M C PD+++Y +
Sbjct: 285 LLEEMKEKGIKVGREVHNSMIAGFCEDEGDLDAAFAALDDMQKGGCKPDSVSYNTLVGGL 344
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
C++G++ A M +RG +P + T+ G
Sbjct: 345 CKMGRWRDASELVEDMPRRGCRPDVVTYRRLFDG 378
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Query: 317 DLLVEMRQVGCEPITLTYNYVL-GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
+LL E R G P TYN ++ + +G +AC L +EML R P +T+ +
Sbjct: 141 ELLSECRGSGIHPDACTYNILMRAAVADSGSVDNACLLFDEMLQRGIAPTVVTFGTLVTA 200
Query: 376 SCRVGKFDVAFNFFNQM-VKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
C G+ + AF M ++ ++P +A+ +K + +DA++
Sbjct: 201 FCEAGRLEEAFKVKEVMSLQYNIRPNAHVYASLMKALCEKGKVDDAHR 248
Score = 42.0 bits (97), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 65/164 (39%), Gaps = 10/164 (6%)
Query: 324 QVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHP--DAITYEIFIVYSCRVGK 381
Q P Y ++ LC+ G+ DA L EEM+ N P D+ Y R+GK
Sbjct: 220 QYNIRPNAHVYASLMKALCEKGKVDDAHRLKEEMVS-NSEPLVDSGAYATLARALFRLGK 278
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS----NM 437
+ +M ++G++ H + I G F E + D + ++
Sbjct: 279 KGEVVSLLEEMKEKGIKVGREVHNSMIAG---FCEDEGDLDAAFAALDDMQKGGCKPDSV 335
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y+ L K A ++ +M + G RP+V YRR+ +
Sbjct: 336 SYNTLVGGLCKMGRWRDASELVEDMPRRGCRPDVVTYRRLFDGI 379
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 39/82 (47%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ +C+ ++ +L+ +M + GC P +TY + +C G ++A + EM+
Sbjct: 337 YNTLVGGLCKMGRWRDASELVEDMPRRGCRPDVVTYRRLFDGICDAGGFSEARRVFNEMV 396
Query: 359 GRNCHPDAITYEIFIVYSCRVG 380
+ P F+ + R G
Sbjct: 397 FKGFAPSKDGVRKFVAWIEREG 418
>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Glycine max]
Length = 642
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 139/344 (40%), Gaps = 18/344 (5%)
Query: 143 GDSETESKLLSMSVSLSNASVIEILRVLNSEKVSALCFLKYMREIMPEFYKNSDICSLVI 202
GD S + S + SL S+ E+L + E+ FL+ +M + Y + + +
Sbjct: 60 GDLSFYSLIESHASSLDFRSLEEVLHQMKRER---RVFLEKNFIVMFKAYGKAHLPEKAV 116
Query: 203 DNCGRLDDYETMRQLLNDFN-----VYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVL 257
D R+ +Q + FN + Q L +A F +++SK+L ++
Sbjct: 117 DLFHRMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLV 176
Query: 258 NQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRD 317
+ C + V IE+F + L A Y+ L+ +C+
Sbjct: 177 --IKAMCRLGLVDKAIEVFREIPLRNCAP--------DNYTYSTLMHGLCKEERIDEAVS 226
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
LL EM+ G P + +N ++ LCK G A +L++ M + C P+ +TY + C
Sbjct: 227 LLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLC 286
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
GK + A + NQMV P T I G+ + R D + +V + +
Sbjct: 287 LKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEY 346
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+YS L S K A + EM+ G PN VY ++ L
Sbjct: 347 VYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGL 390
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 82/160 (51%), Gaps = 6/160 (3%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
+LV + G Y+ ++ LCK G+ A EL +EM+G+ C P+ I Y I C
Sbjct: 332 VLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLC 391
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSS--- 434
R GK D A F ++M +G P T+++ ++GYF D++K +++ + ++
Sbjct: 392 REGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYF---EAGDSHKAILVWKEMANNNCIH 448
Query: 435 SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + YS+L + K+ + A V +M+ G++ +V Y
Sbjct: 449 NEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAY 488
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 82/202 (40%), Gaps = 35/202 (17%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N+LI +C++ D L+ M GC P +TYN ++ LC G+ A LL +M+
Sbjct: 243 FNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMV 302
Query: 359 GRNCHPDAITYEIFI-----------------------------VYS------CRVGKFD 383
C P+ +T+ I VYS C+ GKF+
Sbjct: 303 SNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFN 362
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
A + +MV +G P ++A I G + ++A ++ +K ++ YS L
Sbjct: 363 QAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLM 422
Query: 444 SLHDKNNNPVMAKNVLSEMMKN 465
+ + + A V EM N
Sbjct: 423 RGYFEAGDSHKAILVWKEMANN 444
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 55/113 (48%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ LI +CR R L EM+ G P + TY+ ++ + G A + +EM
Sbjct: 383 YSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMA 442
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
NC + + Y I I C+ GKF A + QM+ RG++ + +++ I G+
Sbjct: 443 NNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGF 495
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 79/205 (38%), Gaps = 18/205 (8%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ILI +C+ F + +M G + + Y+ ++ C +L +ML
Sbjct: 453 YSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQML 512
Query: 359 --GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
G PD ITY I + C A + N M+ +G P T F+
Sbjct: 513 CQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIFL-------- 564
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
K + + + + L L+ L K + A ++ MM L P S +
Sbjct: 565 -----KTLRENMNPPQDGREFLDELVVRL-VKRQRTIGASKIIEVMMHKFLLPKASTWAM 618
Query: 477 VLKHLHTSHQEHMAKCLSSRYSSLS 501
V++ + +++ K +S +S LS
Sbjct: 619 VVQQV--CKPKNVRKAISECWSRLS 641
>gi|302791145|ref|XP_002977339.1| hypothetical protein SELMODRAFT_32460 [Selaginella moellendorffii]
gi|300154709|gb|EFJ21343.1| hypothetical protein SELMODRAFT_32460 [Selaginella moellendorffii]
Length = 336
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 107/263 (40%), Gaps = 16/263 (6%)
Query: 226 VCLNEKAFGFLPVLI---SSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLY 282
VC N A GF + ++K L K W + + L + I +F +
Sbjct: 3 VCWNAIATGFSQCGLLDETTKILDKMPAWNLATWNTLLTSHSLQGNLTGAIRVF-----H 57
Query: 283 EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLC 342
EM K + YN LI +C L+ EM GC P TYN ++ LC
Sbjct: 58 EMPD----KNLPNMVTYNSLIHGLCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLC 113
Query: 343 KNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLA 402
K G+ +A L EM + C+PD ITY I C++ + ++A F+ M+K+ P +
Sbjct: 114 KTGRVPEANRLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVV 173
Query: 403 THAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM 462
T ++GY +DA + + S Y+ L K V A VL M
Sbjct: 174 TFPTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDDFCKVKRMVEAHRVLKRM 233
Query: 463 MKNG----LRPNVSVYRRVLKHL 481
K G + ++ YR ++ L
Sbjct: 234 AKGGSNKNCKADMFAYRMMMDGL 256
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 6/152 (3%)
Query: 263 SCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
SCL+ G L + L++ + + V + L++ C LL EM
Sbjct: 141 SCLIGGFCKLDRINMACTLFD--DMLKQAALPDVVTFPTLVEGYCNAGLVDDAERLLEEM 198
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML----GRNCHPDAITYEIFIVYSCR 378
C P TY ++ CK + +A +L+ M +NC D Y + + CR
Sbjct: 199 VASDCSPDVYTYTSLVDDFCKVKRMVEAHRVLKRMAKGGSNKNCKADMFAYRMMMDGLCR 258
Query: 379 VGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
G+ A + + G PR + A I+G
Sbjct: 259 TGRMSAALELLEAIKQSGTPPRHDIYVALIRG 290
>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
Length = 951
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 4/183 (2%)
Query: 317 DLLVEMRQV----GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIF 372
D+++E+ ++ G YN ++ VLC +G +A +L+EML R PD IT+
Sbjct: 694 DVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNAL 753
Query: 373 IVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYK 432
I+ C+ D AF + QM+ +GL P +AT + G R +A +
Sbjct: 754 ILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGL 813
Query: 433 SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKC 492
+N+ Y +L + + K +N V A + EM+ G P S Y ++ + + AK
Sbjct: 814 EPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKE 873
Query: 493 LSS 495
L S
Sbjct: 874 LFS 876
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 7/194 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+ I +C F + L EMR G EP TYN ++ C+ G+ + A +LL+EM
Sbjct: 575 YNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMK 634
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+ ITY +V G A N+M G P TH ++ R +
Sbjct: 635 RNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPD 694
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASL---HDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ L + +Y+ L + H N A VL EM+ G+ P+ +
Sbjct: 695 VILEIHELMMGAGLHADITVYNTLVHVLCCHGMARN---ATVVLDEMLTRGIAPDTITFN 751
Query: 476 R-VLKHLHTSHQEH 488
+L H +SH ++
Sbjct: 752 ALILGHCKSSHLDN 765
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 91/223 (40%), Gaps = 2/223 (0%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCD 311
R ++ L+ VG + L+ G + +M + L + E + + V YN L+ D
Sbjct: 180 RGIDGLDVVGWNALIDGYCKVQDMAAALAVVE--RMTTQGVALDVVGYNSLVAGFFHSGD 237
Query: 312 FKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEI 371
+++ M+ G EP +TY ++G CK +A L E M+ PD +T
Sbjct: 238 ADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSA 297
Query: 372 FIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKY 431
+ CR G+F A+ F +M K G+ P T+ I R ++ + +
Sbjct: 298 LVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRG 357
Query: 432 KSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
++Y+ L K AK+VL + + PN Y
Sbjct: 358 VVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTY 400
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 79/178 (44%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
L+ + + + +G L +M + G + Y ++ L K G A ++ +E++ +N
Sbjct: 508 LVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKN 567
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
PDA+ Y +FI C +GKF A +F +M GL+P AT+ I + A
Sbjct: 568 LSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKAL 627
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
K + + + Y+ L + AK +L+EM G P ++RVL+
Sbjct: 628 KLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQ 685
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 86/190 (45%), Gaps = 4/190 (2%)
Query: 279 LGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
LGL + + V + + Y L+ + + + +D+L + P +TY ++
Sbjct: 347 LGL--LGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLV 404
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
C+ G A ++L +M ++ P+ +T+ I + G A ++ +M G+
Sbjct: 405 DAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIA 464
Query: 399 PRLATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKN 457
P + T+ I G+F F E A Y + + ++++ ++ SL+ L KN N A+
Sbjct: 465 PNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLR-KNGNIEGAEA 523
Query: 458 VLSEMMKNGL 467
+ +M + GL
Sbjct: 524 LFKDMDERGL 533
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 82/227 (36%), Gaps = 35/227 (15%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGR- 360
L+ +CR F L EM ++G P +TY ++ L K + +++ LL EM+ R
Sbjct: 298 LVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRG 357
Query: 361 ----------------------------------NCHPDAITYEIFIVYSCRVGKFDVAF 386
N P+ +TY + + CR G D A
Sbjct: 358 VVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAE 417
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
QM ++ + P + T ++ I G A Y+ D + + + Y L
Sbjct: 418 QVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGF 477
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
K A +V +M+ G+ N V ++ L + A+ L
Sbjct: 478 FKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEAL 524
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 82/209 (39%), Gaps = 5/209 (2%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
AL++ G E AK V++ + Y +L+ CR + G +L++M +
Sbjct: 367 ALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEK 426
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
P +T++ ++ L K G A + + +M P+ +TY I + + A
Sbjct: 427 SVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAA 486
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
+ + M+ G++ + + G E A ++ ++ Y+ L
Sbjct: 487 LDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDG 546
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
K N A V E+M+ L P+ VY
Sbjct: 547 LFKTGNMPAAFKVGQELMEKNLSPDAVVY 575
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 54/116 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
++ +N L+ + +L +M++VG EP LTY+ ++ K +A L
Sbjct: 782 IATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYC 841
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
EM+ + P A TY + + G + A F++M +RG+ +T+ + G+
Sbjct: 842 EMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGW 897
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 96/229 (41%), Gaps = 9/229 (3%)
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDF 312
V V V G + +G+ +++F EM K K Y ILI +C+
Sbjct: 1016 AVTVTTLVKGVWMENGIPDAVQLFD-----EMTK---KGLLGDAKTYGILINGLCK-ARK 1066
Query: 313 KGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIF 372
G L E + C+ TY ++ LCK+G +A ++ EM+G PD + Y
Sbjct: 1067 TGLAIKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSL 1126
Query: 373 IVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYK 432
+ CR G+ A FF +M RG+ + T+ + I G +++ ++ L D+
Sbjct: 1127 MDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGF 1186
Query: 433 SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
S +++L K A+ +L M G P++ Y ++ L
Sbjct: 1187 SPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGL 1235
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 13/213 (6%)
Query: 271 ALIEMFSVLGLY-EMAKYVIKKTERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQV 325
+LI S GL+ E+ ++ +R S + ILI +C+ + +L MR
Sbjct: 1160 SLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHK 1219
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G EP LTYN ++ LC GQ DA +L E + R + +Y I I C+ K D A
Sbjct: 1220 GKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEA 1279
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML----YSL 441
F FF +M +GL+P T+ I R A K V + ++ L Y +
Sbjct: 1280 FRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFV----EMQTCGQFLKLSTYCV 1335
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
L KN + A ++ + K +PN+ V+
Sbjct: 1336 LLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVF 1368
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 83/198 (41%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ L+ +CR K + EM G TYN ++ L + G + L
Sbjct: 1120 VVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLN 1179
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+ R PDA T+ I I C+ GK A M +G +P + T+ + G +
Sbjct: 1180 LMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVG 1239
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ EDA K AD+ + Y++L + + K+ A EM GL+P+ Y
Sbjct: 1240 QLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYN 1299
Query: 476 RVLKHLHTSHQEHMAKCL 493
++ L S + A+ L
Sbjct: 1300 TLIGALCQSGRVRTAQKL 1317
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 82/192 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C+ + + L VEM+ G TY +L LCKNG +A +L + +
Sbjct: 1298 YNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIK 1357
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ + I + CR GK + A+ F+++ K GL+P + I G
Sbjct: 1358 KTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLS 1417
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A K + +K ++ ++++ K N A +L EM P+ +V +L
Sbjct: 1418 EAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477
Query: 479 KHLHTSHQEHMA 490
Q H A
Sbjct: 1478 CLASFDPQWHAA 1489
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 78/179 (43%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI + R +K L M G P T+ ++ LCK G+ +A ++LE
Sbjct: 1155 VYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILE 1214
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M + PD +TY + C VG+ + A F + RG++ + ++ I GY
Sbjct: 1215 LMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQ 1274
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ ++A+++ K S + Y+ L ++ A+ + EM G +S Y
Sbjct: 1275 KIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTY 1333
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 75/186 (40%), Gaps = 2/186 (1%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K E + YN L+ +C + L + G + +YN ++ CK+ + +
Sbjct: 1219 KGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDE 1278
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A EEM + P +TY I C+ G+ A F +M G +L+T+ +
Sbjct: 1279 AFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLD 1338
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNM-LYSLLASLHDKNNNPVMAKNVLSEMMKNGLR 468
G E+A + S K + N+ ++S+L + A E+ KNGL
Sbjct: 1339 GLCKNGHLEEAMD-LFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLE 1397
Query: 469 PNVSVY 474
P+ Y
Sbjct: 1398 PDTIAY 1403
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 51/115 (44%)
Query: 295 KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
K+S Y +L+ +C+ + DL +++ +P ++ +L +C+ G+ +A +
Sbjct: 1329 KLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQF 1388
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
+E+ PD I Y I I C G A QM ++G P T I+
Sbjct: 1389 DEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQ 1443
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 88/195 (45%)
Query: 280 GLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
LY + V + V YN +I +C+ DLL M + G P +TYN ++
Sbjct: 170 ALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLIS 229
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
LC +G+ +DA ++ M R +PD T+ I + G+ A F+ +M++R L P
Sbjct: 230 GLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDP 289
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
+ T++ I G ++ R ++A + K + YS+L + + K+ +
Sbjct: 290 DIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLF 349
Query: 460 SEMMKNGLRPNVSVY 474
EM + G+ N Y
Sbjct: 350 CEMSQRGVVRNTVTY 364
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 76/175 (43%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
NIL+ CR L +M ++G EP +T+ +L C+ + DA + ++M+G
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG 179
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
P+ + Y I C+ + D A + N+M K G+ P + T+ + I G R+ D
Sbjct: 180 MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSD 239
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
A + V + ++ L K A+ EM++ L P++ Y
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTY 294
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 104/248 (41%), Gaps = 40/248 (16%)
Query: 185 REIMPEFYKNSDICSLVIDNC---GRLDD----YETM--RQLLNDFN-----VYQVCL-- 228
REI P+ + + + ID C GR+ + YE M R L D +Y +C+
Sbjct: 250 REIYPDVFTFNAL----IDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYS 305
Query: 229 ----NEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEM 284
E+ FGF+ ++K VV + G C V +++F EM
Sbjct: 306 RLDEAEEMFGFM--------VSKGCFPDVVTYSILINGYCKSKKVEHGMKLFC-----EM 352
Query: 285 AKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKN 344
++ + R Y ILI+ CR ++ M G P +TYN +L LC N
Sbjct: 353 SQ---RGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDN 409
Query: 345 GQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
G+ A +L +M D +TY I I C+ G+ A++ + + +GL P + T+
Sbjct: 410 GKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTY 469
Query: 405 AAFIKGYF 412
+ G +
Sbjct: 470 TTMMLGLY 477
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
DL M Q P ++ +L + K + L E+M + T I +
Sbjct: 67 DLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCF 126
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA-YKYVVLSADKYKSSS 435
CR + +A +F +M+K G +P + T + + G+ R DA Y + + YK +
Sbjct: 127 CRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNV 186
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL----HTSHQEHMAK 491
+ +++ L K+ A ++L+ M K+G+ P+V Y ++ L S M
Sbjct: 187 VIYNTIIDGLC-KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVS 245
Query: 492 CLSSR 496
C++ R
Sbjct: 246 CMTKR 250
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 50/101 (49%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+L+ +C + +L +M++ G + +TYN ++ +CK G+ ADA ++ +
Sbjct: 399 YNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLN 458
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
+ PD TY ++ + G A F +M + G+ P
Sbjct: 459 CQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILP 499
>gi|224129154|ref|XP_002320514.1| predicted protein [Populus trichocarpa]
gi|222861287|gb|EEE98829.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 77/158 (48%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
EMR+ P + T+N VL LCK+G+ A E+L EM P+ ++Y I C G
Sbjct: 189 EMRRCRISPNSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCNKG 248
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+A N M K GL+P + T + I G+ + +A ++ + + + Y+
Sbjct: 249 LLSIATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYN 308
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
L + + + N MA V EMM+NG++ ++ Y ++
Sbjct: 309 TLINGYGQVGNSNMAGKVYEEMMRNGVKADILTYNALI 346
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 105/256 (41%), Gaps = 9/256 (3%)
Query: 244 ALTKKG-IWRVVEVLNQ---VGGSCLVSGVRALIEMFSVLGLYEMA---KYVIKKT--ER 294
AL K G + + VEVL + VG + V LI GL +A K ++ K E
Sbjct: 208 ALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCNKGLLSIATKLKNLMGKNGLEP 267
Query: 295 KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
V +N LI C+ EM+ + P T+TYN ++ + G A ++
Sbjct: 268 NVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNTLINGYGQVGNSNMAGKVY 327
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
EEM+ D +TY I+ C+ GK A ++ K L P +T++A I G
Sbjct: 328 EEMMRNGVKADILTYNALILGLCKEGKTKKAAFLVKELDKENLVPNASTYSALISGQCAR 387
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ A++ + + +L S KN + A NVL +M + + +
Sbjct: 388 KNSDRAFQLYKSMVRSGCHPNEQTFKMLTSAFVKNEDFEGAFNVLMDMFARSMASDSNTL 447
Query: 475 RRVLKHLHTSHQEHMA 490
+ L +E++A
Sbjct: 448 LEIYDGLCQCGKENLA 463
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 126/285 (44%), Gaps = 28/285 (9%)
Query: 211 YETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVR 270
YE +++L++ +C N F P+L+ S K+ +W V N++ L GV
Sbjct: 310 YERAKRVLDEMLGVGLCPNAATFN--PMLVES--CRKEDVWEAERVFNEM----LQRGVV 361
Query: 271 A-LIEMFSVLGLY----EMAKYVIKKTERK-------VSYYNILIKEMCRRCDFKGPRDL 318
LI S++G++ E+ + + + K Y ILI CR D G +
Sbjct: 362 PDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKM 421
Query: 319 LVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCR 378
EM + GC +TYN +L LC+ DA EL +EM+ R PD T I C+
Sbjct: 422 RNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCK 481
Query: 379 VGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK--YVVLSADKYKS--S 434
G A + F M R L+P + T+ + G+ E A + Y ++S + + S S
Sbjct: 482 DGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYIS 541
Query: 435 SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
++L + SL + A + EM + G++P + ++K
Sbjct: 542 FSILINGFCSLGLVSE----AFRLWDEMKEKGIKPTLVTCNTIIK 582
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 108/245 (44%), Gaps = 23/245 (9%)
Query: 251 WRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSY-----YNILIKE 305
W+V E + G V + ++ G + + + E K Y YN L+
Sbjct: 209 WKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNA 268
Query: 306 MCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPD 365
CRR L+ M G +P TYN ++ LCK G A +L+EMLG P+
Sbjct: 269 YCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPN 328
Query: 366 AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR--------- 416
A T+ +V SCR A FN+M++RG+ P L + ++ + +F R
Sbjct: 329 AATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVG---VFSRNGELGRALA 385
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
Y + K V L D ++Y++L + + +N++ A + +EM++ G +V Y
Sbjct: 386 YFEKMKGVGLVPD------TVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNT 439
Query: 477 VLKHL 481
+L L
Sbjct: 440 LLNGL 444
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 90/205 (43%), Gaps = 5/205 (2%)
Query: 271 ALIEMFSVLGLYEMAK---YVIKKTERKVSY--YNILIKEMCRRCDFKGPRDLLVEMRQV 325
L++ F +G E AK Y + E SY ++ILI C L EM++
Sbjct: 509 TLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEK 568
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G +P +T N ++ + G + A + L M+ PD ITY I + FD A
Sbjct: 569 GIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRA 628
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
F N M +RGL P L T+ A + G+ R ++A + DK + Y+ L +
Sbjct: 629 FFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLING 688
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPN 470
+ +N A V EM++ G P+
Sbjct: 689 YVSKDNMKEAFRVHDEMLQRGFVPD 713
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 87/202 (43%), Gaps = 6/202 (2%)
Query: 292 TERKV--SYYNI--LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQD 347
ER V +Y + LI C+ + L M +P +TYN ++ CK G+
Sbjct: 461 VERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEM 520
Query: 348 ADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAF 407
A EL +M+ R P I++ I I C +G AF +++M ++G++P L T
Sbjct: 521 EKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTI 580
Query: 408 IKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
IKGY A ++ + + Y+ L + K N A +++ M + GL
Sbjct: 581 IKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGL 640
Query: 468 RPNVSVYRRVLKHL--HTSHQE 487
PN+ Y +L H QE
Sbjct: 641 LPNLVTYNAILGGFSRHGRMQE 662
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 89/201 (44%), Gaps = 4/201 (1%)
Query: 275 MFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
M L L+E ++ + V YN L+ C+ + + ++L +M P +++
Sbjct: 485 MTKALSLFE--TMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISF 542
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
+ ++ C G ++A L +EM + P +T I R G A +F N M+
Sbjct: 543 SILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMIS 602
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPV 453
G+ P T+ I + ++ A+ +++ + ++ N++ Y+ + ++
Sbjct: 603 EGVPPDCITYNTLINSFVKEENFDRAF-FLINNMEERGLLPNLVTYNAILGGFSRHGRMQ 661
Query: 454 MAKNVLSEMMKNGLRPNVSVY 474
A+ VL +M+ G+ P+ S Y
Sbjct: 662 EAEMVLHKMIDKGINPDKSTY 682
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 89/186 (47%), Gaps = 5/186 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNI++ +C+ + M + GC +TY+ ++ C G + A EL ML
Sbjct: 295 YNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRML 354
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R C P+ ++Y I I CR GK A+ +F ++++R L P + T AF+ G + R +
Sbjct: 355 DRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHG--LCQRLD 412
Query: 419 DAYKYVVL--SADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
V L S +S N+ YS+L + +A + EM+ G+ P+V V+
Sbjct: 413 TVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFN 472
Query: 476 RVLKHL 481
+++ L
Sbjct: 473 TLIRWL 478
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 76/167 (45%)
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
C P + + V+ LC+ + +A +LE + C PD +TY +FI C+ + D AF
Sbjct: 3 CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
+M ++ P T+ A + G R ++A + +K S + Y+++
Sbjct: 63 QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
K A+ + +M+ NG RP+ VY ++K L S + A L
Sbjct: 123 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYAL 169
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 10/215 (4%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPIT 331
L E FSVL + V E YN+ I +C+ LL +M + C P T
Sbjct: 23 LDEAFSVL-----ERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTT 77
Query: 332 LTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQ 391
+TY ++ L K G+ +A +LE+M+ + P TY + I + G+ + A F
Sbjct: 78 VTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVD 137
Query: 392 MVKRGLQPRLATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSNMLYSLLASLHD--- 447
M+ G +P + A IKG + E+AY Y +A K+ +++ SL D
Sbjct: 138 MLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLC 197
Query: 448 KNNNPVMAKNVL-SEMMKNGLRPNVSVYRRVLKHL 481
K + A+ V E ++ G P+ Y ++ L
Sbjct: 198 KAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGL 232
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 10/179 (5%)
Query: 244 ALTKKG-IWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNIL 302
A+ ++G + VV + G C V A +E+F + + + E + YNI+
Sbjct: 317 AMEERGCVATVVTYSALMDGFCSEGNVSAAVELFR--------RMLDRGCEPNLVSYNII 368
Query: 303 IKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKN-GQDADACELLEEMLGRN 361
I+ +CR ++ Q P T+N L LC+ +D EL E M+ +
Sbjct: 369 IRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQG 428
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
P+ +Y I + CR G +VA F +MV RG+ P + I+ I R ++A
Sbjct: 429 TSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEA 487
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 78/194 (40%), Gaps = 15/194 (7%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQV--------GCEPITLTYNYVLGVLCKNGQD 347
V Y LI +C K R ++E RQV G P +TY ++ LCK G+
Sbjct: 186 VVTYTSLIDGLC-----KAGR--ILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRV 238
Query: 348 ADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAF 407
+ CE EM R PDA+TY I + A + QM++ G T+
Sbjct: 239 EEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNII 298
Query: 408 IKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
+ G R +AY + ++ ++ + YS L N A + M+ G
Sbjct: 299 LDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGC 358
Query: 468 RPNVSVYRRVLKHL 481
PN+ Y +++ L
Sbjct: 359 EPNLVSYNIIIRGL 372
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Query: 296 VSYYNILIKEMCRRCD-FKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
V +N + +C+R D +L M G P +Y+ ++ +C+ G A E+
Sbjct: 397 VYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIF 456
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
EM+ R PD + + I + C G+ D A F ++ +R P ++ + + G
Sbjct: 457 REMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRS-APDAWSYWSLLDGLSRC 515
Query: 415 YRYEDA 420
R E+A
Sbjct: 516 ERMEEA 521
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 108/240 (45%), Gaps = 8/240 (3%)
Query: 242 SKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNI 301
S+ + K+ VV + G +V ++ + +F+ + ++K + V +NI
Sbjct: 228 SEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFN--------QMLLKNIKPDVYTFNI 279
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
L+ +C+ + K R++L M + G + +TYN ++ Q+ A + M R
Sbjct: 280 LVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRG 339
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
PD +Y I I C+ D A N F +M + + P T+ + I G + R DA+
Sbjct: 340 VTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAW 399
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
V ++ + + + YS L KN+ A +++++ G++PN+ Y ++ L
Sbjct: 400 DLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGL 459
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 7/203 (3%)
Query: 285 AKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
A +V R+ V Y+I+I +C+ +L EM P T+TYN ++
Sbjct: 328 ATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLID 387
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
L K G+ +DA +L+ EM R D ITY + C+ + D A ++ +G+QP
Sbjct: 388 GLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQP 447
Query: 400 RLATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNV 458
+ T+ + G R +DA Y L Y M Y+++ + K A ++
Sbjct: 448 NIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKM-YNVMVNGLCKEGLFDEALSL 506
Query: 459 LSEMMKNGLRPNVSVYRRVLKHL 481
+S+M NG P+ Y +++ L
Sbjct: 507 VSKMEDNGCIPDAVTYETLVRAL 529
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 80/183 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI +C+ + + +L ++ + +P + YN ++ LCK+ A +L EM+
Sbjct: 172 YGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMI 231
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD +TY I VG+ A FNQM+ + ++P + T + G +
Sbjct: 232 VKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMK 291
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + + + S+ + Y+ L + A V + M + G+ P+V Y ++
Sbjct: 292 KARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMI 351
Query: 479 KHL 481
L
Sbjct: 352 NGL 354
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/237 (19%), Positives = 90/237 (37%), Gaps = 35/237 (14%)
Query: 289 IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
+K+ + + +NILI C +L ++ ++G P T+T ++ LC NG+
Sbjct: 92 LKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVR 151
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFF------------------- 389
+A ++++ + H D ++Y I C+ G+ A
Sbjct: 152 EALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTII 211
Query: 390 ----------------NQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKS 433
++M+ + + P + T+ I G I R ++A K
Sbjct: 212 DSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIK 271
Query: 434 SSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
+++L K A+NVL+ M+K G+ N+ Y ++ QE+ A
Sbjct: 272 PDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKA 328
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 68/168 (40%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI + + DL+ EM G +TY+ +L LCKN Q A L+ ++
Sbjct: 382 YNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIK 441
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+ TY I + C+ G+ A + ++ +G + + + G ++
Sbjct: 442 DQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFD 501
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNG 466
+A V D + Y L +N+ A +L EM+ G
Sbjct: 502 EALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQG 549
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 62/154 (40%), Gaps = 1/154 (0%)
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
+PI +N +L L K A ++M + PD T+ I I C +G + AF+
Sbjct: 62 QPI-FEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFS 120
Query: 388 FFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHD 447
++ K G P T IKG + + +A + K + Y L +
Sbjct: 121 VLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLC 180
Query: 448 KNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K A VL ++ ++PNV +Y ++ L
Sbjct: 181 KTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSL 214
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 69/160 (43%), Gaps = 4/160 (2%)
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
+E++Q+ +P T+N ++ C G A +L ++ HPD +T I C
Sbjct: 90 MELKQI--QPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLN 147
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN-ML 438
GK A +F + ++ +G ++ I G A + V+ D N ++
Sbjct: 148 GKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQ-VLRKIDGLLVQPNVVM 206
Query: 439 YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
Y+ + K+ + A ++ SEM+ + P+V Y ++
Sbjct: 207 YNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLI 246
>gi|242088695|ref|XP_002440180.1| hypothetical protein SORBIDRAFT_09g027340 [Sorghum bicolor]
gi|241945465|gb|EES18610.1| hypothetical protein SORBIDRAFT_09g027340 [Sorghum bicolor]
Length = 437
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 7/184 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNI++K +C R F G R +L EM G P +T+N ++G C+ G+ A A +L++EM
Sbjct: 164 YNIILKGVCHRDGFSGARVVLDEMLARGLRPTVVTFNTLVGSACREGELAAAEQLMDEMA 223
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R+ P+A+TY + + C G++D A M R QP + + +
Sbjct: 224 RRSVPPNAVTYALLMQGLCDAGRYDDAKKLLFDMEYRDCQPDVTNYGVLMSACAA---CG 280
Query: 419 DAYKYVVLSADKYK---SSSNMLYSLLASLHDKNNNPVMAKNVLSEM-MKNGLRPNVSVY 474
DA L +D K + + Y++L A L EM +K+G P+ + Y
Sbjct: 281 DAGGIRGLISDMRKRKLTPDDASYNVLIKCLCDAGKVDEAHRALVEMQLKDGTVPSAATY 340
Query: 475 RRVL 478
R +L
Sbjct: 341 RVLL 344
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%)
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
RD+L E ++G ++YN +L +C + A +L+EML R P +T+ +
Sbjct: 146 RDMLPEAPKLGVRTNAVSYNIILKGVCHRDGFSGARVVLDEMLARGLRPTVVTFNTLVGS 205
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
+CR G+ A ++M +R + P T+A ++G RY+DA K + +
Sbjct: 206 ACREGELAAAEQLMDEMARRSVPPNAVTYALLMQGLCDAGRYDDAKKLLFDMEYRDCQPD 265
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y +L S + + ++S+M K L P+ + Y ++K L
Sbjct: 266 VTNYGVLMSACAACGDAGGIRGLISDMRKRKLTPDDASYNVLIKCL 311
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 8/156 (5%)
Query: 272 LIEMFSVLGLYEMAKYVI-----KKTERKVSYYNILIKEMCRRC-DFKGPRDLLVEMRQV 325
L++ G Y+ AK ++ + + V+ Y +L+ C C D G R L+ +MR+
Sbjct: 237 LMQGLCDAGRYDDAKKLLFDMEYRDCQPDVTNYGVLMSA-CAACGDAGGIRGLISDMRKR 295
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEM-LGRNCHPDAITYEIFIVYSCRVGKFDV 384
P +YN ++ LC G+ +A L EM L P A TY + + C FD+
Sbjct: 296 KLTPDDASYNVLIKCLCDAGKVDEAHRALVEMQLKDGTVPSAATYRVLLDGCCEARDFDL 355
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
FN M+ G P T ++G + E+A
Sbjct: 356 GLRVFNAMLASGHCPLALTFRRLVRGLGEDGKAEEA 391
>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
Length = 1014
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 15/160 (9%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+NILIK +C+ + DL+ ++ + G P ++Y+ ++ LCK G A EL EML
Sbjct: 760 FNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEML 819
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD + Y IFI + G+ D A + M++ G+QP T+ A + G + Y+
Sbjct: 820 YKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMLHYD 879
Query: 419 -----DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPV 453
+Y+ +S +Y L+ S H+K++ +
Sbjct: 880 FSCFRGTKQYIQIS----------VYELMDSTHNKSHRRI 909
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 2/148 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ LI +CR D +L EM + G T+ ++ CK+ + +A L ++M+
Sbjct: 446 YSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMI 505
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
N P+ +T+ + I C VG AF ++QMV+ GL+P T+ + I G +
Sbjct: 506 DSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVS 565
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLH 446
A ++V + Y +N +SL A L+
Sbjct: 566 KANEFVADLENSYAVLNN--FSLTALLY 591
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 51/112 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI ++C+ F L EM G EP +TY ++ LCK G DA L ++M
Sbjct: 341 YNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMR 400
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ Y I C+ G D A + MVK GL P A+++ I G
Sbjct: 401 DKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAG 452
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 80/180 (44%), Gaps = 36/180 (20%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN + D + +DL M Q I +++N ++ LCK G+ +A +L+ ++
Sbjct: 726 YNCFLDYFATEGDMEKAKDLHSAMLQGHLASI-VSFNILIKGLCKAGKIQEAIDLMRKIT 784
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD I+Y I C++G + AF +N+M+ +GL+P + Y IF R+
Sbjct: 785 ESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVA-------YNIFIRW- 836
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
++H +++ A + + M+++G++PN YR +L
Sbjct: 837 ------------------------CNVHGESDK---ALGIYTNMIRSGVQPNWDTYRALL 869
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 56/110 (50%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
+I E+ ++ + L ++ +G P YN ++ LCKN + DA L +EM GR
Sbjct: 309 MIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRG 368
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
P+ +TY I I C+ G + A F++M +G++ + + + I GY
Sbjct: 369 LEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGY 418
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 77/183 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ILI +C+R + L +MR G + YN ++ CK G A LL M+
Sbjct: 376 YAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMV 435
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P A +Y I CR G A +M +RG+ T A I G+ + +
Sbjct: 436 KEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMD 495
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + D + + ++++ + N A + +M++ GL+P+ YR ++
Sbjct: 496 EAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLI 555
Query: 479 KHL 481
L
Sbjct: 556 SGL 558
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 76/195 (38%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y I+ C + G R L+V M G + + YN ++ LCKN + +A E+ M+
Sbjct: 201 YTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMV 260
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
D +TY + CR+ + ++A + M++ G P A + I E
Sbjct: 261 NIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVE 320
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A+ D + Y+ L KN A + EM GL PN Y ++
Sbjct: 321 EAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILI 380
Query: 479 KHLHTSHQEHMAKCL 493
L A CL
Sbjct: 381 HALCKRGMIEDALCL 395
>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
Length = 690
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 69/154 (44%), Gaps = 5/154 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNILI CR+ +LL EM++VG P TYN +L CK G A ELL +M+
Sbjct: 391 YNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMI 450
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C P IT+ + C+VGK D A M + G+ P + I F+ R +
Sbjct: 451 DDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLID--FLCKRGD 508
Query: 419 DAYKYVVLSADKYKS---SSNMLYSLLASLHDKN 449
+ K KS + +LL L DKN
Sbjct: 509 VDLAIELFDEMKEKSVPANVTTFNALLKGLRDKN 542
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L EM + I+ V YN L+ C+ DF +LL +M GC+P +T+ ++
Sbjct: 411 LQEMKEVGIRP---DVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHG 467
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
CK G+ +A +L M HP+ + Y I + C+ G D+A F++M ++ +
Sbjct: 468 YCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPAN 527
Query: 401 LATHAAFIKG 410
+ T A +KG
Sbjct: 528 VTTFNALLKG 537
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M++ G + T YN ++ C+ + +A ELL+EM PD TY + SC+ G
Sbjct: 379 MKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGD 438
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
F +M+ G QP + T + GY + ++A + + + +N++Y+
Sbjct: 439 FAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNT 498
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
L K + +A + EM + + NV+ + +LK L + A
Sbjct: 499 LIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKA 547
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 77/192 (40%), Gaps = 6/192 (3%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEM--RQVGCEPITLTYNYVLGVLCKNGQDADACEL 353
V Y IL+ +C+ +L M + + P +T N V+ LCK+G+ +A
Sbjct: 172 VVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAF 231
Query: 354 LEEMLG--RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
+E+ + C P+ +TY I CRVG +A+ +M G+ + T + G
Sbjct: 232 VEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGL 291
Query: 412 FIFYRYEDAYKYVVLSADKYKSSSN--MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
R A ++ + + YS L NN MA + E M G P
Sbjct: 292 CRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSP 351
Query: 470 NVSVYRRVLKHL 481
+ +Y ++ L
Sbjct: 352 DAIMYFTMISGL 363
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C+R D +L EM++ T+N +L L A EL+++M
Sbjct: 496 YNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMR 555
Query: 359 GRNCHPDAITYEIFIVY 375
C PD +T ++ + +
Sbjct: 556 EERCFPDYVTVDVLMEW 572
>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
Length = 676
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 74/151 (49%)
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
+P TY ++G CK G+ A A LL M+ + P+ TY I CR G FD AF
Sbjct: 319 KPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFE 378
Query: 388 FFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHD 447
N+M G P + T+ A I G+ + + AYK + ++ + + Y++L + H
Sbjct: 379 LMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHC 438
Query: 448 KNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
K + A ++ ++M +N P++ Y ++
Sbjct: 439 KQGHITYALDLFNQMAENSCHPDIDTYTTII 469
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+GG C G A EM + + V + + Y LI CR F +L+
Sbjct: 329 IGGYC-KEGKLARAEML-------LGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELM 380
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
+M+ G P TYN ++G CK G+ A ++L + PD +TY + I C+
Sbjct: 381 NKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQ 440
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
G A + FNQM + P + T+ I Y
Sbjct: 441 GHITYALDLFNQMAENSCHPDIDTYTTIIAMY 472
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 82/180 (45%), Gaps = 1/180 (0%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
++++ CR+ F+ L M ++G P + Y + LCK G A +LEEM+G
Sbjct: 220 TVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVG 279
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK-RGLQPRLATHAAFIKGYFIFYRYE 418
+ P+ T+ I C++G + AF F ++VK +P + T+ I GY +
Sbjct: 280 KGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLA 339
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + ++ + + Y+ L H + + A ++++M G PN+ Y ++
Sbjct: 340 RAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAII 399
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 80/178 (44%), Gaps = 3/178 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ L+ C+ F+ LL M + G + T V+ C+ G+ D L M+
Sbjct: 184 FRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMV 243
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ + Y ++ C+ G AF+ +MV +GL+P + TH + I G E
Sbjct: 244 EMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTE 303
Query: 419 DAYKYV--VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
A++ ++ + YK + + Y+++ + K A+ +L M++ GL PN + Y
Sbjct: 304 RAFRLFLKLVKSSSYKPNVHT-YTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTY 360
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 71/166 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +LI E C++ DL +M + C P TY ++ + C+ Q + +L ++ L
Sbjct: 430 YTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCL 489
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P TY I CRVGK A F +MV+ G P T+ A I G R E
Sbjct: 490 SIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLE 549
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMK 464
+A DK+ ++ LA + + + +A + L + K
Sbjct: 550 EARALFETMLDKHMVPCDVTCVTLAYEYCRRDKTTIAVSFLDGLDK 595
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 70/166 (42%), Gaps = 4/166 (2%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGV-LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
D+L+E+R G + T N+VL V L + A A + + G PDA ++ ++
Sbjct: 134 DMLLELRSHGLPLVVETANWVLRVGLRQRHHFAHARQAFD---GMGVRPDARSFRALVLG 190
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
C+ G+F+ A M + G AT ++ + R+ D + +
Sbjct: 191 CCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVEMGNPPN 250
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ Y+ K A +VL EM+ GL+PNV + ++ L
Sbjct: 251 VVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGL 296
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 46/104 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ Y +I C++ + + L + +G P TY ++ C+ G+ A ++ E
Sbjct: 462 IDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFE 521
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
M+ C PD ITY I C+ + + A F M+ + + P
Sbjct: 522 RMVQHGCLPDPITYGALISGLCKESRLEEARALFETMLDKHMVP 565
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 5/108 (4%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +I CR + M Q GC P +TY ++ LCK + +A L E ML
Sbjct: 500 YTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLEEARALFETML 559
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAA 406
++ P +T CR K +A +F + GL R HAA
Sbjct: 560 DKHMVPCDVTCVTLAYEYCRRDKTTIAVSFLD-----GLDKRQQAHAA 602
>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
Length = 1003
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 15/160 (9%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+NILIK +C+ + DL+ ++ + G P ++Y+ ++ LCK G A EL EML
Sbjct: 760 FNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEML 819
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD + Y IFI + G+ D A + M++ G+QP T+ A + G + Y+
Sbjct: 820 YKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMLHYD 879
Query: 419 -----DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPV 453
+Y+ +S +Y L+ S H+K++ +
Sbjct: 880 FSCFRGTKQYIQIS----------VYELMDSTHNKSHRRI 909
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 2/148 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ LI +CR D +L EM + G T+ ++ CK+ + +A L ++M+
Sbjct: 446 YSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMI 505
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
N P+ +T+ + I C VG AF ++QMV+ GL+P T+ + I G +
Sbjct: 506 DSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVS 565
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLH 446
A ++V + Y +N +SL A L+
Sbjct: 566 KANEFVADLENSYAVLNN--FSLTALLY 591
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 51/112 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI ++C+ F L EM G EP +TY ++ LCK G DA L ++M
Sbjct: 341 YNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMR 400
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ Y I C+ G D A + MVK GL P A+++ I G
Sbjct: 401 DKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAG 452
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L ++ +G P YN ++ LCKN + DA L +EM GR P+ +TY I I C
Sbjct: 325 LACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALC 384
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
+ G + A F++M +G++ + + + I GY
Sbjct: 385 KRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGY 418
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 80/180 (44%), Gaps = 36/180 (20%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN + D + +DL M Q G +++N ++ LCK G+ +A +L+ ++
Sbjct: 726 YNCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMSKIT 784
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD I+Y I C++G + AF +N+M+ +GL+P + Y IF R+
Sbjct: 785 ESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVA-------YNIFIRW- 836
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
++H +++ A + + M+++G++PN YR +L
Sbjct: 837 ------------------------CNVHGESDK---ALGIYTNMIRSGVQPNWDTYRALL 869
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 76/195 (38%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y I+ C + G R L+V M G + + YN ++ LCKN + +A E+ M+
Sbjct: 201 YTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMV 260
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
D +TY + CR+ + ++A + M++ G P A + I E
Sbjct: 261 NIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVE 320
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A+ D + Y+ L KN A + EM GL PN Y ++
Sbjct: 321 EAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILI 380
Query: 479 KHLHTSHQEHMAKCL 493
L A CL
Sbjct: 381 HALCKRGMIEDALCL 395
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 76/183 (41%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ILI +C+R + L +MR G + YN ++ CK G A LL M+
Sbjct: 376 YAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMV 435
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P A +Y I CR G +M +RG+ T A I G+ + +
Sbjct: 436 KEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMD 495
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + D + + ++++ + N A + +M++ GL+P+ YR ++
Sbjct: 496 EAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLI 555
Query: 479 KHL 481
L
Sbjct: 556 SGL 558
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 7/180 (3%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
+Y +I + + + + +M G P T+T+ ++ LCK+G A L +EM
Sbjct: 655 FYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEM 714
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAF---IKGYFIF 414
L N P+ TY F+ Y G + A + + M LQ LA+ +F IKG
Sbjct: 715 LAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM----LQGHLASIVSFNILIKGLCKA 770
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ ++A + + S + YS + K + A + +EM+ GL+P+V Y
Sbjct: 771 GKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAY 830
>gi|242067062|ref|XP_002454820.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
gi|241934651|gb|EES07796.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
Length = 600
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 104/238 (43%), Gaps = 9/238 (3%)
Query: 245 LTKKGIWRVVEVLNQ-VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILI 303
+ K+GI N + G C V+ ++F+ EMA + T V+Y LI
Sbjct: 245 MDKEGIRADTVTWNSLIHGLCKYGRVKEAAQLFT-----EMA--AAQATPDNVTY-TTLI 296
Query: 304 KEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH 363
CR + + L EM G P TYN +L LC++G+ + +LL EM R
Sbjct: 297 DGYCRAGNIEEAVKLRGEMEATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEMDERKVQ 356
Query: 364 PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY 423
D +T I C+ G A +M++ GLQ T+ A I G+ ++A +
Sbjct: 357 ADHVTCNTLINAYCKRGHMTSACKVKKKMMESGLQLNQFTYKALIHGFCKAKELDEAKEA 416
Query: 424 VVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
D S + ++S L K NN + E+MK GL P+ +VYR +++ L
Sbjct: 417 FFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLLIPDELMKRGLPPDKAVYRSLIRRL 474
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 85/183 (46%), Gaps = 6/183 (3%)
Query: 299 YNILIKEMCR---RCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
YN +I C+ R + RD M + G T+T+N ++ LCK G+ +A +L
Sbjct: 222 YNTVIALYCKKGMRYEAMCVRD---RMDKEGIRADTVTWNSLIHGLCKYGRVKEAAQLFT 278
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM PD +TY I CR G + A +M G+ P +AT+ A ++
Sbjct: 279 EMAAAQATPDNVTYTTLIDGYCRAGNIEEAVKLRGEMEATGMLPGVATYNAILRKLCEDG 338
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ ++ + + ++ + ++ + L + + K + A V +MM++GL+ N Y+
Sbjct: 339 KMKEVNQLLNEMDERKVQADHVTCNTLINAYCKRGHMTSACKVKKKMMESGLQLNQFTYK 398
Query: 476 RVL 478
++
Sbjct: 399 ALI 401
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 65/177 (36%), Gaps = 37/177 (20%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL-EEM 357
Y LI C+ + ++ +M G P +++++ CK +ADA L+ +E+
Sbjct: 397 YKALIHGFCKAKELDEAKEAFFQMVDAGFSPNYSVFSWLVDGFCKK-NNADAVLLIPDEL 455
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
+ R PD Y I CR G D A F+QM +GL
Sbjct: 456 MKRGLPPDKAVYRSLIRRLCRKGLVDQAQKVFDQMQSKGL-------------------- 495
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+++Y+ LA + PV A N L M KN L +Y
Sbjct: 496 ---------------VGDSLVYATLAYTYLTEGKPVAASNTLDGMAKNQLYITPQIY 537
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 63/178 (35%), Gaps = 8/178 (4%)
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVLGLYEM---AKYVIKKTERK-----VSYYNILIK 304
+ V +Q+ L A + + L M A+ V + R YN ++
Sbjct: 133 ALRVFDQMRARGLAPDAHACTALLTALARARMTATARRVFDEMARAGLAVSTHVYNAMLH 192
Query: 305 EMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHP 364
+ D L+ M G +YN V+ + CK G +A + + M
Sbjct: 193 VCLKAGDAARAEALVTRMDAAGVPLDRFSYNTVIALYCKKGMRYEAMCVRDRMDKEGIRA 252
Query: 365 DAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
D +T+ I C+ G+ A F +M P T+ I GY E+A K
Sbjct: 253 DTVTWNSLIHGLCKYGRVKEAAQLFTEMAAAQATPDNVTYTTLIDGYCRAGNIEEAVK 310
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 7/224 (3%)
Query: 270 RALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEP 329
R + E F++ ++ + K + YN LI +C C++K LL EM P
Sbjct: 266 RQVTEAFNLF-----SEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMP 320
Query: 330 ITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFF 389
+ ++ V+ LCK G A A ++++ M+ R PD +TY + C + D A F
Sbjct: 321 NVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVF 380
Query: 390 NQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKN 449
+ MV +G P + ++ I GY R + A + + + + + Y+ L
Sbjct: 381 DTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHV 440
Query: 450 NNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
A + EM+ +G P++ YR +L +L +H H+A+ +
Sbjct: 441 GRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNH--HLAEAM 482
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 94/210 (44%), Gaps = 5/210 (2%)
Query: 269 VRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCE 328
+R L FSVL AK + + + +N LI+ +C L + G +
Sbjct: 160 LRRLGYAFSVL-----AKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQ 214
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P +TY ++ LCK G + A LL M+ +NC P+ I Y I C+ + AFN
Sbjct: 215 PDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNL 274
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
F++M+ +G+ P + T+ + I ++ + + + +++S + K
Sbjct: 275 FSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCK 334
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A +V+ M+K G+ P+V Y ++
Sbjct: 335 EGMIAIAHDVVDMMIKRGVEPDVVTYTALM 364
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 92/228 (40%), Gaps = 9/228 (3%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
G C V A I + + V K V YN +I +C+ +L E
Sbjct: 226 GLCKVGNTSAAIRLLRSM--------VQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSE 277
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M G P TYN ++ LC + LL EM+ P+ + + + C+ G
Sbjct: 278 MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGM 337
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
+A + + M+KRG++P + T+ A + G+ + ++A K K + Y++
Sbjct: 338 IAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNI 397
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL-HTSHQEH 488
L + + + A +L +M GL + Y ++ L H +H
Sbjct: 398 LINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQH 445
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 4/184 (2%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
NILI C +L ++ ++GC+P T+N ++ LC G+ +A L ++ +G
Sbjct: 151 NILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIG 210
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
PD +TY + C+VG A MV++ +P + + I + +
Sbjct: 211 EGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTE 270
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNN--NPVMAKNVLSEMMKNGLRPNVSVYRRV 477
A+ + S K S +++ + +H N +L+EM+ + + PNV V+ V
Sbjct: 271 AFN--LFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTV 328
Query: 478 LKHL 481
+ L
Sbjct: 329 VDAL 332
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 67/164 (40%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L +M G P T N ++ C + A +L ++L C PD T+ I C
Sbjct: 134 LSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLC 193
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
GK A + F++ + G QP + T+ + G A + + K + +
Sbjct: 194 VEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVI 253
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y+ + K+ A N+ SEM+ G+ P++ Y ++ L
Sbjct: 254 AYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHAL 297
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Query: 265 LVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQ 324
L++G + M +GL E + ++ YN LI +C + L EM
Sbjct: 398 LINGYCQIQRMDKAMGLLE--QMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVA 455
Query: 325 VGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
G P +TY +L LCKN A+A LL+ + G N D + Y I I CR G+ +
Sbjct: 456 SGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEA 515
Query: 385 AFNFFNQMVKRG 396
A + F+ + +G
Sbjct: 516 ARDLFSNLSCQG 527
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 61/158 (38%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P T+ + +L + K + L +M PD T I I C + + AF+
Sbjct: 110 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 169
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
+++K G QP T I+G + + +A + + + Y L + K
Sbjct: 170 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 229
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
N A +L M++ RPNV Y ++ L Q
Sbjct: 230 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQ 267
>gi|15222997|ref|NP_172253.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180186|sp|Q9LQQ1.1|PPR20_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g07740, mitochondrial; Flags: Precursor
gi|8439893|gb|AAF75079.1|AC007583_15 It contains PPR repeats PF|01535 [Arabidopsis thaliana]
gi|14596021|gb|AAK68738.1| Unknown protein [Arabidopsis thaliana]
gi|31376389|gb|AAP49521.1| At1g07730 [Arabidopsis thaliana]
gi|51970836|dbj|BAD44110.1| hypothetical protein [Arabidopsis thaliana]
gi|332190050|gb|AEE28171.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 459
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 87/180 (48%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+NILIK +CD++ + EM ++ +P +TYN ++G LC+N A LLE+M+
Sbjct: 189 FNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMI 248
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+A+T+ + + C G+++ A M RG +P L + + R +
Sbjct: 249 KKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRID 308
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + + ++Y++L + A VL+EM G +PN + YR ++
Sbjct: 309 EAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMI 368
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 14/148 (9%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ +L+K +C + ++ + L+ +M GC+P + Y ++ L K G+ +A LL EM
Sbjct: 259 FGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMK 318
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R PD + Y I + + C + A+ +M +G +P AT+ I G F R E
Sbjct: 319 KRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDG---FCRIE 375
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLH 446
D + S N+L ++LAS H
Sbjct: 376 D-----------FDSGLNVLNAMLASRH 392
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y IL+ ++ +R + LL EM++ +P + YN ++ LC + +A +L EM
Sbjct: 294 YGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQ 353
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ C P+A TY + I CR+ FD N N M+ P AT + G
Sbjct: 354 MKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAG 405
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 76/204 (37%), Gaps = 22/204 (10%)
Query: 207 RLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVL--------- 257
R DD + LL D ++ N FG L K L KG + + L
Sbjct: 233 RNDDMGKAKSLLEDMIKKRIRPNAVTFGLL-----MKGLCCKGEYNEAKKLMFDMEYRGC 287
Query: 258 --NQVGGSCLVS--GVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFK 313
V L+S G R I+ +L L EM K IK V YNIL+ +C C
Sbjct: 288 KPGLVNYGILMSDLGKRGRIDEAKLL-LGEMKKRRIKPD---VVIYNILVNHLCTECRVP 343
Query: 314 GPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFI 373
+L EM+ GC+P TY ++ C+ +L ML P T+ +
Sbjct: 344 EAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMV 403
Query: 374 VYSCRVGKFDVAFNFFNQMVKRGL 397
+ G D A M K+ L
Sbjct: 404 AGLIKGGNLDHACFVLEVMGKKNL 427
>gi|410109911|gb|AFV61035.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
alba]
Length = 413
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 87/183 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ +L EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 194 VYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 253
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G + A ++M +GL+P T+ I G
Sbjct: 254 QMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEG 313
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ A+++ + ++ Y+ + S + PV A+ +L EM+ GL+P+ Y
Sbjct: 314 DLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREMLSVGLKPDTGTYT 373
Query: 476 RVL 478
++
Sbjct: 374 MII 376
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 81/188 (43%), Gaps = 14/188 (7%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ C+ D + + + + + G P ++YN ++ + G + L M
Sbjct: 126 FFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAM 185
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
L PD TY + I C+ K D A F++M+ +GL P T I G+ R
Sbjct: 186 LASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR- 244
Query: 418 EDAYKYVVLSADKYKS--SSNML-----YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
V L+ + YK S ++L Y+ L K + A ++ EM GL+P+
Sbjct: 245 ------VDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPD 298
Query: 471 VSVYRRVL 478
Y ++
Sbjct: 299 KFTYTTLI 306
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 45/112 (40%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI C+ D + M Q + Y ++ LC+ G+ DA ++L EML
Sbjct: 302 YTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREML 361
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
PD TY + I C+ G +M + G P + T+ + G
Sbjct: 362 SVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVXTYNVLMNG 413
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 63/148 (42%)
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
+N ++ CK+G A + + + P ++Y + R+G D F + M+
Sbjct: 127 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 186
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPV 453
G+QP + T++ I G + +DA + K + + ++ L H KN
Sbjct: 187 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 246
Query: 454 MAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+A + +M+ L P++ Y ++ L
Sbjct: 247 LAMEIYKQMLSQSLLPDLITYNTLIYGL 274
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 84/186 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI CR+ + +L+ M G +P TYN ++ LCK G+ A +L+
Sbjct: 393 VVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLD 452
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EML PD TY I +V CR A F++M +G+ P L + +A I
Sbjct: 453 EMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNG 512
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ A KY + + N++Y++L +N A V EM++ G +V Y
Sbjct: 513 CLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYN 572
Query: 476 RVLKHL 481
+L L
Sbjct: 573 TILNGL 578
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 72/172 (41%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ILI C L EM + G E +T N ++ C+ G A E L ML
Sbjct: 676 YGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNML 735
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD ITY I + D AF N+M GL P + T+ + G+ R +
Sbjct: 736 LKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQ 795
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
+A ++ ++ + Y+ L + H NN A V EM++ G P+
Sbjct: 796 EAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 847
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 78/183 (42%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN ++ +C+ +L EM + G P T+ ++ K+G A L E
Sbjct: 568 VVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFE 627
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+ RN PD +TY I C+ + + +N M+ R + P ++ I GY
Sbjct: 628 MMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMG 687
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+A++ +K ++ + + + + + N V A LS M+ G+ P+ Y
Sbjct: 688 CVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYN 747
Query: 476 RVL 478
++
Sbjct: 748 TLI 750
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M+ G P + Y ++G C+NG ++A ++ +EML + C D +TY + C+
Sbjct: 523 DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEK 582
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
A F +M +RG+ P T I GY
Sbjct: 583 MLSEADELFTEMTERGVFPDFYTFTTLINGY 613
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 60/137 (43%)
Query: 286 KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNG 345
+ V K E + N ++K CR + + L M G P +TYN ++ K
Sbjct: 698 EMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEE 757
Query: 346 QDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
A L+ +M PD ITY + + R G+ A +M++RG+ P +T+
Sbjct: 758 NMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYT 817
Query: 406 AFIKGYFIFYRYEDAYK 422
+ I G+ ++A++
Sbjct: 818 SLINGHVTQNNLKEAFR 834
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 93/185 (50%), Gaps = 4/185 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDL--LVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
+NI+I C C F+ L L +M ++G EP +T ++ C+ + +DA L+++
Sbjct: 123 FNIVINCFC--CCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
M+ PD + Y I C+ + + AF+FF ++ ++G++P + T+ A + G R
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
+ DA + + K + + + YS L KN + AK + EM++ + P++ Y
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300
Query: 477 VLKHL 481
++ L
Sbjct: 301 LVNGL 305
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 87/197 (44%), Gaps = 5/197 (2%)
Query: 290 KKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKN 344
K+ ERK V Y L+ +C + LL +M + P +TY+ +L KN
Sbjct: 214 KEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKN 273
Query: 345 GQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
G+ +A EL EEM+ + PD +TY + C + D A F+ MV +G + ++
Sbjct: 274 GKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSY 333
Query: 405 AAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMK 464
I G+ R ED K + + S+ + Y+ L + + A+ S+M
Sbjct: 334 NTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF 393
Query: 465 NGLRPNVSVYRRVLKHL 481
G+ P++ Y +L L
Sbjct: 394 FGISPDIWTYNILLGGL 410
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 55/112 (49%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI+ + D ++ +M G P TYN +LG LC NG+ A + E+M
Sbjct: 368 YNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQ 427
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
R D +TY I C+ GK + A++ F + +GL+P + T+ + G
Sbjct: 428 KREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSG 479
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 84/193 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I +C+ D E+ + G P +TY ++ LC + + +DA LL +M+
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 252
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+ ITY + + GK A F +MV+ + P + T+++ + G + R +
Sbjct: 253 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRID 312
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + L K + + Y+ L + K + EM + GL N Y ++
Sbjct: 313 EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 372
Query: 479 KHLHTSHQEHMAK 491
+ + A+
Sbjct: 373 QGFFQAGDVDKAQ 385
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 65/176 (36%), Gaps = 36/176 (20%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M +G T+N V+ C Q + A +L +ML PD +T + CR
Sbjct: 110 KMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRN 169
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+ A + ++MV+ G +P + + A I R DA+ +
Sbjct: 170 RVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDF----------------- 212
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL-HTSHQEHMAKCLSS 495
E+ + G+RPNV Y ++ L ++S A+ LS
Sbjct: 213 ------------------FKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSD 250
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 1/209 (0%)
Query: 283 EMAKYV-IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
++A+ V +K V +NILI +C+ D + L EM+ GC P +TYN ++ L
Sbjct: 381 DLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNL 440
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
C G+ A +LL+EM C +TY I C+ + + A F+QM +G+
Sbjct: 441 CSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNA 500
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
T I G R +DA + + + +N+ Y+ + + + K + A ++L
Sbjct: 501 ITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQT 560
Query: 462 MMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
M NG +V Y ++ L + + +A
Sbjct: 561 MTANGFEVDVVTYGTLINGLCKAGRTQVA 589
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 5/206 (2%)
Query: 280 GLYEMAKYVIKK-TER----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
G E AK ++ + ER ++ +N LI +C + DL ++ G P T+
Sbjct: 339 GQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTF 398
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N ++ LCK G A L EEM C PD +TY I C +GK A + +M
Sbjct: 399 NILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMES 458
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM 454
G T+ I G R E+A + + S + + ++ L K+
Sbjct: 459 AGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDD 518
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVLKH 480
A ++S+M+ GL+PN Y +L H
Sbjct: 519 ANQLISQMISEGLQPNNITYNSILTH 544
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 80/182 (43%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N+LI C+ + + + G EP +TYN + LC+NG A ++++ M+
Sbjct: 259 NVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQ 318
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
PD TY I + C+ G+ + A NQMV+RG P + T I R E+
Sbjct: 319 EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEE 378
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
A K S +++L + K +P +A + EM +G P+ Y ++
Sbjct: 379 ALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLID 438
Query: 480 HL 481
+L
Sbjct: 439 NL 440
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 95/224 (42%), Gaps = 3/224 (1%)
Query: 283 EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLC 342
EM + IK V +N L+K +CR + +L EM G P T+ ++
Sbjct: 175 EMGERGIKP---DVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFV 231
Query: 343 KNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLA 402
+ G A + ML C P +T + I C++G+ + A + Q + G +P
Sbjct: 232 EEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQI 291
Query: 403 THAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM 462
T+ F+ G A K + + + Y+++ + KN AK +L++M
Sbjct: 292 TYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 351
Query: 463 MKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
++ G P+++ + ++ L + ++ A L+ + + L V
Sbjct: 352 VERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDV 395
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 77/193 (39%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ + K + EM + G +P +T+N ++ LC+ Q A +LEEM
Sbjct: 153 YNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMS 212
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD T+ + G A +M++ G P T I GY R E
Sbjct: 213 SSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVE 272
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA Y+ + Y+ + +N + A V+ M++ G P+V Y V+
Sbjct: 273 DALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVV 332
Query: 479 KHLHTSHQEHMAK 491
L + Q AK
Sbjct: 333 NCLCKNGQLEEAK 345
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 75/194 (38%), Gaps = 1/194 (0%)
Query: 289 IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
++ R +N LI +C+ L+ +M G +P +TYN +L CK G
Sbjct: 493 LQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIK 552
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
A ++L+ M D +TY I C+ G+ VA M +G++ + I
Sbjct: 553 KAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVI 612
Query: 409 KGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL-ASLHDKNNNPVMAKNVLSEMMKNGL 467
+ F DA + + Y ++ L + A + L EM+ G
Sbjct: 613 QSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGF 672
Query: 468 RPNVSVYRRVLKHL 481
P S +R + + L
Sbjct: 673 IPEFSSFRMLAEGL 686
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 1/221 (0%)
Query: 258 NQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRD 317
+Q+ V G+ + + S L L + I + V Y+ +I +C+ +
Sbjct: 216 DQITYGTFVDGMCKMGDTVSALNLLRKMEE-ISHIKPNVVIYSAIIDGLCKDGRHSDSHN 274
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L +EM+ G P +TYN ++G C +G+ + A LL+EML R P+ +TY I
Sbjct: 275 LFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFV 334
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ GKF A +++M+ RG+ P T+ + I G+ R + A L A K S
Sbjct: 335 KEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVF 394
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
++ L + +L EM + GL N Y ++
Sbjct: 395 TFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLI 435
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 68/161 (42%)
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G EP LTYN ++ L G+ +A EL EEM R PD ITY I C+ + D A
Sbjct: 504 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
F M + P + T I GY R +D + + + ++Y L
Sbjct: 564 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 623
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
K N A ++ EM+ +G+ P+ R +L + +
Sbjct: 624 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEE 664
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 1/153 (0%)
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
C P LT+ ++ LC+ G+ +A LL+ M+ PD ITY F+ C++G A
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237
Query: 387 NFFNQMVK-RGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
N +M + ++P + ++A I G R+ D++ + DK + + Y+ +
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ A+ +L EM++ + PNV Y ++
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNVVTYNALI 330
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 102/246 (41%), Gaps = 15/246 (6%)
Query: 236 LPVLISS-KALTKKGIW-RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTE 293
LP +S+ LTK G+ VV + G CL V +++F +
Sbjct: 132 LPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI------------CR 179
Query: 294 RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACEL 353
V + L+ +CR LL M + G +P +TY + +CK G A L
Sbjct: 180 PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNL 239
Query: 354 LEEMLG-RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
L +M + P+ + Y I C+ G+ + N F +M +G+ P + T+ I G+
Sbjct: 240 LRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFC 299
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
I R+ A + + ++ S + + Y+ L + K A + EM+ G+ PN
Sbjct: 300 ISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTI 359
Query: 473 VYRRVL 478
Y ++
Sbjct: 360 TYNSMI 365
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 17/172 (9%)
Query: 245 LTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKT-ERKVS----YY 299
+ KGI+ N V +C++ G F + G + A+ ++++ ERK+S Y
Sbjct: 279 MQDKGIFP-----NIVTYNCMIGG-------FCISGRWSAAQRLLQEMLERKISPNVVTY 326
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N LI + F +L EM G P T+TYN ++ CK + A ++ M
Sbjct: 327 NALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMAT 386
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
+ C PD T+ I C + D ++M +RGL T+ I G+
Sbjct: 387 KGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGF 438
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 3/153 (1%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEM---AKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDL 318
G C ++ +EMF + +M A + E V YNILI + F +L
Sbjct: 472 GLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEEL 531
Query: 319 LVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCR 378
EM G P T+TY+ ++ LCK + +A ++ M ++ P+ +T+ I C+
Sbjct: 532 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCK 591
Query: 379 VGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
G+ D F +M +RG+ + I G+
Sbjct: 592 AGRVDDGLELFCEMGRRGIVADAIIYITLIYGF 624
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 128/331 (38%), Gaps = 28/331 (8%)
Query: 172 SEKVSALCFLKYMREIMPEFYKNSDICSLVIDNC---GRLDDYETMRQLLNDFNVYQ--V 226
+ VSAL L+ M EI N I S +ID GR D + + D ++ V
Sbjct: 231 GDTVSALNLLRKMEEI-SHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIV 289
Query: 227 CLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLG-LYEMA 285
N GF IS + + R+++ + + S V ALI F G +E A
Sbjct: 290 TYNCMIGGFC---ISGRWSAAQ---RLLQEMLERKISPNVVTYNALINAFVKEGKFFEAA 343
Query: 286 KYVIKKTERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+ + R + YN +I C++ D+ M GC P T+ ++
Sbjct: 344 ELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGY 403
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
C + D ELL EM R + +TY I C VG + A + QM+ G+ P +
Sbjct: 404 CGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDI 463
Query: 402 ATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSN----------MLYSLLASLHDKNN 450
T + G + +DA + + + K ++ + Y++L
Sbjct: 464 VTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEG 523
Query: 451 NPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ A+ + EM G+ P+ Y ++ L
Sbjct: 524 KFLEAEELYEEMPHRGIVPDTITYSSMIDGL 554
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 5/132 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ +I +C++ + V M P +T+N ++ CK G+ D EL EM
Sbjct: 547 YSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMG 606
Query: 359 GRNCHPDAITYEIFIVYSCR-VGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
R DAI Y I ++Y R VG + A + F +M+ G+ P T + G F+
Sbjct: 607 RRGIVADAIIY-ITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG---FWSK 662
Query: 418 EDAYKYVVLSAD 429
E+ + V + D
Sbjct: 663 EELERAVAMLED 674
>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
Length = 820
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 78/173 (45%), Gaps = 4/173 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI+ +CRR D + + L M + G P T+N ++ C+ Q A +L +M
Sbjct: 132 YNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMP 191
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R DA++Y I C G+ D A F +M QP + THAA +KG R E
Sbjct: 192 FRGFSQDAVSYAALIEGFCEAGRIDEALELFREMT----QPDMYTHAALVKGLCDAGRGE 247
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
+ + + + Y+ L L + A+ +L+EM +GL P V
Sbjct: 248 EGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCV 300
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 86/220 (39%), Gaps = 35/220 (15%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNY------------- 336
K E V YN +++ C LL +MR+ G EP +TYN
Sbjct: 329 KGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGS 388
Query: 337 ----------------------VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIV 374
++ LCK G+ +AC L + + R P+++T+ I
Sbjct: 389 AFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVIN 448
Query: 375 YSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSS 434
C+ GKFDVA F M+ G P T++ FI+ ++ ++ K
Sbjct: 449 GLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKP 508
Query: 435 SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
S + Y+++ + N +A + +M+ G P+V Y
Sbjct: 509 STVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTY 548
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 3/201 (1%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L +M + + T R Y L+ CR + +L EM G P +T V+
Sbjct: 253 LQKMKELGWRPTTRA---YAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNA 309
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
C+ G+ + A + E M + C P+ TY + C GK A +QM + G++P
Sbjct: 310 YCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPD 369
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
+ T+ I+G I A++ + L ++ Y++L K A ++
Sbjct: 370 VVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFD 429
Query: 461 EMMKNGLRPNVSVYRRVLKHL 481
+ G+RPN + V+ L
Sbjct: 430 GLEYRGIRPNSVTFNTVINGL 450
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 69/142 (48%), Gaps = 1/142 (0%)
Query: 271 ALIEMFSVLGLYEMAKYVIKK-TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEP 329
ALIE F G + A + ++ T+ + + L+K +C + +L +M+++G P
Sbjct: 204 ALIEGFCEAGRIDEALELFREMTQPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRP 263
Query: 330 ITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFF 389
T Y ++ + C+ + +A ++L EM P +T I + CR G+ A F
Sbjct: 264 TTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVF 323
Query: 390 NQMVKRGLQPRLATHAAFIKGY 411
M +G +P + T+ A ++G+
Sbjct: 324 ESMRFKGCEPNVWTYNAIVQGF 345
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 85/211 (40%), Gaps = 3/211 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N +I +C+ F L M G P T TY+ + LCK + ++EML
Sbjct: 443 FNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEML 502
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
++ P + Y I I + +A + QMV +G P + T+ ++ Y R +
Sbjct: 503 QKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLD 562
Query: 419 DAYKYVVLSADKYKSSSN-MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN-VSVYRR 476
+A + VV K ++ + M Y+ L H A +L M PN + +
Sbjct: 563 EA-ENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFIL 621
Query: 477 VLKHLHTSHQEHMAKCLSSRYSSLSLGSSVE 507
+ L EH+ +S + ++ L E
Sbjct: 622 LRHLLQRRLAEHVPLKATSVWKTIELADVFE 652
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 2/218 (0%)
Query: 257 LNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPR 316
++QV + L++G+ + E S L L M + + T V YN +I +C+
Sbjct: 113 MDQVSYATLLNGLCKIGETRSALKLLRMIED--RSTRPNVVMYNTIIDGLCKDKLVNEAY 170
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
DL EM G P +TY+ ++ C GQ +A LL EM+ +N +P+ TY I +
Sbjct: 171 DLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDAL 230
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
C+ GK A N M K G++P + ++ + GY + ++A + K + +
Sbjct: 231 CKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNV 290
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
Y+++ K+ A N+L E++ + PN Y
Sbjct: 291 YSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTY 328
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 111/251 (44%), Gaps = 9/251 (3%)
Query: 244 ALTKKGIW-RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNIL 302
+TK+G+ VV + G CL+ V+ +MF + V K V YNI+
Sbjct: 245 VMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTM--------VQKGVNPNVYSYNIM 296
Query: 303 IKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNC 362
I +C+ +LL E+ P T+TY+ ++ CK G+ A +LL+EM R
Sbjct: 297 IDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQ 356
Query: 363 HPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
D +TY + C+ D A F +M +RG+QP T+ A I G R+++A K
Sbjct: 357 PADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQK 416
Query: 423 YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLH 482
K + Y+++ S K A + S+M +NG P+ + +++ L
Sbjct: 417 LFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLF 476
Query: 483 TSHQEHMAKCL 493
Q A+ L
Sbjct: 477 EKDQNDKAEKL 487
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 100/220 (45%), Gaps = 8/220 (3%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
G CL L+E F +L + ++K V Y IL+ +C+ K ++LL
Sbjct: 194 GFCLAG---QLMEAFGLLN-----EMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAV 245
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M + G +P ++YN ++ C G+ +A ++ M+ + +P+ +Y I I C+ +
Sbjct: 246 MTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKR 305
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
D A N +++ + + P T+++ I G+ R A + + + + + Y+
Sbjct: 306 VDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTS 365
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
L KN N A + +M + G++PN Y ++ L
Sbjct: 366 LLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGL 405
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 93/225 (41%), Gaps = 35/225 (15%)
Query: 289 IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLT--------------- 333
+K E + NILI C +L ++ ++G +P T+T
Sbjct: 38 VKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVK 97
Query: 334 --------------------YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFI 373
Y +L LCK G+ A +LL + R+ P+ + Y I
Sbjct: 98 KSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTII 157
Query: 374 VYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKS 433
C+ + A++ +++M RG+ P + T++ I G+ + + +A+ + K +
Sbjct: 158 DGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNIN 217
Query: 434 SSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ Y++L K AKN+L+ M K G++PNV Y ++
Sbjct: 218 PNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLM 262
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 78/180 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N ++ + + + L +M+ G EP T N ++ C GQ + +L ++L
Sbjct: 13 FNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKIL 72
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ IT + C G+ + +F +++V +G Q ++A + G
Sbjct: 73 KLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETR 132
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A K + + D+ + ++Y+ + K+ A ++ SEM G+ PNV Y ++
Sbjct: 133 SALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLI 192
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 45/99 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI +C+ K + L + GC TYN ++ LCK G +A + +M
Sbjct: 398 YTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKME 457
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
C PDA+T+EI I + D A ++M+ + L
Sbjct: 458 ENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDL 496
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 37/82 (45%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P + +N ++G L K A L ++M + PD T I I C +G+ +F
Sbjct: 8 PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67
Query: 389 FNQMVKRGLQPRLATHAAFIKG 410
+++K G QP T +KG
Sbjct: 68 LGKILKLGYQPNTITLNTLMKG 89
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 104/251 (41%), Gaps = 29/251 (11%)
Query: 234 GFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVL---GLYEMAKYVIK 290
GF P ++ L K G+W + +G+ +++F + GL+ AK
Sbjct: 72 GFEPDAVTVTTLVK-GVW-------------MENGIPDAVQLFDEMTEKGLFGDAKT--- 114
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
Y ILI +C+ G L E + C+ TY ++ LCK+G +A
Sbjct: 115 --------YGILINGLCK-ARKTGLAIKLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEA 165
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
++ EM+G PD + Y + CR G+ A FF +M RG+ + T+ + I G
Sbjct: 166 LDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHG 225
Query: 411 YFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
+++ ++ L D+ S +++L K A+ +L M G P+
Sbjct: 226 LSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPD 285
Query: 471 VSVYRRVLKHL 481
+ Y ++ L
Sbjct: 286 ILTYNTLMNGL 296
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 84/198 (42%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ L+ +CR K + EM G TYN ++ L + G + L
Sbjct: 181 VVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLN 240
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+ R PDA T+ I I C+ GK A M +G +P + T+ + G +
Sbjct: 241 LMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVG 300
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ EDA K AD+ + Y++L + + K+ A + EM GL+P+ Y
Sbjct: 301 QLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYN 360
Query: 476 RVLKHLHTSHQEHMAKCL 493
++ L S + A+ L
Sbjct: 361 TLIGALCQSGRVRTAQKL 378
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 82/192 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C+ + + L VEM+ G TY +L LCKNG +A +L + +
Sbjct: 359 YNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIK 418
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ + I + CR GK + A+ F+++ K GL+P + I G
Sbjct: 419 KTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLS 478
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A K + +K ++ ++++ K N A +L EM P+ +V +L
Sbjct: 479 EAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538
Query: 479 KHLHTSHQEHMA 490
Q H A
Sbjct: 539 CLASFDPQWHAA 550
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 80/186 (43%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI + R +K L M G P T+ ++ LCK G+ +A ++LE
Sbjct: 216 VYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILE 275
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M + PD +TY + C VG+ + A F + RG++ + ++ I GY
Sbjct: 276 LMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQ 335
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ ++A++ K S + Y+ L ++ A+ + EM G +S Y
Sbjct: 336 KIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYC 395
Query: 476 RVLKHL 481
+L L
Sbjct: 396 VLLDGL 401
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 79/193 (40%), Gaps = 2/193 (1%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K E + YN L+ +C + L + G + +YN ++ CK+ + +
Sbjct: 280 KGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDE 339
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A L EEM + P +TY I C+ G+ A F +M G +L+T+ +
Sbjct: 340 AFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLD 399
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNM-LYSLLASLHDKNNNPVMAKNVLSEMMKNGLR 468
G E+A + S K + N+ ++S+L + A E+ KNGL
Sbjct: 400 GLCKNGHLEEAID-LFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLE 458
Query: 469 PNVSVYRRVLKHL 481
P+ Y ++ L
Sbjct: 459 PDTIAYNILINGL 471
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 51/115 (44%)
Query: 295 KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
K+S Y +L+ +C+ + DL +++ +P ++ +L +C+ G+ +A +
Sbjct: 390 KLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQF 449
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
+E+ PD I Y I I C G A QM ++G P T I+
Sbjct: 450 DEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQ 504
>gi|359488082|ref|XP_002266772.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g08610-like [Vitis vinifera]
Length = 498
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 85/207 (41%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YNILI +C+ + +M C P +TYN +L LCK G +A LL
Sbjct: 284 VVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEALHLLH 343
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ C P ITY I I + G + A + +M++RG P TH G F
Sbjct: 344 SLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAPDDITHRTLFWGLFRLD 403
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
EDA + + + N + + K +A VL M+ + +PN +Y
Sbjct: 404 LVEDALVILKEMNKRNQRIKNSAFRFVIHGLCKKKKVDIAIQVLEMMVSSQCKPNEEIYS 463
Query: 476 RVLKHLHTSHQEHMAKCLSSRYSSLSL 502
++K + + A L + + L +
Sbjct: 464 AIIKGVGAAGMIEEANQLHQKLTELKV 490
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 108/253 (42%), Gaps = 15/253 (5%)
Query: 230 EKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVI 289
E+A L +++ S GI ++ VGG C ++ IE+ + L I
Sbjct: 91 ERATRVLKIMVMSG-----GIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAI 145
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
YN +++ M F + + GC +TY ++ ++CK+
Sbjct: 146 T--------YNTILRCMFDHGGFDQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQ 197
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF-DVAFNFFNQMVKRGLQPRLATHAAFI 408
A E+LE+M C+PD +TY + Y+C+ GK+ D A +N ++ G+ P T+ +
Sbjct: 198 AMEVLEDMAIEGCYPDIVTYNSLVNYTCKQGKYEDTALIIYN-LLSHGMGPNTVTYNTLL 256
Query: 409 KGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLR 468
+++ + +++ + + + Y++L + K A N +M+ +
Sbjct: 257 HSLCTHGYWDEVDEILLIMNTTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCL 316
Query: 469 PNVSVYRRVLKHL 481
P++ Y +L L
Sbjct: 317 PDIITYNTLLAAL 329
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 79/183 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ C++ ++ ++ + G P T+TYN +L LC +G + E+L M
Sbjct: 217 YNSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMN 276
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P +TY I I C+ G D A NFF+QMV P + T+ + +
Sbjct: 277 TTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVD 336
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + D S + Y+++ K A + EM++ G P+ +R +
Sbjct: 337 EALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAPDDITHRTLF 396
Query: 479 KHL 481
L
Sbjct: 397 WGL 399
>gi|410109877|gb|AFV61018.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
lycioides]
Length = 397
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 86/183 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ ++ EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 195 VYTYSVLINGLCKESKMDDANEMFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 254
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G A + ++M +GL+P T+ I G
Sbjct: 255 QMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEG 314
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A+++ + ++ Y+ L S + + A+ VL EM+ GL+P+ Y
Sbjct: 315 DLETAFEHRKRMIQEXIRLDDVAYTALISGLCQEERYLDAEKVLREMLSVGLKPDTGTYT 374
Query: 476 RVL 478
++
Sbjct: 375 MII 377
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 55/115 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +N L+ R D L M G +P TY+ ++ LCK + DA E+ +
Sbjct: 160 VVSFNTLMNGYIRLGDMDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANEMFD 219
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
EML + P+ +T+ I C+ G+ D+A + QM+ + L P L T+ I G
Sbjct: 220 EMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLXPDLITYNTLIYG 274
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 75/181 (41%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ C+ D + + + + G P +++N ++ + G + L M
Sbjct: 127 FFNILMHRFCKEGDIMVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDMDEGFRLKNAM 186
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
PD TY + I C+ K D A F++M+ +GL P T I G+ R
Sbjct: 187 HASGVQPDVYTYSVLINGLCKESKMDDANEMFDEMLDKGLVPNGVTFTTLIDGHCKNGRV 246
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ A + + + Y+ L K + A +++ EM GL+P+ Y +
Sbjct: 247 DLAMEIYKQMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTL 306
Query: 478 L 478
+
Sbjct: 307 I 307
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 1/221 (0%)
Query: 258 NQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRD 317
+Q+ V G+ + + S L L + I + V Y+ +I +C+ +
Sbjct: 216 DQITYGTFVDGMCKMGDTVSALNLLRKMEE-ISHIKPNVVIYSAIIDGLCKDGRHSDSHN 274
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L +EM+ G P +TYN ++G C +G+ + A LL+EML R P+ +TY I
Sbjct: 275 LFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFV 334
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ GKF A +++M+ RG+ P T+ + I G+ R + A L A K S
Sbjct: 335 KEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVF 394
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
++ L + +L EM + GL N Y ++
Sbjct: 395 TFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLI 435
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 68/161 (42%)
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G EP LTYN ++ L G+ +A EL EEM R PD ITY I C+ + D A
Sbjct: 504 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
F M + P + T I GY R +D + + + ++Y L
Sbjct: 564 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 623
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
K N A ++ EM+ +G+ P+ R +L + +
Sbjct: 624 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEE 664
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 1/153 (0%)
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
C P LT+ ++ LC+ G+ +A LL+ M+ PD ITY F+ C++G A
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237
Query: 387 NFFNQMVK-RGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
N +M + ++P + ++A I G R+ D++ + DK + + Y+ +
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ A+ +L EM++ + PNV Y ++
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNVVTYNALI 330
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 102/246 (41%), Gaps = 15/246 (6%)
Query: 236 LPVLISS-KALTKKGIW-RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTE 293
LP +S+ LTK G+ VV + G CL V +++F +
Sbjct: 132 LPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI------------CR 179
Query: 294 RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACEL 353
V + L+ +CR LL M + G +P +TY + +CK G A L
Sbjct: 180 PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNL 239
Query: 354 LEEMLG-RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
L +M + P+ + Y I C+ G+ + N F +M +G+ P + T+ I G+
Sbjct: 240 LRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFC 299
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
I R+ A + + ++ S + + Y+ L + K A + EM+ G+ PN
Sbjct: 300 ISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTI 359
Query: 473 VYRRVL 478
Y ++
Sbjct: 360 TYNSMI 365
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 17/172 (9%)
Query: 245 LTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKT-ERKVS----YY 299
+ KGI+ N V +C++ G F + G + A+ ++++ ERK+S Y
Sbjct: 279 MQDKGIFP-----NIVTYNCMIGG-------FCISGRWSAAQRLLQEMLERKISPNVVTY 326
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N LI + F +L EM G P T+TYN ++ CK + A ++ M
Sbjct: 327 NALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMAT 386
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
+ C PD T+ I C + D ++M +RGL T+ I G+
Sbjct: 387 KGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGF 438
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 3/153 (1%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEM---AKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDL 318
G C ++ +EMF + +M A + E V YNILI + F +L
Sbjct: 472 GLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEEL 531
Query: 319 LVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCR 378
EM G P T+TY+ ++ LCK + +A ++ M ++ P+ +T+ I C+
Sbjct: 532 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCK 591
Query: 379 VGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
G+ D F +M +RG+ + I G+
Sbjct: 592 AGRVDDGLELFCEMGRRGIVADAIIYITLIYGF 624
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 128/331 (38%), Gaps = 28/331 (8%)
Query: 172 SEKVSALCFLKYMREIMPEFYKNSDICSLVIDNC---GRLDDYETMRQLLNDFNVYQ--V 226
+ VSAL L+ M EI N I S +ID GR D + + D ++ V
Sbjct: 231 GDTVSALNLLRKMEEI-SHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIV 289
Query: 227 CLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLG-LYEMA 285
N GF IS + + R+++ + + S V ALI F G +E A
Sbjct: 290 TYNCMIGGFC---ISGRWSAAQ---RLLQEMLERKISPNVVTYNALINAFVKEGKFFEAA 343
Query: 286 KYVIKKTERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+ + R + YN +I C++ D+ M GC P T+ ++
Sbjct: 344 ELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGY 403
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
C + D ELL EM R + +TY I C VG + A + QM+ G+ P +
Sbjct: 404 CGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDI 463
Query: 402 ATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSN----------MLYSLLASLHDKNN 450
T + G + +DA + + + K ++ + Y++L
Sbjct: 464 VTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEG 523
Query: 451 NPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ A+ + EM G+ P+ Y ++ L
Sbjct: 524 KFLEAEELYEEMPHRGIVPDTITYSSMIDGL 554
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 5/132 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ +I +C++ + V M P +T+N ++ CK G+ D EL EM
Sbjct: 547 YSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMG 606
Query: 359 GRNCHPDAITYEIFIVYSCR-VGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
R DAI Y I ++Y R VG + A + F +M+ G+ P T + G F+
Sbjct: 607 RRGIVADAIIY-ITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG---FWSK 662
Query: 418 EDAYKYVVLSAD 429
E+ + V + D
Sbjct: 663 EELERAVAMLED 674
>gi|225432738|ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial [Vitis vinifera]
Length = 535
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 80/176 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +++ CR DF+ +L EM + GC P +TY V+ L K + + A E+ E+M
Sbjct: 295 YTSIVEAYCREKDFRKVNSVLNEMEEKGCPPNVVTYTIVMHALGKGKEISKALEVYEKMK 354
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
G +C PD Y I + G+ A + F M K+G P + T+ I + + E
Sbjct: 355 GSSCVPDTSFYSSLIYILSKAGRLKDARDVFEDMTKQGAIPDVLTYNTMISAACMHSQEE 414
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
DA K ++ + YS L + +NN + +L+ M KN + V Y
Sbjct: 415 DALKLLLKMEESSCKPDLNTYSPLLKMCCRNNRMKVLSALLNHMFKNDISLEVGTY 470
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 13/193 (6%)
Query: 231 KAFGFLPVLISSKALTK-----KGIWRVVEVLNQVG-GSCLVSGVRALIEMFSVLGLYEM 284
K GF P +IS ++ + K +V VLN++ C + V I M ++ E+
Sbjct: 284 KEHGFCPDVISYTSIVEAYCREKDFRKVNSVLNEMEEKGCPPNVVTYTIVMHALGKGKEI 343
Query: 285 AKYVIKKTERK-------VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYV 337
+K + + K S+Y+ LI + + K RD+ +M + G P LTYN +
Sbjct: 344 SKALEVYEKMKGSSCVPDTSFYSSLIYILSKAGRLKDARDVFEDMTKQGAIPDVLTYNTM 403
Query: 338 LGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
+ C + Q+ DA +LL +M +C PD TY + CR + V N M K +
Sbjct: 404 ISAACMHSQEEDALKLLLKMEESSCKPDLNTYSPLLKMCCRNNRMKVLSALLNHMFKNDI 463
Query: 398 QPRLATHAAFIKG 410
+ T++ + G
Sbjct: 464 SLEVGTYSLLVHG 476
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 8/165 (4%)
Query: 248 KGIWRVVEVLNQVGGSCLVSGVR---ALIEMFSVLGLYEMAKYVIKKTERK-----VSYY 299
K I + +EV ++ GS V +LI + S G + A+ V + ++ V Y
Sbjct: 341 KEISKALEVYEKMKGSSCVPDTSFYSSLIYILSKAGRLKDARDVFEDMTKQGAIPDVLTY 400
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N +I C + LL++M + C+P TY+ +L + C+N + LL M
Sbjct: 401 NTMISAACMHSQEEDALKLLLKMEESSCKPDLNTYSPLLKMCCRNNRMKVLSALLNHMFK 460
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
+ + TY + + C+ GK + A FF +MV +GL P+ TH
Sbjct: 461 NDISLEVGTYSLLVHGLCKSGKLEHACLFFEEMVSKGLVPKDCTH 505
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 77/386 (19%), Positives = 151/386 (39%), Gaps = 67/386 (17%)
Query: 132 QVSEIIELLRSGDSETESKLLSMSVSLSNASVIEILRVLNSEKVSALCFLKYMREIMPEF 191
++SE+++ S L VS+S + V ++L+ +++ + A F K+ +
Sbjct: 91 KISELLKFRHSSADAVVQALGGCGVSVSESLVEQVLKRFSNDWIPAFGFFKWAK--AQTG 148
Query: 192 YKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIW 251
Y++S ++ Y +M +L + + +W
Sbjct: 149 YRHS------------MNSYNSMVDILGKLKKFDL-----------------------MW 173
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEM 306
+VE ++++GG ++ + ++ + ++ A + ER N L+ +
Sbjct: 174 ELVEEMDRLGGYVSLATMTKVMRRLARASRWKDAIEAFRGMERFGVKKDTLAMNTLMDAL 233
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITL---TYNYVLGVLCKNGQDADACELLEEMLGRNCH 363
+ + D+ VE + + I L T+N ++ CK + +A + + EM
Sbjct: 234 VKENSVEHANDVFVEFK----DSILLNPHTFNVLIHGWCKARKMDNALKSMAEMKEHGFC 289
Query: 364 PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA----AFIKGYFIFYRYED 419
PD I+Y + CR F + N+M ++G P + T+ A KG I E
Sbjct: 290 PDVISYTSIVEAYCREKDFRKVNSVLNEMEEKGCPPNVVTYTIVMHALGKGKEISKALE- 348
Query: 420 AYKYVVLSADKYKSSS----NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
Y +K K SS YS L + K A++V +M K G P+V Y
Sbjct: 349 VY-------EKMKGSSCVPDTSFYSSLIYILSKAGRLKDARDVFEDMTKQGAIPDVLTYN 401
Query: 476 RVLKH--LHTSHQEHMAKCLSSRYSS 499
++ +H+ ++ + L SS
Sbjct: 402 TMISAACMHSQEEDALKLLLKMEESS 427
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 88/188 (46%), Gaps = 2/188 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ LI +CR + LL EM GC P +TYN ++ L G+ +A LLE
Sbjct: 101 VVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLE 160
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM--VKRGLQPRLATHAAFIKGYFI 413
+M C P+ IT+ + I C+ G+ + AF ++M ++ GL P + T + + G
Sbjct: 161 QMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCK 220
Query: 414 FYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
R DA+ + ++ + + YS L K A +L++M++ G R N
Sbjct: 221 EQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVT 280
Query: 474 YRRVLKHL 481
Y V+ L
Sbjct: 281 YSTVVDGL 288
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 5/204 (2%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMR-QVGCEPITLTYNYVLG 339
L+E A+ K V YN +I +C+ + L +M G P +TY+ ++
Sbjct: 52 LFEEAR--AKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLID 109
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
LC++ + C+LLEEM GR C P+A+TY + G+ AF+ QM G P
Sbjct: 110 GLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPP 169
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYV--VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKN 457
L T IKG E A++ V + + S + ++ + K + A N
Sbjct: 170 ELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHN 229
Query: 458 VLSEMMKNGLRPNVSVYRRVLKHL 481
V ++ G RPNV Y ++ L
Sbjct: 230 VFKRALERGCRPNVVTYSTLIDGL 253
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 124/291 (42%), Gaps = 38/291 (13%)
Query: 205 CGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEV------LN 258
CGR+++ T L +D ++ FGF P +++ L G+ R EV L
Sbjct: 78 CGRIENALT---LYDDMAIH--------FGFRPTVVTYSTLID-GLCRDHEVDKGCKLLE 125
Query: 259 QVGG-SCLVSGV------RALI------EMFSVLGLYEMAKYVIKKTERKVSYYNILIKE 305
++ G C + V AL+ E FS+L +MA ++ + ++IK
Sbjct: 126 EMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLL--EQMAA---NGCPPELITFGLIIKG 180
Query: 306 MCRRCDFKGPRDLLVEMRQV--GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH 363
+C+ + + ++ EM + G P +T+N VL LCK + DA + + L R C
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240
Query: 364 PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY 423
P+ +TY I ++ K D A +MV+ G + T++ + G R EDA
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVV 300
Query: 424 VVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ D + Y+ L K A +L EM++ G P+V Y
Sbjct: 301 LRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTY 351
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 3/218 (1%)
Query: 258 NQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRD 317
N V S L+ G+ + +M L L +AK V Y+ ++ + + +
Sbjct: 242 NVVTYSTLIDGLSKMAKMDEALQL--LAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVV 299
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
+L +MR GC P +TYN ++ K + +A LL EML HP +TY C
Sbjct: 300 VLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLC 359
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV-LSADKYKSSSN 436
R G+FD A + M RG P T+++ + G R +A Y ++ D+ +
Sbjct: 360 RSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHV 419
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ YS L K A L M++ G P+V +
Sbjct: 420 IAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTF 457
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 73/166 (43%), Gaps = 3/166 (1%)
Query: 258 NQVGGSCLVSGVRALIEMFSVLGLYE-MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPR 316
N + S +V G+ + LG +E MA+ + V Y+ LI +C+
Sbjct: 382 NAITYSSIVDGLCKAGRVTEALGYFEKMARDEV--VAPHVIAYSALIDGLCKAGKIDEAY 439
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
+ L M + G P +T++ ++ LC G+ EL M R C PD +TY +
Sbjct: 440 EFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRL 499
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
CR + D AF+ F QM GL P +T I G R EDA +
Sbjct: 500 CRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKR 545
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 70/154 (45%), Gaps = 1/154 (0%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P +TY ++ L K + +A +L EE + CHP +TY I C+ G+ + A
Sbjct: 28 PDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTL 87
Query: 389 FNQM-VKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHD 447
++ M + G +P + T++ I G + + K + A + + + + Y+ L +
Sbjct: 88 YDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALL 147
Query: 448 KNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A ++L +M NG P + + ++K L
Sbjct: 148 GQGRSKEAFSLLEQMAANGCPPELITFGLIIKGL 181
>gi|125539409|gb|EAY85804.1| hypothetical protein OsI_07165 [Oryza sativa Indica Group]
Length = 649
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 77/153 (50%), Gaps = 3/153 (1%)
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
R + C+P +YN VL LC+ + DA EL+ EM+G++C P+ +T+ I I C+ G
Sbjct: 488 RSMPCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLV 547
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
D A QM G P + T+ A I G+ R +DA K +LS K + S L
Sbjct: 548 DRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALK--LLSTMSCKPDAISYNSTL 605
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
L + A+ +++EM++N PN ++
Sbjct: 606 KGLC-RAERWQDAEELVAEMLRNKCTPNEVTFK 637
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 100/232 (43%), Gaps = 8/232 (3%)
Query: 252 RVVEVLNQV---GGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSY--YNILIKEM 306
R V++L+Q+ G + V LI FS G + A ++ K + YN +K +
Sbjct: 243 RAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCKPNTVCYNAALKGL 302
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
C ++ +L+ EM + GC P T++ ++ LC+N A E+LE+M C PD
Sbjct: 303 CIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDT 362
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
+ Y I I G+ D A N MV +P A +KG+ R+ DA + +
Sbjct: 363 VNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQ 419
Query: 427 SADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
M +++L +N A V +M + P++ Y +L
Sbjct: 420 MFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLL 471
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 5/157 (3%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK--VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCE 328
+L+ FS GL E+A + + K + YN ++K +CR ++ +L+ EM C
Sbjct: 469 SLLNGFSEQGLVEVAIQLFRSMPCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCP 528
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P +T+N ++ LC+ G A E+LE+M PD TY I G+ D A
Sbjct: 529 PNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKL 588
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV 425
+ M +P ++ + +KG R++DA + V
Sbjct: 589 LSTM---SCKPDAISYNSTLKGLCRAERWQDAEELVA 622
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 3/180 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N ++K CR + +L+ +M + C I +T+N ++ LC+NG A ++ E+M
Sbjct: 397 FNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMP 456
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C PD +TY + G +VA F M +P + ++ A +KG R+E
Sbjct: 457 RYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSM---PCKPDIFSYNAVLKGLCRAARWE 513
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA + + K + + +++L + + A VL +M G P++ Y ++
Sbjct: 514 DAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALI 573
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 3/183 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++K +C ++ +L+ EM + C P +T+ + C+NG A +LL++M
Sbjct: 193 YNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMP 252
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C PD + Y I G D A + N M+ +P + A +KG I R+E
Sbjct: 253 RYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNAALKGLCIAERWE 309
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
D + + K S + +S+L S +NN A VL +M K G P+ Y ++
Sbjct: 310 DIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIII 369
Query: 479 KHL 481
L
Sbjct: 370 NSL 372
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 6/131 (4%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L +M KY E YNI+I + R D L + + C+P L +N VL
Sbjct: 350 LEQMEKY---GCEPDTVNYNIIINSLSERGRVD---DALRLLNSMVCKPDALGFNAVLKG 403
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
C+ + DA EL+ +M +C +T+ I I C+ G + A F QM + P
Sbjct: 404 FCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPD 463
Query: 401 LATHAAFIKGY 411
+ T+++ + G+
Sbjct: 464 IVTYSSLLNGF 474
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 63/155 (40%), Gaps = 8/155 (5%)
Query: 273 IEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGC 327
I F GL + A ++ + R V Y+ LI + DLL M C
Sbjct: 232 IRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---C 288
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
+P T+ YN L LC + D EL+ EM+ + C P+ T+ + I C+ D A
Sbjct: 289 KPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVE 348
Query: 388 FFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
QM K G +P + I R +DA +
Sbjct: 349 VLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALR 383
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 57/137 (41%), Gaps = 12/137 (8%)
Query: 243 KALTKKGIWRVVEVL--NQVGGSCLVSGV--RALIEMFSVLGLYEMAKYVIKK-----TE 293
K L + W L VG C + V LI GL + A V+++ +
Sbjct: 504 KGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGST 563
Query: 294 RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACEL 353
+ YN LI + LL M C+P ++YN L LC+ + DA EL
Sbjct: 564 PDIFTYNALINGFSEQGRLDDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEEL 620
Query: 354 LEEMLGRNCHPDAITYE 370
+ EML C P+ +T++
Sbjct: 621 VAEMLRNKCTPNEVTFK 637
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 91/222 (40%), Gaps = 8/222 (3%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI E +R L M++ CEP TY ++ CK G+ A
Sbjct: 442 VVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFY 501
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EML P+ TY I C+ GK DVA + F +M + G + T+ A I G
Sbjct: 502 EMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGN 561
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R+ +A K+ ++ + + Y+ L + KN +A + EM K PN Y
Sbjct: 562 RFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYT 621
Query: 476 RVLKHLHTSHQEHMAKCLSSR--------YSSLSLGSSVEAR 509
++ L + A+ L+ YS+L G E R
Sbjct: 622 SLIYGLCQEGKVDAAERLTENGCEPTIDTYSTLVSGLCREGR 663
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 79/183 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI CR ++ M + GC P ++TY+ ++ LC G+ +A ++LEEM
Sbjct: 235 YTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMT 294
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P TY + I C +G+ D A N M K+G P + T+ A I G F + E
Sbjct: 295 EKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKME 354
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + + + Y+ L + +A + M +G N Y +++
Sbjct: 355 LAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQII 414
Query: 479 KHL 481
K L
Sbjct: 415 KGL 417
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 87/192 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +IK + D + + +M + G P +TYN ++ K G +A L M
Sbjct: 410 YNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMK 469
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
NC PD TY I C+ GK D A +FF +M+K G+ P T+ A I GY + +
Sbjct: 470 ESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKID 529
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + S+S Y+ + S K N A+ ++M + GL+PN Y ++
Sbjct: 530 VALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLI 589
Query: 479 KHLHTSHQEHMA 490
L + ++A
Sbjct: 590 NGLCKNTATNLA 601
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 98/213 (46%), Gaps = 9/213 (4%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
A+I+ + G ++A + ++ E + YN +I + + F +M +
Sbjct: 517 AMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQ 576
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G +P T+TY ++ LCKN A ++ EM +NC P+A TY I C+ GK D A
Sbjct: 577 GLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAA 636
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
++ + G +P + T++ + G R +A + V +K S S +Y L
Sbjct: 637 ----ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVA 692
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
H K+ A + + M G +P++ +Y+ ++
Sbjct: 693 HCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLI 725
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 92/193 (47%), Gaps = 2/193 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N L+ ++ + +++ ++ G +P LT+N ++ +LCK G+ +A + ++
Sbjct: 165 FNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIF 224
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PDA TY I+ CR K D AF F++MVK G P T++ I G R
Sbjct: 225 QFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIG 284
Query: 419 DAYKYVVLSADKYKSSSNMLYSL-LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+A + +K + Y++ ++SL D A N++ M K G P+V Y +
Sbjct: 285 EAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDD-AINLVRSMGKKGCSPSVQTYTAI 343
Query: 478 LKHLHTSHQEHMA 490
+ L + + +A
Sbjct: 344 ISGLFRAGKMELA 356
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 86/192 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N +I +C++ + + ++ Q P TY ++ C+N + A E+ + M+
Sbjct: 200 FNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMV 259
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C+P+++TY I C G+ A + +M ++G++P + T+ I R +
Sbjct: 260 KDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVD 319
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA V K S S Y+ + S + +A + +M+K GL PN Y ++
Sbjct: 320 DAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALI 379
Query: 479 KHLHTSHQEHMA 490
L T + +A
Sbjct: 380 NELCTEGRFGIA 391
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 85/206 (41%), Gaps = 4/206 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI +C+ +G D + + GCEP TY+ ++ LC+ G+ +A +L+E M
Sbjct: 620 YTSLIYGLCQ----EGKVDAAERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMK 675
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P Y +V C+ K D A FN M +G QP L + I R E
Sbjct: 676 EKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAE 735
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A K +S +++++L + + + L M P++ Y +
Sbjct: 736 EALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILA 795
Query: 479 KHLHTSHQEHMAKCLSSRYSSLSLGS 504
+ L + + +R +SL S
Sbjct: 796 RELSKVGKSIGTDQIGNRLREVSLPS 821
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 53/131 (40%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K E V Y + I +C +L+ M + GC P TY ++ L + G+
Sbjct: 296 KGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMEL 355
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A + +ML P+ +TY I C G+F +A F+ M G T+ IK
Sbjct: 356 AIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIK 415
Query: 410 GYFIFYRYEDA 420
G F E A
Sbjct: 416 GLFGMDDIEKA 426
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 86/218 (39%), Gaps = 10/218 (4%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y +I + R + + +M + G P T+TYN ++ LC G+ A ++ +
Sbjct: 337 VQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFD 396
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI-----KG 410
M G +A TY I + + A FN+M+K G P + T+ I +G
Sbjct: 397 WMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRG 456
Query: 411 YFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
Y +A +++ + + Y L S K A + EM+K G+ PN
Sbjct: 457 YL-----NNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPN 511
Query: 471 VSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSVEA 508
Y ++ + +A L R +S+E
Sbjct: 512 QWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIET 549
>gi|357495705|ref|XP_003618141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355493156|gb|AES74359.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 846
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 85/175 (48%), Gaps = 10/175 (5%)
Query: 244 ALTKKGI---WRVVE---VLNQVGGSCLVSGVRALIEMFSVLGLYE-MAKYVIKKTERKV 296
+ +KG+ W+ VE V N V +CL++G+ + + +YE M + I R
Sbjct: 207 GMVEKGLETFWKNVEGSFVPNVVACNCLLNGLSKINYIGECWEVYEEMGRLGI---HRNG 263
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
+NI+ +CR D L +M + G EP +TYN ++ CK + DA L +
Sbjct: 264 YTFNIMTHVLCREGDSDKVNGFLEKMEEEGFEPDLVTYNILINGYCKKRRLEDAFYLYKI 323
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
M R P+ I+Y + C+ GK A FNQMV+RG+ P + ++ I GY
Sbjct: 324 MGIRGVVPNLISYSALMNGLCKEGKIKEAHQLFNQMVQRGIDPDVVSYNTLISGY 378
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 72/175 (41%), Gaps = 1/175 (0%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P + N +L L K + E+ EEM H + T+ I CR G D F
Sbjct: 226 PNVVACNCLLNGLSKINYIGECWEVYEEMGRLGIHRNGYTFNIMTHVLCREGDSDKVNGF 285
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
+M + G +P L T+ I GY R EDA+ + + + + YS L + K
Sbjct: 286 LEKMEEEGFEPDLVTYNILINGYCKKRRLEDAFYLYKIMGIRGVVPNLISYSALMNGLCK 345
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLG 503
A + ++M++ G+ P+V Y ++ + M C S + + +G
Sbjct: 346 EGKIKEAHQLFNQMVQRGIDPDVVSYNTLISG-YCKEGGKMQMCRSLLHEMIGIG 399
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 82/201 (40%), Gaps = 4/201 (1%)
Query: 283 EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG-CEPITLTYNYVLGVL 341
E+ ++ IK E + Y+ L+ +C+ R L+ + Q G P TY + L
Sbjct: 429 ELQRFGIKIPE---NLYDYLLVALCKEGRPFAARSFLIRISQDGDYVPEMSTYIKLAESL 485
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
C +A L EM ++ + TY+ I CRV + A N +MV G+ P L
Sbjct: 486 CSFNNVEEALILKSEMAKKSMKLNLTTYKAIISCLCRVKRTSEAENLLEEMVSLGILPDL 545
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
A I GY + A + A +++ Y+ + + + N + +
Sbjct: 546 EIKRALINGYCEENDVDKAVSLLKFFAKEFQVYDTESYNAIVKVFCEVGNVAELMELQDK 605
Query: 462 MMKNGLRPNVSVYRRVLKHLH 482
++K G PN + V++ L
Sbjct: 606 LVKIGYVPNSLTCKYVIRGLQ 626
>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 689
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 91/188 (48%), Gaps = 2/188 (1%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N LI + R L+ M + GC P ++YN ++ LC+ G+ +A ++EML
Sbjct: 468 NALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLE 527
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
PD TY I + CR K ++A ++Q ++ GL+P + H I G + +D
Sbjct: 528 NGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDD 587
Query: 420 AYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A V+ + + ++N++ Y+ L + K + A + M K GL+P++ Y +L
Sbjct: 588 AMT-VMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTIL 646
Query: 479 KHLHTSHQ 486
K L H+
Sbjct: 647 KGLCLCHR 654
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 7/184 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+LIK C++ +F+ R L M + G +P +Y+ V+ L K G+ DA EL +EM
Sbjct: 152 YNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMS 211
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR-GLQPRLATHAAFIKGYFIFYRY 417
R PD Y I I + +A ++++++ + P + TH I G R
Sbjct: 212 ERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRV 271
Query: 418 EDAYKYVVLSADKYKSSSNMLY---SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+D K + K LY SL+ L D+ N A++V +E+++ +V Y
Sbjct: 272 DDCLK--IWDRMKQNEREKDLYTYSSLIHGLCDEGNVD-KAESVFNELVERKAFIDVVTY 328
Query: 475 RRVL 478
+L
Sbjct: 329 NTML 332
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 61/125 (48%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+IL+ +CR + +L + Q G EP + +N ++ LC G+ DA ++ M
Sbjct: 537 YSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANME 596
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
RNC + +TY + +V + A + M K GLQP + ++ +KG + +R
Sbjct: 597 HRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVS 656
Query: 419 DAYKY 423
A ++
Sbjct: 657 YAIEF 661
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 71/160 (44%), Gaps = 2/160 (1%)
Query: 317 DLLVEMRQV-GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
D+ MR++ GCEP +YN +L + Q L P+ TY + I
Sbjct: 99 DVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKM 158
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
SC+ +F+ A F N M K G +P + +++ I + +DA + +++ +
Sbjct: 159 SCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPD 218
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKN-GLRPNVSVY 474
Y++L K + MA + +++++ + PNV +
Sbjct: 219 VTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTH 258
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 113/294 (38%), Gaps = 28/294 (9%)
Query: 202 IDNCGRLDD----YETMRQLLNDFNVYQ-------VCLN---EKAFGFLPVLISSKALTK 247
+ CGR+DD ++ M+Q + ++Y +C +KA L+ KA
Sbjct: 265 LSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFID 324
Query: 248 KGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMC 307
VV +GG C ++ +E++ ++ ++ + YNILIK +
Sbjct: 325 -----VVTYNTMLGGFCRCGKIKESLELWRIME---------QRNSVNIVSYNILIKGLL 370
Query: 308 RRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAI 367
+ M G TY + LC NG A +++E+ + H D
Sbjct: 371 ENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVY 430
Query: 368 TYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLS 427
Y I C+ + + A N +M K G++ A I G R DA +
Sbjct: 431 AYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGM 490
Query: 428 ADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + Y++L + A + EM++NGL+P++ Y +L L
Sbjct: 491 GKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGL 544
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 67/177 (37%), Gaps = 6/177 (3%)
Query: 242 SKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKT------ERK 295
S+A + R+VE++ C ++I+ + + + A V K+ E
Sbjct: 54 SEARMVTHVGRIVELIRSQECKCDEDVALSVIKTYGKNSMPDRALDVFKRMREIFGCEPG 113
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ YN L+ + L G P TYN ++ + CK + A L
Sbjct: 114 IRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLN 173
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
M PD +Y I + GK D A F++M +R + P + + I G+
Sbjct: 174 WMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFL 230
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 14/183 (7%)
Query: 230 EKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVI 289
EKA GFL + K K ++ V+N + + + +E+F EM++
Sbjct: 166 EKARGFLNWMW--KEGFKPDVFSYSTVINDLAKT---GKLDDALELFD-----EMSE--- 212
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM-RQVGCEPITLTYNYVLGVLCKNGQDA 348
++ V+ YNILI + D K L ++ P T+N ++ L K G+
Sbjct: 213 RRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVD 272
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
D ++ + M D TY I C G D A + FN++V+R + T+ +
Sbjct: 273 DCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTML 332
Query: 409 KGY 411
G+
Sbjct: 333 GGF 335
>gi|255606928|ref|XP_002538650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223511145|gb|EEF23733.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 248
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 8/186 (4%)
Query: 250 IWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIK 304
IW+ V L V S A+I F +G+ +AK + + + YN+ +
Sbjct: 3 IWKRVNELGFVPDSITYG---AMIRGFCRMGMLNVAKGLFTRMRALGLSLALYDYNMFLA 59
Query: 305 EMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHP 364
+C+ + R L E+R+ C +++N ++ K G A ELL++ML +P
Sbjct: 60 SLCKESSLEQARKLFQELRKSNCGLDVISFNTMIDGTLKAGDIQSAKELLKDMLQMGLNP 119
Query: 365 DAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV 424
DA TY I I +G D A FN+M+ G P + + + +KG+ + + E+ +
Sbjct: 120 DAFTYSILINRFSILGLMDEAKAAFNRMIGSGFIPSIHVYDSLLKGFSLMDKAEETINLL 179
Query: 425 VLSADK 430
L ADK
Sbjct: 180 QLMADK 185
>gi|224077524|ref|XP_002305285.1| predicted protein [Populus trichocarpa]
gi|222848249|gb|EEE85796.1| predicted protein [Populus trichocarpa]
Length = 523
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 157/378 (41%), Gaps = 20/378 (5%)
Query: 117 ISSFAMVNGPYATPKQVSEIIELL---RSGDSETESKLLSMSVSLSNASVIEILRVLNSE 173
+S+ +N P V+EI +L R+ + E+ L + S +S V ++L+ +
Sbjct: 32 LSTLTPLNQIPPLPGLVNEISRILSDQRNPHHDLETSLNAFSSEISTNLVEQVLKRCKNL 91
Query: 174 KVSALCFLKYMREIMPEFYKNSDICSLVIDNCGRLDDYETMRQLL------NDFNVYQVC 227
SA F + + I P F + + ++++ G + + L +DF + Q
Sbjct: 92 GFSAHRFFLWAKRI-PGFEHSEESYHILVNILGTSRQFAILWDFLIEMRESHDFEINQEI 150
Query: 228 LNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMF----SVLGLYE 283
+ +L S+A R + + + G V + L+ + V +
Sbjct: 151 I------WLVFRSYSRANLPSDAIRAFDRMAEFGLRPSVDDLDKLLYVLCKCKHVKCAQQ 204
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
V K E K Y+IL++ + R + EMR GC L YN +L LCK
Sbjct: 205 FFDRVKHKFEAKAKTYSILVRGWGDIGEAVEARKVFDEMRGRGCALDVLAYNSLLEALCK 264
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
G +A ++ E+ PDA +Y IFI C F+ ++M + L P + T
Sbjct: 265 GGNVDEAYKMFREIGSHGVEPDACSYAIFIRAYCEANNIHSVFSVLDRMKRYDLVPNVFT 324
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
+ IK + EDAY+ + ++ S Y+ + + H +++ A ++S M+
Sbjct: 325 YNCIIKKLCKNGKVEDAYQLLHEMMERGVSPDAWSYNTILAYHCEHSEVNRATKLISIMV 384
Query: 464 KNGLRPNVSVYRRVLKHL 481
K+ P+ Y +LK L
Sbjct: 385 KDNCLPDRHSYNMLLKLL 402
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 60/112 (53%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +IK++C+ + LL EM + G P +YN +L C++ + A +L+ M+
Sbjct: 325 YNCIIKKLCKNGKVEDAYQLLHEMMERGVSPDAWSYNTILAYHCEHSEVNRATKLISIMV 384
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
NC PD +Y + + RVG+FD A + M +RG P ++T++ I G
Sbjct: 385 KDNCLPDRHSYNMLLKLLVRVGRFDRATEIWESMGERGFYPSVSTYSVMIHG 436
>gi|125573832|gb|EAZ15116.1| hypothetical protein OsJ_30529 [Oryza sativa Japonica Group]
Length = 906
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 83/182 (45%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N++I MC LL ++ GCEP LTYN V+ LC+ + DA L+ M
Sbjct: 379 NLMIIAMCSEGRLDVSYYLLGKLVAYGCEPSVLTYNIVIKCLCEQNRMDDARALITIMQS 438
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
R PD T I + C++G+ + A + F +M K G++P +A + + I R ++
Sbjct: 439 RGVRPDMSTNSIMVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRRLKE 498
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
A + + + ++Y+ L + + + EM+K GL+P Y ++
Sbjct: 499 AEATLRQMIREGLAPDEIIYTSLINGYSLTRQTRNVCRIFDEMLKRGLQPGPHAYGSLIN 558
Query: 480 HL 481
L
Sbjct: 559 GL 560
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 76/193 (39%)
Query: 282 YEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
Y + K V E V YNI+IK +C + R L+ M+ G P T + ++
Sbjct: 396 YLLGKLVAYGCEPSVLTYNIVIKCLCEQNRMDDARALITIMQSRGVRPDMSTNSIMVTAY 455
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
CK G+ A L EM P Y+ IV CR+ + A QM++ GL P
Sbjct: 456 CKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRRLKEAEATLRQMIREGLAPDE 515
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
+ + I GY + + + + + Y L + K N A L
Sbjct: 516 IIYTSLINGYSLTRQTRNVCRIFDEMLKRGLQPGPHAYGSLINGLVKGNKIRKALGYLER 575
Query: 462 MMKNGLRPNVSVY 474
M++ G+ P +Y
Sbjct: 576 MLEEGIAPQTVIY 588
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 62/130 (47%)
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
+A LL+E++ N P I + I+ C G+ DV++ ++V G +P + T+ I
Sbjct: 358 EADHLLDEIVTSNVLPVNIVLNLMIIAMCSEGRLDVSYYLLGKLVAYGCEPSVLTYNIVI 417
Query: 409 KGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLR 468
K R +DA + + + S++ + + K A ++ EM K+G+
Sbjct: 418 KCLCEQNRMDDARALITIMQSRGVRPDMSTNSIMVTAYCKIGEIESALHLFGEMAKDGIE 477
Query: 469 PNVSVYRRVL 478
P+++VY ++
Sbjct: 478 PSIAVYDSII 487
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 99/264 (37%), Gaps = 48/264 (18%)
Query: 263 SCLVSGVRALIEMFSVLGLY-EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
S +V+ + E+ S L L+ EMAK I E ++ Y+ +I +CR K L +
Sbjct: 449 SIMVTAYCKIGEIESALHLFGEMAKDGI---EPSIAVYDSIIVCLCRMRRLKEAEATLRQ 505
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M + G P + Y ++ Q + C + +EML R P Y I + K
Sbjct: 506 MIREGLAPDEIIYTSLINGYSLTRQTRNVCRIFDEMLKRGLQPGPHAYGSLINGLVKGNK 565
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLS-------------- 427
A + +M++ G+ P+ + I +F VVL
Sbjct: 566 IRKALGYLERMLEEGIAPQTVIYTMLINQFFRKGDVRLGLDLVVLMMKTNVAPDLITYGA 625
Query: 428 ------------------ADKYKSSSNMLYSLLASLHDKNNNP------------VMAKN 457
A K K + ML+ +L + D N +A+
Sbjct: 626 LVTGICRNIARRGMRPSLAKKLKEARYMLFRMLPQIIDTRNGKQKDNQICTEEMIQVAQG 685
Query: 458 VLSEMMKNGLRPNVSVYRRVLKHL 481
++ ++ +NG+ P++ +Y ++ L
Sbjct: 686 IIQDLEENGMVPDLHIYNGMINGL 709
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 80/198 (40%), Gaps = 5/198 (2%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L+ M +I K I +EM + + ++ ++ + G P YN ++
Sbjct: 654 LFRMLPQIIDTRNGKQKDNQICTEEM-----IQVAQGIIQDLEENGMVPDLHIYNGMING 708
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
LC+ + DA LL M P+ +TY I + R+G + A FN + G
Sbjct: 709 LCRANKMDDAYSLLSVMDQTGILPNHVTYTILMNNQIRLGDINHAIQLFNSLNSDGCVFD 768
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
T+ FIKG + R ++A ++++ + S Y L L N + +
Sbjct: 769 KITYNTFIKGLSLAGRMKEALSFLLMMHKRGFVPSKASYDKLMELLLAENAIDIVLQLFE 828
Query: 461 EMMKNGLRPNVSVYRRVL 478
+M+ G P + Y +L
Sbjct: 829 DMLFQGYTPRYANYTSLL 846
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 27/136 (19%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITL---TYNYVLGVLCKNGQDADACELLEEML 358
LI+ CR + D+ M+ G E + L Y ++ L ++G+ ++ EM+
Sbjct: 193 LIRVFCREGRLEPALDVFRRMK--GDEHVQLDAYAYTTMIWGLFEHGRVDHGLQMYHEMI 250
Query: 359 GRNCHPDAITYEIFIVYSCRV------------GKFDVAFNFFNQMVKRGLQPRLATHAA 406
R PDA TY + I + C+ GK A N F++M++ GL P H
Sbjct: 251 DRGIQPDAATYNVMIRWYCKSKWVGAAMDIYKDGKLGEAENLFDKMLESGLFP---DHVM 307
Query: 407 FI-------KGYFIFY 415
FI KG+ + +
Sbjct: 308 FISIARFFPKGWVVLF 323
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 55/132 (41%), Gaps = 24/132 (18%)
Query: 340 VLCKNGQDADACELLEEMLG-RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
V C+ G+ A ++ M G + DA Y I G+ D +++M+ RG+Q
Sbjct: 196 VFCREGRLEPALDVFRRMKGDEHVQLDAYAYTTMIWGLFEHGRVDHGLQMYHEMIDRGIQ 255
Query: 399 PRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNV 458
P AT+ I+ Y K+V + D Y K+ A+N+
Sbjct: 256 PDAATYNVMIRWYC-------KSKWVGAAMDIY----------------KDGKLGEAENL 292
Query: 459 LSEMMKNGLRPN 470
+M+++GL P+
Sbjct: 293 FDKMLESGLFPD 304
>gi|410109943|gb|AFV61051.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rotundifolia]
Length = 425
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 87/183 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ +L EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G A + ++M +GL+P T+ I G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEG 325
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ A+++ + ++ Y+ L S + V A+ +L EM+ GL+P++ Y
Sbjct: 326 DLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYT 385
Query: 476 RVL 478
++
Sbjct: 386 MII 388
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 78/181 (43%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ C+ D + + + + + G P ++YN ++ + G + L M
Sbjct: 138 FFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAM 197
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
L PD TY + I C+ K D A F++M+ +GL P T I G+ R
Sbjct: 198 LASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRV 257
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ A + + S + Y+ L K + A +++ EM GL+P+ Y +
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTL 317
Query: 478 L 478
+
Sbjct: 318 I 318
>gi|297849070|ref|XP_002892416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338258|gb|EFH68675.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 459
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 86/180 (47%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+NILIK +CD++ + EM ++ +P +TYN ++G LC+N A LLE+M+
Sbjct: 189 FNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNNDMGKATSLLEDMI 248
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+A+T+ + + C G+++ A M RG +P L + + + +
Sbjct: 249 KKRIRPNAVTFGLLMKGLCCNGEYNEAKKLMFDMEYRGCKPGLVNYGVLMSDLGKRGKID 308
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + + ++Y++L + A L+EM G +PN + YR ++
Sbjct: 309 EAKILLGEMKKRRIKPDFVIYNILVNHLCTEGRVPEAYRTLTEMQMKGCKPNAATYRMIV 368
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ +L+K +C ++ + L+ +M GC+P + Y ++ L K G+ +A LL EM
Sbjct: 259 FGLLMKGLCCNGEYNEAKKLMFDMEYRGCKPGLVNYGVLMSDLGKRGKIDEAKILLGEMK 318
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R PD + Y I + + C G+ A+ +M +G +P AT+ + G F R
Sbjct: 319 KRRIKPDFVIYNILVNHLCTEGRVPEAYRTLTEMQMKGCKPNAATYRMIVDG---FCRIG 375
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNG 466
D + S N+L ++LAS H + P ++S ++K G
Sbjct: 376 D-----------FDSGLNVLNAMLASRH--SPTPATFVRMVSGLIKGG 410
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 80/186 (43%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI +CR D LL +M + P +T+ ++ LC NG+ +A +L+
Sbjct: 221 VVTYNSLIGFLCRNNDMGKATSLLEDMIKKRIRPNAVTFGLLMKGLCCNGEYNEAKKLMF 280
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M R C P + Y + + + GK D A +M KR ++P + +
Sbjct: 281 DMEYRGCKPGLVNYGVLMSDLGKRGKIDEAKILLGEMKKRRIKPDFVIYNILVNHLCTEG 340
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R +AY+ + K + Y ++ + + NVL+ M+ + P + +
Sbjct: 341 RVPEAYRTLTEMQMKGCKPNAATYRMIVDGFCRIGDFDSGLNVLNAMLASRHSPTPATFV 400
Query: 476 RVLKHL 481
R++ L
Sbjct: 401 RMVSGL 406
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 50/130 (38%), Gaps = 4/130 (3%)
Query: 268 GVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGC 327
G R I+ +L L EM K IK YNIL+ +C L EM+ GC
Sbjct: 302 GKRGKIDEAKIL-LGEMKKRRIKPD---FVIYNILVNHLCTEGRVPEAYRTLTEMQMKGC 357
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
+P TY ++ C+ G +L ML P T+ + + G D A
Sbjct: 358 KPNAATYRMIVDGFCRIGDFDSGLNVLNAMLASRHSPTPATFVRMVSGLIKGGNLDHACF 417
Query: 388 FFNQMVKRGL 397
M K+ L
Sbjct: 418 VLEVMGKKKL 427
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 77/182 (42%), Gaps = 35/182 (19%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
VS YN LI +CR + + + LL EM + +TYN ++G CK+G+ + A +LL
Sbjct: 413 VSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLG 472
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EML P+ +TY + C G A QM K G + + T+ IKG+
Sbjct: 473 EMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTG 532
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ EDA + +L+EM++ GL PN + Y
Sbjct: 533 KLEDANR-----------------------------------LLNEMLEKGLNPNRTTYD 557
Query: 476 RV 477
V
Sbjct: 558 VV 559
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 123/267 (46%), Gaps = 22/267 (8%)
Query: 231 KAFGFLPVLISSKALT----KKG----IWRVVEVLNQVGGSCLVSG---VRALIEMFSVL 279
KA+GF P +++ L KKG ++R +L ++ + + LI+ F
Sbjct: 227 KAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKD 286
Query: 280 GLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
AK ++ +R+ + YN LI + L +M +G +P +T+
Sbjct: 287 ENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTF 346
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N ++ CK +A +L +++ ++ P+AIT+ I C+ G + F N M+
Sbjct: 347 NALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLD 406
Query: 395 RGLQPRLATHAAFIKGYFIFYRYED--AYKYVVLSADKYKSSSNML-YSLLASLHDKNNN 451
G+ P ++T+ I G R ++ A K ++ + Y+ ++++ Y++L K+
Sbjct: 407 EGIFPNVSTYNCLIAG---LCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGE 463
Query: 452 PVMAKNVLSEMMKNGLRPNVSVYRRVL 478
P A+ +L EM+ G++PN Y ++
Sbjct: 464 PSKAEKLLGEMLNVGVKPNHVTYNTLM 490
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 64/132 (48%), Gaps = 3/132 (2%)
Query: 282 YEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
Y + + ++ + ++ +NI I +C+ D++ +++ G P +TYN ++
Sbjct: 186 YVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGH 245
Query: 342 CKNGQDAD---ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
CK G A +L+EML P+ IT+ I C+ A N F +M ++GL+
Sbjct: 246 CKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLK 305
Query: 399 PRLATHAAFIKG 410
P + T+ + I G
Sbjct: 306 PNIVTYNSLING 317
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 9/178 (5%)
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N +L L K + + + +EM+ R P+ T+ IFI C+ GK + A + +
Sbjct: 169 NPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKA 228
Query: 395 RGLQPRLATHAAFIKGY------FIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
G P + T+ I G+ YR + K ++ A+K + + ++ L K
Sbjct: 229 WGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEML--ANKI-CPNEITFNTLIDGFCK 285
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
+ N + AKN EM + GL+PN+ Y ++ L + + A L + L L ++
Sbjct: 286 DENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNI 343
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 1/184 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNILIK C++ F+ + LL M + G P L+Y ++ L K+G DA EL +EM
Sbjct: 152 YNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMS 211
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV-KRGLQPRLATHAAFIKGYFIFYRY 417
R +PD + Y I I R G F A + +++ + + P + T+ I G +
Sbjct: 212 VRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKL 271
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+++ + KS +S + K N A+ V EM+++GL P+V Y +
Sbjct: 272 DESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAM 331
Query: 478 LKHL 481
L L
Sbjct: 332 LSGL 335
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 108/237 (45%), Gaps = 9/237 (3%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVI---KKTERKVS--YYNILIKEM 306
R++E G +++ G+ E A +I KK RK++ +N LI
Sbjct: 415 RILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGY 474
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
R + +L EM+ C P ++YN ++ LCK + +DA L+EML PD
Sbjct: 475 VRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDM 534
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
ITY + I CR K D+A N ++Q + + L+P L H I G + + A + +
Sbjct: 535 ITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALE-IFT 593
Query: 427 SADKYKSSSNMLY--SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ +++ +++ L+ K + V A + +++ GL+P++ Y K L
Sbjct: 594 QMRQVNCVPDLVTHNTIMEGLY-KAGDCVEALKIWDRILEAGLQPDIISYNITFKGL 649
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 1/125 (0%)
Query: 289 IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM-RQVGCEPITLTYNYVLGVLCKNGQD 347
++ V YNILI R+ DF ++ + + P TYN ++ LCK G+
Sbjct: 212 VRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKL 271
Query: 348 ADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAF 407
++ E+ M PD T+ I + G F+ A F +M++ GL P + T+ A
Sbjct: 272 DESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAM 331
Query: 408 IKGYF 412
+ G F
Sbjct: 332 LSGLF 336
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 54/121 (44%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K+ + + +NI+I +C ++ +MRQV C P +T+N ++ L K G +
Sbjct: 563 KRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVE 622
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A ++ + +L PD I+Y I C + A F + RG+ P T ++
Sbjct: 623 ALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVR 682
Query: 410 G 410
Sbjct: 683 A 683
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 81/194 (41%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
+ Y +LI +C+ +L E G + T Y+ ++ LCK G A EL+ +
Sbjct: 395 TTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQ 454
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
M ++ + I R K + A + +M + P + ++ I G R
Sbjct: 455 MKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAER 514
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
+ DAY + ++ + YSLL + MA N+ + + L+P++ ++
Sbjct: 515 FSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNI 574
Query: 477 VLKHLHTSHQEHMA 490
++ L T+ + +A
Sbjct: 575 IIHGLCTAQKVDVA 588
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 79/182 (43%), Gaps = 9/182 (4%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
+ + G + + TY ++ LCKNG A +LEE D Y + C+ G
Sbjct: 385 LHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGM 444
Query: 382 FDVAFNFFNQMVKRGLQPRLATHA--AFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
+ A +QM K + +L +H + I GY ++ E+A + K + + + Y
Sbjct: 445 LEQAVELIHQMKKN--RRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSY 502
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA-----KCLS 494
+ + + K A L EM++ GL+P++ Y ++ L + MA +C++
Sbjct: 503 NTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCIN 562
Query: 495 SR 496
R
Sbjct: 563 KR 564
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 75/186 (40%), Gaps = 1/186 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YNI+I +C+ ++ M++ P T++ ++ L K G A ++ +
Sbjct: 255 VETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQ 314
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM+ PD TY + R GK + F +N M K + ++ I+G
Sbjct: 315 EMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNC-CNIVSYNMLIQGLLDNK 373
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ E A Y L ++ + + Y LL + KN A +L E G + Y
Sbjct: 374 KVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYS 433
Query: 476 RVLKHL 481
++ L
Sbjct: 434 SMVHGL 439
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 97/237 (40%), Gaps = 56/237 (23%)
Query: 244 ALTKKGIW-RVVEVLNQVGGS----------CLVSG-VRA--LIEMFSVLGLYEMAKYVI 289
L KKG+ + VE+++Q+ + L++G VRA L E SVL EM
Sbjct: 438 GLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVL--REMKS--- 492
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K V YN +I +C+ F L EM + G +P +TY+ ++ LC+ G+ D
Sbjct: 493 KDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCR-GEKVD 551
Query: 350 ------------------------------------ACELLEEMLGRNCHPDAITYEIFI 373
A E+ +M NC PD +T+ +
Sbjct: 552 MALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIM 611
Query: 374 VYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADK 430
+ G A ++++++ GLQP + ++ KG R DA +++ + D+
Sbjct: 612 EGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDR 668
>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
Length = 629
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 78/175 (44%), Gaps = 6/175 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNILI CR+ +LL EM++VG P TYN +L CK G A ELL +M+
Sbjct: 391 YNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMI 450
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C P IT+ + C+VGK D A M + G+ P + I F+ R +
Sbjct: 451 DDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLID--FLCKRGD 508
Query: 419 DAYKYVVLSADKYKS---SSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
+ K KS + +LL L DK N P A ++ +M + P+
Sbjct: 509 VDLAIELFDEMKEKSVPANVTTFNALLKGLRDK-NMPEKAFELMDQMREERCFPD 562
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L EM + I+ V YN L+ C+ DF +LL +M GC+P +T+ ++
Sbjct: 411 LQEMKEVGIRP---DVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHG 467
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
CK G+ +A +L M HP+ + Y I + C+ G D+A F++M ++ +
Sbjct: 468 YCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPAN 527
Query: 401 LATHAAFIKG 410
+ T A +KG
Sbjct: 528 VTTFNALLKG 537
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M++ G + T YN ++ C+ + +A ELL+EM PD TY + SC+ G
Sbjct: 379 MKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGD 438
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
F +M+ G QP + T + GY + ++A + + + +N++Y+
Sbjct: 439 FAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNT 498
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
L K + +A + EM + + NV+ + +LK L + A
Sbjct: 499 LIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKA 547
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 74/185 (40%), Gaps = 6/185 (3%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEM--RQVGCEPITLTYNYVLGVLCKNGQDADACEL 353
V Y IL+ +C+ +L M + + P +T N V+ LCK+G+ +A
Sbjct: 172 VVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAF 231
Query: 354 LEEMLG--RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
+E+ + C P+ +TY I CRVG +A+ +M G+ + T + G
Sbjct: 232 VEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGL 291
Query: 412 FIFYRYEDAYKYVVLSADKYKSSSN--MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
R A ++ + + YS L NN MA + E M G P
Sbjct: 292 CRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSP 351
Query: 470 NVSVY 474
+ +Y
Sbjct: 352 DAIMY 356
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C+R D +L EM++ T+N +L L A EL+++M
Sbjct: 496 YNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMR 555
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQ 391
C PD +T ++ + + +G+ D F Q
Sbjct: 556 EERCFPDYVTVDVLMEWLPVIGETDRLKRFMQQ 588
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 81/183 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +IK C D K ++ M Q G +TYN ++ C +G A +L+ M
Sbjct: 598 YNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMR 657
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C PD +Y I C++ K + AF FN+MV GL P T+ A I GY + +
Sbjct: 658 DGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLD 717
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + + Y++L K NN A+ + M++ G+ PNV Y ++
Sbjct: 718 TATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMI 777
Query: 479 KHL 481
L
Sbjct: 778 DGL 780
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 68/129 (52%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN+LI + ++ +F G +L M + G P +TY ++ LCKNG + A E+
Sbjct: 735 VQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFN 794
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M+ + C P+ +TY I + GK + A N F ++ + GL P T+ I+ Y +
Sbjct: 795 KMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSG 854
Query: 416 RYEDAYKYV 424
+ E A+ ++
Sbjct: 855 KVEHAFNFL 863
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 78/187 (41%), Gaps = 20/187 (10%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M G +P L YN V+ LCK+G ADA +++++ PD TY I+ CR
Sbjct: 376 MLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHD 435
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
D A FNQM K G +P T++ I G R +A+ + +L+ +
Sbjct: 436 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLI---------REMILHGI 486
Query: 442 LASLHDKNNNPVM----------AKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
L + H P++ A + +M G PNV Y ++ L S +A
Sbjct: 487 LPTAH-TCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAI 545
Query: 492 CLSSRYS 498
L R S
Sbjct: 546 GLFHRMS 552
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 92/218 (42%), Gaps = 4/218 (1%)
Query: 265 LVSGVRALIEMFSVLGLY-EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMR 323
L+ G + +M S GL+ EM + E Y LI C+ LL M+
Sbjct: 671 LICGFCKISKMESAFGLFNEMVDDGLCPNEVT---YTALIDGYCKDEKLDTATSLLEHMK 727
Query: 324 QVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
+ GC P TYN ++ L K + A EL + M+ P+ +TY I C+ G
Sbjct: 728 RSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTS 787
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
+A FN+M+++G P L T+++ I+ + E+A + Y +
Sbjct: 788 LALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMI 847
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + A N L M+K G +P + Y ++K L
Sbjct: 848 EAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 885
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 89/222 (40%), Gaps = 47/222 (21%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +I CR+ D + +M + GCEP T+TY+ ++ LC +G+ +A +L+ EM+
Sbjct: 423 YTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMI 482
Query: 359 -----------------------------------GRNCHPDAITYEIFIVYSCRVGKFD 383
+ C P+ TY I C G
Sbjct: 483 LHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLK 542
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
VA F++M + G+ P T+ A I + Y +VVL+ N L++ +
Sbjct: 543 VAIGLFHRMSRDGVFPNTVTYNALIN--ILVENRRIKYAFVVLNL----MGRNGLFTNIV 596
Query: 444 SLHDKN------NNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
+ ++ +P A V++ M++ G N+ Y ++K
Sbjct: 597 TYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIK 638
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 72/176 (40%)
Query: 303 IKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNC 362
I +C ++ L V+M+ GCEP TY ++ LC +G A L M
Sbjct: 497 IIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGV 556
Query: 363 HPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
P+ +TY I + AF N M + GL + T+ IKGY I + A
Sbjct: 557 FPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAML 616
Query: 423 YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ + S++ + Y+ + + + N A +L M G +P+ Y ++
Sbjct: 617 VMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI 672
>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 89/189 (47%)
Query: 286 KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNG 345
+ V K V YN LI ++ F + L EM + G +P ++Y ++ LCK+
Sbjct: 420 RMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDR 479
Query: 346 QDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
+ DA +L +M+GR P+A Y + I SC + K AF FF++M++ G+ L T+
Sbjct: 480 KLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYN 539
Query: 406 AFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKN 465
I G R + A + A K + + Y+ L S + K+ N + +M
Sbjct: 540 TLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKIL 599
Query: 466 GLRPNVSVY 474
G++P V +
Sbjct: 600 GIKPTVGTF 608
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 90/182 (49%), Gaps = 2/182 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y IL+ +CR + ++L ++ + G P ++YN ++ C+ G A E+M
Sbjct: 328 YCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQME 387
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R P+ IT+ I C G+ D A + +MV++G+ P + T+ + I GY +
Sbjct: 388 ERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFV 447
Query: 419 DAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
++++ DK N++ Y L + K+ + A+ VL++M+ G+ PN +Y +
Sbjct: 448 RCFEFLD-EMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNML 506
Query: 478 LK 479
++
Sbjct: 507 IE 508
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 56/110 (50%)
Query: 311 DFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYE 370
D +L+ M + G P YN VLG LCK + DA +L +EM+ RN P+ +TY
Sbjct: 172 DLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYN 231
Query: 371 IFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
I C+VG + A F +M ++ ++ L T+ + + G R +DA
Sbjct: 232 TLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDA 281
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 8/189 (4%)
Query: 282 YEMAKYVIKK-TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
+E+ K ++K V YN+++ +C+ K R L EM Q P T+TYN ++
Sbjct: 177 FELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDG 236
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
CK G +A E M +N + +TY + C G+ D A +M G P
Sbjct: 237 YCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLP- 295
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
F+ F+F + + L K Y +L + + A+ VL+
Sbjct: 296 ----GGFLS--FVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLA 349
Query: 461 EMMKNGLRP 469
++++NG+ P
Sbjct: 350 KLVENGVTP 358
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 106/284 (37%), Gaps = 47/284 (16%)
Query: 243 KALTKKGIWRVVEVLNQV-GGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNI 301
K++ K G+ V N V GG C V ++ ++F + M + YN
Sbjct: 181 KSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVT--------YNT 232
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
LI C+ + M++ E +TYN +L LC +G+ DA E+L EM G
Sbjct: 233 LIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSG 292
Query: 362 CHP----------------------------DAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
P D TY I + CRVG+ + A ++V
Sbjct: 293 FLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLV 352
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS----NMLYSLLASLHDKN 449
+ G+ P ++ + Y E K +L+ ++ + + ++ + S +
Sbjct: 353 ENGVTPSKISYNILVNAYC----QEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCET 408
Query: 450 NNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
A+ + M++ G+ P V Y ++ + H +C
Sbjct: 409 GEVDHAETWVRRMVEKGVSPTVETYNSLINGY--GQKGHFVRCF 450
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 106/297 (35%), Gaps = 59/297 (19%)
Query: 245 LTKKGIWRVVEVLNQ-VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILI 303
+ +G+ E+ N + SC +S ++ F EM + I T + YN LI
Sbjct: 491 MIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFD-----EMIQSGIDAT---LVTYNTLI 542
Query: 304 KEMCRRCDFKGPRDLLVEMRQVGCEPITLTYN----------------------YVLGV- 340
+ R K DL ++M GC P +TYN +LG+
Sbjct: 543 NGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIK 602
Query: 341 -----------LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFF 389
C+ ++ +EML + PD Y I G A +
Sbjct: 603 PTVGTFHPLIYACRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLH 662
Query: 390 NQMVKRGLQPRLATHAAFIKGYFIFYRYED--------AYKYVVLSADKYKSSSNMLYSL 441
QMV +G+ T+ + I Y R + K +V D Y N+L
Sbjct: 663 QQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTY----NILIKG 718
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYS 498
L L D N A EM++ GL NVS+ +++ L A+ +SS S
Sbjct: 719 LCDLKDFNG----AYFWYREMVERGLLLNVSMCYQLISGLREEGMLREAQIVSSELS 771
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 43/106 (40%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
DL MR+ G P T + N +L L + + +++ PDA+ Y + +
Sbjct: 108 DLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQAA 167
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
+ D F MVK G+ P + + + G R +DA K
Sbjct: 168 VMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARK 213
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 87/182 (47%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N L+ ++ + +G R+L +M G +P LT+N ++ +L K G+ +A +L ++
Sbjct: 209 NTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQ 268
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
+ PD TY I+ CR D+AF F++MVK G P T++ I G R ++
Sbjct: 269 YDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDE 328
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
A + +K + Y+L + + A +++ M K G RPNV Y ++
Sbjct: 329 ALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALIS 388
Query: 480 HL 481
L
Sbjct: 389 GL 390
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 101/242 (41%), Gaps = 33/242 (13%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
LI+ S G ++A ++++ E V YN +I + + F + +M +
Sbjct: 560 TLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQ 619
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P +TY ++ LC+NG+ A ++ +M R C P+ TY I C+ GK D A
Sbjct: 620 GLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA 679
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY------------------------ 421
+M ++GL P T + I G+ + R + A+
Sbjct: 680 EILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKG 739
Query: 422 --KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
K +L +K +YS S H+K+ N + N+L+ M + G P + Y ++
Sbjct: 740 LQKECLLLEEKVAVQHEAVYSF--SPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVS 797
Query: 480 HL 481
L
Sbjct: 798 GL 799
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 77/180 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ LI +C D+L EM + G EP TY + LC + +A EL+ M
Sbjct: 313 YSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMK 372
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R C P+ TY I R+GK +VA +++M+K GL P T+ A I + R+
Sbjct: 373 KRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFS 432
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A K ++ Y+ + + A + +M+K G P V Y ++
Sbjct: 433 TALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLI 492
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 91/219 (41%), Gaps = 2/219 (0%)
Query: 263 SCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
+ L+SG+ L ++ +GLY K + + YN LI E+C F + M
Sbjct: 384 TALISGLSRLGKLEVAIGLYH--KMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWM 441
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
G T TYN ++ LC G A L E+ML P +TY I G
Sbjct: 442 EGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNV 501
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
+ A + M + G +P T+ + G+ + + E A Y + + + + Y+ L
Sbjct: 502 NNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTL 561
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
H K+ +A ++L M + G PNV Y V+ L
Sbjct: 562 IDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGL 600
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 78/179 (43%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI + + LL M++ GCEP TYN ++ K G+ A +
Sbjct: 485 VVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQ 544
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM+ +P+ ++Y I + GK D+A + +M + G P + ++ A I G
Sbjct: 545 EMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKEN 604
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
R+ +A K A++ + + Y+ L +N A + +M K PN+ Y
Sbjct: 605 RFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTY 663
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 84/213 (39%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y LI + R + L +M + G P T+TYN ++ LC G+ + A ++
Sbjct: 380 VQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFH 439
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M G + TY I C G + A F +M+K G P + T+ I GY
Sbjct: 440 WMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKG 499
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+A + + L + Y+ L S K A EM++ GL PN Y
Sbjct: 500 NVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYT 559
Query: 476 RVLKHLHTSHQEHMAKCLSSRYSSLSLGSSVEA 508
++ + +A L R + +VE+
Sbjct: 560 TLIDGHSKDGKVDIALSLLERMEEMGCNPNVES 592
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 102/233 (43%), Gaps = 29/233 (12%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTER---KVSY--YNILIKEMCRRC--------------- 310
+LI+ F VLG + A ++++ K +Y Y++L+K + + C
Sbjct: 700 SLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVY 759
Query: 311 ---------DFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
+F+ +LL M ++GCEP TY+ ++ LC+ G+ +A +L+++M R
Sbjct: 760 SFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERG 819
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
PD Y ++ C+ + D A F+ + +G Q L+ + A I + E+A
Sbjct: 820 FCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQ 879
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+K ++ +++++L K + +L M PN+ Y
Sbjct: 880 ALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTY 932
>gi|218200036|gb|EEC82463.1| hypothetical protein OsI_26904 [Oryza sativa Indica Group]
Length = 346
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 78/184 (42%), Gaps = 3/184 (1%)
Query: 294 RKVSYYNILIKEMCRRCDFKGPRDLLVEMR---QVGCEPITLTYNYVLGVLCKNGQDADA 350
R YN ++ +CRR LL M C P ++Y ++ LC + + A
Sbjct: 75 RDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRRADQA 134
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
LL M D +TY I C + D A +M + G++P + +++ ++G
Sbjct: 135 VGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQG 194
Query: 411 YFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
Y R+ED K V ++K ++Y+ L K A V+ M++ GL PN
Sbjct: 195 YCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPN 254
Query: 471 VSVY 474
V Y
Sbjct: 255 VVTY 258
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 57/113 (50%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y LI+ +C + +L+ EM + G EP + Y+ +L CK+G+ D ++
Sbjct: 150 VVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFV 209
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
EM + PD + Y I C+VGK A + MV+RGL+P + T+ I
Sbjct: 210 EMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLI 262
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 62/128 (48%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V Y+ L++ C+ ++ + VEM + G EP + Y ++ LCK G+ A
Sbjct: 182 EPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHG 241
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+++ M+ R P+ +TY + I C+ G A +M ++G+ P + T+ IKG
Sbjct: 242 VMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLS 301
Query: 413 IFYRYEDA 420
++A
Sbjct: 302 DVLEMDEA 309
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 49/105 (46%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K E V Y LI +C+ K ++ M + G EP +TYN ++ +CK G +
Sbjct: 214 KGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKE 273
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
A +L++M + PD +TY I V + D A +MV+
Sbjct: 274 AIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVR 318
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 91/195 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++ C K L +MR G EP +TY+ ++ LCKNG+ +A ++ + M
Sbjct: 247 YNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMT 306
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R PD TY + C+ G+ + F+ MV+ G++P + T+ I G + + +
Sbjct: 307 KRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMD 366
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A K + + Y L + + + + A + EM+ +G+ PN+ Y +L
Sbjct: 367 EATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIIL 426
Query: 479 KHLHTSHQEHMAKCL 493
+ L + + AK L
Sbjct: 427 QGLFHTRRTAAAKEL 441
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 111/272 (40%), Gaps = 17/272 (6%)
Query: 220 DFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQ-----VGGSCLVSGVRALIE 274
D Y LN GF I +K LT + + + +EVLN V C+ +++
Sbjct: 200 DVVSYNTVLN----GFFKEGIQTK-LTAQAMDKAMEVLNTMVKNGVMPDCMT--YNSILH 252
Query: 275 MFSVLGLYEMAKYVIKK-----TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEP 329
+ G + A +KK E V Y+ L+ +C+ R + M + G EP
Sbjct: 253 GYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEP 312
Query: 330 ITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFF 389
TY +L CK G+ ++ +L + M+ PD ITY I C GK D A
Sbjct: 313 DIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLL 372
Query: 390 NQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKN 449
MV G++P + T+ I GY R +DA S + + Y+++
Sbjct: 373 ASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHT 432
Query: 450 NNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
AK + + K+G + +S Y +L L
Sbjct: 433 RRTAAAKELYVSITKSGTQLELSTYNIILHGL 464
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 88/213 (41%), Gaps = 12/213 (5%)
Query: 279 LGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE-MRQVGCEPITLTYNYV 337
LG + V K + L+K +C D+++ M ++GC P +YN +
Sbjct: 110 LGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNL 169
Query: 338 LGVLCKNGQDADACELLEEML---GRNCHPDAITYEIFIVYSCRVG--------KFDVAF 386
L LC + +A ELL M G PD ++Y + + G D A
Sbjct: 170 LKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAM 229
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
N MVK G+ P T+ + + GY + ++A + + + YS L +
Sbjct: 230 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYL 289
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
KN A+ + M K GL P+++ YR +L+
Sbjct: 290 CKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQ 322
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 91/225 (40%), Gaps = 37/225 (16%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E ++ Y L++ C+ L M ++G +P +TYN ++ C G+ +A +
Sbjct: 311 EPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATK 370
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
LL M+ PD +TY I CRV + D A F +MV G+ P + T+ ++G F
Sbjct: 371 LLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLF 430
Query: 413 IFYRYEDAYKYVV-------------------------LSADKYKSSSNMLYSLLASLHD 447
R A + V L+ + + N+ + L L
Sbjct: 431 HTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDL-QLET 489
Query: 448 KNNNPVM-----------AKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ N ++ AK++ + NGL P+V Y + ++L
Sbjct: 490 RTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENL 534
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 4/119 (3%)
Query: 364 PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY 423
P TY I I CR G+ D+ F +VK+G + T +KG R DA
Sbjct: 90 PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149
Query: 424 VVLSADKYKSSSNMLY--SLLASLHDKNNNPVMAK--NVLSEMMKNGLRPNVSVYRRVL 478
V+ + ++ +LL L D+N + + +++++ G P+V Y VL
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVL 208
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 75/211 (35%), Gaps = 31/211 (14%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
MA+ K V Y ILI CR L + + G +T+ +L LC
Sbjct: 80 MARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCA 139
Query: 344 NGQDADACEL-LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR---GLQP 399
+ + +DA ++ L M C PD +Y + C + A + M G P
Sbjct: 140 DKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPP 199
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
+ ++ + G+F + L A DK A VL
Sbjct: 200 DVVSYNTVLNGFF---------------------KEGIQTKLTAQAMDK------AMEVL 232
Query: 460 SEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
+ M+KNG+ P+ Y +L +S Q A
Sbjct: 233 NTMVKNGVMPDCMTYNSILHGYCSSGQPKEA 263
>gi|125570756|gb|EAZ12271.1| hypothetical protein OsJ_02159 [Oryza sativa Japonica Group]
Length = 596
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 97/216 (44%), Gaps = 35/216 (16%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+NIL+ +CR D + + L E+ + G EP +TYN +L C+ G+ DA L + M
Sbjct: 213 FNILVAALCRGEDAERAQGFLEELEEQGFEPDGVTYNTLLSGYCRRGRLQDALHLFDVMP 272
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R PD +++ + + C+ G+ A F++M++ GL P ++ I GY R
Sbjct: 273 YRRVQPDLVSHTVVMDALCKAGRVRDARRMFDRMIQSGLSPDAVAYSVLIAGYCNEGRLR 332
Query: 419 D------------------AYKYVVLSADKYK---SSSNML--------------YSLLA 443
+ A K VV S K+ + NM+ YS L
Sbjct: 333 EARFLLMEMVGCGFSSEGFALKVVVESHVKFSKLLTCLNMVAPIRKHGVVIPSQSYSCLI 392
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
++ P A+ +L M+++G P++++Y +++
Sbjct: 393 GALCEDMRPNAARGLLHWMIEDGHSPSLAIYNMIIE 428
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 2/146 (1%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACE-LLEEMLGRNCHPDAITYEIFIVYSCRVG 380
M + G P T+N ++ LC+ G+DA+ + LEE+ + PD +TY + CR G
Sbjct: 201 MARAGVRPNAHTFNILVAALCR-GEDAERAQGFLEELEEQGFEPDGVTYNTLLSGYCRRG 259
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+ A + F+ M R +QP L +H + R DA + S + YS
Sbjct: 260 RLQDALHLFDVMPYRRVQPDLVSHTVVMDALCKAGRVRDARRMFDRMIQSGLSPDAVAYS 319
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNG 466
+L + + A+ +L EM+ G
Sbjct: 320 VLIAGYCNEGRLREARFLLMEMVGCG 345
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ LI +C R LL M + G P YN ++ C+ +A ++ EM+
Sbjct: 388 YSCLIGALCEDMRPNAARGLLHWMIEDGHSPSLAIYNMIIECFCQCDIVEEALDVKVEMI 447
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
R D TY I CR+G+ + +M++ G QP A +A + G+
Sbjct: 448 SREVRLDFNTYRALITCFCRLGRSLDGESIMAEMIESGFQPNEAICSALVCGF 500
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/111 (20%), Positives = 48/111 (43%)
Query: 364 PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY 423
P+A T+ I + CR + A F ++ ++G +P T+ + GY R +DA
Sbjct: 208 PNAHTFNILVAALCRGEDAERAQGFLEELEEQGFEPDGVTYNTLLSGYCRRGRLQDALHL 267
Query: 424 VVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + + ++++ K A+ + M+++GL P+ Y
Sbjct: 268 FDVMPYRRVQPDLVSHTVVMDALCKAGRVRDARRMFDRMIQSGLSPDAVAY 318
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 34/244 (13%)
Query: 199 SLVIDN---CGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALT----KKGIW 251
S++ID CGR D+ R+L + KA G +P +IS +L + G W
Sbjct: 487 SIIIDGLCKCGREDEA---RELFKEM---------KALGVIPDVISYTSLIHGFCRSGKW 534
Query: 252 RVVEVL----NQVGGSCLVSGVRALIEMF----SVLGLYEMAKYVIKKT-ERKVSYYNIL 302
+ + L +G V+ LI+M V+ E+ + +I++ Y L
Sbjct: 535 KDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTL 594
Query: 303 IKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML---- 358
+K +C L ++M+++GC P +TY ++ LC+ G A EL ++ML
Sbjct: 595 VKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTG 654
Query: 359 --GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
G N PD I+Y I I C+ G+ D A F +M G+ P + ++ + I G+ +
Sbjct: 655 QYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGK 714
Query: 417 YEDA 420
EDA
Sbjct: 715 LEDA 718
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 88/189 (46%), Gaps = 6/189 (3%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y LI CR +K + L EM +G +P T++ ++ +LCK G+ +A ELLE
Sbjct: 518 VISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLE 577
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+ R C P+ +TY + C + A F +M K G P + T+ +KG
Sbjct: 578 VMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTG 637
Query: 416 RYEDA---YKYVVLSADKYKSS---SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
+ A +K ++ +Y ++ + YS++ K+ A+ + EM G+ P
Sbjct: 638 NIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIP 697
Query: 470 NVSVYRRVL 478
NV Y ++
Sbjct: 698 NVISYTSLI 706
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 6/204 (2%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y LI CR ++ + L EM VG T + ++ +LCK G+ +A ELLE
Sbjct: 156 VISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLE 215
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+ R C D +TY I C + A F M K G +P + +KG
Sbjct: 216 VMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTG 275
Query: 416 RYEDA---YKYVVLSADKY--KSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
A ++ ++ +Y K ++ YS++ K+ A+ + EM G+ P
Sbjct: 276 NINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMP 335
Query: 470 NVSVYRRVLKHLHTSHQEHMAKCL 493
+V Y ++ S + AKCL
Sbjct: 336 DVISYTTLIHGFCLSGKWEKAKCL 359
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 122/285 (42%), Gaps = 24/285 (8%)
Query: 225 QVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEM 284
Q+ L + G +P +++ L K G C ++ +E+ + L +
Sbjct: 428 QLFLKMQKLGCMPNVVTCATLMK--------------GLCQSGNIKIALELHKNM-LSDT 472
Query: 285 AKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKN 344
+ Y I +SY +I+I +C+ R+L EM+ +G P ++Y ++ C++
Sbjct: 473 SPYGINCKPNAISY-SIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRS 531
Query: 345 GQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
G+ DA L EM+ PD T+ + I C+ GK A M++RG P T+
Sbjct: 532 GKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTY 591
Query: 405 AAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY--SLLASLHDKNNNPV---MAKNVL 459
+KG + R +A + + + K +++ +L+ L N + K +L
Sbjct: 592 TTLVKGLCMNDRISEATQ-LFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKML 650
Query: 460 SEMMKNG--LRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSL 502
S+ + G +P+V Y ++ L +E A+ L +L +
Sbjct: 651 SDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGV 695
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 107/248 (43%), Gaps = 10/248 (4%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
G C + +++ + L + +Y IK +SY +I+I +C+ R+L E
Sbjct: 270 GLCQTGNINTALQLHQEM-LNDTGRYGIKCKPTLISY-SIIIDGLCKDRREDEARELFKE 327
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M+ G P ++Y ++ C +G+ A L EML PD T + I C+ GK
Sbjct: 328 MKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGK 387
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY-- 439
A +++RG P + T +KG + +R A + + L K N++
Sbjct: 388 VIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQ-LFLKMQKLGCMPNVVTCA 446
Query: 440 SLLASLHDKNNNPV---MAKNVLSEMMKNGL--RPNVSVYRRVLKHLHTSHQEHMAKCLS 494
+L+ L N + + KN+LS+ G+ +PN Y ++ L +E A+ L
Sbjct: 447 TLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELF 506
Query: 495 SRYSSLSL 502
+L +
Sbjct: 507 KEMKALGV 514
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 6/116 (5%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQ------VGCEPITLTYNYVLGVLCKNGQDADACE 352
Y L+K +C+ + L EM + C+P ++Y+ ++ LCK+ ++ +A E
Sbjct: 264 YGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARE 323
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
L +EM + PD I+Y I C GK++ A FN+M+ G+QP + T + I
Sbjct: 324 LFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLI 379
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 82/191 (42%), Gaps = 6/191 (3%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M VG +P T ++ + CK G+ +A ELLE M+ R C D +TY I C +
Sbjct: 1 MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA---YKYVVLSADKY--KSSSN 436
A F M K G +P + +KG + A ++ ++ +Y K
Sbjct: 61 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120
Query: 437 ML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSS 495
++ YS++ K+ A+ + EM G+ P+V Y ++ S + AKCL +
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180
Query: 496 RYSSLSLGSSV 506
+ + S V
Sbjct: 181 EMLDVGIRSDV 191
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 87/189 (46%), Gaps = 6/189 (3%)
Query: 299 YNILIKEMCRRCDFKGP----RDLLVEMRQVG--CEPITLTYNYVLGVLCKNGQDADACE 352
Y L+K +C+ +++L + Q G C+P ++Y+ ++ LCK+ ++ +A E
Sbjct: 83 YGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARE 142
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
L +EM + PD I+Y I CR GK++ A FN+M+ G++ + T + I
Sbjct: 143 LFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILC 202
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
+ +A + + + + + YS L + A + M K G RP+
Sbjct: 203 KEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAI 262
Query: 473 VYRRVLKHL 481
Y ++K L
Sbjct: 263 AYGTLMKGL 271
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 80/183 (43%), Gaps = 6/183 (3%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V+ +LI C+ +LL M Q GC +TY+ ++ LC + ++A +L
Sbjct: 10 VTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFM 69
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ------PRLATHAAFIK 409
M C PDAI Y + C+ GK ++A + +M+ Q P L +++ I
Sbjct: 70 SMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIID 129
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
G R ++A + + + Y+ L ++ AK + +EM+ G+R
Sbjct: 130 GLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRS 189
Query: 470 NVS 472
+V+
Sbjct: 190 DVT 192
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 92/213 (43%), Gaps = 11/213 (5%)
Query: 271 ALIEMFSVLGLYEMAKYVIKK-----TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
+LI F G +E AK + + V+ ++LI +C+ +LL M Q
Sbjct: 161 SLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQR 220
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
GC +TY+ ++ LC + ++A L M C PDAI Y + C+ G + A
Sbjct: 221 GCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTA 280
Query: 386 FNFFNQMV----KRGL--QPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
+M+ + G+ +P L +++ I G R ++A + + + Y
Sbjct: 281 LQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISY 340
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
+ L + AK + +EM+ G++P+V+
Sbjct: 341 TTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVT 373
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+I+I +C+ R+L EM+ +G P ++Y ++ C++G+ DA L
Sbjct: 664 VISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFN 723
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
EM+ + +A+TY + I C+ G+ D A F +M
Sbjct: 724 EMVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKM 758
>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Brachypodium distachyon]
Length = 801
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 83/199 (41%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
+ Y +L+ +C+R + EM + G P Y +L LC G+ DA LL
Sbjct: 215 TTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCS 274
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
M C PD +TY +F+ C+ G+ D AF+ F + G L ++ I G F R
Sbjct: 275 MKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGR 334
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
+++ Y K S LY++L + A +L EM G P+ Y
Sbjct: 335 FDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNT 394
Query: 477 VLKHLHTSHQEHMAKCLSS 495
+LK L A+ L S
Sbjct: 395 LLKALFDVGNIDRAQSLMS 413
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 104/243 (42%), Gaps = 25/243 (10%)
Query: 257 LNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPR 316
L +G SCL+ G+ L Y + + K ++ Y ILI+ K
Sbjct: 317 LGLIGYSCLIDGLFQAGRFDEGLSYY--TEMLGKSISPDITLYTILIRRFAEAGRTKDAF 374
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
LL EM+ G P T YN +L L G A L+ EML N D+ T+ I I
Sbjct: 375 LLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGL 434
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF----------IFYRYE-----DAY 421
C+ G D A F++M + G P + T+ A I G + +F++ E +
Sbjct: 435 CKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLF 494
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHD---KNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ L A++ + + + L L D ++ + A +L ++++G+ P+V Y ++
Sbjct: 495 LRLTLGANQVRDTES-----LRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLI 549
Query: 479 KHL 481
L
Sbjct: 550 NGL 552
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 62/172 (36%), Gaps = 48/172 (27%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYN------YVLGVL--------- 341
+ +NI+I +C++ + EM + GC P +TYN Y G+L
Sbjct: 425 TTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHK 484
Query: 342 ---------------------------------CKNGQDADACELLEEMLGRNCHPDAIT 368
C++GQ A +LL ++ PD +T
Sbjct: 485 MEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVT 544
Query: 369 YEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
Y I C+ D A F ++ +G+ P T+ I G + +R DA
Sbjct: 545 YNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDA 596
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 42/99 (42%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M C P YN V VL G A L M+ C P++ TY + + C+ G
Sbjct: 170 MGDFDCRPTAFVYNAVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGM 229
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
A F++M++RG+ P + + + R EDA
Sbjct: 230 AVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDA 268
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 74/188 (39%), Gaps = 22/188 (11%)
Query: 244 ALTKKG-IWRVVEVLNQVG-GSC--LVSGVRALIEMFSVLGLYEMAKYVIKKTE------ 293
L KKG I + ++V +++G C V ALI+ G+ E A+ + K E
Sbjct: 433 GLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPS 492
Query: 294 ------------RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
R L+ MC+ LL + + G P +TYN ++ L
Sbjct: 493 LFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGL 552
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
CK A L +E+ + PD ITY I R + + A F +++ G P L
Sbjct: 553 CKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSL 612
Query: 402 ATHAAFIK 409
+ ++
Sbjct: 613 PIYNTMMR 620
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
Query: 278 VLGLYEMAKYVIKK-TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNY 336
VL Y++ + +I+ V YN LI +C+ + G L E++ G P +TY
Sbjct: 523 VLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGT 582
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFF 389
++ L + ++ DA L + +L P Y + CR+ K A N +
Sbjct: 583 LIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLW 635
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 111/249 (44%), Gaps = 15/249 (6%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEM 306
RV+ +L + G V A+I F E AK V+ + +RK V +NI+I
Sbjct: 31 RVMGILEK-HGKPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTF 89
Query: 307 CRRCDFKGPRDLLVE-----MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
C KG DL ++ ++ C+P +TY ++ G +A +LL+EML R
Sbjct: 90 CG----KGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRG 145
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
PD TY + C+ GK D AF F + RG +P + T+ ++ ++++
Sbjct: 146 LEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGE 205
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K++ + + + YS+L S ++ + N++ M + GL P+ Y ++
Sbjct: 206 KWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAF 265
Query: 482 HTSHQEHMA 490
+ MA
Sbjct: 266 CREGKLDMA 274
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 96/209 (45%), Gaps = 2/209 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN++ + +C+ + + + GC+P +TYN +L L G+ + + + E+
Sbjct: 153 YNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIF 212
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R C P+ +TY I I CR GK + + N M ++GL P + I + + +
Sbjct: 213 SRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLD 272
Query: 419 DAYKYV-VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
A +++ + D + +++A+L KN N A + ++ + G PNVS Y +
Sbjct: 273 MAIEFLDCMICDGFLPDIVNYNTIMAALC-KNGNGDHAVEIFGKLDEVGCPPNVSSYNTM 331
Query: 478 LKHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
L L +S + A + S+ S + V
Sbjct: 332 LSALWSSGDRYRALGMISQMLSKGIDPDV 360
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 79/183 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ILI+ LL EM G EP T TYN + LCK G+ A E + +
Sbjct: 118 YTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLN 177
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R C PD ITY I + GK+D + +++ RG +P + T++ I + E
Sbjct: 178 SRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIE 237
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
++ V + +K + Y L + + MA L M+ +G P++ Y ++
Sbjct: 238 ESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIM 297
Query: 479 KHL 481
L
Sbjct: 298 AAL 300
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 80/197 (40%), Gaps = 35/197 (17%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++ +C+ + ++ ++ +VGC P +YN +L L +G A ++ +ML
Sbjct: 293 YNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQML 352
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD ITY I CR G D A M+ QP + ++ + G +R +
Sbjct: 353 SKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRID 412
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA + VL+ M++NG +PN + Y ++
Sbjct: 413 DAIE-----------------------------------VLAAMIENGCQPNETTYTLLI 437
Query: 479 KHLHTSHQEHMAKCLSS 495
+ + S A L++
Sbjct: 438 EGIGFSGSRTQAMELAN 454
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 92/206 (44%), Gaps = 6/206 (2%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
M++ + E V Y+ILI +CR + +L+ M++ G P Y+ ++ C+
Sbjct: 208 MSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCR 267
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
G+ A E L+ M+ PD + Y + C+ G D A F ++ + G P +++
Sbjct: 268 EGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSS 327
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSAD---KYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
+ + + D Y+ + + + K + Y+ L S ++ A +L+
Sbjct: 328 YNTMLSA---LWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLA 384
Query: 461 EMMKNGLRPNVSVYRRVLKHLHTSHQ 486
+M+ +PN+ Y+ VL L +H+
Sbjct: 385 DMLSGRFQPNIVSYKTVLLGLCKAHR 410
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 57/115 (49%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
VS YN ++ + D ++ +M G +P +TYN ++ LC++G +A LL
Sbjct: 325 VSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLA 384
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ML P+ ++Y+ ++ C+ + D A M++ G QP T+ I+G
Sbjct: 385 DMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEG 439
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 1/139 (0%)
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
N ++ D + +L ++ PD Y I C+ + + A ++M ++G P + T
Sbjct: 22 NSRNIDKATRVMGILEKHGKPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVT 81
Query: 404 HAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM 462
H I + + + A K + L D + + Y++L + A +L EM
Sbjct: 82 HNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEM 141
Query: 463 MKNGLRPNVSVYRRVLKHL 481
+ GL P+ Y + + L
Sbjct: 142 LSRGLEPDTFTYNVITRGL 160
>gi|125526348|gb|EAY74462.1| hypothetical protein OsI_02350 [Oryza sativa Indica Group]
Length = 596
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 97/216 (44%), Gaps = 35/216 (16%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+NIL+ +CR D + + L E+ + G EP +TYN +L C+ G+ DA L + M
Sbjct: 213 FNILVAALCRGEDAERAQGFLEELEEQGFEPDGVTYNTLLSGYCRRGRLQDALHLFDVMP 272
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R PD +++ + + C+ G+ A F++M++ GL P ++ I GY R
Sbjct: 273 YRRVQPDLVSHTVVMDALCKAGRVRDARRMFDRMIQSGLSPDAVAYSVLIAGYCNEGRLR 332
Query: 419 D------------------AYKYVVLSADKYK---SSSNML--------------YSLLA 443
+ A K VV S K+ + NM+ YS L
Sbjct: 333 EARFLLMEMVGCGFSSEGFALKVVVESHVKFSKLLTCLNMVAPIRKHGVVIPSQSYSCLI 392
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
++ P A+ +L M+++G P++++Y +++
Sbjct: 393 GALCEDMRPNAARGLLHWMIEDGHSPSLAIYNMIIE 428
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 2/146 (1%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACE-LLEEMLGRNCHPDAITYEIFIVYSCRVG 380
M + G P T+N ++ LC+ G+DA+ + LEE+ + PD +TY + CR G
Sbjct: 201 MARAGVRPNAHTFNILVAALCR-GEDAERAQGFLEELEEQGFEPDGVTYNTLLSGYCRRG 259
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+ A + F+ M R +QP L +H + R DA + S + YS
Sbjct: 260 RLQDALHLFDVMPYRRVQPDLVSHTVVMDALCKAGRVRDARRMFDRMIQSGLSPDAVAYS 319
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNG 466
+L + + A+ +L EM+ G
Sbjct: 320 VLIAGYCNEGRLREARFLLMEMVGCG 345
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ LI +C R LL M + G P YN ++ C+ +A ++ EM+
Sbjct: 388 YSCLIGALCEDMRPNAARGLLHWMIEDGHSPSLAIYNMIIECFCQCDIVEEALDVKVEMI 447
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
R D TY I CR+G+ +M++ G QP A +A + G+
Sbjct: 448 SREVRLDFNTYRALITCFCRLGRSLDGELIMAEMIESGFQPNEAICSALVCGF 500
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/111 (20%), Positives = 48/111 (43%)
Query: 364 PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY 423
P+A T+ I + CR + A F ++ ++G +P T+ + GY R +DA
Sbjct: 208 PNAHTFNILVAALCRGEDAERAQGFLEELEEQGFEPDGVTYNTLLSGYCRRGRLQDALHL 267
Query: 424 VVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + + ++++ K A+ + M+++GL P+ Y
Sbjct: 268 FDVMPYRRVQPDLVSHTVVMDALCKAGRVRDARRMFDRMIQSGLSPDAVAY 318
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 100/214 (46%), Gaps = 9/214 (4%)
Query: 270 RALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEP 329
R + E F++ ++ V K + YN LI +C C++K LL EM P
Sbjct: 215 RQVTEAFNLF-----SEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMP 269
Query: 330 ITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFF 389
+++N V+ LCK G+ +A +++++M+ R P+ +TY + C + + D A F
Sbjct: 270 DVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVF 329
Query: 390 NQMVKRGLQPRLATHAAFIKGYFIFYRYEDA-YKYVVLSADKYKSSSNMLYSLLASL-HD 447
+ MV +G P + ++ I GY R + A Y + + + + +L+ L H
Sbjct: 330 DTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHV 389
Query: 448 KNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ +A + EM+ PN+ YR +L +L
Sbjct: 390 ERLQDAIA--LFHEMVACSQIPNLVTYRILLDYL 421
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 93/222 (41%), Gaps = 8/222 (3%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+ G C V A I + + V K + V YN +I +C+ +L
Sbjct: 173 INGLCKVGNTSAAIRL--------LGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLF 224
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
EM G P TYN ++ LC + LL EM+ PD +++ + C+
Sbjct: 225 SEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKE 284
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
GK A + ++M++RG++P + T+ A + G+ + ++A K K + + Y
Sbjct: 285 GKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISY 344
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ L + + K A + EM + L P+ Y ++ L
Sbjct: 345 NTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGL 386
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 5/203 (2%)
Query: 276 FSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYN 335
FSVL AK + + + + LI+ + L +M G P +TY
Sbjct: 116 FSVL-----AKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYG 170
Query: 336 YVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR 395
++ LCK G + A LL M+ +NC P+ Y I C+ + AFN F++MV +
Sbjct: 171 TLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTK 230
Query: 396 GLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMA 455
G+ P + T+ + I ++ + D + ++ + K A
Sbjct: 231 GISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEA 290
Query: 456 KNVLSEMMKNGLRPNVSVYRRVL 478
+V+ +M++ G+ PNV Y ++
Sbjct: 291 HDVVDKMIQRGVEPNVVTYTALM 313
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 80/183 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ LI +C + L EM P +TY +L LCKN A+A LL+ +
Sbjct: 379 YSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIE 438
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
G N PD I I CR G+ + A + F+ + +GLQP + T++ I G +
Sbjct: 439 GSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLD 498
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A K + + + +Y+ + +NN A +L EM+ G + S +
Sbjct: 499 EASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFV 558
Query: 479 KHL 481
K L
Sbjct: 559 KML 561
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 72/180 (40%), Gaps = 1/180 (0%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M G P T + ++ C + A +L ++L PD T+ I G
Sbjct: 86 QMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEG 145
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
K A + F++M+ G +P + T+ I G A + + K + Y+
Sbjct: 146 KIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYN 205
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL-HTSHQEHMAKCLSSRYSS 499
+ K+ A N+ SEM+ G+ P++ Y ++ L + +H+A L+ S
Sbjct: 206 TIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDS 265
Score = 45.4 bits (106), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 68/159 (42%), Gaps = 2/159 (1%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P T+ +N +L + K + L +M P+ T I I C + + AF+
Sbjct: 59 PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA-YKYVVLSADKYKSSSNMLYSLLASLHD 447
+++K G QP AT I+G ++ + +A + + + + ++ +L+ L
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLC- 177
Query: 448 KNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
K N A +L M++ +PNV Y ++ L Q
Sbjct: 178 KVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQ 216
>gi|255660962|gb|ACU25650.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 376
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 2/187 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI + F+ + EM + C P +TYN ++ LCKN +A L++
Sbjct: 164 VHVYNTLINGLAGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVK 223
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
E+L + P ITY + + C K + A +NQ+ +G +P + H I G
Sbjct: 224 ELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVG 283
Query: 416 RYEDAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + A + +++K + N++ ++ L K+ + A + + +++NGL P++ Y
Sbjct: 284 KIQLALS-LYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISY 342
Query: 475 RRVLKHL 481
LK L
Sbjct: 343 NITLKGL 349
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 98/226 (43%)
Query: 282 YEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+E+ + + + R VS +NI+++ + + M++ G ++TY ++
Sbjct: 45 FELWEMMGSEGNRSVSSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGF 104
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
CKNG + +LE + DA Y I C+ D A + N M+K G +P +
Sbjct: 105 CKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNV 164
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
+ I G ++EDA + + S + + Y+ L + KN A N++ E
Sbjct: 165 HVYNTLINGLAGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKE 224
Query: 462 MMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSVE 507
++ GL P V Y ++K L H+ A L ++ +S V+
Sbjct: 225 LLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQ 270
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 79/179 (44%), Gaps = 1/179 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI C+ D + L EM G P + YN ++ LCK G+ A EL +
Sbjct: 661 VFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFD 720
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
E+ ++ PD +TY I C+ G AF F++M+ +G+ P + I G
Sbjct: 721 EIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEG 780
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
E A + K S + SL+ S K+ + A+ + +M+ L PN+ Y
Sbjct: 781 NLEKALSLFHEAQQKSVGSLSAFNSLIDSFC-KHGKVIEARELFDDMVDKKLTPNIVTY 838
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 88/209 (42%), Gaps = 5/209 (2%)
Query: 271 ALIEMFSVLGLYEMA-----KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI+ F G E A + + + + V YN +I + + + L EM
Sbjct: 351 ALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMA 410
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G EP T TYN ++ K+ A ACELL EM R P TY + I C A
Sbjct: 411 GLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKA 470
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
+QM++ G++P + + IK Y RYE A + + + Y+ L
Sbjct: 471 NEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIG 530
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ AK +L +M + G++PN Y
Sbjct: 531 LCRAKKVEEAKMLLVDMGEKGIKPNAHTY 559
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 88/192 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +L+ C++ K + + M G P TY ++ K G +A + +EM+
Sbjct: 314 YTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMI 373
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R + +TY I + G+ A + FN+M+ GL+P T+ I GY +
Sbjct: 374 TRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMA 433
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + + + + S YS+L S +++ A VL +M++NG++PNV +Y ++
Sbjct: 434 KACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLI 493
Query: 479 KHLHTSHQEHMA 490
K + MA
Sbjct: 494 KAYVQESRYEMA 505
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +CR + + LLV+M + G +P TY + + K+G+ A ++ML
Sbjct: 524 YNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDML 583
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ + Y I I C VG A + F M+++GL P + ++A I + +
Sbjct: 584 SSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTK 643
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + LY+ L S K + A + EM+ NG+ PN+ VY ++
Sbjct: 644 EAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLI 703
Query: 479 KHL 481
L
Sbjct: 704 NGL 706
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 3/197 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y +IK C+ D + +L EM + C+P TYN +G LC+ G +A E+ +
Sbjct: 242 VYTYTNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLCQTGAVDEALEVKK 300
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+ + PD TY + + C+ + A F M GL P T+ A I G+
Sbjct: 301 LMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEG 360
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E+A + + + + Y+ + K A ++ +EM+ GL P+ Y
Sbjct: 361 NIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYN 420
Query: 476 RVLKHLHTSHQEHMAKC 492
++ SH MAK
Sbjct: 421 LLIDGYLKSHD--MAKA 435
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 67/156 (42%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ Y+ +I + + K + ++ + G P YN ++ CK G A +L +
Sbjct: 626 IRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYD 685
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EML +P+ + Y I C++G+ A F+++ ++ L P + T++ I GY
Sbjct: 686 EMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSG 745
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNN 451
+A+K K S +Y +L K N
Sbjct: 746 NLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGN 781
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 85/191 (44%), Gaps = 7/191 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ILI + + + L E +Q ++ +N ++ CK+G+ +A EL ++M+
Sbjct: 769 YCILIDGCGKEGNLEKALSLFHEAQQKSVGSLS-AFNSLIDSFCKHGKVIEARELFDDMV 827
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+ +TY I I + + A F M R + P T+ + + Y +
Sbjct: 828 DKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSY---NQIG 884
Query: 419 DAYKYVVLSAD---KYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ +K + L D + + + Y ++AS + K + A +L++ + G++ V+
Sbjct: 885 NRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFD 944
Query: 476 RVLKHLHTSHQ 486
++ HL Q
Sbjct: 945 ALIFHLCKEKQ 955
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 47/108 (43%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
+K+ +S +N LI C+ R+L +M P +TY ++ K +
Sbjct: 794 QKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEE 853
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
A +L +M RN P+ +TY ++ ++G + F M RG+
Sbjct: 854 AEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGI 901
>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
Length = 641
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 95/228 (41%), Gaps = 5/228 (2%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
LI+ + G EMA + + + K V Y +I C++ DFK LL+EM
Sbjct: 225 TLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSR 284
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G YN ++ K+G A E +E M+ C PD +TY I SCR GK A
Sbjct: 285 GLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEA 344
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
Q + +GL P ++ I Y Y+ A +++ ++ + Y L
Sbjct: 345 DQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHG 404
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
+A + +M++ G+ P+ +Y ++ L + AK L
Sbjct: 405 LVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLL 452
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 5/205 (2%)
Query: 272 LIEMFSVLGLYEMA-KYVIKKTER----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI + G Y+ A ++I+ TER + Y L+ + + + +M + G
Sbjct: 366 LIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERG 425
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
P YN ++ LCK + A LL EML ++ PDA Y + R G D A
Sbjct: 426 VFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEAR 485
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
F +++G+ P + + A IKGY F +DA + ++ + YS + +
Sbjct: 486 KLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGY 545
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNV 471
K ++ A+ + EM+K +PNV
Sbjct: 546 VKQHDLDGAQKMFREMVKMKCKPNV 570
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 133/350 (38%), Gaps = 33/350 (9%)
Query: 151 LLSMSVSLSNASVIEILRVLNSEKVSALCF---LKYMREIMPEFYKNSDICSLV-----I 202
LL+M V L IEI R V LC L+ R+++ + + I +++ I
Sbjct: 171 LLNMLVKLGR---IEIARKFTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLI 227
Query: 203 DNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALT----KKGIWRVVEVL- 257
D + D E L + K GFLP + + A+ KKG ++ ++ L
Sbjct: 228 DGYCKKGDMEMANGLFIEL---------KLKGFLPTVETYGAIINGFCKKGDFKAIDRLL 278
Query: 258 ---NQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNILIKEMCRR 309
N G + V +I+ G A I+ + + YN LI CR
Sbjct: 279 MEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRD 338
Query: 310 CDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITY 369
LL + G P +Y ++ CK G A L EM R PD +TY
Sbjct: 339 GKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTY 398
Query: 370 EIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSAD 429
+ G+ DVA +M++RG+ P + + G ++ A + D
Sbjct: 399 GALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLD 458
Query: 430 KYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
+ +Y+ L +N N A+ + ++ G+ P + Y ++K
Sbjct: 459 QSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIK 508
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 87/182 (47%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N L+ ++ + +G R+L +M G +P LT+N ++ +L K G+ +A +L ++
Sbjct: 167 NTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQ 226
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
+ PD TY I+ CR D+AF F++MVK G P T++ I G R ++
Sbjct: 227 YDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDE 286
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
A + +K + Y+L + + A +++ M K G RPNV Y ++
Sbjct: 287 ALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALIS 346
Query: 480 HL 481
L
Sbjct: 347 GL 348
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 77/180 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ LI +C D+L EM + G EP TY + LC + +A EL+ M
Sbjct: 271 YSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMK 330
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R C P+ TY I R+GK +VA +++M+K GL P T+ A I + R+
Sbjct: 331 KRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFS 390
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A K ++ Y+ + + A + +M+K G P V Y ++
Sbjct: 391 TALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLI 450
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 11/229 (4%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI+ S G ++A ++K+ E V YN +I + + F + +M +
Sbjct: 518 ALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQ 577
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P +TY ++ LC+NG+ A ++ +M R C P+ TY I C+ GK D A
Sbjct: 578 GLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA 637
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV-LSADKYKSSSNMLYSLLAS 444
+M + G +P L T++ + G R+ +A + V + + + YSLL +
Sbjct: 638 ----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIA 693
Query: 445 LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
H KN A + + G + ++S+YR ++ L + Q A+ L
Sbjct: 694 -HCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQAL 741
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 91/219 (41%), Gaps = 2/219 (0%)
Query: 263 SCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
+ L+SG+ L ++ +GLY K + + YN LI E+C F + M
Sbjct: 342 TALISGLSRLGKLEVAIGLYH--KMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWM 399
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
G T TYN ++ LC G A L E+ML P +TY I G
Sbjct: 400 EGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNV 459
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
+ A + M + G +P T+ + G+ + + E A Y + + + + Y+ L
Sbjct: 460 NNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTAL 519
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
H K+ +A ++L M + G PNV Y V+ L
Sbjct: 520 IDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGL 558
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 84/213 (39%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y LI + R + L +M + G P T+TYN ++ LC G+ + A ++
Sbjct: 338 VQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFH 397
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M G + TY I C G + A F +M+K G P + T+ I GY
Sbjct: 398 WMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKG 457
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+A + + L + Y+ L S K A EM++ GL PN Y
Sbjct: 458 NVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYT 517
Query: 476 RVLKHLHTSHQEHMAKCLSSRYSSLSLGSSVEA 508
++ + +A L R + +VE+
Sbjct: 518 ALIDGHSKDGKVDIALSLLKRMEEMGCNPNVES 550
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 77/179 (43%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI + + LL M++ GCEP TYN ++ K G+ A +
Sbjct: 443 VVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQ 502
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM+ +P+ ++Y I + GK D+A + +M + G P + ++ A I G
Sbjct: 503 EMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKEN 562
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
R+ +A K ++ + + Y+ L +N A + +M K PN+ Y
Sbjct: 563 RFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTY 621
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 80/176 (45%), Gaps = 4/176 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ LI +C+ +G D M ++GCEP TY+ ++ LC+ G+ +A +L+++M
Sbjct: 621 YSSLIYGLCQ----EGKADEAERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMK 676
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R PD Y ++ C+ + D A F+ + +G Q L+ + A I + E
Sbjct: 677 ERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVE 736
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+A +K ++ +++++L K + +L M PN+ Y
Sbjct: 737 EAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTY 792
>gi|168028441|ref|XP_001766736.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681945|gb|EDQ68367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 560
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 83/182 (45%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
+ V Y +I M R +F+ LL EMR+ GCEP +TYN ++ + +A
Sbjct: 64 KHDVCTYTTMIGIMGRARNFEACSRLLQEMRREGCEPCVVTYNRLIHAYGRANFLGEAMR 123
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+ +M C PD +TY + + G D A + + +M + G QP T++ I
Sbjct: 124 IFYQMQEEGCSPDRVTYCTLVDLHSKAGFHDNAMDMYQKMQQAGFQPDTFTYSVIIHCLG 183
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
+ +A K ++ + S + Y+++ L K+ N VMA + ++M G P+
Sbjct: 184 KAGKVSEALKLFEEMVERGFAPSLVTYNIIIDLQAKSGNYVMAMKLYNDMQDAGFHPDRV 243
Query: 473 VY 474
Y
Sbjct: 244 TY 245
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 82/384 (21%), Positives = 152/384 (39%), Gaps = 30/384 (7%)
Query: 133 VSEIIELLRSGDSETESKLLSMSVSLSNASVIEILRVLNSEKVS--ALCFLKYMREIMPE 190
V + +LR + ++ L+++S S I VL +K S AL F + +E E
Sbjct: 5 VDHVCNILRQLNWRPDT-LVALSRVNRTLSAFHINEVLKHQKESGLALKFFDWAKE--QE 61
Query: 191 FYKNSDICS--LVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKK 248
YK+ D+C+ +I GR ++E +LL + + G P +++ L
Sbjct: 62 GYKH-DVCTYTTMIGIMGRARNFEACSRLLQEM---------RREGCEPCVVTYNRLIHA 111
Query: 249 --------GIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTER-----K 295
R+ + + G S L+++ S G ++ A + +K ++
Sbjct: 112 YGRANFLGEAMRIFYQMQEEGCSPDRVTYCTLVDLHSKAGFHDNAMDMYQKMQQAGFQPD 171
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
Y+++I + + L EM + G P +TYN ++ + K+G A +L
Sbjct: 172 TFTYSVIIHCLGKAGKVSEALKLFEEMVERGFAPSLVTYNIIIDLQAKSGNYVMAMKLYN 231
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M HPD +TY I + ++G A FN+M + G P + + +
Sbjct: 232 DMQDAGFHPDRVTYSIMMEVLGQIGHLQEAELMFNEMEQAGWVPDAPIYGVMVDMWGKAR 291
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A ++ D + + + + L + + +A V+ M GL P + +
Sbjct: 292 NAERALEWYQKMLDSGLTPNVQISNSLLGSYLRMQQFDLAFGVIETMKAWGLVPTLQTHT 351
Query: 476 RVLKHLHTSHQEHMAKCLSSRYSS 499
+L S Q H L R S
Sbjct: 352 ILLSSCTASAQHHQVVNLMHRSSE 375
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 87/182 (47%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N L+ ++ + +G R+L +M G +P LT+N ++ +L K G+ +A +L ++
Sbjct: 167 NTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQ 226
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
+ PD TY I+ CR D+AF F++MVK G P T++ I G R ++
Sbjct: 227 YDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDE 286
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
A + +K + Y+L + + A +++ M K G RPNV Y ++
Sbjct: 287 ALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALIS 346
Query: 480 HL 481
L
Sbjct: 347 GL 348
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 5/156 (3%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI+ S G ++A ++K+ E V YN +I + + F + +M +
Sbjct: 518 ALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQ 577
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P +TY ++ LC+NG+ A ++ +M R C P+ TY I C+ GK D A
Sbjct: 578 GLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA 637
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
+M ++GL P T + I G+ + R + A+
Sbjct: 638 EILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAF 673
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 106/256 (41%), Gaps = 17/256 (6%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERKVSY-----YNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI V G + A + E S YN +IK +C D + L +M ++
Sbjct: 378 ALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKM 437
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P +TYN ++ G +A LL+ M C PD TY + + GK + A
Sbjct: 438 GPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESA 497
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
+F +MV+ GL P ++ A I G+ + + A + + + + Y+ + +
Sbjct: 498 SFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVING 557
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL----------HTSHQEHMAKCLSS 495
K N A+ + +M++ GL PNV Y ++ L H KCL +
Sbjct: 558 LSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPN 617
Query: 496 --RYSSLSLGSSVEAR 509
YSSL G E +
Sbjct: 618 LYTYSSLIYGLCQEGK 633
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 77/180 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ LI +C D+L EM + G EP TY + LC + +A EL+ M
Sbjct: 271 YSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMK 330
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R C P+ TY I R+GK +VA +++M+K GL P T+ A I + R+
Sbjct: 331 KRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFS 390
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A K ++ Y+ + + A + +M+K G P V Y ++
Sbjct: 391 TALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLI 450
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 91/219 (41%), Gaps = 2/219 (0%)
Query: 263 SCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
+ L+SG+ L ++ +GLY K + + YN LI E+C F + M
Sbjct: 342 TALISGLSRLGKLEVAIGLYH--KMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWM 399
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
G T TYN ++ LC G A L E+ML P +TY I G
Sbjct: 400 EGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNV 459
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
+ A + M + G +P T+ + G+ + + E A Y + + + + Y+ L
Sbjct: 460 NNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTAL 519
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
H K+ +A ++L M + G PNV Y V+ L
Sbjct: 520 IDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGL 558
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 84/213 (39%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y LI + R + L +M + G P T+TYN ++ LC G+ + A ++
Sbjct: 338 VQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFH 397
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M G + TY I C G + A F +M+K G P + T+ I GY
Sbjct: 398 WMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKG 457
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+A + + L + Y+ L S K A EM++ GL PN Y
Sbjct: 458 NVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYT 517
Query: 476 RVLKHLHTSHQEHMAKCLSSRYSSLSLGSSVEA 508
++ + +A L R + +VE+
Sbjct: 518 ALIDGHSKDGKVDIALSLLKRMEEMGCNPNVES 550
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y LI +CR + + +M + C P TY+ ++ LC+ G+ +A LL+
Sbjct: 583 VITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLK 642
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
EM + PD +T+ I +G+ D AF +MV G +P T++ +KG
Sbjct: 643 EMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKG 697
>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
Length = 604
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 78/175 (44%), Gaps = 6/175 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNILI CR+ +LL EM++VG P TYN +L CK G A ELL +M+
Sbjct: 391 YNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMI 450
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C P IT+ + C+VGK D A M + G+ P + I F+ R +
Sbjct: 451 DDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLID--FLCKRGD 508
Query: 419 DAYKYVVLSADKYKS---SSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
+ K KS + +LL L DK N P A ++ +M + P+
Sbjct: 509 VDLAIELFDEMKEKSVPANVTTFNALLKGLRDK-NMPEKAFELMDQMREERCFPD 562
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L EM + I+ V YN L+ C+ DF +LL +M GC+P +T+ ++
Sbjct: 411 LQEMKEVGIRP---DVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHG 467
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
CK G+ +A +L M HP+ + Y I + C+ G D+A F++M ++ +
Sbjct: 468 YCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPAN 527
Query: 401 LATHAAFIKG 410
+ T A +KG
Sbjct: 528 VTTFNALLKG 537
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M++ G + T YN ++ C+ + +A ELL+EM PD TY + SC+ G
Sbjct: 379 MKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGD 438
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
F +M+ G QP + T + GY + ++A + + + +N++Y+
Sbjct: 439 FAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNT 498
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
L K + +A + EM + + NV+ + +LK L + A
Sbjct: 499 LIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKA 547
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 74/185 (40%), Gaps = 6/185 (3%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEM--RQVGCEPITLTYNYVLGVLCKNGQDADACEL 353
V Y IL+ +C+ +L M + + P +T N V+ LCK+G+ +A
Sbjct: 172 VVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAF 231
Query: 354 LEEMLG--RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
+E+ + C P+ +TY I CRVG +A+ +M G+ + T + G
Sbjct: 232 VEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGL 291
Query: 412 FIFYRYEDAYKYVVLSADKYKSSSN--MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
R A ++ + + YS L NN MA + E M G P
Sbjct: 292 CRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSP 351
Query: 470 NVSVY 474
+ +Y
Sbjct: 352 DAIMY 356
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C+R D +L EM++ T+N +L L A EL+++M
Sbjct: 496 YNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMR 555
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQ 391
C PD +T ++ + + +G+ D F Q
Sbjct: 556 EERCFPDYVTVDVLMEWLPVIGETDRLKRFMQQ 588
>gi|410109889|gb|AFV61024.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
camara]
Length = 431
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ G L EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 212 VYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 271
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G A + ++M +GL+P T+ I G
Sbjct: 272 QMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEG 331
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ A+++ + ++ Y+ L S + V A+ +L EM+ GL+P+ Y
Sbjct: 332 DLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYT 391
Query: 476 RVL 478
++
Sbjct: 392 MIV 394
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 14/188 (7%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ C+ D + + + + + G P ++YN ++ + G + L M
Sbjct: 144 FFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAM 203
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
L PD TY + I C+ K D A F++M+ +GL P T I G+ R
Sbjct: 204 LASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGR- 262
Query: 418 EDAYKYVVLSADKYKS--SSNML-----YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
V L+ + YK S ++L Y+ L K + A +++ EM GL+P+
Sbjct: 263 ------VDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPD 316
Query: 471 VSVYRRVL 478
Y ++
Sbjct: 317 KFTYTTLI 324
>gi|255660938|gb|ACU25638.1| pentatricopeptide repeat-containing protein [Citharexylum
montevidense]
Length = 481
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 64/132 (48%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
ER + Y++L K + RR + + +M G EP T+N ++ +G+ A
Sbjct: 112 ERTIKSYDVLFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNIMIWGFFLSGKVETAXR 171
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
E+M R+ PD ITY I RV K + A +F +M R ++P + TH IKGY
Sbjct: 172 FFEDMKSRDITPDVITYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTHTTLIKGYV 231
Query: 413 IFYRYEDAYKYV 424
R +DA + V
Sbjct: 232 AVDRVDDALRLV 243
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 70/164 (42%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L +M ++G E +Y+ + V+ + G+ A +ML P T+ I I
Sbjct: 102 LFHKMEELGVERTIKSYDVLFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNIMIWGFF 161
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
GK + A FF M R + P + T+ I GY+ + E+A KY V + + +
Sbjct: 162 LSGKVETAXRFFEDMKSRDITPDVITYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVV 221
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
++ L + + A ++ EM G++PN Y L L
Sbjct: 222 THTTLIKGYVAVDRVDDALRLVEEMKGFGIKPNAITYSTXLPGL 265
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 88/207 (42%), Gaps = 11/207 (5%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L EM I T+ S + LI C+ + D+L M ++ Y ++
Sbjct: 278 LKEMVDKYIAPTDN--SIFLRLISGQCKAGNLDAAADVLKAMIRLSVPTEAGHYGVLIEN 335
Query: 341 LCKNGQDADACELLEEMLGRNC--------HPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
CK Q A LL++++ ++ H + Y I Y C G+ A Q+
Sbjct: 336 YCKAVQYDKAISLLDKLIEKDIILRPQSTSHMEPSAYNPLIEYLCNNGQTAKAETLVRQL 395
Query: 393 VKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNP 452
+K G+Q A + I+G+ + A++ + + + S Y+ L + K + P
Sbjct: 396 MKLGVQDATALN-TLIRGHSQEGSPDSAFELLKIMLRRKXDSEKSAYNSLVQCYLKKSEP 454
Query: 453 VMAKNVLSEMMKNGLRPNVSVYRRVLK 479
AK L M++NG P+ S++R V++
Sbjct: 455 ADAKTALDSMIENGHLPDSSLFRLVME 481
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 83/210 (39%), Gaps = 13/210 (6%)
Query: 268 GVRALIEMFSVL-------GLYEMAKYVIKK-----TERKVSYYNILIKEMCRRCDFKGP 315
GV I+ + VL G Y MAK K E +NI+I +
Sbjct: 110 GVERTIKSYDVLFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNIMIWGFFLSGKVETA 169
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
+M+ P +TYN ++ + + +A + EM GRN P +T+ I
Sbjct: 170 XRFFEDMKSRDITPDVITYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTHTTLIKG 229
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKS-S 434
V + D A +M G++P T++ + G + +A + DKY + +
Sbjct: 230 YVAVDRVDDALRLVEEMKGFGIKPNAITYSTXLPGLCNAEKMSEARSXLKEMVDKYIAPT 289
Query: 435 SNMLYSLLASLHDKNNNPVMAKNVLSEMMK 464
N ++ L S K N A +VL M++
Sbjct: 290 DNSIFLRLISGQCKAGNLDAAADVLKAMIR 319
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 69/149 (46%)
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P TYN ++ LC G +A +L +M G C P+A+TY + CR G+ D A
Sbjct: 152 GVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRA 211
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
+ M + GL+P L T + + G R EDA K + + + Y+ L
Sbjct: 212 ERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGG 271
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ K A +V +EM + G+ P+V +
Sbjct: 272 YCKVGCSHEALSVFAEMTRKGIMPDVVTF 300
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 90/226 (39%), Gaps = 40/226 (17%)
Query: 271 ALIEMFSVLGLYEMAKYVIK-----KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI+ F G + A ++ + + V YN LI C R+L+ EM
Sbjct: 337 ALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAK 396
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G +P +TY+ +L CKNG A +L ++ML PDAITY I C + A
Sbjct: 397 GVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDA 456
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
F M+ GLQP T+ + I G+ E A SL
Sbjct: 457 HVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERAL----------------------SL 494
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
HD EM+K G+ P+V Y ++ L S + A+
Sbjct: 495 HD-------------EMVKAGVLPDVVTYSVLINGLSKSARTKEAQ 527
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YNIL++ +C R K +L +MR GC+P +TYN ++ C+ G+ A L++
Sbjct: 157 VYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVD 216
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M P+ +T+ + C+ G+ + A F++MVK GL P ++ + GY
Sbjct: 217 MMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVG 276
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
+A K + ++ L + K N A ++ EM + GL+ N
Sbjct: 277 CSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMN 331
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 78/157 (49%), Gaps = 5/157 (3%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI + ++G + A+ ++++ E K V Y+ ++ C+ D L +M +
Sbjct: 372 ALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLEN 431
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P +TY+ ++ VLC+ + DA L + M+ PD +TY I C+ G + A
Sbjct: 432 GVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERA 491
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
+ ++MVK G+ P + T++ I G R ++A +
Sbjct: 492 LSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQR 528
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N ++ +C+ + R + EM + G P ++YN ++G CK G +A + EM
Sbjct: 230 FNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMT 289
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD +T+ I C+ G + A +M +RGLQ T A I G+ +
Sbjct: 290 RKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLD 349
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA V S + Y+ L + + A+ ++ EM G++P+V Y +L
Sbjct: 350 DALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTIL 409
Query: 479 KHLHTSHQEHMA 490
+ H A
Sbjct: 410 SAYCKNGDTHSA 421
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 80/198 (40%), Gaps = 31/198 (15%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNY------------VLGVL-- 341
V Y++LI + + K + LL ++ P + Y+ VL +L
Sbjct: 507 VVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKG 566
Query: 342 -CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
C G +A ++ + +L RN + D Y + I CR G A +F QM++ G P
Sbjct: 567 FCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPN 626
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL--------LASLHDKNNNP 452
+ + I+G F K +V+ AD+ SL L L+ K N
Sbjct: 627 STSTISLIRGLF--------EKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNV 678
Query: 453 VMAKNVLSEMMKNGLRPN 470
+VL M ++GL P+
Sbjct: 679 DAVLDVLHGMARDGLLPS 696
>gi|53749325|gb|AAU90184.1| unkonwn protein [Oryza sativa Japonica Group]
gi|55168288|gb|AAV44154.1| unknown protein [Oryza sativa Japonica Group]
Length = 395
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 64/123 (52%), Gaps = 3/123 (2%)
Query: 278 VLGLYEMAKYVIKKTERKVSYYNILIKEMCR-RCDFKGPRDLLVEMRQVGCEPITLTYNY 336
V+ L E K K R+V +N +I C D L +M++ GC+P +++YN
Sbjct: 210 VVSLLEEMKEKGIKVGREV--HNSMIAGFCEDEGDLDAAFAALDDMQKGGCKPDSVSYNT 267
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
++G LCK G+ DA EL+E+M R C PD +TY C G F A FN+MV +G
Sbjct: 268 LVGGLCKMGRWRDASELVEDMPRRGCRPDVVTYRRLFDGICDAGGFSEARRVFNEMVFKG 327
Query: 397 LQP 399
P
Sbjct: 328 FAP 330
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADAC-ELLEEMLGRNCHPDAITYEIFIVYS 376
LL EM++ G + +N ++ C++ D DA L++M C PD+++Y +
Sbjct: 213 LLEEMKEKGIKVGREVHNSMIAGFCEDEGDLDAAFAALDDMQKGGCKPDSVSYNTLVGGL 272
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
C++G++ A M +RG +P + T+ G
Sbjct: 273 CKMGRWRDASELVEDMPRRGCRPDVVTYRRLFDG 306
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Query: 317 DLLVEMRQVGCEPITLTYNYVL-GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
+LL E R G P TYN ++ + +G +AC L +EML R P +T+ +
Sbjct: 69 ELLSECRGSGIHPDACTYNILMRAAVADSGSVDNACLLFDEMLQRGIAPTVVTFGTLVTA 128
Query: 376 SCRVGKFDVAFNFFNQM-VKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
C G+ + AF M ++ ++P +A+ +K + +DA++
Sbjct: 129 FCEAGRLEEAFKVKEVMSLQYNIRPNAHVYASLMKALCEKGKVDDAHR 176
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 65/164 (39%), Gaps = 10/164 (6%)
Query: 324 QVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHP--DAITYEIFIVYSCRVGK 381
Q P Y ++ LC+ G+ DA L EEM+ N P D+ Y R+GK
Sbjct: 148 QYNIRPNAHVYASLMKALCEKGKVDDAHRLKEEMVS-NSEPLVDSGAYATLARALFRLGK 206
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS----NM 437
+ +M ++G++ H + I G F E + D + ++
Sbjct: 207 KGEVVSLLEEMKEKGIKVGREVHNSMIAG---FCEDEGDLDAAFAALDDMQKGGCKPDSV 263
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y+ L K A ++ +M + G RP+V YRR+ +
Sbjct: 264 SYNTLVGGLCKMGRWRDASELVEDMPRRGCRPDVVTYRRLFDGI 307
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 39/82 (47%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ +C+ ++ +L+ +M + GC P +TY + +C G ++A + EM+
Sbjct: 265 YNTLVGGLCKMGRWRDASELVEDMPRRGCRPDVVTYRRLFDGICDAGGFSEARRVFNEMV 324
Query: 359 GRNCHPDAITYEIFIVYSCRVG 380
+ P F+ + R G
Sbjct: 325 FKGFAPSKDGVRKFVAWIEREG 346
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 84/203 (41%)
Query: 279 LGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
L L + + ++ V Y ILI+ LL EM G P TYN ++
Sbjct: 200 LALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAII 259
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
+CK G A EL+ + + C PD I+Y I + GK+D +M RG +
Sbjct: 260 RGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCE 319
Query: 399 PRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNV 458
P T++ I F R ++A + + +K + Y L S K +A +
Sbjct: 320 PNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGI 379
Query: 459 LSEMMKNGLRPNVSVYRRVLKHL 481
+ M+ NG P++ Y +L L
Sbjct: 380 MDYMISNGCLPDIVNYNTILAAL 402
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 82/190 (43%)
Query: 292 TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADAC 351
TE V YN +I C+ + +L M+ G P +TYN ++G LC + A
Sbjct: 143 TEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 202
Query: 352 ELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
+L+++L NC P ITY I I + G + A +M+ RGL P + T+ A I+G
Sbjct: 203 TVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 262
Query: 412 FIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
E A + + K + Y++L + +++EM G PN
Sbjct: 263 CKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 322
Query: 472 SVYRRVLKHL 481
Y ++ L
Sbjct: 323 VTYSILISSL 332
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 113/256 (44%), Gaps = 17/256 (6%)
Query: 238 VLISSKALTKKGIWRVVEVLNQVGGSCLVSGV---RALIEMFSVLGLYEMAKYVI----- 289
+LI + + + GI +++L ++ L+ + A+I G+ E A +I
Sbjct: 222 ILIEA-TIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTS 280
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K E V YNIL++ + + L+ EM GCEP +TY+ ++ LC+ G+ +
Sbjct: 281 KGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDE 340
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH----A 405
A +L+ M+ + PD +Y+ I C+ G+ D+A + M+ G P + + A
Sbjct: 341 AISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILA 400
Query: 406 AFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKN 465
A K E K + SS N + S L S D++ A ++ M+
Sbjct: 401 ALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSR----ALGMVPAMISK 456
Query: 466 GLRPNVSVYRRVLKHL 481
G+ P+ Y ++ L
Sbjct: 457 GIDPDEITYNSLISCL 472
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 70/144 (48%), Gaps = 7/144 (4%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
VS YN +I + D ++ M G +P +TYN ++ LC++G +A LL+
Sbjct: 427 VSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLD 486
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY-FIF 414
+M P I+Y I ++ C+V + D A F +M+++G +P T+ I+G F
Sbjct: 487 DMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAG 546
Query: 415 YRYE------DAYKYVVLSADKYK 432
+R E + V+S D +K
Sbjct: 547 WRTEAMELANSLFSRDVISQDSFK 570
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 57/122 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++ +C+ + ++ ++R +GC P +YN ++ L G + A ++ M+
Sbjct: 395 YNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMI 454
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD ITY I CR G + A + M + G +P + ++ + G R +
Sbjct: 455 SKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRID 514
Query: 419 DA 420
DA
Sbjct: 515 DA 516
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 72/181 (39%), Gaps = 1/181 (0%)
Query: 319 LVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCR 378
++E+ + EP YN V+ CK Q A ++L M R PD +TY I I C
Sbjct: 135 VMEILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCN 194
Query: 379 VGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML 438
K +A +Q++ P + T+ I+ + +A K + +
Sbjct: 195 RRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYT 254
Query: 439 YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK-HLHTSHQEHMAKCLSSRY 497
Y+ + K A +++ + G P+V Y +L+ L+ + K ++ +
Sbjct: 255 YNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMF 314
Query: 498 S 498
S
Sbjct: 315 S 315
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
SC+ GKF+ + F +V +G P + IKG+F F E A + V+ + +
Sbjct: 88 SCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASR-VMEILESHTEPD 146
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y+ + S K N A VL+ M G P++ Y ++ L
Sbjct: 147 VFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSL 192
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 104/235 (44%), Gaps = 5/235 (2%)
Query: 249 GIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTE----RKVSY-YNILI 303
G R+ E + + G C V LI F G + A I++ R + YN L+
Sbjct: 256 GALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLV 315
Query: 304 KEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH 363
+C+ K +++ M G +P TYN ++ LCK G+ +A ++L++M+ R+C
Sbjct: 316 NGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCS 375
Query: 364 PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY 423
P+A+TY I C+ + D A + +G+ P + T + I+G + ++ A
Sbjct: 376 PNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDL 435
Query: 424 VVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
K Y++L + A N+L EM NG NV +Y ++
Sbjct: 436 FEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLI 490
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 108/276 (39%), Gaps = 44/276 (15%)
Query: 242 SKALTKKGIWRVVEVLNQ-VGGSCLVSGVRALIEMFSVLG-------------------- 280
++ LT KGI V N + G CL S ++ +++F +
Sbjct: 401 ARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCS 460
Query: 281 --LYEMAKYVIKKTE-----RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLT 333
E A ++K+ E R V YN LI C+ + ++ EM G ++T
Sbjct: 461 SRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVT 520
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
YN ++ LCK+ + DA +L+++M+ PD TY + + C+ G A + M
Sbjct: 521 YNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMT 580
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDA--------YKYVVLSADKYKSSSNMLYSLLASL 445
G P + T+A I G R + A K +VL+ Y L+
Sbjct: 581 SSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALF------ 634
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K N A + EM+ P+ Y+ V + L
Sbjct: 635 --KRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGL 668
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 91/217 (41%), Gaps = 2/217 (0%)
Query: 265 LVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQ 324
L+SG+ L E+ + + + + V + YN +I +C+ ++ +
Sbjct: 349 LISGLCKLGEIEEAVKILD--QMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTS 406
Query: 325 VGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
G P T+N ++ LC + A +L EEM G+ C PD TY + I C K +
Sbjct: 407 KGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEE 466
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLAS 444
A N +M G + + I G+ R E+A + + S ++ Y+ L
Sbjct: 467 ALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLID 526
Query: 445 LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K+ A ++ +M+ GLRP+ Y +L H
Sbjct: 527 GLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHF 563
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 85/397 (21%), Positives = 156/397 (39%), Gaps = 48/397 (12%)
Query: 126 PYATPKQVSEIIELLRSGDSETESKLLSMSVSLSN----ASVIE-ILRVLNSEKVSALCF 180
P TPKQ+ E L R D ++ + + N +SV E ILR K+
Sbjct: 60 PDFTPKQLIET--LRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILR-----KLGKAGS 112
Query: 181 LKYMREIMPEFYK-----NSDICSLVIDNCGRLDDYETMRQLLN----------DFNVYQ 225
+YMR ++ E + I + +++ G+ + Y+ + ++ D Y
Sbjct: 113 FEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYN 172
Query: 226 VCLNEKAFGFLPVLISSK--ALTKKGIWRVVEVLN-QVGGSCLVSGVRALIEMFSVLGLY 282
V LN L+ S ++ ++ I V N + C VR ++L +
Sbjct: 173 VLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRP-----AILMME 227
Query: 283 EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLC 342
EM Y + E + + +++ + G + +M + GC +T N ++ C
Sbjct: 228 EMPSYGLSPDE---TTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFC 284
Query: 343 KNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLA 402
K G+ A ++E + PD TY + C++G A + M+ GL P +
Sbjct: 285 KQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIY 344
Query: 403 THAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM 462
T+ + I G E+A K + + S + + Y+ + S K N A + +
Sbjct: 345 TYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLL 404
Query: 463 MKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSS 499
G+ P+V + +++ L CLSS + S
Sbjct: 405 TSKGILPDVCTFNSLIQGL----------CLSSNHKS 431
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 68/179 (37%), Gaps = 36/179 (20%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQ------------ 346
YN L+ C+ D K D++ M GC P +TY ++ LCK G+
Sbjct: 556 YNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQ 615
Query: 347 -----------------------DADACELLEEMLGRNCHPDAITYEIFIVYSCR-VGKF 382
+A L EML ++ PDAITY+I C G
Sbjct: 616 MKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPI 675
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
A +F +M++RG P ++ +G + K V + +K K S + ++
Sbjct: 676 GEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSMDDTLVKLVDMIMEKAKFSEREISTI 734
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 91/203 (44%), Gaps = 5/203 (2%)
Query: 276 FSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYN 335
FSVL AK + + ++ +N LI+ +C L +M G +P +TY
Sbjct: 114 FSVL-----AKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYG 168
Query: 336 YVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR 395
++ LCK G + A LL M NC PD + Y I C+ + AFN F++M+ +
Sbjct: 169 TLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQ 228
Query: 396 GLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMA 455
G+ P + T+ + I ++ + + + +++S + K + A
Sbjct: 229 GISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEA 288
Query: 456 KNVLSEMMKNGLRPNVSVYRRVL 478
+V+ M+K G+ PNV Y ++
Sbjct: 289 HDVVDMMIKRGVEPNVVTYNALM 311
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 61/122 (50%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C C++K LL EM P + ++ V+ LCK G+ +A ++++ M+
Sbjct: 237 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMI 296
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R P+ +TY + C + D A F+ MV +G P + +++ I GY R E
Sbjct: 297 KRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIE 356
Query: 419 DA 420
A
Sbjct: 357 KA 358
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 94/220 (42%), Gaps = 5/220 (2%)
Query: 283 EMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYV 337
E A Y+ ++ RK Y+ L+ +C + L EM G P ++Y +
Sbjct: 356 EKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCIL 415
Query: 338 LGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
L LCKN + +A LL+ + G N PD Y I I CR G+ + A + F+ + +GL
Sbjct: 416 LDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGL 475
Query: 398 QPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKN 457
P + T+ I G +A K K S + Y+L+ +NN +
Sbjct: 476 HPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQ 535
Query: 458 VLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRY 497
+L EM+ G +VS +++ L + K + S +
Sbjct: 536 LLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEF 575
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 80/189 (42%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
+ V Y +I +C+ +L EM G P TYN ++ LC +
Sbjct: 196 QPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTA 255
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
LL EM+ P+ + + + C+ GK A + + M+KRG++P + T+ A + G+
Sbjct: 256 LLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHC 315
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
+ ++A K K + + YS L + + K A + EM + L PN
Sbjct: 316 LRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTV 375
Query: 473 VYRRVLKHL 481
Y ++ L
Sbjct: 376 TYSTLMHGL 384
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 96/221 (43%)
Query: 286 KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNG 345
+ V K V ++ ++ +C+ D++ M + G EP +TYN ++ C
Sbjct: 259 EMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRS 318
Query: 346 QDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
+ +A ++ + M+ + PD ++Y I C++ + + A F +M ++ L P T++
Sbjct: 319 EMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYS 378
Query: 406 AFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKN 465
+ G R +DA + + + Y +L KN A +L + +
Sbjct: 379 TLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGS 438
Query: 466 GLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
+ P++ +Y V+ + + + A+ L S SS L +V
Sbjct: 439 NMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNV 479
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 64/161 (39%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M G P T N ++ C + A +L ++L P+ T+ I C G
Sbjct: 84 QMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEG 143
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
K + F++M+ G QP + T+ I G A + + ++Y+
Sbjct: 144 KIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYT 203
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ K+ A N+ SEM+ G+ P++ Y ++ L
Sbjct: 204 SIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHAL 244
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 81/183 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +IK C D K ++ M Q G +TYN ++ C +G A +L+ M
Sbjct: 428 YNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMR 487
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C PD +Y I C++ K + AF FN+MV GL P T+ A I GY + +
Sbjct: 488 DGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLD 547
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + + Y++L K NN A+ + M++ G+ PNV Y ++
Sbjct: 548 TATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMI 607
Query: 479 KHL 481
L
Sbjct: 608 DGL 610
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 68/129 (52%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN+LI + ++ +F G +L M + G P +TY ++ LCKNG + A E+
Sbjct: 565 VQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFN 624
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M+ + C P+ +TY I + GK + A N F ++ + GL P T+ I+ Y +
Sbjct: 625 KMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSG 684
Query: 416 RYEDAYKYV 424
+ E A+ ++
Sbjct: 685 KVEHAFNFL 693
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 78/187 (41%), Gaps = 20/187 (10%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M G +P L YN V+ LCK+G ADA +++++ PD TY I+ CR
Sbjct: 206 MLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHD 265
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
D A FNQM K G +P T++ I G R +A+ + +L+ +
Sbjct: 266 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLI---------REMILHGI 316
Query: 442 LASLHDKNNNPVM----------AKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
L + H P++ A + +M G PNV Y ++ L S +A
Sbjct: 317 LPTAH-TCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAI 375
Query: 492 CLSSRYS 498
L R S
Sbjct: 376 GLFHRMS 382
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 92/218 (42%), Gaps = 4/218 (1%)
Query: 265 LVSGVRALIEMFSVLGLY-EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMR 323
L+ G + +M S GL+ EM + E Y LI C+ LL M+
Sbjct: 501 LICGFCKISKMESAFGLFNEMVDDGLCPNEVT---YTALIDGYCKDEKLDTATSLLEHMK 557
Query: 324 QVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
+ GC P TYN ++ L K + A EL + M+ P+ +TY I C+ G
Sbjct: 558 RSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTS 617
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
+A FN+M+++G P L T+++ I+ + E+A + Y +
Sbjct: 618 LALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMI 677
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + A N L M+K G +P + Y ++K L
Sbjct: 678 EAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 715
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 90/218 (41%), Gaps = 39/218 (17%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +I CR+ D + +M + GCEP T+TY+ ++ LC +G+ +A +L+ EM+
Sbjct: 253 YTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMI 312
Query: 359 -----------------------------------GRNCHPDAITYEIFIVYSCRVGKFD 383
+ C P+ TY I C G
Sbjct: 313 LHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLK 372
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLS-ADKYKSSSNML-YSL 441
VA F++M + G+ P T+ A I + Y +VVL+ + S N++ Y+
Sbjct: 373 VAIGLFHRMSRDGVFPNTVTYNALIN--ILVENRRIKYAFVVLNLMGRNGCSPNIVTYNE 430
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
+ + +P A V++ M++ G N+ Y ++K
Sbjct: 431 MIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIK 468
>gi|410109891|gb|AFV61025.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
cujabensis]
Length = 409
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 85/183 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ G +L EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 208 VYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYK 267
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G A + ++M +GL+P T+ I G
Sbjct: 268 QMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSXKGLKPDKFTYTTLIDGCCKEG 327
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ A+ + + ++ Y+ L S + V A+ +L EM+ GL P+ Y
Sbjct: 328 DLDTAFXHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLXPDAGTYT 387
Query: 476 RVL 478
++
Sbjct: 388 MII 390
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 14/188 (7%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ C+ D + + + + + G P ++YN ++ + G + L M
Sbjct: 140 FFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAM 199
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
L PD TY + I C+ K D A F++M+ +GL P T I G+ R
Sbjct: 200 LASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXVTFTTLIDGHCKNGR- 258
Query: 418 EDAYKYVVLSADKYKS--SSNML-----YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
V L+ + YK S ++L Y+ L K + A +++ EM GL+P+
Sbjct: 259 ------VDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSXKGLKPD 312
Query: 471 VSVYRRVL 478
Y ++
Sbjct: 313 KFTYTTLI 320
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 7/224 (3%)
Query: 270 RALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEP 329
R + E F++ ++ + K + YN LI +C C++K LL EM P
Sbjct: 304 RQVTEAFNLF-----SEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMP 358
Query: 330 ITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFF 389
+ ++ V+ LCK G A A ++++ M+ R PD +TY + C + D A F
Sbjct: 359 NVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVF 418
Query: 390 NQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKN 449
+ MV +G P + ++ I GY R + A + + + + + Y+ L
Sbjct: 419 DTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHV 478
Query: 450 NNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
A + EM+ +G P++ YR +L +L +H H+A+ +
Sbjct: 479 GRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNH--HLAEAM 520
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 2/217 (0%)
Query: 265 LVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQ 324
L++G + M +GL E + ++ YN LI +C + L EM
Sbjct: 436 LINGYCQIQRMDKAMGLLE--QMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVA 493
Query: 325 VGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
G P +TY +L LCKN A+A LL+ + G N D + Y I I CR G+ +
Sbjct: 494 SGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEA 553
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLAS 444
A + F+ + +GLQP + T+ I G ++A K + S +Y+ +
Sbjct: 554 ARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIR 613
Query: 445 LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
++N A +L EM+ G +VS +++ L
Sbjct: 614 GFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEML 650
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 94/210 (44%), Gaps = 5/210 (2%)
Query: 269 VRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCE 328
+R L FSVL AK + + + +N LI+ +C L + G +
Sbjct: 198 LRRLGYAFSVL-----AKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQ 252
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P +TY ++ LCK G + A LL M+ +NC P+ I Y I C+ + AFN
Sbjct: 253 PDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNL 312
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
F++M+ +G+ P + T+ + I ++ + + + +++S + K
Sbjct: 313 FSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCK 372
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A +V+ M+K G+ P+V Y ++
Sbjct: 373 EGMIAIAHDVVDMMIKRGVEPDVVTYTALM 402
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 92/228 (40%), Gaps = 9/228 (3%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
G C V A I + + V K V YN +I +C+ +L E
Sbjct: 264 GLCKVGNTSAAIRLLRSM--------VQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSE 315
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M G P TYN ++ LC + LL EM+ P+ + + + C+ G
Sbjct: 316 MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGM 375
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
+A + + M+KRG++P + T+ A + G+ + ++A K K + Y++
Sbjct: 376 IAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNI 435
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL-HTSHQEH 488
L + + + A +L +M GL + Y ++ L H +H
Sbjct: 436 LINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQH 483
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 4/184 (2%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
NILI C +L ++ ++GC+P T+N ++ LC G+ +A L ++ +G
Sbjct: 189 NILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIG 248
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
PD +TY + C+VG A MV++ +P + + I + +
Sbjct: 249 EGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTE 308
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNN--NPVMAKNVLSEMMKNGLRPNVSVYRRV 477
A+ + S K S +++ + +H N +L+EM+ + + PNV V+ V
Sbjct: 309 AFN--LFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTV 366
Query: 478 LKHL 481
+ L
Sbjct: 367 VDAL 370
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 67/164 (40%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L +M G P T N ++ C + A +L ++L C PD T+ I C
Sbjct: 172 LSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLC 231
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
GK A + F++ + G QP + T+ + G A + + K + +
Sbjct: 232 VEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVI 291
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y+ + K+ A N+ SEM+ G+ P++ Y ++ L
Sbjct: 292 AYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHAL 335
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 61/158 (38%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P T+ + +L + K + L +M PD T I I C + + AF+
Sbjct: 148 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 207
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
+++K G QP T I+G + + +A + + + Y L + K
Sbjct: 208 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 267
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
N A +L M++ RPNV Y ++ L Q
Sbjct: 268 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQ 305
>gi|357128605|ref|XP_003565962.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Brachypodium distachyon]
Length = 431
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 8/212 (3%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
AL+ F G + A+ ++ + + YNI++K C R F G R +L EM
Sbjct: 129 ALLHCFVCNGRLDAARDLLPRAAKLGVRPNAVSYNIILKGACERDGFVGARVVLDEMLGR 188
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P +T+N ++G C+ G+ A L EEM+ R P+A+TY + + C G+ D A
Sbjct: 189 GVRPTVVTFNTLVGAACQEGELGGAERLREEMVRRGVTPNAVTYSLLMRGLCDAGRHDDA 248
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYK-SSSNMLYSLLAS 444
M +G Q + + Y D + ++ + K K + Y++L
Sbjct: 249 KKMMFDMEYQGCQTEAVNYGVLMSAYARQGNI-DGVRGLLSNMRKRKLKPDDASYNVLIK 307
Query: 445 LHDKNNNPVMAKNVLSEM-MKNGLRPNVSVYR 475
N V A L EM +K G P+ + YR
Sbjct: 308 CLCDNGRVVEAHKALVEMQVKEGTVPSAATYR 339
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 1/123 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM- 357
Y +L+ R+ + G R LL MR+ +P +YN ++ LC NG+ +A + L EM
Sbjct: 267 YGVLMSAYARQGNIDGVRGLLSNMRKRKLKPDDASYNVLIKCLCDNGRVVEAHKALVEMQ 326
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
+ P A TY + C F + N M+ G P T +KG +
Sbjct: 327 VKEGTVPSAATYRVLADGCCSAQDFGLGLRVLNAMLASGHCPLAHTFRHLVKGLSEDEKT 386
Query: 418 EDA 420
E+A
Sbjct: 387 EEA 389
>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
Length = 1114
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 144/332 (43%), Gaps = 47/332 (14%)
Query: 169 VLNSEKVSALCFLKYMREIM-PEFYKNSDICSLV--IDNCGRLDD-YETMRQLLNDFNVY 224
V N + A+CF M++++ P+F +C+L+ + G ++D Y+ + L
Sbjct: 656 VKNGQVKEAMCFFHQMKKLVYPDFVT---LCTLLPGVVKAGLIEDAYKIIANFLYS---- 708
Query: 225 QVCLNEKAFGFLPVLISSKALTKKGIWRVVE-----VLNQV---GGSCLV---------- 266
C ++ A F L+ S L + GI V V N + G S LV
Sbjct: 709 --CADQPANLFWEDLMGS-ILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHN 765
Query: 267 --SGVRALIEMFSV-LGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMR 323
SG R L E F+ LG+ + K+ YN+LI + + +D+ ++++
Sbjct: 766 NASGARMLFEKFTKDLGV-----------QPKLPTYNLLIGGLLEADMIEIAQDVFLQVK 814
Query: 324 QVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
GC P TYN++L K+G+ + E+ +EM C P+ IT+ I I + G D
Sbjct: 815 NTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVD 874
Query: 384 VAFN-FFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
A + +++ M R P T+ I G R +A + +D + +Y++L
Sbjct: 875 DALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNIL 934
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ K A + M+K G+RP++ Y
Sbjct: 935 INGFGKAGEADAACALFKRMVKEGVRPDLKTY 966
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 14/198 (7%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI + + + L M GC P YN ++ K G+ AC L + M+
Sbjct: 896 YGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMV 955
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD TY + + C VG+ D ++F ++ + GL P + + I G F+R E
Sbjct: 956 KEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLE 1015
Query: 419 DAY-------KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
+A K ++ D Y +S +L +A + ++ A + +E+ + GL PNV
Sbjct: 1016 EALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEE------AGKIYNEIQRAGLEPNV 1069
Query: 472 SVYRRVLKHLHTSHQ-EH 488
+ +++ S + EH
Sbjct: 1070 FTFNALIRGYSLSGKPEH 1087
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 68/150 (45%), Gaps = 11/150 (7%)
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
K + V YN L+ + + + +L M Q GC P T+T+N + LCKN + A
Sbjct: 570 KLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLA 629
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
++L +M+ C PD TY I + G+ A FF+QM K+ + P T + G
Sbjct: 630 LKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPG 688
Query: 411 YFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
EDAYK + +N LYS
Sbjct: 689 VVKAGLIEDAYKII----------ANFLYS 708
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 82/197 (41%), Gaps = 2/197 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y +LI +C +++ +M+ +P +TY +L N +D D+
Sbjct: 295 VVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDN-RDLDSVNQFW 353
Query: 356 EMLGRNCH-PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
+ ++ H PD +T+ I + C+ G F AF + M +G+ P L T+ I G
Sbjct: 354 SEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRV 413
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+R +DA + + Y + + K+ + V A +M G+ PN+
Sbjct: 414 HRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVAC 473
Query: 475 RRVLKHLHTSHQEHMAK 491
L L + ++ AK
Sbjct: 474 NASLYSLAKAGRDREAK 490
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 80/178 (44%)
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
+ + ++ +G P ++TYN ++ K G+ +A +LL EM+ C PD I I
Sbjct: 490 KQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINT 549
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
+ + D A+ F +M + L+P + T+ + G + ++A + K +
Sbjct: 550 LYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPN 609
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
+ ++ L KN+ +A +L +MM G P+V Y ++ L + Q A C
Sbjct: 610 TITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCF 667
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V + IL+ +C+ +F L MR G P TYN ++ L + + DA E+ +
Sbjct: 365 VVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFD 424
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M P A TY +FI Y + G A F +M +G+ P + A +
Sbjct: 425 NMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAG 484
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R +A + D ++ Y+++ + K A +LSEM++N P+V V
Sbjct: 485 RDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVN 544
Query: 476 RVLKHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
++ L+ + + A + R + L +V
Sbjct: 545 SLINTLYKADRVDEAWKMFMRMKEMKLKPTV 575
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 81/189 (42%), Gaps = 2/189 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ L+ + +R D + LL EM +G +P T+ + VL + G+ +A E+L+ M
Sbjct: 228 YSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMD 287
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C PD +TY + I C K D A F +M +P T+ + F R
Sbjct: 288 DEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLD-RFSDNRDL 346
Query: 419 DAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
D+ +K +++ +++L K N A L M G+ PN+ Y +
Sbjct: 347 DSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTL 406
Query: 478 LKHLHTSHQ 486
+ L H+
Sbjct: 407 ICGLLRVHR 415
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 2/185 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVE-MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
+NI+I + + + DL + M P TY ++ L K+G+ +A +L E M
Sbjct: 860 HNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGM 919
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
C P+ Y I I + G+ D A F +MVK G++P L T++ + + R
Sbjct: 920 SDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRV 979
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKN-GLRPNVSVYRR 476
++ Y + + + Y+L+ + K + A + +EM K+ G+ P++ Y
Sbjct: 980 DEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNS 1039
Query: 477 VLKHL 481
++ +L
Sbjct: 1040 LILNL 1044
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 140/375 (37%), Gaps = 16/375 (4%)
Query: 44 SPKPSPIPSLNSDQFQSKPTSNPSYSFISSI-GSSSFCHLTHPSCHSSQNLYFSNCNGSC 102
S KP S + S P ++ S+S+ S+ G+S+ H T + + L +G
Sbjct: 80 SSKPDLSSSEVARVLMSFPDTDSSFSYFKSVAGNSNLVHTTETCNYMLEAL---RVDGKI 136
Query: 103 RSQISKLGLLTSRCISSFAMVNGPYATPKQVSEIIELLRSGDSETESKLLSMSVSLSNAS 162
L+ R I Y T + + LR K+ L+ S
Sbjct: 137 EEMAYVFDLMQKRIIKR---DTNTYLTIFKCLSVKGGLRQAPFALR-KMREFGFVLNAYS 192
Query: 163 VIEILRVLNSEKVSALCFLKYMREIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFN 222
++ +L + Y R I+ F + S ++ G+ D E++ LL +
Sbjct: 193 YNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEME 252
Query: 223 VYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLY 282
+ N F + + + +A + +++ ++ G V LI+
Sbjct: 253 TLGLKPNVYTFT-ICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKL 311
Query: 283 EMAKYVIKKTER------KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNY 336
+ AK V K + +V+Y +L + R D EM + G P +T+
Sbjct: 312 DCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNR-DLDSVNQFWSEMEKDGHVPDVVTFTI 370
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
++ LCK G +A L+ M + P+ TY I RV + D A F+ M G
Sbjct: 371 LVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLG 430
Query: 397 LQPRLATHAAFIKGY 411
++P T+ FI Y
Sbjct: 431 VKPTAYTYIVFIDYY 445
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 77/171 (45%), Gaps = 2/171 (1%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M+ G P + N L L K G+D +A ++ + PD++TY + + +VG
Sbjct: 460 KMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVG 519
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSNMLY 439
+ D A ++MV+ +P + + I + R ++A+K ++ + K K +
Sbjct: 520 EIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYN 579
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
+LLA L KN A + M++ G PN + + L + + +A
Sbjct: 580 TLLAGLG-KNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLA 629
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 6/156 (3%)
Query: 272 LIEMFSVLGLYEMA----KYVIKKTER-KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI F G + A K ++K+ R + Y++L+ +C E+++ G
Sbjct: 934 LINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESG 993
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEML-GRNCHPDAITYEIFIVYSCRVGKFDVA 385
P + YN ++ L K + +A L EM R PD TY I+ G + A
Sbjct: 994 LNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEA 1053
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
+N++ + GL+P + T A I+GY + + E AY
Sbjct: 1054 GKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAY 1089
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 62/157 (39%), Gaps = 2/157 (1%)
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P TY+ ++ L K LL+EM P+ T+ I I R GK + A
Sbjct: 220 GFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEA 279
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSNMLYSLLAS 444
+ +M G P + T+ I + + A + + + ++K +LL
Sbjct: 280 YEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDR 339
Query: 445 LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
D N + SEM K+G P+V + ++ L
Sbjct: 340 FSD-NRDLDSVNQFWSEMEKDGHVPDVVTFTILVDAL 375
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 99/225 (44%), Gaps = 18/225 (8%)
Query: 258 NQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDF 312
N V + LV+G+ EM E AK +I+ R V Y+ LI+ C +
Sbjct: 236 NDVTYNVLVNGLSHSGEM-------EQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQI 288
Query: 313 KGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIF 372
+ L EM G P +TYN ++ LCK G+ +DA +LL+ M+ +N PD ++Y
Sbjct: 289 EEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTL 348
Query: 373 IVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYK 432
I R+G AF F ++ R L P + T+ I G R D + L + K
Sbjct: 349 IYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDG---LCRLGDLDVAMRLKDEMIK 405
Query: 433 SSSN---MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ ++ K N MAK + EM+ GL+P+ Y
Sbjct: 406 HGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAY 450
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 79/185 (42%), Gaps = 1/185 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI +CR D L EM + G +P T+ + CK G A EL +
Sbjct: 377 VVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFD 436
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EML R PD Y IV ++G AF +M+ RG P L T+ FI G
Sbjct: 437 EMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLG 496
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
++A + V ++ Y+ + H + A+ + EM+ G+ P+V Y
Sbjct: 497 NLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTY- 555
Query: 476 RVLKH 480
VL H
Sbjct: 556 TVLIH 560
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 93/198 (46%), Gaps = 2/198 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+ I + + + K +L+ +M G P +TY ++ G A L EML
Sbjct: 485 YNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEML 544
Query: 359 GRNCHPDAITYEIFI-VYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
+ P +TY + I Y+ R G+ +A F +M ++G+ P + T+ A I G +
Sbjct: 545 SKGIFPSVVTYTVLIHSYAVR-GRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKM 603
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ AY + K S + Y++L + + + A + +M+ ++P+ +R +
Sbjct: 604 DQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSL 663
Query: 478 LKHLHTSHQEHMAKCLSS 495
LKHL+ ++ H+ + L +
Sbjct: 664 LKHLNKDYKLHVVRHLEN 681
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 85/186 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN ++ C++ + LL +M+ +GC P +TYN ++ L +G+ A EL++
Sbjct: 202 VVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQ 261
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML TY+ I C G+ + A +M+ RG P + T+ + G +
Sbjct: 262 DMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWG 321
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R DA K + + +K + Y+ L + + N A + +E+ L P+V Y
Sbjct: 322 RVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYN 381
Query: 476 RVLKHL 481
++ L
Sbjct: 382 TLIDGL 387
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 66/154 (42%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
EM G P +TYN + L K G +A EL+++ML PD +TY I G
Sbjct: 472 EMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAG 531
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
A F +M+ +G+ P + T+ I Y + R + A + +K + + Y+
Sbjct: 532 HLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYN 591
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
L + K A N +EM G+ PN Y
Sbjct: 592 ALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTY 625
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 3/94 (3%)
Query: 276 FSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYN 335
++L +EM + K V YN LI +C+ + EM+ G P TY
Sbjct: 570 LAILHFFEMHE---KGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYT 626
Query: 336 YVLGVLCKNGQDADACELLEEMLGRNCHPDAITY 369
++ C G +A L ++ML R PD+ T+
Sbjct: 627 ILINENCNLGHWQEALRLYKDMLDREIQPDSCTH 660
>gi|255660952|gb|ACU25645.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 376
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 2/187 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI + F+ + EM + C P +TYN ++ LCKN +A L++
Sbjct: 164 VHVYNTLINGLAGASKFEDAIRVFREMGTMHCPPTIITYNTLINGLCKNEMFGEAYNLVK 223
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
E+L + P ITY + + C K + A +NQ+ +G +P + H I G
Sbjct: 224 ELLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVG 283
Query: 416 RYEDAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + A + +++K + N++ ++ L K+ + A + + +++NGL P++ Y
Sbjct: 284 KMQLALS-LYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISY 342
Query: 475 RRVLKHL 481
LK L
Sbjct: 343 NITLKGL 349
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 97/226 (42%)
Query: 282 YEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+E+ + + + R VS +NI+++ + + M++ G ++TY ++
Sbjct: 45 FELWEMMGSEGNRSVSSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGF 104
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
CKNG + +LE + DA Y I C+ D A + N M+K G +P +
Sbjct: 105 CKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRALSVLNGMIKSGCKPNV 164
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
+ I G ++EDA + + + + Y+ L + KN A N++ E
Sbjct: 165 HVYNTLINGLAGASKFEDAIRVFREMGTMHCPPTIITYNTLINGLCKNEMFGEAYNLVKE 224
Query: 462 MMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSVE 507
++ GL P V Y ++K L H+ A L ++ +S V+
Sbjct: 225 LLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQ 270
>gi|410109945|gb|AFV61052.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rubella]
Length = 394
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 87/183 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ +L EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 194 VYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLALEIYK 253
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G A + ++M +GL+P T+ A I G
Sbjct: 254 QMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTALIDGCCKEG 313
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ A+++ + ++ Y+ L S + V A+ +L EM+ GL+P+ Y
Sbjct: 314 DLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYT 373
Query: 476 RVL 478
++
Sbjct: 374 MII 376
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 55/115 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN L+ R D L M G +P TY+ ++ LCK + DA EL +
Sbjct: 159 VVSYNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFD 218
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
EML + P+ +T+ I C+ G+ D+A + QM+ + L P L T+ I G
Sbjct: 219 EMLVKGLVPNGVTFTTLIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYG 273
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 79/184 (42%), Gaps = 14/184 (7%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ C+ D + + + + + G P ++YN ++ + G + L M
Sbjct: 126 FFNILMHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAM 185
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
PD TY + I C+ K D A F++M+ +GL P T I G+ R
Sbjct: 186 HASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR- 244
Query: 418 EDAYKYVVLSADKYKS--SSNML-----YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
V L+ + YK S ++L Y+ L K + A +++ EM GL+P+
Sbjct: 245 ------VDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPD 298
Query: 471 VSVY 474
Y
Sbjct: 299 KITY 302
>gi|147793827|emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera]
Length = 546
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 147/358 (41%), Gaps = 11/358 (3%)
Query: 129 TPKQVSEIIELLR-SGDSETESKLLSMSVSLSNASVIEILRVLNSEKVSALCFLKYMREI 187
T +V +++ R S SE E L +SL++ V+++L+ S+ A F +
Sbjct: 86 TALEVQNLLKTYRDSSVSEIEGALHQCRLSLTDDLVLDVLKRHRSDWRPAYVFFNWASRC 145
Query: 188 MPE--FYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKAL 245
E + + + ++D GR+ + M QL ++ + + NE+ FG L ++
Sbjct: 146 GXESGYSPGCGVHNEILDILGRMRRFHEMTQLFDEMSKRKGLXNERTFGVLLNRYAAAHK 205
Query: 246 TKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVI--KKTE--RKVSYYNI 301
T++ + ++ +G + + L+ EMA+++ KK E + N+
Sbjct: 206 TEEAV-KIFYKRKGLGFELDLIAFQTLLMSLCRYKHVEMAEFLFHSKKNEFPPDIKSMNV 264
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
++ C + + ++ C+P TY + L K G+ + A +L + M +
Sbjct: 265 ILNGWCVLGSLREAKRFWNDIITSKCKPDKFTYGIFINSLTKAGKLSTAVKLFQAMWEKG 324
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
C+PD I C + A +M +R QP +AT+ + IK R+E Y
Sbjct: 325 CNPDVAICNCIIDALCFKKRIPEALEVLREMNERDCQPDVATYNSLIKHLCKIQRFEKVY 384
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
+ + K + Y L K P +L M +NG R N Y +LK
Sbjct: 385 ELLDDMEQKGCLPNARTYGYLLKSTKK---PEEVPGILERMERNGCRMNSDCYNLILK 439
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 56/140 (40%), Gaps = 32/140 (22%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL----------GVL---- 341
V+ YN LIK +C+ F+ +LL +M Q GC P TY Y+L G+L
Sbjct: 364 VATYNSLIKHLCKIQRFEKVYELLDDMEQKGCLPNARTYGYLLKSTKKPEEVPGILERME 423
Query: 342 ---------CKN---------GQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
C N G + L+EM PD TY I I G+ D
Sbjct: 424 RNGCRMNSDCYNLILKLYMDWGYELKLRSTLDEMERNGMGPDQRTYTIMIHGLYDKGRMD 483
Query: 384 VAFNFFNQMVKRGLQPRLAT 403
A ++F QM G+ P T
Sbjct: 484 DALSYFKQMTLMGMVPEPRT 503
>gi|115482764|ref|NP_001064975.1| Os10g0499500 [Oryza sativa Japonica Group]
gi|22165074|gb|AAM93691.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31432889|gb|AAP54465.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639584|dbj|BAF26889.1| Os10g0499500 [Oryza sativa Japonica Group]
gi|125575293|gb|EAZ16577.1| hypothetical protein OsJ_32049 [Oryza sativa Japonica Group]
gi|215694503|dbj|BAG89496.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215697419|dbj|BAG91413.1| unnamed protein product [Oryza sativa Japonica Group]
gi|295901486|dbj|BAJ07249.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
Group]
gi|295901490|dbj|BAJ07251.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
Group]
Length = 506
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ +I +C+ ++ M + G P TY ++ C +GQ +A + LE
Sbjct: 233 VVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLE 292
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M P+ +TY F+ Y C+ G+ A F+ MVKRGL+P + T+++ + GY I
Sbjct: 293 KMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSMVKRGLKPDITTYSSLLHGYAIEG 352
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ + L + +++ L K A V S+M + GL+PN Y
Sbjct: 353 ALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRQQGLKPNCVTYS 412
Query: 476 RVL 478
++
Sbjct: 413 TLI 415
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 2/182 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQ--VGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
+ I++K +C + +LL M GC P ++Y+ V+ L K G A E
Sbjct: 164 HTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVIDGLLKGGDPDKAYATYRE 223
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
ML R P+ + Y I C+ D A ++MVK G+ P T+ + + G+ +
Sbjct: 224 MLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQ 283
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
+A K++ + + YS KN A+ + M+K GL+P+++ Y
Sbjct: 284 LTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSMVKRGLKPDITTYSS 343
Query: 477 VL 478
+L
Sbjct: 344 LL 345
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 78/228 (34%), Gaps = 70/228 (30%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ C L +M G EP +TY+ + LCKNG+ +A ++ + M+
Sbjct: 271 YTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSMV 330
Query: 359 GRNCHPDAITY-----------------------------------EIFIVYSCRVGKFD 383
R PD TY I S + GK D
Sbjct: 331 KRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVD 390
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
A F++M ++GL+P T++ I GY R E+A
Sbjct: 391 EAMLVFSKMRQQGLKPNCVTYSTLINGYCKITRMENALA--------------------- 429
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
+ EM+ NG+ PN Y +L+ L + + AK
Sbjct: 430 --------------LFQEMVSNGVSPNFITYNIMLQGLFRTGRTATAK 463
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 86/215 (40%), Gaps = 45/215 (20%)
Query: 276 FSVLGLYEMAKYVIKKTER-KVSYYNILIKEMCRRCDFKGPRDLLVE-MRQVGCEPITLT 333
F+ LG +V+KK R + +N L+K +C D+++ M ++ C P +
Sbjct: 110 FAALG------HVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDIVLRGMTELSCVPNVFS 163
Query: 334 YNYVLGVLCKNGQDADACELLEEML--GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQ 391
+ +L LC + +A ELL M G C P+ ++Y I + G D A+ + +
Sbjct: 164 HTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVIDGLLKGGDPDKAYATYRE 223
Query: 392 MVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNN 451
M+ R + P + +++ I + A + +HD+
Sbjct: 224 MLDRRILPNVVIYSSIIAALCKGQAMDKAME----------------------VHDR--- 258
Query: 452 PVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
M+KNG+ PN Y ++ +S Q
Sbjct: 259 ----------MVKNGVTPNCFTYTSLVHGFCSSGQ 283
>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
Length = 647
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 87/190 (45%), Gaps = 4/190 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ ++I +CR +L + GCEP +TYN + LCK + DA +LL++M
Sbjct: 44 FTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMD 103
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C P +TY + + G+ D A QMV++G P L T+ I G R E
Sbjct: 104 EKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVE 163
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKN----GLRPNVSVY 474
+A + V +Y+ L S K A L++M++N G+ P+V ++
Sbjct: 164 EARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIH 223
Query: 475 RRVLKHLHTS 484
V++ L S
Sbjct: 224 NLVIRQLCAS 233
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 88/186 (47%), Gaps = 5/186 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNI++ +C+ + M + GC +TY+ ++ C G + A EL ML
Sbjct: 397 YNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRML 456
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R C P+ ++Y I I CR GK A+ +F ++++R L P + T +F+ G + R +
Sbjct: 457 DRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHG--LCQRLD 514
Query: 419 DAYKYVVL--SADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
V L S +S N+ YS+L + + + EM+ G+ P+V V+
Sbjct: 515 TVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFN 574
Query: 476 RVLKHL 481
+++ L
Sbjct: 575 TLIRWL 580
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 80/180 (44%), Gaps = 3/180 (1%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
L+ +C+ LL EM C P + + V+ LC+ + +A +LE +
Sbjct: 15 LLNGLCKTGQLDRAMLLLDEM---PCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAG 71
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
C PD +TY +FI C+ + D AF +M ++ P T+ A + G R ++A
Sbjct: 72 CEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAM 131
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ +K S + Y+++ K A+ + +M+ NG RP+ VY ++ L
Sbjct: 132 AILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGL 191
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 78/181 (43%), Gaps = 10/181 (5%)
Query: 244 ALTKKG-IWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNIL 302
A+ ++G + VV + G C V A +E+F + + + E + YNI+
Sbjct: 419 AMEERGCVATVVTYSALMDGFCSEGNVSAAVELFR--------RMLDRGCEPNLVSYNII 470
Query: 303 IKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKN-GQDADACELLEEMLGRN 361
I+ +CR ++ Q P T+N L LC+ D EL E M+ +
Sbjct: 471 IRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQG 530
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
P+ +Y I + CR G +V F++MV RG+ P + I+ I R ++A
Sbjct: 531 TSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEAL 590
Query: 422 K 422
+
Sbjct: 591 E 591
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%)
Query: 319 LVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCR 378
L E + G P +TY ++ LCK G+ + CE EM R PDA+TY I +
Sbjct: 312 LKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMK 371
Query: 379 VGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML 438
A + QM++ G T+ + G R +AY + ++ ++ +
Sbjct: 372 AKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVT 431
Query: 439 YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
YS L N A + M+ G PN+ Y +++ L
Sbjct: 432 YSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGL 474
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 56/114 (49%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N L+ +C+ + + +M + C P TY ++ K G+ +A L+E +
Sbjct: 257 FNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAV 316
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
R PDA+TY I C++G+ + F++M RG +P T+AA I G+
Sbjct: 317 ERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFM 370
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 79/192 (41%), Gaps = 1/192 (0%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
+ E V +N++I+++C + + E+ + T+N ++ LCK + +
Sbjct: 214 RGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDD-SLDLTHFTFNPLVAALCKAERTEE 272
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A +++M R C P TY + ++G+ D A + V+RG P T+ + I
Sbjct: 273 AIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIID 332
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
G R E+ + ++ + Y+ L K A V +M+++G
Sbjct: 333 GLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVV 392
Query: 470 NVSVYRRVLKHL 481
+ Y +L L
Sbjct: 393 STVTYNIILDGL 404
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPR-DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
V +N + +C+R D G +L M G P +Y+ ++ +C+ G E+
Sbjct: 499 VYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIF 558
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR 395
EM+ R PD + + I + C G+ D A F ++ +R
Sbjct: 559 HEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERR 599
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 78/202 (38%), Gaps = 5/202 (2%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
+ + V K + Y ++I + + + R + V+M GC P Y ++ L K
Sbjct: 134 LEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAK 193
Query: 344 NGQDADACELLEEMLGRNC----HPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
G+ +A L +M+ C PD + + + I C G + A +F+++ L
Sbjct: 194 IGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDEL-DDSLDL 252
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
T + R E+A +V +++ + Y+ L K A L
Sbjct: 253 THFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQL 312
Query: 460 SEMMKNGLRPNVSVYRRVLKHL 481
E ++ G P+ Y ++ L
Sbjct: 313 KEAVERGFIPDAVTYTSIIDGL 334
>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
Length = 704
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 80/183 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+NIL+K +CR + LL EMR+ P +YN V+ C+ + A EL EM
Sbjct: 145 HNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMK 204
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
G C +T+ I I C+ GK D A F +M GL+ L + + I+G+ +
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELD 264
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
++ S + Y+ L K A + M++ G+RPNV Y ++
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLI 324
Query: 479 KHL 481
L
Sbjct: 325 DGL 327
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 108/253 (42%), Gaps = 10/253 (3%)
Query: 248 KGIWRVVEVLNQVGGS-CLVSGVR--ALIEMFSVLGLYEMAKYVIKKT-----ERKVSYY 299
K + + +E+ N++ GS C S V LI+ F G + A +K+ E + Y
Sbjct: 191 KELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVY 250
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
LI+ C + + L E+ + G P +TYN ++ CK GQ +A E+ E M+
Sbjct: 251 TSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIE 310
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
R P+ TY I C VGK A N M+++ +P T+ I D
Sbjct: 311 RGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVAD 370
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNG--LRPNVSVYRRV 477
A + V L + N+ Y++L + A +L M+K+ P+V Y +
Sbjct: 371 AVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNAL 430
Query: 478 LKHLHTSHQEHMA 490
+ L ++ H A
Sbjct: 431 IHGLCKENRLHQA 443
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 56/133 (42%)
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
K R Y +I C+ + LL +MR +P YN +L LCK G A
Sbjct: 489 KIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQA 548
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
L EEM N PD +++ I I S + G A + M + GL P L T++ I
Sbjct: 549 WRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINR 608
Query: 411 YFIFYRYEDAYKY 423
+ ++A +
Sbjct: 609 FLKLGYLDEAISF 621
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 8/156 (5%)
Query: 252 RVVEVLNQVGGSCLV---SGVRALIEMFSVLGLYEMAKYV-----IKKTERKVSYYNILI 303
+ +E+ Q+ S +V A+I+ F G+ +AK + + + + V YN L+
Sbjct: 477 KAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLL 536
Query: 304 KEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH 363
+C+ L EM++ P +++N ++ K G A LL M
Sbjct: 537 SSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLS 596
Query: 364 PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
PD TY I ++G D A +FF++MV G +P
Sbjct: 597 PDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEP 632
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 8/118 (6%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVG--CEPITLTYNYVLGVLCKNG---QDADACEL 353
YNIL+ +C + D LL M + +P ++YN ++ LCK Q D +L
Sbjct: 390 YNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDL 449
Query: 354 LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
L E LG D +T I + + + G + A + Q+ + T+ A I G+
Sbjct: 450 LVEKLGAG---DRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGF 504
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 91/203 (44%), Gaps = 5/203 (2%)
Query: 276 FSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYN 335
FSVL AK + + ++ +N LI+ +C L +M G +P +TY
Sbjct: 123 FSVL-----AKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYG 177
Query: 336 YVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR 395
++ LCK G + A LL M NC PD + Y I C+ + AFN F++M+ +
Sbjct: 178 TLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQ 237
Query: 396 GLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMA 455
G+ P + T+ + I ++ + + + +++S + K + A
Sbjct: 238 GISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEA 297
Query: 456 KNVLSEMMKNGLRPNVSVYRRVL 478
+V+ M+K G+ PNV Y ++
Sbjct: 298 HDVVDMMIKRGVEPNVVTYNALM 320
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 61/122 (50%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C C++K LL EM P + ++ V+ LCK G+ +A ++++ M+
Sbjct: 246 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMI 305
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R P+ +TY + C + D A F+ MV +G P + +++ I GY R E
Sbjct: 306 KRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIE 365
Query: 419 DA 420
A
Sbjct: 366 KA 367
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 94/220 (42%), Gaps = 5/220 (2%)
Query: 283 EMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYV 337
E A Y+ ++ RK Y+ L+ +C + L EM G P ++Y +
Sbjct: 365 EKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCIL 424
Query: 338 LGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
L LCKN + +A LL+ + G N PD Y I I CR G+ + A + F+ + +GL
Sbjct: 425 LDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGL 484
Query: 398 QPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKN 457
P + T+ I G +A K K S + Y+L+ +NN +
Sbjct: 485 HPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQ 544
Query: 458 VLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRY 497
+L EM+ G +VS +++ L + K + S +
Sbjct: 545 LLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEF 584
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 80/189 (42%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
+ V Y +I +C+ +L EM G P TYN ++ LC +
Sbjct: 205 QPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTA 264
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
LL EM+ P+ + + + C+ GK A + + M+KRG++P + T+ A + G+
Sbjct: 265 LLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHC 324
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
+ ++A K K + + YS L + + K A + EM + L PN
Sbjct: 325 LRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTV 384
Query: 473 VYRRVLKHL 481
Y ++ L
Sbjct: 385 TYSTLMHGL 393
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 96/221 (43%)
Query: 286 KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNG 345
+ V K V ++ ++ +C+ D++ M + G EP +TYN ++ C
Sbjct: 268 EMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRS 327
Query: 346 QDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
+ +A ++ + M+ + PD ++Y I C++ + + A F +M ++ L P T++
Sbjct: 328 EMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYS 387
Query: 406 AFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKN 465
+ G R +DA + + + Y +L KN A +L + +
Sbjct: 388 TLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGS 447
Query: 466 GLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
+ P++ +Y V+ + + + A+ L S SS L +V
Sbjct: 448 NMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNV 488
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 64/161 (39%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M G P T N ++ C + A +L ++L P+ T+ I C G
Sbjct: 93 QMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEG 152
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
K + F++M+ G QP + T+ I G A + + ++Y+
Sbjct: 153 KIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYT 212
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ K+ A N+ SEM+ G+ P++ Y ++ L
Sbjct: 213 SIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHAL 253
>gi|414877568|tpg|DAA54699.1| TPA: hypothetical protein ZEAMMB73_211194, partial [Zea mays]
Length = 709
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 71/138 (51%)
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
Y+ ++ C NG+ ++A E++ EM+ + C PD +TY + CR+G+ D A M
Sbjct: 342 YSAIVHSFCLNGRMSEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMY 401
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPV 453
K G +P TH A + G + +A++ + S +++ + S + YS++ + V
Sbjct: 402 KNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSGITYSVIMHGFRREGKLV 461
Query: 454 MAKNVLSEMMKNGLRPNV 471
+ +V+ +M++ G P
Sbjct: 462 ESCDVVMQMLQKGFFPTA 479
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 1/158 (0%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
MR+VG +P +TYN ++ LC + +A E++ ML C PD I+Y + + C+ +
Sbjct: 224 MRRVGVDPDVVTYNCLIKGLCGARRIVEALEMIGSMLQNGCPPDKISYFTVMSFLCKEKR 283
Query: 382 FDVAFNFFNQMV-KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+N +M G+ P T+ I G ++A ++ S K + YS
Sbjct: 284 VAEVWNLLERMRNDAGIFPDQITYNMLIHGLAKHGHADEALTFLRESEGKRFRVDQVGYS 343
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ N AK ++ EM+ G RP+V Y V+
Sbjct: 344 AIVHSFCLNGRMSEAKEIIGEMISKGCRPDVVTYSAVV 381
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 80/189 (42%), Gaps = 5/189 (2%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LIK +C +++ M Q GC P ++Y V+ LCK + A+ LLE
Sbjct: 233 VVTYNCLIKGLCGARRIVEALEMIGSMLQNGCPPDKISYFTVMSFLCKEKRVAEVWNLLE 292
Query: 356 EMLGRN---CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
M RN PD ITY + I + G D A F + + + ++A + +
Sbjct: 293 RM--RNDAGIFPDQITYNMLIHGLAKHGHADEALTFLRESEGKRFRVDQVGYSAIVHSFC 350
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
+ R +A + + K + YS + + A+ ++ M KNG +PN
Sbjct: 351 LNGRMSEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTV 410
Query: 473 VYRRVLKHL 481
+ +L L
Sbjct: 411 THTALLNGL 419
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 5/137 (3%)
Query: 268 GVRALIEMFSVLGLYEMAKYVI-----KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
G A++ F + G AK +I K V Y+ ++ CR + R ++ M
Sbjct: 341 GYSAIVHSFCLNGRMSEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHM 400
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
+ GC+P T+T+ +L LCK G+ ++A ELL + P ITY + + R GK
Sbjct: 401 YKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSGITYSVIMHGFRREGKL 460
Query: 383 DVAFNFFNQMVKRGLQP 399
+ + QM+++G P
Sbjct: 461 VESCDVVMQMLQKGFFP 477
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 78/180 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ ++ C ++++ EM GC P +TY+ V+ C+ G+ A ++++ M
Sbjct: 342 YSAIVHSFCLNGRMSEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMY 401
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C P+ +T+ + C+VGK A+ N+ + P T++ + G+ +
Sbjct: 402 KNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSGITYSVIMHGFRREGKLV 461
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
++ V+ K + + +LL K P AK+ + + G NV + V+
Sbjct: 462 ESCDVVMQMLQKGFFPTAVEINLLIHALCKEQKPARAKDFMEQCQSKGCFINVVNFTTVI 521
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 9/164 (5%)
Query: 263 SCLVSGV---RALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+CL+ G+ R ++E ++G M + K+SY+ ++ +C+ +LL
Sbjct: 237 NCLIKGLCGARRIVEALEMIG--SMLQNGCPPD--KISYFTVM-SFLCKEKRVAEVWNLL 291
Query: 320 VEMR-QVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCR 378
MR G P +TYN ++ L K+G +A L E G+ D + Y + C
Sbjct: 292 ERMRNDAGIFPDQITYNMLIHGLAKHGHADEALTFLRESEGKRFRVDQVGYSAIVHSFCL 351
Query: 379 VGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
G+ A +M+ +G +P + T++A + G+ + A K
Sbjct: 352 NGRMSEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARK 395
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 86/224 (38%), Gaps = 33/224 (14%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N+LI +C+ +D + + + GC + + V+ + G A LL++M
Sbjct: 483 NLLIHALCKEQKPARAKDFMEQCQSKGCFINVVNFTTVIHGFSRQGDLESALSLLDDMYL 542
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
N HPD +TY + + R GK A +M+ RGL P T+ I Y ED
Sbjct: 543 TNRHPDVVTYTVVVDALGRKGKMKEATALVEKMLNRGLLPTPVTYRTVIHRYCEKGAVED 602
Query: 420 ----------------AYKYVV---LSADKYKSSSNMLYSLLASLHDKNNN--------- 451
AY V+ + K + N+L +L S ++
Sbjct: 603 LLNLLDKMLTKQGFSSAYNQVIEKLCAFGKLSEAYNLLSKVLRSASKRDAQTCHILMDSF 662
Query: 452 -----PVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
P+ + NV M + L P++ + ++V L + H A
Sbjct: 663 LNRGLPLQSYNVACRMFQRNLIPDLKLCQKVDSQLALVGERHAA 706
>gi|410109895|gb|AFV61027.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
urticoides]
Length = 412
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ G L EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 193 VYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 252
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G A + ++M +GL+P T+ I G
Sbjct: 253 QMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEG 312
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ A+++ + ++ Y+ L S + V A+ +L EM+ GL+P+ Y
Sbjct: 313 DLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYT 372
Query: 476 RVL 478
++
Sbjct: 373 MIV 375
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 14/188 (7%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ C+ D + + + + + G P ++YN ++ + G + L M
Sbjct: 125 FFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAM 184
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
L PD TY + I C+ K D A F++M+ +GL P T I G+ R
Sbjct: 185 LASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGR- 243
Query: 418 EDAYKYVVLSADKYKS--SSNML-----YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
V L+ + YK S ++L Y+ L K + A +++ EM GL+P+
Sbjct: 244 ------VDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPD 297
Query: 471 VSVYRRVL 478
Y ++
Sbjct: 298 KFTYTTLI 305
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/148 (20%), Positives = 61/148 (41%)
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
+N ++ CK+G A + + + P ++Y + R+G D F + M+
Sbjct: 126 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 185
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPV 453
G+QP + T++ I G + + A K + + ++ L H KN
Sbjct: 186 ASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 245
Query: 454 MAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+A + +M+ L P++ Y ++ L
Sbjct: 246 LAMEIYKQMLSQSLLPDLITYNTLIYGL 273
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
S YN LI+ C D + +L M + P +TYN ++ C +G A +LE
Sbjct: 435 TSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLE 494
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M C PD +Y I C++ K ++A FN+M+ RGL P T+ A I GY
Sbjct: 495 LMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDE 554
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ + A + + + Y++L K NN A+ + M++ + P+V Y
Sbjct: 555 KLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYS 614
Query: 476 RVLKHL 481
V+ L
Sbjct: 615 TVINGL 620
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 3/183 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I +C+ + + ++ ++ + G +P T TY ++ C+N A E+ M
Sbjct: 231 YNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMD 290
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C P+A TY I C G+ + A +F ++M + G+ P + T A I R E
Sbjct: 291 EEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIE 350
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA+K + K + Y+ L S + MA + M ++G+ PN Y ++
Sbjct: 351 DAWKIFIDMKKKGCKPNVYTYTSLISGQRVSR---MAIGLFHRMSRDGVVPNTVTYNALM 407
Query: 479 KHL 481
L
Sbjct: 408 NVL 410
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 85/208 (40%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI C+ +L M++ GC P TYN ++ L K + A EL + ML
Sbjct: 543 YTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVML 602
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD +TY I C G +A FN+MVK G P L T+++ I+ R E
Sbjct: 603 EEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVE 662
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + + + Y + + + A + L EM+ G +P + Y ++
Sbjct: 663 EAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLI 722
Query: 479 KHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
K L H L + S+ + +
Sbjct: 723 KGLQNEMVYHKLVALPNAASTSTFDDQI 750
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 70/159 (44%), Gaps = 20/159 (12%)
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G +P L YN V+ LCK+G DA ++ ++ PD TY I+ CR D A
Sbjct: 223 GLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSA 282
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
F FN+M + G +P AT++ I G R +A ++ S + +L ++
Sbjct: 283 FEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFI---------SEMTRHGVLPTV 333
Query: 446 HDKNNNPVM----------AKNVLSEMMKNGLRPNVSVY 474
H P++ A + +M K G +PNV Y
Sbjct: 334 H-TFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTY 371
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 82/183 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNI+IK C D +L M+ GC+P +Y ++ CK + A + EM+
Sbjct: 473 YNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMM 532
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R P+ +TY I C+ K D A +M + G +P + T+ I G +
Sbjct: 533 DRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFS 592
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + + ++ S + YS + + N +A + ++M+K+G PN+ Y ++
Sbjct: 593 GAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLI 652
Query: 479 KHL 481
+ L
Sbjct: 653 QAL 655
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 17/188 (9%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +I CR D ++ M + GCEP TY+ ++ LC +G+ +A + + EM
Sbjct: 266 YTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMT 325
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI----- 413
P T+ IV C +G+ + A+ F M K+G +P + T+ + I G +
Sbjct: 326 RHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAI 385
Query: 414 --FYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
F+R + VV + Y + N+L +N A V + M K+G PN
Sbjct: 386 GLFHRM--SRDGVVPNTVTYNALMNVLM--------ENMEIDSALIVFNMMGKHGCLPNT 435
Query: 472 SVYRRVLK 479
S Y +++
Sbjct: 436 SSYNELIR 443
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 12/156 (7%)
Query: 267 SGVRALIEMFSVL-----------GLYEMAKYVIK-KTERKVSYYNILIKEMCRRCDFKG 314
SG R ++ ++VL G E+ K +++ K V Y+ +I +C
Sbjct: 569 SGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPL 628
Query: 315 PRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIV 374
++ +M + GC P TY+ ++ L + G+ +A E+ E+ + PD +TY I
Sbjct: 629 ALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIE 688
Query: 375 YSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
GK D AF+F +M+ G QP L T+ IKG
Sbjct: 689 VCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKG 724
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 64/129 (49%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN+LI + ++ +F G +L M + P +TY+ V+ LC NG A E+
Sbjct: 575 VQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFN 634
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M+ C P+ TY I + G+ + A F+++ K+GL P T+ I+ +
Sbjct: 635 KMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSG 694
Query: 416 RYEDAYKYV 424
+ + A+ ++
Sbjct: 695 KVDRAFDFL 703
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 2/158 (1%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN-CHPDAITYEIFIVYS 376
L M + G P T+TYN ++ VL +N + D+ ++ M+G++ C P+ +Y I
Sbjct: 387 LFHRMSRDGVVPNTVTYNALMNVLMEN-MEIDSALIVFNMMGKHGCLPNTSSYNELIRGY 445
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
C +G + A + M+K P L T+ IKGY + A + + L
Sbjct: 446 CTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDE 505
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
Y+ L S K + +A + +EMM GL PN Y
Sbjct: 506 WSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTY 543
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 80/218 (36%), Gaps = 32/218 (14%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E + Y+ LI +C D + EM + G P T+ + LC G+ DA +
Sbjct: 295 EPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWK 354
Query: 353 LLEEMLGRNCHPDAITYEIFI----VYSCRVGKF-------------------------- 382
+ +M + C P+ TY I V +G F
Sbjct: 355 IFIDMKKKGCKPNVYTYTSLISGQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENM 414
Query: 383 --DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
D A FN M K G P +++ I+GY E A + + + + Y+
Sbjct: 415 EIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYN 474
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
++ + + + +A VL M NG +P+ Y ++
Sbjct: 475 IIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELI 512
>gi|357444861|ref|XP_003592708.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355481756|gb|AES62959.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 1430
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 119/259 (45%), Gaps = 17/259 (6%)
Query: 228 LNEKAFGFLPVLISSKALTK----------KGIWRVVEVLNQVGGSCLVSGVRALIEMFS 277
L ++A+ + ++I SK+ T K + R+V N S ++ G ++
Sbjct: 386 LMDEAYRLIRMMIQSKSSTDSDENRMDVFFKTVKRMV-FPNITSFSIVIDGFLKNDQLDL 444
Query: 278 VLGLY-EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNY 336
L L+ +M ++V K T + YN LI +C+ + +LL EM+++G EP TYN
Sbjct: 445 ALSLFNDMRRFVDKPT---ILIYNNLIDSLCKSNRLEKSYELLREMKELGIEPTHFTYNS 501
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS-CRVGKFDVAFNFFNQMVKR 395
+ G LCK + AC +L+EM G H I + +V C G+ A F + M ++
Sbjct: 502 IYGCLCKRKDVSAACVMLKEM-GSCGHGPWIKHTTLLVKELCDHGRVIEACEFLDNMTQQ 560
Query: 396 GLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMA 455
G P + +++A I G + A K + +++L K N A
Sbjct: 561 GFLPDIVSYSAAIGGLVNIQEVDHAMKIFKDLWSHGHCPDVVCFNVLIRGLCKVNRFTEA 620
Query: 456 KNVLSEMMKNGLRPNVSVY 474
+++ E++K GL P+V Y
Sbjct: 621 EDLFHELVKRGLSPSVVTY 639
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 92/236 (38%), Gaps = 22/236 (9%)
Query: 234 GFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTE 293
GFLP ++S A +GG + V +++F L + V+
Sbjct: 561 GFLPDIVSYSA--------------AIGGLVNIQEVDHAMKIFKDLWSHGHCPDVV---- 602
Query: 294 RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACEL 353
+N+LI+ +C+ F DL E+ + G P +TYN + CKNG A
Sbjct: 603 ----CFNVLIRGLCKVNRFTEAEDLFHELVKRGLSPSVVTYNLFIDCWCKNGNVDKAMAH 658
Query: 354 LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
L M + P +TY + C+ + D A F +M K G P T A I G
Sbjct: 659 LFRMTKEDKVPSVVTYTTLVDGFCKEERPDDAILLFKEMEKNGCPPNQITFMALIYGLCK 718
Query: 414 FYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
R +A Y+ K + +Y L S + + N A + EM+ G P
Sbjct: 719 CCRPTEALCYLREMQQKEMKPDSFIYVALLSAYLSDLNLTSAFEIFREMVDLGFFP 774
Score = 38.9 bits (89), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 10/165 (6%)
Query: 319 LVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCR 378
L EM+ G E T V+ C + A + +EM + + + + + +S +
Sbjct: 184 LNEMKGFGWEFDKYTLTPVIVTYCNAQRFDQALSVYKEMEEKGWVDERVCSMMALCFS-K 242
Query: 379 VGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM- 437
+G+ D AF +M + G++ T I G+ R + A + DK + +
Sbjct: 243 LGEVDKAFELVERMGECGMRLSEKTFCVLIHGFVKESRVDKALQLF----DKMRREDSFT 298
Query: 438 ----LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
LY +L KN + A ++ SEM + G+RP++ + +++
Sbjct: 299 PDVSLYDVLIGGLCKNKDTDRAISLFSEMKEFGVRPDIGILTKLI 343
>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
Length = 688
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 167/402 (41%), Gaps = 29/402 (7%)
Query: 101 SCRSQISKLGLLTSRCISSFAMVNGPYATP--KQVSEIIELLRSGDSETE-----SKLLS 153
C+++ + L ++ C+S+F + P K + ++ LR + ++L
Sbjct: 138 ECKARDATLDTCSTLCLSAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQ 197
Query: 154 MSVSLS----NASVIEILRVLNSEKVSALCFLKYMREIMPEFYKNSDICSLVIDNCGRLD 209
+ + S N + L+ +KV+ L LK M N ++VI R
Sbjct: 198 LGIEPSIVTYNTLLDSFLKEGRKDKVAML--LKEMETRGSGCLPNDVTYNVVITGLTRKG 255
Query: 210 DYETMRQLLNDFNVYQVCLNEKAFGFLPVLIS--SKALTKKGIWRVVEVLNQVGGSCLVS 267
D E +L+ + + +F + P++ ++ KK +E+ N+ G V
Sbjct: 256 DLEEAAELVEGMRLSK---KASSFTYNPLITGLLARGCVKKVYDLQLEMENE-GIMPTVV 311
Query: 268 GVRALIEMFSVLGLYEMAKYVIKKTERK-------VSYYNILIKEMCRRCDFKGPRDLLV 320
A+I GL E A+ +K E + V YN L+ C+ + K L
Sbjct: 312 TYNAMIHGLLQSGLVEAAQ--VKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFG 369
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
++R+ G P LTYN + C+ G +A L EEM + C P+ TY I + S V
Sbjct: 370 DLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVC 429
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+A FF++M+ +GLQP + I I A + + + SS + Y+
Sbjct: 430 SLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYN 489
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLH 482
+L K N AK + +M+ NGL+P+ Y L H H
Sbjct: 490 ILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITY-TCLIHAH 530
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 90/188 (47%), Gaps = 4/188 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNILI +C+ + K ++L ++M G +P +TY ++ C+ G +A ++ M+
Sbjct: 488 YNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMI 547
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P A+T+ + I CR G A+ +F +M++ G++P T+ I R +
Sbjct: 548 SDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQ 607
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + ++ ++ Y+LL + K N A EM +NG+ P+ ++ ++
Sbjct: 608 LASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALV 667
Query: 479 K----HLH 482
K H+H
Sbjct: 668 KGFDGHVH 675
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 67/159 (42%), Gaps = 4/159 (2%)
Query: 320 VEMRQV----GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
+E+R+V G T+TYN ++ LCK G DA EL +M+ PD ITY I
Sbjct: 470 LELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHA 529
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
C G A FN M+ GL P T I Y AY + ++ +
Sbjct: 530 HCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPN 589
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ Y++L + +A + EM++ GL N Y
Sbjct: 590 EITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTY 628
>gi|255660990|gb|ACU25664.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 376
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 89/184 (48%), Gaps = 2/184 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI + F+ + EM + C P +TYN ++ LCKN +A L++E+L
Sbjct: 167 YNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELL 226
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ +P ITY + + C K + A +NQ+ +G +P + H I G + +
Sbjct: 227 DKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQ 286
Query: 419 DAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
A + +++K + N++ ++ L K+ + A + + +++NGL P++ Y
Sbjct: 287 LALS-LYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNIT 345
Query: 478 LKHL 481
LK L
Sbjct: 346 LKGL 349
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 97/226 (42%)
Query: 282 YEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+E+ + + + R VS +NI+++ + + M++ G ++TY ++
Sbjct: 45 FELWEMMGSEGNRSVSSFNIMMRGLFDNGKVDEVISIWELMKKSGFVEDSITYGILVHGF 104
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
CKNG + +LE + DA Y I C+ D A + N M+K G +P
Sbjct: 105 CKNGYIDKSLHVLEMAQQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNA 164
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
+ I G ++EDA + + S + + Y+ L + KN A N++ E
Sbjct: 165 HVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKE 224
Query: 462 MMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSVE 507
++ GL P V Y ++K L H+ A L ++ +S V+
Sbjct: 225 LLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQ 270
>gi|255660774|gb|ACU25556.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 418
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 85/183 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ +L EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ D ITY I C+ G A + ++M +GL+P T+ I G
Sbjct: 266 QMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEG 325
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A++Y + ++ Y+ L S + V A+ +L EM+ GL+P + Y
Sbjct: 326 DLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 385
Query: 476 RVL 478
++
Sbjct: 386 MII 388
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 82/187 (43%), Gaps = 12/187 (6%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ + + + + + + + P +++N ++ K G + L M
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
PD TY + I C+ K D A F++M+ GL P T I G+ R
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRV 257
Query: 418 E---DAYKYVV---LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
+ + YK ++ LSAD + + ++Y L K + A++++ EM GL+P+
Sbjct: 258 DLAMEIYKQMLSQSLSAD-LITYNTLIYGLC-----KKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 472 SVYRRVL 478
Y ++
Sbjct: 312 ITYTTLI 318
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 88/209 (42%), Gaps = 5/209 (2%)
Query: 271 ALIEMFSVLGLYEMA-----KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI+ F G E A + + + + V YN +I + + + L EM
Sbjct: 351 ALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMA 410
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G EP T TYN ++ K+ A ACELL EM R P TY + I C A
Sbjct: 411 GIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKA 470
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
+QM++ G++P + + IK Y RYE A + + + Y+ L
Sbjct: 471 NEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIG 530
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ AK +L +M + G++PN Y
Sbjct: 531 LCRAKKVEEAKMLLVDMGEKGIKPNAHTY 559
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 88/192 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +L+ C++ K + + M G P TY ++ K G +A + +EM+
Sbjct: 314 YTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMI 373
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R + +TY I + G+ A + FN+M+ G++P T+ I GY +
Sbjct: 374 TRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMA 433
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + + + + S YS+L S +++ A VL +M++NG++PNV +Y ++
Sbjct: 434 KACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLI 493
Query: 479 KHLHTSHQEHMA 490
K + MA
Sbjct: 494 KAYVQESRYEMA 505
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 152/355 (42%), Gaps = 25/355 (7%)
Query: 136 IIELLRSGDSETESKLLSMSVSLSNASVIEILRVLNSEKVSALCFLKYMREIMPEFYKNS 195
I E LR D E ++ L ++V NA + I + K +L M I P+ +
Sbjct: 362 IEEALRIKD-EMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWT-- 418
Query: 196 DICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVE 255
+L+ID + D +LL + + L F + VLIS + + + E
Sbjct: 419 --YNLLIDGYLKSHDMAKACELLAEMKARK--LTPSPFTY-SVLISGLCHSSD-LQKANE 472
Query: 256 VLNQVGGSCLVSGVRALIEMFSVL-------GLYEMAKYVIK-----KTERKVSYYNILI 303
VL+Q+ + +GV+ + M+ L YEMA ++K + YN LI
Sbjct: 473 VLDQM----IRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLI 528
Query: 304 KEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH 363
+CR + + LLV+M + G +P TY + + K+G+ A ++ML
Sbjct: 529 IGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIV 588
Query: 364 PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY 423
P+ + Y I I C VG A + F M+++GL P + ++A I + ++A
Sbjct: 589 PNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGV 648
Query: 424 VVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ LY+ L S K + A + EM+ NG+ PN+ VY ++
Sbjct: 649 FLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLI 703
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 3/197 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y +IK C+ D + +L EM + C+P TYN +G LC+ G +A E+ +
Sbjct: 242 VYTYTNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLCQTGAVDEALEVKK 300
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+ + PD TY + + C+ + A F M GL P T+ A I G+
Sbjct: 301 LMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEG 360
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E+A + + + + Y+ + K A ++ +EM+ G+ P+ Y
Sbjct: 361 NIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYN 420
Query: 476 RVLKHLHTSHQEHMAKC 492
++ SH MAK
Sbjct: 421 LLIDGYLKSHD--MAKA 435
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 85/191 (44%), Gaps = 7/191 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ILI + + + L E +Q ++ +N ++ CK+G+ +A EL ++M+
Sbjct: 736 YCILIDGCGKEGNLEKALSLFHEAQQKSVGSLS-AFNSLIDSFCKHGKVIEARELFDDMV 794
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+ +TY I I + + A F M R + P T+ + + Y +
Sbjct: 795 DKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSY---NQIG 851
Query: 419 DAYKYVVLSAD---KYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ +K + L D + + + Y ++AS + K + A +L++ + G++ V+
Sbjct: 852 NRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFD 911
Query: 476 RVLKHLHTSHQ 486
++ HL Q
Sbjct: 912 ALIFHLCKEKQ 922
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 46/113 (40%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ILIK C + M + G P Y+ ++ L KNG+ +A + + L
Sbjct: 594 YTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFL 653
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
PD Y I C+ G + A +++M+ G+ P + + I Y
Sbjct: 654 KTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDY 706
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 47/108 (43%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
+K+ +S +N LI C+ R+L +M P +TY ++ K +
Sbjct: 761 QKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEE 820
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
A +L +M RN P+ +TY ++ ++G + F M RG+
Sbjct: 821 AEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGI 868
>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
Length = 760
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 98/218 (44%), Gaps = 11/218 (5%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTE-----RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
++++ + LG ++ A + + E + + YN L+ ++ F+ LL EM+Q G
Sbjct: 337 MVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRG 396
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
P LTY+ ++ CK+G DA L +++ PD + Y + C+ G D A
Sbjct: 397 ASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEAL 456
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGY----FIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
+M G++P + T+ + + Y + + ++ +L ++ Y
Sbjct: 457 ALLEEMADNGIRPNVITYNSLLDAYGRQCLMVRKNFPKLRFFLLPRVTMLLKPSVDYDQQ 516
Query: 443 ASLHDKNNNPVM--AKNVLSEMMKNGLRPNVSVYRRVL 478
+ + K ++ A V EM KNG++PNV + +L
Sbjct: 517 SLVDPKQKQALVLAAARVFREMAKNGVKPNVVTFSSIL 554
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 1/177 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEM-RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
YN LI CR L+ M + G EP +TY+ ++ K G +A L +EM
Sbjct: 263 YNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEM 322
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
+N PD I Y + R+G FD A + M + G + T+ A + Y ++
Sbjct: 323 RNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKF 382
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+A + + S + + YS L + K+ A + ++ K GL+P+V +Y
Sbjct: 383 REAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLY 439
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 83/212 (39%), Gaps = 40/212 (18%)
Query: 272 LIEMFSVLGLYEMAKYVIKK-----TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
+I+ ++ LGL A + ++ E YN ++ R +F + M + G
Sbjct: 302 MIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAG 361
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
+TYN +L K G+ +A LLEEM R P+ +TY I C+ G A
Sbjct: 362 FAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAM 421
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
F + K GLQP + +LYS L
Sbjct: 422 ALFQDVKKAGLQPDV-----------------------------------VLYSTLVDGC 446
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
KN +P A +L EM NG+RPNV Y +L
Sbjct: 447 CKNGSPDEALALLEEMADNGIRPNVITYNSLL 478
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 79/199 (39%), Gaps = 4/199 (2%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
++E K V K + YN +I + D+ + EM + G P +T+N ++
Sbjct: 178 IFEAMKVVCKPN---LVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISA 234
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK-RGLQP 399
+ + + + EM R D +TY I CR G+ + M K G++P
Sbjct: 235 AGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEP 294
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
+ T++ I GY +A ++ + Y+ + +H + N A ++
Sbjct: 295 SVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIR 354
Query: 460 SEMMKNGLRPNVSVYRRVL 478
M + G ++ Y +L
Sbjct: 355 RAMEEAGFAKDIVTYNALL 373
>gi|242050480|ref|XP_002462984.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
gi|241926361|gb|EER99505.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
Length = 668
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 129/297 (43%), Gaps = 24/297 (8%)
Query: 199 SLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIW-RVVEVL 257
SL++D R +E+ R LL + V ++ F +L + +G W + VL
Sbjct: 338 SLLVDAYTRAGRWESARILLKEMEADGV--KPSSYVFSRILAGFR---DRGDWQKAFAVL 392
Query: 258 NQVGGSCLVSGVRALIEMFSVL----GLYEMAKYVI--------KKTERKVSYYNILIKE 305
++ S GVR ++V+ G Y + + ++ E V +N LI
Sbjct: 393 REMQAS----GVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEEIEPDVVTWNTLIDA 448
Query: 306 MCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPD 365
C+ +L EMR+ C P T TYN ++ +L + + +L EM + P+
Sbjct: 449 HCKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWEGVEAMLSEMKEQGLVPN 508
Query: 366 AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV- 424
ITY + R G++ A + M GL+P + A + Y + A V
Sbjct: 509 IITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVK 568
Query: 425 VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ AD + S +L SL+ + ++ V A +VL M +NGLRP+V Y ++K L
Sbjct: 569 AMKADGLEVSILVLNSLINAF-GEDRRVVEAFSVLQFMKENGLRPDVITYTTLMKAL 624
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 89/230 (38%), Gaps = 10/230 (4%)
Query: 178 LCFLKYMRE--IMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGF 235
L L +RE +P+ S + + ++ N D + +LL D ++ + F
Sbjct: 175 LRLLSLLREHDFLPDLASYSHLLASLL-NTRDPPDAALLERLLGDLRESRLEPDAPLFSD 233
Query: 236 LPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAK------YVI 289
L + AL + ++ +G + + V ALI G A+ ++
Sbjct: 234 LISAFARAALPDAAL-ELLASAQAIGLTPRSNAVTALISALGSAGRVAEAEALFLEFFLA 292
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
+ + + YN L+K R K +L EM Q G P TY+ ++ + G+
Sbjct: 293 GEIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWES 352
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
A LL+EM P + + + G + AF +M G++P
Sbjct: 353 ARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRP 402
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 96/209 (45%), Gaps = 1/209 (0%)
Query: 283 EMAKYV-IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
++A+ V +K V +NILI +C+ D L EM+ GC P +TYN ++ L
Sbjct: 285 DLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNL 344
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
C G+ A +LL++M C ITY I C+ + + A F+QM +G+
Sbjct: 345 CSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNA 404
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
T I G + +DA++ + + +N+ Y+ + + + K + A ++L
Sbjct: 405 ITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILET 464
Query: 462 MMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
M NG +V Y ++ L + + +A
Sbjct: 465 MTANGFEVDVVTYGTLINGLCKAGRTQVA 493
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 78/185 (42%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
++ +N LI +C + DL ++ G P T+N ++ LCK G A L E
Sbjct: 264 ITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFE 323
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM C PD +TY I C +GK A + M G T+ I G
Sbjct: 324 EMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKM 383
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R E+A + + S + + ++ L K+ A ++++M+ GL+PN Y
Sbjct: 384 RIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYN 443
Query: 476 RVLKH 480
+L H
Sbjct: 444 SILTH 448
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 78/182 (42%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N+LI C+ + + + G EP +TYN + LC+N A ++++ M+
Sbjct: 163 NVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQ 222
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
PD TY I + C+ G+ + A NQMV RG P + T I R E+
Sbjct: 223 EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEE 282
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
A K S +++L + K +P +A + EM +G P+ Y ++
Sbjct: 283 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 342
Query: 480 HL 481
+L
Sbjct: 343 NL 344
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 80/194 (41%), Gaps = 1/194 (0%)
Query: 289 IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
++ R +N LI +C+ +L+ +M G +P +TYN +L CK G
Sbjct: 397 LQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIK 456
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
A ++LE M D +TY I C+ G+ VA M +G++P + +
Sbjct: 457 KAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVL 516
Query: 409 KGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM-AKNVLSEMMKNGL 467
+ F DA A+ + + Y ++ + P+ A + + EM+ G
Sbjct: 517 QSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGF 576
Query: 468 RPNVSVYRRVLKHL 481
P S +R + + L
Sbjct: 577 IPEFSSFRMLAEGL 590
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 90/216 (41%), Gaps = 3/216 (1%)
Query: 283 EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLC 342
EM IK V +N L+K +CR + +L EM G P T+ ++
Sbjct: 79 EMGARGIKP---DVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFV 135
Query: 343 KNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLA 402
+ G A + ML C +T + I C++G+ + A + Q + G +P
Sbjct: 136 EEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQI 195
Query: 403 THAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM 462
T+ F+ G A K + + + Y+++ + KN AK +L++M
Sbjct: 196 TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 255
Query: 463 MKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYS 498
+ G P+++ + ++ L T ++ A L+ + +
Sbjct: 256 VDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVT 291
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 79/195 (40%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ + K + EM G +P +T+N ++ LC+ Q A +LEEM
Sbjct: 57 YNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMS 116
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R PD T+ + G + A +M++ G T I GY R E
Sbjct: 117 SRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVE 176
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA Y+ + Y+ + +N++ A V+ M++ G P+V Y V+
Sbjct: 177 DALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVV 236
Query: 479 KHLHTSHQEHMAKCL 493
L + Q AK +
Sbjct: 237 NCLCKNGQLEEAKGI 251
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 76/190 (40%), Gaps = 11/190 (5%)
Query: 312 FKGPRDLLVEMRQ--VGCEPITLTYNYVLGVLCKNGQDADACELLE----EMLGRNCHPD 365
F DL++ Q G + T+ YN++L VL + + +LLE EM R PD
Sbjct: 33 FDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSK----MKLLESVYSEMGARGIKPD 88
Query: 366 AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV 425
+T+ + CR + A +M RG+ P T ++G+ E A +
Sbjct: 89 VVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKA 148
Query: 426 LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL-HTS 484
+ S++ + ++L + + K A + + + +G P+ Y + L
Sbjct: 149 RMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQND 208
Query: 485 HQEHMAKCLS 494
H H K +
Sbjct: 209 HVGHALKVMD 218
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 62/126 (49%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ++K MC D G +++ EM GC P + Y ++ +N + DA +L+EM
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD Y I+ + + D A +F +MV+ GL+P T+ AFI GY +
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFA 539
Query: 419 DAYKYV 424
A KYV
Sbjct: 540 SADKYV 545
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 137/325 (42%), Gaps = 31/325 (9%)
Query: 172 SEKVSALCFLKYMRE--IMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLN 229
SE SA ++K MRE ++P N +C+ G +++Y +++ + Y+ ++
Sbjct: 536 SEFASADKYVKEMRECGVLP----NKVLCT------GLINEYCKKEKVIEACSAYRSMVD 585
Query: 230 EKAFGFLPV--LISSKALTKKGIWRVVEVLNQVGGSCLVSGV---RALIEMFSVLGLYEM 284
+ G ++ + + E+ ++ G + V LI FS LG +
Sbjct: 586 QGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQK 645
Query: 285 AKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
A + + + V YN+L+ CR + + ++LL EM G P +TY ++
Sbjct: 646 ASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIID 705
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
CK+G A+A L +EM + PD+ Y + CR+ + A F K+G
Sbjct: 706 GYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCAS 764
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVL------SADKYKSSSNMLYSLLASLHDKNNNPV 453
A A I F F + E K VL S D++ +++ Y+++ K N
Sbjct: 765 STAPFNALINWVFKFGKTE--LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLE 822
Query: 454 MAKNVLSEMMKNGLRPNVSVYRRVL 478
AK + +M L P V Y +L
Sbjct: 823 AAKELFHQMQNANLMPTVITYTSLL 847
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 9/214 (4%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +LI + + + + EM + G P + YN +LG C++G+ A ELL+EM
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS 689
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ HP+A+TY I C+ G AF F++M +GL P + + G R
Sbjct: 690 VKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC---CRLN 746
Query: 419 DAYKYVVLSADKYK--SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL----RPNVS 472
D + + + K +SS ++ L + K + VL+ +M +PN
Sbjct: 747 DVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDV 806
Query: 473 VYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
Y ++ +L AK L + + +L +V
Sbjct: 807 TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTV 840
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 87/182 (47%), Gaps = 2/182 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE-LLEEM 357
Y++LI +C+ + + LLVEM +G TY+ ++ L K G++ADA + L+ EM
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK-GRNADAAKGLVHEM 338
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
+ + Y+ I + G + A F+ M+ GL P+ +A+ I+GY
Sbjct: 339 VSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNV 398
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
Y+ +V + S Y + + + A N++ EM+ +G RPNV +Y +
Sbjct: 399 RQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTL 458
Query: 478 LK 479
+K
Sbjct: 459 IK 460
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 76/172 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI+ CR + + +LLVEM++ TY V+ +C +G A +++EM+
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI 444
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C P+ + Y I + +F A +M ++G+ P + + + I G R +
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMD 504
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
+A ++V + + Y S + + + A + EM + G+ PN
Sbjct: 505 EARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 71/176 (40%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ I M + + + L M G P Y ++ C+ ELL EM
Sbjct: 350 YDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMK 409
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
RN TY + C G D A+N +M+ G +P + + IK + R+
Sbjct: 410 KRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFG 469
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
DA + + ++ + Y+ L K A++ L EM++NGL+PN Y
Sbjct: 470 DAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTY 525
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 92/255 (36%), Gaps = 36/255 (14%)
Query: 280 GLYEMAKYVIKKTER-KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
G Y + K +I R V Y LIK + F +L EM++ G P YN ++
Sbjct: 435 GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLI 494
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF---------- 388
L K + +A L EM+ P+A TY FI +F A +
Sbjct: 495 IGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVL 554
Query: 389 -------------------------FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY 423
+ MV +G+ T+ + G F + +DA +
Sbjct: 555 PNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEI 614
Query: 424 VVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHT 483
K + Y +L + K N A ++ EM++ GL PNV +Y +L
Sbjct: 615 FREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCR 674
Query: 484 SHQEHMAKCLSSRYS 498
S + AK L S
Sbjct: 675 SGEIEKAKELLDEMS 689
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 71/176 (40%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y I +F + EMR+ G P + ++ CK + +AC M+
Sbjct: 525 YGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMV 584
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ DA TY + + + K D A F +M +G+ P + ++ I G+ +
Sbjct: 585 DQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQ 644
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
A ++ + + ++Y++L ++ AK +L EM GL PN Y
Sbjct: 645 KASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTY 700
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 85/202 (42%), Gaps = 10/202 (4%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ CR D + + ++ GC T +N ++ + K G+ E+L ++
Sbjct: 735 YTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNALINWVFKFGKTELKTEVLNRLM 793
Query: 359 G----RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
R P+ +TY I I Y C+ G + A F+QM L P + T+ + + GY
Sbjct: 794 DGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKM 853
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM-----MKNGLRP 469
R + + + +++YS++ + K A ++ +M + +G +
Sbjct: 854 GRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKL 913
Query: 470 NVSVYRRVLKHLHTSHQEHMAK 491
++S R +L + +A+
Sbjct: 914 SISTCRALLSGFAKVGEMEVAE 935
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 49/132 (37%), Gaps = 21/132 (15%)
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKF---------------------DVAFNFFNQMVKR 395
M+ RN D TY + I+ CR G D A M+ +
Sbjct: 212 MVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICK 271
Query: 396 GLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMA 455
GL P T+ I G R EDA +V S N YSLL K N A
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 456 KNVLSEMMKNGL 467
K ++ EM+ +G+
Sbjct: 332 KGLVHEMVSHGI 343
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 62/126 (49%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ++K MC D G +++ EM GC P + Y ++ +N + DA +L+EM
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD Y I+ + + D A +F +MV+ GL+P T+ AFI GY +
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFA 539
Query: 419 DAYKYV 424
A KYV
Sbjct: 540 SADKYV 545
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 94/218 (43%), Gaps = 14/218 (6%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI FS LG + A + + + V YN+L+ CR + + ++LL EM G
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
P +TY ++ CK+G A+A L +EM + PD+ Y + CR+ + A
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAI 752
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL------SADKYKSSSNMLYS 440
F K+G A A I F F + E K VL S D++ +++ Y+
Sbjct: 753 TIFGTN-KKGCASSTAPFNALINWVFKFGKTE--LKTEVLNRLMDGSFDRFGKPNDVTYN 809
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
++ K N AK + +M L P V Y +L
Sbjct: 810 IMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLL 847
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 9/214 (4%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +LI + + + + EM + G P + YN +LG C++G+ A ELL+EM
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS 689
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ HP+A+TY I C+ G AF F++M +GL P + + G R
Sbjct: 690 VKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC---CRLN 746
Query: 419 DAYKYVVLSADKYK--SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL----RPNVS 472
D + + + K +SS ++ L + K + VL+ +M +PN
Sbjct: 747 DVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDV 806
Query: 473 VYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
Y ++ +L AK L + + +L +V
Sbjct: 807 TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTV 840
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 87/182 (47%), Gaps = 2/182 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE-LLEEM 357
Y++LI +C+ + + LLVEM +G TY+ ++ L K G++ADA + L+ EM
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK-GRNADAAKGLVHEM 338
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
+ + Y+ I + G + A F+ M+ GL P+ +A+ I+GY
Sbjct: 339 VSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNV 398
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
Y+ +V + S Y + + + A N++ EM+ +G RPNV +Y +
Sbjct: 399 RQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTL 458
Query: 478 LK 479
+K
Sbjct: 459 IK 460
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 94/255 (36%), Gaps = 36/255 (14%)
Query: 280 GLYEMAKYVIKKTER-KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
G Y + K +I R V Y LIK + F +L EM++ G P YN ++
Sbjct: 435 GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLI 494
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIV------------------------ 374
L K + +A L EM+ P+A TY FI
Sbjct: 495 IGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVL 554
Query: 375 -----------YSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY 423
C+ GK A + + MV +G+ T+ + G F + +DA +
Sbjct: 555 PNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEI 614
Query: 424 VVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHT 483
K + Y +L + K N A ++ EM++ GL PNV +Y +L
Sbjct: 615 FREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCR 674
Query: 484 SHQEHMAKCLSSRYS 498
S + AK L S
Sbjct: 675 SGEIEKAKELLDEMS 689
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 76/172 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI+ CR + + +LLVEM++ TY V+ +C +G A +++EM+
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI 444
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C P+ + Y I + +F A +M ++G+ P + + + I G R +
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMD 504
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
+A ++V + + Y S + + + A + EM + G+ PN
Sbjct: 505 EARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 71/176 (40%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ I M + + + L M G P Y ++ C+ ELL EM
Sbjct: 350 YDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMK 409
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
RN TY + C G D A+N +M+ G +P + + IK + R+
Sbjct: 410 KRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFG 469
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
DA + + ++ + Y+ L K A++ L EM++NGL+PN Y
Sbjct: 470 DAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTY 525
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 72/176 (40%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y I +F + EMR+ G P + ++ CK G+ +AC M+
Sbjct: 525 YGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMV 584
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ DA TY + + + K D A F +M +G+ P + ++ I G+ +
Sbjct: 585 DQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQ 644
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
A ++ + + ++Y++L ++ AK +L EM GL PN Y
Sbjct: 645 KASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTY 700
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 85/202 (42%), Gaps = 10/202 (4%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ CR D + + ++ GC T +N ++ + K G+ E+L ++
Sbjct: 735 YTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNALINWVFKFGKTELKTEVLNRLM 793
Query: 359 G----RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
R P+ +TY I I Y C+ G + A F+QM L P + T+ + + GY
Sbjct: 794 DGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKM 853
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM-----MKNGLRP 469
R + + + +++YS++ + K A ++ +M + +G +
Sbjct: 854 GRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKL 913
Query: 470 NVSVYRRVLKHLHTSHQEHMAK 491
++S R +L + +A+
Sbjct: 914 SISTCRALLSGFAKVGEMEVAE 935
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 49/132 (37%), Gaps = 21/132 (15%)
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKF---------------------DVAFNFFNQMVKR 395
M+ RN D TY + I+ CR G D A M+ +
Sbjct: 212 MVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICK 271
Query: 396 GLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMA 455
GL P T+ I G R EDA +V S N YSLL K N A
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 456 KNVLSEMMKNGL 467
K ++ EM+ +G+
Sbjct: 332 KGLVHEMVSHGI 343
>gi|343887304|dbj|BAK61850.1| PPR containing protein [Citrus unshiu]
Length = 567
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 3/219 (1%)
Query: 266 VSGVRALIEMFSVLGLYEMAKYV--IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMR 323
VS +I + +G+ E AK V + + + YN +I C++ D + R + M
Sbjct: 194 VSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGDMESARLVFDRMM 253
Query: 324 Q-VGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
C P +TY ++ CK G+ +A + + EM+ R C P+ +TY I C G+
Sbjct: 254 SGEDCLPNHVTYTTLIDGYCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRV 313
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
D A +M G + ++TH + +KG + +++ A Y+ + + Y ++
Sbjct: 314 DEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVV 373
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ K A ++L EM GL+P V + V + L
Sbjct: 374 INGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRIL 412
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 70/152 (46%), Gaps = 6/152 (3%)
Query: 266 VSGVRALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLV 320
VS +++++ V+G ++ A ++ V Y ++I C+ LL
Sbjct: 332 VSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLK 391
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV- 379
EMR G +P ++N V +L +NG+ A LL++M +C P+ ++Y I C
Sbjct: 392 EMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAK 451
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
G+ + ++M++ G ++ +KGY
Sbjct: 452 GRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGY 483
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 97/233 (41%), Gaps = 14/233 (6%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERKVSYY-NILIKEMCRRCDFKGPRDLLVEMRQVGCEP 329
A+ ++ L +A ++K + + ++ + LIK R + K + +Q+
Sbjct: 97 AITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGA 156
Query: 330 ITLTYNYVLGVLCKNGQDADACELLEEMLGRNC-HPDAITYEIFIVYSCRVGKFDVAFNF 388
+YN +LGVL + A E +++ N PD TY I C++G + A
Sbjct: 157 CLYSYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKV 216
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML-----YSLLA 443
F+ M ++P L + I G+ E A L D+ S + L Y+ L
Sbjct: 217 FDVMT---VKPNLLAYNTMINGFCKKGDMESAR----LVFDRMMSGEDCLPNHVTYTTLI 269
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSR 496
+ K AK ++EMM G RPN Y ++ L + + AK L ++
Sbjct: 270 DGYCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAK 322
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 49/127 (38%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
MAK + + VS + ++K +C F L + + P +Y V+ CK
Sbjct: 320 MAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCK 379
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
G+ +A LL+EM R P ++ G+ D A QM + P +
Sbjct: 380 IGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVS 439
Query: 404 HAAFIKG 410
+ I G
Sbjct: 440 YNTIICG 446
>gi|255660988|gb|ACU25663.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 376
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 88/184 (47%), Gaps = 2/184 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI + F+ + EM + C P +TYN ++ LCKN +A L++E+L
Sbjct: 167 YNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELL 226
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ +P ITY + C K + A +NQ+ +G +P + H I G + +
Sbjct: 227 DKGLNPGVITYSMLXKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQ 286
Query: 419 DAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
A + +++K + N++ ++ L K+ + A + + +++NGL P++ Y
Sbjct: 287 HALS-LYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNIT 345
Query: 478 LKHL 481
LK L
Sbjct: 346 LKGL 349
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 97/226 (42%)
Query: 282 YEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+E+ + + ++ R VS +NI+++ + + + M++ G ++TY ++
Sbjct: 45 FELWEMMGREGNRSVSSFNIMMRGLFDNGKVEEVIXIWELMKKSGFVEDSITYGILVHGF 104
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
CKNG + +LE + DA Y I C+ D A N M+K G +P
Sbjct: 105 CKNGYIDKSLHVLEMAEQKGGVVDAFAYSAMINGLCKEANLDRAVCVLNGMIKSGCKPNA 164
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
+ I G ++EDA + + S + + Y+ L + KN A N++ E
Sbjct: 165 HVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKE 224
Query: 462 MMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSVE 507
++ GL P V Y + K L H+ A L ++ +S V+
Sbjct: 225 LLDKGLNPGVITYSMLXKGLCLDHKVEKALQLWNQVTSKGFKPDVQ 270
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 72/176 (40%), Gaps = 3/176 (1%)
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
C D G + E+ + P + YN +L + + D EL E M+GR +
Sbjct: 1 CESGDIDGAERVYNEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWE-MMGREGNRSV 59
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
++ I + GK + + M K G T+ + G F Y D +V+
Sbjct: 60 SSFNIMMRGLFDNGKVEEVIXIWELMKKSGFVEDSITYGILVHG-FCKNGYIDKSLHVLE 118
Query: 427 SADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A++ + YS + + K N A VL+ M+K+G +PN VY ++ L
Sbjct: 119 MAEQKGGVVDAFAYSAMINGLCKEANLDRAVCVLNGMIKSGCKPNAHVYNTLINGL 174
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 61/157 (38%), Gaps = 35/157 (22%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C+ F +L+ E+ G P +TY+ + LC + + A +L ++
Sbjct: 202 YNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLXKGLCLDHKVEKALQLWNQVT 261
Query: 359 GRNCHPDAITYEIFIVYSCRVGK--------FDV-------------------------- 384
+ PD + I I C VGK FD+
Sbjct: 262 SKGFKPDVQMHNILIHGLCSVGKMQHALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIR 321
Query: 385 -AFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
A + ++++ GL+P + ++ +KG R DA
Sbjct: 322 NALVIWARILRNGLEPDIISYNITLKGLCSCNRISDA 358
>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 789
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 113/480 (23%), Positives = 199/480 (41%), Gaps = 37/480 (7%)
Query: 31 SQSYFSCNLKTLVSPKPSPIPSLNSDQFQSKPTSNPSYSFISSIGSSSFCHLTHPSCHSS 90
S SY + NL+ K S + N D + P S SF +S+ + S
Sbjct: 41 SASYSTTNLRHQTEGKYSNFGNFNDDLGKVGPGFQESLSFAASVSDGA--EEEEGSSDDD 98
Query: 91 QNLYFSNC-NGSCRSQISKLGLLTSRCISSFAMVNGPYATP--KQVSEIIELLRSGDSET 147
++L F N +GS Q ++ I+S + + + P ++V +I L + +
Sbjct: 99 ESLEFINSFHGSNDKQ--------TQNIASIEIDDSEFRHPVVREVCRLITLSSAWNPNF 150
Query: 148 ESKLLSMSVSLSNASVIEILRVLNSEKVSALCFLKYMREIMPEFYKNSDICSLVIDNCGR 207
E +L + SL + V +LR E+V AL F Y + + + + ++D +
Sbjct: 151 EGRLRHLLRSLKPSLVCAVLRSQADERV-ALNFF-YWADRQWRYSHHPLVYYTLLDVLSK 208
Query: 208 LDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLIS-SKALTKKGIWRVVEVLNQVGGSCLV 266
+ R++L + L+ +AFG V++S S+A + RV+ ++ + G +
Sbjct: 209 TKLCQGARRVLRLMTRRGIELSPEAFGC--VMVSYSRAGKLRNALRVLTLMQKAGVEPNL 266
Query: 267 SGVRALIEMFSVLG------LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLV 320
S I + V G L + + + + + YN LIK C + +L+
Sbjct: 267 SICNTTIYVL-VKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIA 325
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML-GRNCHPDAITYEIFIVYSCRV 379
+ GC P ++Y V+G LCK + L+E+M+ N PD +TY I +
Sbjct: 326 GLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKH 385
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN--- 436
G D A F + +G ++A + + R ++A V+ D Y S N
Sbjct: 386 GHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVI---DMYSRSCNPDV 442
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSR 496
+ Y+ + + AK +L +M K+G +PN Y +L L H K L +R
Sbjct: 443 VTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLC-----HSGKSLEAR 497
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 77/171 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI + + L E G + Y+ ++ C+ G+ +A L+ +M
Sbjct: 375 YNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMY 434
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R+C+PD +TY + CR+G+ D A QM K G +P ++ A + G +
Sbjct: 435 SRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSL 494
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
+A + + +S + + + + + Y ++ + A ++ EM++ G P
Sbjct: 495 EAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFP 545
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N+LI+ +C+ + L E GC + + V+ C+ G A +LE+M
Sbjct: 551 NLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYL 610
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
N HPDA+TY + G+ D A +M+ +GL P T + I Y + R +D
Sbjct: 611 SNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDD 670
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 84/189 (44%), Gaps = 8/189 (4%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V + +I C+ D + +L +M P +TY + L K G+ +A EL+
Sbjct: 582 VVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIV 641
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML + P +T+ I C+ G+ D N ++MVKR +P + I+ F
Sbjct: 642 KMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVKR--KPFRTIYNHVIEKLCDFG 699
Query: 416 RYEDAYKY---VVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
E+A K V+ +A K +N + L+ S K + A V +M + L P++
Sbjct: 700 NLEEAEKLLGKVLRTASKL--DANTCHVLMESCL-KKGVALSAYKVACQMFRRNLTPDLK 756
Query: 473 VYRRVLKHL 481
+ +V K L
Sbjct: 757 LCEKVTKKL 765
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 75/183 (40%), Gaps = 2/183 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +++ R DL EM + G P + N ++ LC+N + +A + LEE L
Sbjct: 515 YGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECL 574
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C + + + I C++G + A + M P T+ A R +
Sbjct: 575 NKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLD 634
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + +V K + + + + + + N+L M+K +P ++Y V+
Sbjct: 635 EAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVKR--KPFRTIYNHVI 692
Query: 479 KHL 481
+ L
Sbjct: 693 EKL 695
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 43/216 (19%), Positives = 86/216 (39%), Gaps = 11/216 (5%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
A+++ F LG + AK ++++ + Y L+ +C R+++ +
Sbjct: 447 AIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEH 506
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
P +TY V+ + G+ ++AC+L EM+ + P + + I C+ K A
Sbjct: 507 WWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEA 566
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKY---KSSSNMLYSLL 442
+ + + +G + I G F + D + + D Y K + Y+ L
Sbjct: 567 KKYLEECLNKGCAINVVNFTTVIHG---FCQIGDMEAALSVLEDMYLSNKHPDAVTYTAL 623
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
K A ++ +M+ GL P +R V+
Sbjct: 624 FDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVI 659
>gi|90399325|emb|CAJ86125.1| H0313F03.9 [Oryza sativa Indica Group]
Length = 466
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 57/112 (50%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+NIL+K +C+ F LL EM + GC P TY+ ++ LC++GQ A EL E M
Sbjct: 180 FNILVKGLCQFGKFDDAISLLYEMPKQGCVPNVTTYSTLMNFLCQHGQVDKAFELCERMQ 239
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ DA+ Y I I CR + AFN F MV +G P T+ + G
Sbjct: 240 KEDIAADAVVYNILISGLCREQRVTEAFNLFKSMVPKGCYPNSGTYQVLLDG 291
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 87/201 (43%), Gaps = 3/201 (1%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L+ M Y + + +Y +L +C+R ++ ++ + ++G T +N ++
Sbjct: 130 LFAMPGYNCWPSTKTFNY--VLHMLVCKR-QYEVVHEVYLSASRLGVTLDTCCFNILVKG 186
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
LC+ G+ DA LL EM + C P+ TY + + C+ G+ D AF +M K +
Sbjct: 187 LCQFGKFDDAISLLYEMPKQGCVPNVTTYSTLMNFLCQHGQVDKAFELCERMQKEDIAAD 246
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
+ I G R +A+ K ++ Y +L + V AK ++S
Sbjct: 247 AVVYNILISGLCREQRVTEAFNLFKSMVPKGCYPNSGTYQVLLDGLLSSGKFVEAKGLVS 306
Query: 461 EMMKNGLRPNVSVYRRVLKHL 481
M +RP S ++ ++ L
Sbjct: 307 MMRAERMRPGFSSFKLLIDGL 327
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 75/177 (42%)
Query: 319 LVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCR 378
L M C P T T+NYVL +L Q E+ D + I + C+
Sbjct: 130 LFAMPGYNCWPSTKTFNYVLHMLVCKRQYEVVHEVYLSASRLGVTLDTCCFNILVKGLCQ 189
Query: 379 VGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML 438
GKFD A + +M K+G P + T++ + + + A++ + ++ ++
Sbjct: 190 FGKFDDAISLLYEMPKQGCVPNVTTYSTLMNFLCQHGQVDKAFELCERMQKEDIAADAVV 249
Query: 439 YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSS 495
Y++L S + A N+ M+ G PN Y+ +L L +S + AK L S
Sbjct: 250 YNILISGLCREQRVTEAFNLFKSMVPKGCYPNSGTYQVLLDGLLSSGKFVEAKGLVS 306
>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
Length = 637
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 95/220 (43%), Gaps = 16/220 (7%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
+ Y+ L+ D G + EM+ GC+P + Y ++ VLCK A L+++
Sbjct: 363 TTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDK 422
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
ML NC P+ +T+ I C G+ A N F+ M + G P T+ + G F
Sbjct: 423 MLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGN 482
Query: 417 YEDAYKYVV--------LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLR 468
++DA+ V+ LS Y + N L + H A +L MM G++
Sbjct: 483 HKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKH--------AMLLLGRMMVQGIQ 534
Query: 469 PNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSVEA 508
P+ + ++ + +A CL + ++++ +V A
Sbjct: 535 PDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVA 574
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 104/248 (41%), Gaps = 11/248 (4%)
Query: 249 GIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKT------ERKVSYYNIL 302
G+ ++ + G +C + A I F+ G + A + + V YN L
Sbjct: 69 GVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHL 128
Query: 303 IKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNC 362
+ + R + MR+ G +P TYN ++ LC+N + A ++L+EM + C
Sbjct: 129 LDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGC 188
Query: 363 HPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
HPD +++ + C++G+ + A F + V P A++ A + +R + +
Sbjct: 189 HPDEVSHGTIVSGMCKLGRVEEARGFLAETV-----PVQASYNAVVHALCGEFRMWEVFS 243
Query: 423 YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLH 482
V + + + Y+ + K MA +L+ M+ G PNV + ++K
Sbjct: 244 VVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFF 303
Query: 483 TSHQEHMA 490
+ H A
Sbjct: 304 EDGKVHDA 311
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 96/250 (38%), Gaps = 38/250 (15%)
Query: 263 SCLVSGVRALIEMFSVLGLYEMAKYVI--------KKTERKVSYYNILIKEMCRRCDFKG 314
C GVR + L M V+ + V YN+LI+ +C+
Sbjct: 116 GCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDA 175
Query: 315 PRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA---------------------C-- 351
R +L EM + GC P +++ ++ +CK G+ +A C
Sbjct: 176 ARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGE 235
Query: 352 -------ELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
++ EM+ R P+ +TY + C+ + +A +MV G P + T
Sbjct: 236 FRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTF 295
Query: 405 AAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMK 464
A +KG+F + DA D+ + S + Y++L + A + + M +
Sbjct: 296 TALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKR 355
Query: 465 NGLRPNVSVY 474
N L PN + Y
Sbjct: 356 NALLPNATTY 365
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 5/140 (3%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPIT 331
+ E+FSV+ + V + + V Y ++ C+ + + +L M +GC P
Sbjct: 238 MWEVFSVVN-----EMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNV 292
Query: 332 LTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQ 391
LT+ ++ ++G+ DA + M+ P I+Y + I C +G A +FFN
Sbjct: 293 LTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNS 352
Query: 392 MVKRGLQPRLATHAAFIKGY 411
M + L P T++ + G+
Sbjct: 353 MKRNALLPNATTYSTLVDGF 372
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 79/184 (42%), Gaps = 6/184 (3%)
Query: 324 QVGC-EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
+GC +P YN++L L + + + M P+ TY + I C+ +
Sbjct: 114 DLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRV 173
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
D A ++M ++G P +H + G R E+A ++ + S + ++++L
Sbjct: 174 DAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALC 233
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSL 502
+V++EM++ GL+PNV Y ++ + + MA + +R S+
Sbjct: 234 GEFRMWE-----VFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGC 288
Query: 503 GSSV 506
+V
Sbjct: 289 TPNV 292
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E + YN +I +C+ C K LL M G +P T+N ++ CK G+ + A
Sbjct: 499 ELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAAC 558
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
LL +M NC + + Y I I C GK A + +M+ G+ P AT ++ F
Sbjct: 559 LLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIF 618
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 62/126 (49%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ++K MC D G +++ EM GC P + Y ++ +N + DA +L+EM
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD Y I+ + + D A +F +MV+ GL+P T+ AFI GY +
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFA 539
Query: 419 DAYKYV 424
A KYV
Sbjct: 540 SADKYV 545
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 94/218 (43%), Gaps = 14/218 (6%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI FS LG + A + + + V YN+L+ CR + + ++LL EM G
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
P +TY ++ CK+G A+A L +EM + PD+ Y + CR+ + A
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAI 752
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL------SADKYKSSSNMLYS 440
F K+G A A I F F + E K VL S D++ +++ Y+
Sbjct: 753 TIFGTN-KKGCASSTAPFNALINWVFKFGKTE--LKTEVLNRLMDGSFDRFGKPNDVTYN 809
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
++ K N AK + +M L P V Y +L
Sbjct: 810 IMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLL 847
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 9/214 (4%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +LI + + + + EM + G P + YN +LG C++G+ A ELL+EM
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS 689
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ HP+A+TY I C+ G AF F++M +GL P + + G R
Sbjct: 690 VKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC---CRLN 746
Query: 419 DAYKYVVLSADKYK--SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL----RPNVS 472
D + + + K +SS ++ L + K + VL+ +M +PN
Sbjct: 747 DVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDV 806
Query: 473 VYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
Y ++ +L AK L + + +L +V
Sbjct: 807 TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTV 840
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 87/182 (47%), Gaps = 2/182 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE-LLEEM 357
Y++LI +C+ + + LLVEM +G TY+ ++ L K G++ADA + L+ EM
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK-GRNADAAKGLVHEM 338
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
+ + Y+ I + G + A F+ M+ GL P+ +A+ I+GY
Sbjct: 339 VSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNV 398
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
Y+ +V + S Y + + + A N++ EM+ +G RPNV +Y +
Sbjct: 399 RQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTL 458
Query: 478 LK 479
+K
Sbjct: 459 IK 460
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 94/255 (36%), Gaps = 36/255 (14%)
Query: 280 GLYEMAKYVIKKTER-KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
G Y + K +I R V Y LIK + F +L EM++ G P YN ++
Sbjct: 435 GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLI 494
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIV------------------------ 374
L K + +A L EM+ P+A TY FI
Sbjct: 495 IGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVL 554
Query: 375 -----------YSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY 423
C+ GK A + + MV +G+ T+ + G F + +DA +
Sbjct: 555 PNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEI 614
Query: 424 VVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHT 483
K + Y +L + K N A ++ EM++ GL PNV +Y +L
Sbjct: 615 FREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCR 674
Query: 484 SHQEHMAKCLSSRYS 498
S + AK L S
Sbjct: 675 SGEIEKAKELLDEMS 689
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 76/172 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI+ CR + + +LLVEM++ TY V+ +C +G A +++EM+
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI 444
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C P+ + Y I + +F A +M ++G+ P + + + I G R +
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMD 504
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
+A ++V + + Y S + + + A + EM + G+ PN
Sbjct: 505 EARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 71/176 (40%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ I M + + + L M G P Y ++ C+ ELL EM
Sbjct: 350 YDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMK 409
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
RN TY + C G D A+N +M+ G +P + + IK + R+
Sbjct: 410 KRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFG 469
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
DA + + ++ + Y+ L K A++ L EM++NGL+PN Y
Sbjct: 470 DAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTY 525
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 72/176 (40%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y I +F + EMR+ G P + ++ CK G+ +AC M+
Sbjct: 525 YGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMV 584
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ DA TY + + + K D A F +M +G+ P + ++ I G+ +
Sbjct: 585 DQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQ 644
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
A ++ + + ++Y++L ++ AK +L EM GL PN Y
Sbjct: 645 KASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTY 700
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 85/202 (42%), Gaps = 10/202 (4%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ CR D + + ++ GC T +N ++ + K G+ E+L ++
Sbjct: 735 YTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNALINWVFKFGKTELKTEVLNRLM 793
Query: 359 G----RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
R P+ +TY I I Y C+ G + A F+QM L P + T+ + + GY
Sbjct: 794 DGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKM 853
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM-----MKNGLRP 469
R + + + +++YS++ + K A ++ +M + +G +
Sbjct: 854 GRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKL 913
Query: 470 NVSVYRRVLKHLHTSHQEHMAK 491
++S R +L + +A+
Sbjct: 914 SISTCRALLSGFAKVGEMEVAE 935
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 49/132 (37%), Gaps = 21/132 (15%)
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKF---------------------DVAFNFFNQMVKR 395
M+ RN D TY + I+ CR G D A M+ +
Sbjct: 212 MVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICK 271
Query: 396 GLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMA 455
GL P T+ I G R EDA +V S N YSLL K N A
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 456 KNVLSEMMKNGL 467
K ++ EM+ +G+
Sbjct: 332 KGLVHEMVSHGI 343
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 84/186 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI CR+ + +L+ M G +P TYN ++ LCK G+ A +L+
Sbjct: 289 VVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLD 348
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EML PD TY I +V CR A F++M +G+ P L + +A I
Sbjct: 349 EMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNG 408
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ A KY + + N++Y++L +N A V EM++ G +V Y
Sbjct: 409 CLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYN 468
Query: 476 RVLKHL 481
+L L
Sbjct: 469 TILNGL 474
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 72/172 (41%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ILI C L EM + G E +T N ++ C+ G A E L ML
Sbjct: 572 YGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNML 631
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD ITY I + D AF N+M GL P + T+ + G+ R +
Sbjct: 632 LKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQ 691
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
+A ++ ++ + Y+ L + H NN A V EM++ G P+
Sbjct: 692 EAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 743
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 84/199 (42%), Gaps = 2/199 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN ++ +C+ +L EM + G P T+ ++ K+G A L E
Sbjct: 464 VVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFE 523
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+ RN PD +TY I C+ + + +N M+ R + P ++ I GY
Sbjct: 524 MMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMG 583
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+A++ +K ++ + + + + + N V A LS M+ G+ P+ Y
Sbjct: 584 CVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYN 643
Query: 476 RVLKHLHTSHQEHMAKCLS 494
++ +E+M + +
Sbjct: 644 TLINGF--IKEENMDRAFA 660
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M+ G P + Y ++G C+NG ++A ++ +EML + C D +TY + C+
Sbjct: 419 DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEK 478
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
A F +M +RG+ P T I GY
Sbjct: 479 MLSEADELFTEMTERGVFPDFYTFTTLINGY 509
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 60/137 (43%)
Query: 286 KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNG 345
+ V K E + N ++K CR + + L M G P +TYN ++ K
Sbjct: 594 EMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEE 653
Query: 346 QDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
A L+ +M PD ITY + + R G+ A +M++RG+ P +T+
Sbjct: 654 NMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYT 713
Query: 406 AFIKGYFIFYRYEDAYK 422
+ I G+ ++A++
Sbjct: 714 SLINGHVTQNNLKEAFR 730
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 85/179 (47%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L EM++ P +TYN ++G LC +G+ + + L E+L PD TY I+ C
Sbjct: 514 LWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYC 573
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
R G+ + AF F N+MVK+ +P L T ++G + A K K K+ +
Sbjct: 574 REGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAV 633
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSR 496
Y+ + S K + A ++L+EM + L P+ Y +L L + + A+ SR
Sbjct: 634 TYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSR 692
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++ +C++ RDLL++M+ G P T+N ++ CK G +A ++++ M
Sbjct: 250 YNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMA 309
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
N PD TY + I C+ GK D AF ++M L P + T+ I G F
Sbjct: 310 QNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSL 369
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
++ + K + + Y+++ + K A N L +M ++G P+ + ++
Sbjct: 370 KGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLI 429
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 1/151 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN+LI +C+ L EM + P +TYN ++ EL++
Sbjct: 317 VWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELID 376
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M G+ P+A+TY + + + + GK D A N +M + G P T I GY
Sbjct: 377 KMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAG 436
Query: 416 RYEDAYKYV-VLSADKYKSSSNMLYSLLASL 445
R +A++ + +S K +S L ++L +L
Sbjct: 437 RLSEAFRMMDEMSRKGLKMNSVTLNTILHTL 467
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 64/150 (42%), Gaps = 1/150 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I +C D L E+ + G P TYN ++ C+ GQ A + +M+
Sbjct: 530 YNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMV 589
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
++ PD T I + C G D A FN + +G T+ I G R+E
Sbjct: 590 KKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFE 649
Query: 419 DAYKYVVLSADKYKSSSNMLY-SLLASLHD 447
+A+ + +K Y ++L++L D
Sbjct: 650 EAFDLLAEMEEKKLGPDCYTYNAILSALAD 679
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 85/182 (46%), Gaps = 4/182 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+++K + + L +M + G P +T+N ++ CK G+ ++A +++EM
Sbjct: 390 YNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMS 449
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ +++T + C K D A+ + KRG ++ I GYF +
Sbjct: 450 RKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSV 509
Query: 419 DAYKYVVLSADKYKSSSNMLY-SLLASL-HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
+A K +K S + Y +++ L H + + K L+E++++GL P+ + Y
Sbjct: 510 EAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDK--LNELLESGLVPDETTYNT 567
Query: 477 VL 478
++
Sbjct: 568 II 569
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 63/160 (39%), Gaps = 35/160 (21%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLC---------------- 342
+N LI C+ ++ EM + G + ++T N +L LC
Sbjct: 425 FNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSAS 484
Query: 343 -------------------KNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
K+G+ +A +L +EM + P ITY I C GK D
Sbjct: 485 KRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTD 544
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY 423
+ + N++++ GL P T+ I GY + E A+++
Sbjct: 545 QSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQF 584
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 66/155 (42%)
Query: 324 QVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
++G + T T+N ++ C + ++A L+ +M +C PD ++Y + C+ GK +
Sbjct: 205 KLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLN 264
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
A + M GL P T + GY ++A + + L A Y++L
Sbjct: 265 EARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLI 324
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
K+ A + EM L P+V Y ++
Sbjct: 325 GGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLI 359
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 56/135 (41%), Gaps = 23/135 (17%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I +C+ F+ DLL EM + P TYN +L L G+ +A E + ++
Sbjct: 635 YNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIV 694
Query: 359 GRN-----------------------CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR 395
+ P+++T+ I C GK+ A + + ++
Sbjct: 695 EQGKLQDQTISLNKRKIESSSETSQESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQK 754
Query: 396 GLQPRLATHAAFIKG 410
G+ +T+ + ++G
Sbjct: 755 GITLHKSTYISLMEG 769
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 34/244 (13%)
Query: 199 SLVIDN---CGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALT----KKGIW 251
S++ID CGR D+ R+L + KA G +P +IS +L + G W
Sbjct: 643 SIIIDGLCKCGREDEA---RELFKEM---------KALGVIPDVISYTSLIHGFCRSGKW 690
Query: 252 RVVEVL----NQVGGSCLVSGVRALIEMF----SVLGLYEMAKYVIKKT-ERKVSYYNIL 302
+ + L +G V+ LI+M V+ E+ + +I++ Y L
Sbjct: 691 KDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTL 750
Query: 303 IKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML---- 358
+K +C L ++M+++GC P +TY ++ LC+ G A EL ++ML
Sbjct: 751 VKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTG 810
Query: 359 --GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
G N PD I+Y I I C+ G+ D A F +M G+ P + ++ + I G+ +
Sbjct: 811 QYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGK 870
Query: 417 YEDA 420
EDA
Sbjct: 871 LEDA 874
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 88/189 (46%), Gaps = 6/189 (3%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y LI CR +K + L EM +G +P T++ ++ +LCK G+ +A ELLE
Sbjct: 674 VISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLE 733
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+ R C P+ +TY + C + A F +M K G P + T+ +KG
Sbjct: 734 VMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTG 793
Query: 416 RYEDA---YKYVVLSADKYKSS---SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
+ A +K ++ +Y ++ + YS++ K+ A+ + EM G+ P
Sbjct: 794 NIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIP 853
Query: 470 NVSVYRRVL 478
NV Y ++
Sbjct: 854 NVISYTSLI 862
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 122/285 (42%), Gaps = 24/285 (8%)
Query: 225 QVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEM 284
Q+ L + G +P +++ L K G C ++ +E+ + L +
Sbjct: 584 QLFLKMQKLGCMPNVVTCATLMK--------------GLCQSGNIKIALELHKNM-LSDT 628
Query: 285 AKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKN 344
+ Y I +SY +I+I +C+ R+L EM+ +G P ++Y ++ C++
Sbjct: 629 SPYGINCKPNAISY-SIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRS 687
Query: 345 GQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
G+ DA L EM+ PD T+ + I C+ GK A M++RG P T+
Sbjct: 688 GKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTY 747
Query: 405 AAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY--SLLASLHDKNNNPV---MAKNVL 459
+KG + R +A + + + K +++ +L+ L N + K +L
Sbjct: 748 TTLVKGLCMNDRISEATQ-LFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKML 806
Query: 460 SEMMKNG--LRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSL 502
S+ + G +P+V Y ++ L +E A+ L +L +
Sbjct: 807 SDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGV 851
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 90/198 (45%), Gaps = 6/198 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQ------VGCEPITLTYNYVLGVLCKNGQDADACE 352
Y L+K +C+ + L EM + C+P ++Y+ ++ LCK+ ++ +A E
Sbjct: 127 YGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARE 186
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
L +EM + PD I+Y I C GK++ A FN+M+ G+QP + T I +
Sbjct: 187 LFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFC 246
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
+ +A + + + + + YS L + A + M K G RP+
Sbjct: 247 KEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAI 306
Query: 473 VYRRVLKHLHTSHQEHMA 490
Y ++K L + + ++A
Sbjct: 307 AYGTLMKGLCQTGKINIA 324
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 84/202 (41%), Gaps = 15/202 (7%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y LI C ++ + L EM VG +P T ++ + CK G+ +A ELLE
Sbjct: 200 VISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLE 259
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY---- 411
M+ R C D +TY I C + A F M K G +P + +KG
Sbjct: 260 VMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTG 319
Query: 412 ---FIFYRYE----DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMK 464
+ ++ D +Y + ++S+ML +L K + A +L M++
Sbjct: 320 KINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILC----KEGKVIEANELLEVMIQ 375
Query: 465 NGLRPNVSVYRRVLKHLHTSHQ 486
G ++ Y ++K L H+
Sbjct: 376 RGCILDIVTYSTLIKGLCMEHR 397
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 6/116 (5%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQ------VGCEPITLTYNYVLGVLCKNGQDADACE 352
Y L+K +C+ + L EM + C+P ++Y+ ++ LCK+ ++ +A E
Sbjct: 420 YGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARE 479
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
L EEM + PD I+Y I C GK++ A FN+M+ G+QP + T + I
Sbjct: 480 LFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLI 535
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 9/229 (3%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L + +Y IK +SY +I+I +C+ R+L EM+ G P ++Y ++
Sbjct: 444 LNDTGRYGIKCKPTLISY-SIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHG 502
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
C +G+ A L EML PD T + I C+ GK A +++RG
Sbjct: 503 FCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILD 562
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY--SLLASLHDKNNNPV---MA 455
+ T +KG + +R A + + L K N++ +L+ L N + +
Sbjct: 563 VVTCTTLVKGLCMKHRISKATQ-LFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELH 621
Query: 456 KNVLSEMMKNGL--RPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSL 502
KN+LS+ G+ +PN Y ++ L +E A+ L +L +
Sbjct: 622 KNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGV 670
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 6/171 (3%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P T + ++ +LCK G+ +A ELLE M+ R C D +TY I C + A
Sbjct: 52 PDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWL 111
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA---YKYVVLSADKY--KSSSNML-YSLL 442
F M K G +P T+ +KG A ++ ++ +Y K ++ YS++
Sbjct: 112 FMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSII 171
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
K+ A+ + EM G+ P+V Y ++ S + AKCL
Sbjct: 172 IDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCL 222
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 90/198 (45%), Gaps = 6/198 (3%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L + ++Y IK V+ ++LI +C+ +LL M Q GC +TY+ ++
Sbjct: 332 LNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKG 391
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV----KRG 396
LC + ++A L M C PDAITY + C+ G ++A +M+ + G
Sbjct: 392 LCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYG 451
Query: 397 L--QPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM 454
+ +P L +++ I G R ++A + + + Y+ L +
Sbjct: 452 IKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEK 511
Query: 455 AKNVLSEMMKNGLRPNVS 472
AK + +EM+ G++P+V+
Sbjct: 512 AKCLFNEMLDVGIQPDVT 529
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 83/183 (45%), Gaps = 6/183 (3%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V+ ++LI +C+ +LL M Q GC +TY+ ++ LC + ++A L
Sbjct: 54 VTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFM 113
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV----KRGL--QPRLATHAAFIK 409
M C PDAITY + C+ G ++A +M+ + G+ +P L +++ I
Sbjct: 114 SMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIID 173
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
G R ++A + + + Y+ L + AK + +EM+ G++P
Sbjct: 174 GLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQP 233
Query: 470 NVS 472
+V+
Sbjct: 234 DVT 236
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+I+I +C+ R+L EM+ +G P ++Y ++ C++G+ DA L
Sbjct: 820 VISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFN 879
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
EM+ + +A+TY + I C+ G+ D A F +M
Sbjct: 880 EMVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKM 914
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 76/186 (40%), Gaps = 17/186 (9%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEI---------F 372
MR G P + T+N ++ LC + + + ++ R PD +TY I
Sbjct: 1 MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60
Query: 373 IVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYK 432
I C+ GK A M++RG + T++ IKG + +R +A ++ +S K
Sbjct: 61 IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEA-TWLFMSMQKLG 119
Query: 433 SSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLR------PNVSVYRRVLKHLHTSH 485
+ + Y L + N +A + EM+ + R P + Y ++ L
Sbjct: 120 CRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDR 179
Query: 486 QEHMAK 491
+E A+
Sbjct: 180 REDEAR 185
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 81/183 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +IK C D K ++ M Q G +TYN ++ C +G A +L+ M
Sbjct: 428 YNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMR 487
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C PD +Y I C++ K + AF FN+MV GL P T+ A I GY + +
Sbjct: 488 DGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLD 547
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + + Y++L K NN A+ + M++ G+ PNV Y ++
Sbjct: 548 TATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMI 607
Query: 479 KHL 481
L
Sbjct: 608 DGL 610
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 68/129 (52%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN+LI + ++ +F G +L M + G P +TY ++ LCKNG + A E+
Sbjct: 565 VQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFN 624
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M+ + C P+ +TY I + GK + A N F ++ + GL P T+ I+ Y +
Sbjct: 625 KMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSG 684
Query: 416 RYEDAYKYV 424
+ E A+ ++
Sbjct: 685 KVEHAFNFL 693
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 78/187 (41%), Gaps = 20/187 (10%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M G +P L YN V+ LCK+G ADA +++++ PD TY I+ CR
Sbjct: 206 MLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHD 265
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
D A FNQM K G +P T++ I G R +A+ + +L+ +
Sbjct: 266 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLI---------REMILHGI 316
Query: 442 LASLHDKNNNPVM----------AKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
L + H P++ A + +M G PNV Y ++ L S +A
Sbjct: 317 LPTAH-TCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAI 375
Query: 492 CLSSRYS 498
L R S
Sbjct: 376 GLFHRMS 382
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 92/218 (42%), Gaps = 4/218 (1%)
Query: 265 LVSGVRALIEMFSVLGLY-EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMR 323
L+ G + +M S GL+ EM + E Y LI C+ LL M+
Sbjct: 501 LICGFCKISKMESAFGLFNEMVDDGLCPNE---VTYTALIDGYCKDEKLDTATSLLEHMK 557
Query: 324 QVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
+ GC P TYN ++ L K + A EL + M+ P+ +TY I C+ G
Sbjct: 558 RSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTS 617
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
+A FN+M+++G P L T+++ I+ + E+A + Y +
Sbjct: 618 LALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMI 677
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + A N L M+K G +P + Y ++K L
Sbjct: 678 EAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 715
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 90/218 (41%), Gaps = 39/218 (17%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +I CR+ D + +M + GCEP T+TY+ ++ LC +G+ +A +L+ EM+
Sbjct: 253 YTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMI 312
Query: 359 -----------------------------------GRNCHPDAITYEIFIVYSCRVGKFD 383
+ C P+ TY I C G
Sbjct: 313 LHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLK 372
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLS-ADKYKSSSNML-YSL 441
VA F++M + G+ P T+ A I + Y +VVL+ + S N++ Y+
Sbjct: 373 VAIGLFHRMSRDGVFPNTVTYNALIN--ILVENRRIKYAFVVLNLMGRNGCSPNIVTYNE 430
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
+ + +P A V++ M++ G N+ Y ++K
Sbjct: 431 MIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIK 468
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 215 RQLLNDFNVYQVCLNEKAFGFLPVLISSKALT----KKGIWRVVEVL-----------NQ 259
R+ +ND Q LNE G LP +++ AL K G+ E+L NQ
Sbjct: 585 REFMNDLQGEQQKLNEIE-GCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQ 643
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+C + + + + + L+++ +++ YNILI+ C+ + ++L
Sbjct: 644 NTYACFLDYLTSEGNIEKAIQLHDV---LLEGFLANTVTYNILIRGFCKLGRIQEAAEVL 700
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
V M G P ++Y+ ++ C+ G +A +L E ML R +PD + Y I C
Sbjct: 701 VNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVT 760
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
G+ AF + M++RG++P AT+ + I G
Sbjct: 761 GELTKAFELRDDMMRRGVKPNRATYNSLIHG 791
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 122/319 (38%), Gaps = 67/319 (21%)
Query: 198 CSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVL 257
C+LV+ C +++++E +++N+ FGF+P
Sbjct: 289 CTLVLGLC-KVEEFEAGEEMMNEM---------IEFGFVP-------------------- 318
Query: 258 NQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDF----- 312
++ S LV G+R + S L K + YN LI MC+
Sbjct: 319 SEAAVSNLVDGLRKKGNIGSAFDLVNKVKKF--GVAPSLFVYNALINSMCKDGKLDEAES 376
Query: 313 -------KG--PRDL---------------------LVEMRQVGCEPITLTYNYVLGVLC 342
KG P D+ L +M +VG + Y+ ++ C
Sbjct: 377 LFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHC 436
Query: 343 KNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLA 402
K G+ A L +EM+ P+ + Y I C+ G+ AF +++M +G+ P
Sbjct: 437 KLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTY 496
Query: 403 THAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM 462
T A I G R +A K + + + Y++L H K N V A +L EM
Sbjct: 497 TFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEM 556
Query: 463 MKNGLRPNVSVYRRVLKHL 481
++ GL P+ YR ++ L
Sbjct: 557 VEKGLVPDTYTYRPLISGL 575
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 8/165 (4%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+ G C + +RA +F EM +K V Y LI C+ + L
Sbjct: 432 ISGHCKLGKLRAAKSLFD-----EMIANGLKP---NVVIYTSLISGYCKEGELHNAFRLY 483
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
EM G P T T+ ++ LC + A+A +L EM+ N P+ +TY + I C+
Sbjct: 484 HEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKE 543
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV 424
G AF ++MV++GL P T+ I G R +A +++
Sbjct: 544 GNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFM 588
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 77/179 (43%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y +++ +C DF R+++ M GC+ TYN + LCKN + +A E+
Sbjct: 215 VYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKN 274
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ + D TY ++ C+V +F+ N+M++ G P A + + G
Sbjct: 275 LLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKG 334
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
A+ V + S +Y+ L + K+ A+++ + M GL PN Y
Sbjct: 335 NIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTY 393
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 57/148 (38%), Gaps = 35/148 (23%)
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN 390
T+TYN ++ CK G+ +A E+L M+ PD I+Y I CR G A +
Sbjct: 677 TVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWE 736
Query: 391 QMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNN 450
M+ RG+ P + I G + A++ L D
Sbjct: 737 SMLNRGVNPDTVAYNFLIYGCCVTGELTKAFE----------------------LRD--- 771
Query: 451 NPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+MM+ G++PN + Y ++
Sbjct: 772 ----------DMMRRGVKPNRATYNSLI 789
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 81/183 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +IK C D K ++ M Q G +TYN ++ C +G A +L+ M
Sbjct: 428 YNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMR 487
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C PD +Y I C++ K + AF FN+MV GL P T+ A I GY + +
Sbjct: 488 DGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLD 547
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + + Y++L K NN A+ + M++ G+ PNV Y ++
Sbjct: 548 TATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMI 607
Query: 479 KHL 481
L
Sbjct: 608 DGL 610
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 68/129 (52%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN+LI + ++ +F G +L M + G P +TY ++ LCKNG + A E+
Sbjct: 565 VQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFN 624
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M+ + C P+ +TY I + GK + A N F ++ + GL P T+ I+ Y +
Sbjct: 625 KMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSG 684
Query: 416 RYEDAYKYV 424
+ E A+ ++
Sbjct: 685 KVEHAFNFL 693
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 78/187 (41%), Gaps = 20/187 (10%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M G +P L YN V+ LCK+G ADA +++++ PD TY I+ CR
Sbjct: 206 MLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHD 265
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
D A FNQM K G +P T++ I G R +A+ + +L+ +
Sbjct: 266 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLI---------REMILHGI 316
Query: 442 LASLHDKNNNPVM----------AKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
L + H P++ A + +M G PNV Y ++ L S +A
Sbjct: 317 LPTAH-TCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAI 375
Query: 492 CLSSRYS 498
L R S
Sbjct: 376 GLFHRMS 382
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 92/218 (42%), Gaps = 4/218 (1%)
Query: 265 LVSGVRALIEMFSVLGLY-EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMR 323
L+ G + +M S GL+ EM + E Y LI C+ LL M+
Sbjct: 501 LICGFCKISKMESAFGLFNEMVDDGLCPNE---VTYTALIDGYCKDEKLDTATSLLEHMK 557
Query: 324 QVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
+ GC P TYN ++ L K + A EL + M+ P+ +TY I C+ G
Sbjct: 558 RSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTS 617
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
+A FN+M+++G P L T+++ I+ + E+A + Y +
Sbjct: 618 LALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMI 677
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + A N L M+K G +P + Y ++K L
Sbjct: 678 EAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 715
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 90/218 (41%), Gaps = 39/218 (17%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +I CR+ D + +M + GCEP T+TY+ ++ LC +G+ +A +L+ EM+
Sbjct: 253 YTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMI 312
Query: 359 -----------------------------------GRNCHPDAITYEIFIVYSCRVGKFD 383
+ C P+ TY I C G
Sbjct: 313 LHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILK 372
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLS-ADKYKSSSNML-YSL 441
VA F++M + G+ P T+ A I + Y +VVL+ + S N++ Y+
Sbjct: 373 VAIGLFHRMSRDGVFPNTVTYNALIN--ILVENRRIKYAFVVLNLMGRNGCSPNIVTYNE 430
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
+ + +P A V++ M++ G N+ Y ++K
Sbjct: 431 MIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIK 468
>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 80/183 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+NIL+K +CR + LL EMR+ P +YN V+ C+ + A EL EM
Sbjct: 145 HNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMK 204
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
G C +T+ I I C+ GK D A F +M GL+ L + + I+G+ +
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELD 264
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
++ S + Y+ L K A + M++ G+RPNV Y ++
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLI 324
Query: 479 KHL 481
L
Sbjct: 325 DGL 327
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 108/253 (42%), Gaps = 10/253 (3%)
Query: 248 KGIWRVVEVLNQVGGS-CLVSGVR--ALIEMFSVLGLYEMAKYVIKKT-----ERKVSYY 299
K + + +E+ N++ GS C S V LI+ F G + A +K+ E + Y
Sbjct: 191 KELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVY 250
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
LI+ C + + L E+ + G P +TYN ++ CK GQ +A E+ E M+
Sbjct: 251 TSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIE 310
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
R P+ TY I C VGK A N M+++ +P T+ I D
Sbjct: 311 RGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVAD 370
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNG--LRPNVSVYRRV 477
A + V L + N+ Y++L + A +L M+K+ P+V Y +
Sbjct: 371 AVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNAL 430
Query: 478 LKHLHTSHQEHMA 490
+ L ++ H A
Sbjct: 431 IHGLCKENRLHQA 443
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 56/133 (42%)
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
K R Y +I C+ + LL +MR +P YN +L LCK G A
Sbjct: 489 KIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQA 548
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
L EEM N PD +++ I I S + G A + M + GL P L T++ I
Sbjct: 549 WRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINR 608
Query: 411 YFIFYRYEDAYKY 423
+ ++A +
Sbjct: 609 FLKLGYLDEAISF 621
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 8/156 (5%)
Query: 252 RVVEVLNQVGGSCLV---SGVRALIEMFSVLGLYEMAKYV-----IKKTERKVSYYNILI 303
+ +E+ Q+ S +V A+I+ F G+ +AK + + + + V YN L+
Sbjct: 477 KAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLL 536
Query: 304 KEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH 363
+C+ L EM++ P +++N ++ K G A LL M
Sbjct: 537 SSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLS 596
Query: 364 PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
PD TY I ++G D A +FF++MV G +P
Sbjct: 597 PDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEP 632
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 8/118 (6%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVG--CEPITLTYNYVLGVLCKNG---QDADACEL 353
YNIL+ +C + D LL M + +P ++YN ++ LCK Q D +L
Sbjct: 390 YNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDL 449
Query: 354 LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
L E LG D +T I + + + G + A + Q+ + T+ A I G+
Sbjct: 450 LVEKLGAG---DRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGF 504
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 90/192 (46%), Gaps = 1/192 (0%)
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
K E V YN +I +C+ DL +M G +P TYN ++ LC G+ +DA
Sbjct: 245 KIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDA 304
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK-RGLQPRLATHAAFIK 409
LL +ML +N +PD + + I + GK A +++MVK + P + + IK
Sbjct: 305 SRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIK 364
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
G+ + R E+ + + + + + Y+ L + + A+ V +M+ +G+ P
Sbjct: 365 GFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP 424
Query: 470 NVSVYRRVLKHL 481
++ Y +L L
Sbjct: 425 DIMTYNILLDGL 436
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 1/163 (0%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L+ M GC+P +TY V+ LCK G+ A LL +M D + Y I C
Sbjct: 202 LVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLC 261
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ D AF+ FN+M +G++P + T+ I + R+ DA + + +K + +
Sbjct: 262 KYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLV 321
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNG-LRPNVSVYRRVLK 479
++ L K V A+ + EM+K+ P+V Y ++K
Sbjct: 322 FFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIK 364
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 77/184 (41%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI + D + + +M G P +TYN +L LC NG A + E M
Sbjct: 394 YTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQ 453
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R+ D +TY I C+ GK + ++ F + +G++P + T+ + G+ E
Sbjct: 454 KRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKE 513
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A V + ++ Y+ L ++ + + ++ EM G + S + V
Sbjct: 514 EADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVT 573
Query: 479 KHLH 482
LH
Sbjct: 574 NMLH 577
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 78/161 (48%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L+ +M ++G +P T+T+ ++ L ++ + ++A L+E M+ + C PD +TY I C
Sbjct: 167 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 226
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ G+ D+A N N+M K ++ + + I G + +DA+ K
Sbjct: 227 KRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVF 286
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
Y+ L S A +LS+M++ + P++ + ++
Sbjct: 287 TYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALI 327
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 93/216 (43%), Gaps = 8/216 (3%)
Query: 271 ALIEMFSVLG-LYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQ 324
ALI+ F G L E K + + K V YN LIK C+ + ++ EM Q
Sbjct: 325 ALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQ 384
Query: 325 VGCEPITLTYNYVLGVLCKNGQDADACELL-EEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
G T+TY ++ + +D D +++ ++M+ HPD +TY I + C G +
Sbjct: 385 RGLVGNTVTYTTLIHGFFQ-ARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVE 443
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
A F M KR ++ + T+ I+ + ED + + K + + Y+ +
Sbjct: 444 TALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMM 503
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
S + A + EM ++G PN Y +++
Sbjct: 504 SGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIR 539
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 72/183 (39%), Gaps = 35/183 (19%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+I I CRR +L +M ++G P +T N +L C + ++A L+++M+
Sbjct: 113 YSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 172
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD +T+ + + K A +MV +G QP L T+ A I G
Sbjct: 173 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC------ 226
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
K P +A N+L++M K + +V +Y ++
Sbjct: 227 -----------------------------KRGEPDLALNLLNKMEKGKIEADVVIYNTII 257
Query: 479 KHL 481
L
Sbjct: 258 DGL 260
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 80/194 (41%), Gaps = 1/194 (0%)
Query: 286 KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNG 345
+ V+K + + Y +I +C+R + +LL +M + E + YN ++ LCK
Sbjct: 205 RMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYK 264
Query: 346 QDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
DA +L +M + PD TY I C G++ A + M+++ + P L
Sbjct: 265 HMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFN 324
Query: 406 AFIKGYFIFYRYEDAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMK 464
A I + + +A K Y + K+ + Y+ L K V EM +
Sbjct: 325 ALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQ 384
Query: 465 NGLRPNVSVYRRVL 478
GL N Y ++
Sbjct: 385 RGLVGNTVTYTTLI 398
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 66/162 (40%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P + ++ +L + K + L E+M + TY IFI Y CR + +A
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
+M+K G P + T + + G+ R +A V + + ++ L +
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
+N A ++ M+ G +P++ Y V+ L + +A
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
>gi|357138636|ref|XP_003570896.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Brachypodium distachyon]
Length = 500
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 96/198 (48%), Gaps = 2/198 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I +C+ + LL+EMR + P T+TYN ++ G + A + EEM+
Sbjct: 277 YNTIIHGLCKERQMRQANQLLIEMRVMRVAPNTVTYNMLIHGHVMLGDNKTASRVREEMV 336
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
D +TY I+ CR GK + + ++ KRGL+P +T AA I G++ E
Sbjct: 337 KNGLQLDIVTYNTLILGLCREGKVKESEHLLQELDKRGLEPNASTFAALITGHWKTQNSE 396
Query: 419 DAYKYV-VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
A + + V+ + + + + ++ S KN + A +V+ +++ + P+ ++
Sbjct: 397 RALQLLNVMKKSGFHPNYDT-FKIVVSTFCKNKDFEGAVDVMKDILGRCMAPDKALLHEF 455
Query: 478 LKHLHTSHQEHMAKCLSS 495
L + + H+A+ L S
Sbjct: 456 FDGLSKAKKLHLAEDLRS 473
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 114/266 (42%), Gaps = 22/266 (8%)
Query: 231 KAFGFLPVLIS-----SKALTKKGIWRVVEVLNQVGGSCLVSGV---RALIEMFSVLG-- 280
+A G LP + S S AL K V Q+ C+ ++ F LG
Sbjct: 160 RAHGLLPRVESCNTFISAALRLKRPEIAVAFFRQMRRCCISPDTYTANMMLAAFCALGRV 219
Query: 281 ------LYEMAKYVIKKTERKVSYYNILIKEMCR-RCDFKGPRDLLVEMRQVGCEPITLT 333
L EM ++ + +T V +N LI CR + +L M + GC P +T
Sbjct: 220 ADAAKMLDEMPEWGVYRT---VVSFNTLIAAYCRGHGGLENALELKRRMEKEGCAPDAVT 276
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
YN ++ LCK Q A +LL EM P+ +TY + I +G A +MV
Sbjct: 277 YNTIIHGLCKERQMRQANQLLIEMRVMRVAPNTVTYNMLIHGHVMLGDNKTASRVREEMV 336
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM-LYSLLASLHDKNNNP 452
K GLQ + T+ I G + +++ ++++ DK N ++ L + H K N
Sbjct: 337 KNGLQLDIVTYNTLILGLCREGKVKES-EHLLQELDKRGLEPNASTFAALITGHWKTQNS 395
Query: 453 VMAKNVLSEMMKNGLRPNVSVYRRVL 478
A +L+ M K+G PN ++ V+
Sbjct: 396 ERALQLLNVMKKSGFHPNYDTFKIVV 421
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 88/184 (47%), Gaps = 2/184 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI CR+ + +L EM +G +P + Y ++ K A ++ EEM
Sbjct: 305 YATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMF 364
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R + TY I C++G + A + F++M G++P + T+ I+GY+ E
Sbjct: 365 ARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNME 424
Query: 419 DAYKYVV-LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
AY+ ++ + + +++ M +++ L + A + EM+ GL+PN+ +Y +
Sbjct: 425 KAYELLIEIKKENLTANAYMCGAIVNGLC-HCGDLTRANELFQEMISWGLKPNIVIYTTI 483
Query: 478 LKHL 481
+K L
Sbjct: 484 VKGL 487
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 38/251 (15%)
Query: 263 SCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
S L+ G+ ++ +G++ ++ + K V Y LI +C+ D K +L +M
Sbjct: 621 SVLIHGLSKNGKLQEAMGVF--SELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDM 678
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELL----EEMLGRN-----------CH---- 363
+ G P +TYN ++ LCK G+ A A EL E+ L RN C
Sbjct: 679 CKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANL 738
Query: 364 ----------------PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAF 407
PD+ Y I C+ G + A + F MV+ G+ A + A
Sbjct: 739 TEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFN-AL 797
Query: 408 IKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
I G+F + +AY+ V D + + +++ Y++L H N A+ + EM K +
Sbjct: 798 IDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNV 857
Query: 468 RPNVSVYRRVL 478
PNV Y +L
Sbjct: 858 MPNVLTYTSLL 868
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 1/207 (0%)
Query: 269 VRALIEMFSVLGLYEMAKYVI-KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGC 327
+ ++ + G +++ + + +K + Y LI +C+ D + DL EM +G
Sbjct: 344 INGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGI 403
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
+P TYN ++ K A ELL E+ N +A + C G A
Sbjct: 404 KPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANE 463
Query: 388 FFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHD 447
F +M+ GL+P + + +KG R+E+A K + + D+ S Y+ +
Sbjct: 464 LFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFC 523
Query: 448 KNNNPVMAKNVLSEMMKNGLRPNVSVY 474
K K+ L EM+ GL+PNV Y
Sbjct: 524 KAGKMEEGKSYLVEMIAKGLKPNVYTY 550
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 102/231 (44%), Gaps = 6/231 (2%)
Query: 263 SCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYY-NILIKEMCRRCDFKGPRDLLVE 321
+CL+ G + M YE+ + K+ +Y ++ +C D +L E
Sbjct: 411 NCLIEGYYKVQNMEKA---YELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQE 467
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M G +P + Y ++ L K G+ +A ++L M + PD Y I+ C+ GK
Sbjct: 468 MISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGK 527
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
+ ++ +M+ +GL+P + T+ AFI GY + A + + D + ++++ +
Sbjct: 528 MEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTD 587
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSH--QEHMA 490
L + K+ N A M+ G+ P+V + ++ L + QE M
Sbjct: 588 LIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMG 638
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 2/216 (0%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
VG +C S + L++ V +++ K ++ V Y LI CR + + +L
Sbjct: 196 VGLACCNSLSKDLLKGNRVELFWKVYKGMLGAIVPDVYTYTNLINAYCRVGKVEEGKHVL 255
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
+M + GC P +TY+ V+ LC+ G +A EL M + PD Y I CR
Sbjct: 256 FDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQ 315
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY-VVLSADKYKSSSNML 438
+ + ++M GL+P + A I G+ A++ + A K K ++
Sbjct: 316 KRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTY 375
Query: 439 YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
Y+L+ L K + A+++ SEM G++P++ Y
Sbjct: 376 YALIHGLC-KIGDLEKAEDLFSEMTMMGIKPDIQTY 410
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 95/210 (45%), Gaps = 5/210 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI C+ + + L + M + G T +N ++ K G+ +A +L+E+M+
Sbjct: 760 YCALIDGCCKAGNTEKALSLFLGMVEEGIAS-TPAFNALIDGFFKLGKLIEAYQLVEDMV 818
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+ +TY I I Y C VG A F +M KR + P + T+ + + GY R
Sbjct: 819 DNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRS 878
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ + + ++ +S++ H K N + A ++ +M+ G+ ++Y ++
Sbjct: 879 EMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILI 938
Query: 479 ----KHLHTSHQEHMAKCLSSRYSSLSLGS 504
KH + S + + + S LSL +
Sbjct: 939 DALCKHNNLSEVLKVLDEVEKQGSKLSLAT 968
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 74/183 (40%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I C+ + + LVEM G +P TY + C+ G+ A EML
Sbjct: 515 YNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEML 574
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ + I C+ G AF F M+ +G+ P + TH+ I G + +
Sbjct: 575 DSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQ 634
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A DK Y+ L S K + A + +M K G+ PN+ Y ++
Sbjct: 635 EAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALI 694
Query: 479 KHL 481
L
Sbjct: 695 NGL 697
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M G P T++ ++ L KNG+ +A + E+L + PD TY I C+ G
Sbjct: 608 MLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGD 667
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
AF + M K+G+ P + T+ A I G A + +K + +++ YS
Sbjct: 668 LKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYST 727
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + + K+ N A + M G+ P+ VY
Sbjct: 728 IIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVY 760
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 55/116 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +++LI + + + + E+ G P TY ++ LCK G A EL +
Sbjct: 617 VQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHD 676
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
+M + +P+ +TY I C++G+ A F+ + ++GL T++ I GY
Sbjct: 677 DMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGY 732
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 52/125 (41%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
+ + + K + V Y I CR + + +EM G P + ++ CK
Sbjct: 535 LVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCK 594
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
+G A ML + PD T+ + I + GK A F++++ +GL P + T
Sbjct: 595 DGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFT 654
Query: 404 HAAFI 408
+ + I
Sbjct: 655 YTSLI 659
>gi|255660982|gb|ACU25660.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 350
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 89/184 (48%), Gaps = 2/184 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI + F+ + EM + C P +TYN ++ LCKN +A L++E+L
Sbjct: 141 YNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELL 200
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ +P ITY + + C K + A +NQ+ +G +P + H I G + +
Sbjct: 201 DKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQ 260
Query: 419 DAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
A + +++K + N++ ++ L K+ + A + + +++NGL P++ Y
Sbjct: 261 LALS-LYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNIT 319
Query: 478 LKHL 481
LK L
Sbjct: 320 LKGL 323
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 97/226 (42%)
Query: 282 YEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+E+ + + + R VS +NI+++ + + M++ G ++TY ++
Sbjct: 19 FELWEMMGSEGNRSVSSFNIMMRGLFDNDKVDEVISIWELMKKSGFVEDSITYGILVHGF 78
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
CKNG + +LE + DA Y I C+ D A + N M+K G +P
Sbjct: 79 CKNGYIDKSLHVLEMAEQKGGVVDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNA 138
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
+ I G ++EDA + + S + + Y+ L + KN A N++ E
Sbjct: 139 HVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKE 198
Query: 462 MMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSVE 507
++ GL P V Y ++K L H+ A L ++ +S V+
Sbjct: 199 LLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQ 244
>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 775
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 90/194 (46%), Gaps = 3/194 (1%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L+EM +K V Y+ LI +C+ + L++MR+VG P TY ++
Sbjct: 345 LHEMKNSGLKPN---VVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDA 401
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
CK G +DA +L +EML + +TY + C+ G+ A + F M+K G+ P
Sbjct: 402 NCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPN 461
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
L T+ A + G+ R E+A + + +K +LY + N + V+S
Sbjct: 462 LKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMS 521
Query: 461 EMMKNGLRPNVSVY 474
EM G+R N +Y
Sbjct: 522 EMKACGIRANSVIY 535
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 87/188 (46%)
Query: 294 RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACEL 353
+ V YNI+I MC+ D + L +M+Q+G P +TYN ++ K G ++ L
Sbjct: 250 QSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCL 309
Query: 354 LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
EEM C PD ITY I C+ + AF+F ++M GL+P + T++ I
Sbjct: 310 FEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCK 369
Query: 414 FYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
+ + A K+++ S + Y+ L + K A + EM++ + NV
Sbjct: 370 EHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVT 429
Query: 474 YRRVLKHL 481
Y +L L
Sbjct: 430 YTTLLDGL 437
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 99/252 (39%), Gaps = 11/252 (4%)
Query: 235 FLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSV---LGLYEMAKYVIKK 291
FL LISS+ + + V EVL C V G +FSV LG+ E A +
Sbjct: 151 FLKELISSRRILPG--FDVFEVLWSTRNVC-VPGFGVFDALFSVFIELGMLEEAGQCFSR 207
Query: 292 TER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQ 346
R K N + + + +M G TYN ++G +CK G
Sbjct: 208 MTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGD 267
Query: 347 DADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAA 406
A L +M PD +TY I ++G D +F F +M G +P + T+ A
Sbjct: 268 MVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNA 327
Query: 407 FIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNG 466
I + + + A+ ++ + + + YS L K + A L +M + G
Sbjct: 328 LINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVG 387
Query: 467 LRPNVSVYRRVL 478
L PN Y ++
Sbjct: 388 LSPNEFTYTSLI 399
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 80/194 (41%), Gaps = 1/194 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +I +C + + ++ EM+ G ++ Y + K G+ +A LL+EM
Sbjct: 500 YGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMC 559
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP-RLATHAAFIKGYFIFYRY 417
+T+ + I C+ G + A ++F +M LQP +A A I G
Sbjct: 560 DLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYI 619
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
E A K DK + Y+ L + K+ + A N+ S M + G+ ++ Y +
Sbjct: 620 EAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSL 679
Query: 478 LKHLHTSHQEHMAK 491
+ L + A+
Sbjct: 680 VWGLSQGNLVQQAR 693
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 75/186 (40%), Gaps = 11/186 (5%)
Query: 329 PITLTYNYVLGVLCKNGQDADACE-LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
P L Y ++ LC + + CE ++ EM +++ Y I + + GK A N
Sbjct: 495 PDLLLYGTIIWGLCSQNK-LEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALN 553
Query: 388 FFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHD 447
+M G++ + T I G E+A Y AD +N+ ++ +L D
Sbjct: 554 LLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNV--AVCTALID 611
Query: 448 ---KNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKH--LHTSHQEHMAKCLSSRYSSLSL 502
KNN AK + EM + P+ Y ++ H QE + + SR S L +
Sbjct: 612 GLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALN--IRSRMSELGM 669
Query: 503 GSSVEA 508
+ A
Sbjct: 670 ELDLHA 675
>gi|297743427|emb|CBI36294.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 102/236 (43%), Gaps = 7/236 (2%)
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVL---GLYEMAKYVIKKTERKV----SYYNILIKE 305
+ +Q+G + +GV + ++ VL + A+ K +V Y+IL++
Sbjct: 142 AIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDKVNVEVMPNAKTYSILMRG 201
Query: 306 MCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPD 365
D R L EMR+ GC + YN +L LCK G +A +L EM PD
Sbjct: 202 WGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPD 261
Query: 366 AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV 425
A +Y IFI C V AF ++M + L P + T+ +K + ++AY+ +
Sbjct: 262 ACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLD 321
Query: 426 LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
++ S Y+ + + H + A ++S M K P+ Y VLK L
Sbjct: 322 EMIERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKML 377
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 26/245 (10%)
Query: 180 FLKYMREIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVL 239
F K E+MP N+ S+++ G + D R+L + ++ A+ L
Sbjct: 181 FDKVNVEVMP----NAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSL--- 233
Query: 240 ISSKALTKKG-IWRVVEVLNQVGGSCLVSG-------VRALIEMFSVLGLYEMAKYVIKK 291
+AL K G + ++ ++G + L +RA E+ + ++ V+ +
Sbjct: 234 --LEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQ----VLDR 287
Query: 292 TER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQ 346
R V YN ++K++C+ LL EM + G P +YN + C + +
Sbjct: 288 MRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHCDHCE 347
Query: 347 DADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAA 406
A L+ M NC PD TY + + RVG+FD + + M +RG P +T+A
Sbjct: 348 VNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGGMEERGFYPAASTYAV 407
Query: 407 FIKGY 411
+ G+
Sbjct: 408 MVHGF 412
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 85/217 (39%), Gaps = 39/217 (17%)
Query: 270 RALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEP 329
RA + ++ ++M + +K V + L+ +C+R K ++ ++ V P
Sbjct: 135 RANLPGDAIRAFHQMGDFGVKAG---VGDVDQLLYVLCKRKHVKQAQEFFDKV-NVEVMP 190
Query: 330 ITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFF 389
TY+ ++ G ++A +L EEM R C D + Y + C+ G D A+ F
Sbjct: 191 NAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLF 250
Query: 390 NQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKN 449
+M GL P +++ FI+ Y N ++S
Sbjct: 251 REMGSNGLAPDACSYSIFIRAY---------------------CEVNDIHS--------- 280
Query: 450 NNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
A VL M + L PNV Y ++K L S +
Sbjct: 281 -----AFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEK 312
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 115/277 (41%), Gaps = 7/277 (2%)
Query: 211 YETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVR 270
+ M L N + + + F L + + + + E + Q G S V
Sbjct: 421 FADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTE-MQQQGVSPDVVTYS 479
Query: 271 ALIEMFSVLG-----LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
+I FS +G + + + V + + + Y+ +I+ C ++L+ EM
Sbjct: 480 TVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINK 539
Query: 326 GC-EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
G P + +N V+ LCK+G+ DA ++ + + PD IT+ I C VGK D
Sbjct: 540 GIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDK 599
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLAS 444
AF + M G++ + T++ + GYF R D K + + Y ++ +
Sbjct: 600 AFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLA 659
Query: 445 LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ V A+ EM+++G VS+Y +L L
Sbjct: 660 GLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGL 696
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 78/183 (42%), Gaps = 12/183 (6%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVG--CEPITLTYNYVLGVLCKNGQDADACELLEE 356
Y+I++K +C + DL M + G C P + YN V+ K G+ AC L E
Sbjct: 231 YSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHE 290
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
M + PD +TY + I C+ D A QM G QP T+ I GY R
Sbjct: 291 MTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGR 350
Query: 417 YEDAYKYVVLSADKYKSSS---NMLY--SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
++A K K KS N++ S LASL K+ A + M G +P++
Sbjct: 351 LKEAAKMF----RKMKSRGLIPNIVICNSFLASLC-KHGRSKEAAEIFDSMTAKGHKPDI 405
Query: 472 SVY 474
Y
Sbjct: 406 VSY 408
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 86/198 (43%), Gaps = 3/198 (1%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
+EM + +K V YN++I +C+ +L +M G +P T+TYN ++
Sbjct: 288 FHEMTRQGVKP---DVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHG 344
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
G+ +A ++ +M R P+ + F+ C+ G+ A F+ M +G +P
Sbjct: 345 YATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPD 404
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
+ ++ + GY + D ++ ++++L + K A + +
Sbjct: 405 IVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFT 464
Query: 461 EMMKNGLRPNVSVYRRVL 478
EM + G+ P+V Y V+
Sbjct: 465 EMQQQGVSPDVVTYSTVI 482
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 93/230 (40%), Gaps = 10/230 (4%)
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDF 312
V+ + + G CLV + + F +L E + E + Y+ L+ +
Sbjct: 581 VITFTSLIDGYCLVG---KMDKAFKILDAME-----VVGVETDIVTYSTLLDGYFKNGRI 632
Query: 313 KGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIF 372
L EM++ G +P T+TY +L L + G+ A + EM+ Y I
Sbjct: 633 NDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGII 692
Query: 373 IVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK-YVVLSADKY 431
+ CR D A F ++ ++ + I + R E+A + + +SA
Sbjct: 693 LGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGL 752
Query: 432 KSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + ++ +L K+ A N+ S M K+G+ P + R+++ L
Sbjct: 753 LPNESTYGVMIINLL-KDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRML 801
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 100/240 (41%), Gaps = 10/240 (4%)
Query: 243 KALTKKG-IWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNI 301
K +T +G + VV + + G C + A + +F + +A + Y+
Sbjct: 294 KTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEV--------VYSA 345
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
LI +C+ ++L +M++ C P T+TYN ++ LCK+G A +EML
Sbjct: 346 LIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAG 405
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
C PD TY I + C+ G D A F+ M P + T+ I G + A
Sbjct: 406 CKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKAS 465
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y ++ + +YS L K+ + EM ++G+ N R++ HL
Sbjct: 466 LYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV-ANSQTRTRLIFHL 524
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 85/226 (37%), Gaps = 35/226 (15%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
M K ++ YN L+ +C+ + DLL ++ GC P +TY ++ L K
Sbjct: 188 MEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGK 247
Query: 344 NGQDADACELLEEMLGRN-----------------------------------CHPDAIT 368
+ +A +L +EM R C PD +T
Sbjct: 248 EKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVT 307
Query: 369 YEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSA 428
I C+ G+ A F M RGL P ++A I G + + A + +
Sbjct: 308 LSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMK 367
Query: 429 DKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + + Y++L K+ + A+ EM++ G +P+V Y
Sbjct: 368 KAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTY 413
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 98/244 (40%), Gaps = 23/244 (9%)
Query: 229 NEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYV 288
NE A FLP + + W V+ + G CL R E F+V+ E Y
Sbjct: 84 NELATTFLPDVET---------WNVL-----ITGYCLA---REPEEAFAVIREME-EDYG 125
Query: 289 IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
+ + + +N+++ +C+ D GC TY ++ L KN +
Sbjct: 126 VAPS---LKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQ 182
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
DA L+E++ C P TY + C++G+ + A + ++V G P + T+ + I
Sbjct: 183 DAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLI 242
Query: 409 KGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS-LLASLHDKNNNPVMAKNVLSEMMKNGL 467
G R +AYK A + + Y+ L+ L P A +V M G
Sbjct: 243 DGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIP-QASSVYKTMTSQGC 301
Query: 468 RPNV 471
P+V
Sbjct: 302 VPDV 305
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 74/190 (38%), Gaps = 7/190 (3%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQV----GCEPITLTYNYVLGVLCKNGQDADAC 351
V +N+LI C + P + +R++ G P T+N VL LCK+G+ A
Sbjct: 94 VETWNVLITGYCLA---REPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAM 150
Query: 352 ELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
+ E C D TY + + + K A ++ G P +AT+ A + G
Sbjct: 151 DHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGL 210
Query: 412 FIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
R E+A + D + + Y+ L K A + EM GL +
Sbjct: 211 CKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDT 270
Query: 472 SVYRRVLKHL 481
Y +++ L
Sbjct: 271 VCYTALIRGL 280
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y LI +C+R M++ GC P + Y+ ++ LCK+G+ C L +
Sbjct: 445 VVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFD 504
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
EM R+ ++ T I + C+ + D A + FN + K G+
Sbjct: 505 EM-ERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM 545
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 109/268 (40%), Gaps = 28/268 (10%)
Query: 242 SKALTKKGIWRVVEVLNQ-VGGSCLVSGVRALIEMFSVLG-------------LYE---- 283
++ LT KG+ V N + G CL S +E+F + L E
Sbjct: 395 ARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCS 454
Query: 284 -----MAKYVIKKTE-----RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLT 333
A ++K+ E R V YN LI +C+ D+ +M +G ++T
Sbjct: 455 ERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVT 514
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
YN ++ LCK+ + +A +L+++M+ PD TY + Y C+ G A + M
Sbjct: 515 YNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMT 574
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPV 453
G +P + T+ I G R + A K + K + Y+ + K
Sbjct: 575 LNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTK 634
Query: 454 MAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A + EMM+ G P+V Y+ V + L
Sbjct: 635 EAMRLFREMMEKGDPPDVITYKIVFRGL 662
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 113/269 (42%), Gaps = 6/269 (2%)
Query: 217 LLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMF 276
+L D Y + +EK F L +A +G R+ E++ + G V L+
Sbjct: 221 MLEDMPNYGLRPDEKTFTTLMQGFIEEA-DVEGALRIKELMVESGCELTSVSVNVLVNGL 279
Query: 277 SVLGLYEMAKYVIKKTE----RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITL 332
G E A I + E +V++ N L+ +CR K +++ M + G E
Sbjct: 280 CKEGRIEEALRFIYEEEGFCPDQVTF-NALVNGLCRTGHIKQGLEMMDFMLEKGFELDVY 338
Query: 333 TYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
TYN ++ LCK G+ +A E+L M+ R+C P+ +TY I C+ + A +
Sbjct: 339 TYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVL 398
Query: 393 VKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNP 452
+G+ P + T + I+G + E A + +K YS+L
Sbjct: 399 TSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRL 458
Query: 453 VMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A +L EM +G NV VY ++ L
Sbjct: 459 KEALMLLKEMELSGCARNVVVYNTLIDGL 487
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 95/222 (42%), Gaps = 8/222 (3%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+G C + V A E+ VL +K V+ V +N LI+ +C + + +L
Sbjct: 379 IGTLCKENHVEAATELARVL----TSKGVLPD----VCTFNSLIQGLCLTSNREIAMELF 430
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
EM++ GC+P TY+ ++ LC + +A LL+EM C + + Y I C+
Sbjct: 431 EEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKN 490
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
+ A + F+QM G+ T+ I G R E+A + + + Y
Sbjct: 491 NRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTY 550
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + + + A +++ M NG P++ Y ++ L
Sbjct: 551 TTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGL 592
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 57/148 (38%), Gaps = 36/148 (24%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY------------------------ 334
Y ++K C++ D K D++ M GCEP +TY
Sbjct: 550 YTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQ 609
Query: 335 -----------NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCR-VGKF 382
N V+ LCK + +A L EM+ + PD ITY+I C G
Sbjct: 610 MKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPI 669
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKG 410
A +F +M+++G+ P + +G
Sbjct: 670 QEAVDFTVEMLEKGILPEFPSFGFLAEG 697
>gi|224160730|ref|XP_002338246.1| predicted protein [Populus trichocarpa]
gi|222871516|gb|EEF08647.1| predicted protein [Populus trichocarpa]
Length = 235
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 77/163 (47%), Gaps = 21/163 (12%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M + GC P+ +YN ++ C++ +A LL EM + PD +TY + C+VG+
Sbjct: 1 MVRKGCGPVVHSYNILINGYCQSRMMDEAKSLLAEMSEKELTPDTVTYSTLMQGLCQVGR 60
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
A N F +M GL P L T++ + G++ ++A K L
Sbjct: 61 PQEALNLFKEMCSTGLLPNLVTYSILLDGFWKHGHLDEALK------------------L 102
Query: 442 LASLHDKNNNPVM---AKNVLSEMMKNGLRPNVSVYRRVLKHL 481
L S+ +K P + AK + S++ +G+RP V Y ++K L
Sbjct: 103 LQSMQEKKLEPDILEVAKELFSKLFVDGIRPTVHTYSVMIKGL 145
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 28/207 (13%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YNILI C+ + LL EM + P T+TY+ ++ LC+ G+ +A L +
Sbjct: 10 VHSYNILINGYCQSRMMDEAKSLLAEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFK 69
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFD--------------------VAFNFFNQMVKR 395
EM P+ +TY I + + G D VA F+++
Sbjct: 70 EMCSTGLLPNLVTYSILLDGFWKHGHLDEALKLLQSMQEKKLEPDILEVAKELFSKLFVD 129
Query: 396 GLQPRLATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSS---NMLYSLLASLHDKNNN 451
G++P + T++ IKG ++AY+ + + D + S N++ + D +
Sbjct: 130 GIRPTVHTYSVMIKGLLKERLSDEAYRLFRKMEDDGFMPDSCSYNVIIQGFLQIRDSST- 188
Query: 452 PVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A ++ EM+ G + + ++ +L
Sbjct: 189 ---AVRLIDEMVGKGFSADSTTFQMLL 212
>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
Length = 584
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 95/220 (43%), Gaps = 16/220 (7%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
+ Y+ L+ D G + EM+ GC+P + Y ++ VLCK A L+++
Sbjct: 310 TTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDK 369
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
ML NC P+ +T+ I C G+ A N F+ M + G P T+ + G F
Sbjct: 370 MLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGN 429
Query: 417 YEDAYKYVV--------LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLR 468
++DA+ V+ LS Y + N L + H A +L MM G++
Sbjct: 430 HKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKH--------AMLLLGRMMVQGIQ 481
Query: 469 PNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSVEA 508
P+ + ++ + +A CL + ++++ +V A
Sbjct: 482 PDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVA 521
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 86/195 (44%), Gaps = 5/195 (2%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN L+ + R + MR+ G +P TYN ++ LC+N + A ++L+
Sbjct: 69 VRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLD 128
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM + CHPD +++ + C++G+ + A F + V P A++ A + +
Sbjct: 129 EMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETV-----PVQASYNAVVHALCGEF 183
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R + + V + + + Y+ + K MA +L+ M+ G PNV +
Sbjct: 184 RMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFT 243
Query: 476 RVLKHLHTSHQEHMA 490
++K + H A
Sbjct: 244 ALVKGFFEDGKVHDA 258
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 93/250 (37%), Gaps = 38/250 (15%)
Query: 263 SCLVSGVRALIEMFSVLGLYEMAKYVI--------KKTERKVSYYNILIKEMCRRCDFKG 314
C GVR + L M V+ + V YN+LI+ +C+
Sbjct: 63 GCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDA 122
Query: 315 PRDLLVEMRQVGCEP------------------------------ITLTYNYVLGVLCKN 344
R +L EM + GC P + +YN V+ LC
Sbjct: 123 ARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGE 182
Query: 345 GQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
+ + ++ EM+ R P+ +TY + C+ + +A +MV G P + T
Sbjct: 183 FRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTF 242
Query: 405 AAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMK 464
A +KG+F + DA D+ + S + Y++L + A + + M +
Sbjct: 243 TALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKR 302
Query: 465 NGLRPNVSVY 474
N L PN + Y
Sbjct: 303 NALLPNATTY 312
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 5/140 (3%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPIT 331
+ E+FSV+ + V + + V Y ++ C+ + + +L M +GC P
Sbjct: 185 MWEVFSVVN-----EMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNV 239
Query: 332 LTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQ 391
LT+ ++ ++G+ DA + M+ P I+Y + I C +G A +FFN
Sbjct: 240 LTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNS 299
Query: 392 MVKRGLQPRLATHAAFIKGY 411
M + L P T++ + G+
Sbjct: 300 MKRNALLPNATTYSTLVDGF 319
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 77/179 (43%), Gaps = 6/179 (3%)
Query: 324 QVGC-EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
+GC +P YN++L L + + + M P+ TY + I C+ +
Sbjct: 61 DLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRV 120
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
D A ++M ++G P +H + G R E+A ++ + S + ++++L
Sbjct: 121 DAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALC 180
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLS 501
+V++EM++ GL+PNV Y ++ + + MA + +R S+
Sbjct: 181 GEFRMWE-----VFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMG 234
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E + YN +I +C+ C K LL M G +P T+N ++ CK G+ + A
Sbjct: 446 ELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAAC 505
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
LL +M NC + + Y I I C GK A + +M+ G+ P AT ++ F
Sbjct: 506 LLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIF 565
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 91/192 (47%), Gaps = 5/192 (2%)
Query: 289 IKKTERKVSYYNILIKEMC--RRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQ 346
+K R Y LI +C RR D DL V+M+ C P TY ++ LC + +
Sbjct: 281 LKGCRRNEVAYTHLIHGLCVARRID--EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSER 338
Query: 347 DADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAA 406
++A L++EM P+ TY + I C KF+ A QM+++GL P + T+ A
Sbjct: 339 KSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNA 398
Query: 407 FIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNG 466
I GY EDA V L + S + Y+ L + K+N A VL++M++
Sbjct: 399 LINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVH-KAMGVLNKMLERK 457
Query: 467 LRPNVSVYRRVL 478
+ P+V Y ++
Sbjct: 458 VLPDVVTYNSLI 469
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 101/258 (39%), Gaps = 37/258 (14%)
Query: 283 EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLC 342
EM + IK + Y +LI +C +C F+ R+LL +M + G P +TYN ++ C
Sbjct: 348 EMEETGIKPN---IHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYC 404
Query: 343 KNGQDADACELLE----------------------------------EMLGRNCHPDAIT 368
K G DA +++E +ML R PD +T
Sbjct: 405 KRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVT 464
Query: 369 YEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSA 428
Y I CR G FD A+ + M RGL P T+ + I R E+A
Sbjct: 465 YNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLE 524
Query: 429 DKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEH 488
K + + ++Y+ L + K A +L +M+ PN + ++ L +
Sbjct: 525 QKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLK 584
Query: 489 MAKCLSSRYSSLSLGSSV 506
A L + + L +V
Sbjct: 585 EATLLEEKMVKIGLQPTV 602
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 90/182 (49%), Gaps = 2/182 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +I +C+ + DL + Q G P + Y ++ CK G+ +A +LE+ML
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 559
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+NC P+++T+ I C GK A +MVK GLQP ++T I ++
Sbjct: 560 SKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFD 619
Query: 419 DAY-KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
AY ++ + + K ++ Y+ + + + A++++++M +NG+ P++ Y +
Sbjct: 620 HAYSRFQQMLSSGTKPDAHT-YTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSL 678
Query: 478 LK 479
+K
Sbjct: 679 IK 680
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 79/186 (42%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y LI C+ +L +M C P +LT+N ++ LC +G+ +A L E
Sbjct: 532 VVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEE 591
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M+ P T I I + G FD A++ F QM+ G +P T+ FI+ Y
Sbjct: 592 KMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREG 651
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R DA + + S YS L + A +VL M G P+ +
Sbjct: 652 RLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFL 711
Query: 476 RVLKHL 481
++KHL
Sbjct: 712 SLIKHL 717
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 80/186 (43%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ YN L+ + R + + +EM + P TYN ++ CK G +A + +
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+++ PD TY I+ C+ D AF FN+M +G + + I G +
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R ++A V D + Y++L + A N++ EM + G++PN+ Y
Sbjct: 303 RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 476 RVLKHL 481
++ L
Sbjct: 363 VLIDSL 368
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 19/127 (14%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLC------KNGQDADAC------------ELLEEML 358
D+L MR GCEP T+ ++ L + G + + C ELLE+M+
Sbjct: 693 DVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMV 752
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK-RGLQPRLATHAAFIKGYFIFYRY 417
+ P+A +YE I+ C VG VA F+ M + G+ P A + ++
Sbjct: 753 EHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKH 812
Query: 418 EDAYKYV 424
+A K V
Sbjct: 813 NEAAKVV 819
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 65/124 (52%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNIL+ +C+ RDL+ EM + GCEP +TY ++ LCK G +A +L EM
Sbjct: 393 YNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMS 452
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R +++ Y I CR K VA N ++M +G +P L T+ + I G R +
Sbjct: 453 ARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRID 512
Query: 419 DAYK 422
+A++
Sbjct: 513 EAFR 516
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 58/122 (47%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI + RR F+ L+ +M GC +TYN ++ CK G EL E+M+
Sbjct: 533 YNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMI 592
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
D I+ I I C+VGK D AF F + RG P + T+ + + G R +
Sbjct: 593 MDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIK 652
Query: 419 DA 420
+A
Sbjct: 653 EA 654
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 101/230 (43%), Gaps = 19/230 (8%)
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDF 312
V+E+L V G+C +M S K V + I++K +C +
Sbjct: 189 VLEIL--VTGNCPQVATNVFYDMLS------------KGVSPTVFTFGIVMKALCMFNEV 234
Query: 313 KGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIF 372
LL +M + GC P ++ Y ++ L + Q ++A +LLEEM C PD T+
Sbjct: 235 DSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDV 294
Query: 373 IVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYK 432
I C+V K A ++M+ RG P T+ + G + +A K ++ K
Sbjct: 295 IHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILI----KIP 350
Query: 433 SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKN-GLRPNVSVYRRVLKHL 481
+N + + L + + + A++ L+E M N G +P++ Y ++ L
Sbjct: 351 CPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGL 400
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 57/110 (51%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LIK C+ + + +L +M G T++ N ++ LCK G+ +A E L + +
Sbjct: 568 YNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAI 627
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
R PD +TY + C+VG+ A N F+++ G++P T+ FI
Sbjct: 628 NRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFI 677
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 91/213 (42%), Gaps = 17/213 (7%)
Query: 280 GLYEMAKYVIKK-TERKVSY----YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
GL E A V+ + + R ++ YN LI +CR+ +LL EM GC+P TY
Sbjct: 439 GLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTY 498
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N ++ LCK + +A L ML + +TY I R G F A N M+
Sbjct: 499 NSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLF 558
Query: 395 RGLQPRLATHAAFIKGYFIFYRYE---DAYKYVV---LSADKYKSSSNMLYSLLASLHDK 448
RG T+ IK + E + Y+ ++ L AD S N++ + L +
Sbjct: 559 RGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTI--SCNIMINGLCKVGKV 616
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+N A L + + G P++ Y VL L
Sbjct: 617 DN----AFEFLRDAINRGFVPDIVTYNSVLNGL 645
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 5/184 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE-M 357
Y L+ +CR R +L+ ++ C P N ++ +GQ +A L E M
Sbjct: 326 YGFLLHGLCRIGKLNEARKILI---KIPC-PNNAILNTLINGYVMSGQLKEAQSFLNETM 381
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
+ PD TY I + C+ G A + N+M +RG +P + T+A + G
Sbjct: 382 INFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLL 441
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
E+A + + + + ++++Y+ L + +A N+LSEM G +P++ Y +
Sbjct: 442 EEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSL 501
Query: 478 LKHL 481
+ L
Sbjct: 502 IYGL 505
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 93/254 (36%), Gaps = 45/254 (17%)
Query: 253 VVEVLNQVGGS---CLVSGVR-ALIEMFSVLGLYEMA-KYVIKKTERKV----SYYNILI 303
++E+ +VGG C V I +G +++ K +++ E + S + I++
Sbjct: 95 LLEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIM 154
Query: 304 KEMCRRCDFKGPRDLLVEMRQVG-CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNC 362
K + LL++MR V CEP +Y+ VL +L A + +ML +
Sbjct: 155 KHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGV 214
Query: 363 HPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
P T+ I + C + D A + M K G P
Sbjct: 215 SPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVP----------------------- 251
Query: 423 YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLH 482
++++Y L + N A +L EM G P+V + V+ L
Sbjct: 252 ------------NSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLC 299
Query: 483 TSHQEHMAKCLSSR 496
++ H A L R
Sbjct: 300 KVNKIHDATKLVDR 313
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 65/124 (52%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNIL+ +C+ RDL+ EM + GCEP +TY ++ LCK G +A +L EM
Sbjct: 393 YNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMS 452
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R +++ Y I CR K VA N ++M +G +P L T+ + I G R +
Sbjct: 453 ARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRID 512
Query: 419 DAYK 422
+A++
Sbjct: 513 EAFR 516
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 58/122 (47%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI + RR F+ L+ +M GC +TYN ++ CK G EL E+M+
Sbjct: 533 YNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMI 592
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
D I+ I I C+VGK D AF F + RG P + T+ + + G R +
Sbjct: 593 MDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIK 652
Query: 419 DA 420
+A
Sbjct: 653 EA 654
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 101/230 (43%), Gaps = 19/230 (8%)
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDF 312
V+E+L V G+C +M S K V + I++K +C +
Sbjct: 189 VLEIL--VTGNCPQVATNVFYDMLS------------KGVSPTVFTFGIVMKALCMFNEV 234
Query: 313 KGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIF 372
LL +M + GC P ++ Y ++ L + Q ++A +LLEEM C PD T+
Sbjct: 235 DSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDV 294
Query: 373 IVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYK 432
I C+V K A ++M+ RG P T+ + G + +A K ++ K
Sbjct: 295 IHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILI----KIP 350
Query: 433 SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKN-GLRPNVSVYRRVLKHL 481
+N + + L + + + A++ L+E M N G +P++ Y ++ L
Sbjct: 351 CPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGL 400
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 57/110 (51%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LIK C+ + + +L +M G T++ N ++ LCK G+ +A E L + +
Sbjct: 568 YNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAI 627
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
R PD +TY + C+VG+ A N F+++ G++P T+ FI
Sbjct: 628 NRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFI 677
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 91/213 (42%), Gaps = 17/213 (7%)
Query: 280 GLYEMAKYVIKK-TERKVSY----YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
GL E A V+ + + R ++ YN LI +CR+ +LL EM GC+P TY
Sbjct: 439 GLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTY 498
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N ++ LCK + +A L ML + +TY I R G F A N M+
Sbjct: 499 NSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLF 558
Query: 395 RGLQPRLATHAAFIKGYFIFYRYE---DAYKYVV---LSADKYKSSSNMLYSLLASLHDK 448
RG T+ IK + E + Y+ ++ L AD S N++ + L +
Sbjct: 559 RGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTI--SCNIMINGLCKVGKV 616
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+N A L + + G P++ Y VL L
Sbjct: 617 DN----AFEFLRDAINRGFVPDIVTYNSVLNGL 645
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 5/184 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE-M 357
Y L+ +CR R +L+ ++ C P N ++ +GQ +A L E M
Sbjct: 326 YGFLLHGLCRIGKLNEARKILI---KIPC-PNNAILNTLINGYVMSGQLKEAQSFLNETM 381
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
+ PD TY I + C+ G A + N+M +RG +P + T+A + G
Sbjct: 382 INFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLL 441
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
E+A + + + + ++++Y+ L + +A N+LSEM G +P++ Y +
Sbjct: 442 EEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSL 501
Query: 478 LKHL 481
+ L
Sbjct: 502 IYGL 505
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 93/254 (36%), Gaps = 45/254 (17%)
Query: 253 VVEVLNQVGGS---CLVSGVR-ALIEMFSVLGLYEMA-KYVIKKTERKV----SYYNILI 303
++E+ +VGG C V I +G +++ K +++ E + S + I++
Sbjct: 95 LLEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIM 154
Query: 304 KEMCRRCDFKGPRDLLVEMRQVG-CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNC 362
K + LL++MR V CEP +Y+ VL +L A + +ML +
Sbjct: 155 KHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGV 214
Query: 363 HPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
P T+ I + C + D A + M K G P
Sbjct: 215 SPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVP----------------------- 251
Query: 423 YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLH 482
++++Y L + N A +L EM G P+V + V+ L
Sbjct: 252 ------------NSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLC 299
Query: 483 TSHQEHMAKCLSSR 496
++ H A L R
Sbjct: 300 KVNKIHDATKLVDR 313
>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Brachypodium distachyon]
Length = 714
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 84/187 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+LI +C+ K L ++M G +TY ++ C+ G+ +A + + M+
Sbjct: 513 YNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMV 572
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P +TY IFI CR G +A+ +F +M++ G++P T+ + R E
Sbjct: 573 ASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTE 632
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
AY++ ++ + Y+LL K N V A + EM + G+ P+ + +
Sbjct: 633 SAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALF 692
Query: 479 KHLHTSH 485
K H
Sbjct: 693 KGFGEGH 699
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 1/129 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y I I CRR + +M + G EP +TYN ++ LC+ G+ A +
Sbjct: 580 VVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFH 639
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EML R P+ TY + I SC+ G + A + +M ++G+ P TH A KG+ +
Sbjct: 640 EMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKGFGEGH 699
Query: 416 RYEDAYKYV 424
Y DA +Y+
Sbjct: 700 MY-DAVQYL 707
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 165/400 (41%), Gaps = 21/400 (5%)
Query: 99 NGSCRSQISKLGLLTSRCISSFAMVNGPYATP--KQVSEIIELLRSGDSETE-----SKL 151
+ C++Q S +++C+S+F + P K+ + ++ +LR + S +
Sbjct: 161 SAECQAQKSVPASCSTQCLSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDM 220
Query: 152 LSMSVSLSNASVIEILRVL--NSEKVSALCFLKYMREIMPEFYKNSDICSLVIDNCGRLD 209
L + V S + +L A+ LK M N ++VI+ R
Sbjct: 221 LQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKG 280
Query: 210 DYETMRQLLNDFNVYQVCLNEKAFGFLPVLIS--SKALTKKGIWRVVEVLNQVGGSCLVS 267
+ E QL++ + ++ AF + P++ ++ +K ++E+ N+ G V
Sbjct: 281 ELEKAAQLVD---IMRLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENE-GIVPTVV 336
Query: 268 GVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEM 322
LI+ G E A+ + K + YN LI C+ + K L ++
Sbjct: 337 TYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDL 396
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
++ G P LTYN ++ C+ G A L EEM +C PD TY I + SC V
Sbjct: 397 KRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNL 456
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
+ FF++M+ +GL+P + I +A++ + SS + Y++L
Sbjct: 457 AMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVL 516
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLH 482
K + A + +M+ +GLR + Y L H H
Sbjct: 517 IDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTY-TCLIHAH 555
>gi|255660984|gb|ACU25661.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 376
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 89/184 (48%), Gaps = 2/184 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI + F+ + EM + C P +TYN ++ LCKN +A L++E+L
Sbjct: 167 YNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELL 226
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ +P ITY + + C K + A +NQ+ +G +P + H I G + +
Sbjct: 227 DKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQ 286
Query: 419 DAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
A + +++K + N++ ++ L K+ + A + + +++NGL P++ Y
Sbjct: 287 LALS-LYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNIT 345
Query: 478 LKHL 481
LK L
Sbjct: 346 LKGL 349
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 97/226 (42%)
Query: 282 YEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+E+ + + + R VS +NI+++ + + M++ G ++TY ++
Sbjct: 45 FELWEMMGSEGNRSVSSFNIMMRGLFDNDKVDEVISIWELMKKSGFVEDSITYGILVHGF 104
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
CKNG + +LE + DA Y I C+ D A + N M+K G +P
Sbjct: 105 CKNGYIDKSLHVLEMAEQKGGVVDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNA 164
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
+ I G ++EDA + + S + + Y+ L + KN A N++ E
Sbjct: 165 HVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKE 224
Query: 462 MMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSVE 507
++ GL P V Y ++K L H+ A L ++ +S V+
Sbjct: 225 LLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQ 270
>gi|410109885|gb|AFV61022.1| pentatricopeptide repeat-containing protein 11, partial
[Coelocarpum swinglei]
Length = 429
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 86/183 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ +L EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 210 VYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYK 269
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G A + ++M +GL+P ++ I G
Sbjct: 270 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKISYTTLIDGCCKEG 329
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A+++ + ++ Y+ L S + + A+ +L EM+ GLRP+ Y
Sbjct: 330 DLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAEKMLREMLSVGLRPDTGTYT 389
Query: 476 RVL 478
++
Sbjct: 390 MII 392
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 8/147 (5%)
Query: 264 CLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMR 323
C +R + +F + + + V+ +N L+ R D L M
Sbjct: 151 CKEGDIRVALSVFDAITKWGLRPSVVS--------FNTLMNGYIRLGDLDEGFRLKSAMH 202
Query: 324 QVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
G +P TY+ ++ LCK + DA EL +EML + P+ +T+ I C+ G+ D
Sbjct: 203 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 262
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKG 410
+A + QM+ + L P L T+ I G
Sbjct: 263 LAMEVYKQMLSQSLSPDLITYNTLIYG 289
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C++ D K +DL+ EMR G +P ++Y ++ CK G A E + M+
Sbjct: 283 YNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMI 342
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
N D + Y I C+ G+ A +M+ GL+P T+ I +
Sbjct: 343 QENIRLDDVAYTALISGLCQEGRSIDAEKMLREMLSVGLRPDTGTYTMIINEF 395
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 74/173 (42%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ C+ D + + + + G P +++N ++ + G + L M
Sbjct: 142 FFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAM 201
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
PD TY + I C+ K D A F++M+ +GL P T I G+ R
Sbjct: 202 HASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRV 261
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
+ A + + S + Y+ L K + A++++ EM GL+P+
Sbjct: 262 DLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPD 314
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 61/145 (42%)
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
+N ++ CK G A + + + P +++ + R+G D F + M
Sbjct: 143 FNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMH 202
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPV 453
G+QP + T++ I G + +DA + DK + + ++ L H KN
Sbjct: 203 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 262
Query: 454 MAKNVLSEMMKNGLRPNVSVYRRVL 478
+A V +M+ L P++ Y ++
Sbjct: 263 LAMEVYKQMLSQSLSPDLITYNTLI 287
>gi|162462150|ref|NP_001105879.1| chloroplast RNA processing1 [Zea mays]
gi|3289002|gb|AAC25599.1| CRP1 [Zea mays]
Length = 668
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 127/297 (42%), Gaps = 24/297 (8%)
Query: 199 SLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIW-RVVEVL 257
SL++D R +E+ R LL + V ++ F +L + +G W + VL
Sbjct: 338 SLLVDAYTRAGRWESARILLKEMEADGV--KPSSYVFSRILAGFR---DRGDWQKAFAVL 392
Query: 258 NQVGGSCLVSGVRALIEMFSVL----GLYEMAKYVI--------KKTERKVSYYNILIKE 305
++ S GVR ++V+ G Y + + + E V +N LI
Sbjct: 393 REMQAS----GVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDA 448
Query: 306 MCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPD 365
C+ +L EMR+ C P T TYN ++ +L + +L EM + P+
Sbjct: 449 HCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPN 508
Query: 366 AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV- 424
ITY + R G++ A + M GL+P + A + Y + A V
Sbjct: 509 IITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVK 568
Query: 425 VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ AD + S +L SL+ + ++ V A +VL M +NGLRP+V Y ++K L
Sbjct: 569 AMKADGLEVSILVLNSLINAF-GEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKAL 624
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/340 (20%), Positives = 125/340 (36%), Gaps = 45/340 (13%)
Query: 178 LCFLKYMRE--IMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGF 235
L L +RE +P+ S + + ++ N D + +LL D ++ + F
Sbjct: 175 LRLLSLLREHDFLPDLASYSHLLASLL-NTRDPPDAALLERLLGDLRESRLEPDAPLFSD 233
Query: 236 LPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAK------YVI 289
L + AL + ++ +G + + V ALI G A+ ++
Sbjct: 234 LISAFARAALPDAAL-ELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLA 292
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQ--- 346
+ + + YN L+K R K +L EM Q G P TY+ ++ + G+
Sbjct: 293 GEIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWES 352
Query: 347 --------DAD------------------------ACELLEEMLGRNCHPDAITYEIFIV 374
+AD A +L EM PD Y + I
Sbjct: 353 ARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMID 412
Query: 375 YSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSS 434
+ A + FN+M + G++P + T I + R++ A + +
Sbjct: 413 TFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPP 472
Query: 435 SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
Y+++ +L + + + +LSEM + GL PN+ Y
Sbjct: 473 GTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITY 512
>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 585
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 82/179 (45%), Gaps = 3/179 (1%)
Query: 245 LTKKGIW-RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILI 303
+ K G W VV + G C + +++ + L + Y I + + YNI+I
Sbjct: 187 MQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEM-LNGTSPYAIN-CKPNIFSYNIII 244
Query: 304 KEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH 363
E+C+ +K + L EM G P +T++ ++ LCK G +A + LE M+ R
Sbjct: 245 DELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIV 304
Query: 364 PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
PD T+ I C VG D A F M +G +P + ++ I GY + E+A K
Sbjct: 305 PDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMK 363
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Query: 280 GLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
GL MA + + V Y LIK +C L + M+++GC P +TY ++
Sbjct: 145 GLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIK 204
Query: 340 VLCKNGQDADACELLEEML------GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
LC+ G A +L +EML NC P+ +Y I I C++GK+ A FN+MV
Sbjct: 205 GLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMV 264
Query: 394 KRGLQPRLATHAAFI 408
+G++P + T +A I
Sbjct: 265 DQGVRPDVVTFSALI 279
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 6/204 (2%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQ------VGCEPITLTYNYVLGVLCKNGQDAD 349
V Y LIK +CR + L EM + C+P +YN ++ LCK G+ +
Sbjct: 196 VVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKE 255
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A L EM+ + PD +T+ I C+ G A F M+ RG+ P L T + I+
Sbjct: 256 AKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIE 315
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
G+ + + A + + K + Y++L + K N A + +EM++ G P
Sbjct: 316 GFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWP 375
Query: 470 NVSVYRRVLKHLHTSHQEHMAKCL 493
++ + +LK L + + AK L
Sbjct: 376 DMKTFCVLLKGLFLAGKVGDAKKL 399
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 72/150 (48%), Gaps = 2/150 (1%)
Query: 301 ILIKEMCRR-CDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
+ + +C+ C F+ +L E++ + ++N ++ LCK + A EL E++
Sbjct: 417 VFLDGLCKNGCLFEA-MELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQ 475
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
PD +TY I I C+ G+ D A F M + G P L T++A + G++ + E+
Sbjct: 476 EGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEE 535
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKN 449
K + K S + +Y+++ + K+
Sbjct: 536 VVKLLHKMIQKDVSLAASIYTIVEDMVSKD 565
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 103/279 (36%), Gaps = 79/279 (28%)
Query: 271 ALIEMFSVLGLYEMAKYVI-----KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
+LIE F ++G + AK + K E V Y +LI C+ + + L EM +V
Sbjct: 312 SLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRV 371
Query: 326 GCEPITLTYNYVL----------------GV-------------------LCKNGQDADA 350
G P T+ +L GV LCKNG +A
Sbjct: 372 GKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEA 431
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
EL E+ N D ++ I C+ K + A+ F ++ + GLQP + T+ I G
Sbjct: 432 MELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMING 491
Query: 411 YFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMK-NGLRP 469
+ N V N+L +MM+ NG P
Sbjct: 492 FC------------------------------------KNGQVDNANILFQMMEENGCTP 515
Query: 470 NVSVYRRVLKHLHTSHQ-EHMAKCLSSRYS-SLSLGSSV 506
N+ Y +L + +++ E + K L +SL +S+
Sbjct: 516 NLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASI 554
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 79/197 (40%), Gaps = 12/197 (6%)
Query: 294 RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACEL 353
R + +N+L+ + + + L +M G P T N ++ LC + +
Sbjct: 89 RSIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSA 148
Query: 354 LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
+ ++ R PD +TY I C + A F +M K G P + T+ IKG
Sbjct: 149 MAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKG--- 205
Query: 414 FYRYEDAYKYVVLSADKYKSSS--------NML-YSLLASLHDKNNNPVMAKNVLSEMMK 464
R + + L + +S N+ Y+++ K AK + +EM+
Sbjct: 206 LCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVD 265
Query: 465 NGLRPNVSVYRRVLKHL 481
G+RP+V + ++ L
Sbjct: 266 QGVRPDVVTFSALIDTL 282
>gi|356544600|ref|XP_003540737.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Glycine max]
Length = 449
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 87/188 (46%)
Query: 294 RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACEL 353
R + +N L+ + F D+ + ++G P T+T+N ++ G+ ACE+
Sbjct: 138 RTIQSFNALLNVLIDNDRFDEANDIFGKSYEMGFRPNTVTFNIMVKGRLAKGEWGKACEV 197
Query: 354 LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
+EML + P +TY I + CR G D A M ++G T+A ++G
Sbjct: 198 FDEMLQKRVQPSVVTYNSLIGFLCRKGDLDKAMALLEDMGQKGKHANEVTYALLMEGLCS 257
Query: 414 FYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
+ E+A K + A + + + + +L + K AK++L EM K L+P+V
Sbjct: 258 VEKTEEAKKLMFDMAYRGCKAQPVNFGVLMNDLGKRGKVEEAKSLLHEMKKRRLKPDVVT 317
Query: 474 YRRVLKHL 481
Y ++ +L
Sbjct: 318 YNILINYL 325
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 61/112 (54%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ +L+ ++ +R + + LL EM++ +P +TYN ++ LCK G+ +A ++L EM
Sbjct: 283 FGVLMNDLGKRGKVEEAKSLLHEMKKRRLKPDVVTYNILINYLCKEGKAMEAYKVLLEMQ 342
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
C P+A TY + + C++G F+VA + N M+ PR T + G
Sbjct: 343 IGGCVPNAATYRMVVDGLCQIGDFEVALSVLNAMLTSRHCPRSETFNCMVVG 394
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 13/190 (6%)
Query: 234 GFLPVLISSKALTK----KGIW-RVVEVLNQVGGSCLVSGV---RALIEMFSVLGLYEMA 285
GF P ++ + K KG W + EV +++ + V +LI G + A
Sbjct: 170 GFRPNTVTFNIMVKGRLAKGEWGKACEVFDEMLQKRVQPSVVTYNSLIGFLCRKGDLDKA 229
Query: 286 KYVIKKTERKVSY-----YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
+++ +K + Y +L++ +C + + L+ +M GC+ + + ++
Sbjct: 230 MALLEDMGQKGKHANEVTYALLMEGLCSVEKTEEAKKLMFDMAYRGCKAQPVNFGVLMND 289
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
L K G+ +A LL EM R PD +TY I I Y C+ GK A+ +M G P
Sbjct: 290 LGKRGKVEEAKSLLHEMKKRRLKPDVVTYNILINYLCKEGKAMEAYKVLLEMQIGGCVPN 349
Query: 401 LATHAAFIKG 410
AT+ + G
Sbjct: 350 AATYRMVVDG 359
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 77/192 (40%), Gaps = 35/192 (18%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K+ + V YN LI +CR+ D LL +M Q G +TY ++ LC + +
Sbjct: 204 KRVQPSVVTYNSLIGFLCRKGDLDKAMALLEDMGQKGKHANEVTYALLMEGLCSVEKTEE 263
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A +L+ +M R C + + + + + GK + A + ++M KR L+P + T
Sbjct: 264 AKKLMFDMAYRGCKAQPVNFGVLMNDLGKRGKVEEAKSLLHEMKKRRLKPDVVT------ 317
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
Y++L + K + A VL EM G P
Sbjct: 318 -----------------------------YNILINYLCKEGKAMEAYKVLLEMQIGGCVP 348
Query: 470 NVSVYRRVLKHL 481
N + YR V+ L
Sbjct: 349 NAATYRMVVDGL 360
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 66/143 (46%), Gaps = 6/143 (4%)
Query: 268 GVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGC 327
G R +E L L+EM K +K V YNILI +C+ +L+EM+ GC
Sbjct: 291 GKRGKVEEAKSL-LHEMKKRRLKPD---VVTYNILINYLCKEGKAMEAYKVLLEMQIGGC 346
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEML-GRNCHPDAITYEIFIVYSCRVGKFDVAF 386
P TY V+ LC+ G A +L ML R+C P + T+ +V + G D +
Sbjct: 347 VPNAATYRMVVDGLCQIGDFEVALSVLNAMLTSRHC-PRSETFNCMVVGLLKSGNIDGSC 405
Query: 387 NFFNQMVKRGLQPRLATHAAFIK 409
+M KR L+ L + IK
Sbjct: 406 FVLEEMEKRKLEFDLESWETIIK 428
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 64/135 (47%), Gaps = 9/135 (6%)
Query: 314 GPR---DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYE 370
GP +L M Q C ++N +L VL N + +A ++ + P+ +T+
Sbjct: 120 GPEKAVELFNRMPQFNCTRTIQSFNALLNVLIDNDRFDEANDIFGKSYEMGFRPNTVTFN 179
Query: 371 IFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSAD- 429
I + G++ A F++M+++ +QP + T+ + I G+ R D K + L D
Sbjct: 180 IMVKGRLAKGEWGKACEVFDEMLQKRVQPSVVTYNSLI-GFLC--RKGDLDKAMALLEDM 236
Query: 430 --KYKSSSNMLYSLL 442
K K ++ + Y+LL
Sbjct: 237 GQKGKHANEVTYALL 251
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K R Y +I +C L +MR+ C P TY ++ L N ++ +
Sbjct: 278 KGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLE 337
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
+L EM R+C P+ TY + + C+ K D + N+M+++GL P + T+ A I+
Sbjct: 338 GMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIR 397
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
GY R E A + + L + Y+ L K + A +LS+M+++ L P
Sbjct: 398 GYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTP 457
Query: 470 NVSVYRRVL 478
++ Y ++
Sbjct: 458 SLVTYNSLI 466
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 79/180 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI C+ LL M C P + TYN ++ +CK G+ + ++E M
Sbjct: 532 YTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMS 591
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P TY I I R G FD A FNQMV G +P + T+ AFI Y +
Sbjct: 592 KMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVK 651
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + + ++ Y+LL S +++ A NVL M+ G P+ ++ ++
Sbjct: 652 EAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLI 711
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 75/183 (40%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI+ C + ++L M C P TYN ++ K A LL
Sbjct: 389 VVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLS 448
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML P +TY I C+ G FD A+ + + + GL P T++ FI
Sbjct: 449 KMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSK 508
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R E+A +K ++ ++Y+ L H K A ++L M PN S Y
Sbjct: 509 RMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYN 568
Query: 476 RVL 478
++
Sbjct: 569 SLI 571
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 3/116 (2%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
M+K +K T V+ Y ILI+EM R DF + +M G +P TY + C
Sbjct: 590 MSKMGVKPT---VATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCT 646
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
+G +A ++ M+ PD++TY + I R+G AFN +M+ G P
Sbjct: 647 SGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDP 702
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 88/213 (41%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
++K + K + YN LI C+ F LL +++ G P TY+ + LCK
Sbjct: 447 LSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCK 506
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
+ + +AC+L + + + + Y I C+ GK D A + +M P +T
Sbjct: 507 SKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSST 566
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
+ + I G + ++ V + + Y++L + + A V ++M+
Sbjct: 567 YNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMV 626
Query: 464 KNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSR 496
G +P+V Y + TS A+ + +R
Sbjct: 627 SFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMAR 659
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 126/299 (42%), Gaps = 16/299 (5%)
Query: 201 VIDNCGRLDD----YETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEV 256
+I C +DD + +RQ+ D N + L+ +++ L ++++ + + E+
Sbjct: 146 MIKACVSVDDIRFLLDFLRQMNRDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRVYTEM 205
Query: 257 LNQVGGSCLVSGVRALIEMFSVLG-LYEMAKYVIKKTERKVS----YYNILIKEMCRRCD 311
LN + + + + ++ +S +G + E YV K + +S Y LI CR D
Sbjct: 206 LNDMIVPNIYT-LNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNND 264
Query: 312 FKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEI 371
+ M GC ++Y ++ LC+ G+ + L ++M +C+P TY +
Sbjct: 265 VNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTV 324
Query: 372 FIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKY 431
I + + FN+M +R +P + T+ + + +++ + + +K
Sbjct: 325 IIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKG 384
Query: 432 KSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL------KHLHTS 484
S + Y+ L + + A +L M N RPN Y ++ KH+H +
Sbjct: 385 LVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKA 443
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 49/115 (42%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
S YN LI +C+ + ++ M ++G +P TY ++ + + G A + +
Sbjct: 565 STYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQ 624
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
M+ PD TY FI C G A +M++ G+ P T+ I Y
Sbjct: 625 MVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAY 679
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 52/128 (40%), Gaps = 5/128 (3%)
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNILIKEMC 307
+VE ++++G V+ LIE G ++ A V + + V Y I C
Sbjct: 586 MVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYC 645
Query: 308 RRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAI 367
+ K ++ M + G P +LTY ++ + G DA +L+ ML C P
Sbjct: 646 TSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHP 705
Query: 368 TYEIFIVY 375
+ I Y
Sbjct: 706 IWNNLIWY 713
>gi|218184813|gb|EEC67240.1| hypothetical protein OsI_34171 [Oryza sativa Indica Group]
Length = 458
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 88/192 (45%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
++ V Y+ +I +C+ ++L M + G P +TY+ +L C +GQ +
Sbjct: 233 RRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYSSILHGYCSSGQPKE 292
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
L +M P+ +TY + Y C+ G+ A F+ M KRGL+P +AT+ ++
Sbjct: 293 DIGTLNKMRSDGVEPNVVTYRSLMNYLCKNGRCTKARKIFDSMTKRGLEPDIATYRTLLQ 352
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
GY + + + L + ++++L + K A V S+M ++GL P
Sbjct: 353 GYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNP 412
Query: 470 NVSVYRRVLKHL 481
NV Y V+ L
Sbjct: 413 NVVCYGTVIDVL 424
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 82/188 (43%), Gaps = 5/188 (2%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEM---RQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
IL+K +C + +LL M R G P ++Y V+ K G A E
Sbjct: 170 TILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHE 229
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
MLGR P+ +TY I C+ D A N MVK G+ P T+++ + GY +
Sbjct: 230 MLGRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYSSILHGYCSSGQ 289
Query: 417 -YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
ED + +D + + SL+ L KN A+ + M K GL P+++ YR
Sbjct: 290 PKEDIGTLNKMRSDGVEPNVVTYRSLMNYLC-KNGRCTKARKIFDSMTKRGLEPDIATYR 348
Query: 476 RVLKHLHT 483
+L+ T
Sbjct: 349 TLLQGYAT 356
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 8/173 (4%)
Query: 313 KGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML---GRNCHPDAITY 369
+G R +L E+ G ++N L + ++ A A L M PD TY
Sbjct: 40 EGARHVLDELPLRGWGASIYSFNRTLTDVARD-SPAAAVSLFNRMARAGADEVTPDLCTY 98
Query: 370 EIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSAD 429
I I CR G+ D+ F ++K+G + T A +KG R DA V+
Sbjct: 99 SILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFAPLLKGLCADKRTSDAMDIVLRRMT 158
Query: 430 KYKSSSNMLYS--LLASLHDKNNNPVMAK--NVLSEMMKNGLRPNVSVYRRVL 478
+ ++ LL L D+N + + +++++ G P+V Y V+
Sbjct: 159 ELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVI 211
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 81/212 (38%), Gaps = 39/212 (18%)
Query: 279 LGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE-MRQVGCEPITLTYNYV 337
LG + + K + + L+K +C D+++ M ++ C P + +
Sbjct: 113 LGFAALGNVIKKGFRVEAITFAPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTIL 172
Query: 338 LGVLCKNGQDADACELLEEML---GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
L LC + +A ELL M G PD ++Y I + G D A++ +++M+
Sbjct: 173 LKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLG 232
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM 454
R + P + T+++ I A DK
Sbjct: 233 RRISPNVVTYSSIIAAL-----------------------------CKAQAMDK------ 257
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
A VL+ M+KNG+ P+ Y +L +S Q
Sbjct: 258 AMEVLNTMVKNGVMPDCMTYSSILHGYCSSGQ 289
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPI 330
AL+EM ++L L M + I+ +NILI ++ + +MRQ G P
Sbjct: 359 ALVEMHALLDL--MVRNGIQPDHH---VFNILICAYAKQEKVDQAMLVFSKMRQHGLNPN 413
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAI 367
+ Y V+ VLCK+G DA E+M+ P+ I
Sbjct: 414 VVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNII 450
>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g31400, chloroplastic; Flags: Precursor
gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
Length = 918
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 106/240 (44%), Gaps = 20/240 (8%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEM 306
R+ E G V ALI + GL+E A V + + YN +I +
Sbjct: 254 RIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVI-DA 312
Query: 307 CRR--CDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHP 364
C + +FK EM++ G +P +T+N +L V + G A L +EM R
Sbjct: 313 CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQ 372
Query: 365 DAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA---- 420
D +Y + C+ G+ D+AF QM + + P + +++ I G+ R+++A
Sbjct: 373 DVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLF 432
Query: 421 --YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+Y+ ++ D+ Y+ L S++ K A ++L EM G++ +V Y +L
Sbjct: 433 GEMRYLGIALDRVS------YNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALL 486
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 91/201 (45%), Gaps = 12/201 (5%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
+A+ +K+ V Y+ +I + F +L EMR +G ++YN +L + K
Sbjct: 397 LAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTK 456
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
G+ +A ++L EM D +TY + + GK+D F +M + + P L T
Sbjct: 457 VGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLT 516
Query: 404 HAAFIKGYFIFYRYEDA------YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKN 457
++ I GY Y++A +K L AD +LYS L KN A +
Sbjct: 517 YSTLIDGYSKGGLYKEAMEIFREFKSAGLRADV------VLYSALIDALCKNGLVGSAVS 570
Query: 458 VLSEMMKNGLRPNVSVYRRVL 478
++ EM K G+ PNV Y ++
Sbjct: 571 LIDEMTKEGISPNVVTYNSII 591
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 3/131 (2%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L EMA IKK V YN L+ ++ + + + EM++ P LTY+ ++
Sbjct: 467 LREMASVGIKK---DVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDG 523
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
K G +A E+ E D + Y I C+ G A + ++M K G+ P
Sbjct: 524 YSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPN 583
Query: 401 LATHAAFIKGY 411
+ T+ + I +
Sbjct: 584 VVTYNSIIDAF 594
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 87/212 (41%), Gaps = 10/212 (4%)
Query: 184 MREIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSK 243
++ IMP N S VID + ++ L + + L+ ++ L + +
Sbjct: 402 VKRIMP----NVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKV 457
Query: 244 ALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSY 298
+++ + ++ + VG V AL+ + G Y+ K V + +R+ +
Sbjct: 458 GRSEEAL-DILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLT 516
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ LI + +K ++ E + G + Y+ ++ LCKNG A L++EM
Sbjct: 517 YSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMT 576
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN 390
P+ +TY I R D + ++ N
Sbjct: 577 KEGISPNVVTYNSIIDAFGRSATMDRSADYSN 608
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 96/209 (45%), Gaps = 1/209 (0%)
Query: 283 EMAKYV-IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
++A+ V +K V +NILI +C+ D L EM+ GC P +TYN ++ L
Sbjct: 377 DLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNL 436
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
C G+ A +LL++M C ITY I C+ + + A F+QM +G+
Sbjct: 437 CSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNA 496
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
T I G + +DA++ + + +N+ Y+ + + + K + A ++L
Sbjct: 497 ITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILET 556
Query: 462 MMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
M NG +V Y ++ L + + +A
Sbjct: 557 MTANGFEVDVVTYGTLINGLCKAGRTQVA 585
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 78/185 (42%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
++ +N LI +C + DL ++ G P T+N ++ LCK G A L E
Sbjct: 356 ITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFE 415
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM C PD +TY I C +GK A + M G T+ I G
Sbjct: 416 EMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKM 475
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R E+A + + S + + ++ L K+ A ++++M+ GL+PN Y
Sbjct: 476 RIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYN 535
Query: 476 RVLKH 480
+L H
Sbjct: 536 SILTH 540
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 78/182 (42%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N+LI C+ + + + G EP +TYN + LC+N A ++++ M+
Sbjct: 255 NVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQ 314
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
PD TY I + C+ G+ + A NQMV RG P + T I R E+
Sbjct: 315 EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEE 374
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
A K S +++L + K +P +A + EM +G P+ Y ++
Sbjct: 375 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 434
Query: 480 HL 481
+L
Sbjct: 435 NL 436
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 80/194 (41%), Gaps = 1/194 (0%)
Query: 289 IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
++ R +N LI +C+ +L+ +M G +P +TYN +L CK G
Sbjct: 489 LQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIK 548
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
A ++LE M D +TY I C+ G+ VA M +G++P + +
Sbjct: 549 KAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVL 608
Query: 409 KGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM-AKNVLSEMMKNGL 467
+ F DA A+ + + Y ++ + P+ A + + EM+ G
Sbjct: 609 QSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGF 668
Query: 468 RPNVSVYRRVLKHL 481
P S +R + + L
Sbjct: 669 IPEFSSFRMLAEGL 682
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 5/162 (3%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNILIKEM 306
RV + ++G S V LI + LG E A I++ E YN + +
Sbjct: 237 RVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGL 296
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
C+ ++ M Q G +P TYN V+ LCKNGQ +A +L +M+ R C PD
Sbjct: 297 CQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDI 356
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
T+ I C + + A + Q+ +G+ P + T I
Sbjct: 357 TTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILI 398
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 90/216 (41%), Gaps = 3/216 (1%)
Query: 283 EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLC 342
EM IK V +N L+K +CR + +L EM G P T+ ++
Sbjct: 171 EMGARGIKP---DVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFV 227
Query: 343 KNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLA 402
+ G A + ML C +T + I C++G+ + A + Q + G +P
Sbjct: 228 EEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQI 287
Query: 403 THAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM 462
T+ F+ G A K + + + Y+++ + KN AK +L++M
Sbjct: 288 TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 347
Query: 463 MKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYS 498
+ G P+++ + ++ L T ++ A L+ + +
Sbjct: 348 VDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVT 383
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 79/195 (40%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ + K + EM G +P +T+N ++ LC+ Q A +LEEM
Sbjct: 149 YNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMS 208
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R PD T+ + G + A +M++ G T I GY R E
Sbjct: 209 SRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVE 268
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA Y+ + Y+ + +N++ A V+ M++ G P+V Y V+
Sbjct: 269 DALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVV 328
Query: 479 KHLHTSHQEHMAKCL 493
L + Q AK +
Sbjct: 329 NCLCKNGQLEEAKGI 343
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 76/190 (40%), Gaps = 11/190 (5%)
Query: 312 FKGPRDLLVEMRQ--VGCEPITLTYNYVLGVLCKNGQDADACELLE----EMLGRNCHPD 365
F DL++ Q G + T+ YN++L VL + + +LLE EM R PD
Sbjct: 125 FDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSK----MKLLESVYSEMGARGIKPD 180
Query: 366 AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV 425
+T+ + CR + A +M RG+ P T ++G+ E A +
Sbjct: 181 VVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKA 240
Query: 426 LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL-HTS 484
+ S++ + ++L + + K A + + + +G P+ Y + L
Sbjct: 241 RMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQND 300
Query: 485 HQEHMAKCLS 494
H H K +
Sbjct: 301 HVGHALKVMD 310
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 4/157 (2%)
Query: 347 DADAC-ELLEEMLGRN-CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
D DA +L L R+ P YE I VG D+ +M + G Q +L
Sbjct: 53 DPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVV 112
Query: 405 AAFIKGYFIFYRYEDAYKYVV--LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM 462
+F+ Y ++DA ++ L + ++Y+ L ++ + + + ++V SEM
Sbjct: 113 HSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEM 172
Query: 463 MKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSS 499
G++P+V + ++K L +HQ A + SS
Sbjct: 173 GARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSS 209
>gi|255660958|gb|ACU25648.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 348
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 104/234 (44%), Gaps = 7/234 (2%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEM 306
V+E+ Q GG A+I + A YV+ + V YN LI +
Sbjct: 115 HVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSGCKPNVHVYNTLINGL 174
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
F+ + EM + C P +TYN ++ LCKN +A L++E+L + P
Sbjct: 175 VGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLDPGV 234
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
ITY + + C K + A +NQ+ +G +P + H I G + + A +
Sbjct: 235 ITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALS-LYF 293
Query: 427 SADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
+++K + N++ ++ L K+ + A + + +++NGL P++ Y LK
Sbjct: 294 DMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLK 347
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 97/226 (42%)
Query: 282 YEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+E+ + + + R VS +NI+++ + + M++ G ++TY ++
Sbjct: 45 FELWEMMGSEGNRSVSSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGF 104
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
CKNG + +LE + DA Y I C+ D A N M+K G +P +
Sbjct: 105 CKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSGCKPNV 164
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
+ I G ++EDA + + S + + Y+ L + KN A N++ E
Sbjct: 165 HVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKE 224
Query: 462 MMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSVE 507
++ GL P V Y ++K L H+ A L ++ +S V+
Sbjct: 225 LLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQ 270
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 96/209 (45%), Gaps = 1/209 (0%)
Query: 283 EMAKYV-IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
++A+ V +K V +NILI +C+ D L EM+ GC P +TYN ++ L
Sbjct: 377 DLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNL 436
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
C G+ A +LL++M C ITY I C+ + + A F+QM +G+
Sbjct: 437 CSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNA 496
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
T I G + +DA++ + + +N+ Y+ + + + K + A ++L
Sbjct: 497 ITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILET 556
Query: 462 MMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
M NG +V Y ++ L + + +A
Sbjct: 557 MTANGFEVDVVTYGTLINGLCKAGRTQVA 585
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 78/185 (42%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
++ +N LI +C + DL ++ G P T+N ++ LCK G A L E
Sbjct: 356 ITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFE 415
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM C PD +TY I C +GK A + M G T+ I G
Sbjct: 416 EMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKM 475
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R E+A + + S + + ++ L K+ A ++++M+ GL+PN Y
Sbjct: 476 RIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYN 535
Query: 476 RVLKH 480
+L H
Sbjct: 536 SILTH 540
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 78/182 (42%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N+LI C+ + + + G EP +TYN + LC+N A ++++ M+
Sbjct: 255 NVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQ 314
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
PD TY I + C+ G+ + A NQMV RG P + T I R E+
Sbjct: 315 EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEE 374
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
A K S +++L + K +P +A + EM +G P+ Y ++
Sbjct: 375 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 434
Query: 480 HL 481
+L
Sbjct: 435 NL 436
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 80/194 (41%), Gaps = 1/194 (0%)
Query: 289 IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
++ R +N LI +C+ +L+ +M G +P +TYN +L CK G
Sbjct: 489 LQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIK 548
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
A ++LE M D +TY I C+ G+ VA M +G++P + +
Sbjct: 549 KAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVL 608
Query: 409 KGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM-AKNVLSEMMKNGL 467
+ F DA A+ + + Y ++ + P+ A + + EM+ G
Sbjct: 609 QSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGF 668
Query: 468 RPNVSVYRRVLKHL 481
P S +R + + L
Sbjct: 669 IPEFSSFRMLAEGL 682
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 90/216 (41%), Gaps = 3/216 (1%)
Query: 283 EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLC 342
EM IK V +N L+K +CR + +L EM G P T+ ++
Sbjct: 171 EMGARGIKP---DVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFV 227
Query: 343 KNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLA 402
+ G A + ML C +T + I C++G+ + A + Q + G +P
Sbjct: 228 EEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQI 287
Query: 403 THAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM 462
T+ F+ G A K + + + Y+++ + KN AK +L++M
Sbjct: 288 TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 347
Query: 463 MKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYS 498
+ G P+++ + ++ L T ++ A L+ + +
Sbjct: 348 VDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVT 383
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 5/162 (3%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNILIKEM 306
RV + ++G S V LI + LG E A I++ E YN + +
Sbjct: 237 RVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGL 296
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
C+ ++ M Q G +P TYN V+ LCKNGQ +A +L +M+ R C PD
Sbjct: 297 CQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDI 356
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
T+ I C + + A + Q+ +G+ P + T I
Sbjct: 357 TTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILI 398
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 79/195 (40%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ + K + EM G +P +T+N ++ LC+ Q A +LEEM
Sbjct: 149 YNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMS 208
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R PD T+ + G + A +M++ G T I GY R E
Sbjct: 209 SRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVE 268
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA Y+ + Y+ + +N++ A V+ M++ G P+V Y V+
Sbjct: 269 DALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVV 328
Query: 479 KHLHTSHQEHMAKCL 493
L + Q AK +
Sbjct: 329 NCLCKNGQLEEAKGI 343
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 76/190 (40%), Gaps = 11/190 (5%)
Query: 312 FKGPRDLLVEMRQ--VGCEPITLTYNYVLGVLCKNGQDADACELLE----EMLGRNCHPD 365
F DL++ Q G + T+ YN++L VL + + +LLE EM R PD
Sbjct: 125 FDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSK----MKLLESVYSEMGARGIKPD 180
Query: 366 AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV 425
+T+ + CR + A +M RG+ P T ++G+ E A +
Sbjct: 181 VVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKA 240
Query: 426 LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL-HTS 484
+ S++ + ++L + + K A + + + +G P+ Y + L
Sbjct: 241 RMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQND 300
Query: 485 HQEHMAKCLS 494
H H K +
Sbjct: 301 HVGHALKVMD 310
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 4/157 (2%)
Query: 347 DADAC-ELLEEMLGRN-CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
D DA +L L R+ P YE I VG D+ +M + G Q +L
Sbjct: 53 DPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVV 112
Query: 405 AAFIKGYFIFYRYEDAYKYVV--LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM 462
+F+ Y ++DA ++ L + ++Y+ L ++ + + + ++V SEM
Sbjct: 113 HSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEM 172
Query: 463 MKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSS 499
G++P+V + ++K L +HQ A + SS
Sbjct: 173 GARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSS 209
>gi|410109949|gb|AFV61054.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
turbinata]
Length = 413
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ +L EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 194 VYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYK 253
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
ML ++ PD ITY I C+ G A + ++M +GL+P T+ I G
Sbjct: 254 RMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEG 313
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ A+K+ + ++ Y+ L S + V A+ +L EM+ GL+P++ Y
Sbjct: 314 DLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAEKMLREMLSVGLKPDIGTYT 373
Query: 476 RVL 478
++
Sbjct: 374 MII 376
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 83/188 (44%), Gaps = 14/188 (7%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ C+ D + + + + + G P ++YN ++ + G + L M
Sbjct: 126 FFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAM 185
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
L PD TY + I C+ K D A F++M+ +GL P T I G+ R
Sbjct: 186 LANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGR- 244
Query: 418 EDAYKYVVLSADKYKS--SSNML-----YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
V L+ + YK S ++L Y+ L KN + A +++ EM GL+P+
Sbjct: 245 ------VDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPD 298
Query: 471 VSVYRRVL 478
Y ++
Sbjct: 299 KFTYTTLI 306
>gi|356556194|ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 829
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 77/164 (46%), Gaps = 2/164 (1%)
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
R L E++ G +P T+TYN +L V K G +A +L+EM NC PD++TY
Sbjct: 306 RKFLAELKFNGYKPGTVTYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSVTYNELAAT 365
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
R G D + M +G+ P T+ I Y R +DA + L D + +
Sbjct: 366 YVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAPN 425
Query: 436 NMLY-SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
Y S+LA L K+ + K VL EM NG PN + + +L
Sbjct: 426 VYTYNSVLAMLGKKSRTEDVIK-VLCEMKLNGCAPNRATWNTML 468
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 90/219 (41%), Gaps = 1/219 (0%)
Query: 289 IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
++K V Y ++ R +K DL +M+++G +P +TYN +L V K G+
Sbjct: 208 VEKYSLDVRAYTTILHSYARTGKYKRAIDLFGKMKEIGLDPTLVTYNVMLDVYGKMGRSW 267
Query: 349 DAC-ELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAF 407
D ELL+EM + D T I R G D A F ++ G +P T+ +
Sbjct: 268 DRILELLDEMRSKGLELDEFTCSTVISACGREGMLDEARKFLAELKFNGYKPGTVTYNSM 327
Query: 408 IKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
++ + Y +A + D ++ Y+ LA+ + + V+ M G+
Sbjct: 328 LQVFGKAGIYTEALSILKEMEDNNCPPDSVTYNELAATYVRAGFLDEGMAVIDTMTSKGV 387
Query: 468 RPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
PN Y V+ + +E A L S L +V
Sbjct: 388 MPNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNV 426
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 66/145 (45%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N ++ R F R++L + + G +P TYN ++ + + G+ A E+L+ +
Sbjct: 640 NSMLSMFARNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQN 699
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
PD ++Y I CR G A ++M +G+QP + T+ F+ GY +++
Sbjct: 700 SGPEPDVVSYNTVIKGFCRKGLMQEAIGVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDE 759
Query: 420 AYKYVVLSADKYKSSSNMLYSLLAS 444
A + + + S + Y +L
Sbjct: 760 ANEVIRFMIEHNCRPSELTYKILVD 784
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 85/192 (44%), Gaps = 5/192 (2%)
Query: 238 VLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIK-----KT 292
VL + K +G+ R + L + G + + +++ MF+ ++ A+ ++
Sbjct: 608 VLTNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFARNKMFSKAREMLHFIHECGL 667
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
+ + YN L+ R + ++L ++ G EP ++YN V+ C+ G +A
Sbjct: 668 QPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEAIG 727
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+L EM + P +TY F+ + FD A M++ +P T+ + GY
Sbjct: 728 VLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGYC 787
Query: 413 IFYRYEDAYKYV 424
+YE+A +V
Sbjct: 788 KAGKYEEAMDFV 799
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 66/158 (41%), Gaps = 2/158 (1%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M+ +GC P TYN VL +L K + D ++L EM C P+ T+ + GK
Sbjct: 417 MKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGK 476
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSNMLYS 440
+ +M G +P T I Y D+ K Y + + +
Sbjct: 477 HNYVNKVLREMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNA 536
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
LL +L + + A++V+ +M G +PN + Y +L
Sbjct: 537 LLNALARRGDWKA-AESVIQDMRTKGFKPNENSYSLLL 573
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 76/181 (41%), Gaps = 2/181 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +++ + + +L EM C P ++TYN + + G + +++ M
Sbjct: 324 YNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSVTYNELAATYVRAGFLDEGMAVIDTMT 383
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+AITY I + G+ D A F+ M G P + T+ + + R E
Sbjct: 384 SKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTE 443
Query: 419 DAYKYVV-LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
D K + + + + ++LA ++ + + K VL EM G P+ + +
Sbjct: 444 DVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNK-VLREMKNCGFEPDKDTFNTL 502
Query: 478 L 478
+
Sbjct: 503 I 503
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 81/186 (43%), Gaps = 6/186 (3%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN ++ + ++ + +L EM+ GC P T+N +L V + G+ ++L
Sbjct: 426 VYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLR 485
Query: 356 EMLGRNC--HPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
EM +NC PD T+ I R G + + +MVK G P + T+ A +
Sbjct: 486 EM--KNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAR 543
Query: 414 FYRYEDAYKYVV-LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
++ A + + +K + N YSLL + K N + V E+ + P+
Sbjct: 544 RGDWKAAESVIQDMRTKGFKPNENS-YSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSWI 602
Query: 473 VYRRVL 478
+ R ++
Sbjct: 603 LLRTLV 608
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 77/184 (41%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V+ YN L+ + RR D+K ++ +MR G +P +Y+ +L K G ++ +
Sbjct: 531 VTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEK 590
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
E+ + P I ++ + + F+Q+ K G +P L + + +
Sbjct: 591 EIYDGHVFPSWILLRTLVLTNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFARNK 650
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ A + + + + Y+ L L+ + A+ VL + +G P+V Y
Sbjct: 651 MFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYN 710
Query: 476 RVLK 479
V+K
Sbjct: 711 TVIK 714
>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1023
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 8/206 (3%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LIK + R + PR + M ++G P +TYN ++ C G+ DA ++L
Sbjct: 636 VVAYNALIKGLLRLGKYD-PRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILN 694
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM P+A+TY I I C+ G + A + ++M+ P TH +K Y
Sbjct: 695 EMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAY---S 751
Query: 416 RYEDAYKYVVLSADKYKSS---SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
R E A K + + S S +Y+ L ++ + AK VL EM+K G+ ++
Sbjct: 752 RSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLV 811
Query: 473 VYRRVLKHLHT-SHQEHMAKCLSSRY 497
Y +++ T SH E K S +
Sbjct: 812 TYNALIRGYCTGSHVEKALKTYSQMF 837
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 99/220 (45%), Gaps = 20/220 (9%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
AL++ + LG E+A+ V++K E++ V ++ +I ++ D+L EM Q
Sbjct: 466 ALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQR 525
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
P T+ Y ++ K G+ A + +EM R + ++I + RVG+ D A
Sbjct: 526 NVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEA 585
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLAS- 444
+ M +G+ P + +A+ I GYF ++ + LS + N+ + ++A
Sbjct: 586 RSLIIDMYSKGIDPDIVNYASLIDGYF-----KEGNQLAALSIVQEMKEKNIRFDVVAYN 640
Query: 445 ------LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
L +P + V S M++ GL P+ Y ++
Sbjct: 641 ALIKGLLRLGKYDP---RYVCSRMIELGLAPDCITYNTII 677
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 82/183 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ L+ C+ + +L +M + P +T++ ++ K G + A ++L EM+
Sbjct: 464 YSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMV 523
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
RN P+ I Y I I + G+ DVA +F +M R L+ + R +
Sbjct: 524 QRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMD 583
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A ++ K + Y+ L + K N + A +++ EM + +R +V Y ++
Sbjct: 584 EARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALI 643
Query: 479 KHL 481
K L
Sbjct: 644 KGL 646
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 86/185 (46%), Gaps = 2/185 (1%)
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
CR L EM ++G +P ++Y ++ L K+G+ +A L +M+ R D
Sbjct: 367 CRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDI 426
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
+T + +VGK A F ++K L P T++A + GY + E A + V+
Sbjct: 427 VTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELA-ELVLQ 485
Query: 427 SADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSH 485
+K N++ +S + + + K A +VL EM++ + PN VY ++ +
Sbjct: 486 KMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAG 545
Query: 486 QEHMA 490
++ +A
Sbjct: 546 EQDVA 550
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 85/191 (44%), Gaps = 2/191 (1%)
Query: 289 IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
IK + + Y LI C+ + L +M G P +T + +L C++G+
Sbjct: 314 IKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLT 373
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
+A L EM P+ ++Y I + G+ AFN +QMV RG+ + T +
Sbjct: 374 EAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVM 433
Query: 409 KGYFIFYRYEDAYKYVVLSADKYKSSSN-MLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
G F + ++A + V + K + N + YS L + K +A+ VL +M K +
Sbjct: 434 DGLFKVGKTKEA-EEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHV 492
Query: 468 RPNVSVYRRVL 478
PNV + ++
Sbjct: 493 PPNVITFSSII 503
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 80/194 (41%), Gaps = 17/194 (8%)
Query: 235 FLPVLISSKALTK--------KGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAK 286
F+P I+ K L K I ++ E L G ++ LI +F LG+ AK
Sbjct: 736 FVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAK 795
Query: 287 YVIKK-TERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
V+ + +R +S YN LI+ C + +M G P TYN +LG L
Sbjct: 796 VVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGL 855
Query: 342 CKNG----QDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
G + +L+ EM R P+A TY+I + RVG +M+ +G
Sbjct: 856 SNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGF 915
Query: 398 QPRLATHAAFIKGY 411
P L T+ I Y
Sbjct: 916 VPTLKTYNVLISDY 929
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 70/180 (38%), Gaps = 24/180 (13%)
Query: 266 VSGVRALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPR---- 316
V G+ LI+ + GL A +I+ + R + YN L+K C+ D
Sbjct: 232 VIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFN 291
Query: 317 ---------------DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
D++ + +P +TY ++ CK ++ L ++M+
Sbjct: 292 EILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNG 351
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
PD +T + CR GK A F +M + GL P ++A I F R +A+
Sbjct: 352 IMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAF 411
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 67/146 (45%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P +TY+ +L CK G+ A +L++M + P+ IT+ I + G A +
Sbjct: 459 PNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDV 518
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
+MV+R + P +A I GYF + A + + SN+++ +L + +
Sbjct: 519 LREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKR 578
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVY 474
A++++ +M G+ P++ Y
Sbjct: 579 VGRMDEARSLIIDMYSKGIDPDIVNY 604
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+IL+ R + K L +EM G P TYN ++ K+G+ +A ELL ++L
Sbjct: 887 YDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLL 946
Query: 359 GRNCHPDAITYEIF 372
+ P++ TY+I
Sbjct: 947 TKGRIPNSFTYDIL 960
>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 8/210 (3%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
Y M + +K T V YN ++ + F+ + M++ G EP TYN +L
Sbjct: 134 FYRMQDFRVKPT---VKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKA 190
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
LCKN + A +LL EM + C PD ++Y I C++GK A + + P
Sbjct: 191 LCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA-----RELAMSFTPS 245
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
+ + A I G Y +E+A++ + +K + + Y+ + + N ++ VL+
Sbjct: 246 VPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLA 305
Query: 461 EMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
+M G PN+ + ++K H A
Sbjct: 306 KMFARGCSPNLHTFTSLIKGFFLKGGSHEA 335
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 57/129 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ LI + D G ++ M GC P + Y ++ VLC+N A L+E
Sbjct: 386 VRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIE 445
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M NC P+ +T+ FI C G+ D A F+QM G P T+ +
Sbjct: 446 NMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDR 505
Query: 416 RYEDAYKYV 424
R+ +A+ V
Sbjct: 506 RFGEAFGLV 514
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 90/223 (40%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPI 330
LI LG + A+ + V YN LI +C+ F+ LL EM G +P
Sbjct: 221 TLISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPN 280
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN 390
++Y ++ L G + +L +M R C P+ T+ I G A +F++
Sbjct: 281 VISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWD 340
Query: 391 QMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNN 450
+M++ G+ P + + A + G DA + YS L + K
Sbjct: 341 RMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAG 400
Query: 451 NPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
+ A V + M+ +G PNV Y ++ L + + A CL
Sbjct: 401 DLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCL 443
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 13/191 (6%)
Query: 234 GFLPVLISSKAL-----TKKGIWRVVEVLNQ--VGGSCL-VSGVRALIEMFS----VLGL 281
G +P +++ AL +K+ + V V NQ + G C V ALI+ ++ + G
Sbjct: 346 GVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGA 405
Query: 282 YEMAKYVIKKT-ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
E+ ++I V Y ++ +CR F L+ M+ C P T+T+N +
Sbjct: 406 SEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKG 465
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
LC +G+ A ++ ++M C P+ TY + + +F AF M RG++
Sbjct: 466 LCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELN 525
Query: 401 LATHAAFIKGY 411
L T+ I GY
Sbjct: 526 LVTYNTIIYGY 536
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 80/186 (43%), Gaps = 6/186 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N IK +C + +M GC P T TYN +L L K+ + +A L+++M
Sbjct: 459 FNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDME 518
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R + +TY I C G A +MV RG +P T I Y +
Sbjct: 519 HRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVN 578
Query: 419 DAYKYV-VLSADKYKSSSNMLYSLLASL--HDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
A + + LSA K+ SL++ + H ++ L M+ G+ PNV+ +
Sbjct: 579 IAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIV---YLRRMLSEGISPNVATWN 635
Query: 476 RVLKHL 481
+++HL
Sbjct: 636 VLVRHL 641
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 58/135 (42%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
+ E + YN +I C +LL +M G +P +T N V+ CK G+
Sbjct: 520 RGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNI 579
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A +L++ + HPD I Y I C + A + +M+ G+ P +AT ++
Sbjct: 580 AIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVR 639
Query: 410 GYFIFYRYEDAYKYV 424
F + A +++
Sbjct: 640 HLFSNMGHSGAVQFL 654
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 131/298 (43%), Gaps = 25/298 (8%)
Query: 199 SLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWR-VVEVL 257
SL+ CG D ET R+L ++ +V N + L + L + G WR E+L
Sbjct: 225 SLISAFCGE-GDIETGRELFDEMLRRKVSPNVVTYSCL-----MQGLGRTGRWREASEML 278
Query: 258 NQVGGSCLVSGVRALIEMFSVL--GLYEMAK----------YVIKKTERKVSYYNILIKE 305
+ GVR + ++VL GL + + V K E YN+++
Sbjct: 279 KDM----TARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNG 334
Query: 306 MCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH-- 363
+C+ ++ M + G +P +TYN +L LC G+ +A +L + +L H
Sbjct: 335 LCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVK 394
Query: 364 PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY 423
PD T I C+ G+ A + MV+ GLQ + T+ I+GY + +A K
Sbjct: 395 PDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKL 454
Query: 424 VVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + S ++M YS++ + K +A+ + +M +G+RP V Y ++ L
Sbjct: 455 WKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSL 512
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 83/192 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y++LI C+ + LL EM + G + Y+ ++ C G EL +EML
Sbjct: 188 YSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEML 247
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R P+ +TY + R G++ A M RG++P + + G R
Sbjct: 248 RRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAG 307
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA K + L K + + Y+++ + K + A V+ M+K G +P+ Y +L
Sbjct: 308 DAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLL 367
Query: 479 KHLHTSHQEHMA 490
K L + + H A
Sbjct: 368 KGLCGAGKIHEA 379
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 104/233 (44%), Gaps = 15/233 (6%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L EM + +K V Y+ LI C D + R+L EM + P +TY+ ++
Sbjct: 208 LEEMEREGLKA---DVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQG 264
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
L + G+ +A E+L++M R PD + Y + C+ G+ A + MV++G +P
Sbjct: 265 LGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPG 324
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL-------ASLHDKNNNPV 453
T+ + G R +DA+ V + K K + Y+ L +H+ +
Sbjct: 325 TLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMD--- 381
Query: 454 MAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
+ K +LSE K ++P+V +++ L + H A + S + L ++
Sbjct: 382 LWKLLLSE--KFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNI 432
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 74/160 (46%), Gaps = 5/160 (3%)
Query: 273 IEMFSVL-GLY-EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPI 330
++M SV GL+ +M I+ T V YN L+ +CR + R L EMR V
Sbjct: 480 MQMLSVARGLFCKMKDSGIRPT---VIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVD 536
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN 390
+++N ++ K G A ELL EM + PDA+T+ I I ++G D A +
Sbjct: 537 VVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYE 596
Query: 391 QMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADK 430
+MV G P + + +KGY + E + ADK
Sbjct: 597 KMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADK 636
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 84/202 (41%), Gaps = 8/202 (3%)
Query: 276 FSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM-RQVGCE-PITLT 333
FSVL L + + V N+++K CR L +M R C P +T
Sbjct: 97 FSVLSLMTKRGFGVN-----VYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVT 151
Query: 334 YNYVLGVLCKNGQDADACELLEEM-LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
YN ++ CK + A+A L E M G +C P+ +TY + I C+ G+ +M
Sbjct: 152 YNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEM 211
Query: 393 VKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNP 452
+ GL+ + +++ I + E + + S + + YS L +
Sbjct: 212 EREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRW 271
Query: 453 VMAKNVLSEMMKNGLRPNVSVY 474
A +L +M G+RP+V Y
Sbjct: 272 REASEMLKDMTARGVRPDVVAY 293
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 61/151 (40%), Gaps = 5/151 (3%)
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRN---CHPDAITYEIFIVYSCRVGKFDVAFNFFNQ 391
N VL C++GQ A L +M RN PD +TY + C+ + A F
Sbjct: 116 NLVLKGFCRSGQCDKAMSLFSQM-KRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEA 174
Query: 392 MVKRG-LQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNN 450
M K G +P L T++ I Y + + + + +YS L S
Sbjct: 175 MKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEG 234
Query: 451 NPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + + EM++ + PNV Y +++ L
Sbjct: 235 DIETGRELFDEMLRRKVSPNVVTYSCLMQGL 265
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%)
Query: 280 GLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
LY + V E V YN +I +C+ DLL M G P +TYN ++
Sbjct: 170 ALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLIS 229
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
LC +G+ DA ++ M R +PD T+ I + G+ A + +M++R L P
Sbjct: 230 GLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDP 289
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
+ T++ I G ++ R ++A + K + YS+L + + K+ +
Sbjct: 290 DIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLF 349
Query: 460 SEMMKNGLRPNVSVYRRVLK 479
EM + G+ N Y +++
Sbjct: 350 CEMSQRGVVRNTVTYTVLIQ 369
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 105/248 (42%), Gaps = 40/248 (16%)
Query: 185 REIMPEFYKNSDICSLVIDNC---GRLDD----YETM--RQLLNDFN-----VYQVCL-- 228
REI P+ + + + ID C GR+ + YE M R L D +Y +C+
Sbjct: 250 REIYPDVFTFNAL----IDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYS 305
Query: 229 ----NEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEM 284
E+ FGF+ ++K VV + G C V +++F EM
Sbjct: 306 RLDEAEQMFGFM--------VSKGCFPDVVTYSILINGYCKSKKVEHGMKLFC-----EM 352
Query: 285 AKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKN 344
++ + R Y +LI+ CR ++ M G P +TYN +L LC N
Sbjct: 353 SQ---RGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDN 409
Query: 345 GQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
G+ A +L +M D +TY I I C+ G+ A++ + + +GL P + T+
Sbjct: 410 GKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTY 469
Query: 405 AAFIKGYF 412
A + G +
Sbjct: 470 TAMMLGLY 477
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 75/175 (42%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
NIL+ CR L +M ++G EP +T+ +L C+ + DA + + M+
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVE 179
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
P+ + Y I C+ + D A + N+M G++P T+ + I G R++D
Sbjct: 180 MGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDD 239
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
A + V + ++ L K A+ + EM++ L P++ Y
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTY 294
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 50/101 (49%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+L+ +C + +L +M++ G + +TYN ++ +CK G+ ADA +L +
Sbjct: 399 YNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLN 458
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
+ PD TY ++ + G A F +M + G+ P
Sbjct: 459 LKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILP 499
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
DL M Q P ++ +L + K + L E+M + T I +
Sbjct: 67 DLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCF 126
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA-YKYVVLSADKYKSSS 435
CR + +A +F +M+K G +P + T + + G+ R DA Y + + Y+ +
Sbjct: 127 CRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNV 186
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ----EHMAK 491
+ +++ L K+ A ++L+ M +G+RP+ Y ++ L S + M
Sbjct: 187 VIYNTIIDGLC-KSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVS 245
Query: 492 CLSSR 496
C++ R
Sbjct: 246 CMTKR 250
>gi|255542538|ref|XP_002512332.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548293|gb|EEF49784.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 619
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 119/278 (42%), Gaps = 20/278 (7%)
Query: 201 VIDNCGRLDDYETMRQLLNDFNVYQVCLN-----------EKAFGFLPVLISSKALTKKG 249
+++ G D++T+ LLN V C N + + L LI + A KG
Sbjct: 333 LVNAAGHERDFKTLHHLLNK-RVRDHCFNTTNTFKFITNTDNSLSVLDDLIQTLARLDKG 391
Query: 250 IWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRR 309
I R+ + C + ++ E ++ + +Y + S++ IL + ++
Sbjct: 392 IPRMSAYNMLIARLCKLDRIQ---ESLHIVHIMADEQYGLST----CSFHPIL-SSLTQK 443
Query: 310 CDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITY 369
+ ++ MR +G P +NY+L C NG DAC++++ + DA TY
Sbjct: 444 KKMEDSWKVIEMMRAIGVLPDLTAFNYLLTAYCYNGNLVDACKVMKRIEEEGLGADARTY 503
Query: 370 EIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSAD 429
+ ++ +CR GK + A +MV G+ +TH I Y A K+V++
Sbjct: 504 DALVLGACRTGKVEAALVVLRRMVDDGVHVLYSTHVHVINALLRLGCYVQATKFVMIFGG 563
Query: 430 KYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
+ + ++ +LAS K AK VL EM + GL
Sbjct: 564 RDIAFDTEIFGILASKLIKLERFEEAKLVLKEMEERGL 601
>gi|224127568|ref|XP_002329310.1| predicted protein [Populus trichocarpa]
gi|222870764|gb|EEF07895.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 81/181 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI CR D L M + G P +TYN +L LC+ G+ DA LL EM
Sbjct: 312 YTSLIDGYCRVNDLDEALRLKEVMSEKGLYPTVITYNSILRKLCEGGRLRDANILLNEMS 371
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R PD +T I C++G A ++MV GL+ T+ A I G+ +
Sbjct: 372 ERKIEPDNVTCNTLINAYCKIGDMRSALKVKDKMVGAGLKLDQFTYKALIHGFCKAKEID 431
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + + D S S YS L + K N + E+++ GL +VSVYR ++
Sbjct: 432 KAKELLFGMMDAGFSPSYCTYSWLVDSYCKQQNEEAVIKLPDELVRRGLCVDVSVYRALI 491
Query: 479 K 479
+
Sbjct: 492 R 492
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 82/188 (43%), Gaps = 4/188 (2%)
Query: 292 TERKVSYYNI----LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQD 347
+ERK+ N+ LI C+ D + + +M G + TY ++ CK +
Sbjct: 371 SERKIEPDNVTCNTLINAYCKIGDMRSALKVKDKMVGAGLKLDQFTYKALIHGFCKAKEI 430
Query: 348 ADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAF 407
A ELL M+ P TY + C+ + +++V+RGL ++ + A
Sbjct: 431 DKAKELLFGMMDAGFSPSYCTYSWLVDSYCKQQNEEAVIKLPDELVRRGLCVDVSVYRAL 490
Query: 408 IKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
I+ + + + A + + L DK +++Y+ LA + K + ++L EM K L
Sbjct: 491 IRRFCKIEKIDCAQRVLGLMKDKGIFGDSVVYTSLAYGYWKVGKVNVTSDILDEMYKKRL 550
Query: 468 RPNVSVYR 475
+ +YR
Sbjct: 551 MITLKIYR 558
>gi|414887035|tpg|DAA63049.1| TPA: crs2 associated factor1 [Zea mays]
Length = 668
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 127/297 (42%), Gaps = 24/297 (8%)
Query: 199 SLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIW-RVVEVL 257
SL++D R +E+ R LL + V ++ F +L + +G W + VL
Sbjct: 338 SLLVDAYTRAGRWESARILLKEMEADGV--KPSSYVFSRILAGFR---DRGDWQKAFAVL 392
Query: 258 NQVGGSCLVSGVRALIEMFSVL----GLYEMAKYVI--------KKTERKVSYYNILIKE 305
++ S GVR ++V+ G Y + + + E V +N LI
Sbjct: 393 REMQAS----GVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDA 448
Query: 306 MCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPD 365
C+ +L EMR+ C P T TYN ++ +L + +L EM + P+
Sbjct: 449 HCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPN 508
Query: 366 AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV- 424
ITY + R G++ A + M GL+P + A + Y + A V
Sbjct: 509 IITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVK 568
Query: 425 VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ AD + S +L SL+ + ++ V A +VL M +NGLRP+V Y ++K L
Sbjct: 569 AMKADGLEVSILVLNSLINAF-GEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKAL 624
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 68/340 (20%), Positives = 125/340 (36%), Gaps = 45/340 (13%)
Query: 178 LCFLKYMRE--IMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGF 235
L L +RE +P+ S + + ++ N D + +LL D ++ + F
Sbjct: 175 LRLLSLLREHDFLPDLASYSHLLASLL-NTRDPPDAALLERLLGDLRESRLEPDAPLFSD 233
Query: 236 LPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAK------YVI 289
L + AL + ++ +G + + V ALI G A+ ++
Sbjct: 234 LISAFARAALPDAAL-ELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLA 292
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQ--- 346
+ + + YN L+K R K +L EM Q G P TY+ ++ + G+
Sbjct: 293 GEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWES 352
Query: 347 --------DAD------------------------ACELLEEMLGRNCHPDAITYEIFIV 374
+AD A +L EM PD Y + I
Sbjct: 353 ARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMID 412
Query: 375 YSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSS 434
+ A + FN+M + G++P + T I + R++ A + +
Sbjct: 413 TFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPP 472
Query: 435 SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
Y+++ +L + + + +LSEM + GL PN+ Y
Sbjct: 473 GTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITY 512
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 4/161 (2%)
Query: 263 SCLVSGVRALIEMFSVLGLY-EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
+CL+ G + L L+ E+ K+ I V Y+ILIK +C + LL E
Sbjct: 337 NCLIDGYCKAGNLSEALSLHSEIEKHEILP---DVFTYSILIKGLCGVDRMEEADGLLQE 393
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M++ G P +TYN ++ CK G A E+ +M + P+ IT+ I C+ GK
Sbjct: 394 MKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGK 453
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
+ A + +MV +GL P + + A I G+F ++A++
Sbjct: 454 MEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFR 494
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 77/183 (42%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V + ILI +C+ + R L++M G P YN ++ CK G ++A L
Sbjct: 298 VVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHS 357
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
E+ PD TY I I C V + + A +M K+G P T+ I GY
Sbjct: 358 EIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEG 417
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A + +K + + +S L + K A + +EM+ GL P+V Y
Sbjct: 418 NMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYT 477
Query: 476 RVL 478
++
Sbjct: 478 ALI 480
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 97/245 (39%), Gaps = 11/245 (4%)
Query: 244 ALTKKG----IWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMA-----KYVIKKTER 294
L KKG +W+V + G S V LI+ G + A + + KK
Sbjct: 167 GLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFP 226
Query: 295 KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
V Y ILI+ +C + MR G P TYN ++ CK A EL
Sbjct: 227 TVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELY 286
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
+EMLG P+ +T+ I I C+ + A F M G+ P + + I GY
Sbjct: 287 QEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKA 346
Query: 415 YRYEDAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
+A + +K++ ++ YS+L + A +L EM K G PN
Sbjct: 347 GNLSEALS-LHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVT 405
Query: 474 YRRVL 478
Y ++
Sbjct: 406 YNTLI 410
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 102/249 (40%), Gaps = 12/249 (4%)
Query: 199 SLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAF-----GFLPVLISSKALTKKGIWRV 253
++ID + D+ + R+ L D + V N + G+ S+AL+
Sbjct: 302 GILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEK 361
Query: 254 VEVLNQVGG-SCLVSGVRALIEMFSVLGLY-EMAKYVIKKTERKVSYYNILIKEMCRRCD 311
E+L V S L+ G+ + M GL EM K K YN LI C+ +
Sbjct: 362 HEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKK---KGFLPNAVTYNTLIDGYCKEGN 418
Query: 312 FKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEI 371
+ ++ +M + G EP +T++ ++ CK G+ A L EM+ + PD + Y
Sbjct: 419 MEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTA 478
Query: 372 FIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV--LSAD 429
I + G AF +M + GL P + T + I G R DA K + D
Sbjct: 479 LIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTD 538
Query: 430 KYKSSSNML 438
S +N L
Sbjct: 539 TTGSKTNEL 547
>gi|255568998|ref|XP_002525469.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535282|gb|EEF36959.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 581
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 63/125 (50%), Gaps = 3/125 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LIK +CR R L EM Q G P TY+ L + G++ A LLE M
Sbjct: 377 YNSLIKPLCRARKIDEARGLFDEMLQHGHSPTIRTYHAFFRSL-RTGEEVFA--LLENMR 433
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
CHP TY + I CR +FD F +NQ+ + GL P +++ I G F+ + E
Sbjct: 434 KLGCHPTIDTYIMLIRKFCRWRQFDDVFKLWNQISENGLGPDRSSYIVLIHGLFLNGKLE 493
Query: 419 DAYKY 423
+AYK+
Sbjct: 494 EAYKF 498
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M++VG EP YN V+ L K ++A L++ M + P+ +TY I CR
Sbjct: 329 QMKEVGIEPDRKIYNSVIFALAKGRHVSEAINLMKTMEEKGIAPNTVTYNSLIKPLCRAR 388
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
K D A F++M++ G P + T+ AF +
Sbjct: 389 KIDEARGLFDEMLQHGHSPTIRTYHAFFR 417
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 63/157 (40%), Gaps = 1/157 (0%)
Query: 331 TLTYNYVLGVLCKN-GQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFF 389
T ++N VL C G +A + EM R H D ++Y I + G F +
Sbjct: 268 TKSFNIVLNGWCNVIGSPREADRIWREMCKRRIHYDVVSYASIISCYSKAGNLYKVFKLY 327
Query: 390 NQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKN 449
NQM + G++P + + I +A + +K + + + Y+ L +
Sbjct: 328 NQMKEVGIEPDRKIYNSVIFALAKGRHVSEAINLMKTMEEKGIAPNTVTYNSLIKPLCRA 387
Query: 450 NNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
A+ + EM+++G P + Y + L T +
Sbjct: 388 RKIDEARGLFDEMLQHGHSPTIRTYHAFFRSLRTGEE 424
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
LL MR++GC P TY ++ C+ Q D +L ++ PD +Y + I
Sbjct: 428 LLENMRKLGCHPTIDTYIMLIRKFCRWRQFDDVFKLWNQISENGLGPDRSSYIVLIHGLF 487
Query: 378 RVGKFDVAFNFFNQMVKRGLQP 399
GK + A+ F+ M ++ L P
Sbjct: 488 LNGKLEEAYKFYADMKEKQLLP 509
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 90/183 (49%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+++ +C+ + + +LL +M G P +TY ++ +NG+ E+ EML
Sbjct: 517 YNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEML 576
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P +TY + I G+ + AF +F++M ++G+ P + T+ + I G R +
Sbjct: 577 SKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMD 636
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
AY + +K + Y++L + + N A ++ +M+ G++P+ + +L
Sbjct: 637 QAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALL 696
Query: 479 KHL 481
K L
Sbjct: 697 KQL 699
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 1/187 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI CR + L E+R + P +TYN +L LC+ G+ A +L
Sbjct: 374 VVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKV 433
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM+ PD +TY I + SC++G +A FF++M+ GL+ +A I G
Sbjct: 434 EMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLG 493
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
A+ K ++Y+++ K N A +L +M+ +G+ P+ Y
Sbjct: 494 DTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYT 553
Query: 476 RVLKHLH 482
++ H H
Sbjct: 554 SII-HAH 559
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 65/139 (46%), Gaps = 3/139 (2%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
M ++ IK T + YN L+ C+ + DLL EM++ GC P +TYN ++ L K
Sbjct: 225 MGEFGIKPT---IVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSK 281
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
G+ A L+ EML A TY I G A + +MV +G P +AT
Sbjct: 282 KGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVAT 341
Query: 404 HAAFIKGYFIFYRYEDAYK 422
+ +FI G R DA +
Sbjct: 342 YNSFIYGLCKLGRMSDAMQ 360
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 69/150 (46%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
EM G P + YN V+ LCK G +A ELL++M+ PD +TY I G
Sbjct: 504 EMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENG 563
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+ F +M+ +GL P + T+ I G+ R E A+ Y +K + + Y+
Sbjct: 564 RLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYN 623
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
L + K A N +EM++ G+ PN
Sbjct: 624 SLINGLCKVRRMDQAYNFFAEMVEKGIFPN 653
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 82/218 (37%), Gaps = 35/218 (16%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE------ 352
YN L+ +CR+ + + + L VEM G P +TY ++ CK G + A E
Sbjct: 412 YNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEML 471
Query: 353 -----------------------------LLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
L EEML + PD I Y + + C++G +
Sbjct: 472 HEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLE 531
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
A +MV G+ P T+ + I + R + K + S + Y++L
Sbjct: 532 EASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLI 591
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
H A SEM + G+ PNV Y ++ L
Sbjct: 592 HGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGL 629
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 100/256 (39%), Gaps = 52/256 (20%)
Query: 272 LIEMFSVLGLYEMAKYVIK---KTERKVS--YYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI S G +E AK +I KT KVS YN LI + L EM G
Sbjct: 275 LINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKG 334
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITY--------------EIF 372
P TYN + LCK G+ +DA + L +ML N PD ++Y + F
Sbjct: 335 ASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAF 394
Query: 373 IVYS---------------------CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG- 410
+++ CR G+ +VA +M+ G+ P + T+ + G
Sbjct: 395 LLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGS 454
Query: 411 -----YFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKN 465
+ + D + L D Y ++ ++ L K + A ++ EM+
Sbjct: 455 CKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGEL------KLGDTSRAFSLQEEMLAK 508
Query: 466 GLRPNVSVYRRVLKHL 481
G P++ +Y V+ L
Sbjct: 509 GFPPDLIIYNVVVDGL 524
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 91/197 (46%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E + YN L +CR + LL M ++G P +TY ++ + CK+G +A
Sbjct: 384 ELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARR 443
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
L EM + P +TY + I + G A F +M K+G P + T+A+ + G+
Sbjct: 444 LFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHC 503
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
+ + + A K + + + Y+ L S K A + +M+K GL P+ S
Sbjct: 504 VNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDS 563
Query: 473 VYRRVLKHLHTSHQEHM 489
+Y ++ LHT +++ +
Sbjct: 564 LYSALVGSLHTDNRKDV 580
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 120/288 (41%), Gaps = 18/288 (6%)
Query: 198 CSLVIDN---CGRLDDYETMRQLLNDFNVYQVCLNEKAFG-FLPVLISSKALTKKGIWRV 253
S+V+D GR+DD R+LL+D + V LN + L + K + + +
Sbjct: 180 ASVVVDGLCKSGRVDD---ARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGR--VQEI 234
Query: 254 VEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-------VSYYNILIKEM 306
+E++ G V L++ S +++K E K V Y +I
Sbjct: 235 LEIMENEGIEATVGTYTILVDSLSTA--RDISKVEALFNEMKANNVVGDVYLYTAVINAY 292
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
CR + + +L E G EP TY ++ CK GQ A LL +M G+ +
Sbjct: 293 CRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQ 352
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
I + I CR G D A M K G++ + T+ G R ++A + +
Sbjct: 353 IIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHI 412
Query: 427 SADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + + Y+ L S+H K+ + V A+ + EM + G P+V Y
Sbjct: 413 MIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTY 460
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 99/249 (39%), Gaps = 8/249 (3%)
Query: 250 IWRVVEVLNQVGGSCLVSGVRA---LIEMFSVLGLYEMAKYVIKKTERKVS-----YYNI 301
+ R +VL++ G+ + R LI F +G E A+ ++ + + +N
Sbjct: 298 MRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNT 357
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
+I CR+ + M ++G E TYN + LC+ + +A LL M+
Sbjct: 358 MIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMG 417
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
P+ +TY I C+ G A F +M ++G P + T+ I GY +A
Sbjct: 418 VVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAE 477
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
++ K Y+ L H N +A + EM + G PNV Y ++ L
Sbjct: 478 RFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGL 537
Query: 482 HTSHQEHMA 490
+ A
Sbjct: 538 AKEGRSEAA 546
>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
macrostachya]
Length = 414
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 86/183 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ +L EM G P +T+ ++ CK+G+ A E+ +
Sbjct: 195 VYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVDLAMEIYK 254
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G A + ++M +GL+P T+ I G
Sbjct: 255 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEG 314
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A+++ + ++ Y+ L S + + A+ VL EM+ GL+P+ Y
Sbjct: 315 DLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSAGLKPDTGTYT 374
Query: 476 RVL 478
++
Sbjct: 375 MII 377
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 55/115 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +N L+ R D L M G +P TY+ ++ LCK + DA EL +
Sbjct: 160 VVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFD 219
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
EML + P+ +T+ I C+ G+ D+A + QM+ + L P L T+ I G
Sbjct: 220 EMLDKGLVPNGVTFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 274
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 77/181 (42%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ C+ D + + + + + G P +++N ++ + G + L M
Sbjct: 127 FFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAM 186
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
PD TY + I C+ K D A F++M+ +GL P T I G+ R
Sbjct: 187 HASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGRV 246
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ A + + S + Y+ L K + A +++ EM GL+P+ Y +
Sbjct: 247 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTL 306
Query: 478 L 478
+
Sbjct: 307 I 307
>gi|255660782|gb|ACU25560.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 418
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 86/186 (46%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
+ V Y++LI +C+ +L EM G P +T+ ++ CKN + A E
Sbjct: 203 QSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNRRVDVAME 262
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+ ++ML ++ PD ITY I C+ G A + ++M +GL+P T+ I G
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNC 322
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
E A++Y + ++ Y+ L S + V A+ +L EM+ GL+P +
Sbjct: 323 KEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 473 VYRRVL 478
Y ++
Sbjct: 383 TYTMII 388
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +N L+ + D L M+ G + TY+ ++ LCK + DA EL +
Sbjct: 171 VVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQSDVYTYSVLINGLCKASKMDDANELFD 230
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
EML P+ +T+ I C+ + DVA + QM+ + L P L T+ I G
Sbjct: 231 EMLDNGLVPNGVTFTTLIDGHCKNRRVDVAMEIYKQMLSQSLSPDLITYNTLIYG 285
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 74/181 (40%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ + + + + + + + P +++N ++ K G + L M
Sbjct: 138 FFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
D TY + I C+ K D A F++M+ GL P T I G+ R
Sbjct: 198 QASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNRRV 257
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ A + + S + Y+ L K + A++++ EM GL+P+ Y +
Sbjct: 258 DVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTL 317
Query: 478 L 478
+
Sbjct: 318 I 318
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 81/176 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+LI + + +L EM+ GC P T TYN ++ K+G+ + +L +EML
Sbjct: 793 YNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEML 852
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R C P+ ITY + I + + D A + + +V P T I G R +
Sbjct: 853 TRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLD 912
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
DA++ ++ +Y++L + + K + A M+K G+RP++ Y
Sbjct: 913 DAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSY 968
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 82/183 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN++I + + DL + P T+ ++ L K+G+ DA E+ + M+
Sbjct: 863 YNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMV 922
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C P++ Y I + ++G D A FF +MVK G++P L ++ + I R +
Sbjct: 923 HYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVD 982
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA Y + Y+L+ + ++ A ++ EM G+ P++ Y ++
Sbjct: 983 DALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLI 1042
Query: 479 KHL 481
+L
Sbjct: 1043 LNL 1045
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 2/196 (1%)
Query: 308 RRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAI 367
+R + K LL EM +G P TY + VL ++G+ +A +++ M C PD +
Sbjct: 241 KRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVV 300
Query: 368 TYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK-YVVL 426
TY + I C K D A F +M +P T+ + + + K + +
Sbjct: 301 TYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEM 360
Query: 427 SADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
AD Y + + +++L + K A ++L M K G+ PN+ Y ++ L +++
Sbjct: 361 EADGY-APDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANR 419
Query: 487 EHMAKCLSSRYSSLSL 502
A L S SL +
Sbjct: 420 LDDALDLFSNMESLGV 435
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 80/198 (40%), Gaps = 12/198 (6%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ LI + + ++ M GC P + YN ++ K G ACE + M+
Sbjct: 898 FGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMV 957
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD +Y I + C G+ D A ++F ++ + GL P L + I G R E
Sbjct: 958 KEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTE 1017
Query: 419 DAYKYV------VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
+A + D Y +S +L + + ++ A + E+ GL+PNV
Sbjct: 1018 EALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEE------AGKIYEELQFIGLKPNVF 1071
Query: 473 VYRRVLKHLHTSHQEHMA 490
Y +++ S +A
Sbjct: 1072 TYNALIRGYTLSGNSELA 1089
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 1/127 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YNIL+ + + + L M GC P T+T+N +L LCKN + A ++
Sbjct: 579 VVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFY 638
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M NC PD +T+ I + + A F+QM K+ L+P T + G
Sbjct: 639 KMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQM-KKLLRPDHVTLCTLLPGVIKSG 697
Query: 416 RYEDAYK 422
+ EDA++
Sbjct: 698 QIEDAFR 704
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 97/241 (40%), Gaps = 5/241 (2%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
L++ FS G + + + + E V + IL+ +C+ DLL MR+
Sbjct: 339 TLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQ 398
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P TYN ++ L + + DA +L M P A TY + I Y + G A
Sbjct: 399 GVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKA 458
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
F +M RG+ P + A + R +A + ++ Y+++
Sbjct: 459 LETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKC 518
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSS 505
+ K A +LSEM K P+V V ++ L+ + + A + R ++L +
Sbjct: 519 YSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPT 578
Query: 506 V 506
V
Sbjct: 579 V 579
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 3/131 (2%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L EM+K + E V N LI + + + + M ++ P +TYN +L
Sbjct: 532 LSEMSKV---QCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAG 588
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
L K GQ A +L E M G C P+ IT+ + C+ + D+A F +M +P
Sbjct: 589 LGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPD 648
Query: 401 LATHAAFIKGY 411
+ T I G+
Sbjct: 649 VLTFNTIIHGF 659
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 1/140 (0%)
Query: 283 EMAKYVIKKTER-KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
E K ++K+ R + Y IL+ +C +++Q G +P + YN ++ L
Sbjct: 951 EFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGL 1010
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
++ + +A L EM R PD TY I+ VG + A + ++ GL+P +
Sbjct: 1011 GRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNV 1070
Query: 402 ATHAAFIKGYFIFYRYEDAY 421
T+ A I+GY + E AY
Sbjct: 1071 FTYNALIRGYTLSGNSELAY 1090
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 77/182 (42%), Gaps = 2/182 (1%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
+ YNIL+ + + M + G P +Y ++ +LC G+ DA E+
Sbjct: 931 AIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEK 990
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
+ PD + Y + I R + + A + F++M RG+ P L T+ + I I
Sbjct: 991 LKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGM 1050
Query: 417 YEDAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E+A K Y L K + Y+ L + + N +A + +MM G PN +
Sbjct: 1051 IEEAGKIYEELQFIGLKPNV-FTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFA 1109
Query: 476 RV 477
++
Sbjct: 1110 QL 1111
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 77/189 (40%), Gaps = 2/189 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI + R DL M +G EP TY ++ K+G A E E+M
Sbjct: 407 YNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMK 466
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R P+ + + +G+ A FN++ GL P T+ +K Y + +
Sbjct: 467 ARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVD 526
Query: 419 DAYKYVV-LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+A K + +S + + ++ SL+ +L+ K A + M + L P V Y +
Sbjct: 527 EAIKLLSEMSKVQCEPDVIVINSLIDTLY-KAGRVEEAWQMFCRMEEMNLAPTVVTYNIL 585
Query: 478 LKHLHTSHQ 486
L L Q
Sbjct: 586 LAGLGKEGQ 594
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 65/165 (39%), Gaps = 3/165 (1%)
Query: 324 QVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN-CHPDAITYEIFIVYSCRVGKF 382
QVG + V+G + A E ++ R C D++ I V C+ K
Sbjct: 712 QVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVL-CKHKKT 770
Query: 383 DVAFNFFNQMVKR-GLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
VA N F + K G++P L + I G+ + E A+ + Y+
Sbjct: 771 SVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNS 830
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
L H K+ ++ EM+ G +PN Y V+ +L S++
Sbjct: 831 LIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNR 875
>gi|255660838|gb|ACU25588.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 418
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 82/183 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ +L EM G P +T+ ++ CK G A E +
Sbjct: 206 VYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMEAYK 265
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EML + PD ITY I C+ G A + ++M +GL+P T+ I G
Sbjct: 266 EMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEG 325
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A+KY + ++ Y+ L S + V A+ +L EM+ GL+P+ Y
Sbjct: 326 DLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLREMLSVGLKPDNGTYT 385
Query: 476 RVL 478
++
Sbjct: 386 MII 388
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 8/162 (4%)
Query: 255 EVLNQVGGSCLV-SGVR--ALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEM 306
E+ +++ G+ LV +GV LI+ G ++A K+ R+ + YN LI +
Sbjct: 227 ELFDEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGL 286
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
C+ D K +DL+ EM G +P +TY ++ CK G A + + M+ N D
Sbjct: 287 CKEGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDD 346
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
+ Y I CR G+ A +M+ GL+P T+ I
Sbjct: 347 VAYTALISGLCREGQSVGAEKMLREMLSVGLKPDNGTYTMII 388
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/145 (20%), Positives = 60/145 (41%)
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
+N ++ CK G+ A + +E+ P +++ + R+G D F + M
Sbjct: 139 FNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMH 198
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPV 453
G+QP + T++ I G + DA + + + ++ L H K +
Sbjct: 199 GSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDGHCKTGSID 258
Query: 454 MAKNVLSEMMKNGLRPNVSVYRRVL 478
+A EM++ G P++ Y ++
Sbjct: 259 LAMEAYKEMLRQGFSPDLITYNTLI 283
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI +CR G +L EM VG +P TY ++ CK G +LL+EM
Sbjct: 349 YTALISGLCREGQSVGAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKMGSKLLKEM- 407
Query: 359 GRNCH 363
R+ H
Sbjct: 408 QRDGH 412
>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 8/210 (3%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
Y M + +K T V YN ++ + F+ + M++ G EP TYN +L
Sbjct: 134 FYRMQDFRVKPT---VKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKA 190
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
LCKN + A +LL EM + C PD ++Y I C++GK A + + P
Sbjct: 191 LCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA-----RELAMSFTPS 245
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
+ + A I G Y +E+A++ + +K + + Y+ + + N ++ VL+
Sbjct: 246 VPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLA 305
Query: 461 EMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
+M G PN+ + ++K H A
Sbjct: 306 KMFARGCSPNLHTFTSLIKGFFLKGGSHEA 335
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 57/129 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ LI + D G ++ M GC P + Y ++ VLC+N A L+E
Sbjct: 386 VRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIE 445
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M NC P+ +T+ FI C G+ D A F+QM G P T+ +
Sbjct: 446 NMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDR 505
Query: 416 RYEDAYKYV 424
R+ +A+ V
Sbjct: 506 RFGEAFGLV 514
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 129/324 (39%), Gaps = 52/324 (16%)
Query: 234 GFLPVLISSKAL-----TKKGIWRVVEVLNQ--VGGSCL-VSGVRALIEMFS----VLGL 281
G +P +++ AL +K+ + V V NQ + G C V ALI+ ++ + G
Sbjct: 346 GVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGA 405
Query: 282 YEMAKYVIKKT-ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
E+ ++I V Y ++ +CR F L+ M+ C P T+T+N +
Sbjct: 406 SEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKG 465
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
LC +G+ A ++ ++M C P+ TY + + +F AF M RG++
Sbjct: 466 LCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELN 525
Query: 401 LATHAAFIKGYFIFYRYEDAYKY-----------------VVLSADKYKSSSNMLYSLLA 443
L T+ I GY +A + +V+ A + N+ L+
Sbjct: 526 LVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMD 585
Query: 444 SLHDKNNNPVM------------------AKNVLSEMMKNGLRPNVSVYRRVLKHLHTSH 485
L +P + A L M+ G+ PNV+ + +++HL +
Sbjct: 586 RLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFS-- 643
Query: 486 QEHMAKCLSSRYSSLSLGSSVEAR 509
+M + ++ LGS E R
Sbjct: 644 --NMGHSGAVQFLDAVLGSGFETR 665
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 90/223 (40%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPI 330
LI LG + A+ + V YN LI +C+ F+ LL EM G +P
Sbjct: 221 TLISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPN 280
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN 390
++Y ++ L G + +L +M R C P+ T+ I G A +F++
Sbjct: 281 VISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWD 340
Query: 391 QMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNN 450
+M++ G+ P + + A + G DA + YS L + K
Sbjct: 341 RMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAG 400
Query: 451 NPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
+ A V + M+ +G PNV Y ++ L + + A CL
Sbjct: 401 DLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCL 443
>gi|238480176|ref|NP_001154199.1| uncharacterized protein [Arabidopsis thaliana]
gi|223635643|sp|Q8LDU5.2|PP298_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g01400, mitochondrial; Flags: Precursor
gi|332656621|gb|AEE82021.1| uncharacterized protein [Arabidopsis thaliana]
Length = 466
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ +CR+ + LL M+ GC P + YN ++ C+ + DA ++L++ML
Sbjct: 263 YTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDML 322
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C P++++Y I C G FD + +M+ +G P + +KG+ F + E
Sbjct: 323 SNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVE 382
Query: 419 DA 420
+A
Sbjct: 383 EA 384
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 75/165 (45%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
+L R G P T +YN ++ C N + A +L +ML R+ PD +Y+I I
Sbjct: 176 ELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGF 235
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
CR G+ + A + M+ +G P ++ + + +AYK + K +
Sbjct: 236 CRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDL 295
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ Y+ + + + + A+ VL +M+ NG PN YR ++ L
Sbjct: 296 VHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGL 340
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 2/176 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+L++ C D L +M + P +Y ++ C+ GQ A ELL++ML
Sbjct: 193 YNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDML 252
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD ++Y + CR + A+ +M +G P L + I G+ R
Sbjct: 253 NKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAM 312
Query: 419 DAYKYVVLSADKYKSSSNMLY-SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
DA K + S +++ Y +L+ L D+ K L EM+ G P+ SV
Sbjct: 313 DARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFD-EGKKYLEEMISKGFSPHFSV 367
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
+YN +I CR R +L +M GC P +++Y ++G LC G + + LEEM
Sbjct: 297 HYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEM 356
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
+ + P + C GK + A + ++K G
Sbjct: 357 ISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 395
>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 79/183 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ L+ +C LL EM+ G P + +N ++ LCK G + A +L++ M
Sbjct: 213 YSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMF 272
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C P+ +TY + C GK D A + N+MV P T + G+ R
Sbjct: 273 LKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRAL 332
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
D + +V +K + YS L S K + EM++ G +PN VY ++
Sbjct: 333 DGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALI 392
Query: 479 KHL 481
L
Sbjct: 393 DGL 395
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 78/164 (47%), Gaps = 6/164 (3%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
+LV + + G +Y+ ++ L K G+ +L +EM+ + C P+ I Y I C
Sbjct: 337 VLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLC 396
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN- 436
R GK D A + +M +G P T+++ + GYF D +K +++ + + N
Sbjct: 397 REGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYF---EAGDIHKAILVWKEMTDNDCNH 453
Query: 437 --MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ YS+L + KN A V +M+ G++ +V Y ++
Sbjct: 454 HEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMI 497
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 94/215 (43%), Gaps = 4/215 (1%)
Query: 258 NQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRD 317
N+ S L+SG+ E G+ + V K + Y+ LI +CR ++
Sbjct: 349 NEFSYSSLISGL--FKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKE 406
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L+EM+ G P + TY+ ++ + G A + +EM +C+ + Y I I C
Sbjct: 407 YLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLC 466
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV--VLSADKYKSSS 435
+ GK A + QM+ RG++ + +++ I G+ E K +L +
Sbjct: 467 KNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPD 526
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
+ Y++L + N+ A ++L+ M+ G P+
Sbjct: 527 VVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPD 561
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 70/185 (37%), Gaps = 16/185 (8%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ILI +C+ K + +M G + + Y+ ++ C +L +ML
Sbjct: 458 YSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQML 517
Query: 359 GRN--CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
N PD +TY I + C A + N M+ +G P T F+K
Sbjct: 518 CHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLK------T 571
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
D + D + L L+ L K V A N++ M++ L P S +
Sbjct: 572 LRD-------NMDPPQDGREFLDELVVRL-IKRQRTVGASNIIEVMLQKFLLPKPSTWAL 623
Query: 477 VLKHL 481
++ L
Sbjct: 624 AVQQL 628
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 104/230 (45%), Gaps = 8/230 (3%)
Query: 274 EMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQ-VGCEPITL 332
++ L +E + + ER YN+++ +C+ ++L EMR P +
Sbjct: 22 QLKQALACFEKMREFVAPNERT---YNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLV 78
Query: 333 TYNYVLGVLCKNGQDADACELLEEMLGRN-CHPDAITYEIFIVYSCRVGKFDVAFNFFNQ 391
TY+ V+ CK G+ ACE+L EM+ R+ PD +TY + CR GK D A +
Sbjct: 79 TYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVRE 138
Query: 392 MVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV--VLSADKYKSSSNMLYSLLASLHDKN 449
M +G++P T +A I G+ + ++A K +L++ +K + Y+ L K+
Sbjct: 139 MKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDV-VTYTALIDGFCKS 197
Query: 450 NNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSS 499
N A +L M PNV Y +L L + A L R +S
Sbjct: 198 GNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTS 247
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 110/248 (44%), Gaps = 18/248 (7%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI+ F G E A ++ E + V Y+ L+ +C+ D DL M
Sbjct: 189 ALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSK 248
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
GC P +TY ++ LC + A L++EM C PD ++Y + CR+G+ + A
Sbjct: 249 GCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEA 308
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM-----LYS 440
F +M + P T+ ++G+ R E+A ++++ + K+++ + YS
Sbjct: 309 KQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEA-RFLL---ENMKTAAGIDPDVVTYS 364
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL----HTSHQEHMAKCLSSR 496
++ + + + V A + EM+ + PN Y ++ L H + K + ++
Sbjct: 365 IVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNK 424
Query: 497 YSSLSLGS 504
S+G+
Sbjct: 425 RVEPSVGT 432
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 90/203 (44%), Gaps = 2/203 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEM-RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
Y+ +I C++ + ++L EM + G P +TY V+ LC++G+ ACE++ EM
Sbjct: 80 YSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREM 139
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK-RGLQPRLATHAAFIKGYFIFYR 416
+ PD T+ I C K D A + +++ +P + T+ A I G+
Sbjct: 140 KLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGN 199
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
E A K + + + + + YS L K + A ++ M G PNV Y
Sbjct: 200 LEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTT 259
Query: 477 VLKHLHTSHQEHMAKCLSSRYSS 499
++ L +H+ A+ L ++
Sbjct: 260 LIHGLCAAHKVDAARLLMDEMTA 282
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 81/178 (45%), Gaps = 6/178 (3%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERKVSY-----YNILIKEMCRRCDFKGPRDLLVEMRQV 325
AL++ + LG E AK + K+ K Y L++ C + R LL M+
Sbjct: 294 ALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTA 353
Query: 326 -GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
G +P +TY+ V+ + + +A E ++EM+ RN P+A+TY I C+ G+ D
Sbjct: 354 AGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDH 413
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
A MV + ++P + T + I ++A+K +V A + Y+ L
Sbjct: 414 AMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTL 471
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 60/127 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+I++ R F + + EM P +TY+ ++ LCK G+ A E+L+
Sbjct: 360 VVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLK 419
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+ + P T+ I CR+G D A+ M GL+P + T+ ++G+
Sbjct: 420 NMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTG 479
Query: 416 RYEDAYK 422
R E AY+
Sbjct: 480 RMEIAYE 486
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 74/184 (40%), Gaps = 1/184 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y LI C+ + + +L M C P +TY+ +L LCK G A +L
Sbjct: 184 VVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFR 243
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M + C P+ +TY I C K D A ++M P ++ A + GY
Sbjct: 244 RMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLG 303
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM-MKNGLRPNVSVY 474
R E+A + A K + Y+ L + A+ +L M G+ P+V Y
Sbjct: 304 RIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTY 363
Query: 475 RRVL 478
V+
Sbjct: 364 SIVV 367
>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19440, chloroplastic; Flags: Precursor
Length = 838
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 100/224 (44%), Gaps = 20/224 (8%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
LI +C+ +L + G T T N +L LC+ G+ +A + +E+LGR
Sbjct: 489 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 548
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
C D ++Y I C K D AF F ++MVKRGL+P T++ I G F + E+A
Sbjct: 549 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAI 608
Query: 422 KYVVLSADKYKSSSNM----LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
++ D K + + YS++ K + EMM ++PN VY +
Sbjct: 609 QF----WDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 664
Query: 478 LKHLHTSHQEHMAKCL------------SSRYSSLSLGSSVEAR 509
++ S + MA L S+ Y+SL G S+ +R
Sbjct: 665 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 708
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 85/183 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+++I C+ + ++ EM +P T+ YN+++ C++G+ + A EL E
Sbjct: 623 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 682
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M + P++ TY I + + + A F +M GL+P + + A I GY
Sbjct: 683 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 742
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ + K + + Y+++ + ++ N A +L+EM + G+ P+ Y+
Sbjct: 743 QMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYK 802
Query: 476 RVL 478
+
Sbjct: 803 EFI 805
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 51/114 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LIK M + + L EMR G EP Y ++ K GQ LL EM
Sbjct: 696 YTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMH 755
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+N HP+ ITY + I R G A N+M ++G+ P T+ FI GY
Sbjct: 756 SKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYL 809
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 83/194 (42%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N L+ +C + E+ GC ++YN ++ C + +A L+EM+
Sbjct: 522 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 581
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
R PD TY I I + K + A F++ + G+ P + T++ I G R E+
Sbjct: 582 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 641
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
++ K + ++Y+ L + ++ MA + +M G+ PN + Y ++K
Sbjct: 642 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 701
Query: 480 HLHTSHQEHMAKCL 493
+ + AK L
Sbjct: 702 GMSIISRVEEAKLL 715
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 126/332 (37%), Gaps = 29/332 (8%)
Query: 152 LSMSVSLSNASVIEILRVLNSEKVSALCFLKYMREIMPEFYKNSDICSLVIDNCGRLDDY 211
L + +L +A+ + ++R++N C L+ R + + + +C D
Sbjct: 148 LLLDANLLSAARVVLIRLINGNVPVLPCGLRDSRVAIADAMASLSLC---------FD-- 196
Query: 212 ETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRA 271
E +R+ ++D + C K G L L KG++ N + L S VRA
Sbjct: 197 EEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNIL----LTSLVRA 252
Query: 272 -----LIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
E F V V K V + I C+ + L +M + G
Sbjct: 253 NEFQKCCEAFDV---------VCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAG 303
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
P +T+N V+ L G+ +A E+M+ R P ITY I + R + A+
Sbjct: 304 VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAY 363
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
+M K+G P + + I + A + L K S ++ Y+ L +
Sbjct: 364 FVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGY 423
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
KN A+ +L EM+ G N + V+
Sbjct: 424 CKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 455
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 77/195 (39%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI C + L EM + G +P TY+ ++ L + +A + ++
Sbjct: 556 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK 615
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD TY + I C+ + + FF++M+ + +QP + I+ Y R
Sbjct: 616 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 675
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + K S ++ Y+ L + AK + EM GL PNV Y ++
Sbjct: 676 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 735
Query: 479 KHLHTSHQEHMAKCL 493
Q +CL
Sbjct: 736 DGYGKLGQMVKVECL 750
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 90/233 (38%), Gaps = 9/233 (3%)
Query: 243 KALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKT-ERKVSYYNI 301
K +TKKG V V N + + + IE S+ E+ ++ K S YN
Sbjct: 367 KEMTKKGFPPNVIVYNNL--------IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 418
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
LIK C+ LL EM +G ++ V+ +LC + A + EML RN
Sbjct: 419 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 478
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
P I C+ GK A + Q + +G T A + G + ++A+
Sbjct: 479 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 538
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + + Y+ L S A L EM+K GL+P+ Y
Sbjct: 539 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 591
Score = 38.5 bits (88), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 70/194 (36%), Gaps = 40/194 (20%)
Query: 257 LNQVGGSCLVSGVRALIEMFSVLGLYEMA-----KYVIKKTERKVSYYNILIKEMCRRCD 311
+ + G + V +I+ + G Y+ A K V + E + Y+IL+K + R
Sbjct: 299 MEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKR 358
Query: 312 FKGPRDLLVEMRQVGCEPITL-----------------------------------TYNY 336
+L EM + G P + TYN
Sbjct: 359 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 418
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
++ CKNGQ +A LL+EML + + ++ I C FD A F +M+ R
Sbjct: 419 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 478
Query: 397 LQPRLATHAAFIKG 410
+ P I G
Sbjct: 479 MSPGGGLLTTLISG 492
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 4/161 (2%)
Query: 263 SCLVSGVRALIEMFSVLGLY-EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
+CL+ G + L L+ E+ K+ I V Y+ILIK +C + LL E
Sbjct: 337 NCLIDGYCKAGNLSEALSLHSEIEKHEILP---DVFTYSILIKGLCGVDRMEEADGLLQE 393
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M++ G P +TYN ++ CK G A E+ +M + P+ IT+ I C+ GK
Sbjct: 394 MKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGK 453
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
+ A + +MV +GL P + + A I G+F ++A++
Sbjct: 454 MEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFR 494
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 77/183 (42%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V + ILI +C+ + R L++M G P YN ++ CK G ++A L
Sbjct: 298 VVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHS 357
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
E+ PD TY I I C V + + A +M K+G P T+ I GY
Sbjct: 358 EIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEG 417
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A + +K + + +S L + K A + +EM+ GL P+V Y
Sbjct: 418 NMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYT 477
Query: 476 RVL 478
++
Sbjct: 478 ALI 480
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 118/293 (40%), Gaps = 23/293 (7%)
Query: 199 SLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAF-----GFLPVLISSKALTKKGIWRV 253
++ID + D+ + R+ L D + V N + G+ S+AL+
Sbjct: 302 GILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEK 361
Query: 254 VEVLNQVGG-SCLVSGVRALIEMFSVLGLY-EMAKYVIKKTERKVSYYNILIKEMCRRCD 311
E+L V S L+ G+ + M GL EM K K YN LI C+ +
Sbjct: 362 HEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKK---KGFLPNAVTYNTLIDGYCKEGN 418
Query: 312 FKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEI 371
+ ++ +M + G EP +T++ ++ CK G+ A L EM+ + PD + Y
Sbjct: 419 MEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTA 478
Query: 372 FIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV--LSAD 429
I + G AF +M + GL P + T + I G R DA K + D
Sbjct: 479 LIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTD 538
Query: 430 KYKSSSN-----------MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
S +N ++Y+ L + A S+M +GLRP+V
Sbjct: 539 TTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDV 591
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 96/245 (39%), Gaps = 11/245 (4%)
Query: 244 ALTKKG----IWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMA-----KYVIKKTER 294
L KKG +W+V + G S V LI+ G + A + + KK
Sbjct: 167 GLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFP 226
Query: 295 KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
V Y ILI+ +C + MR G P TYN ++ CK A EL
Sbjct: 227 TVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELY 286
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
EMLG P+ +T+ I I C+ + A F M G+ P + + I GY
Sbjct: 287 XEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKA 346
Query: 415 YRYEDAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
+A + +K++ ++ YS+L + A +L EM K G PN
Sbjct: 347 GNLSEALS-LHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVT 405
Query: 474 YRRVL 478
Y ++
Sbjct: 406 YNTLI 410
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 126/322 (39%), Gaps = 78/322 (24%)
Query: 186 EIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKAL 245
EI+P+ + S L+ CG +D E LL + K GFLP ++ L
Sbjct: 363 EILPDVFTYS---ILIKGLCG-VDRMEEADGLLQEM---------KKKGFLPNAVTYNTL 409
Query: 246 T----KKG-IWRVVEVLNQ----------VGGSCLVSGVRALIEMFSVLGLYEMAKYVIK 290
K+G + + +EV +Q + S L+ G +M + +GLY + VIK
Sbjct: 410 IDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLY--TEMVIK 467
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
V Y LI + + K L EM++ G P T + ++ LCK+G+ +DA
Sbjct: 468 GLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDA 527
Query: 351 CELLEEMLGRN-------------CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
+L G + C P+ + Y I C G+ A FF+ M GL
Sbjct: 528 IKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGL 587
Query: 398 QPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKN 457
+P + T I+G+F D ++L AD
Sbjct: 588 RPDVFTCIVIIQGHFRAMHLRDV---MMLQAD---------------------------- 616
Query: 458 VLSEMMKNGLRPNVSVYRRVLK 479
++K G+ PN SVYR + K
Sbjct: 617 ----ILKMGIIPNSSVYRVLAK 634
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 80/176 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI+ + + +L EM+ GC P TYN +L K+G+ + EL E+M+
Sbjct: 793 YNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMI 852
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+C P+ IT+ I I + D A + F +V P T+ + G R E
Sbjct: 853 CSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLE 912
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+A + D +N +Y++L + K + A + M++ G+RP++ Y
Sbjct: 913 EAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSY 968
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 6/199 (3%)
Query: 286 KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNG 345
+ V++ + + ++ L+ +R D + + LL EM +G +P TY + VL + G
Sbjct: 219 RMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAG 278
Query: 346 QDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
+ +AC +++ M C PD +TY + I C GK D A F +M +P T+
Sbjct: 279 RIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYI 338
Query: 406 AFIKGY---FIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM 462
+ + R ++ + + AD Y + + +++L + K N A ++L M
Sbjct: 339 TMLDKFSDCGDLGRVKEFWSE--MEADGY-APDVITFTILVNALCKAGNIDEAFHLLDVM 395
Query: 463 MKNGLRPNVSVYRRVLKHL 481
K G+ PN+ Y ++ L
Sbjct: 396 RKQGVLPNLHTYNTLISGL 414
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 88/235 (37%), Gaps = 5/235 (2%)
Query: 273 IEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGC 327
I + G + A ++K+ E V Y +LI +C +L V+M+
Sbjct: 271 IRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSH 330
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
+P +TY +L G E EM PD IT+ I + C+ G D AF+
Sbjct: 331 KPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFH 390
Query: 388 FFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHD 447
+ M K+G+ P L T+ I G R +DA + Y L +
Sbjct: 391 LLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYG 450
Query: 448 KNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSL 502
K+ A +M G+ PN+ L L + AK + +R S L
Sbjct: 451 KSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGL 505
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 92/212 (43%), Gaps = 8/212 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+NI+I + + DL ++ P TY +L L K+G+ +A EL EEM+
Sbjct: 863 HNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMV 922
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C P+ Y I I + G + A F +MV+ G++P L ++ + + R +
Sbjct: 923 DYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVD 982
Query: 419 DAYKYVVLSADKYKSSS----NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
DA Y +K K + ++ Y+L+ +++ A + EM G+ P++ Y
Sbjct: 983 DALHYF----EKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTY 1038
Query: 475 RRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
++ +L + A L + L +V
Sbjct: 1039 NSLILNLGVAGMVEQAGKLYEELQFIGLEPNV 1070
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 58/127 (45%), Gaps = 1/127 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI + + + +L M GC P T+T+N +L LCKN + A ++L
Sbjct: 579 VVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLY 638
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M NC PD +T+ I + A F+QM K+ L P T + G
Sbjct: 639 KMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQM-KKMLTPDCVTLCTLLPGVVKNG 697
Query: 416 RYEDAYK 422
EDA+K
Sbjct: 698 LMEDAFK 704
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 89/211 (42%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V + IL+ +C+ + LL MR+ G P TYN ++ L + + DA +L
Sbjct: 369 VITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFN 428
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M P A TY +FI + + G+ D A F +M RG+ P + A +
Sbjct: 429 NMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMG 488
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R +A + ++ Y+++ + K A +LS+M +N P++ V
Sbjct: 489 RLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVIN 548
Query: 476 RVLKHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
++ L+ + + A + R + L +V
Sbjct: 549 SLINTLYKAGRVDEAWKMFCRLKDMKLAPTV 579
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 51/128 (39%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E + N LI + + + ++ + P +TYN ++ L K GQ A E
Sbjct: 541 EPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAME 600
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
L M G C P+ IT+ + C+ + D+A +M P + T I G
Sbjct: 601 LFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLV 660
Query: 413 IFYRYEDA 420
I R DA
Sbjct: 661 IEKRVSDA 668
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 64/154 (41%), Gaps = 4/154 (2%)
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
+++G +P +YN+++ D A L EM C PD TY + + + GK
Sbjct: 782 KELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKI 841
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK--YVVLSADKYKSSSNMLYS 440
+ F + QM+ +P TH I + A Y ++S D S + Y
Sbjct: 842 NELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGD--FSPTPCTYG 899
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
L K+ AK + EM+ G RPN ++Y
Sbjct: 900 PLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIY 933
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
++ G P ++TYN ++ K GQ +A ELL +M C PD I I + G+
Sbjct: 500 LKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGR 559
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
D A+ F ++ L P + T+ I G
Sbjct: 560 VDEAWKMFCRLKDMKLAPTVVTYNTLIAG 588
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 65/140 (46%), Gaps = 1/140 (0%)
Query: 283 EMAKYVIKKTER-KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
E+ K ++++ R + Y L+ +C +++Q G ++ YN ++ L
Sbjct: 951 ELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGL 1010
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
++ + +A L +EM R +PD TY I+ G + A + ++ GL+P +
Sbjct: 1011 GRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNV 1070
Query: 402 ATHAAFIKGYFIFYRYEDAY 421
T+ A I+GY + + AY
Sbjct: 1071 FTYNALIRGYSMSGNSDSAY 1090
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 80/227 (35%), Gaps = 35/227 (15%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM- 357
YN LI + R DL M +G P TY + K+G+ A E E+M
Sbjct: 407 YNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMK 466
Query: 358 --------------------LGR--------------NCHPDAITYEIFIVYSCRVGKFD 383
+GR PD++TY + + + G+ D
Sbjct: 467 IRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVD 526
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
A + M + +P + + I + R ++A+K D + + + Y+ L
Sbjct: 527 EAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLI 586
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
+ K A + + M NG PN + +L L + + +A
Sbjct: 587 AGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLA 633
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 44/107 (41%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN++I + R + L EM+ G P TYN ++ L G A +L EE+
Sbjct: 1003 YNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQ 1062
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
P+ TY I G D A+ + +M+ G P T A
Sbjct: 1063 FIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFA 1109
>gi|225464138|ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
[Vitis vinifera]
gi|296087974|emb|CBI35257.3| unnamed protein product [Vitis vinifera]
Length = 503
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 1/184 (0%)
Query: 296 VSYYNILIKEMCRRCD-FKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
V+ N+LIK +C+ + EM GC P + TY ++ LC+ G+ +A EL
Sbjct: 155 VASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELF 214
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
+EM + C P +TY I C+ D A +M +G++P + T+++ + G+
Sbjct: 215 KEMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKS 274
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
A + + + + + + YS L K A +L M GLRP+ +Y
Sbjct: 275 GCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLY 334
Query: 475 RRVL 478
+++
Sbjct: 335 GKII 338
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 82/182 (45%), Gaps = 5/182 (2%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
LI LG AK + K+ E K V Y LI +C+ D LL EM
Sbjct: 196 TLINGLCRLGKIGEAKELFKEMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASK 255
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G +P TY+ ++ CK+G + A ELL+ M+ R P+ ITY + C+ GK A
Sbjct: 256 GIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEA 315
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
++M +GL+P + I G+ ++ +A ++ S + + +SL +
Sbjct: 316 VEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRI 375
Query: 446 HD 447
H+
Sbjct: 376 HN 377
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 69/161 (42%), Gaps = 1/161 (0%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADAC-ELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
MR++G P + N ++ LCKN DA + EM R C PD+ TY I CR+G
Sbjct: 146 MREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPDSYTYGTLINGLCRLG 205
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
K A F +M + P + T+ + I G + A + + A K + YS
Sbjct: 206 KIGEAKELFKEMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYS 265
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
L H K+ A +L M+ PN+ Y ++ L
Sbjct: 266 SLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGL 306
>gi|413951889|gb|AFW84538.1| hypothetical protein ZEAMMB73_463361, partial [Zea mays]
Length = 423
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 94/183 (51%), Gaps = 3/183 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNI+++ +C R D L +R+ G P +TY+ ++ L K+ Q +A +LL+EM
Sbjct: 202 YNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLVKHDQLDNALDLLDEMP 261
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR-GLQPRLATHAAFIKGYFIFYRY 417
DA+ Y + + G F+ A + Q+V+ G P LAT+ + G R+
Sbjct: 262 DYGVQADAVCYNALLSGCFKTGMFEKAIKVWEQLVRDPGASPNLATYKVMLDGLCKLGRF 321
Query: 418 EDAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
++A + + + A+ ++ + + Y +L ++ + A V S+M+K GL +V+VY
Sbjct: 322 KEAGEVWSRMVANNHQPDT-VTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVAVYNS 380
Query: 477 VLK 479
++K
Sbjct: 381 LIK 383
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 53/102 (51%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
+R G P TY +L LCK G+ +A E+ M+ N PD +TY I I CR G
Sbjct: 296 VRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMVANNHQPDTVTYGILIHGLCRSGD 355
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY 423
D A ++ MVK GL +A + + IKG+ R +A+K+
Sbjct: 356 VDSAARVYSDMVKAGLVLDVAVYNSLIKGFCKVGRTGEAWKF 397
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 64/137 (46%), Gaps = 7/137 (5%)
Query: 280 GLYEMAKYVIKKTERK------VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLT 333
G++E A V ++ R ++ Y +++ +C+ FK ++ M +P T+T
Sbjct: 283 GMFEKAIKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMVANNHQPDTVT 342
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
Y ++ LC++G A + +M+ D Y I C+VG+ A+ F++
Sbjct: 343 YGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVAVYNSLIKGFCKVGRTGEAWKFWDSTG 402
Query: 394 KRGLQPRLATHAAFIKG 410
G++ ++ T+ +KG
Sbjct: 403 FSGIR-QITTYNVMMKG 418
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 58/147 (39%), Gaps = 1/147 (0%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P TYN +L LC G A L + R PD +TY + + + D A +
Sbjct: 197 PNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLVKHDQLDNALDL 256
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSNMLYSLLASLHD 447
++M G+Q + A + G F +E A K + L D S + Y ++
Sbjct: 257 LDEMPDYGVQADAVCYNALLSGCFKTGMFEKAIKVWEQLVRDPGASPNLATYKVMLDGLC 316
Query: 448 KNNNPVMAKNVLSEMMKNGLRPNVSVY 474
K A V S M+ N +P+ Y
Sbjct: 317 KLGRFKEAGEVWSRMVANNHQPDTVTY 343
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 5/162 (3%)
Query: 325 VGCEPITLTYNYVLGVLCKNGQ--DADA--CELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+GC P ++N +L + + +ADA L GR P+ TY I + C G
Sbjct: 154 LGCNPGIRSHNALLDAFVRARRYSEADAFFASLSHGACGRRLAPNLQTYNIILRSLCARG 213
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
D A + F+ + +RG+ P T++ + G + ++A + D + + Y+
Sbjct: 214 DVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLVKHDQLDNALDLLDEMPDYGVQADAVCYN 273
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKN-GLRPNVSVYRRVLKHL 481
L S K A V +++++ G PN++ Y+ +L L
Sbjct: 274 ALLSGCFKTGMFEKAIKVWEQLVRDPGASPNLATYKVMLDGL 315
>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
Length = 759
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 95/218 (43%), Gaps = 11/218 (5%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTE-----RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
++++ + LG ++ A + + E + + YN L+ ++ F+ LL EM+Q G
Sbjct: 336 MVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRG 395
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
P LTY+ ++ CK+G DA L +++ PD + Y + C+ G D A
Sbjct: 396 ASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEAL 455
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGY----FIFYRYEDAYKYVVLSADKY--KSSSNMLYS 440
+M G++P + T+ + + Y + + ++ +L K S
Sbjct: 456 ALLEEMADNGIRPNVITYNSLLDAYGRQCLMVRKTFPKLRFFLLPRVTMLLKPSMQDDQQ 515
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
L K + A V EM KNG++PNV + +L
Sbjct: 516 SLVDPKQKQALVLAAARVFREMAKNGVKPNVVTFSSIL 553
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 1/177 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEM-RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
YN LI CR L+ M + G EP +TY+ ++ K G +A L +EM
Sbjct: 262 YNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEM 321
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
+N PD I Y + R+G FD A + M + G + T+ A + Y ++
Sbjct: 322 RNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKF 381
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+A + + S + + YS L + K+ A + ++ K GL+P+V +Y
Sbjct: 382 REAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLY 438
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 83/212 (39%), Gaps = 40/212 (18%)
Query: 272 LIEMFSVLGLYEMAKYVIKK-----TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
+I+ ++ LGL A + ++ E YN ++ R +F + M + G
Sbjct: 301 MIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAG 360
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
+TYN +L K G+ +A LLEEM R P+ +TY I C+ G A
Sbjct: 361 FAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAM 420
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
F + K GLQP + +LYS L
Sbjct: 421 ALFQDVKKAGLQPDV-----------------------------------VLYSTLVDGC 445
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
KN +P A +L EM NG+RPNV Y +L
Sbjct: 446 CKNGSPDEALALLEEMADNGIRPNVITYNSLL 477
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 79/199 (39%), Gaps = 4/199 (2%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
++E K V K + YN +I + D+ + EM + G P +T+N ++
Sbjct: 177 IFEAMKVVCKPN---LVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISA 233
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK-RGLQP 399
+ + + + EM R D +TY I CR G+ + M K G++P
Sbjct: 234 AGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEP 293
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
+ T++ I GY +A ++ + Y+ + +H + N A ++
Sbjct: 294 SVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIR 353
Query: 460 SEMMKNGLRPNVSVYRRVL 478
M + G ++ Y +L
Sbjct: 354 RAMEEAGFAKDIVTYNALL 372
>gi|255660986|gb|ACU25662.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 376
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 89/184 (48%), Gaps = 2/184 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI + F+ + EM + C P +TYN ++ LCKN +A L++E+L
Sbjct: 167 YNTLINGLVGASKFEDAIRVFREMGTMHCSPNIITYNTLINGLCKNEMFGEAYNLVKELL 226
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ +P ITY + + C K + A +NQ+ +G +P + H I G + +
Sbjct: 227 DKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNVLIHGLCSVGKMQ 286
Query: 419 DAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
A + +++K + N++ ++ L K+ + A + + +++NGL P++ Y
Sbjct: 287 LALS-LYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNIT 345
Query: 478 LKHL 481
LK L
Sbjct: 346 LKGL 349
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 97/226 (42%)
Query: 282 YEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+E+ + + + R VS +NI+++ + + M++ G ++TY ++
Sbjct: 45 FELWEMMGSEGNRSVSSFNIMMRGLFDNGKVDEVISIWELMKKSGFVEDSITYGILVHGF 104
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
CKNG + +LE + DA Y I C+ D A + N M+K G +P
Sbjct: 105 CKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNA 164
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
+ I G ++EDA + + S + + Y+ L + KN A N++ E
Sbjct: 165 HVYNTLINGLVGASKFEDAIRVFREMGTMHCSPNIITYNTLINGLCKNEMFGEAYNLVKE 224
Query: 462 MMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSVE 507
++ GL P V Y ++K L H+ A L ++ +S V+
Sbjct: 225 LLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQ 270
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 90/183 (49%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+++ +C+ + + +LL +M G P +TY ++ +NG+ E+ EML
Sbjct: 517 YNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEML 576
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P +TY + I G+ + AF +F++M ++G+ P + T+ + I G R +
Sbjct: 577 SKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMD 636
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
AY + +K + Y++L + + N A ++ +M+ G++P+ + +L
Sbjct: 637 QAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALL 696
Query: 479 KHL 481
K L
Sbjct: 697 KQL 699
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 1/187 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI CR + L E+R + P +TYN +L LC+ G+ A +L
Sbjct: 374 VVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKV 433
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM+ PD +TY I + SC++G +A FF++M+ GL+ +A I G
Sbjct: 434 EMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLG 493
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
A+ K ++Y+++ K N A +L +M+ +G+ P+ Y
Sbjct: 494 DTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYT 553
Query: 476 RVLKHLH 482
++ H H
Sbjct: 554 SII-HAH 559
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 65/139 (46%), Gaps = 3/139 (2%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
M ++ IK T + YN L+ C+ + DLL EM++ GC P +TYN ++ L K
Sbjct: 225 MGEFGIKPT---IVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSK 281
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
G+ A L+ EML A TY I G A + +MV +G P +AT
Sbjct: 282 KGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVAT 341
Query: 404 HAAFIKGYFIFYRYEDAYK 422
+ +FI G R DA +
Sbjct: 342 YNSFIYGLCKLGRMSDAMQ 360
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 69/150 (46%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
EM G P + YN V+ LCK G +A ELL++M+ PD +TY I G
Sbjct: 504 EMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENG 563
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+ F +M+ +GL P + T+ I G+ R E A+ Y +K + + Y+
Sbjct: 564 RLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYN 623
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
L + K A N +EM++ G+ PN
Sbjct: 624 SLINGLCKVRRMDQAYNFFAEMVEKGIFPN 653
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 82/218 (37%), Gaps = 35/218 (16%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE------ 352
YN L+ +CR+ + + + L VEM G P +TY ++ CK G + A E
Sbjct: 412 YNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEML 471
Query: 353 -----------------------------LLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
L EEML + PD I Y + + C++G +
Sbjct: 472 HEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLE 531
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
A +MV G+ P T+ + I + R + K + S + Y++L
Sbjct: 532 EASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLI 591
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
H A SEM + G+ PNV Y ++ L
Sbjct: 592 HGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGL 629
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 100/257 (38%), Gaps = 52/257 (20%)
Query: 271 ALIEMFSVLGLYEMAKYVIK---KTERKVS--YYNILIKEMCRRCDFKGPRDLLVEMRQV 325
LI S G +E AK +I KT KVS YN LI + L EM
Sbjct: 274 VLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLK 333
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITY--------------EI 371
G P TYN + LCK G+ +DA + L +ML N PD ++Y +
Sbjct: 334 GASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKA 393
Query: 372 FIVYS---------------------CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
F+++ CR G+ +VA +M+ G+ P + T+ + G
Sbjct: 394 FLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNG 453
Query: 411 ------YFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMK 464
+ + D + L D Y ++ ++ L K + A ++ EM+
Sbjct: 454 SCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGEL------KLGDTSRAFSLQEEMLA 507
Query: 465 NGLRPNVSVYRRVLKHL 481
G P++ +Y V+ L
Sbjct: 508 KGFPPDLIIYNVVVDGL 524
>gi|357498031|ref|XP_003619304.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494319|gb|AES75522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 805
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 109/245 (44%), Gaps = 26/245 (10%)
Query: 265 LVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM-- 322
+V + + F L+ + V+K V +NIL+ +C+ K ++++++M
Sbjct: 358 IVKRIPPTVVTFKAFSLFH--EMVLKNINPNVYTFNILVDALCKDGKIKEAKNVIIKMVD 415
Query: 323 ------RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
++ C+P T++YN ++ CK+G+ + A +LL++M R P+ ITY +
Sbjct: 416 EALNLFTEMHCKPNTVSYNTLIDGFCKSGRLSHAWKLLDQMRDRGQPPNVITYNSLLHAL 475
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA--------YKYVVLSA 428
C+ D A N +G+QP + T+ + G R +DA K L
Sbjct: 476 CKNHHVDKAIALVNNFKDQGIQPDMHTYNTLVDGLCKQGRLKDAQLIFQDLLIKGYNLPT 535
Query: 429 DKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEH 488
Y N L L L D+ A+ +LS+M NG P+V Y+ ++ L +
Sbjct: 536 WTYNIMINGL--CLEGLLDE------AETLLSKMEDNGCIPDVVTYQTIIHALFEKDEND 587
Query: 489 MAKCL 493
A+ L
Sbjct: 588 KAEKL 592
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 84/212 (39%), Gaps = 29/212 (13%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD--------- 349
Y ILI +C+ + +L ++ + Y+ V+ LCK+ D
Sbjct: 299 YGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTVIDGLCKDKLVIDAYGLYSEMI 358
Query: 350 ------------ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
A L EM+ +N +P+ T+ I + C+ GK A N +MV L
Sbjct: 359 VKRIPPTVVTFKAFSLFHEMVLKNINPNVYTFNILVDALCKDGKIKEAKNVIIKMVDEAL 418
Query: 398 --------QPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKN 449
+P ++ I G+ R A+K + D+ + + + Y+ L KN
Sbjct: 419 NLFTEMHCKPNTVSYNTLIDGFCKSGRLSHAWKLLDQMRDRGQPPNVITYNSLLHALCKN 478
Query: 450 NNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
++ A +++ G++P++ Y ++ L
Sbjct: 479 HHVDKAIALVNNFKDQGIQPDMHTYNTLVDGL 510
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 42/87 (48%)
Query: 324 QVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
++G EP T+T ++ LC NG+ +A + +L H + +TY I I C++G+
Sbjct: 254 KMGYEPNTITLTTLIKGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTR 313
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKG 410
A Q+ + + + ++ I G
Sbjct: 314 AALQVLRQIEGKLVNTNVVMYSTVIDG 340
>gi|357520891|ref|XP_003630734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524756|gb|AET05210.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 520
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 80/183 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ILI + D R+L M + GC L YN +L LCK G +A + L +ML
Sbjct: 216 YSILINGWGKIGDSGKARELFDAMLEQGCHVDLLAYNNLLEALCKGGHVDEAMDFLNDML 275
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PDA TY IFI C AF ++M + L P + T+ IK + E
Sbjct: 276 SKKVEPDAFTYSIFIRSYCDANNVHSAFGVLDKMRRCNLLPNVFTYNCIIKRLCKIKKVE 335
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+AY+ + Y+ + + H + A ++S M K+ P+ Y VL
Sbjct: 336 EAYQLLDEMISSGLKPDTWSYNAIQAYHCDHCEVNRALKLISRMEKDVCFPDRHTYNMVL 395
Query: 479 KHL 481
K L
Sbjct: 396 KLL 398
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 54/112 (48%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +IK +C+ + LL EM G +P T +YN + C + + A +L+ M
Sbjct: 321 YNCIIKRLCKIKKVEEAYQLLDEMISSGLKPDTWSYNAIQAYHCDHCEVNRALKLISRME 380
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
C PD TY + + R+G+FD A + M + P ++T++ I G
Sbjct: 381 KDVCFPDRHTYNMVLKLLIRIGRFDKATEVWECMGDKKFYPSVSTYSVMIHG 432
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/361 (21%), Positives = 146/361 (40%), Gaps = 42/361 (11%)
Query: 132 QVSEIIELLRSGDSETESKLLSMSVSLSNASVIEILRVLNSEKVSALCFLKYMREIMPEF 191
++S I+ R + E L S +S V ++L+ N SA F + + I P F
Sbjct: 45 EISRIVSDHRHPRHDLELSLTPFSTQISTDLVEQVLKRCNHLGFSAHRFFLWAKSI-PGF 103
Query: 192 YKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIW 251
+ ++++ GR + +L DF LI ++
Sbjct: 104 QHSVQSFHILVEILGRSKQF----AILWDF-----------------LIETRESDSS--- 139
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCD 311
++ N++ + RA + ++ M ++ IK + V ++L+ +C++
Sbjct: 140 --CKITNEIFWIIFTAYSRADLPDGAIRSFVRMDEFGIKPSIIDV---DLLLYTLCKKKH 194
Query: 312 FKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEI 371
+ + +++ T TY+ ++ K G A EL + ML + CH D + Y
Sbjct: 195 VRQAQQFFDQVKSHFL-LTTKTYSILINGWGKIGDSGKARELFDAMLEQGCHVDLLAYNN 253
Query: 372 FIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKY 431
+ C+ G D A +F N M+ + ++P T++ FI+ Y A+ + DK
Sbjct: 254 LLEALCKGGHVDEAMDFLNDMLSKKVEPDAFTYSIFIRSYCDANNVHSAFGVL----DKM 309
Query: 432 KSSSNML-----YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
+ N+L Y+ + K A +L EM+ +GL+P+ Y ++ H H
Sbjct: 310 R-RCNLLPNVFTYNCIIKRLCKIKKVEEAYQLLDEMISSGLKPDTWSY-NAIQAYHCDHC 367
Query: 487 E 487
E
Sbjct: 368 E 368
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 1/181 (0%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
KK E Y+I I+ C + +L +MR+ P TYN ++ LCK + +
Sbjct: 277 KKVEPDAFTYSIFIRSYCDANNVHSAFGVLDKMRRCNLLPNVFTYNCIIKRLCKIKKVEE 336
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A +LL+EM+ PD +Y Y C + + A ++M K P T+ +K
Sbjct: 337 AYQLLDEMISSGLKPDTWSYNAIQAYHCDHCEVNRALKLISRMEKDVCFPDRHTYNMVLK 396
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYS-LLASLHDKNNNPVMAKNVLSEMMKNGLR 468
R++ A + DK S YS ++ L K A + M+ G+
Sbjct: 397 LLIRIGRFDKATEVWECMGDKKFYPSVSTYSVMIHGLCKKKGKLEEACKYFAMMIDEGIP 456
Query: 469 P 469
P
Sbjct: 457 P 457
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 97/228 (42%), Gaps = 2/228 (0%)
Query: 257 LNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPR 316
+Q+ L+ G+ + E + L L + + + V YN +I MC+
Sbjct: 188 FDQISYGTLIHGLCKVGETRAALDLLQRVDGNL--VQPNVVMYNTIIDSMCKVKLVNEAF 245
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
DL EM G P +TY+ ++ C G+ DA +L +M+ N PD T+ I +
Sbjct: 246 DLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAF 305
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
C+ GK F+ M+K+G++P T+ + + GY + A A +
Sbjct: 306 CKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDI 365
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTS 484
YS++ + K A N+ EM + + P+V Y ++ L S
Sbjct: 366 QSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKS 413
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 100/216 (46%), Gaps = 13/216 (6%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTERKVSY------YNILIKEMCRRCDFKGPRDLLVEMRQV 325
LI F LGL A V K K+ Y + L K +C + + ++ +
Sbjct: 126 LINCFCQLGLIPFAFSVFAKI-LKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVAL 184
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G ++Y ++ LCK G+ A +LL+ + G P+ + Y I C+V + A
Sbjct: 185 GFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEA 244
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA---YKYVVLSADKYKSSSNMLYSLL 442
F+ F++MV +G+ P + T++A I G+ I + +DA + ++L K + +++L
Sbjct: 245 FDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYT---FNIL 301
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ K+ K V MMK G++PN Y ++
Sbjct: 302 VNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLM 337
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 115/258 (44%), Gaps = 15/258 (5%)
Query: 225 QVCLNEKAFGFLPVLISSKALTKKGIW-RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYE 283
+V L +AF ++S KGI VV + G C++ ++ I++F+
Sbjct: 237 KVKLVNEAFDLFSEMVS------KGISPDVVTYSALISGFCILGKLKDAIDLFN------ 284
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
K +++ + V +NIL+ C+ K + + M + G +P +TYN ++ C
Sbjct: 285 --KMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCL 342
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
+ A + M +PD +Y I I C++ KFD A N F +M ++ + P + T
Sbjct: 343 VKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVT 402
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
+++ I G R A + V D+ + Y+ + K + A +L++
Sbjct: 403 YSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFK 462
Query: 464 KNGLRPNVSVYRRVLKHL 481
G +P++S Y ++K L
Sbjct: 463 DKGFQPDISTYSILIKGL 480
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 99/232 (42%), Gaps = 8/232 (3%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
G CLV V +F+ MA+ + Y+I+I C+ F +L E
Sbjct: 339 GYCLVKEVNKAKSIFNT-----MAQ---GGVNPDIQSYSIMINGFCKIKKFDEAMNLFKE 390
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M + P +TY+ ++ L K+G+ + A +L+++M R P+ TY + C+ +
Sbjct: 391 MHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQ 450
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
D A + +G QP ++T++ IKG + EDA K K + Y++
Sbjct: 451 VDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTI 510
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
+ A +LS+M NG P+ Y ++ L + MA+ L
Sbjct: 511 MIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKL 562
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 93/224 (41%), Gaps = 7/224 (3%)
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMC 307
+ + Q G + + +I F + ++ A + K+ RK V Y+ LI +
Sbjct: 352 IFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLS 411
Query: 308 RRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAI 367
+ L+ +M G P TYN +L LCK Q A LL + + PD
Sbjct: 412 KSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDIS 471
Query: 368 TYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLS 427
TY I I C+ GK + A F ++ +G + + I+G+ + + +A +
Sbjct: 472 TYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKM 531
Query: 428 ADKYKSSSNMLYSLLA-SLHDKNNNPVMAKNVLSEMMKNGLRPN 470
D Y ++ SL K+ N MA+ +L EM+ GL N
Sbjct: 532 EDNGCIPDAKTYEIIILSLFKKDEND-MAEKLLREMIARGLPLN 574
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 66/157 (42%), Gaps = 8/157 (5%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P +N +LG L K+ L ++M R P+ + I I C++G AF+
Sbjct: 83 PPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSV 142
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY----KYVVLSADKYKSSSNMLYSLLAS 444
F +++K G P T KG + + + A+ K V L + S L L
Sbjct: 143 FAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCK 202
Query: 445 LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + A ++L + N ++PNV +Y ++ +
Sbjct: 203 VGETR----AALDLLQRVDGNLVQPNVVMYNTIIDSM 235
>gi|255660996|gb|ACU25667.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 376
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 88/184 (47%), Gaps = 2/184 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI + F+ + EM + C P +TYN ++ LCKN +A L++E+L
Sbjct: 167 YNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELL 226
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ +P ITY + + C K + A +NQ+ +G +P + H I G +
Sbjct: 227 DKGLNPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGEMQ 286
Query: 419 DAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
A + +++K + N++ ++ L K+ + A + + +++NGL P++ Y
Sbjct: 287 LALS-LYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNIT 345
Query: 478 LKHL 481
LK L
Sbjct: 346 LKGL 349
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 97/226 (42%)
Query: 282 YEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+E+ + + + R VS +NI+++ + + M++ G ++T+ ++
Sbjct: 45 FELWEMMGSEGNRSVSSFNIMMRGLFDNGKVDEVISIWELMKKSGFVEDSITFGILVHGF 104
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
CKNG + +LE + DA Y I C+ D A + N M+K G +P
Sbjct: 105 CKNGYINKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNGMIKSGCKPNA 164
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
+ I G ++EDA + + S + + Y+ L + KN A N++ E
Sbjct: 165 HVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKE 224
Query: 462 MMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSVE 507
++ GL P V Y ++K L H+ A L ++ +S V+
Sbjct: 225 LLDKGLNPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQ 270
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 44/100 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +NILI +C + + L +M + C P +++N ++ K+G +A +
Sbjct: 269 VQMHNILIHGLCSVGEMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWA 328
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR 395
+L PD I+Y I + C + A F + V +
Sbjct: 329 RILRNGLEPDIISYNITLKGLCSCNRISDAILFLHDAVTK 368
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 76/157 (48%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L+ EM+ G +P TYN V+ +LCK G+ A+A +L EM+ PD + Y I C
Sbjct: 210 LIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFC 269
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
++G A+ F++M KR + P T+ A I G R +A K K +
Sbjct: 270 KLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEV 329
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
Y+ L + K A ++ ++M++ GL PN+ Y
Sbjct: 330 TYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTY 366
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 56/112 (50%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI C+ + L EM++ P +TY V+ LC+ G+ +A +L EM+
Sbjct: 261 YTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMV 320
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ PD +TY I C+ GK AF+ NQM++ GL P + T+ A G
Sbjct: 321 CKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADG 372
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 94/216 (43%), Gaps = 2/216 (0%)
Query: 266 VSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
+ G++ ++ VL L E + IK + YN +I +C+ +L EM
Sbjct: 195 LDGIKIALKGEWVLKLIEEMQ--IKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISE 252
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P + Y ++ CK G + A L +EM R PD ITY I C+ G+ A
Sbjct: 253 GIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEA 312
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
F++MV + L+P T+ A I GY + ++A+ + + + Y+ LA
Sbjct: 313 DKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADG 372
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K A +L EM + GL N+ Y ++ L
Sbjct: 373 LCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGL 408
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 79/181 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L +C+ + +LL EM + G E TYN ++ LCK G A +L+++M
Sbjct: 366 YTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDME 425
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
HPDA+TY + C+ + A QM+ R LQP + T + G+ + E
Sbjct: 426 VAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLE 485
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
D K + +K + Y+ L + NN + M G+ P+ + Y ++
Sbjct: 486 DGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILI 545
Query: 479 K 479
K
Sbjct: 546 K 546
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 87/203 (42%), Gaps = 5/203 (2%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L+EM + K E + YN L+ +C+ + L+ +M G P +TY ++
Sbjct: 386 LHEMCR---KGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDA 442
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
CK+ + A ELL +ML R P +T+ + + C G + M+++G+ P
Sbjct: 443 YCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPN 502
Query: 401 LATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
T+ + IK Y I + Y + A N Y++L H K N A +
Sbjct: 503 ATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNT-YNILIKGHCKARNMKEAWFLH 561
Query: 460 SEMMKNGLRPNVSVYRRVLKHLH 482
+M+ G VS Y ++K +
Sbjct: 562 RDMVGKGFNLTVSSYNALIKGFY 584
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 78/193 (40%)
Query: 288 VIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQD 347
V K+ E Y LI C+ K L +M Q+G P +TY + LCK G+
Sbjct: 320 VCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEV 379
Query: 348 ADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAF 407
A ELL EM + + TY + C+ G D A M G P T+
Sbjct: 380 DTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTL 439
Query: 408 IKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
+ Y A++ + D+ + + +++L + + + +L M++ G+
Sbjct: 440 MDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGI 499
Query: 468 RPNVSVYRRVLKH 480
PN + Y ++K
Sbjct: 500 MPNATTYNSLIKQ 512
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 52/125 (41%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +N+L+ C + LL M + G P TYN ++ C E+
Sbjct: 468 VVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYR 527
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M + PD TY I I C+ A+ MV +G ++++ A IKG++
Sbjct: 528 GMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRK 587
Query: 416 RYEDA 420
++ +A
Sbjct: 588 KFLEA 592
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 80/180 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N ++ MC+ + R + EM + G P ++YN ++G CK G +A + EM
Sbjct: 223 FNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMT 282
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD +T+ I C+ G + A QM +RGLQ T A I G+ +
Sbjct: 283 QKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLD 342
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA V S + Y+ L + + A+ +L EM GL+P+V Y ++
Sbjct: 343 DALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTII 402
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 92/228 (40%), Gaps = 40/228 (17%)
Query: 271 ALIEMFSVLGLYEMAKYVIK-----KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI+ F G + A ++ + + V YN LI C R+LL EM
Sbjct: 330 ALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAK 389
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G +P +TY+ ++ CKN A EL ++ML + PDAITY I C + A
Sbjct: 390 GLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDA 449
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
F M+K GLQP T+ + I G+ E A SL
Sbjct: 450 HVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERAL----------------------SL 487
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
HDK M+K G+ P+V Y ++ L S + A+ L
Sbjct: 488 HDK-------------MVKAGVLPDVVTYSVLINGLSKSARAMEAQQL 522
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 59/116 (50%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YNILI+ +C R K +L +MR GC P +TYN ++ + G+ A L+
Sbjct: 150 VYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVG 209
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
ML P+ +T+ + C+ GK + A F++M++ GL P ++ + GY
Sbjct: 210 MMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGY 265
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 68/153 (44%)
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P TYN ++ LC G +A +L +M G C P+ +TY + R G+ D A
Sbjct: 145 GVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGA 204
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
M+ GL+P L T + + G + EDA K + + + Y+ L
Sbjct: 205 ERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGG 264
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ K A +V +EM + G+ P+V + ++
Sbjct: 265 YCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLI 297
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 104/255 (40%), Gaps = 55/255 (21%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI + ++G + A+ ++ + E K V Y+ +I C+ CD +L +M +
Sbjct: 365 ALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEK 424
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P +TY+ ++ VLC+ + +DA L + M+ PD TY I C+ G + A
Sbjct: 425 GVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERA 484
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGY-------------FIFYRYE--------DA---- 420
+ ++MVK G+ P + T++ I G F Y E DA
Sbjct: 485 LSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHC 544
Query: 421 -----------------YKYVVLSADKYKSS--------SNMLYSLLASLHDKNNNPVMA 455
K ++ ADK S +YS+L H + N + A
Sbjct: 545 CRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKA 604
Query: 456 KNVLSEMMKNGLRPN 470
+ +M++ G PN
Sbjct: 605 LSFHKQMLQRGFAPN 619
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 81/183 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ C+ + EM Q G P +T+ ++ V+CK G A L+ +M
Sbjct: 258 YNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMR 317
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R + +T+ I C+ G D A M + ++P + + A I GY + R +
Sbjct: 318 ERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMD 377
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + + K + YS + S + KN + A + +M++ G+ P+ Y ++
Sbjct: 378 EARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLI 437
Query: 479 KHL 481
+ L
Sbjct: 438 RVL 440
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 24/141 (17%)
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
C G +A ++ + ML RN + D Y + I CR G A +F QM++RG P
Sbjct: 561 CMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNS 620
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKY------------KSSSNMLYSLLASLHDKN 449
+ + I+G F E+ +V+ AD+ +S L L +L++ N
Sbjct: 621 TSTISLIRGLF-----ENG---MVVEADQVIQQLLNCCSLADAEASKALIDL--NLNEGN 670
Query: 450 NNPVMAKNVLSEMMKNGLRPN 470
+ V+ +VL M K+GL P+
Sbjct: 671 VDAVL--DVLHGMAKDGLLPS 689
>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
Length = 607
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 93/230 (40%), Gaps = 4/230 (1%)
Query: 265 LVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQ 324
++SG+ + + K K +RK YNILI CR+ L EM+
Sbjct: 353 MISGLTQAGRLVDACNIAASMKKAGFKLDRKA--YNILIGGFCRKKRLHEAHQLFEEMKG 410
Query: 325 VGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
G +P TYN +L LCK G + ELL M+ C P +T+ + C+ GK D
Sbjct: 411 AGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDE 470
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSNMLYSLLA 443
A F M + +QP + I + A K + + + ++ +LL
Sbjct: 471 ALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLK 530
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
L DK N P A ++ +M + P+ +++ L + KC
Sbjct: 531 GLQDK-NMPEKAFELMDQMKEERCTPDYVTMDVLMEWLPEIGETERLKCF 579
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 82/220 (37%), Gaps = 41/220 (18%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
VS +N L+ + R + +G +L MR+ +P +TY +L LCK G DA ++L+
Sbjct: 131 VSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALKVLD 190
Query: 356 EM-----------------------LGR----------------NCHPDAITYEIFIVYS 376
M +GR C P+ +TY
Sbjct: 191 RMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNCLADAC 250
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
CRVG D+A +M K G+ P + T + G R A + + +
Sbjct: 251 CRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEARG 310
Query: 437 --MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ YS L S NN +A + EM G P+ +Y
Sbjct: 311 NAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMY 350
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 11/175 (6%)
Query: 322 MRQV-GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
MRQV GC P T+TYN + C+ G AC+++E M P+ IT + CRVG
Sbjct: 230 MRQVHGCAPNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVG 289
Query: 381 KFDVAFNFFNQMVKRGLQPR--LATHAAFIKGYFIFYRYEDAYKYVVLSADK-YKSSSNM 437
+ A +FF + L+ R T++ + + A + AD+ Y + M
Sbjct: 290 RVGAALDFFREKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVM 349
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL------KHLHTSHQ 486
+++++ L + V A N+ + M K G + + Y ++ K LH +HQ
Sbjct: 350 YFTMISGL-TQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQ 403
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 65/182 (35%), Gaps = 2/182 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE-- 356
YN L CR D ++ M + G P +T N ++G LC+ G+ A + E
Sbjct: 243 YNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKR 302
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
+A+TY + +A F++M +G P + I G R
Sbjct: 303 TTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGR 362
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
DA Y++L + A + EM GL+P+V Y
Sbjct: 363 LVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNT 422
Query: 477 VL 478
+L
Sbjct: 423 LL 424
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 100/282 (35%), Gaps = 42/282 (14%)
Query: 245 LTKKGIWRVVEVLNQ-VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILI 303
+ K+G+ V +N VGG C V V A ++ F E ++ V+Y + L+
Sbjct: 266 MEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFR-----EKRTTWLEARGNAVTY-STLV 319
Query: 304 KEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH 363
+ +L EM G P + Y ++ L + G+ DAC + M
Sbjct: 320 SAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIAASMKKAGFK 379
Query: 364 PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH------------------- 404
D Y I I CR + A F +M GLQP + T+
Sbjct: 380 LDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDEL 439
Query: 405 ----------------AAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
+ GY + ++A K + + ++Y+ L K
Sbjct: 440 LGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCK 499
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
+ +A + EM +N + NV+ Y +LK L + A
Sbjct: 500 SREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKA 541
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 44/98 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C+ + L EMR+ TYN +L L A EL+++M
Sbjct: 490 YNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMK 549
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
C PD +T ++ + + +G+ + F Q ++G
Sbjct: 550 EERCTPDYVTMDVLMEWLPEIGETERLKCFMEQRDEKG 587
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 90/199 (45%)
Query: 280 GLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
G +AK + + + LI+ +C L +M G +P +TY ++
Sbjct: 128 GFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIH 187
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
LCK G A LL M+ +NC P+ ITY I + + + A N F++M+ +G+ P
Sbjct: 188 GLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISP 247
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
++T+ + I G F ++ + D + ++++ L K +A +V+
Sbjct: 248 NVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVV 307
Query: 460 SEMMKNGLRPNVSVYRRVL 478
M++ G+ P+V Y ++
Sbjct: 308 DVMIQRGVEPDVVTYTALM 326
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 80/183 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C + L EM G P +TY +L LCK A +L+ +
Sbjct: 392 YNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIE 451
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
G N PD +Y I I CRVG+ + A + F+ + +GL P + T+ I G +
Sbjct: 452 GSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLA 511
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A K S + Y+L+ +NN + A +L EM+ G + S ++
Sbjct: 512 EATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIV 571
Query: 479 KHL 481
+ L
Sbjct: 572 EML 574
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 94/222 (42%), Gaps = 8/222 (3%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+ G C V RA I + + V K E V YN +I + + ++
Sbjct: 186 IHGLCKVGNSRAAIRLLRSM--------VQKNCEPNVITYNTIIDCLFKDRQVNEALNIF 237
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
EM G P TYN ++ LCK + L+ EM+ P+ + + + C+
Sbjct: 238 SEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKE 297
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
G +A + + M++RG++P + T+ A + G+ + ++A K K + + + Y
Sbjct: 298 GMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISY 357
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
S L + + K A + EM + L PN+ Y ++ L
Sbjct: 358 STLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGL 399
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 83/202 (41%), Gaps = 40/202 (19%)
Query: 301 ILIKEMCR--RCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
I+I C R DF +L ++ ++G +P T T+ ++ LC G+ +A L ++M+
Sbjct: 114 IVINSFCHLNRVDFG--FSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMV 171
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
G P+ +TY I C+VG A MV++ +P + T+ I F
Sbjct: 172 GEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLF------ 225
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
D+ N A N+ SEM+ G+ PNVS Y ++
Sbjct: 226 ---------------------------KDRQVNE--ALNIFSEMIAKGISPNVSTYNSII 256
Query: 479 KHL-HTSHQEHMAKCLSSRYSS 499
L S +H+A ++ S
Sbjct: 257 HGLCKFSEWKHVATLMNEMVDS 278
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 90/223 (40%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
M + V K V + L+ +C+ D++ M Q G EP +TY ++ C
Sbjct: 272 MNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCL 331
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
+ +A ++ + M+ + C P+ I+Y I C++ + D A F +M +R L P + T
Sbjct: 332 RSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVT 391
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
+ I G R DA + + Y +L K + A +L +
Sbjct: 392 YNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIE 451
Query: 464 KNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
+ L P++ Y V+ + + A L S SS L V
Sbjct: 452 GSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDV 494
>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
Length = 719
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 86/194 (44%), Gaps = 5/194 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +I +C F R L EM G +P TYN +L K+G ACEL EM
Sbjct: 336 YTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMC 395
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ +T I C GK D AF F +M + G+Q T+ + I+G+ + +
Sbjct: 396 NKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVD 455
Query: 419 DAYKYV--VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
+ + +++ D S S LY LL K+ + AK +L +M GL PN Y
Sbjct: 456 ERMNLLNELVAQDPQPSVS--LYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDT 513
Query: 477 VLK-HLHTSHQEHM 489
+L L + EH+
Sbjct: 514 MLHGSLKSGDFEHV 527
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 83/181 (45%), Gaps = 2/181 (1%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N +I E+C R ++ +M + G + +TYN ++ CK G+ + LL E++
Sbjct: 407 NKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVA 466
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
++ P YE+ I+ SC+ G F+ A M +GL P T+ + G +E
Sbjct: 467 QDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEH 526
Query: 420 AYKYVVLSADK-YKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ + +K Y +++ +++ L + + A + +M + G++ + Y ++
Sbjct: 527 VRELYNETCNKGYGTTTATCNKIISELCSRGKSD-EASEMFKKMSETGIKADAITYNSLI 585
Query: 479 K 479
+
Sbjct: 586 R 586
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 97/220 (44%), Gaps = 19/220 (8%)
Query: 280 GLYEMAKYVIKKTERKVSY-----YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
G +E AK ++ K + Y+ ++ + DF+ R+L E G T T
Sbjct: 487 GDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATC 546
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N ++ LC G+ +A E+ ++M DAITY I C+ GK + N N++V
Sbjct: 547 NKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVA 606
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPV 453
+GLQP +++A+ I E A + + + + + +N+ L++ L K
Sbjct: 607 QGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLC-KQGRAT 665
Query: 454 MAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
+ L M++N ++P + + E +A+CL
Sbjct: 666 EGMDRLMGMLENKIKPKKAAF------------EDLAECL 693
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 83/195 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI+ C+ +LL E+ +P Y ++ CK+G A LL +M
Sbjct: 441 YNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMS 500
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ HP+A TY+ + S + G F+ +N+ +G AT I + +
Sbjct: 501 SKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSD 560
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + ++ + + Y+ L K + N+L+E++ GL+P+ S Y ++
Sbjct: 561 EASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLI 620
Query: 479 KHLHTSHQEHMAKCL 493
L + AK L
Sbjct: 621 IQLCQNGDAESAKRL 635
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 2/182 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI C+ ++ ++L M P TY ++ LCKN + +A + ++
Sbjct: 266 YNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLK 325
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R PD + Y I C +G F A + +M+ +G+QP T+ + G +E
Sbjct: 326 DRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFE 385
Query: 419 DAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
A + Y + Y +++ +++ L + + A V +M + G++ + Y +
Sbjct: 386 RACELYNEMCNKGYGTTTVTCNKIISELCSRGKSD-EAFEVFKKMSETGIQADAITYNSL 444
Query: 478 LK 479
++
Sbjct: 445 IR 446
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 90/240 (37%), Gaps = 11/240 (4%)
Query: 245 LTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKK---TERKVSYYNI 301
L + GI + N + CL +G L L+E + +IK ++
Sbjct: 182 LKEAGIRISIVACNSILSGCLKAGKTEL--------LFEFYQEMIKAGTASDANTETVGC 233
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
LI+ C +LL + + G +P TYN ++ C+ A E+L M+ RN
Sbjct: 234 LIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARN 293
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
P TY+ I C+ + A+ FN + RG P + I G + +A
Sbjct: 294 HLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEAR 353
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K DK + Y+ + K+ + A + +EM G +++ L
Sbjct: 354 KLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISEL 413
>gi|15240991|ref|NP_198689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171307|sp|Q9FKR3.1|PP404_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g38730
gi|10176899|dbj|BAB10131.1| unnamed protein product [Arabidopsis thaliana]
gi|332006971|gb|AED94354.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 90/196 (45%), Gaps = 2/196 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI CR D L M G P +TYN +L LC++G+ +A LL EM
Sbjct: 310 YTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMS 369
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
G+ PD IT I C++ A +M++ GL+ + ++ A I G+ E
Sbjct: 370 GKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELE 429
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLA-SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+A + + +K S YS L +++N + K +L E K GL +V++YR +
Sbjct: 430 NAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITK-LLEEFEKRGLCADVALYRGL 488
Query: 478 LKHLHTSHQEHMAKCL 493
++ + Q AK L
Sbjct: 489 IRRICKLEQVDYAKVL 504
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL-GVLCKNGQDADACELLEEM 357
Y LI C+ + + ++ L M + G P TY++++ G +N QD + +LLEE
Sbjct: 415 YKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQD-EITKLLEEF 473
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
R D Y I C++ + D A F M K+GL
Sbjct: 474 EKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGL 513
>gi|357129397|ref|XP_003566348.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Brachypodium distachyon]
Length = 649
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 147/361 (40%), Gaps = 28/361 (7%)
Query: 134 SEIIELLRSG-DSETESKLLSMSVSLSNASVIEILRVLNSEKVSALCFLKYMREIMPEFY 192
+ I +++ +G D+ E+ L ++S LS A V+ +L + F ++ EF
Sbjct: 177 AAIADVMAAGADANLEATLSALSPPLSEALVLAVLDRFKHAHRPSRRFFQWA-AASDEFE 235
Query: 193 KNSDICSLVIDNCGRLDDYETMRQLLNDFN-VYQVCLNEKAFGFLPVLISSKALTKKGIW 251
++ G+ +ETM L+ + +C++ AF I+ K+ G
Sbjct: 236 HTPVTYCKMLHILGKARQFETMVALVQEMGKAGALCMD--AFK-----IAIKSFAAAG-- 286
Query: 252 RVVEVLNQVG--GSCLVSGVRALIEMFSVL-------GLYEMAKYVIKKTERK----VSY 298
E+ N VG V G +E F+ L GL + A V + + +
Sbjct: 287 ---EIKNAVGVFEMMRVHGFDDGVESFNCLLVALAQEGLGKEAARVFDRMRDQYTPDLRS 343
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ C + + +M + G +P + +N ++ L + + +A ++ E M
Sbjct: 344 YTALMLAWCNARNLVEAGRVWNDMLEKGMKPDVVVHNTMIDGLLRGQRRPEAVKMFELMK 403
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+ TY + I C+ GK D+A F +M G QP +AT+ + GY R +
Sbjct: 404 AKGPPPNVWTYTMLIRDHCKQGKLDMAMRCFEEMQVAGCQPEVATYTCLLVGYGNAKRMD 463
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ A K Y+ L L N P A + +M+ GL P + Y ++
Sbjct: 464 RVTAMLEEMAQKGCPPDGRTYNALIKLLTNRNMPDDAVRIYKKMITKGLEPTIHTYNMMM 523
Query: 479 K 479
K
Sbjct: 524 K 524
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 5/138 (3%)
Query: 263 SCLVSGVRALIEMFSVLG-LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
+CL+ G M V L EMA+ R YN LIK + R + +
Sbjct: 450 TCLLVGYGNAKRMDRVTAMLEEMAQKGCPPDGRT---YNALIKLLTNRNMPDDAVRIYKK 506
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQD-ADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
M G EP TYN ++ G++ A C + EEM + PD +Y +FI R G
Sbjct: 507 MITKGLEPTIHTYNMMMKSYFLGGRNYAMGCAVWEEMHRKGICPDVNSYTVFINGHIRHG 566
Query: 381 KFDVAFNFFNQMVKRGLQ 398
+ A F +M+++G++
Sbjct: 567 RPAEACKFLEEMIQKGMK 584
Score = 41.6 bits (96), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 11/113 (9%)
Query: 286 KYVIKKTERKVSYYNILIKEMCRRCDFKGPRD------LLVEMRQVGCEPITLTYNYVLG 339
K + K E + YN+++K F G R+ + EM + G P +Y +
Sbjct: 506 KMITKGLEPTIHTYNMMMKSY-----FLGGRNYAMGCAVWEEMHRKGICPDVNSYTVFIN 560
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
++G+ A+AC+ LEEM+ + I Y F + GK D+ + ++
Sbjct: 561 GHIRHGRPAEACKFLEEMIQKGMKAPQIDYNKFAADFSKAGKPDILYELAQKV 613
>gi|326514834|dbj|BAJ99778.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 609
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 15/206 (7%)
Query: 221 FNVYQVCLNEKA--FGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSV 278
+NV L E+ G P L++ + K+G+ +N + + AL V
Sbjct: 131 YNVVISGLTEQGRHGGLAPALLAE--MCKRGVPFDAVTVN--------TALVALCRDGQV 180
Query: 279 LGLYEMAKYVIKKTE---RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYN 335
G +A+ +++ E V +N L+ C+ D + MR G + YN
Sbjct: 181 EGAAALAEMMVRGREIHRLDVVGWNALLDGYCKSGDMEAALTAAQRMRTQGVGVDVVGYN 240
Query: 336 YVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR 395
++ LC+ G+ A +LE M G P+ +TY FI CR D AF+ + +MV+
Sbjct: 241 TLVAGLCRAGEADAARGMLETMKGDGVEPNVVTYTTFIAECCRTNAVDDAFSLYEEMVRM 300
Query: 396 GLQPRLATHAAFIKGYFIFYRYEDAY 421
G+ P + T +A + G R+ +AY
Sbjct: 301 GVLPDVVTLSALVDGLCRAGRFSEAY 326
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P +TY ++ LC+ G A ++L EM ++ HP+ +T+ I + G A ++
Sbjct: 409 PNGVTYTVLIDALCRAGNVDGAEQMLLEMEDKSVHPNVVTFSSIINGLTKQGLLGKAADY 468
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
+M +RG+ P + T+ + G+F E A
Sbjct: 469 MRKMKERGIDPNVVTYGTVMDGFFKCQEQESA 500
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 92/225 (40%), Gaps = 2/225 (0%)
Query: 257 LNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPR 316
++ VG + LV+G+ E + G+ E K E V Y I E CR
Sbjct: 234 VDVVGYNTLVAGLCRAGEADAARGMLETMKG--DGVEPNVVTYTTFIAECCRTNAVDDAF 291
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
L EM ++G P +T + ++ LC+ G+ ++A L EM P+ +TY I
Sbjct: 292 SLYEEMVRMGVLPDVVTLSALVDGLCRAGRFSEAYALFREMEKIGAAPNHVTYCTLIDSL 351
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
+ + + ++V RG+ L + + + + ++ + + +
Sbjct: 352 WKARRGSESHGLLGEVVSRGVVMDLVMYTSLMDWLGKQGKIDEVKDMFHCALSDNHTPNG 411
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ Y++L + N A+ +L EM + PNV + ++ L
Sbjct: 412 VTYTVLIDALCRAGNVDGAEQMLLEMEDKSVHPNVVTFSSIINGL 456
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 49/100 (49%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +LI +CR + G +L+EM P +T++ ++ L K G A + + +M
Sbjct: 414 YTVLIDALCRAGNVDGAEQMLLEMEDKSVHPNVVTFSSIINGLTKQGLLGKAADYMRKMK 473
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
R P+ +TY + + + + A + +++M+ G++
Sbjct: 474 ERGIDPNVVTYGTVMDGFFKCQEQESALDLYHEMLCEGVE 513
>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 524
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 102/232 (43%), Gaps = 23/232 (9%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
++ V Y I+IK +C+ L EMR G P +TY+ ++ LCK+ + +
Sbjct: 304 RRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISH 363
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A ELL++M R D ITY F+ C+ + D A ++ +G+QP + T+ I
Sbjct: 364 AWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILID 423
Query: 410 GYFIFYRYEDA-----------YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNV 458
G R+E+A YK V + Y N L L L D+ A +
Sbjct: 424 GLCKEGRFENAQVIFQDLLIKGYKVTVWT---YNIMINGL--CLEGLFDE------AMTL 472
Query: 459 LSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA-KCLSSRYSSLSLGSSVEAR 509
L +M NG P+V Y +++ L + + H A K L + L VE R
Sbjct: 473 LEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARGLLEEKVEIR 524
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 81/183 (44%), Gaps = 18/183 (9%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ILI +C+ + + +L ++ + Y+ ++ LCK +A EL +M+
Sbjct: 156 YGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMI 215
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD +T+ I C VG+F AF F++MV + P + T +
Sbjct: 216 VKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILV---------- 265
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA + K + N+L ++ ++ N AK+V + + K + P+V Y ++
Sbjct: 266 DA----LCKEGSTKETKNVLAVMMKEVNQVNK----AKHVFNIIGKRRVTPDVHSYTIII 317
Query: 479 KHL 481
K L
Sbjct: 318 KRL 320
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 267 SGVRALIEMFSVL-------GLYEMAKYV-----IKKTERKVSYYNILIKEMCRRCDFKG 314
G++ I +++L G +E A+ + IK + V YNI+I +C F
Sbjct: 409 QGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDE 468
Query: 315 PRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGR 360
LL +M GC P +TY ++ L KN ++ A +LL EM+ R
Sbjct: 469 AMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIAR 514
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 53/277 (19%), Positives = 106/277 (38%), Gaps = 54/277 (19%)
Query: 257 LNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPR 316
LN+V L++G+ + E + L + + K K V Y+ +I +C+
Sbjct: 151 LNEVSYGILINGLCKMGETRAALQV--LRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAY 208
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFI--- 373
+L +M P +T++ ++ C GQ +A L EM+ N +PD T+ I +
Sbjct: 209 ELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDAL 268
Query: 374 -----------------------------------------VYS--------CRVGKFDV 384
V+S C++ D
Sbjct: 269 CKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDE 328
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLAS 444
A + FN+M +G+ P T+++ I G R A++ + + + + + Y+
Sbjct: 329 ALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLH 388
Query: 445 LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
KN+ A ++ ++ G++PN++ Y ++ L
Sbjct: 389 ALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGL 425
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 62/146 (42%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P +T+N V+ C G+ A +L ++L HPD IT I C GK A +F
Sbjct: 81 PSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHF 140
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
+ ++ RG + ++ I G A + + K +++ ++YS + K
Sbjct: 141 HDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCK 200
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVY 474
A + S+M+ + P+V +
Sbjct: 201 EKLVTEAYELYSQMIVKKVSPDVVTF 226
>gi|3193306|gb|AAC19289.1| contains similarity to Arabidopsis membrane-associated
salt-inducible-like protein (GB:AL021637) [Arabidopsis
thaliana]
Length = 991
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ +CR+ + LL M+ GC P + YN ++ C+ + DA ++L++ML
Sbjct: 263 YTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDML 322
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C P++++Y I C G FD + +M+ +G P + +KG+ F + E
Sbjct: 323 SNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVE 382
Query: 419 DA 420
+A
Sbjct: 383 EA 384
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%)
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P T +YN ++ C N + A +L +ML R+ PD +Y+I I CR G+ + A
Sbjct: 185 GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGA 244
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
+ M+ +G P ++ + + +AYK + K + + Y+ +
Sbjct: 245 MELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILG 304
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + + A+ VL +M+ NG PN YR ++ L
Sbjct: 305 FCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGL 340
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 2/176 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+L++ C D L +M + P +Y ++ C+ GQ A ELL++ML
Sbjct: 193 YNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDML 252
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD ++Y + CR + A+ +M +G P L + I G+ R
Sbjct: 253 NKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAM 312
Query: 419 DAYKYVVLSADKYKSSSNMLY-SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
DA K + S +++ Y +L+ L D+ K L EM+ G P+ SV
Sbjct: 313 DARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFD-EGKKYLEEMISKGFSPHFSV 367
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
+YN +I CR R +L +M GC P +++Y ++G LC G + + LEEM
Sbjct: 297 HYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEM 356
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
+ + P + C GK + A + ++K G
Sbjct: 357 ISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 395
>gi|255660980|gb|ACU25659.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 376
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 88/184 (47%), Gaps = 2/184 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI + F+ + EM + C P +TYN ++ LCKN A L++E+L
Sbjct: 167 YNTLINGLVGASKFEDAIRVFREMXTMHCSPTIITYNTLINGLCKNEMFGXAYNLVKELL 226
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ +P ITY + + C K + A +NQ+ +G +P + H I G + +
Sbjct: 227 DKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQ 286
Query: 419 DAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
A + +++K + N++ ++ L K+ + A + + +++NGL P++ Y
Sbjct: 287 LALS-LYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNIT 345
Query: 478 LKHL 481
LK L
Sbjct: 346 LKGL 349
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 94/226 (41%)
Query: 282 YEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+E+ + + + R VS +NI+++ + + M+ G ++TY ++
Sbjct: 45 FELWEMMGSEGNRSVSSFNIMMRGLFDNGKVXEVIXIWELMKXSGFVEDSITYGILVHGF 104
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
C NG + +LE + A Y I C+ B A + N M+K G +P
Sbjct: 105 CXNGYIDKSLHVLEMAEQKGGVLXAFAYSAMINGLCKEANLBRAVSVLNGMIKSGCKPNA 164
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
+ I G ++EDA + + S + + Y+ L + KN A N++ E
Sbjct: 165 HVYNTLINGLVGASKFEDAIRVFREMXTMHCSPTIITYNTLINGLCKNEMFGXAYNLVKE 224
Query: 462 MMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSVE 507
++ GL P V Y ++K L H+ A L ++ +S V+
Sbjct: 225 LLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQ 270
>gi|255660940|gb|ACU25639.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 484
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%)
Query: 292 TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADAC 351
ER + Y+ L K + RR + + +M G EP T+N ++ +G+ A
Sbjct: 111 VERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMMWGFFLSGKVETAN 170
Query: 352 ELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
E+M R PD +TY + CRV K + A +F +M R ++P + T+ IKGY
Sbjct: 171 RFFEDMKSREIMPDVVTYNTMVNGYCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230
Query: 412 FIFYRYEDAYKYV 424
R +DA ++V
Sbjct: 231 VSVDRVDDALRFV 243
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 11/209 (5%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L EM I T+ S + LI C+ D ++L M ++ Y ++
Sbjct: 278 LKEMVDKYIAPTDN--SIFMRLISGQCKAGDLDAAANVLKAMIRLSVPTEAGHYGVLIEN 335
Query: 341 LCKNGQDADACELLEEMLGRNC--------HPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
CK G+ A +LL++++ ++ H ++ Y I Y C G+ A Q+
Sbjct: 336 YCKAGEYDKAIKLLDKVIEKDIILRPQSTLHMESSAYNPLIEYLCNNGQTAKAEALVRQL 395
Query: 393 VKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNP 452
+K G+Q A + I+G+ + A++ + + + S Y L + K N P
Sbjct: 396 MKLGVQDPTALNT-LIRGHSQEGSPDSAFELLKIMLRRKVDSEQSAYDSLVQSYLKKNEP 454
Query: 453 VMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
AK L M++NG P+ S++R V++ L
Sbjct: 455 ADAKAALDSMIENGHLPDSSLFRSVMESL 483
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 58/112 (51%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I + + MR G P +TYN ++G LC G+ A E+++E+L
Sbjct: 134 YNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELL 193
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
C P ITY I I + G+ + A F+++V RGL+P L T+ A I+G
Sbjct: 194 KDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRG 245
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 114/296 (38%), Gaps = 49/296 (16%)
Query: 234 GFLPVLISSKALTK--------KGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMA 285
GF P ++ L K K RV+E+L G + S A+I FS + A
Sbjct: 92 GFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYGDPDVYS-YNAMISGFSKANQIDSA 150
Query: 286 KYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY------ 334
V + + V YNI+I +C R + +++ E+ + GC+P +TY
Sbjct: 151 NQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEA 210
Query: 335 -----------------------------NYVLGVLCKNGQDADACELLEEMLGRNCHPD 365
N ++ +CK G + A + + + R C+PD
Sbjct: 211 TILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPD 270
Query: 366 AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV 425
++Y I + +++ MV G +P + TH+ I + R +A +
Sbjct: 271 VVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLE 330
Query: 426 LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ +K + + Y L S K +A L +M+ +G P++ Y +L L
Sbjct: 331 VMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATL 386
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 83/195 (42%), Gaps = 35/195 (17%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
M V+ E V ++ILI CR + ++L M++ G P + +Y+ ++ CK
Sbjct: 294 MKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCK 353
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
G+ A E LE+M+ C PD + Y + C+ G D+A + F ++ + G P +
Sbjct: 354 EGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRA 413
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
+ N ++S L S +K + A ++SEM+
Sbjct: 414 Y-------------------------------NTMFSALWSCGNK----IKALEMISEMI 438
Query: 464 KNGLRPNVSVYRRVL 478
+ G+ P+ Y ++
Sbjct: 439 RKGIDPDEITYNSLI 453
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 76/186 (40%), Gaps = 11/186 (5%)
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVS--------YYNILIK 304
V+EV+ + G + LI F G ++A I+ E+ VS YN ++
Sbjct: 328 VLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLA---IEYLEKMVSDGCLPDIVNYNTILA 384
Query: 305 EMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHP 364
+C+ D+ ++ +VGC P YN + L G A E++ EM+ + P
Sbjct: 385 TLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDP 444
Query: 365 DAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV 424
D ITY I CR G D A M QP + + + G +R + + +
Sbjct: 445 DEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELL 504
Query: 425 VLSADK 430
+ +K
Sbjct: 505 ITMVEK 510
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 7/123 (5%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
+++ EM + G +P +TYN ++ LC++G +A LL +M P I++ I ++
Sbjct: 432 EMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGM 491
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY-FIFYRYE------DAYKYVVLSAD 429
C+ + MV++G P ++ I+G + +R E Y+ V+S D
Sbjct: 492 CKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSLYRLGVISGD 551
Query: 430 KYK 432
K
Sbjct: 552 SSK 554
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 1/115 (0%)
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
SCR GK + + F +V +G +P + IKG+F + A + V+ + Y
Sbjct: 72 SCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMR-VMEILETYGDPD 130
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
Y+ + S K N A V M G P+V Y ++ L + + +A
Sbjct: 131 VYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELA 185
>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 1 [Brachypodium distachyon]
gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 2 [Brachypodium distachyon]
Length = 704
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 94/194 (48%), Gaps = 7/194 (3%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
++ + YNI+++ +C R D L +R G P +TY+ ++ KN + +
Sbjct: 153 RRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDN 212
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR-GLQPRLATHAAFI 408
A LL+EM PDA+ Y + R G+F+ A + Q+V+ G P LAT+ +
Sbjct: 213 ALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVML 272
Query: 409 KG---YFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKN 465
G +F D ++ +V A+ ++ +++ L ++ + A V SEM+K
Sbjct: 273 DGLCKLGMFKEAGDVWERMV--ANNHQPDMITYGTMIHGLC-RSTDVDSAARVYSEMIKT 329
Query: 466 GLRPNVSVYRRVLK 479
GL P+V +Y +LK
Sbjct: 330 GLVPDVVIYNSLLK 343
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 3/226 (1%)
Query: 257 LNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPR 316
L++ S ++SG+ + + LYE K + + YN LI C+ F
Sbjct: 438 LDEFSYSSMISGLCKDGRLDDAVKLYE--KISMDSFKPNSHIYNALINGFCQASKFSDAI 495
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
+ +M + C P T+TYN ++ LCK + +A EML + C D TY I
Sbjct: 496 RVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGL 555
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
CR K D A +NQ++ +GLQ + H I G + ++A + + +K N
Sbjct: 556 CRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPN 615
Query: 437 ML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
++ Y+ L + A ++ +++NGL P++ Y +K L
Sbjct: 616 VVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGL 661
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 4/144 (2%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM-RQVGCEPITLTYNYVLG 339
L EM Y ++ YN L+ R +F+ + ++ R G P TYN +L
Sbjct: 217 LDEMPSYEVQP---DAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLD 273
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
LCK G +A ++ E M+ N PD ITY I CR D A +++M+K GL P
Sbjct: 274 GLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVP 333
Query: 400 RLATHAAFIKGYFIFYRYEDAYKY 423
+ + + +KG+ R +A+K+
Sbjct: 334 DVVIYNSLLKGFCHAGRVGEAWKF 357
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 63/139 (45%), Gaps = 7/139 (5%)
Query: 280 GLYEMAKYVIKKTERK------VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLT 333
G +E A V ++ R ++ YN+++ +C+ FK D+ M +P +T
Sbjct: 243 GEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMIT 302
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
Y ++ LC++ A + EM+ PD + Y + C G+ A+ F++ M
Sbjct: 303 YGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMS 362
Query: 394 KRGLQPRLATHAAFIKGYF 412
G++ + ++ +KG F
Sbjct: 363 VSGIR-NVTSYNIMLKGLF 380
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 7/163 (4%)
Query: 325 VGCEPITLTYNYVLG--VLCKNGQDADA--CELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+GC P ++N +L V + DADA L GR P+ TY I + C G
Sbjct: 114 LGCNPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRG 173
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML-Y 439
D A F+ + RGL P T++ + G+ R ++A Y++ Y+ + + Y
Sbjct: 174 DLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNAL-YLLDEMPSYEVQPDAVCY 232
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKN-GLRPNVSVYRRVLKHL 481
+ L +N A V +++++ G PN++ Y +L L
Sbjct: 233 NALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGL 275
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 84/184 (45%), Gaps = 5/184 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
++ +I +C + +L E R G E +Y+ ++ LCK+G+ DA +L E++
Sbjct: 408 FSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKIS 467
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P++ Y I C+ KF A ++QM + P T+ I G +Y
Sbjct: 468 MDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYL 527
Query: 419 DAYKYVVLSADKY-KSSSNMLYSLLASL-HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
+A ++ +K N SL+ L DK + +A + ++++ GL+ +V V
Sbjct: 528 EASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALA--LWNQILDKGLQTDV-VMHN 584
Query: 477 VLKH 480
+L H
Sbjct: 585 ILIH 588
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 82/190 (43%), Gaps = 3/190 (1%)
Query: 294 RKVSYYNILIKEMCRRCDFKGPRDL--LVEMRQVGCEPITLTYNYVLGVLCKNGQDADAC 351
R V+ YNI++K + DL L+E + P +T++ ++ LC+ G +
Sbjct: 367 RNVTSYNIMLKGLFDGGMVDKATDLWELLE-KDDSLSPDMVTFSTMIHGLCEKGFANKSL 425
Query: 352 ELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
++LEE D +Y I C+ G+ D A + ++ +P + A I G+
Sbjct: 426 QILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGF 485
Query: 412 FIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
++ DA + A+ S + + Y+ L K + A EM++ G +V
Sbjct: 486 CQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDV 545
Query: 472 SVYRRVLKHL 481
+ Y +++ L
Sbjct: 546 NTYGSLIRGL 555
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 56/144 (38%), Gaps = 2/144 (1%)
Query: 269 VRALIEMFSVLGLYEMAKYVIKKT-ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG- 326
+R L + G + ++ K + V +NILI +C LL EM++
Sbjct: 552 IRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNN 611
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
C P +TYN ++ + G A L +L PD I+Y I C +
Sbjct: 612 CCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGV 671
Query: 387 NFFNQMVKRGLQPRLATHAAFIKG 410
N+M+ G+ P T ++
Sbjct: 672 QLLNEMLASGIIPTAITWNILVRA 695
>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Brachypodium distachyon]
Length = 814
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 101/211 (47%), Gaps = 4/211 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
++ N LI +C + KG ++L M G E +TYN ++ CK+ + +A +L +
Sbjct: 477 IATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRD 536
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M+ + PDA + I C +GK + A + QM G+QP + ++ I GY
Sbjct: 537 DMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAK 596
Query: 416 RYEDAYKYV-VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ A +Y+ L A K ++ ++Y+ L + +N N A VL M G++P Y
Sbjct: 597 DIQKANEYLNELMACGLKPNA-VIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTY 655
Query: 475 RRVLKHLHTSHQEHMAKCL--SSRYSSLSLG 503
++ + + AK + SR +S+ +G
Sbjct: 656 CSLMHWMCHAGLVDEAKTMFEQSRKNSIEVG 686
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 82/190 (43%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L+ + + I+ + V Y +I C+ D + + L E+ G +P + YN ++G
Sbjct: 567 LHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGG 626
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
+NG + A +L+ M P +TY + + C G D A F Q K ++
Sbjct: 627 YGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVG 686
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
+ + I+G + ++A Y + + + Y+ L + K+ N A +
Sbjct: 687 VVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFD 746
Query: 461 EMMKNGLRPN 470
EM+ +G+ P+
Sbjct: 747 EMVSSGIVPD 756
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 8/168 (4%)
Query: 249 GIW-RVVE---VLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKK-TERKVSYYNILI 303
GIW +++E +N + L+ G L E ++ G E+ + ++ K E YNI+I
Sbjct: 463 GIWLKMLEKGLCINIATSNALIHG---LCEGKNMKGATEVLRTMVNKGMELDNITYNIMI 519
Query: 304 KEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH 363
+ C+ + L +M + G +P +N ++ C G+ +A LL +M
Sbjct: 520 QGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQ 579
Query: 364 PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
PD ++Y I C+ A + N+++ GL+P + A I GY
Sbjct: 580 PDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGY 627
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 81/192 (42%), Gaps = 3/192 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+L+ +C+ L M + P +T+ ++ L ++ + + LL EM
Sbjct: 269 YNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREME 328
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
G P+ + I + CR G F A F++MV + ++ T+ + E
Sbjct: 329 GLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEME 388
Query: 419 DAYKYV-VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
A + + + + S + S++A L + ++SEM+K G++PN ++
Sbjct: 389 RAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTAC 448
Query: 478 LKHL--HTSHQE 487
K L HQE
Sbjct: 449 TKQLCQGRRHQE 460
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 75/175 (42%)
Query: 304 KEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH 363
K++C+ + + ++M + G T N ++ LC+ A E+L M+ +
Sbjct: 450 KQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGME 509
Query: 364 PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY 423
D ITY I I C+ K + A + M+++G +P + I Y + E+A
Sbjct: 510 LDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHL 569
Query: 424 VVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ + + Y + + K + A L+E+M GL+PN +Y ++
Sbjct: 570 LGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALI 624
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/194 (19%), Positives = 86/194 (44%), Gaps = 1/194 (0%)
Query: 286 KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL-GVLCKN 344
+ V K+ + YN++ + +C+ + + +L EM G + +N V+ G+L +
Sbjct: 361 EMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRT 420
Query: 345 GQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
G+ L+ EM+ R P+ C+ + A + +M+++GL +AT
Sbjct: 421 GRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATS 480
Query: 405 AAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMK 464
A I G + A + + +K N+ Y+++ K++ A + +M++
Sbjct: 481 NALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIR 540
Query: 465 NGLRPNVSVYRRVL 478
G +P+ ++ ++
Sbjct: 541 KGFKPDAYMFNSII 554
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 51/113 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ MC + + + R+ E + Y ++ LCK G+ +A EEM
Sbjct: 655 YCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMR 714
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
R+ P+ ITY + C+ G + A F++MV G+ P ++ + G+
Sbjct: 715 SRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTGF 767
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 5/112 (4%)
Query: 280 GLYEMAKYVIKKT-----ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
GL + AK + +++ E V Y I+I+ +C+ + EMR P +TY
Sbjct: 666 GLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITY 725
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
++ CK+G + +A +L +EM+ PD ++Y + +V D A
Sbjct: 726 TTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTGFSQVDSLDKAI 777
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 53/122 (43%), Gaps = 1/122 (0%)
Query: 288 VIKKTERKVSY-YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQ 346
+I+K + +Y +N +I C + LL +M+ G +P ++Y ++ CK
Sbjct: 538 MIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKD 597
Query: 347 DADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAA 406
A E L E++ P+A+ Y I R G A + M G+QP T+ +
Sbjct: 598 IQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCS 657
Query: 407 FI 408
+
Sbjct: 658 LM 659
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH---PDAITYEIFIVYSCRVGKFDVA 385
P T N +L L + G C++ +EM R+C P+ +Y I C+VGK D
Sbjct: 191 PSVKTCNALLEALARTGNLGATCKVFDEM--RDCKTVTPNGYSYTSMIKALCKVGKVDDG 248
Query: 386 FNFFNQMVKRGLQ 398
F + ++ GLQ
Sbjct: 249 FKILSDLIHAGLQ 261
>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 58/113 (51%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ILI +C + L EM + GC+P T TY ++ C G A ++L+EM
Sbjct: 268 YSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMA 327
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
+ C P+ TY I I CR GK + A F +M+K GL P + T A I GY
Sbjct: 328 TKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGY 380
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 3/133 (2%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L +M KY + + V + ILI+ CR + +L M+Q GC P TY ++
Sbjct: 568 LGKMMKYGLVPS---VVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIING 624
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
LC NG+ +A +L M P+ TY + + + G+ D AF + MVK G QP
Sbjct: 625 LCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPN 684
Query: 401 LATHAAFIKGYFI 413
++A + G+ +
Sbjct: 685 SHIYSALLSGFVL 697
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 77/182 (42%), Gaps = 5/182 (2%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI+ G E A V +K + + +N LI C+ LL M +
Sbjct: 341 LIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGN 400
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
C+P TYN ++ LC+ + A LL ++ PD +TY I + C+ G+ ++AF
Sbjct: 401 CKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAF 460
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
N FN M GL+P T A I G R E A + K S + ++ L H
Sbjct: 461 NIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGH 520
Query: 447 DK 448
K
Sbjct: 521 CK 522
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 101/231 (43%), Gaps = 7/231 (3%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-VSY----YNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI+ LG E A ++ +K +S + LI C+ K L M +
Sbjct: 480 ALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVEN 539
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
C T+N L L K+ + +A +L +M+ P +T+ I I CR G+ ++
Sbjct: 540 RCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALS 599
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML-YSLLAS 444
+M + G P + T+ I G R E+A + ++ S + S N Y++L
Sbjct: 600 LKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEA-ETILFSMSSFGVSPNHFTYAVLVK 658
Query: 445 LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSS 495
H K A ++S M+KNG +PN +Y +L S+ A+ LSS
Sbjct: 659 AHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSS 709
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 81/181 (44%), Gaps = 1/181 (0%)
Query: 302 LIKEMCRRCDFKGPRDLLVEM-RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGR 360
L+ CRR D + +M ++ C P ++TY+ ++ LC+ G+ +A +L +EM+ +
Sbjct: 235 LVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEK 294
Query: 361 NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
C P TY + I C +G D A ++M + P + T+ I + E+A
Sbjct: 295 GCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEA 354
Query: 421 YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKH 480
+ ++ L + + K V A +LS M K +PN+ Y +++
Sbjct: 355 NGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEG 414
Query: 481 L 481
L
Sbjct: 415 L 415
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
E+++ G P YN+++ LCK G+ +A +L ++M+ PD I I + C+
Sbjct: 731 EIKKCGV-PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSI-IEHYCKTC 788
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV 424
K+D F ++ P A++ I G R ++A K V
Sbjct: 789 KYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLV 832
>gi|224093190|ref|XP_002309826.1| predicted protein [Populus trichocarpa]
gi|222852729|gb|EEE90276.1| predicted protein [Populus trichocarpa]
Length = 1480
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERKVSY-----YNILIKEMCRRCDFKGPRDLLVEMRQV 325
A+I ++ GL A+ + E + + YN L+ R + + +++ EM ++
Sbjct: 366 AMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKI 425
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G +TYN ++ + K GQ+ A +L +M +PDA+TY + I + K A
Sbjct: 426 GFGKDEMTYNTMIHMYGKQGQNELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEA 485
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYR---YEDAYKYVVLSADKYKSSSNMLYSLL 442
++M+ G++P L T++A I GY + E+ + ++ S + ++ YS++
Sbjct: 486 AGVMSEMLNTGVKPTLKTYSALICGYAKAGKPVEAEETFDCMLRSGIR---PDHLAYSVM 542
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+H + N P A + EM+ +G+ + S+Y +L+ L
Sbjct: 543 LDIHLRFNEPKRAMTLYKEMLHDGITLDHSLYELMLRTL 581
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 73/176 (41%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI R + + + +M C+P TYN ++ V + G A +L ++
Sbjct: 329 YNTLISACSRASNLEEAAKVFDDMEAHHCQPDLWTYNAMISVYGRCGLSGKAEQLFNDLE 388
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R PDA++Y + R G + + +MVK G T+ I Y + E
Sbjct: 389 SRGFFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQNE 448
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
A + ++ + Y++L K N A V+SEM+ G++P + Y
Sbjct: 449 LALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLNTGVKPTLKTY 504
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 65/152 (42%), Gaps = 9/152 (5%)
Query: 269 VRALIEMFSVLG---LYEMAKYVIKKTE----RKVSYYNILIKEMCRRCDFKGPRDLLVE 321
R L + SVLG +A V + E V YN ++ RR F ++LL
Sbjct: 220 ARMLSTILSVLGKANQEALAVEVFMRAEPSAGNTVQVYNAMMGVYARRGRFNKVQELLDL 279
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDAD--ACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
MR+ GC+P +++N ++ K G A ELL E+ PD ITY I R
Sbjct: 280 MRERGCKPDLVSFNTLINARLKAGAMMPNLAIELLNEVRRSGLRPDTITYNTLISACSRA 339
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
+ A F+ M QP L T+ A I Y
Sbjct: 340 SNLEEAAKVFDDMEAHHCQPDLWTYNAMISVY 371
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 6/173 (3%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
+LL E+R+ G P T+TYN ++ + +A ++ ++M +C PD TY I
Sbjct: 312 ELLNEVRRSGLRPDTITYNTLISACSRASNLEEAAKVFDDMEAHHCQPDLWTYNAMISVY 371
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYK---S 433
R G A FN + RG P ++ + + + F R + K + + K
Sbjct: 372 GRCGLSGKAEQLFNDLESRGFFPDAVSYNSLL---YAFAREGNVEKVKEIWEEMVKIGFG 428
Query: 434 SSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
M Y+ + ++ K +A + +M +G P+ Y ++ L +++
Sbjct: 429 KDEMTYNTMIHMYGKQGQNELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNK 481
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 127/319 (39%), Gaps = 42/319 (13%)
Query: 194 NSDICSLVIDNCGRLDDYETMRQLLND-----------------------FNVYQVCLNE 230
N + +L++D GRLD+ + Q L D F V ++
Sbjct: 852 NGLLQALIVD--GRLDELYVVVQELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYHGM 909
Query: 231 KAFGFLPVL----ISSKALTKKGIWRVVEVL----NQVGGSCLVSGVRALIEMFSVLGLY 282
KA G+ P + + ++ L++ R VE + + G +S ++++M+ + +
Sbjct: 910 KAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIEDF 969
Query: 283 EMAKYVIKKT-----ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYV 337
V ++ E YN LI CR + L+ EMR G EP TY +
Sbjct: 970 RKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRDHRPEEGFSLMHEMRVAGLEPKLDTYKSL 1029
Query: 338 LGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
+ K A EL EE+ + C D Y + G A F+ M G+
Sbjct: 1030 VASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTMMKIYRNSGSHSKAERLFSMMKDAGV 1089
Query: 398 QPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSS--SNMLYSLLASLHDKNNNPVMA 455
+P +AT + Y + ++A K VLS K S S + YS + + +N + +
Sbjct: 1090 EPTIATMHLLMVSYGSSGQPQEAEK--VLSNLKETGSNLSTLPYSSVIDAYLRNGDYNIG 1147
Query: 456 KNVLSEMMKNGLRPNVSVY 474
L +M K GL P+ ++
Sbjct: 1148 IQKLIQMKKEGLEPDHRIW 1166
Score = 38.9 bits (89), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 63/156 (40%), Gaps = 5/156 (3%)
Query: 270 RALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQ 324
++L+ F L E A+ + ++ + K S+Y+ ++K L M+
Sbjct: 1027 KSLVASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTMMKIYRNSGSHSKAERLFSMMKD 1086
Query: 325 VGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
G EP T + ++ +GQ +A ++L + + + Y I R G +++
Sbjct: 1087 AGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETGSNLSTLPYSSVIDAYLRNGDYNI 1146
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
QM K GL+P FI+ + R +A
Sbjct: 1147 GIQKLIQMKKEGLEPDHRIWTCFIRAASLSRRTSEA 1182
>gi|356509257|ref|XP_003523367.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49240-like [Glycine max]
Length = 631
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 84/179 (46%)
Query: 289 IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
+K+ + +N+++ C F+ ++ +M + C P TL++N ++ LC NG+
Sbjct: 338 LKRLSVNLGSFNVIVDGYCDEGRFEEAMEVFRKMGEYRCSPDTLSFNNLIDRLCDNGRIV 397
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
+A E+ EM G+ PD TY + + R + D A +F +MV GL+P LA + +
Sbjct: 398 EAEEVYGEMEGKGVSPDEFTYGLLMDACFRENRADDAAAYFRKMVDSGLRPNLAVYNRLV 457
Query: 409 KGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
G + ++A + L K K ++ L D+ M K V + + NG+
Sbjct: 458 GGLVKVGKIDEAKGFFELMVKKLKMDVTSYQFIMKVLSDEGRLDEMLKIVDTLLDDNGV 516
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 94/245 (38%), Gaps = 48/245 (19%)
Query: 249 GIWRVVEVLNQVGGSCLVSGV--RALIEMFSVLGLYEMA----KYVIKKTERKVSYYNIL 302
I R+ E L + G + G+ L++ + V G+ + A + + K + YN +
Sbjct: 252 AILRLYEELRERLGGVVQDGIVFGCLMKGYFVKGMEKEAMECYEEALGKKKMSAVGYNSV 311
Query: 303 IKEMCRRCDFKGPRDLLVEMRQVGCEPITL------TYNYVLGVLCKNGQDADACELLEE 356
+ + + F L M + EP+ ++N ++ C G+ +A E+ +
Sbjct: 312 LDALSKNGRFDEALRLFDRMMKE-HEPLKRLSVNLGSFNVIVDGYCDEGRFEEAMEVFRK 370
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
M C PD +++ I C G+ A + +M +G+ P T+ + F R
Sbjct: 371 MGEYRCSPDTLSFNNLIDRLCDNGRIVEAEEVYGEMEGKGVSPDEFTYGLLMDACFRENR 430
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
+DA Y +M+ +GLRPN++VY R
Sbjct: 431 ADDAAAY-----------------------------------FRKMVDSGLRPNLAVYNR 455
Query: 477 VLKHL 481
++ L
Sbjct: 456 LVGGL 460
>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
Length = 814
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 100/224 (44%), Gaps = 20/224 (8%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
LI +C+ +L + G T T N +L LC+ G+ +A + +E+LGR
Sbjct: 465 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 524
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
C D ++Y I C K D AF F ++MVKRGL+P T++ I G F + E+A
Sbjct: 525 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAI 584
Query: 422 KYVVLSADKYKSSSNM----LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
++ D K + + YS++ K + EMM ++PN VY +
Sbjct: 585 QF----WDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 640
Query: 478 LKHLHTSHQEHMAKCL------------SSRYSSLSLGSSVEAR 509
++ S + MA L S+ Y+SL G S+ +R
Sbjct: 641 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 684
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 85/183 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+++I C+ + ++ EM +P T+ YN+++ C++G+ + A EL E
Sbjct: 599 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 658
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M + P++ TY I + + + A F +M GL+P + + A I GY
Sbjct: 659 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 718
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ + K + + Y+++ + ++ N A +L+EM + G+ P+ Y+
Sbjct: 719 QMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYK 778
Query: 476 RVL 478
+
Sbjct: 779 EFI 781
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 51/114 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LIK M + + L EMR G EP Y ++ K GQ LL EM
Sbjct: 672 YTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMH 731
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+N HP+ ITY + I R G A N+M ++G+ P T+ FI GY
Sbjct: 732 SKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYL 785
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 83/194 (42%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N L+ +C + E+ GC ++YN ++ C + +A L+EM+
Sbjct: 498 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 557
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
R PD TY I I + K + A F++ + G+ P + T++ I G R E+
Sbjct: 558 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 617
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
++ K + ++Y+ L + ++ MA + +M G+ PN + Y ++K
Sbjct: 618 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 677
Query: 480 HLHTSHQEHMAKCL 493
+ + AK L
Sbjct: 678 GMSIISRVEEAKLL 691
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 126/332 (37%), Gaps = 29/332 (8%)
Query: 152 LSMSVSLSNASVIEILRVLNSEKVSALCFLKYMREIMPEFYKNSDICSLVIDNCGRLDDY 211
L + +L +A+ + ++R++N C L+ R + + + +C D
Sbjct: 124 LLLDANLLSAARVVLIRLINGNVPVLPCGLRDSRVAIADAMASLSLC---------FD-- 172
Query: 212 ETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRA 271
E +R+ ++D + C K G L L KG++ N + L S VRA
Sbjct: 173 EEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNIL----LTSLVRA 228
Query: 272 -----LIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
E F V V K V + I C+ + L +M + G
Sbjct: 229 NEFQKCCEAFDV---------VCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAG 279
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
P +T+N V+ L G+ +A E+M+ R P ITY I + R + A+
Sbjct: 280 VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAY 339
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
+M K+G P + + I + A + L K S ++ Y+ L +
Sbjct: 340 FVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGY 399
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
KN A+ +L EM+ G N + V+
Sbjct: 400 CKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 431
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 77/195 (39%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI C + L EM + G +P TY+ ++ L + +A + ++
Sbjct: 532 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK 591
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD TY + I C+ + + FF++M+ + +QP + I+ Y R
Sbjct: 592 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 651
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + K S ++ Y+ L + AK + EM GL PNV Y ++
Sbjct: 652 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 711
Query: 479 KHLHTSHQEHMAKCL 493
Q +CL
Sbjct: 712 DGYGKLGQMVKVECL 726
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 90/233 (38%), Gaps = 9/233 (3%)
Query: 243 KALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKT-ERKVSYYNI 301
K +TKKG V V N + + + IE S+ E+ ++ K S YN
Sbjct: 343 KEMTKKGFPPNVIVYNNL--------IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 394
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
LIK C+ LL EM +G ++ V+ +LC + A + EML RN
Sbjct: 395 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 454
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
P I C+ GK A + Q + +G T A + G + ++A+
Sbjct: 455 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 514
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + + Y+ L S A L EM+K GL+P+ Y
Sbjct: 515 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 567
>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 100/224 (44%), Gaps = 20/224 (8%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
LI +C+ +L + G T T N +L LC+ G+ +A + +E+LGR
Sbjct: 476 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 535
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
C D ++Y I C K D AF F ++MVKRGL+P T++ I G F + E+A
Sbjct: 536 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAI 595
Query: 422 KYVVLSADKYKSSSNM----LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
++ D K + + YS++ K + EMM ++PN VY +
Sbjct: 596 QF----WDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 651
Query: 478 LKHLHTSHQEHMAKCL------------SSRYSSLSLGSSVEAR 509
++ S + MA L S+ Y+SL G S+ +R
Sbjct: 652 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 695
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 85/183 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+++I C+ + ++ EM +P T+ YN+++ C++G+ + A EL E
Sbjct: 610 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 669
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M + P++ TY I + + + A F +M GL+P + + A I GY
Sbjct: 670 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 729
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ + K + + Y+++ + ++ N A +L+EM + G+ P+ Y+
Sbjct: 730 QMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYK 789
Query: 476 RVL 478
+
Sbjct: 790 EFI 792
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 51/114 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LIK M + + L EMR G EP Y ++ K GQ LL EM
Sbjct: 683 YTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMH 742
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+N HP+ ITY + I R G A N+M ++G+ P T+ FI GY
Sbjct: 743 SKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYL 796
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 83/194 (42%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N L+ +C + E+ GC ++YN ++ C + +A L+EM+
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
R PD TY I I + K + A F++ + G+ P + T++ I G R E+
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
++ K + ++Y+ L + ++ MA + +M G+ PN + Y ++K
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 480 HLHTSHQEHMAKCL 493
+ + AK L
Sbjct: 689 GMSIISRVEEAKLL 702
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 126/332 (37%), Gaps = 29/332 (8%)
Query: 152 LSMSVSLSNASVIEILRVLNSEKVSALCFLKYMREIMPEFYKNSDICSLVIDNCGRLDDY 211
L + +L +A+ + ++R++N C L+ R + + + +C D
Sbjct: 135 LLLDANLLSAARVVLIRLINGNVPVLPCGLRDSRVAIADAMASLSLC---------FD-- 183
Query: 212 ETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRA 271
E +R+ ++D + C K G L L KG++ N + L S VRA
Sbjct: 184 EEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNIL----LTSLVRA 239
Query: 272 -----LIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
E F V V K V + I C+ + L +M + G
Sbjct: 240 NEFQKCCEAFDV---------VCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAG 290
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
P +T+N V+ L G+ +A E+M+ R P ITY I + R + A+
Sbjct: 291 VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAY 350
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
+M K+G P + + I + A + L K S ++ Y+ L +
Sbjct: 351 FVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGY 410
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
KN A+ +L EM+ G N + V+
Sbjct: 411 CKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 442
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 77/195 (39%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI C + L EM + G +P TY+ ++ L + +A + ++
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK 602
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD TY + I C+ + + FF++M+ + +QP + I+ Y R
Sbjct: 603 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + K S ++ Y+ L + AK + EM GL PNV Y ++
Sbjct: 663 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 722
Query: 479 KHLHTSHQEHMAKCL 493
Q +CL
Sbjct: 723 DGYGKLGQMVKVECL 737
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 90/233 (38%), Gaps = 9/233 (3%)
Query: 243 KALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKT-ERKVSYYNI 301
K +TKKG V V N + + + IE S+ E+ ++ K S YN
Sbjct: 354 KEMTKKGFPPNVIVYNNL--------IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 405
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
LIK C+ LL EM +G ++ V+ +LC + A + EML RN
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
P I C+ GK A + Q + +G T A + G + ++A+
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 525
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + + Y+ L S A L EM+K GL+P+ Y
Sbjct: 526 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 578
Score = 38.5 bits (88), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 70/194 (36%), Gaps = 40/194 (20%)
Query: 257 LNQVGGSCLVSGVRALIEMFSVLGLYEMA-----KYVIKKTERKVSYYNILIKEMCRRCD 311
+ + G + V +I+ + G Y+ A K V + E + Y+IL+K + R
Sbjct: 286 MEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKR 345
Query: 312 FKGPRDLLVEMRQVGCEPITL-----------------------------------TYNY 336
+L EM + G P + TYN
Sbjct: 346 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 405
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
++ CKNGQ +A LL+EML + + ++ I C FD A F +M+ R
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465
Query: 397 LQPRLATHAAFIKG 410
+ P I G
Sbjct: 466 MSPGGGLLTTLISG 479
>gi|410109955|gb|AFV61057.1| pentatricopeptide repeat-containing protein 11, partial [Phyla
nodiflora]
Length = 431
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 86/183 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ L EM + G P ++T+ ++ CKNG A E+ +
Sbjct: 212 VYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTFTTLIDGHCKNGWVDLAMEIYK 271
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD +TY I C+ G A + ++M GL+P T+ I G
Sbjct: 272 QMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDKITYTTLIDGCCKEG 331
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ A+++ + + ++ Y+ L S + V A+ +L EM+ GL+P+ Y
Sbjct: 332 DLDTAFEHRKMMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTRTYT 391
Query: 476 RVL 478
++
Sbjct: 392 MII 394
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 83/188 (44%), Gaps = 14/188 (7%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ C+ D + + + + + G P ++YN ++ + G + L M
Sbjct: 144 FFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAM 203
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
HPD TY + I C+ K D A F++M+++GL P T I G+
Sbjct: 204 HASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTFTTLIDGHC----- 258
Query: 418 EDAYKYVVLSADKYKS--SSNML-----YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
+V L+ + YK S ++L Y+ L K + A +++ EM GL+P+
Sbjct: 259 --KNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPD 316
Query: 471 VSVYRRVL 478
Y ++
Sbjct: 317 KITYTTLI 324
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI +C+ +L EM VG +P T TY ++ CK G +LL+EM
Sbjct: 355 YTALISGLCQEGRSVDAEKMLREMLSVGLKPDTRTYTMIINEFCKKGDVWKGSKLLKEM- 413
Query: 359 GRNCH-PDAITYEIFI 373
R+ H P +TY + +
Sbjct: 414 QRDGHVPSVVTYNVLM 429
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 79/176 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI + + + L +M+ GC P TYN L L K+G+ + +L EEML
Sbjct: 791 YNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEML 850
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R C P+ IT+ I I + D A + + ++ P T+ I G R E
Sbjct: 851 FRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLE 910
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+A ++ D + LY++L + K + A + M+K G+RP++ Y
Sbjct: 911 EAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSY 966
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 77/177 (43%), Gaps = 2/177 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADAC-ELL 354
V Y +LI +C ++L ++M+ +P +TY +L +G D DA E
Sbjct: 297 VVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHG-DLDAIKEFW 355
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
EM PD +T+ I I C+VGK D AF + M K+G+ P L T+ I G
Sbjct: 356 SEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRL 415
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
R ++A + ++ Y L + K+ A +M NG+ PN+
Sbjct: 416 NRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNI 472
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 79/179 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNIL+ ++ D + +L M + G P +Y+ ++ LC G+ DA EE+
Sbjct: 931 YNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELK 990
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD + Y + I R + + A + F++M RG+ P L T+ A I I E
Sbjct: 991 LSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVE 1050
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+A K K + Y+ L H + NP A V +MM G RPN + ++
Sbjct: 1051 EAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 78/187 (41%), Gaps = 12/187 (6%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI + + + + EM GC P YN ++ K G ACEL M+
Sbjct: 896 YGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMV 955
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD +Y I + C VGK D A ++F ++ GL P L + I G R E
Sbjct: 956 KEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVE 1015
Query: 419 DAYKYV------VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
+A ++ D Y ++ +L +A + ++ A + E+ GL PNV
Sbjct: 1016 EALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEE------AGKMYEELQLKGLEPNVF 1069
Query: 473 VYRRVLK 479
Y +++
Sbjct: 1070 TYNALIR 1076
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 1/127 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN L+ + + + L M C P T+++N +L LCKNG+ A ++L
Sbjct: 577 VVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLF 636
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M NC PD +TY I + + + AF F+QM K+ + P T + G
Sbjct: 637 RMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQM-KKVIYPDYVTLCTLLPGVIKDG 695
Query: 416 RYEDAYK 422
R EDA++
Sbjct: 696 RIEDAFR 702
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 90/209 (43%), Gaps = 4/209 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ L+ + +R D + LL EM +G P T+ + +L + G+ +A +L+ M
Sbjct: 230 YSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMD 289
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C PD +TY + I C GK + A F +M +P T+ + F +
Sbjct: 290 DAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLD-KFSDHGDL 348
Query: 419 DAYK--YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
DA K + + AD Y + +++L K A L M K G+ PN+ Y
Sbjct: 349 DAIKEFWSEMEADGYLPDV-VTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNT 407
Query: 477 VLKHLHTSHQEHMAKCLSSRYSSLSLGSS 505
++ L ++ A L + SL L ++
Sbjct: 408 LICGLLRLNRLDEALELFNSMESLGLETT 436
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 81/186 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+NI+I + + DL ++ P TY ++ L K G+ +A + EEML
Sbjct: 861 HNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEML 920
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C P+ Y I + + G + A F +MVK G++P L +++ + + + +
Sbjct: 921 DYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVD 980
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA Y + Y+L+ + ++ A ++ EM G+ P++ Y ++
Sbjct: 981 DALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALI 1040
Query: 479 KHLHTS 484
+L +
Sbjct: 1041 LNLGIA 1046
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 86/211 (40%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V + ILI +C+ L M++ G P TYN ++ L + + +A EL
Sbjct: 367 VVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFN 426
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M A TY +FI Y + G+ A F +M G+ P + A +
Sbjct: 427 SMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQG 486
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R E+A ++ + + Y++L + K A +LSEM +NG P V +
Sbjct: 487 RLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIIN 546
Query: 476 RVLKHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
++ L+ + + A + R + L +V
Sbjct: 547 SLIDTLYKADRVDEAWKMFQRMKEMKLAPTV 577
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 2/161 (1%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
+++ G P +TYN ++ K G+ DA +LL EM C P+ + I + +
Sbjct: 498 LKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADR 557
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSNMLYS 440
D A+ F +M + L P + T+ + G R ++A + + AD ++ +
Sbjct: 558 VDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNT 617
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
LL L KN +A +L M + P+V Y V+ L
Sbjct: 618 LLDCLC-KNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGL 657
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 71/176 (40%), Gaps = 5/176 (2%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGC-EPITLTYNYVLGVLCKNGQDADACELLEEMLGR 360
L+K +C+ ++ +++ + C P YN ++ L K A L +M
Sbjct: 758 LVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNA 817
Query: 361 NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
C PD TY +F+ + GK F+ + +M+ RG +P TH I G + A
Sbjct: 818 GCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKA 877
Query: 421 YK--YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
Y ++S D S + Y L K AK EM+ G PN +Y
Sbjct: 878 IDLYYDLMSGD--FSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLY 931
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 77/196 (39%), Gaps = 2/196 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI + R +L M +G E TY + K+G+ A + E+M
Sbjct: 405 YNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMK 464
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ + + G+ + A FFN + K GL P T+ ++ Y R +
Sbjct: 465 TNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVD 524
Query: 419 DAYKYVV-LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
DA K + + + ++ SL+ +L+ K + A + M + L P V Y +
Sbjct: 525 DAIKLLSEMEENGCDPEVVIINSLIDTLY-KADRVDEAWKMFQRMKEMKLAPTVVTYNTL 583
Query: 478 LKHLHTSHQEHMAKCL 493
L L + A L
Sbjct: 584 LAGLGKEGRVQEATAL 599
Score = 41.6 bits (96), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 69/170 (40%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M+ G P + N L L + G+ +A E + PDAITY I + + G
Sbjct: 462 KMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAG 521
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+ D A ++M + G P + + I + R ++A+K + + + + Y+
Sbjct: 522 RVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYN 581
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
L + K A + M+ + PN + +L L + + +A
Sbjct: 582 TLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLA 631
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 102/236 (43%), Gaps = 5/236 (2%)
Query: 248 KGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTE-----RKVSYYNIL 302
K W V E + ++ + +I + G ++ AK I E V YN +
Sbjct: 199 KMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTV 258
Query: 303 IKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNC 362
I C R F+ + M+ +P TYN + LCK + +A +L ++L
Sbjct: 259 INGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGL 318
Query: 363 HPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
P+A+TY I C G D AF + ++M+ RG+ + T+ I F+ R E+A
Sbjct: 319 VPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAED 378
Query: 423 YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ +K + Y++ + + + N A ++ EM++ +RP V Y ++
Sbjct: 379 MIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLI 434
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 2/208 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN+LI + + D++ EMR+ G EP +TYN + C+ G A L +
Sbjct: 357 VFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFD 416
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM+ +N P TY I + + A F + +K G+ P + A I G+ +
Sbjct: 417 EMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNG 476
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ A++ + + + ++ L + + AK +L EM + G++P+ Y
Sbjct: 477 NIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYN 536
Query: 476 RVLKHLHTSHQEHMAKCLSSRYSSLSLG 503
++ S + M L LSLG
Sbjct: 537 TLISGY--SKRGDMKDALEVFDEMLSLG 562
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 102/243 (41%), Gaps = 9/243 (3%)
Query: 243 KALTKKGIWRVVEVLN-QVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNI 301
K + +KG+ V N Q+ G C + + +F EM + I+ T V Y
Sbjct: 381 KEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFD-----EMVEKNIRPT---VETYTS 432
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
LI +R + + + G P + +N ++ C NG A +LL+EM
Sbjct: 433 LIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAK 492
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
PD +T+ + CR K + A ++M +RG++P ++ I GY +DA
Sbjct: 493 VVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDAL 552
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + + Y+ L + K A+ +L EM G+ P+ S Y V++ +
Sbjct: 553 EVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAM 612
Query: 482 HTS 484
T+
Sbjct: 613 KTN 615
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 85/211 (40%), Gaps = 4/211 (1%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K E V YNI I CR + K L EM + P TY ++ V K + ++
Sbjct: 386 KGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSE 445
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A E ++ + PD I + I C G D AF +M + P T ++
Sbjct: 446 AEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQ 505
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
GY + E+A K + ++ ++ Y+ L S + K + A V EM+ G P
Sbjct: 506 GYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDP 565
Query: 470 NVSVYRRVLKHL----HTSHQEHMAKCLSSR 496
+ Y +++ H E + + + S+
Sbjct: 566 TLLTYNALIQGYSKIGEADHAEELLREMQSK 596
>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Vitis vinifera]
Length = 876
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 58/113 (51%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ILI +C + L EM + GC+P T TY ++ C G A ++L+EM
Sbjct: 245 YSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMA 304
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
+ C P+ TY I I CR GK + A F +M+K GL P + T A I GY
Sbjct: 305 TKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGY 357
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 3/133 (2%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L +M KY + + V + ILI+ CR + +L M+Q GC P TY ++
Sbjct: 545 LGKMMKYGLVPS---VVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIING 601
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
LC NG+ +A +L M P+ TY + + + G+ D AF + MVK G QP
Sbjct: 602 LCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPN 661
Query: 401 LATHAAFIKGYFI 413
++A + G+ +
Sbjct: 662 SHIYSALLSGFVL 674
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 77/182 (42%), Gaps = 5/182 (2%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI+ G E A V +K + + +N LI C+ LL M +
Sbjct: 318 LIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGN 377
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
C+P TYN ++ LC+ + A LL ++ PD +TY I + C+ G+ ++AF
Sbjct: 378 CKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAF 437
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
N FN M GL+P T A I G R E A + K S + ++ L H
Sbjct: 438 NIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGH 497
Query: 447 DK 448
K
Sbjct: 498 CK 499
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 101/231 (43%), Gaps = 7/231 (3%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-VSY----YNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI+ LG E A ++ +K +S + LI C+ K L M +
Sbjct: 457 ALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVEN 516
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
C T+N L L K+ + +A +L +M+ P +T+ I I CR G+ ++
Sbjct: 517 RCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALS 576
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML-YSLLAS 444
+M + G P + T+ I G R E+A + ++ S + S N Y++L
Sbjct: 577 LKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEA-ETILFSMSSFGVSPNHFTYAVLVK 635
Query: 445 LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSS 495
H K A ++S M+KNG +PN +Y +L S+ A+ LSS
Sbjct: 636 AHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSS 686
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 81/181 (44%), Gaps = 1/181 (0%)
Query: 302 LIKEMCRRCDFKGPRDLLVEM-RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGR 360
L+ CRR D + +M ++ C P ++TY+ ++ LC+ G+ +A +L +EM+ +
Sbjct: 212 LVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEK 271
Query: 361 NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
C P TY + I C +G D A ++M + P + T+ I + E+A
Sbjct: 272 GCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEA 331
Query: 421 YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKH 480
+ ++ L + + K V A +LS M K +PN+ Y +++
Sbjct: 332 NGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEG 391
Query: 481 L 481
L
Sbjct: 392 L 392
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
E+++ G P YN+++ LCK G+ +A +L ++M+ PD I I + C+
Sbjct: 724 EIKKCGV-PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSI-IEHYCKTC 781
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV 424
K+D F ++ P A++ I G R ++A K V
Sbjct: 782 KYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLV 825
>gi|357121428|ref|XP_003562422.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Brachypodium distachyon]
Length = 663
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 87/182 (47%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ I +C+ + ++LLV+M ++GC P N + LCK + DA +++E+M
Sbjct: 231 YSRWISALCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYYLCKQNRLPDALQMVEKMR 290
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD +TY+ + C KF A + +MVKR L+P + + A I G + +
Sbjct: 291 TKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKVD 350
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A++ S +Y+ L S + + A ++S M NG P++ Y +L
Sbjct: 351 EAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNILL 410
Query: 479 KH 480
H
Sbjct: 411 NH 412
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 6/190 (3%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
NILI C+ K +L EM G + +TY ++ L G A EL E+ML
Sbjct: 477 NILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLN 536
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR--- 416
P+ Y I + + C+VG F A F+ M+++ + P T I Y++ R
Sbjct: 537 AQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLI--YWLGKRSRA 594
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
E + + + + L++ L D+ + +A V MM+NG+ + V R
Sbjct: 595 IEALNLFKDMRTRGVEPDTLTFKYLISGLLDEGKS-TLAYEVWEYMMENGIILDREVSER 653
Query: 477 VLKHLHTSHQ 486
++ L + ++
Sbjct: 654 LISVLKSKNK 663
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 65/128 (50%), Gaps = 6/128 (4%)
Query: 275 MFSVLGLYEMAKYVIKK-----TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEP 329
+FSV G Y +A+ + ++ + V+ YNI++ +C+ FK + + M Q P
Sbjct: 518 LFSV-GYYNLAEELFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSP 576
Query: 330 ITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFF 389
T+T+N ++ L K + +A L ++M R PD +T++ I GK +A+ +
Sbjct: 577 DTVTFNTLIYWLGKRSRAIEALNLFKDMRTRGVEPDTLTFKYLISGLLDEGKSTLAYEVW 636
Query: 390 NQMVKRGL 397
M++ G+
Sbjct: 637 EYMMENGI 644
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 19/210 (9%)
Query: 282 YEMAKYVIK-KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
+E+A ++ E V YN LI R ++ MR GCEP +TYN +L
Sbjct: 353 FELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNILLNH 412
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFF-NQMVKRGLQP 399
C G A +L+ +M +PD +Y + C+ + D AF F + M G
Sbjct: 413 YCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCD 472
Query: 400 RLATHA---AF-----IKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNN 451
++ + AF +K ++ E YK + A Y + N L+S+
Sbjct: 473 TVSCNILIDAFCKTKKVKSALELFK-EMGYKGMQADAVTYGTLINGLFSV--------GY 523
Query: 452 PVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+A+ + +M+ + PNV++Y +L HL
Sbjct: 524 YNLAEELFEQMLNAQIDPNVNLYNIMLHHL 553
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 45/229 (19%), Positives = 92/229 (40%), Gaps = 2/229 (0%)
Query: 265 LVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQ 324
+VSG+ + +GL+E + V + + V LI +C+ +L M
Sbjct: 304 VVSGLCDNKKFAEAIGLWE--EMVKRDLKPDVFSCGALIFGLCKNNKVDEAFELASRMLT 361
Query: 325 VGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
+ E YN ++ + G A +++ M C PD +TY I + + C +G +
Sbjct: 362 LDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEK 421
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLAS 444
A +M G+ P ++ +KG ++ + A+ +V + + ++L
Sbjct: 422 AEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILID 481
Query: 445 LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
K A + EM G++ + Y ++ L + ++A+ L
Sbjct: 482 AFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEEL 530
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 54/145 (37%)
Query: 280 GLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
L + K K T V Y ++ +C F L EM + +P + ++
Sbjct: 282 ALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIF 341
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
LCKN + +A EL ML + Y I R G D A+ + M G +P
Sbjct: 342 GLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEP 401
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYV 424
+ T+ + Y E A K +
Sbjct: 402 DIVTYNILLNHYCTIGMMEKAEKLI 426
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 82/211 (38%), Gaps = 2/211 (0%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
S Y IL+ R F + EM GC + YN +GVL KN D E +
Sbjct: 159 SLYRILLSGYVRAGKFDSVIETFDEMVMSGCREFGVDYNRYIGVLVKNCC-FDLVEKYYD 217
Query: 357 M-LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M L + TY +I C+ + ++ M K G P + +I
Sbjct: 218 MALAKGFCLTPFTYSRWISALCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYYLCKQN 277
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R DA + V K S + Y + S N A + EM+K L+P+V
Sbjct: 278 RLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCG 337
Query: 476 RVLKHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
++ L +++ A L+SR +L + SV
Sbjct: 338 ALIFGLCKNNKVDEAFELASRMLTLDIELSV 368
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 104/224 (46%), Gaps = 7/224 (3%)
Query: 258 NQVGGSCLVSGVRALIEMFSVLGL---YEMAKYVIKKTERKVSYYNILIKEMCRRCDFKG 314
NQ+ +V G+ + + S L L E ++I V YN +I + +
Sbjct: 216 NQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPN----VVIYNTIIDGLWKDGRHSD 271
Query: 315 PRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIV 374
+L +EM++ P +TYN ++ C +G+ +DA +LL+EML R +PD +T+ I
Sbjct: 272 AHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALIN 331
Query: 375 YSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSS 434
+ GKF A +++M+ R + P T+++ I G+ R + A L+ K S
Sbjct: 332 AFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSP 391
Query: 435 SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ ++ L + + + +L EM + GL N Y ++
Sbjct: 392 DIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLI 435
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 3/153 (1%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEM---AKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDL 318
G C ++ +EMF + +M A E V YNILI + F +L
Sbjct: 472 GLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEEL 531
Query: 319 LVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCR 378
EM G P T+TY+ ++ LCK + +A ++ + M ++ PD +T+ I C+
Sbjct: 532 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCK 591
Query: 379 VGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
G D F +M +RG+ T+ I G+
Sbjct: 592 AGMVDDGLELFCEMGQRGIVADAITYITLIYGF 624
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 75/187 (40%), Gaps = 11/187 (5%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI C+ D +DLL EM G P +T N +L LC NG+ DA E+ + M
Sbjct: 431 YTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQ 490
Query: 359 G-----------RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAF 407
PD TY I I GKF A + +M RG+ P T+++
Sbjct: 491 KSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 550
Query: 408 IKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
I G R ++A + K S + ++ L + + K + EM + G+
Sbjct: 551 IDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGI 610
Query: 468 RPNVSVY 474
+ Y
Sbjct: 611 VADAITY 617
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 82/184 (44%), Gaps = 5/184 (2%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +N L+ +C DL +M C+P +T+ ++ LC+ G+ +A LL+
Sbjct: 151 VVTFNTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLD 206
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG-LQPRLATHAAFIKGYFIF 414
ML P+ ITY + C++G A N +M + + P + + I G +
Sbjct: 207 RMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKD 266
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
R+ DA+ + +K + Y+ + + + A+ +L EM++ + P+V +
Sbjct: 267 GRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTF 326
Query: 475 RRVL 478
++
Sbjct: 327 SALI 330
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 85/210 (40%), Gaps = 31/210 (14%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ IL+K C ++ ++G P +T+N +L LC + ++A +L +M
Sbjct: 119 FTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM- 177
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY------- 411
C P+ +T+ + CR G+ A ++M++ GLQP T+ + G
Sbjct: 178 ---CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTV 234
Query: 412 --FIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
R + +++ + Y + + L+ K+ A N+ EM + + P
Sbjct: 235 SALNLLRKMEEVSHIIPNVVIYNTIIDGLW--------KDGRHSDAHNLFIEMQEKEIFP 286
Query: 470 NVSVYRRVLKHLHTSHQEHMAKCLSSRYSS 499
++ Y ++ C+S R+S
Sbjct: 287 DIVTYNCMINGF----------CISGRWSD 306
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 53/124 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ +I C++ + GC P +T+N ++ C+ + D +LL EM
Sbjct: 361 YSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMT 420
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ ITY I C+VG + A + +M+ G+ P + T + G + +
Sbjct: 421 EAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLK 480
Query: 419 DAYK 422
DA +
Sbjct: 481 DALE 484
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 5/145 (3%)
Query: 272 LIEMFSVLGLYEMAKYVIKKT-ERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
+I F + G + A+ ++++ ERK++ ++ LI + F +L EM
Sbjct: 294 MINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRS 353
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
P T+TY+ ++ CK + A + + C PD IT+ I CR + D
Sbjct: 354 IIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGI 413
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGY 411
++M + GL T+ I G+
Sbjct: 414 KLLHEMTEAGLVANTITYTTLIHGF 438
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 93/199 (46%), Gaps = 2/199 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++ +CR + M G P + YN +L L K G+ +A +L ++++
Sbjct: 187 YNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVI 246
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD +TY ++ R D A F +MV G P AT++ + G+ + +
Sbjct: 247 AKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVD 306
Query: 419 DAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
DA+K V+ K + +++ Y++L K N A + S M+ NG P++ Y V
Sbjct: 307 DAHK-VLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVV 365
Query: 478 LKHLHTSHQEHMAKCLSSR 496
L L +++ H A+ L R
Sbjct: 366 LNGLCKTNKVHDARVLFDR 384
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 101/243 (41%), Gaps = 14/243 (5%)
Query: 243 KALTKKGIW-RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNI 301
K + +KG VV + G C V +EM K + + YN
Sbjct: 102 KTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEML-------FHKMIERGCSANTVAYNA 154
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
LI +C+ + + LL EM G P +TYN +L LC+ G+ ++A + + M R
Sbjct: 155 LINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRG 214
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI---FYRYE 418
PD + Y + + GK D A F ++ +G P T+ + + G E
Sbjct: 215 YSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAE 274
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ +K +V S + + YS++ S H + A VL EM K G P+V Y +L
Sbjct: 275 EMFKKMVASG---CAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILL 331
Query: 479 KHL 481
L
Sbjct: 332 DGL 334
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 99/244 (40%), Gaps = 46/244 (18%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E + YN L+ C+ K +L M + G EP +TY+ ++ LCK G+ +A E
Sbjct: 75 EPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALE 134
Query: 353 ------------------------------------LLEEMLGRNCHPDAITYEIFIVYS 376
LLEEM + PD ITY +
Sbjct: 135 MLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGL 194
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSS 435
CR+GK A FF+ M RG P + + + + + ++A K + + A Y +
Sbjct: 195 CRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDT 254
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL------KHLHTSHQ--E 487
S+L L K+N A+ + +M+ +G PN + Y VL K + +H+ E
Sbjct: 255 VTYNSILLGLARKSNMD-EAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLE 313
Query: 488 HMAK 491
M+K
Sbjct: 314 EMSK 317
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 54/115 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YNIL+ +C+ +L M GC P ++Y+ VL LCK + DA L +
Sbjct: 324 VVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFD 383
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
M+ R PD +T+ I + C+ GK D A + +QM G P + + G
Sbjct: 384 RMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNG 438
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+I++ CR +L EM ++G P +TYN +L LCK A EL M+
Sbjct: 292 YSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMV 351
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
C PD ++Y + + C+ K A F++M++R L P + T + G
Sbjct: 352 DNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDG 403
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 84/196 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++ + R+ + ++ +M GC P TY+ VL C+ + DA ++LEEM
Sbjct: 257 YNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMS 316
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD +TY I + C+ D A F+ MV G P + +++ + G +
Sbjct: 317 KIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVH 376
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA ++ + +++L K AK++L +M +G P+ Y ++
Sbjct: 377 DARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLM 436
Query: 479 KHLHTSHQEHMAKCLS 494
L + A L+
Sbjct: 437 NGLRKQGRHIQADRLT 452
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 79/184 (42%), Gaps = 1/184 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ +++K C++ + L +M G P + YN ++ K G+ +A L EEM+
Sbjct: 11 FRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMV 70
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P TY + C+ K A F M ++G +P + T++ I G +
Sbjct: 71 SVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVT 130
Query: 419 DAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+A + + + S+N + Y+ L + K+ N A +L EM G P+ Y +
Sbjct: 131 EALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTI 190
Query: 478 LKHL 481
L L
Sbjct: 191 LSGL 194
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 3/161 (1%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
MR+ C P T+ VL CK G+ D +L E+ML PD I Y I I + G+
Sbjct: 1 MRE--CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGR 58
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
D A + +MV GL+P + T+ + + + + ++A + A+K + YS
Sbjct: 59 VDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYST 118
Query: 442 LASLHDKNNNPVMAKNVL-SEMMKNGLRPNVSVYRRVLKHL 481
+ S K A +L +M++ G N Y ++ L
Sbjct: 119 IISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGL 159
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 84/198 (42%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN L+ + + L ++ G P T+TYN +L L + +A E+ +
Sbjct: 219 VVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFK 278
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M+ C P+ TY I + CR K D A +M K G P + T+ + G
Sbjct: 279 KMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTN 338
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ A++ D + + YS++ + K N A+ + M++ L P+V +
Sbjct: 339 LVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFN 398
Query: 476 RVLKHLHTSHQEHMAKCL 493
++ L + + AK L
Sbjct: 399 ILMDGLCKAGKLDEAKDL 416
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 46/99 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y++++ +C+ R L M + P +T+N ++ LCK G+ +A +LL++M
Sbjct: 362 YSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMT 421
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
C PD + Y + + G+ A M ++G
Sbjct: 422 CSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGF 460
>gi|225466900|ref|XP_002264269.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36240-like [Vitis vinifera]
Length = 588
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 136/335 (40%), Gaps = 61/335 (18%)
Query: 206 GRLDD----YETMRQLLND---FNVYQVCLNEKAFGFLPVLISSKALT------KKGIWR 252
GRL+D +E+MR++++ +Y + +N G++ K +T K +
Sbjct: 266 GRLEDAEISFESMRRMIDGKPSVAMYNILIN----GYVNCREHEKVMTVYEKMIKDRVKP 321
Query: 253 VVEVLNQVGGSCLVSGVRAL-IEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCD 311
V N + SC + L +EMF EM K V +N LIK R
Sbjct: 322 DVFTFNSLISSCCRNSQFGLALEMFK-----EMKD---KGCSPNVVSFNTLIKGSFRERK 373
Query: 312 FKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEI 371
F+ + EM ++GCE +T ++ LC+ G+ +AC+LL + G+ P+ Y
Sbjct: 374 FEEGIGMAYEMLELGCEFSNVTCEILVDGLCREGRVLEACDLLIDFSGKGALPNGFDYFC 433
Query: 372 FIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV------- 424
I C D A +Q+ ++G P AFI+G F + E+A++ +
Sbjct: 434 LIEALCGEENVDRALELLDQLWRKGNAPSSIACTAFIEGLRRFRKTEEAFQLMEKMLREG 493
Query: 425 ----------------------------VLSADKYKSSSNMLYSLLASLHDKNNNPVMAK 456
+L++ K S M +++L + + + K
Sbjct: 494 ILPDSVTCNCLLQDLCEVGRSFEANELRLLASSKGLDSDGMTFNILVNGYSREGKRKEGK 553
Query: 457 NVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
+L+EM+ G P+++ Y R++ L H K
Sbjct: 554 RLLNEMLDLGFIPDLASYNRLMNGLSNGGSSHQHK 588
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 7/189 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQ-DAD-----ACE 352
YN +I +CR + LL +M C P +TY+ ++ LCK+ + DAD ACE
Sbjct: 279 YNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACE 338
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+LE M C P+A TY + I CR K A +M+ + P L++ + I
Sbjct: 339 ILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLC 398
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
+ + AYK + +++ + + Y+ L K A V E+M RP V+
Sbjct: 399 KSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVA 457
Query: 473 VYRRVLKHL 481
Y VL L
Sbjct: 458 TYNSVLDGL 466
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 72/155 (46%)
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
C P +TY V+ LCK+G+ A ELL+ M C P+ ITY + + C+ G+ D F
Sbjct: 132 CLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGF 191
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
+M +RG QP + + + G R ++A + V L + + Y+ L L
Sbjct: 192 TLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELF 251
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
++ A ++ M + G P+V Y V+ L
Sbjct: 252 CRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGL 286
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 81/189 (42%), Gaps = 1/189 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI +C+ +LL EMR G P +N V+ LCK G+ DA + +
Sbjct: 33 YGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVA 92
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM-VKRGLQPRLATHAAFIKGYFIFYRY 417
G C PD IT+ I + + G+ + AF F M P + T+ I G +
Sbjct: 93 GTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKL 152
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ A + + L + + + YS+L K +L EM + G +P+V +Y +
Sbjct: 153 DRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTL 212
Query: 478 LKHLHTSHQ 486
L L S +
Sbjct: 213 LNGLCKSRR 221
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 99/249 (39%), Gaps = 34/249 (13%)
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMC 307
+++++N+ G V L+E G + ++++ R+ V YN L+ +C
Sbjct: 158 LLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLC 217
Query: 308 RRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAI 367
+ +L+ M + GC P +TYN ++ + C++ Q A L++ M R C PD I
Sbjct: 218 KSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVI 277
Query: 368 TYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLS 427
Y I CR + D A QMV P + T++ I G +R + +K L
Sbjct: 278 NYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWK---LE 334
Query: 428 ADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQE 487
A A +L M + G PN Y V++ L + +
Sbjct: 335 A--------------------------ACEILEMMKQTGCPPNAGTYAVVIEGLCRARKS 368
Query: 488 HMAKCLSSR 496
A L R
Sbjct: 369 QQALALLRR 377
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 85/186 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y +I +C+ +LL M + GC P +TY+ ++ LCK G+ LL+
Sbjct: 136 VVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQ 195
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM R PD I Y + C+ + D A M++ G P + T+ + ++ +
Sbjct: 196 EMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSK 255
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ + A++ + + +++ + Y+ + + ++ A+ +L +M+ P+V Y
Sbjct: 256 QVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYS 315
Query: 476 RVLKHL 481
++ L
Sbjct: 316 TIIDGL 321
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 68/164 (41%), Gaps = 9/164 (5%)
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
R+ C P TY ++ LCK G+ A ELL+EM R P + I C+ G+F
Sbjct: 22 REERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRF 81
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML---- 438
A +F + P + T + R E+A++ + +SS L
Sbjct: 82 GDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIF----ESMHTSSQCLPNVV 137
Query: 439 -YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y+ + + K+ A +L M + G PNV Y +++ L
Sbjct: 138 TYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGL 181
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 41/93 (44%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P TYN VL LC G+ +A ++E M+ + C PD +Y I CRV + A+
Sbjct: 454 PGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYEL 513
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
F + +G + + + R DA+
Sbjct: 514 FQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAH 546
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 1/127 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+S ++++I +C+ D + M + C+P + Y ++ L K G+ A + E
Sbjct: 387 LSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFE 446
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+ + P TY + C VG+ + A M+ + P A++ A I+G
Sbjct: 447 LMV-ESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVS 505
Query: 416 RYEDAYK 422
E+AY+
Sbjct: 506 CVEEAYE 512
>gi|413939576|gb|AFW74127.1| hypothetical protein ZEAMMB73_460696 [Zea mays]
Length = 581
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 79/183 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI CR + + L M G P TYN +L LC++G + LL EM
Sbjct: 286 YTTLIDGYCRAGNVEEAVKLRGRMEAAGMLPGVATYNAILRKLCEDGNMKEVHRLLHEMD 345
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
GR D +T I C+ G A +M++ GLQ T+ A I G+ +
Sbjct: 346 GRKVQADHVTCNTLINAYCKRGDMTSACKVKKKMMESGLQLNHFTYKALIHGFCKARELD 405
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + D S + ++S L K NN + E+MK GL P+ +VYR ++
Sbjct: 406 GAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLAIPDELMKRGLPPDKAVYRSLI 465
Query: 479 KHL 481
+ L
Sbjct: 466 RRL 468
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 105/237 (44%), Gaps = 13/237 (5%)
Query: 245 LTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIK 304
+ + G+ V N + CL +G A E +++ + A + + YN +I
Sbjct: 169 MARAGLAATTHVYNAMLHVCLKAGDAAQAE--AIVTRMDAAGVTLDRFS-----YNTVIA 221
Query: 305 EMCRRC---DFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
CR+ + RD M + G P T+T+N + LCK G+ +A +L EM+
Sbjct: 222 LYCRKGMGYEAMCARD---RMDKEGIRPDTVTWNSSIHGLCKEGRVKEAAQLFTEMVAAQ 278
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
PD +TY I CR G + A +M G+ P +AT+ A ++ ++ +
Sbjct: 279 ATPDNVTYTTLIDGYCRAGNVEEAVKLRGRMEAAGMLPGVATYNAILRKLCEDGNMKEVH 338
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ + + + ++ + L + + K + A V +MM++GL+ N Y+ ++
Sbjct: 339 RLLHEMDGRKVQADHVTCNTLINAYCKRGDMTSACKVKKKMMESGLQLNHFTYKALI 395
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 66/166 (39%)
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
R + EM + G T YN +L V K G A A ++ M D +Y I
Sbjct: 163 RRVFDEMARAGLAATTHVYNAMLHVCLKAGDAAQAEAIVTRMDAAGVTLDRFSYNTVIAL 222
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
CR G A ++M K G++P T + I G R ++A + +
Sbjct: 223 YCRKGMGYEAMCARDRMDKEGIRPDTVTWNSSIHGLCKEGRVKEAAQLFTEMVAAQATPD 282
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
N+ Y+ L + + N A + M G+ P V+ Y +L+ L
Sbjct: 283 NVTYTTLIDGYCRAGNVEEAVKLRGRMEAAGMLPGVATYNAILRKL 328
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 61/176 (34%), Gaps = 35/176 (19%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI C+ + G ++ +M G P +++++ CK + +E++
Sbjct: 391 YKALIHGFCKARELDGAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLAIPDELM 450
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R PD Y I CR G D A F+QM +GL
Sbjct: 451 KRGLPPDKAVYRSLIRRLCRKGLVDQAQRVFDQMQSKGL--------------------- 489
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+++Y+ LA + NP A N L M KN L +Y
Sbjct: 490 --------------VGDSLVYATLAYTYLTKGNPTAALNTLDGMTKNQLYITPQIY 531
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 90/197 (45%), Gaps = 16/197 (8%)
Query: 230 EKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSG-VRALIEMFSVLGLYEMAKYV 288
+KA L +IS KG V ++N + + +G V A +MF L ++A V
Sbjct: 532 DKATQLLSEMIS------KGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTV 585
Query: 289 IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
+ YNIL+ + + +L M + GC P T+T+N +L L KN
Sbjct: 586 VT--------YNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVD 637
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
A ++ M NC+PD +TY I R G+ D AF FF+QM K+ L P T I
Sbjct: 638 LALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQM-KKFLSPDYVTLCTLI 696
Query: 409 KGYFIFYRYEDAYKYVV 425
G R EDA K V+
Sbjct: 697 PGVVRHGRVEDAIKVVM 713
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+NI+I + + + DL E+ P TY ++ L K G+ A ++ EEML
Sbjct: 869 HNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEML 928
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C P+++ Y I I + G+ D A F +MVK G++P L ++ ++ I R +
Sbjct: 929 DYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRID 988
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A +Y + Y+ + + K+ A ++ SEM G+ P++ Y ++
Sbjct: 989 EAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALI 1048
Query: 479 KHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
HL + + +A + + L SV
Sbjct: 1049 LHLGIAGKVDVAVKMYEELQLVGLEPSV 1076
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 106/244 (43%), Gaps = 11/244 (4%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTE-----RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
L++ F +G E K + E V Y ILI+ +C+ D D+L M
Sbjct: 345 TLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTK 404
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P TYN ++ L K + +A ELLE M P A +Y +FI Y + G A
Sbjct: 405 GIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKA 464
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYK---SSSNMLYSLL 442
+ F M KRG+ P +A A + R +A + D +K S ++ Y++L
Sbjct: 465 IDTFETMKKRGIMPSIAACNASLYTLAETGRISEAED---IFNDLHKCGLSPDSVTYNML 521
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSL 502
+ K A +LSEM+ G P+V + ++ L+ + + A + R +L L
Sbjct: 522 MKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKL 581
Query: 503 GSSV 506
+V
Sbjct: 582 APTV 585
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 73/177 (41%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y +LI +C ++L V+MR P +TY ++ K G
Sbjct: 305 VITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWN 364
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM PD +TY I I C+ G D AF+ + M +G+ P L T+ I G
Sbjct: 365 EMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKAR 424
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
R ++A + + + Y L + K+ +P A + M K G+ P+++
Sbjct: 425 RLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIA 481
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Query: 283 EMAKYVIKKTER-KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
E+ K ++K+ R + Y IL++ +C E++ G +P T++YN+++ L
Sbjct: 957 ELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGL 1016
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
K+ + +A L EM R PD TY I++ GK DVA + ++ GL+P +
Sbjct: 1017 GKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSV 1076
Query: 402 ATHAAFIKGY 411
T+ A I+G+
Sbjct: 1077 FTYNALIRGH 1086
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 2/181 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ L+ + RR D + +LL EM+ +G P TY + L + + DA + +EM
Sbjct: 238 YSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMD 297
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C PD ITY + I C GK D A + +M P T+ + + E
Sbjct: 298 DEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLE 357
Query: 419 DAYKYV-VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
++ + D Y + + Y++L K+ + A ++L M G+ PN+ Y +
Sbjct: 358 TVKRFWNEMEVDGY-APDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTM 416
Query: 478 L 478
+
Sbjct: 417 I 417
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 71/158 (44%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
+L +M+ G P TYN +L K+ + +L EM R C P+AIT+ I I
Sbjct: 817 ELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISAL 876
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
+ + A + + +++ P T+ I G R E A K D ++
Sbjct: 877 VKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNS 936
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
++Y++L + K+ A + +M+K G+RP++ Y
Sbjct: 937 VIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSY 974
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%)
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
D+ ++ + G P ++TYN ++ K GQ A +LL EM+ + C PD + I
Sbjct: 500 EDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINT 559
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ G+ D A+ F ++ L P + T+ + G
Sbjct: 560 LYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTG 594
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 65/157 (41%), Gaps = 2/157 (1%)
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G +P TY+ ++ L + G LLEEM P+ TY I I R + D A
Sbjct: 230 GMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDA 289
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSNMLYSLLAS 444
+ F +M G P + T+ I + + A + YV + A + S + Y L
Sbjct: 290 WGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSH-SPDRVTYITLMD 348
Query: 445 LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K + K +EM +G P+V Y +++ L
Sbjct: 349 KFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEAL 385
>gi|357470109|ref|XP_003605339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506394|gb|AES87536.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 472
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 82/193 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ L+ +C LL EM+ G P + +N ++ LCK G + A +L++ M
Sbjct: 38 YSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMF 97
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C P+ +TY + C GK D A + N+MV P T + G+ R
Sbjct: 98 LKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRAL 157
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
D + +V +K + YS L S K + EM++ G +PN VY ++
Sbjct: 158 DGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALI 217
Query: 479 KHLHTSHQEHMAK 491
L + AK
Sbjct: 218 DGLCREGKPDEAK 230
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 6/160 (3%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
+LV + + G +Y+ ++ L K G+ +L +EM+ + C P+ I Y I C
Sbjct: 162 VLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLC 221
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN- 436
R GK D A + +M +G P T+++ + GYF D +K +++ + + N
Sbjct: 222 REGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYF---EAGDIHKAILVWKEMTDNDCNH 278
Query: 437 --MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ YS+L + KN A V +M+ G++ +V Y
Sbjct: 279 HEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAY 318
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 88/204 (43%), Gaps = 2/204 (0%)
Query: 280 GLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
G+ + V K + Y+ LI +CR ++ L+EM+ G P + TY+ ++
Sbjct: 194 GMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMW 253
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
+ G A + +EM +C+ + Y I I C+ GK A + QM+ RG++
Sbjct: 254 GYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKL 313
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYV--VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKN 457
+ +++ I G+ E K +L + + Y++L + N+ A +
Sbjct: 314 DVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAID 373
Query: 458 VLSEMMKNGLRPNVSVYRRVLKHL 481
+L+ M+ G P+ LK L
Sbjct: 374 ILNTMLDQGCDPDFITCDIFLKTL 397
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 70/185 (37%), Gaps = 16/185 (8%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ILI +C+ K + +M G + + Y+ ++ C +L +ML
Sbjct: 283 YSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQML 342
Query: 359 GRN--CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
N PD +TY I + C A + N M+ +G P T F+K
Sbjct: 343 CHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLK------T 396
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
D + D + L L+ L K V A N++ M++ L P S +
Sbjct: 397 LRD-------NMDPPQDGREFLDELVVRLI-KRQRTVGASNIIEVMLQKFLLPKPSTWAL 448
Query: 477 VLKHL 481
++ L
Sbjct: 449 AVQQL 453
>gi|255569207|ref|XP_002525572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535151|gb|EEF36831.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 687
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 112/245 (45%), Gaps = 13/245 (5%)
Query: 231 KAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIK 290
KAF +L ++ K GI V + +C SG A+ E Y + + +++
Sbjct: 409 KAFQYLGEML------KFGITPSVTTYTLLINACCKSGDMAMAE-------YLLQRMMLE 455
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
V +N LI ++ + +LL MR G P T+TYN ++ L G +A
Sbjct: 456 GLIPDVVTFNCLIDGFGKKGYLQKAFELLDIMRSAGMSPDTVTYNALIHSLIARGYPNEA 515
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
++L E++ R PD +T+ I + G F+ AF ++ M +R ++P + T +A + G
Sbjct: 516 KDILHELIRRGLSPDVMTFTDVIDGFSKKGNFEEAFLVWSYMSERHVKPDVVTCSALLNG 575
Query: 411 YFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
Y R ++A + D +LY+ L N A N+++ M+ +G PN
Sbjct: 576 YCRARRMDEANALFLKMLDAGLKPDLVLYNNLIHGFCSAGNMNAACNLVAMMIDDGFLPN 635
Query: 471 VSVYR 475
++ +R
Sbjct: 636 ITTHR 640
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 76/180 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ + ++C+ + EM + G P Y ++G CK G A + L EML
Sbjct: 359 YSSFMTKLCKDGNMLEASKTFQEMSEFGLYPDCFCYTIIIGGYCKVGDINKAFQYLGEML 418
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P TY + I C+ G +A +M+ GL P + T I G+ +
Sbjct: 419 KFGITPSVTTYTLLINACCKSGDMAMAEYLLQRMMLEGLIPDVVTFNCLIDGFGKKGYLQ 478
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A++ + + S + Y+ L P AK++L E+++ GL P+V + V+
Sbjct: 479 KAFELLDIMRSAGMSPDTVTYNALIHSLIARGYPNEAKDILHELIRRGLSPDVMTFTDVI 538
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 103/289 (35%), Gaps = 56/289 (19%)
Query: 216 QLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEM 275
+LLN F VC + L L+ S L W ++E + G S + IE
Sbjct: 211 KLLNIFPSMGVCNS-----LLKALLRSHQLDLA--WDILEGMQSFGMHLNASILSLFIES 263
Query: 276 FSVLG--------LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGC 327
+ G L EM Y IK V Y I+I +C+ K LL +M G
Sbjct: 264 YCAEGNIQSGWKILMEMKNYGIKA---DVIAYTIVIDALCKISCVKVATSLLFKMIHCGI 320
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
+++ + V+ CK G+ A LL N P+ Y F+ C+ G A
Sbjct: 321 SVDSVSVSSVIDGYCKKGRSDKAINLLNFF---NVRPNIFVYSSFMTKLCKDGNMLEASK 377
Query: 388 FFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHD 447
F +M + GL P + I GY A++Y
Sbjct: 378 TFQEMSEFGLYPDCFCYTIIIGGYCKVGDINKAFQY------------------------ 413
Query: 448 KNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSR 496
L EM+K G+ P+V+ Y ++ S MA+ L R
Sbjct: 414 -----------LGEMLKFGITPSVTTYTLLINACCKSGDMAMAEYLLQR 451
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 86/218 (39%), Gaps = 6/218 (2%)
Query: 199 SLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLN 258
+L+I+ C + D LL + + + F L K +K + +++++
Sbjct: 430 TLLINACCKSGDMAMAEYLLQRMMLEGLIPDVVTFNCLIDGFGKKGYLQKA-FELLDIMR 488
Query: 259 QVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFK 313
G S ALI G AK ++ + R+ V + +I ++ +F+
Sbjct: 489 SAGMSPDTVTYNALIHSLIARGYPNEAKDILHELIRRGLSPDVMTFTDVIDGFSKKGNFE 548
Query: 314 GPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFI 373
+ M + +P +T + +L C+ + +A L +ML PD + Y I
Sbjct: 549 EAFLVWSYMSERHVKPDVVTCSALLNGYCRARRMDEANALFLKMLDAGLKPDLVLYNNLI 608
Query: 374 VYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
C G + A N M+ G P + TH AF G+
Sbjct: 609 HGFCSAGNMNAACNLVAMMIDDGFLPNITTHRAFALGF 646
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 7/189 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQ-DAD-----ACE 352
YN +I +CR + LL +M C P +TY+ ++ LCK+ + DAD ACE
Sbjct: 279 YNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACE 338
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+LE M C P+A TY + I CR K A +M+ + P L++ + I
Sbjct: 339 ILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLC 398
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
+ + AYK + +++ + + Y+ L K A V E+M RP V+
Sbjct: 399 KSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVA 457
Query: 473 VYRRVLKHL 481
Y VL L
Sbjct: 458 TYNSVLDGL 466
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 72/155 (46%)
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
C P +TY V+ LCK+G+ A ELL+ M C P+ ITY + + C+ G+ D F
Sbjct: 132 CLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGF 191
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
+M +RG QP + + + G R ++A + V L + + Y+ L L
Sbjct: 192 TLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELF 251
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
++ A ++ M + G P+V Y V+ L
Sbjct: 252 CRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGL 286
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 81/189 (42%), Gaps = 1/189 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI +C+ +LL EMR G P +N V+ LCK G+ DA + +
Sbjct: 33 YGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVA 92
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM-VKRGLQPRLATHAAFIKGYFIFYRY 417
G C PD IT+ I + + G+ + AF F M P + T+ I G +
Sbjct: 93 GTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKL 152
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ A + + L + + + YS+L K +L EM + G +P+V +Y +
Sbjct: 153 DRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTL 212
Query: 478 LKHLHTSHQ 486
L L S +
Sbjct: 213 LNGLCKSRR 221
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 99/249 (39%), Gaps = 34/249 (13%)
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMC 307
+++++N+ G V L+E G + ++++ R+ V YN L+ +C
Sbjct: 158 LLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLC 217
Query: 308 RRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAI 367
+ +L+ M + GC P +TYN ++ + C++ Q A L++ M R C PD I
Sbjct: 218 KSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVI 277
Query: 368 TYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLS 427
Y I CR + D A QMV P + T++ I G +R + +K L
Sbjct: 278 NYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWK---LE 334
Query: 428 ADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQE 487
A A +L M + G PN Y V++ L + +
Sbjct: 335 A--------------------------ACEILEMMKQTGCPPNAGTYAVVIEGLCRARKS 368
Query: 488 HMAKCLSSR 496
A L R
Sbjct: 369 QQALALLRR 377
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 85/186 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y +I +C+ +LL M + GC P +TY+ ++ LCK G+ LL+
Sbjct: 136 VVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQ 195
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM R PD I Y + C+ + D A M++ G P + T+ + ++ +
Sbjct: 196 EMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSK 255
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ + A++ + + +++ + Y+ + + ++ A+ +L +M+ P+V Y
Sbjct: 256 QVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYS 315
Query: 476 RVLKHL 481
++ L
Sbjct: 316 TIIDGL 321
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 68/164 (41%), Gaps = 9/164 (5%)
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
R+ C P TY ++ LCK G+ A ELL+EM R P + I C+ G+F
Sbjct: 22 REERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRF 81
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML---- 438
A +F + P + T + R E+A++ + +SS L
Sbjct: 82 GDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIF----ESMHTSSQCLPNVV 137
Query: 439 -YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y+ + + K+ A +L M + G PNV Y +++ L
Sbjct: 138 TYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGL 181
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 41/93 (44%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P TYN VL LC G+ +A ++E M+ + C PD +Y I CRV + A+
Sbjct: 454 PGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYEL 513
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
F + +G + + + R DA+
Sbjct: 514 FQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAH 546
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 1/127 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+S ++++I +C+ D + M + C+P + Y ++ L K G+ A + E
Sbjct: 387 LSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFE 446
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+ + P TY + C VG+ + A M+ + P A++ A I+G
Sbjct: 447 LMV-ESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVS 505
Query: 416 RYEDAYK 422
E+AY+
Sbjct: 506 CVEEAYE 512
>gi|255660820|gb|ACU25579.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 418
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 83/183 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +++LI +C+ +L EM G P +T+ ++ CKNG+ A E+
Sbjct: 206 VYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYR 265
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G + ++M +GL+P T+ I G
Sbjct: 266 QMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPDKITYTTLIDGNCKEG 325
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A++Y + + Y+ L S + V A+ +L EM+ GL+P + Y
Sbjct: 326 DLETAFEYRKRMIKENIRLDDXAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 385
Query: 476 RVL 478
++
Sbjct: 386 MII 388
>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Vitis vinifera]
gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
Length = 878
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 81/159 (50%), Gaps = 12/159 (7%)
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
C P +TY+ ++ LCK G+ +A + EM+G++ HPD+I Y+ FI C+ GK AF
Sbjct: 524 CLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAF 583
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGY------FIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
M KRG L T+ + I G F Y D K ++ + + +NM+
Sbjct: 584 RVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPN-ICTYNNMISC 642
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
L K+ A ++L EM++ G+ PN+S +R ++K
Sbjct: 643 LCEGGRIKD-----ATSLLDEMLQKGISPNISSFRLLIK 676
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 6/169 (3%)
Query: 241 SSKALTKKGIWRVVEVLNQVG-GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTER----- 294
+ K L I+R +++ ++G ++ ++E F G+ E AK +++ +R
Sbjct: 269 AGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLM 328
Query: 295 KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
++ YNI + + R + L EM G EP ++N V+ LCKNG +DA ++
Sbjct: 329 ELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIM 388
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
M+ PD +TY + C GK A N ++M++RG P T
Sbjct: 389 GLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYT 437
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 92/215 (42%), Gaps = 17/215 (7%)
Query: 280 GLYEMAKYVIKKTERKVSY-----YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
G +E A+ V K K + IL++ CR +LL M G +P + Y
Sbjct: 165 GRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIY 224
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV- 393
N ++ C+ G++ +A L+E M PD +T+ I C GK A F M
Sbjct: 225 NTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQI 284
Query: 394 --KRGL-QPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML----YSLLASLH 446
+ GL +P + T ++G+ E+A V + K + N++ Y++
Sbjct: 285 DEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLV----ESMKRNGNLMELESYNIWLLGL 340
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+N + A+ L EM+ G+ PN+ + V+ L
Sbjct: 341 VRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGL 375
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 101/244 (41%), Gaps = 6/244 (2%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
I F G A V+K E++ + YN LI + + LL +M++
Sbjct: 568 TFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEK 627
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P TYN ++ LC+ G+ DA LL+EML + P+ ++ + I C+ F V
Sbjct: 628 GITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVV 687
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
F ++ + A ++ I +A + + D+ N Y+ L
Sbjct: 688 KEVF-EIALSICGHKEALYSLMFNELLIGGEVSEAKELFDAALDRCFDLGNFQYNDLIEK 746
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSS 505
K+ A ++L +M+ G R + + + V+ L ++H A L+ R ++
Sbjct: 747 LCKDEMLENASDILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDADELAERMMDMASEGM 806
Query: 506 VEAR 509
VE +
Sbjct: 807 VENK 810
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 7/161 (4%)
Query: 271 ALIEMFSVLGLYEMA-------KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMR 323
ALI + + GL ++A + + V YN++++ R L +M
Sbjct: 84 ALIRILAKSGLSDLAFSQFQSFRSQVPANPPPVYLYNMVLESSLREDKVDSFSWLYKDMV 143
Query: 324 QVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
G P T T N ++ LC +G+ DA E+ ++M + C P+ ++ I + CR G
Sbjct: 144 VAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSM 203
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV 424
A + M G+QP + I + R E+A + V
Sbjct: 204 RALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLV 244
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N+LI +C F+ R++ +M GC P ++ ++ C+ G A ELL+ M
Sbjct: 155 NLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGS 214
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
P+ + Y I CR G+ + A +M + GL P + T
Sbjct: 215 FGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVT 258
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYN-YVLGVLCKNGQDADACELLEEM 357
Y+ I C+ +L +M + GC TYN +LG+ KN Q + LL++M
Sbjct: 566 YDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKN-QIFEIYGLLDDM 624
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
+ P+ TY I C G+ A + ++M+++G+ P +++ IK +
Sbjct: 625 KEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAF 678
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 89/266 (33%), Gaps = 61/266 (22%)
Query: 279 LGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
L L EM V K E + +N ++ +C+ R ++ M G P T+TY+ +L
Sbjct: 351 LALKEM---VDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLL 407
Query: 339 GVLCKNGQDADACELLEEMLGRNCHP---------------------------------- 364
C G+ A +L EM+ R C P
Sbjct: 408 HGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYD 467
Query: 365 -DAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ-----------------------PR 400
D +T I I C+ GK D A M G P
Sbjct: 468 LDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPD 527
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
L T++ I G R ++A K + K +++Y K+ A VL
Sbjct: 528 LITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLK 587
Query: 461 EMMKNGLRPNVSVYRRVLKHLHTSHQ 486
+M K G ++ Y ++ L + +Q
Sbjct: 588 DMEKRGCNKSLQTYNSLILGLGSKNQ 613
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 1/209 (0%)
Query: 283 EMAKYV-IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
++A+ V +K V +NILI +C+ D L EM+ GC P +TYN ++ L
Sbjct: 377 DLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNL 436
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
C G+ A +LL++M C ITY I C+ + + A F+QM +G+
Sbjct: 437 CSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNA 496
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
T I G + +DA+ + + +N+ Y+ + + + K + A ++L
Sbjct: 497 ITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILET 556
Query: 462 MMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
M NG +V Y ++ L + + +A
Sbjct: 557 MTANGFEVDVVTYGTLINGLCKAGRTQVA 585
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 86/206 (41%), Gaps = 5/206 (2%)
Query: 280 GLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
G E AK ++ + + ++ +N LI +C + DL ++ G P T+
Sbjct: 335 GQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTF 394
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N ++ LCK G A L EEM C PD +TY I C +GK A + M
Sbjct: 395 NILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMES 454
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM 454
G T+ I G R E+A + + S + + ++ L K+
Sbjct: 455 TGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDD 514
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVLKH 480
A ++++M+ GL+PN Y +L H
Sbjct: 515 AFGLINQMISEGLQPNNITYNSILTH 540
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 78/182 (42%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N+LI C+ + + + G EP +TYN + LC+N A ++++ M+
Sbjct: 255 NVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQ 314
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
PD TY I + C+ G+ + A NQMV RG P + T I R E+
Sbjct: 315 EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEE 374
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
A K S +++L + K +P +A + EM +G P+ Y ++
Sbjct: 375 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 434
Query: 480 HL 481
+L
Sbjct: 435 NL 436
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 5/162 (3%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNILIKEM 306
RV + ++G S V LI + LG E A I++ E YN + +
Sbjct: 237 RVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGL 296
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
C+ ++ M Q G +P TYN V+ LCKNGQ +A +L +M+ R C PD
Sbjct: 297 CQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDI 356
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
T+ I C + + A + Q+ +G+ P + T I
Sbjct: 357 TTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILI 398
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 79/194 (40%), Gaps = 1/194 (0%)
Query: 289 IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
++ R +N LI +C+ L+ +M G +P +TYN +L CK G
Sbjct: 489 LQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIK 548
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
A ++LE M D +TY I C+ G+ VA M +G++P + +
Sbjct: 549 KAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVL 608
Query: 409 KGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM-AKNVLSEMMKNGL 467
+ F DA A+ + + Y ++ + P+ A + + EM+ G
Sbjct: 609 QSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGF 668
Query: 468 RPNVSVYRRVLKHL 481
P S +R + + L
Sbjct: 669 IPEFSSFRMLAEGL 682
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 90/216 (41%), Gaps = 3/216 (1%)
Query: 283 EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLC 342
EM IK V +N L+K +CR + +L EM G P T+ ++
Sbjct: 171 EMGARGIKP---DVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFV 227
Query: 343 KNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLA 402
+ G A + ML C +T + I C++G+ + A + Q + G +P
Sbjct: 228 EEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQI 287
Query: 403 THAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM 462
T+ F+ G A K + + + Y+++ + KN AK +L++M
Sbjct: 288 TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 347
Query: 463 MKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYS 498
+ G P+++ + ++ L T ++ A L+ + +
Sbjct: 348 VDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVT 383
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 79/195 (40%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ + K + EM G +P +T+N ++ LC+ Q A +LEEM
Sbjct: 149 YNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMS 208
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R PD T+ + G + A +M++ G T I GY R E
Sbjct: 209 SRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVE 268
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA Y+ + Y+ + +N++ A V+ M++ G P+V Y V+
Sbjct: 269 DALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVV 328
Query: 479 KHLHTSHQEHMAKCL 493
L + Q AK +
Sbjct: 329 NCLCKNGQLEEAKGI 343
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 76/190 (40%), Gaps = 11/190 (5%)
Query: 312 FKGPRDLLVEMRQ--VGCEPITLTYNYVLGVLCKNGQDADACELLE----EMLGRNCHPD 365
F DL++ Q G + T+ YN++L VL + + +LLE EM R PD
Sbjct: 125 FDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSK----MKLLESVYSEMGARGIKPD 180
Query: 366 AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV 425
+T+ + CR + A +M RG+ P T ++G+ E A +
Sbjct: 181 VVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKA 240
Query: 426 LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL-HTS 484
+ S++ + ++L + + K A + + + +G P+ Y + L
Sbjct: 241 RMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQND 300
Query: 485 HQEHMAKCLS 494
H H K +
Sbjct: 301 HVGHALKVMD 310
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 4/157 (2%)
Query: 347 DADAC-ELLEEMLGRN-CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
D DA +L L R+ P YE I VG D+ +M + G Q +L
Sbjct: 53 DPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVV 112
Query: 405 AAFIKGYFIFYRYEDAYKYVV--LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM 462
+F+ Y ++DA ++ L + ++Y+ L ++ + + + ++V SEM
Sbjct: 113 HSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEM 172
Query: 463 MKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSS 499
G++P+V + ++K L +HQ A + SS
Sbjct: 173 GARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSS 209
>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 82/180 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++ +C+R RDLL++M+ G P TYN ++ CK +A E++E M
Sbjct: 249 YNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMT 308
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
G+ PD TY + C GK D A ++M L P + T+ I G F +
Sbjct: 309 GKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSD 368
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A+K V + + + ++++ A NV+ +M+++G P+ Y ++
Sbjct: 369 AAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMI 428
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 81/181 (44%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L EM++ G +TYN ++ LC +G+ A + L E+L + PD T I I C
Sbjct: 513 LWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYC 572
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
G + AF F N+MV+ L+P + T ++G E K K +
Sbjct: 573 WEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTV 632
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRY 497
Y+++ S K A ++++EM L P+ Y ++ L + + A+ L+ ++
Sbjct: 633 TYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKF 692
Query: 498 S 498
+
Sbjct: 693 A 693
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 59/128 (46%), Gaps = 2/128 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL-GVLCKNGQDADACELL 354
V YN +++ +C L +M P +TYN ++ G G DA A +L+
Sbjct: 316 VWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDA-AFKLV 374
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
EEM R + +T+ I I + C GK D A N +MV+ G P T+ I GY
Sbjct: 375 EEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKA 434
Query: 415 YRYEDAYK 422
+ +AYK
Sbjct: 435 GKMAEAYK 442
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 77/186 (41%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI L+ EM+ G + +T+N ++ C G+ +A ++
Sbjct: 351 VVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMV 410
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M+ PD TY I C+ GK A+ ++M ++GL+ T + +
Sbjct: 411 KMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEK 470
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ +DAY + + + + Y L + K+ A + EM + G+ + Y
Sbjct: 471 QLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYN 530
Query: 476 RVLKHL 481
+++ L
Sbjct: 531 TIIRGL 536
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 11/152 (7%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
NI+I C + +M + +P T N +L LC+ G L +
Sbjct: 565 NIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWIS 624
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
+ D +TY I I C+ + + AF+ +M + L+P T+ A + G R E+
Sbjct: 625 KGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEE 684
Query: 420 AYKYVVLSADKYK-----------SSSNMLYS 440
A K + A+K + +S+M+YS
Sbjct: 685 AEKLALKFAEKGQQVKTQDTSPELGTSDMMYS 716
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 72/183 (39%), Gaps = 10/183 (5%)
Query: 256 VLNQVGGSCLVSGVRALIEMFSVLGLYE-MAKYVIKKTERKVSYYNILIKEMCRRCDFKG 314
+L++V L+ G + L L+E M + I T + YN +I+ +C
Sbjct: 488 ILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVAT---IITYNTIIRGLCLSGKTDQ 544
Query: 315 PRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIV 374
D L E+ + G P T N ++ C G A + +M+ + PD T I +
Sbjct: 545 AVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLR 604
Query: 375 YSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV------LSA 428
CR G + FN + +G T+ I + R EDA+ + L
Sbjct: 605 GLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEP 664
Query: 429 DKY 431
D+Y
Sbjct: 665 DRY 667
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 54/124 (43%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N L+ MC L ++ R+ G +TY ++ K+ Q A +L EEM
Sbjct: 460 NTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKE 519
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
ITY I C GK D A + N+++++GL P +T I GY E
Sbjct: 520 TGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEK 579
Query: 420 AYKY 423
A+++
Sbjct: 580 AFQF 583
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 50/115 (43%)
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
R++ + ++G +P T+N ++ C + +A L+ +M C PD +TY +
Sbjct: 196 REVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTA 255
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADK 430
C+ + + QM GL P T+ + GY ++A + + L K
Sbjct: 256 LCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGK 310
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 59/142 (41%), Gaps = 11/142 (7%)
Query: 280 GLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
GL ++ K YNI+I C+ + DL+ EM EP TYN ++
Sbjct: 615 GLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVT 674
Query: 340 VLCKNGQDADACELL-------EEMLGRNCHPDAITYEIF----IVYSCRVGKFDVAFNF 388
L K G+ +A +L +++ ++ P+ T ++ I C GK+ A
Sbjct: 675 GLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKL 734
Query: 389 FNQMVKRGLQPRLATHAAFIKG 410
F Q ++G+ T+ + G
Sbjct: 735 FQQAEQKGVSLNKYTYIKLMDG 756
>gi|255661018|gb|ACU25678.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 376
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 91/184 (49%), Gaps = 2/184 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI + F+ + EM C P +TYN ++ LCK + +A +L++EML
Sbjct: 167 YNALINGLVGASKFEDAIRVFQEMGNTHCSPTIITYNTLINGLCKAERFGEAYDLVKEML 226
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ +P ITY + I C K ++A + +NQ++ +G +P + H I G + +
Sbjct: 227 EKGWNPCVITYSLLIKGLCLGRKVEMALHLWNQVINKGFKPDVQMHNILIHGLCSVGKTQ 286
Query: 419 DAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
A + +++ + N++ ++ L K+ + A + +++NG++P++ Y
Sbjct: 287 LALS-LYFDMNRWNCAPNLVTHNTLMZGFYKDGDIRNALATWARILRNGVQPDIISYNIT 345
Query: 478 LKHL 481
LK L
Sbjct: 346 LKGL 349
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 94/209 (44%)
Query: 282 YEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+E+ + + K+ R V+ +NI+++ + + M++ G ++TY ++ L
Sbjct: 45 FELWELMGKEGGRNVASFNIMMRGLFDNGKVNEVISIWELMKKSGFVEDSITYGILVHGL 104
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
CKNG + +LE + DA Y I + C+ K D A + N M+K G P
Sbjct: 105 CKNGDINKSLHMLEIAEVKGGVLDAFAYSAMINWLCKDSKLDKAVSVLNGMIKXGCMPNA 164
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
+ A I G ++EDA + + + S + + Y+ L + K A +++ E
Sbjct: 165 HVYNALINGLVGASKFEDAIRVFQEMGNTHCSPTIITYNTLINGLCKAERFGEAYDLVKE 224
Query: 462 MMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
M++ G P V Y ++K L + MA
Sbjct: 225 MLEKGWNPCVITYSLLIKGLCLGRKVEMA 253
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 80/192 (41%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y IL+ +C+ D +L G Y+ ++ LCK+ + A +L M+
Sbjct: 97 YGILVHGLCKNGDINKSLHMLEIAEVKGGVLDAFAYSAMINWLCKDSKLDKAVSVLNGMI 156
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C P+A Y I KF+ A F +M P + T+ I G R+
Sbjct: 157 KXGCMPNAHVYNALINGLVGASKFEDAIRVFQEMGNTHCSPTIITYNTLINGLCKAERFG 216
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+AY V +K + + YSLL MA ++ ++++ G +P+V ++ ++
Sbjct: 217 EAYDLVKEMLEKGWNPCVITYSLLIKGLCLGRKVEMALHLWNQVINKGFKPDVQMHNILI 276
Query: 479 KHLHTSHQEHMA 490
L + + +A
Sbjct: 277 HGLCSVGKTQLA 288
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 53/125 (42%)
Query: 279 LGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
+ L+ + + K + V +NILI +C + L +M + C P +T+N ++
Sbjct: 252 MALHLWNQVINKGFKPDVQMHNILIHGLCSVGKTQLALSLYFDMNRWNCAPNLVTHNTLM 311
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
K+G +A +L PD I+Y I + C + A F + + + +
Sbjct: 312 ZGFYKDGDIRNALATWARILRNGVQPDIISYNITLKGLCSCNRISGAILFLHDALTKKIF 371
Query: 399 PRLAT 403
P + T
Sbjct: 372 PTIIT 376
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 109/269 (40%), Gaps = 29/269 (10%)
Query: 242 SKALTKKGIWRVVEVLNQ-VGGSCLVSGVRALIEMFSVL--------------------- 279
++ LT KGI V N + G CL R +E+F +
Sbjct: 388 ARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCS 447
Query: 280 -GLYEMAKYVIKKTE-----RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLT 333
G + A ++K+ E R V YN LI C+ + ++ EM G ++T
Sbjct: 448 KGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVT 507
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
YN ++ LCK+ + DA +L+++M+ PD TY + + CR G A + M
Sbjct: 508 YNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMT 567
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPV 453
G +P + T+ I G R E A K + K + + Y+ + +
Sbjct: 568 SNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTT 627
Query: 454 MAKNVLSEMM-KNGLRPNVSVYRRVLKHL 481
A N+ EM+ +N P+ YR V + L
Sbjct: 628 EAINLFREMLEQNEAAPDAVSYRIVFRGL 656
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 91/201 (45%), Gaps = 9/201 (4%)
Query: 217 LLNDFNVYQVCLNEKAFG-FLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEM 275
+L D Y + +EK F + I L G R+ E + + G S V ++
Sbjct: 211 MLEDMPSYGLVPDEKTFTTIMQGYIEEGDL--DGALRIREQMVEFGCSWSNVSVNVIVHG 268
Query: 276 FSVLGLYEMAKYVIKKTERKVSYY------NILIKEMCRRCDFKGPRDLLVEMRQVGCEP 329
F G E A I++ + ++ N L+ +C+ K +++ M Q G +P
Sbjct: 269 FCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDP 328
Query: 330 ITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFF 389
TYN V+ LCK G+ +A E L++M+ R+C P+ +TY I C+ + + A
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA 388
Query: 390 NQMVKRGLQPRLATHAAFIKG 410
+ +G+ P + T + I+G
Sbjct: 389 RVLTSKGILPDVCTFNSLIQG 409
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 97/257 (37%), Gaps = 43/257 (16%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
V G C V+ IE+ V+ + + + V YN +I +C+ + K + L
Sbjct: 302 VNGLCKAGHVKHAIEIMDVM--------LQEGYDPDVYTYNSVISGLCKLGEVKEAVEFL 353
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACEL-------------------------- 353
+M C P T+TYN ++ LCK Q +A EL
Sbjct: 354 DQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLT 413
Query: 354 ---------LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
EEM + C PD TY + I C GK D A N QM G + T+
Sbjct: 414 RNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITY 473
Query: 405 AAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMK 464
I G+ + +A + S +++ Y+ L K+ A ++ +M+
Sbjct: 474 NTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIM 533
Query: 465 NGLRPNVSVYRRVLKHL 481
G +P+ Y +L H
Sbjct: 534 EGQKPDKFTYNSLLTHF 550
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 92/215 (42%), Gaps = 4/215 (1%)
Query: 277 SVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNY 336
++L L +M Y + E+ + +++ D G + +M + GC ++ N
Sbjct: 208 AILMLEDMPSYGLVPDEKT---FTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNV 264
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCH-PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR 395
++ CK G+ DA ++EM ++ PD T+ + C+ G A + M++
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324
Query: 396 GLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMA 455
G P + T+ + I G ++A +++ + S + + Y+ L S K N A
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384
Query: 456 KNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
+ + G+ P+V + +++ L + +A
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVA 419
>gi|255660826|gb|ACU25582.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 418
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 87/183 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ +L EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYK 265
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G + A + ++M +GL+P T+ I G
Sbjct: 266 QMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYTTLIDGCCKEG 325
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ A+++ + ++ Y+ L S + V A+ ++ EM+ GL+P+ Y
Sbjct: 326 DLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSFGLKPDTGTYT 385
Query: 476 RVL 478
++
Sbjct: 386 MII 388
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 55/115 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN L+ R D L M G +P TY+ ++ LCK + DA EL E
Sbjct: 171 VVSYNTLMNGYIRLGDLNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFE 230
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
EML + P+ +T+ I C+ G+ D+A + QM+ + L P L T+ I G
Sbjct: 231 EMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYG 285
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 42/105 (40%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI C+ D + M Q + Y ++ LC+ G+ DA +++ EML
Sbjct: 314 YTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREML 373
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
PD TY + I C+ G +M + G P + T
Sbjct: 374 SFGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVT 418
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 60/145 (41%)
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
+N ++ CK G A + + + P ++Y + R+G + F + M
Sbjct: 139 FNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFKLKSAMH 198
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPV 453
G+QP + T++ I G + +DA + K + + ++ L H KN
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 454 MAKNVLSEMMKNGLRPNVSVYRRVL 478
+A V +M+ L P++ Y ++
Sbjct: 259 LAMEVYKQMLSQSLLPDLITYNTLI 283
>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
Length = 833
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 58/113 (51%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ILI +C + L EM + GC+P T TY ++ C G A ++L+EM
Sbjct: 202 YSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMA 261
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
+ C P+ TY I I CR GK + A F +M+K GL P + T A I GY
Sbjct: 262 TKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGY 314
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 3/133 (2%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L +M KY + + V + ILI+ CR + +L M+Q GC P TY ++
Sbjct: 502 LGKMMKYGLVPS---VVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIING 558
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
LC NG+ +A +L M P+ TY + + + G+ D AF + MVK G QP
Sbjct: 559 LCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPN 618
Query: 401 LATHAAFIKGYFI 413
++A + G+ +
Sbjct: 619 SHIYSALLSGFVL 631
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 101/231 (43%), Gaps = 7/231 (3%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-VSY----YNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI+ LG E A ++ +K +S + LI C+ K L M +
Sbjct: 414 ALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVEN 473
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
C T+N L L K+ + +A +L +M+ P +T+ I I CR G+ ++
Sbjct: 474 RCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALS 533
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML-YSLLAS 444
+M + G P + T+ I G R E+A + ++ S + S N Y++L
Sbjct: 534 LKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEA-ETILFSMSSFGVSPNHFTYAVLVK 592
Query: 445 LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSS 495
H K A ++S M+KNG +PN +Y +L S+ A+ LSS
Sbjct: 593 AHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSS 643
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 77/182 (42%), Gaps = 5/182 (2%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI+ G E A V +K + + +N LI C+ LL M +
Sbjct: 275 LIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGN 334
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
C+P TYN ++ LC+ + A LL ++ PD +TY I + C+ G+ ++AF
Sbjct: 335 CKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAF 394
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
N FN M GL+P T A I G R E A + K S + ++ L H
Sbjct: 395 NIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGH 454
Query: 447 DK 448
K
Sbjct: 455 CK 456
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 81/181 (44%), Gaps = 1/181 (0%)
Query: 302 LIKEMCRRCDFKGPRDLLVEM-RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGR 360
L+ CRR D + +M ++ C P ++TY+ ++ LC+ G+ +A +L +EM+ +
Sbjct: 169 LVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEK 228
Query: 361 NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
C P TY + I C +G D A ++M + P + T+ I + E+A
Sbjct: 229 GCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEA 288
Query: 421 YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKH 480
+ ++ L + + K V A +LS M K +PN+ Y +++
Sbjct: 289 NGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEG 348
Query: 481 L 481
L
Sbjct: 349 L 349
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
E+++ G P YN+++ LCK G+ +A +L ++M+ PD I I + C+
Sbjct: 681 EIKKCGV-PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSI-IEHYCKTC 738
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV 424
K+D F ++ P A++ I G R ++A K V
Sbjct: 739 KYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLV 782
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 80/180 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N ++ MC+ + R + EM + G P ++YN ++G CK G +A + EM
Sbjct: 263 FNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMT 322
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD +T+ I C+ G + A QM +RGLQ T A I G+ +
Sbjct: 323 QKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLD 382
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA V S + Y+ L + + A+ +L EM GL+P+V Y ++
Sbjct: 383 DALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTII 442
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 92/228 (40%), Gaps = 40/228 (17%)
Query: 271 ALIEMFSVLGLYEMAKYVIK-----KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI+ F G + A ++ + + V YN LI C R+LL EM
Sbjct: 370 ALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAK 429
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G +P +TY+ ++ CKN A EL ++ML + PDAITY I C + A
Sbjct: 430 GLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDA 489
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
F M+K GLQP T+ + I G+ E A SL
Sbjct: 490 HVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESAL----------------------SL 527
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
HDK M+K G+ P+V Y ++ L S + A+ L
Sbjct: 528 HDK-------------MVKAGVLPDVVTYSVLINGLSKSARAMEAQQL 562
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 58/116 (50%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YNIL++ +C R K +L +MR GC P +TYN ++ + G+ A L+
Sbjct: 190 VYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVG 249
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
M P+ +T+ + C+ GK + A F++MV+ GL P ++ + GY
Sbjct: 250 MMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGY 305
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 68/159 (42%)
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
R M G P TYN ++ LC G +A +L +M G C P+ +TY +
Sbjct: 175 RRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAA 234
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
R G+ D A M + GL+P L T + + G + EDA K + +
Sbjct: 235 FFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPD 294
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ Y+ L + K A +V +EM + G+ P+V +
Sbjct: 295 GVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTF 333
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 81/183 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ C+ + EM Q G P +T+ ++ V+CK G A L+ +M
Sbjct: 298 YNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMR 357
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R + +T+ I C+ G D A M + ++P + + A I GY + R +
Sbjct: 358 ERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMD 417
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + + K + YS + S + KN + A + +M++ G+ P+ Y ++
Sbjct: 418 EARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLI 477
Query: 479 KHL 481
+ L
Sbjct: 478 RVL 480
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 24/141 (17%)
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
C G +A ++ + ML RN + D Y + I CR G A +F QM++ G P
Sbjct: 601 CMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNS 660
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKY------------KSSSNMLYSLLASLHDKN 449
+ + I+G F E+ +V+ AD+ +S L L +L++ N
Sbjct: 661 TSTISLIRGLF-----ENG---MVVEADQVIQQLLNYCSLADAEASKALIDL--NLNEGN 710
Query: 450 NNPVMAKNVLSEMMKNGLRPN 470
+ V+ +VL M K+GL P+
Sbjct: 711 VDAVL--DVLHGMAKDGLLPS 729
>gi|356507117|ref|XP_003522317.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g61400-like [Glycine max]
Length = 498
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 11/198 (5%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N++I C+ D + ++ +M + EP +T++ ++ C G A L EM+
Sbjct: 243 FNVVIDGCCKIGDMEKAIEVCSQMTEEXIEPNVITFSILIDGFCNKGNVRAAMGLYTEMV 302
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD +TY I C+VG AF +M+ GL P + T + I G R
Sbjct: 303 IKGIVPDVVTYTALIDGHCKVGNTKEAFRLHKEMLDAGLSPNMFTVSCVIDGLLKDGRTN 362
Query: 419 DAYKYVV------LSADK----YKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLR 468
DA K + DK + S ++M+Y++L ++ A +EM NG +
Sbjct: 363 DAIKMFLEKTGAGYPGDKMDSRFCSPNSMMYAILIQGLCEDGXIFKATKFFAEMKWNGFK 422
Query: 469 PNVSVYRRVLK-HLHTSH 485
P++ VY +L+ H + H
Sbjct: 423 PDMLVYVTMLQAHFQSKH 440
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 115/310 (37%), Gaps = 78/310 (25%)
Query: 176 SALCFLKYMREIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGF 235
A+ ++ M E+ E + NS ++VID C ++ D E +VC
Sbjct: 223 EAMGLMEKMDEV--EVFANSVXFNVVIDGCCKIGDME---------KAIEVCSQMTEEXI 271
Query: 236 LPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK 295
P +I+ L + G C VRA +GLY + VIK
Sbjct: 272 EPNVITFSIL--------------IDGFCNKGNVRA------AMGLY--TEMVIKGIVPD 309
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y LI C+ + K L EM G P T + V+ L K+G+ DA ++
Sbjct: 310 VVTYTALIDGHCKVGNTKEAFRLHKEMLDAGLSPNMFTVSCVIDGLLKDGRTNDAIKMFL 369
Query: 356 EMLG----------RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
E G R C P+++ Y I I C G A FF +M G +P + +
Sbjct: 370 EKTGAGYPGDKMDSRFCSPNSMMYAILIQGLCEDGXIFKATKFFAEMKWNGFKPDMLVYV 429
Query: 406 AFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKN 465
++ +F S +M+ ++ LH ++M+K
Sbjct: 430 TMLQAHF--------------------QSKHMIDVMM--LH-------------ADMVKM 454
Query: 466 GLRPNVSVYR 475
G+ N +YR
Sbjct: 455 GVIQNTFIYR 464
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 62/134 (46%), Gaps = 17/134 (12%)
Query: 352 ELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
E+ +M+ R P ITY I + C G F A F++M++RG++P + + +
Sbjct: 25 EVYVDMMSRRFSPTVITYGILMNCCCAQGDFSNAQKVFDEMLERGIEPNVVIYGQMGEAE 84
Query: 412 FIFYRYEDAYKYVVLSADKYKSSSNM-LYSLLASLHDKNNNPVMAKNVL---SEMMKNGL 467
+F R ++ V++ + Y + M YS++ + K V +M+K GL
Sbjct: 85 GVFGRMRESG---VVTPNLYTYKTLMDGYSMMGDV----------KRVFYLYCDMLKPGL 131
Query: 468 RPNVSVYRRVLKHL 481
P+V + ++ L
Sbjct: 132 YPDVVTFATLIDVL 145
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 73/183 (39%), Gaps = 17/183 (9%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N L+ + + F ++ V+M P +TY ++ C G ++A ++ +EML
Sbjct: 8 NALLHGLVKTQMFDSLWEVYVDMMSRRFSPTVITYGILMNCCCAQGDFSNAQKVFDEMLE 67
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG-LQPRLATHAAFIKGYFIFYRYE 418
R P+ + Y G+ A F +M + G + P L T+ + GY +
Sbjct: 68 RGIEPNVVIY----------GQMGEAEGVFGRMRESGVVTPNLYTYKTLMDGYSMM---G 114
Query: 419 DAYKYVVLSADKYKSS---SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
D + L D K + ++ L + K + A N + M K + PN Y
Sbjct: 115 DVKRVFYLYCDMLKPGLYPDVVTFATLIDVLRKMGDLKAAXNCFAYMAKFDVVPNGHAYN 174
Query: 476 RVL 478
++
Sbjct: 175 SLI 177
>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
Length = 812
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 81/183 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+L+ +C++ + EM G P Y +L LC G+ +A +LL M
Sbjct: 210 YNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMK 269
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C PD +TY F+ C+VG+ + AF + G L ++ I G F R++
Sbjct: 270 DKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFD 329
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ + Y ++ S +LY+++ + A + L M K G P+ Y VL
Sbjct: 330 EGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVL 389
Query: 479 KHL 481
K L
Sbjct: 390 KVL 392
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 102/242 (42%), Gaps = 31/242 (12%)
Query: 261 GGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRD--- 317
G SCL+ G +F E Y ER +S +L M R C G +
Sbjct: 314 GYSCLIDG------LFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDAL 367
Query: 318 -LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
L M++ G P T YN VL VLC +G A L EML N D+ T I I
Sbjct: 368 SFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGL 427
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA---------------Y 421
C+ G D A F++M + G P + T+ A I G++ R E+A +
Sbjct: 428 CKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLF 487
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHD--KNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
+ L A++ S SL +HD ++ + A +L ++ +G+ P+V Y ++
Sbjct: 488 LRLTLGANQVCDSE----SLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLIN 543
Query: 480 HL 481
L
Sbjct: 544 GL 545
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 51/108 (47%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M GC P TYN ++ LCK G DA ++ +EML R P+ Y + + C GK
Sbjct: 198 MVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGK 257
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSAD 429
D A M +G P T+ AF+ G R +A++ +V+ D
Sbjct: 258 IDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQD 305
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 72/172 (41%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y +L+ +C LL M+ GC P +TYN L LCK G+ +A + L
Sbjct: 242 VKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLV 301
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ Y I + +FD F ++ M++R + P + + I+G
Sbjct: 302 MLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAG 361
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
R EDA ++ + K Y+ + + + + A + SEM++N L
Sbjct: 362 RIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNL 413
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 101/249 (40%), Gaps = 28/249 (11%)
Query: 176 SALCFLKYMRE--IMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAF 233
AL FL M++ +P+ + + + ++ D+ G L+ T+R + N+ L+
Sbjct: 365 DALSFLDVMKKKGFVPDTFCYNTVLKVLCDH-GDLERAHTLRSEMLQNNLV---LDSTTQ 420
Query: 234 GFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTE 293
+ + + L + + ++ + + + G V ALI+ F G E A+ + K E
Sbjct: 421 TIMICGLCKRGLVDEAM-QIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKME 479
Query: 294 --RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADAC 351
S + L + CD + R L+ +M C++GQ A
Sbjct: 480 MGNNPSLFLRLTLGANQVCDSESLRKLVHDM-------------------CQSGQVLKAY 520
Query: 352 ELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
+LL ++ PD +TY I C+ D A F ++ +G+ P T+ I G
Sbjct: 521 KLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGL 580
Query: 412 FIFYRYEDA 420
+R DA
Sbjct: 581 LRAHRENDA 589
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 37/87 (42%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M + P YN +L L +G A L M+ C P+ TY + + C+ G
Sbjct: 163 MDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGM 222
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFI 408
A F++M+ RG+ P + + +
Sbjct: 223 AGDALKMFDEMLDRGIMPNVKIYTVLL 249
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 1/113 (0%)
Query: 278 VLGLYEMAKYVIKK-TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNY 336
VL Y++ + +I V YN LI +C+ + G L E++ G P +TY
Sbjct: 516 VLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGT 575
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFF 389
++ L + ++ DA L + +L P Y + CR+ K A N +
Sbjct: 576 LIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLW 628
Score = 38.1 bits (87), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 58/165 (35%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
D L + R G + + ++ G++ADA + M P A Y +
Sbjct: 123 DALADARAAGLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKAL 182
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
G +A +N+MV G P AT+ + G DA K D+ +
Sbjct: 183 VDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNV 242
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+Y++L S A +L M G P+ Y L L
Sbjct: 243 KIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGL 287
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 84/186 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI CR+ + +L+ M G +P TYN ++ LCK G+ A +L+
Sbjct: 132 VVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLD 191
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EML PD TY I +V CR A F++M +G+ P L + +A I
Sbjct: 192 EMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNG 251
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ A KY + + N++Y++L +N A V EM++ G +V Y
Sbjct: 252 CLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYN 311
Query: 476 RVLKHL 481
+L L
Sbjct: 312 TILNGL 317
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 84/199 (42%), Gaps = 2/199 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN ++ +C+ +L EM + G P T+ ++ K+G A L E
Sbjct: 307 VVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFE 366
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+ RN PD +TY I C+ + + +N M+ R + P ++ I GY
Sbjct: 367 MMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMG 426
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+A++ +K ++ + + + + + N V A LS M+ G+ P+ Y
Sbjct: 427 CVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYN 486
Query: 476 RVLKHLHTSHQEHMAKCLS 494
++ +E+M + +
Sbjct: 487 TLINGF--IKEENMDRAFA 503
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 72/172 (41%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ILI C L EM + G E +T N ++ C+ G A E L ML
Sbjct: 415 YGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNML 474
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD ITY I + D AF N+M GL P + T+ + G+ R +
Sbjct: 475 LKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQ 534
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
+A ++ ++ + Y+ L + H NN A V EM++ G P+
Sbjct: 535 EAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 586
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M+ G P + Y ++G C+NG ++A ++ +EML + C D +TY + C+
Sbjct: 262 DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEK 321
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
A F +M +RG+ P T I GY
Sbjct: 322 MLSEADELFTEMTERGVFPDFYTFTTLINGY 352
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 60/137 (43%)
Query: 286 KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNG 345
+ V K E + N ++K CR + + L M G P +TYN ++ K
Sbjct: 437 EMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEE 496
Query: 346 QDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
A L+ +M PD ITY + + R G+ A +M++RG+ P +T+
Sbjct: 497 NMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYT 556
Query: 406 AFIKGYFIFYRYEDAYK 422
+ I G+ ++A++
Sbjct: 557 SLINGHVTQNNLKEAFR 573
>gi|255579531|ref|XP_002530608.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529856|gb|EEF31788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 596
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 86/184 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ ++ L+ CR + +LV+MR+ G EP + +N +L G+ DA +LL+
Sbjct: 245 LRHFTSLLYGWCREGKLIEAKHVLVQMREAGFEPDIVVFNNLLSAYSMAGKMTDAFDLLK 304
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM+ + C P+A +Y I I C K D A F +M + G + + T+ A I G+ +
Sbjct: 305 EMVRKGCEPNANSYTIMIQAFCSQEKMDEAMRVFVEMERTGCEADVVTYTALISGFCKWG 364
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ Y+ + K + + Y + H+K ++ M G P++S+Y
Sbjct: 365 KINRGYQILDAMKQKGHMPNQLTYLRILLAHEKKEELEECLELIESMRMVGCVPDLSIYN 424
Query: 476 RVLK 479
V++
Sbjct: 425 VVIR 428
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 71/196 (36%), Gaps = 34/196 (17%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGR---------------- 360
++L EM + GCEP + +L LCKNG A L E+M R
Sbjct: 197 EVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKQAASLFEDMRVRFSPSLRHFTSLLYGWC 256
Query: 361 ------------------NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLA 402
PD + + + GK AF+ +MV++G +P
Sbjct: 257 REGKLIEAKHVLVQMREAGFEPDIVVFNNLLSAYSMAGKMTDAFDLLKEMVRKGCEPNAN 316
Query: 403 THAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM 462
++ I+ + + ++A + V + + Y+ L S K +L M
Sbjct: 317 SYTIMIQAFCSQEKMDEAMRVFVEMERTGCEADVVTYTALISGFCKWGKINRGYQILDAM 376
Query: 463 MKNGLRPNVSVYRRVL 478
+ G PN Y R+L
Sbjct: 377 KQKGHMPNQLTYLRIL 392
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 88/236 (37%), Gaps = 48/236 (20%)
Query: 282 YEMAKYVIKKT-ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
+++ K +++K E + Y I+I+ C + + VEM + GCE +TY ++
Sbjct: 300 FDLLKEMVRKGCEPNANSYTIMIQAFCSQEKMDEAMRVFVEMERTGCEADVVTYTALISG 359
Query: 341 LCKNGQDADACELLEEMLGRN-----------------------------------CHPD 365
CK G+ ++L+ M + C PD
Sbjct: 360 FCKWGKINRGYQILDAMKQKGHMPNQLTYLRILLAHEKKEELEECLELIESMRMVGCVPD 419
Query: 366 AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV- 424
Y + I +C++G+ +N+M P L T I G+ +A +Y
Sbjct: 420 LSIYNVVIRLACKLGEVKQGVQIWNEMEASDFSPELDTFVIMIHGFLGQGCLVEACEYFK 479
Query: 425 ------VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+L+ +Y +L +LL + MAK+V S ++ G N +
Sbjct: 480 EMIGRGLLTTPQYGILKELLNALL-----RGEKLGMAKDVWSCIVTKGCELNADAW 530
>gi|147828617|emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
Length = 477
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 1/184 (0%)
Query: 296 VSYYNILIKEMCRRCD-FKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
V+ N+LIK +C+ + EM GC P + TY ++ LC+ G+ +A EL
Sbjct: 155 VASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPHSYTYGTLIXGLCRLGKIGEAKELF 214
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
+EM + C P +TY I C+ D A +M +G++P + T+++ + G+
Sbjct: 215 KEMETKACSPTVVTYXSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKS 274
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
A + + + + + + YS L K A +L M GLRP+ +Y
Sbjct: 275 GCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLY 334
Query: 475 RRVL 478
+++
Sbjct: 335 GKII 338
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 82/182 (45%), Gaps = 5/182 (2%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
LI LG AK + K+ E K V Y LI +C+ D LL EM
Sbjct: 196 TLIXGLCRLGKIGEAKELFKEMETKACSPTVVTYXSLIHGLCQSKDLDSAIRLLEEMASK 255
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G +P TY+ ++ CK+G + A ELL+ M+ R P+ ITY + C+ GK A
Sbjct: 256 GIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEA 315
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
++M +GL+P + I G+ ++ +A ++ S + + +SL +
Sbjct: 316 VEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRI 375
Query: 446 HD 447
H+
Sbjct: 376 HN 377
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 68/161 (42%), Gaps = 1/161 (0%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADAC-ELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
MR++G P + N ++ LCKN DA + EM R C P + TY I CR+G
Sbjct: 146 MREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPHSYTYGTLIXGLCRLG 205
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
K A F +M + P + T+ + I G + A + + A K + YS
Sbjct: 206 KIGEAKELFKEMETKACSPTVVTYXSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYS 265
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
L H K+ A +L M+ PN+ Y ++ L
Sbjct: 266 SLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGL 306
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 97/228 (42%), Gaps = 2/228 (0%)
Query: 257 LNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPR 316
+Q+ L+ G+ + E + L L + + + V YN +I MC+
Sbjct: 188 FDQISYGTLIHGLCKVGETRAALDLLQRVDGNL--VQPNVVMYNTIIDSMCKVKLVNEAF 245
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
DL EM G P +TY+ ++ C G+ DA +L +M+ N PD T+ I +
Sbjct: 246 DLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAF 305
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
C+ GK F+ M+K+G++P T+ + + GY + A A +
Sbjct: 306 CKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDI 365
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTS 484
YS++ + K A N+ EM + + P+V Y ++ L S
Sbjct: 366 QSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKS 413
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 100/216 (46%), Gaps = 13/216 (6%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTERKVSY------YNILIKEMCRRCDFKGPRDLLVEMRQV 325
LI F LGL A V K K+ Y + LIK +C + + ++ +
Sbjct: 126 LINCFCQLGLIPFAFSVFAKI-LKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVAL 184
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G ++Y ++ LCK G+ A +LL+ + G P+ + Y I C+V + A
Sbjct: 185 GFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEA 244
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA---YKYVVLSADKYKSSSNMLYSLL 442
F+ F++M+ +G+ P + T++A I G+ I + DA + ++L K + +++L
Sbjct: 245 FDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYT---FNIL 301
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ K+ K V MMK G++PN Y ++
Sbjct: 302 VNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLM 337
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 96/223 (43%), Gaps = 7/223 (3%)
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMC 307
+ + Q G + + +I F + ++ A + K+ RK V Y+ LI +
Sbjct: 352 IFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLS 411
Query: 308 RRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAI 367
+ L+ +M G P TYN +L LCK Q A LL ++ + P+
Sbjct: 412 KSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMY 471
Query: 368 TYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLS 427
TY I I C+ GK + A F ++ +G + T+ I+G+ + + +A +
Sbjct: 472 TYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKM 531
Query: 428 ADKYKSSSNMLYSLLA-SLHDKNNNPVMAKNVLSEMMKNGLRP 469
D Y ++ SL K+ N MA+ +L EM+ G+RP
Sbjct: 532 EDNGCIPDAKTYEIIILSLFKKDEND-MAEKLLREMIARGVRP 573
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 76/181 (41%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ C + + + M Q G P +Y+ ++ CK + +A L +EM
Sbjct: 333 YNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMH 392
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+N PD +TY I + G+ A +QM RG+ P + T+ + + ++ +
Sbjct: 393 RKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVD 452
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + DK + YS+L ++ A+ V ++ G NV Y ++
Sbjct: 453 KAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMI 512
Query: 479 K 479
+
Sbjct: 513 Q 513
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 50/102 (49%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ILIK +C+ + R + + G TY ++ C G +A LL +M
Sbjct: 473 YSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKME 532
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
C PDA TYEI I+ + + D+A +M+ RG++PR
Sbjct: 533 DNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPR 574
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 8/157 (5%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P +N +LG L K+ L ++M R P+ + I I C++G AF+
Sbjct: 83 PPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSV 142
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY----KYVVLSADKYKSSSNMLYSLLAS 444
F +++K G P T IKG + + + A+ K V L + S L L
Sbjct: 143 FAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCK 202
Query: 445 LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + A ++L + N ++PNV +Y ++ +
Sbjct: 203 VGETR----AALDLLQRVDGNLVQPNVVMYNTIIDSM 235
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 36/81 (44%)
Query: 288 VIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQD 347
++K V Y I+I+ C F LL +M GC P TY ++ L K ++
Sbjct: 497 LVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDEN 556
Query: 348 ADACELLEEMLGRNCHPDAIT 368
A +LL EM+ R P I
Sbjct: 557 DMAEKLLREMIARGVRPRQIA 577
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 114/246 (46%), Gaps = 11/246 (4%)
Query: 243 KALTKKGIW-RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNI 301
++L KG+ VV V G C + A I++ EM + TE VS
Sbjct: 284 RSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMD-----EMVELGFSPTEAAVSG--- 335
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL-EEMLGR 360
L+ + ++ +L+V++ + G P YN ++ LCK G D D ELL M
Sbjct: 336 LVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGG-DLDKAELLYSNMSLM 394
Query: 361 NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
N P+ ITY I I CR G+ DVA ++F++M++ G+ + + + I G F A
Sbjct: 395 NLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAA 454
Query: 421 YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKH 480
+ +K + ++ L S + K+ A + ++M+ NG+ PNV + ++
Sbjct: 455 ESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISG 514
Query: 481 LHTSHQ 486
L ++++
Sbjct: 515 LCSTNK 520
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 105/241 (43%), Gaps = 10/241 (4%)
Query: 263 SCLVSGVRALIEMFSVLGLY-EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
+ L+SG+ + +M L+ E+ + IK TE YN+LI+ CR +LL +
Sbjct: 509 TALISGLCSTNKMAEASELFDELVERKIKPTEVT---YNVLIEGYCRDGKIDKAFELLED 565
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M Q G P T TY ++ LC G+ + A + ++++ +N + + Y + C+ G+
Sbjct: 566 MHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGR 625
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSS---SNML 438
A + +M++RG+ L HA I G + D + L D + N++
Sbjct: 626 LMEALSASCEMIQRGINMDLVCHAVLIDGAL---KQPDRKTFFDLLKDMHDQGLRPDNVI 682
Query: 439 YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYS 498
Y+ + + K + A M+ PNV Y ++ L + + A L R
Sbjct: 683 YTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQ 742
Query: 499 S 499
+
Sbjct: 743 A 743
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 124/320 (38%), Gaps = 40/320 (12%)
Query: 198 CSLVIDNCGRLDDYETMRQLLNDF--------------------------NVYQVCLNEK 231
C+LV+ C RL +E QL+++ + Y++ +
Sbjct: 299 CTLVLGFC-RLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVG 357
Query: 232 AFGFLPVLISSKALT----KKGIWRVVEVL--NQVGGSCLVSGVR--ALIEMFSVLGLYE 283
FGF+P L AL K G E+L N + +G+ LI+ F G +
Sbjct: 358 RFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLD 417
Query: 284 MA-----KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
+A + + V YN LI C+ D L +EM G EP T+ ++
Sbjct: 418 VAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLI 477
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
CK+ Q A +L +M+ P+ T+ I C K A F+++V+R ++
Sbjct: 478 SGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIK 537
Query: 399 PRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNV 458
P T+ I+GY + + A++ + K Y L S AK+
Sbjct: 538 PTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDF 597
Query: 459 LSEMMKNGLRPNVSVYRRVL 478
+ ++ K ++ N Y +L
Sbjct: 598 IDDLHKQNVKLNEMCYSALL 617
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 5/143 (3%)
Query: 258 NQVGGSCLVSGVRALIEMFSVLGLYE-MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPR 316
N + C + + M +GL+ M K ++ T +NI+I+ C+ F
Sbjct: 749 NSITYGCFLDNLTKEGNMKEAIGLHHAMLKGLLANT----VTHNIIIRGFCKLGRFHEAT 804
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
+L EM + G P +TY+ ++ C++G + +L + ML R PD + Y + I
Sbjct: 805 KVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGC 864
Query: 377 CRVGKFDVAFNFFNQMVKRGLQP 399
C G+ D AF + M++RG+ P
Sbjct: 865 CVNGELDKAFELRDDMLRRGIIP 887
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 8/217 (3%)
Query: 265 LVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQ 324
L+SG +++ LY K + V + LI +C +L E+ +
Sbjct: 476 LISGYCKDLQVQKAFKLYN--KMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVE 533
Query: 325 VGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
+P +TYN ++ C++G+ A ELLE+M + PD TY I C G+
Sbjct: 534 RKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSK 593
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLAS 444
A +F + + K+ ++ ++A + GY R +A + S + + NM A
Sbjct: 594 AKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEA---LSASCEMIQRGINMDLVCHAV 650
Query: 445 LHD---KNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
L D K + ++L +M GLRP+ +Y ++
Sbjct: 651 LIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMI 687
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/233 (19%), Positives = 95/233 (40%), Gaps = 5/233 (2%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEM 306
++++ + ++G S + V L++ G + A ++ K R + YN LI +
Sbjct: 316 QLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSL 375
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
C+ D L M + P +TY+ ++ C++G+ A + M+
Sbjct: 376 CKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETV 435
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
Y I C+ G A + F +M +G++P T + I GY + + A+K
Sbjct: 436 YAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNK 495
Query: 427 SADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
D + + ++ L S N A + E+++ ++P Y +++
Sbjct: 496 MIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIE 548
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 73/176 (41%), Gaps = 1/176 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +I + FK + M C P +TY ++ LCK G+ A L + M
Sbjct: 683 YTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQ 742
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
N P++ITY F+ + G A + M+K GL TH I+G+ R+
Sbjct: 743 AANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLK-GLLANTVTHNIIIRGFCKLGRFH 801
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+A K + + + YS L + ++ N + + M+ GL P++ Y
Sbjct: 802 EATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAY 857
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%)
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN 390
T+T+N ++ CK G+ +A ++L EM PD +TY I CR G + ++
Sbjct: 784 TVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWD 843
Query: 391 QMVKRGLQPRLATHAAFIKG 410
M+ RGL+P L + I G
Sbjct: 844 TMLNRGLEPDLVAYNLLIYG 863
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 13/186 (6%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ +LI ++ D K DLL +M G P + Y ++ K G A E + M+
Sbjct: 648 HAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMV 707
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C P+ +TY + C+ G+ D A F +M + P T+ F+ +
Sbjct: 708 TEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMK 767
Query: 419 DA--YKYVVLSADKYKSSSNML----YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
+A + +L + ++ + + L H+ A VLSEM +NG+ P+
Sbjct: 768 EAIGLHHAMLKGLLANTVTHNIIIRGFCKLGRFHE-------ATKVLSEMTENGIFPDCV 820
Query: 473 VYRRVL 478
Y ++
Sbjct: 821 TYSTLI 826
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Query: 272 LIEMFSVLG-LYEMAKYVIKKTERKV----SYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
+I F LG +E K + + TE + Y+ LI E CR + L M G
Sbjct: 790 IIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRG 849
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPD 365
EP + YN ++ C NG+ A EL ++ML R PD
Sbjct: 850 LEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPD 888
>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 808
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 75/158 (47%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M + G P YN ++ LCKNG+ LL EML RN PD + + R G
Sbjct: 436 KMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNG 495
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+ D A F ++++G+ P + + A IKG+ F + DA + + + + YS
Sbjct: 496 ELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYS 555
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ + K ++ A + +MMK+ +PNV Y ++
Sbjct: 556 TVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLI 593
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 81/218 (37%), Gaps = 35/218 (16%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y LI C+ +F+ LL EM G +N V+ K G A E +
Sbjct: 271 VETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMR 330
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL------------------ 397
M C PD TY I +SC+ G+ A F + +RGL
Sbjct: 331 RMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQG 390
Query: 398 -----------------QPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+P L ++ AFI G + + A +K +Y+
Sbjct: 391 DYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYN 450
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+L S KN K +LSEM+ ++P+V V+ ++
Sbjct: 451 VLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLM 488
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 89/210 (42%), Gaps = 7/210 (3%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERKVSY-----YNILIKEMCRRCDFKGPRDLLVEMRQV 325
A I V G ++A V +K K + YN+L+ +C+ F + LL EM
Sbjct: 416 AFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDR 475
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
+P + ++ +NG+ +A ++ + ++ + P + Y I C+ GK A
Sbjct: 476 NVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDA 535
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML-YSLLAS 444
+ N+M P T++ I GY + A K + K+K N++ Y+ L +
Sbjct: 536 LSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALK-MFGQMMKHKFKPNVITYTSLIN 594
Query: 445 LHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
K + + A+ V M L PNV Y
Sbjct: 595 GFCKKADMIRAEKVFRGMKSFDLVPNVVTY 624
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 12/162 (7%)
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH--PDAITYEIFIVYSCRVGKFD 383
G +P + YN ++ CK G+ DA L +M +N H PD TY I +
Sbjct: 511 GVDPGIVGYNAMIKGFCKFGKMTDALSCLNKM--KNVHHAPDEYTYSTVIDGYVKQHDMS 568
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGY---FIFYRYEDAYKYVVLSADKYKSSSNML-Y 439
A F QM+K +P + T+ + I G+ R E ++ + N++ Y
Sbjct: 569 SALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFR----GMKSFDLVPNVVTY 624
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ L K P A ++ M+ NG PN + + ++ L
Sbjct: 625 TTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGL 666
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 68/178 (38%), Gaps = 14/178 (7%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
+I++K +C + R L+ + GC P + YN ++ CK G A L+E+
Sbjct: 205 SIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKM 264
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
+ P TY I C+ G+F+ +M RGL + I F
Sbjct: 265 KGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEF------- 317
Query: 420 AYKYVVLSADKYKSSSNM-------LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
Y V +A+ + + M Y+ + + K A L + + GL PN
Sbjct: 318 KYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPN 375
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 1/136 (0%)
Query: 286 KYVIKK-TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKN 344
K +I+K + + YN +IK C+ L +M+ V P TY+ V+ K
Sbjct: 505 KVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQ 564
Query: 345 GQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
+ A ++ +M+ P+ ITY I C+ A F M L P + T+
Sbjct: 565 HDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTY 624
Query: 405 AAFIKGYFIFYRYEDA 420
+ G+F + E A
Sbjct: 625 TTLVGGFFKAGKPEKA 640
>gi|414591141|tpg|DAA41712.1| TPA: hypothetical protein ZEAMMB73_063178 [Zea mays]
Length = 374
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 91/198 (45%)
Query: 292 TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADAC 351
E + YN L +CR + LL M ++G P +TY ++ + CK+G +A
Sbjct: 174 VELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEAR 233
Query: 352 ELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
L EM + P +TY + I + G A F +M K+G P + T+A+ + G+
Sbjct: 234 RLFREMAEKGATPSVVTYNVMIHGYAKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGH 293
Query: 412 FIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
+ + + A K + + + Y+ L S K A + +M+K GL P+
Sbjct: 294 CVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDD 353
Query: 472 SVYRRVLKHLHTSHQEHM 489
S+Y ++ LHT +++ +
Sbjct: 354 SLYSALVGSLHTDNRKDV 371
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 125/325 (38%), Gaps = 38/325 (11%)
Query: 199 SLVIDN---CGRLDDYETMRQLLNDFNVYQVCLNEKAFG-FLPVLISSKALTKKGIWRVV 254
S+V+D GR+DD R+LL+D + V LN + L + K + + ++
Sbjct: 18 SVVVDGLCKSGRVDD---ARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGR--VQEIL 72
Query: 255 EVLNQVG-----------------GSCLVSGVR-------ALIEMFSVLGLYEMAKYVIK 290
E++ G C+ +GV LI F +G E A+ ++
Sbjct: 73 EIMENEGIEATVGDGTCGGPPKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLA 132
Query: 291 KTERKVS-----YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNG 345
+ + +N +I CR+ + M ++G E TYN + LC+
Sbjct: 133 DMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVN 192
Query: 346 QDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
+ +A LL M+ P+ +TY I C+ G A F +M ++G P + T+
Sbjct: 193 RLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYN 252
Query: 406 AFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKN 465
I GY +A ++ K Y+ L H N +A + EM +
Sbjct: 253 VMIHGYAKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQR 312
Query: 466 GLRPNVSVYRRVLKHLHTSHQEHMA 490
G PNV Y ++ L + A
Sbjct: 313 GTEPNVVAYTALISGLAKEGRSEAA 337
>gi|410109883|gb|AFV61021.1| pentatricopeptide repeat-containing protein 11, partial
[Burroughsia fastigiata]
Length = 431
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 88/186 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ +L EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 212 VYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 271
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G + A + ++M +GL+P T+ I G
Sbjct: 272 QMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEG 331
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ A+++ + ++ Y+ L S + V A+ ++ EM+ GL+P+ Y
Sbjct: 332 DLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSVGLKPDTGTYT 391
Query: 476 RVLKHL 481
++ +
Sbjct: 392 MIINEV 397
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 52/112 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ R D L M G P TY+ ++ LCK + A EL +EML
Sbjct: 180 YNTLMNGYIRLGDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEML 239
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ P+ +T+ I C+ G+ D+A + QM+ + L P L T+ I G
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYG 291
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 81/188 (43%), Gaps = 14/188 (7%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL C+ D + + + + + G P ++YN ++ + G + +L M
Sbjct: 144 FFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFKLKSAM 203
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
PD TY + I C+ K D A F++M+ +GL P T I G+ R
Sbjct: 204 HASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR- 262
Query: 418 EDAYKYVVLSADKYKS--SSNML-----YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
V L+ + YK S ++L Y+ L K + A +++ EM GL+P+
Sbjct: 263 ------VDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPD 316
Query: 471 VSVYRRVL 478
Y ++
Sbjct: 317 KITYTTLI 324
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 53/147 (36%), Gaps = 35/147 (23%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL-------------------- 338
YN LI +C++ D DL+ EM G +P +TY ++
Sbjct: 285 YNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMI 344
Query: 339 ---------------GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
LC+ G+ DA +++ EML PD TY + I C+ G
Sbjct: 345 QENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSVGLKPDTGTYTMIINEVCKKGDVG 404
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKG 410
+M G P + T+ + G
Sbjct: 405 KGSKLLKEMQXDGHAPSVVTYNVLMNG 431
>gi|413919532|gb|AFW59464.1| hypothetical protein ZEAMMB73_836837 [Zea mays]
Length = 365
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 78/180 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+NIL+K +C+ F LL EM + GC+P TY+ + LC+ Q A EL E M
Sbjct: 180 FNILVKGLCQYGKFDEAISLLHEMPKQGCQPNATTYSTFMHFLCQRSQVDKAFELFERMR 239
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
++ D + Y I I CR + AF+ F M G P T+ + G +
Sbjct: 240 KQDIAADTVVYNILISGLCRDERVTEAFDLFKSMTSEGCCPNSGTYQVLLDGLISLGKLF 299
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A V + + S Y LL ++ A VL +M+ G P + + ++L
Sbjct: 300 EAKSLVCTMSTEGVRPSFQSYKLLIDGLCSDDCVGDAHLVLKQMVGQGFVPRMGTWTKLL 359
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 71/158 (44%)
Query: 324 QVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
++G T ++N ++ LC+ G+ +A LL EM + C P+A TY F+ + C+ + D
Sbjct: 170 RLGVTLDTCSFNILVKGLCQYGKFDEAISLLHEMPKQGCQPNATTYSTFMHFLCQRSQVD 229
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
AF F +M K+ + + I G R +A+ + ++ Y +L
Sbjct: 230 KAFELFERMRKQDIAADTVVYNILISGLCRDERVTEAFDLFKSMTSEGCCPNSGTYQVLL 289
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
AK+++ M G+RP+ Y+ ++ L
Sbjct: 290 DGLISLGKLFEAKSLVCTMSTEGVRPSFQSYKLLIDGL 327
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 4/167 (2%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
D L M C P T T+NYVL +L Q E+ D ++ I +
Sbjct: 128 DTLFAMPGYNCWPSTKTFNYVLHMLVCKRQYEVVHEVYSSAPRLGVTLDTCSFNILVKGL 187
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR--YEDAYKYVVLSADKYKSS 434
C+ GKFD A + ++M K+G QP T++ F+ +F+ R + A++ + ++
Sbjct: 188 CQYGKFDEAISLLHEMPKQGCQPNATTYSTFM--HFLCQRSQVDKAFELFERMRKQDIAA 245
Query: 435 SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
++Y++L S ++ A ++ M G PN Y+ +L L
Sbjct: 246 DTVVYNILISGLCRDERVTEAFDLFKSMTSEGCCPNSGTYQVLLDGL 292
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 47/116 (40%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNILI +CR DL M GC P + TY +L L G+ +A L+ M
Sbjct: 250 YNILISGLCRDERVTEAFDLFKSMTSEGCCPNSGTYQVLLDGLISLGKLFEAKSLVCTMS 309
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
P +Y++ I C A QMV +G PR+ T + F F
Sbjct: 310 TEGVRPSFQSYKLLIDGLCSDDCVGDAHLVLKQMVGQGFVPRMGTWTKLLTSMFKF 365
>gi|357129559|ref|XP_003566429.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Brachypodium distachyon]
Length = 461
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 6/149 (4%)
Query: 269 VRALIEMF---SVLGLYEMAKYVIKKTERKVSYYNILIKEMCR-RCDFKGPRDLLVEMRQ 324
VRAL + V+GL E K +R V +N +I C D +L +M++
Sbjct: 263 VRALFRVGRKGEVVGLLEEMKGRGIAVDRVV--HNAMIAGFCEDEMDLDAAFVVLDDMQK 320
Query: 325 VGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
GC+ T++YN ++ LCK G+ DA EL+E+M R C PD +TY + C VG+F
Sbjct: 321 SGCKADTVSYNTLVAGLCKLGRWRDANELVEDMPRRGCSPDVVTYRMLFDGMCAVGEFHE 380
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
A ++MV +G P F++G I
Sbjct: 381 ANQVLDEMVFKGFAPSKDGVKRFVQGIEI 409
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 1/104 (0%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADAC-ELLEEMLGRNCHPDAITYEIFIVYS 376
LL EM+ G + +N ++ C++ D DA +L++M C D ++Y +
Sbjct: 278 LLEEMKGRGIAVDRVVHNAMIAGFCEDEMDLDAAFVVLDDMQKSGCKADTVSYNTLVAGL 337
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
C++G++ A M +RG P + T+ G + +A
Sbjct: 338 CKLGRWRDANELVEDMPRRGCSPDVVTYRMLFDGMCAVGEFHEA 381
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 81/210 (38%), Gaps = 7/210 (3%)
Query: 286 KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM-RQVGCEPITLTYNYVLGVLCKN 344
+ V ++ V + L+ C DL M RQ P Y ++ LC++
Sbjct: 174 EMVQRRIAPTVVTFGTLVAAFCSSGRLDEAFDLKEAMARQYNVRPNAHVYASLMKGLCQS 233
Query: 345 GQDADACELLEEMLGR-NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
G +A L EEM G D+ Y + RVG+ +M RG+
Sbjct: 234 GDADNAVRLKEEMAGNAELGLDSAIYATLVRALFRVGRKGEVVGLLEEMKGRGIAVDRVV 293
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKS---SSNMLYSLLASLHDKNNNPVMAKNVLS 460
H A I G+ DA +VVL D KS + + Y+ L + K A ++
Sbjct: 294 HNAMIAGFCEDEMDLDA-AFVVLD-DMQKSGCKADTVSYNTLVAGLCKLGRWRDANELVE 351
Query: 461 EMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
+M + G P+V YR + + + H A
Sbjct: 352 DMPRRGCSPDVVTYRMLFDGMCAVGEFHEA 381
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
R P TYN ++ +G A L +EM+ R P +T+ + C G+
Sbjct: 141 RDADVSPDACTYNILMRAAAASGSVDHARLLFDEMVQRRIAPTVVTFGTLVAAFCSSGRL 200
Query: 383 DVAFNFFNQMVKR-GLQPRLATHAAFIKG 410
D AF+ M ++ ++P +A+ +KG
Sbjct: 201 DEAFDLKEAMARQYNVRPNAHVYASLMKG 229
>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
Length = 807
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 89/189 (47%), Gaps = 3/189 (1%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
+ + V KK KV Y+ +I +CR + + M GC+P YN ++ LCK
Sbjct: 421 LEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCK 480
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
G+ DA ++EM R C PD +TY IV CR + D A + + + +++G++ +
Sbjct: 481 TGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETS 540
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
I + + + V+ + + S + Y+ + K NN A+ +L +M+
Sbjct: 541 CNVVIASLRCLEQAQRVLRVVLATGN---SPTAFFYATVIESLCKENNLAEARQLLEDMI 597
Query: 464 KNGLRPNVS 472
G++P+ S
Sbjct: 598 GAGIKPDGS 606
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 64/147 (43%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI + L +EM G P +TY+ ++ LC G+ ++A LE
Sbjct: 363 VVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLE 422
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM+G+ P Y I CR G+ D A F+ MV G QP LA + + I G
Sbjct: 423 EMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTG 482
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLL 442
R DA V ++ S + Y L
Sbjct: 483 RLCDAKLRVKEMTERGCSPDGVTYGTL 509
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 86/193 (44%), Gaps = 8/193 (4%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N++I + RC + R L V + G P Y V+ LCK A+A +LLE+M+G
Sbjct: 542 NVVIASL--RCLEQAQRVLRVVL-ATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIG 598
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
PD T + + CR K VA F +MV+ G +P + T++ + F + +
Sbjct: 599 AGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSE 658
Query: 420 AYKYVVLSADKYKSS---SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
A +VVL +S + Y L + + + A+NVL E+ ++ Y
Sbjct: 659 A--HVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNT 716
Query: 477 VLKHLHTSHQEHM 489
+LK L + M
Sbjct: 717 LLKGLFRTRNLQM 729
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 1/113 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMR-QVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
Y+ILI +CR RDLL +R + C P ++YN ++ K + DA +L EM
Sbjct: 330 YDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEM 389
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ HPD +TY I C G+ A ++ +MV + + P++ +++ I G
Sbjct: 390 VTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISG 442
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 83/212 (39%), Gaps = 36/212 (16%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +I C+ D LL +M++ G + LTYN ++ C+ + A ELLEEM
Sbjct: 260 YTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMK 319
Query: 359 GRNCHPDAITYEIFIVYSCR------------------------------------VGKF 382
+ PD TY+I I CR +
Sbjct: 320 SNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARV 379
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
+ A+ F +MV G P + T++ I+G R +A+ Y+ K +YS +
Sbjct: 380 NDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSV 439
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
S + A V M+ NG +PN++VY
Sbjct: 440 ISGLCRAGELDAASTVFDSMVANGCQPNLAVY 471
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 63/154 (40%), Gaps = 1/154 (0%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P Y V+G CK G A LLE+M + D +TY I CR+ + D A+
Sbjct: 255 PTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYEL 314
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML-YSLLASLHD 447
+M P + T+ I G R +A + ++ + N++ Y+ L
Sbjct: 315 LEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFS 374
Query: 448 KNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K A + EM+ G P+V Y +++ L
Sbjct: 375 KAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGL 408
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 298 YYNILIK-----EMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
+Y LI+ E R K P++L+ P ++TY ++ LC G+ AC
Sbjct: 96 FYEALIRTGQCEEAYRLFKEKWPQELI---------PDSITYGILIRGLCNFGKLKLACS 146
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
L EEM+ R P +T + + C+ G ++A +F +M P AT I G F
Sbjct: 147 LYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSS---IPCAATWTILIDGLF 203
Query: 413 IFYRYEDAYKYVVLSADKYKSSS---NMLYSLLASLHDKNNNPVMAKNVLSEM 462
R ++A Y ++ K ++ N Y+++ + K A+ VL EM
Sbjct: 204 RAIRVDEACYYF----EEMKHTAIPNNWTYTVVINGLVKAGKVAEAERVLQEM 252
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%)
Query: 333 TYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
TYN L + GQ +A L +E + PD+ITY I I C GK +A + + +M
Sbjct: 92 TYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYEEM 151
Query: 393 VKRGLQPRLAT 403
V RGL+P + T
Sbjct: 152 VDRGLRPVVLT 162
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 71/178 (39%), Gaps = 1/178 (0%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
+Y +I+ +C+ + R LL +M G +P T + ++G +C+ + A LEEM
Sbjct: 572 FYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEM 631
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR-GLQPRLATHAAFIKGYFIFYR 416
+ P TY + + GK A +++ P + I Y +
Sbjct: 632 VRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGLIAAYSNQDQ 691
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
E+A + K+ S + Y+ L + N M +L EM +N N + +
Sbjct: 692 VEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTRNLQMVYELLREMKRNEFVVNEATF 749
Score = 45.4 bits (106), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 89/202 (44%), Gaps = 4/202 (1%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
S + L+ MCR+ L EM ++G +P TY+ +L L K G+ ++A +L
Sbjct: 606 STVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRR 665
Query: 357 MLGR-NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM-VKRGLQPRLATHAAFIKGYFIF 414
++ +C PD + Y I + + A N ++ K G+Q +A + +KG F
Sbjct: 666 LISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVA-YNTLLKGLFRT 724
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ Y+ + + +++L + A VLSE MK L P+ ++
Sbjct: 725 RNLQMVYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSE-MKKVLTPSAAII 783
Query: 475 RRVLKHLHTSHQEHMAKCLSSR 496
+ ++ L + +E +K L R
Sbjct: 784 KFLVDELARAEREQESKDLVKR 805
>gi|255661014|gb|ACU25676.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 376
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 92/184 (50%), Gaps = 2/184 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI + F+ +L EM P +TY+ ++ LCK + +A +L++EML
Sbjct: 167 YNALINGLVGASKFEDAIRVLREMGTTHFSPTVVTYSTLINGLCKGERFGEAYDLVKEML 226
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ +P ITY + I C K + AF +NQ++ +G +P + H I G + +
Sbjct: 227 DKGLNPSVITYSLLIKGLCLDCKVEKAFQLWNQVISKGFKPDVQMHNIMIHGLCSVGKMQ 286
Query: 419 DAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
A + + +++ + N++ ++ L K+ + A + + +M+NGL+P++ Y
Sbjct: 287 LALS-LYFNMNRWDCAPNLVTHNTLMEGFYKDGDFRNALVIWARIMRNGLQPDIISYNIT 345
Query: 478 LKHL 481
LK L
Sbjct: 346 LKGL 349
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%)
Query: 282 YEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+++ + + ++ R VS +NI+++ + + M++ G ++TY ++
Sbjct: 45 FKLWELMGREGSRSVSSFNIMMRGLFDNAKVDEVISIWELMKESGYVEDSITYGILVHGF 104
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
CKNG + +LE + DA Y I C+ K D A + N M+K G +P
Sbjct: 105 CKNGYLNKSLHVLEIAERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNA 164
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
+ A I G ++EDA + + + S + + YS L + K A +++ E
Sbjct: 165 HVYNALINGLVGASKFEDAIRVLREMGTTHFSPTVVTYSTLINGLCKGERFGEAYDLVKE 224
Query: 462 MMKNGLRPNVSVYRRVLKHL 481
M+ GL P+V Y ++K L
Sbjct: 225 MLDKGLNPSVITYSLLIKGL 244
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 102/235 (43%), Gaps = 7/235 (2%)
Query: 250 IWRVVEVLNQVGGSCLVSGVRALIE----MFSVLGLYEMAKYV-IKKTERKVSYYNILIK 304
+WR+ E + G S V LI+ +L EM + +K V Y ILI+
Sbjct: 166 LWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIR 225
Query: 305 EMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHP 364
+C + + MR+VG P TYN ++ CK A L ++MLG P
Sbjct: 226 GLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVP 285
Query: 365 DAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV 424
D +T+ I I C+ G+ A N F M+K + P +A + + I Y +A +
Sbjct: 286 DVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMA-L 344
Query: 425 VLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
L ++++ S ++ YS+L + A N+ +M K G+ N Y ++
Sbjct: 345 FLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLI 399
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 4/207 (1%)
Query: 265 LVSGVRALIEMFSVLGLY-EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMR 323
L+ G+ EM + L+ M K+ + ++ YN LI C+ D L +E+
Sbjct: 293 LIDGLCKFGEMKAARNLFVNMIKFSVTPN---IAVYNSLIDAYCKVGDVSEAMALFLELE 349
Query: 324 QVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
+ P TY+ ++ LC + +A + E+M +++TY I C+ GK D
Sbjct: 350 RFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMD 409
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
A +QM + G++P + T + I GY + A K S + Y+ +
Sbjct: 410 KALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMI 469
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPN 470
H K + A + S+M+ NG+ PN
Sbjct: 470 DGHCKYGSMKEALKLYSDMLDNGITPN 496
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 81/188 (43%), Gaps = 20/188 (10%)
Query: 258 NQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRD 317
N + S L+ G + + + +G+Y ++ VIK V Y +I C+ K
Sbjct: 426 NVITFSTLIDGYCKIRNLQAAMGIY--SEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALK 483
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML---GRNCHPDA-------- 366
L +M G P T + +L LCK+G+ +DA EL E + C+ DA
Sbjct: 484 LYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLT 543
Query: 367 --ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV 424
+ Y I C+ G+F A F+ M + GLQP + ++G F + Y +
Sbjct: 544 NHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLF-----QVKYILM 598
Query: 425 VLSADKYK 432
+L AD K
Sbjct: 599 MLHADMLK 606
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 81/196 (41%), Gaps = 13/196 (6%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI C+ ++ +M + G EP +T++ ++ CK A + EM+
Sbjct: 395 YNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMV 454
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
++ PD +TY I C+ G A ++ M+ G+ P T + + G +
Sbjct: 455 IKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKIS 514
Query: 419 DAYKYVV-----------LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNV--LSEMMKN 465
DA + + A K S + A +H + +K V S+M +
Sbjct: 515 DALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRY 574
Query: 466 GLRPNVSVYRRVLKHL 481
GL+P+ +Y +L+ L
Sbjct: 575 GLQPDEVIYVVMLRGL 590
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 49/126 (38%), Gaps = 10/126 (7%)
Query: 292 TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADAC 351
E V ++ LI C+ + + + EM P +TY ++ CK G +A
Sbjct: 423 VEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEAL 482
Query: 352 ELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK----------RGLQPRL 401
+L +ML P+ T + C+ GK A F + ++ G +P L
Sbjct: 483 KLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSL 542
Query: 402 ATHAAF 407
H A+
Sbjct: 543 TNHVAY 548
>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
Length = 794
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 81/183 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+L+ +C++ + EM G P Y +L LC G+ +A +LL M
Sbjct: 210 YNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMK 269
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C PD +TY F+ C+VG+ + AF + G L ++ I G F R++
Sbjct: 270 DKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFD 329
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ + Y ++ S +LY+++ + A + L M K G P+ Y VL
Sbjct: 330 EGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVL 389
Query: 479 KHL 481
K L
Sbjct: 390 KVL 392
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 103/242 (42%), Gaps = 31/242 (12%)
Query: 261 GGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRD--- 317
G SCL+ G +F E Y ER +S +L M R C G +
Sbjct: 314 GYSCLIDG------LFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDAL 367
Query: 318 -LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
L M++ G P T YN VL VLC +G A L EML N D+ T I I
Sbjct: 368 SFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGL 427
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA---------------Y 421
C+ G D A F++M + G P + T+ A I G++ R E+A +
Sbjct: 428 CKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLF 487
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHD--KNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
+ L A++ + S SL +HD ++ + A +L ++ +G+ P+V Y ++
Sbjct: 488 LRLTLGANQVRDSE----SLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLIN 543
Query: 480 HL 481
L
Sbjct: 544 GL 545
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 51/108 (47%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M GC P TYN ++ LCK G DA ++ +EML R P+ Y + + C GK
Sbjct: 198 MVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGK 257
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSAD 429
D A M +G P T+ AF+ G R +A++ +V+ D
Sbjct: 258 IDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQD 305
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 72/172 (41%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y +L+ +C LL M+ GC P +TYN L LCK G+ +A + L
Sbjct: 242 VKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLV 301
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ Y I + +FD F ++ M++R + P + + I+G
Sbjct: 302 MLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAG 361
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
R EDA ++ + K Y+ + + + + A + SEM++N L
Sbjct: 362 RIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNL 413
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 63/152 (41%), Gaps = 18/152 (11%)
Query: 283 EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEP-----ITLTYNYV 337
EM ++ T V YN LI R + R L +M ++G P +TL N V
Sbjct: 442 EMGEHGCDPT---VMTYNALIDGFYREGRLEEARMLFHKM-EMGNNPSLFLRLTLGANQV 497
Query: 338 ---------LGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
+ +C++GQ A +LL ++ PD +TY I C+ D A
Sbjct: 498 RDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRL 557
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
F ++ +G+ P T+ I G +R DA
Sbjct: 558 FKELQLKGISPDEITYGTLIDGLLRAHRENDA 589
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 102/254 (40%), Gaps = 25/254 (9%)
Query: 176 SALCFLKYMRE--IMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAF 233
AL FL M++ +P+ + + + ++ D+ G L+ T+R + N+ L+
Sbjct: 365 DALSFLDVMKKKGFVPDTFCYNTVLKVLCDH-GDLERAHTLRSEMLQNNL---VLDSTTQ 420
Query: 234 GFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTE 293
+ + + L + + ++ + + + G V ALI+ F G E A+ + K E
Sbjct: 421 TIMICGLCKRGLVDEAM-QIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKME 479
Query: 294 ------------------RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYN 335
R L+ +MC+ LL + G P +TYN
Sbjct: 480 MGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYN 539
Query: 336 YVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR 395
++ LCK A L +E+ + PD ITY I R + + A F +++
Sbjct: 540 TLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQS 599
Query: 396 GLQPRLATHAAFIK 409
G P L+ + + ++
Sbjct: 600 GSSPSLSIYNSMMR 613
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 37/87 (42%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M + P YN +L L +G A L M+ C P+ TY + + C+ G
Sbjct: 163 MDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGM 222
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFI 408
A F++M+ RG+ P + + +
Sbjct: 223 AGDALKMFDEMLDRGIMPNVKIYTVLL 249
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 1/113 (0%)
Query: 278 VLGLYEMAKYVIKK-TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNY 336
VL Y++ + +I V YN LI +C+ + G L E++ G P +TY
Sbjct: 516 VLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGT 575
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFF 389
++ L + ++ DA L + +L P Y + CR+ K A N +
Sbjct: 576 LIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLW 628
>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
Length = 794
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 81/183 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+L+ +C++ + EM G P Y +L LC G+ +A +LL M
Sbjct: 210 YNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMK 269
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C PD +TY F+ C+VG+ + AF + G L ++ I G F R++
Sbjct: 270 DKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFD 329
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ + Y ++ S +LY+++ + A + L M K G P+ Y VL
Sbjct: 330 EGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVL 389
Query: 479 KHL 481
K L
Sbjct: 390 KVL 392
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 102/242 (42%), Gaps = 31/242 (12%)
Query: 261 GGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRD--- 317
G SCL+ G +F E Y ER +S +L M R C G +
Sbjct: 314 GYSCLIDG------LFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDAL 367
Query: 318 -LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
L M++ G P T YN VL VLC +G A L EML N D+ T I I
Sbjct: 368 SFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGL 427
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA---------------Y 421
C+ G D A F++M + G P + T+ A I G++ R E+A +
Sbjct: 428 CKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLF 487
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHD--KNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
+ L A++ S SL +HD ++ + A +L ++ +G+ P+V Y ++
Sbjct: 488 LRLTLGANQVCDSE----SLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLIN 543
Query: 480 HL 481
L
Sbjct: 544 GL 545
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 51/108 (47%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M GC P TYN ++ LCK G DA ++ +EML R P+ Y + + C GK
Sbjct: 198 MVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGK 257
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSAD 429
D A M +G P T+ AF+ G R +A++ +V+ D
Sbjct: 258 IDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQD 305
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 72/172 (41%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y +L+ +C LL M+ GC P +TYN L LCK G+ +A + L
Sbjct: 242 VKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLV 301
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ Y I + +FD F ++ M++R + P + + I+G
Sbjct: 302 MLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAG 361
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
R EDA ++ + K Y+ + + + + A + SEM++N L
Sbjct: 362 RIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNL 413
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 101/249 (40%), Gaps = 28/249 (11%)
Query: 176 SALCFLKYMRE--IMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAF 233
AL FL M++ +P+ + + + ++ D+ G L+ T+R + N+ L+
Sbjct: 365 DALSFLDVMKKKGFVPDTFCYNTVLKVLCDH-GDLERAHTLRSEMLQNNL---VLDSTTQ 420
Query: 234 GFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTE 293
+ + + L + + ++ + + + G V ALI+ F G E A+ + K E
Sbjct: 421 TIMICGLCKRGLVDEAM-QIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKME 479
Query: 294 --RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADAC 351
S + L + CD + R L+ +M C++GQ A
Sbjct: 480 MGNNPSLFLRLTLGANQVCDSESLRKLVHDM-------------------CQSGQVLKAY 520
Query: 352 ELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
+LL ++ PD +TY I C+ D A F ++ +G+ P T+ I G
Sbjct: 521 KLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGL 580
Query: 412 FIFYRYEDA 420
+R DA
Sbjct: 581 LRAHRENDA 589
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 37/87 (42%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M + P YN +L L +G A L M+ C P+ TY + + C+ G
Sbjct: 163 MDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGM 222
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFI 408
A F++M+ RG+ P + + +
Sbjct: 223 AGDALKMFDEMLDRGIMPNVKIYTVLL 249
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 1/113 (0%)
Query: 278 VLGLYEMAKYVIKK-TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNY 336
VL Y++ + +I V YN LI +C+ + G L E++ G P +TY
Sbjct: 516 VLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGT 575
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFF 389
++ L + ++ DA L + +L P Y + CR+ K A N +
Sbjct: 576 LIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLW 628
>gi|449441228|ref|XP_004138384.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01400,
mitochondrial-like [Cucumis sativus]
gi|449499186|ref|XP_004160743.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01400,
mitochondrial-like [Cucumis sativus]
Length = 482
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 60/122 (49%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ +CR+ + LL M+ GC P YN V+ C+ G+ DAC++LE+M
Sbjct: 285 YATLLNSLCRKKKLREAYKLLCRMKVKGCNPDIAHYNTVIMGFCREGRALDACKILEDMQ 344
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C P+ ++YE C G F++A + +M +G P + A +KG+ R
Sbjct: 345 SNGCLPNLVSYESLTNGLCDQGMFELAKGYVEEMTLKGFYPHFSVIHALVKGFHSIGRIH 404
Query: 419 DA 420
++
Sbjct: 405 ES 406
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 84/184 (45%), Gaps = 2/184 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y L++ +CR+ G DLL +M G P TL+Y +L LC+ + +A +LL
Sbjct: 247 VETYRTLMQGLCRKNQVNGAVDLLEDMLNKGYIPDTLSYATLLNSLCRKKKLREAYKLLC 306
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M + C+PD Y I+ CR G+ A M G P L ++ + G
Sbjct: 307 RMKVKGCNPDIAHYNTVIMGFCREGRALDACKILEDMQSNGCLPNLVSYESLTNGLCDQG 366
Query: 416 RYEDAYKYV-VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+E A YV ++ + +++++L+ H + +VL +M+K G P+ +
Sbjct: 367 MFELAKGYVEEMTLKGFYPHFSVIHALVKGFHSIGRIH-ESCSVLEDMLKRGKAPHSDTW 425
Query: 475 RRVL 478
++
Sbjct: 426 EIII 429
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 84/192 (43%), Gaps = 4/192 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNILI+ C + L +M + P TY ++ LC+ Q A +LLE+ML
Sbjct: 215 YNILIRAFCWNGNISIAYTLFNKMFERNVIPDVETYRTLMQGLCRKNQVNGAVDLLEDML 274
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD ++Y + CR K A+ +M +G P +A + I G+ R
Sbjct: 275 NKGYIPDTLSYATLLNSLCRKKKLREAYKLLCRMKVKGCNPDIAHYNTVIMGFCREGRAL 334
Query: 419 DAYKYVVLSADKYKSSSNML--YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
DA K ++ N++ SL L D+ +AK + EM G P+ SV
Sbjct: 335 DACK-ILEDMQSNGCLPNLVSYESLTNGLCDQGMFE-LAKGYVEEMTLKGFYPHFSVIHA 392
Query: 477 VLKHLHTSHQEH 488
++K H+ + H
Sbjct: 393 LVKGFHSIGRIH 404
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 65/158 (41%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
DL R G P T +YN ++ C NG + A L +M RN PD TY +
Sbjct: 198 DLFKNARHHGVLPNTKSYNILIRAFCWNGNISIAYTLFNKMFERNVIPDVETYRTLMQGL 257
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
CR + + A + M+ +G P ++A + + +AYK + K +
Sbjct: 258 CRKNQVNGAVDLLEDMLNKGYIPDTLSYATLLNSLCRKKKLREAYKLLCRMKVKGCNPDI 317
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
Y+ + + + A +L +M NG PN+ Y
Sbjct: 318 AHYNTVIMGFCREGRALDACKILEDMQSNGCLPNLVSY 355
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 49/122 (40%)
Query: 289 IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
+K +++YN +I CR +L +M+ GC P ++Y + LC G
Sbjct: 310 VKGCNPDIAHYNTVIMGFCREGRALDACKILEDMQSNGCLPNLVSYESLTNGLCDQGMFE 369
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
A +EEM + +P + +G+ + + M+KRG P T I
Sbjct: 370 LAKGYVEEMTLKGFYPHFSVIHALVKGFHSIGRIHESCSVLEDMLKRGKAPHSDTWEIII 429
Query: 409 KG 410
G
Sbjct: 430 SG 431
>gi|413945076|gb|AFW77725.1| ATP binding protein isoform 1 [Zea mays]
gi|413945077|gb|AFW77726.1| ATP binding protein isoform 2 [Zea mays]
gi|413945078|gb|AFW77727.1| ATP binding protein isoform 3 [Zea mays]
Length = 634
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 146/364 (40%), Gaps = 8/364 (2%)
Query: 121 AMVNGPYATPKQVSEIIELLRSG-DSETESKLLSMSVSLSNASVIEILRVLNSEKVSALC 179
A + P + + I +++ SG D+ E+ L ++S L A V+ +L +
Sbjct: 154 AAASNPEGVDRVCAAIADVVASGADANLEAALSALSPPLCEAVVLAVLHRFKHAHRPSYR 213
Query: 180 FLKYMREIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVL 239
F ++ + F + ++ G+ +E+M ++ + L+ AF
Sbjct: 214 FFRWA-TVSGGFTHTTITYCKMLHILGKTRQFESMVAMIQEMGKAGA-LSMDAFKVAIKS 271
Query: 240 ISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVS-- 297
++ K + V E++ + G V L+ + GL A+ V K + S
Sbjct: 272 FAAAGEIKNAV-GVFELMRKNGFDDGVESFNCLLVALAKEGLGREARQVFDKMHGQYSPD 330
Query: 298 --YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
Y L+ C + + EM + G +P + +N ++ L + + +A ++ E
Sbjct: 331 LRSYTALMLAWCNARNLVEAGRVWNEMLEKGMDPDVVVHNTMIEGLLRGQRRPEAVKMFE 390
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M + P+ TY + I C+ GK D+A F +M + QP +AT+ + GY
Sbjct: 391 LMKAKGPPPNVWTYTMLIRDHCKQGKMDMAMECFEEMQEAKCQPDVATYTCLLVGYGNAK 450
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ + + K Y+ L L N P A + +M+K GL P + Y
Sbjct: 451 QMDRVTAVLEEMTQKGCPPDARTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYN 510
Query: 476 RVLK 479
++K
Sbjct: 511 MMMK 514
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 83/209 (39%), Gaps = 40/209 (19%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
++E+ K K V Y +LI++ C++ + EM++ C+P TY +L V
Sbjct: 388 MFELMK--AKGPPPNVWTYTMLIRDHCKQGKMDMAMECFEEMQEAKCQPDVATYTCLL-V 444
Query: 341 LCKNGQDAD-ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
N + D +LEEM + C PDA TY I D A + +M+K+GL+P
Sbjct: 445 GYGNAKQMDRVTAVLEEMTQKGCPPDARTYNALIKLLTNRNMPDDAARIYKKMIKKGLEP 504
Query: 400 RLATHAAFIKGYFI------------------------------------FYRYEDAYKY 423
+ T+ +K YF+ R E+AYKY
Sbjct: 505 TIHTYNMMMKSYFVGDSNYAMGCAVWEEMHQRGICPDVNSYTVFINGHIRHGRPEEAYKY 564
Query: 424 VVLSADKYKSSSNMLYSLLASLHDKNNNP 452
+ +K + + Y+ A+ K P
Sbjct: 565 IEEMINKGMKAPQIDYNKFAADFSKAGKP 593
>gi|297849166|ref|XP_002892464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338306|gb|EFH68723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 555
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 83/184 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YNILI +C+ D +M + C P +TYN +LG + K G DA ELL
Sbjct: 345 VITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTLLGAMSKEGMVDDAIELLG 404
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ +C P ITY I R G A ++ M+ G+ P T + I G+
Sbjct: 405 LLKSTSCLPGLITYNSVIDGLARKGLMKKALELYHHMLDAGISPDDITRRSLIYGFCRAN 464
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E+A + + ++++ Y L+ K MA V+ M+ +G +P+ ++Y
Sbjct: 465 LVEEASQVLKETSNRGNGIRGSTYRLVIQGLCKKREMEMAIEVVEIMLTSGCKPDETIYT 524
Query: 476 RVLK 479
++K
Sbjct: 525 AIVK 528
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 76/179 (42%), Gaps = 13/179 (7%)
Query: 230 EKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVI 289
+KA L +++ S + + ++ +G C +R+ + + + L VI
Sbjct: 152 DKAMVILRIMVMSGGVPDTITYNMI-----IGNLCKKGHIRSALVLLEDMSLSGSPPDVI 206
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
YN +I+ M + + + + GC P +TY ++ ++C+ A
Sbjct: 207 T--------YNTVIRCMFDHGNAEQAIRFWKDQLRNGCPPYMITYTVLVELVCRYCGSAR 258
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
A ++LE+M C+PD +TY + Y+CR G + ++ GL+ T+ +
Sbjct: 259 AMDVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVALVIQHILSHGLELNTVTYNTLL 317
Score = 38.9 bits (89), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 47/112 (41%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I + R+ K +L M G P +T ++ C+ +A ++L+E
Sbjct: 418 YNSVIDGLARKGLMKKALELYHHMLDAGISPDDITRRSLIYGFCRANLVEEASQVLKETS 477
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
R TY + I C+ + ++A M+ G +P + A +KG
Sbjct: 478 NRGNGIRGSTYRLVIQGLCKKREMEMAIEVVEIMLTSGCKPDETIYTAIVKG 529
>gi|255548041|ref|XP_002515077.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545557|gb|EEF47061.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 262
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 62/122 (50%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ +CR+ + LL M+ GC P + YN ++ C+ G+ DA ++L +M
Sbjct: 67 YTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTIISGFCREGRAMDARKVLGDME 126
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C P+ ++Y + C G FD A ++ +M+ +G P + A +KG+ I + E
Sbjct: 127 CNGCLPNLVSYRTLVAGICDQGMFDEAKSYLEEMILKGFSPHFSVSHALVKGFCIVGKIE 186
Query: 419 DA 420
+A
Sbjct: 187 EA 188
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 61/138 (44%)
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
LC G+ + A +L +M R+ PD +Y I + CR + + A M+ +G P
Sbjct: 4 LCLTGELSVAYKLFNQMFKRDVLPDIESYRILMQGLCRRSQVNGAVGLLEDMLNKGFVPD 63
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
T+ + + +AYK + K + + Y+ + S + + A+ VL
Sbjct: 64 CLTYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTIISGFCREGRAMDARKVLG 123
Query: 461 EMMKNGLRPNVSVYRRVL 478
+M NG PN+ YR ++
Sbjct: 124 DMECNGCLPNLVSYRTLV 141
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 48/115 (41%)
Query: 289 IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
+K + +YN +I CR R +L +M GC P ++Y ++ +C G
Sbjct: 92 VKGCNPDIVHYNTIISGFCREGRAMDARKVLGDMECNGCLPNLVSYRTLVAGICDQGMFD 151
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
+A LEEM+ + P + C VGK + A ++K G P T
Sbjct: 152 EAKSYLEEMILKGFSPHFSVSHALVKGFCIVGKIEEACGVVEVLLKHGEVPHADT 206
>gi|218188821|gb|EEC71248.1| hypothetical protein OsI_03217 [Oryza sativa Indica Group]
Length = 571
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 2/186 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ YN+L+K C D P D V + + +P +YN V+ LC+ G+ +A +L
Sbjct: 173 TATYNVLVKAHC--SDAAVPIDDAVRVFRNIPKPDACSYNTVIDGLCRRGRLPEARDLFA 230
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM+ P +TY I + R FD A F++M +RG+ P + T+++ I G
Sbjct: 231 EMIANGTAPTVVTYTTLIHWLAREACFDDALKLFDEMARRGIMPNVVTYSSLIDGLCKGG 290
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R A + + + K + + YS + K A +L M G +P+ ++
Sbjct: 291 RAASAVELLDRMVKERKLPNTITYSSVIDGLCKEGCLGQAMEILDRMRLQGRKPDAGLFG 350
Query: 476 RVLKHL 481
+++ L
Sbjct: 351 KLIVGL 356
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 75/173 (43%), Gaps = 2/173 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I +CRR RDL EM G P +TY ++ L + DA +L +EM
Sbjct: 209 YNTVIDGLCRRGRLPEARDLFAEMIANGTAPTVVTYTTLIHWLAREACFDDALKLFDEMA 268
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R P+ +TY I C+ G+ A ++MVK P T+++ I G
Sbjct: 269 RRGIMPNVVTYSSLIDGLCKGGRAASAVELLDRMVKERKLPNTITYSSVIDGLCKEGCLG 328
Query: 419 DAYKYV-VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
A + + + K + + L+ L D + A N L EM G+RPN
Sbjct: 329 QAMEILDRMRLQGRKPDAGLFGKLIVGLCDAGRA-LEASNYLDEMNFAGIRPN 380
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 72/170 (42%), Gaps = 4/170 (2%)
Query: 285 AKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKN 344
A+ + T V Y LI + R F L EM + G P +TY+ ++ LCK
Sbjct: 230 AEMIANGTAPTVVTYTTLIHWLAREACFDDALKLFDEMARRGIMPNVVTYSSLIDGLCKG 289
Query: 345 GQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
G+ A A ELL+ M+ P+ ITY I C+ G A ++M +G +P
Sbjct: 290 GRAASAVELLDRMVKERKLPNTITYSSVIDGLCKEGCLGQAMEILDRMRLQGRKPDAGLF 349
Query: 405 AAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM 454
I G R +A Y+ D+ + L SLH + N+ V+
Sbjct: 350 GKLIVGLCDAGRALEASNYL----DEMNFAGIRPNRLTWSLHGRINDAVV 395
>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 543
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 98/233 (42%), Gaps = 7/233 (3%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKT--ERKVSYYNILIKEMCRR 309
RVVE L G S + ++ + G + A+ +I YN LI+ +C R
Sbjct: 117 RVVEAL---GPSATIITYNTMVNGYCRAGNIDAARRMIDSVPFAPDTFTYNPLIRALCVR 173
Query: 310 CDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITY 369
+ +M GC P +TY+ +L CK A LL+EM + C PD +TY
Sbjct: 174 GCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTY 233
Query: 370 EIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV-LSA 428
+ I C G A N + G +P T+ +K R+E+A K + + +
Sbjct: 234 NVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFS 293
Query: 429 DKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ +++ SL K A VL++M ++G P++ Y ++ L
Sbjct: 294 NDCAPDEVTFNAVITSLCQKGFVG-RATKVLAQMSEHGCTPDIITYSSIMDGL 345
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 86/203 (42%), Gaps = 32/203 (15%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K E + YN+LI MC + D +L + GC+P +TY VL LC + + +
Sbjct: 224 KGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEE 283
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A +LL +M +C PD +T+ I C+ G A QM + G P + T+++ +
Sbjct: 284 ADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMD 343
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM--------------- 454
G R ++A K +L LLA + KN P
Sbjct: 344 GLCKERRVDEAIK--------------LLKELLAEMVSKNCIPDQVTFNTIITSLCQKGL 389
Query: 455 ---AKNVLSEMMKNGLRPNVSVY 474
A V+ EM ++G P+++ Y
Sbjct: 390 FDRAIKVVDEMSEHGCIPDITTY 412
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 87/197 (44%), Gaps = 5/197 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADAC----ELL 354
+N +I +C++ +L +M + GC P +TY+ ++ LCK + +A ELL
Sbjct: 303 FNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELL 362
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI- 413
EM+ +NC PD +T+ I C+ G FD A ++M + G P + T+ + G+
Sbjct: 363 AEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCK 422
Query: 414 FYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
+ E+A + L Y LA + + A + + GL P+ +
Sbjct: 423 SCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKML 482
Query: 474 YRRVLKHLHTSHQEHMA 490
Y +L L + +A
Sbjct: 483 YNAILLGLCKKWRTDLA 499
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 99/263 (37%), Gaps = 56/263 (21%)
Query: 280 GLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
G + + K R N ++ + +R + G L+ + G +P + N ++
Sbjct: 45 GTAKWTRTPPKPPARSGGGANRRLRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIK 104
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDA--ITYEIFIVYSCRVGKFDV------------- 384
LC +G+ ADA E + E LG P A ITY + CR G D
Sbjct: 105 KLCADGRVADA-ERVVEALG----PSATIITYNTMVNGYCRAGNIDAARRMIDSVPFAPD 159
Query: 385 -------------------AFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV 425
A F+ M+ RG P + T++ + E YK V
Sbjct: 160 TFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATC----KESGYKQAV 215
Query: 426 LSADKYKSSS--------NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ D+ +S N+L + + S D A VL+ + G +P+ Y V
Sbjct: 216 VLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGE----ALKVLNSLPSYGCKPDAVTYTPV 271
Query: 478 LKHLHTSHQ-EHMAKCLSSRYSS 499
LK L +S + E K L+ +S+
Sbjct: 272 LKSLCSSERWEEADKLLTKMFSN 294
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 36/148 (24%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL-GVLCKNGQDADACELLEEM 357
+N +I +C++ F ++ EM + GC P TYN ++ G LCK+ + +A +LL M
Sbjct: 377 FNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLM 436
Query: 358 LGRNCHPDAITYE-----------------------------------IFIVYSCRVGKF 382
+ PD TY+ ++ C+ +
Sbjct: 437 VSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRT 496
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKG 410
D+A +FF MV G P +T+ ++G
Sbjct: 497 DLAIDFFAYMVSNGCMPDESTYIILVEG 524
>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
Length = 432
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 29/255 (11%)
Query: 234 GFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTE 293
G++P L+S A+ + G C + +E+F+ + + +
Sbjct: 197 GYVPTLVSFNAI--------------ITGLCRARRLADALEVFN--------EMIDRDFH 234
Query: 294 RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACEL 353
+ Y+++I +C+ + LL M GC P + Y ++ G+ A L
Sbjct: 235 PNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGL 294
Query: 354 LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
L M+ + C PD +TY + I C+VG+ D A F ++V P + T++A I GY
Sbjct: 295 LRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCR 354
Query: 414 FYRYEDAYKYVVLSADK--YKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
R ++ K + A + + + M++ L S+ D+N A + EM + G P+
Sbjct: 355 ASRVDEGGKVMREMACRPNVVTYNTMIWGL--SMVDRNEE---AYGMFREMSECGFVPDA 409
Query: 472 SVYRRVLKHLHTSHQ 486
YR + + L Q
Sbjct: 410 RTYRGLKRALRMIDQ 424
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 1/191 (0%)
Query: 285 AKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG-CEPITLTYNYVLGVLCK 343
A + + V Y LI +C+ DL +M G C P TYN ++ LCK
Sbjct: 85 ASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCK 144
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
+ A ++ E R+ PD +TY + ++G+ D A F QM + G P L +
Sbjct: 145 QDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVS 204
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
A I G R DA + D+ + + YS++ K++ A+ +L M+
Sbjct: 205 FNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMV 264
Query: 464 KNGLRPNVSVY 474
G RP++ Y
Sbjct: 265 SEGCRPDLVAY 275
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 90/209 (43%), Gaps = 5/209 (2%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
AL++ + A+ VI + ++ V YN L+ + + +M +
Sbjct: 137 ALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEE 196
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P +++N ++ LC+ + ADA E+ EM+ R+ HP+ +TY + I C+ + D A
Sbjct: 197 GYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEA 256
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
++MV G +P L + + G+ R + A + + + Y+++
Sbjct: 257 QQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDK 316
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
K A + E++ N PNV Y
Sbjct: 317 LCKVGRVDDAHEIFRELVANKCSPNVVTY 345
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 104/261 (39%), Gaps = 51/261 (19%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+LI+ C D LL EM G + T + +L LC+ G+ A A E + L
Sbjct: 28 YNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASL 87
Query: 359 G-RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR-GLQPRLATHAAFIKGYFIFYR 416
+ PD ++Y I C++G+ D AF+ F +MV G +P T+ A + G R
Sbjct: 88 ELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDR 147
Query: 417 YEDAYKYVVLSADKYKSSSNMLY--SLLASLH----------------DKNNNPVM---- 454
DA + V+ A K + +++ +L+A+L ++ P +
Sbjct: 148 L-DAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFN 206
Query: 455 --------------AKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSR---- 496
A V +EM+ PN+ Y V+ L S Q A+ L R
Sbjct: 207 AIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSE 266
Query: 497 --------YSSLSLGSSVEAR 509
Y+ L LG S R
Sbjct: 267 GCRPDLVAYTPLVLGFSAAGR 287
>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 647
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 99/244 (40%), Gaps = 8/244 (3%)
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDF 312
VV + G C V R E + L +A K++Y LI+ DF
Sbjct: 249 VVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVAP-------DKITYMT-LIQACYAEGDF 300
Query: 313 KGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIF 372
L EM + G E Y+ V+G LCK+G+ + + E M+ + C + Y
Sbjct: 301 DSCLGLYHEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTAL 360
Query: 373 IVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYK 432
I + + G A F +M K GL+P T+ + R ++A +Y+ + K
Sbjct: 361 IDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGV 420
Query: 433 SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKC 492
+ + M YS L K+ A+ + EM+K G P+ Y ++ L + A
Sbjct: 421 AVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALA 480
Query: 493 LSSR 496
LS R
Sbjct: 481 LSKR 484
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 94/232 (40%), Gaps = 10/232 (4%)
Query: 271 ALIEMFSVLGLYEMAKYVIKK-----TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
+LI+ F LG+ E +V ++ E + YN L+ + + + M
Sbjct: 184 SLIKSFGNLGMVEEVLWVWRRMKENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENG 243
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
P +TYN ++ C+ G+ A E L+ M RN PD ITY I G FD
Sbjct: 244 KIGPDVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSC 303
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
+++M ++GL+ ++ I G + + Y K ++ +Y+ L
Sbjct: 304 LGLYHEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDS 363
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ-----EHMAKC 492
+ K N A + M K GL P+ Y ++ L S + E+M C
Sbjct: 364 NAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFC 415
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 83/219 (37%), Gaps = 37/219 (16%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVE-MRQVGCEPITLTYNYVLGVLCKNGQDA 348
K + V+ Y LI + C G LL + M++ G EP +TY ++ LCK+G+
Sbjct: 348 KGCKANVAIYTALIDSNAK-CGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLD 406
Query: 349 DACELLE-----------------------------------EMLGRNCHPDAITYEIFI 373
+A E +E EM+ + C PD+ Y I
Sbjct: 407 EALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALI 466
Query: 374 VYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKS 433
+ GK D A +M G + T+ I G F +R E+A L DK +
Sbjct: 467 DALAKCGKIDEALALSKRMEVDGCDQTVYTYTILITGLFREHRNEEALTLWDLMIDKGIT 526
Query: 434 SSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
+ + L++ + A +L EM G+ P +
Sbjct: 527 PTAAAFRALSTGLCLSGKVARACKILDEMAPMGVIPETA 565
>gi|410109915|gb|AFV61037.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
brasiliensis]
Length = 427
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 85/183 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ +L EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 208 VYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 267
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
ML ++ PD ITY I C+ G A + ++M +GL+P T+ I G
Sbjct: 268 RMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKEG 327
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ A+++ + ++ Y+ L S + V A+ +L EM+ GL+PN Y
Sbjct: 328 DLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXRTYT 387
Query: 476 RVL 478
++
Sbjct: 388 MII 390
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 14/188 (7%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ C+ D + + + + + G P ++YN ++ + G + L M
Sbjct: 140 FFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAM 199
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
L PD TY + I C+ K D A F++M+ +GL P T I G+ R
Sbjct: 200 LASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR- 258
Query: 418 EDAYKYVVLSADKYKS--SSNML-----YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
V L+ + YK S ++L Y+ L K + A +++ EM GL+P+
Sbjct: 259 ------VDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPD 312
Query: 471 VSVYRRVL 478
Y ++
Sbjct: 313 KITYTTLI 320
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI +C+ +L EM VG +P TY ++ CK G +LL+EM
Sbjct: 351 YTALISGLCQEGRSVDAEKMLREMLSVGLKPNXRTYTMIINEFCKKGDVWKGSKLLKEM- 409
Query: 359 GRNCH-PDAITYEIFI 373
R+ H P +TY + +
Sbjct: 410 QRDGHVPSVVTYNVLM 425
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 52/96 (54%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
+L M GC P +TYN +L LCK + +A EL +M+ R C PD +TY +
Sbjct: 248 ELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGF 307
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
C VGK + A F++MV +G P + + +KG+F
Sbjct: 308 CNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFF 343
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 77/184 (41%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ILI C+ + L +M + C P TYN L L + G+ ADA + E
Sbjct: 157 VVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYE 216
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM+ C PD ITY I K D A F M+ RG +P T+ + G
Sbjct: 217 EMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKES 276
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ ++A++ ++ + Y+ L A V EM+ G P+V Y
Sbjct: 277 KPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYN 336
Query: 476 RVLK 479
+LK
Sbjct: 337 CLLK 340
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 98/241 (40%), Gaps = 12/241 (4%)
Query: 231 KAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIK 290
+AF ++S +++ V + V S L+ G + E+ LY+ + +
Sbjct: 139 QAFAIFSTMVSERSV----------VPDVVSYSILIDGFCKIDELGRAEKLYK--QMIDL 186
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
V+ YN + + R+ + + EM GC P +TY+ ++ + A
Sbjct: 187 NCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQA 246
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
EL E M+ R C P+A+TY + C+ K D A F +MV+RG P T+ + G
Sbjct: 247 HELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYG 306
Query: 411 YFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
+ + E A + K + Y+ L + P A+ + M+ +P+
Sbjct: 307 FCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPD 366
Query: 471 V 471
Sbjct: 367 T 367
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 55/122 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ +C+ +L +M + GC+P +TY +L C G+ A E+ +EM+
Sbjct: 265 YNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMV 324
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD + Y + R GK A F MV R +P +H I G R +
Sbjct: 325 SKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLD 384
Query: 419 DA 420
DA
Sbjct: 385 DA 386
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 70/150 (46%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P ++Y+ ++ CK + A +L ++M+ NC P+ TY F+ R G+ A
Sbjct: 155 PDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGV 214
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
+ +M+ G P + T++ I G+ + +++ A++ + + + Y+ L K
Sbjct: 215 YEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCK 274
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ P A + +M++ G P+ Y +L
Sbjct: 275 ESKPDEAHELFRKMVERGCDPDKVTYTTLL 304
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 4/157 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ C + ++ EM G +P + YN +L + G+ +A +L + M+
Sbjct: 300 YTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMV 359
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK-RGLQPRLATHAAFIKGYFIFYRY 417
R C PD +++ I I + + D A F +M + G P L T+ + I G R
Sbjct: 360 SRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRL 419
Query: 418 EDAYKYVVLSADKYKSSSN--MLYSLLASLHDKNNNP 452
+A K V D+ K S + LL +++ + P
Sbjct: 420 SEAMK-VFKEIDRLKLSPDPHAFNVLLEAMYAAGHKP 455
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 57/139 (41%), Gaps = 9/139 (6%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
G C V + +E+F + V K + V YN L+K R R L
Sbjct: 306 GFCNVGKIEQAVEVFD--------EMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQV 357
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM-LGRNCHPDAITYEIFIVYSCRVG 380
M C+P T+++N ++ L K + DA E+ E M C PD +TY I C
Sbjct: 358 MVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQ 417
Query: 381 KFDVAFNFFNQMVKRGLQP 399
+ A F ++ + L P
Sbjct: 418 RLSEAMKVFKEIDRLKLSP 436
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 86/190 (45%), Gaps = 1/190 (0%)
Query: 289 IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
+K R Y LI +C DL V+M+ C P TY ++ LC + + +
Sbjct: 281 LKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKS 340
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
+A L++EM + P+ TY + I C K + A QM+++GL P + T+ A I
Sbjct: 341 EALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALI 400
Query: 409 KGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLR 468
GY EDA V L + + Y+ L + K N A VL++M++ +
Sbjct: 401 NGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVH-KAMGVLNKMLERKVL 459
Query: 469 PNVSVYRRVL 478
P+V Y ++
Sbjct: 460 PDVVTYNSLI 469
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 92/196 (46%), Gaps = 6/196 (3%)
Query: 288 VIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLC 342
++K+ E K + Y +LI +C +C + R+LL +M + G P +TYN ++ C
Sbjct: 345 LVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYC 404
Query: 343 KNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLA 402
K G DA +++E M RN P+ TY I C+ A N+M++R + P +
Sbjct: 405 KRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCK-RNVHKAMGVLNKMLERKVLPDVV 463
Query: 403 THAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM 462
T+ + I G ++ AY+ + L D+ Y+ + K+ A ++ +
Sbjct: 464 TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSL 523
Query: 463 MKNGLRPNVSVYRRVL 478
+ + PNV +Y ++
Sbjct: 524 EQKDVIPNVVMYTALI 539
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 79/186 (42%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y LI C+ +L +M C P +LT+N ++ LC +G+ +A L E
Sbjct: 532 VVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEE 591
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M+ + P T I I + G FD A+ F QM+ G +P T+ FI+ Y
Sbjct: 592 KMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREG 651
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R +DA V + S YS L + A VL M G P+ +
Sbjct: 652 RLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFL 711
Query: 476 RVLKHL 481
++KHL
Sbjct: 712 SLIKHL 717
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 117/293 (39%), Gaps = 47/293 (16%)
Query: 234 GFLPVLISSKALT----KKG-IWRVVEVLNQVGGSCLVSGVRA---LIEMFSVLGLYEMA 285
G +P +I+ AL K+G I ++V+ + L R LI+ + +++
Sbjct: 388 GLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVHKAM 447
Query: 286 KYVIKKTERKV----SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+ K ERKV YN LI CR +F LL M G P TY ++ L
Sbjct: 448 GVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSL 507
Query: 342 CKNGQDADACEL-----------------------------------LEEMLGRNCHPDA 366
CK+ + +AC+L LE+ML +NC P++
Sbjct: 508 CKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNS 567
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
+T+ I C GK A +MVK LQP ++T I ++ AY+
Sbjct: 568 LTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQ 627
Query: 427 SADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
Y+ + + A++++++M +NG+ P++ Y ++K
Sbjct: 628 MLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIK 680
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI C+R D + EM GC + Y +++ LC + +A +L +M
Sbjct: 256 YTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMK 315
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+C+P TY + I C + A N +M ++G++P + T+ I + E
Sbjct: 316 DDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLE 375
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + + +K + + Y+ L + + K A +V+ M LRPN Y ++
Sbjct: 376 KARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELI 435
Query: 479 K 479
K
Sbjct: 436 K 436
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 78/186 (41%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ YN L+ + R + + +EM + P TYN ++ CK G +A + +
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVS 242
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
++ PD TY I+ C+ D AF F +M +G + + I G +
Sbjct: 243 MIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVER 302
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R ++A V D + Y++L + A N++ EM + G++PN+ Y
Sbjct: 303 RIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYT 362
Query: 476 RVLKHL 481
++ L
Sbjct: 363 VLIDSL 368
>gi|226509960|ref|NP_001150456.1| LOC100284086 [Zea mays]
gi|195639404|gb|ACG39170.1| ATP binding protein [Zea mays]
Length = 634
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 146/364 (40%), Gaps = 8/364 (2%)
Query: 121 AMVNGPYATPKQVSEIIELLRSG-DSETESKLLSMSVSLSNASVIEILRVLNSEKVSALC 179
A + P + + I +++ SG D+ E+ L ++S L A V+ +L +
Sbjct: 154 AAASNPEGVDRVCAAIADVVASGADANLEAALSALSPPLCEAVVLAVLHRFKHAHRPSYR 213
Query: 180 FLKYMREIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVL 239
F ++ + F + ++ G+ +E+M ++ + L+ AF
Sbjct: 214 FFRWA-TVSGGFTHTTITYCKMLHILGKTRQFESMVAMIQEMGKAGA-LSMDAFKVAIKS 271
Query: 240 ISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVS-- 297
++ K + V E++ + G V L+ + GL A+ V K + S
Sbjct: 272 FAAAGEIKNAV-GVFELMRKNGFDDGVESFNCLLVALAKEGLGREARQVFDKMHGQYSPD 330
Query: 298 --YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
Y L+ C + + EM + G +P + +N ++ L + + +A ++ E
Sbjct: 331 LRSYTALMLAWCNARNLVEAGRVWNEMLEKGMDPDVVVHNTMIEGLLRGQRRPEAVKMFE 390
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M + P+ TY + I C+ GK D+A F +M + QP +AT+ + GY
Sbjct: 391 LMKAKGPPPNVWTYTMLIRDHCKQGKMDMAMECFEEMQEAKCQPDVATYTCLLVGYGNAK 450
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ + + K Y+ L L N P A + +M+K GL P + Y
Sbjct: 451 QMDRVTAVLEEMTQKGCPPDARTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYN 510
Query: 476 RVLK 479
++K
Sbjct: 511 MMMK 514
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 83/209 (39%), Gaps = 40/209 (19%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
++E+ K K V Y +LI++ C++ + EM++ C+P TY +L V
Sbjct: 388 MFELMK--AKGPPPNVWTYTMLIRDHCKQGKMDMAMECFEEMQEAKCQPDVATYTCLL-V 444
Query: 341 LCKNGQDAD-ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
N + D +LEEM + C PDA TY I D A + +M+K+GL+P
Sbjct: 445 GYGNAKQMDRVTAVLEEMTQKGCPPDARTYNALIKLLTNRNMPDDAARIYKKMIKKGLEP 504
Query: 400 RLATHAAFIKGYFI------------------------------------FYRYEDAYKY 423
+ T+ +K YF+ R E+AYKY
Sbjct: 505 TIHTYNMMMKSYFVGDSNYAMGCAVWEEMHQRGICPDVNSYTVFINRHIRHGRPEEAYKY 564
Query: 424 VVLSADKYKSSSNMLYSLLASLHDKNNNP 452
+ +K + + Y+ A+ K P
Sbjct: 565 IEEMINKGMKAPQIDYNKFAADFSKAGKP 593
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 9/231 (3%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+ G C + ++MF V+ V K V Y LI + + + L
Sbjct: 296 INGYCKEGKEKKAMKMFEVM--------VGKGIRATVVTYTSLIHALSMKGMVQETDRLF 347
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
+ + G P YN ++ C G A E++ EM + PD +TY + C +
Sbjct: 348 NDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLL 407
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
G+ D A +M KRG+QP L ++ I GY + +DA K K + + + Y
Sbjct: 408 GRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTY 467
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
+ + N A++++ EM+ NG+ P+ S Y +++ L T+ E +A
Sbjct: 468 NAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGL-TTEDERLA 517
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 79/181 (43%), Gaps = 6/181 (3%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ +NI+++ +C P L +RQ+ P +TYN V+ C G+ E++
Sbjct: 116 TTTFNIMLRHLCTAGK---PVRALELLRQM-PSPNAVTYNTVIAGFCARGRVQAGIEIMR 171
Query: 356 EMLGRN-CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG-LQPRLATHAAFIKGYFI 413
EM R PD TY I C+VGK + A F++M+ G ++P + A I GY
Sbjct: 172 EMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCD 231
Query: 414 FYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
E A +Y D+ S + Y+L A ++ EM + GL P+
Sbjct: 232 QGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFT 291
Query: 474 Y 474
Y
Sbjct: 292 Y 292
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 80/191 (41%)
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
K E YN LI C + + + EM G TYN + L G+ A+A
Sbjct: 214 KVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEA 273
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
L+EEM + PDA TY I I C+ GK A F MV +G++ + T+ + I
Sbjct: 274 HALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHA 333
Query: 411 YFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
+ ++ + + + +Y+ L + H + A ++ EM K + P+
Sbjct: 334 LSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPD 393
Query: 471 VSVYRRVLKHL 481
Y +++ L
Sbjct: 394 DVTYNTLMRGL 404
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 85/201 (42%), Gaps = 14/201 (6%)
Query: 285 AKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKN 344
+ V + V+ YN+ + + L+ EM + G P TYN ++ CK
Sbjct: 243 GEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKE 302
Query: 345 GQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
G++ A ++ E M+G+ +TY I G FN V+RG++P L +
Sbjct: 303 GKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMY 362
Query: 405 AAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS-------LLASLHDKNNNPVMAKN 457
A I + + A++ + K + ++ Y+ LL L + A+
Sbjct: 363 NALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDE-------ARG 415
Query: 458 VLSEMMKNGLRPNVSVYRRVL 478
++ EM K G++P++ Y ++
Sbjct: 416 LIEEMTKRGIQPDLVSYNTLI 436
>gi|255660968|gb|ACU25653.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 376
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 88/187 (47%), Gaps = 2/187 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI + F+ + EM + C P +TYN ++ CKN +A L++
Sbjct: 164 VHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGFCKNKMFGEAYNLVK 223
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
E+L + P ITY + + C K + A +NQ+ +G +P + H I G
Sbjct: 224 ELLDKGLDPGVITYSMLMEGLCFDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVG 283
Query: 416 RYEDAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ E A + +++K + N++ ++ L K+ + A + + +++NGL P++ Y
Sbjct: 284 KMELALS-LYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISY 342
Query: 475 RRVLKHL 481
L+ L
Sbjct: 343 NITLEGL 349
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 97/226 (42%)
Query: 282 YEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+E+ + + + R VS +NI+++ + + M++ G ++TY ++
Sbjct: 45 FELWEMMGSEGNRSVSSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGF 104
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
CKNG + +LE + A Y I C+ D A + N M+K G +P +
Sbjct: 105 CKNGYIDKSLHVLEMAEQKGGVLGAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNV 164
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
+ I G ++EDA + + S + + Y+ L + KN A N++ E
Sbjct: 165 HVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGFCKNKMFGEAYNLVKE 224
Query: 462 MMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSVE 507
++ GL P V Y +++ L H+ A L ++ +S V+
Sbjct: 225 LLDKGLDPGVITYSMLMEGLCFDHKVERALQLWNQVTSKGFKPDVQ 270
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 72/156 (46%), Gaps = 5/156 (3%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTERKVSY-----YNILIKEMCRRCDFKGPRDLLVEMRQVG 326
L+ F G + + +V++ E+K Y+ +I +C+ + +L M + G
Sbjct: 100 LVHGFCKNGYIDKSLHVLEMAEQKGGVLGAFAYSAMINGLCKEANLDRAVSVLNGMIKSG 159
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
C+P YN ++ L + DA + EM +C P ITY I C+ F A+
Sbjct: 160 CKPNVHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGFCKNKMFGEAY 219
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
N +++ +GL P + T++ ++G ++ E A +
Sbjct: 220 NLVKELLDKGLDPGVITYSMLMEGLCFDHKVERALQ 255
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 85/193 (44%)
Query: 286 KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNG 345
+ V K V YN ++ +C+ +L +M G EP +TYN ++ +G
Sbjct: 257 EMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSG 316
Query: 346 QDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
++ ++ +M + PD +T+ F+ C+ G+ A F M +G P + +++
Sbjct: 317 HWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYS 376
Query: 406 AFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKN 465
+ GY R+ D ADK S+ ++L S H K A V +EM
Sbjct: 377 ILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQ 436
Query: 466 GLRPNVSVYRRVL 478
G+RPNV Y ++
Sbjct: 437 GVRPNVVTYSTLI 449
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 2/182 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVG--CEPITLTYNYVLGVLCKNGQDADACELLEE 356
YN +IK +C + D++ M + G C P +++N V+ K G+ + AC L E
Sbjct: 198 YNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNE 257
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
M+ + PD TY + C+ D A QMV +G++P T+ A I GY
Sbjct: 258 MVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGH 317
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
++++ K K + +S S K+ A+ + M G P++ Y
Sbjct: 318 WKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSI 377
Query: 477 VL 478
+L
Sbjct: 378 LL 379
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 3/206 (1%)
Query: 278 VLGLYEMAKYVIKKTER-KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNY 336
V+ ++ VI +R + +N LI C + +L M VG EP +T N
Sbjct: 529 VMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNT 588
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
++ CK+G+ D L EML + P +TY I + R G+ A F++M+ G
Sbjct: 589 LVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSG 648
Query: 397 LQPRLATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMA 455
+ T+ +KG ++A + L A K +L +++ +L+ K A
Sbjct: 649 TAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALY-KVRRREEA 707
Query: 456 KNVLSEMMKNGLRPNVSVYRRVLKHL 481
++ + + +GL PNVS Y ++++L
Sbjct: 708 NDLFAAISTSGLVPNVSTYGVMIRNL 733
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 110/258 (42%), Gaps = 20/258 (7%)
Query: 238 VLISSKALTKKGIW-RVVEVLNQVGGSCLVSGVR-------ALIEMFSVLG-----LYEM 284
+LIS+ A K+G+ + V ++ G GVR LI F +G + +
Sbjct: 412 ILISAHA--KRGMMDEAMLVFTEMQGQ----GVRPNVVTYSTLISAFCRMGRLADAMEKF 465
Query: 285 AKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCE-PITLTYNYVLGVLCK 343
++ + E + Y+ LI C D ++ + EM G P + ++ ++ LC
Sbjct: 466 SQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCI 525
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
G+ DA ++ ++ P +T+ I C VGK + AF + MV G++P + T
Sbjct: 526 EGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVT 585
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
+ + GY + +D K + + Y+++ + AK + EM+
Sbjct: 586 NNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMI 645
Query: 464 KNGLRPNVSVYRRVLKHL 481
+G ++ Y+ +LK L
Sbjct: 646 DSGTAVDIDTYKILLKGL 663
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML--GRNCHPDAITYEIFIVY 375
LL M ++ C P ++YN V+ LC + + +A ++++ M G C PD +++ I
Sbjct: 182 LLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHG 241
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLS-ADKYKSS 434
+ G+ A N FN+MV++G+ P + T+ + + R D ++V+ DK
Sbjct: 242 FFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDA-LCKARAMDKAEFVLRQMVDKGVEP 300
Query: 435 SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL----KHLHTSHQEHMA 490
+ Y+ + + + + + + +M GL P+ + + KH + E +
Sbjct: 301 DGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIF 360
Query: 491 KCLSSR--------YSSLSLGSSVEAR 509
+ ++++ YS L G + E R
Sbjct: 361 QYMTTKGHMPDIVSYSILLHGYATEGR 387
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 99/237 (41%), Gaps = 38/237 (16%)
Query: 282 YEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+ + + V K E YN +I +K + +M G P T+T++ + L
Sbjct: 288 FVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSL 347
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIF------------------------IVYSC 377
CK+G+ DA E+ + M + PD ++Y I IV +C
Sbjct: 348 CKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNC 407
Query: 378 -----------RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY-KYVV 425
+ G D A F +M +G++P + T++ I + R DA K+
Sbjct: 408 HCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQ 467
Query: 426 LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL-RPNVSVYRRVLKHL 481
+ + + ++ + +SL+ + + V AK +SEMM GL RPN+ + ++ L
Sbjct: 468 MISIGIEPNTAVYHSLIHGFC-MHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSL 523
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 70/181 (38%), Gaps = 15/181 (8%)
Query: 230 EKAFGFLPVLISSKALTKKGIWRVVEVLNQ-VGGSCLVSGVRALIEMFSVLGLYEMAKYV 288
EKAFG L ++S GI V N V G C + GL + +
Sbjct: 565 EKAFGVLDAMVSV------GIEPDVVTNNTLVSGYCKSGKIDD--------GLILFREML 610
Query: 289 IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
KK + YNI++ + R + + EM G TY +L LC+N
Sbjct: 611 HKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTD 670
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
+A L ++ +C D I +V + + A + F + GL P ++T+ I
Sbjct: 671 EAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMI 730
Query: 409 K 409
+
Sbjct: 731 R 731
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 80/185 (43%), Gaps = 1/185 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI +CR D L EM + G +P T+ ++ CK G A EL +
Sbjct: 365 VVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFD 424
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EML R PD Y IV ++G AF +M+ RG P L T+ FI G
Sbjct: 425 EMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLG 484
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
++A + V ++ Y+ + H + A+ V EM+ G+ P+V Y
Sbjct: 485 NLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTY- 543
Query: 476 RVLKH 480
VL H
Sbjct: 544 TVLIH 548
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 89/186 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN ++ C++ + LL++M+++GC P +TYN ++ L +G+ A EL++
Sbjct: 190 VVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQ 249
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EML A TY+ I C G+ D A +M+ RG P L T+ + G +
Sbjct: 250 EMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWG 309
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R DA K + + +K + Y+ L + + N A + +E+ GL P+V Y
Sbjct: 310 RVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYN 369
Query: 476 RVLKHL 481
++ L
Sbjct: 370 TLIDGL 375
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 79/188 (42%), Gaps = 1/188 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI R + L E+R G P +TYN ++ LC+ G A L +EM+
Sbjct: 333 YNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMI 392
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD T+ I + C++G +A F++M+ RGLQP + I G
Sbjct: 393 KHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPS 452
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A+ + + Y++ K N A ++ +M+ NGL P+ Y ++
Sbjct: 453 KAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSII 512
Query: 479 K-HLHTSH 485
HL H
Sbjct: 513 HAHLMAGH 520
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 110/268 (41%), Gaps = 54/268 (20%)
Query: 263 SCLVSGV--RALIEMFSVLGLYEMAKYVIKKTER---KVS--YYNILIKEMCRRCDFKGP 315
CL + V L+ S G E AK +I++ R +VS Y+ LI+ C +
Sbjct: 220 GCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEA 279
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITY------ 369
L EM G P +TYN ++ LCK G+ +DA +LL+ M+ +N PD ++Y
Sbjct: 280 SRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYG 339
Query: 370 --------EIFIVYS---------------------CRVGKFDVAFNFFNQMVKRGLQPR 400
E F++++ CR+G DVA ++M+K G P
Sbjct: 340 YTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPD 399
Query: 401 LATHAAFIKGYFIFYRYEDAYKYV------VLSADKYKSSSNMLYSLLASLHDKNNNPVM 454
+ T ++G+ A + L D++ + ++ L K +P
Sbjct: 400 VFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGEL------KLGDPSK 453
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVLKHLH 482
A + EM+ G P++ Y + LH
Sbjct: 454 AFGMQEEMLARGFPPDLITYNVFIDGLH 481
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 93/198 (46%), Gaps = 2/198 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+ I + + + K +L+ +M G P +TY ++ G A + EML
Sbjct: 473 YNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEML 532
Query: 359 GRNCHPDAITYEIFI-VYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
+ P +TY + I Y+ R G+ +A F +M ++G+ P + T+ A I G +
Sbjct: 533 SKGIFPSVVTYTVLIHSYAVR-GRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKM 591
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ AYK+ K S + Y++L + + + A + +M+ ++P+ + +
Sbjct: 592 DQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSAL 651
Query: 478 LKHLHTSHQEHMAKCLSS 495
LKHL+ ++ H+ + L +
Sbjct: 652 LKHLNKDYKSHVVRHLEN 669
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%)
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
R++ M + G P +TYN +L CK G+ +A +LL +M C P+ +TY + +
Sbjct: 175 REVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNG 234
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
G+ + A +M++ GL+ T+ I+GY
Sbjct: 235 LSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGY 270
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 82/212 (38%), Gaps = 37/212 (17%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY-NYVLGVLCKNGQDADACELLEEM 357
+ IL++ C+ + ++L EM G +P Y ++G L K G + A + EEM
Sbjct: 403 FTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGEL-KLGDPSKAFGMQEEM 461
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
L R PD ITY +FI ++G A +M+ GL P T+ + I + +
Sbjct: 462 LARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHL 521
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLA-----------------SLHDKNNNP-VMAKNVL 459
A + K S + Y++L +H+K +P V+ N L
Sbjct: 522 RKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNAL 581
Query: 460 -----------------SEMMKNGLRPNVSVY 474
+EM G+ PN Y
Sbjct: 582 INGLCKVRKMDQAYKFFTEMQAKGISPNKYTY 613
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 3/94 (3%)
Query: 276 FSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYN 335
++L +EM + K V YN LI +C+ EM+ G P TY
Sbjct: 558 LAILHFFEMHE---KGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYT 614
Query: 336 YVLGVLCKNGQDADACELLEEMLGRNCHPDAITY 369
++ C G +A L ++ML R PD+ T+
Sbjct: 615 ILINENCNLGHWQEALRLYKDMLDREIQPDSCTH 648
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 83/169 (49%), Gaps = 8/169 (4%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
G CLV+ + + FS++ L + Y E V YN LI +C+ + +LL E
Sbjct: 150 GFCLVNRIG---DAFSLVILMVKSGY-----EPNVVVYNTLIDGLCKNGELNIALELLNE 201
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M + G +TYN +L LC +G+ +DA +L +M+ R+ +PD +T+ I + G
Sbjct: 202 MEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGN 261
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADK 430
D A + +M++ + P T+ + I G + R DA K L A K
Sbjct: 262 LDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASK 310
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 11/208 (5%)
Query: 282 YEMAKYVIKKTE-----RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNY 336
YE Y +K E + + ILI CR +L +M ++G EP +T+
Sbjct: 87 YETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGS 146
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
+L C + DA L+ M+ P+ + Y I C+ G+ ++A N+M K+G
Sbjct: 147 LLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKG 206
Query: 397 LQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN---MLYSLLASLHDKNNNPV 453
L + T+ + G R+ DA + + D K S N + ++ L + K N
Sbjct: 207 LGADVVTYNTLLTGLCYSGRWSDAARML---RDMMKRSINPDVVTFTALIDVFVKQGNLD 263
Query: 454 MAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A+ + EM+++ + PN Y ++ L
Sbjct: 264 EAQELYKEMIQSSVDPNNVTYNSIINGL 291
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 86/206 (41%)
Query: 288 VIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQD 347
V +K + V ++ LI + + R+L EM + P TYN ++ C +G
Sbjct: 771 VKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCL 830
Query: 348 ADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAF 407
DA + + M+ + C PD +TY I C+ + + F +M +GL T+
Sbjct: 831 GDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTL 890
Query: 408 IKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
I GY + A K D S + Y++L N A ++ ++ K+ +
Sbjct: 891 IHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEM 950
Query: 468 RPNVSVYRRVLKHLHTSHQEHMAKCL 493
++ Y +++ L + + A CL
Sbjct: 951 DVDIITYNIIIQGLCRTDKLKEAWCL 976
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 50/112 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI C+ + + M G P +TYN +L LC NG+ A ++E++
Sbjct: 887 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 946
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
D ITY I I CR K A+ F + ++G++P + I G
Sbjct: 947 KSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISG 998
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 77/183 (42%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN +I +C+ D ++ M + G +TYN ++ L +G+ DA LL
Sbjct: 709 VVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLR 768
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M+ R P+ I + I + G A N + +M++R + P + T+ + I G+ I
Sbjct: 769 DMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHG 828
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
DA L K + Y+ L + K+ + EM GL + Y
Sbjct: 829 CLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYN 888
Query: 476 RVL 478
++
Sbjct: 889 TLI 891
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 66/148 (44%), Gaps = 11/148 (7%)
Query: 271 ALIEMFSVLGLYEMAKYVIKK-----TERKVSYYNILIKEMC---RRCDFKGPRDLLVEM 322
ALI++F G + A+ + K+ + YN +I +C R D K DL M
Sbjct: 251 ALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDL---M 307
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
GC P +TYN ++ CK + +L + M + D TY I C+VGK
Sbjct: 308 ASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKL 367
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKG 410
VA + F MV R + P + TH + G
Sbjct: 368 RVALDIFCWMVSRRVTPDIITHCILLHG 395
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 52/116 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V + LI ++ + ++L EM Q +P +TYN ++ LC +G+ DA + +
Sbjct: 246 VVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFD 305
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
M + C P+ +TY I C+ D F +M G + T+ I GY
Sbjct: 306 LMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGY 361
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 78/180 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ ILI CR LL +M ++G P +T +L C+ + +A L++ M
Sbjct: 642 FTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD 701
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
G P+ + Y I C+ + A F M K+G++ T+ I G R+
Sbjct: 702 GFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT 761
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA + + + + + ++ L K N + A+N+ EM++ + PNV Y ++
Sbjct: 762 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 821
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 47/112 (41%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI C+ + D+ M P +T+ +L LC NG+ A ++M
Sbjct: 354 YNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMR 413
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ + Y I I C+ K + A+ F ++ G++P T+ I G
Sbjct: 414 ESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILG 465
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 45/101 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNIL+ +C + ++ ++++ + +TYN ++ LC+ + +A L +
Sbjct: 922 YNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLT 981
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
+ PDAI Y I CR G A +M + G P
Sbjct: 982 RKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMP 1022
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 1/182 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++ ++C+ K + EMR+ G +TYN ++G LC+ + +A +++++M
Sbjct: 271 YNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMK 330
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+P+ ITY I C VGK A + + RGL P L T+ + G+
Sbjct: 331 SYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTS 390
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A K V ++ S + Y++L +++N A + S M + GL P+V Y VL
Sbjct: 391 GAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTY-SVL 449
Query: 479 KH 480
H
Sbjct: 450 IH 451
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 88/199 (44%), Gaps = 3/199 (1%)
Query: 283 EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLC 342
+M YVI + YN LI C L +++ G P +TYN ++ C
Sbjct: 328 QMKSYVINPN---LITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFC 384
Query: 343 KNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLA 402
+ G + A ++++EM R P +TY I I R + A + M + GL P +
Sbjct: 385 RKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVH 444
Query: 403 THAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM 462
T++ I G+ I + +A + +K + ++Y+ + + K + A + +M
Sbjct: 445 TYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDM 504
Query: 463 MKNGLRPNVSVYRRVLKHL 481
+ L PNV+ Y +++ L
Sbjct: 505 EEKELAPNVASYSYLIRVL 523
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y LI C++ + + +DL EM + G TY ++ L KNG E+ E
Sbjct: 198 VVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYE 257
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+M P+ TY + C+ G+ AF F++M +RG+ + T+ I G
Sbjct: 258 KMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGG 312
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 77/180 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ I+IK C + + DLLVE+R+ G P + Y ++ CK G+ A +L EM
Sbjct: 166 FGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMG 225
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ TY + I + G F + +M + G+ P L T+ + R +
Sbjct: 226 KFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTK 285
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA+K ++ S + + Y+ L + A V+ +M + PN+ Y ++
Sbjct: 286 DAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLI 345
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 42/104 (40%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI C + L M + EP + YN ++ CK G A L
Sbjct: 443 VHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFR 502
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
+M + P+ +Y I C+ K A + +M+ G+ P
Sbjct: 503 DMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDP 546
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 83/180 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L++ +C+ F+ R + M GC P +Y+ ++ LC+ + +A ELL EM+
Sbjct: 55 YGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMI 114
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ +TY + C++GK A + F++MV RG P + I G+
Sbjct: 115 DGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMG 174
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+AY+ +K + Y+ L S + +++ +M++ G PN+ + +L
Sbjct: 175 EAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLL 234
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 89/196 (45%), Gaps = 6/196 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ILI +CR +LL EM G +P +TY +L LCK G+ +A +L M+
Sbjct: 90 YSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMV 149
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R C PD + Y + I + G A+ F +M+++G P + T+ + + G F R
Sbjct: 150 YRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSG---FSRKG 206
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHD---KNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ + L D + +L D K + V A + EM G P+V Y
Sbjct: 207 EFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYN 266
Query: 476 RVLKHLHTSHQEHMAK 491
+++ + + + H A+
Sbjct: 267 TLMRGMCSKGKPHEAQ 282
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 82/184 (44%), Gaps = 8/184 (4%)
Query: 299 YNILIKEMCR--RCD--FKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
YN L++ + + RCD + D+L GC P T TY Y+L LC+ + +A +
Sbjct: 20 YNYLLEVLAKSGRCDHVYGTYNDML----GAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
M + C P+ +Y I I CR K D A N+M+ G QP + T+ + + G
Sbjct: 76 RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ ++A + ++Y++L K + A + EM++ G P V Y
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTY 195
Query: 475 RRVL 478
+L
Sbjct: 196 NSLL 199
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 9/174 (5%)
Query: 244 ALTKKG----IWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK---- 295
+KKG +R+ E + + G V +L+ FS G + + + K R+
Sbjct: 166 GFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVP 225
Query: 296 -VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
+ +N L+ C+ D L +EMR +GC P ++YN ++ +C G+ +A LL
Sbjct: 226 NIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLL 285
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
EM+ PD ++Y I I + G D A F ++ K GL+P +++ I
Sbjct: 286 REMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTII 339
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 71/175 (40%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ R+ +F + L +M + GC P T+N +L CK G +A L EM
Sbjct: 195 YNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMR 254
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C PD ++Y + C GK A +M++ G+ P + ++ I GY +
Sbjct: 255 SLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALD 314
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
A K YS + + A V +M+ NG P+ +V
Sbjct: 315 HAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAV 369
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 80/199 (40%), Gaps = 6/199 (3%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN L++ MC + + LL EM + G P ++YN ++ K+G A +L
Sbjct: 262 VVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFY 321
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
E+ PDA +Y I CR GK AF F M+ G P A + G
Sbjct: 322 EIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIG---LC 378
Query: 416 RYEDAYKYVVLSADKYKSSSNML---YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
R E + L K L Y+LL K + E+ + G P+V
Sbjct: 379 RGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVE 438
Query: 473 VYRRVLKHLHTSHQEHMAK 491
+ + +L+ L S + A+
Sbjct: 439 ISKVILETLRRSDDKEAAE 457
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 66/144 (45%)
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN 390
TL+YNY+L VL K+G+ +MLG C P+ TY + C+ +F+ A + F
Sbjct: 17 TLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76
Query: 391 QMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNN 450
M +G P + +++ I G + ++A + + D + + Y L S K
Sbjct: 77 GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMG 136
Query: 451 NPVMAKNVLSEMMKNGLRPNVSVY 474
A ++ S M+ G P+ VY
Sbjct: 137 KLKEAVDLFSRMVYRGCPPDGVVY 160
>gi|255540805|ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550582|gb|EEF52069.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 482
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 124/285 (43%), Gaps = 7/285 (2%)
Query: 130 PKQVSEIIELLRSGDSETESK-LLSMSVSLSNASVIEILRVLNSEKVSALCFLKYMREIM 188
P+ + +L S +S+T ++ L S S+ + V IL+ L + AL F K +
Sbjct: 27 PEATTLAALILNSTNSQTLAESLHSPSIQWTPQLVNTILKRLWNHGPKALHFFKILSH-H 85
Query: 189 PEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKK 248
P + + ID C RL D+ T+ L++ ++ + + F + ++ +
Sbjct: 86 PSYCHQASSFDHAIDICARLRDFRTLWFLVSRMRSCRLGPSPRTFAIIAERYAAMGKPHR 145
Query: 249 GIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSY----YNILIK 304
+ V +++ G +S ++++ EMA + K + K YNI++
Sbjct: 146 AV-TVFMSMHEYGCFQDLSSFNTILDVLCKSKRVEMAYNLFKALKGKFKADCVSYNIIVN 204
Query: 305 EMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHP 364
C ++L EM + G P TYN +L + GQ +A EM R C
Sbjct: 205 GWCLIKRTPKALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRKCDI 264
Query: 365 DAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
D +TY I VG+ A N FNQMVK G+ P +AT A I+
Sbjct: 265 DVVTYTSVIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQ 309
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 37/226 (16%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
++I V+G + A+ V + + V+ +N LI+ +C++ + + EM +
Sbjct: 271 SVIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQILCKKDSVENAILIFEEMVKR 330
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P ++TYN V+ LC G+ A EL+E M +C P+ TY I I Y C G+ +
Sbjct: 331 GYVPNSITYNLVIRGLCHVGEMQRAMELMERMEDDDCEPNVQTYNILIRYFCDAGEIEKG 390
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
+ F +M P L T+ I F+ K+S N+L
Sbjct: 391 LDLFQKMGNGDCLPNLDTYNILINSMFV-----------------RKNSDNLL------- 426
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
+A +L EM+ G P + RVL L + + AK
Sbjct: 427 --------VAGKLLVEMVDRGFLPRKLTFNRVLDGLLLTGNQDFAK 464
>gi|56201849|dbj|BAD73299.1| fertility restorer B-like [Oryza sativa Japonica Group]
gi|56202086|dbj|BAD73615.1| fertility restorer B-like [Oryza sativa Japonica Group]
Length = 647
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 2/186 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ YN+L+K C D P D V + + +P +YN V+ LC+ G+ +A +L
Sbjct: 272 TATYNVLVKAHC--SDAAVPIDDAVRVFRNIPKPDACSYNTVIDGLCRRGRLPEARDLFA 329
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM+ P +TY I + R FD A F++M +RG+ P + T+++ I G
Sbjct: 330 EMIANGTAPTVVTYTTLIHWLAREACFDDALKLFDEMARRGIMPNVVTYSSLIDGLCKGG 389
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R A + + + K + + YS + K A +L M G +P+ ++
Sbjct: 390 RAASAVELLDRMVKERKLPNTITYSSVIDGLCKEGCLGQAMEILDRMRLQGRKPDAGLFG 449
Query: 476 RVLKHL 481
+++ L
Sbjct: 450 KLIVGL 455
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 75/173 (43%), Gaps = 2/173 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I +CRR RDL EM G P +TY ++ L + DA +L +EM
Sbjct: 308 YNTVIDGLCRRGRLPEARDLFAEMIANGTAPTVVTYTTLIHWLAREACFDDALKLFDEMA 367
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R P+ +TY I C+ G+ A ++MVK P T+++ I G
Sbjct: 368 RRGIMPNVVTYSSLIDGLCKGGRAASAVELLDRMVKERKLPNTITYSSVIDGLCKEGCLG 427
Query: 419 DAYKYV-VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
A + + + K + + L+ L D + A N L EM G+RPN
Sbjct: 428 QAMEILDRMRLQGRKPDAGLFGKLIVGLCDAGRA-LEASNYLDEMNFAGIRPN 479
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 72/170 (42%), Gaps = 4/170 (2%)
Query: 285 AKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKN 344
A+ + T V Y LI + R F L EM + G P +TY+ ++ LCK
Sbjct: 329 AEMIANGTAPTVVTYTTLIHWLAREACFDDALKLFDEMARRGIMPNVVTYSSLIDGLCKG 388
Query: 345 GQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
G+ A A ELL+ M+ P+ ITY I C+ G A ++M +G +P
Sbjct: 389 GRAASAVELLDRMVKERKLPNTITYSSVIDGLCKEGCLGQAMEILDRMRLQGRKPDAGLF 448
Query: 405 AAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM 454
I G R +A Y+ D+ + L SLH + N+ V+
Sbjct: 449 GKLIVGLCDAGRALEASNYL----DEMNFAGIRPNRLTWSLHGRINDAVV 494
>gi|224133408|ref|XP_002321560.1| predicted protein [Populus trichocarpa]
gi|222868556|gb|EEF05687.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 90/226 (39%), Gaps = 37/226 (16%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
+I F V G + A+ V +K V+ YN I+ +C++ + + EM
Sbjct: 280 TVIHGFGVAGEIKRARKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIVIFEEMVVK 339
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P ++TYN V+ LC G+ A E + M C P+ TY + I Y C G+ D A
Sbjct: 340 GYVPNSITYNLVIRGLCHRGEMERAMEFMGRMKDDGCEPNVQTYNLVIRYFCDEGEIDKA 399
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
+ F +M P L T+ I F+
Sbjct: 400 LDLFQKMTSGDCLPNLDTYNILISAMFV-------------------------------- 427
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
K+++ ++A N+L EM+ G P + RVL L + + AK
Sbjct: 428 RKKSDDLLVAGNLLIEMVDRGFVPRKFTFNRVLNGLLLTGNQGFAK 473
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 140/338 (41%), Gaps = 12/338 (3%)
Query: 151 LLSMSVSLSNASVIEILRVLNSEKVSALCFLKYMREIMPEFYKNSDICSLVIDNCGRLDD 210
L S ++ + V IL+ L ++ AL F + P + + ID RL D
Sbjct: 58 LHSPTIQWTPQLVNTILKRLWNDGPKALQFFNLLSH-HPSYSHHPSSYDHAIDISARLRD 116
Query: 211 YETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVR 270
++R L+ ++ K F + +S + + +V ++Q G +
Sbjct: 117 SPSLRSLVYRMRSARLGPTPKTFAIIAERYASAGKPHRAV-KVFLSMHQFGCFQDLQSFN 175
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERKVSY----YNILIKEMCRRCDFKGPRDLLVEMRQVG 326
++++ EMA + K + K YN+++ C ++L EM + G
Sbjct: 176 TILDVLCKSKRVEMAYNLFKVFKGKFRADCVSYNVMVNGWCLIKRTNKALEMLKEMVKRG 235
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
P +YN +L + GQ +A + EM R+C D ITY I G+ A
Sbjct: 236 LTPNLTSYNTMLKGYFRAGQINEAWDFFLEMKKRDCEIDVITYTTVIHGFGVAGEIKRAR 295
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSAD---KYKSSSNMLYSLLA 443
F+ MVK+G+ P +AT+ AFI+ + + ++ +V+ + K +++ Y+L+
Sbjct: 296 KVFDTMVKKGVLPSVATYNAFIQ---VLCKKDNVDNAIVIFEEMVVKGYVPNSITYNLVI 352
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A + M +G PNV Y V+++
Sbjct: 353 RGLCHRGEMERAMEFMGRMKDDGCEPNVQTYNLVIRYF 390
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 2/162 (1%)
Query: 332 LTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQ 391
++YN ++ C + A E+L+EM+ R P+ +Y + R G+ + A++FF +
Sbjct: 206 VSYNVMVNGWCLIKRTNKALEMLKEMVKRGLTPNLTSYNTMLKGYFRAGQINEAWDFFLE 265
Query: 392 MVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNN 451
M KR + + T+ I G+ + + A K K S Y+ + K +N
Sbjct: 266 MKKRDCEIDVITYTTVIHGFGVAGEIKRARKVFDTMVKKGVLPSVATYNAFIQVLCKKDN 325
Query: 452 PVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
A + EM+ G PN Y V++ L H+ M + +
Sbjct: 326 VDNAIVIFEEMVVKGYVPNSITYNLVIRGL--CHRGEMERAM 365
>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 123/279 (44%), Gaps = 22/279 (7%)
Query: 219 NDFNVYQVCLNEKAFGFLPVLISSKALT----KKG----IWRVVEVLNQVGGSC------ 264
+ F +YQ K G LP L + +L + G ++V + +++ G +C
Sbjct: 195 DGFELYQ---KMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYN 251
Query: 265 -LVSGVRALIEMFSVLGLYE-MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
L+ G+ ++ GL E M + I T R +N+L+ +C L ++
Sbjct: 252 ILIGGLCRKGQVSKAEGLLERMKRAHINPTTRT---FNMLMDGLCNTGQLDKALSYLEKL 308
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
+ +G P +TYN ++ K G + EL+ EM R P +TY I + R
Sbjct: 309 KLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDI 368
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
+ A+ F+ M + GL P T+ I G I +A K + + ++++Y+ +
Sbjct: 369 EKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTM 428
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + K N A L EM+KNG+ PNV+ Y ++ L
Sbjct: 429 INGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQIL 467
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 49/115 (42%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y ILI+ CR D + + M +G Y ++ K G D EL +
Sbjct: 142 VFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQ 201
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+M P+ TY I CR GK +AF F+++ KRG+ T+ I G
Sbjct: 202 KMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGG 256
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 80/180 (44%), Gaps = 8/180 (4%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y I+I ++ K +L +M+ VG P TYN ++ C++G+ + A ++ +E+
Sbjct: 180 YTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEIS 239
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R +A+TY I I CR G+ A +M + + P T + G + +
Sbjct: 240 KRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLD 299
Query: 419 DAYKYVVLSADKYK----SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
A Y+ +K K + + Y++L S K N + ++ EM G+ P+ Y
Sbjct: 300 KALSYL----EKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTY 355
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 45/101 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +LI +C + + L M ++ +P + YN ++ CK A + LEEM+
Sbjct: 390 YGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMV 449
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
P+ +Y I C+ GK A +M + GL+P
Sbjct: 450 KNGVTPNVASYISTIQILCKDGKSIEAKRLLKEMTEAGLKP 490
>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 123/279 (44%), Gaps = 22/279 (7%)
Query: 219 NDFNVYQVCLNEKAFGFLPVLISSKALT----KKG----IWRVVEVLNQVGGSC------ 264
+ F +YQ K G LP L + +L + G ++V + +++ G +C
Sbjct: 195 DGFELYQ---KMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYN 251
Query: 265 -LVSGVRALIEMFSVLGLYE-MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
L+ G+ ++ GL E M + I T R +N+L+ +C L ++
Sbjct: 252 ILIGGLCRKGQVSKAEGLLERMKRAHINPTTRT---FNMLMDGLCNTGQLDKALSYLEKL 308
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
+ +G P +TYN ++ K G + EL+ EM R P +TY I + R
Sbjct: 309 KLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDI 368
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
+ A+ F+ M + GL P T+ I G I +A K + + ++++Y+ +
Sbjct: 369 EKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTM 428
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + K N A L EM+KNG+ PNV+ Y ++ L
Sbjct: 429 INGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQIL 467
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 49/115 (42%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y ILI+ CR D + + M +G Y ++ K G D EL +
Sbjct: 142 VFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQ 201
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+M P+ TY I CR GK +AF F+++ KRG+ T+ I G
Sbjct: 202 KMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGG 256
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 80/180 (44%), Gaps = 8/180 (4%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y I+I ++ K +L +M+ VG P TYN ++ C++G+ + A ++ +E+
Sbjct: 180 YTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEIS 239
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R +A+TY I I CR G+ A +M + + P T + G + +
Sbjct: 240 KRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLD 299
Query: 419 DAYKYVVLSADKYK----SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
A Y+ +K K + + Y++L S K N + ++ EM G+ P+ Y
Sbjct: 300 KALSYL----EKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTY 355
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 45/101 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +LI +C + + L M ++ +P + YN ++ CK A + LEEM+
Sbjct: 390 YGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMV 449
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
P+ +Y I C+ GK A +M + GL+P
Sbjct: 450 KNGVTPNVASYISTIQILCKDGKSIEAKRLLKEMTEAGLKP 490
>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 550
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 100/222 (45%), Gaps = 8/222 (3%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+ G C + R E+ L++M V++ V YN+++ +C+ RDL
Sbjct: 190 INGLCKIGLTREAFEL-----LHKMEGQVVRP---NVVIYNMIVDGLCKDGLVTEARDLY 241
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
++ G +P TY ++ C GQ + LL +M+ RN + + TY I I C+
Sbjct: 242 SDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKK 301
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
G A + N M++RG +P L T + GY ++ +A K A+ + Y
Sbjct: 302 GMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSY 361
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
++L + KNN A ++ ++M L PN+ Y ++ L
Sbjct: 362 NILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGL 403
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 92/212 (43%), Gaps = 2/212 (0%)
Query: 263 SCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
+CL+ G L + V L + V + V YNILI +C++ D+ M
Sbjct: 257 TCLIHGFCGLGQWREVTRL--LCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLM 314
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
+ G P +T+N ++ C +A +L + PD +Y I I+ C+ +
Sbjct: 315 IERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRI 374
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
D A + FN+M + L P + T+++ I G R A++ D S + + Y+++
Sbjct: 375 DEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIM 434
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
K A + + M + GL PNVS Y
Sbjct: 435 LDALCKIQLVDKAIELFNLMFERGLTPNVSSY 466
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 72/162 (44%), Gaps = 14/162 (8%)
Query: 262 GSCLVSGV---RALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDL 318
G CL + V R L + F+ G+ V YNILI C+ L
Sbjct: 332 GYCLYNDVVEARKLFDTFAECGI-----------TPDVWSYNILIIGYCKNNRIDEALSL 380
Query: 319 LVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCR 378
+M P +TY+ ++ LCK+G+ + A EL + P+ ITY I + C+
Sbjct: 381 FNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCK 440
Query: 379 VGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
+ D A FN M +RGL P ++++ I GY R ++A
Sbjct: 441 IQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEA 482
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 2/132 (1%)
Query: 279 LGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
L L+ Y KK + Y+ LI +C+ +L + G P +TYN +L
Sbjct: 378 LSLFNKMNY--KKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIML 435
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
LCK A EL M R P+ +Y I I C+ + D A N F +M +R L
Sbjct: 436 DALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLV 495
Query: 399 PRLATHAAFIKG 410
P T+ I G
Sbjct: 496 PDSVTYNCLIDG 507
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 72/147 (48%)
Query: 332 LTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQ 391
+TY ++ LCK G +A ELL +M G+ P+ + Y + + C+ G A + ++
Sbjct: 184 VTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSD 243
Query: 392 MVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNN 451
+V RG+ P + T+ I G+ ++ + + + D+ + + Y++L K
Sbjct: 244 VVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGM 303
Query: 452 PVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A ++ + M++ G RP++ + ++
Sbjct: 304 LGKAHDMRNLMIERGQRPDLVTFNTLM 330
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 61/153 (39%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P + +N +LG + K A L ++M R P +T I I C +G AF+
Sbjct: 76 PSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSV 135
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
++KRG Q T +KG I A ++ + + Y L + K
Sbjct: 136 LGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCK 195
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A +L +M +RPNV +Y ++ L
Sbjct: 196 IGLTREAFELLHKMEGQVVRPNVVIYNMIVDGL 228
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 124/305 (40%), Gaps = 33/305 (10%)
Query: 199 SLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLN 258
+VI C + E LL + + FGF P ++ L
Sbjct: 167 GIVIKGCCEAGEIEKSFDLLVEL---------REFGFSPNVVIYTTL------------- 204
Query: 259 QVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDL 318
+ G C + ++F +EM K+ + E Y +LI + + K ++
Sbjct: 205 -IDGCCKKGEIEKAKDLF-----FEMGKFGLVANEWT---YTVLIHGLFKNGIKKQGFEM 255
Query: 319 LVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCR 378
+M++ G P TYN V+ LCK+G+ DA ++ +EM R + +TY I CR
Sbjct: 256 YEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCR 315
Query: 379 VGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML 438
K + A +QM G+ P L T+ I G+ + A + S S +
Sbjct: 316 EMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVT 375
Query: 439 YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYS 498
Y++L S K + A V+ EM + G++P+ Y ++ S ++M K + R S
Sbjct: 376 YNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARS--DNMEKAIQLRSS 433
Query: 499 SLSLG 503
LG
Sbjct: 434 MEELG 438
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 86/182 (47%), Gaps = 1/182 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++ ++C+ K + EMR+ G +TYN ++G LC+ + +A E++++M
Sbjct: 271 YNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMK 330
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+P+ ITY I C V K A + + RGL P L T+ + G+
Sbjct: 331 SDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTS 390
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A K V ++ S + Y++L +++N A + S M + GL P+V Y VL
Sbjct: 391 GAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTY-SVL 449
Query: 479 KH 480
H
Sbjct: 450 IH 451
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI C L +++ G P +TYN ++ CK G + A ++++EM
Sbjct: 341 YNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEME 400
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R P +TY I I R + A + M + GL P + T++ I G+ I R
Sbjct: 401 ERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMN 460
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + +K + ++Y+ + + K + A + EM + L PNV+ YR ++
Sbjct: 461 EASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMI 520
Query: 479 KHLHTSHQEHMAKCLSSRYSSLSLGSS 505
+ L + A+ L + +G S
Sbjct: 521 EVLCKERKSKEAEGLVEKMIDSGIGPS 547
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 79/180 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ I+IK C + + DLLVE+R+ G P + Y ++ CK G+ A +L EM
Sbjct: 166 FGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMG 225
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ TY + I + G F + +M + G+ P L T+ + R +
Sbjct: 226 KFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTK 285
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA+K ++ S + + Y+ L + A V+ +M +G+ PN+ Y ++
Sbjct: 286 DAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLI 345
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 89/202 (44%), Gaps = 7/202 (3%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTER------KVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
L+ F G A V+K+ E KV+Y ILI R + + L M ++
Sbjct: 379 LVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTY-TILIDTFARSDNMEKAIQLRSSMEEL 437
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P TY+ ++ C G+ +A L + M+ + P+ + Y ++ C+ G A
Sbjct: 438 GLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRA 497
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
F +M ++ L P +A++ I+ + ++A V D S+ + +L++
Sbjct: 498 LRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDSILNLISRA 557
Query: 446 HDKNNNPVMAKNVLSEMMKNGL 467
+ +++ M + + M+ +GL
Sbjct: 558 KNDSHSRSMDEEEPASMVFDGL 579
>gi|225461712|ref|XP_002283237.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Vitis vinifera]
Length = 464
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 59/112 (52%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I C DF+ +L EM GC+P ++YN ++ LCK G+ +A +L E+M
Sbjct: 292 YNAMISGFCNEKDFEAAYGVLEEMVAKGCKPDVISYNVIISGLCKEGKWREANDLFEDMP 351
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
R C PD +Y I C +F+ A ++MV +G P+ A+ F++
Sbjct: 352 RRGCTPDVGSYRILFDGLCEGMQFNEAAFILDEMVFKGYAPKSASKTKFVEA 403
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
+L EMR+ GC+P T+TYN ++ C A +LEEM+ + C PD I+Y + I C
Sbjct: 276 VLEEMRENGCKPDTVTYNAMISGFCNEKDFEAAYGVLEEMVAKGCKPDVISYNVIISGLC 335
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ GK+ A + F M +RG P + ++ G
Sbjct: 336 KEGKWREANDLFEDMPRRGCTPDVGSYRILFDG 368
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 5/153 (3%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P TYN ++ C +G DA + +EML ++ P+ +T+ I C + D AF
Sbjct: 146 PDVCTYNVLINACCSSGSLGDAWNVFDEMLRKHVCPNVVTFGTLISGLCGDSRLDEAFRL 205
Query: 389 FNQMVKR-GLQPRLATHAAFIKGYFIFYRYEDAYKY-VVLSADKYKSSSNMLYSLLASLH 446
MVK ++P +A+ +KG A++ + A+K + S + +L+A+L
Sbjct: 206 KEDMVKVFNVKPNAFVYASLMKGLCRVNELSLAFELKKEMVANKLRLDSGIYSTLIAALF 265
Query: 447 D-KNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ V VL EM +NG +P+ Y ++
Sbjct: 266 KVGRKDEVFV--VLEEMRENGCKPDTVTYNAMI 296
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 78/187 (41%), Gaps = 1/187 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN+LI C ++ EM + P +T+ ++ LC + + +A L E
Sbjct: 148 VCTYNVLINACCSSGSLGDAWNVFDEMLRKHVCPNVVTFGTLISGLCGDSRLDEAFRLKE 207
Query: 356 EMLGR-NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
+M+ N P+A Y + CRV + +AF +MV L+ ++ I F
Sbjct: 208 DMVKVFNVKPNAFVYASLMKGLCRVNELSLAFELKKEMVANKLRLDSGIYSTLIAALFKV 267
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
R ++ + + + + Y+ + S + A VL EM+ G +P+V Y
Sbjct: 268 GRKDEVFVVLEEMRENGCKPDTVTYNAMISGFCNEKDFEAAYGVLEEMVAKGCKPDVISY 327
Query: 475 RRVLKHL 481
++ L
Sbjct: 328 NVIISGL 334
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 78/192 (40%), Gaps = 1/192 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQV-GCEPITLTYNYVLGVLCKNGQDADACELL 354
V + LI +C L +M +V +P Y ++ LC+ + + A EL
Sbjct: 183 VVTFGTLISGLCGDSRLDEAFRLKEDMVKVFNVKPNAFVYASLMKGLCRVNELSLAFELK 242
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
+EM+ D+ Y I +VG+ D F +M + G +P T+ A I G+
Sbjct: 243 KEMVANKLRLDSGIYSTLIAALFKVGRKDEVFVVLEEMRENGCKPDTVTYNAMISGFCNE 302
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+E AY + K + Y+++ S K A ++ +M + G P+V Y
Sbjct: 303 KDFEAAYGVLEEMVAKGCKPDVISYNVIISGLCKEGKWREANDLFEDMPRRGCTPDVGSY 362
Query: 475 RRVLKHLHTSHQ 486
R + L Q
Sbjct: 363 RILFDGLCEGMQ 374
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 75/168 (44%), Gaps = 7/168 (4%)
Query: 234 GFLPVLISS--KALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMA-----K 286
G LI++ K K ++ V+E + + G A+I F +E A +
Sbjct: 255 GIYSTLIAALFKVGRKDEVFVVLEEMRENGCKPDTVTYNAMISGFCNEKDFEAAYGVLEE 314
Query: 287 YVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQ 346
V K + V YN++I +C+ ++ DL +M + GC P +Y + LC+ Q
Sbjct: 315 MVAKGCKPDVISYNVIISGLCKEGKWREANDLFEDMPRRGCTPDVGSYRILFDGLCEGMQ 374
Query: 347 DADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
+A +L+EM+ + P + + F+ C+ G ++ N +VK
Sbjct: 375 FNEAAFILDEMVFKGYAPKSASKTKFVEALCQEGNLELLCKVLNSLVK 422
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 85/182 (46%), Gaps = 1/182 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++ + C+ K L EMR+ G +TYN ++G LC+ + +A +++++M
Sbjct: 271 YNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMK 330
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+P+ ITY I C VGK A + + RGL P L T+ + G+
Sbjct: 331 SDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTS 390
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A K V ++ S + Y++L + +N A + S M + GL P+V Y VL
Sbjct: 391 GAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTY-SVL 449
Query: 479 KH 480
H
Sbjct: 450 IH 451
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 89/198 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI C L +++ G P +TYN ++ CK G + A ++++EM
Sbjct: 341 YNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEME 400
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R P ITY I I R+ + A + M + GL P + T++ I G+ I +
Sbjct: 401 ERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMN 460
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + L K + ++Y+ + + K + A + EM + L PNV+ YR ++
Sbjct: 461 EASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMI 520
Query: 479 KHLHTSHQEHMAKCLSSR 496
+ L + A+ L +
Sbjct: 521 EVLCKERKSKEAEGLVEK 538
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 98/223 (43%), Gaps = 5/223 (2%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
+EM K+ + E Y +LI + + K ++ +M++ G P TYN V+
Sbjct: 221 FFEMGKFGLVANEWT---YTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQ 277
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
CK+G+ DA +L +EM R + +TY I CR K + A +QM G+ P
Sbjct: 278 HCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPN 337
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
L T+ I G+ + A + S S + Y++L S K + A V+
Sbjct: 338 LITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVK 397
Query: 461 EMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLG 503
EM + G++P+ Y ++ + ++M K + R LG
Sbjct: 398 EMEERGIKPSKITYTILIDTF--ARMDNMEKAIQLRSPMEELG 438
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 83/188 (44%)
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
K + V + I+IK C + + DLLVE+R+ G P + Y ++ CK G+ A
Sbjct: 158 KVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKA 217
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+L EM + TY + I + G F + +M + G+ P L T+ +
Sbjct: 218 KDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQ 277
Query: 411 YFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
+ R +DA+K ++ S + + Y+ L + A V+ +M +G+ PN
Sbjct: 278 HCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPN 337
Query: 471 VSVYRRVL 478
+ Y ++
Sbjct: 338 LITYNTLI 345
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 69/187 (36%), Gaps = 13/187 (6%)
Query: 226 VCLNEKAFGFLPVLISSKALT--------KKGIWRVVEVLNQVGGSCLVSGVRALIEMFS 277
+C + K+ G P L++ L G +VV+ + + G LI+ F+
Sbjct: 360 LCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFA 419
Query: 278 VLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITL 332
+ E A + E V Y++LI C + L M EP +
Sbjct: 420 RMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKV 479
Query: 333 TYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
YN ++ CK G A L EM + P+ +Y I C+ K A +M
Sbjct: 480 IYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKM 539
Query: 393 VKRGLQP 399
+ G+ P
Sbjct: 540 IDTGIDP 546
>gi|125545643|gb|EAY91782.1| hypothetical protein OsI_13425 [Oryza sativa Indica Group]
Length = 406
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 106/241 (43%), Gaps = 22/241 (9%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERKVSY--------YNILIKEMCRRCDFKGPRDLLVEM 322
AL ++ LG + ++ + R + YN L+ +CR FK R LL +M
Sbjct: 135 ALTDVIRALGEEGLPRHALAAFHRARQFHCSPDAQCYNTLLAALCRNGRFKDARFLLDQM 194
Query: 323 RQVG--CEPITLTYNYVLGVLCKNGQDA-----------DACELLEEMLGRNCHPDAITY 369
+ G C P + TY ++ C+ G + +A L M + PD +TY
Sbjct: 195 ERPGARCGPDSYTYTVLISSYCRIGVETGCRKAARRRIYEAGRLFRRMGEKGLEPDVVTY 254
Query: 370 EIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV-VLSA 428
I C+ + + A F++M+++G P T+ +F++ Y + + A K++ + A
Sbjct: 255 NCLINGLCKTYRVERAHEVFDEMLRKGCSPNRVTYNSFVRYYSVVNEVDKAVKWMREMVA 314
Query: 429 DKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEH 488
+ +++ Y+ + ++ A+ + EM ++G P Y+ V + +H+E
Sbjct: 315 RGHGGATSSTYTPIIHSLCESGRISEARQFIIEMAESGHLPREHTYKLVKDEIEKAHEEA 374
Query: 489 M 489
+
Sbjct: 375 L 375
>gi|255660828|gb|ACU25583.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 418
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ +L EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G A + ++M +GL+P T+ I G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEG 325
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ A+++ + + Y+ L S + V A+ +L EM+ GL+P+ Y
Sbjct: 326 DLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDAEKMLREMLSVGLKPDARTYT 385
Query: 476 RVL 478
++
Sbjct: 386 MII 388
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 55/115 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN L+ R D L M G +P TY+ ++ LCK + DA EL +
Sbjct: 171 VVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFD 230
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
EML + P+ +T+ I C+ G+ D+A + QM+ + L P L T+ I G
Sbjct: 231 EMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 285
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 78/181 (43%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ C+ D + + + + + G P ++YN ++ + G + L M
Sbjct: 138 FFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAM 197
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
L PD TY + I C+ K D A F++M+ +GL P T I G+ R
Sbjct: 198 LASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRV 257
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ A + + S + Y+ L K + A +++ EM GL+P+ Y +
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTL 317
Query: 478 L 478
+
Sbjct: 318 I 318
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 77/184 (41%), Gaps = 3/184 (1%)
Query: 294 RKVSYYNILIKEMCRRCDFKGPRDLLVEMR---QVGCEPITLTYNYVLGVLCKNGQDADA 350
R YN ++ +CRR LL M C P ++Y ++ LC + A
Sbjct: 75 RDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQA 134
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
LL M D +TY I C + D A +M + G++P + +++ ++G
Sbjct: 135 VGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQG 194
Query: 411 YFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
Y R+ED K V ++K ++Y+ L K A V+ M++ GL PN
Sbjct: 195 YCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPN 254
Query: 471 VSVY 474
V Y
Sbjct: 255 VVTY 258
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 90/189 (47%), Gaps = 4/189 (2%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y LI+ +C + +L+ EM + G EP + Y+ +L CK+G+ D ++
Sbjct: 150 VVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFV 209
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM + PD + Y I C+VGK A + MV+RGL+P + T+ I
Sbjct: 210 EMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEG 269
Query: 416 RYEDAYKYVVLSADKYKSSSNMLY-SLLASLHDKNNNPVMAKNVLSEMM--KNGLRPNVS 472
++A + ++K + + Y +L+ L D A +L EM+ KN ++PNV
Sbjct: 270 SVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMD-EAMWLLEEMVRGKNIVKPNVV 328
Query: 473 VYRRVLKHL 481
+ V++ L
Sbjct: 329 TFNSVIQGL 337
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 134/322 (41%), Gaps = 59/322 (18%)
Query: 210 DYETMRQLLNDFNVYQVCLN--------EKAFGFLPVLISSKALTKKGIWRVVEVLNQVG 261
D R L + Y V +N ++A G L K +++KG+ V N
Sbjct: 244 DMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVL------KKMSEKGVAPDVVTYN--- 294
Query: 262 GSCLVSGVRALIEMFSVLGLYE---MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDL 318
L+ G+ ++EM + L E K ++K V +N +I+ +C + +
Sbjct: 295 --TLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPN---VVTFNSVIQGLCDIGRMRQAFQV 349
Query: 319 LVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCR 378
M + GC +TYN ++G L + + A EL++EM PD+ TY I I C+
Sbjct: 350 RAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCK 409
Query: 379 VGKFDVAFNFFNQMVKRGLQPRLATHAAFI----------KGYFIFYRYEDAYKYVVLS- 427
+ + D A + + M RG++P L + + + +F ++ + V++
Sbjct: 410 MWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAY 469
Query: 428 ---------ADKYKSSSNML--------------YSLLASLHDKNNNPVMAKNVLSEMMK 464
A K++ +L YS++ ++ K+ + A VL +M
Sbjct: 470 STMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTA 529
Query: 465 NGLRPNVSVYRRVLKHLHTSHQ 486
+G P+V+V+ +++ T +
Sbjct: 530 SGFLPDVAVFDSLIQGYSTKGE 551
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 93/213 (43%), Gaps = 4/213 (1%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V Y+ L++ C+ ++ + VEM + G EP + Y ++ LCK G+ A
Sbjct: 182 EPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHG 241
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+++ M+ R P+ +TY + I C+ G A +M ++G+ P + T+ IKG
Sbjct: 242 VMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLS 301
Query: 413 IFYRYEDAY---KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
++A + +V + K + S++ L D A V + M + G
Sbjct: 302 DVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMR-QAFQVRAMMEETGCMV 360
Query: 470 NVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSL 502
N+ Y ++ L H+ A L +SL L
Sbjct: 361 NLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGL 393
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 85/192 (44%), Gaps = 2/192 (1%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K E V Y LI +C+ K ++ M + G EP +TYN ++ +CK G +
Sbjct: 214 KGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKE 273
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV--KRGLQPRLATHAAF 407
A +L++M + PD +TY I V + D A +MV K ++P + T +
Sbjct: 274 AIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSV 333
Query: 408 IKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
I+G R A++ + + + + Y+LL + + A ++ EM GL
Sbjct: 334 IQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGL 393
Query: 468 RPNVSVYRRVLK 479
P+ Y ++K
Sbjct: 394 EPDSFTYSILIK 405
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 83/193 (43%), Gaps = 2/193 (1%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
M V + E V YN+LI MC+ K +L +M + G P +TYN ++ L
Sbjct: 243 MDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSD 302
Query: 344 NGQDADACELLEEML-GRN-CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
+ +A LLEEM+ G+N P+ +T+ I C +G+ AF M + G L
Sbjct: 303 VLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNL 362
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
T+ I G ++ A + + + YS+L K A+++LS
Sbjct: 363 VTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLST 422
Query: 462 MMKNGLRPNVSVY 474
M G+ P + Y
Sbjct: 423 MRDRGIEPELFHY 435
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/122 (21%), Positives = 53/122 (43%), Gaps = 4/122 (3%)
Query: 280 GLYEMAKYVIKKTER----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYN 335
G+ E A+ + + + V Y+ +I C+ D K ++LL + G P +TY+
Sbjct: 446 GMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYS 505
Query: 336 YVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR 395
V+ + K+G A +L++M PD ++ I G+ + +M+ +
Sbjct: 506 IVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITK 565
Query: 396 GL 397
+
Sbjct: 566 NI 567
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 83/180 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L++ +C+ F+ R + M GC P +Y+ ++ LC+ + +A ELL EM+
Sbjct: 55 YGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMI 114
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ +TY + C++GK A + F++MV RG P + I G+
Sbjct: 115 DGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMG 174
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+AY+ +K + Y+ L S + +++ +M++ G PN+ + +L
Sbjct: 175 EAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLL 234
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 89/196 (45%), Gaps = 6/196 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ILI +CR +LL EM G +P +TY +L LCK G+ +A +L M+
Sbjct: 90 YSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMV 149
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R C PD + Y + I + G A+ F +M+++G P + T+ + + G F R
Sbjct: 150 YRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSG---FSRKG 206
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHD---KNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ + L D + +L D K + V A + EM G P+V Y
Sbjct: 207 EFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYN 266
Query: 476 RVLKHLHTSHQEHMAK 491
+++ + + + H A+
Sbjct: 267 TLIRGMCSKGKPHEAQ 282
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 82/184 (44%), Gaps = 8/184 (4%)
Query: 299 YNILIKEMCR--RCD--FKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
YN L++ + + RCD + D+L GC P T TY Y+L LC+ + +A +
Sbjct: 20 YNYLLEVLAKSGRCDHVYGTYNDMLA----AGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
M + C P+ +Y I I CR K D A N+M+ G QP + T+ + + G
Sbjct: 76 RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ ++A + ++Y++L K + A + EM++ G P V Y
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTY 195
Query: 475 RRVL 478
+L
Sbjct: 196 NSLL 199
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 9/174 (5%)
Query: 244 ALTKKG----IWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK---- 295
+KKG +R+ E + + G V +L+ FS G + + + K R+
Sbjct: 166 GFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVP 225
Query: 296 -VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
+ +N L+ C+ D L +EMR +GC P ++YN ++ +C G+ +A LL
Sbjct: 226 NIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLL 285
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
EM+ PD ++Y I I + G D A F ++ K GL+P +++ I
Sbjct: 286 REMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTII 339
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 71/175 (40%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ R+ +F + L +M + GC P T+N +L CK G +A L EM
Sbjct: 195 YNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMR 254
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C PD ++Y I C GK A +M++ G+ P + ++ I GY +
Sbjct: 255 SLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALD 314
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
A K YS + + A V +M+ NG P+ +V
Sbjct: 315 HAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAV 369
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 80/199 (40%), Gaps = 6/199 (3%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI+ MC + + LL EM + G P ++YN ++ K+G A +L
Sbjct: 262 VVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFY 321
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
E+ PDA +Y I CR GK AF F M+ G P A + G
Sbjct: 322 EIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIG---LC 378
Query: 416 RYEDAYKYVVLSADKYKSSSNML---YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
R E + L K L Y+LL K + E+ + G P+V
Sbjct: 379 RGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVE 438
Query: 473 VYRRVLKHLHTSHQEHMAK 491
+ + +L+ L S + A+
Sbjct: 439 ISKVILETLRRSDDKDAAE 457
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 109/236 (46%), Gaps = 10/236 (4%)
Query: 249 GIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAK---YVIKK--TERKVSYYNILI 303
G+ +++ + G SC +I + +GL E A Y I++ + V YN L+
Sbjct: 97 GVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLL 156
Query: 304 KEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH 363
M F+ + M++ G EP TYN +L LCKN + AC+LL EM + C
Sbjct: 157 DAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCE 216
Query: 364 PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY 423
PD ++Y I ++GK + A ++ R QP ++ + A I G+ Y+ ++ +
Sbjct: 217 PDVVSYTTVISSMSKLGKVEEA----RELSIR-FQPNVSVYNALINGFCREYKVKEVFLL 271
Query: 424 VVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
+ +K + + YS + S N +A V ++M G PNV + ++K
Sbjct: 272 LGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMK 327
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 99/234 (42%), Gaps = 11/234 (4%)
Query: 252 RVVEVLN------QVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYN 300
RV+E LN + G V LI G A V K ER VS Y
Sbjct: 334 RVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYG 393
Query: 301 ILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGR 360
LI + D G ++ +M GC P + Y ++ VLC++ + A L+E+M
Sbjct: 394 ALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTD 453
Query: 361 NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
NC P+ +T+ FI C G+ + A N F QM + G P + T+ + G R ++A
Sbjct: 454 NCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEA 513
Query: 421 YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ V +K + + Y+ + A +L +M+ G++P+ Y
Sbjct: 514 LELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITY 567
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 99/230 (43%), Gaps = 2/230 (0%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPI 330
+I S LG E A+ + + + VS YN LI CR K LL +M + G +P
Sbjct: 224 TVISSMSKLGKVEEARELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPN 283
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN 390
+TY+ V+ L G A + +M R C P+ T+ + G+ A N +N
Sbjct: 284 VITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWN 343
Query: 391 QMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM-LYSLLASLHDKN 449
+M + G +P + + I G + +A V ++ S N+ Y L K
Sbjct: 344 RMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVS-VSSKMERNGCSPNVSTYGALIDGFAKA 402
Query: 450 NNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSS 499
+ V A + ++MM NG PNV VY ++ L S A L + S+
Sbjct: 403 GDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMST 452
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N IK +C + +L +M Q GC P TYN VL L K + +A EL+ EM
Sbjct: 462 FNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEME 521
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
+ + +TY C VGKF+ A +M+ G++P T+ Y
Sbjct: 522 EKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAY 574
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 1/130 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ YN ++ + + K +L+ EM + G E +TYN + G C G+ +A +LL
Sbjct: 494 IKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLG 553
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG-LQPRLATHAAFIKGYFIF 414
+ML PDAITY C GK A +++ G P +A + + + G
Sbjct: 554 KMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQ 613
Query: 415 YRYEDAYKYV 424
E+A Y+
Sbjct: 614 IGVEEAVLYL 623
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y L+ +C+ +LL M GCEP + Y+ ++ CK G+ A E+
Sbjct: 444 VVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFL 503
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M P TY I + G+ D+A +QM+K P + T+ A I G
Sbjct: 504 QMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIG 563
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A K + L +K S + + Y+ L K ++ ++ ++M + G PN YR
Sbjct: 564 ESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYR 623
Query: 476 RVLKHL 481
++ HL
Sbjct: 624 VLINHL 629
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 85/211 (40%), Gaps = 16/211 (7%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y ILI C+ + + L EMR VGC P +TY ++ K Q A ++
Sbjct: 323 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 382
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV----------------KRGLQP 399
M+ C P+ +TY + C+ G AF + +++ + L P
Sbjct: 383 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAP 442
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
+ T+ A + G ++ + A++ + ++++Y L K A+ V
Sbjct: 443 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 502
Query: 460 SEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
+M K G P+V Y ++ + + +A
Sbjct: 503 LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLA 533
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 83/199 (41%), Gaps = 28/199 (14%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQD----ADACE 352
S +N L+ C D+ LL M GC P + YN +G +C GQ+ D +
Sbjct: 178 SLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSIC--GQEKLPSPDLLD 235
Query: 353 LLE----EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT----- 403
L E EML NC + + F C VGKFD AF +M+++G P +T
Sbjct: 236 LAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVI 295
Query: 404 ----HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
HA ++ F+ ++ K V ++ D Y Y++L K A+ +
Sbjct: 296 TFLCHATKVEKAFLLFQ---EMKMVGVTPDVYT------YTILIDSFCKAGLIEQAQWLF 346
Query: 460 SEMMKNGLRPNVSVYRRVL 478
EM G P V Y ++
Sbjct: 347 EEMRSVGCSPTVVTYTALI 365
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 5/143 (3%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI+ F G + A+ V + + V Y LI M + +L +M +
Sbjct: 484 ALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD 543
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
C P +TY ++ LC+ G+ A +LL M + C P+ +TY I + GK D++
Sbjct: 544 SCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLS 603
Query: 386 FNFFNQMVKRGLQPRLATHAAFI 408
+ F QM ++G P T+ I
Sbjct: 604 LDLFTQMSRKGCSPNYVTYRVLI 626
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 68/153 (44%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P +TY ++ LCK + A ELL+ ML C P+ I Y+ I C+ GK D A
Sbjct: 442 PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 501
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
F QM K G P + T+ + I F R + A K + + + + Y+ + +
Sbjct: 502 FLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCR 561
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A +LS M + G PNV Y ++ L
Sbjct: 562 IGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 594
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 91/221 (41%), Gaps = 21/221 (9%)
Query: 279 LGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLT 333
+G ++ A +IK+ RK S Y+ +I +C + L EM+ VG P T
Sbjct: 266 VGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYT 325
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
Y ++ CK G A L EEM C P +TY I + + A + F++MV
Sbjct: 326 YTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMV 385
Query: 394 KRGLQPRLATHAAFIKGYF----IFYRYEDAYKYVVLS-----------ADKYKSSSNML 438
G +P T+ A + G I +E K + S D++ + N++
Sbjct: 386 DAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVV 445
Query: 439 -YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
Y L K + A +L M+ +G PN VY ++
Sbjct: 446 TYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALI 486
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 82/211 (38%), Gaps = 17/211 (8%)
Query: 306 MCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPD 365
+C F L+ EM + G P T TY+ V+ LC + A L +EM PD
Sbjct: 263 LCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 322
Query: 366 AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV 425
TY I I C+ G + A F +M G P + T+ A I Y + A
Sbjct: 323 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 382
Query: 426 LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM----------------KNGLRP 469
D +++ Y L K N A V ++++ ++ L P
Sbjct: 383 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAP 442
Query: 470 NVSVYRRVLKHLHTSHQ-EHMAKCLSSRYSS 499
NV Y ++ L +H+ +H + L + SS
Sbjct: 443 NVVTYGALVDGLCKAHKVDHAHELLDAMLSS 473
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 69/162 (42%), Gaps = 13/162 (8%)
Query: 270 RALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKG-------PRDLLVEM 322
R LI GL + A+ ++ E K +Y+ ++ RC +G +L EM
Sbjct: 623 RVLINHLCAAGLLDKARLLLG--EMKQTYWPKYLQGY--RCAIQGFSKSFIASLGILEEM 678
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG--RNCHPDAITYEIFIVYSCRVG 380
G PI Y ++ K G+ A EL +EM+ + D Y I C
Sbjct: 679 ESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLAS 738
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
+ + AF +++M +RG P L+ IKG ++++A +
Sbjct: 739 QVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQ 780
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 85/222 (38%), Gaps = 37/222 (16%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y +I +CR + + LL M + GC P +TY ++ L K G+ + +L
Sbjct: 549 VVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFT 608
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVA------------------------------ 385
+M + C P+ +TY + I + C G D A
Sbjct: 609 QMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSF 668
Query: 386 ---FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA---YKYVVLSADKYKSSSNMLY 439
+M G P + I + R E A +K ++ K+ ++M
Sbjct: 669 IASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYA 728
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
SL+ +L + A + SEM + G P +SV+ ++K L
Sbjct: 729 SLIQALCLASQVE-EAFRLYSEMTRRGFVPELSVFVCLIKGL 769
>gi|242045394|ref|XP_002460568.1| hypothetical protein SORBIDRAFT_02g030880 [Sorghum bicolor]
gi|241923945|gb|EER97089.1| hypothetical protein SORBIDRAFT_02g030880 [Sorghum bicolor]
Length = 389
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 63/124 (50%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ++ +CR+ + LL MR G P + YN V+ +C+ G+ DAC+++ +M+
Sbjct: 225 YTTVLNALCRKKQLREAYRLLCLMRGRGVSPDIVHYNTVIVGMCREGRPLDACKVVGDMM 284
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C P+A+TY + C G +D A + MV +GL P + + IKG + E
Sbjct: 285 ESGCTPNAVTYATVVNGLCVSGLYDKAETYLVDMVGKGLVPHFSVFHSVIKGCCTVGKVE 344
Query: 419 DAYK 422
+A +
Sbjct: 345 EAAQ 348
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 57/127 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y IL + +CR+ + LL EM G L Y VL LC+ Q +A LL M
Sbjct: 190 YRILTQSLCRKAQVRTAATLLDEMLHRGIPADPLAYTTVLNALCRKKQLREAYRLLCLMR 249
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
GR PD + Y IV CR G+ A M++ G P T+A + G + Y+
Sbjct: 250 GRGVSPDIVHYNTVIVGMCREGRPLDACKVVGDMMESGCTPNAVTYATVVNGLCVSGLYD 309
Query: 419 DAYKYVV 425
A Y+V
Sbjct: 310 KAETYLV 316
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 79/192 (41%), Gaps = 16/192 (8%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
++ +N+LI R L +R + P TY + LC+ Q A LL+
Sbjct: 152 LASHNLLIDAAARSGHVAVSLSLFHRLRSLHVSPDADTYRILTQSLCRKAQVRTAATLLD 211
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EML R D + Y + CR + A+ M RG+ P + + I G
Sbjct: 212 EMLHRGIPADPLAYTTVLNALCRKKQLREAYRLLCLMRGRGVSPDIVHYNTVIVGMCREG 271
Query: 416 RYEDAYKYV--------VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
R DA K V +A Y + N L ++ L+DK A+ L +M+ GL
Sbjct: 272 RPLDACKVVGDMMESGCTPNAVTYATVVNGL--CVSGLYDK------AETYLVDMVGKGL 323
Query: 468 RPNVSVYRRVLK 479
P+ SV+ V+K
Sbjct: 324 VPHFSVFHSVIK 335
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 66/154 (42%), Gaps = 1/154 (0%)
Query: 329 PITL-TYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
P+ L ++N ++ ++G A + L + + PDA TY I CR + A
Sbjct: 149 PLVLASHNLLIDAAARSGHVAVSLSLFHRLRSLHVSPDADTYRILTQSLCRKAQVRTAAT 208
Query: 388 FFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHD 447
++M+ RG+ + + + +AY+ + L + S + Y+ +
Sbjct: 209 LLDEMLHRGIPADPLAYTTVLNALCRKKQLREAYRLLCLMRGRGVSPDIVHYNTVIVGMC 268
Query: 448 KNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ P+ A V+ +MM++G PN Y V+ L
Sbjct: 269 REGRPLDACKVVGDMMESGCTPNAVTYATVVNGL 302
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 77/184 (41%), Gaps = 3/184 (1%)
Query: 294 RKVSYYNILIKEMCRRCDFKGPRDLLVEMR---QVGCEPITLTYNYVLGVLCKNGQDADA 350
R YN ++ +CRR LL M C P ++Y ++ LC + A
Sbjct: 75 RDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQA 134
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
LL M D +TY I C + D A +M + G++P + +++ ++G
Sbjct: 135 VGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQG 194
Query: 411 YFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
Y R+ED K V ++K ++Y+ L K A V+ M++ GL PN
Sbjct: 195 YCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPN 254
Query: 471 VSVY 474
V Y
Sbjct: 255 VVTY 258
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 90/189 (47%), Gaps = 4/189 (2%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y LI+ +C + +L+ EM + G EP + Y+ +L CK+G+ D ++
Sbjct: 150 VVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFV 209
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM + PD + Y I C+VGK A + MV+RGL+P + T+ I
Sbjct: 210 EMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEG 269
Query: 416 RYEDAYKYVVLSADKYKSSSNMLY-SLLASLHDKNNNPVMAKNVLSEMM--KNGLRPNVS 472
++A + ++K + + Y +L+ L D A +L EM+ KN ++PNV
Sbjct: 270 SVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMD-EAMWLLEEMVRGKNIVKPNVV 328
Query: 473 VYRRVLKHL 481
+ V++ L
Sbjct: 329 TFNSVIQGL 337
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 134/322 (41%), Gaps = 59/322 (18%)
Query: 210 DYETMRQLLNDFNVYQVCLN--------EKAFGFLPVLISSKALTKKGIWRVVEVLNQVG 261
D R L + Y V +N ++A G L K +++KG+ V N
Sbjct: 244 DMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVL------KKMSEKGVAPDVVTYNT-- 295
Query: 262 GSCLVSGVRALIEMFSVLGLYE---MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDL 318
L+ G+ ++EM + L E K ++K V +N +I+ +C + +
Sbjct: 296 ---LIKGLSDVLEMDEAMWLLEEMVRGKNIVKPN---VVTFNSVIQGLCDIGRMRQAFQV 349
Query: 319 LVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCR 378
M + GC +TYN ++G L + + A EL++EM PD+ TY I I C+
Sbjct: 350 RAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCK 409
Query: 379 VGKFDVAFNFFNQMVKRGLQPRLATHAAFI----------KGYFIFYRYEDAYKYVVLS- 427
+ + D A + + M RG++P L + + + +F ++ + V++
Sbjct: 410 MWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAY 469
Query: 428 ---------ADKYKSSSNML--------------YSLLASLHDKNNNPVMAKNVLSEMMK 464
A K++ +L YS++ ++ K+ + A VL +M
Sbjct: 470 STMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTA 529
Query: 465 NGLRPNVSVYRRVLKHLHTSHQ 486
+G P+V+V+ +++ T +
Sbjct: 530 SGFLPDVAVFDSLIQGYSTKGE 551
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 93/213 (43%), Gaps = 4/213 (1%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V Y+ L++ C+ ++ + VEM + G EP + Y ++ LCK G+ A
Sbjct: 182 EPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHG 241
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+++ M+ R P+ +TY + I C+ G A +M ++G+ P + T+ IKG
Sbjct: 242 VMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLS 301
Query: 413 IFYRYEDAY---KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
++A + +V + K + S++ L D A V + M + G
Sbjct: 302 DVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMR-QAFQVRAMMEETGCMV 360
Query: 470 NVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSL 502
N+ Y ++ L H+ A L +SL L
Sbjct: 361 NLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGL 393
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 85/192 (44%), Gaps = 2/192 (1%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K E V Y LI +C+ K ++ M + G EP +TYN ++ +CK G +
Sbjct: 214 KGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKE 273
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV--KRGLQPRLATHAAF 407
A +L++M + PD +TY I V + D A +MV K ++P + T +
Sbjct: 274 AIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSV 333
Query: 408 IKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
I+G R A++ + + + + Y+LL + + A ++ EM GL
Sbjct: 334 IQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGL 393
Query: 468 RPNVSVYRRVLK 479
P+ Y ++K
Sbjct: 394 EPDSFTYSILIK 405
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 82/190 (43%), Gaps = 2/190 (1%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
M V + E V YN+LI MC+ K +L +M + G P +TYN ++ L
Sbjct: 243 MDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSD 302
Query: 344 NGQDADACELLEEML-GRN-CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
+ +A LLEEM+ G+N P+ +T+ I C +G+ AF M + G L
Sbjct: 303 VLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNL 362
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
T+ I G ++ A + + + YS+L K A+++LS
Sbjct: 363 VTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLST 422
Query: 462 MMKNGLRPNV 471
M G+ P +
Sbjct: 423 MRDRGIEPEL 432
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/122 (21%), Positives = 53/122 (43%), Gaps = 4/122 (3%)
Query: 280 GLYEMAKYVIKKTER----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYN 335
G+ E A+ + + + V Y+ +I C+ D K ++LL + G P +TY+
Sbjct: 446 GMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYS 505
Query: 336 YVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR 395
V+ + K+G A +L++M PD ++ I G+ + +M+ +
Sbjct: 506 IVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITK 565
Query: 396 GL 397
+
Sbjct: 566 NI 567
>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 579
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 83/178 (46%), Gaps = 9/178 (5%)
Query: 245 LTKKGIW-RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILI 303
+ KKG+ VV + G CLV+ V + +F+V+ V + E V YNI+I
Sbjct: 208 MMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVM--------VQEGVEPNVWCYNIII 259
Query: 304 KEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH 363
+C++ +L EM P +TYN ++ LCK G+ + + EL++EM
Sbjct: 260 NGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKT 319
Query: 364 PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
D ITY + C+ D A ++ +G+QP + T+ I G R EDAY
Sbjct: 320 VDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAY 377
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 58/121 (47%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
KK V YNILI +C+ +L+ EMR +G +TYN +L LCKN
Sbjct: 281 KKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQ 340
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A L++E+ + P+ TY I C+ G+ + A+ F +++ G + T+ I
Sbjct: 341 AITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMIN 400
Query: 410 G 410
G
Sbjct: 401 G 401
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 80/186 (43%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V ++IL+ +C+ K +LL M + G +P +TY ++ C Q A +
Sbjct: 182 VYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFN 241
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+ P+ Y I I C+ + D A N F +M + + P + T+ I G
Sbjct: 242 VMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLG 301
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ + + V K+ + Y+ L KN++ A ++ E+ G++PNV Y
Sbjct: 302 KISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYT 361
Query: 476 RVLKHL 481
++ L
Sbjct: 362 TLIDGL 367
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 79/183 (43%), Gaps = 3/183 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y IL+ +C+ + + +L R+ + Y+ ++ LCK DA L EM+
Sbjct: 118 YAILMNGLCKMGETRAAMQML---RKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMI 174
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+ T+ I + C+ K A N M+K+G++P + T+ A + GY + +
Sbjct: 175 AKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVN 234
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + + + Y+++ + K A N+ EM + P+V Y ++
Sbjct: 235 KALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILI 294
Query: 479 KHL 481
L
Sbjct: 295 DGL 297
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 76/165 (46%), Gaps = 11/165 (6%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
+L ++ ++G EP ++T+ ++ +C NGQ +A + ++ D ++Y I + C
Sbjct: 67 ILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLC 126
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFI----KGYFIFYRYEDAYKYVVLSADKYKS 433
++G+ A K + + ++ I KG F+ DAY+ K
Sbjct: 127 KMGETRAAMQMLR---KTWVNADVVMYSTIIDSLCKGKFV----TDAYRLYSEMIAKGIF 179
Query: 434 SSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ +S+L K+ A N+L+ MMK G++PNV Y ++
Sbjct: 180 PNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIM 224
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 44/106 (41%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y LI +C+ + + E+ G TYN ++ LCK G +A LL
Sbjct: 357 VCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLS 416
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
M C PDA++YE I G+ M+ RGL RL
Sbjct: 417 RMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRGLSKRL 462
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +N L+ C+ D R+LL M + GC P +TY+ ++ LC+ G LLE
Sbjct: 228 VVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLE 287
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+M+ R C PD +TY + + C+ GK A +M++ G P T++ G
Sbjct: 288 KMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDG 342
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 88/224 (39%), Gaps = 37/224 (16%)
Query: 292 TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQ-VGCEPITLTYNYVLGVLCKNGQDADA 350
T YN +I C+ + L EM+Q GC P T TY+ ++ LCK+ A
Sbjct: 152 TTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKA 211
Query: 351 CELLEEMLGR------------------------------------NCHPDAITYEIFIV 374
ELL+EM+GR C PD +TY I
Sbjct: 212 DELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIID 271
Query: 375 YSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSS 434
CR G D F +MV RG +P + T+ + G + +A + V + +
Sbjct: 272 GLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTP 331
Query: 435 SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ + YSL+ K + MA ++L+ + G +V + +L
Sbjct: 332 NAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLL 375
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEM-RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
Y +L++ C + + DLL EM +Q G P YN+ + LCK+G+ +A E+++ M
Sbjct: 21 YFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNM 80
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
C PD +T+ I C+ G+ D A ++M + G L T+ I G
Sbjct: 81 KDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLING 133
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 90/219 (41%), Gaps = 34/219 (15%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
S YN + +C+ +++ M+ C+P +T+N ++ LCK G+ +A ++L+E
Sbjct: 55 SMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDE 114
Query: 357 --------------------------------MLGRNCHPDAITYEIFIVYSCRVGKFDV 384
M G PD TY I C+ G+ D
Sbjct: 115 MERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDR 174
Query: 385 AFNFFNQMVKR-GLQPRLATHAAFIKGYFIFYRYEDAYKYVV-LSADKYKSSSNMLYSLL 442
A+ F +M +R G P T++ I G A + + + K +S + ++ L
Sbjct: 175 AYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTL 234
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ K + A+ +LS M+++G P+V Y ++ L
Sbjct: 235 VDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGL 273
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 80/183 (43%), Gaps = 1/183 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C L V M+ C P TY ++ LC+ A LL+EML
Sbjct: 261 YNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKNVHK-AMGLLDEML 319
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
RN PD ITY I CR G D A+ + M +RGL P T+ FI R E
Sbjct: 320 ERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVE 379
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + ++ S++ ++YS+L + K A + +M+ PN + ++
Sbjct: 380 EARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALI 439
Query: 479 KHL 481
L
Sbjct: 440 HGL 442
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 115/261 (44%), Gaps = 18/261 (6%)
Query: 199 SLVIDNC--GRLDDYETMRQLLNDFNVYQVCLNEKAFG-FLPVLISSKALTKKGIWRVVE 255
SL+ C G LD + L+ + + +++ +G F+ L S + + R+ +
Sbjct: 332 SLIAGQCRAGHLDSAYRLLSLMKERGLVP---DQRTYGCFIDFLCKSNRVEEA--RRLFD 386
Query: 256 VLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRC 310
L + G S V LI+ + +G + A + +K K +N LI +C
Sbjct: 387 SLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAG 446
Query: 311 DFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYE 370
+ K L +M ++G +P T+N ++G + K G DA + L++M+ P A TY
Sbjct: 447 NLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYN 506
Query: 371 IFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY---FIFYRYEDAYKYVVLS 427
FI C GK A + QM + G+ P T+ + IK Y + Y D K +
Sbjct: 507 AFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLK-SMFD 565
Query: 428 ADKYKSSSNMLYSLLASLHDK 448
AD + S + SL+ L DK
Sbjct: 566 AD-CEPSHHTFLSLIKQLFDK 585
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 80/194 (41%), Gaps = 4/194 (2%)
Query: 292 TERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQD 347
TE VS Y++LI C+ L +M C P T+N ++ LC G
Sbjct: 389 TEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNL 448
Query: 348 ADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAF 407
+A L ++M+ P T+ I I + G FD A +M+ G +P T+ AF
Sbjct: 449 KEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAF 508
Query: 408 IKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
I+ Y + ++A +V ++ + Y+ L + K A +VL M
Sbjct: 509 IEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADC 568
Query: 468 RPNVSVYRRVLKHL 481
P+ + ++K L
Sbjct: 569 EPSHHTFLSLIKQL 582
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 1/143 (0%)
Query: 332 LTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQ 391
++YN ++ LC+ G+ +A L M C+P+ TY I CR A ++
Sbjct: 259 VSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCR-KNVHKAMGLLDE 317
Query: 392 MVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNN 451
M++R L P L T+ + I G + AY+ + L ++ Y K+N
Sbjct: 318 MLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNR 377
Query: 452 PVMAKNVLSEMMKNGLRPNVSVY 474
A+ + + + G+ NV +Y
Sbjct: 378 VEEARRLFDSLTEEGVSANVIMY 400
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 5/132 (3%)
Query: 286 KYVIKKT-----ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
+YV++K+ E ++ ++ M + +F +L EM + GC P + Y ++
Sbjct: 586 RYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISG 645
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
+CK A +LL++M P + + I C++ K+ A N M+ G P+
Sbjct: 646 ICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQ 705
Query: 401 LATHAAFIKGYF 412
L I G +
Sbjct: 706 LEHCKTLICGLY 717
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 75/179 (41%), Gaps = 10/179 (5%)
Query: 309 RCDFKGPRDLLVE--MRQVGCEPITLT----YNYVLGVLCKNGQDADACELLEEMLGRNC 362
+C + P L V R++ + IT YN +L +L + G + +L EML
Sbjct: 129 KCCYSAPDALFVSDICRKMSKDDITKLSLKCYNELLTLLARFGLVDEMNQLYTEMLEEFV 188
Query: 363 HPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
D T+ + I C++G A F +M++ GL P T +FI GY + A++
Sbjct: 189 SMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFR 248
Query: 423 YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
++ + S N L L + A ++ M + PNV Y ++K L
Sbjct: 249 VFEEMPNRNEVSYNQLIHGLCEAGRIDE----AVSLFVRMKDDCCYPNVYTYTALIKGL 303
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 31/73 (42%)
Query: 352 ELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
EL EEM C PD+ YE I C+V +A +QM K G+ P A I
Sbjct: 622 ELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCC 681
Query: 412 FIFYRYEDAYKYV 424
+Y +A V
Sbjct: 682 CKLQKYGEAANIV 694
>gi|414591646|tpg|DAA42217.1| TPA: hypothetical protein ZEAMMB73_097907 [Zea mays]
Length = 476
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 86/196 (43%), Gaps = 14/196 (7%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVG--CEPITLTYNYVLGVLCKNGQDADACEL 353
VS YNIL+K +C + DLL M + G C P + Y V+ K G AC+L
Sbjct: 182 VSSYNILLKSLCNQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDGFFKEGDVNKACDL 241
Query: 354 LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
+EM+ R PD +TY + C+ D A F QMV +G+ P T+ I GY
Sbjct: 242 FKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSS 301
Query: 414 FYRYEDAYKYVVLSADKYKSSSNMLY------SLLASLHDKNNNPVMAKNVLSEMMKNGL 467
++++A + K N+L +L+ SL K A++V M G
Sbjct: 302 TGQWKEAVRVF-----KEMRRHNILLDVVNLNTLMGSLC-KYGKIKEARDVFDTMAMKGQ 355
Query: 468 RPNVSVYRRVLKHLHT 483
PNV Y +L T
Sbjct: 356 NPNVFSYTIMLNGYAT 371
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 3/112 (2%)
Query: 300 NILIKEMCRRCDFKGPRDLLV-EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
N L+K C D+L+ ++GC P +YN +L LC G+ A +LL M
Sbjct: 150 NHLLKGFCEAKRTDEALDILLHRTPELGCVPDVSSYNILLKSLCNQGKSGQADDLLRMMA 209
Query: 359 --GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
G C PD + Y I + G + A + F +MV+RG+ P T+++ +
Sbjct: 210 EGGAVCSPDVVAYTTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVV 261
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 4/161 (2%)
Query: 263 SCLVSGVRALIEMFSVLGLY-EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
+CL+ G + L L+ E+ K+ I V Y+ILIK +C + LL E
Sbjct: 337 NCLIDGYCKAGNLSEALSLHSEIEKHEILP---DVFTYSILIKGLCGVDRMEEADGLLQE 393
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M++ G P +TYN ++ CK G A E+ +M + P+ IT+ I C+ GK
Sbjct: 394 MKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGK 453
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
+ A + +MV +GL P + + A I G+F ++A++
Sbjct: 454 MEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFR 494
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 77/183 (42%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V + ILI +C+ + R L++M G P YN ++ CK G ++A L
Sbjct: 298 VVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHS 357
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
E+ PD TY I I C V + + A +M K+G P T+ I GY
Sbjct: 358 EIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEG 417
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A + +K + + +S L + K A + +EM+ GL P+V Y
Sbjct: 418 NMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYT 477
Query: 476 RVL 478
++
Sbjct: 478 ALI 480
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 118/293 (40%), Gaps = 23/293 (7%)
Query: 199 SLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAF-----GFLPVLISSKALTKKGIWRV 253
++ID + D+ + R+ L D + V N + G+ S+AL+
Sbjct: 302 GILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEK 361
Query: 254 VEVLNQVGG-SCLVSGVRALIEMFSVLGLY-EMAKYVIKKTERKVSYYNILIKEMCRRCD 311
E+L V S L+ G+ + M GL EM K K YN LI C+ +
Sbjct: 362 HEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKK---KGFLPNAVTYNTLIDGYCKEGN 418
Query: 312 FKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEI 371
+ ++ +M + G EP +T++ ++ CK G+ A L EM+ + PD + Y
Sbjct: 419 MEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTA 478
Query: 372 FIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV--LSAD 429
I + G AF +M + GL P + T + I G R DA K + D
Sbjct: 479 LIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTD 538
Query: 430 KYKSSSN-----------MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
S +N ++Y+ L + A S+M +GLRP+V
Sbjct: 539 TTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDV 591
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 97/245 (39%), Gaps = 11/245 (4%)
Query: 244 ALTKKG----IWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMA-----KYVIKKTER 294
L KKG +W+V + G S V LI+ G + A + + KK
Sbjct: 167 GLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFP 226
Query: 295 KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
V Y ILI+ +C + MR G P TYN ++ CK A EL
Sbjct: 227 TVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELY 286
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
+EMLG P+ +T+ I I C+ + A F M G+ P + + I GY
Sbjct: 287 QEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKA 346
Query: 415 YRYEDAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
+A + +K++ ++ YS+L + A +L EM K G PN
Sbjct: 347 GNLSEALS-LHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVT 405
Query: 474 YRRVL 478
Y ++
Sbjct: 406 YNTLI 410
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 134/348 (38%), Gaps = 78/348 (22%)
Query: 186 EIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKAL 245
EI+P+ + S L+ CG +D E LL + K GFLP ++ L
Sbjct: 363 EILPDVFTYS---ILIKGLCG-VDRMEEADGLLQEM---------KKKGFLPNAVTYNTL 409
Query: 246 T----KKG-IWRVVEVLNQ----------VGGSCLVSGVRALIEMFSVLGLYEMAKYVIK 290
K+G + + +EV +Q + S L+ G +M + +GLY + VIK
Sbjct: 410 IDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLY--TEMVIK 467
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
V Y LI + + K L EM++ G P T + ++ LCK+G+ +DA
Sbjct: 468 GLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDA 527
Query: 351 CELLEEMLGRN-------------CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
+L G + C P+ + Y I C G+ A FF+ M GL
Sbjct: 528 IKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGL 587
Query: 398 QPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKN 457
+P + T I+G+F D ++L AD
Sbjct: 588 RPDVFTCIVIIQGHFRAMHLRDV---MMLQAD---------------------------- 616
Query: 458 VLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSS 505
++K G+ PN SVYR + K S A S S + +G S
Sbjct: 617 ----ILKMGIIPNSSVYRVLAKGYEESGYLKSALRCSEDLSGIGIGCS 660
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 83/169 (49%), Gaps = 8/169 (4%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
G CLV+ + + FS++ L + Y E V YN LI +C+ + +LL E
Sbjct: 150 GFCLVNRIG---DAFSLVILMVKSGY-----EPNVVVYNTLIDGLCKNGELNIALELLNE 201
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M + G +TYN +L LC +G+ +DA +L +M+ R+ +PD +T+ I + G
Sbjct: 202 MEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGN 261
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADK 430
D A + +M++ + P T+ + I G + R DA K L A K
Sbjct: 262 LDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASK 310
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 11/208 (5%)
Query: 282 YEMAKYVIKKTE-----RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNY 336
YE Y +K E + + ILI CR +L +M ++G EP +T+
Sbjct: 87 YETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGS 146
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
+L C + DA L+ M+ P+ + Y I C+ G+ ++A N+M K+G
Sbjct: 147 LLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKG 206
Query: 397 LQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN---MLYSLLASLHDKNNNPV 453
L + T+ + G R+ DA + + D K S N + ++ L + K N
Sbjct: 207 LGADVVTYNTLLTGLCYSGRWSDAARML---RDMMKRSINPDVVTFTALIDVFVKQGNLD 263
Query: 454 MAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A+ + EM+++ + PN Y ++ L
Sbjct: 264 EAQELYKEMIQSSVDPNNVTYNSIINGL 291
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 66/148 (44%), Gaps = 11/148 (7%)
Query: 271 ALIEMFSVLGLYEMAKYVIKK-----TERKVSYYNILIKEMC---RRCDFKGPRDLLVEM 322
ALI++F G + A+ + K+ + YN +I +C R D K DL M
Sbjct: 251 ALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDL---M 307
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
GC P +TYN ++ CK + +L + M + D TY I C+VGK
Sbjct: 308 ASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKL 367
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKG 410
VA + F MV R + P + TH + G
Sbjct: 368 RVALDIFCWMVSRRVTPDIITHCILLHG 395
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 52/116 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V + LI ++ + ++L EM Q +P +TYN ++ LC +G+ DA + +
Sbjct: 246 VVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFD 305
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
M + C P+ +TY I C+ D F +M G + T+ I GY
Sbjct: 306 LMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGY 361
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 47/112 (41%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI C+ + D+ M P +T+ +L LC NG+ A ++M
Sbjct: 354 YNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMR 413
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ + Y I I C+ K + A+ F ++ G++P T+ I G
Sbjct: 414 ESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILG 465
>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
Length = 783
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 82/180 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++ + +R + RDLL++M+ G P TYN ++ C+ G +A +++E M
Sbjct: 251 YNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMT 310
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
N P TY + + C GK D AF ++M K + P + T+ I G +
Sbjct: 311 RNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSS 370
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ Y + K + + Y+++ K N A L +M +NGL P+ Y ++
Sbjct: 371 EVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLI 430
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 82/180 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNI++K MC++ + L +M + G P +TYN ++G CK G+ A +++EM
Sbjct: 391 YNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMT 450
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ D T + C K D A+N KRG ++ I GYF + +
Sbjct: 451 SKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGD 510
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A ++ S + Y+ + ++ A + L+EM++NGL P+ + Y ++
Sbjct: 511 RALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIII 570
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 2/173 (1%)
Query: 311 DFKGPR--DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAIT 368
D KG R +L EM++ P T+TYN V+G LC++ + A + L EML PD T
Sbjct: 506 DEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETT 565
Query: 369 YEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSA 428
Y I I C G + AF F N+M++ +P + T ++G E A K
Sbjct: 566 YNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLV 625
Query: 429 DKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K K + Y+ + S K A ++L+EM L P+ Y+ ++ L
Sbjct: 626 SKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAAL 678
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI + D L+ EM + G + +TYN +L +CK G +A L+
Sbjct: 353 VVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLD 412
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M PD +TY I C+ GK AF ++M +GL+ T + +
Sbjct: 413 KMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEK 472
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ ++AY + ++ + + Y +L + K+ A N+ EM + + P+ Y
Sbjct: 473 KLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYN 532
Query: 476 RVLKHLHTSHQEHMA 490
V+ L S + A
Sbjct: 533 SVIGGLCQSRKVDQA 547
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 62/150 (41%), Gaps = 1/150 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I +C+ D L EM + G P TYN ++ C G A + EM+
Sbjct: 531 YNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMI 590
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD T I + CR G + A FN +V +G + T+ I ++E
Sbjct: 591 ENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFE 650
Query: 419 DAYKYVV-LSADKYKSSSNMLYSLLASLHD 447
+AY + + A K ++A+L D
Sbjct: 651 NAYDLLTEMEAKKLGPDQYTYKVIIAALTD 680
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 84/214 (39%), Gaps = 39/214 (18%)
Query: 223 VYQVCLN---EKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVL 279
++ CL EKAF F +I + L K ++ +L G C + +++F+ L
Sbjct: 570 IHGFCLEGNVEKAFQFHNEMIEN--LFKPDVYTCNILLR---GLCREGMLEKALKLFNTL 624
Query: 280 GLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
V K + V YN +I +C+ F+ DLL EM P TY ++
Sbjct: 625 --------VSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIA 676
Query: 340 VLCKNGQDADACELLEEML--------------GRNC-------HPD--AITYEIFIVYS 376
L G+ +A E +M+ G+N H D +I Y I
Sbjct: 677 ALTDAGRIKEAEEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINEL 736
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
C K+ A + F ++ K G+ T+ ++G
Sbjct: 737 CNQHKYKDAMHLFVEVTKEGVALNKYTYLNLMEG 770
Score = 38.5 bits (88), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 67/163 (41%)
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
R +L + ++G P T ++N ++ C + DA + + +M C PD ++Y +
Sbjct: 198 RQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDA 257
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
+ A + M +GL P T+ + GY ++A K + + +
Sbjct: 258 LLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPT 317
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
Y++L + + A + EM K + P+V Y ++
Sbjct: 318 VWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLI 360
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 98/216 (45%), Gaps = 5/216 (2%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
+I+ F +G +A ++KK ++ + YN +I +C+ D+ E++
Sbjct: 194 TIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGK 253
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P TY+ ++ LC + Q +A L EM+ N PD +T+ I + C+ G A
Sbjct: 254 GVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEA 313
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
M+++G++P AT+ + + GY + + +A K + + Y++L +
Sbjct: 314 QGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILING 373
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ K A+ + EM GL PN Y ++ L
Sbjct: 374 YCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGL 409
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 57/117 (48%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YNILI C+ R+L EM G P T YN ++ LC+ G+ +A EL +
Sbjct: 364 VVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFK 423
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+M + C PD +T I + C++G D A F M L+P L T+ I+ +
Sbjct: 424 DMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMY 480
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 39/218 (17%)
Query: 291 KTERKVSYYNILIKEMCR--RCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
+ ER V ++NILI R R DF +L ++ ++G EP +T++ ++ LC + A
Sbjct: 114 RIERDVFHFNILINCFSRLQRVDF--AFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFA 171
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
A E +EM+ P+ TY I C++GK VA +M K G +P + + I
Sbjct: 172 RAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTII 231
Query: 409 KGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLR 468
G L D+ S A ++ SE+ G+R
Sbjct: 232 DG---------------LCKDRLVSE--------------------ALDIFSEIKGKGVR 256
Query: 469 PNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
P+V Y ++ L S Q+ A L + SL++ V
Sbjct: 257 PDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDV 294
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 70/172 (40%), Gaps = 15/172 (8%)
Query: 210 DYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGV 269
+Y T L+N + CL K F ++ +TK + VV + G C +
Sbjct: 328 NYATYNSLMNGY-----CLQNKVFE--ARMVFDAMITKGCMPNVVSYNILINGYCKAQRI 380
Query: 270 RALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEP 329
E+F + + +I T YN LI +C+ R+L +M+ GC P
Sbjct: 381 DEARELFDEMSF----RGLIPNTFN----YNTLISGLCQAGRHCEARELFKDMQAQGCSP 432
Query: 330 ITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
+T +L LCK G +A L M P+ +TY+I I + GK
Sbjct: 433 DLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGK 484
>gi|222619024|gb|EEE55156.1| hypothetical protein OsJ_02962 [Oryza sativa Japonica Group]
Length = 428
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 2/186 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ YN+L+K C D P D V + + +P +YN V+ LC+ G+ +A +L
Sbjct: 10 TATYNVLVKAHC--SDAAVPIDDAVRVFRNIPKPDACSYNTVIDGLCRRGRLPEARDLFA 67
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM+ P +TY I + R FD A F++M +RG+ P + T+++ I G
Sbjct: 68 EMIANGTAPTVVTYTTLIHWLAREACFDDALKLFDEMARRGIMPNVVTYSSLIDGLCKGG 127
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R A + + + K + + YS + K A +L M G +P+ ++
Sbjct: 128 RAASAVELLDRMVKERKLPNTITYSSVIDGLCKEGCLGQAMEILDRMRLQGRKPDAGLFG 187
Query: 476 RVLKHL 481
+++ L
Sbjct: 188 KLIVGL 193
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 84/199 (42%), Gaps = 7/199 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I +CRR RDL EM G P +TY ++ L + DA +L +EM
Sbjct: 46 YNTVIDGLCRRGRLPEARDLFAEMIANGTAPTVVTYTTLIHWLAREACFDDALKLFDEMA 105
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R P+ +TY I C+ G+ A ++MVK P T+++ I G
Sbjct: 106 RRGIMPNVVTYSSLIDGLCKGGRAASAVELLDRMVKERKLPNTITYSSVIDGLCKEGCLG 165
Query: 419 DAYKYV-VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
A + + + K + + L+ L D + A N L EM G+RPN R+
Sbjct: 166 QAMEILDRMRLQGRKPDAGLFGKLIVGLCDA-GRALEASNYLDEMNFAGIRPN-----RL 219
Query: 478 LKHLHTSHQEHMAKCLSSR 496
LH + + L S+
Sbjct: 220 TWSLHGRINDAVVTALCSK 238
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 72/170 (42%), Gaps = 4/170 (2%)
Query: 285 AKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKN 344
A+ + T V Y LI + R F L EM + G P +TY+ ++ LCK
Sbjct: 67 AEMIANGTAPTVVTYTTLIHWLAREACFDDALKLFDEMARRGIMPNVVTYSSLIDGLCKG 126
Query: 345 GQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
G+ A A ELL+ M+ P+ ITY I C+ G A ++M +G +P
Sbjct: 127 GRAASAVELLDRMVKERKLPNTITYSSVIDGLCKEGCLGQAMEILDRMRLQGRKPDAGLF 186
Query: 405 AAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM 454
I G R +A Y+ D+ + L SLH + N+ V+
Sbjct: 187 GKLIVGLCDAGRALEASNYL----DEMNFAGIRPNRLTWSLHGRINDAVV 232
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y L+ +C+ +LL M GCEP + Y+ ++ CK G+ A E+
Sbjct: 379 VVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFL 438
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M P TY I + G+ D+A +QM+K P + T+ A I G
Sbjct: 439 QMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIG 498
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A K + L +K S + + Y+ L K ++ ++ ++M + G PN YR
Sbjct: 499 ESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYR 558
Query: 476 RVLKHL 481
++ HL
Sbjct: 559 VLINHL 564
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 85/211 (40%), Gaps = 16/211 (7%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y ILI C+ + + L EMR VGC P +TY ++ K Q A ++
Sbjct: 258 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 317
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV----------------KRGLQP 399
M+ C P+ +TY + C+ G AF + +++ + L P
Sbjct: 318 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAP 377
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
+ T+ A + G ++ + A++ + ++++Y L K A+ V
Sbjct: 378 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 437
Query: 460 SEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
+M K G P+V Y ++ + + +A
Sbjct: 438 LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLA 468
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 83/199 (41%), Gaps = 28/199 (14%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQD----ADACE 352
S +N L+ C D+ LL M GC P + YN +G +C GQ+ D +
Sbjct: 113 SLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSIC--GQEKLPSPDLLD 170
Query: 353 LLE----EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT----- 403
L E EML NC + + F C VGKFD AF +M+++G P +T
Sbjct: 171 LAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVI 230
Query: 404 ----HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
HA ++ F+ ++ K V ++ D Y Y++L K A+ +
Sbjct: 231 TFLCHATKVEKAFLLFQ---EMKMVGVTPDVYT------YTILIDSFCKAGLIEQAQWLF 281
Query: 460 SEMMKNGLRPNVSVYRRVL 478
EM G P V Y ++
Sbjct: 282 EEMRSVGCSPTVVTYTALI 300
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 5/143 (3%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI+ F G + A+ V + + V Y LI M + +L +M +
Sbjct: 419 ALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD 478
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
C P +TY ++ LC+ G+ A +LL M + C P+ +TY I + GK D++
Sbjct: 479 SCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLS 538
Query: 386 FNFFNQMVKRGLQPRLATHAAFI 408
+ F QM ++G P T+ I
Sbjct: 539 LDLFTQMSRKGCSPNYVTYRVLI 561
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 68/153 (44%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P +TY ++ LCK + A ELL+ ML C P+ I Y+ I C+ GK D A
Sbjct: 377 PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 436
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
F QM K G P + T+ + I F R + A K + + + + Y+ + +
Sbjct: 437 FLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCR 496
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A +LS M + G PNV Y ++ L
Sbjct: 497 IGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 529
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 91/221 (41%), Gaps = 21/221 (9%)
Query: 279 LGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLT 333
+G ++ A +IK+ RK S Y+ +I +C + L EM+ VG P T
Sbjct: 201 VGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYT 260
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
Y ++ CK G A L EEM C P +TY I + + A + F++MV
Sbjct: 261 YTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMV 320
Query: 394 KRGLQPRLATHAAFIKGYF----IFYRYEDAYKYVVLS-----------ADKYKSSSNML 438
G +P T+ A + G I +E K + S D++ + N++
Sbjct: 321 DAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVV 380
Query: 439 -YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
Y L K + A +L M+ +G PN VY ++
Sbjct: 381 TYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALI 421
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 82/211 (38%), Gaps = 17/211 (8%)
Query: 306 MCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPD 365
+C F L+ EM + G P T TY+ V+ LC + A L +EM PD
Sbjct: 198 LCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 257
Query: 366 AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV 425
TY I I C+ G + A F +M G P + T+ A I Y + A
Sbjct: 258 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 317
Query: 426 LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM----------------KNGLRP 469
D +++ Y L K N A V ++++ ++ L P
Sbjct: 318 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAP 377
Query: 470 NVSVYRRVLKHLHTSHQ-EHMAKCLSSRYSS 499
NV Y ++ L +H+ +H + L + SS
Sbjct: 378 NVVTYGALVDGLCKAHKVDHAHELLDAMLSS 408
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 69/162 (42%), Gaps = 13/162 (8%)
Query: 270 RALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKG-------PRDLLVEM 322
R LI GL + A+ ++ E K +Y+ ++ RC +G +L EM
Sbjct: 558 RVLINHLCAAGLLDKARLLLG--EMKQTYWPKYLQGY--RCAIQGFSKSFIASLGILEEM 613
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG--RNCHPDAITYEIFIVYSCRVG 380
G PI Y ++ K G+ A EL +EM+ + D Y I C
Sbjct: 614 ESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLAS 673
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
+ + AF +++M +RG P L+ IKG ++++A +
Sbjct: 674 QVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQ 715
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 85/222 (38%), Gaps = 37/222 (16%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y +I +CR + + LL M + GC P +TY ++ L K G+ + +L
Sbjct: 484 VVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFT 543
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVA------------------------------ 385
+M + C P+ +TY + I + C G D A
Sbjct: 544 QMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSF 603
Query: 386 ---FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA---YKYVVLSADKYKSSSNMLY 439
+M G P + I + R E A +K ++ K+ ++M
Sbjct: 604 IASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYA 663
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
SL+ +L + A + SEM + G P +SV+ ++K L
Sbjct: 664 SLIQALCLASQVE-EAFRLYSEMTRRGFVPELSVFVCLIKGL 704
>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 597
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 98/217 (45%), Gaps = 20/217 (9%)
Query: 215 RQLLNDFNVYQVCLNEKAFGFLPVLIS----SKALTKKGIWRVVEVLNQVGGSCLVSGVR 270
+++LND ++Y + F PV+IS AL K R + + V G+
Sbjct: 225 QEMLNDSSLYGI-------NFKPVVISYSIIIDALCKD---RREDEARDLFEEMKVQGMT 274
Query: 271 ALIEMFSVLGLYEMAK-----YVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
+ ++ L ++E AK V + + V +N+LI +C+ +DLL M Q
Sbjct: 275 PTVISYTSL-MWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQR 333
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P LTYN ++ C G A EL M + C PD I Y + I C+ K + A
Sbjct: 334 GIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEA 393
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
+N M++ G +P + T+ A + G F + DA K
Sbjct: 394 MKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKK 430
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 97/206 (47%), Gaps = 14/206 (6%)
Query: 280 GLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
GL MA + + + Y LIK +C L M+++GC P +TY ++
Sbjct: 150 GLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMK 209
Query: 340 VLCKNGQDADACELLEEML------GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
LC+ G + A +L +EML G N P I+Y I I C+ + D A + F +M
Sbjct: 210 GLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMK 269
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPV 453
+G+ P + ++ + + +E+A + ++ + + +++L + K +
Sbjct: 270 VQGMTPTVISYTSLM--------WEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVI 321
Query: 454 MAKNVLSEMMKNGLRPNVSVYRRVLK 479
AK++L M++ G+ PN+ Y +++
Sbjct: 322 EAKDLLEVMIQRGIVPNLLTYNSLIE 347
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 89/195 (45%), Gaps = 8/195 (4%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+I+I +C+ RDL EM+ G P ++Y ++ +A L EM+
Sbjct: 245 YSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMW--------EEAKRLFNEMV 296
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+ +T+ + I C+ GK A + M++RG+ P L T+ + I+G+ +
Sbjct: 297 NQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLN 356
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + V K + Y++L + + K + A + + M++ G RP+V Y +L
Sbjct: 357 SARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALL 416
Query: 479 KHLHTSHQEHMAKCL 493
L + AK L
Sbjct: 417 TGLFQGGKVGDAKKL 431
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 2/115 (1%)
Query: 299 YNILIKEMCRR-CDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
Y I + +C+ C F+ +L +++ + +N ++ LCK G+ A EL E++
Sbjct: 447 YGIFLNGLCKNGCLFEA-MELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKL 505
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
PD +TY I I CR G+ A F +M K G P T+A I+G+F
Sbjct: 506 PQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFF 560
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 7/186 (3%)
Query: 231 KAFGFLPVLISSKALTKKGIWRVV-EVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVI 289
K G P +IS +L + R+ E++NQ G V LI++ G AK ++
Sbjct: 269 KVQGMTPTVISYTSLMWEEAKRLFNEMVNQ-GVQPNVVTFNVLIDVLCKEGKVIEAKDLL 327
Query: 290 KKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKN 344
+ ++ + YN LI+ C D R+L V M GCEP + Y ++ CK
Sbjct: 328 EVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKT 387
Query: 345 GQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
+ +A +L ML PD TY + + GK A F M G+ L +
Sbjct: 388 SKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIY 447
Query: 405 AAFIKG 410
F+ G
Sbjct: 448 GIFLNG 453
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 78/191 (40%), Gaps = 17/191 (8%)
Query: 206 GRLDDYETMRQLLND-FNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSC 264
G+ D +T LL F +V +K FG + V L GI+ + G C
Sbjct: 404 GKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIF--------LNGLC 455
Query: 265 LVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQ 324
+ +E+F+ L Y + + + +N LI +C+ + +L ++ Q
Sbjct: 456 KNGCLFEAMELFNKLKSYNI--------KLDIECFNCLIDGLCKAGKLETAWELFEKLPQ 507
Query: 325 VGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
+P +TYN ++ C+ GQ A L ++M C PD ITY I K +
Sbjct: 508 EELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEK 567
Query: 385 AFNFFNQMVKR 395
+ MV+R
Sbjct: 568 VVELLHMMVQR 578
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 94/239 (39%), Gaps = 5/239 (2%)
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVI-----KKTERKVSYYNILIKEMC 307
++EV+ Q G + +LIE F ++G A+ + K E V Y +LI C
Sbjct: 326 LLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYC 385
Query: 308 RRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAI 367
+ + L M QVG P TY +L L + G+ DA +L M D
Sbjct: 386 KTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLY 445
Query: 368 TYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLS 427
Y IF+ C+ G A FN++ ++ + I G + E A++
Sbjct: 446 IYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKL 505
Query: 428 ADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
+ + Y+++ + V A + +M KNG P+ Y +++ S +
Sbjct: 506 PQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKK 564
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 65/167 (38%), Gaps = 12/167 (7%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+MR G P T N +L LC + + ++ +L R PD +TY I C
Sbjct: 121 QMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEH 180
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS----- 435
+ A F +M K G P T+ +KG R + + L + SS
Sbjct: 181 RISKAALLFTRMQKLGCTPNAITYGTLMKG---LCRTGNISIALKLHQEMLNDSSLYGIN 237
Query: 436 ----NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ YS++ K+ A+++ EM G+ P V Y ++
Sbjct: 238 FKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLM 284
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +N L+ C+ D R+LL M + GC P +TY+ ++ LC+ G LLE
Sbjct: 228 VVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLE 287
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+M+ R C PD +TY + + C+ GK A +M++ G P T++ G
Sbjct: 288 KMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDG 342
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 88/224 (39%), Gaps = 37/224 (16%)
Query: 292 TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQ-VGCEPITLTYNYVLGVLCKNGQDADA 350
T YN +I C+ + L EM+Q GC P T TY+ ++ LCK+ A
Sbjct: 152 TTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKA 211
Query: 351 CELLEEMLGR------------------------------------NCHPDAITYEIFIV 374
ELL+EM+GR C PD +TY I
Sbjct: 212 DELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIID 271
Query: 375 YSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSS 434
CR G D F +MV RG +P + T+ + G + +A + V + +
Sbjct: 272 GLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTP 331
Query: 435 SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ + YSL+ K + MA ++L+ + G +V + +L
Sbjct: 332 NAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALL 375
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEM-RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
Y +L++ C + + DLL EM +Q G P YN+ + LCK+G+ +A E+++ M
Sbjct: 21 YFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNM 80
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
C PD +T+ I C+ G+ D A ++M + G L T+ I G
Sbjct: 81 KDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLING 133
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 90/219 (41%), Gaps = 34/219 (15%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
S YN + +C+ +++ M+ C+P +T+N ++ LCK G+ +A ++L+E
Sbjct: 55 SMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDE 114
Query: 357 --------------------------------MLGRNCHPDAITYEIFIVYSCRVGKFDV 384
M G PD TY I C+ G+ D
Sbjct: 115 MERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDR 174
Query: 385 AFNFFNQMVKR-GLQPRLATHAAFIKGYFIFYRYEDAYKYVV-LSADKYKSSSNMLYSLL 442
A+ F +M +R G P T++ I G A + + + K +S + ++ L
Sbjct: 175 AYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTL 234
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ K + A+ +LS M+++G P+V Y ++ L
Sbjct: 235 VDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGL 273
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 158/380 (41%), Gaps = 38/380 (10%)
Query: 117 ISSFAMVNGPYATPKQVSEIIELLRSGDSETESKLLSMSVSLSNASVIEIL-----RVLN 171
+ S+ + Y ++ ++++L++ E +L + +L S I +L +V+
Sbjct: 145 VVSYTTIIDGYCHVGELQKVVQLVK------EMQLKGLKPNLYTYSSIILLLCKSGKVVE 198
Query: 172 SEKVSALCFLKYMREIMPE-FYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNE 230
EKV +RE+M + + I + +ID +L + + +L ++ ++ +
Sbjct: 199 GEKV--------LREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDS 250
Query: 231 KAFGFLPVLISSKA-----------LTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVL 279
AF L +S + KKG ++V + L+ G L EM
Sbjct: 251 IAFSALICGLSGSGKVVEADKLFNEMIKKGFEP-----DEVTYTALIDGYCKLGEMKKAF 305
Query: 280 GLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
L+ + V V Y L +C+ + +LL EM + G + TYN ++
Sbjct: 306 FLHN--QMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVN 363
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
LCK G A +L+EEM HPD ITY + + G+ A +M+ RGLQP
Sbjct: 364 GLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQP 423
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
+ T + G + + ED + + +K + Y+ + + NN ++ +
Sbjct: 424 TVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIY 483
Query: 460 SEMMKNGLRPNVSVYRRVLK 479
M G+ P+ + Y ++K
Sbjct: 484 RGMCAQGVVPDSNTYNILIK 503
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 77/180 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNIL+ + R + LL+ M GC P ++Y ++ C G+ +L++EM
Sbjct: 113 YNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQ 172
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+ TY I+ C+ GK +M+KRG+ P + I G+ +
Sbjct: 173 LKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQ 232
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
AYK + ++ +S L + V A + +EM+K G P+ Y ++
Sbjct: 233 AAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALI 292
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 51/117 (43%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +N+L+ +C + LL M + G P TYN ++ C + E+
Sbjct: 425 VVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYR 484
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
M + PD+ TY I I C+ A+ +MV++ +++ A IKG+F
Sbjct: 485 GMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFF 541
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 63/158 (39%), Gaps = 35/158 (22%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
E Q+G T +YN ++ L + G+ +A LL M + C PD ++Y I C VG
Sbjct: 100 EFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVG 159
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+ +M +GL+P L T+++ I
Sbjct: 160 ELQKVVQLVKEMQLKGLKPNLYTYSSII-------------------------------- 187
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
L K+ V + VL EMMK G+ P+ +Y ++
Sbjct: 188 ---LLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLI 222
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 106/242 (43%), Gaps = 5/242 (2%)
Query: 272 LIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI F LGL A V+ K E N IK C + + ++ +G
Sbjct: 111 LINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALG 170
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
++Y ++ LCK G+ A ELL + G+ D + Y I C+ + AF
Sbjct: 171 FHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAF 230
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
+ +++MV R + + T++A I G+ I + +DA + + +++L
Sbjct: 231 DLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAF 290
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
K AKN L+ MMK G++P++ Y ++ ++ +MAK + + S + ++V
Sbjct: 291 CKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATV 350
Query: 507 EA 508
+
Sbjct: 351 RS 352
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 7/221 (3%)
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMC 307
++ ++ G + V +I F + + + A + K+ K V YN LI +C
Sbjct: 337 ILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLC 396
Query: 308 RRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAI 367
+ +L+ M G +P +TY+ +L LCKN A LL ++ + P+
Sbjct: 397 KSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMY 456
Query: 368 TYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLS 427
TY I I C+ G+ + A N F ++ +G + T+ I+G+ +++A +
Sbjct: 457 TYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKM 516
Query: 428 ADKYKSSSNMLYS-LLASLHDKNNNPVMAKNVLSEMMKNGL 467
D + Y ++ SL DK+ N A+ +L EM+ GL
Sbjct: 517 KDNSCIPDAITYEIIICSLFDKDEND-KAEKLLREMITRGL 556
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 100/225 (44%), Gaps = 2/225 (0%)
Query: 257 LNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPR 316
L+QV L++G+ + E + L L + + K + V Y+ +I MC+ +
Sbjct: 173 LDQVSYGTLINGLCKVGETRAALEL--LRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAF 230
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
DL EM +TY+ ++ C G+ DA L +M N +PD T+ I +
Sbjct: 231 DLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAF 290
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
C+ G+ A N M+K+G++P + T+ + + GY + A + + + +++
Sbjct: 291 CKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATV 350
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y+++ + K A + EM + PNV Y ++ L
Sbjct: 351 RSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGL 395
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 97/224 (43%), Gaps = 2/224 (0%)
Query: 258 NQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRD 317
N V S L+SG + ++ +GL+ K + V +NIL+ C+ K ++
Sbjct: 244 NIVTYSALISGFCIVGKLKDAIGLFN--KMTSENINPDVYTFNILVDAFCKEGRVKEAKN 301
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L M + G +P +TYN ++ C + A +L M R +Y I I C
Sbjct: 302 GLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFC 361
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
++ D A F +M + + P + T+ + I G R A + + L D+ + +
Sbjct: 362 KIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDII 421
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
YS + KN+ A +L ++ G+RPN+ Y ++ L
Sbjct: 422 TYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGL 465
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 82/200 (41%), Gaps = 3/200 (1%)
Query: 280 GLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
GL M K IK + YN L+ C + + +L M G +YN V+
Sbjct: 302 GLAMMMKQGIKP---DIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVIN 358
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
CK A +L +EM + P+ ITY I C+ G+ A + M RG QP
Sbjct: 359 GFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQP 418
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
+ T+++ + + + A ++ D+ + Y++L K A+N+
Sbjct: 419 DIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIF 478
Query: 460 SEMMKNGLRPNVSVYRRVLK 479
+++ G V+ Y +++
Sbjct: 479 EDLLVKGYNLTVNTYTVMIQ 498
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 66/161 (40%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L +M G +P + +N ++ C+ G A +L ++L PD IT FI C
Sbjct: 92 LFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFC 151
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
G+ A NF +++V G ++ I G A + + K +
Sbjct: 152 LKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVV 211
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+YS + K+ N A ++ SEM+ + N+ Y ++
Sbjct: 212 MYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALI 252
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P + + +LG L K+ L ++M R P+ + + I I C++G AF+
Sbjct: 68 PPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSV 127
Query: 389 FNQMVKRGLQPRLATHAAFIKGY 411
+++K G +P T FIKG+
Sbjct: 128 LAKILKMGYEPDTITLNTFIKGF 150
>gi|255660954|gb|ACU25646.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 375
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 104/236 (44%), Gaps = 7/236 (2%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEM 306
V+E+ Q GG A+I + A YV+ + V YN LI +
Sbjct: 115 HVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSGCKPNVHVYNTLINGL 174
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
F+ + EM + C P +TYN ++ LCK +A L++E+L + P
Sbjct: 175 VGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKKEMFGEAYNLVKELLDKGLDPGV 234
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
ITY + + C K + A +NQ+ +G +P + H I G + + A +
Sbjct: 235 ITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALS-LYF 293
Query: 427 SADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+++K + N++ ++ L K+ + A + + +++NGL P++ Y LK L
Sbjct: 294 DMNRWKYAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGL 349
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 96/226 (42%)
Query: 282 YEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+E+ + + + R VS +NI+++ + + M++ G ++TY ++
Sbjct: 45 FELWEMMGSEGNRSVSSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGF 104
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
CKNG + +LE + DA Y I C+ D A N M+K G +P +
Sbjct: 105 CKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRALYVLNGMIKSGCKPNV 164
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
+ I G ++EDA + + S + + Y+ L + K A N++ E
Sbjct: 165 HVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKKEMFGEAYNLVKE 224
Query: 462 MMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSVE 507
++ GL P V Y ++K L H+ A L ++ +S V+
Sbjct: 225 LLDKGLDPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQ 270
>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 840
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 104/243 (42%), Gaps = 15/243 (6%)
Query: 243 KALTKKGIWRVVEVLNQVG-GSCL---VSGVRALIEMFSVLGLYEMAKYVIKKTERKVSY 298
K L +KGI + N + G C+ +S R L++ + GL E
Sbjct: 550 KQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGL-----------EPNAVT 598
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ C + + +LL EM+ P +TY V+ LCK + ++C+LLE+M
Sbjct: 599 YTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMD 658
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD ++Y I C+ AF +++M+ L+P T+ I G+ ++ +
Sbjct: 659 AVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLK 718
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA +V ++ + + Y+ + H + A +M++ G ++ Y V+
Sbjct: 719 DADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVI 778
Query: 479 KHL 481
L
Sbjct: 779 GRL 781
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 2/193 (1%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K+ + V +N ++ C+ + M + G P +YN ++ LC G +
Sbjct: 275 KEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGE 334
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A +L +M PD +TY I +G + A+N +M+ +G P L T+ I
Sbjct: 335 ALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLIC 394
Query: 410 GYFIFYRYEDAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLR 468
G+ E+A K Y + + ++ S LL SL K+ +A + EM NGLR
Sbjct: 395 GHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLC-KSRQVDVAFKLFCEMEANGLR 453
Query: 469 PNVSVYRRVLKHL 481
P++ Y ++ L
Sbjct: 454 PDLITYSTLIHGL 466
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 86/212 (40%), Gaps = 5/212 (2%)
Query: 272 LIEMFSVLGLYEMA-----KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
L + F +LGL A K +IK + Y +LI C+ + + L EM G
Sbjct: 357 LAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHG 416
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
+ ++ +LG LCK+ Q A +L EM PD ITY I C+ G+ A
Sbjct: 417 FQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAI 476
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
+ +M + P H A + G + A Y S +LY+++ +
Sbjct: 477 LLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGY 536
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
K N A + ++ + G+ P + + ++
Sbjct: 537 IKRGNTREAVKLYKQLGEKGISPTIVTFNSLM 568
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 80/191 (41%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
+I++ +CR+ F+ + +P +++N ++ CK G A ML
Sbjct: 250 SIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLK 309
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
PDA +Y I I C G A + N M GL+P + T+ KG+ +
Sbjct: 310 HGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLING 369
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
A+ + K + + + Y++L H + N A + EM+ +G + ++ +L
Sbjct: 370 AWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLG 429
Query: 480 HLHTSHQEHMA 490
L S Q +A
Sbjct: 430 SLCKSRQVDVA 440
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 87/217 (40%), Gaps = 8/217 (3%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
G C + V ++++ + + +I T +L+ +C+ L E
Sbjct: 395 GHCQIGNVEEALKLYKEMISHGFQLSIISST--------VLLGSLCKSRQVDVAFKLFCE 446
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M G P +TY+ ++ LCK G+ A L E+M P+++ + ++ C GK
Sbjct: 447 MEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGK 506
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
A +F+ ++ L + + I GY +A K +K S + + ++
Sbjct: 507 ISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNS 566
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
L N A+ +L + +GL PN Y ++
Sbjct: 567 LMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLM 603
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 50/112 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNI+I +R + + L ++ + G P +T+N ++ C N + + A LL+ +
Sbjct: 529 YNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIK 588
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
P+A+TY + C G ++M + + P T+ IKG
Sbjct: 589 LHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKG 640
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 67/158 (42%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
D+ E++ G T + V+ LC+ + DA ++ G+ P +++ +
Sbjct: 232 DVYNEIKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRY 291
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
C++G DVA +FF M+K GL P ++ I G I +A +
Sbjct: 292 CKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDM 351
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ Y++LA A N++ +M+ G PN+ Y
Sbjct: 352 VTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTY 389
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 75.1 bits (183), Expect = 9e-11, Method: Composition-based stats.
Identities = 48/190 (25%), Positives = 89/190 (46%), Gaps = 14/190 (7%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ +C C++K LL +M P + ++ V+ LCK G+ +A E+++ M+
Sbjct: 243 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 302
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R PD +TY + C + D A F+ MV++G P + ++ I GY ++ +
Sbjct: 303 QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKID 362
Query: 419 DA-YKYVVLSADKY----KSSSNMLYSL--LASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
A Y + + ++ K+ + ++Y L + L D A + EM+ G P++
Sbjct: 363 KAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQD-------AIALFHEMVARGQMPDL 415
Query: 472 SVYRRVLKHL 481
Y +L L
Sbjct: 416 VTYSILLDSL 425
Score = 69.3 bits (168), Expect = 4e-09, Method: Composition-based stats.
Identities = 57/221 (25%), Positives = 95/221 (42%), Gaps = 5/221 (2%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEM 306
+V +++ + G + V LI + + + A Y+ ++ RK YN L+ +
Sbjct: 331 KVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGL 390
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
C + L EM G P +TY+ +L LCKN +A LL+ + N +PD
Sbjct: 391 CHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDI 450
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
Y I I CR G+ + A + F+ + +GL P + T+ I G +A K +
Sbjct: 451 QVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFME 510
Query: 427 SADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
S Y+ +A +NN + A +L EM+ G
Sbjct: 511 MDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGF 551
Score = 68.2 bits (165), Expect = 9e-09, Method: Composition-based stats.
Identities = 42/180 (23%), Positives = 77/180 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ LI+ +C L +M G +P +TY ++ LCK G + A LL M
Sbjct: 138 FTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSME 197
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
NC PD + Y I C+ + AFN F+QMV +G+ P + T+ + + ++
Sbjct: 198 QGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWK 257
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ + +++S + K A ++ M++ G+ P+V Y ++
Sbjct: 258 HVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLM 317
Score = 65.5 bits (158), Expect = 6e-08, Method: Composition-based stats.
Identities = 48/211 (22%), Positives = 92/211 (43%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V ++ ++ +C+ +++ M Q G EP +TY ++ C + +A ++ +
Sbjct: 275 VVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFD 334
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+ + PD I+Y I C++ K D A F +M ++ P T+ + G
Sbjct: 335 MMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVG 394
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R +DA + + + YS+L KN + A +L + + L P++ VY
Sbjct: 395 RLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYN 454
Query: 476 RVLKHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
++ + + + A+ L S SS L SV
Sbjct: 455 IIIDGMCRAGELEAARDLFSNLSSKGLHPSV 485
Score = 64.3 bits (155), Expect = 1e-07, Method: Composition-based stats.
Identities = 44/199 (22%), Positives = 82/199 (41%)
Query: 280 GLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
L+ K + + + V Y LI +C+ + LL M Q C+P + Y ++
Sbjct: 154 ALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIID 213
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
LCK+ Q +A L +M+G+ PD TY + C + ++ NQMV + P
Sbjct: 214 SLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILP 273
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
+ + + + +A++ V + + + Y+ L H + A V
Sbjct: 274 DVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVF 333
Query: 460 SEMMKNGLRPNVSVYRRVL 478
M++ G P+V Y ++
Sbjct: 334 DMMVRKGFAPDVISYTTLI 352
Score = 60.5 bits (145), Expect = 2e-06, Method: Composition-based stats.
Identities = 65/278 (23%), Positives = 117/278 (42%), Gaps = 26/278 (9%)
Query: 215 RQLLNDFNVYQVCLNEKAFGFLPVLISSK----ALTKKGIWR-VVEVLNQVGGSCLV--- 266
RQ+ FN++ + + G P + + AL W+ V +LNQ+ S ++
Sbjct: 219 RQVTEAFNLFSQMVGQ---GISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDV 275
Query: 267 ----SGVRALIEMFSVLGLYEMAKYVIKK-TERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
+ V AL + V +E+ +I++ E V Y L+ C + + +
Sbjct: 276 VIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDM 335
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M + G P ++Y ++ CK + A L EEM + PD TY + C VG+
Sbjct: 336 MVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGR 395
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM---- 437
A F++MV RG P L T++ + E+A ++ K +SN+
Sbjct: 396 LQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEA-----MALLKAIEASNLNPDI 450
Query: 438 -LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+Y+++ + A+++ S + GL P+V Y
Sbjct: 451 QVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTY 488
Score = 53.5 bits (127), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 66/164 (40%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L +M G P T N ++ C + A +L ++L PD T+ I C
Sbjct: 87 LSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLC 146
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
GK A + F++M+ G QP + T+ I G A + + +
Sbjct: 147 VEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVV 206
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+Y+ + K+ A N+ S+M+ G+ P++ Y ++ L
Sbjct: 207 IYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHAL 250
Score = 48.1 bits (113), Expect = 0.010, Method: Composition-based stats.
Identities = 43/164 (26%), Positives = 67/164 (40%), Gaps = 21/164 (12%)
Query: 206 GRLDDYETMRQLLNDFNVYQVCLN---EKAFGFLPVLISSKALTKKGIWRVVEVLNQVGG 262
G++ D T LL+ +C N E+A L + +S ++ ++ + G
Sbjct: 410 GQMPDLVTYSILLD-----SLCKNRHLEEAMALLKAIEASNLNPDIQVYNII-----IDG 459
Query: 263 SCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
C + A ++FS L K V YNI+I +C+R L +EM
Sbjct: 460 MCRAGELEAARDLFSNLS--------SKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEM 511
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
C P TYN + +N + A +LLEEML R D+
Sbjct: 512 DGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADS 555
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 83/176 (47%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+L+ + + +F ++L+ +M +G + TYN ++ CK +A +L EML
Sbjct: 245 YNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREML 304
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
GR P +TY + CR+G+ A + + MV L P L ++ I GY +
Sbjct: 305 GRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFA 364
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+A K S + Y+ L + N +AK + +M+K+GL P+V +
Sbjct: 365 EALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTF 420
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 73/154 (47%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
EM+ G P +TYN ++ LCK G DA EL+++M PD +TY I G
Sbjct: 477 EMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISG 536
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
A F+ M+K+G+ P + T+ I Y + R + A KY DK S + + Y+
Sbjct: 537 LLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYN 596
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
L K N +A N+ +EM G+ PN Y
Sbjct: 597 ALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTY 630
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 94/192 (48%), Gaps = 8/192 (4%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+LI +C+ +F +L+ +MR G P +TY ++ +G A E+ +ML
Sbjct: 490 YNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDML 549
Query: 359 GRNCHPDAITYEIFI-VYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
+ HP +TY + I Y+ R G+ D A +F++M +G+ P + T+ A I G
Sbjct: 550 KKGIHPSVVTYTVLIHSYAVR-GRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMM 608
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL---SEMMKNGLRPNVSVY 474
+ AY K S + Y++L ++N+N ++ L +M+ ++P+ +
Sbjct: 609 DVAYNLFAEMESKGVSPNKYTYTILI---NENSNLQYWQDALKLYKDMLDREIKPDSCTH 665
Query: 475 RRVLKHLHTSHQ 486
++KHL ++
Sbjct: 666 SALMKHLSKDYK 677
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 82/185 (44%), Gaps = 1/185 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI CR + + + +M + G P +T+ ++ C+ G A EL +
Sbjct: 382 VVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFD 441
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EML R PD I Y IV ++G AF +M G P L T+ I G
Sbjct: 442 EMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLG 501
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
++DA + V + ++ Y+ + H + A+ V S+M+K G+ P+V Y
Sbjct: 502 NFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTY- 560
Query: 476 RVLKH 480
VL H
Sbjct: 561 TVLIH 565
>gi|356574876|ref|XP_003555569.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08610-like [Glycine max]
Length = 589
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 83/181 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNIL+ +C+ M C P +TYN +L LCK G + +LL ++
Sbjct: 378 YNILLNGLCKSGLLDRAISFYSTMVTENCSPDIITYNTLLSGLCKEGFIDEGIQLLNLLV 437
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
G +C P +TY I I R+G + A +++MV +G+ P TH++ G+ + E
Sbjct: 438 GTSCSPGLVTYNIVIDGLARLGSMESAKELYDEMVDKGIIPDEITHSSLTWGFCRADQLE 497
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + + + K + N Y + + +A VL M+K P+ +Y ++
Sbjct: 498 EATELLKEMSMKEQRIKNTAYRCVILGLCRQKKVDIAIQVLDLMVKGQCNPDERIYSALI 557
Query: 479 K 479
K
Sbjct: 558 K 558
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 85/183 (46%), Gaps = 15/183 (8%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
L+ E C+ L +M G P T+TYN V+G LCKNG+ A +L+E+M
Sbjct: 180 LVDEACKT---------LNKMVMSGGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSLSG 230
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
C PDAITY I G F+ A NF+ +++G P L T+ I+ + +Y A
Sbjct: 231 CSPDAITYNSIIRCLFDKGNFNQAVNFWRDQLRKGCPPYLITYTVLIE---LVCKYCGAA 287
Query: 422 KYVVLSADKYKSS---SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ + + D + Y+ L +L K V+ ++ +G++PN Y ++
Sbjct: 288 RALEVLEDMAMEGCYPDIVTYNSLVNLTSKQGKYEDTALVILNLLSHGMQPNAVTYNTLI 347
Query: 479 KHL 481
L
Sbjct: 348 HSL 350
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 88/238 (36%), Gaps = 8/238 (3%)
Query: 249 GIWRVVEVLNQVGGSCLVSGV---RALIEMFSVLGLYEMAKYVI-----KKTERKVSYYN 300
G R +EVL + + +L+ + S G YE VI + YN
Sbjct: 285 GAARALEVLEDMAMEGCYPDIVTYNSLVNLTSKQGKYEDTALVILNLLSHGMQPNAVTYN 344
Query: 301 ILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGR 360
LI + + D+L M + P +TYN +L LCK+G A M+
Sbjct: 345 TLIHSLINHGYWDEVDDILKIMNETSSPPTHVTYNILLNGLCKSGLLDRAISFYSTMVTE 404
Query: 361 NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
NC PD ITY + C+ G D N +V P L T+ I G E A
Sbjct: 405 NCSPDIITYNTLLSGLCKEGFIDEGIQLLNLLVGTSCSPGLVTYNIVIDGLARLGSMESA 464
Query: 421 YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ DK + +S L + + A +L EM R + YR V+
Sbjct: 465 KELYDEMVDKGIIPDEITHSSLTWGFCRADQLEEATELLKEMSMKEQRIKNTAYRCVI 522
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 99/223 (44%), Gaps = 10/223 (4%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+GG C +R+ +++ + L + I YN +I+ + + +F +
Sbjct: 207 IGGLCKNGRLRSALDLVEDMSLSGCSPDAIT--------YNSIIRCLFDKGNFNQAVNFW 258
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
+ + GC P +TY ++ ++CK A A E+LE+M C+PD +TY + + +
Sbjct: 259 RDQLRKGCPPYLITYTVLIELVCKYCGAARALEVLEDMAMEGCYPDIVTYNSLVNLTSKQ 318
Query: 380 GKF-DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML 438
GK+ D A N ++ G+QP T+ I +++ + + + +++
Sbjct: 319 GKYEDTALVILN-LLSHGMQPNAVTYNTLIHSLINHGYWDEVDDILKIMNETSSPPTHVT 377
Query: 439 YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y++L + K+ A + S M+ P++ Y +L L
Sbjct: 378 YNILLNGLCKSGLLDRAISFYSTMVTENCSPDIITYNTLLSGL 420
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 61/154 (39%), Gaps = 5/154 (3%)
Query: 272 LIEMFSVLGLYEMA-----KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI F GL + A K V+ YN++I +C+ + DL+ +M G
Sbjct: 171 LIRGFIRKGLVDEACKTLNKMVMSGGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSLSG 230
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
C P +TYN ++ L G A + L + C P ITY + I C+ A
Sbjct: 231 CSPDAITYNSIIRCLFDKGNFNQAVNFWRDQLRKGCPPYLITYTVLIELVCKYCGAARAL 290
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
M G P + T+ + + +YED
Sbjct: 291 EVLEDMAMEGCYPDIVTYNSLVNLTSKQGKYEDT 324
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 57/140 (40%), Gaps = 1/140 (0%)
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N + G + + G +AC+ L +M+ PD ITY + I C+ G+ A + M
Sbjct: 170 NLIRGFI-RKGLVDEACKTLNKMVMSGGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSL 228
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM 454
G P T+ + I+ F + A + K + Y++L L K
Sbjct: 229 SGCSPDAITYNSIIRCLFDKGNFNQAVNFWRDQLRKGCPPYLITYTVLIELVCKYCGAAR 288
Query: 455 AKNVLSEMMKNGLRPNVSVY 474
A VL +M G P++ Y
Sbjct: 289 ALEVLEDMAMEGCYPDIVTY 308
>gi|357486821|ref|XP_003613698.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515033|gb|AES96656.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 749
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 88/183 (48%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+LI C+R + KG +++L EM++VG P L+ +L C+ +A +L +M
Sbjct: 157 YNMLIDGFCKRGEVKGAQEMLDEMKRVGIVPCVLSTTSILYGCCQANNVDEAHKLFNDMK 216
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD I+ + + C++G+ + A +F + G ++++ I +F RY
Sbjct: 217 ETSYPPDMISCNVVLNGFCKMGRLEEALSFVWMIKNDGFSLNRNSYSSLINAFFKARRYR 276
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A+ + + +LY+++ K A +L EM + GL P+ Y V+
Sbjct: 277 EAHAWYTKMFKQGIVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIGLTPDAYCYNAVI 336
Query: 479 KHL 481
+ L
Sbjct: 337 QGL 339
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 117/292 (40%), Gaps = 88/292 (30%)
Query: 240 ISSKALTKKG----IWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYV-IKKTER 294
I + L+K+G +++E + Q+G + A+I+ +GL A+ + ++ +E
Sbjct: 299 IMIRGLSKEGRVGEAAKMLEEMTQIGLTPDAYCYNAVIQGLCDVGLLNRAQSLRLEISEH 358
Query: 295 KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK----------- 343
V + ILI EMC+R ++L +M ++GCEP +T+N ++ LCK
Sbjct: 359 NVCTHTILICEMCKRGMVAEAQELFNQMEKLGCEPSVVTFNTLINGLCKANNLEKAKNLF 418
Query: 344 ------------------NGQDADACELLE---EM---------------LGRNCHPDAI 367
+GQ +D+ LL+ EM L PD I
Sbjct: 419 CKLEVGRRHSLHLSLSQGSGQVSDSARLLKKAKEMCEAGQILRAYKLITDLAGEVKPDII 478
Query: 368 TYEIFIVYSCRVGKFDVAFNFFNQMVKRGL-QPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
TY I + C + + A+NFF + K+G P T+ IKG F+ R ++A+K
Sbjct: 479 TYNILLNALCMDREVNAAYNFFEFLQKKGYPSPDNVTYGTIIKGLFMVDREDEAFK---- 534
Query: 427 SADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
V M K G P +SVYR ++
Sbjct: 535 -------------------------------VFQRMQKTGSEPTLSVYRTLM 555
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 98/236 (41%), Gaps = 5/236 (2%)
Query: 251 WRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKK-----TERKVSYYNILIKE 305
W +E+L + G VRAL+ +S +G E A + E YN ++++
Sbjct: 69 WEALELLKKNGVLVTSDSVRALVRSYSHMGYTEKAIESFSRMREFGIEPDAHMYNTILRD 128
Query: 306 MCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPD 365
+ + L M + EP TYN ++ CK G+ A E+L+EM P
Sbjct: 129 VLNEKLLELALALYTTMLKSNVEPNFYTYNMLIDGFCKRGEVKGAQEMLDEMKRVGIVPC 188
Query: 366 AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV 425
++ + C+ D A FN M + P + + + G+ R E+A +V
Sbjct: 189 VLSTTSILYGCCQANNVDEAHKLFNDMKETSYPPDMISCNVVLNGFCKMGRLEEALSFVW 248
Query: 426 LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + S + YS L + K A ++M K G+ P+V +Y +++ L
Sbjct: 249 MIKNDGFSLNRNSYSSLINAFFKARRYREAHAWYTKMFKQGIVPDVVLYAIMIRGL 304
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 48/115 (41%), Gaps = 4/115 (3%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y I+I+ + + +L EM Q+G P YN V+ LC G A L
Sbjct: 294 VVLYAIMIRGLSKEGRVGEAAKMLEEMTQIGLTPDAYCYNAVIQGLCDVGLLNRAQSLRL 353
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
E+ N T+ I I C+ G A FNQM K G +P + T I G
Sbjct: 354 EISEHN----VCTHTILICEMCKRGMVAEAQELFNQMEKLGCEPSVVTFNTLING 404
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 52/96 (54%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
+L M GC P +TYN +L LCK + +A EL +M+ R C PD +TY +
Sbjct: 573 ELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGF 632
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
C VGK + A F++MV +G P + + +KG+F
Sbjct: 633 CNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFF 668
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 82/198 (41%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ILI C+ + L +M + C P TYN L L + G+ ADA + E
Sbjct: 482 VVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYE 541
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM+ C PD ITY I K D A F M+ RG +P T+ + G
Sbjct: 542 EMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKES 601
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ ++A++ ++ + Y+ L A V EM+ G P+V Y
Sbjct: 602 KPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYN 661
Query: 476 RVLKHLHTSHQEHMAKCL 493
+LK + + AK L
Sbjct: 662 CLLKGFFRAGKPGEAKQL 679
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 74/176 (42%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V+ YN + + R+ + + EM GC P +TY+ ++ + A EL E
Sbjct: 517 VTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFE 576
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+ R C P+A+TY + C+ K D A F +MV+RG P T+ + G+
Sbjct: 577 TMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVG 636
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
+ E A + K + Y+ L + P AK + M+ +P+
Sbjct: 637 KIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDT 692
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 55/122 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ +C+ +L +M + GC+P +TY +L C G+ A E+ +EM+
Sbjct: 590 YNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMV 649
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD + Y + R GK A F MV R +P +H I G R +
Sbjct: 650 SKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLD 709
Query: 419 DA 420
DA
Sbjct: 710 DA 711
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 70/150 (46%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P ++Y+ ++ CK + A +L ++M+ NC P+ TY F+ R G+ A
Sbjct: 480 PDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGV 539
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
+ +MV G P + T++ I G+ + +++ A++ + + + Y+ L K
Sbjct: 540 YEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCK 599
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ P A + +M++ G P+ Y +L
Sbjct: 600 ESKPDEAHELFRKMVERGCDPDRVTYTTLL 629
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 2/139 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ C + ++ EM G +P + YN +L + G+ +A +L + M+
Sbjct: 625 YTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMV 684
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK-RGLQPRLATHAAFIKGYFIFYRY 417
R C PD +++ I I + + D A F +M + G P L T+ + I G R
Sbjct: 685 SRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRL 744
Query: 418 EDAYKYVVLSADKYKSSSN 436
+A K V D+ K S +
Sbjct: 745 SEAMK-VFKEIDRLKLSPD 762
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%)
Query: 333 TYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
Y+ ++ +L ++G+ A E E+ GRN P + T I C+ G+ D A + M
Sbjct: 341 VYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETM 400
Query: 393 VKRGLQPRLATHAAFI 408
+KRG P +ATH+ I
Sbjct: 401 IKRGYCPDMATHSMLI 416
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 64/151 (42%), Gaps = 1/151 (0%)
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN 390
TYN +L L ++ A ++ E+M+ + P+ TY + + SC D A FF
Sbjct: 129 VFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFG 188
Query: 391 QMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNN 450
+MV +G +P + + + + + +K + ML L +
Sbjct: 189 EMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQD 248
Query: 451 NPVMAKNVLSEMMKNGLRPNVSVYR-RVLKH 480
+ A + M+K+G +P+ ++Y VL H
Sbjct: 249 KAIEASKLFRAMVKSGCKPDATIYSYMVLAH 279
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 57/139 (41%), Gaps = 9/139 (6%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
G C V + +E+F + V K + V YN L+K R + L
Sbjct: 631 GFCNVGKIEQAVEVFDEM--------VSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQV 682
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM-LGRNCHPDAITYEIFIVYSCRVG 380
M C+P T+++N ++ L K + DA E+ E M C PD +TY I C
Sbjct: 683 MVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQ 742
Query: 381 KFDVAFNFFNQMVKRGLQP 399
+ A F ++ + L P
Sbjct: 743 RLSEAMKVFKEIDRLKLSP 761
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 69/168 (41%), Gaps = 14/168 (8%)
Query: 228 LNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKY 287
L+E FL + + SKA LN V + +SG L + + +E +
Sbjct: 285 LDEAFKLFLEMAVESKA-----------PLNNVAWTAFLSG---LCKSGKIEQAFEACRT 330
Query: 288 VIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQD 347
+ + Y++LI+ + + +E+ +P + T + V+ LCK G+
Sbjct: 331 MQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRV 390
Query: 348 ADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR 395
A LLE M+ R PD T+ + I C+ K A F M ++
Sbjct: 391 DSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRK 438
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 56/134 (41%), Gaps = 2/134 (1%)
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP-RLATHAAF 407
+A +L M+ C PDA Y ++ C++ D AF F +M P AF
Sbjct: 252 EASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAF 311
Query: 408 IKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
+ G + E A++ + + SSS +Y +L L ++ A+ E+ +
Sbjct: 312 LSGLCKSGKIEQAFE-ACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNI 370
Query: 468 RPNVSVYRRVLKHL 481
+P+ V++ L
Sbjct: 371 QPSSGTCHSVIQEL 384
>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Glycine max]
Length = 1078
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 91/201 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V+ +NIL+ +C R FK LL +M + G P +TYN +L CK G+ A +L++
Sbjct: 175 VATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLID 234
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M + D TY +FI CR + + +M + + P T+ I G+
Sbjct: 235 CMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREG 294
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ E A K + +++ Y+ L + H N A ++ M+ +GLRPN Y
Sbjct: 295 KIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYG 354
Query: 476 RVLKHLHTSHQEHMAKCLSSR 496
+L L+ + + M + R
Sbjct: 355 ALLNGLYKNAEFGMVSSILER 375
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 90/216 (41%), Gaps = 12/216 (5%)
Query: 265 LVSGVRALIEMFSVL-------GLYEMAKYVIKKTERKVSY-----YNILIKEMCRRCDF 312
L G+ + F++L G ++ A ++++K E Y YN L+ C++ +
Sbjct: 167 LAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRY 226
Query: 313 KGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIF 372
K L+ M G TYN + LC++ + A LL+ M +P+ ITY
Sbjct: 227 KAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTL 286
Query: 373 IVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYK 432
I R GK +VA F++M L P T+ I G+ +A + + +
Sbjct: 287 ISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGL 346
Query: 433 SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLR 468
+ + Y L + KN M ++L M G+R
Sbjct: 347 RPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVR 382
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 68/152 (44%), Gaps = 8/152 (5%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+ G C + + + V M + ++ E Y L+ + + +F +L
Sbjct: 322 IAGHCTTGNIGEALRLMDV-----MVSHGLRPNEVT---YGALLNGLYKNAEFGMVSSIL 373
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
MR G ++Y ++ LCKNG +A +LL++ML + +PD +T+ + I RV
Sbjct: 374 ERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRV 433
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
GK + A +M K GL P ++ I Y
Sbjct: 434 GKINNAKEIMCKMYKTGLVPNGILYSTLIYNY 465
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 48/116 (41%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +++LI R ++++ +M + G P + Y+ ++ CK G +A
Sbjct: 420 VVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYA 479
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
M D T + + CR GK + A F N M + GL P T I GY
Sbjct: 480 VMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGY 535
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 80/197 (40%), Gaps = 5/197 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+K +C +R + + +N L C++G +DA L+ EM+
Sbjct: 563 YGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMV 622
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG-LQPRLATHAAFIKGYFIFYRY 417
+ PD TY I C+ GK A + +++G L P A + + + G + + +
Sbjct: 623 TNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDG-LLKHGH 681
Query: 418 EDAYKYVVLSA-DKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
A Y+ +K + ++++ + + ++LS M L N++ Y
Sbjct: 682 ARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNI 741
Query: 477 VLKHLHTSHQEHMAKCL 493
+L H MA+C
Sbjct: 742 LLHGYAKRHA--MARCF 756
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 60/153 (39%)
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P T N VLG L K + + ML + PD T+ I + C GKF A
Sbjct: 135 GLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAKGICPDVATFNILLNALCERGKFKNA 194
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
+M + G+ P T+ + Y RY+ A + + A K Y++
Sbjct: 195 GFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDN 254
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+++ +L M +N + PN Y ++
Sbjct: 255 LCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLI 287
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 47/112 (41%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N+LI + C R + K +L+ +M Q P TYN + L + A +L+ +L
Sbjct: 809 FNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLL 868
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
P Y I CRVG A ++M G+ +A ++G
Sbjct: 869 ESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRG 920
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 75/183 (40%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ LI C+ K + M G T N ++ C+ G+ +A + M
Sbjct: 458 YSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMS 517
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+++T++ I G AF+ F++M G P L T+ +KG I
Sbjct: 518 RMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHIN 577
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A K+ + N++++ + ++ N A +++EM+ N P+ Y ++
Sbjct: 578 EALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLI 637
Query: 479 KHL 481
L
Sbjct: 638 AGL 640
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 8/117 (6%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P Y ++ L K+G A + EEML ++ PD + + + I R GK +
Sbjct: 664 PNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDI 723
Query: 389 FNQMVKRGLQPRLATHAAFIKGYF-------IFYRYEDAYKYVVLSADKYKSSSNML 438
+ M + L LAT+ + GY F Y+D ++ L DK+ S +L
Sbjct: 724 LSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLP-DKFSWHSLIL 779
>gi|255661032|gb|ACU25685.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 373
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 89/184 (48%), Gaps = 2/184 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI F + EM C P +TYN ++ LCK + A+A +L++EML
Sbjct: 167 YNTLINGFVGVSKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEML 226
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P ITY + + C+ K ++A +NQ++ GL+P + I G + +
Sbjct: 227 EKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQ 286
Query: 419 DAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
A + +++ + N++ ++ L K+ + A + + +++NGL+P++ Y
Sbjct: 287 LAL-MLYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNALGIWARILRNGLQPDIVSYNIT 345
Query: 478 LKHL 481
LK L
Sbjct: 346 LKGL 349
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 100/239 (41%), Gaps = 9/239 (3%)
Query: 269 VRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCE 328
++ IE++ ++G ++ + V +NI+++ + D + M Q G
Sbjct: 41 IKDCIELWELMG---------REDSQNVVSFNIMMRGLFGNGDVDKAISIWELMTQSGFV 91
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
+ TY ++ CKNG + +L + DA Y I C+ K D A +
Sbjct: 92 EDSTTYGILVDGFCKNGYINKSLRVLGIAEEKGGVLDAFAYSAMINGLCKEAKLDEAVSV 151
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
N M+K G P + I G+ +++DA + S + + Y+ L + K
Sbjct: 152 LNGMIKNGGTPNAHVYNTLINGFVGVSKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCK 211
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSVE 507
A +++ EM++ G +P V Y ++K L H+ MA L ++ S L V+
Sbjct: 212 GERFAEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQ 270
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 81/194 (41%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
+ Y IL+ C+ +L + G Y+ ++ LCK + +A +L
Sbjct: 95 TTYGILVDGFCKNGYINKSLRVLGIAEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNG 154
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
M+ P+A Y I V KFD A F +M P + T+ I G R
Sbjct: 155 MIKNGGTPNAHVYNTLINGFVGVSKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGER 214
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
+ +AY V +K + YSLL + + MA + ++++ NGL+P+V +
Sbjct: 215 FAEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNI 274
Query: 477 VLKHLHTSHQEHMA 490
++ L + + +A
Sbjct: 275 LIHGLCSVGKTQLA 288
>gi|15223266|ref|NP_172337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75262899|sp|Q9FRS4.1|PPR22_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08610
gi|9802579|gb|AAF99781.1|AC003981_31 F22O13.9 [Arabidopsis thaliana]
gi|332190196|gb|AEE28317.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 82/184 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YNILI +C+ D +M + C P +TYN VLG + K G DA ELL
Sbjct: 349 VITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLG 408
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ C P ITY I + G A ++QM+ G+ P T + I G+
Sbjct: 409 LLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRAN 468
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E+A + + ++++ Y L+ K MA V+ M+ G +P+ ++Y
Sbjct: 469 LVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYT 528
Query: 476 RVLK 479
++K
Sbjct: 529 AIVK 532
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 102/249 (40%), Gaps = 13/249 (5%)
Query: 230 EKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVI 289
+KA L V++ S + + ++ +G C +R + + + L VI
Sbjct: 156 DKAMCILRVMVMSGGVPDTITYNMI-----IGNLCKKGHIRTALVLLEDMSLSGSPPDVI 210
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
YN +I+ M + + + Q GC P +TY ++ ++C+ A
Sbjct: 211 T--------YNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSAR 262
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A E+LE+M C+PD +TY + Y+CR G + + ++ GL+ T+ +
Sbjct: 263 AIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLH 322
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
+++ + + + + + Y++L + K A + +M++ P
Sbjct: 323 SLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLP 382
Query: 470 NVSVYRRVL 478
++ Y VL
Sbjct: 383 DIVTYNTVL 391
>gi|414883803|tpg|DAA59817.1| TPA: hypothetical protein ZEAMMB73_625576 [Zea mays]
Length = 350
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 83/173 (47%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ +I +C+ L +M G P T YN ++ C GQ +A LL++M
Sbjct: 176 YSSVIDGLCKAQAMDKAEASLQQMLYKGVMPNTRPYNSLIHGYCSLGQLVEAVRLLKKMS 235
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
G + +TY + I Y C++G+ A + F+ MV+RG +P T+ + + GY
Sbjct: 236 GGGLQLNVVTYNMLIDYYCKIGRCAEARSIFDSMVRRGQKPNATTYCSLLHGYATKGALV 295
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
D + + L + ++++L + K+ A V +EM +NGLRPN+
Sbjct: 296 DMHDLLDLMIRDGIPIEHRVFNILIYAYAKHETVDKAMAVFAEMRQNGLRPNL 348
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 113/276 (40%), Gaps = 24/276 (8%)
Query: 204 NCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEV-LNQ-VG 261
N GRLD L D + C G L + ++ L + WRV V LNQ +
Sbjct: 25 NVGRLD--------LADILIRCFC----NVGRLDLAFAAFGLFLRTGWRVQNVVLNQLIK 72
Query: 262 GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
G C G R M V Y V YN LIK +C + +LL+
Sbjct: 73 GLC--DGKRTGDAMDMVFRRMPELGYT-----PDVFSYNALIKGLCAEKKSQEALELLLH 125
Query: 322 MRQVG---CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCR 378
M G C P ++YN V+ L K G+ A L EM G+ PD +TY I C+
Sbjct: 126 MTANGGYNCSPDVVSYNIVIDGLFKEGEVDKAYFLFHEMPGQGFPPDLVTYSSVIDGLCK 185
Query: 379 VGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML 438
D A QM+ +G+ P + + I GY + +A + + + + +
Sbjct: 186 AQAMDKAEASLQQMLYKGVMPNTRPYNSLIHGYCSLGQLVEAVRLLKKMSGGGLQLNVVT 245
Query: 439 YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
Y++L + K A+++ M++ G +PN + Y
Sbjct: 246 YNMLIDYYCKIGRCAEARSIFDSMVRRGQKPNATTY 281
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 93/217 (42%), Gaps = 25/217 (11%)
Query: 276 FSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE-MRQVGCEPITLTY 334
F+ GL+ + ++ N LIK +C D++ M ++G P +Y
Sbjct: 49 FAAFGLFLRTGWRVQNV-----VLNQLIKGLCDGKRTGDAMDMVFRRMPELGYTPDVFSY 103
Query: 335 NYVLGVLCKNGQDADACELLEEML---GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQ 391
N ++ LC + +A ELL M G NC PD ++Y I I + G+ D A+ F++
Sbjct: 104 NALIKGLCAEKKSQEALELLLHMTANGGYNCSPDVVSYNIVIDGLFKEGEVDKAYFLFHE 163
Query: 392 MVKRGLQPRLATHAAFIKGYFIFYRYEDA--------YKYVVLSADKYKSSSNMLYSLLA 443
M +G P L T+++ I G + A YK V+ + Y S + SL
Sbjct: 164 MPGQGFPPDLVTYSSVIDGLCKAQAMDKAEASLQQMLYKGVMPNTRPYNSLIHGYCSL-- 221
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKH 480
V A +L +M GL+ NV Y ++ +
Sbjct: 222 ------GQLVEAVRLLKKMSGGGLQLNVVTYNMLIDY 252
>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
Length = 382
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 111/259 (42%), Gaps = 30/259 (11%)
Query: 234 GFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTE 293
G++P L+S A+ + G C + +E+F+ + + +
Sbjct: 147 GYVPTLVSFNAI--------------ITGLCRARRLADALEVFN--------EMIDRDFH 184
Query: 294 RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACEL 353
+ Y+++I +C+ + LL M GC P + Y ++ G+ A L
Sbjct: 185 PNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGL 244
Query: 354 LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
L M+ + C PD +TY + I C+VG+ D A F ++V P + T++A I GY
Sbjct: 245 LRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCR 304
Query: 414 FYRYEDAYKYVVLSADK--YKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
R ++ K + A + + + M++ L S+ D+N A + EM + G P+
Sbjct: 305 ASRVDEGGKVMREMACRPNVVTYNTMIWGL--SMVDRNEE---AYGMFREMSECGFVPDA 359
Query: 472 SVYRRVLKHLH-TSHQEHM 489
YR + + L H H+
Sbjct: 360 RTYRGLKRALRMIDHPPHV 378
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 1/191 (0%)
Query: 285 AKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG-CEPITLTYNYVLGVLCK 343
A + + V Y LI +C+ DL +M G C P TYN ++ LCK
Sbjct: 35 ASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCK 94
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
+ A ++ E R+ PD +TY + ++G+ D A F QM + G P L +
Sbjct: 95 QDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVS 154
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
A I G R DA + D+ + + YS++ K++ A+ +L M+
Sbjct: 155 FNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMV 214
Query: 464 KNGLRPNVSVY 474
G RP++ Y
Sbjct: 215 SEGCRPDLVAY 225
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 90/209 (43%), Gaps = 5/209 (2%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
AL++ + A+ VI + ++ V YN L+ + + +M +
Sbjct: 87 ALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEE 146
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P +++N ++ LC+ + ADA E+ EM+ R+ HP+ +TY + I C+ + D A
Sbjct: 147 GYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEA 206
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
++MV G +P L + + G+ R + A + + + Y+++
Sbjct: 207 QQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDK 266
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
K A + E++ N PNV Y
Sbjct: 267 LCKVGRVDDAHEIFRELVANKCSPNVVTY 295
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 75/162 (46%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P LTY ++ LCK + DA +EEM R PDA Y + C+ K + A
Sbjct: 7 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
F +MVK+ + P + T+ I G +R E AY+ A K + + Y+ L K
Sbjct: 67 FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
+ V AK+V +M+++ PNV Y ++ L S + A
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAA 168
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 91/196 (46%)
Query: 286 KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNG 345
K V ++ V YN LI +C+ + +L EM G P ++YN ++ CK
Sbjct: 69 KMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKK 128
Query: 346 QDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
A ++ ++M+ NC P+ +TY I + GK A + MVK+G+ P +AT++
Sbjct: 129 DLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYS 188
Query: 406 AFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKN 465
I G+ R ++A+K + + + + + Y++L + + + A + M +
Sbjct: 189 CLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQR 248
Query: 466 GLRPNVSVYRRVLKHL 481
P V Y +L+ L
Sbjct: 249 RCHPTVVTYNTLLRAL 264
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 6/179 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +++ +C+ + EM G +P YN+VL LC+ + +A L E+M+
Sbjct: 12 YGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMV 71
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ +P+ +TY I C+ + + A+ F +M +G P ++ I G F + +
Sbjct: 72 KQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDG---FCKKK 128
Query: 419 D--AYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
D A K V + N++ Y+ L K+ A VL M+K G+ PNV+ Y
Sbjct: 129 DLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATY 187
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 65/152 (42%), Gaps = 13/152 (8%)
Query: 244 ALTKKGIWRVVEVLNQVGGSCLVSG---VRALIEMFSVLGLYEMAKYVIKKTERKVSYYN 300
+ KKG+ N SCL+ G VR + E +L + V + V YN
Sbjct: 174 GMVKKGV-----TPNVATYSCLIDGFCKVRRVDEAHKLL-----EQMVTQGIAPTVVTYN 223
Query: 301 ILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGR 360
IL+ +CR + L M Q C P +TYN +L LC + Q A L EM+ +
Sbjct: 224 ILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAK 283
Query: 361 NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
C PDAITY+ R GK A +M
Sbjct: 284 GCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 315
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 80/190 (42%), Gaps = 13/190 (6%)
Query: 234 GFLPVLISSKALT-----KKGIWRVVEVLNQVGGSCLVSGV---RALIEMFSVLGLYEMA 285
G++P +S L KK + +V +++ S V V LI+ S G + A
Sbjct: 109 GYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAA 168
Query: 286 KYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
V+ +K V+ Y+ LI C+ LL +M G P +TYN +L
Sbjct: 169 AEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNS 228
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
LC+ + DA +L M R CHP +TY + C + D A + +M+ +G P
Sbjct: 229 LCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPD 288
Query: 401 LATHAAFIKG 410
T+ G
Sbjct: 289 AITYDTLAWG 298
>gi|413949009|gb|AFW81658.1| hypothetical protein ZEAMMB73_233967 [Zea mays]
Length = 637
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 145/364 (39%), Gaps = 8/364 (2%)
Query: 121 AMVNGPYATPKQVSEIIELLRSG-DSETESKLLSMSVSLSNASVIEILRVLNSEKVSALC 179
A + P + + I +++ +G D+ E+ L ++S L A V+ +L +
Sbjct: 152 AATSNPEGVGRVCAAIADVIAAGADANLEAALSALSPPLCEAVVLAVLHRFKHAHRPSYR 211
Query: 180 FLKYMREIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVL 239
F ++ + C +++ G+ +E+M LL + L+ AF
Sbjct: 212 FFRWATASGGFTHTTITYCKMLL-ILGKTRQFESMVALLQEMGKAGT-LSMDAFKVAIKS 269
Query: 240 ISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVS-- 297
++ K + V E++ + G V L+ + GL A+ V K + S
Sbjct: 270 FAAAGEIKNAV-GVFELMRKNGFDDGVESFNCLLVALANEGLGREARQVFDKMLGQYSPD 328
Query: 298 --YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
Y L+ C + + EM + G +P + +N ++ L + + +A ++ E
Sbjct: 329 LRSYTALMLAWCNARNLVEAGRVWNEMLEKGMKPDVVVHNTMIEGLLRGQRQHEAVKMFE 388
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M + P+ TY + I C+ GK D+A F +M + QP +AT+ + GY
Sbjct: 389 LMKAKGPPPNVWTYTMLICNHCKRGKMDMAMECFEEMQEARCQPDVATYTCLLVGYGNAK 448
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R + + K Y+ L L P A + +M+K GL P + Y
Sbjct: 449 RMDRVTAVLEEMTQKGCPPDARTYNALIKLLTNRKMPDDAARIYKKMIKKGLDPTIHTYN 508
Query: 476 RVLK 479
++K
Sbjct: 509 MMMK 512
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
+L EM Q GC P TYN ++ +L DA + ++M+ + P TY + ++ S
Sbjct: 456 VLEEMTQKGCPPDARTYNALIKLLTNRKMPDDAARIYKKMIKKGLDPTIHTYNM-MMKSY 514
Query: 378 RVGKFDVAFN--FFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV 424
+G + A + +M +RG+ P + ++ FI G+ R E+AYKY+
Sbjct: 515 FLGDRNYAMGCAVWEEMHRRGICPDVNSYTVFISGHIRHGRPEEAYKYI 563
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 17/144 (11%)
Query: 263 SCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRD---LL 319
+CL+ G M V + E + K YN LIK + R K P D +
Sbjct: 438 TCLLVGYGNAKRMDRVTAVLE--EMTQKGCPPDARTYNALIKLLTNR---KMPDDAARIY 492
Query: 320 VEMRQVGCEPITLTYN-----YVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIV 374
+M + G +P TYN Y LG + A C + EEM R PD +Y +FI
Sbjct: 493 KKMIKKGLDPTIHTYNMMMKSYFLG----DRNYAMGCAVWEEMHRRGICPDVNSYTVFIS 548
Query: 375 YSCRVGKFDVAFNFFNQMVKRGLQ 398
R G+ + A+ + +M+ +G++
Sbjct: 549 GHIRHGRPEEAYKYIEEMINKGMK 572
>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
microcephala]
Length = 431
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ +L EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 212 VYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 271
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G A + ++M +GL+P T+ I G
Sbjct: 272 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEG 331
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ A+++ + + Y+ L S + V A+ +L EM+ GL+P+ Y
Sbjct: 332 DLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYT 391
Query: 476 RVL 478
++
Sbjct: 392 MII 394
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 54/112 (48%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ R D L M G +P TY+ ++ LCK + DA EL +EML
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 239
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ P+ +T+ I C+ G+ D+A + QM+ + L P L T+ I G
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 291
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 78/181 (43%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ C+ D + + + + + G P ++YN ++ + G + L M
Sbjct: 144 FFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAM 203
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
L PD TY + I C+ K D A F++M+ +GL P T I G+ R
Sbjct: 204 LASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRV 263
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ A + + S + Y+ L K + A +++ EM GL+P+ Y +
Sbjct: 264 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTL 323
Query: 478 L 478
+
Sbjct: 324 I 324
>gi|384247929|gb|EIE21414.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 448
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 93/221 (42%), Gaps = 35/221 (15%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNILI + +++ +L + G +P TYN +L ++GQ A + E ML
Sbjct: 146 YNILIDIHGKMGNWQEAVQVLDALEDQGTKPEVRTYNTILSACNRSGQPEHALRVYERML 205
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P A TY I + GK + A F MV+RG + + T+++ I R++
Sbjct: 206 ADGAQPTATTYTALISAYGKTGKIEEALRIFQDMVRRGCERNVITYSSLISACEKAGRWQ 265
Query: 419 DAYKYV-----------------VLSA----DKYKSSSNML--------------YSLLA 443
A + + +LSA ++K++ ++ Y++L
Sbjct: 266 LALELLDEMHRDNCKPNTVTFNALLSACAQGGQWKAAQDVFEQMPSCGCKPDAVSYAILI 325
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTS 484
S D+ N A L EM G RP+V VY V++ L S
Sbjct: 326 SAFDRGNQWCRALQALDEMQGQGHRPDVGVYNVVIEALTRS 366
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 75/162 (46%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
D+ ++ + GC P +TYN ++ + K G +A ++L+ + + P+ TY +
Sbjct: 129 DVYGQLLREGCTPNLVTYNILIDIHGKMGNWQEAVQVLDALEDQGTKPEVRTYNTILSAC 188
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
R G+ + A + +M+ G QP T+ A I Y + E+A + + +
Sbjct: 189 NRSGQPEHALRVYERMLADGAQPTATTYTALISAYGKTGKIEEALRIFQDMVRRGCERNV 248
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ YS L S +K +A +L EM ++ +PN + +L
Sbjct: 249 ITYSSLISACEKAGRWQLALELLDEMHRDNCKPNTVTFNALL 290
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 5/164 (3%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMA-----KYVIKKTERKVSYYNILIKEM 306
RV E + G + ALI + G E A V + ER V Y+ LI
Sbjct: 199 RVYERMLADGAQPTATTYTALISAYGKTGKIEEALRIFQDMVRRGCERNVITYSSLISAC 258
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
+ ++ +LL EM + C+P T+T+N +L + GQ A ++ E+M C PDA
Sbjct: 259 EKAGRWQLALELLDEMHRDNCKPNTVTFNALLSACAQGGQWKAAQDVFEQMPSCGCKPDA 318
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
++Y I I R ++ A ++M +G +P + + I+
Sbjct: 319 VSYAILISAFDRGNQWCRALQALDEMQGQGHRPDVGVYNVVIEA 362
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 77/180 (42%), Gaps = 2/180 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y +I + + +L+ EMR G TY+ ++ V K + A ++
Sbjct: 73 VYTYTTIISQCGSHQQLRKALELVAEMRGHGVVCNVHTYSALMNVCIKANELELALDVYG 132
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
++L C P+ +TY I I ++G + A + + +G +P + T+ +
Sbjct: 133 QLLREGCTPNLVTYNILIDIHGKMGNWQEAVQVLDALEDQGTKPEVRTYNTILSACNRSG 192
Query: 416 RYEDAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ E A + Y + AD + ++ Y+ L S + K A + +M++ G NV Y
Sbjct: 193 QPEHALRVYERMLADGAQPTATT-YTALISAYGKTGKIEEALRIFQDMVRRGCERNVITY 251
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 55/134 (41%), Gaps = 8/134 (5%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
+LI G +++A ++ + R +N L+ + +K +D+ +M
Sbjct: 253 SLISACEKAGRWQLALELLDEMHRDNCKPNTVTFNALLSACAQGGQWKAAQDVFEQMPSC 312
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV- 384
GC+P ++Y ++ + Q A + L+EM G+ PD Y + I R G
Sbjct: 313 GCKPDAVSYAILISAFDRGNQWCRALQALDEMQGQGHRPDVGVYNVVIEALTRSGVLSAQ 372
Query: 385 --AFNFFNQMVKRG 396
A F ++G
Sbjct: 373 LKAAQIFQAATRQG 386
>gi|410109919|gb|AFV61039.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
duartei]
Length = 412
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ +L EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 193 VYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 252
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G A + ++M +GL+P T+ I G
Sbjct: 253 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLINGCCKEG 312
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ A+++ + + Y+ L S + V A+ +L EM+ GL+P+ Y
Sbjct: 313 DLDSAFEHRKRMIQENIRLDEVAYTALISGXCQEGRSVDAEKMLREMLSVGLKPDARTYT 372
Query: 476 RVL 478
++
Sbjct: 373 MII 375
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 54/112 (48%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ R D L M G +P TY+ ++ LCK + DA EL +EML
Sbjct: 161 YNTLMNGYIRXGDLDEGFXLKSXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 220
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ P+ +T+ I C+ G+ D+A + QM+ + L P L T+ I G
Sbjct: 221 VKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 272
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 78/181 (43%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ C+ D + + + + + G P ++YN ++ + G + L M
Sbjct: 125 FFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDLDEGFXLKSXM 184
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
L PD TY + I C+ K D A F++M+ +GL P T I G+ R
Sbjct: 185 LASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRV 244
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ A + + S + Y+ L K + A +++ EM GL+P+ Y +
Sbjct: 245 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTL 304
Query: 478 L 478
+
Sbjct: 305 I 305
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 88/198 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y ILI C+ +L EM Q P T+TY+ ++ LCK+G+ + +L++
Sbjct: 587 VHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLID 646
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM R D ITY I C+ G D A FN+M +G++P T + G
Sbjct: 647 EMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGG 706
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R +DA + K +Y+++ H K A +LS+M +NG PN +
Sbjct: 707 RLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFD 766
Query: 476 RVLKHLHTSHQEHMAKCL 493
++ L + A+ L
Sbjct: 767 IIINALFKKDENDKAEKL 784
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 81/179 (45%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N LIK +C + K ++ G + ++Y ++ +CK G A +LL ++ G
Sbjct: 381 NTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDG 440
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
R P+ Y I C+ A+ F++M +G+ + T++ I G+ I + ++
Sbjct: 441 RLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKE 500
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + K + Y++L K AK+VL+ M+K ++P+V Y ++
Sbjct: 501 AIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLM 559
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 81/179 (45%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N LIK +C + K ++ G + ++Y ++ +C+ G A + L ++ G
Sbjct: 67 NTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLRKIDG 126
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
R P+ Y I C+ A+ F++M +G+ + T++ I G+ I + ++
Sbjct: 127 RLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKE 186
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + + K + + Y++L K AK+VL+ M+K ++ NV Y ++
Sbjct: 187 ALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLM 245
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 72/176 (40%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI +CR D + L ++ +P YN ++ LCK ++A L EM
Sbjct: 101 YATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMT 160
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ + +TY I C VGK A N MV + + P + T+ + + +
Sbjct: 161 VKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVK 220
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+A + + S+ + YS L + A++V + M G+ P+V Y
Sbjct: 221 EAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSY 276
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 53/137 (38%), Gaps = 35/137 (25%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI +C+ L +M+ G P T T+ +L LCK G+ DA E+ +
Sbjct: 657 VITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQ 716
Query: 356 EMLGRN-----------------------------------CHPDAITYEIFIVYSCRVG 380
++L + C P+A+T++I I +
Sbjct: 717 DLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKD 776
Query: 381 KFDVAFNFFNQMVKRGL 397
+ D A QM+ RGL
Sbjct: 777 ENDKAEKLLRQMIARGL 793
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 86/237 (36%), Gaps = 37/237 (15%)
Query: 280 GLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
GL+ ++ +K V Y+ LI C K LL EM P TY ++
Sbjct: 468 GLF--SEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVD 525
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEI-----FIVYS------------------ 376
L K G+ +A +L ML PD TY +VY
Sbjct: 526 ALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTP 585
Query: 377 ------------CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV 424
C+ D A N F +M ++ + P T+++ + G R + +
Sbjct: 586 DVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLI 645
Query: 425 VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
D+ + + + Y+ L KN + A + ++M G+RPN + +L L
Sbjct: 646 DEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGL 702
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 66/156 (42%), Gaps = 9/156 (5%)
Query: 245 LTKKGI-WRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILI 303
+T KGI VV + G C+V ++ + + +V+ V+K V YNIL+
Sbjct: 159 MTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVM--------VLKTINPNVCTYNILV 210
Query: 304 KEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH 363
+C+ K + +L M + + +TY+ ++ + A + M
Sbjct: 211 DALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVT 270
Query: 364 PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
PD +Y I I C++ + D A N F +M+ P
Sbjct: 271 PDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPP 306
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 47/115 (40%), Gaps = 1/115 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YNI+I C+ +L EM PI + +N +L K + A L
Sbjct: 273 VHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPI-IQFNKILDSFAKMKHYSTAVSLSH 331
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ + PD T I I C +G+ F+ +++KRG P T IKG
Sbjct: 332 RLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKG 386
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 66/156 (42%), Gaps = 15/156 (9%)
Query: 280 GLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
GL+ ++ +K V Y+ LI C K LL M P TYN ++
Sbjct: 154 GLF--SEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVD 211
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEI-----FIVYSCRVGKFDVAFNFFNQMVK 394
LCK G+ +A +L ML + ITY F+VY + + + FN M
Sbjct: 212 ALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQ-----HVFNAMSL 266
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDA---YKYVVLS 427
G+ P + ++ I G+ R + A +K ++LS
Sbjct: 267 MGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILS 302
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 57/136 (41%)
Query: 343 KNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLA 402
+N DA + +L ++L R PD +T I C G+ A +F ++++ +G Q
Sbjct: 40 QNVDDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQV 99
Query: 403 THAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM 462
++A I G A K++ + + +Y+ + K A + SEM
Sbjct: 100 SYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEM 159
Query: 463 MKNGLRPNVSVYRRVL 478
G+ NV Y ++
Sbjct: 160 TVKGISANVVTYSTLI 175
>gi|255660960|gb|ACU25649.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 376
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 88/187 (47%), Gaps = 2/187 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI + F+ + EM + C P +TYN ++ LCKN +A L++
Sbjct: 164 VHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVK 223
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
E+L + P ITY + + C + + A +NQ+ +G +P + H I G
Sbjct: 224 ELLDKGLDPGVITYSMLMKGLCLDHRVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVG 283
Query: 416 RYEDAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + A + + +K + N++ ++ L K+ + A + + +++NGL P++ Y
Sbjct: 284 KMQLALS-LYFDMNHWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISY 342
Query: 475 RRVLKHL 481
LK L
Sbjct: 343 NITLKGL 349
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 98/226 (43%)
Query: 282 YEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+E+ + + + R VS +NI+++ + + M++ G ++TY ++
Sbjct: 45 FELWEMMGSEGNRSVSSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGF 104
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
CKNG + +LE + DA Y I C+ D A + N M+K G +P +
Sbjct: 105 CKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRALSVLNDMIKSGCKPNV 164
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
+ I G ++EDA + + S + + Y+ L + KN A N++ E
Sbjct: 165 HVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKE 224
Query: 462 MMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSVE 507
++ GL P V Y ++K L H+ A L ++ +S V+
Sbjct: 225 LLDKGLDPGVITYSMLMKGLCLDHRVERALQLWNQVTSKGFKPDVQ 270
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y L+ +C+ +LL M GCEP + Y+ ++ CK G+ A E+
Sbjct: 444 VVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFL 503
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M P TY I + G+ D+A +QM+K P + T+ A I G
Sbjct: 504 QMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIG 563
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A K + L +K S + + Y+ L K ++ ++ ++M + G PN YR
Sbjct: 564 ESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYR 623
Query: 476 RVLKHL 481
++ HL
Sbjct: 624 VLINHL 629
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 85/211 (40%), Gaps = 16/211 (7%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y ILI C+ + + L EMR VGC P +TY ++ K Q A ++
Sbjct: 323 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 382
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV----------------KRGLQP 399
M+ C P+ +TY + C+ G AF + +++ + L P
Sbjct: 383 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAP 442
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
+ T+ A + G ++ + A++ + ++++Y L K A+ V
Sbjct: 443 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 502
Query: 460 SEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
+M K G P+V Y ++ + + +A
Sbjct: 503 LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLA 533
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 83/199 (41%), Gaps = 28/199 (14%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQD----ADACE 352
S +N L+ C D+ LL M GC P + YN +G +C GQ+ D +
Sbjct: 178 SLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSIC--GQEKLPSPDLLD 235
Query: 353 LLE----EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT----- 403
L E EML NC + + F C VGKFD AF +M+++G P +T
Sbjct: 236 LAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVI 295
Query: 404 ----HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
HA ++ F+ ++ K V ++ D Y Y++L K A+ +
Sbjct: 296 TFLCHATKVEKAFLLFQ---EMKMVGVTPDVYT------YTILIDSFCKAGLIEQAQWLF 346
Query: 460 SEMMKNGLRPNVSVYRRVL 478
EM G P V Y ++
Sbjct: 347 EEMRSVGCSPTVVTYTALI 365
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 5/143 (3%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI+ F G + A+ V + + V Y LI M + +L +M +
Sbjct: 484 ALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD 543
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
C P +TY ++ LC+ G+ A +LL M + C P+ +TY I + GK D++
Sbjct: 544 SCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLS 603
Query: 386 FNFFNQMVKRGLQPRLATHAAFI 408
+ F QM ++G P T+ I
Sbjct: 604 LDLFTQMSRKGCSPNYVTYRVLI 626
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 68/153 (44%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P +TY ++ LCK + A ELL+ ML C P+ I Y+ I C+ GK D A
Sbjct: 442 PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 501
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
F QM K G P + T+ + I F R + A K + + + + Y+ + +
Sbjct: 502 FLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCR 561
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A +LS M + G PNV Y ++ L
Sbjct: 562 IGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 594
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 91/221 (41%), Gaps = 21/221 (9%)
Query: 279 LGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLT 333
+G ++ A +IK+ RK S Y+ +I +C + L EM+ VG P T
Sbjct: 266 VGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYT 325
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
Y ++ CK G A L EEM C P +TY I + + A + F++MV
Sbjct: 326 YTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMV 385
Query: 394 KRGLQPRLATHAAFIKGYF----IFYRYEDAYKYVVLS-----------ADKYKSSSNML 438
G +P T+ A + G I +E K + S D++ + N++
Sbjct: 386 DAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVV 445
Query: 439 -YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
Y L K + A +L M+ +G PN VY ++
Sbjct: 446 TYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALI 486
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 82/211 (38%), Gaps = 17/211 (8%)
Query: 306 MCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPD 365
+C F L+ EM + G P T TY+ V+ LC + A L +EM PD
Sbjct: 263 LCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 322
Query: 366 AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV 425
TY I I C+ G + A F +M G P + T+ A I Y + A
Sbjct: 323 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 382
Query: 426 LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM----------------KNGLRP 469
D +++ Y L K N A V ++++ ++ L P
Sbjct: 383 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAP 442
Query: 470 NVSVYRRVLKHLHTSHQ-EHMAKCLSSRYSS 499
NV Y ++ L +H+ +H + L + SS
Sbjct: 443 NVVTYGALVDGLCKAHKVDHAHELLDAMLSS 473
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 69/162 (42%), Gaps = 13/162 (8%)
Query: 270 RALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKG-------PRDLLVEM 322
R LI GL + A+ ++ E K +Y+ ++ RC +G +L EM
Sbjct: 623 RVLINHLCAAGLLDKARLLLG--EMKQTYWPKYLQGY--RCAIQGFSKSFIASLGILEEM 678
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG--RNCHPDAITYEIFIVYSCRVG 380
G PI Y ++ K G+ A EL +EM+ + D Y I C
Sbjct: 679 ESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLAS 738
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
+ + AF +++M +RG P L+ IKG ++++A +
Sbjct: 739 QVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQ 780
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 85/222 (38%), Gaps = 37/222 (16%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y +I +CR + + LL M + GC P +TY ++ L K G+ + +L
Sbjct: 549 VVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFT 608
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVA------------------------------ 385
+M + C P+ +TY + I + C G D A
Sbjct: 609 QMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSF 668
Query: 386 ---FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA---YKYVVLSADKYKSSSNMLY 439
+M G P + I + R E A +K ++ K+ ++M
Sbjct: 669 IASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYA 728
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
SL+ +L + A + SEM + G P +SV+ ++K L
Sbjct: 729 SLIQALCLASQVE-EAFRLYSEMTRRGFVPELSVFVCLIKGL 769
>gi|18394846|ref|NP_564110.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174883|sp|Q9LN22.1|PPR54_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g20300, mitochondrial; Flags: Precursor
gi|9558596|gb|AAF88159.1|AC026234_10 Contains similarity to a hypothetical protein T3P18.15 gi|5454201
from Arabidopsis thaliana BAC T3P18 gb|AC005698 and
contains multiple PPR PF|01535 repeats [Arabidopsis
thaliana]
gi|17386104|gb|AAL38598.1|AF446865_1 At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|15450347|gb|AAK96467.1| At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|332191838|gb|AEE29959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 85/191 (44%), Gaps = 8/191 (4%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V Y L++ CR + + EM+ G EP TY+ V+ LC+ GQ + A +
Sbjct: 252 EPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHD 311
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+ +ML C P+AIT+ + + G+ + +NQM K G +P T+ I+ +
Sbjct: 312 VFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHC 371
Query: 413 IFYRYEDAYKYVVLSADKY----KSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLR 468
E+A K + K S+ N ++ + D N A + S+MM+
Sbjct: 372 RDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNG----AHRMYSKMMEAKCE 427
Query: 469 PNVSVYRRVLK 479
PN Y +++
Sbjct: 428 PNTVTYNILMR 438
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Query: 288 VIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQD 347
+ KK E S +N + + + ++ D G + +M + CEP T+TYN ++ + +
Sbjct: 387 IKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKST 446
Query: 348 ADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV-KRGLQPRLA 402
++ +EM + P+ TY + + C +G ++ A+ F +MV ++ L P L+
Sbjct: 447 DMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLS 502
Score = 45.1 bits (105), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 75/174 (43%), Gaps = 3/174 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI+ CR + + +L M + CE T+N + + K A + +M+
Sbjct: 363 YNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMM 422
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C P+ +TY I + D+ +M + ++P + T+ + + +
Sbjct: 423 EAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWN 482
Query: 419 DAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL--RP 469
+AYK + + +K + S LY ++ + + + ++ +M++ GL RP
Sbjct: 483 NAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGLVARP 536
>gi|302796396|ref|XP_002979960.1| hypothetical protein SELMODRAFT_12814 [Selaginella moellendorffii]
gi|300152187|gb|EFJ18830.1| hypothetical protein SELMODRAFT_12814 [Selaginella moellendorffii]
Length = 220
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 8/169 (4%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
LL M++ YN +L LCK+G++ +A +LL M +C PD TY I I C
Sbjct: 39 LLEHMKKAEVPANAKLYNIILTHLCKHGKEKEALDLLHSMATTSCAPDIYTYNILINALC 98
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ G D A + F +M RG P + T+ + + G+ + E+A K L A+ + S
Sbjct: 99 KAGMMDKAMDLFVEMPTRGCIPDVVTYNSIVDGFCKAGKVEEANK---LFAEMMRISKEG 155
Query: 438 L-----YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
L Y L S K + +L EM++ G +PN+ + V + L
Sbjct: 156 LVDAISYVALISTICKLGKGKLGFQLLREMLEKGFKPNLVTFNVVFEGL 204
>gi|255661030|gb|ACU25684.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 376
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 113/242 (46%), Gaps = 19/242 (7%)
Query: 252 RVVEVLNQVGG-------SCLVSGV---RALIEMFSVLGLYEMAKYVIKKTERKVSY-YN 300
RV+E+ + GG S +++G+ L E SVL +IK ++ YN
Sbjct: 115 RVLEIAEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVL------NGMIKNGGTPNAHVYN 168
Query: 301 ILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGR 360
LI F + EM C P +TYN ++ LCK + A+A +L++EML +
Sbjct: 169 TLINGFMGVSKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEK 228
Query: 361 NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
P ITY + + C+ K ++A +NQ++ GL+P + I G + + A
Sbjct: 229 GWKPCVITYSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLA 288
Query: 421 YKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
+ +++ + N++ ++ L K+ + A + + +++NGL+P++ Y LK
Sbjct: 289 L-MLYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNALGIWARILRNGLQPDIVSYNITLK 347
Query: 480 HL 481
L
Sbjct: 348 GL 349
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 101/239 (42%), Gaps = 9/239 (3%)
Query: 269 VRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCE 328
++ IE++ ++G ++ + V +NI+++ + D + M Q G
Sbjct: 41 IKDCIELWELMG---------REXSQNVVSFNIMMRGLFGNGDVDKAISIWELMTQSGFV 91
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
+ TY ++ CKNG + +LE + DA Y I C+ K D A +
Sbjct: 92 EDSTTYGILVDGFCKNGYINKSLRVLEIAEEKGGVLDAFAYSAMINGLCKEAKLDEAVSV 151
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
N M+K G P + I G+ +++DA + S + + Y+ L + K
Sbjct: 152 LNGMIKNGGTPNAHVYNTLINGFMGVSKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCK 211
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSVE 507
A +++ EM++ G +P V Y ++K L H+ MA L ++ S L V+
Sbjct: 212 GERFAEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQ 270
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 81/194 (41%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
+ Y IL+ C+ +L + G Y+ ++ LCK + +A +L
Sbjct: 95 TTYGILVDGFCKNGYINKSLRVLEIAEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNG 154
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
M+ P+A Y I V KFD A F +M P + T+ I G R
Sbjct: 155 MIKNGGTPNAHVYNTLINGFMGVSKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGER 214
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
+ +AY V +K + YSLL + + MA + ++++ NGL+P+V +
Sbjct: 215 FAEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNI 274
Query: 477 VLKHLHTSHQEHMA 490
++ L + + +A
Sbjct: 275 LIHGLCSVGKTQLA 288
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 45/108 (41%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V NILI +C + L +M + C P +T+N ++ K+G +A +
Sbjct: 269 VQMLNILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNALGIWA 328
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
+L PD ++Y I + C + A F + + + P + T
Sbjct: 329 RILRNGLQPDIVSYNITLKGLCSCSRISFAILFLQDALAKKIAPSIIT 376
>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial; Flags: Precursor
gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 816
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 5/208 (2%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI F LG E A+ + K + K V YNILI R+ +F D+L EM G
Sbjct: 430 LIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNG 489
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
P ++Y ++ LCK + +A + +M R P Y + I C GK + AF
Sbjct: 490 TMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAF 549
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
F +M+K+G++ L T+ I G + + +A ++ + K Y+ L S +
Sbjct: 550 RFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGY 609
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
N + EM ++G++P + Y
Sbjct: 610 GFAGNVQRCIALYEEMKRSGIKPTLKTY 637
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 86/202 (42%), Gaps = 2/202 (0%)
Query: 277 SVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNY 336
+ LG+YE A V + +IL+ +C+ + ++L G P + YN
Sbjct: 337 AALGVYETA--VDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNT 394
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
++ C+ G A +E M + PD + Y I C +G+ + A N+M +G
Sbjct: 395 MIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKG 454
Query: 397 LQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAK 456
+ P + T+ I GY Y ++ + + D + + Y L + K + + A+
Sbjct: 455 VSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQ 514
Query: 457 NVLSEMMKNGLRPNVSVYRRVL 478
V +M G+ P V +Y ++
Sbjct: 515 IVKRDMEDRGVSPKVRIYNMLI 536
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 70/183 (38%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN+LI +C+ L EM P +TYN ++ CK G + ++ E
Sbjct: 214 VFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRE 273
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M + P IT+ + + G + A N +M G P T + GY
Sbjct: 274 RMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNE 333
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ E A + D + S+L + K A+ +L M GL PN +Y
Sbjct: 334 KAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYN 393
Query: 476 RVL 478
++
Sbjct: 394 TMI 396
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 80/211 (37%), Gaps = 35/211 (16%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYV-------------LGV----- 340
+N L+K + + + ++L EM+ +G P T++ + LGV
Sbjct: 287 FNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAV 346
Query: 341 -----------------LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
LCK G+ A E+L + + P+ + Y I CR G
Sbjct: 347 DSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLV 406
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
A M K+G++P + I+ + E+A K V K S S Y++L
Sbjct: 407 GARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILI 466
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + ++L EM NG PNV Y
Sbjct: 467 GGYGRKYEFDKCFDILKEMEDNGTMPNVVSY 497
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 113/302 (37%), Gaps = 23/302 (7%)
Query: 190 EFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKG 249
EF K DI + DN G + + + L+N CL K L I + + +G
Sbjct: 474 EFDKCFDILKEMEDN-GTMPNVVSYGTLIN-------CLC-KGSKLLEAQIVKRDMEDRG 524
Query: 250 IWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKK-TERKVSYYNILIKEMCR 308
+ V + N + C G + + +K ++KK E + YN LI +
Sbjct: 525 VSPKVRIYNMLIDGCCSKG--------KIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSM 576
Query: 309 RCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAIT 368
DLL+E+ + G +P TYN ++ G L EEM P T
Sbjct: 577 TGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKT 636
Query: 369 YEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSA 428
Y + I + G ++ F +M L+P L + + Y + E A+
Sbjct: 637 YHLLISLCTKEG-IELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMI 692
Query: 429 DKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEH 488
+K Y+ L K ++++ EM + P Y ++K H +++
Sbjct: 693 EKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKG-HCEVKDY 751
Query: 489 MA 490
M+
Sbjct: 752 MS 753
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Query: 279 LGLYE-MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYV 337
+ LYE M + IK T + Y++LI +C + + L EM +P L YN V
Sbjct: 619 IALYEEMKRSGIKPT---LKTYHLLIS-LCTKEGIELTERLFGEM---SLKPDLLVYNGV 671
Query: 338 LGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
L +G A L ++M+ ++ D TY I+ +VGK + ++M R +
Sbjct: 672 LHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREM 731
Query: 398 QPRLATHAAFIKGYFIFYRYEDAYKY 423
+P T+ +KG+ Y AY +
Sbjct: 732 EPEADTYNIIVKGHCEVKDYMSAYVW 757
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 13/254 (5%)
Query: 234 GFLPVLISS----KALTKKGIW-RVVEVLNQVGGSCLVSGVRA---LIEMFSVLG-LYEM 284
G P L++ K L + G W + EV + + VR+ LI F G L E
Sbjct: 224 GIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEA 283
Query: 285 AKYVIKKTERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
++ + R+V+ ++ LI RR + + L EMR+ G P + Y V+G
Sbjct: 284 LRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGG 343
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
C+ G +A + +EM+ C PD +TY + C+ + A N+M +RG+ P
Sbjct: 344 FCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPD 403
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
L T I GY E A ++ +D+ + Y+ L + + A +
Sbjct: 404 LCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWD 463
Query: 461 EMMKNGLRPNVSVY 474
+M + PN Y
Sbjct: 464 DMHSREIFPNHVTY 477
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 56/113 (49%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ LI CR + + + P +TYN ++ +C+ G A EL ++M
Sbjct: 407 FTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMH 466
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
R P+ +TY I I C G+ D AF F ++MV +G+ P + T+ + IKGY
Sbjct: 467 SREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGY 519
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 77/176 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI MCR+ D +L +M P +TY+ ++ C+ GQ +A L+EM+
Sbjct: 442 YNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMV 501
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+ +TY I CR G F +M + P L T+ I GY +
Sbjct: 502 NKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMH 561
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+A+ + + ++ + Y+++ S + N A V +M G+ P+ Y
Sbjct: 562 EAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTY 617
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 81/183 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN L+ +C+ +LL EM++ G P T+ ++ C++G A + +
Sbjct: 369 VVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFD 428
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ + PD +TY I CR G A ++ M R + P T++ I +
Sbjct: 429 TISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKG 488
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ ++A+ ++ +K + M Y+ + + ++ N + L +M + + P++ Y
Sbjct: 489 QVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYN 548
Query: 476 RVL 478
++
Sbjct: 549 TLI 551
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 87/199 (43%), Gaps = 5/199 (2%)
Query: 288 VIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLC 342
VI + E++ V +N+++ R D + L+ M G +P +TYN VL L
Sbjct: 181 VISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLL 240
Query: 343 KNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLA 402
+NG+ A E+ M PD ++ + I CR G+ + A F+ +M R + P +
Sbjct: 241 RNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVV 300
Query: 403 THAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM 462
+ + I + + A +Y+ + ++Y+++ + + A V EM
Sbjct: 301 SFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEM 360
Query: 463 MKNGLRPNVSVYRRVLKHL 481
+ G P+V Y +L L
Sbjct: 361 VAFGCLPDVVTYNTLLNGL 379
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 55/115 (47%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +IK CR + + L +MR P +TYN ++ K G+ +A LL+ M
Sbjct: 512 YNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIME 571
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
N PDA+TY + I G A + +M RG++P T+ + I G+ +
Sbjct: 572 NENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVV 626
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 75/179 (41%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
NI++ C+ F ++ EM + P +T+N ++ + G A L++ M+
Sbjct: 163 NIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMVS 222
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
+ P +TY + R G++D A F M G+ P + + I G+ E+
Sbjct: 223 KGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEE 282
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A ++ + + + +S L L + A L EM + GL P+ +Y V+
Sbjct: 283 ALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVI 341
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%)
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN 390
T T N ++ CK Q + ++ EM R PD +T+ + + R G + A +
Sbjct: 159 TYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALID 218
Query: 391 QMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
MV +G++P L T+ + +KG R++ A
Sbjct: 219 SMVSKGIKPGLVTYNSVLKGLLRNGRWDKA 248
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 43/101 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI + +LL M +P +TYN ++ +G +A + ++M
Sbjct: 547 YNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMG 606
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
R PD TY I G +F ++M+++GL P
Sbjct: 607 ARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAP 647
>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Glycine max]
Length = 545
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 9/188 (4%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YNI+I +C+ + +L EM Q P T+TYN ++ LCK+G+ + A +L++
Sbjct: 335 VWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLID 394
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT-----HAAFIKG 410
EM R H + ITY I C+ G+ D A N+M +G+QP + T H KG
Sbjct: 395 EMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKG 454
Query: 411 YFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
R ++A DK + Y+++ H K A + S+M +G PN
Sbjct: 455 ----KRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPN 510
Query: 471 VSVYRRVL 478
++ ++
Sbjct: 511 AITFKIII 518
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 92/212 (43%), Gaps = 5/212 (2%)
Query: 272 LIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI F LG +A V+ K + LIK +C + K ++ G
Sbjct: 104 LINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQG 163
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
++Y ++ +CK G+ A +LL + GR P+ + Y I C+ A
Sbjct: 164 FRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEAC 223
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
N F++M +G+ + T++A I G+ I + +A ++ K + +Y+ L
Sbjct: 224 NLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDAL 283
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
K AKNVL+ ++K L+PNV Y ++
Sbjct: 284 HKEGKVKEAKNVLAVIVKTCLKPNVITYNTLI 315
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 100/227 (44%), Gaps = 14/227 (6%)
Query: 257 LNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPR 316
L+QV L++GV + E + + L + + + TE V YN +I +C+R
Sbjct: 166 LDQVSYGTLINGVCKIGETRAAIQL--LRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEAC 223
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
+L EM G +TY+ ++ C G+ +A L EM+ + +PD Y +
Sbjct: 224 NLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDAL 283
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY--FIFYRYEDAYKYVVLSADKYKSS 434
+ GK A N +VK L+P + T+ I GY +F +A + ++ D + S
Sbjct: 284 HKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVF----NAVGLMGVTPDVW--S 337
Query: 435 SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
N++ + L + A N+ EM + + PN Y ++ L
Sbjct: 338 YNIMINRLCKIKRVEE----ALNLYKEMHQKNMVPNTVTYNSLIDGL 380
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 69/155 (44%), Gaps = 1/155 (0%)
Query: 325 VGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
+G P +YN ++ LCK + +A L +EM +N P+ +TY I C+ G+
Sbjct: 329 MGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISY 388
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADK-YKSSSNMLYSLLA 443
A++ ++M RG + T+ + I G + + A + D+ + L LL
Sbjct: 389 AWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLH 448
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
L K A+ + +++ G PNV Y ++
Sbjct: 449 GLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIII 483
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 6/156 (3%)
Query: 251 WRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKE 305
W +++ ++ G V +LI G + A +I K + + + NIL+
Sbjct: 390 WDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHG 449
Query: 306 M-CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHP 364
+ C+ K + L ++ G P TYN ++ CK G +A L +M C P
Sbjct: 450 LLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSP 509
Query: 365 DAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
+AIT++I I G+ D A +M+ RGL R
Sbjct: 510 NAITFKIIICALLEKGETDKAEKLLCEMIARGLLKR 545
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 3/106 (2%)
Query: 308 RRCDFKGPRDLLVEMRQVGC---EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHP 364
R F+ D L + ++ C P + +N +L K L + + P
Sbjct: 37 RPPSFENVDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQP 96
Query: 365 DAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
D T I I C +G+ ++AF+ ++++K G QP T IKG
Sbjct: 97 DFFTLNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKG 142
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 68/138 (49%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
+ + + T V +N LI C++ ++L M++ C P +TYN ++ LC
Sbjct: 266 IERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCD 325
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
G+ +ACELL EM GR PD ITY I CR + + AF N MV+RG+ P +
Sbjct: 326 AGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGIS 385
Query: 404 HAAFIKGYFIFYRYEDAY 421
+ R+++A+
Sbjct: 386 YCTLAVALLKSERFDEAF 403
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 87/177 (49%), Gaps = 4/177 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI C+ D + LL EM++ G P +T++ ++ LC G + A + E +
Sbjct: 108 YNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESV 167
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C PD++ + I + C+ + A +M +RG+ P + T+ + I G YR E
Sbjct: 168 --ECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRME 225
Query: 419 DAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+A + ++ + K K N++ Y+ L + K +A ++ M+++G P+V +
Sbjct: 226 EA-RQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTF 281
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 85/194 (43%)
Query: 288 VIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQD 347
V +K + YN LI C+ L+ M Q G P +T+N ++ C+ +
Sbjct: 235 VKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKI 294
Query: 348 ADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAF 407
ACE+L M C P+ +TY + I C G+ + A ++M RG+ P + T+ +
Sbjct: 295 DKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSL 354
Query: 408 IKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
I + ++ E A++ L ++ + Y LA K+ A +L M G
Sbjct: 355 IGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGA 414
Query: 468 RPNVSVYRRVLKHL 481
PN+ + +++ L
Sbjct: 415 IPNLFTFNSLMEGL 428
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 78/163 (47%), Gaps = 3/163 (1%)
Query: 332 LTYNYVLGVLCKNGQDADACELL-EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN 390
T N +L L K + A ++ +E+LG++C + ITY I C+ G + AF
Sbjct: 70 FTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLA 129
Query: 391 QMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNN 450
+M +RG P + TH++ ++ A +Y S + S +L+++L K N
Sbjct: 130 EMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECAPDS--VLFNILVHGLCKAN 187
Query: 451 NPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
A+ ++ EM + G+ P+V Y ++ L S++ A+ L
Sbjct: 188 QLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQL 230
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 299 YNILIKEMC--RRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
+N L++ +C RR D R LL MR+VGC+P TY ++ LCK G+ DA E+L
Sbjct: 421 FNSLMEGLCCSRRLD--EARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVM 478
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
M+ P + + R GK D+A ++F+Q+V
Sbjct: 479 MVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVV 515
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
LL M G P T+N ++ LC + + +A LL M C P A TYE+ + C
Sbjct: 405 LLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLC 464
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
+ G+ D A MV G+QP +++ +
Sbjct: 465 KAGRVDDAKEVLVMMVSEGIQPLVSSSGTIV 495
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V Y L+ +C+ K RDLL M GCEP + Y+ ++ CK G+ +A E
Sbjct: 376 EPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQE 435
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+ ML P+ TY I + + D+A ++M++ P + + I G
Sbjct: 436 VFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLC 495
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
+ ++AYK +V+ +K + + + Y+ + K+ +L +M G PN
Sbjct: 496 KVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFV 555
Query: 473 VYRRVLKH 480
YR ++ H
Sbjct: 556 TYRVLINH 563
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 112/278 (40%), Gaps = 30/278 (10%)
Query: 230 EKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVI 289
EKA+ + ++S + + V +G C S V ++F EM + I
Sbjct: 204 EKAYNVIREMMSKGFIPDTSTYSKV-----IGYLCNASKVEKAFQLFQ-----EMKRNGI 253
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
V Y LI C+ + R+ EM + GC P +TY ++ K+ + +
Sbjct: 254 AP---DVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSK 310
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL------------ 397
A E+ E ML + C P+ +TY I C+ GK + A + M K +
Sbjct: 311 ANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVV 370
Query: 398 -----QPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNP 452
+P + T+ A + G Y+ ++A + + + ++++Y L K
Sbjct: 371 DGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKL 430
Query: 453 VMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
A+ V + M++ G PNV Y ++ L + +A
Sbjct: 431 DEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLA 468
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 80/192 (41%), Gaps = 13/192 (6%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE-LLEEM 357
Y +I +C F+ D L MR C P LTY +L C N + C+ +L M
Sbjct: 45 YTKMISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRILL-CGCLNKEKLGRCKRILSMM 103
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
+ C+P + + CR G + A+ +MV+ G QP + I G
Sbjct: 104 ITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGG---ICSS 160
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM--------AKNVLSEMMKNGLRP 469
E+ K V+ A+K +L ++ N + + A NV+ EMM G P
Sbjct: 161 EEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIP 220
Query: 470 NVSVYRRVLKHL 481
+ S Y +V+ +L
Sbjct: 221 DTSTYSKVIGYL 232
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 76/174 (43%), Gaps = 1/174 (0%)
Query: 306 MCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPD 365
+C F+ +++ EM G P T TY+ V+G LC + A +L +EM PD
Sbjct: 197 LCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPD 256
Query: 366 AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV 425
Y I C+ G + A N+F++M + G P + T+ A I Y + A +
Sbjct: 257 VYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYE 316
Query: 426 LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLR-PNVSVYRRVL 478
+ K + + + Y+ L K A + M K + P+V ++ RV+
Sbjct: 317 MMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVV 370
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 2/134 (1%)
Query: 279 LGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
L L ++K + V Y +I +C+ L+V M + GC P +TY ++
Sbjct: 467 LALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMI 526
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
K+G+ ELL++M + C P+ +TY + I + C G D A +M K+
Sbjct: 527 DGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEM-KQTYW 585
Query: 399 PR-LATHAAFIKGY 411
PR +A + I+G+
Sbjct: 586 PRHVAGYRKVIEGF 599
>gi|125537408|gb|EAY83896.1| hypothetical protein OsI_39118 [Oryza sativa Indica Group]
Length = 693
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 81/173 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+LI + + + L E + Y+ ++ C NG+ A+A E++ EM+
Sbjct: 273 YNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMI 332
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C PD +TY + CR+G+ D A M K +P TH A + G +
Sbjct: 333 SKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTS 392
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
+A++ + S +++ + S++ YS++ + + +V+ +M++ G P
Sbjct: 393 EAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTT 445
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 1/158 (0%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
MR+VG EP TYN ++ LC + DA E++ ML C PD I+Y + + C+ +
Sbjct: 190 MRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKR 249
Query: 382 FDVAFNFFNQMV-KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+ +M GL P T+ I G ++A +++ S K + YS
Sbjct: 250 VEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYS 309
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ N AK ++ EM+ G +P+V Y V+
Sbjct: 310 AIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVV 347
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 82/180 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ ++ C ++++ EM GC+P +TY+ V+ C+ G+ A ++++ M
Sbjct: 308 YSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMY 367
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+C P+ +T+ + C+VGK A+ N+ + P T++ + G+ + +
Sbjct: 368 KNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLK 427
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
++ VV K + + +LL K+ P AK+ + + G NV + V+
Sbjct: 428 ESCDVVVQMLQKGFFPTTVEINLLIHALCKDGKPAEAKDFMEQCQSKGCTINVVNFTTVI 487
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 2/129 (1%)
Query: 295 KVSYYNILIKEMCRRCDFKGPRDLLVEMR-QVGCEPITLTYNYVLGVLCKNGQDADACEL 353
K+SYY ++ +C+ + R LL MR G P +TYN ++ L K+G +A E
Sbjct: 234 KISYYTVM-SFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEF 292
Query: 354 LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
L E G+ D + Y + C G+ A +M+ +G QP + T++ + G+
Sbjct: 293 LRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCR 352
Query: 414 FYRYEDAYK 422
+ A K
Sbjct: 353 IGELDQARK 361
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 5/137 (3%)
Query: 268 GVRALIEMFSVLGLYEMAKYVI-----KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
G A++ F + G AK ++ K + V Y+ ++ CR + R ++ M
Sbjct: 307 GYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHM 366
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
+ C+P T+T+ +L LCK G+ ++A ELL + P ITY + + R GK
Sbjct: 367 YKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKL 426
Query: 383 DVAFNFFNQMVKRGLQP 399
+ + QM+++G P
Sbjct: 427 KESCDVVVQMLQKGFFP 443
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 106/256 (41%), Gaps = 11/256 (4%)
Query: 235 FLPVLIS-SKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTE 293
F +++S S+A + RV+ ++ + G + +S + + V G + A ++
Sbjct: 132 FAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMR 191
Query: 294 R-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
R V YN LIK +C +++ M Q GC P ++Y V+ LCK +
Sbjct: 192 RVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVE 251
Query: 349 DACELLEEMLGRN---CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
+ LL+ M RN PD +TY + I + G D A F + + + ++
Sbjct: 252 EVRGLLQRM--RNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYS 309
Query: 406 AFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKN 465
A + + + R +A + V K + YS + + A+ ++ M KN
Sbjct: 310 AIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKN 369
Query: 466 GLRPNVSVYRRVLKHL 481
+PN + +L L
Sbjct: 370 DCKPNTVTHTALLNGL 385
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 47/94 (50%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y++++ R K D++V+M Q G P T+ N ++ LCK+G+ A+A + +E+
Sbjct: 413 YSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDGKPAEAKDFMEQCQ 472
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
+ C + + + I R G + A + + M
Sbjct: 473 SKGCTINVVNFTTVIHGFSRQGDLESALSLMDDM 506
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 2/207 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI CR + LL E+R +TYN ++ LC+ G A +L E+M+
Sbjct: 380 YNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMI 439
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R HPD +TY + + +C++G +A FF++M+ GL P + A I G
Sbjct: 440 NRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTA 499
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A+K K + Y++ + K N A +L +M+++G P+ Y +
Sbjct: 500 KAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFM 559
Query: 479 KHLHTSHQEHMAKCLSSRYSSLSLGSS 505
H H + H+ + Y LS G +
Sbjct: 560 -HAHMENG-HLREGREIFYDMLSRGQT 584
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 92/200 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN+ + +C+ + + +LL +M + G P +TY + +NG + E+
Sbjct: 517 VITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFY 576
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML R P +TY + I G+ D A +F +M ++G+ P + T+ I G+
Sbjct: 577 DMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVR 636
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ + A K+ + +K + Y++L + + A + ++M+ +RP+ +
Sbjct: 637 KMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHG 696
Query: 476 RVLKHLHTSHQEHMAKCLSS 495
+LK L ++ + + S
Sbjct: 697 ALLKKLDKDYKVQAVQFIES 716
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 89/206 (43%), Gaps = 14/206 (6%)
Query: 275 MFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
+ L L+E + V + V+ +N ++ C+ R L +M + P ++Y
Sbjct: 323 LVEALALWE--EMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISY 380
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N ++ C+ G +A LL+E+ RN + +TY I CR+G + A M+
Sbjct: 381 NTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMIN 440
Query: 395 RGLQPRLATHAAFIKG------YFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
RG+ P + T+ + G + + D +V L+ D++ ++ ++ L K
Sbjct: 441 RGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGEL------K 494
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ A + EM+ G P+V Y
Sbjct: 495 LGDTAKAFKLQEEMLTKGFPPDVITY 520
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 121/260 (46%), Gaps = 29/260 (11%)
Query: 166 ILRVLNSEKVSALCFLKYMREIM--PEF----YKNSDICSLVIDNCGRLDDYETMRQLLN 219
++RVL S + L++ + ++ P F Y I +++DNC Y M ++++
Sbjct: 108 LIRVLYSIREKPTIALRFFKCVLTQPGFKTSEYAFCAILQILVDNCLMKSAYWVMERIIS 167
Query: 220 DFNVYQVC-------LNEKAFGFLPVLISSKALTK-KGIWRVVEVLNQVGGSCLVSGVRA 271
F +Y + LN + ++ ++ L K R++++L + LV
Sbjct: 168 -FEMYGIVDVLIGGYLNYQCLLVFEKMMRNRFLPDVKNCNRILKILRD--KNLLVKA--- 221
Query: 272 LIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPIT 331
+E++ ++G +Y I+ T V+ YN ++ C+ + + DL+ +M++ GC P
Sbjct: 222 -LEVYRMMG-----EYGIRPT---VTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSE 272
Query: 332 LTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQ 391
+T+N ++ L K G+ A L++EM TY I C+ G A + +
Sbjct: 273 VTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEE 332
Query: 392 MVKRGLQPRLATHAAFIKGY 411
MV RG+ P +A+H + G+
Sbjct: 333 MVTRGVSPTVASHNTIMYGF 352
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 66/154 (42%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
EM G P +TYN + LCK G +A ELL++M+ PD +TY F+ G
Sbjct: 507 EMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENG 566
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
F M+ RG P + T+ I + + R + A Y + +K + + Y+
Sbjct: 567 HLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYN 626
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+L + K A EM + G+ PN Y
Sbjct: 627 VLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTY 660
>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 874
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%)
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
C P +TY+ +L LCK G+ A+A L EM+G PD++ Y IFI + C+ GK AF
Sbjct: 520 CLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAF 579
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
M K+G L T+ + I G I + + + + +K S + Y+
Sbjct: 580 RVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYL 639
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
+ A N+L EMM+ + PNV ++ +++
Sbjct: 640 CEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIE 672
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 5/154 (3%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
+++ F +GL E AK + + + YNI ++ + R F +L +M G
Sbjct: 297 MLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKG 356
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
P +YN ++ LCK G +DA ++ M PDA+TY + C VGK D A
Sbjct: 357 IGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAK 416
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
+ +M++ P T + + R +A
Sbjct: 417 SLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEA 450
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 48/105 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N+LI+ +C R+L EM + GC+P T+ ++ CK G ELL M
Sbjct: 150 FNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAME 209
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
P+ + Y + CR G+ D + +M + GL P + T
Sbjct: 210 SFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVT 254
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 5/127 (3%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
I F G A V+K E+K + YN LI + + L+ EM++ G
Sbjct: 565 FIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKG 624
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
P TYN + LC+ + DA LL+EM+ +N P+ +++ I C+V FD+A
Sbjct: 625 ISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQ 684
Query: 387 NFFNQMV 393
F V
Sbjct: 685 EVFETAV 691
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 87/198 (43%), Gaps = 3/198 (1%)
Query: 285 AKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYN-YVLGVLCK 343
A+ + +K + YNI I C++ +L +M + GC TYN +LG+ K
Sbjct: 548 AEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIK 607
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
N Q + L++EM + P+ TY I Y C K + A N ++M+++ + P + +
Sbjct: 608 N-QIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFS 666
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
I+ + + D + V +A LYSL+ + + A +L ++
Sbjct: 667 FKYLIEAFCKVPDF-DMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVL 725
Query: 464 KNGLRPNVSVYRRVLKHL 481
G +Y+ +++ L
Sbjct: 726 DRGFELGTFLYKDLVESL 743
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 6/146 (4%)
Query: 282 YEMAKYVIKKTERKVSYYNILIKEMC---RRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
+++ + + + V YN+L+ E C RR +F L +M G P T T+N ++
Sbjct: 98 FQLVRSRFPENKPSVYLYNLLL-ESCIKERRVEFVSW--LYKDMVLCGIAPQTYTFNLLI 154
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
LC + A EL +EM + C P+ T+ I + C+ G D N M G+
Sbjct: 155 RALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVL 214
Query: 399 PRLATHAAFIKGYFIFYRYEDAYKYV 424
P + + + R +D+ K V
Sbjct: 215 PNKVIYNTIVSSFCREGRNDDSEKMV 240
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 92/230 (40%), Gaps = 28/230 (12%)
Query: 280 GLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
G + A+ V+K+ K + YNIL+ +C+ + ++ M++ G P +TY
Sbjct: 340 GKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTY 399
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
+L C G+ A LL+EM+ NC P+A T I + ++G+ A +M +
Sbjct: 400 GCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNE 459
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYK-------------------YVVLSADKYKSSS 435
+G T + G + A + Y+ L D ++
Sbjct: 460 KGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENN 519
Query: 436 NM----LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ YS L + K AKN+ +EMM L+P+ Y + H
Sbjct: 520 CLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHF 569
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 58/143 (40%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P ++TYN +L CK G DA L E + + +Y I++ R GKF A
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
QM +G+ P + ++ + G DA V L + Y L +
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCS 408
Query: 449 NNNPVMAKNVLSEMMKNGLRPNV 471
AK++L EMM+N PN
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNA 431
>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 909
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 60/112 (53%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+NILIK +C+ + DL+ ++ + G P ++Y+ ++ LCK G A EL EML
Sbjct: 783 FNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEML 842
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ PD + Y IFI + G+ D A + M++ G+QP T+ A + G
Sbjct: 843 YKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSG 894
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 2/148 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ LI +CR D +L EM + G T+ ++ CK+ + +A L ++M+
Sbjct: 469 YSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMI 528
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
N P+ +T+ + I C VG AF ++QMV+ GL+P T+ + I G +
Sbjct: 529 DSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVS 588
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLH 446
A ++V + Y +N +SL A L+
Sbjct: 589 KANEFVADLENSYAVLNN--FSLTALLY 614
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 51/112 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI ++C+ F L EM G EP +TY ++ LCK G DA L ++M
Sbjct: 364 YNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMR 423
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ Y I C+ G D A + MVK GL P A+++ I G
Sbjct: 424 DKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAG 475
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L ++ +G P YN ++ LCKN + DA L +EM GR P+ +TY I I C
Sbjct: 348 LACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALC 407
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
+ G + A F++M +G++ + + + I GY
Sbjct: 408 KRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGY 441
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 80/180 (44%), Gaps = 36/180 (20%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN + D + +DL M Q G +++N ++ LCK G+ +A +L+ ++
Sbjct: 749 YNCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMSKIT 807
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD I+Y I C++G + AF +N+M+ +GL+P + Y IF R+
Sbjct: 808 ESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVA-------YNIFIRW- 859
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
++H +++ A + + M+++G++PN YR +L
Sbjct: 860 ------------------------CNVHGESDK---ALGIYTNMIRSGVQPNWDTYRALL 892
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 76/195 (38%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y I+ C + G R L+V M G + + YN ++ LCKN + +A E+ M+
Sbjct: 224 YTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMV 283
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
D +TY + CR+ + ++A + M++ G P A + I E
Sbjct: 284 NIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVE 343
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A+ D + Y+ L KN A + EM GL PN Y ++
Sbjct: 344 EAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILI 403
Query: 479 KHLHTSHQEHMAKCL 493
L A CL
Sbjct: 404 HALCKRGMIEDALCL 418
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 76/183 (41%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ILI +C+R + L +MR G + YN ++ CK G A LL M+
Sbjct: 399 YAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMV 458
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P A +Y I CR G +M +RG+ T A I G+ + +
Sbjct: 459 KEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMD 518
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + D + + ++++ + N A + +M++ GL+P+ YR ++
Sbjct: 519 EAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLI 578
Query: 479 KHL 481
L
Sbjct: 579 SGL 581
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 7/180 (3%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
+Y +I + + + + +M G P T+T+ ++ LCK+G A L +EM
Sbjct: 678 FYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEM 737
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAF---IKGYFIF 414
L N P+ TY F+ Y G + A + + M LQ LA+ +F IKG
Sbjct: 738 LAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM----LQGHLASIVSFNILIKGLCKA 793
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ ++A + + S + YS + K + A + +EM+ GL+P+V Y
Sbjct: 794 GKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAY 853
>gi|226492629|ref|NP_001143148.1| uncharacterized protein LOC100275629 [Zea mays]
gi|195615066|gb|ACG29363.1| hypothetical protein [Zea mays]
Length = 478
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 87/183 (47%), Gaps = 2/183 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ YN+L+K C D L R + +P +YN ++ LC+ G+ A+A ++
Sbjct: 164 AATYNVLLKAHCSDAAAHI-EDALRLFRNIP-KPDVCSYNTIIDGLCRRGRLAEALDMFS 221
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM+G+ P +TY I + R G FD A F++M +RG+ P L T+++ I G
Sbjct: 222 EMVGKCIAPTVVTYTTVIHWLAREGCFDDALKIFHEMGRRGVSPNLVTYSSLIDGLCKGG 281
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R A + + + K + + YS + K + A VL M G +P+ ++
Sbjct: 282 RATSALELLDRMVKEKKLPNTITYSSVIDGLCKEHMLSEAMEVLDRMRLQGRKPDAGLFG 341
Query: 476 RVL 478
+++
Sbjct: 342 KLI 344
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 80/188 (42%), Gaps = 7/188 (3%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN +I +CRR D+ EM P +TY V+ L + G DA ++
Sbjct: 197 VCSYNTIIDGLCRRGRLAEALDMFSEMVGKCIAPTVVTYTTVIHWLAREGCFDDALKIFH 256
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM R P+ +TY I C+ G+ A ++MVK P T+++ I G +
Sbjct: 257 EMGRRGVSPNLVTYSSLIDGLCKGGRATSALELLDRMVKEKKLPNTITYSSVIDGLCKEH 316
Query: 416 RYEDAYKYV-VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+A + + + K + + L+ L D V A N L EM+ G+ PN
Sbjct: 317 MLSEAMEVLDRMRLQGRKPDAGLFGKLIVGLCDAGRA-VEAANYLDEMVLAGIEPN---- 371
Query: 475 RRVLKHLH 482
RV LH
Sbjct: 372 -RVTWSLH 378
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 80/171 (46%), Gaps = 13/171 (7%)
Query: 244 ALTKKGIWRVVEVLN---QVGGSCLVSGV---RALIEMFSVLGLYEMAKYVIKKTERK-- 295
L ++G R+ E L+ ++ G C+ V +I + G ++ A + + R+
Sbjct: 206 GLCRRG--RLAEALDMFSEMVGKCIAPTVVTYTTVIHWLAREGCFDDALKIFHEMGRRGV 263
Query: 296 ---VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
+ Y+ LI +C+ +LL M + P T+TY+ V+ LCK ++A E
Sbjct: 264 SPNLVTYSSLIDGLCKGGRATSALELLDRMVKEKKLPNTITYSSVIDGLCKEHMLSEAME 323
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
+L+ M + PDA + IV C G+ A N+ ++MV G++P T
Sbjct: 324 VLDRMRLQGRKPDAGLFGKLIVGLCDAGRAVEAANYLDEMVLAGIEPNRVT 374
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 5/203 (2%)
Query: 276 FSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYN 335
FSVLG Y + + + LI+ +C L +M G +P LTY
Sbjct: 109 FSVLGDILKLGY-----QPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYG 163
Query: 336 YVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR 395
++ LCK G + A L M RNC P + Y I C+ + A + F+ M+ +
Sbjct: 164 TLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAK 223
Query: 396 GLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMA 455
G+ P T+++ I G I +++A + + + ++ L K V A
Sbjct: 224 GISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKA 283
Query: 456 KNVLSEMMKNGLRPNVSVYRRVL 478
V+ M+++ L+P+V Y ++
Sbjct: 284 HYVVDVMIQSDLKPDVVTYNSLM 306
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 82/183 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C + L EM G P +TY + LCKN + A+A LL+ +
Sbjct: 372 YNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIE 431
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
G N PD Y I + CR G+ + A + F+++ +GL P + T+ I G
Sbjct: 432 GTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLA 491
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A K + S + Y+L+ +NN + A + EM+ G +VS ++
Sbjct: 492 EASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLV 551
Query: 479 KHL 481
+ L
Sbjct: 552 EML 554
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 87/216 (40%), Gaps = 5/216 (2%)
Query: 271 ALIEMFSVLGLYEMAKYVIK-----KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
L++ G+ A YV+ + V YN L+ C R + ++ M +
Sbjct: 269 TLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRK 328
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
GC P ++Y ++ CK A L EEM + PD +TY I C VG+ A
Sbjct: 329 GCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDA 388
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
F++MV G P L T+ +R +A + + +YS++
Sbjct: 389 IALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDG 448
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ A+++ S++ GL P+V Y ++ L
Sbjct: 449 MCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGL 484
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 100/247 (40%), Gaps = 13/247 (5%)
Query: 271 ALIEMFSVLGLY-EMAKYVIKKTERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQV 325
+LI +LG + E + RK+ +N L+ +C+ ++ M Q
Sbjct: 234 SLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQS 293
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
+P +TYN ++ C + + + M+ + C P I+Y I C++ D A
Sbjct: 294 DLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKA 353
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA----YKYVVLSADKYKSSSNMLYSL 441
F +M ++GL P T+ I G R DA ++ VV + +L+
Sbjct: 354 MGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDY 413
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLS 501
L KN+ A +L + L P++ +Y V+ + + + A+ L S+ SS
Sbjct: 414 LC----KNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKG 469
Query: 502 LGSSVEA 508
L V
Sbjct: 470 LHPDVRT 476
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 2/124 (1%)
Query: 288 VIKKT--ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNG 345
VI+ T + + Y+I++ MCR + + RDL ++ G P TY ++ LC+ G
Sbjct: 429 VIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQG 488
Query: 346 QDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
A+A +L EM C P+A TY + R + A F +M+ RG ++T
Sbjct: 489 LLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTT 548
Query: 406 AFIK 409
++
Sbjct: 549 LLVE 552
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 51/113 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ LI +C +K L M P LT+N ++ LCK G A +++ M+
Sbjct: 232 YSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMI 291
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
+ PD +TY + C + N F+ MV++G P + ++ I GY
Sbjct: 292 QSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGY 344
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 74/186 (39%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ +I +C+ L +M G P TY+ ++ LC G +A L
Sbjct: 194 VVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFY 253
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+ R PD +T+ + C+ G A + M++ L+P + T+ + + G+ +
Sbjct: 254 AMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRS 313
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
K S + Y+ L + + K A + EM + GL P+ Y
Sbjct: 314 EMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYN 373
Query: 476 RVLKHL 481
++ L
Sbjct: 374 TLIHGL 379
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 64/161 (39%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M G T T N ++ C + A +L ++L P T+ I C G
Sbjct: 79 QMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEG 138
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
K A F++M G QP + T+ I G A +++ + + ++YS
Sbjct: 139 KIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYS 198
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ K+ A ++ S+M+ G+ PN Y ++ L
Sbjct: 199 TIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGL 239
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 92/185 (49%), Gaps = 4/185 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDL--LVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
+NI+I C C F+ L L +M ++G EP +T ++ C+ + +DA L+++
Sbjct: 123 FNIVINCFC--CCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
M+ PD + Y I C+ + + A +FF ++ ++G++P + T+ A + G R
Sbjct: 181 MVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGR 240
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
+ DA + + + + + + YS L KN + AK + EM++ + P++ Y
Sbjct: 241 WNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSS 300
Query: 477 VLKHL 481
++ L
Sbjct: 301 LINGL 305
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 87/208 (41%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I +C+ D E+ + G P +TY ++ LC +G+ DA LL +M+
Sbjct: 193 YNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMI 252
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R P+ ITY + + GK A F +MV+ + P + T+++ I G + R +
Sbjct: 253 KRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRID 312
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + L K + Y+ L + K + +M + GL N Y ++
Sbjct: 313 EANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLI 372
Query: 479 KHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
+ A+ S+ S + +
Sbjct: 373 QGFFQVGDVDKAQEFFSQMDSFGVSPDI 400
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 52/112 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI+ + D ++ +M G P TYN +LG LC NG A + E+M
Sbjct: 368 YNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQ 427
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
D +TY I C+ GK + A+ F + +GL+P + T+ + G
Sbjct: 428 KSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSG 479
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 97/214 (45%), Gaps = 5/214 (2%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
+K V Y+ L+ + +++ EM ++ +P +TY+ ++ LC + + +
Sbjct: 254 RKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDE 313
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A ++ + M+ + C PD ++Y I C+ + + F +M +RGL T+ I+
Sbjct: 314 ANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQ 373
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLR 468
G+F + A ++ D + S ++ Y++L N A + +M K+ +
Sbjct: 374 GFFQVGDVDKAQEFFS-QMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMD 432
Query: 469 PNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSL 502
++ Y V++ + + + A L + SLSL
Sbjct: 433 LDIVTYTTVIQGMCKTGKVEDAWGL---FCSLSL 463
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 97/240 (40%), Gaps = 11/240 (4%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
AL++ F G AK + ++ R + Y+ LI +C + M
Sbjct: 265 ALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
GC P ++YN ++ CK + D +L +M R + +TY I +VG D A
Sbjct: 325 GCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKA 384
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM---LYSLL 442
FF+QM G+ P + T+ + G E K +V+ D KS ++ Y+ +
Sbjct: 385 QEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLE---KALVIFEDMQKSEMDLDIVTYTTV 441
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSL 502
K A + + GL+P++ Y ++ L T +H + L ++ L
Sbjct: 442 IQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGL 501
>gi|255660904|gb|ACU25621.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 484
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 1/188 (0%)
Query: 292 TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADAC 351
ER + YN L K + RR + + +M G EP T+N ++ +G+ A
Sbjct: 111 VERTIKSYNALFKAILRRGRYMMAKRYFNKMLSEGIEPARHTFNVMIWGFFLSGKVETAN 170
Query: 352 ELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
E+M R PD +TY I RV K + A +F +M R ++P + T+ IKGY
Sbjct: 171 RFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230
Query: 412 FIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP-N 470
+ +DA + V + + YS L + A+++L EMM L P +
Sbjct: 231 VSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAGKMIEARSILKEMMDKYLAPTD 290
Query: 471 VSVYRRVL 478
S++ R++
Sbjct: 291 NSIFMRLI 298
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 70/164 (42%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
+ +M ++G E +YN + + + G+ A +ML P T+ + I
Sbjct: 102 MFQKMEELGVERTIKSYNALFKAILRRGRYMMAKRYFNKMLSEGIEPARHTFNVMIWGFF 161
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
GK + A FF M R + P + T+ I GY+ + E+A KY V + + +
Sbjct: 162 LSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVV 221
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y+ L + + A ++ EM G++PN Y +L L
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGL 265
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 100/235 (42%), Gaps = 16/235 (6%)
Query: 258 NQVGGSCLVSGV---RALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKG 314
N + S L+ G+ +IE S+L EM + T+ S + LI C +
Sbjct: 254 NAITYSTLLPGLCNAGKMIEARSILK--EMMDKYLAPTDN--SIFMRLISSQCNSGNLDA 309
Query: 315 PRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNC--------HPDA 366
D+L M ++ Y ++ CK GQ A +LL++++ ++ H +
Sbjct: 310 AADVLKAMIRLSVPTEAGHYGVLIENFCKAGQYDQAVKLLDKLIEKDIILRPQSTLHLEP 369
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
Y I Y C G+ A Q++K G+Q A + I+G+ + A++ + +
Sbjct: 370 SAYNPMIEYLCNNGQAAKAEALVRQLLKLGVQDPTALN-TLIRGHSQEGSPDSAFELLKI 428
Query: 427 SADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ S Y L + K N P AK L M++N P+ S++R V++ L
Sbjct: 429 MLRRKVDSEKSAYDSLVQSYLKKNEPADAKAALDSMIENDHLPDSSLFRSVMESL 483
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 34/178 (19%), Positives = 75/178 (42%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
+I+ + R R +L++M + G E + ++ K G ++ ++ ++M
Sbjct: 51 IIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELG 110
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
+Y R G++ +A +FN+M+ G++P T I G+F+ + E A
Sbjct: 111 VERTIKSYNALFKAILRRGRYMMAKRYFNKMLSEGIEPARHTFNVMIWGFFLSGKVETAN 170
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
++ + S + Y+ + + + + A+ EM + P V Y ++K
Sbjct: 171 RFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIK 228
>gi|296081889|emb|CBI20894.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 108/264 (40%), Gaps = 43/264 (16%)
Query: 257 LNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIK------KTERKVSYYNILIKEMCRRC 310
+ + G S LI+ + + G E ++ +++ + YN+L++ C +
Sbjct: 168 MKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQDENVRPNLRTYNVLVRAWCNKK 227
Query: 311 DFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYE 370
+ +++ +M G +P +TYN + +NG+ + A ++ EM N P+ T
Sbjct: 228 NIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCC 287
Query: 371 IFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADK 430
I I C+ GK A F +M GLQP L + IKG FI D V+ ++
Sbjct: 288 IIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKG-FIDAVDRDGVNEVLTLMEE 346
Query: 431 YKSSSNML------------------------------------YSLLASLHDKNNNPVM 454
+ +++ YS+LA + + P
Sbjct: 347 FGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAKGYVRAGEPEK 406
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVL 478
A+ +L+ M+K+G PNV ++ ++
Sbjct: 407 AEEILNAMIKSGFHPNVVIFTTII 430
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 2/125 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADAC-ELLEEM 357
+N LIK D G ++L M + G +P +T++ ++ G D C E+ ++M
Sbjct: 321 FNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAG-FMDKCREIFDDM 379
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
+ PDA Y I R G+ + A N M+K G P + I G+ R
Sbjct: 380 VKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRM 439
Query: 418 EDAYK 422
E A K
Sbjct: 440 EYAIK 444
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 83/195 (42%), Gaps = 5/195 (2%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
++K + + NI+I E R + + D ++E G +P +TY +L L
Sbjct: 64 LSKTSCRTVRSRTKLMNIMI-EKGRPQEVQSILDSIIEG---GHKPSLVTYTTLLAALTI 119
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
++ ++ PD+I + I G A +F +M + G +P +T
Sbjct: 120 QKHFDSIHSIISQVEENGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTST 179
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM-LYSLLASLHDKNNNPVMAKNVLSEM 462
IKGY I E++ K + L + N+ Y++L N + A NV+ +M
Sbjct: 180 FNTLIKGYGIAGEPEESQKLLELMSQDENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKM 239
Query: 463 MKNGLRPNVSVYRRV 477
+ +GL+P+ Y +
Sbjct: 240 VASGLQPDAVTYNTI 254
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 43/96 (44%)
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
R++ +M + +P Y+ + + G+ A E+L M+ HP+ + + I
Sbjct: 373 REIFDDMVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVIFTTIING 432
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
C G+ + A F +M + G+ P L T I GY
Sbjct: 433 WCSAGRMEYAIKIFEKMCECGIAPNLKTFETLIWGY 468
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 116/276 (42%), Gaps = 13/276 (4%)
Query: 231 KAFGFLPVLISSKALT----KKGIWRVVEVL----NQVGGSCLVSGVRALIEMFSVLGLY 282
KA G P +++ +L K G VE+L + G + V ALI FS G
Sbjct: 226 KAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWI 285
Query: 283 EMAKYVIKKTERKVSYYNIL-----IKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYV 337
E A + +R N++ + C+ + L +MR G P TY +
Sbjct: 286 EKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSL 345
Query: 338 LGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
+ CK G+ DA LL+EM+ + P+ +TY + + C+ GK VA + + M + G+
Sbjct: 346 VDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGV 405
Query: 398 QPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKN 457
+ + I G+F+ E A + +K LY L K AK+
Sbjct: 406 KANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKS 465
Query: 458 VLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
+L +M GLRPN +Y ++ + +E A L
Sbjct: 466 LLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVAL 501
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 83/185 (44%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K E VS Y LI +C+ + LL +M G P T+ Y ++ K G++++
Sbjct: 438 KGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESE 497
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A LL ++ P+ +TY I C+ G A + F++M + GL P + + I
Sbjct: 498 AVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLID 557
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
G+ A + DK S ++Y+ L H K + A + ++M++ GL+
Sbjct: 558 GFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQL 617
Query: 470 NVSVY 474
++ Y
Sbjct: 618 DLYCY 622
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +NI+I +C++ + R L V M+ +GC P +TYN ++ K G+ + L+
Sbjct: 199 VFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVS 258
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM C D +TY I + G + A+++F +M + G+ + T + F+ +
Sbjct: 259 EMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEG 318
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+A K + + Y+ L K A +L EM+ GL PNV Y
Sbjct: 319 LVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTY 377
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 68/179 (37%), Gaps = 35/179 (19%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y LI +C+ +MR++G +P Y ++ CK G + A L+
Sbjct: 514 VVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMN 573
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM+ + D + Y I + G AF +M++ GLQ L + FI G+
Sbjct: 574 EMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGF---- 629
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ NM+ A+ VLSEM+ G+ P+ + Y
Sbjct: 630 -----------------CNMNMMQE--------------ARGVLSEMIGTGITPDKTAY 657
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 42/95 (44%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P T+N V+ LCK G+ +A L M C PD +TY I + G+ +
Sbjct: 197 PNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELL 256
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY 423
++M K G + T+ A I + F E AY Y
Sbjct: 257 VSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSY 291
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Query: 319 LVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCR 378
L +RQ+ P T T N++L L +N Q L E + P+ T+ I I + C+
Sbjct: 156 LARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFEHLPA----PNVFTFNIVIDFLCK 211
Query: 379 VGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
G+ A F +M G P + T+ + I GY
Sbjct: 212 QGELVEARALFVRMKAMGCSPDVVTYNSLIDGY 244
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
DLL EM+ G E Y ++ LCK + +A LL +M P+ + Y +
Sbjct: 430 DLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAF 489
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ GK A +++ GLQP + T+ A I G
Sbjct: 490 FKAGKESEAVALLHKIPDSGLQPNVVTYCALIDG 523
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 86/185 (46%), Gaps = 4/185 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ +C C++K LL +M P + ++ V+ LCK G+ +A E+++ M+
Sbjct: 234 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 293
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R PD +TY + C + D A F+ MV++G P + ++ I GY ++ +
Sbjct: 294 QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKID 353
Query: 419 DA-YKYVVLSADKYKSSSNMLYSLLASL-HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
A Y + + ++ + +L+ L H +A + EM+ G P++ Y
Sbjct: 354 KAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIA--LFHEMVARGQMPDLVTYSI 411
Query: 477 VLKHL 481
+L L
Sbjct: 412 LLDSL 416
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 102/235 (43%), Gaps = 5/235 (2%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEM 306
+V +++ + G + V LI + + + A Y+ ++ RK YN L+ +
Sbjct: 322 KVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGL 381
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
C + L EM G P +TY+ +L LCKN +A LL+ + N +PD
Sbjct: 382 CHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDI 441
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
Y I I CR G+ + A + F+ + +GL P + T+ I G +A K +
Sbjct: 442 QVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFME 501
Query: 427 SADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
S Y+ +A +NN + A +L EM+ G +VS +++ L
Sbjct: 502 MDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEML 556
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 5/203 (2%)
Query: 276 FSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYN 335
FSVL AK + + + + LI+ +C L +M G +P +TY
Sbjct: 111 FSVL-----AKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYG 165
Query: 336 YVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR 395
++ LCK G + A LL M NC PD + Y I C+ + AFN F+QMV +
Sbjct: 166 TLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQ 225
Query: 396 GLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMA 455
G+ P + T+ + + ++ + + +++S + K A
Sbjct: 226 GISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEA 285
Query: 456 KNVLSEMMKNGLRPNVSVYRRVL 478
++ M++ G+ P+V Y ++
Sbjct: 286 HEIVDMMIQRGVEPDVVTYTTLM 308
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 82/199 (41%)
Query: 280 GLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
L+ K + + + V Y LI +C+ + LL M Q C+P + Y ++
Sbjct: 145 ALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIID 204
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
LCK+ Q +A L +M+G+ PD TY + C + ++ NQMV + P
Sbjct: 205 SLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILP 264
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
+ + + + +A++ V + + + Y+ L H + A V
Sbjct: 265 DVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVF 324
Query: 460 SEMMKNGLRPNVSVYRRVL 478
M++ G P+V Y ++
Sbjct: 325 DMMVRKGFAPDVISYTTLI 343
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 92/211 (43%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V ++ ++ +C+ +++ M Q G EP +TY ++ C + +A ++ +
Sbjct: 266 VVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFD 325
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+ + PD I+Y I C++ K D A F +M ++ P T+ + G
Sbjct: 326 MMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVG 385
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R +DA + + + YS+L KN + A +L + + L P++ VY
Sbjct: 386 RLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYN 445
Query: 476 RVLKHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
++ + + + A+ L S SS L SV
Sbjct: 446 IIIDGMCRAGELEAARDLFSNLSSKGLHPSV 476
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 119/285 (41%), Gaps = 26/285 (9%)
Query: 215 RQLLNDFNVYQVCLNEKAFGFLPVLIS----SKALTKKGIWR-VVEVLNQVGGSCLV--- 266
RQ+ FN++ + + G P + + AL W+ V +LNQ+ S ++
Sbjct: 210 RQVTEAFNLFSQMVGQ---GISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDV 266
Query: 267 ----SGVRALIEMFSVLGLYEMAKYVIKK-TERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
+ V AL + V +E+ +I++ E V Y L+ C + + +
Sbjct: 267 VIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDM 326
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M + G P ++Y ++ CK + A L EEM + PD TY + C VG+
Sbjct: 327 MVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGR 386
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM---- 437
A F++MV RG P L T++ + E+A + K +SN+
Sbjct: 387 LQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALL-----KAIEASNLNPDI 441
Query: 438 -LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+Y+++ + A+++ S + GL P+V Y ++ L
Sbjct: 442 QVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGL 486
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 66/164 (40%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L +M G P T N ++ C + A +L ++L PD T+ I C
Sbjct: 78 LSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLC 137
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
GK A + F++M+ G QP + T+ I G A + + +
Sbjct: 138 VEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVV 197
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+Y+ + K+ A N+ S+M+ G+ P++ Y ++ L
Sbjct: 198 IYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHAL 241
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 15/168 (8%)
Query: 206 GRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCL 265
G++ D T LL+ ++ + C E+A L + +S ++ ++ + G C
Sbjct: 401 GQMPDLVTYSILLD--SLCKNCHLEEAMALLKAIEASNLNPDIQVYNII-----IDGMCR 453
Query: 266 VSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
+ A ++FS L K V YNI+I +C+R L +EM
Sbjct: 454 AGELEAARDLFSNLS--------SKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGN 505
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFI 373
C P TYN + +N + A +LLEEML R D T + +
Sbjct: 506 DCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLV 553
>gi|255660978|gb|ACU25658.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 373
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 88/187 (47%), Gaps = 2/187 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI + F+ + EM + C P +TYN ++ LCKN +A L++
Sbjct: 164 VHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVK 223
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
E+L + P ITY + + C + A +NQ+ +G +P + H I G
Sbjct: 224 ELLDKGLDPGVITYSMLMXGLCLDHXVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVG 283
Query: 416 RYEDAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + A + +++K + N++ ++ L K+ + A + + +++NGL P++ Y
Sbjct: 284 KMQLALS-LXFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISY 342
Query: 475 RRVLKHL 481
L+ L
Sbjct: 343 NITLEGL 349
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 95/226 (42%)
Query: 282 YEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+E+ + + + R VS +N +++ + + M++ G ++TY ++
Sbjct: 45 FELWEMMGSEGNRSVSSFNXMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGF 104
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
CKNG + +LE + DA Y I C+ D A + N M+K G +P +
Sbjct: 105 CKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNV 164
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
+ I G ++EDA + + S + + Y+ L + KN A N++ E
Sbjct: 165 HVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVKE 224
Query: 462 MMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSVE 507
++ GL P V Y ++ L H A L ++ +S V+
Sbjct: 225 LLDKGLDPGVITYSMLMXGLCLDHXVERALQLWNQVTSKGFKPDVQ 270
>gi|125580078|gb|EAZ21224.1| hypothetical protein OsJ_36877 [Oryza sativa Japonica Group]
Length = 726
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 81/173 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+LI + + + L E + Y+ ++ C NG+ A+A E++ EM+
Sbjct: 306 YNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMI 365
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C PD +TY + CR+G+ D A M K +P TH A + G +
Sbjct: 366 SKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTS 425
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
+A++ + S +++ + S++ YS++ + + +V+ +M++ G P
Sbjct: 426 EAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTT 478
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 1/158 (0%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
MR+VG EP TYN ++ LC + DA E++ ML C PD I+Y + + C+ +
Sbjct: 223 MRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKR 282
Query: 382 FDVAFNFFNQMV-KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+ +M GL P T+ I G ++A +++ S K + YS
Sbjct: 283 VEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYS 342
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ N AK ++ EM+ G +P+V Y V+
Sbjct: 343 AIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVV 380
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 82/180 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ ++ C ++++ EM GC+P +TY+ V+ C+ G+ A ++++ M
Sbjct: 341 YSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMY 400
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+C P+ +T+ + C+VGK A+ N+ + P T++ + G+ + +
Sbjct: 401 KNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLK 460
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
++ VV K + + +LL K+ P AK+ + + G NV + V+
Sbjct: 461 ESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVI 520
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 2/129 (1%)
Query: 295 KVSYYNILIKEMCRRCDFKGPRDLLVEMR-QVGCEPITLTYNYVLGVLCKNGQDADACEL 353
K+SYY ++ +C+ + R LL MR G P +TYN ++ L K+G +A E
Sbjct: 267 KISYYTVM-SFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEF 325
Query: 354 LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
L E G+ D + Y + C G+ A +M+ +G QP + T++ + G+
Sbjct: 326 LRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCR 385
Query: 414 FYRYEDAYK 422
+ A K
Sbjct: 386 IGELDQARK 394
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 5/137 (3%)
Query: 268 GVRALIEMFSVLGLYEMAKYVI-----KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
G A++ F + G AK ++ K + V Y+ ++ CR + R ++ M
Sbjct: 340 GYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHM 399
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
+ C+P T+T+ +L LCK G+ ++A ELL + P ITY + + R GK
Sbjct: 400 YKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKL 459
Query: 383 DVAFNFFNQMVKRGLQP 399
+ + QM+++G P
Sbjct: 460 KESCDVVVQMLQKGFFP 476
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 106/256 (41%), Gaps = 11/256 (4%)
Query: 235 FLPVLIS-SKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTE 293
F +++S S+A + RV+ ++ + G + +S + + V G + A ++
Sbjct: 165 FAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMR 224
Query: 294 R-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
R V YN LIK +C +++ M Q GC P ++Y V+ LCK +
Sbjct: 225 RVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVE 284
Query: 349 DACELLEEMLGRN---CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
+ LL+ M RN PD +TY + I + G D A F + + + ++
Sbjct: 285 EVRGLLQRM--RNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYS 342
Query: 406 AFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKN 465
A + + + R +A + V K + YS + + A+ ++ M KN
Sbjct: 343 AIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKN 402
Query: 466 GLRPNVSVYRRVLKHL 481
+PN + +L L
Sbjct: 403 DCKPNTVTHTALLNGL 418
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 46/94 (48%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y++++ R K D++V+M Q G P T+ N ++ LCK+ + A+A + +E+
Sbjct: 446 YSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQ 505
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
+ C + + + I R G + A + + M
Sbjct: 506 SKGCTINVVNFTTVIHGFSRQGDLESALSLMDDM 539
>gi|77557056|gb|ABA99852.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 726
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 81/173 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+LI + + + L E + Y+ ++ C NG+ A+A E++ EM+
Sbjct: 306 YNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMI 365
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C PD +TY + CR+G+ D A M K +P TH A + G +
Sbjct: 366 SKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTS 425
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
+A++ + S +++ + S++ YS++ + + +V+ +M++ G P
Sbjct: 426 EAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTT 478
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 1/158 (0%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
MR+VG EP TYN ++ LC + DA E++ ML C PD I+Y + + C+ +
Sbjct: 223 MRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKR 282
Query: 382 FDVAFNFFNQMV-KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+ +M GL P T+ I G ++A +++ S K + YS
Sbjct: 283 VEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYS 342
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ N AK ++ EM+ G +P+V Y V+
Sbjct: 343 AIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVV 380
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 82/180 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ ++ C ++++ EM GC+P +TY+ V+ C+ G+ A ++++ M
Sbjct: 341 YSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMY 400
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+C P+ +T+ + C+VGK A+ N+ + P T++ + G+ + +
Sbjct: 401 KNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLK 460
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
++ VV K + + +LL K+ P AK+ + + G NV + V+
Sbjct: 461 ESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVI 520
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 2/129 (1%)
Query: 295 KVSYYNILIKEMCRRCDFKGPRDLLVEMR-QVGCEPITLTYNYVLGVLCKNGQDADACEL 353
K+SYY ++ +C+ + R LL MR G P +TYN ++ L K+G +A E
Sbjct: 267 KISYYTVM-SFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEF 325
Query: 354 LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
L E G+ D + Y + C G+ A +M+ +G QP + T++ + G+
Sbjct: 326 LRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCR 385
Query: 414 FYRYEDAYK 422
+ A K
Sbjct: 386 IGELDQARK 394
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 5/137 (3%)
Query: 268 GVRALIEMFSVLGLYEMAKYVI-----KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
G A++ F + G AK ++ K + V Y+ ++ CR + R ++ M
Sbjct: 340 GYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHM 399
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
+ C+P T+T+ +L LCK G+ ++A ELL + P ITY + + R GK
Sbjct: 400 YKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKL 459
Query: 383 DVAFNFFNQMVKRGLQP 399
+ + QM+++G P
Sbjct: 460 KESCDVVVQMLQKGFFP 476
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 106/256 (41%), Gaps = 11/256 (4%)
Query: 235 FLPVLIS-SKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTE 293
F +++S S+A + RV+ ++ + G + +S + + V G + A ++
Sbjct: 165 FAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMR 224
Query: 294 R-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
R V YN LIK +C +++ M Q GC P ++Y V+ LCK +
Sbjct: 225 RVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVE 284
Query: 349 DACELLEEMLGRN---CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
+ LL+ M RN PD +TY + I + G D A F + + + ++
Sbjct: 285 EVRGLLQRM--RNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYS 342
Query: 406 AFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKN 465
A + + + R +A + V K + YS + + A+ ++ M KN
Sbjct: 343 AIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKN 402
Query: 466 GLRPNVSVYRRVLKHL 481
+PN + +L L
Sbjct: 403 DCKPNTVTHTALLNGL 418
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 46/94 (48%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y++++ R K D++V+M Q G P T+ N ++ LCK+ + A+A + +E+
Sbjct: 446 YSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQ 505
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
+ C + + + I R G + A + + M
Sbjct: 506 SKGCTINVVNFTTVIHGFSRQGDLESALSLMDDM 539
>gi|449436958|ref|XP_004136259.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Cucumis sativus]
gi|449497032|ref|XP_004160294.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Cucumis sativus]
Length = 504
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 66/124 (53%), Gaps = 2/124 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCE-PITLTYNYVLGVLCKNGQDADACELLEEM 357
+NIL+K CR D + +++ EM+ P +TY+ ++G LC+NG+ +A E EEM
Sbjct: 193 FNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYSTLIGGLCENGKLKEAIEFFEEM 252
Query: 358 LGR-NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
+ + N PDA+TY I I C+ GK D A M G P + ++ + GY R
Sbjct: 253 VSKDNILPDALTYNILINGFCQRGKVDRARTILEFMKSNGCSPNVFNYSVLMNGYCKEGR 312
Query: 417 YEDA 420
++A
Sbjct: 313 LQEA 316
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 57/99 (57%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y++L+ C+ + +++ E++ +G +P T++Y ++ LC+ G+ +A ELL++M
Sbjct: 300 YSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMK 359
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
++C D +T+ + + CR G+FD A + ++ G
Sbjct: 360 DKDCRADTVTFNVMLGGLCREGRFDEALDMVQKLPFEGF 398
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 55/126 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNILI C+R R +L M+ GC P Y+ ++ CK G+ +A E+ E+
Sbjct: 265 YNILINGFCQRGKVDRARTILEFMKSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIK 324
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD I+Y I CR G+ D A QM + + T + G R++
Sbjct: 325 SLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKDKDCRADTVTFNVMLGGLCREGRFD 384
Query: 419 DAYKYV 424
+A V
Sbjct: 385 EALDMV 390
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 3/166 (1%)
Query: 316 RDLLVEMR-QVGCEPITLTYNYVLGVLCKNGQDADACELLEEML-GRNCHPDAITYEIFI 373
R LLV R ++ P T +N ++ C+NG A E+++EM R +P+ +TY I
Sbjct: 174 RKLLVNARSKLNLRPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYSTLI 233
Query: 374 VYSCRVGKFDVAFNFFNQMV-KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYK 432
C GK A FF +MV K + P T+ I G+ + + A +
Sbjct: 234 GGLCENGKLKEAIEFFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTILEFMKSNGC 293
Query: 433 SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
S + YS+L + + K AK V +E+ G++P+ Y ++
Sbjct: 294 SPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLI 339
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI +CR +LL +M+ C T+T+N +LG LC+ G+ +A ++++++
Sbjct: 335 YTTLINCLCRTGRVDEATELLQQMKDKDCRADTVTFNVMLGGLCREGRFDEALDMVQKLP 394
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
+ + +Y I + + + G+ A M+ RG P AT
Sbjct: 395 FEGFYLNKGSYRIVLNFLTQKGELRKATELLGLMLNRGFVPHHAT 439
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 89/209 (42%), Gaps = 7/209 (3%)
Query: 280 GLYEMAKYVIKKTER-KVSY-----YNILIKEMCRRCDFKGPRDLLVEM-RQVGCEPITL 332
G + A V+K+ + +VSY Y+ LI +C K + EM + P L
Sbjct: 204 GDLQAAFEVVKEMKSARVSYPNLVTYSTLIGGLCENGKLKEAIEFFEEMVSKDNILPDAL 263
Query: 333 TYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
TYN ++ C+ G+ A +LE M C P+ Y + + C+ G+ A FN++
Sbjct: 264 TYNILINGFCQRGKVDRARTILEFMKSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEI 323
Query: 393 VKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNP 452
G++P ++ I R ++A + + DK + + ++++ +
Sbjct: 324 KSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKDKDCRADTVTFNVMLGGLCREGRF 383
Query: 453 VMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A +++ ++ G N YR VL L
Sbjct: 384 DEALDMVQKLPFEGFYLNKGSYRIVLNFL 412
>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
Length = 595
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 85/194 (43%), Gaps = 7/194 (3%)
Query: 294 RKVSYYNILIKEMCRRCD--FKGPRDLLVEM-RQV--GCEPITLTYNYVLGVLCKNGQDA 348
R YN ++ +CRR + R LLV+M R+ P ++Y V+ LC + +
Sbjct: 81 RDAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTG 140
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
+A LL M D +TY I C + D A ++M G+QP + ++ +
Sbjct: 141 EAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLL 200
Query: 409 KGYFIFYRYEDAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
+GY R++D K + +S K M L+ L + AK V M++ GL
Sbjct: 201 RGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAK-VKDMMVQRGL 259
Query: 468 RPNVSVYRRVLKHL 481
PNV Y ++ L
Sbjct: 260 EPNVVTYNVLINSL 273
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 2/131 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQ--VGCEPITLTYNYVLGVLCKNGQDADACEL 353
V YN LI + + L EM Q EP +T+N V+ LCK G+ A ++
Sbjct: 298 VVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKV 357
Query: 354 LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
E M R C + +TY I RV K +A N +++ GL+P T++ I G+
Sbjct: 358 REMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSK 417
Query: 414 FYRYEDAYKYV 424
+ + A K++
Sbjct: 418 MWEVDRAEKFL 428
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 60/129 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ L++ CR ++ + +M + G +P + + ++ LCK G+ A ++ +
Sbjct: 193 VVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKD 252
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M+ R P+ +TY + I C+ G A +M +G+ P + T+ I G
Sbjct: 253 MMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVL 312
Query: 416 RYEDAYKYV 424
++A ++
Sbjct: 313 EMDEAMSFL 321
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 79/189 (41%), Gaps = 2/189 (1%)
Query: 288 VIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQD 347
V + E V YN+LI +C+ + L EM G P +TYN ++ L +
Sbjct: 255 VQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEM 314
Query: 348 ADACELLEEMLGRN--CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
+A LEEM+ + PD +T+ I C++G+ A M +RG L T+
Sbjct: 315 DEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYN 374
Query: 406 AFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKN 465
I G+ ++ + A + A + YS+L + K A+ L M +
Sbjct: 375 YLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQR 434
Query: 466 GLRPNVSVY 474
G++ + Y
Sbjct: 435 GIKAELFHY 443
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 74/203 (36%), Gaps = 36/203 (17%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
M + I E Y+ILI + + L MRQ G + Y +L +C+
Sbjct: 393 MDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQ 452
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
G A L EM +NC DAI Y I +C+ G M+ GL P
Sbjct: 453 QGMMERAMGLFNEM-DKNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAP---- 507
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
DA Y +ML ++ A L D A+ VL +M
Sbjct: 508 ---------------DAVTY------------SMLINMYAKLGDLEE----AERVLKQMT 536
Query: 464 KNGLRPNVSVYRRVLKHLHTSHQ 486
+G P+V+V+ ++K Q
Sbjct: 537 ASGFVPDVAVFDSLIKGYSAEGQ 559
Score = 38.9 bits (89), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 42/94 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ +I C+ D K + L+ +M G P +TY+ ++ + K G +A +L++M
Sbjct: 477 YSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMT 536
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
PD ++ I G+ D ++M
Sbjct: 537 ASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEM 570
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 85/180 (47%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ LI+ C+ + +L M + +P +TYN ++ CK G+ A EL ++M+
Sbjct: 505 FTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMI 564
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
++ PD I+Y + C G A N +QM+++G++P L T IKGY
Sbjct: 565 RKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMP 624
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
AY+Y+ + Y+ L + K N A +++EM K GL+ N+ Y +L
Sbjct: 625 KAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLIL 684
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 40/173 (23%)
Query: 279 LGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLT 333
+G Y+ AK V+ + + + YN L+ E+CRR + +++ EM + G P ++
Sbjct: 340 IGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVS 399
Query: 334 YNYVLGVL-----------------------------------CKNGQDADACELLEEML 358
++ ++GVL C+NG +DA ++ +EML
Sbjct: 400 FSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEML 459
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
R C D +TY F+ C+ F A FN+MV+RG+ P T I+GY
Sbjct: 460 ARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGY 512
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 78/184 (42%), Gaps = 6/184 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ILI CR + EM GC +TYN L LCK ADA L EM+
Sbjct: 435 YTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMV 494
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R PD T+ I C+ G D A N F MV+ L+P T+ I G F +
Sbjct: 495 ERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDG---FCKAG 551
Query: 419 DAYKYVVLSADKYKSS---SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ + L D + ++ Y + + + A N+ +M++ G+RPN+
Sbjct: 552 EMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCN 611
Query: 476 RVLK 479
++K
Sbjct: 612 TLIK 615
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 83/186 (44%), Gaps = 6/186 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI CR + LL G EP LTYN +L LCK G+ A ++L EML
Sbjct: 295 YNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEML 354
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+A TY +V CR A F++M +RG+ P L + ++ I + R
Sbjct: 355 QLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIG---VLARNG 411
Query: 419 DAYKYVVLSADKYKSS---SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
Y+ ++ + +S N++Y++L +N A + EM+ G +V Y
Sbjct: 412 HLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYN 471
Query: 476 RVLKHL 481
L L
Sbjct: 472 TFLNGL 477
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 9/167 (5%)
Query: 243 KALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKK-TERKVSYYNI 301
+ L +KG+ + N++ G + +G L +E+ V++ E V NI
Sbjct: 211 QILRRKGVSVSINACNKLLGGLVRTGWVDLA--------WEIYGEVVRGGIELNVYTLNI 262
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
++ +C+ F+ L +M G +TYN ++ C+ G +A +LL R
Sbjct: 263 MVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRG 322
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
P +TY + C++GK+D A + +M++ GL P AT+ +
Sbjct: 323 MEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 69/151 (45%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
E+ + G E T N ++ LCK+ + + L +M G+ D +TY I CR G
Sbjct: 247 EVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREG 306
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+ AF N RG++P L T+ A + G +Y+ A ++ + + Y+
Sbjct: 307 LVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYN 366
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
L + +N + A+ + EM + G+ P++
Sbjct: 367 TLLVEICRRDNILEAQEIFDEMSRRGVLPDL 397
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 68/150 (45%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M + G P +T N ++ C++G A E L +M+ PD+ +Y I +
Sbjct: 597 QMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEA 656
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+ AF N+M KRGLQ + T+ + G+ + ++A + + + + YS
Sbjct: 657 NLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYS 716
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
L + H +N A EM++ GL P+
Sbjct: 717 SLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI + + + L+ EM + G + +TYN +L C G+ +A ++L +M+
Sbjct: 645 YNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMI 704
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
+PD TY I AF F ++M++RGL P
Sbjct: 705 EIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVP 745
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 57/124 (45%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N LIK CR D + L +M G P + +YN ++ K A L+ EM
Sbjct: 611 NTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEK 670
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
R + ITY + + C GK A +M++ G+ P AT+++ I G+ ++
Sbjct: 671 RGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKE 730
Query: 420 AYKY 423
A+++
Sbjct: 731 AFRF 734
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 82/186 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +N LI+ +C + + +L EMR GCEP TYN ++ LC G+ +A +L+
Sbjct: 400 VCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLK 459
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M C ITY I C+ K A F++M G+ T+ I G
Sbjct: 460 QMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSR 519
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R EDA + + + + Y+ L + + + A +++ M NG P++ Y
Sbjct: 520 RVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYG 579
Query: 476 RVLKHL 481
++ L
Sbjct: 580 TLISGL 585
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 92/201 (45%), Gaps = 9/201 (4%)
Query: 217 LLNDFNVYQVCLNEKAFG-FLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEM 275
+L D Y + +EK F + I L G R+ E + + G S V ++
Sbjct: 211 MLEDMPSYGLVPDEKTFTTVMQGYIEEGDL--DGALRIREQMVEFGCSWSNVSVNVIVHG 268
Query: 276 FSVLGLYEMAKYVIKKTERKVSYY------NILIKEMCRRCDFKGPRDLLVEMRQVGCEP 329
F G E A I++ + ++ N L+ +C+ K +++ M Q G +P
Sbjct: 269 FCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDP 328
Query: 330 ITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFF 389
TYN V+ LCK G+ +A E+L++M+ R+C P+ +TY I C+ + + A
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA 388
Query: 390 NQMVKRGLQPRLATHAAFIKG 410
+ +G+ P + T + I+G
Sbjct: 389 RVLTSKGILPDVCTFNSLIQG 409
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 109/269 (40%), Gaps = 29/269 (10%)
Query: 242 SKALTKKGIWRVVEVLNQ-VGGSCLVSGVRALIEMFSVL--------------------- 279
++ LT KGI V N + G CL R +E+F +
Sbjct: 388 ARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCS 447
Query: 280 -GLYEMAKYVIKKTE-----RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLT 333
G + A ++K+ E R V YN LI C+ + ++ EM G ++T
Sbjct: 448 KGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVT 507
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
YN ++ LCK+ + DA +L+++M+ PD TY + + CR G A + M
Sbjct: 508 YNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMT 567
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPV 453
G +P + T+ I G R E A K + K + + Y+ + +
Sbjct: 568 SNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTT 627
Query: 454 MAKNVLSEMM-KNGLRPNVSVYRRVLKHL 481
A N+ EM+ +N P+ YR V + L
Sbjct: 628 EAINLFREMLEQNEAPPDAVSYRIVFRGL 656
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 98/257 (38%), Gaps = 43/257 (16%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
V G C V+ IE+ V+ + + + V YN +I +C+ + K ++L
Sbjct: 302 VNGLCKAGHVKHAIEIMDVM--------LQEGYDPDVYTYNSVISGLCKLGEVKEAVEVL 353
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACEL-------------------------- 353
+M C P T+TYN ++ LCK Q +A EL
Sbjct: 354 DQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLT 413
Query: 354 ---------LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
EEM + C PD TY + I C GK D A N QM G + T+
Sbjct: 414 RNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITY 473
Query: 405 AAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMK 464
I G+ + +A + S +++ Y+ L K+ A ++ +M+
Sbjct: 474 NTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIM 533
Query: 465 NGLRPNVSVYRRVLKHL 481
G +P+ Y +L H
Sbjct: 534 EGQKPDKYTYNSLLTHF 550
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 91/215 (42%), Gaps = 4/215 (1%)
Query: 277 SVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNY 336
++L L +M Y + E+ + +++ D G + +M + GC ++ N
Sbjct: 208 AILMLEDMPSYGLVPDEKT---FTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNV 264
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCH-PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR 395
++ CK G+ DA ++EM ++ PD T+ + C+ G A + M++
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324
Query: 396 GLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMA 455
G P + T+ + I G ++A + + + S + + Y+ L S K N A
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384
Query: 456 KNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
+ + G+ P+V + +++ L + +A
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVA 419
>gi|225430029|ref|XP_002281569.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Vitis vinifera]
Length = 635
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 108/264 (40%), Gaps = 43/264 (16%)
Query: 257 LNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIK------KTERKVSYYNILIKEMCRRC 310
+ + G S LI+ + + G E ++ +++ + YN+L++ C +
Sbjct: 168 MKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQDENVRPNLRTYNVLVRAWCNKK 227
Query: 311 DFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYE 370
+ +++ +M G +P +TYN + +NG+ + A ++ EM N P+ T
Sbjct: 228 NIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCC 287
Query: 371 IFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADK 430
I I C+ GK A F +M GLQP L + IKG FI D V+ ++
Sbjct: 288 IIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKG-FIDAVDRDGVNEVLTLMEE 346
Query: 431 YKSSSNML------------------------------------YSLLASLHDKNNNPVM 454
+ +++ YS+LA + + P
Sbjct: 347 FGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAKGYVRAGEPEK 406
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVL 478
A+ +L+ M+K+G PNV ++ ++
Sbjct: 407 AEEILNAMIKSGFHPNVVIFTTII 430
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 2/125 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADAC-ELLEEM 357
+N LIK D G ++L M + G +P +T++ ++ G D C E+ ++M
Sbjct: 321 FNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAG-FMDKCREIFDDM 379
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
+ PDA Y I R G+ + A N M+K G P + I G+ R
Sbjct: 380 VKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRM 439
Query: 418 EDAYK 422
E A K
Sbjct: 440 EYAIK 444
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 83/195 (42%), Gaps = 5/195 (2%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
++K + + NI+I E R + + D ++E G +P +TY +L L
Sbjct: 64 LSKTSCRTVRSRTKLMNIMI-EKGRPQEVQSILDSIIEG---GHKPSLVTYTTLLAALTI 119
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
++ ++ PD+I + I G A +F +M + G +P +T
Sbjct: 120 QKHFDSIHSIISQVEENGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTST 179
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM-LYSLLASLHDKNNNPVMAKNVLSEM 462
IKGY I E++ K + L + N+ Y++L N + A NV+ +M
Sbjct: 180 FNTLIKGYGIAGEPEESQKLLELMSQDENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKM 239
Query: 463 MKNGLRPNVSVYRRV 477
+ +GL+P+ Y +
Sbjct: 240 VASGLQPDAVTYNTI 254
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 43/96 (44%)
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
R++ +M + +P Y+ + + G+ A E+L M+ HP+ + + I
Sbjct: 373 REIFDDMVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVIFTTIING 432
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
C G+ + A F +M + G+ P L T I GY
Sbjct: 433 WCSAGRMEYAIKIFEKMCECGIAPNLKTFETLIWGY 468
>gi|255580124|ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529547|gb|EEF31500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 160/379 (42%), Gaps = 16/379 (4%)
Query: 114 SRCISSFAMVNGPYATPKQVSEIIELL---RSGDSETESKLLSMSVSLSNASVIEILRVL 170
S +SS A +P V+EI +L R+ + E L + S +S V ++L+
Sbjct: 25 SYTLSSLAPRTKNLPSPDLVNEISRILSDHRNPHHDLELSLTTYSSHISTTLVEQVLKRC 84
Query: 171 NSEKVSALCFLKYMREIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQ-VCLN 229
+ SA F + + I P F + + +++D G + + L + Q ++
Sbjct: 85 KNLGFSAQRFFLWAKRI-PGFDHSKESYHILVDILGSSKQFALLWDFLIEIRESQDFEIS 143
Query: 230 EKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVI 289
+ F + S L I R + + + G L + L ++ VL + AK+
Sbjct: 144 PQVFWLVFRAYSRANLPSDAI-RAFDRMVEFG---LKPTIDDLDQLLYVLCKRKHAKHAQ 199
Query: 290 KKTER-------KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLC 342
+ +R + Y+IL++ + + EMR+ C L YN +L C
Sbjct: 200 QIFDRVKHQFQTRAKTYSILVRGWGDIGESVSACKVFDEMREQQCAVDVLAYNSLLEAFC 259
Query: 343 KNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLA 402
K G+ ++A ++ EM PDA T+ IFI C +A+ ++M + L P +
Sbjct: 260 KGGKVSEAYKMFREMGSNGIKPDACTFSIFIRAYCEANDIHLAYRVLDEMKRYDLVPNVF 319
Query: 403 THAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM 462
T+ IK + E+AY+ + ++ Y+ + + H +++ A ++S M
Sbjct: 320 TYNCMIKKLCKKEKVEEAYQLLNEIIERSGQPDAWSYNAILAYHCEHSEVNSATRLISRM 379
Query: 463 MKNGLRPNVSVYRRVLKHL 481
+K+ P+ Y +LK L
Sbjct: 380 VKDNCLPDKHSYNMLLKLL 398
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 3/130 (2%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L EM +Y + V YN +IK++C++ + LL E+ + +P +YN +L
Sbjct: 306 LDEMKRYDLVPN---VFTYNCMIKKLCKKEKVEEAYQLLNEIIERSGQPDAWSYNAILAY 362
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
C++ + A L+ M+ NC PD +Y + + RVG+FD A + M ++G P
Sbjct: 363 HCEHSEVNSATRLISRMVKDNCLPDKHSYNMLLKLLIRVGRFDRAIEVWESMGEKGFYPS 422
Query: 401 LATHAAFIKG 410
++T++ + G
Sbjct: 423 VSTYSVMVHG 432
>gi|357168491|ref|XP_003581673.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Brachypodium distachyon]
Length = 392
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 8/191 (4%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+NILIK +C+ F LL EM + C P +TY+ ++ LC++G+ A EL E M
Sbjct: 180 FNILIKGLCQFGKFDEAISLLHEMPKQECLPNVVTYSTLMHFLCQHGRVDKAFELFERMR 239
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
D + Y I I CR GK +AF+ F M G P T+ + +
Sbjct: 240 KEEIDADTVVYNILISGLCREGKVTIAFDMFKSMSSEGCYPNSGTYQVLLDSLLTSRNFT 299
Query: 419 DAYKYV-VLSADKYK---SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+A V ++SA+ + SS +L L S++ + ++ K +M+ G P + +
Sbjct: 300 EAKDLVCMMSAEGLRPSFSSYKLLIDGLCSVNCLEDGHLIFK----QMVDQGFIPRMGTW 355
Query: 475 RRVLKHLHTSH 485
++L + ++
Sbjct: 356 TKLLTSMSLTY 366
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 27/213 (12%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
LY M Y + + +Y +L +C+R ++ ++ +G T +N ++
Sbjct: 130 LYAMPGYNCWPSTKTFNY--VLHMLVCKR-QYEVIHEVYESAPWLGVTLDTCCFNILIKG 186
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
LC+ G+ +A LL EM + C P+ +TY + + C+ G+ D AF F +M K +
Sbjct: 187 LCQFGKFDEAISLLHEMPKQECLPNVVTYSTLMHFLCQHGRVDKAFELFERMRKEEIDAD 246
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN------------MLYSLLASLHDK 448
+ I G V ++ D +KS S+ +L SLL S
Sbjct: 247 TVVYNILISGLC-------REGKVTIAFDMFKSMSSEGCYPNSGTYQVLLDSLLTS---- 295
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
N AK+++ M GLRP+ S Y+ ++ L
Sbjct: 296 -RNFTEAKDLVCMMSAEGLRPSFSSYKLLIDGL 327
>gi|357135887|ref|XP_003569539.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Brachypodium distachyon]
Length = 476
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 87/186 (46%), Gaps = 2/186 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ YN+L+K C D P + V + + +P +YN V+ LC+ + ADA E+
Sbjct: 161 TATYNVLLKAHC--SDASAPIEDAVRLFRNIPKPDACSYNTVIDGLCRRSRRADAQEIFS 218
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM+ P +TY I + R G D A F++M + G+ P + T+++ I G
Sbjct: 219 EMVANGVAPTVVTYTTVINWLARDGCLDDALKMFDEMGRIGIAPNVVTYSSLIDGLCKGG 278
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R A + + A + K + + YS + + K + A VL M G +P+ ++
Sbjct: 279 RAASALELLDRMAKEAKLPNTITYSSVINGLCKEDRLNEAMEVLDRMRLQGRKPDAGLFG 338
Query: 476 RVLKHL 481
+++ L
Sbjct: 339 KLIVGL 344
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 7/199 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I +CRR +++ EM G P +TY V+ L ++G DA ++ +EM
Sbjct: 197 YNTVIDGLCRRSRRADAQEIFSEMVANGVAPTVVTYTTVINWLARDGCLDDALKMFDEMG 256
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ +TY I C+ G+ A ++M K P T+++ I G R
Sbjct: 257 RIGIAPNVVTYSSLIDGLCKGGRAASALELLDRMAKEAKLPNTITYSSVINGLCKEDRLN 316
Query: 419 DAYKYV-VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+A + + + K + + L+ L V A N L EM+ +G+ PN RV
Sbjct: 317 EAMEVLDRMRLQGRKPDAGLFGKLIVGLCGAGRA-VEAANYLDEMVLSGVEPN-----RV 370
Query: 478 LKHLHTSHQEHMAKCLSSR 496
LH + + L ++
Sbjct: 371 TWSLHVRINDAVVTALCAK 389
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 273 IEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITL 332
++MF +G +A V+ Y+ LI +C+ +LL M + P T+
Sbjct: 249 LKMFDEMGRIGIAPNVVT--------YSSLIDGLCKGGRAASALELLDRMAKEAKLPNTI 300
Query: 333 TYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
TY+ V+ LCK + +A E+L+ M + PDA + IV C G+ A N+ ++M
Sbjct: 301 TYSSVINGLCKEDRLNEAMEVLDRMRLQGRKPDAGLFGKLIVGLCGAGRAVEAANYLDEM 360
Query: 393 VKRGLQPRLATHAAFIK 409
V G++P T + ++
Sbjct: 361 VLSGVEPNRVTWSLHVR 377
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 67/151 (44%), Gaps = 8/151 (5%)
Query: 274 EMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLT 333
E+FS + +A V+ T + N L ++ C K + EM ++G P +T
Sbjct: 215 EIFSEMVANGVAPTVVTYT----TVINWLARDGCLDDALK----MFDEMGRIGIAPNVVT 266
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
Y+ ++ LCK G+ A A ELL+ M P+ ITY I C+ + + A ++M
Sbjct: 267 YSSLIDGLCKGGRAASALELLDRMAKEAKLPNTITYSSVINGLCKEDRLNEAMEVLDRMR 326
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDAYKYV 424
+G +P I G R +A Y+
Sbjct: 327 LQGRKPDAGLFGKLIVGLCGAGRAVEAANYL 357
>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
Length = 641
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 90/218 (41%), Gaps = 8/218 (3%)
Query: 264 CLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMR 323
C V V ++MF + + K + V Y L+ +C+ LL EM+
Sbjct: 180 CKVGLVDDAVQMFRDMP--------VSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQ 231
Query: 324 QVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
GC P +T+N ++ LCK G A +L++ M + C P+ +TY I C GK +
Sbjct: 232 IDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLE 291
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
A + ++MV P + T+ I G R D + + L ++ + +YS L
Sbjct: 292 KAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALI 351
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
S K A + EM N VY V+ L
Sbjct: 352 SGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGL 389
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 84/192 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N+LI +C++ D L+ M GC P +TYN ++ LC G+ A LL+ M+
Sbjct: 242 FNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMV 301
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C P+ +TY I + G+ M +RG ++A I G F + +
Sbjct: 302 SSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQ 361
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + K + ++YS + ++ P A VLSEM N +PN Y ++
Sbjct: 362 EAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLM 421
Query: 479 KHLHTSHQEHMA 490
K + H A
Sbjct: 422 KGFFEAGNGHKA 433
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 94/229 (41%), Gaps = 26/229 (11%)
Query: 273 IEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITL 332
IEM+ +MAK+ + E Y++LI +C+ K + +M GC+P +
Sbjct: 434 IEMWK-----DMAKHNFTQNE---VCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVV 485
Query: 333 TYNYVLGVLCKNGQDADACELLEEMLGR--NCHPDAITYEIFIVYSCRVGKFDVAFNFFN 390
Y ++ L G DA +L EML + + PD +TY I + C+ A + N
Sbjct: 486 AYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLN 545
Query: 391 QMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNN 450
M+ RG P L T F+ + + D + L L+ L K
Sbjct: 546 SMLDRGCDPDLVTCIIFL-------------RTLREKLDPPQDGREFLDGLVVRLL-KRQ 591
Query: 451 NPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSH--QEHMAKCLSSRY 497
+ A ++ M++ L P S + RV++ L Q + KC S Y
Sbjct: 592 RVLGASKIVEVMLQKLLPPKPSTWTRVVEDLCNPKKVQAAIQKCWSILY 640
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 85/192 (44%), Gaps = 6/192 (3%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y +I + ++ +L M + G Y+ ++ L K G+ +A +L +
Sbjct: 309 VVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFK 368
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM + C + I Y I CR GK D A ++M +P T+++ +KG F+
Sbjct: 369 EMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKG---FF 425
Query: 416 RYEDAYKYVVLSADKYK---SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
+ +K + + D K + + + YS+L K+ A V ++M+ G +P+V
Sbjct: 426 EAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVV 485
Query: 473 VYRRVLKHLHTS 484
Y ++ L +
Sbjct: 486 AYGSMINGLSNA 497
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 125/288 (43%), Gaps = 30/288 (10%)
Query: 223 VYQVCLN---EKAFGFLPVLISSKALTKKGIW-RVVEVLNQVGGSCLVSGVRALIE---- 274
++ +CL EKA L ++SSK + + ++ L + G + + V AL+E
Sbjct: 281 IHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGY 340
Query: 275 -----MFSVL--GLYEMAK----------YVIKKTERKVSYYNILIKEMCRRCDFKGPRD 317
++S L GL++ K +K+ E Y+ +I +CR +
Sbjct: 341 HVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALE 400
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
+L EM C+P TY+ ++ + G A E+ ++M N + + Y + I C
Sbjct: 401 VLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLC 460
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV--VLSADKYKSSS 435
+ GK A + QM+ +G +P + + + I G EDA + +L +
Sbjct: 461 KDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPD 520
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS---VYRRVLKH 480
+ Y++L + K ++ A ++L+ M+ G P++ ++ R L+
Sbjct: 521 VVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTLRE 568
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 41/92 (44%)
Query: 319 LVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCR 378
++ + V P LT+N V+ +CK G DA ++ +M C PD TY + C+
Sbjct: 157 VIGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCK 216
Query: 379 VGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ D A + ++M G P T I G
Sbjct: 217 ADRIDEAVSLLDEMQIDGCFPSPVTFNVLING 248
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 65/159 (40%), Gaps = 5/159 (3%)
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGR---NCHPDAITYEIFIVYSCRVGKFD 383
C+ ++N VL V+ + G A E ++G N P+ +T+ + I C+VG D
Sbjct: 127 CKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIKTMCKVGLVD 186
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV-VLSADKYKSSSNMLYSLL 442
A F M QP + T+ + G R ++A + + D S L+
Sbjct: 187 DAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLI 246
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
L K + +AK ++ M G PN Y ++ L
Sbjct: 247 NGLCKKGDLARVAK-LVDNMFLKGCAPNEVTYNTLIHGL 284
>gi|147812173|emb|CAN61517.1| hypothetical protein VITISV_033966 [Vitis vinifera]
Length = 635
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 108/264 (40%), Gaps = 43/264 (16%)
Query: 257 LNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIK------KTERKVSYYNILIKEMCRRC 310
+ + G S LI+ + + G E ++ +++ + YN+L++ C +
Sbjct: 168 MKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLZLMSQDENVRPNLRTYNVLVRAWCNKX 227
Query: 311 DFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYE 370
+ +++ +M G +P +TYN + +NG+ + A ++ EM N P+ T
Sbjct: 228 NIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCC 287
Query: 371 IFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADK 430
I I C+ GK A F +M GLQP L + IKG FI D V+ ++
Sbjct: 288 IIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKG-FIDAVDRDGVNEVLTLMEE 346
Query: 431 YKSSSNML------------------------------------YSLLASLHDKNNNPVM 454
+ +++ YS+LA + + P
Sbjct: 347 FGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAKGYVRAGEPEK 406
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVL 478
A+ +L+ M+K+G PNV ++ ++
Sbjct: 407 AEEILNAMIKSGFHPNVVMFTTII 430
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 2/125 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADAC-ELLEEM 357
+N LIK D G ++L M + G +P +T++ ++ G D C E+ ++M
Sbjct: 321 FNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAG-FMDKCREIFDDM 379
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
+ PDA Y I R G+ + A N M+K G P + I G+ R
Sbjct: 380 VKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVMFTTIINGWCSAGRM 439
Query: 418 EDAYK 422
E A K
Sbjct: 440 EYAIK 444
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 83/195 (42%), Gaps = 5/195 (2%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
++K + + NI+I E R + + D ++E G +P +TY +L L
Sbjct: 64 LSKTSCRTVRSRTKLMNIMI-EKGRPQEVQSILDSIIEG---GHKPSLVTYTTLLAALTI 119
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
++ ++ PD+I + I G A +F +M + G +P +T
Sbjct: 120 QKHFDSIHSIISQVEENGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTST 179
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM-LYSLLASLHDKNNNPVMAKNVLSEM 462
IKGY I E++ K + L + N+ Y++L N + A NV+ +M
Sbjct: 180 FNTLIKGYGIAGEPEESQKLLZLMSQDENVRPNLRTYNVLVRAWCNKXNIMKAWNVVYKM 239
Query: 463 MKNGLRPNVSVYRRV 477
+ +GL+P+ Y +
Sbjct: 240 VASGLQPDAVTYNTI 254
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 43/96 (44%)
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
R++ +M + +P Y+ + + G+ A E+L M+ HP+ + + I
Sbjct: 373 REIFDDMVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVMFTTIING 432
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
C G+ + A F +M + G+ P L T I GY
Sbjct: 433 WCSAGRMEYAIKIFEKMCECGIAPNLKTFETLIWGY 468
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 94/215 (43%), Gaps = 5/215 (2%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI +S G ++ A V K+ R+ V +N+L+ +C+ K RD+ M G
Sbjct: 295 LIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKG 354
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
P +YN +L G D +L + MLG P T+ + I G D A
Sbjct: 355 QNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAM 414
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
FN+M G++P + T+ I + +DA + D+ + Y L
Sbjct: 415 IIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGF 474
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + + AK ++SE+M NG+ ++ ++ ++ +L
Sbjct: 475 CTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNL 509
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 82/187 (43%), Gaps = 2/187 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVG--CEPITLTYNYVLGVLCKNGQDADACELLEE 356
Y+IL+K +C + DLL M + G C P + YN V+ K G AC+L +E
Sbjct: 185 YSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKE 244
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
M+ R PD +TY + C+ D A F QMV +G+ P T+ I GY +
Sbjct: 245 MVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQ 304
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
+++A + + + +++L K A++V M G P+V Y
Sbjct: 305 WKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNI 364
Query: 477 VLKHLHT 483
+L T
Sbjct: 365 MLNGYAT 371
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 80/183 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ LI+ C ++L+ E+ G + ++ ++ LCK G+ DA + + +
Sbjct: 467 YHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTV 526
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
HP A+ Y + + C VGK + A F+ MV G++P + + GY R +
Sbjct: 527 NVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRID 586
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ K S +LY+++ + V AK EM ++G+ N Y VL
Sbjct: 587 EGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVL 646
Query: 479 KHL 481
+ L
Sbjct: 647 RGL 649
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 95/225 (42%), Gaps = 5/225 (2%)
Query: 272 LIEMFSVLGLYEMAKYVIKK-----TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI+ ++ G+ + A + + + V Y +I +CR + +M G
Sbjct: 400 LIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQG 459
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
P Y+ ++ C +G A EL+ E++ H D + + I C++G+ A
Sbjct: 460 VAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQ 519
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
N F+ V GL P ++ + GY + + E A + ++++Y L + +
Sbjct: 520 NIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGY 579
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
K ++ EM++ G++P+ +Y ++ L + + AK
Sbjct: 580 CKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAK 624
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 3/185 (1%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMR-QVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
N L+K C D+L+ ++GC P +Y+ +L LC G+ A +LL M
Sbjct: 150 NHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMA 209
Query: 359 --GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
G C PD + Y I + G + A + F +MV+RG+ P T+++ +
Sbjct: 210 EGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARA 269
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
+ A ++ +K +N Y+ L + A V EM + + P+V +
Sbjct: 270 MDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNM 329
Query: 477 VLKHL 481
++ L
Sbjct: 330 LMGSL 334
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 82/221 (37%), Gaps = 35/221 (15%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK------------ 343
V YN +I + D DL EM Q G P +TY+ V+ LCK
Sbjct: 219 VVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLR 278
Query: 344 -----------------------NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
GQ +A + +EM ++ PD +T+ + + C+ G
Sbjct: 279 QMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYG 338
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
K A + F+ M +G P + ++ + GY D L + ++
Sbjct: 339 KIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFN 398
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+L + A + +EM +G++PNV Y V+ L
Sbjct: 399 VLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAAL 439
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 81/184 (44%), Gaps = 2/184 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y++L+ C + + M G EP + Y ++ CK G+ + L EML
Sbjct: 537 YSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREML 596
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P I Y I I G+ A F++M + G+ T++ ++G F ++
Sbjct: 597 QKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFD 656
Query: 419 DA-YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+A + + L A K L +++A + + AK++ + + ++GL P V Y +
Sbjct: 657 EAIFLFKELRAMNVKIDIITLNTMIAGMF-QTRRVEEAKDLFASISRSGLVPCVVTYSIM 715
Query: 478 LKHL 481
+ +L
Sbjct: 716 ITNL 719
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 85/180 (47%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ LI+ C+ + +L M + +P +TYN ++ CK G+ A EL ++M+
Sbjct: 505 FTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMI 564
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
++ PD I+Y + C G A N +QM+++G++P L T IKGY
Sbjct: 565 RKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMP 624
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
AY+Y+ + Y+ L + K N A +++EM K GL+ N+ Y +L
Sbjct: 625 KAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLIL 684
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 40/173 (23%)
Query: 279 LGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLT 333
+G Y+ AK V+ + + + YN L+ E+CRR + +++ EM + G P ++
Sbjct: 340 IGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVS 399
Query: 334 YNYVLGVL-----------------------------------CKNGQDADACELLEEML 358
++ ++GVL C+NG +DA ++ +EML
Sbjct: 400 FSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEML 459
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
R C D +TY F+ C+ F A FN+MV+RG+ P T I+GY
Sbjct: 460 ARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGY 512
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 78/184 (42%), Gaps = 6/184 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ILI CR + EM GC +TYN L LCK ADA L EM+
Sbjct: 435 YTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMV 494
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R PD T+ I C+ G D A N F MV+ L+P T+ I G F +
Sbjct: 495 ERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDG---FCKAG 551
Query: 419 DAYKYVVLSADKYKSS---SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ + L D + ++ Y + + + A N+ +M++ G+RPN+
Sbjct: 552 EMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCN 611
Query: 476 RVLK 479
++K
Sbjct: 612 TLIK 615
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 83/186 (44%), Gaps = 6/186 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI CR + LL G EP LTYN +L LCK G+ A ++L EML
Sbjct: 295 YNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEML 354
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+A TY +V CR A F++M +RG+ P L + ++ I + R
Sbjct: 355 QLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIG---VLARNG 411
Query: 419 DAYKYVVLSADKYKSS---SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
Y+ ++ + +S N++Y++L +N A + EM+ G +V Y
Sbjct: 412 HLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYN 471
Query: 476 RVLKHL 481
L L
Sbjct: 472 TFLNGL 477
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 9/167 (5%)
Query: 243 KALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKK-TERKVSYYNI 301
+ L +KG+ + N++ G + +G L +E+ V++ E V NI
Sbjct: 211 QILRRKGVSVSINACNKLLGGLVRTGWVDLA--------WEIYGEVVRGGIELNVYTLNI 262
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
++ +C+ F+ L +M G +TYN ++ C+ G +A +LL R
Sbjct: 263 MVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRG 322
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
P +TY + C++GK+D A + +M++ GL P AT+ +
Sbjct: 323 MEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 69/151 (45%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
E+ + G E T N ++ LCK+ + + L +M G+ D +TY I CR G
Sbjct: 247 EVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREG 306
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+ AF N RG++P L T+ A + G +Y+ A ++ + + Y+
Sbjct: 307 LVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYN 366
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
L + +N + A+ + EM + G+ P++
Sbjct: 367 TLLVEICRRDNILEAQEIFDEMSRRGVLPDL 397
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 68/150 (45%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M + G P +T N ++ C++G A E L +M+ PD+ +Y I +
Sbjct: 597 QMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEA 656
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+ AF N+M KRGLQ + T+ + G+ + ++A + + + + YS
Sbjct: 657 NLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYS 716
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
L + H +N A EM++ GL P+
Sbjct: 717 SLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI + + + L+ EM + G + +TYN +L C G+ +A ++L +M+
Sbjct: 645 YNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMI 704
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
+PD TY I AF F ++M++RGL P
Sbjct: 705 EIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVP 745
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 57/124 (45%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N LIK CR D + L +M G P + +YN ++ K A L+ EM
Sbjct: 611 NTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEK 670
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
R + ITY + + C GK A +M++ G+ P AT+++ I G+ ++
Sbjct: 671 RGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKE 730
Query: 420 AYKY 423
A+++
Sbjct: 731 AFRF 734
>gi|297733848|emb|CBI15095.3| unnamed protein product [Vitis vinifera]
Length = 815
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 139/344 (40%), Gaps = 13/344 (3%)
Query: 132 QVSEIIELLRSGDSETESKLLSM-SVSLSNASVIEILRVLNSEKVSALCFLKYMREIMPE 190
Q + I+ L+ DS+T ++ L V + V +L++L + AL F K + + P
Sbjct: 38 QDATIVNLVLKTDSQTLTRTLEKYPVEWTPNLVDRVLKLLWNHGPKALQFFKSL-DYHPT 96
Query: 191 FYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGI 250
+ S ID GRL DY+T+ L++ ++ N K F + S + I
Sbjct: 97 YAHVSSSFDHAIDIAGRLRDYKTLWTLVDRMRTRRLGPNPKTFAIITERYVSAGKPDRAI 156
Query: 251 WRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRC 310
++ +++ G ++ ++++ EMA + K + + R
Sbjct: 157 -KIFFSMHEHGCVQDLNSFNTILDVLCKSKRVEMADNKLFK----------VFRGFFRAG 205
Query: 311 DFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYE 370
K + ++M++ CE +TY V+ G+ A + EM+G P TY
Sbjct: 206 QLKEAWEFFLQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGVLPSVATYN 265
Query: 371 IFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADK 430
FI C+ + A + F +M+++G P T+ I+G R E A +++ D
Sbjct: 266 AFIQVLCKKDNVENAISVFEEMLRKGYMPNSTTYNVVIRGLCHVGRMEKAMEFMARMKDD 325
Query: 431 YKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ +Y+++ NV +M PN+ Y
Sbjct: 326 ECEPNVQIYNVVIRYFCDAEEIEKGLNVFEKMGDADCLPNLDTY 369
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 53/118 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V+ YN I+ +C++ + + + EM + G P + TYN V+ LC G+ A E +
Sbjct: 261 VATYNAFIQVLCKKDNVENAISVFEEMLRKGYMPNSTTYNVVIRGLCHVGRMEKAMEFMA 320
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
M C P+ Y + I Y C + + N F +M P L T+ I F+
Sbjct: 321 RMKDDECEPNVQIYNVVIRYFCDAEEIEKGLNVFEKMGDADCLPNLDTYNILISAMFV 378
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 73/196 (37%), Gaps = 57/196 (29%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKN--------------------GQDADACELLEEM 357
+ M + GC ++N +L VLCK+ GQ +A E +M
Sbjct: 158 IFFSMHEHGCVQDLNSFNTILDVLCKSKRVEMADNKLFKVFRGFFRAGQLKEAWEFFLQM 217
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
R C D +TY + G+ A FN+M+ G+ P +AT+ AFI+
Sbjct: 218 KKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGVLPSVATYNAFIQ-------- 269
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
VL K +N A +V EM++ G PN + Y V
Sbjct: 270 -------VLC--------------------KKDNVENAISVFEEMLRKGYMPNSTTYNVV 302
Query: 478 LKHLHTSHQEHMAKCL 493
++ L H M K +
Sbjct: 303 IRGL--CHVGRMEKAM 316
>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g55840-like [Cucumis sativus]
Length = 1079
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 94/200 (47%), Gaps = 7/200 (3%)
Query: 266 VSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLV 320
VS LI + V G + A ++ ER + YN L+ C++ FK L+
Sbjct: 175 VSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIH 234
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
M G + TYN + LC+N + A +L++M + P+ ++Y I + G
Sbjct: 235 HMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEG 294
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV-VLSADKYKSSSNMLY 439
K VA FN+M++ L P L T+ I GY I +E+A + + V+ A+ + + +
Sbjct: 295 KIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIG 354
Query: 440 SLLASLHDKNNNPVMAKNVL 459
+LL L+ V A+N+L
Sbjct: 355 TLLNGLYKSAKFDV-ARNIL 373
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 91/242 (37%), Gaps = 35/242 (14%)
Query: 279 LGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
LG+ + ++ + + +N+LI++ C D DL M T V
Sbjct: 789 LGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVT 848
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
VL + + + EML + P + Y + CRVG AF +QMV G+
Sbjct: 849 DVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGIS 908
Query: 399 PRLATHAAFIKGYFIFYRYEDAY---------------------KYVVLSADKYKSSSNM 437
A A ++G + + E+A +V D +K + N+
Sbjct: 909 LDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNL 968
Query: 438 --------------LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHT 483
Y++L S N + + A + E+ + GL PN++ YR ++ + T
Sbjct: 969 KILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAIST 1028
Query: 484 SH 485
H
Sbjct: 1029 KH 1030
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 77/176 (43%), Gaps = 2/176 (1%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N+++ M + C +M P ++N ++ VLC G+ A +L M+
Sbjct: 144 NMIMASMVKNCRAHLVWXFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNIL-TMME 202
Query: 360 RNCH-PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
RN + P ++Y + + C+ G+F A + M +G+Q + T+ FI R
Sbjct: 203 RNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSA 262
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
Y + +K + + + Y+ L + K +A V +EM++ L PN+ Y
Sbjct: 263 QGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITY 318
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+K +C+ +F R LL ++ + T++YN ++ + K+G +A L EEM+
Sbjct: 563 YGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMI 622
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQ-MVKRGLQPRLATHAAFIKGYF 412
N PD+ TY + R G+ AF F + M K L + FI G F
Sbjct: 623 QNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLF 677
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 125/335 (37%), Gaps = 45/335 (13%)
Query: 184 MREIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSK 243
+R P Y + I + ++ NC + +Q+L +VC N +F L ++ +
Sbjct: 133 IRGFKPSVYTCNMIMASMVKNCRAHLVWXFFKQMLTS----RVCPNVSSFNILISVLCVQ 188
Query: 244 ALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSY 298
KK + ++ ++ + G + L+ G ++ A +I E K V
Sbjct: 189 GKLKKAV-NILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCT 247
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+ I +CR +L +MR P ++YN ++ K G+ A + EM+
Sbjct: 248 YNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMI 307
Query: 359 GRNCHPDAITYEIFIVYSCRVG-----------------------------------KFD 383
N P+ ITY I I C G KFD
Sbjct: 308 ELNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFD 367
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
VA N + +H I G ++A++ ++ + +S+L
Sbjct: 368 VARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLI 427
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ K N AK V+S++ + G PN ++ ++
Sbjct: 428 NGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLI 462
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 2/140 (1%)
Query: 332 LTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQ 391
+++ ++ LC+NG +A +LL EM +PD IT+ + I C+VG + A ++
Sbjct: 386 ISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSK 445
Query: 392 MVKRGLQPRLATHAAFI-KGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNN 450
+ + G P + I + YE Y ++ + + + SL+ASL + N
Sbjct: 446 IYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCE-NG 504
Query: 451 NPVMAKNVLSEMMKNGLRPN 470
V A+ L + + GL PN
Sbjct: 505 KLVEAEEFLHHISRIGLVPN 524
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 90/222 (40%), Gaps = 17/222 (7%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERKV-----SYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
LI F +G AK V+ K R+ ++ LI C+ + M
Sbjct: 425 VLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLN 484
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G T N ++ LC+NG+ +A E L + P+++T++ I VG A
Sbjct: 485 GQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGA 544
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY------VVLSADKYKSSSNMLY 439
F+ F++M+ G P T+ + +K + +A K + L+ D Y
Sbjct: 545 FSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTIS------Y 598
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ L K+ N + A + EM++N + P+ Y +L L
Sbjct: 599 NTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGL 640
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 54/127 (42%), Gaps = 10/127 (7%)
Query: 280 GLYEMAK----------YVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEP 329
GLY+ AK Y I +T + ++I +CR LL+EM + G P
Sbjct: 359 GLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYP 418
Query: 330 ITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFF 389
+T++ ++ CK G A E++ ++ P+ + + I SC+VG F+
Sbjct: 419 DIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFY 478
Query: 390 NQMVKRG 396
M G
Sbjct: 479 AAMNLNG 485
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 49/108 (45%), Gaps = 5/108 (4%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
A++ ++ G E A +++++ R S + L+ C++ +FK +L + M
Sbjct: 916 AMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHY 975
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFI 373
+ + YN ++ C NG A + EE+ + P+ TY + +
Sbjct: 976 RVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLV 1023
Score = 38.1 bits (87), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 67/155 (43%), Gaps = 5/155 (3%)
Query: 243 KALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VS 297
KA K + + + + G S + + ++ + +S +G A +I KT K ++
Sbjct: 678 KAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLT 737
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
+NIL+ R D L MR+ G P LTY+ ++ LC +G ++L+
Sbjct: 738 TFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMF 797
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
+ + D +T+ + I C + D + + M
Sbjct: 798 IAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNM 832
>gi|242075962|ref|XP_002447917.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
gi|241939100|gb|EES12245.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
Length = 550
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 93/188 (49%), Gaps = 9/188 (4%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N++IK +CR +F+ +L+ M + GC P T+T+N ++ LC+ Q +LL L
Sbjct: 221 FNVVIKGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRR-L 279
Query: 359 GRN--CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
R+ C P+ +TY I C+ G+ + A + +N M++ G +P T+ I GY
Sbjct: 280 QRDGVCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALD 339
Query: 417 YEDA---YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
E A Y+ ++L + + +S L + + A + EM ++ ++PNV
Sbjct: 340 MESAVRMYRQLIL---RRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYT 396
Query: 474 YRRVLKHL 481
+ ++ L
Sbjct: 397 FSIIIHSL 404
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 4/127 (3%)
Query: 283 EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMR-QVGCEPITLTYNYVLGVL 341
EM ++ I+ V ++I+I +C++ L E+ + P T YN V+ +L
Sbjct: 384 EMGQHHIQP---NVYTFSIIIHSLCKQNRSAEALGFLRELNMRADIAPQTFIYNPVIDIL 440
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
CK GQ +A ++ +M + CHPD TY I I+ C G+ A F++MV+ G +P
Sbjct: 441 CKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVETGCRPDK 500
Query: 402 ATHAAFI 408
T +FI
Sbjct: 501 ITVNSFI 507
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 2/185 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVG-CEPITLTYNYVLGVLCKNGQDADACELLEEM 357
+NIL+ +CR DLL +++ G C P +TY V+ CK G+ DA + +M
Sbjct: 256 HNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDALSVYNDM 315
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
L P+ +TY + I + + A + Q++ R P + T ++ I GY +
Sbjct: 316 LESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRRCPPDVVTFSSLIDGYCRCGQL 375
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM-MKNGLRPNVSVYRR 476
+DA + + + +S++ K N A L E+ M+ + P +Y
Sbjct: 376 DDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFLRELNMRADIAPQTFIYNP 435
Query: 477 VLKHL 481
V+ L
Sbjct: 436 VIDIL 440
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 2/159 (1%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH-PDAITYEIFIVYS 376
LL + Q G YN +L +L G+ DA L E + + PD ++ + I
Sbjct: 169 LLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQDGLYSPDGWSFNVVIKGV 228
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV-VLSADKYKSSS 435
CRVG F A +M + G P TH + G + + + L D +
Sbjct: 229 CRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPN 288
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ Y+ + S + K A +V ++M+++G RPN Y
Sbjct: 289 VVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTY 327
>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Glycine max]
Length = 875
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 34/213 (15%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVG----------------------CEPITLTYNYV 337
NI++ +CR + +++ EM G C P +TY +
Sbjct: 472 NIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTL 531
Query: 338 LGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
+ LCK G+ +A + EML +N PD++TY+ FI C+ GK AF M + G
Sbjct: 532 INGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGC 591
Query: 398 QPRLATHAAFIKGY------FIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNN 451
L T+ A I G F Y +D K +S D + +N++ L K+
Sbjct: 592 SKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPD-ICTYNNIITCLCEGGKAKD-- 648
Query: 452 PVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTS 484
A ++L EM+ G+ PNVS ++ ++K S
Sbjct: 649 ---AISLLHEMLDKGISPNVSSFKILIKAFSKS 678
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 87/202 (43%), Gaps = 11/202 (5%)
Query: 265 LVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQ 324
++ R L+E +G ++ + YNI + + R + R +L EM
Sbjct: 308 MMGDARGLVETMKKVGNFD-----------SLECYNIWLMGLLRNGELLEARLVLDEMVA 356
Query: 325 VGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
G EP TYN ++ LC+N +DA L++ M+ +PD + Y + C GK
Sbjct: 357 KGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFE 416
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLAS 444
A + ++M++ G QP T + + R +A + + +K + +++ +
Sbjct: 417 AKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVN 476
Query: 445 LHDKNNNPVMAKNVLSEMMKNG 466
+N A ++SEM NG
Sbjct: 477 GLCRNGELDKASEIVSEMWTNG 498
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 84/205 (40%), Gaps = 39/205 (19%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +N+++K C+ R L+ M++VG YN L L +NG+ +A +L+
Sbjct: 293 VVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLD 352
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM+ + P+A TY I + CR A + M++ G+ P ++ + GY
Sbjct: 353 EMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGY---- 408
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV---- 471
S ++ AK+VL EM++NG +PN
Sbjct: 409 -----------------CSRGKVFE--------------AKSVLHEMIRNGCQPNTYTCN 437
Query: 472 SVYRRVLKHLHTSHQEHMAKCLSSR 496
++ + K T E M + ++ +
Sbjct: 438 TLLHSLWKEGRTLEAEEMLQKMNEK 462
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 68/156 (43%), Gaps = 7/156 (4%)
Query: 263 SCLVSGVR--ALIEMFSVLGLYEMAKY----VIKKTERKVSY-YNILIKEMCRRCDFKGP 315
+CL G+ LI +G E AK ++ K R S Y+ I C++
Sbjct: 520 NCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSA 579
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
+L +M + GC TYN ++ L N Q + L +EM + PD TY I
Sbjct: 580 FRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITC 639
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
C GK A + ++M+ +G+ P +++ IK +
Sbjct: 640 LCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAF 675
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 80/182 (43%), Gaps = 1/182 (0%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
EM++ G P TYN ++ LC+ G+ DA LL EML + P+ +++I I +
Sbjct: 620 EMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSS 679
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
F VA F ++ + A ++ + +A + +S D+Y + N +Y
Sbjct: 680 DFKVACELF-EVALNICGRKEALYSLMFNELLAGGQLSEAKELFEVSLDRYLTLKNFMYK 738
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSL 500
L + ++ A ++L +++ G + + + V+ L + A L+ R L
Sbjct: 739 DLIARLCQDERLADANSLLYKLIDKGYGFDHASFMPVIDGLSKRGNKRQADELAKRMMEL 798
Query: 501 SL 502
L
Sbjct: 799 EL 800
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 87/238 (36%), Gaps = 48/238 (20%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLT------------------------- 333
+N+LI +C F L +M Q GC P T
Sbjct: 153 FNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQALELVNNNN 212
Query: 334 ---------YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
YN ++ C+ + +A L+E M PD +T+ I CR GK
Sbjct: 213 SCRIANRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVME 272
Query: 385 AFNFFNQM---VKRGL-QPRLATHAAFIKGYFIFYRYEDAYKYV-----VLSADKYKSSS 435
A F M + GL +P + T +KG+ DA V V + D + +
Sbjct: 273 ASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYN 332
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
L LL +N + A+ VL EM+ G+ PN Y ++ L +H A+ L
Sbjct: 333 IWLMGLL-----RNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGL 385
>gi|297599210|ref|NP_001046823.2| Os02g0468500 [Oryza sativa Japonica Group]
gi|47497324|dbj|BAD19365.1| fertility restorer homologue A-like [Oryza sativa Japonica Group]
gi|125582052|gb|EAZ22983.1| hypothetical protein OsJ_06677 [Oryza sativa Japonica Group]
gi|255670892|dbj|BAF08737.2| Os02g0468500 [Oryza sativa Japonica Group]
Length = 506
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 94/190 (49%), Gaps = 10/190 (5%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGC---EPITLTYNYVLGVLCKNGQDADACELLE 355
YNILIK ++ D + EMR++ C P +TY+ ++G LC+ Q +A EL E
Sbjct: 195 YNILIKHYVKKGDLGTAFQVFDEMRKMNCADVRPSLVTYSTLIGGLCRGAQMKEAFELFE 254
Query: 356 EMLGRN-CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
+M+ ++ PD +TY + I CR+G+ + A + F M K +P +A I G+
Sbjct: 255 DMIEKDRIVPDQLTYNLLIGGFCRLGQVEKAQSIFGFMRKNECEPNAFNYATLINGHCKK 314
Query: 415 YRYEDA---YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
E A ++ ++ S + + S Y+ L ++ N N++ EM + G + +V
Sbjct: 315 GEVEAARGVFEEMIRSGVQPDAVS---YTSLVGCLCRHGNVDEGINLVQEMWQKGCKADV 371
Query: 472 SVYRRVLKHL 481
Y +L+ L
Sbjct: 372 VTYNLLLEGL 381
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 85/200 (42%), Gaps = 1/200 (0%)
Query: 283 EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM-RQVGCEPITLTYNYVLGVL 341
EM K + Y+ LI +CR K +L +M + P LTYN ++G
Sbjct: 217 EMRKMNCADVRPSLVTYSTLIGGLCRGAQMKEAFELFEDMIEKDRIVPDQLTYNLLIGGF 276
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
C+ GQ A + M C P+A Y I C+ G+ + A F +M++ G+QP
Sbjct: 277 CRLGQVEKAQSIFGFMRKNECEPNAFNYATLINGHCKKGEVEAARGVFEEMIRSGVQPDA 336
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
++ + + ++ V K + + Y+LL K+ A +L +
Sbjct: 337 VSYTSLVGCLCRHGNVDEGINLVQEMWQKGCKADVVTYNLLLEGLCKDRRIAEAVTLLEK 396
Query: 462 MMKNGLRPNVSVYRRVLKHL 481
+ G++ NV+ YR V+ L
Sbjct: 397 LPSEGVQLNVASYRIVMNCL 416
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 7/151 (4%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+GG C + ++ E+F + E + V + YN+LI CR + + +
Sbjct: 237 IGGLCRGAQMKEAFELFE--DMIEKDRIVPDQLT-----YNLLIGGFCRLGQVEKAQSIF 289
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
MR+ CEP Y ++ CK G+ A + EEM+ PDA++Y + CR
Sbjct: 290 GFMRKNECEPNAFNYATLINGHCKKGEVEAARGVFEEMIRSGVQPDAVSYTSLVGCLCRH 349
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
G D N +M ++G + + T+ ++G
Sbjct: 350 GNVDEGINLVQEMWQKGCKADVVTYNLLLEG 380
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 70/138 (50%), Gaps = 5/138 (3%)
Query: 272 LIEMFSVLGLYEMAKYV---IKKTERKVSYYN--ILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI F LG E A+ + ++K E + + +N LI C++ + + R + EM + G
Sbjct: 272 LIGGFCRLGQVEKAQSIFGFMRKNECEPNAFNYATLINGHCKKGEVEAARGVFEEMIRSG 331
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
+P ++Y ++G LC++G + L++EM + C D +TY + + C+ + A
Sbjct: 332 VQPDAVSYTSLVGCLCRHGNVDEGINLVQEMWQKGCKADVVTYNLLLEGLCKDRRIAEAV 391
Query: 387 NFFNQMVKRGLQPRLATH 404
++ G+Q +A++
Sbjct: 392 TLLEKLPSEGVQLNVASY 409
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ +CR + +L+ EM Q GC+ +TYN +L LCK+ + A+A LLE++
Sbjct: 339 YTSLVGCLCRHGNVDEGINLVQEMWQKGCKADVVTYNLLLEGLCKDRRIAEAVTLLEKLP 398
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ +Y I + C G+ + A M+ RG P A + G R
Sbjct: 399 SEGVQLNVASYRIVMNCLCSCGEMEKAAGLLGMMLGRGFVPHYAASNMLLIGLCDVGRVS 458
Query: 419 DA 420
DA
Sbjct: 459 DA 460
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 63/151 (41%), Gaps = 4/151 (2%)
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNC---HPDAITYEIFIVYSCRVGKFDV 384
+P T YN ++ K G A ++ +EM NC P +TY I CR +
Sbjct: 189 QPNTCIYNILIKHYVKKGDLGTAFQVFDEMRKMNCADVRPSLVTYSTLIGGLCRGAQMKE 248
Query: 385 AFNFFNQMVKRG-LQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
AF F M+++ + P T+ I G+ + E A + Y+ L
Sbjct: 249 AFELFEDMIEKDRIVPDQLTYNLLIGGFCRLGQVEKAQSIFGFMRKNECEPNAFNYATLI 308
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ H K A+ V EM+++G++P+ Y
Sbjct: 309 NGHCKKGEVEAARGVFEEMIRSGVQPDAVSY 339
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 50/123 (40%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K + V YN+L++ +C+ LL ++ G + +Y V+ LC G+
Sbjct: 365 KGCKADVVTYNLLLEGLCKDRRIAEAVTLLEKLPSEGVQLNVASYRIVMNCLCSCGEMEK 424
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A LL MLGR P + ++ C VG+ A +V G P A I+
Sbjct: 425 AAGLLGMMLGRGFVPHYAASNMLLIGLCDVGRVSDATVTLYGLVDTGFMPEARCWARLIE 484
Query: 410 GYF 412
F
Sbjct: 485 SVF 487
>gi|297842914|ref|XP_002889338.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335180|gb|EFH65597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 712
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 5/187 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N LI C+ + EM C P +TYN ++ LC+ G+ A LL ML
Sbjct: 215 FNTLISGFCKNSMVDQAFTIFKEMELYSCNPDVVTYNTIIDGLCRAGKVKIAHNLLNGML 274
Query: 359 GRN--CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
+ HP+ ++Y + C + D A F++M+ RGL+P T+ IKG +R
Sbjct: 275 KKATAVHPNIVSYTTLLRGYCMKQEIDEALLVFHEMLTRGLKPNAVTYNTLIKGLSEAHR 334
Query: 417 YEDAYKYVVLSADKYK--SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
Y D K ++ D + S +++L H + A V EM+ L P+ + Y
Sbjct: 335 Y-DEIKGFLIGGDAFTTFSPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASY 393
Query: 475 RRVLKHL 481
+++ L
Sbjct: 394 SVLIRTL 400
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 83/194 (42%), Gaps = 38/194 (19%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQV-GCEPITLTYNYVLGVLCKNGQDADACELL 354
V +N L+ + +R D+ EMR+ G P + T+N ++ CKN A +
Sbjct: 176 VLTFNSLLSILLKRGRTGMAHDMFDEMRRTYGVTPDSYTFNTLISGFCKNSMVDQAFTIF 235
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR--GLQPRLATHAAFIKGYF 412
+EM +C+PD +TY I CR GK +A N N M+K+ + P + ++ ++GY
Sbjct: 236 KEMELYSCNPDVVTYNTIIDGLCRAGKVKIAHNLLNGMLKKATAVHPNIVSYTTLLRGYC 295
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
+ ++A LL V EM+ GL+PN
Sbjct: 296 MKQEIDEA--------------------LL---------------VFHEMLTRGLKPNAV 320
Query: 473 VYRRVLKHLHTSHQ 486
Y ++K L +H+
Sbjct: 321 TYNTLIKGLSEAHR 334
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 81/190 (42%), Gaps = 8/190 (4%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM- 357
+NILIK C + EM + P + +Y+ ++ LC + A L E+
Sbjct: 358 FNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCLRNEFDKAETLFNELF 417
Query: 358 -----LGRN-CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
LG+N C P A Y + Y C GK A F Q++KRG Q +++ I G
Sbjct: 418 EKEVLLGKNECKPLAAAYNLMFEYLCANGKAKQAEKVFRQLMKRGAQDP-SSYRTLITGL 476
Query: 412 FIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
+++ AY+ +VL + Y +L K ++A + L M+++ P
Sbjct: 477 CREGKFKAAYELLVLMLRREFVPDPETYEVLIDGLLKIGEALLAHDTLQRMLRSSYLPVA 536
Query: 472 SVYRRVLKHL 481
+ + VL L
Sbjct: 537 TTFHSVLAEL 546
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGC-EPITLTYNYVLGVLCKNGQDADACELLEEM 357
YN LIK + + + L+ P T+N ++ C G A ++ +EM
Sbjct: 322 YNTLIKGLSEAHRYDEIKGFLIGGDAFTTFSPDACTFNILIKAHCDAGHLDAAMKVFQEM 381
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR 395
L HPD+ +Y + I C +FD A FN++ ++
Sbjct: 382 LNMKLHPDSASYSVLIRTLCLRNEFDKAETLFNELFEK 419
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 63/144 (43%)
Query: 286 KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNG 345
+ ++K+ + S Y LI +CR FK +LLV M + P TY ++ L K G
Sbjct: 456 RQLMKRGAQDPSSYRTLITGLCREGKFKAAYELLVLMLRREFVPDPETYEVLIDGLLKIG 515
Query: 346 QDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
+ A + L+ ML + P A T+ + + + +F M+++ ++ +
Sbjct: 516 EALLAHDTLQRMLRSSYLPVATTFHSVLAELVKRKFANDSFGLLTVMLEKRIRQNIDLST 575
Query: 406 AFIKGYFIFYRYEDAYKYVVLSAD 429
++ F + E A+ V L D
Sbjct: 576 QAVRLVFSSAQKEKAFLIVRLLYD 599
>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Cucumis sativus]
Length = 1079
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 94/200 (47%), Gaps = 7/200 (3%)
Query: 266 VSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLV 320
VS LI + V G + A ++ ER + YN L+ C++ FK L+
Sbjct: 175 VSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIH 234
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
M G + TYN + LC+N + A +L++M + P+ ++Y I + G
Sbjct: 235 HMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEG 294
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV-VLSADKYKSSSNMLY 439
K VA FN+M++ L P L T+ I GY I +E+A + + V+ A+ + + +
Sbjct: 295 KIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIG 354
Query: 440 SLLASLHDKNNNPVMAKNVL 459
+LL L+ V A+N+L
Sbjct: 355 TLLNGLYKSAKFDV-ARNIL 373
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 125/335 (37%), Gaps = 45/335 (13%)
Query: 184 MREIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSK 243
+R P Y + I + ++ NC + +Q+L +VC N +F L ++ +
Sbjct: 133 IRGFKPSVYTCNMIMASMVKNCRAHLVWSFFKQMLTS----RVCPNVSSFNILISVLCVQ 188
Query: 244 ALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSY 298
KK + ++ ++ + G + L+ G ++ A +I E K V
Sbjct: 189 GKLKKAV-NILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCT 247
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+ I +CR +L +MR P ++YN ++ K G+ A + EM+
Sbjct: 248 YNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMI 307
Query: 359 GRNCHPDAITYEIFIVYSCRVG-----------------------------------KFD 383
N P+ ITY I I C G KFD
Sbjct: 308 ELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFD 367
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
VA N + +H I G ++A++ ++ + +S+L
Sbjct: 368 VARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLI 427
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ K N AK V+S++ + G PN ++ ++
Sbjct: 428 NGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLI 462
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 91/242 (37%), Gaps = 35/242 (14%)
Query: 279 LGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
LG+ + ++ + + +N+LI++ C D DL M T V
Sbjct: 789 LGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVT 848
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
VL + + + EML + P + Y + CRVG AF +QMV G+
Sbjct: 849 DVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGIS 908
Query: 399 PRLATHAAFIKGYFIFYRYEDAY---------------------KYVVLSADKYKSSSNM 437
A A ++G + + E+A +V D +K + N+
Sbjct: 909 LDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNL 968
Query: 438 --------------LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHT 483
Y++L S N + + A + E+ + GL PN++ YR ++ + T
Sbjct: 969 KILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAIST 1028
Query: 484 SH 485
H
Sbjct: 1029 KH 1030
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+K +C+ +F R LL ++ + T++YN ++ + K+G +A L EEM+
Sbjct: 563 YGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMI 622
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQ-MVKRGLQPRLATHAAFIKGYF 412
N PD+ TY + R G+ AF F + M K L + FI G F
Sbjct: 623 QNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLF 677
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 10/127 (7%)
Query: 280 GLYEMAK----------YVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEP 329
GLY+ AK Y I +T + ++I +CR LL+EM + G P
Sbjct: 359 GLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHP 418
Query: 330 ITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFF 389
+T++ ++ CK G A E++ ++ P+ + + I SC+VG A F+
Sbjct: 419 DIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFY 478
Query: 390 NQMVKRG 396
M G
Sbjct: 479 AAMNLNG 485
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 89/216 (41%), Gaps = 5/216 (2%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERKV-----SYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
LI F +G AK V+ K R+ ++ LI C+ + M
Sbjct: 425 VLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLN 484
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G T N ++ LC+NG+ +A E L + P+++T++ I VG A
Sbjct: 485 GQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGA 544
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
F+ F++M+ G P T+ + +K + +A K + + + Y+ L
Sbjct: 545 FSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVE 604
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K+ N + A + EM++N + P+ Y +L L
Sbjct: 605 ISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGL 640
Score = 41.6 bits (96), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 49/108 (45%), Gaps = 5/108 (4%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
A++ ++ G E A +++++ R S + L+ C++ +FK +L + M
Sbjct: 916 AMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHY 975
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFI 373
+ + YN ++ C NG A + EE+ + P+ TY + +
Sbjct: 976 RVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLV 1023
>gi|255660942|gb|ACU25640.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 484
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 63/133 (47%)
Query: 292 TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADAC 351
ER + Y+ L K + RR + + +M G EP T+N ++ +G+ A
Sbjct: 111 VERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMMWGFFLSGKVETAN 170
Query: 352 ELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
E+M R PD +TY + CRV K + A +F +M R ++P + T+ IKGY
Sbjct: 171 RFFEDMKSREIMPDVVTYNTMVNGYCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230
Query: 412 FIFYRYEDAYKYV 424
R +DA + V
Sbjct: 231 VSVDRVDDALRLV 243
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 11/209 (5%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L EM + I T+ S + LI C+ D ++L M ++ Y ++
Sbjct: 278 LKEMVEKYIAPTDN--SIFMRLISGQCKAGDLDAAANVLKAMIRLSVPTEAGHYGVLIEN 335
Query: 341 LCKNGQDADACELLEEMLGRNC--------HPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
CK G+ A +LL++++ ++ H ++ Y I Y C G+ A Q+
Sbjct: 336 YCKAGEYDKAIKLLDKVIEKDIILRPQSTLHMESSAYNPLIEYLCNNGQTAKAEALVRQL 395
Query: 393 VKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNP 452
+K G+Q A + I+G+ + A++ + + + S Y L + K N P
Sbjct: 396 MKLGVQDPTALNT-LIRGHSQEGSPDSAFELLKIMLRRKVDSEQSSYDSLVQSYLKKNEP 454
Query: 453 VMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
AK L M++NG P+ S++R V++ L
Sbjct: 455 ADAKAALDSMIENGHLPDSSLFRSVMESL 483
>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62914, mitochondrial; Flags: Precursor
gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats. EST gb|AA728420 comes from this gene
[Arabidopsis thaliana]
gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 528
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%)
Query: 279 LGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
L L + K K E V Y+ +I +C+ +L EM G P +TY+ ++
Sbjct: 236 LALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 295
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
LC G+ +DA LL +M+ R +P+ +T+ I + GK A + +M+KR +
Sbjct: 296 SCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSID 355
Query: 399 PRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNV 458
P + T+++ I G+ + R +A + + L K + + Y+ L + K +
Sbjct: 356 PNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMEL 415
Query: 459 LSEMMKNGLRPNVSVYRRVL 478
EM + GL N Y ++
Sbjct: 416 FREMSQRGLVGNTVTYTTLI 435
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L+ M Q GC+P +TY V+ LCK G A LL +M + + Y I C
Sbjct: 205 LIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLC 264
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ D A N F +M +G++P + T+++ I + R+ DA + + ++ + + +
Sbjct: 265 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLV 324
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+S L K V A+ + EM+K + PN+ Y
Sbjct: 325 TFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTY 361
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 85/178 (47%), Gaps = 4/178 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNILI CR LL +M ++G EP +T N +L C + +DA L+++M+
Sbjct: 116 YNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMV 175
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD +T+ I K A ++MV+RG QP L T+ A + G + R +
Sbjct: 176 EMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNG--LCKRGD 233
Query: 419 DAYKYVVLSA-DKYKSSSN-MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+L+ + K +N ++YS + K + A N+ +EM G+RPNV Y
Sbjct: 234 TDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 291
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ++ +C+R D +LL +M E + Y+ V+ LCK + DA L EM
Sbjct: 221 YGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 280
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
+ P+ ITY I C G++ A + M++R + P L T +A I +
Sbjct: 281 NKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAF 333
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 88/203 (43%), Gaps = 6/203 (2%)
Query: 293 ERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
ERK++ ++ LI ++ L EM + +P TY+ ++ C +
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLG 375
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
+A ++LE M+ ++C P+ +TY I C+ + D F +M +RGL T+ I
Sbjct: 376 EAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLI 435
Query: 409 KGYFIFYRYEDAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
G+F R D + V N+L Y++L KN A V + ++ +
Sbjct: 436 HGFFQ-ARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 494
Query: 468 RPNVSVYRRVLKHLHTSHQEHMA 490
P++ Y +++ + + + M
Sbjct: 495 EPDIYTYNIMIEGMCKAGKWKMG 517
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 43/91 (47%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI + D + + +M VG P LTYN +L LCKNG+ A A + E +
Sbjct: 431 YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ 490
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFF 389
PD TY I I C+ GK+ + +F
Sbjct: 491 RSTMEPDIYTYNIMIEGMCKAGKWKMGGIYF 521
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 7/166 (4%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
+LI F +L AK +++ RK V YN LI C+ +L EM Q
Sbjct: 363 SLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQR 422
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELL-EEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
G T+TY ++ + +D D +++ ++M+ HP+ +TY I + C+ GK
Sbjct: 423 GLVGNTVTYTTLIHGFFQ-ARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAK 481
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADK 430
A F + + ++P + T+ I+G +++ Y V SA K
Sbjct: 482 AMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYFVASALK 527
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 69/170 (40%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M +G TYN ++ C+ + + A LL +M+ PD +T + C
Sbjct: 103 KMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGN 162
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+ A +QMV+ G +P T I G F+ + +A + + + Y
Sbjct: 163 RISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYG 222
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
+ + K + +A N+L++M + NV +Y V+ L E A
Sbjct: 223 AVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 272
>gi|255661012|gb|ACU25675.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 376
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 103/226 (45%)
Query: 282 YEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+E+ + + ++ R V+ +NI+++ + +L M++ G ++TY ++
Sbjct: 45 FELWEMMGREGSRSVASFNIMMRGLFDNGKVDEVISILELMKKSGFIEDSITYGILVHGF 104
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
CKNG + +LE + DA Y I C+ K D A + N M+K G +P
Sbjct: 105 CKNGYINKSLHVLEIAERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNA 164
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
+ A I G ++EDA + V S + + YS L + K A +++ E
Sbjct: 165 HVYNALINGLVGASKFEDAVRVVREMGTTNCSPTLVTYSTLINGLCKVERFGEAYDLVKE 224
Query: 462 MMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSVE 507
M++ GL P+V Y ++K L H+ MA L ++ +S V+
Sbjct: 225 MLZKGLNPSVITYSLLMKGLCLGHKVEMALQLXNQVTSKGFKPDVQ 270
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 92/184 (50%), Gaps = 2/184 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI + F+ ++ EM C P +TY+ ++ LCK + +A +L++EML
Sbjct: 167 YNALINGLVGASKFEDAVRVVREMGTTNCSPTLVTYSTLINGLCKVERFGEAYDLVKEML 226
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ +P ITY + + C K ++A NQ+ +G +P + H I G + +
Sbjct: 227 ZKGLNPSVITYSLLMKGLCLGHKVEMALQLXNQVTSKGFKPDVQMHNILIHGLCSVGKTQ 286
Query: 419 DAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
A + L +++ + N++ ++ L K+++ A + + +++NGL+P++ Y
Sbjct: 287 LAL-LLYLDMNRWNCAPNLVTHNTLMEGFYKDDDIRNALVIWARILRNGLQPDIISYNIT 345
Query: 478 LKHL 481
LK L
Sbjct: 346 LKGL 349
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 91/217 (41%), Gaps = 5/217 (2%)
Query: 274 EMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLT 333
E+ S+L L + + ++ E ++Y IL+ C+ +L + G
Sbjct: 77 EVISILELMKKSGFI----EDSITY-GILVHGFCKNGYINKSLHVLEIAERKGGVLDAFA 131
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
Y+ ++ LCK + A +L M+ C P+A Y I KF+ A +M
Sbjct: 132 YSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNALINGLVGASKFEDAVRVVREMG 191
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPV 453
P L T++ I G R+ +AY V +K + S + YSLL +
Sbjct: 192 TTNCSPTLVTYSTLINGLCKVERFGEAYDLVKEMLZKGLNPSVITYSLLMKGLCLGHKVE 251
Query: 454 MAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
MA + +++ G +P+V ++ ++ L + + +A
Sbjct: 252 MALQLXNQVTSKGFKPDVQMHNILIHGLCSVGKTQLA 288
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 64/161 (39%), Gaps = 35/161 (21%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ LI +C+ F DL+ EM Z G P +TY+ ++ LC + A +L ++
Sbjct: 202 YSTLINGLCKVERFGEAYDLVKEMLZKGLNPSVITYSLLMKGLCLGHKVEMALQLXNQVT 261
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAF------NFFN---------------------- 390
+ PD + I I C VGK +A N +N
Sbjct: 262 SKGFKPDVQMHNILIHGLCSVGKTQLALLLYLDMNRWNCAPNLVTHNTLMEGFYKDDDIR 321
Query: 391 -------QMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV 424
++++ GLQP + ++ +KG R DA ++
Sbjct: 322 NALVIWARILRNGLQPDIISYNITLKGLCSCNRISDAILFL 362
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 47/108 (43%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +NILI +C + L ++M + C P +T+N ++ K+ +A +
Sbjct: 269 VQMHNILIHGLCSVGKTQLALLLYLDMNRWNCAPNLVTHNTLMEGFYKDDDIRNALVIWA 328
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
+L PD I+Y I + C + A F + V + + P + T
Sbjct: 329 RILRNGLQPDIISYNITLKGLCSCNRISDAILFLHDAVTKKIVPTIIT 376
>gi|356518400|ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Glycine max]
Length = 546
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 88/188 (46%), Gaps = 2/188 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCE-PITLTYNYVLGVLCKNGQDADACELL 354
V +NIL+K C+ D +++ EMR P +TY+ ++ LC+NG+ +A +L
Sbjct: 233 VCVFNILVKYHCKNGDLDSAFEIVEEMRNSEFSYPNLVTYSTLMDGLCRNGRVKEAFDLF 292
Query: 355 EEMLGRN-CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
EEM+ R+ PD +TY + I CR GK D A N M G P + ++A + G
Sbjct: 293 EEMVSRDHIVPDPLTYNVLINGFCRGGKPDRARNVIQFMKSNGCYPNVYNYSALVDGLCK 352
Query: 414 FYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
+ EDA + + Y+ L + +N A +L EM +NG + +
Sbjct: 353 VGKLEDAKGVLAEIKGSGLKPDAVTYTSLINFLCRNGKSDEAIELLEEMKENGCQADSVT 412
Query: 474 YRRVLKHL 481
+ +L L
Sbjct: 413 FNVLLGGL 420
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERKVSYYNI-----LIKEMCRRCDFKGPRDLLVEMRQV 325
LI F G + A+ VI+ + Y N+ L+ +C+ + + +L E++
Sbjct: 310 VLINGFCRGGKPDRARNVIQFMKSNGCYPNVYNYSALVDGLCKVGKLEDAKGVLAEIKGS 369
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G +P +TY ++ LC+NG+ +A ELLEEM C D++T+ + + CR GKF+ A
Sbjct: 370 GLKPDAVTYTSLINFLCRNGKSDEAIELLEEMKENGCQADSVTFNVLLGGLCREGKFEEA 429
Query: 386 FNFFNQMVKRGL 397
+ ++ ++G+
Sbjct: 430 LDMVEKLPQQGV 441
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+LI CR R+++ M+ GC P Y+ ++ LCK G+ DA +L E+
Sbjct: 308 YNVLINGFCRGGKPDRARNVIQFMKSNGCYPNVYNYSALVDGLCKVGKLEDAKGVLAEIK 367
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
G PDA+TY I + CR GK D A +M + G Q T + G ++E
Sbjct: 368 GSGLKPDAVTYTSLINFLCRNGKSDEAIELLEEMKENGCQADSVTFNVLLGGLCREGKFE 427
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A V + + Y ++ + + AK +L M++ G +P+ + +L
Sbjct: 428 EALDMVEKLPQQGVYLNKGSYRIVLNSLTQKCELKRAKELLGLMLRRGFQPHYATSNELL 487
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Query: 280 GLYEMAKYVIKKTERKVSY-----YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
G +E A +++K ++ Y Y I++ + ++C+ K ++LL M + G +P T
Sbjct: 424 GKFEEALDMVEKLPQQGVYLNKGSYRIVLNSLTQKCELKRAKELLGLMLRRGFQPHYATS 483
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
N +L LCK G DA L +++ P T+E+ I CR K F +++V
Sbjct: 484 NELLVCLCKAGMVDDAAVALFDLVEMGFQPGLETWEVLIGLICRERKLLYVFELLDELV 542
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 49/110 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N+L+ +CR F+ D++ ++ Q G +Y VL L + + A ELL ML
Sbjct: 413 FNVLLGGLCREGKFEEALDMVEKLPQQGVYLNKGSYRIVLNSLTQKCELKRAKELLGLML 472
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
R P T +V C+ G D A +V+ G QP L T I
Sbjct: 473 RRGFQPHYATSNELLVCLCKAGMVDDAAVALFDLVEMGFQPGLETWEVLI 522
>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 892
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 86/193 (44%), Gaps = 17/193 (8%)
Query: 243 KALTKKGI----WRVVEVL---NQ-VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTER 294
K L K G+ WR+++ L NQ + C + + L + G+ + A V K+ +
Sbjct: 253 KGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQG----GILDEASEVFKEMKN 308
Query: 295 -----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
V Y+ILI CR+ ++ EMR G P +Y+ ++ CK G+
Sbjct: 309 SGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDK 368
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A E+ EEM PD +Y I I CR G D A F+ +M P + + IK
Sbjct: 369 ALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIK 428
Query: 410 GYFIFYRYEDAYK 422
GY+ ++ +A K
Sbjct: 429 GYYKSKQFANALK 441
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 8/170 (4%)
Query: 250 IWRVVEVLNQV---GGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSY-----YNI 301
I R E+L ++ G + V I+ +GL+ +A +I+ RK +N
Sbjct: 226 IRRASEILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNA 285
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
+I +C+ ++ EM+ G P +Y+ ++ C+ G+ A E+ +EM
Sbjct: 286 VIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSG 345
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
P+ +Y I I C+ G+ D A F +M G+ P + +++ I G+
Sbjct: 346 ILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGF 395
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 74/177 (41%), Gaps = 1/177 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ LI +R + + L ++M +VG TY ++ + + + A L + M
Sbjct: 528 YSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMK 587
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+PD I Y + C G+ A F++M + G P + T+ FI Y +
Sbjct: 588 ESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNN 647
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNG-LRPNVSVY 474
A+K ++ +LY++L + A+ + EM + G PNV +Y
Sbjct: 648 QAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMY 704
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 82/197 (41%), Gaps = 19/197 (9%)
Query: 219 NDFNVYQVC---LNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVS-GVRALIE 274
N+F ++++C + EKA LPV++ L +V+N S L+S + L
Sbjct: 494 NEF-IHRICRGSVPEKALQLLPVMLKRNVLP--------DVVNY---STLISCFAKRLNS 541
Query: 275 MFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
+V+ +M K I V Y ILI C L M++ P + Y
Sbjct: 542 EKAVMLFIKMTKVGIT---FNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAY 598
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
++ C G+ A L +EM C P+ +TY FI ++ K + A + +M +
Sbjct: 599 TSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKE 658
Query: 395 RGLQPRLATHAAFIKGY 411
RG+ P + I +
Sbjct: 659 RGVYPDQILYTMLIAAF 675
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 68/170 (40%), Gaps = 4/170 (2%)
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
CR+ DF L + ++ G +YN + +C+ A +LL ML RN PD
Sbjct: 466 CRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDV 525
Query: 367 ITYEIFIVYSCRVGKF--DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV 424
+ Y I SC + + A F +M K G+ + T+ I + + + AY+
Sbjct: 526 VNYSTLI--SCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLF 583
Query: 425 VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + Y+ L + A+ + EM + G PNV Y
Sbjct: 584 KGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTY 633
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 83/185 (44%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
+ + +++ + + K R++ +M + G P + YN ++ L K G +A ++L+
Sbjct: 226 ALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDN 285
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
ML + C P +TY I + C+ G + A F M G +P + + I G+ R
Sbjct: 286 MLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGR 345
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
++A + + ++++ K+ N A EMM+ G +PNV Y
Sbjct: 346 MKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTT 405
Query: 477 VLKHL 481
+++ L
Sbjct: 406 IIQGL 410
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 82/183 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y IL+ +C+ + +L M G P ++ Y ++ K+G+ +AC L +EM+
Sbjct: 298 YGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMV 357
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD IT+ + I C+ G F+ A F +M++ G +P + T+ I+G R
Sbjct: 358 EAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVA 417
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A++ + ++ Y L K A +L E+ K PN+ +Y ++
Sbjct: 418 NAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLV 477
Query: 479 KHL 481
L
Sbjct: 478 NGL 480
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 64/130 (49%), Gaps = 2/130 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRD--LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACEL 353
+ YNILI +CR + + R LL ++ +VG P +TY + LCK G+ A ++
Sbjct: 541 ATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKM 600
Query: 354 LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
LEE R + D + Y C G+ D A + F +MV++G P A + I G
Sbjct: 601 LEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIK 660
Query: 414 FYRYEDAYKY 423
+ EDA K+
Sbjct: 661 VKKLEDACKF 670
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 82/196 (41%), Gaps = 9/196 (4%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y L +C + L EM + G P Y ++ L K + DAC+ +
Sbjct: 613 VVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFD 672
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG-LQPRLATHAAFIKGYFIF 414
EM+G+ P TY + C G D AF+ F M+ RG L + + A I G+
Sbjct: 673 EMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKA 732
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLL-ASLHD---KNNNPVMAKNVLSEMMKNGLRPN 470
+ + A K + S N+ ++ ASL D ++ A+ +L EM G P+
Sbjct: 733 LKVDAALKLF----EDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPH 788
Query: 471 VSVYRRVLKHLHTSHQ 486
+ + +L L S +
Sbjct: 789 AATFTAILDGLRKSDE 804
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 92/212 (43%), Gaps = 10/212 (4%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
L++ F LG + A ++ + ++ + Y+ L+ +C + D L E +
Sbjct: 441 LLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAA 500
Query: 327 CEPIT--LTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV--GKF 382
E + L + ++G LCK G+ +AC + + M+ C PDA TY I I CR +
Sbjct: 501 AETLDPGLCCSIIVG-LCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRV 559
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
+ AF + + K G P T+ G + A K + ++ + ++ + Y+ L
Sbjct: 560 ERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTAL 619
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ A ++ EM++ G P+ + Y
Sbjct: 620 CTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAY 651
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 7/177 (3%)
Query: 251 WRVVEVLNQVG---GSCLVSGVRALIEMFSVLGL-YEMAKYVIKKT--ERKVSYYNILIK 304
W V + N +G G L S V A++ V G ++ ++ + V YN L+
Sbjct: 68 WSVHNIRNVLGPVHGQVLGSHVAAVLRSLKVTGTAISFFRWAGEQAGFQHDVFTYNCLMN 127
Query: 305 EMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHP 364
+ ++ + EM + G P T ++N ++ + + DA E M + C P
Sbjct: 128 LLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKP 187
Query: 365 DAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG-LQPRLATHAAFIKGYFIFYRYEDA 420
D T+ I + C+ G + AF F++M+ G + P A H A ++ R ++A
Sbjct: 188 DLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEA 244
>gi|410109953|gb|AFV61056.1| pentatricopeptide repeat-containing protein 11, partial [Nashia
inaguensis]
Length = 431
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 84/183 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ +L EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 212 VYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIXGHCKNGRVDLAMEIYK 271
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
ML ++ PD ITY I C+ G A ++M +GL+P T+ I G
Sbjct: 272 XMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEMSMKGLKPDKFTYTTLIDGCCKEG 331
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ A+K+ ++ Y+ L S + V A+ +L EM+ GL+P++ Y
Sbjct: 332 DLDTAFKHRKRMIQGNIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYT 391
Query: 476 RVL 478
++
Sbjct: 392 MII 394
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 76/181 (41%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ C+ D + + + + + G P ++YN ++ + G + L M
Sbjct: 144 FFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAM 203
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
L PD TY + I C+ K D A F++M+ +GL P T I G+ R
Sbjct: 204 LASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIXGHCKNGRV 263
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ A + + + Y+ L K + A ++ EM GL+P+ Y +
Sbjct: 264 DLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEMSMKGLKPDKFTYTTL 323
Query: 478 L 478
+
Sbjct: 324 I 324
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI+ C ++L+ E+ G + ++ ++ LCK G+ DA + + +
Sbjct: 470 YNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTV 529
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
HPDA+ Y + + C VGK + A F+ MV G++P + + + GY R +
Sbjct: 530 NVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRID 589
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ + S +LYS++ + V AK EM ++G+ ++ Y VL
Sbjct: 590 EGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVL 649
Query: 479 KHL 481
+ L
Sbjct: 650 RGL 652
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 5/215 (2%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI +S G ++ A V K+ R V ++L+ +C+ K RD+ M G
Sbjct: 298 LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKG 357
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
P +YN +L G D +L + MLG PD T+ + I G D A
Sbjct: 358 QNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAM 417
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
FN+M G++P + T+ I + +DA + D+ + Y+ L
Sbjct: 418 IIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGF 477
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + + AK ++SE+M NG+ ++ + ++ +L
Sbjct: 478 CTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNL 512
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 82/188 (43%), Gaps = 4/188 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVG--CEPITLTYNYVLGVLCKNGQDADACELLEE 356
Y+IL+K +C + DLL M + G C P + YN V+ K G AC+L +E
Sbjct: 188 YSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKE 247
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
M+ R PD +TY + C+ D A F QMV + + P T+ I GY +
Sbjct: 248 MVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQ 307
Query: 417 YEDAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+++A + + + L L+ SL K A++V M G P+V Y
Sbjct: 308 WKEAVRVFKEMRRHSILPDVVTLSMLMGSLC-KYGKIKEARDVFDTMAMKGQNPDVFSYN 366
Query: 476 RVLKHLHT 483
+L T
Sbjct: 367 IMLNGYAT 374
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 2/156 (1%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML--GRNCHPDAITYEIFIVY 375
LL ++GC P +Y+ +L LC G+ A +LL M G C P+ + Y I
Sbjct: 172 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG 231
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
+ G + A + F +MV+RG+ P L T+ + + + A ++ +K +
Sbjct: 232 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 291
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
N Y+ L + A V EM ++ + P+V
Sbjct: 292 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDV 327
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 89/229 (38%), Gaps = 51/229 (22%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK------------ 343
V YN +I + D DL EM Q G P +TYN V+ LCK
Sbjct: 222 VVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLR 281
Query: 344 -----------------------NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
GQ +A + +EM + PD +T + + C+ G
Sbjct: 282 QMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYG 341
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI---FYRYEDAYKYVV---LSADKYKSS 434
K A + F+ M +G P + ++ + GY D + ++ ++ D Y +
Sbjct: 342 KIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFY--T 399
Query: 435 SNMLYSLLA--SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
N+L A + DK A + +EM +G++P+V YR V+ L
Sbjct: 400 FNVLIKAYANCGMLDK------AMIIFNEMRDHGVKPDVVTYRTVIAAL 442
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 83/220 (37%), Gaps = 8/220 (3%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
G CLV + + +F + V E V Y L+ C+ L E
Sbjct: 546 GYCLVGKMEKALRVFDAM--------VSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFRE 597
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M Q G +P T+ Y+ ++ L + G+ A EM D TY I + +
Sbjct: 598 MLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRC 657
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
FD A F ++ ++ + T I G F R E+A + S + YS+
Sbjct: 658 FDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSI 717
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + K A+++ S M G PN + V++ L
Sbjct: 718 MITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVREL 757
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 81/184 (44%), Gaps = 2/184 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+L+ C + + M G EP + Y ++ CK G+ + L EML
Sbjct: 540 YNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREML 599
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R P I Y I I G+ A F++M + G+ + T+ ++G F ++
Sbjct: 600 QRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFD 659
Query: 419 DA-YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+A + + L A K + L +++ + + AK++ + + ++ L P+V Y +
Sbjct: 660 EAIFLFKELRAMNVKINIITLNTMIDGMF-QTRRVEEAKDLFASISRSRLVPSVVTYSIM 718
Query: 478 LKHL 481
+ +L
Sbjct: 719 ITNL 722
>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
Length = 991
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 83/184 (45%), Gaps = 3/184 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V + LI +C+ R L M Q G P +TYN ++ K G+ DA ++ E
Sbjct: 288 VRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKE 347
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M CHPD TY I C K + A N VK G P + T I GY +
Sbjct: 348 LMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAE 406
Query: 416 RYEDAYKYV-VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+++DA + + + K K + L+ SL K + AK +L+E+ NGL PNV Y
Sbjct: 407 KFDDALRMKNKMMSSKCKLDLQVFGKLINSLI-KKDRLKEAKELLNEISANGLVPNVITY 465
Query: 475 RRVL 478
++
Sbjct: 466 TSII 469
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 78/186 (41%), Gaps = 3/186 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y +I C+ ++L M + GC+P TYN ++ L K+ + A LL
Sbjct: 462 VITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLT 521
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M P+ ITY + C FD AF F M + GL+P +A
Sbjct: 522 KMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG 581
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R E+AY ++V K + + + Y+ L K N A ++ M+ G P+ Y
Sbjct: 582 RAEEAYSFIV---RKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYS 638
Query: 476 RVLKHL 481
+L L
Sbjct: 639 VLLHAL 644
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 76/184 (41%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
YY LI + + L+ M GC P + TY+ +L LCK + +A +L++M
Sbjct: 601 YYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQM 660
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
R Y I I R GK D A +N+M G +P T+ FI Y R
Sbjct: 661 SLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRL 720
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
EDA ++ + + + Y++L A + L M+ PN Y +
Sbjct: 721 EDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLL 780
Query: 478 LKHL 481
LKHL
Sbjct: 781 LKHL 784
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 107/253 (42%), Gaps = 24/253 (9%)
Query: 247 KKGIWRVVEVLNQV---GGSCLVSGVRALIEMFSVLGLYEMAKYVIKKT-----ERKVSY 298
+K + + +L+Q+ G C + LI+ G ++ AK + + + +
Sbjct: 647 QKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATT 706
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y + I C+ + DL+++M + G P +TYN ++ G A L+ M+
Sbjct: 707 YTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMV 766
Query: 359 GRNCHPDAITYEIFIVYSCR----------------VGKFDVAFNFFNQMVKRGLQPRLA 402
G +C P+ TY + + + + + + D+ + +MVK GL P +
Sbjct: 767 GASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVT 826
Query: 403 THAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM 462
T+++ I G+ R E+A + K S + +Y+LL A + +S M
Sbjct: 827 TYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIM 886
Query: 463 MKNGLRPNVSVYR 475
+ G +P + YR
Sbjct: 887 SECGFQPQLESYR 899
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
LL M + G P TY+ ++ CK G+ +AC LL+ M G+ P+ Y + I C
Sbjct: 812 LLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCC 871
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
F+ A +F + M + G QP+L ++ + G
Sbjct: 872 DTKFFEKALSFVSIMSECGFQPQLESYRLLVVG 904
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 3/180 (1%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N L+ CR + + L + M +GC+ +Y ++ LC+ +A L M
Sbjct: 222 NALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKR 281
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
C P+ + I C+ G+ A F+ M + G+ P + T+ A I GY R D
Sbjct: 282 DGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMND 341
Query: 420 AYKYVVLSADKYKSSSNMLY-SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A K L + Y +L+ L D+ A+ +L+ +K G P V + ++
Sbjct: 342 ALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEE--AEELLNNAVKEGFTPTVVTFTNLI 399
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 63/158 (39%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
++ Q G P T+TYN ++ CK G A +L P+ T ++ CR G
Sbjct: 173 QLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTG 232
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+ A F M G Q ++ I+G +A ++ S + ++
Sbjct: 233 ELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFT 292
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
L S K+ A+ + M +NG+ P+V Y ++
Sbjct: 293 FLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 330
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 12/159 (7%)
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
C P ++Y+ ++ LCK G+ +A + EM+G+N PD+ Y++FI C+ GK AF
Sbjct: 429 CMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAF 488
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGY------FIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
M K+G L T+ + I G F Y D + +S D +N+L S
Sbjct: 489 RVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPD-VSIYNNVLSS 547
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
L K+ A +VL EM++ G+ PN+S + ++K
Sbjct: 548 LCEGGRVKD-----APSVLDEMLQKGISPNISSFSILIK 581
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 87/191 (45%), Gaps = 12/191 (6%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ IL++ CR +LL EMR++G P + YN ++ CK G+ DA +L++EM
Sbjct: 94 FGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMR 153
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR---GL-QPRLATHAAFIKGYFIF 414
PD +T+ I C GK A F M GL QP + T+ + G+
Sbjct: 154 KDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKE 213
Query: 415 YRYEDAYKYVVLSADKYKSSSNML----YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
E+A +K K S N++ Y++ + + A+ VL EM+ G+ PN
Sbjct: 214 GMLEEARALF----EKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPN 269
Query: 471 VSVYRRVLKHL 481
V Y V+ L
Sbjct: 270 VYSYNIVMDGL 280
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N+LI +C R+L +M + GCEP ++ ++ C+ G + ELL EM
Sbjct: 59 FNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMR 118
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
P+ + Y I C+ GK D A ++M K GL P + T A I
Sbjct: 119 RLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARI 168
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 299 YNILIKEMCRRCDFKGPRD----LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
YN+L+ R C +G D L +M G P T T+N ++G+LC +G DA EL
Sbjct: 24 YNVLL----RSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDARELF 79
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
++M + C P+ ++ I + CR G +M + G P + I +
Sbjct: 80 DKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKE 139
Query: 415 YRYEDAYKYV 424
+ +DA K V
Sbjct: 140 GKTDDAEKLV 149
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 58/127 (45%), Gaps = 9/127 (7%)
Query: 280 GLYEMAKYVIKKTERKVSY-------YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITL 332
G+ E A+ + +K KVS YNI + + R + +L EM +G EP
Sbjct: 214 GMLEEARALFEKM--KVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVY 271
Query: 333 TYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
+YN V+ LCKNG DA L+ M PD +TY + C GK A N +M
Sbjct: 272 SYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREM 331
Query: 393 VKRGLQP 399
++ G P
Sbjct: 332 MRDGCSP 338
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 77/211 (36%), Gaps = 23/211 (10%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ C ++L EM + GC P T N +L L K G+ ++A ELL++M
Sbjct: 308 YTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMN 367
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG---------------------- 396
+ D +T I I C GK D A N M G
Sbjct: 368 EKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRK 427
Query: 397 -LQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMA 455
P L +++ I G R +A K + K + +Y + K A
Sbjct: 428 KCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSA 487
Query: 456 KNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
VL +M K G + Y ++ L + +Q
Sbjct: 488 FRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQ 518
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 53/115 (46%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
+ Y++ I C+ +L +M + GC TYN ++ L Q + L++E
Sbjct: 469 AIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDE 528
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
M R PD Y + C G+ A + ++M+++G+ P +++ + IK +
Sbjct: 529 MRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAF 583
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 51/118 (43%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V YNI++ +C+ R L+ M G P T+TY +L C G+ ++A
Sbjct: 267 EPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANN 326
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+L EM+ C P+ T I + + G+ A +M ++G T I G
Sbjct: 327 VLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDG 384
>gi|302785283|ref|XP_002974413.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
gi|300158011|gb|EFJ24635.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
Length = 447
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 93/196 (47%), Gaps = 5/196 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y IL++ C+ +F+ +LL EM+ G P + + ++ LC G+ + A L +
Sbjct: 33 YGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQAL-LHFRRI 91
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
G +C P+ TY I + C+ G+ A+ +MVK+G P + T+ A I G+ R +
Sbjct: 92 GEDCAPNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERLD 151
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ + + + + + Y+++ + KNN+ A +L+ + K NV Y +
Sbjct: 152 EVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKR----NVVTYNSLF 207
Query: 479 KHLHTSHQEHMAKCLS 494
L T+ + + LS
Sbjct: 208 TALSTAEGDRTTEALS 223
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 100/211 (47%), Gaps = 6/211 (2%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRR--CDFKGPRDLLVEMRQVG--C 327
L++ F G ++ A ++ + + N++I R C L+ R++G C
Sbjct: 36 LMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHFRRIGEDC 95
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
P TY+ ++ LCK+GQ +A L+ EM+ + C P+ +TY I ++ + D
Sbjct: 96 APNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERLDEVLM 155
Query: 388 FFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHD 447
+M +RG + + T+ + + ++AY+ + + + N L++ L++
Sbjct: 156 LLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKRNVVTYNSLFTALSTA-- 213
Query: 448 KNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ + A ++L +M++ G RPN YR VL
Sbjct: 214 EGDRTTEALSLLEKMIQEGTRPNQVNYRTVL 244
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 75/174 (43%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
LL +M Q G P + Y VL +LCKN + +A ++L M + C D ++Y+I +V
Sbjct: 224 LLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFA 283
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
G+ + +M+ G T I + +A++ + SN+
Sbjct: 284 SAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMCQRGSIPSNV 343
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
Y+ L K P A +L +M++ +PNV Y ++K +E A+
Sbjct: 344 TYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKSFCREQREEEAR 397
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 47/100 (47%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N++I + C+ D L M Q G P +TYN ++G CK Q A +LL +M+
Sbjct: 311 NVVIHKFCKAGDLHEAHQLFKSMCQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQ 370
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
+ P+ ITY I CR + + A F MV G P
Sbjct: 371 ADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDSGCFP 410
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 48/104 (46%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
+LL M G T T N V+ CK G +A +L + M R P +TY I
Sbjct: 293 ELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMCQRGSIPSNVTYNTLIGAF 352
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
C+ + D A +QM++ +P + T+ + IK + R E+A
Sbjct: 353 CKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKSFCREQREEEA 396
>gi|83744090|gb|ABC42331.1| PPR protein [Oryza sativa Indica Group]
Length = 506
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 82/183 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ +I +C+ ++ M + G P TY ++ C +GQ +A + LE
Sbjct: 233 VVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLE 292
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M P+ +TY F+ Y C+ G+ A F MVKRGL+P + T+++ + GY I
Sbjct: 293 KMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFYSMVKRGLKPDITTYSSLLHGYAIEG 352
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ + L + +++ L K A V S+M GL+PN Y
Sbjct: 353 ALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRHQGLKPNCVTYN 412
Query: 476 RVL 478
++
Sbjct: 413 TLI 415
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 80/182 (43%), Gaps = 2/182 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQ--VGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
+ I++K +C + +LL M GC P ++Y+ V L K G A E
Sbjct: 164 HTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVTDGLLKGGDPDKAYATYRE 223
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
ML R P+ +TY I C+ D A ++MVK G+ P T+ + + G+ +
Sbjct: 224 MLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQ 283
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
+A K++ + + YS KN A+ + M+K GL+P+++ Y
Sbjct: 284 LTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFYSMVKRGLKPDITTYSS 343
Query: 477 VL 478
+L
Sbjct: 344 LL 345
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 79/215 (36%), Gaps = 39/215 (18%)
Query: 281 LYEMAKYVIK----KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNY 336
L E K++ K E V Y+ + +C+ R + M + G +P TY+
Sbjct: 284 LTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFYSMVKRGLKPDITTYSS 343
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
+L G + L + M+ + PD + I S + GK D A F++M +G
Sbjct: 344 LLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRHQG 403
Query: 397 LQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAK 456
L+P T+ I GY R E+A
Sbjct: 404 LKPNCVTYNTLINGYCKITRMENALA---------------------------------- 429
Query: 457 NVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
+ EM+ NG+ PN Y +L+ L + + AK
Sbjct: 430 -LFQEMVSNGVSPNFITYNIMLQGLFRTGRTGTAK 463
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 86/189 (45%), Gaps = 7/189 (3%)
Query: 261 GGSCLVSGVR--ALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFK 313
GG C + V ALI+ F G E ++++ E+ V Y+ LI C + D +
Sbjct: 192 GGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIE 251
Query: 314 GPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFI 373
++L EM + P +TY+ ++ LCK + +A ++L+ M G PD + Y +
Sbjct: 252 RGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLA 311
Query: 374 VYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKS 433
+ G+ A + MVKRG +P T+ A I G R +DA + A K K
Sbjct: 312 DGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKK 371
Query: 434 SSNMLYSLL 442
+ YS L
Sbjct: 372 PDVVTYSTL 380
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 101/242 (41%), Gaps = 42/242 (17%)
Query: 276 FSVLGLYEMAKYVIKKT-ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
F VLGL ++K+ V +N+L+K C+ D DL M++ P ++Y
Sbjct: 114 FGVLGL------IMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSY 167
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N V+ LCK + +A EL +EM G C P+++T+ I C+ G + F +M K
Sbjct: 168 NTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEK 227
Query: 395 RGLQPRLATHAAFIKGY------------FIFYRYEDAYKYVVL---------SADKYKS 433
GL+ + ++A I G+ F ++ VV K+K
Sbjct: 228 MGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKE 287
Query: 434 SSNML--------------YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
++ ML Y++LA KN A VL M+K G PN Y ++
Sbjct: 288 AAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIIN 347
Query: 480 HL 481
L
Sbjct: 348 GL 349
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 86/228 (37%), Gaps = 37/228 (16%)
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
K V Y +L + + +L M + G EP +TYN ++ LCK G+ DA
Sbjct: 299 KVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDA 358
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN-------------------- 390
+LE M + PD +TY + C VGK D A + N
Sbjct: 359 LGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVI 418
Query: 391 -----------------QMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKS 433
MV+RG + T+ I GY + A + + D S
Sbjct: 419 QELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGIS 478
Query: 434 SSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ Y++L + K +AK + ++ +G RP VS Y ++ L
Sbjct: 479 PNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASL 526
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 67/139 (48%)
Query: 292 TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADAC 351
T VS YN L+ +CR + R+L EMR +P +++N ++ K G A
Sbjct: 512 TRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAK 571
Query: 352 ELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
ELL EML N PD IT+ I I ++G+ D A + + +MV G P + +KGY
Sbjct: 572 ELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGY 631
Query: 412 FIFYRYEDAYKYVVLSADK 430
+ + E + ADK
Sbjct: 632 SLKGKTEKVVSMLQQMADK 650
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 78/176 (44%), Gaps = 13/176 (7%)
Query: 230 EKAFGFLPVLISSKALTKKGIW-RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYV 288
+ A G L + + KKG VV V G C GV + E +L L ++
Sbjct: 356 DDALGIL------ETMAKKGKKPDVVTYSTLVKGLC---GVGKIDEAVDLLNLLMSKEFH 406
Query: 289 IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
IK V +N++I+E+C++ + + + M + G +TYN ++ G+
Sbjct: 407 IKP---DVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLT 463
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
A EL ++ + P+A TY + I C++ +A FN+ G +P ++ +
Sbjct: 464 KALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEY 519
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 13/216 (6%)
Query: 272 LIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI FS L ++A V+ K + + + LI +C+ F +L +M G
Sbjct: 139 LINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARG 198
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
C P TY ++ LCK G+ A A LL++M C P+ +TY I + + + A
Sbjct: 199 CRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEAL 258
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM----LYSLL 442
+ F+ M +G+ P + T+ + I+G F ++++A + ++ +S + M +++L
Sbjct: 259 DIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALL----NEMRSLNIMPDIVTFNVL 314
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
K A+ VL M + G+ P+V Y ++
Sbjct: 315 VDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLM 350
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 85/189 (44%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V Y+ L+ R + R L M GC+P +YN ++ CK + +A +
Sbjct: 340 EPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQ 399
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
L EM+ + P+ ++Y I C++G A N F M G P L T++ + G+
Sbjct: 400 LFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFC 459
Query: 413 IFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
+ A++ Y + ++Y++L K+ N A+ + SE+ GL+PN
Sbjct: 460 KQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQ 519
Query: 473 VYRRVLKHL 481
+Y ++ L
Sbjct: 520 IYTTIINGL 528
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 74/165 (44%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
D+ M+ G P TYN ++ LC Q +A LL EM N PD +T+ + +
Sbjct: 259 DIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTI 318
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
C+ GK A M + G++P + T+++ + GY + +A K K
Sbjct: 319 CKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDV 378
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y++L + + K AK + +EM+ GL PN Y ++ L
Sbjct: 379 FSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGL 423
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 77/185 (41%), Gaps = 35/185 (18%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
+L ++ ++G +P +T+ ++ LCK G+ A A EL ++M+ R C PD TY I C
Sbjct: 155 VLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLC 214
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
++G+ A +M + G QP + T
Sbjct: 215 KIGETAAAAGLLKKMEEAGCQPNVVT---------------------------------- 240
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRY 497
YS + H K+ A ++ S M G+ P++ Y +++ L Q A L +
Sbjct: 241 -YSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEM 299
Query: 498 SSLSL 502
SL++
Sbjct: 300 RSLNI 304
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 3/131 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+IL+ C++ F L M+ +P + YN ++ +CK+G DA +L E+
Sbjct: 451 YSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELF 510
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+A Y I C+ G D A F M + G P ++ I+G F ++
Sbjct: 511 VKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRG---FLHHK 567
Query: 419 DAYKYVVLSAD 429
D + V L +
Sbjct: 568 DESRAVQLIGE 578
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 61/151 (40%), Gaps = 1/151 (0%)
Query: 329 PITLTYNYVLGVLCKNGQDADAC-ELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
P + + +L + K GQ D L ++M P+ T I I + + D+AF+
Sbjct: 95 PCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFS 154
Query: 388 FFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHD 447
+++K GLQP + T I ++ A + + Y+ + +
Sbjct: 155 VLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLC 214
Query: 448 KNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
K A +L +M + G +PNV Y ++
Sbjct: 215 KIGETAAAAGLLKKMEEAGCQPNVVTYSTII 245
>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
Length = 822
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 108/248 (43%), Gaps = 22/248 (8%)
Query: 231 KAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIK 290
+A GFLP L++ +L +CL G + +E L L EM K +
Sbjct: 266 EAKGFLPTLVTYGSLI----------------NCL--GKKGDLEKIGSLFL-EMRK---R 303
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
V YN +I +C+ +L +M GC+P +T+N ++ LC G A
Sbjct: 304 GLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKA 363
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
L E + R +P+ ++Y I C G+ A + +M+ RG P + T A I G
Sbjct: 364 EHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHG 423
Query: 411 YFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
+ + +A ++ +Y++L S K + AKN+L EM++ ++P+
Sbjct: 424 LVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPD 483
Query: 471 VSVYRRVL 478
VY ++
Sbjct: 484 EFVYATLI 491
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 58/151 (38%), Gaps = 35/151 (23%)
Query: 296 VSYYNILIKEMCRRCDF-------------------------------KGPRD----LLV 320
V +YN+LI CRR D KG + L +
Sbjct: 239 VVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFL 298
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
EMR+ G P YN V+ LCK A +L++M C PD IT+ I C G
Sbjct: 299 EMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEG 358
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
A +F + ++R L P ++ I G+
Sbjct: 359 HVRKAEHFLREAIRRELNPNQLSYTPLIHGF 389
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 84/200 (42%), Gaps = 5/200 (2%)
Query: 213 TMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRAL 272
T RQ+ D N+Y V ++ + L ++K + ++ + + V+ ++ + L+ G
Sbjct: 441 TERQVFPDVNIYNVLISGLCKKHM--LPAAKNILEEMLEKNVQP-DEFVYATLIDGFIRS 497
Query: 273 IEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITL 332
+ ++E ++ K + N +IK C+ + MR+VGC P
Sbjct: 498 ENLGDARKIFEFMEH--KGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEF 555
Query: 333 TYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
TY V+ K G A L +M+ R C P+ +TY I C+ G D A F M
Sbjct: 556 TYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANM 615
Query: 393 VKRGLQPRLATHAAFIKGYF 412
L P + T+ I F
Sbjct: 616 QAEALSPNVVTYTILIGSLF 635
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 4/182 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI C R + DLL+EM G P +T+ ++ L G+ ++A + E+M
Sbjct: 382 YTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMT 441
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R PD Y + I C+ A N +M+++ +QP +A I G+
Sbjct: 442 ERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLG 501
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL--SEMMKNGLRPNVSVYRR 476
DA K + ++K + S A + +M++ +L S M K G P+ Y
Sbjct: 502 DARK--IFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTT 559
Query: 477 VL 478
V+
Sbjct: 560 VI 561
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 46/108 (42%)
Query: 301 ILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGR 360
+L++ +C + L+ GC P + YN ++ C+ G LL EM +
Sbjct: 209 VLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAK 268
Query: 361 NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
P +TY I + G + + F +M KRGL P + + + I
Sbjct: 269 GFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVI 316
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 91/215 (42%), Gaps = 5/215 (2%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI +S G ++ A V K+ R+ V N L+ +C+ K RD+ M G
Sbjct: 297 LIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKG 356
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
P +Y +L G D +L + MLG PD T+ + I G D A
Sbjct: 357 QNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAM 416
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
FN+M G++P + T+ I + +DA + D+ Y L
Sbjct: 417 IIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGF 476
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + + AK ++SE+M NG+R ++ + ++ +L
Sbjct: 477 CTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNL 511
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 84/188 (44%), Gaps = 4/188 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVG--CEPITLTYNYVLGVLCKNGQDADACELLEE 356
YNIL+K +C + DLL M + G C P + YN V+ K G AC+L +E
Sbjct: 187 YNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKE 246
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
M+ R PD +TY + C+ D A F QMV +G+ P T+ I GY +
Sbjct: 247 MVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQ 306
Query: 417 YEDAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+++A + + + L +L+ SL K A++V M G P+V Y
Sbjct: 307 WKEAVRVFKEMRRQSILPDVVALNTLMGSLC-KYGKIKEARDVFDTMAMKGQNPDVFSYT 365
Query: 476 RVLKHLHT 483
+L T
Sbjct: 366 IMLNGYAT 373
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 81/183 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ LI+ C ++L+ E+ G + + ++ LCK G+ DA + + +
Sbjct: 469 YHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTV 528
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
HPDA+ Y + + C VGK + A F+ MV G++P + + + GY R +
Sbjct: 529 NVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRID 588
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ K S +LY+++ + V AK EM ++G+ N Y VL
Sbjct: 589 EGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVL 648
Query: 479 KHL 481
+ L
Sbjct: 649 RGL 651
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 71/166 (42%), Gaps = 2/166 (1%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML--GRNCHPDAITYEIFIVY 375
LL ++GC P +YN +L LC G+ A +LL M G C PD + Y I
Sbjct: 171 LLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDG 230
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
+ G + A + F +MV+RG+ P L T+++ + + A ++ +K
Sbjct: 231 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPD 290
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
N Y+ L + A V EM + + P+V ++ L
Sbjct: 291 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSL 336
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 70/176 (39%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N+LIK + EMR G +P +TY V+ LC+ G+ DA E +M+
Sbjct: 399 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMI 458
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD Y I C G A ++++ G++ + + I R
Sbjct: 459 DQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVM 518
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
DA L+ + ++Y++L + A V M+ G+ PNV Y
Sbjct: 519 DAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGY 574
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 87/229 (37%), Gaps = 51/229 (22%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK------------ 343
V YN +I + D DL EM Q G P +TY+ V+ LCK
Sbjct: 221 VVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLR 280
Query: 344 -----------------------NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
GQ +A + +EM ++ PD + + C+ G
Sbjct: 281 QMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYG 340
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI---FYRYEDAYKYVV---LSADKYKSS 434
K A + F+ M +G P + ++ + GY D + ++ ++ D Y +
Sbjct: 341 KIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIY--T 398
Query: 435 SNMLYSLLA--SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
N+L A + DK A + +EM +G++P+V Y V+ L
Sbjct: 399 FNVLIKAYANCGMLDK------AMIIFNEMRDHGVKPHVVTYMTVIAAL 441
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 80/184 (43%), Gaps = 2/184 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+L+ C + + M G EP + Y ++ CK G+ + L EML
Sbjct: 539 YNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREML 598
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P I Y I I G+ A F++M + G+ T++ ++G F ++
Sbjct: 599 QKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFD 658
Query: 419 DA-YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+A + + L A K L +++A + + AK++ + + ++GL P Y +
Sbjct: 659 EAIFLFKELRAMNVKIDIITLNTMIAGMF-QTRRVEEAKDLFASISRSGLVPCAVTYSIM 717
Query: 478 LKHL 481
+ +L
Sbjct: 718 ITNL 721
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 82/220 (37%), Gaps = 8/220 (3%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
G CLV + + +F + V E V Y L+ C+ L E
Sbjct: 545 GYCLVGKMEKALRVFDAM--------VSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFRE 596
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M Q G +P T+ YN ++ L + G+ A EM + TY I + +
Sbjct: 597 MLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRC 656
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
FD A F ++ ++ + T I G F R E+A + + YS+
Sbjct: 657 FDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSI 716
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + K A+++ S M G P+ + V++ L
Sbjct: 717 MITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVREL 756
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 95/224 (42%), Gaps = 3/224 (1%)
Query: 265 LVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQ 324
L+ G+ + + LGLY+ +++ YN LI RR + L+ +M
Sbjct: 125 LIFGLCKVNKFEEALGLYQ--DMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLF 182
Query: 325 VGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
GC +TYN ++ LC+ G L E+M+ + +P+ I+ I I CR G
Sbjct: 183 RGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQH 242
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLAS 444
A F M+ RGL P + T+ + I G R ++A + + Y+ L S
Sbjct: 243 ALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLIS 302
Query: 445 LHDKNNNPVMAKNVLSEMMKNGLRPN-VSVYRRVLKHLHTSHQE 487
H K A +LS + +G PN V+ Y V + QE
Sbjct: 303 WHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 346
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 79/187 (42%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
M + IK E V Y ILI C+ + R++L EM G + YN ++ LCK
Sbjct: 37 MNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCK 96
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
+ + DA + +M + C PD T+ I C+V KF+ A + M+ G+ T
Sbjct: 97 DEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTIT 156
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
+ I + ++A K V + ++ Y+ L + N + +MM
Sbjct: 157 YNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMM 216
Query: 464 KNGLRPN 470
GL PN
Sbjct: 217 SKGLNPN 223
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 63/122 (51%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C++ R+L+ EM+ GCEP +TY ++ CK G+ +A +L+EM
Sbjct: 17 YNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMS 76
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
G+ +A+ Y I C+ K A N F M +G +P + T + I G ++E
Sbjct: 77 GKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFE 136
Query: 419 DA 420
+A
Sbjct: 137 EA 138
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 48/99 (48%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M VGC P TYN ++ LCK G A EL+ EM + C P+ ITY I I C+ G+
Sbjct: 5 MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 64
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
+ A N ++M +GL + I + +DA
Sbjct: 65 LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDA 103
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 55/124 (44%)
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
E ML C PD TY I+ C+ G A N+M +G +P + T+ I +
Sbjct: 3 ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKE 62
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
R E+A + + K + + + Y+ L S K+ A N+ +M G +P++ +
Sbjct: 63 GRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTF 122
Query: 475 RRVL 478
++
Sbjct: 123 NSLI 126
>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
aristata]
Length = 431
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ +L EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 212 VYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 271
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G A + ++M +GL+P T+ I G
Sbjct: 272 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEG 331
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ A+++ + + Y+ L S + V A+ +L EM+ GL+P+ Y
Sbjct: 332 DLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYT 391
Query: 476 RVL 478
++
Sbjct: 392 MII 394
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 54/112 (48%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ R D L M G +P TY+ ++ LCK + DA EL +EML
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 239
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ P+ +T+ I C+ G+ D+A + QM+ + L P L T+ I G
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 291
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 78/181 (43%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ C+ D + + + + + G P ++YN ++ + G + L M
Sbjct: 144 FFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAM 203
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
L PD TY + I C+ K D A F++M+ +GL P T I G+ R
Sbjct: 204 LASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRV 263
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ A + + S + Y+ L K + A +++ EM GL+P+ Y +
Sbjct: 264 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTL 323
Query: 478 L 478
+
Sbjct: 324 I 324
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 83/185 (44%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
+ + +++ + + K R++ +M + G P + YN ++ L K G +A ++L+
Sbjct: 226 ALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDN 285
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
ML + C P +TY I + C+ G + A F M G +P + + I G+ R
Sbjct: 286 MLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGR 345
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
++A + + ++++ K+ N A EMM+ G +PNV Y
Sbjct: 346 MKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTT 405
Query: 477 VLKHL 481
+++ L
Sbjct: 406 IIQGL 410
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y IL+ +C+ + +L M G P ++ Y ++ K+G+ +AC L +EM+
Sbjct: 298 YGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMV 357
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD IT+ + I C+ G F+ A F +M++ G +P + T+ I+G R
Sbjct: 358 EAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVA 417
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A++ + ++ Y L K A +L E+ K PN+ +Y ++
Sbjct: 418 NAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLV 477
Query: 479 KHL 481
K L
Sbjct: 478 KGL 480
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 63/130 (48%), Gaps = 2/130 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRD--LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACEL 353
+ YNILI +CR + + R LL ++ VG P +TY + LCK G+ A ++
Sbjct: 541 ATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKM 600
Query: 354 LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
LEE R + D + Y C G+ D A + F +MV++G P A + I G
Sbjct: 601 LEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIK 660
Query: 414 FYRYEDAYKY 423
+ EDA K+
Sbjct: 661 GKKLEDACKF 670
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 82/196 (41%), Gaps = 9/196 (4%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y L +C + L EM + G P Y ++ L K + DAC+ +
Sbjct: 613 VVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFD 672
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG-LQPRLATHAAFIKGYFIF 414
EM+G+ P TY + C G D AF+ F M+ RG L + + A I G+
Sbjct: 673 EMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKA 732
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLL-ASLHD---KNNNPVMAKNVLSEMMKNGLRPN 470
+ + A K + S N+ ++ ASL D ++ A+ +L EM G P+
Sbjct: 733 LKVDAALKLF----EDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPH 788
Query: 471 VSVYRRVLKHLHTSHQ 486
+ + +L L S +
Sbjct: 789 AATFTAILDGLRKSDE 804
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 92/212 (43%), Gaps = 10/212 (4%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
L++ F LG + A ++ + ++ + Y+ L+K +C + D L E +
Sbjct: 441 LLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAA 500
Query: 327 CEPIT--LTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV--GKF 382
E + L + ++G LCK G+ +AC + + M+ C PDA TY I I CR +
Sbjct: 501 AENLDPGLCCSIIVG-LCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRV 559
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
+ AF + + G P T+ G + A K + ++ + ++ + Y+ L
Sbjct: 560 ERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTAL 619
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ A ++ EM++ G P+ + Y
Sbjct: 620 CTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAY 651
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 7/177 (3%)
Query: 251 WRVVEVLNQVG---GSCLVSGVRALIEMFSVLGL-YEMAKYVIKKT--ERKVSYYNILIK 304
W V + N +G G L S V A++ V G ++ ++ + V YN L+
Sbjct: 68 WSVHNIRNVLGPVHGQVLGSHVAAVLRSLKVTGTAISFFRWAGEQAGFQHDVFTYNCLMN 127
Query: 305 EMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHP 364
+ ++ + EM + G P T ++N ++ + + DA E M + C P
Sbjct: 128 LLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKP 187
Query: 365 DAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG-LQPRLATHAAFIKGYFIFYRYEDA 420
D T+ I + C+ G + AF F++M+ G + P A H A ++ R ++A
Sbjct: 188 DLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEA 244
>gi|297746144|emb|CBI16200.3| unnamed protein product [Vitis vinifera]
Length = 1093
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 2/178 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+NI+IK + ++ + EM +P +T+N ++G LC G A LLE+M+
Sbjct: 592 FNIIIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIGFLCGKGDLDGAMGLLEDMI 651
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+A+TY + + C +GK+ A M +G +PRL + R +
Sbjct: 652 QKRHRPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNFGVLMSDLGRRGRID 711
Query: 419 DAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
D+ K ++L + + +++ Y++L + K + A VL EM G PN + YR
Sbjct: 712 DS-KTLLLEMKRRRFKPDVVTYNILINHLCKEGRALEAYKVLVEMQVGGCEPNAATYR 768
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 16/213 (7%)
Query: 274 EMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLT 333
++ +GL E + K+ Y +L++ +C +K + ++ +M GC+P L
Sbjct: 639 DLDGAMGLLE--DMIQKRHRPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLN 696
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
+ ++ L + G+ D+ LL EM R PD +TY I I + C+ G+ A+ +M
Sbjct: 697 FGVLMSDLGRRGRIDDSKTLLLEMKRRRFKPDVVTYNILINHLCKEGRALEAYKVLVEMQ 756
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSA-------DKYKSSSNMLYSLLASLH 446
G +P AT+ + G+ +E K VLSA + +S +++ LL
Sbjct: 757 VGGCEPNAATYRMMVDGFCQVEDFEGGLK--VLSAMLMCGHCPRLESFCDLVVGLL---- 810
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
KN A VL EM K +R ++ + ++K
Sbjct: 811 -KNGKIDGACFVLEEMEKRKMRFHLEAWEALVK 842
>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
Length = 796
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 8/161 (4%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
+L +M GC P +TYN ++ K+G +A EL +EM R PD +TY I
Sbjct: 313 VLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLD 372
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN- 436
R+GK D A +++MV+ G P L T+ A IK + + ++ + +++ D +S+
Sbjct: 373 RIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTE----MMIVFDDLRSAGYV 428
Query: 437 ---MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ ++ L ++ +N V EM K G P Y
Sbjct: 429 PDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTY 469
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 88/200 (44%), Gaps = 5/200 (2%)
Query: 263 SCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
+ L+SG+ + ++ + L Y ++ V + YN LIK R F + ++
Sbjct: 365 TTLISGLDRIGKIDAALATY--SEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDL 422
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
R G P +T+N +L V +NG D++ + +EM P+ TY I R G F
Sbjct: 423 RSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLF 482
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
D A + +M++ G+ P ++T+ A + R+ A K D+ + YS L
Sbjct: 483 DQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSL 542
Query: 443 ASLHDKNNNPVMAK-NVLSE 461
LH N + K LSE
Sbjct: 543 --LHAYANAKKLDKMKALSE 560
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI RR ++ + EM+ G EP +T+N +L V K + +A +L++M
Sbjct: 259 YNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYGKARRHEEAIGVLKKME 318
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
C P +TY I + G + A +M RG++P + T+ I G
Sbjct: 319 NAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISG 370
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ R D + +L E++ G P +YN V+ + GQ +A L EM
Sbjct: 644 YNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMK 703
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
PD +TY IFI F+ A + +V +G +P T+ + ++GY
Sbjct: 704 CSGVKPDIVTYNIFIKSYVANLMFEEAIDLVRYLVAQGCKPNERTYNSILEGY 756
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 90/220 (40%), Gaps = 6/220 (2%)
Query: 266 VSGVRALIEMFSVLGLYEMAKYVIKK-----TERKVSYYNILIKEMCR-RCDFKGPRDLL 319
S AL+ FS G + A V ++ + + YN+++ + +K L+
Sbjct: 185 ASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVVLV 244
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
M++ G E TYN ++ + G +A ++ +EM PD +T+ + +
Sbjct: 245 DSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYGKA 304
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
+ + A +M G P + T+ + I Y E+A + + + Y
Sbjct: 305 RRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTY 364
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
+ L S D+ A SEM++NG PN+ Y ++K
Sbjct: 365 TTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIK 404
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 5/129 (3%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTE----RKVSY-YNILIKEMCRRCDFKGPRDLLVEMRQV 325
+L+ M+S LG E + ++ + + R Y YN +I R+ K L EM+
Sbjct: 646 SLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCS 705
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G +P +TYN + N +A +L+ ++ + C P+ TY + CR G+ A
Sbjct: 706 GVKPDIVTYNIFIKSYVANLMFEEAIDLVRYLVAQGCKPNERTYNSILEGYCRHGRMVEA 765
Query: 386 FNFFNQMVK 394
+F + + K
Sbjct: 766 KSFLSNLPK 774
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 6/158 (3%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE-LLEEMLGRNCHPDAITYEIFIVY 375
++L M++ TYN ++ + + G D + CE +L E+ PD +Y I
Sbjct: 627 EVLTLMKENSINHSAATYNSLMHMYSRLG-DCEKCEAILTEIKSSGMRPDRYSYNTVIYA 685
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV-VLSADKYKSS 434
R G+ A F++M G++P + T+ FIK Y +E+A V L A K +
Sbjct: 686 YGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANLMFEEAIDLVRYLVAQGCKPN 745
Query: 435 SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
S+L + ++ V AK+ LS + K + P +S
Sbjct: 746 ERTYNSILEG-YCRHGRMVEAKSFLSNLPK--IYPGIS 780
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 62/153 (40%), Gaps = 22/153 (14%)
Query: 231 KAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIK 290
++ G++P +++ L + V Q G VSGV EM + A Y+ +
Sbjct: 423 RSAGYVPDVVTWNTL--------LAVFGQNGLDSEVSGV--FKEM-------KKAGYIPE 465
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
+ Y LI R F ++ M + G P TYN VL L + G+ A
Sbjct: 466 R-----DTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQA 520
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
+L EM R+C PD ++Y + K D
Sbjct: 521 EKLFAEMEDRDCKPDELSYSSLLHAYANAKKLD 553
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 14/128 (10%)
Query: 364 PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY 423
PDA Y + R G+F A F +MV G+QP L T+ + ++ + +K
Sbjct: 183 PDASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVL---HVYSKMSVPWKE 239
Query: 424 VVLSADKYKSSSNML----YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN-------VS 472
VV+ D K L Y+ L S + A + EM G P+ +
Sbjct: 240 VVVLVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLD 299
Query: 473 VYRRVLKH 480
VY + +H
Sbjct: 300 VYGKARRH 307
>gi|410109937|gb|AFV61048.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
pusilla]
Length = 431
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 84/180 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y++LI +C+ +L EM G P +T+ ++ CK G+ A E+ + ML
Sbjct: 215 YSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKKGRVDLAMEIYKRML 274
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
++ PD ITY I C+ G A + ++MV +GL+P T+ I G +
Sbjct: 275 SQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVMKGLKPDKITYTTLIDGCCKEGDLD 334
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A+++ + ++ Y+ L S + V A+ +L EM+ GL+P+ Y ++
Sbjct: 335 TAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMII 394
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 81/182 (44%), Gaps = 12/182 (6%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVE----MRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
+ LI C+ KG DL +E M P +TYN ++ LCK G A +L+
Sbjct: 250 FTTLIDGHCK----KGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLI 305
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
+EM+ + PD ITY I C+ G D AF +M++ ++ + A I G
Sbjct: 306 DEMVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQE 365
Query: 415 YRYEDAYKYV--VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVS 472
R DA K + +LS + Y+++ + K + +L EM +NG P+V
Sbjct: 366 GRSVDAEKMLREMLSVGLKPDTGT--YTMIINEFCKKGDVWKGSRLLKEMQRNGHVPSVV 423
Query: 473 VY 474
Y
Sbjct: 424 TY 425
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 14/188 (7%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ C+ D + + + + + G P ++YN ++ + G + L M
Sbjct: 144 FFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAM 203
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
L PD TY + I C+ K D A F++M+ +GL P T I G+ R
Sbjct: 204 LASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKKGR- 262
Query: 418 EDAYKYVVLSADKYKS--SSNML-----YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
V L+ + YK S ++L Y+ L K + A +++ EM+ GL+P+
Sbjct: 263 ------VDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVMKGLKPD 316
Query: 471 VSVYRRVL 478
Y ++
Sbjct: 317 KITYTTLI 324
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 55/115 (47%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN L+ R D L M G +P TY+ ++ LCK + DA EL +
Sbjct: 177 VVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFD 236
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
EML + P+ +T+ I C+ G+ D+A + +M+ + L P L T+ I G
Sbjct: 237 EMLVKGLVPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYG 291
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 55/147 (37%), Gaps = 35/147 (23%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL-------------------- 338
YN LI +C++ D K DL+ EM G +P +TY ++
Sbjct: 285 YNTLIYGLCKKGDLKQANDLIDEMVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMI 344
Query: 339 ---------------GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
LC+ G+ DA ++L EML PD TY + I C+ G
Sbjct: 345 QENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVW 404
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKG 410
+M + G P + T+ + G
Sbjct: 405 KGSRLLKEMQRNGHVPSVVTYNVLMNG 431
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/148 (20%), Positives = 60/148 (40%)
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
+N ++ CK+G A + + + P ++Y + R+G D F + M+
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPV 453
G+QP T++ I G + +DA + K + + ++ L H K
Sbjct: 205 ASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKKGRVD 264
Query: 454 MAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+A + M+ L P++ Y ++ L
Sbjct: 265 LAMEIYKRMLSQSLLPDLITYNTLIYGL 292
>gi|224117008|ref|XP_002317451.1| predicted protein [Populus trichocarpa]
gi|222860516|gb|EEE98063.1| predicted protein [Populus trichocarpa]
Length = 461
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 2/146 (1%)
Query: 263 SCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
S L+SG+ LG++E K K + YN++I C+ DF+ LL EM
Sbjct: 260 STLISGLFKAGRKEEALGVWEDMKERGYKPD--TVTYNVIINLFCKDKDFEAAYRLLDEM 317
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
+ GC+P ++YN +L L + G+ +A +L E+M R C PD ++Y I C +F
Sbjct: 318 VEKGCKPDVISYNVILRELFEEGKRGEANDLFEDMPRRGCAPDVVSYRILFDGFCNGMQF 377
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFI 408
A ++M+ +G P A+ F+
Sbjct: 378 KEAAFILDEMIFKGFVPCSASICKFV 403
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 127/302 (42%), Gaps = 50/302 (16%)
Query: 239 LISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALI-EMFSVLGLYEMAKYVIK------- 290
LI +K K + E+L Q+ L + AL ++ + G + + +K
Sbjct: 50 LIITKLGRAKMFNEMQEILAQLKEETLFTPKEALFCDIINFYGRARLPENALKLLVELPS 109
Query: 291 -KTERKVSYYNILIKE--MCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQD 347
+ +R V YN L+ MC+ DF R+L V + ++G + TYN ++ C +G+
Sbjct: 110 FRVQRTVKSYNSLLSVFLMCK--DFDKMRELFVGIEKLG-KADACTYNLLIRGFCASGRL 166
Query: 348 ADACELLEEMLGRNCHPDAITY------------------------EIFIVYS------- 376
DA ++ +EM R P+ IT+ +++ VY
Sbjct: 167 DDASKVFDEMTNRGVSPNVITFGNLIYGFCLHLRLKEAFKLKTDMVKVYRVYPNAYIYAS 226
Query: 377 -----CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKY 431
C+ G+ +AF +M++ ++ A ++ I G F R E+A ++
Sbjct: 227 LIKGVCKNGELSLAFRLKKEMIRNKIELDPAIYSTLISGLFKAGRKEEALGVWEDMKERG 286
Query: 432 KSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
+ Y+++ +L K+ + A +L EM++ G +P+V Y +L+ L + A
Sbjct: 287 YKPDTVTYNVIINLFCKDKDFEAAYRLLDEMVEKGCKPDVISYNVILRELFEEGKRGEAN 346
Query: 492 CL 493
L
Sbjct: 347 DL 348
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 66/131 (50%), Gaps = 1/131 (0%)
Query: 282 YEMAKYVIK-KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
+ + K +I+ K E + Y+ LI + + + + +M++ G +P T+TYN ++ +
Sbjct: 241 FRLKKEMIRNKIELDPAIYSTLISGLFKAGRKEEALGVWEDMKERGYKPDTVTYNVIINL 300
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
CK+ A LL+EM+ + C PD I+Y + + GK A + F M +RG P
Sbjct: 301 FCKDKDFEAAYRLLDEMVEKGCKPDVISYNVILRELFEEGKRGEANDLFEDMPRRGCAPD 360
Query: 401 LATHAAFIKGY 411
+ ++ G+
Sbjct: 361 VVSYRILFDGF 371
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 62/147 (42%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P Y ++ +CKNG+ + A L +EM+ D Y I + G+ + A
Sbjct: 219 PNAYIYASLIKGVCKNGELSLAFRLKKEMIRNKIELDPAIYSTLISGLFKAGRKEEALGV 278
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
+ M +RG +P T+ I + +E AY+ + +K + Y+++ +
Sbjct: 279 WEDMKERGYKPDTVTYNVIINLFCKDKDFEAAYRLLDEMVEKGCKPDVISYNVILRELFE 338
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYR 475
A ++ +M + G P+V YR
Sbjct: 339 EGKRGEANDLFEDMPRRGCAPDVVSYR 365
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 83/181 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+NILI C F +L +MR GC P +TYN +L LCK G+ +A +LL +M
Sbjct: 200 FNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMK 259
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+ T+ I +V CR+G A N M + + P T+ I G+ R
Sbjct: 260 NKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIA 319
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + + S + Y+ L + ++ + ++ EM G++PN Y ++
Sbjct: 320 EAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMV 379
Query: 479 K 479
K
Sbjct: 380 K 380
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 81/180 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN ++ +C++ RDLL++M+ G P T+N ++ C+ G +A ++E M
Sbjct: 235 YNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMS 294
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PDA TY + I C+ G+ A +M L P + T+ I G F E
Sbjct: 295 QNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSE 354
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ +K + + +++ Y+++ K + +M ++G P++ Y ++
Sbjct: 355 EGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLI 414
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 87/200 (43%), Gaps = 8/200 (4%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L EM++ P +TYN ++ LC+ G+ A + L+E+L PD ITY I C
Sbjct: 499 LWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYC 558
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ G+ + AF F N+MV++ +P + T + G E A K K K +
Sbjct: 559 QEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAV 618
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRY 497
Y+ + K A ++L EM + L P+ Y +L L + + A+ S+
Sbjct: 619 SYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKI 678
Query: 498 SS--------LSLGSSVEAR 509
+ L LG +AR
Sbjct: 679 AEKGKSENQFLELGKRQDAR 698
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 82/186 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI + L+ EM G +P ++TYN ++ K G+ + + +
Sbjct: 337 VVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVR 396
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M C PD +TY I + C+VGK D AF ++M ++GL+ T ++
Sbjct: 397 KMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRER 456
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ ++A+ + + + + Y L + K+ A + EM + + P++ Y
Sbjct: 457 KLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYN 516
Query: 476 RVLKHL 481
++ L
Sbjct: 517 SMIAGL 522
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 60/124 (48%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN++I C++ L EM + P +TYN ++ ++G + +L+EEM
Sbjct: 305 YNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEME 364
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
GR P+++TY + + + + GK D +M + G P + T+ I + + +
Sbjct: 365 GRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMD 424
Query: 419 DAYK 422
+A++
Sbjct: 425 EAFR 428
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 65/140 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I C+ + +M + +P +T N +L LCK G A +L +
Sbjct: 550 YNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWI 609
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ DA++Y I+ C+ +F AF+ +M ++ L P T+ A + G R +
Sbjct: 610 SKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMK 669
Query: 419 DAYKYVVLSADKYKSSSNML 438
DA +++ A+K KS + L
Sbjct: 670 DAEEFISKIAEKGKSENQFL 689
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N +++ +CR DLL R+ G ++Y ++ K+ + + A L +EM
Sbjct: 446 NTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKE 505
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
+ P ITY I C++GK + A + +++++ GL P T+ I GY + E
Sbjct: 506 KEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEK 565
Query: 420 AYKY 423
A+++
Sbjct: 566 AFQF 569
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 63/155 (40%)
Query: 324 QVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
++G + T ++N ++ C + +A +L +M C PD ITY + C+ G+ +
Sbjct: 190 KIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLN 249
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
A + M +GL P T + G ++A + L + Y+++
Sbjct: 250 EARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMI 309
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
S K A + EM L P+V Y ++
Sbjct: 310 SGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLI 344
>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
Length = 991
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 83/184 (45%), Gaps = 3/184 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V + LI +C+ R L M Q G P +TYN ++ K G+ DA ++ E
Sbjct: 288 VRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKE 347
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M CHPD TY I C K + A N VK G P + T I GY +
Sbjct: 348 LMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAE 406
Query: 416 RYEDAYKYV-VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+++DA + + + K K + L+ SL K + AK +L+E+ NGL PNV Y
Sbjct: 407 KFDDALRMKNKMMSSKCKLDLQVFGKLINSLI-KKDRLKEAKELLNEISANGLVPNVITY 465
Query: 475 RRVL 478
++
Sbjct: 466 TSII 469
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 78/186 (41%), Gaps = 3/186 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y +I C+ ++L M + GC+P TYN ++ L K+ + A LL
Sbjct: 462 VITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLT 521
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M P+ ITY + C FD AF F M + GL+P +A
Sbjct: 522 KMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG 581
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R E+AY ++V K + + + Y+ L K N A ++ M+ G P+ Y
Sbjct: 582 RAEEAYSFIV---RKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYS 638
Query: 476 RVLKHL 481
+L L
Sbjct: 639 VLLHAL 644
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 76/184 (41%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
YY LI + + L+ M GC P + TY+ +L LCK + +A +L++M
Sbjct: 601 YYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQM 660
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
R Y I I R GK D A +N+M G +P T+ FI Y R
Sbjct: 661 SLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRL 720
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
EDA ++ + + + Y++L A + L M+ PN Y +
Sbjct: 721 EDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLL 780
Query: 478 LKHL 481
LKHL
Sbjct: 781 LKHL 784
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 107/253 (42%), Gaps = 24/253 (9%)
Query: 247 KKGIWRVVEVLNQV---GGSCLVSGVRALIEMFSVLGLYEMAKYVIKKT-----ERKVSY 298
+K + + +L+Q+ G C + LI+ G ++ AK + + + +
Sbjct: 647 QKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATT 706
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y + I C+ + DL+++M + G P +TYN ++ G A L+ M+
Sbjct: 707 YTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMV 766
Query: 359 GRNCHPDAITYEIFIVYSCR----------------VGKFDVAFNFFNQMVKRGLQPRLA 402
G +C P+ TY + + + + + + D+ + +MVK GL P +
Sbjct: 767 GASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVT 826
Query: 403 THAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM 462
T+++ I G+ R E+A + K S + +Y+LL A + +S M
Sbjct: 827 TYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIM 886
Query: 463 MKNGLRPNVSVYR 475
+ G +P + YR
Sbjct: 887 SECGFQPQLESYR 899
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
LL M + G P TY+ ++ CK G+ +AC LL+ M G+ P+ Y + I C
Sbjct: 812 LLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCC 871
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
F+ A +F + M + G QP+L ++ + G
Sbjct: 872 DTKFFEKALSFVSIMSECGFQPQLESYRLLVVG 904
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 3/180 (1%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N L+ CR + + L + M +GC+ +Y ++ LC A L M
Sbjct: 222 NALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKR 281
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
C P+ + I C+ G+ A F+ M + G+ P + T+ A I GY R D
Sbjct: 282 DGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMND 341
Query: 420 AYKYVVLSADKYKSSSNMLY-SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A K L + Y +L+ L D+ A+ +L+ +K G P V + ++
Sbjct: 342 ALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEE--AEELLNNAVKEGFTPTVVTFTNLI 399
>gi|356495741|ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 145/360 (40%), Gaps = 10/360 (2%)
Query: 130 PKQVSEIIELL---RSGDSETESKLLSMSVSLSNASVIEILRVLNSEKVSALCFLKYMRE 186
P V+EI LL R + E L S LS V ++L+ + SA F + +
Sbjct: 44 PDLVNEISRLLSDHRYPHHDLELSLNPFSAQLSTNLVEQVLKRCKNLGFSAHRFFLWAKS 103
Query: 187 IMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDF-NVYQVCLNEKAFGFLPVLISSKAL 245
I P F + ++++ G + + L + + +N + F +L S+A
Sbjct: 104 I-PGFQHSVMSFHILVEILGSCKQFAILWDFLTEMRESHHYEINSEIF-WLIFRAYSQAN 161
Query: 246 TKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSY----YNI 301
G R +++ G + + L+ + + A+ + + + + S Y+I
Sbjct: 162 LPDGAIRSFNRMDEFGVKPTIHDLDKLLFILCKRKHVKQAQQLFHQAKNRFSLTAKTYSI 221
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
LI D + DL M + GC L YN +L LCK G+ +A + +ML +
Sbjct: 222 LISGWGEIGDSEKACDLFQAMLEQGCPVDLLAYNNLLQALCKGGRVDEAKNIFHDMLSKR 281
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
PDA TY IFI C AF ++M + L P + T+ IK E+AY
Sbjct: 282 VEPDAFTYSIFIHSYCDADDVQSAFRVLDKMRRYNLLPNVFTYNCIIKQLCKNEHVEEAY 341
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + + Y+ + + H + A ++ M K+ P+ Y VLK L
Sbjct: 342 QLLDEMISRGVKPDTWSYNAIQAYHCDHCEVNRALRLMFRMEKDICLPDRHTYNMVLKLL 401
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 78/196 (39%), Gaps = 40/196 (20%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K+ E Y+I I C D + +L +MR+ P TYN ++ LCKN +
Sbjct: 280 KRVEPDAFTYSIFIHSYCDADDVQSAFRVLDKMRRYNLLPNVFTYNCIIKQLCKNEHVEE 339
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSC-------------------------------- 377
A +LL+EM+ R PD +Y Y C
Sbjct: 340 AYQLLDEMISRGVKPDTWSYNAIQAYHCDHCEVNRALRLMFRMEKDICLPDRHTYNMVLK 399
Query: 378 ---RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY-RYEDAYKYVVLSADK--- 430
R+G+FD + MV + P ++T++ I G+ + E+A KY + D+
Sbjct: 400 LLIRIGRFDKVTEVWENMVDKKFYPSVSTYSVMIHGFCKKKGKLEEACKYFEMMIDEGIP 459
Query: 431 -YKSSSNMLYSLLASL 445
Y ++ ML + L L
Sbjct: 460 PYVTTVEMLRNRLLGL 475
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 59/126 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +K MC D G +++ EM GC P + Y ++ + + DA +L+EM
Sbjct: 423 YGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMR 482
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD Y I+ + K D A +F +MV+ G +P T+ AFI GY +
Sbjct: 483 EQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFA 542
Query: 419 DAYKYV 424
A KYV
Sbjct: 543 SADKYV 548
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 2/182 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE-LLEEM 357
YN+LI +C++ + + LLVEM VG + Y+ ++ L K G++ADA L+ EM
Sbjct: 283 YNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLK-GRNADAANGLVHEM 341
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
+ D + Y+ FI + G + A F+ M+ G+ P +A+ I+G+F
Sbjct: 342 VSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNV 401
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
Y+ +V + S Y + + A N++ EM +G RPNV +Y +
Sbjct: 402 RKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTL 461
Query: 478 LK 479
+K
Sbjct: 462 IK 463
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 115/277 (41%), Gaps = 28/277 (10%)
Query: 215 RQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKG-IWRVVEVLNQVGGSCLVSGV---R 270
+ +L D Y V +N L K G + E+ +++ G + V
Sbjct: 589 QGILGDAKTYTVLMN--------------GLVKNGKVNDAEEIFHEMRGKGIAPDVFSYG 634
Query: 271 ALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
LI+ FS LG + A + + + V YN+L+ CR + + ++LL EM
Sbjct: 635 TLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGK 694
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P +TY ++ CK+G A+A +L +EM + PD+ Y + CR+ + A
Sbjct: 695 GFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 754
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL----SADKYKSSSNMLYSL 441
F + ++G A A I F F + E + S DK+ +++ Y++
Sbjct: 755 ITIF-ETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNI 813
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ K N AK + M K L P V Y +L
Sbjct: 814 MIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLL 850
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 74/179 (41%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y LIK ++ F +L EMR+ G P T YN ++ L K + +A L
Sbjct: 455 VVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLL 514
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM+ PDA TY FI G+F A + +M++ G+ P I Y
Sbjct: 515 EMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKG 574
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ +A ++ Y++L + KN A+ + EM G+ P+V Y
Sbjct: 575 KVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSY 633
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
LI E C++ M + G TY ++ L KNG+ DA E+ EM G+
Sbjct: 566 LINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKG 625
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
PD +Y I ++G A + F++MV+ GL + + + G+ E A
Sbjct: 626 IAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAK 685
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + + K + + Y + + K+ + A + EM GL P+ VY
Sbjct: 686 ELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVY 738
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 71/176 (40%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y I +F + EM + G P + ++ CK G+ +AC M+
Sbjct: 528 YGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMV 587
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ DA TY + + + GK + A F++M +G+ P + ++ I G+ +
Sbjct: 588 EQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQ 647
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
A +S+ ++Y++L ++ AK +L EM G PN Y
Sbjct: 648 KASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTY 703
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 58/131 (44%), Gaps = 5/131 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNI+I +C+ + + ++L M++ P +TY +L K G+ ++ + +E++
Sbjct: 811 YNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVI 870
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM-----VKRGLQPRLATHAAFIKGYFI 413
PD I Y + I + G A +QM V G + ++T A + G+
Sbjct: 871 AAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAK 930
Query: 414 FYRYEDAYKYV 424
E A K V
Sbjct: 931 VGEMEVAEKVV 941
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 68/176 (38%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ I M + + + L M G P Y ++ + ELL E+
Sbjct: 353 YDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIK 412
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
RN TY + C G D A+N +M G +P + + IK + R+
Sbjct: 413 KRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFG 472
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
DA + + ++ + Y+ L K A++ L EM++NG +P+ Y
Sbjct: 473 DAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTY 528
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%)
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
+P +TYN ++ LCK G A EL M N P ITY + ++G+ F+
Sbjct: 805 KPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFS 864
Query: 388 FFNQMVKRGLQPRLATHAAFIKGYF 412
F++++ G++P ++ I +
Sbjct: 865 VFDEVIAAGIEPDNIMYSVIINAFL 889
>gi|255660974|gb|ACU25656.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 372
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 89/187 (47%), Gaps = 2/187 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI + F+ + EM + C P +TYN ++ LCKN +A L++
Sbjct: 163 VHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVK 222
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
E+L + P ITY + + C + + A +NQ+ +G +P + H I G
Sbjct: 223 ELLDKGLDPGVITYSMLMKGLCLDHRVERALXLWNQVTSKGFKPDVQMHNILIHGLCSVG 282
Query: 416 RYEDAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + A + +++K + N++ ++ L K+ + A + + +++NGL P++ Y
Sbjct: 283 KMQLALS-LYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISY 341
Query: 475 RRVLKHL 481
L+ L
Sbjct: 342 NITLEGL 348
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 98/226 (43%)
Query: 282 YEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+E+ + + + R VS +NI+++ + + M++ G ++TY ++
Sbjct: 44 FELWEMMGSEGNRSVSSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGF 103
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
CKNG + +LE + DA Y I C+ D A + N M+K G +P +
Sbjct: 104 CKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNV 163
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
+ I G ++EDA + + S + + Y+ L + KN A N++ E
Sbjct: 164 HVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVKE 223
Query: 462 MMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSVE 507
++ GL P V Y ++K L H+ A L ++ +S V+
Sbjct: 224 LLDKGLDPGVITYSMLMKGLCLDHRVERALXLWNQVTSKGFKPDVQ 269
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 93/204 (45%), Gaps = 10/204 (4%)
Query: 276 FSVLGLYEMAKYVIKKTERKVSYYNILIKEMC--RRCDFKGPRDLLVEMRQVGCEPITLT 333
F+ GL + + T ++ L+K +C +R D + LL M + GC P +
Sbjct: 112 FAAFGLILKTGWRVNDT----VIFSQLLKGLCDAKRVD-EATDILLRRMPEFGCTPDVFS 166
Query: 334 YNYVLGVLCKNGQDADACELLEEML--GRNCH-PDAITYEIFIVYSCRVGKFDVAFNFFN 390
Y+ +L C + +A ELL M G H P+ +TY I C+ D A F
Sbjct: 167 YSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQ 226
Query: 391 QMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNN 450
M+ +G++P T+ I GY ++++ + + + +Y++L KN
Sbjct: 227 HMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNG 286
Query: 451 NPVMAKNVLSEMMKNGLRPNVSVY 474
A+N+ +++ G++PNV++Y
Sbjct: 287 RCTEARNIFDSVIRKGIKPNVTIY 310
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 80/154 (51%), Gaps = 2/154 (1%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++N L+ +CR + L+ M +VG P ++YN ++ C G+ +A +LL+ +
Sbjct: 449 FFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVI 508
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
+ PD +TY + C+ + D A++ F +M+ +GL P + T+ + G F R+
Sbjct: 509 VSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRF 568
Query: 418 EDAYKYVVLSADKYKSSSNM-LYSLLASLHDKNN 450
+A K + LS ++ N+ Y+++ + KNN
Sbjct: 569 SEA-KELYLSMINSRTQMNIYTYNIIINGLCKNN 601
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 78/195 (40%), Gaps = 35/195 (17%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
++ L+ +C ++ +L E+ G T+ +N ++ LC+ G+ +A L++ ML
Sbjct: 415 FSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLML 474
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD I+Y + C G+ D A + +V GL+P T+ + GY R +
Sbjct: 475 RVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRID 534
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DAY ++ EM+ GL P+V Y +L
Sbjct: 535 DAY-----------------------------------SLFREMLMKGLTPDVVTYNTIL 559
Query: 479 KHLHTSHQEHMAKCL 493
L + + AK L
Sbjct: 560 HGLFQTGRFSEAKEL 574
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/186 (19%), Positives = 80/186 (43%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y +I +C+ + + M G P TY ++ G+ + ++L+
Sbjct: 202 VVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQ 261
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM PD Y + + Y C+ G+ A N F+ ++++G++P + + + GY
Sbjct: 262 EMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEG 321
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ + ++ L S + +++++ + K A ++ +M + L PN+ Y
Sbjct: 322 SLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYG 381
Query: 476 RVLKHL 481
++ L
Sbjct: 382 ALIDAL 387
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 77/181 (42%), Gaps = 10/181 (5%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ C LL + +G +P +TYN +L CK + DA L EML
Sbjct: 485 YNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREML 544
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD +TY + + G+F A + M+ Q + T+ I G +
Sbjct: 545 MKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVD 604
Query: 419 DAYK--YVVLSAD---KYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
+A+K + + S D +++ M+ +LL K A ++ + + GL P+V
Sbjct: 605 EAFKMFHSLCSKDLQLDIFTANIMIGALL-----KGGRKEDAMDLFATISAYGLVPDVET 659
Query: 474 Y 474
Y
Sbjct: 660 Y 660
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/269 (18%), Positives = 104/269 (38%), Gaps = 40/269 (14%)
Query: 263 SCLVSGVRALIEMFSVLG-LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
+CL+ G ++ + V+ L EM+ + ++ Y +L+ +C+ R++
Sbjct: 241 TCLIHGYLSIGKWKEVVQMLQEMSTHGLQP---DCYIYAVLLDYLCKNGRCTEARNIFDS 297
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPD---------------- 365
+ + G +P Y +L G ++ L+ M+G PD
Sbjct: 298 VIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAM 357
Query: 366 -------------------AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAA 406
+TY I C++G+ D A FNQM+ G+ P + ++
Sbjct: 358 IDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSS 417
Query: 407 FIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNG 466
+ G ++E A + D+ + ++ L + + A+ ++ M++ G
Sbjct: 418 LVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVG 477
Query: 467 LRPNVSVYRRVLK-HLHTSHQEHMAKCLS 494
+RP+V Y ++ H T + AK L
Sbjct: 478 VRPDVISYNTLVDGHCLTGRIDEAAKLLD 506
>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
Length = 595
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 51/101 (50%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNILI CR+ +LL EM+ VG +P TYN +L LCK G + ELL M+
Sbjct: 385 YNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMI 444
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
C P +T+ + C+ GK D A F M + +QP
Sbjct: 445 DDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQP 485
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 86/220 (39%), Gaps = 41/220 (18%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+S +N L+ + R + +G +L MR +P +TY +L LCK+G DA ++L+
Sbjct: 131 ISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALKVLD 190
Query: 356 EM-----------------------LGR----------------NCHPDAITYEIFIVYS 376
M +GR C P+A+TY
Sbjct: 191 RMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLADAF 250
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
CRVG +A +M K G+ P + T I G R A ++ + +
Sbjct: 251 CRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPEARG 310
Query: 437 --MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ YS LAS NN MA + EM +G RP+ +Y
Sbjct: 311 NAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMY 350
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 2/162 (1%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M++ G + YN ++G C+ + +A ELLEEM G PD TY + C+ G
Sbjct: 373 MKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGD 432
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN-MLYS 440
F M+ G QP + T + GY + ++A + + S D+ + N ++Y+
Sbjct: 433 FSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALR-IFRSMDEARIQPNTVIYN 491
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLH 482
L K+ +A + EM + + NV+ Y +LK L
Sbjct: 492 TLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQ 533
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 73/188 (38%), Gaps = 8/188 (4%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L CR D ++ M + G P +T N ++G LC+ G+ A E E
Sbjct: 243 YNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREK- 301
Query: 359 GRNCHPD----AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
R P+ A+TY D+A F++M G +P + I G
Sbjct: 302 -RTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQA 360
Query: 415 YRYEDAYKYVV-LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
R DA + +K + Y++L + A +L EM GL+P+V
Sbjct: 361 GRLLDACTTAASMKKAGFKLDAKA-YNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYT 419
Query: 474 YRRVLKHL 481
Y +L L
Sbjct: 420 YNTLLSGL 427
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 92/249 (36%), Gaps = 11/249 (4%)
Query: 245 LTKKGIWRVVEVLNQV-GGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILI 303
+ K+G+ V +N + GG C V V A +E F + V + Y+ L
Sbjct: 266 MEKEGVAPNVITMNTIIGGLCRVGRVGAALEFF------REKRTVWPEARGNAVTYSTLA 319
Query: 304 KEM--CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
C D +L EM G P + Y ++ L + G+ DAC M
Sbjct: 320 SAFLHCNNVDMA--MELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAG 377
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
DA Y I I CR K A+ +M GLQP + T+ + G +
Sbjct: 378 FKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVD 437
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + D S + + L + K A + M + ++PN +Y ++ L
Sbjct: 438 ELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFL 497
Query: 482 HTSHQEHMA 490
S + +A
Sbjct: 498 CKSREVDVA 506
>gi|255661022|gb|ACU25680.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 376
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 89/188 (47%), Gaps = 2/188 (1%)
Query: 295 KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
K YN LI + F+ + EM C P +TYN ++ LCK + +A +L+
Sbjct: 163 KAHVYNALINGLVGASKFEDAFRVFHEMGTTHCSPTIVTYNTLINGLCKGERFGEAYDLV 222
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
+EML + + ITY + I C K ++A +NQ+ +G +P + H I G
Sbjct: 223 KEMLEKGWNSSVITYSLLIKGLCLGHKVEMALQLWNQVTSKGFKPDVQMHNILIHGLCSV 282
Query: 415 YRYEDAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
+ + A + + + + N++ ++ L K+ + A + + +++NGL+P++
Sbjct: 283 GKMQLALS-LYFDINHWNCAPNLVTHNTLMEGFYKDGDIRNALVIWARILRNGLQPDIIS 341
Query: 474 YRRVLKHL 481
Y LK L
Sbjct: 342 YNITLKGL 349
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 101/226 (44%)
Query: 282 YEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+E+ + + ++ R V+ +NI+++ + + + M+ G ++TY ++
Sbjct: 45 FELWELMGREGSRNVASFNIMMRGLFDNGEVDEVISIWELMKNSGFVEDSITYGILVHGF 104
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
CKN + +LE + DA Y I C+ K D A + N M+K G +P+
Sbjct: 105 CKNEYINKSLHVLEMAERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPKA 164
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
+ A I G ++EDA++ + S + + Y+ L + K A +++ E
Sbjct: 165 HVYNALINGLVGASKFEDAFRVFHEMGTTHCSPTIVTYNTLINGLCKGERFGEAYDLVKE 224
Query: 462 MMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSVE 507
M++ G +V Y ++K L H+ MA L ++ +S V+
Sbjct: 225 MLEKGWNSSVITYSLLIKGLCLGHKVEMALQLWNQVTSKGFKPDVQ 270
Score = 42.4 bits (98), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 62/130 (47%), Gaps = 1/130 (0%)
Query: 282 YEMAKYVIKKT-ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
Y++ K +++K V Y++LIK +C + L ++ G +P +N ++
Sbjct: 219 YDLVKEMLEKGWNSSVITYSLLIKGLCLGHKVEMALQLWNQVTSKGFKPDVQMHNILIHG 278
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
LC G+ A L ++ NC P+ +T+ + + G A + ++++ GLQP
Sbjct: 279 LCSVGKMQLALSLYFDINHWNCAPNLVTHNTLMEGFYKDGDIRNALVIWARILRNGLQPD 338
Query: 401 LATHAAFIKG 410
+ ++ +KG
Sbjct: 339 IISYNITLKG 348
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 46/108 (42%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +NILI +C + L ++ C P +T+N ++ K+G +A +
Sbjct: 269 VQMHNILIHGLCSVGKMQLALSLYFDINHWNCAPNLVTHNTLMEGFYKDGDIRNALVIWA 328
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
+L PD I+Y I + C + + F + + + + P + T
Sbjct: 329 RILRNGLQPDIISYNITLKGLCSCNRISDSILFLHDALTKKIVPTIIT 376
>gi|225436259|ref|XP_002275952.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Vitis vinifera]
Length = 566
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 3/132 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LIK + R +++ EM Q G P TY+ +L K+G++ LLE+M
Sbjct: 363 YNSLIKPLSRARKINEAKEVFDEMLQRGLSPTIRTYHAFFRIL-KSGEEV--FMLLEKMK 419
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
CHPD TY + I CR + D F +++M + G+ P +++ I G F+ + E
Sbjct: 420 ETGCHPDKDTYIMLIRRFCRWRQLDNVFKLWSEMSENGVGPDRSSYIVLIHGLFLNGKLE 479
Query: 419 DAYKYVVLSADK 430
+AYKY + +K
Sbjct: 480 EAYKYYIEMKEK 491
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 71/161 (44%), Gaps = 11/161 (6%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L +M+++ P YN V+ L K +A L++ M G+ PD++TY I
Sbjct: 312 LFNQMKEMEIAPDRKVYNAVVHALAKASFVKEALNLMKAMEGKGIAPDSVTYNSLIKPLS 371
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK----GYFIFYRYEDAYKYVVLSADKYKS 433
R K + A F++M++RGL P + T+ AF + G +F E K K
Sbjct: 372 RARKINEAKEVFDEMLQRGLSPTIRTYHAFFRILKSGEEVFMLLE---KMKETGCHPDKD 428
Query: 434 SSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ ML +N + SEM +NG+ P+ S Y
Sbjct: 429 TYIMLIRRFCRWRQLDN----VFKLWSEMSENGVGPDRSSY 465
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 95/460 (20%), Positives = 166/460 (36%), Gaps = 66/460 (14%)
Query: 35 FSCNLKTLVSPKPSPIPSLNSDQFQSKPTSN--PSYSFISSIGSSSFCHLTHPSCHSSQN 92
FS L++ V P SP P L S F PT P+ S+ P+ SS
Sbjct: 15 FSLLLRSHV-PIQSPKPILVSIDFWPSPTQTRTPTQPLPSA-----------PTLFSSLR 62
Query: 93 LYFSNCNGSCRSQISKLGLLTSRCISSFAMVNGPYATPKQVSEIIELLRSGDSETESKLL 152
+N NG+ + + G R + +I++ S S + KL
Sbjct: 63 YCSNNVNGNSDTNNGENGEFVRRIV-----------------DILQEPGSSMSLVKHKLE 105
Query: 153 SMSVSLSNASVIEIL-RVLNSEKVSALCFLKYMREIMPEFYKNSDICSLVIDNCGRLDDY 211
S V+ S+ V+E+L RV N + + FL ++ P + + +I G++ +
Sbjct: 106 SCGVAASSELVVEVLSRVRNHWEAAFTFFLWAAKQ--PGYAHSLRAYHSMISILGKMRKF 163
Query: 212 ETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRA 271
+T L+++ + + L ++I C V V
Sbjct: 164 DTAWALIDEMRGGRTGTSLVTPHTLSIMIRR--------------------YCAVHDVGK 203
Query: 272 LIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPI- 330
I F ++ K+ + E + L+ +CR + + LL R V P
Sbjct: 204 AINTFYA---HKQFKFGVGIEE-----FQNLLSALCRYKNVQDAEQLLFCNRNVF--PFD 253
Query: 331 TLTYNYVLGVLCKN-GQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFF 389
T ++N +L C G +A EM R D ++Y I +V + F
Sbjct: 254 TKSFNIILNGWCNVIGSMREAERFWREMSNRGIQRDVVSYSSIISCYSKVTNLNKVLKLF 313
Query: 390 NQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKN 449
NQM + + P + A + ++A + K + ++ Y+ L +
Sbjct: 314 NQMKEMEIAPDRKVYNAVVHALAKASFVKEALNLMKAMEGKGIAPDSVTYNSLIKPLSRA 373
Query: 450 NNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHM 489
AK V EM++ GL P + Y + L + + M
Sbjct: 374 RKINEAKEVFDEMLQRGLSPTIRTYHAFFRILKSGEEVFM 413
>gi|255660972|gb|ACU25655.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
Length = 376
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 89/187 (47%), Gaps = 2/187 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI + F+ + EM + C P +TYN ++ LCKN +A L++
Sbjct: 164 VHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVK 223
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
E+L + P ITY + + C + + A +NQ+ +G +P + H I G
Sbjct: 224 ELLDKGLDPGVITYSMLMKGLCLDHRVERALXLWNQVTSKGFKPDVQMHNILIHGLCSVG 283
Query: 416 RYEDAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + A + +++K + N++ ++ L K+ + A + + +++NGL P++ Y
Sbjct: 284 KMQLALS-LYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISY 342
Query: 475 RRVLKHL 481
L+ L
Sbjct: 343 NITLEGL 349
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 98/226 (43%)
Query: 282 YEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+E+ + + + R VS +NI+++ + + M++ G ++TY ++
Sbjct: 45 FELWEMMGSEGNRSVSSFNIMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGF 104
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
CKNG + +LE + DA Y I C+ D A + N M+K G +P +
Sbjct: 105 CKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNV 164
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
+ I G ++EDA + + S + + Y+ L + KN A N++ E
Sbjct: 165 HVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNKMFGEAYNLVKE 224
Query: 462 MMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSVE 507
++ GL P V Y ++K L H+ A L ++ +S V+
Sbjct: 225 LLDKGLDPGVITYSMLMKGLCLDHRVERALXLWNQVTSKGFKPDVQ 270
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI+ C ++L+ E+ G + ++ ++ LCK G+ DA + + +
Sbjct: 467 YNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTV 526
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
HPDA+ Y + + C VGK + A F+ MV G++P + + + GY R +
Sbjct: 527 NVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRID 586
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ + S +LYS++ + V AK EM ++G+ ++ Y VL
Sbjct: 587 EGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVL 646
Query: 479 KHL 481
+ L
Sbjct: 647 RGL 649
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 5/215 (2%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI +S G ++ A V K+ R V ++L+ +C+ K RD+ M G
Sbjct: 295 LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKG 354
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
P +YN +L G D +L + MLG PD T+ + I G D A
Sbjct: 355 QNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAM 414
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
FN+M G++P + T+ I + +DA + D+ + Y+ L
Sbjct: 415 IIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGF 474
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + + AK ++SE+M NG+ ++ + ++ +L
Sbjct: 475 CTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNL 509
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 82/188 (43%), Gaps = 4/188 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVG--CEPITLTYNYVLGVLCKNGQDADACELLEE 356
Y+IL+K +C + DLL M + G C P + YN V+ K G AC+L +E
Sbjct: 185 YSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKE 244
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
M+ R PD +TY + C+ D A F QMV + + P T+ I GY +
Sbjct: 245 MVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQ 304
Query: 417 YEDAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+++A + + + L L+ SL K A++V M G P+V Y
Sbjct: 305 WKEAVRVFKEMRRHSILPDVVTLSMLMGSLC-KYGKIKEARDVFDTMAMKGQNPDVFSYN 363
Query: 476 RVLKHLHT 483
+L T
Sbjct: 364 IMLNGYAT 371
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 2/156 (1%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML--GRNCHPDAITYEIFIVY 375
LL ++GC P +Y+ +L LC G+ A +LL M G C P+ + Y I
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG 228
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
+ G + A + F +MV+RG+ P L T+ + + + A ++ +K +
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 288
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
N Y+ L + A V EM ++ + P+V
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDV 324
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 90/229 (39%), Gaps = 51/229 (22%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK------------ 343
V YN +I + D DL EM Q G P +TYN V+ LCK
Sbjct: 219 VVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLR 278
Query: 344 -----------------------NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
GQ +A + +EM + PD +T + + C+ G
Sbjct: 279 QMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYG 338
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI---FYRYEDAYKYVV---LSADKYKSS 434
K A + F+ M +G P + ++ + GY D + ++ ++ D Y +
Sbjct: 339 KIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFY--T 396
Query: 435 SNMLYSLLAS--LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
N+L A+ + DK A + +EM +G++P+V YR V+ L
Sbjct: 397 FNVLIKAYANCGMLDK------AMIIFNEMRDHGVKPDVVTYRTVIAAL 439
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 83/220 (37%), Gaps = 8/220 (3%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
G CLV + + +F + V E V Y L+ C+ L E
Sbjct: 543 GYCLVGKMEKALRVFDAM--------VSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFRE 594
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M Q G +P T+ Y+ ++ L + G+ A EM D TY I + +
Sbjct: 595 MLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRC 654
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
FD A F ++ ++ + T I G F R E+A + S + YS+
Sbjct: 655 FDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSI 714
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + K A+++ S M G PN + V++ L
Sbjct: 715 MITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVREL 754
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 82/184 (44%), Gaps = 2/184 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y++L+ C + + M G EP + Y ++ CK G+ + L EML
Sbjct: 537 YSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREML 596
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R P I Y I I + G+ A F++M + G+ + T+ ++G F ++
Sbjct: 597 QRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFD 656
Query: 419 DA-YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+A + + L A K + L +++ + + AK++ + + ++ L P+V Y +
Sbjct: 657 EAIFLFKELRAMNVKINIITLNTMIDGMF-QTRRVEEAKDLFASISRSRLVPSVVTYSIM 715
Query: 478 LKHL 481
+ +L
Sbjct: 716 ITNL 719
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI+ C ++L+ E+ G + ++ ++ LCK G+ DA + + +
Sbjct: 480 YNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTV 539
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
HPDA+ Y + + C VGK + A F+ MV G++P + + + GY R +
Sbjct: 540 NVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRID 599
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ + S +LYS++ + V AK EM ++G+ ++ Y VL
Sbjct: 600 EGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVL 659
Query: 479 KHL 481
+ L
Sbjct: 660 RGL 662
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 5/215 (2%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI +S G ++ A V K+ R V ++L+ +C+ K RD+ M G
Sbjct: 308 LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKG 367
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
P +YN +L G D +L + MLG PD T+ + I G D A
Sbjct: 368 QNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAM 427
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
FN+M G++P + T+ I + +DA + D+ + Y+ L
Sbjct: 428 IIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGF 487
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + + AK ++SE+M NG+ ++ + ++ +L
Sbjct: 488 CTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNL 522
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 82/188 (43%), Gaps = 4/188 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVG--CEPITLTYNYVLGVLCKNGQDADACELLEE 356
Y+IL+K +C + DLL M + G C P + YN V+ K G AC+L +E
Sbjct: 198 YSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKE 257
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
M+ R PD +TY + C+ D A F QMV + + P T+ I GY +
Sbjct: 258 MVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQ 317
Query: 417 YEDAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+++A + + + L L+ SL K A++V M G P+V Y
Sbjct: 318 WKEAVRVFKEMRRHSILPDVVTLSMLMGSLC-KYGKIKEARDVFDTMAMKGQNPDVFSYN 376
Query: 476 RVLKHLHT 483
+L T
Sbjct: 377 IMLNGYAT 384
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 2/156 (1%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML--GRNCHPDAITYEIFIVY 375
LL ++GC P +Y+ +L LC G+ A +LL M G C P+ + Y I
Sbjct: 182 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG 241
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
+ G + A + F +MV+RG+ P L T+ + + + A ++ +K +
Sbjct: 242 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 301
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
N Y+ L + A V EM ++ + P+V
Sbjct: 302 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDV 337
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 90/229 (39%), Gaps = 51/229 (22%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK------------ 343
V YN +I + D DL EM Q G P +TYN V+ LCK
Sbjct: 232 VVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLR 291
Query: 344 -----------------------NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
GQ +A + +EM + PD +T + + C+ G
Sbjct: 292 QMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYG 351
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI---FYRYEDAYKYVV---LSADKYKSS 434
K A + F+ M +G P + ++ + GY D + ++ ++ D Y +
Sbjct: 352 KIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFY--T 409
Query: 435 SNMLYSLLAS--LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
N+L A+ + DK A + +EM +G++P+V YR V+ L
Sbjct: 410 FNVLIKAYANCGMLDK------AMIIFNEMRDHGVKPDVVTYRTVIAAL 452
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 88/221 (39%), Gaps = 10/221 (4%)
Query: 262 GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
G CLV + + +F + V E V Y L+ C+ L E
Sbjct: 556 GYCLVGKMEKALRVFDAM--------VSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFRE 607
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M Q G +P T+ Y+ ++ L + G+ A EM D TY I + +
Sbjct: 608 MLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRC 667
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML-YS 440
FD A F ++ ++ + T I G F R E+A K + S + + N++ YS
Sbjct: 668 FDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEA-KDLFASISRSRLVPNVVTYS 726
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
++ + K A+++ S M G PN + V++ L
Sbjct: 727 IMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVREL 767
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 82/184 (44%), Gaps = 2/184 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y++L+ C + + M G EP + Y ++ CK G+ + L EML
Sbjct: 550 YSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREML 609
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R P I Y I I + G+ A F++M + G+ + T+ ++G F ++
Sbjct: 610 QRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFD 669
Query: 419 DA-YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+A + + L A K + L +++ + + AK++ + + ++ L PNV Y +
Sbjct: 670 EAIFLFKELRAMNVKINIITLNTMIDGMF-QTRRVEEAKDLFASISRSRLVPNVVTYSIM 728
Query: 478 LKHL 481
+ +L
Sbjct: 729 ITNL 732
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 4/200 (2%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ Y+ILI C+ +LL EM P +TY+ ++ LCK+G+ + A +L++
Sbjct: 247 IQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVD 306
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM R P+ +TY + C+ + D A QM +G+QP + T+ IKG
Sbjct: 307 EMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSG 366
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM--AKNVLSEMMKNGLRPNVSV 473
+ EDA K V K + +Y+ + + + A +LS+M NG PN
Sbjct: 367 KLEDARK--VFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKT 424
Query: 474 YRRVLKHLHTSHQEHMAKCL 493
Y ++ L + MA+ L
Sbjct: 425 YEIIILSLFKKDENEMAEKL 444
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 86/192 (44%), Gaps = 10/192 (5%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQD----------AD 349
NILI C+ +L ++ ++G +P T+T N ++ LC NG+ D
Sbjct: 101 NILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKD 160
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A +L +M+ N +PD T+ I + C+ G+ A N M+ +G++P + T+ + +
Sbjct: 161 AVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMD 220
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
GYF+ + A A S YS+L + K A +L EM + P
Sbjct: 221 GYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIP 280
Query: 470 NVSVYRRVLKHL 481
NV Y ++ L
Sbjct: 281 NVVTYSSLIDGL 292
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 95/218 (43%), Gaps = 8/218 (3%)
Query: 264 CLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMR 323
C+V ++ +++F+ K +++ V + IL+ C+ K +++L M
Sbjct: 153 CIVGKLKDAVDLFN--------KMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMM 204
Query: 324 QVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
G +P +TYN ++ Q A + M PD +Y I I C++ D
Sbjct: 205 IQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMD 264
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
A +M + + P + T+++ I G + A K V D+ + + + YS +
Sbjct: 265 EAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSIL 324
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
KN+ A +L++M G++PN+ Y ++K L
Sbjct: 325 DALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGL 362
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 84/208 (40%), Gaps = 10/208 (4%)
Query: 311 DFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYE 370
D L + Q P + +N +LG L K+ L ++M R P+ +
Sbjct: 42 DVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCN 101
Query: 371 IFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADK 430
I I C++G AF+ +++K G +P T IKG + + D + V D
Sbjct: 102 ILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDA 161
Query: 431 YKSSSNML----------YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKH 480
+ M+ +++L K AKNVL+ MM G++P V Y ++
Sbjct: 162 VDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDG 221
Query: 481 LHTSHQEHMAKCLSSRYSSLSLGSSVEA 508
Q + AK + + + L + +++
Sbjct: 222 YFLVKQVNKAKSIFNTMAQLGVSPDIQS 249
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 51/115 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ILIK +C+ + R + ++ G TY ++ C G +A LL +M
Sbjct: 355 YTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKME 414
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
C P+A TYEI I+ + + ++A +M++ R+A I ++
Sbjct: 415 DNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTNDLIASIWV 469
>gi|410109941|gb|AFV61050.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rhodocnemis]
Length = 428
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ +L EM G P +T+ ++ CKNG+ A E+ +
Sbjct: 209 VYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDFAMEIYK 268
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
ML ++ PD ITY I C+ G A + ++M +GL+P T+ I G
Sbjct: 269 RMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEG 328
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ A+++ + ++ Y+ L S + V A+ +L EM+ GL+P+ Y
Sbjct: 329 DLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYT 388
Query: 476 RVL 478
++
Sbjct: 389 MII 391
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 79/180 (43%), Gaps = 8/180 (4%)
Query: 299 YNILIKEMCR--RCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
+ LI C+ R DF ++ M P +TYN ++ LCK G A +L++E
Sbjct: 247 FTTLIDGHCKNGRVDF--AMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDE 304
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
M + PD TY I C+ G D AF +M++ ++ +AA I G R
Sbjct: 305 MSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGR 364
Query: 417 YEDAYKYV--VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
DA K + +LS + Y+++ + K + +L EM +NG P+V Y
Sbjct: 365 SVDAEKMLREMLSVGLKPDTGT--YTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTY 422
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 77/181 (42%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ C+ D + + + + + G P ++YN ++ + G + L M
Sbjct: 141 FFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGHLDEGFRLKSAM 200
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
L PD TY + I C+ K D A F++M+ +GL P T I G+ R
Sbjct: 201 LASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRV 260
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ A + + + Y+ L K + A +++ EM GL+P+ Y +
Sbjct: 261 DFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTL 320
Query: 478 L 478
+
Sbjct: 321 I 321
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 54/147 (36%), Gaps = 35/147 (23%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL-------------------- 338
YN LI +C++ D K DL+ EM G +P TY ++
Sbjct: 282 YNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMI 341
Query: 339 ---------------GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
LC+ G+ DA ++L EML PD TY + I C+ G
Sbjct: 342 QENIRLDDVAYAALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVW 401
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKG 410
+M + G P + T+ + G
Sbjct: 402 KGSKLLKEMQRNGHAPSVVTYNVLMNG 428
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 57/113 (50%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+LI E+C+ + +L EM G P +TYN ++ LCK G A LLE++
Sbjct: 564 YNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLP 623
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
N HPD +TY I I + C+V D A ++ V G+ P T ++ +
Sbjct: 624 NENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMVQNF 676
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 65/141 (46%)
Query: 280 GLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
GL + V+ V YN LIK +C+ + LL EM G +P +YN ++
Sbjct: 510 GLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLIN 569
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
LCK G+ DA EL +EML + PD +TY I C+VG A N ++ + P
Sbjct: 570 ELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHP 629
Query: 400 RLATHAAFIKGYFIFYRYEDA 420
+ T+ I + +DA
Sbjct: 630 DIVTYNILISWHCKVRLLDDA 650
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 104/272 (38%), Gaps = 52/272 (19%)
Query: 252 RVVEV----LNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMC 307
RV EV LN V CL G ++ LYEM K V YNIL+ +C
Sbjct: 310 RVPEVNVVMLNTVIRGCLAEG-----KLARATELYEMMGS--KGCPPDVHTYNILMHGLC 362
Query: 308 RRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNG--QDA----------------- 348
+ +L EM + GC P +TY+ +L C+NG DA
Sbjct: 363 KLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQ 422
Query: 349 ----------------DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
+A L++EM + C PD TY I + C + D A + F +
Sbjct: 423 GYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNL 482
Query: 393 VKRGLQPRLATHAAFIKGYFIFYRYEDAYKY---VVLSADKYKSSSNMLYSLLASLHDKN 449
++ G+ T+ I R+++ + +VL S Y+ L K
Sbjct: 483 LEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVS---YNGLIKALCKE 539
Query: 450 NNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
N + +L EMM G++PN Y ++ L
Sbjct: 540 GNVDRSMMLLEEMMTKGIKPNNFSYNMLINEL 571
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 93/223 (41%), Gaps = 33/223 (14%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKN----------- 344
V+ +N ++ +C + L+ M GC P +TY ++L LC+
Sbjct: 250 VNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLG 309
Query: 345 --------------------GQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
G+ A A EL E M + C PD TY I + C++G+
Sbjct: 310 RVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGS 369
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV-VLSADKYKSSSNMLYSLLA 443
A ++M ++G P + T++ + + ++DA + +SA + +S ++
Sbjct: 370 AVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIY 429
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
+L K+ A ++ EM G +P++ Y ++ HL + Q
Sbjct: 430 AL-GKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQ 471
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI + ++ L EM GC ++YN ++ LCK G + LLEEM+
Sbjct: 494 YNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMM 553
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+ +Y + I C+ GK A +M+ +GL P + T+ I G
Sbjct: 554 TKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTH 613
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
A + ++ + Y++L S H K A +L + + G+ PN +
Sbjct: 614 AALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTW 669
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 57/126 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ + + +CR + LL M + GC P + Y V+ L G A+A LL+EML
Sbjct: 183 FGVAARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEML 242
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C D T+ ++ C +G A ++M+ G P + T+ ++G + +
Sbjct: 243 LMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQAD 302
Query: 419 DAYKYV 424
+AY +
Sbjct: 303 EAYAML 308
>gi|222613030|gb|EEE51162.1| hypothetical protein OsJ_31934 [Oryza sativa Japonica Group]
Length = 404
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 92/230 (40%), Gaps = 43/230 (18%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+ G C S A + +F EM + I + V YN LI +C + L+
Sbjct: 206 INGYCKNSNTAAAVRVFE-----EMKQQGIAAS---VVTYNSLISGLCSEGKVEEGVKLM 257
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
EM +G P +T+ VL CK G ADA + ++ M RN PD + Y I I R+
Sbjct: 258 EEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRL 317
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
GK + A M K+G+ P + T+ I G F R D ++S+S +
Sbjct: 318 GKMEDAMAVKEAMAKKGISPNVTTYNCLITG---FSRSGD-----------WRSASGL-- 361
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHM 489
L EM + G+ +V Y ++ L +E M
Sbjct: 362 -------------------LDEMKEKGIEADVVTYNVLIGALCCKGEESM 392
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 9/185 (4%)
Query: 296 VSYYNILIKEMCRRCDFKGPRD------LLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
V+ YN LI C++ G + LL EM + G P +T+ ++ CKN A
Sbjct: 161 VATYNSLIDGYCKK---GGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAA 217
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A + EEM + +TY I C GK + +M GL P T +K
Sbjct: 218 AVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLK 277
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
G+ DA ++ ++ ++Y++L ++ + A V M K G+ P
Sbjct: 278 GFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISP 337
Query: 470 NVSVY 474
NV+ Y
Sbjct: 338 NVTTY 342
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 78/186 (41%), Gaps = 11/186 (5%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE---LLEEMLGRNCHPDAITYEIFI 373
D+ +++ G P TYN ++ CK G + LL+EM+ P A+T+ + I
Sbjct: 147 DVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLI 206
Query: 374 VYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKS 433
C+ A F +M ++G+ + T+ + I G + E+ K + D S
Sbjct: 207 NGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLS 266
Query: 434 SSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV-------SVYRRVLKHLHT-SH 485
+ + + + K A + + M + + P+V VYRR+ K +
Sbjct: 267 PNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAV 326
Query: 486 QEHMAK 491
+E MAK
Sbjct: 327 KEAMAK 332
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 41/97 (42%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
+ E V YNILI R + + M + G P TYN ++ ++G
Sbjct: 298 RNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRS 357
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
A LL+EM + D +TY + I C G+ + F
Sbjct: 358 ASGLLDEMKEKGIEADVVTYNVLIGALCCKGEESMTF 394
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 96/225 (42%), Gaps = 2/225 (0%)
Query: 257 LNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPR 316
L+QVG L+ G+ + E + L L + + V Y+ +I MC+
Sbjct: 160 LDQVGYGTLIHGLCKVGETRAALDLLRRVDGNL--VQPNVVMYSTIIDGMCKDKHVNDAF 217
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
DL EM G P +TY+ ++ GQ DA +L +M+ N PD T+ I +
Sbjct: 218 DLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGF 277
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
C+ GK F M+K+G++P + T+ + + GY + A + + + +
Sbjct: 278 CKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDI 337
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y++L K A N+ EM + P+V Y ++ L
Sbjct: 338 QSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGL 382
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 2/224 (0%)
Query: 258 NQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRD 317
N V S L+SG + ++ + L+ K +++ + V +NIL+ C+ K +
Sbjct: 231 NVVTYSALISGFFTVGQLKDAIDLFN--KMILENIKPDVYTFNILVDGFCKDGKMKEGKT 288
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
+ M + G +P +TY ++ C + A +L M R +PD +Y I I C
Sbjct: 289 VFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFC 348
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
++ K D A N F +M + + P + T+ + I G + A K V D+ +
Sbjct: 349 KIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDII 408
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
YS + KN+ A +L+++ G+RPN+ Y ++ L
Sbjct: 409 TYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGL 452
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 113/253 (44%), Gaps = 15/253 (5%)
Query: 245 LTKKGIW-RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILI 303
+ K+GI VV + + G CLV V + LY M++ + + YNILI
Sbjct: 293 MMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSI-----LYTMSQ---RGVNPDIQSYNILI 344
Query: 304 KEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH 363
C+ +L EM P +TYN ++ LCK G+ + A +L++EM R
Sbjct: 345 DGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVP 404
Query: 364 PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK- 422
PD ITY + C+ + D A ++ +G++P + T+ I G R EDA+
Sbjct: 405 PDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNI 464
Query: 423 YVVLSADKYKSSSNMLYSLLASLHDKNNNPVM--AKNVLSEMMKNGLRPNVSVYRRVLKH 480
+ L Y + N Y+++ +H N + A +LS+M N P+ Y +++
Sbjct: 465 FEDLLVKGYNITVNT-YTVM--IHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRS 521
Query: 481 LHTSHQEHMAKCL 493
L + A+ L
Sbjct: 522 LFDKDENDKAEKL 534
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 92/219 (42%), Gaps = 47/219 (21%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQ----VGCEPITLT-------------------- 333
Y+ +L + ++ +F+G +L + +G P T+T
Sbjct: 92 YHTVL--SLSQQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLF 149
Query: 334 ---------------YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCR 378
Y ++ LCK G+ A +LL + G P+ + Y I C+
Sbjct: 150 HDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCK 209
Query: 379 VGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA---YKYVVLSADKYKSSS 435
+ AF+ +++MV +G+ P + T++A I G+F + +DA + ++L K +
Sbjct: 210 DKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYT 269
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+++L K+ K V + MMK G++PNV Y
Sbjct: 270 ---FNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTY 305
>gi|302761606|ref|XP_002964225.1| hypothetical protein SELMODRAFT_81759 [Selaginella moellendorffii]
gi|300167954|gb|EFJ34558.1| hypothetical protein SELMODRAFT_81759 [Selaginella moellendorffii]
Length = 580
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 6/184 (3%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
+I+ +G+ + V+K E + Y I + CR LL M + G
Sbjct: 381 VIDALCAMGMTDEGFVVVKAMEERGVKPDAVVYTIFLYAFCRSARLDDACRLLEMMVEAG 440
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
C P ++YN +L LC GQ+ +AC L + M+ P+ TY I C K + A
Sbjct: 441 CYPDVISYNTLLFALCSAGQEEEACRLFQVMVETGIEPNVFTYTQLIRALCSTKKLEGAR 500
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
+ FN M P + T+ A I G++ +A + + +D + S N SLL+ LH
Sbjct: 501 HLFNFMKLSKCVPDMETYKALILGHYQNEGVREARQLLEQESDAF-SRRNPGKSLLSELH 559
Query: 447 DKNN 450
+ N
Sbjct: 560 EAGN 563
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 101/227 (44%), Gaps = 37/227 (16%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY----------------NYVLGVLC 342
++ +I +C+ F +L + GCEP +TY + ++ LC
Sbjct: 281 FDCIIGGLCKTSKFDEALVVLKVSIEAGCEPDEVTYFKLAQERKCPATNLLYSRLMKCLC 340
Query: 343 KNGQDADACELLEEML-----------GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQ 391
K G+ AC+LLE++ G C PD + Y I I C +G D F
Sbjct: 341 KTGKVEAACQLLEDLTNGSRESEQLLGGDGCKPDVVMYSIVIDALCAMGMTDEGFVVVKA 400
Query: 392 MVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV--VLSADKYK---SSSNMLYSLLASLH 446
M +RG++P + F+ + R +DA + + ++ A Y S + +L++L ++
Sbjct: 401 MEERGVKPDAVVYTIFLYAFCRSARLDDACRLLEMMVEAGCYPDVISYNTLLFALCSAGQ 460
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
++ A + M++ G+ PNV Y ++++ L ++ + A+ L
Sbjct: 461 EEE-----ACRLFQVMVETGIEPNVFTYTQLIRALCSTKKLEGARHL 502
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 89/230 (38%), Gaps = 32/230 (13%)
Query: 263 SCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
+CL+ G+ + L LYE+ + + YN +I+ + + + +L M
Sbjct: 177 NCLIEGLCKGDRIDEALRLYELMRG--NNVPADIFTYNNMIECISKLGMVEQAEKVLKTM 234
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
+ C+P Y V+ CK G +A LL M PDA+ ++ I C+ KF
Sbjct: 235 EESDCKPDKFIYTRVINGFCKLGNFKNAVVLLGRMKEAGYAPDAVVFDCIIGGLCKTSKF 294
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
D A ++ G +P D Y L+ ++ ++N+LYS L
Sbjct: 295 DEALVVLKVSIEAGCEP-------------------DEVTYFKLAQERKCPATNLLYSRL 335
Query: 443 ASLHDKNNNPVMAKNVLSEMMK-----------NGLRPNVSVYRRVLKHL 481
K A +L ++ +G +P+V +Y V+ L
Sbjct: 336 MKCLCKTGKVEAACQLLEDLTNGSRESEQLLGGDGCKPDVVMYSIVIDAL 385
>gi|255660832|gb|ACU25585.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
gi|410109881|gb|AFV61020.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
virgata]
Length = 418
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y++LI +C+ L EM G P +T+ ++ CKN + A E+ +
Sbjct: 206 VYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAGHCKNRRVDLAMEIYK 265
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+ML ++ PD ITY I C+ G A + ++M +GL+P T+ I G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEG 325
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
E A+++ + ++ Y+ L S + + A+ VL EM+ GL+P+ Y
Sbjct: 326 DLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTGTYT 385
Query: 476 RVL 478
++
Sbjct: 386 MII 388
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 77/181 (42%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
++NIL+ C+ D + + + + + G P +++N ++ + G + L M
Sbjct: 138 FFNILMHRFCKEGDIRVAQLVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAM 197
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
PD TY + I C+ K D A F++M+ +GL P T I G+ R
Sbjct: 198 HASGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAGHCKNRRV 257
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ A + + S + Y+ L K + A +++ EM GL+P+ Y +
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTL 317
Query: 478 L 478
+
Sbjct: 318 I 318
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +N L+ R D L M G +P TY+ ++ LCK + DA L +
Sbjct: 171 VVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANGLFD 230
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
EML + P+ +T+ I C+ + D+A + QM+ + L P L T+ I G
Sbjct: 231 EMLDKGLVPNGVTFTTLIAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 285
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 80/183 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I +C+ + DLLVEM CEP + TY ++ LCK G+ +A LL EM
Sbjct: 13 YNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGEMK 72
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ D + Y I C G D F++M+++G+ P + ++ I G+ +
Sbjct: 73 RKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWR 132
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + ++ Y+ + K+ A ++ M + G P+ Y ++
Sbjct: 133 EATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLI 192
Query: 479 KHL 481
L
Sbjct: 193 NGL 195
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 106/241 (43%), Gaps = 14/241 (5%)
Query: 263 SCLVSGVRALIEMFSVLGLYEMAKYVIKK-TERKVS----YYNILIKEMCRRCDFKGPRD 317
SCL++G F GL+ A V+ TER + Y +I +C+ + D
Sbjct: 119 SCLING-------FCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALD 171
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L M + G EP T+TYN ++ LCK G DA ++ E ML + + ++Y I+ C
Sbjct: 172 LFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLC 231
Query: 378 RVGKFDVAFNFFNQMVKRG--LQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
GK D A F+ +++ G ++P + T I+G R + A + ++ +
Sbjct: 232 NNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGN 291
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSS 495
+L + K+ A + + K GL P+ + Y ++ H + AK L S
Sbjct: 292 LFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFS 351
Query: 496 R 496
R
Sbjct: 352 R 352
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 104/237 (43%), Gaps = 25/237 (10%)
Query: 206 GRLDD----YETM--RQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQ 259
GRLD Y+TM R + + + E ++ I KA+ +W+ V L
Sbjct: 271 GRLDKAVEIYDTMIERGSFGNLFTCHILIGE----YIKSGIIDKAME---LWKRVHKLGL 323
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSY-------YNILIKEMCRRCDF 312
V S S +I+ F + + AK + + K+S YN L+ +C+
Sbjct: 324 VPSSTTYS---VMIDGFCKMHMLNFAKGLFSRM--KISGLSPTLFDYNTLMASLCKESSL 378
Query: 313 KGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIF 372
+ R L EM++ CEP T+++N ++ K G A ELL +M PDA TY F
Sbjct: 379 EQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSF 438
Query: 373 IVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSAD 429
I ++G+ + A F+ M+ G+ P + + IKG+ + E+ + AD
Sbjct: 439 INRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMAD 495
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 2/194 (1%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K E V Y+ LI C + + L EM + G P + Y+ ++ CK G +
Sbjct: 74 KGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWRE 133
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A +L M R PD TY I C+ G+ A + F+ M ++G +P T+ I
Sbjct: 134 ATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLIN 193
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNG--L 467
G DA+K +K K + Y+ L N A + S ++++G +
Sbjct: 194 GLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYV 253
Query: 468 RPNVSVYRRVLKHL 481
P+V + V++ L
Sbjct: 254 EPDVITFNTVIQGL 267
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 74/153 (48%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M+++ P ++YN ++ LCK + A +LL EM G +C P++ TY I + C+ G+
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
+ A +M ++GL+ + ++ I G+ + +K S + ++YS
Sbjct: 61 VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
L + K A VL M + G++P+V Y
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTY 153
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 65/326 (19%), Positives = 117/326 (35%), Gaps = 81/326 (24%)
Query: 247 KKGIWR----VVEVLNQ-------------VGGSCLVSGVRALIEMFSVL---------- 279
KKG+WR V+ + + +GG C R +++F ++
Sbjct: 127 KKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTV 186
Query: 280 -------GL---------YEMAKYVIKKTER-KVSYYNILIKEMCRRCDFKGPRDLLVEM 322
GL +++ + +++K +R +V YN LI +C L +
Sbjct: 187 TYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSL 246
Query: 323 RQVG--CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN-------CH---------- 363
+ G EP +T+N V+ LCK G+ A E+ + M+ R CH
Sbjct: 247 LEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSG 306
Query: 364 ------------------PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
P + TY + I C++ + A F++M GL P L +
Sbjct: 307 IIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYN 366
Query: 406 AFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKN 465
+ E A + + + ++++ K + AK +L++M +
Sbjct: 367 TLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQM 426
Query: 466 GLRPNVSVYRRVLKHLHTSHQEHMAK 491
GL P+ Y + L Q AK
Sbjct: 427 GLTPDAYTYSSFINRLSKLGQMEEAK 452
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 67/141 (47%)
Query: 280 GLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
GL ++ ++ + V YN LIK +C+ + LL EM G +P +YN ++
Sbjct: 507 GLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLIN 566
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
LCK G+ DA EL +EML + PD +TY I C+VG A N ++ + P
Sbjct: 567 ELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHP 626
Query: 400 RLATHAAFIKGYFIFYRYEDA 420
+ T+ I + +DA
Sbjct: 627 DIVTYNILISWHCKVRLLDDA 647
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 57/113 (50%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+LI E+C+ + +L EM G P +TYN ++ LCK G A LLE++
Sbjct: 561 YNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLP 620
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
N HPD +TY I I + C+V D A ++ + G+ P T ++ +
Sbjct: 621 NENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQNF 673
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 7/228 (3%)
Query: 254 VEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFK 313
V +LN V CL G ++ LYEM K V Y+IL+ +C+ F
Sbjct: 313 VVMLNTVIRGCLTEG-----KLARATELYEMMGS--KGCPPDVHTYSILMHGLCKLGRFG 365
Query: 314 GPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFI 373
+L EM + GC P +TY+ +L C+NG DA +L++ML + ++ Y I
Sbjct: 366 SAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGII 425
Query: 374 VYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKS 433
C+ GK D A +M +G +P + T+ I E+A ++
Sbjct: 426 YALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVV 485
Query: 434 SSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
++ + Y+ L +N + SEM+ +G + +V Y ++K L
Sbjct: 486 ANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKAL 533
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 91/217 (41%), Gaps = 31/217 (14%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V+ +N L+ +C + L+ M GC P +TY ++L LC+ Q +AC +L
Sbjct: 247 VNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLG 306
Query: 356 ------------------------------EMLG-RNCHPDAITYEIFIVYSCRVGKFDV 384
EM+G + C PD TY I + C++G+F
Sbjct: 307 RLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGS 366
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLAS 444
A ++M ++G P + T++ + + ++DA + K S ++ Y+ +
Sbjct: 367 AVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIY 426
Query: 445 LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K+ A ++ EM G +P++ Y ++ HL
Sbjct: 427 ALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHL 463
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 77/176 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI + R ++ L EM GC+ ++YN ++ LCK G + LLEEM+
Sbjct: 491 YNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMV 550
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+ +Y + I C+ GK A +M+ +GL P + T+ I G
Sbjct: 551 TKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTH 610
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
A + ++ + Y++L S H K A +L + + G+ PN +
Sbjct: 611 AALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTW 666
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ + + +CR LL M + GC P + Y V+ L G A+A LL+EML
Sbjct: 180 FGVAARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEML 239
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
C D T+ ++ C +G+ A ++M+ +G P + T+ ++G
Sbjct: 240 LMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQG 291
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 99/244 (40%), Gaps = 5/244 (2%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEM 306
R+++ + + G + + L+ F G+++ A+ ++ + K YN +I +
Sbjct: 369 RMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYAL 428
Query: 307 CRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDA 366
C+ L+ EM+ GC+P TYN ++ LC N +A + ++ +
Sbjct: 429 CKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANG 488
Query: 367 ITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVL 426
ITY I R G++ ++M+ G Q + ++ IK + + +
Sbjct: 489 ITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEE 548
Query: 427 SADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
K +N Y++L + K A + EM+ GL P++ Y ++ L
Sbjct: 549 MVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGW 608
Query: 487 EHMA 490
H A
Sbjct: 609 THAA 612
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 73/192 (38%), Gaps = 31/192 (16%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
LL EM +GC T+N ++ LC G+ +A L++ M+ + C P +TY + C
Sbjct: 234 LLDEMLLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLC 293
Query: 378 RV-------------------------------GKFDVAFNFFNQMVKRGLQPRLATHAA 406
R GK A + M +G P + T++
Sbjct: 294 RTRQADEACAMLGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSI 353
Query: 407 FIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNG 466
+ G R+ A + + +K + + + YS L +N A+ +L +M+ G
Sbjct: 354 LMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKG 413
Query: 467 LRPNVSVYRRVL 478
N Y ++
Sbjct: 414 FSMNSQGYNGII 425
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 38/96 (39%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P T T+ LC+ G+ DA LL M C PDA+ Y+ I G A
Sbjct: 175 PTTFTFGVAARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAML 234
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV 424
++M+ G + T + G R +A + V
Sbjct: 235 LDEMLLMGCAADVNTFNDLVLGLCGLGRVREAARLV 270
>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 533
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 59/111 (53%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N+L+K +C++ D + +L E+ +G P +TY +LG G A +LEEML
Sbjct: 193 NLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLD 252
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
R +PDAITY + + C++G+F A + M K ++P T+ I+
Sbjct: 253 RGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRA 303
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 124/306 (40%), Gaps = 23/306 (7%)
Query: 198 CSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKAL--------TKKG 249
C+L++ + +D E+ ++L++ A G +P L++ + +
Sbjct: 192 CNLLVKALCKKNDIESAYKVLDEI---------PAMGLVPNLVTYTTILGGYVARGDMES 242
Query: 250 IWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKV-----SYYNILIK 304
RV+E + G L++ + LG + A V+ E+ Y ++I+
Sbjct: 243 AKRVLEEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIR 302
Query: 305 EMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHP 364
+C+ R++ EM P + V+ LC++ + +AC L +ML NC P
Sbjct: 303 ALCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMP 362
Query: 365 DAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV 424
D I + C+ G+ A F++ K G P L T+ I G +A +
Sbjct: 363 DNALLSTLIHWLCKEGRVSEARKLFDEFDK-GSIPSLLTYNTLIAGMCEKGELTEAGRLW 421
Query: 425 VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTS 484
++ + Y++L KN N VL EM+++G PN + + + + L
Sbjct: 422 DDMFERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLESGCFPNKTTFLILFEGLQKL 481
Query: 485 HQEHMA 490
+E A
Sbjct: 482 GKEEDA 487
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 1/126 (0%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
LI +C+ R L E + G P LTYN ++ +C+ G+ +A L ++M R
Sbjct: 370 LIHWLCKEGRVSEARKLFDEFDK-GSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMFERK 428
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
C P+A TY + I + G +M++ G P T +G + EDA
Sbjct: 429 CKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLESGCFPNKTTFLILFEGLQKLGKEEDAI 488
Query: 422 KYVVLS 427
K V ++
Sbjct: 489 KIVSMA 494
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI MC + + L +M + C+P TYN ++ L KNG + +LEEML
Sbjct: 401 YNTLIAGMCEKGELTEAGRLWDDMFERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEML 460
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
C P+ T+ I ++GK + A + V G
Sbjct: 461 ESGCFPNKTTFLILFEGLQKLGKEEDAIKIVSMAVMNG 498
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 64/161 (39%)
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P T N ++ LCK A ++L+E+ P+ +TY + G + A
Sbjct: 184 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESA 243
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
+M+ RG P T+ + GY R+ +A + + + Y ++
Sbjct: 244 KRVLEEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRA 303
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
K A+N+ EM+ P+ S+ +V+ L H+
Sbjct: 304 LCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHK 344
>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
Length = 876
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 83/184 (45%), Gaps = 3/184 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V + LI +C+ R L M Q G P +TYN ++ K G+ DA ++ E
Sbjct: 173 VRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKE 232
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M CHPD TY I C K + A N VK G P + T I GY +
Sbjct: 233 LMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAE 291
Query: 416 RYEDAYKYV-VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+++DA + + + K K + L+ SL K + AK +L+E+ NGL PNV Y
Sbjct: 292 KFDDALRMKNKMMSSKCKLDLQVFGKLINSLI-KKDRLKEAKELLNEISANGLVPNVITY 350
Query: 475 RRVL 478
++
Sbjct: 351 TSII 354
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 78/186 (41%), Gaps = 3/186 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y +I C+ ++L M + GC+P TYN ++ L K+ + A LL
Sbjct: 347 VITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLT 406
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M P+ ITY + C FD AF F M + GL+P +A
Sbjct: 407 KMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG 466
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R E+AY ++V K + + + Y+ L K N A ++ M+ G P+ Y
Sbjct: 467 RAEEAYSFIV---RKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYS 523
Query: 476 RVLKHL 481
+L L
Sbjct: 524 VLLHAL 529
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 76/184 (41%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
YY LI + + L+ M GC P + TY+ +L LCK + +A +L++M
Sbjct: 486 YYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQM 545
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
R Y I I R GK D A +N+M G +P T+ FI Y R
Sbjct: 546 SLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRL 605
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
EDA ++ + + + Y++L A + L M+ PN Y +
Sbjct: 606 EDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLL 665
Query: 478 LKHL 481
LKHL
Sbjct: 666 LKHL 669
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 107/253 (42%), Gaps = 24/253 (9%)
Query: 247 KKGIWRVVEVLNQV---GGSCLVSGVRALIEMFSVLGLYEMAKYVIKKT-----ERKVSY 298
+K + + +L+Q+ G C + LI+ G ++ AK + + + +
Sbjct: 532 QKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATT 591
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y + I C+ + DL+++M + G P +TYN ++ G A L+ M+
Sbjct: 592 YTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMV 651
Query: 359 GRNCHPDAITYEIFIVYSCR----------------VGKFDVAFNFFNQMVKRGLQPRLA 402
G +C P+ TY + + + + + + D+ + +MVK GL P +
Sbjct: 652 GASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVT 711
Query: 403 THAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM 462
T+++ I G+ R E+A + K S + +Y+LL A + +S M
Sbjct: 712 TYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIM 771
Query: 463 MKNGLRPNVSVYR 475
+ G +P + YR
Sbjct: 772 SECGFQPQLESYR 784
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
LL M + G P TY+ ++ CK G+ +AC LL+ M G+ P+ Y + I C
Sbjct: 697 LLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCC 756
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
F+ A +F + M + G QP+L ++ + G
Sbjct: 757 DTKFFEKALSFVSIMSECGFQPQLESYRLLVVG 789
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 3/180 (1%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N L+ CR + + L + M +GC+ +Y ++ LC A L M
Sbjct: 107 NALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKR 166
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
C P+ + I C+ G+ A F+ M + G+ P + T+ A I GY R D
Sbjct: 167 DGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMND 226
Query: 420 AYKYVVLSADKYKSSSNMLY-SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A K L + Y +L+ L D+ A+ +L+ +K G P V + ++
Sbjct: 227 ALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEE--AEELLNNAVKEGFTPTVVTFTNLI 284
>gi|48716454|dbj|BAD23061.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
[Oryza sativa Japonica Group]
Length = 580
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 83/186 (44%), Gaps = 6/186 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ CR D + L EM +G P TYN +L LC++G+ + LL EM
Sbjct: 288 YTTLVDGYCRAGDLEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMD 347
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R D +T I C+ G A +M++ GLQ T+ A + G F +
Sbjct: 348 ERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHG-FCKAKEL 406
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHD---KNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
D K + S N YS+L+ + D NN V + E+MK G P+ +VYR
Sbjct: 407 DEAKEALFEMMGAGFSPN--YSVLSWIVDGLCNKNNAVAVLAIPDELMKRGFPPDKAVYR 464
Query: 476 RVLKHL 481
+++ L
Sbjct: 465 SLIRRL 470
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 7/165 (4%)
Query: 245 LTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIK 304
+T+ G+ V N + CL +G AL E S++ + A + + +N +I
Sbjct: 171 MTRAGVAMNTHVYNAMLHVCLKAGDAALAE--SLMTRMDAAGVPLDRFS-----FNTVIA 223
Query: 305 EMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHP 364
CR+ + M G + +T+N ++ LCK + +A +LL EM P
Sbjct: 224 LYCRKGMQYEAMCVRERMENQGVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAP 283
Query: 365 DAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
D +TY + CR G + A +M G+ P +AT+ A ++
Sbjct: 284 DHVTYTTLVDGYCRAGDLEEAVKLRGEMEAMGMLPGVATYNAILR 328
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 47/114 (41%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ C+ + ++ L EM G P ++++ LC + +E++
Sbjct: 393 YKALVHGFCKAKELDEAKEALFEMMGAGFSPNYSVLSWIVDGLCNKNNAVAVLAIPDELM 452
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
R PD Y I C+ G D+A N FN+M +GL+ +A Y
Sbjct: 453 KRGFPPDKAVYRSLIRRLCKKGFIDLAGNVFNEMQGKGLEADCLVYATLACAYL 506
>gi|125600636|gb|EAZ40212.1| hypothetical protein OsJ_24656 [Oryza sativa Japonica Group]
Length = 661
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 128/297 (43%), Gaps = 24/297 (8%)
Query: 199 SLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIW-RVVEVL 257
SL++D R +E+ R LL + V ++ F +L + +G W + VL
Sbjct: 331 SLLVDAYTRAGRWESARILLKEMEADGV--KPSSYVFSRILAGFR---DRGEWQKAFAVL 385
Query: 258 NQVGGSCLVSGVRALIEMFSVL----GLYEMAKYVIKKTER--------KVSYYNILIKE 305
++ S GVR ++V+ G Y + + +R V +N LI
Sbjct: 386 REMHAS----GVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDA 441
Query: 306 MCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPD 365
C+ +L EMR+ C T TYN ++ +L + + +L EM + P+
Sbjct: 442 HCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPN 501
Query: 366 AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV- 424
ITY + R G+F A + M GL+P + A + Y + A V
Sbjct: 502 IITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVK 561
Query: 425 VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ AD ++S+ +L SL+ + ++ A +VL M +NGLRP+V Y ++K L
Sbjct: 562 AMRADGLEASTVVLNSLINAF-GEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKAL 617
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 75/186 (40%), Gaps = 3/186 (1%)
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
+ E ++ LI R +LL + +G P + ++ L + A+A
Sbjct: 216 RLEPDAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEA 275
Query: 351 CEL-LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
L LE L P Y + ++G A ++M + G+ P AT++ +
Sbjct: 276 EALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVD 335
Query: 410 GYFIFYRYEDAYKYV-VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLR 468
Y R+E A + + AD K SS + +LA D+ A VL EM +G+R
Sbjct: 336 AYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEW-QKAFAVLREMHASGVR 394
Query: 469 PNVSVY 474
P+ Y
Sbjct: 395 PDRHFY 400
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 97/261 (37%), Gaps = 53/261 (20%)
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDF 312
V +++ +G + V+ AL F + G + + + YN L+K +
Sbjct: 259 VTALISSLGSARRVAEAEALFLEFFLAG----------EIKPRTRAYNALLKGYVKIGSL 308
Query: 313 KGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQ-----------DAD------------ 349
K +L EM Q G P TY+ ++ + G+ +AD
Sbjct: 309 KNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRI 368
Query: 350 ------------ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
A +L EM PD Y + I + A + F++M + G+
Sbjct: 369 LAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGI 428
Query: 398 QPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSS----SNMLYSLLASLHDKNNNPV 453
+P + T I + R++ A + D+ + S Y+++ +L +
Sbjct: 429 EPDVVTWNTLIDAHCKGGRHDRAIELF----DEMRESNCPLGTTTYNIMINLLGEEQRWE 484
Query: 454 MAKNVLSEMMKNGLRPNVSVY 474
+ +L+EM + GL PN+ Y
Sbjct: 485 GVEAMLAEMKEQGLVPNIITY 505
>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
Length = 509
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 60/125 (48%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ +I +C+ +L +MR+ GC P +TY ++ CK G+ +A EL +
Sbjct: 366 VVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQ 425
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M R C D + Y I I CR K D A +M RG+QP + + + + G
Sbjct: 426 RMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKES 485
Query: 416 RYEDA 420
R E+A
Sbjct: 486 RVEEA 490
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 86/191 (45%), Gaps = 2/191 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI+ C+ +LL EM+ G P +T+ ++ LC+ A ++ +M+
Sbjct: 55 YGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMI 114
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PDA Y + I + C++ K D+A ++F +MV+ G P T+ + F ++E
Sbjct: 115 DMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWE 174
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
++ K S + Y+ + + + K A +++ + G P+ S+Y ++
Sbjct: 175 QGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLI 234
Query: 479 KHL--HTSHQE 487
L H H E
Sbjct: 235 DGLCKHDRHDE 245
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 104/261 (39%), Gaps = 40/261 (15%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L+EMA ++ V Y I +C+ + + V+M + GC P ++YN ++
Sbjct: 249 LFEMAAGDVQD----VIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYS 304
Query: 341 LCKNGQDADACELLEEMLGRNC------------------------------------HP 364
LCK+ + ++A EL+++ + R C P
Sbjct: 305 LCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAP 364
Query: 365 DAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV 424
+TY I C+ + D A+ +M + G P + T+ A I + R ++A +
Sbjct: 365 SVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELF 424
Query: 425 VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTS 484
++ + + Y++L + + A ++ EM G++PNV ++ L
Sbjct: 425 QRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKE 484
Query: 485 HQEHMAKCLSSRYSSLSLGSS 505
+ A+ L + + SL S
Sbjct: 485 SRVEEARLLMEKMNFESLPDS 505
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 95/224 (42%), Gaps = 3/224 (1%)
Query: 269 VRALIEM-FSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGC 327
+R L E+ F+ L + + K + Y ++I +C+ M Q GC
Sbjct: 94 IRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGC 153
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
P +TY ++ L K + ++ EEML + P+ +TY + C+ G+ D A +
Sbjct: 154 LPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALS 213
Query: 388 FFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHD 447
++ G P + ++ I G R+++A + ++A + ++Y+ S
Sbjct: 214 LMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFEMAAGDVQDV--IVYTSFISGLC 271
Query: 448 KNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
K AK V +M++ G P+ Y ++ L ++ AK
Sbjct: 272 KAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAK 315
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 59/150 (39%), Gaps = 1/150 (0%)
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN 390
T T N +L V +G +A + ++ L PD TY I C+ + A N
Sbjct: 17 TYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLLG 76
Query: 391 QMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNN 450
+M G+ P + T + I+ + A + D LY+++ K N
Sbjct: 77 EMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKIN 136
Query: 451 NPVMAKNVLSEMMKNGLRPNVSVYRRVLKH 480
+A + M+++G P+ Y VL H
Sbjct: 137 KLDLAASYFERMVQSGCLPDKVTY-TVLVH 165
>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
Length = 660
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 130/312 (41%), Gaps = 38/312 (12%)
Query: 190 EFYKNSDICSLVIDNCGRLDDYE------TMRQLLNDFNVYQVCLNEKAFGFLPVLISSK 243
EF N +V +N ++D E + L++ F + + + A L LIS
Sbjct: 71 EFRPNDKTAGIVFNNLLKIDGLEGRVKEDEIAGLVSKFGKHNIFPDTIA---LTQLISK- 126
Query: 244 ALTKKG----IWRVVEVLNQVGG-------SCLVSGVRALIEMFSVLGLYEMAKYVIKKT 292
L + G W +++ L + G + L++G+ E F + L M K
Sbjct: 127 -LCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTGLGKARE-FGKMNLL-MRKMKDMNI 183
Query: 293 ERKVSYYNILIKEMC--RRCD--------FKGPRDLLVEMRQVGCEPITLTYNYVLGVLC 342
+ V + ILI +C RR D KG + E +V P T+ YN ++ LC
Sbjct: 184 QPTVITFGILINHLCKFRRIDDALEVFEKMKGEK----EETKVFVAPDTIMYNTLIDGLC 239
Query: 343 KNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLA 402
K G+ +A L+ +M C P T+ I CR G+ +VA FN+M ++P +
Sbjct: 240 KVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVI 299
Query: 403 THAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM 462
T + G R A ++ + K +N+ Y++ + NN A L EM
Sbjct: 300 TLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEM 359
Query: 463 MKNGLRPNVSVY 474
K+G P+ VY
Sbjct: 360 SKDGCFPDAVVY 371
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ +N LI CR + + L EM EP +T N ++ +CK+ + + A E
Sbjct: 263 TATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFR 322
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M + + +TY +FI C V + A F ++M K G P + I G
Sbjct: 323 VMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAG 382
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R +DA V + + Y++L S K N A+ L+EM G++P+ Y
Sbjct: 383 RLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYN 442
Query: 476 RVLKHL 481
++ +
Sbjct: 443 TLISYF 448
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 87/226 (38%), Gaps = 40/226 (17%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLT------------------------- 333
Y + I C + + L EM + GC P +
Sbjct: 336 YTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLK 395
Query: 334 ----------YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
YN ++ CK + A E L EM PD++TY I Y ++G F
Sbjct: 396 EAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFK 455
Query: 384 VAFNFFNQMV-KRGLQPRLATHAAFIKGYFIFYRYEDA---YKYVVLSADKYKSSSNMLY 439
+A F +M + GL P + T+ A I Y + ++A +K + A K ++ ++Y
Sbjct: 456 LAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNT-VIY 514
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSH 485
++L K A ++L +M G+ PN + Y + K L +
Sbjct: 515 NILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKN 560
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 6/119 (5%)
Query: 264 CLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMR 323
CL + + I++F EM V K YNILI +C++ LL +M+
Sbjct: 485 CLNNNIDEAIKIFK-----EMNN-VASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMK 538
Query: 324 QVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
G P T TYN + L A +L++ M+ + C+PD IT EI + VG+
Sbjct: 539 FRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNPDYITMEILTEWLSAVGEI 597
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 5/208 (2%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI F LG E A+ + K + K V YNILI R+ +F DLL EM G
Sbjct: 803 LIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNG 862
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
P ++Y ++ LCK + +A + +M R P+ Y + I C GK + AF
Sbjct: 863 TMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAF 922
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
F +M K+G++ L T+ I G + + +A ++ + K Y+ L S +
Sbjct: 923 RFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGY 982
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
N + EM +G++P + Y
Sbjct: 983 RFAGNVQRCIALYEEMKTSGIKPTLKTY 1010
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 70/173 (40%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y I+ + D +L M+ P YN ++ LCK Q DA +L +EML
Sbjct: 555 YGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEML 614
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R P ITY I C+ G + +F +M ++P L T +KG F E
Sbjct: 615 ARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVE 674
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
DA + D+ +S+L + N+ A V + +GL+ N
Sbjct: 675 DAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNA 727
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 105/247 (42%), Gaps = 15/247 (6%)
Query: 244 ALTKKG-IWRVVEVLNQVGGSCLVSG---VRALIEMFSVLGLYEMAKYVIKKTERKVS-- 297
AL K+G I + E+L + LV +I+ +S G A+ I E++
Sbjct: 736 ALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKP 795
Query: 298 ---YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
YN LI+ C D + + +M+ G P TYN ++G + + +LL
Sbjct: 796 DHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLL 855
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
+EM P+ ++Y I C+ K A M RG+ P + + I G
Sbjct: 856 KEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSK 915
Query: 415 YRYEDAYKYVVLSADKYKSSSNM---LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
+ EDA+++ S + +K + Y+ L N A+++L E+ + GL+P+V
Sbjct: 916 GKIEDAFRF---SEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDV 972
Query: 472 SVYRRVL 478
Y ++
Sbjct: 973 FTYNSLI 979
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 73/183 (39%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN+LI +C+ K L EM P +TYN ++ CK+G + ++ E
Sbjct: 587 VFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRE 646
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M N P IT+ + + G + A N +M +G P T + GY
Sbjct: 647 RMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSND 706
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ + A + D + S+L + K A+ +L M GL PN +Y
Sbjct: 707 KADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYN 766
Query: 476 RVL 478
++
Sbjct: 767 TMI 769
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 93/218 (42%), Gaps = 6/218 (2%)
Query: 263 SCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYY--NILIKEMCRRCDFKGPRDLLV 320
S L G + + + LG+YE A + K++ Y +IL+ +C+ + ++L
Sbjct: 696 SILFDGYSSNDKADAALGVYETAV----DSGLKMNAYTCSILLNALCKEGQIEKAEEILG 751
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
G P + YN ++ + G A ++ M + PD + Y I C +G
Sbjct: 752 REMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELG 811
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+ A N+M +G+ P + T+ I GY Y ++ + + D + + Y
Sbjct: 812 DMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYG 871
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
L + K + + A+ V +M G+ PNV +Y ++
Sbjct: 872 TLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLI 909
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 8/160 (5%)
Query: 265 LVSGVRALIEMFSVLGLYE-MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMR 323
L+SG R + + LYE M IK T + Y++LI +C + + + + EM
Sbjct: 978 LISGYRFAGNVQRCIALYEEMKTSGIKPT---LKTYHLLIS-LCTKEGIELTKKIFGEM- 1032
Query: 324 QVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
+P L YN VL +G A L ++M+ ++ D TY I+ +VGK
Sbjct: 1033 --SLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLC 1090
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY 423
+ ++M R ++P T+ +KG+ Y AY +
Sbjct: 1091 EVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYVW 1130
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 68/176 (38%), Gaps = 2/176 (1%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
+L+ + + F+ ++ + + + P Y + K EL M
Sbjct: 521 TLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKH 580
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
P Y + I C+V + A F++M+ R L P L T+ I GY E
Sbjct: 581 DRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEK 640
Query: 420 AYKY-VVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
++K + AD + S +LL L K A+NVL+EM G P+ +
Sbjct: 641 SFKVRERMKADNIEPSLITFNTLLKGLF-KAGMVEDAENVLTEMKDQGFVPDAFTF 695
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 78/211 (36%), Gaps = 35/211 (16%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY-------------NYVLGV----- 340
+N L+K + + + ++L EM+ G P T+ + LGV
Sbjct: 660 FNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAV 719
Query: 341 -----------------LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
LCK GQ A E+L + + P+ + Y I R G
Sbjct: 720 DSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLV 779
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLA 443
A + M K+G++P + I+ + E+A + V K S S Y++L
Sbjct: 780 GARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILI 839
Query: 444 SLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + ++L EM NG PNV Y
Sbjct: 840 GGYGRKYEFDKCFDLLKEMEDNGTMPNVVSY 870
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 93/260 (35%), Gaps = 12/260 (4%)
Query: 231 KAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIK 290
K L I + + +G+ V + N + C G FS EM K K
Sbjct: 879 KGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFS----EEMFK---K 931
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
E + YN LI + D+L+E+ + G +P TYN ++ G
Sbjct: 932 GIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRC 991
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
L EEM P TY + I + G ++ F +M LQP L + +
Sbjct: 992 IALYEEMKTSGIKPTLKTYHLLISLCTKEG-IELTKKIFGEM---SLQPDLLVYNGVLHC 1047
Query: 411 YFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
Y + + A+ +K Y+ L K ++++ EM + P
Sbjct: 1048 YAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPE 1107
Query: 471 VSVYRRVLKHLHTSHQEHMA 490
Y ++K H +++M
Sbjct: 1108 ADTYDIIVKG-HCEMKDYMG 1126
>gi|255660970|gb|ACU25654.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 350
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 88/187 (47%), Gaps = 2/187 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI + F+ + EM + C P +TYN ++ CKN +A L++
Sbjct: 138 VHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGFCKNKMFGEAYNLVK 197
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
E+L + P ITY + + C K + A +NQ+ +G +P + H I G
Sbjct: 198 ELLDKGLDPGVITYSMLMEGLCFDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVG 257
Query: 416 RYEDAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + A + +++K + N++ ++ L K+ + A + + +++NGL P++ Y
Sbjct: 258 KMQLALS-LYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISY 316
Query: 475 RRVLKHL 481
L+ L
Sbjct: 317 NITLEGL 323
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 97/226 (42%)
Query: 282 YEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+E+ + + + R VS +N +++ + + M++ G ++TY ++
Sbjct: 19 FELWEMMGSEGNRSVSSFNTMMRGLFDNGKVDEVISIWELMKESGFVEDSITYGILVHGF 78
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
CKNG + +LE + DA Y I C+ D A + N M+K G +P +
Sbjct: 79 CKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNV 138
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
+ I G ++EDA + + S + + Y+ L + KN A N++ E
Sbjct: 139 HVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGFCKNKMFGEAYNLVKE 198
Query: 462 MMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSVE 507
++ GL P V Y +++ L H+ A L ++ +S V+
Sbjct: 199 LLDKGLDPGVITYSMLMEGLCFDHKVERALQLWNQVTSKGFKPDVQ 244
>gi|115472657|ref|NP_001059927.1| Os07g0548300 [Oryza sativa Japonica Group]
gi|28564790|dbj|BAC57720.1| putative crp1 protein [Oryza sativa Japonica Group]
gi|113611463|dbj|BAF21841.1| Os07g0548300 [Oryza sativa Japonica Group]
Length = 661
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 128/297 (43%), Gaps = 24/297 (8%)
Query: 199 SLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIW-RVVEVL 257
SL++D R +E+ R LL + V ++ F +L + +G W + VL
Sbjct: 331 SLLVDAYTRAGRWESARILLKEMEADGV--KPSSYVFSRILAGFR---DRGEWQKAFAVL 385
Query: 258 NQVGGSCLVSGVRALIEMFSVL----GLYEMAKYVIKKTER--------KVSYYNILIKE 305
++ S GVR ++V+ G Y + + +R V +N LI
Sbjct: 386 REMHAS----GVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDA 441
Query: 306 MCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPD 365
C+ +L EMR+ C T TYN ++ +L + + +L EM + P+
Sbjct: 442 HCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPN 501
Query: 366 AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV- 424
ITY + R G+F A + M GL+P + A + Y + A V
Sbjct: 502 IITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVK 561
Query: 425 VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ AD ++S+ +L SL+ + ++ A +VL M +NGLRP+V Y ++K L
Sbjct: 562 AMRADGLEASTVVLNSLINAF-GEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKAL 617
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 75/186 (40%), Gaps = 3/186 (1%)
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
+ E ++ LI R +LL + +G P + ++ L + A+A
Sbjct: 216 RLEPDAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEA 275
Query: 351 CEL-LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
L LE L P Y + ++G A ++M + G+ P AT++ +
Sbjct: 276 EALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVD 335
Query: 410 GYFIFYRYEDAYKYV-VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLR 468
Y R+E A + + AD K SS + +LA D+ A VL EM +G+R
Sbjct: 336 AYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEW-QKAFAVLREMHASGVR 394
Query: 469 PNVSVY 474
P+ Y
Sbjct: 395 PDRHFY 400
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 97/261 (37%), Gaps = 53/261 (20%)
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDF 312
V +++ +G + V+ AL F + G + + + YN L+K +
Sbjct: 259 VTALISSLGSARRVAEAEALFLEFFLAG----------EIKPRTRAYNALLKGYVKIGSL 308
Query: 313 KGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQ-----------DAD------------ 349
K +L EM Q G P TY+ ++ + G+ +AD
Sbjct: 309 KNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRI 368
Query: 350 ------------ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
A +L EM PD Y + I + A + F++M + G+
Sbjct: 369 LAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGI 428
Query: 398 QPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSS----SNMLYSLLASLHDKNNNPV 453
+P + T I + R++ A + D+ + S Y+++ +L +
Sbjct: 429 EPDVVTWNTLIDAHCKGGRHDRAIELF----DEMRESNCPLGTTTYNIMINLLGEEQRWE 484
Query: 454 MAKNVLSEMMKNGLRPNVSVY 474
+ +L+EM + GL PN+ Y
Sbjct: 485 GVEAMLAEMKEQGLVPNIITY 505
>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
Length = 479
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 95/221 (42%), Gaps = 12/221 (5%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
LI LG AK ++ + E K V Y LI +C+ + +LL EM
Sbjct: 196 TLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIIN 255
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G EP TY+ ++ LCK+G + A ELLE M+ R P+ +TY I C+ GK A
Sbjct: 256 GIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREA 315
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
++M +GL+P + I G Y++A ++ A S + ++ +
Sbjct: 316 VEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAANFIDEMALGGISPNRASWTFHVKM 375
Query: 446 HD-------KNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
H+ N +P A + M G+ + + ++K
Sbjct: 376 HNMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIGTFDCLVK 416
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 95/222 (42%), Gaps = 45/222 (20%)
Query: 281 LYEMAKYVIKKTERK-VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
++M + +K T++ ++ ++IL++E K EMR+ G P ++ N ++
Sbjct: 108 FHKMEDFQVKPTQKSYLTVFDILVEEN----HVKRAIGFYKEMREKGIPPTVVSLNILIK 163
Query: 340 VLCKNGQDAD-ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
LCKN + + A L EM R C PD+ TY I C++GK A ++M ++GL
Sbjct: 164 ALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLS 223
Query: 399 PRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNV 458
P + ++ + I G ++NN A +
Sbjct: 224 PSVVSYTSLIHGLC-----------------------------------QSNNLDEAIEL 248
Query: 459 LSEMMKNGLRPNVSVYRRVLKHL----HTSHQEHMAKCLSSR 496
L EM+ NG+ PNV Y ++ L H+S + + + R
Sbjct: 249 LEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRR 290
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 2/177 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI +C+ ++LL EM + G P ++Y ++ LC++ +A ELLEEM+
Sbjct: 194 YGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMI 253
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ TY + C+ G A MV+R L P + T++ I G ++
Sbjct: 254 INGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHR 313
Query: 419 DAYKYV-VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+A + + + K + M +++ L N A N + EM G+ PN + +
Sbjct: 314 EAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQ-EAANFIDEMALGGISPNRASW 369
>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
Length = 479
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPR-DLLVEMRQVGCEPITLTYNYVLG 339
+ EMA+ +K V YN++I +C K R +E + EP +TYN +LG
Sbjct: 58 IAEMAR---EKLVPDVFTYNVVIDTLC-----KARRISRAIEFFETMPEPDVVTYNTLLG 109
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
LCKNG+ A AC L M G P +TY I C++ +F+ A+ M R P
Sbjct: 110 GLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSP 169
Query: 400 RLATHAAFIKGYFIFYRYEDAY------KYVVLSADKYKSSSNMLYSLLAS--LHDKNNN 451
+ ++ + I G + + AY K D+ + + +++ L LH+
Sbjct: 170 TVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRV-TYNTLIHGLCVKQRLHE---- 224
Query: 452 PVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
AK++L+ M++NG +P+ + +++ L T+ +
Sbjct: 225 ---AKDLLTVMVENGFQPDKITFTALIEGLCTTDR 256
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 91/217 (41%), Gaps = 11/217 (5%)
Query: 272 LIEMFSVLGLYEMAKYVI-----KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI++F + +E A ++ +K V Y +I +C+ L EM+ G
Sbjct: 142 LIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAG 201
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
C+P +TYN ++ LC + +A +LL M+ PD IT+ I C + AF
Sbjct: 202 CKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAF 261
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKS--SSNMLYSLLAS 444
F M K+G P L TH + I + A V Y + + +LY+ +
Sbjct: 262 VLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVV----RNYPACPEAVILYTPIFR 317
Query: 445 LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ A +L +M + G+ PNV Y K L
Sbjct: 318 ELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGL 354
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 116/289 (40%), Gaps = 46/289 (15%)
Query: 225 QVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEM 284
++C E A+G L ++ S K ++ ++N G C V ++F E
Sbjct: 148 KMCQFETAYGLLQLMASRKC--SPTVYSYCSIIN---GLCKNRKVDQAYQLF------EE 196
Query: 285 AKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKN 344
K K +R YN LI +C + +DLL M + G +P +T+ ++ LC
Sbjct: 197 MKLAGCKPDRVT--YNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTT 254
Query: 345 GQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK----------------------- 381
+ +A L + M + C PD +T+ + + C + K
Sbjct: 255 DRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYPACPEAVILYTP 314
Query: 382 ----------FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKY 431
FD A +M +RG+ P + T+ AF KG + AY+ ++
Sbjct: 315 IFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQG 374
Query: 432 KSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKH 480
+ Y++L K + MA+ ++ M ++GL PN+ Y ++ H
Sbjct: 375 IEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGH 423
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 79/193 (40%), Gaps = 4/193 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+K +CR + EM + P TYN V+ LCK + + A E E M
Sbjct: 38 YCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMP 97
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD +TY + C+ G+ A + F M G+ P T+ I + ++E
Sbjct: 98 ----EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFE 153
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
AY + L A + S + Y + + KN A + EM G +P+ Y ++
Sbjct: 154 TAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLI 213
Query: 479 KHLHTSHQEHMAK 491
L + H AK
Sbjct: 214 HGLCVKQRLHEAK 226
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 55/123 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI C+ C F+ LL M C P +Y ++ LCKN + A +L EEM
Sbjct: 139 YTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMK 198
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C PD +TY I C + A + MV+ G QP T A I+G R +
Sbjct: 199 LAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIK 258
Query: 419 DAY 421
+A+
Sbjct: 259 EAF 261
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 53/106 (50%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M + G EP + YN ++ CK + A +++ M P+ +TY + + CR GK
Sbjct: 370 MLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGK 429
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLS 427
+ + MV RG QP +AT + + G F+ + + AY ++ L+
Sbjct: 430 VEAIGELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAAYSFLNLA 475
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 8/158 (5%)
Query: 247 KKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLY--------EMAKYVIKKTERKVSY 298
++G R +L ++ + V F LG + E + + + E +
Sbjct: 322 RRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVA 381
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+L+ C+ ++ M Q G P +TYN ++G C+ G+ ELL M+
Sbjct: 382 YNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMV 441
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
R PD T+ + VG+ D A++F N + +G
Sbjct: 442 SRGRQPDVATWSTLVAGLFMVGQADAAYSFLNLAMSQG 479
>gi|302815817|ref|XP_002989589.1| hypothetical protein SELMODRAFT_21981 [Selaginella moellendorffii]
gi|300142767|gb|EFJ09465.1| hypothetical protein SELMODRAFT_21981 [Selaginella moellendorffii]
Length = 368
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 102/213 (47%), Gaps = 22/213 (10%)
Query: 295 KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
+V+Y++I + +C D++ +L ++ C L Y+ ++ LCK G+ AC+LL
Sbjct: 138 EVTYFSI-VDPLCNMEDWESALRVLELAQERKCPATNLLYSRLMKCLCKTGKVEAACQLL 196
Query: 355 EEML-----------GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
E++ G C PD + Y I I C +G D F M +RG++P
Sbjct: 197 EDLTNGSRGSEQLLGGDGCKPDVVMYSIVIDALCAMGMTDEGFVVVKAMEERGVKPDAVV 256
Query: 404 HAAFIKGYFIFYRYEDAYKY--VVLSADKYK---SSSNMLYSLLASLHDKNNNPVMAKNV 458
+ F+ + R +DA + +++ A Y S + +L++L ++ ++ A +
Sbjct: 257 YTIFLYAFCRSARLDDACRLLEIMVEAGCYPDVISYNTLLFALCSAGQEEE-----ACRL 311
Query: 459 LSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
M++ G+ PNV Y ++++ L ++ + A+
Sbjct: 312 FQVMVETGIEPNVFTYTQLIRALCSTKKLEGAR 344
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 62/144 (43%), Gaps = 5/144 (3%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
+I+ +G+ + V+K E + Y I + CR LL M + G
Sbjct: 225 VIDALCAMGMTDEGFVVVKAMEERGVKPDAVVYTIFLYAFCRSARLDDACRLLEIMVEAG 284
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
C P ++YN +L LC GQ+ +AC L + M+ P+ TY I C K + A
Sbjct: 285 CYPDVISYNTLLFALCSAGQEEEACRLFQVMVETGIEPNVFTYTQLIRALCSTKKLEGAR 344
Query: 387 NFFNQMVKRGLQPRLATHAAFIKG 410
+ FN M P + T+ A I G
Sbjct: 345 HLFNFMKLSKCVPDMETYKALILG 368
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 96/230 (41%), Gaps = 13/230 (5%)
Query: 263 SCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
+CL+ G+ + L LYE+ + + YN +I+ + + + +L M
Sbjct: 2 NCLIEGLCKGDRIDEALRLYELMRG--NNVPADIFTYNNMIECISKLGMVEQAEKVLKTM 59
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
+ C+P Y V+ CK G +A LL M PDA+ ++ I C+ KF
Sbjct: 60 EESDCKPDKFIYTRVINGFCKLGNFKNAVVLLGRMKEAGYAPDAVVFDCIIGGLCKTSKF 119
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
D A ++ G +P T+ + + +E A + + L+ ++ ++N+LYS L
Sbjct: 120 DEALVVLKVSIEAGCEPDEVTYFSIVDPLCNMEDWESALRVLELAQERKCPATNLLYSRL 179
Query: 443 ASLHDKNNNPVMAKNVLSEMMK-----------NGLRPNVSVYRRVLKHL 481
K A +L ++ +G +P+V +Y V+ L
Sbjct: 180 MKCLCKTGKVEAACQLLEDLTNGSRGSEQLLGGDGCKPDVVMYSIVIDAL 229
>gi|218191860|gb|EEC74287.1| hypothetical protein OsI_09537 [Oryza sativa Indica Group]
Length = 689
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 83/186 (44%), Gaps = 6/186 (3%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ CR D + L EM +G P TYN +L LC++G+ + LL EM
Sbjct: 380 YTTLVDGYCRAGDLEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMD 439
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R D +T I C+ G A +M++ GLQ T+ A + G F +
Sbjct: 440 ERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHG-FCKAKEL 498
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHD---KNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
D K + S N YS+L+ + D NN V + E+MK G P+ +VYR
Sbjct: 499 DEAKEALFEMMGAGFSPN--YSVLSWIVDGLCNKNNAVAVLAIPDELMKRGFPPDKAVYR 556
Query: 476 RVLKHL 481
+++ L
Sbjct: 557 SLIRRL 562
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 7/165 (4%)
Query: 245 LTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIK 304
+T+ G+ V N + CL +G AL E S++ + A + + +N +I
Sbjct: 263 MTRAGVAMNTHVYNAMLHVCLKAGDAALAE--SLMTRMDAAGVPLDRFS-----FNTVIA 315
Query: 305 EMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHP 364
CR+ + M G + +T+N ++ LCK + +A +LL EM P
Sbjct: 316 LYCRKGMQYEAMCVRERMENQGVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAP 375
Query: 365 DAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
D +TY + CR G + A +M G+ P +AT+ A ++
Sbjct: 376 DHVTYTTLVDGYCRAGDLEEAVKLRGEMEAMGMLPGVATYNAILR 420
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 47/114 (41%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ C+ + ++ L EM G P ++++ LC + +E++
Sbjct: 485 YKALVHGFCKAKELDEAKEALFEMMGAGFSPNYSVLSWIVDGLCNKNNAVAVLAIPDELM 544
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
R PD Y I C+ G D+A N FN+M +GL+ +A Y
Sbjct: 545 KRGFPPDKAVYRSLIRRLCKKGFIDLAGNVFNEMQGKGLEADCLVYATLACAYL 598
>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1245
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 5/207 (2%)
Query: 266 VSGVRALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLV 320
V+ LI + G ++ + Y+++K E+ + YN ++ C++ FK +LL
Sbjct: 193 VATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLD 252
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
M G TYN ++ LC++ + A LL +M R HP+ +TY + G
Sbjct: 253 HMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEG 312
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
K +A N+M+ GL P T A I G+ +++A K + K + + Y
Sbjct: 313 KVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYG 372
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGL 467
+L KN +A+ M +NG+
Sbjct: 373 VLLDGLCKNAEFDLARGFYMRMKRNGV 399
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 141/348 (40%), Gaps = 50/348 (14%)
Query: 181 LKYMREIMPEFYK-----NSDICSLVIDNCGRLDDY-ETMRQLLNDFNVYQVCLNE---- 230
LK +EI+ Y+ N I S +I NC R+ ET+R +Y+ + E
Sbjct: 454 LKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIR-------IYEAMILEGNTP 506
Query: 231 KAFGFLPVLISS--------------KALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMF 276
F F VL++S + +T GI + N V CL++G + E
Sbjct: 507 DHFTF-NVLVTSLCKAGKVAEAEEFMRCMTSDGI-----LPNAVSFDCLINGYGSSGEGL 560
Query: 277 SVLGLY-EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYN 335
++ EM K T Y L+K +C+ L ++ V T+ N
Sbjct: 561 KAFSVFDEMTKVGHHPT---FFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCN 617
Query: 336 YVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR 395
++ +CK+G A L EM+ R+ PD+ TY I CR GK +A F + R
Sbjct: 618 TLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEAR 677
Query: 396 G-LQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS-LLASLHDKNNNPV 453
G L P + F+ G F +++ + Y DK + +++ + + + +
Sbjct: 678 GNLVPNKVMYTCFVDGMFKAGQWKAGF-YFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIE 736
Query: 454 MAKNVLSEMMKNGLRPNVSVYRRVL------KHLHTSHQEHMAKCLSS 495
++L EM PN++ Y +L KH+ TS + + LS
Sbjct: 737 KTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSG 784
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 88/208 (42%), Gaps = 4/208 (1%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
S ++ILI+ R + ++ M G P T N +LG + K+ +D L+E
Sbjct: 124 SVFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWSFLKE 183
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
ML R PD T+ I I C G F + +M K G P + T+ + Y R
Sbjct: 184 MLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 243
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHD--KNNNPVMAKNVLSEMMKNGLRPNVSVY 474
++ A + + K ++ Y++L +HD ++N +L +M K + PN Y
Sbjct: 244 FKAAIELLDHMNLKGVNADVCTYNML--IHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTY 301
Query: 475 RRVLKHLHTSHQEHMAKCLSSRYSSLSL 502
+L + +A+ L + + L
Sbjct: 302 NTLLNGFSNEGKVLIARQLLNEMLTFGL 329
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +L+ +C+ +F R + M++ G +TY ++ LCKNG +A +L EM
Sbjct: 371 YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMS 430
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
PD +TY I CRVG+ A ++ + GL P ++ I
Sbjct: 431 KDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLI 480
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 3/135 (2%)
Query: 277 SVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNY 336
+V+ L EM+K I + + Y+ LI CR K ++++ + +VG P + Y+
Sbjct: 422 AVVMLNEMSKDGI---DPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYST 478
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
++ C+ G + + E M+ PD T+ + + C+ GK A F M G
Sbjct: 479 LIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 538
Query: 397 LQPRLATHAAFIKGY 411
+ P + I GY
Sbjct: 539 ILPNAVSFDCLINGY 553
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 134/354 (37%), Gaps = 63/354 (17%)
Query: 103 RSQISKLGLLTSRCISSFAMVNGPYATPKQVSEIIELL-RSGDSETESKLLSMSVSLSNA 161
R Q+ KLGL T +++ AM++G Y+ ++ + +LL G+ L + ++ L
Sbjct: 707 RQQMDKLGL-TRDVVTTNAMIDG-YSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGY 764
Query: 162 SVIEILRVLNSEKVSALCFLKYMREIMPEFYKNSDICSLVIDNCGRLDDYETMRQLLNDF 221
S K + F+ Y I+ + C +I + E ++L F
Sbjct: 765 S---------KRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAF 815
Query: 222 NVYQVCLNEKAFGFLPVLISSKALTKKGIW--RVVEVLNQVGGSCLVSGVRALIEMF--- 276
V ++ F +LIS + W +V V+ +G S + A++ +
Sbjct: 816 ICRGVEVDRHTFN---MLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRN 872
Query: 277 -----SVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFK------------------ 313
S + L+EM+K I RK Y L+ +CR D K
Sbjct: 873 HRFQESRMVLHEMSKQGISPESRK---YIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPN 929
Query: 314 -------------GPRD----LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
G D LL M ++ P ++ ++ + CKNG +A EL
Sbjct: 930 VAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVV 989
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
M D ++Y + I C G +AF F +M + G + T+ A + G
Sbjct: 990 MSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVGG 1043
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 64/333 (19%), Positives = 132/333 (39%), Gaps = 51/333 (15%)
Query: 189 PEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKK 248
P Y + I ++ +C + + ++++L ++C + F L ++ ++ KK
Sbjct: 156 PSVYTCNAILGSIVKSCEDVSVWSFLKEMLKR----KICPDVATFNILINVLCAEGSFKK 211
Query: 249 GIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVI-----KKTERKVSYYNILI 303
+ +++ + + G + + ++ + G ++ A ++ K V YN+LI
Sbjct: 212 SSY-LMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLI 270
Query: 304 KEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH 363
++CR LL +MR+ P +TYN +L G+ A +LL EML
Sbjct: 271 HDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLS 330
Query: 364 PDAIT-----------------------------------YEIFIVYSCRVGKFDVAFNF 388
P+ +T Y + + C+ +FD+A F
Sbjct: 331 PNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGF 390
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN---MLYSLLASL 445
+ +M + G+ T+ I G ++A VV+ + K + + YS L +
Sbjct: 391 YMRMKRNGVCVGRITYTGMIDGLCKNGFLDEA---VVMLNEMSKDGIDPDIVTYSALING 447
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ AK ++ + + GL PN +Y ++
Sbjct: 448 FCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLI 480
>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 100/248 (40%), Gaps = 40/248 (16%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
+I + LG E A V K+ + K + + +I C+ DF LL E+++
Sbjct: 245 TIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKER 304
Query: 326 G-----------------------------------CEPITLTYNYVLGVLCKNGQDADA 350
G C+P TYN ++ LCK G+ A
Sbjct: 305 GLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVA 364
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
L+E + P+ ++Y I C+ ++D+A QM +RG +P + T+ I G
Sbjct: 365 VGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHG 424
Query: 411 YFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
+ +DA V D+ S +Y++L S K + AK + SEM+ + P+
Sbjct: 425 LVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPD 484
Query: 471 VSVYRRVL 478
VY ++
Sbjct: 485 AYVYATLI 492
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 93/212 (43%), Gaps = 5/212 (2%)
Query: 272 LIEMFSVLGLYEMA-KYVIKKTER----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI+ + Y++A K +++ ER + Y ILI + ++ V++ G
Sbjct: 386 LIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRG 445
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
P YN ++ LCK G+ A L EML RN PDA Y I R G FD A
Sbjct: 446 VSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEAR 505
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
F+ V++G++ + H A IKG+ ++A + +++ YS + +
Sbjct: 506 KVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGY 565
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
K + A + M KN +PNV Y ++
Sbjct: 566 VKQQDMATAIKIFRYMEKNKCKPNVVTYTSLI 597
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 67/132 (50%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI+ C+ ++ LL++M + GC+P +TY ++ L +G DA + +++
Sbjct: 383 YAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLI 442
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R PDA Y + + C+ G+F A F++M+ R + P +A I G+ ++
Sbjct: 443 DRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFD 502
Query: 419 DAYKYVVLSADK 430
+A K LS +K
Sbjct: 503 EARKVFSLSVEK 514
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 59/144 (40%), Gaps = 5/144 (3%)
Query: 271 ALIEMFSVLGLYEMAKYVI-----KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
LI+ F G ++ A+ V K + V ++N +IK CR + M +
Sbjct: 490 TLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEE 549
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
P TY+ ++ K A A ++ M C P+ +TY I C G F +A
Sbjct: 550 HLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMA 609
Query: 386 FNFFNQMVKRGLQPRLATHAAFIK 409
F +M R L P + T+ I+
Sbjct: 610 EETFKEMQLRDLVPNVVTYTTLIR 633
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 96/243 (39%), Gaps = 37/243 (15%)
Query: 301 ILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGR 360
IL+K MC + R L+ GC P + YN ++G CK G +A + +E+ +
Sbjct: 210 ILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLK 269
Query: 361 NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL----------------------- 397
P T+ I C+ G F + +++ +RGL
Sbjct: 270 GFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDP 329
Query: 398 ------------QPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
+P +AT+ I + E A ++ ++ K +N+ Y+ L
Sbjct: 330 AESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQA 389
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSS 505
+ K+ +A +L +M + G +P++ Y ++ L S HM ++ + + G S
Sbjct: 390 YCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSG--HMDDAVNMKVKLIDRGVS 447
Query: 506 VEA 508
+A
Sbjct: 448 PDA 450
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 44/113 (38%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI R DF R + + G + + +N ++ C++G +A + M
Sbjct: 488 YATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMN 547
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
+ PD TY I + A F M K +P + T+ + I G+
Sbjct: 548 EEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGF 600
>gi|15240649|ref|NP_199839.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170477|sp|Q9FGR7.1|PP426_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g50280, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1006; Flags: Precursor
gi|9759030|dbj|BAB09399.1| unnamed protein product [Arabidopsis thaliana]
gi|332008538|gb|AED95921.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 723
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 85/172 (49%), Gaps = 15/172 (8%)
Query: 229 NEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSG-VRALIEMFSVLGLYEMAKY 287
+EKA+ S + + K+GI VE V + SG L+E++ + M +
Sbjct: 501 HEKAYA------SFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKL-----MLRE 549
Query: 288 VIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQD 347
IK T +++Y N L+ ++ + RD++ E ++G +P +TYN ++ + GQD
Sbjct: 550 KIKGT--RITY-NTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQD 606
Query: 348 ADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
A +LL+EM N PD+ITY I RV F AF + MVK G P
Sbjct: 607 AKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVP 658
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 127/337 (37%), Gaps = 44/337 (13%)
Query: 207 RLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLV 266
R DD + + ++ NVY + L + + K +W + E +++ G
Sbjct: 288 RYDDAWEVYEAMDKINVYP---DNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQ 344
Query: 267 SGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVE 321
L++ F GL E A + + E+K YN L+ + + L E
Sbjct: 345 DVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTE 404
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
MR G +P TYN ++ + Q LL EM P+ +Y I R K
Sbjct: 405 MRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKK 464
Query: 382 F-DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY--------KYVVLSADKYK 432
D+A + F +M K GL+P ++ A I Y + +E AY + + S + Y
Sbjct: 465 MSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYT 524
Query: 433 S---------------------------SSNMLYSLLASLHDKNNNPVMAKNVLSEMMKN 465
S + + Y+ L K + A++V+SE K
Sbjct: 525 SVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKM 584
Query: 466 GLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSL 502
GL+P+V Y ++ Q+ L ++L+L
Sbjct: 585 GLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNL 621
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 98/240 (40%), Gaps = 28/240 (11%)
Query: 270 RALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEP 329
RA +F++LG MA Y++ +L+ + + +F+ R
Sbjct: 239 RACSVLFTLLGRERMADYIL-----------LLLSNLPDKEEFRDVR------------- 274
Query: 330 ITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK-FDVAFNF 388
YN + L + + DA E+ E M N +PD +T I I + G+ +
Sbjct: 275 ---LYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEI 331
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
F +M ++G++ +K + E+A K S+ ++Y+ L ++K
Sbjct: 332 FEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNK 391
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSVEA 508
+N+ + + +EM GL+P+ + Y ++ Q + + L L L +V++
Sbjct: 392 SNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKS 451
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 1/210 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ C+ D + +L EM Q G TL++N ++ CK+ + +A +L +EM+
Sbjct: 667 YNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMI 725
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD +TY I + C+ GK + A F +M +R L T+ + + GY +
Sbjct: 726 AKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSS 785
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ + K + Y L+ H K +N V A + E++ G+ +++ ++
Sbjct: 786 EVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLI 845
Query: 479 KHLHTSHQEHMAKCLSSRYSSLSLGSSVEA 508
L A L L L S+ A
Sbjct: 846 TALCKREDLTEASKLLDEMGELGLKPSLAA 875
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 82/188 (43%), Gaps = 10/188 (5%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y+ LI + R LL M G P YN ++ L K G+ +A L
Sbjct: 384 VVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLL 443
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
E+ GR PDA+T+ FI+ + GK A +F++M+ GL P + I G+F
Sbjct: 444 EIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAG 503
Query: 416 RYEDA-----YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
+A + + + ++ S ++ LL KN A V SE+ + GL P+
Sbjct: 504 NLMEALSIFRHLHALGVLPDVQTCSAFIHGLL-----KNGRVQEALKVFSELKEKGLVPD 558
Query: 471 VSVYRRVL 478
V Y ++
Sbjct: 559 VFTYSSLI 566
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N LI C+ C + L EM P +TY V+ CK G+ +A L +EM
Sbjct: 701 FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQ 760
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
RN D +TY + ++G+ F F +MV +G++P T+ I +
Sbjct: 761 ERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLV 820
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A+K K + ++ LL + K + A +L EM + GL+P+++ ++
Sbjct: 821 EAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLV 880
Query: 479 KHLHTSHQEHMAKCLSSRYSSLSL 502
+ H + + A + SL L
Sbjct: 881 RSFHEAGKMDEATRVFEGVKSLGL 904
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 110/260 (42%), Gaps = 14/260 (5%)
Query: 232 AFGFLPVLISSKA----LTKKG-IWRVVEVLNQVGGSCLVSGV---RALIEMFSVLGLYE 283
A G LP + + A L K G + ++V +++ LV V +LI F G E
Sbjct: 517 ALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVE 576
Query: 284 MA-----KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
A + +K + YN L+ +C+ D + R L M + G EP ++TY+ ++
Sbjct: 577 KAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMI 636
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
CK+ A+A L EM + P + Y + C+ G + A N F +M+++G
Sbjct: 637 DGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA 696
Query: 399 PRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNV 458
L+ + I GY + ++A + K ++ Y+ + H K A +
Sbjct: 697 TTLSFN-TLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLL 755
Query: 459 LSEMMKNGLRPNVSVYRRVL 478
EM + L + Y ++
Sbjct: 756 FKEMQERNLIVDTVTYTSLM 775
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 84/194 (43%), Gaps = 1/194 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+LI +C+ + ++L M +GC+P + T+ ++ C+ A ELL+EM
Sbjct: 282 YNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEME 341
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
RN P A++Y I C +A +M GL+P + ++ I GY R E
Sbjct: 342 KRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIE 401
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR-V 477
+A + + + + Y+ + S K A L E+ GL+P+ + +
Sbjct: 402 EARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFI 461
Query: 478 LKHLHTSHQEHMAK 491
L + T AK
Sbjct: 462 LGYSKTGKMTEAAK 475
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 76/175 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +I +C D LL +M G +P + Y+ ++ G+ +A LL+ M
Sbjct: 352 YGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMS 411
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD Y I + GK + A + ++ RGL+P T AFI GY +
Sbjct: 412 CSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMT 471
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
+A KY D +N LY++L + H K N + A ++ + G+ P+V
Sbjct: 472 EAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQT 526
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 90/206 (43%), Gaps = 13/206 (6%)
Query: 208 LDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVS 267
+D Y+ M L NV+ V N+ L S +++ +KG+ V N + + +
Sbjct: 163 IDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEKGL-----VPNTYTYTIITA 217
Query: 268 GV-RALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
G+ RA + L EM K +K S LI R D L ++ V
Sbjct: 218 GLCRAKRMNEAKLTFEEMQKTGLKPDYNACS---ALIDGFMREGDID--EVLRIKDVMVS 272
Query: 327 CE-PITL-TYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
C PI L TYN ++ LCK G+ A E+L+ M+ C P++ T+ + I CR
Sbjct: 273 CGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGR 332
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKG 410
A ++M KR L P ++ A I G
Sbjct: 333 ALELLDEMEKRNLVPSAVSYGAMING 358
>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 11/200 (5%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI +C+ + K LL ++ +P + YN ++ LCKN DAC++ EM+
Sbjct: 166 YGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMI 225
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ PD +TY I C +GK AF+ N+M + + P + T + I E
Sbjct: 226 VKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDA----LGKE 281
Query: 419 DAYKYV--VLSADKYKSSSNMLYSLLA--SLHD---KNNNPVMAKNVLSEMMKNGLRPNV 471
K V +S + NM+ ++ SL D KN++ A +L EM ++G++P+V
Sbjct: 282 GKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDV 341
Query: 472 SVYRRVLKHLHTSHQEHMAK 491
Y +L L + +AK
Sbjct: 342 YSYTILLDGLCKGGRLEIAK 361
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 91/192 (47%), Gaps = 7/192 (3%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N LIK +C R + K ++ G + ++Y ++ LCK G+ LL ++ G
Sbjct: 132 NTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEG 191
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
+ PD + Y I C+ A + +++M+ +G+ P + T+ I G+ I + ++
Sbjct: 192 HSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKE 251
Query: 420 AYKYVVLSADKYKSSSNMLYS---LLASLHDKNNNPVM--AKNVLSEMMKNGLRPNVSVY 474
A+ +L+ K K+ + +Y+ L+ +L + ++ A ++ EM + P++ Y
Sbjct: 252 AFS--LLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTY 309
Query: 475 RRVLKHLHTSHQ 486
++ L +H
Sbjct: 310 NSLIDGLCKNHH 321
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Query: 277 SVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNY 336
+ L+E K+ K + YN LI +C+ + LL EM++ G +P +Y
Sbjct: 289 EAMSLFEEMKH--KNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTI 346
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
+L LCK G+ A E + +L + CH + Y + I C+ G F A + ++M +G
Sbjct: 347 LLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKG 406
Query: 397 LQPRLATHAAFI 408
P T I
Sbjct: 407 CMPNAITFRTII 418
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 93/228 (40%), Gaps = 5/228 (2%)
Query: 257 LNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPR 316
L+QV L++G+ E +V L + K + V YN +I +C+
Sbjct: 161 LDQVSYGTLINGLCKAGETKAVARL--LRKLEGHSVKPDVVMYNTIINSLCKNKLLGDAC 218
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
D+ EM G P +TY ++ C G+ +A LL EM +N +PD T+ + I
Sbjct: 219 DVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDAL 278
Query: 377 CRVGK---FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKS 433
+ GK D A + F +M + + P + T+ + I G + E A + +
Sbjct: 279 GKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQ 338
Query: 434 SSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y++L K +AK ++ G NV Y ++ L
Sbjct: 339 PDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGL 386
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 100/225 (44%), Gaps = 14/225 (6%)
Query: 248 KGIW-RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEM 306
KGI VV + G C++ ++ E FS+L EM +K V +++LI +
Sbjct: 227 KGISPDVVTYTTLIHGFCIMGKMK---EAFSLLN--EMK---LKNINPDVYTFSVLIDAL 278
Query: 307 CRRCDFKGPRD---LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH 363
+ K + L EM+ P +TYN ++ LCKN A LL+EM
Sbjct: 279 GKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQ 338
Query: 364 PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY 423
PD +Y I + C+ G+ ++A FF ++ +G + + I G + +A
Sbjct: 339 PDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDL 398
Query: 424 VVLSADKYKSSSNMLY-SLLASLHDKNNNPVMAKNVLSEMMKNGL 467
K + + + +++ +L +K+ N A+ +L EM+ GL
Sbjct: 399 KSKMEGKGCMPNAITFRTIICALSEKDEND-KAEKILREMIARGL 442
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 62/154 (40%), Gaps = 2/154 (1%)
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P T + ++ C A + +L R HPDAIT I C G+
Sbjct: 88 GITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKT 147
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV-VLSADKYKSSSNMLYSLLAS 444
F +Q+V +G Q ++ I G + + + L K M +++ S
Sbjct: 148 LYFHDQVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINS 207
Query: 445 LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
L KN A +V SEM+ G+ P+V Y ++
Sbjct: 208 L-CKNKLLGDACDVYSEMIVKGISPDVVTYTTLI 240
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 72/168 (42%), Gaps = 9/168 (5%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
+L++ MR P T +N +L L KN + L ++ PD T I I
Sbjct: 47 NLMLLMRP---PPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCF 103
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE---DAYKYVVLSADKYKS 433
C +AF+ F ++KRG P T IKG + +R E Y + + A ++
Sbjct: 104 CHQAHITLAFSVFANILKRGFHPDAITLNTLIKG--LCFRGEIKKTLYFHDQVVAQGFQL 161
Query: 434 SSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+L+ L +A+ +L ++ + ++P+V +Y ++ L
Sbjct: 162 DQVSYGTLINGLCKAGETKAVAR-LLRKLEGHSVKPDVVMYNTIINSL 208
>gi|147840993|emb|CAN64120.1| hypothetical protein VITISV_037241 [Vitis vinifera]
Length = 418
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 59/112 (52%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I C DF+ +L EM GC+P ++YN ++ LCK G+ +A +L E+M
Sbjct: 292 YNAMISGFCNEKDFEAAYGVLEEMVVKGCKPDVISYNVIISGLCKEGKWREANDLFEDMP 351
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
R C PD +Y I C +F+ A ++MV +G P+ A+ F++
Sbjct: 352 RRGCTPDVGSYRILFDGLCEGMQFNEAAFILDEMVFKGYAPKSASXTKFVEA 403
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
+L EMR+ GC+P T+TYN ++ C A +LEEM+ + C PD I+Y + I C
Sbjct: 276 VLEEMRENGCKPDTVTYNAMISGFCNEKDFEAAYGVLEEMVVKGCKPDVISYNVIISGLC 335
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+ GK+ A + F M +RG P + ++ G
Sbjct: 336 KEGKWREANDLFEDMPRRGCTPDVGSYRILFDG 368
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 79/192 (41%), Gaps = 1/192 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQV-GCEPITLTYNYVLGVLCKNGQDADACELL 354
V + LI +CR L +M +V +P Y ++ LC+ + + A EL
Sbjct: 183 VVTFGTLISGLCRDSRLDEASRLKEDMVKVFNVKPNAFVYASLMKGLCRVNELSLAFELK 242
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
+EM+ D+ Y I +VG+ D F +M + G +P T+ A I G+
Sbjct: 243 KEMVANKLRLDSGIYSTLIAALFKVGRKDEVFVVLEEMRENGCKPDTVTYNAMISGFCNE 302
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+E AY + K + Y+++ S K A ++ +M + G P+V Y
Sbjct: 303 KDFEAAYGVLEEMVVKGCKPDVISYNVIISGLCKEGKWREANDLFEDMPRRGCTPDVGSY 362
Query: 475 RRVLKHLHTSHQ 486
R + L Q
Sbjct: 363 RILFDGLCEGMQ 374
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 79/187 (42%), Gaps = 1/187 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YNILI C ++ EM + P +T+ ++ LC++ + +A L E
Sbjct: 148 VCTYNILINACCLSGRLGDAWNVFDEMLRKHVCPNVVTFGTLISGLCRDSRLDEASRLKE 207
Query: 356 EMLGR-NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
+M+ N P+A Y + CRV + +AF +MV L+ ++ I F
Sbjct: 208 DMVKVFNVKPNAFVYASLMKGLCRVNELSLAFELKKEMVANKLRLDSGIYSTLIAALFKV 267
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
R ++ + + + + Y+ + S + A VL EM+ G +P+V Y
Sbjct: 268 GRKDEVFVVLEEMRENGCKPDTVTYNAMISGFCNEKDFEAAYGVLEEMVVKGCKPDVISY 327
Query: 475 RRVLKHL 481
++ L
Sbjct: 328 NVIISGL 334
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 7/151 (4%)
Query: 234 GFLPVLISS--KALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMA-----K 286
G LI++ K K ++ V+E + + G A+I F +E A +
Sbjct: 255 GIYSTLIAALFKVGRKDEVFVVLEEMRENGCKPDTVTYNAMISGFCNEKDFEAAYGVLEE 314
Query: 287 YVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQ 346
V+K + V YN++I +C+ ++ DL +M + GC P +Y + LC+ Q
Sbjct: 315 MVVKGCKPDVISYNVIISGLCKEGKWREANDLFEDMPRRGCTPDVGSYRILFDGLCEGMQ 374
Query: 347 DADACELLEEMLGRNCHPDAITYEIFIVYSC 377
+A +L+EM+ + P + + F+ C
Sbjct: 375 FNEAAFILDEMVFKGYAPKSASXTKFVEALC 405
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
Query: 364 PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA--Y 421
P+ TY I I C G+ A+N F++M+++ + P + T I G R ++A
Sbjct: 146 PNVCTYNILINACCLSGRLGDAWNVFDEMLRKHVCPNVVTFGTLISGLCRDSRLDEASRL 205
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K ++ K ++ + SL+ L + N +A + EM+ N LR + +Y ++ L
Sbjct: 206 KEDMVKVFNVKPNAFVYASLMKGLC-RVNELSLAFELKKEMVANKLRLDSGIYSTLIAAL 264
>gi|357143144|ref|XP_003572818.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Brachypodium distachyon]
Length = 496
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 93/202 (46%), Gaps = 4/202 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y +I + R L EM + GC P TYN ++ V+CK G DA + +
Sbjct: 279 VVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCPPTIATYNALIQVICKKGNVEDAVTVFD 338
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M+ ++ P+ +TY + I C VGK D A +M G +P + T+ I+ F
Sbjct: 339 DMIRKDYIPNVVTYTVLIRGLCHVGKIDRAMKLMERMKNEGCEPVVQTYNVLIRYSFEEG 398
Query: 416 RYEDA-YKYVVLSADKYKSSSNMLYSLLAS---LHDKNNNPVMAKNVLSEMMKNGLRPNV 471
+ A + + +S + + Y+++ S + + + +A ++ EM++ G P
Sbjct: 399 EMDKALHLFERMSKGEECLPNQDTYNIVISAMFVRKRAEDMAIAARMVMEMVERGYLPRR 458
Query: 472 SVYRRVLKHLHTSHQEHMAKCL 493
+ RVL L + + +++ L
Sbjct: 459 FMLNRVLNGLMLTGNQQLSRDL 480
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 77/173 (44%), Gaps = 13/173 (7%)
Query: 243 KALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNIL 302
+AL ++ VV G C V +++ L +MA+ I T+ + YN++
Sbjct: 194 RALERRFPPDVVTYNTLADGWCRVKDTSRALDL-----LRQMAESGIAPTK---TTYNVI 245
Query: 303 IKEMCRRCDFKGPRDLLVEMRQVG-----CEPITLTYNYVLGVLCKNGQDADACELLEEM 357
+K R + + ++M++ G C+P ++Y ++ L GQ A +L +EM
Sbjct: 246 LKGFFRAGQLQHAWNFFLQMKKRGSKDENCKPDVVSYTTIIHGLGVAGQLDKARKLFDEM 305
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
C P TY I C+ G + A F+ M+++ P + T+ I+G
Sbjct: 306 SKEGCPPTIATYNALIQVICKKGNVEDAVTVFDDMIRKDYIPNVVTYTVLIRG 358
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
+I V G + A+ + + ++ ++ YN LI+ +C++ + + + +M +
Sbjct: 285 IIHGLGVAGQLDKARKLFDEMSKEGCPPTIATYNALIQVICKKGNVEDAVTVFDDMIRKD 344
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
P +TY ++ LC G+ A +L+E M C P TY + I YS G+ D A
Sbjct: 345 YIPNVVTYTVLIRGLCHVGKIDRAMKLMERMKNEGCEPVVQTYNVLIRYSFEEGEMDKAL 404
Query: 387 NFFNQMVKRGLQ--PRLATHAAFIKGYFIFYRYED 419
+ F +M K G + P T+ I F+ R ED
Sbjct: 405 HLFERMSK-GEECLPNQDTYNIVISAMFVRKRAED 438
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 18/152 (11%)
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
+N +L L K+ + A L+ L R PD +TY CRV A + QM
Sbjct: 173 FNSLLDALGKSRHASKAASLVRA-LERRFPPDVVTYNTLADGWCRVKDTSRALDLLRQMA 231
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN----------MLYSL-L 442
+ G+ P T+ +KG+F + + A+ + + + N +++ L +
Sbjct: 232 ESGIAPTKTTYNVILKGFFRAGQLQHAWNFFLQMKKRGSKDENCKPDVVSYTTIIHGLGV 291
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
A DK A+ + EM K G P ++ Y
Sbjct: 292 AGQLDK------ARKLFDEMSKEGCPPTIATY 317
>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 874
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 76/159 (47%), Gaps = 12/159 (7%)
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
C P +TY+ ++ LCK G+ DA + EM+ + PD+ Y+ FI CR GK AF
Sbjct: 520 CTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAF 579
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGY------FIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
M KRG L T+ + I G F Y D + +S D + N + +
Sbjct: 580 QVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPD--VCTYNHMLN 637
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
L N+ P +VL EM++ G+ PN+S +R ++K
Sbjct: 638 CLCEGGRINDAP----SVLDEMLQKGISPNISSFRILIK 672
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 6/169 (3%)
Query: 241 SSKALTKKGIWRVVEVLNQVG-GSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSY- 298
S K L I+R +++ ++G V + ++ F G+ E AK ++ +R ++
Sbjct: 265 SGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFI 324
Query: 299 ----YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
YNI + + R +L EM +G EP +YN V+ LCKNG +DA L+
Sbjct: 325 NLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLM 384
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
M+ PD +TY + C GK A N ++M+ P T
Sbjct: 385 GLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYT 433
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 54/126 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+L+K R + L +M P T+N ++G+LC +G DA EL ++M
Sbjct: 115 YNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARELFDKMP 174
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R C P+ T+ I + CR G QM G+ P + I + +
Sbjct: 175 ARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCKEGKTH 234
Query: 419 DAYKYV 424
DA K V
Sbjct: 235 DAEKLV 240
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 101/244 (41%), Gaps = 6/244 (2%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
I F G A V+K E++ + YN LI + + L+ EMR+
Sbjct: 564 TFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREK 623
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G P TYN++L LC+ G+ DA +L+EML + P+ ++ I I C+ F +
Sbjct: 624 GVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKAS 683
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
F ++ + A + + + +A + + D+ N LY L
Sbjct: 684 HEVF-EIALNVCGHKEALYTLMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDR 742
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSS 505
K+ A +VL ++ G + + + + V+ +H+A L+ R ++ S+
Sbjct: 743 LCKDEKLEAASDVLHRLIDKGYQFDPASFMPVIDGFGKMGNKHVADELAERMMEMASESN 802
Query: 506 VEAR 509
E +
Sbjct: 803 KENK 806
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 12/191 (6%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ IL++ CR +LL +MR +G P + YN ++ CK G+ DA +L+++M
Sbjct: 185 FGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMR 244
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV---KRGL-QPRLATHAAFIKGYFIF 414
P T+ I C GK A F M + GL P + T+ + G+
Sbjct: 245 EDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKE 304
Query: 415 YRYEDAYKYVVLSADKYKSSSNML----YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
E+A V D K ++N + Y++ +N + A VL EM+ G+ P+
Sbjct: 305 GMLEEAKTLV----DTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPD 360
Query: 471 VSVYRRVLKHL 481
+ Y V+ L
Sbjct: 361 IYSYNIVMDGL 371
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 53/116 (45%)
Query: 288 VIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQD 347
V+ + + +N+LI +C + R+L +M GCEP T+ ++ C+ G
Sbjct: 139 VLARVSPEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLA 198
Query: 348 ADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
+ ELL +M P+ + Y I C+ GK A ++M + GL P + T
Sbjct: 199 SKGLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVET 254
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 2/116 (1%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYN-YVLGVLCKNGQDADACELLE 355
+ Y+ I CR +L +M + GC TYN +LG+ KN Q + L++
Sbjct: 560 AIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKN-QIFELYGLID 618
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
EM + PD TY + C G+ + A + ++M+++G+ P +++ IK +
Sbjct: 619 EMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAF 674
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E + YNI++ +C+ R L+ M + G P T+TY+ +L C G+ +A
Sbjct: 358 EPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANN 417
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
LL EM+ NC P+ T + + + G+ A N +M ++G
Sbjct: 418 LLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKG 461
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 77/211 (36%), Gaps = 23/211 (10%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ L+ C + +LL EM C P T T N +L L K G+ ++A LL++M
Sbjct: 399 YSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMN 458
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG---------------------- 396
+ D +T I I C G+ D A N M G
Sbjct: 459 EKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGK 518
Query: 397 -LQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMA 455
P L T++ I G R +DA K + K + +Y + A
Sbjct: 519 KCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSA 578
Query: 456 KNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
VL +M K G + Y ++ L + +Q
Sbjct: 579 FQVLKDMEKRGCNKTLQTYNSLILGLGSKNQ 609
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 83/191 (43%), Gaps = 18/191 (9%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM- 357
YN LI C+ L+ +MR+ G P T+N + LC +G+ +A + +M
Sbjct: 220 YNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQ 279
Query: 358 ----LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
LG HP+ ITY++ ++ C+ G + A + M + L ++ ++ G
Sbjct: 280 IDEELGLP-HPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIR 338
Query: 414 FYRYEDAYKY------VVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
+ +A+ + + D Y Y+++ KN A+ ++ M++NG+
Sbjct: 339 NGKLLEAWIVLKEMLGIGIEPDIYS------YNIVMDGLCKNGMLSDARMLMGLMIRNGI 392
Query: 468 RPNVSVYRRVL 478
P+ Y +L
Sbjct: 393 LPDTVTYSTLL 403
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 54/116 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y +++ C+ + + L+ M++ +YN L L +NG+ +A +L+
Sbjct: 291 VITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLK 350
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
EMLG PD +Y I + C+ G A M++ G+ P T++ + GY
Sbjct: 351 EMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGY 406
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 6/150 (4%)
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
+P YN +L + + L ++M+ P+A T+ + I C G + A
Sbjct: 109 QPSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARE 168
Query: 388 FFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSS---SNMLYSLLAS 444
F++M RG +P T ++GY R A K + L +N+LY+ L S
Sbjct: 169 LFDKMPARGCEPNEFTFGILVRGY---CRAGLASKGLELLGQMRTMGILPNNVLYNTLIS 225
Query: 445 LHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
K A+ ++ +M ++GL P+V +
Sbjct: 226 SFCKEGKTHDAEKLVDKMREDGLVPHVETF 255
>gi|147742776|gb|ABQ50556.1| hypothetical protein [Brassica rapa]
Length = 348
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 64/125 (51%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N L+ +C + L+ M + GC+P TY +L +CK+G A +LL +M
Sbjct: 190 NTLVNGLCLKDQVSEAEALVDRMVEHGCQPDQFTYGPILNRICKSGNTVSALDLLRKMED 249
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
+ P +TY + I C+ G +D A + FN+M + G++ + T+ + I G+ R++D
Sbjct: 250 KKVKPQVVTYNMIIDSLCKNGNYDEALSLFNEMEREGIKADVITYNSLIGGFCNAGRWDD 309
Query: 420 AYKYV 424
+ +
Sbjct: 310 GAQLL 314
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 51/113 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ++ +C+ + DLL +M +P +TYN ++ LCKNG +A L EM
Sbjct: 224 YGPILNRICKSGNTVSALDLLRKMEDKKVKPQVVTYNMIIDSLCKNGNYDEALSLFNEME 283
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
D ITY I C G++D M+ R + P + T +A I +
Sbjct: 284 REGIKADVITYNSLIGGFCNAGRWDDGAQLLRDMITRNITPNVVTFSALIDCF 336
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 54/106 (50%)
Query: 277 SVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNY 336
+V L + K KK + +V YN++I +C+ ++ L EM + G + +TYN
Sbjct: 237 TVSALDLLRKMEDKKVKPQVVTYNMIIDSLCKNGNYDEALSLFNEMEREGIKADVITYNS 296
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
++G C G+ D +LL +M+ RN P+ +T+ I + GK
Sbjct: 297 LIGGFCNAGRWDDGAQLLRDMITRNITPNVVTFSALIDCFVKEGKL 342
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 88/198 (44%), Gaps = 5/198 (2%)
Query: 282 YEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNY 336
YE+ + K+ E + + +I+I CRR +L ++ ++G EP T+T++
Sbjct: 97 YELVLSLCKQMELQGIAHSIYTLSIVINCFCRRRKLGFAFSVLGKILKLGYEPDTVTFST 156
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
++ LC G+ ++A +++ M+ P+ +T + C + A ++MV+ G
Sbjct: 157 LVNGLCLEGRVSEAVVIVDRMVEMKVRPNLVTLNTLVNGLCLKDQVSEAEALVDRMVEHG 216
Query: 397 LQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAK 456
QP T+ + A + DK + Y+++ KN N A
Sbjct: 217 CQPDQFTYGPILNRICKSGNTVSALDLLRKMEDKKVKPQVVTYNMIIDSLCKNGNYDEAL 276
Query: 457 NVLSEMMKNGLRPNVSVY 474
++ +EM + G++ +V Y
Sbjct: 277 SLFNEMEREGIKADVITY 294
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 95/224 (42%), Gaps = 3/224 (1%)
Query: 265 LVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQ 324
L+ G+ + + LGLY+ +++ YN LI RR + L+ +M
Sbjct: 500 LIFGLCKVNKFEEALGLYQ--DMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLF 557
Query: 325 VGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
GC +TYN ++ LC+ G L E+M+ + +P+ I+ I I CR G
Sbjct: 558 RGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQH 617
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLAS 444
A F M+ RGL P + T+ + I G R ++A + + Y+ L S
Sbjct: 618 ALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLIS 677
Query: 445 LHDKNNNPVMAKNVLSEMMKNGLRPN-VSVYRRVLKHLHTSHQE 487
H K A +LS + +G PN V+ Y V + QE
Sbjct: 678 WHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 721
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 79/187 (42%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
M + IK E V Y ILI C+ + R++L EM G + YN ++ LCK
Sbjct: 412 MNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCK 471
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
+ + DA + +M + C PD T+ I C+V KF+ A + M+ G+ T
Sbjct: 472 DEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTIT 531
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
+ I + ++A K V + ++ Y+ L + N + +MM
Sbjct: 532 YNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMM 591
Query: 464 KNGLRPN 470
GL PN
Sbjct: 592 SKGLNPN 598
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 63/122 (51%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C++ R+L+ EM+ GCEP +TY ++ CK G+ +A +L+EM
Sbjct: 392 YNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMS 451
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
G+ +A+ Y I C+ K A N F M +G +P + T + I G ++E
Sbjct: 452 GKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFE 511
Query: 419 DA 420
+A
Sbjct: 512 EA 513
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 60/121 (49%), Gaps = 2/121 (1%)
Query: 279 LGLYEMAKYVIKKTER-KVSYYNILIKEMCRRCDFKGPRDLLVE-MRQVGCEPITLTYNY 336
+G + A+ ++ K V +N LI R + ++ E M VGC P TYN
Sbjct: 335 MGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNT 394
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
++ LCK G A EL+ EM + C P+ ITY I I C+ G+ + A N ++M +G
Sbjct: 395 LILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKG 454
Query: 397 L 397
L
Sbjct: 455 L 455
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 129/306 (42%), Gaps = 38/306 (12%)
Query: 196 DICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAF---------GFLPVLISSKALT 246
D+ ++ID G +++T+ LL + E F LP + L
Sbjct: 112 DVYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLD 171
Query: 247 KKGIWR----------VVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKV 296
+G++ V++VL + G+C + + +F YEM I T V
Sbjct: 172 MRGVYSCEPTFRSYNVVLDVL--LAGNC----PKVVPNVF-----YEMLSKGISPT---V 217
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
+ +++K +C + LL +M + GC P + Y ++ L K G+ + +LLEE
Sbjct: 218 YTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEE 277
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
ML C PD T+ I C++ + A ++M+ RG P T+ + G +
Sbjct: 278 MLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGK 337
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE-MMKNGLRPNVSVYR 475
++A + +K + + +L++ L + + AK V+ E M+ G P++ Y
Sbjct: 338 VDEARMLL----NKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYN 393
Query: 476 RVLKHL 481
++ L
Sbjct: 394 TLILGL 399
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 80/179 (44%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N LI C+R + ++ M +P + +YN +L C+ G ++A L ++ML
Sbjct: 371 NSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQ 430
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
P +TY + CRVG FD A ++ M+KRG+ P ++ + G F +E
Sbjct: 431 EGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEG 490
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + + S + ++ + S K V A+ + +M G P+ YR ++
Sbjct: 491 ASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLI 549
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 75/169 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +LI CR LL EM ++G + N ++ CK G+ +A ++ M+
Sbjct: 335 YGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMV 394
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
N PD+ +Y + CR G AFN ++M++ G++P + T+ +KG ++
Sbjct: 395 DWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFD 454
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
DA + L + + + YS L K N A + +++ G
Sbjct: 455 DALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGF 503
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 81/190 (42%), Gaps = 2/190 (1%)
Query: 286 KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNG 345
K + + E V YN L+K +CR F + M + G P + Y+ +L L K
Sbjct: 427 KMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKME 486
Query: 346 QDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
A L +++L R IT+ I C++GK A F++M G P T+
Sbjct: 487 NFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYR 546
Query: 406 AFIKGYFIFYRYEDAYKYV-VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMK 464
I GY A+K + + S M SL++ L K+ V ++L+EM
Sbjct: 547 TLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLF-KSRRLVEVTDLLTEMGI 605
Query: 465 NGLRPNVSVY 474
GL PN+ Y
Sbjct: 606 RGLTPNIVTY 615
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C+ + + L ++ Q G P +TYN ++ CK G A +L ++M+
Sbjct: 787 YNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMI 846
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
P +TY I C+ G + + NQM+K G+ +L + ++GY
Sbjct: 847 EEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYI 900
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 75/169 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNI I +C+ R + G P TY ++ G +A L +EML
Sbjct: 717 YNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEML 776
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R P+ +TY I C+ D A F+++ ++GL P + T+ I GY +
Sbjct: 777 RRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMD 836
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
A+K ++ S S + YS L + K+ + + +L++M+K G+
Sbjct: 837 AAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGV 885
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 74/175 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ L+ + + +F+G L ++ G +T+N ++ LCK G+ +A E+ ++M
Sbjct: 475 YSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMK 534
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C PD ITY I C+ AF M + + P + + + I G F R
Sbjct: 535 DLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLV 594
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
+ + + + + + Y L K A + EM +NGL N+ +
Sbjct: 595 EVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIII 649
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 89/219 (40%), Gaps = 6/219 (2%)
Query: 269 VRALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMR 323
V ++ F G + A +KK E + Y+ LI D + + +L M
Sbjct: 229 VSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMS 288
Query: 324 QVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH-PDAITYEIFIVYSCRVGKF 382
+ G +TY ++ CK + +A ++L M PD Y + I CR GK
Sbjct: 289 EKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKI 348
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
D A ++M++ GL+ L + I GY +A + D + Y+ L
Sbjct: 349 DDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTL 408
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + + A N+ +M++ G+ P V Y +LK L
Sbjct: 409 LDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGL 447
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 65/153 (42%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P + YN + LCK G+ DA + + PD TY I G D AF
Sbjct: 712 PNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRL 771
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
++M++RGL P + T+ A I G + A + K + + Y+ L + K
Sbjct: 772 RDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCK 831
Query: 449 NNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
N A + +M++ G+ P+V Y ++ L
Sbjct: 832 IGNMDAAFKLKDKMIEEGISPSVVTYSALINGL 864
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 1/154 (0%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M + G P + N +L L KNG+ A + ++M+ PD I + C+ GK
Sbjct: 182 MGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGK 241
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
D A F +M G++P + T+ + I GY E A + ++K S + + Y+L
Sbjct: 242 VDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTL 301
Query: 442 LASLHDKNNNPVMAKNVLSEMMKN-GLRPNVSVY 474
L + K A+ VL M + L P+ Y
Sbjct: 302 LIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAY 335
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 83/200 (41%), Gaps = 41/200 (20%)
Query: 258 NQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKK--TERKVSYYNILIKEMCRRCDFKGP 315
++VG S L+ G L +M + G + K ++ + T+ ++++ N +I +C+
Sbjct: 471 DEVGYSTLLDG---LFKMENFEGASTLWKDILARGFTKSRITF-NTMISGLCKMGKMVEA 526
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKN---GQD------------------------- 347
++ +M+ +GC P +TY ++ CK GQ
Sbjct: 527 EEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISG 586
Query: 348 -------ADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
+ +LL EM R P+ +TY I C+ G D AF+ + +M + GL
Sbjct: 587 LFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSAN 646
Query: 401 LATHAAFIKGYFIFYRYEDA 420
+ + + G + R ++A
Sbjct: 647 IIICSTMVSGLYRLGRIDEA 666
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 82/185 (44%), Gaps = 5/185 (2%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M +VG P + ++ CK+G+ +A +++M P+ +TY I +G
Sbjct: 216 QMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLG 275
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSS---SNM 437
+ A M ++G+ + T+ IKGY + ++A K VL + +++
Sbjct: 276 DVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEK--VLRGMQEEAALVPDER 333
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRY 497
Y +L + + A +L EM++ GL+ N+ + ++ + H A+ + +R
Sbjct: 334 AYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRM 393
Query: 498 SSLSL 502
+L
Sbjct: 394 VDWNL 398
Score = 38.9 bits (89), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 78/233 (33%), Gaps = 38/233 (16%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ YN LI + + DLL EM G P +TY ++ CK G A
Sbjct: 577 IEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYF 636
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF--- 412
EM + I + R+G+ D A +MV G P H F+K
Sbjct: 637 EMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFP---DHECFLKSDIRYA 693
Query: 413 ---------------------IFY-----------RYEDAYKYVVLSADKYKSSSNMLYS 440
I Y + +DA ++ + + K N Y
Sbjct: 694 AIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYC 753
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
L + N A + EM++ GL PN+ Y ++ L S A+ L
Sbjct: 754 TLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRL 806
>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 84/199 (42%), Gaps = 8/199 (4%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVE----MRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
+ LI C+ G DL + M+ G P +TYN ++ LC++G +A +LL
Sbjct: 334 FTTLIDGQCKH----GKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLL 389
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
EM+G PD IT+ + C+ G D A ++MV+ G++ A I G
Sbjct: 390 NEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRD 449
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
R DA + + + Y+++ K + M +L EM ++G P V Y
Sbjct: 450 GRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTY 509
Query: 475 RRVLKHLHTSHQEHMAKCL 493
++ Q AK L
Sbjct: 510 NALMNGFCKQGQMKNAKML 528
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 5/144 (3%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
L+ F +G A+ V + R+ V +N LI CR + + L M
Sbjct: 232 LMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVLKSVMESER 291
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
P TY+ ++ LCK + +A L +EM P+ +T+ I C+ GK D+A
Sbjct: 292 ISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLAL 351
Query: 387 NFFNQMVKRGLQPRLATHAAFIKG 410
F M RG++P L T+ A I G
Sbjct: 352 RNFEIMKDRGIRPDLITYNALING 375
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 77/175 (44%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +NIL+ C+ D R + E+ + G P +++N ++ C++ + L
Sbjct: 226 VYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVLKS 285
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M PD TY I C+ + + A F++M + GL P T I G
Sbjct: 286 VMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHG 345
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
+ + A + + D+ + Y+ L + ++ + A+ +L+EM+ NG +P+
Sbjct: 346 KIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPD 400
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 82/193 (42%), Gaps = 3/193 (1%)
Query: 289 IKKTER---KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNG 345
+ ++ER V Y+ LI +C+ + L EM ++G P +T+ ++ CK+G
Sbjct: 286 VMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHG 345
Query: 346 QDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
+ A E M R PD ITY I CR G A N+M+ G +P T
Sbjct: 346 KIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFT 405
Query: 406 AFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKN 465
+ G + A + ++ ++ ++ L S ++ A+ +L +M+
Sbjct: 406 TLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSA 465
Query: 466 GLRPNVSVYRRVL 478
G +P+ Y V+
Sbjct: 466 GHKPDDPTYTMVI 478
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ++I C++ D K LL EM++ G P +TYN ++ CK GQ +A LL ML
Sbjct: 474 YTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAML 533
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
P+ IT+ I + C+ G V F FN ++GL A++ A +
Sbjct: 534 NMEVVPNDITFNILLDGHCKHGS-SVDFKIFNG--EKGLVSDYASYTALV 580
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 65/165 (39%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
+ +E+ G P +N ++ CK G +A + +E+ R P +++ I
Sbjct: 212 EFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGY 271
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
CR + F + M + P + T++A I G R E+A + +
Sbjct: 272 CRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNG 331
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ ++ L K+ +A M G+RP++ Y ++ L
Sbjct: 332 VTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGL 376
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 58/137 (42%), Gaps = 1/137 (0%)
Query: 335 NYVLGVLCKNGQDADAC-ELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
+Y+L + K Q C E E+L P+ + I + C++G A F+++
Sbjct: 194 DYLLRRVMKLNQQPGHCWEFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEIS 253
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPV 453
+RGL+P + + I GY E+ + + + S YS L + K +
Sbjct: 254 RRGLRPSVVSFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVE 313
Query: 454 MAKNVLSEMMKNGLRPN 470
A + EM + GL PN
Sbjct: 314 EANGLFDEMCEMGLVPN 330
>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 833
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 83/185 (44%), Gaps = 8/185 (4%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEM--RQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
YN ++K +C + DLL M + GC P +TYN V+ L + G+ + AC L E
Sbjct: 193 YNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHE 252
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
M+ + PD +TY I C+ D A QM+ G QP T+ I GY I +
Sbjct: 253 MMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQ 312
Query: 417 Y-EDAYKYVVLSADKYKSSSNMLYSLLASL--HDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
+ E A + +++ + S ++SL H K+ A M G +PN+
Sbjct: 313 WKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKE---AAEFFDSMAAKGHKPNLVT 369
Query: 474 YRRVL 478
Y +L
Sbjct: 370 YSVLL 374
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 83/184 (45%), Gaps = 1/184 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGC-EPITLTYNYVLGVLCKNGQDADACELLEEM 357
Y+ LI+ C + ++L+ EM G P + +N ++ LCK G+ +A ++ + +
Sbjct: 475 YHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFV 534
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
+ PD IT+ I VGK + AF + M+ G++P + ++ I GY R
Sbjct: 535 IHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRI 594
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+D K + + Y ++ + V AK + EM+++G ++S +
Sbjct: 595 DDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGII 654
Query: 478 LKHL 481
L L
Sbjct: 655 LGGL 658
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 63/117 (53%), Gaps = 8/117 (6%)
Query: 300 NILIKEMCRRCDFKGPRD------LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACEL 353
++++ + +C + R LL M ++G EP T++YN V+ LC++ + A +L
Sbjct: 153 DVIVASILLKCLYHAKRSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDL 212
Query: 354 LEEMLGR--NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
L M+ + C P+ +TY I R G+ A N F++M+++G+ P + T+ + I
Sbjct: 213 LHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSII 269
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 54/117 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ ++N +I +C+ D+ + +G P +T+N ++ G+ A +L+
Sbjct: 508 IVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLD 567
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
M+ PD ++Y I CR G+ D F +M+ +G++P T+ + G F
Sbjct: 568 AMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLF 624
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 85/220 (38%), Gaps = 38/220 (17%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I +K + EM G P +T N + LCK+G+ +A E + M
Sbjct: 300 YNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMA 359
Query: 359 GRNCHPDAITYEIF------------------------IVYSCRV-----------GKFD 383
+ P+ +TY + IV RV G D
Sbjct: 360 AKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMD 419
Query: 384 VAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY-KYVVLSADKYKSSSNMLYSLL 442
F QM ++G+ P T+ I + R DA K+ + A K + +SL+
Sbjct: 420 ETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLI 479
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGL-RPNVSVYRRVLKHL 481
+ N V AK ++SEMM G+ RPN+ + ++ L
Sbjct: 480 QGFC-MHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSL 518
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 54/116 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y +I +C+ +L +M G +P +TYN ++ +GQ + +
Sbjct: 262 VVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFR 321
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
EM + P+ +T ++ C+ GK A FF+ M +G +P L T++ + GY
Sbjct: 322 EMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGY 377
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 15/250 (6%)
Query: 244 ALTKKGIWRVVEVLN------QVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKK-----T 292
+L K+G RVVE + +G V +LI+ + ++G E A V+
Sbjct: 517 SLCKEG--RVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGI 574
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E V YN LI CR L EM G +P T+TY +L L +G+ A +
Sbjct: 575 EPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKK 634
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+ EM+ D T I + CR D A F ++ ++ +A I +
Sbjct: 635 MCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMY 694
Query: 413 IFYRYEDAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
+ E+A + + +SA +++ ++ +L K + A N+ S M K+G P+
Sbjct: 695 KVRKREEAKELFDSISATGLVPNASTYGVMIKNLL-KEGSVEEADNMFSLMEKSGCAPSS 753
Query: 472 SVYRRVLKHL 481
+ +++ L
Sbjct: 754 RLLNYIIRVL 763
>gi|356564752|ref|XP_003550612.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Glycine max]
Length = 544
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 1/114 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM- 357
+NILI+ +C D +LL +M GC P +TYN +L LC+ Q A +LLEE+
Sbjct: 216 FNILIRGLCTAGDVDEAFELLGDMGSFGCSPDIVTYNILLHGLCRIDQVDRARDLLEEVC 275
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
L P+ ++Y I CR+ K D A + F +MV+ G +P + T +A + G+
Sbjct: 276 LKCEFAPNVVSYTTVISGYCRLSKMDEASSLFYEMVRSGTKPNVFTFSALVDGF 329
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 61/142 (42%), Gaps = 1/142 (0%)
Query: 331 TLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN 390
T+N ++ LC G +A ELL +M C PD +TY I + CR+ + D A +
Sbjct: 213 AFTFNILIRGLCTAGDVDEAFELLGDMGSFGCSPDIVTYNILLHGLCRIDQVDRARDLLE 272
Query: 391 QM-VKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKN 449
++ +K P + ++ I GY + ++A + +S L K
Sbjct: 273 EVCLKCEFAPNVVSYTTVISGYCRLSKMDEASSLFYEMVRSGTKPNVFTFSALVDGFVKA 332
Query: 450 NNPVMAKNVLSEMMKNGLRPNV 471
+ A + +++ +G PNV
Sbjct: 333 GDMASALGMHKKILFHGCAPNV 354
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 48/113 (42%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y +I CR L EM + G +P T++ ++ K G A A + +
Sbjct: 284 VVSYTTVISGYCRLSKMDEASSLFYEMVRSGTKPNVFTFSALVDGFVKAGDMASALGMHK 343
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
++L C P+ IT I CR G + + + +M R + L T++ I
Sbjct: 344 KILFHGCAPNVITLTSLINGYCRAGWVNHGLDLWREMNARNIPANLYTYSVLI 396
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 82/218 (37%), Gaps = 9/218 (4%)
Query: 253 VVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDF 312
VV + G C +S + +F YEM + T+ V ++ L+ + D
Sbjct: 284 VVSYTTVISGYCRLSKMDEASSLF-----YEMVR---SGTKPNVFTFSALVDGFVKAGDM 335
Query: 313 KGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIF 372
+ ++ GC P +T ++ C+ G +L EM RN + TY +
Sbjct: 336 ASALGMHKKILFHGCAPNVITLTSLINGYCRAGWVNHGLDLWREMNARNIPANLYTYSVL 395
Query: 373 IVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYK 432
I C+ + A N + + + P + I GY ++A V +K K
Sbjct: 396 ISALCKSNRLQEARNLLRILKQSDIVPLAFVYNPVIDGYCKSGNIDEANAIVAEMEEKCK 455
Query: 433 SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
+ +++L H A + +M+ +G P+
Sbjct: 456 -PDKLTFTILIIGHCMKGRTPEAIGIFYKMLASGCTPD 492
>gi|226530647|ref|NP_001146846.1| peptidase S8 and S53, subtilisin, kexin, sedolisin [Zea mays]
gi|194699540|gb|ACF83854.1| unknown [Zea mays]
gi|195604202|gb|ACG23931.1| peptidase S8 and S53, subtilisin, kexin, sedolisin [Zea mays]
gi|414886441|tpg|DAA62455.1| TPA: peptidase S8 and S53, subtilisin, kexin, sedolisin [Zea mays]
Length = 401
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 63/124 (50%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ++ +CR+ + LL MR G P + YN V+ +C+ G+ DAC+++ +M+
Sbjct: 225 YTTVLNALCRKKQLREAYRLLCLMRGRGVSPDIVHYNTVIVGMCREGRPLDACKVVVDMM 284
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C P+A+TY + C G +D A + MV +GL P + + I+G + E
Sbjct: 285 DNGCTPNAVTYGTVVNGLCVSGLYDKAEAYLVDMVGKGLVPHFSVFHSVIRGCCTVGKVE 344
Query: 419 DAYK 422
+A +
Sbjct: 345 EAAQ 348
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 55/127 (43%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y IL + +CR+ + LL EM G L Y VL LC+ Q +A LL M
Sbjct: 190 YRILTQSLCRKAQVRTAATLLDEMLHRGIPADPLAYTTVLNALCRKKQLREAYRLLCLMR 249
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
GR PD + Y IV CR G+ A M+ G P T+ + G + Y+
Sbjct: 250 GRGVSPDIVHYNTVIVGMCREGRPLDACKVVVDMMDNGCTPNAVTYGTVVNGLCVSGLYD 309
Query: 419 DAYKYVV 425
A Y+V
Sbjct: 310 KAEAYLV 316
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 90/219 (41%), Gaps = 12/219 (5%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
++ +N+LI R L +R + P TY + LC+ Q A LL+
Sbjct: 152 LASHNLLIDAAARSGHVAVSLSLFHRLRSLHVSPDADTYRILTQSLCRKAQVRTAATLLD 211
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EML R D + Y + CR + A+ M RG+ P + + I G
Sbjct: 212 EMLHRGIPADPLAYTTVLNALCRKKQLREAYRLLCLMRGRGVSPDIVHYNTVIVGMCREG 271
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSL------LASLHDKNNNPVMAKNVLSEMMKNGLRP 469
R DA K VV D + + + Y ++ L+DK A+ L +M+ GL P
Sbjct: 272 RPLDACKVVVDMMDNGCTPNAVTYGTVVNGLCVSGLYDK------AEAYLVDMVGKGLVP 325
Query: 470 NVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSVEA 508
+ SV+ V++ T + A + SR L + VE+
Sbjct: 326 HFSVFHSVIRGCCTVGKVEEAAQIMSRMLDLGVVPHVES 364
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 1/154 (0%)
Query: 329 PITL-TYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
P+ L ++N ++ ++G A + L + + PDA TY I CR + A
Sbjct: 149 PLVLASHNLLIDAAARSGHVAVSLSLFHRLRSLHVSPDADTYRILTQSLCRKAQVRTAAT 208
Query: 388 FFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHD 447
++M+ RG+ + + + +AY+ + L + S + Y+ +
Sbjct: 209 LLDEMLHRGIPADPLAYTTVLNALCRKKQLREAYRLLCLMRGRGVSPDIVHYNTVIVGMC 268
Query: 448 KNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ P+ A V+ +MM NG PN Y V+ L
Sbjct: 269 REGRPLDACKVVVDMMDNGCTPNAVTYGTVVNGL 302
>gi|326504498|dbj|BAJ91081.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 793
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 8/161 (4%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
+L EM GC P +TYN ++ K+G +A EL EEM + PD ITY I
Sbjct: 306 VLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVITYTTLISGLD 365
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS-- 435
R GK D A +++M++ G +P L T+ A IK + + ++ + ++ D +S+
Sbjct: 366 RAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPE----MMAVFDDLRSAGFV 421
Query: 436 --NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ ++ L ++ +N V EM K+G P Y
Sbjct: 422 PDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTY 462
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 4/161 (2%)
Query: 263 SCLVSGVRALIEMFSVLGLY-EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
+ L+SG+ ++ + +G Y EM + K + YN LIK R F + +
Sbjct: 358 TTLISGLDRAGKIDAAIGTYDEMLRNGCKPN---LCTYNALIKLHGVRGKFPEMMAVFDD 414
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
+R G P +T+N +L V +NG D++ + +EM P+ TY I R G
Sbjct: 415 LRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGL 474
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
FD + + +M++ G+ P ++T+ A + R+E A K
Sbjct: 475 FDQSMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEK 515
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 57/126 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ R D + ++L E++ G P +YN ++ + GQ +A L EM
Sbjct: 637 YNSLMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEASRLFSEMK 696
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD +TY IF+ F+ A + MV RG +P T+ + ++ Y +
Sbjct: 697 SSGLIPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTRGCKPNERTYNSILQEYCRHGKIA 756
Query: 419 DAYKYV 424
DA ++
Sbjct: 757 DAKSFL 762
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 99/244 (40%), Gaps = 23/244 (9%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTE-----RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
+L++++ +++ A V+K+ E V YN LI + K +L EM
Sbjct: 289 SLLDVYGKARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVK 348
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G +P +TY ++ L + G+ A +EML C P+ TY I GKF
Sbjct: 349 GIQPDVITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEM 408
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYR----YEDAYKYVVLSADKYKSSSNMLYSL 441
F+ + G P + T + +F + E + + + Y + SL
Sbjct: 409 MAVFDDLRSAGFVPDVVTWNTLLA---VFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSL 465
Query: 442 LAS-----LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSR 496
++S L D+ + + M++ G+ P++S Y VL L + A+ L +
Sbjct: 466 ISSYSRCGLFDQ------SMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAE 519
Query: 497 YSSL 500
+L
Sbjct: 520 MENL 523
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Query: 331 TLTYNYVLGVLCKNGQDADACE-LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFF 389
T TYN ++ + + G D + CE +L E+ PD +Y I R G+ A F
Sbjct: 634 TATYNSLMHMYSRLG-DCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEASRLF 692
Query: 390 NQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV 424
++M GL P + T+ F+K Y +E+A V
Sbjct: 693 SEMKSSGLIPDIVTYNIFVKSYVANSMFEEAIDLV 727
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 78/226 (34%), Gaps = 37/226 (16%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL----------- 341
E S Y L+ R F+ + M G +P +TYN VL V
Sbjct: 175 EPDASAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVV 234
Query: 342 ------------------------CKNGQ-DADACELLEEMLGRNCHPDAITYEIFIVYS 376
C+ G +A ++ +EM PD +T+ +
Sbjct: 235 ALVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVY 294
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
+ D A +M G P + T+ + I Y ++A + K
Sbjct: 295 GKARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDV 354
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLH 482
+ Y+ L S D+ A EM++NG +PN+ Y ++K LH
Sbjct: 355 ITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIK-LH 399
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 60/155 (38%), Gaps = 26/155 (16%)
Query: 231 KAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAK--YV 288
++ GF+P +++ L + V Q G VSGV EM K YV
Sbjct: 416 RSAGFVPDVVTWNTL--------LAVFGQNGLDSEVSGV-----------FKEMKKSGYV 456
Query: 289 IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA 348
++ Y LI R F ++ M + G P TYN VL L + G+
Sbjct: 457 PER-----DTYVSLISSYSRCGLFDQSMEIYKRMIEAGIYPDISTYNAVLSALARGGRWE 511
Query: 349 DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
A +L EM +C PD ++Y + K D
Sbjct: 512 QAEKLFAEMENLDCRPDELSYSSLLHAYANAKKLD 546
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 75/166 (45%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
EM C P TY V+ LCK DAC++ E+M+ + C PD ITY I +
Sbjct: 168 EMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKAS 227
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
K D A + M+ +G +P T+ + + G+ +A + + ++ +++
Sbjct: 228 KMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFT 287
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
L S + A VL+EM G P+V +Y ++ L ++ +
Sbjct: 288 SLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGR 333
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%)
Query: 286 KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNG 345
+ V K V Y +IK + +L E++ GC P + Y V+ L K G
Sbjct: 98 RAVTPKASLDVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAG 157
Query: 346 QDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
+ D + EEM G +C P TY + I C+ A F QMV++G P T+
Sbjct: 158 RIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYT 217
Query: 406 AFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKN 465
I G+ + ++A K + + K + + Y + K + AK V+++M +
Sbjct: 218 TLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRER 277
Query: 466 GLRPNVSVYRRVLKH 480
G P + ++ +L +
Sbjct: 278 GCEPGLFIFTSLLSY 292
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 80/191 (41%), Gaps = 1/191 (0%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K E Y ++ C+ ++++ +MR+ GCEP + +L G+ +
Sbjct: 242 KGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEE 301
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A ++L EM R C PD I Y I G+ A + F+ M+++G P T+ I+
Sbjct: 302 AYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQ 361
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
+ E A + + L A Y+ L + K A V M+ +G++P
Sbjct: 362 NFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKP 421
Query: 470 NVSVYRRVLKH 480
N + VL H
Sbjct: 422 NAVTF-NVLMH 431
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 84/185 (45%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
+ Y ++I +C+ + +M Q GC P T+TY ++ K + +A +LL+
Sbjct: 179 TTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDV 238
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
ML + P A+TY + C++ + A QM +RG +P L + + Y R
Sbjct: 239 MLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGR 298
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
E+AY+ + + + +LY+ L L A++V M++ G P+ Y
Sbjct: 299 AEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGT 358
Query: 477 VLKHL 481
++++
Sbjct: 359 IIQNF 363
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 70/180 (38%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI + R LL M G EP +TY ++ CK +A E++ +M
Sbjct: 216 YTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMR 275
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R C P + + Y G+ + A+ +M RG P + + + I F R
Sbjct: 276 ERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVP 335
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A +K + + Y + K N A +L M K+G+ P+ Y ++
Sbjct: 336 EARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLM 395
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 78/194 (40%), Gaps = 1/194 (0%)
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
R + M + GC P LTY ++ K G A E+LE M PD Y +
Sbjct: 338 RHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDG 397
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
++ + D AF +++MV G++P T + G F + + A+ +K +
Sbjct: 398 YVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPP 457
Query: 436 NML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLS 494
++ Y++L K A EM+ G+ P Y ++ L + + AK L
Sbjct: 458 TLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLV 517
Query: 495 SRYSSLSLGSSVEA 508
L + V+A
Sbjct: 518 EDMVKLGVNPDVQA 531
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 84/191 (43%), Gaps = 10/191 (5%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN-CHPDAITYEIFIVYSCRVG 380
M G +P +T+N ++ L K+G+ A L +EML + P ++Y I I + G
Sbjct: 414 MVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAG 473
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN---M 437
+ AF F +M+ RG+ P T+ + I R +A K V D K N
Sbjct: 474 RVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLV---EDMVKLGVNPDVQ 530
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRY 497
YS L + ++ A +V EMMK G PN Y+ + + + + A L +
Sbjct: 531 AYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGR---ALDLEAVK 587
Query: 498 SSLSLGSSVEA 508
S G ++EA
Sbjct: 588 QHFSQGVAMEA 598
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 8/159 (5%)
Query: 325 VGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
+GCEP ++YN V+ L + +A + M+ C PD I + I C+ G+ V
Sbjct: 1 MGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQV 60
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML--YSLL 442
NQ +KR +P + + + I GY + Y V K+S +++ +++
Sbjct: 61 GHKLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGYFRAVTP----KASLDVISYTTVI 115
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
L D A + E+ G PNV Y V+ L
Sbjct: 116 KGLADSKRID-EACELFEELKTAGCSPNVVAYTAVIDGL 153
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 82/185 (44%), Gaps = 3/185 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +I+ + + + ++L M + G P YN ++ K + A + + M+
Sbjct: 356 YGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMV 415
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV-KRGLQPRLATHAAFIKGYFIFYRY 417
P+A+T+ + + + GK D AF+ F +M+ K + P L ++ I G R
Sbjct: 416 ASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRV 475
Query: 418 EDAYKYVVLSADKYKSSSNMLY-SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
+A+ D+ Y SL+ SL P AK ++ +M+K G+ P+V Y
Sbjct: 476 SEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIP-EAKKLVEDMVKLGVNPDVQAYSA 534
Query: 477 VLKHL 481
++ L
Sbjct: 535 LITGL 539
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
EM G P TY ++ L K G+ +A +L+E+M+ +PD Y I
Sbjct: 484 EMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSS 543
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
D A++ F +M+KRG P T+ +G+
Sbjct: 544 MVDTAWDVFQEMMKRGCAPNEVTYKVLRRGF 574
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g31850, chloroplastic; AltName: Full=Protein PROTON
GRADIENT REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 137/329 (41%), Gaps = 41/329 (12%)
Query: 169 VLNSEKVSALCFLKYMREIM-PEFYKNSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVC 227
V N + A+CF M++++ P+F + V+ D Y+ + L + C
Sbjct: 654 VKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYN------C 707
Query: 228 LNEKAFGFLPVLISSKALTKKGIWRVVE-----VLNQV---GGSCLV------------S 267
++ A F LI S L + GI V V N + G S LV S
Sbjct: 708 ADQPANLFWEDLIGS-ILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVS 766
Query: 268 GVRALIEMFSV-LGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
G R L E F+ LG+ + K+ YN+LI + + +D+ ++++ G
Sbjct: 767 GARTLFEKFTKDLGV-----------QPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTG 815
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
C P TYN++L K+G+ + EL +EM C + IT+ I I + G D A
Sbjct: 816 CIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDAL 875
Query: 387 N-FFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASL 445
+ +++ M R P T+ I G R +A + D + +Y++L +
Sbjct: 876 DLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILING 935
Query: 446 HDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
K A + M+K G+RP++ Y
Sbjct: 936 FGKAGEADAACALFKRMVKEGVRPDLKTY 964
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 90/211 (42%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V + IL+ +C+ +F D L MR G P TYN ++ L + + DA EL
Sbjct: 363 VVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFG 422
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M P A TY +FI Y + G A F +M +G+ P + A +
Sbjct: 423 NMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAG 482
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R +A + D ++ Y+++ + K A +LSEMM+NG P+V V
Sbjct: 483 RDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVN 542
Query: 476 RVLKHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
++ L+ + + A + R + L +V
Sbjct: 543 SLINTLYKADRVDEAWKMFMRMKEMKLKPTV 573
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 63/135 (46%), Gaps = 1/135 (0%)
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
K + V YN L+ + + + +L M Q GC P T+T+N + LCKN + A
Sbjct: 568 KLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLA 627
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
++L +M+ C PD TY I + G+ A FF+QM K+ + P T + G
Sbjct: 628 LKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPG 686
Query: 411 YFIFYRYEDAYKYVV 425
EDAYK +
Sbjct: 687 VVKASLIEDAYKIIT 701
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 85/198 (42%), Gaps = 14/198 (7%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI + + + L M GC P YN ++ K G+ AC L + M+
Sbjct: 894 YGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMV 953
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD TY + + C VG+ D ++F ++ + GL P + + I G +R E
Sbjct: 954 KEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLE 1013
Query: 419 DAYKYV-------VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
+A ++ D Y +S +L +A + ++ A + +E+ + GL PNV
Sbjct: 1014 EALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEE------AGKIYNEIQRAGLEPNV 1067
Query: 472 SVYRRVLKHLHTSHQ-EH 488
+ +++ S + EH
Sbjct: 1068 FTFNALIRGYSLSGKPEH 1085
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 80/178 (44%)
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVY 375
+ + ++ +G P ++TYN ++ K G+ +A +LL EM+ C PD I I
Sbjct: 488 KQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINT 547
Query: 376 SCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS 435
+ + D A+ F +M + L+P + T+ + G + ++A + K +
Sbjct: 548 LYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPN 607
Query: 436 NMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
+ ++ L KN+ +A +L +MM G P+V Y ++ L + Q A C
Sbjct: 608 TITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCF 665
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 87/205 (42%), Gaps = 2/205 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ L+ + +R D LL EM +G +P T+ + VL + G+ +A E+L+ M
Sbjct: 226 YSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMD 285
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C PD +TY + I C K D A F +M +P T+ + F R
Sbjct: 286 DEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLD-RFSDNRDL 344
Query: 419 DAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
D+ K +K +++ +++L K N A + L M G+ PN+ Y +
Sbjct: 345 DSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTL 404
Query: 478 LKHLHTSHQEHMAKCLSSRYSSLSL 502
+ L H+ A L SL +
Sbjct: 405 ICGLLRVHRLDDALELFGNMESLGV 429
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 93/204 (45%), Gaps = 3/204 (1%)
Query: 281 LYEMAKYV-IKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE-MRQVGCEPITLTYNYVL 338
L+E+ K + + E +NI+I + + + DL + M P TY ++
Sbjct: 839 LFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLI 898
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
L K+G+ +A +L E ML C P+ Y I I + G+ D A F +MVK G++
Sbjct: 899 DGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVR 958
Query: 399 PRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNV 458
P L T++ + + R ++ Y + + + Y+L+ + K++ A +
Sbjct: 959 PDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVL 1018
Query: 459 LSEM-MKNGLRPNVSVYRRVLKHL 481
+EM G+ P++ Y ++ +L
Sbjct: 1019 FNEMKTSRGITPDLYTYNSLILNL 1042
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 78/171 (45%), Gaps = 2/171 (1%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M+ G P + N L L K G+D +A ++ + PD++TY + + +VG
Sbjct: 458 KMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVG 517
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSNMLY 439
+ D A ++M++ G +P + + I + R ++A+K ++ + K K +
Sbjct: 518 EIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYN 577
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
+LLA L KN A + M++ G PN + + L + + +A
Sbjct: 578 TLLAGLG-KNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLA 627
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 6/156 (3%)
Query: 272 LIEMFSVLGLYEMA----KYVIKKTER-KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
LI F G + A K ++K+ R + Y++L+ +C E+++ G
Sbjct: 932 LINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESG 991
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEM-LGRNCHPDAITYEIFIVYSCRVGKFDVA 385
P + YN ++ L K+ + +A L EM R PD TY I+ G + A
Sbjct: 992 LNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEA 1051
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
+N++ + GL+P + T A I+GY + + E AY
Sbjct: 1052 GKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAY 1087
>gi|357159149|ref|XP_003578355.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Brachypodium distachyon]
Length = 857
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 131/325 (40%), Gaps = 34/325 (10%)
Query: 147 TESKLLSMSVSLSNASVIEILRVLNSEKVSALCFLKYMREIMPEFYKNSDICSLVIDNCG 206
TE L S+ + ++L++L+ + AL F +++ P F + + +I G
Sbjct: 318 TEHVLDSLHCKIDAFQANQVLKLLHDHTM-ALGFFHWLKR-QPGFKHDGHTYTTMIGILG 375
Query: 207 RLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLV 266
+ + MR LL++ N + P +++ R++ + + L
Sbjct: 376 QARQFGIMRNLLHEMNRDRC---------KPTVVTYN--------RIIHAYGRA--NYLR 416
Query: 267 SGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
V+ EM E A Y E Y LI + + DL M++VG
Sbjct: 417 EAVKVFEEM-------EEAGY-----EPDRVTYCTLIDIHAKAGYLEVAMDLYGRMQEVG 464
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
P T TY+ ++ L K GQ A A +L EM+ C P+ +TY I I + +D
Sbjct: 465 LSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIIIALQAKARNYDNVV 524
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
+ M G +P T++ ++ + D + V + + + +Y LL L
Sbjct: 525 KLYRDMQVAGFRPDKITYSIVME-VLGHCGHLDEAEAVFIEMRRDWAPDEPVYGLLVDLW 583
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNV 471
K N A M+++GL+PNV
Sbjct: 584 GKAGNVDKALGWYHAMLQDGLQPNV 608
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 84/188 (44%), Gaps = 1/188 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +I + + F R+LL EM + C+P +TYN ++ + +A ++ EEM
Sbjct: 367 YTTMIGILGQARQFGIMRNLLHEMNRDRCKPTVVTYNRIIHAYGRANYLREAVKVFEEME 426
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD +TY I + G +VA + + +M + GL P T++A + +
Sbjct: 427 EAGYEPDRVTYCTLIDIHAKAGYLEVAMDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQLA 486
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
AYK + + + + Y+++ +L K N + +M G RP+ Y V+
Sbjct: 487 AAYKLFCEMIENGCTPNLVTYNIIIALQAKARNYDNVVKLYRDMQVAGFRPDKITYSIVM 546
Query: 479 KHL-HTSH 485
+ L H H
Sbjct: 547 EVLGHCGH 554
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 1/123 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNI+I + ++ L +M+ G P +TY+ V+ VL G +A + EM
Sbjct: 507 YNIIIALQAKARNYDNVVKLYRDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMR 566
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R+ PD Y + + + G D A +++ M++ GLQP + T + + + R++
Sbjct: 567 -RDWAPDEPVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQ 625
Query: 419 DAY 421
DAY
Sbjct: 626 DAY 628
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 66/166 (39%), Gaps = 20/166 (12%)
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
RQ G + TY ++G+L + Q LL EM C P +TY I R
Sbjct: 356 RQPGFKHDGHTYTTMIGILGQARQFGIMRNLLHEMNRDRCKPTVVTYNRIIHAYGRANYL 415
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIK-----GYF-----IFYRYEDAYKYVVLSADKYK 432
A F +M + G +P T+ I GY ++ R ++ V LS D +
Sbjct: 416 REAVKVFEEMEEAGYEPDRVTYCTLIDIHAKAGYLEVAMDLYGRMQE----VGLSPDTFT 471
Query: 433 SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
YS + + K A + EM++NG PN+ Y ++
Sbjct: 472 ------YSAMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIII 511
>gi|255660926|gb|ACU25632.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 484
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 63/133 (47%)
Query: 292 TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADAC 351
ER + Y+ L K + RR F + +M G EP T+N ++ +G+ A
Sbjct: 111 VERTIKSYDALFKVIMRRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAN 170
Query: 352 ELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
E+M R PD ITY I CRV K + A +F +M + ++P + T+ IKGY
Sbjct: 171 RFFEDMKSREISPDVITYNTMINGYCRVKKMEEAEKYFVEMKGKNIEPTVVTYTTLIKGY 230
Query: 412 FIFYRYEDAYKYV 424
+ +DA + V
Sbjct: 231 VSVDQVDDALRLV 243
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 70/164 (42%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L +M ++G E +Y+ + V+ + G+ A +ML P T+ + I
Sbjct: 102 LFQKMEELGVERTIKSYDALFKVIMRRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWGFF 161
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
GK + A FF M R + P + T+ I GY + E+A KY V K + +
Sbjct: 162 LSGKVETANRFFEDMKSREISPDVITYNTMINGYCRVKKMEEAEKYFVEMKGKNIEPTVV 221
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y+ L + + A ++ EM G++PN Y +L L
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGL 265
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 89/209 (42%), Gaps = 11/209 (5%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L EM I T+ S + LI C+ + D+L M ++ Y ++
Sbjct: 278 LKEMVDKYIAPTDN--SIFMRLISSHCKVGNLDAAADVLKAMIRLSVPTEAGHYGVLIEN 335
Query: 341 LCKNGQDADACELLEEMLGRNC--------HPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
CK GQ A +LL++++ ++ H + Y + Y C G+ A Q+
Sbjct: 336 YCKAGQYDQAVKLLDKLIEKDIIVRPQSTLHMEPSAYNPIVEYLCNNGQTSKAEALVRQL 395
Query: 393 VKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNP 452
+K G+Q A + I+G+ + A++ + + + S Y L + K + P
Sbjct: 396 MKLGVQDPTALN-TLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKKSEP 454
Query: 453 VMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
AK L M++N P+ S++R V++ L
Sbjct: 455 ADAKAALDSMIENDHLPDSSLFRSVMESL 483
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 76/178 (42%)
Query: 302 LIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRN 361
+I+ + R R +L++M + G E + ++ K G ++ +L ++M
Sbjct: 51 IIEILGRASKLNHARCILLDMPKKGLEWDEDMWVLMIDSYGKEGIVQESVKLFQKMEELG 110
Query: 362 CHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
+Y+ R G+F +A +FN+M+ G++P T I G+F+ + E A
Sbjct: 111 VERTIKSYDALFKVIMRRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAN 170
Query: 422 KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
++ + S + Y+ + + + + A+ EM + P V Y ++K
Sbjct: 171 RFFEDMKSREISPDVITYNTMINGYCRVKKMEEAEKYFVEMKGKNIEPTVVTYTTLIK 228
>gi|449456681|ref|XP_004146077.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Cucumis sativus]
Length = 527
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 56/102 (54%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN +I C+ D + ++ EM + GC+P ++N ++G LCK G+ A +LLE+M
Sbjct: 364 YNAIINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMP 423
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
R C PD ++Y I C + + A + ++M+ +G PR
Sbjct: 424 RRGCPPDVLSYRIIFDGLCEMMQLKEATSILDEMIFKGYVPR 465
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 58/114 (50%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
+ Y+ LI + + + D+L EM + GC+P T+TYN ++ CK A +++E
Sbjct: 327 AVYSTLISALFKHGRKEEVSDILREMGENGCKPDTVTYNAIINGHCKENDLESAHRVMDE 386
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
M+ + C PD ++ I + C+ GK D A + M +RG P + ++ G
Sbjct: 387 MVEKGCKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRRGCPPDVLSYRIIFDG 440
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 82/184 (44%), Gaps = 1/184 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+NILI C D + EM++ G +P +T+ ++ L N + +A L E+M+
Sbjct: 223 FNILIHAACLCGDLDAVWGVFDEMQKRGVKPNVVTFGTLIYGLSLNSKLKEALRLKEDMV 282
Query: 359 G-RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
P+A Y I C VG+ + AF +MV ++ A ++ I F R
Sbjct: 283 KVYMIKPNASIYTTLIKGFCGVGELNFAFKLKEEMVTSNVKLVSAVYSTLISALFKHGRK 342
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
E+ + + + Y+ + + H K N+ A V+ EM++ G +P+V + +
Sbjct: 343 EEVSDILREMGENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTI 402
Query: 478 LKHL 481
+ L
Sbjct: 403 IGWL 406
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 12/169 (7%)
Query: 249 GIWRVVEVL-------NQVGGSCLVSGVRALIEMFSVLGLYE-MAK-YVIKKTERKVSYY 299
+W V + + N V L+ G+ ++ L L E M K Y+IK S Y
Sbjct: 238 AVWGVFDEMQKRGVKPNVVTFGTLIYGLSLNSKLKEALRLKEDMVKVYMIKPN---ASIY 294
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
LIK C + L EM + ++ Y+ ++ L K+G+ + ++L EM
Sbjct: 295 TTLIKGFCGVGELNFAFKLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDILREMGE 354
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
C PD +TY I C+ + A ++MV++G +P + + I
Sbjct: 355 NGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTII 403
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 76/188 (40%), Gaps = 37/188 (19%)
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
C+ + N +L L KN Q ++ + + PDA T+ I I +C G D +
Sbjct: 182 CKRTVKSVNSLLAALLKNRQLEKMTQVFVD-ISNYGSPDACTFNILIHAACLCGDLDAVW 240
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK-----------------YVVLS-- 427
F++M KRG++P + T I G + + ++A + Y L
Sbjct: 241 GVFDEMQKRGVKPNVVTFGTLIYGLSLNSKLKEALRLKEDMVKVYMIKPNASIYTTLIKG 300
Query: 428 ---------ADKYKS---SSNM-----LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
A K K +SN+ +YS L S K+ ++L EM +NG +P+
Sbjct: 301 FCGVGELNFAFKLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDILREMGENGCKPD 360
Query: 471 VSVYRRVL 478
Y ++
Sbjct: 361 TVTYNAII 368
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
M + V K + V +N +I +C+ DLL +M + GC P L+Y + LC+
Sbjct: 384 MDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRRGCPPDVLSYRIIFDGLCE 443
Query: 344 NGQDADACELLEEMLGRNCHP 364
Q +A +L+EM+ + P
Sbjct: 444 MMQLKEATSILDEMIFKGYVP 464
>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
Length = 795
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 8/161 (4%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
+L M GC P +TYN ++ K+G +A EL +EM R PD +TY I
Sbjct: 312 VLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLD 371
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN- 436
RVGK D A +++MV+ G P L T+ A IK + + ++ + ++ D +S+
Sbjct: 372 RVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTE----MMAVFDDLRSAGYV 427
Query: 437 ---MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ ++ L S+ +N V EM K G P Y
Sbjct: 428 PDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTY 468
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 2/180 (1%)
Query: 263 SCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEM 322
+ L+SG+ + ++ + L Y ++ V + YN LIK R F + ++
Sbjct: 364 TTLISGLDRVGKIDAALATY--SEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDL 421
Query: 323 RQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKF 382
R G P +T+N +L V +NG D++ + +EM P+ TY I R G F
Sbjct: 422 RSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLF 481
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
D A + +M++ G+ P ++T+ A + R+E A K D+ + YS L
Sbjct: 482 DQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSL 541
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 53/118 (44%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
ER YN LI RR + + EM+ G EP +T+N +L V K + +A
Sbjct: 252 ERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYGKARKHEEAIG 311
Query: 353 LLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
+L+ M C P +TY I + G + A +M RG++P + T+ I G
Sbjct: 312 VLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISG 369
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 91/223 (40%), Gaps = 7/223 (3%)
Query: 266 VSGVRALIEMFSVLGLYEMAKYVIKK-----TERKVSYYNILIKEMCR-RCDFKGPRDLL 319
S AL+ FS G + A V ++ + + YN++ + +K L+
Sbjct: 184 ASAYTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMSVPWKEVVALV 243
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
M++ G E TYN ++ + G +A ++ +EM PD +T+ + +
Sbjct: 244 DSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYGKA 303
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLY 439
K + A +M G P + T+ + I Y E+A + + + Y
Sbjct: 304 RKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTY 363
Query: 440 SLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLH 482
+ L S D+ A SEM++NG PN+ Y ++K LH
Sbjct: 364 TTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIK-LH 405
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 63/151 (41%), Gaps = 8/151 (5%)
Query: 269 VRALIEMFSVLGLYEMAKYVIK--------KTERKVSYYNILIKEMCRRCDFKGPRDLLV 320
+ L M S+ G +M K V + + YN L+ R D + +L
Sbjct: 605 INVLNAMVSIYGKNKMVKKVEEVLSLMMENSINHSAATYNSLMHMYSRLGDCEKCESILT 664
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
E++ G P +YN V+ + GQ +A L EM PD +TY IFI
Sbjct: 665 EIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANI 724
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
F+ A + +V +G +P T + ++GY
Sbjct: 725 MFEEAIDLVRYLVTQGCRPNERTFNSILQGY 755
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 22/153 (14%)
Query: 231 KAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIK 290
++ G++P +++ L + V Q G VSGV EM + A Y+ +
Sbjct: 422 RSAGYVPDVVTWNTL--------LSVFGQNGLDSEVSGV--FKEM-------KKAGYIPE 464
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
+ Y LI R F ++ M + G P TYN VL L + G+ A
Sbjct: 465 R-----DTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQA 519
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFD 383
+L EM+ R+C PD ++Y + K D
Sbjct: 520 EKLFAEMVDRDCKPDELSYSSLLHAYANAKKLD 552
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 56/152 (36%), Gaps = 18/152 (11%)
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
V + G A+A +LE PDA Y + R G+F A F +MV G+QP
Sbjct: 162 VFARAGCLAEASAILEAAPA----PDASAYTALVSAFSRAGRFRDAVAVFQRMVDGGVQP 217
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSS----NMLYSLLASLHDKNNNPVMA 455
L T+ Y + +K VV D K Y+ L S + A
Sbjct: 218 ALVTYNVVFHAY---SKMSVPWKEVVALVDSMKEDGIERDRYTYNTLISCCRRRGLHREA 274
Query: 456 KNVLSEMMKNGLRPN-------VSVYRRVLKH 480
V EM G P+ + VY + KH
Sbjct: 275 AQVFDEMKAAGFEPDKVTFNSLLDVYGKARKH 306
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 5/129 (3%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTE----RKVSY-YNILIKEMCRRCDFKGPRDLLVEMRQV 325
+L+ M+S LG E + ++ + + R Y YN +I R+ K L EM+
Sbjct: 645 SLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCS 704
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G +P +TYN + N +A +L+ ++ + C P+ T+ + R G+ A
Sbjct: 705 GVKPDIVTYNIFIKSYVANIMFEEAIDLVRYLVTQGCRPNERTFNSILQGYSRHGRMVEA 764
Query: 386 FNFFNQMVK 394
+F + + K
Sbjct: 765 KSFLSNLPK 773
>gi|255661016|gb|ACU25677.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 367
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 90/184 (48%), Gaps = 3/184 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI + F+ +L EM P +TY+ ++ LCK + +A +L++EML
Sbjct: 167 YNALINGLVGASKFEDAIRVLREMGTXHFSPTVVTYSXJINGLCKGERFGEAYDLVKEML 226
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ +P ITY + I C K D A +NQ++ +G +P + H I G + +
Sbjct: 227 DKGLNPSVITYSLLIKGLCLDRKVDKALQLWNQVISKGFKPDVQMHNIMIHGLCSVGKMQ 286
Query: 419 DAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
A + +++ + N++ ++ L K+ + A + + +++NGL+P++ Y
Sbjct: 287 LALSLYYM--NRWDCAPNLVTHNTLMEGFYKDGDVRNALVIWARILRNGLQPDIISYNIT 344
Query: 478 LKHL 481
LK L
Sbjct: 345 LKGL 348
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%)
Query: 282 YEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+E+ + + ++ R VS +NI+ + + + M++ G ++TY ++
Sbjct: 45 FELWELMGREGSRSVSSFNIMXRGLFBNGKVDEVISIWELMKESGYVEDSITYGILVHGF 104
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
CKNG + +LE + DA Y I C+ K D A + N M+K G +P
Sbjct: 105 CKNGYLNKSIHVLEIAERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKNGCKPNA 164
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
+ A I G ++EDA + + + S + + YS J + K A +++ E
Sbjct: 165 HVYNALINGLVGASKFEDAIRVLREMGTXHFSPTVVTYSXJINGLCKGERFGEAYDLVKE 224
Query: 462 MMKNGLRPNVSVYRRVLKHL 481
M+ GL P+V Y ++K L
Sbjct: 225 MLDKGLNPSVITYSLLIKGL 244
>gi|297733647|emb|CBI14894.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 82/185 (44%), Gaps = 13/185 (7%)
Query: 228 LNEKAFGFLPVLISSKALTKK---GIWR-----VVEVLNQVGGSCLVSGVRALIEMFSVL 279
L K G P S AL G W E + + G + AL++ F
Sbjct: 443 LRMKKVGIKPTSHSYTALIHAYSVGGWHEKAYTAFENMKREGIKPSIETYTALLDAFRRA 502
Query: 280 G----LYEMAKYVI-KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
G L ++ K ++ K E +NIL+ ++ + RD++ E ++G +P +TY
Sbjct: 503 GDTQTLMKIWKLMLSDKIEGTRVTFNILLDGFAKQGHYMEARDVIFEFGKIGFQPTVMTY 562
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N ++ + GQ + +LL+EM N PD+ITY I RV F AF + QMVK
Sbjct: 563 NMLMNAYARGGQHSRLPQLLKEMTSLNLKPDSITYSTMIYAYVRVRDFKRAFFYHKQMVK 622
Query: 395 RGLQP 399
G P
Sbjct: 623 SGQVP 627
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 95/234 (40%), Gaps = 11/234 (4%)
Query: 194 NSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRV 253
NS I L +CGR DD ++ ++ + + + ++ + K W
Sbjct: 246 NSAISGL--SSCGRYDD---AWKVYDEMETNNIRPDHVTCSIMITVMRKDGHSAKDAWEF 300
Query: 254 VEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCR 308
+ +N+ G + + ALI+ F GL A + + E+K YN L+ +
Sbjct: 301 FQRMNRKGVKWSLEVLGALIKSFCDEGLKNEALIIQSEMEKKGISSNAIVYNTLMDAYSK 360
Query: 309 RCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAIT 368
+ L EM+ G P + TYN ++ + Q LL EM P+ +
Sbjct: 361 SNRVEEAEGLFGEMKAKGVMPTSATYNILMDAYSRRMQPEIIENLLLEMQDMGLEPNVKS 420
Query: 369 YEIFIVYSCRVGKF-DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
Y I R K D+A + F +M K G++P ++ A I Y + +E AY
Sbjct: 421 YTCLISAYGRQKKMSDMAADAFLRMKKVGIKPTSHSYTALIHAYSVGGWHEKAY 474
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 1/142 (0%)
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK-FDVAFNFFNQM 392
YN + L G+ DA ++ +EM N PD +T I I + G A+ FF +M
Sbjct: 245 YNSAISGLSSCGRYDDAWKVYDEMETNNIRPDHVTCSIMITVMRKDGHSAKDAWEFFQRM 304
Query: 393 VKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNP 452
++G++ L A IK + +A K SS+ ++Y+ L + K+N
Sbjct: 305 NRKGVKWSLEVLGALIKSFCDEGLKNEALIIQSEMEKKGISSNAIVYNTLMDAYSKSNRV 364
Query: 453 VMAKNVLSEMMKNGLRPNVSVY 474
A+ + EM G+ P + Y
Sbjct: 365 EEAEGLFGEMKAKGVMPTSATY 386
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 66/172 (38%), Gaps = 5/172 (2%)
Query: 257 LNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCD 311
+ +VG ALI +SV G +E A + +R+ + Y L+ R D
Sbjct: 445 MKKVGIKPTSHSYTALIHAYSVGGWHEKAYTAFENMKREGIKPSIETYTALLDAFRRAGD 504
Query: 312 FKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEI 371
+ + M E +T+N +L K G +A +++ E P +TY +
Sbjct: 505 TQTLMKIWKLMLSDKIEGTRVTFNILLDGFAKQGHYMEARDVIFEFGKIGFQPTVMTYNM 564
Query: 372 FIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY 423
+ R G+ +M L+P T++ I Y ++ A+ Y
Sbjct: 565 LMNAYARGGQHSRLPQLLKEMTSLNLKPDSITYSTMIYAYVRVRDFKRAFFY 616
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 108/251 (43%), Gaps = 9/251 (3%)
Query: 244 ALTKKGIW-RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNIL 302
+TK+GI VV + G CLV V+ ++F + V V YNI+
Sbjct: 245 VMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAM--------VQMGVNPNVYSYNIM 296
Query: 303 IKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNC 362
I +C+ +LL EM P T+TYN ++ LCK+G+ A L+ EM R
Sbjct: 297 INGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQ 356
Query: 363 HPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYK 422
D +TY + C+ D A F +M +RG+QP + T+ A I G R ++A +
Sbjct: 357 PADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQE 416
Query: 423 YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLH 482
K Y+++ S K A + S+M NG PN + +++ L
Sbjct: 417 LFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLF 476
Query: 483 TSHQEHMAKCL 493
+ A+ L
Sbjct: 477 EKDENDKAEKL 487
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 85/196 (43%), Gaps = 8/196 (4%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
+ T V YN +I +C+ DL EM G P +TY ++ C GQ
Sbjct: 144 RSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMG 203
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A LL+EM+ +N +P Y I I C+ G A N M K G++P + T++ +
Sbjct: 204 AFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMD 263
Query: 410 GYFIFYRYEDA----YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKN 465
GY + ++A + V + + S N++ + L + A N+L EM+
Sbjct: 264 GYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDE----AMNLLREMLHK 319
Query: 466 GLRPNVSVYRRVLKHL 481
+ P+ Y ++ L
Sbjct: 320 NMVPDTVTYNSLIDGL 335
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 35/180 (19%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y L+ +C+ + + LL + P + YN ++ LCK+ +A +L EM
Sbjct: 118 YGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMD 177
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R PDAITY I C +G+ AF+ ++M+ + + P G +I
Sbjct: 178 ARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINP----------GVYI----- 222
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
Y++L + K N AKN+L+ M K G++P V Y ++
Sbjct: 223 --------------------YNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLM 262
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 72/183 (39%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI C G LL EM P YN ++ LCK G +A LL M
Sbjct: 188 YTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMT 247
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P +TY + C VG+ A F+ MV+ G+ P + ++ I G R +
Sbjct: 248 KEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVD 307
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + K + Y+ L K+ A N+++EM G +V Y +L
Sbjct: 308 EAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLL 367
Query: 479 KHL 481
L
Sbjct: 368 DAL 370
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 4/113 (3%)
Query: 289 IKKTERKVS----YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKN 344
+K ER + Y LI +C+ K ++L + GC TY ++ LCK
Sbjct: 384 MKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKE 443
Query: 345 GQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGL 397
G +A + +M C P+A+T+EI I + D A ++M+ +GL
Sbjct: 444 GMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 496
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 67/158 (42%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M G +T N ++ C GQ A + +L ++L PD IT + C G
Sbjct: 35 QMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKG 94
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+ + +F +++V +G Q ++ + G A K + + D+ + ++Y+
Sbjct: 95 EVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYN 154
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ K+ A ++ SEM G+ P+ Y ++
Sbjct: 155 TIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLI 192
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P + +N +LG L K Q A L ++M + + +T I I C +G+ +F+
Sbjct: 8 PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67
Query: 389 FNQMVKRGLQPRLATHAAFIKG 410
+++K G QP T +KG
Sbjct: 68 LGKILKLGYQPDTITLNTLMKG 89
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 99/229 (43%), Gaps = 18/229 (7%)
Query: 268 GVRALIEMFSVL---GLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQ 324
G + E+FS+L GL+ K N L+ + + + K + M
Sbjct: 142 GFGVVFELFSLLANKGLFPSLKTC-----------NFLLSSLVKANEVKMSYQVFDIMCH 190
Query: 325 VGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
G P ++ ++ C G+ DA EL +M P+ +TY I C+ G+ D
Sbjct: 191 CGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDE 250
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLAS 444
AF F +M K ++P L T+ I G R+++A + +D+ + +N++Y+ L
Sbjct: 251 AFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLID 310
Query: 445 LHDKNNNPVMAKNVLSEMMKNGLRPNV----SVYRRVLKHLHTSHQEHM 489
+ + N A + +M+ NG+ PN S+ + K H EH+
Sbjct: 311 GYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHL 359
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 62/125 (49%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
LL EMR+ G P + Y ++G CK GQ +L+EM N HP+ ITY I I C
Sbjct: 639 LLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHC 698
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
++G A N+M ++G+ P T+ A G+ + E+A K L + S ++
Sbjct: 699 KLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDI 758
Query: 438 LYSLL 442
Y+ L
Sbjct: 759 TYTTL 763
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 80/179 (44%)
Query: 301 ILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGR 360
+L+ +C+ +L + + G T+T N ++ LC+ G +A +LL+EML R
Sbjct: 412 LLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLER 471
Query: 361 NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
D+I+Y I+ C+ GK + F +MV+RG+QP + T+ + G + E+A
Sbjct: 472 GLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEA 531
Query: 421 YKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
Y ++ + K N + + EM+ + N VY +++
Sbjct: 532 GGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIR 590
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 86/202 (42%), Gaps = 8/202 (3%)
Query: 283 EMAKYVIKKTERKVSY----YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
E AK + + ER + YN LI C+ + L EM + G +P TYN +L
Sbjct: 460 EAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLL 519
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
LC G+ +A L E PDA TY I I C+ + + F +MV ++
Sbjct: 520 HGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIE 579
Query: 399 PRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM--AK 456
+ I+ Y +A++ + ++ YS L +H +N ++ A
Sbjct: 580 QNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSL--IHGLSNIGLVDSAN 637
Query: 457 NVLSEMMKNGLRPNVSVYRRVL 478
+L EM K GL PNV Y ++
Sbjct: 638 QLLDEMRKEGLSPNVVCYTALI 659
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 78/182 (42%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N LI +C + LL EM + G +++YN ++ CK G+ + +L EEM+
Sbjct: 446 NALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVR 505
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
R PD TY + + C +GK + A +++ K G P T+ I GY R E+
Sbjct: 506 RGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEE 565
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
K + ++Y L + +N N A + +M G+ + Y ++
Sbjct: 566 GEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIH 625
Query: 480 HL 481
L
Sbjct: 626 GL 627
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 73/176 (41%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y I+I C+ + L EM + E + Y ++ C+NG +A L ++M
Sbjct: 550 YGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMR 609
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R + TY I +G D A ++M K GL P + + A I GY +
Sbjct: 610 SRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMH 669
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + + + Y+++ + H K N A +L+EM + G+ P+ Y
Sbjct: 670 KVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTY 725
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/196 (19%), Positives = 81/196 (41%), Gaps = 1/196 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +LI + + F +L EM G P + YN ++ C+ G + A ++ ++M+
Sbjct: 270 YGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMI 329
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+++T I C+ + + A + +M+ G T + I + R++
Sbjct: 330 SNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFD 389
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A +++ + ++ L +LL S +N A + +++ G N ++
Sbjct: 390 SALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALI 449
Query: 479 KHL-HTSHQEHMAKCL 493
L +E AK L
Sbjct: 450 HGLCEAGSKEEAAKLL 465
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 110/245 (44%), Gaps = 10/245 (4%)
Query: 239 LISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSY 298
L+ +K + K+ VV G C V A E+ L+EM K E +
Sbjct: 446 LVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANEL-----LHEMCS---KGLELNIFT 497
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C+ + + +++M + G +P TY ++G LC++ + A LL+EML
Sbjct: 498 YNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEML 557
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P +TY + + C G+ + M+++ + P T+ + +K Y I +
Sbjct: 558 DKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMK 617
Query: 419 DAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ Y + + + + N Y++L H K N A SEM++ G R S Y +
Sbjct: 618 STTEIYKGMLSQEVVPNENT-YNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNAL 676
Query: 478 LKHLH 482
++ L+
Sbjct: 677 IRLLN 681
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 81/179 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y I++ C + + LL EM G E + Y V+ +LC GQ +DA ++E
Sbjct: 285 VVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVE 344
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M+ DA + + CR G A N+F++M KRGL T+ A I G
Sbjct: 345 DMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAG 404
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
++A + + DK + Y++L + K A V ++M++ + PNV Y
Sbjct: 405 ELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTY 463
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 90/198 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ + ++ CR+ D R+ EM++ G +TY ++ LC+ G+ +A +L+
Sbjct: 355 AAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQ 414
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM + DA+TY + I C+VGK AF N+MV++ + P + T+ A G
Sbjct: 415 EMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQG 474
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
A + + K + Y+ L + K N A + +M + GL+P+V Y
Sbjct: 475 DVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYT 534
Query: 476 RVLKHLHTSHQEHMAKCL 493
++ L S + A L
Sbjct: 535 TIIGALCQSKELDRAHSL 552
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 73/179 (40%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y +I +C+ + LL EM G +P +TYN ++ C +G+ LLE
Sbjct: 530 VYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLE 589
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
ML +N HP+ TY + C + M+ + + P T+ IKG+
Sbjct: 590 WMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKAR 649
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
++A + +K + Y+ L L +K A+ + +M K L VY
Sbjct: 650 NMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVY 708
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 3/167 (1%)
Query: 315 PRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIV 374
P D V++ Q E T +YN +L LC G+ DA +L +EM PD +TY I +
Sbjct: 237 PLDEAVQLFQELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVH 293
Query: 375 YSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSS 434
C + + + A ++M RGL+ + + I + DA + V
Sbjct: 294 GYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVL 353
Query: 435 SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+++ + S + + A+N EM K GL + Y ++ L
Sbjct: 354 DAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGL 400
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 84/187 (44%), Gaps = 2/187 (1%)
Query: 296 VSYYNILIKEMCR-RCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELL 354
V YN L + RC R LL EMR+ G + +T+N V+ LCK+G+ A L
Sbjct: 345 VVTYNTLADACFKCRCSSDALR-LLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCL 403
Query: 355 EEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIF 414
+M PD ITY I C+ G A+ ++MV+RGL+ T +
Sbjct: 404 NKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKE 463
Query: 415 YRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
RYE+A + + + Y + + + K N A + EM++ L P++S Y
Sbjct: 464 KRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTY 523
Query: 475 RRVLKHL 481
++K L
Sbjct: 524 NTLIKGL 530
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 89/198 (44%), Gaps = 3/198 (1%)
Query: 281 LYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGV 340
L EM + +K T + +NI+IK +C+ + +G L +M G P +TYN ++
Sbjct: 368 LEEMREKGVKAT---LVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHA 424
Query: 341 LCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
CK G A A L++EM+ R D T + C+ +++ A +RG P
Sbjct: 425 HCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPD 484
Query: 401 LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLS 460
++ + YF Y E A + +K + S Y+ L + A + L+
Sbjct: 485 EVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLN 544
Query: 461 EMMKNGLRPNVSVYRRVL 478
E+M+ GL P+ + Y ++
Sbjct: 545 ELMEKGLVPDDTTYNIII 562
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 2/185 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L+ CR+ R LL M++ G P TYN ++ + G A +++E M
Sbjct: 242 YNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMT 301
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG-LQPRLATHAAFIKGYFIFYRY 417
PD TY + C+ GK D AF ++M + G L P + T+ F
Sbjct: 302 ANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCS 361
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
DA + + +K ++ + ++++ K+ A L++M +GL P+V Y +
Sbjct: 362 SDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTL 421
Query: 478 LKHLH 482
+ H H
Sbjct: 422 I-HAH 425
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 68/153 (44%), Gaps = 24/153 (15%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
+ YNI+I C+ D + +M + +P +T N ++ LC NG+ A +L E
Sbjct: 556 TTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFES 615
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
+ + D ITY I C+ G D A +FF M RGLQP
Sbjct: 616 WVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQP----------------- 658
Query: 417 YEDAYKY-VVLS----ADKYKSSSNMLYSLLAS 444
DA+ Y VVLS A + + + NML+ L S
Sbjct: 659 --DAFTYNVVLSALSEAGRTEEAQNMLHKLAES 689
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 79/174 (45%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L EM + P TYN ++ L + G+ +A + L E++ + PD TY I I C
Sbjct: 507 LWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYC 566
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ G + AF F N+MV+ +P + T + G + + + A K +K K +
Sbjct: 567 KEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVI 626
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAK 491
Y+ L K+ + A + ++M GL+P+ Y VL L + + A+
Sbjct: 627 TYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQ 680
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 81/176 (46%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YN LI C+ + L+ EM + G + T T N VL LCK + +A LL+
Sbjct: 415 VITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQ 474
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
R PD ++Y + + + A +++M+++ L P ++T+ IKG
Sbjct: 475 SPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMG 534
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
R ++A + +K + Y+++ + K + A ++M++N +P+V
Sbjct: 535 RLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDV 590
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 73/188 (38%), Gaps = 9/188 (4%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N+L+ C + L M+ G P +TYN +L C+ G +A LL M
Sbjct: 207 FNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMK 266
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P TY + R+G A M G +P L T+ G + +
Sbjct: 267 KDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVD 326
Query: 419 DAYKYVVLSADKYKSSSNML-----YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
+A++ D+ + +L Y+ LA K A +L EM + G++ +
Sbjct: 327 EAFRL----KDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVT 382
Query: 474 YRRVLKHL 481
+ V+K L
Sbjct: 383 HNIVIKGL 390
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 39/96 (40%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P T+N ++ C G ADA L M G PDA+TY + CR G A
Sbjct: 202 PNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARAL 261
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYV 424
+M K G+ P T+ + Y + A K V
Sbjct: 262 LARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVV 297
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 278 VLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYV 337
L L+E +V K + V YN LI+ MC+ D +M G +P TYN V
Sbjct: 609 ALKLFE--SWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVV 666
Query: 338 LGVLCKNGQDADACELLEEM 357
L L + G+ +A +L ++
Sbjct: 667 LSALSEAGRTEEAQNMLHKL 686
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 4/215 (1%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+S +N L+ +C++ D K LL ++ + G P TYN+ + LC+ G+ A ++
Sbjct: 216 LSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVG 275
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
++ + PD +TY I C+ KF A + ++V GL+P T+ I GY
Sbjct: 276 RLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGG 335
Query: 416 RYEDAYKYVVLSA-DKYKSSSNMLYSLLASL-HDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
+ A + +V + + + SL+ L H+ N +A + +E + G++PNV +
Sbjct: 336 MVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALA--LFNEALGKGIKPNVIL 393
Query: 474 YRRVLKHLHTSHQEHMAKCLSSRYSSLSLGSSVEA 508
Y ++K L A L+S S L V+
Sbjct: 394 YNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQT 428
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 1/178 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+NILI + + ++L M G +P TYN +L LCK + D E + M+
Sbjct: 464 FNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMV 523
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C P+ T+ I + CR K D A +M + + P T I G+ +
Sbjct: 524 EKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLD 583
Query: 419 DAYKYVVLSADKYKSS-SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
AY + Y S S Y+++ + N MA+ + EM+ L P+ YR
Sbjct: 584 GAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYR 641
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 81/217 (37%), Gaps = 10/217 (4%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
+ K V + E YN LI C+ + +LV G P TY ++ LC
Sbjct: 309 LGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCH 368
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
G+ A L E LG+ P+ I Y I G A ++M ++GL P + T
Sbjct: 369 EGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQT 428
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
+ G DA V + K +++L + A +L MM
Sbjct: 429 FNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMM 488
Query: 464 KNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSL 500
NG+ P+V Y +L L C +S+Y +
Sbjct: 489 DNGVDPDVYTYNSLLNGL----------CKTSKYEDV 515
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 56/133 (42%), Gaps = 7/133 (5%)
Query: 279 LGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV---GCEPITLTYN 335
LGL E K K + LI C+ D G L +M +V C T TYN
Sbjct: 551 LGLLEEMKN--KSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCS--TPTYN 606
Query: 336 YVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR 395
++ + A +L +EM+ R PD TY + + C+ G D+ + F +M++
Sbjct: 607 IIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMEN 666
Query: 396 GLQPRLATHAAFI 408
G P L T I
Sbjct: 667 GFIPSLTTLGRVI 679
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 108/268 (40%), Gaps = 32/268 (11%)
Query: 235 FLPVLISSKALTKKGIWRVVEVLNQV----GGSCLVSGVRALIEMFSVLGLYEMAKYVIK 290
LP +++ +K + +E+ N + G +S R++IE + G +E + V+
Sbjct: 5 LLPKHVTTVIRCQKDPMKALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLV 64
Query: 291 KTERKVS------YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKN 344
+ V Y +K R+ + ++ M CEP +YN ++ +L +
Sbjct: 65 DMRQNVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDS 124
Query: 345 GQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
G A ++ M R PD ++ I + CR + A N M +G + + +
Sbjct: 125 GYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAY 184
Query: 405 AAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS-----------LLASLHDKNNNPV 453
+ G+ YE+ +K + Y+ ML S LL L K +
Sbjct: 185 CTVVGGF-----YEENFK-----DEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKE 234
Query: 454 MAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
K +L +++K G+ PN+ Y ++ L
Sbjct: 235 CEK-LLDKVIKRGVLPNLFTYNFFIQGL 261
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 74/188 (39%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y LI +C + L E G +P + YN ++ L G +A +L EM
Sbjct: 359 YRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMS 418
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+ T+ I + C++G A M+ +G P + T I GY + E
Sbjct: 419 EKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKME 478
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + + + D Y+ L + K + M++ G PN+ + +L
Sbjct: 479 NALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILL 538
Query: 479 KHLHTSHQ 486
+ L H+
Sbjct: 539 ESLCRYHK 546
>gi|224115398|ref|XP_002317023.1| predicted protein [Populus trichocarpa]
gi|222860088|gb|EEE97635.1| predicted protein [Populus trichocarpa]
Length = 455
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 9/190 (4%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V YNI+++ +C ++ LL EM P +TYN ++G L +G+ A E+L+
Sbjct: 160 VVSYNIILRSLCHEGRWEEANQLLAEMDSEERSPSLVTYNILIGSLAFHGRIEHAFEVLD 219
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI----KGY 411
EM+ + P A TY I + C+ GK D+ +QM+ P T A +G
Sbjct: 220 EMVRASFKPSATTYNPIIAHLCKEGKLDLVIKCLDQMIHHRCNPNEGTFNAIAVLCKQG- 278
Query: 412 FIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
R +A+ + +K +SS++ Y + + + N A +L EM K G P+
Sbjct: 279 ----RVPEAFSIIQNLGNKQRSSTHDFYKGVITSLCRKGNTYPAFQLLYEMTKFGFVPDP 334
Query: 472 SVYRRVLKHL 481
Y +++ L
Sbjct: 335 YTYSSLIRGL 344
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 88/183 (48%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN L++ +C + LL ++ G P TY+++L K +A +LL+E++
Sbjct: 58 YNSLVRGLCMHGNLNQSLQLLDKLMWKGLVPNEFTYSFLLEAAYKERGVNEAMKLLDEII 117
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+ ++Y + + C+ G+ + A FF + +G P + ++ ++ R+E
Sbjct: 118 AKGWQPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWE 177
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + + + +S S + Y++L + A VL EM++ +P+ + Y ++
Sbjct: 178 EANQLLAEMDSEERSPSLVTYNILIGSLAFHGRIEHAFEVLDEMVRASFKPSATTYNPII 237
Query: 479 KHL 481
HL
Sbjct: 238 AHL 240
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 125/280 (44%), Gaps = 27/280 (9%)
Query: 234 GFLPVLISS----KALTKKGIWR-----VVEVLNQVGGSCLVSGVRALIEMFSVLGLYEM 284
GF P ++S ++L +G W + E+ ++ LV+ LI + G E
Sbjct: 155 GFNPNVVSYNIILRSLCHEGRWEEANQLLAEMDSEERSPSLVT-YNILIGSLAFHGRIEH 213
Query: 285 AKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLV----EMRQVGCEPITLTYN 335
A V+ + R + YN +I +C+ +G DL++ +M C P T+N
Sbjct: 214 AFEVLDEMVRASFKPSATTYNPIIAHLCK----EGKLDLVIKCLDQMIHHRCNPNEGTFN 269
Query: 336 YVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR 395
+ VLCK G+ +A +++ + + Y+ I CR G AF +M K
Sbjct: 270 -AIAVLCKQGRVPEAFSIIQNLGNKQRSSTHDFYKGVITSLCRKGNTYPAFQLLYEMTKF 328
Query: 396 GLQPRLATHAAFIKGYFIFYRYEDAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVM 454
G P T+++ I+G I ++A + + +L + Y+ + +L+ K+ +
Sbjct: 329 GFVPDPYTYSSLIRGLCIEGMLDEALEIFRLLEENDYRPILDNFNALILGFC-KSGRTDL 387
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVLKHL-HTSHQEHMAKCL 493
+ ++L M++ G PN + Y +++ + H +E A+ L
Sbjct: 388 SLDILEMMVEKGYTPNETTYTIIVEGIAHEEEKELAAEVL 427
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 73/175 (41%), Gaps = 1/175 (0%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M + G P +Y +++ LCK G A +L+E+M + +TY + C G
Sbjct: 11 MIESGIIPDAASYTFLVNNLCKRGNIGHAMQLVEKMEENGYPTNTVTYNSLVRGLCMHGN 70
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
+ + ++++ +GL P T++ ++ + +A K + K + + Y++
Sbjct: 71 LNQSLQLLDKLMWKGLVPNEFTYSFLLEAAYKERGVNEAMKLLDEIIAKGWQPNLVSYNV 130
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL-HTSHQEHMAKCLSS 495
L + K A ++ G PNV Y +L+ L H E + L+
Sbjct: 131 LLTGLCKEGRTEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEANQLLAE 185
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 59/147 (40%)
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
Y V+ LC+ G A +LL EM PD TY I C G D A F +
Sbjct: 302 YKGVITSLCRKGNTYPAFQLLYEMTKFGFVPDPYTYSSLIRGLCIEGMLDEALEIFRLLE 361
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPV 453
+ +P L A I G+ R + + + + +K + + Y+++
Sbjct: 362 ENDYRPILDNFNALILGFCKSGRTDLSLDILEMMVEKGYTPNETTYTIIVEGIAHEEEKE 421
Query: 454 MAKNVLSEMMKNGLRPNVSVYRRVLKH 480
+A VL E++ + + R VL++
Sbjct: 422 LAAEVLKELLLRQVMRRNTAERLVLQY 448
>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 997
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 94/230 (40%), Gaps = 35/230 (15%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACEL-- 353
V Y L+ C+ + R LL M GCEP + Y+ ++ LCK G+ +A E+
Sbjct: 639 VVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKT 698
Query: 354 ---------------------------------LEEMLGRNCHPDAITYEIFIVYSCRVG 380
L +ML +C P+ + Y I C+VG
Sbjct: 699 EMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVG 758
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
K D A+ M ++G QP + T+ A I G+ + + E + + K + + + Y
Sbjct: 759 KTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYR 818
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
+L KN +A N+L EM + + + YR+V++ + E +
Sbjct: 819 VLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLG 868
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 92/216 (42%), Gaps = 17/216 (7%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y I++ C+ + R EMR+VGC P +TY ++ K + + A EL E
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 577
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV----------------KRGLQP 399
ML C P+ +TY I C+ G+ + A F +M +P
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 637
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
+ T+ A + G+ +R E+A K + + + + ++Y L K A+ V
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 697
Query: 460 SEMMKNGLRPNVSVYRRVL-KHLHTSHQEHMAKCLS 494
+EM ++G + Y ++ ++ Q+ +K LS
Sbjct: 698 TEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLS 733
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 76/204 (37%), Gaps = 16/204 (7%)
Query: 306 MCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPD 365
+C ++ ++ EM G P T TY+ VL LC + A L EEM D
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 517
Query: 366 AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV 425
TY I + C+ G + A +FN+M + G P + T+ A I Y + A +
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 577
Query: 426 LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM----------------KNGLRP 469
+ + + YS L H K A + M N RP
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 637
Query: 470 NVSVYRRVLKHLHTSHQEHMAKCL 493
NV Y +L SH+ A+ L
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKL 661
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 84/223 (37%), Gaps = 21/223 (9%)
Query: 280 GLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
G YE A VI++ + S Y+ ++ +C + L EM++ G TY
Sbjct: 462 GKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTY 521
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
++ CK G A + EM C P+ +TY I + K A F M+
Sbjct: 522 TIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLS 581
Query: 395 RGLQPRLATHAAFIKGYF----------IFYRY------EDAYKYVVLSADKYKSSSNML 438
G P + T++A I G+ IF R D Y D + + +
Sbjct: 582 EGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVT 641
Query: 439 YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y L K++ A+ +L M G PN VY ++ L
Sbjct: 642 YGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGL 684
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 83/208 (39%), Gaps = 24/208 (11%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE-LLEE 356
+Y LI +C F+ D L MR C P +TY+ +L C N + C+ +L
Sbjct: 304 FYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL-CGCLNKKQLGRCKRVLNM 362
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF---- 412
M+ C+P + + C G A+ +MVK G P + I
Sbjct: 363 MMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKD 422
Query: 413 -----IFYRYEDAYKY-----VVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM 462
+ E AY VVL+ S + L S A ++K A +V+ EM
Sbjct: 423 SLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCS--AGKYEK------AFSVIREM 474
Query: 463 MKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
+ G P+ S Y +VL +L + + +A
Sbjct: 475 IGQGFIPDTSTYSKVLNYLCNASKMELA 502
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 79/202 (39%), Gaps = 40/202 (19%)
Query: 251 WRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKE 305
+++++++ + G V A+I+ F ++G E ++++ K Y +LI
Sbjct: 764 YKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDH 823
Query: 306 MCRRCDFKGPRDLLVEMRQVGCEPITLTYNYV-----------LGVLCKNGQDADA---- 350
C+ +LL EM+Q T Y V LG+L + GQD A
Sbjct: 824 CCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLS 883
Query: 351 ------------------CELLEEM--LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN 390
LLEE+ + TY I C K + AF F+
Sbjct: 884 VYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFS 943
Query: 391 QMVKRGLQPRLATHAAFIKGYF 412
+M K+G+ P + + + IKG F
Sbjct: 944 EMTKKGVIPEMQSFCSLIKGLF 965
>gi|225435096|ref|XP_002281474.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Vitis vinifera]
Length = 501
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 2/178 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+NI+IK + ++ + EM +P +T+N ++G LC G A LLE+M+
Sbjct: 230 FNIIIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIGFLCGKGDLDGAMGLLEDMI 289
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P+A+TY + + C +GK+ A M +G +PRL + R +
Sbjct: 290 QKRHRPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNFGVLMSDLGRRGRID 349
Query: 419 DAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
D+ K ++L + + +++ Y++L + K + A VL EM G PN + YR
Sbjct: 350 DS-KTLLLEMKRRRFKPDVVTYNILINHLCKEGRALEAYKVLVEMQVGGCEPNAATYR 406
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 16/213 (7%)
Query: 274 EMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLT 333
++ +GL E + K+ Y +L++ +C +K + ++ +M GC+P L
Sbjct: 277 DLDGAMGLLE--DMIQKRHRPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLN 334
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV 393
+ ++ L + G+ D+ LL EM R PD +TY I I + C+ G+ A+ +M
Sbjct: 335 FGVLMSDLGRRGRIDDSKTLLLEMKRRRFKPDVVTYNILINHLCKEGRALEAYKVLVEMQ 394
Query: 394 KRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSA-------DKYKSSSNMLYSLLASLH 446
G +P AT+ + G+ +E K VLSA + +S +++ LL
Sbjct: 395 VGGCEPNAATYRMMVDGFCQVEDFEGGLK--VLSAMLMCGHCPRLESFCDLVVGLL---- 448
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
KN A VL EM K +R ++ + ++K
Sbjct: 449 -KNGKIDGACFVLEEMEKRKMRFHLEAWEALVK 480
>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
Length = 676
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%)
Query: 328 EPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFN 387
+P TY ++G CK G+ A A LL M+ + P+ TY I C+ G FD AF
Sbjct: 319 KPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFE 378
Query: 388 FFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHD 447
N+M G P + T+ A I G+ + ++AYK + ++ + + Y++L + H
Sbjct: 379 LMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHC 438
Query: 448 KNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
K + A ++ +M + P++ Y ++
Sbjct: 439 KQGHITCALDLFKQMAEKSCHPDIHTYTTII 469
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 1/180 (0%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
++++ CR+ F+ DL M ++G P + Y+ + LC+ G A +LEEM+G
Sbjct: 220 TVVVRAFCRQGRFRNVTDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVG 279
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK-RGLQPRLATHAAFIKGYFIFYRYE 418
+ P+ T+ I C++G + AF F ++VK +P + T+ I GY +
Sbjct: 280 KGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLA 339
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + ++ + + Y+ L H K + A ++++M G PN+ Y ++
Sbjct: 340 RAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAII 399
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 8/152 (5%)
Query: 260 VGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLL 319
+GG C G A EM + + V + + Y LI C+ F +L+
Sbjct: 329 IGGYC-KEGKLARAEML-------LGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELM 380
Query: 320 VEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRV 379
+M+ G P TYN ++G CK G+ +A ++L + H D +TY I I C+
Sbjct: 381 NKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQ 440
Query: 380 GKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
G A + F QM ++ P + T+ I Y
Sbjct: 441 GHITCALDLFKQMAEKSCHPDIHTYTTIIAMY 472
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 81/186 (43%), Gaps = 4/186 (2%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+ L+ CR F+ LL M G + T V+ C+ G+ + +L M
Sbjct: 184 FRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFRRMS 243
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ + Y +I C G AF+ +MV +GL+P + TH + I G E
Sbjct: 244 EMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWME 303
Query: 419 DAYKYV--VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
A++ ++ + YK + + Y+++ + K A+ +L M++ GL PN + Y
Sbjct: 304 RAFRLFLKLVKSSSYKPNVHT-YTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTY-T 361
Query: 477 VLKHLH 482
L H H
Sbjct: 362 TLIHGH 367
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 70/166 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ILI E C++ DL +M + C P TY ++ + C+ Q + +L ++ L
Sbjct: 430 YTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCL 489
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P TY I CR+GK A F +MV+ G P T+ A I R E
Sbjct: 490 SIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLCKESRLE 549
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMK 464
+A DK+ ++ LA + + + +A + L + K
Sbjct: 550 EARALFETMLDKHLVPCDVTRVTLAYEYCRRDKITIAVSFLDRLDK 595
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 44/97 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +I CR + M Q GC P ++TY ++ LCK + +A L E ML
Sbjct: 500 YTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLCKESRLEEARALFETML 559
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR 395
++ P +T CR K +A +F +++ KR
Sbjct: 560 DKHLVPCDVTRVTLAYEYCRRDKITIAVSFLDRLDKR 596
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 69/175 (39%), Gaps = 10/175 (5%)
Query: 244 ALTKKG-IWRVVEVLNQVGGSCLVSGV---RALIEMFSVLGLYEMAKYVIKKTERKVSY- 298
L ++G + + VL ++ G L V +LI+ +G E A + K + SY
Sbjct: 260 GLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYK 319
Query: 299 -----YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACEL 353
Y ++I C+ LL M + G P T TY ++ CK G A EL
Sbjct: 320 PNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFEL 379
Query: 354 LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFI 408
+ +M P+ TY I C+ GK A+ +GL T+ I
Sbjct: 380 MNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILI 434
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 73/169 (43%), Gaps = 5/169 (2%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKN-GQDADACELLEEML--GRNCHPDAITYEIFI 373
D+L+E+R G + T N+VL V ++ G A A E + M PD ++ +
Sbjct: 129 DMLLELRSHGLPLVVETANWVLRVGLRHPGCFAHAREAFDGMARAAGGVRPDHRSFRALV 188
Query: 374 VYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKS 433
+ CR G+F+ A M +G AT ++ + R+ + + + +
Sbjct: 189 LGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTD-LFRRMSEMGT 247
Query: 434 SSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
NM+ YS + A +VL EM+ GL+PNV + ++ L
Sbjct: 248 PPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGL 296
>gi|356544457|ref|XP_003540667.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 711
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 70/135 (51%), Gaps = 4/135 (2%)
Query: 263 SCLVSGVRALIEMFSVLGLYE-MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVE 321
+ L+ R + +++ +++ M +Y ++ T +V++ N L+ + +K RD++ +
Sbjct: 519 TALLDAFRRAGDTQTLMKIWKLMRRYKVEGT--RVTF-NTLVDGFAKHGHYKEARDVISK 575
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
VG P +TYN ++ + GQ + ELLEEM N PD++TY I RV
Sbjct: 576 FANVGLHPTVMTYNMLMNAYARGGQHSKLPELLEEMAAHNLKPDSVTYSTMIYAFLRVRD 635
Query: 382 FDVAFNFFNQMVKRG 396
F AF + +MVK G
Sbjct: 636 FSQAFFYHQEMVKSG 650
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 132/334 (39%), Gaps = 46/334 (13%)
Query: 133 VSEIIELLR--SGDSETESKLLSMSVSLSNASVIEILRVLNSEKVSALC--FLKYMREIM 188
V EI++L R + + E L +S E+L++L E++ C F ++MR
Sbjct: 168 VGEIVQLARNLTQNLTLEEALAEYEGRVSEKDCWEVLKLLGEEQLLVCCLYFFQWMRSQE 227
Query: 189 PEFYKNSDICSLVIDNCGRLDDYETMRQLLN---------DFNVYQVCLN--------EK 231
P C+++ G+ + + L D +VY ++ E
Sbjct: 228 PSLV-TPRACTVLFPLLGKARMGDKLMLLFTNLPSGREFRDVHVYNAAISGLLSSGRCED 286
Query: 232 AF---------GFLP---------VLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALI 273
A+ LP +++ + K W+ E +N G + ALI
Sbjct: 287 AWKVYESMEADNVLPDHVTCSIMVIVMRKLGHSAKDAWQFFEKMNGKGVKWGEEVLGALI 346
Query: 274 EMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCE 328
+ F V GL A ++ + E+K YN L+ C+ + L +EM+ G +
Sbjct: 347 KSFCVEGLMSEALIILSELEKKGVSSNAIVYNTLMDAYCKSNRVEEAEGLFIEMKTKGIK 406
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFI-VYSCRVGKFDVAFN 387
T+N ++ + Q +L+ EM P+A +Y I Y + D+A +
Sbjct: 407 HTEATFNILMYAYSRKMQPEIVEKLMAEMQDAGLKPNAKSYTCLISAYGKQKNMSDMAAD 466
Query: 388 FFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAY 421
F +M K G++P ++ A I Y + +E AY
Sbjct: 467 AFLKMKKDGIKPTSHSYTALIHAYSVSGWHEKAY 500
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 65/158 (41%), Gaps = 5/158 (3%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI +SV G +E A + +R+ + Y L+ R D + + MR+
Sbjct: 485 ALIHAYSVSGWHEKAYAAFENMQREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMRRY 544
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
E +T+N ++ K+G +A +++ + HP +TY + + R G+
Sbjct: 545 KVEGTRVTFNTLVDGFAKHGHYKEARDVISKFANVGLHPTVMTYNMLMNAYARGGQHSKL 604
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY 423
+M L+P T++ I + + A+ Y
Sbjct: 605 PELLEEMAAHNLKPDSVTYSTMIYAFLRVRDFSQAFFY 642
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 67/177 (37%), Gaps = 36/177 (20%)
Query: 334 YNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK-FDVAFNFFNQM 392
YN + L +G+ DA ++ E M N PD +T I ++ ++G A+ FF +M
Sbjct: 271 YNAAISGLLSSGRCEDAWKVYESMEADNVLPDHVTCSIMVIVMRKLGHSAKDAWQFFEKM 330
Query: 393 VKRGLQPRLATHAAFIKGY------------------------FIFY-----------RY 417
+G++ A IK + I Y R
Sbjct: 331 NGKGVKWGEEVLGALIKSFCVEGLMSEALIILSELEKKGVSSNAIVYNTLMDAYCKSNRV 390
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
E+A + K + +++L + + P + + +++EM GL+PN Y
Sbjct: 391 EEAEGLFIEMKTKGIKHTEATFNILMYAYSRKMQPEIVEKLMAEMQDAGLKPNAKSY 447
>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
Length = 946
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 94/230 (40%), Gaps = 35/230 (15%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACEL-- 353
V Y L+ C+ + R LL M GCEP + Y+ ++ LCK G+ +A E+
Sbjct: 598 VVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKT 657
Query: 354 ---------------------------------LEEMLGRNCHPDAITYEIFIVYSCRVG 380
L +ML +C P+ + Y I C+VG
Sbjct: 658 EMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVG 717
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
K D A+ M ++G QP + T+ A I G+ + + E + + K + + + Y
Sbjct: 718 KTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYR 777
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
+L KN +A N+L EM + + + YR+V++ + E +
Sbjct: 778 VLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLG 827
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 92/216 (42%), Gaps = 17/216 (7%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y I++ C+ + R EMR+VGC P +TY ++ K + + A EL E
Sbjct: 477 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 536
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMV----------------KRGLQP 399
ML C P+ +TY I C+ G+ + A F +M +P
Sbjct: 537 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 596
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
+ T+ A + G+ +R E+A K + + + + ++Y L K A+ V
Sbjct: 597 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 656
Query: 460 SEMMKNGLRPNVSVYRRVL-KHLHTSHQEHMAKCLS 494
+EM ++G + Y ++ ++ Q+ +K LS
Sbjct: 657 TEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLS 692
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 76/204 (37%), Gaps = 16/204 (7%)
Query: 306 MCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPD 365
+C ++ ++ EM G P T TY+ VL LC + A L EEM D
Sbjct: 417 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 476
Query: 366 AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV 425
TY I + C+ G + A +FN+M + G P + T+ A I Y + A +
Sbjct: 477 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 536
Query: 426 LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM----------------KNGLRP 469
+ + + YS L H K A + M N RP
Sbjct: 537 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 596
Query: 470 NVSVYRRVLKHLHTSHQEHMAKCL 493
NV Y +L SH+ A+ L
Sbjct: 597 NVVTYGALLDGFCKSHRVEEARKL 620
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 84/223 (37%), Gaps = 21/223 (9%)
Query: 280 GLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
G YE A VI++ + S Y+ ++ +C + L EM++ G TY
Sbjct: 421 GKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTY 480
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
++ CK G A + EM C P+ +TY I + K A F M+
Sbjct: 481 TIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLS 540
Query: 395 RGLQPRLATHAAFIKGYF----------IFYR------YEDAYKYVVLSADKYKSSSNML 438
G P + T++A I G+ IF R D Y D + + +
Sbjct: 541 EGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVT 600
Query: 439 YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y L K++ A+ +L M G PN VY ++ L
Sbjct: 601 YGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGL 643
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 84/208 (40%), Gaps = 24/208 (11%)
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE-LLEE 356
+Y LI +C F+ D L MR C P +TY+ +L C N + C+ +L
Sbjct: 263 FYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL-CGCLNKKQLGRCKRVLNM 321
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK------- 409
M+ C+P + + C G A+ +MVK G P + I
Sbjct: 322 MMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKD 381
Query: 410 --GYFIFYRYEDAYKY-----VVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEM 462
+ + E AY VVL+ S + L S A ++K A +V+ EM
Sbjct: 382 SLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCS--AGKYEK------AFSVIREM 433
Query: 463 MKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
+ G P+ S Y +VL +L + + +A
Sbjct: 434 IGQGFIPDTSTYSKVLNYLCNASKMELA 461
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 79/202 (39%), Gaps = 40/202 (19%)
Query: 251 WRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKE 305
+++++++ + G V A+I+ F ++G E ++++ K Y +LI
Sbjct: 723 YKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDH 782
Query: 306 MCRRCDFKGPRDLLVEMRQVGCEPITLTYNYV-----------LGVLCKNGQDADA---- 350
C+ +LL EM+Q T Y V LG+L + GQD A
Sbjct: 783 CCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLS 842
Query: 351 ------------------CELLEEM--LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFN 390
LLEE+ + TY I C K + AF F+
Sbjct: 843 VYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFS 902
Query: 391 QMVKRGLQPRLATHAAFIKGYF 412
+M K+G+ P + + + IKG F
Sbjct: 903 EMTKKGVIPEMQSFCSLIKGLF 924
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 80/179 (44%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N LI C+R + ++ M +P + +YN +L C+ G ++A L ++ML
Sbjct: 337 NSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQ 396
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
P +TY + CRVG FD A ++ M+KRG+ P ++ + G F +E
Sbjct: 397 EGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEG 456
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + + S + ++ + S K V A+ + +M G P+ YR ++
Sbjct: 457 ASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLI 515
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 75/169 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y +LI CR LL EM ++G + N ++ CK G+ +A ++ M+
Sbjct: 301 YGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMV 360
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
N PD+ +Y + CR G AFN ++M++ G++P + T+ +KG ++
Sbjct: 361 DWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFD 420
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
DA + L + + + YS L K N A + +++ G
Sbjct: 421 DALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGF 469
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 81/190 (42%), Gaps = 2/190 (1%)
Query: 286 KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNG 345
K + + E V YN L+K +CR F + M + G P + Y+ +L L K
Sbjct: 393 KMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKME 452
Query: 346 QDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHA 405
A L +++L R IT+ I C++GK A F++M G P T+
Sbjct: 453 NFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYR 512
Query: 406 AFIKGYFIFYRYEDAYKYV-VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMK 464
I GY A+K + + S M SL++ L K+ V ++L+EM
Sbjct: 513 TLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLF-KSRRLVEVTDLLTEMGI 571
Query: 465 NGLRPNVSVY 474
GL PN+ Y
Sbjct: 572 RGLTPNIVTY 581
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 74/175 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ L+ + + +F+G L ++ G +T+N ++ LCK G+ +A E+ ++M
Sbjct: 441 YSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMK 500
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C PD ITY I C+ AF M + + P + + + I G F R
Sbjct: 501 DLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLV 560
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
+ + + + + + Y L K A + EM +NGL N+ +
Sbjct: 561 EVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIII 615
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 89/219 (40%), Gaps = 6/219 (2%)
Query: 269 VRALIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMR 323
V ++ F G + A +KK E + Y+ LI D + + +L M
Sbjct: 195 VSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMS 254
Query: 324 QVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCH-PDAITYEIFIVYSCRVGKF 382
+ G +TY ++ CK + +A ++L M PD Y + I CR GK
Sbjct: 255 EKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKI 314
Query: 383 DVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLL 442
D A ++M++ GL+ L + I GY +A + D + Y+ L
Sbjct: 315 DDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTL 374
Query: 443 ASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+ + + A N+ +M++ G+ P V Y +LK L
Sbjct: 375 LDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGL 413
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 1/154 (0%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M + G P + N +L L KNG+ A + ++M+ PD I + C+ GK
Sbjct: 148 MGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGK 207
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
D A F +M G++P + T+ + I GY E A + ++K S + + Y+L
Sbjct: 208 VDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTL 267
Query: 442 LASLHDKNNNPVMAKNVLSEMMKN-GLRPNVSVY 474
L + K A+ VL M + L P+ Y
Sbjct: 268 LIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAY 301
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 53/124 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNI I +C+ R + G P TY ++ G +A L +EML
Sbjct: 683 YNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEML 742
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
R P+ +TY I C+ D A F+++ ++GL P + T+ I GY +
Sbjct: 743 RRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMD 802
Query: 419 DAYK 422
A+K
Sbjct: 803 AAFK 806
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
EM + G P +TYN ++ LCK+ A L ++ + P+ +TY I C++G
Sbjct: 740 EMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIG 799
Query: 381 KFDVAFNFFNQMVKRGLQPRL 401
D AF ++M++ G+ P +
Sbjct: 800 NMDAAFKLKDKMIEEGISPSI 820
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 38/82 (46%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P + YN + LCK G+ DA + + PD TY I G D AF
Sbjct: 678 PNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRL 737
Query: 389 FNQMVKRGLQPRLATHAAFIKG 410
++M++RGL P + T+ A I G
Sbjct: 738 RDEMLRRGLVPNIVTYNALING 759
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 83/200 (41%), Gaps = 41/200 (20%)
Query: 258 NQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKK--TERKVSYYNILIKEMCRRCDFKGP 315
++VG S L+ G L +M + G + K ++ + T+ ++++ N +I +C+
Sbjct: 437 DEVGYSTLLDG---LFKMENFEGASTLWKDILARGFTKSRITF-NTMISGLCKMGKMVEA 492
Query: 316 RDLLVEMRQVGCEPITLTYNYVLGVLCKN---GQD------------------------- 347
++ +M+ +GC P +TY ++ CK GQ
Sbjct: 493 EEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISG 552
Query: 348 -------ADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR 400
+ +LL EM R P+ +TY I C+ G D AF+ + +M + GL
Sbjct: 553 LFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSAN 612
Query: 401 LATHAAFIKGYFIFYRYEDA 420
+ + + G + R ++A
Sbjct: 613 IIICSTMVSGLYRLGRIDEA 632
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 82/185 (44%), Gaps = 5/185 (2%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M +VG P + ++ CK+G+ +A +++M P+ +TY I +G
Sbjct: 182 QMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLG 241
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSS---SNM 437
+ A M ++G+ + T+ IKGY + ++A K VL + +++
Sbjct: 242 DVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEK--VLRGMQEEAALVPDER 299
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRY 497
Y +L + + A +L EM++ GL+ N+ + ++ + H A+ + +R
Sbjct: 300 AYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRM 359
Query: 498 SSLSL 502
+L
Sbjct: 360 VDWNL 364
Score = 39.3 bits (90), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 78/233 (33%), Gaps = 38/233 (16%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ YN LI + + DLL EM G P +TY ++ CK G A
Sbjct: 543 IEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYF 602
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF--- 412
EM + I + R+G+ D A +MV G P H F+K
Sbjct: 603 EMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFP---DHECFLKSDIRYA 659
Query: 413 ---------------------IFY-----------RYEDAYKYVVLSADKYKSSSNMLYS 440
I Y + +DA ++ + + K N Y
Sbjct: 660 AIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYC 719
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCL 493
L + N A + EM++ GL PN+ Y ++ L S A+ L
Sbjct: 720 TLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRL 772
>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 825
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 73/158 (46%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+M + G P YN ++ LCK G+ LL EML RN PD + I R G
Sbjct: 440 KMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNG 499
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
+ D A F ++++G+ P + + A IKG+ F + DA + + + YS
Sbjct: 500 ELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYS 559
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ + K ++ A + +MMK+ +PNV Y ++
Sbjct: 560 TVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLI 597
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 85/219 (38%), Gaps = 37/219 (16%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y LI C+ +F+ LL EM G +N V+ K G +A E+L
Sbjct: 275 VETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLR 334
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPR--------------- 400
M C PD TY I I +SC+ G+ + A + +RGL P
Sbjct: 335 RMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKG 394
Query: 401 --------------------LATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYS 440
L ++ AFI G + + A +K +Y+
Sbjct: 395 DYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYN 454
Query: 441 LLAS-LHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+L S L K P M K +LSEM+ ++P+V V+ ++
Sbjct: 455 ILMSGLCKKGRIPAM-KLLLSEMLDRNVQPDVYVFATLI 492
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 110/256 (42%), Gaps = 22/256 (8%)
Query: 233 FGFLPVLISSKALTKKG--------IWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEM 284
F + P++ A KKG ++R+ E+ + S LVS A I V G ++
Sbjct: 381 FSYTPLM---HAYCKKGDYVKASGMLFRIAEIGEK---SDLVS-YGAFIHGVVVAGEIDV 433
Query: 285 AKYVIKKTERKVSY-----YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLG 339
A V +K K + YNIL+ +C++ + LL EM +P + ++
Sbjct: 434 ALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLID 493
Query: 340 VLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
+NG+ +A ++ + ++ + P + Y I C+ GK A + N+M P
Sbjct: 494 GFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAP 553
Query: 400 RLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNV 458
T++ I GY + A K + K+K N++ Y+ L + K + + A+ V
Sbjct: 554 DEYTYSTVIDGYVKQHDMSSALK-MFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKV 612
Query: 459 LSEMMKNGLRPNVSVY 474
S M L PNV Y
Sbjct: 613 FSGMKSFDLVPNVVTY 628
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 66/164 (40%), Gaps = 16/164 (9%)
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
G +P + YN ++ CK G+ DA L EM + PD TY I + A
Sbjct: 515 GVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSA 574
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN--------M 437
F QM+K +P + T+ + I G+ K ++ A+K S +
Sbjct: 575 LKMFGQMMKHKFKPNVITYTSLINGF--------CKKADMIRAEKVFSGMKSFDLVPNVV 626
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y+ L K P A ++ M+ NG PN + + ++ L
Sbjct: 627 TYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLINGL 670
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 66/171 (38%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
+I++K +C + R L+ C P + YN ++ CK G A L E+
Sbjct: 209 SIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNELKM 268
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
+ P TY I C+ G+F+ +M RGL + I + + +
Sbjct: 269 KGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTE 328
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPN 470
A + + A+ Y+++ + K A +L + + GL PN
Sbjct: 329 AAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPN 379
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 1/128 (0%)
Query: 286 KYVIKK-TERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKN 344
K +I+K + + YN +IK C+ L EM V P TY+ V+ K
Sbjct: 509 KVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQ 568
Query: 345 GQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATH 404
+ A ++ +M+ P+ ITY I C+ A F+ M L P + T+
Sbjct: 569 HDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTY 628
Query: 405 AAFIKGYF 412
+ G+F
Sbjct: 629 TTLVGGFF 636
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 75/157 (47%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
+L E G +T+N V+ LCK G+ A+A ELL+ M C PD++TY
Sbjct: 485 NLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGY 544
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
C++G+ A + N+M G P + +FI G+FI ++ + + S +
Sbjct: 545 CKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNL 604
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
+ Y L + K N A N+ EM+ NG+ PNV +
Sbjct: 605 VTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFI 641
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 97/236 (41%), Gaps = 6/236 (2%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSY------YNILIKE 305
R++E L + G S V L++ + G E A+ V+K+ + Y ++I
Sbjct: 274 RILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMING 333
Query: 306 MCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPD 365
C+R + EMR G YN ++ LCK G+ + ++L+EM PD
Sbjct: 334 YCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPD 393
Query: 366 AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV 425
+Y I CR G AF MV+ GL T+ +KG+ + +DA +
Sbjct: 394 KYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWF 453
Query: 426 LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
L + + + + S L K A N+ E + GL NV + V+ L
Sbjct: 454 LMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGL 509
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C+ +L +++ G P +TYN ++ CK G+ +A +L ++M+
Sbjct: 773 YNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMV 832
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
P ITY I I C G + A +QM++ + P T+ I GY
Sbjct: 833 EEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYI 886
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 72/164 (43%), Gaps = 4/164 (2%)
Query: 310 CDFKGPRDLLVEMRQV----GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPD 365
C G D +R V G P +TYN ++ LCK+G+ + A L ++ + P+
Sbjct: 745 CAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPN 804
Query: 366 AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV 425
ITY I C+ GK AF +MV+ G+QP + T++ I G E+A K +
Sbjct: 805 GITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLD 864
Query: 426 LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
+ + + Y L + K+ N + EM GL P
Sbjct: 865 QMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 908
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 69/154 (44%), Gaps = 2/154 (1%)
Query: 258 NQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRD 317
N++ S L+ G+ + L L++ + + + + V +N +I +C+ +
Sbjct: 463 NEISCSTLLDGLFKAGKTEQALNLWK--ETLARGLAKNVITFNTVINGLCKIGRMAEAEE 520
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
LL M+++ C P +LTY + CK GQ A L+ +M P + FI
Sbjct: 521 LLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHF 580
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
++ + ++M RGL P L T+ A I G+
Sbjct: 581 IAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGW 614
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 9/166 (5%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+MR G P T + C++G+ A A E +EEM G + + Y + C +G
Sbjct: 208 QMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMG 267
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML-- 438
+ A + ++GL P + T+ +KGY R E+A + V + K + +++
Sbjct: 268 WTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVV----KEMKETGDIVVD 323
Query: 439 ---YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y ++ + + + A V +EM G+ N+ VY ++ L
Sbjct: 324 EVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGL 369
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 75/176 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N++I +C+ + L +R P TY+ ++ +G +A L + ML
Sbjct: 703 WNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVML 762
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ ITY I C+ GK A N FN++ +G+ P T+ I Y +
Sbjct: 763 SAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTT 822
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+A+K ++ + + YS+L A +L +M++N + PN Y
Sbjct: 823 EAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITY 878
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI E C+ L +M + G +P +TY+ ++ LC G +A +LL++M+
Sbjct: 808 YNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMI 867
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
N P+ ITY I + G + +++M RGL P
Sbjct: 868 ENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 908
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 70/168 (41%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+++L++ ++ M +VGC P + N +L L ++G A + +M
Sbjct: 151 FDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMR 210
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD T I CR G+ A F +M GL+ L + A + Y E
Sbjct: 211 IAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTE 270
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNG 466
DA + + K S + + Y+LL + K+ A+ V+ EM + G
Sbjct: 271 DARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETG 318
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 74/179 (41%), Gaps = 1/179 (0%)
Query: 301 ILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGR 360
I+ K CR + + EM +G E + Y+ V+ C G DA +LE + +
Sbjct: 223 IMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRK 282
Query: 361 NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG-LQPRLATHAAFIKGYFIFYRYED 419
P+ +TY + + C+ G+ + A +M + G + + I GY R +D
Sbjct: 283 GLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDD 342
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + D + +Y+ + + K + VL EM G+RP+ Y ++
Sbjct: 343 ATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLI 401
>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 83/194 (42%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
+ILIK C+ L V++ ++G EP LTY+ ++ CK+G D L E+M+
Sbjct: 416 SILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIK 475
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
+ C PD I Y + I C+ G A FF Q V RGL P + T + +
Sbjct: 476 KRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVG 535
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
A K L + + Y++L + A + +M+K +P+V Y ++
Sbjct: 536 AMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLID 595
Query: 480 HLHTSHQEHMAKCL 493
L + C+
Sbjct: 596 GLCKLKKSSAGLCI 609
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 60/117 (51%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
++ YN+LI R + L V + + G +P T+N ++ C + DA +L
Sbjct: 622 IAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFA 681
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+M P+AIT+ I I CR G+ D A F++M++ G +P L T++ I GYF
Sbjct: 682 KMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYF 738
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/221 (19%), Positives = 83/221 (37%), Gaps = 35/221 (15%)
Query: 293 ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACE 352
E + Y+ LI C+ + + L +M + CEP T+ Y+ ++ LCK G DA
Sbjct: 444 EPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALR 503
Query: 353 LLEEMLGRNCHP-----------------------------------DAITYEIFIVYSC 377
+ + R P D +TY I I +
Sbjct: 504 FFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAA 563
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ G+ D A F QM+K+ +P + T+ I G + +
Sbjct: 564 QFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIA 623
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+Y++L ++H + + A + +++ G +P+V + ++
Sbjct: 624 IYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMI 664
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 72/176 (40%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y ILIK + L +M + +P +TY ++ LCK + + + + M
Sbjct: 555 YTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMC 614
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD Y + I R G + A F +V+RG +P + T I Y F R +
Sbjct: 615 KNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLD 674
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
DA + + + + +++L + A + S+M++ G PN+ Y
Sbjct: 675 DAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTY 730
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 48/108 (44%)
Query: 364 PDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKY 423
P+ +T+ I C+ G D AF F+ M G+ P L ++ I G F R ED +
Sbjct: 305 PNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRL 364
Query: 424 VVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNV 471
++++ DK + +S + K + + M+ G+ PNV
Sbjct: 365 LLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNV 412
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 1/114 (0%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL-GVLCKNGQDADACELLEEM 357
+ ILI CR + +M + G EP +TY+ ++ G +L EM
Sbjct: 695 FTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEM 754
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
L N P+ ++Y I I C+ G A F + + L P + + I+GY
Sbjct: 755 LENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGY 808
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 72/186 (38%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V ++ LI C+ + L M G P + Y+ ++ L K G+ D LL
Sbjct: 307 VVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLL 366
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
L + D + + + ++G + +M+ G+ P + + + IKG+
Sbjct: 367 VALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNG 426
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R +A V S + YS L + K+ N + +M+K P+ VY
Sbjct: 427 RILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYS 486
Query: 476 RVLKHL 481
++ L
Sbjct: 487 VLINGL 492
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
EM + P ++Y+ ++ LCK G +A L ++ PD I Y I I C+VG
Sbjct: 753 EMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVG 812
Query: 381 KFDVAFNFFNQMVKRGLQP 399
+ A ++ M+ L P
Sbjct: 813 RLTEAMMLYDNMLLNRLTP 831
>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 874
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 74/152 (48%)
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
C P +TY+ +L LCK G+ A+A L EM+G PD++ Y IFI + C+ GK AF
Sbjct: 520 CLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAF 579
Query: 387 NFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLH 446
M K+G L T+ + I G I + + + + +K S + Y+
Sbjct: 580 RVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYL 639
Query: 447 DKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ A N+L EMM+ + PNV ++ ++
Sbjct: 640 CEGGKVEDATNLLDEMMQKNIAPNVFSFKYLI 671
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 59/127 (46%), Gaps = 5/127 (3%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
I F G A V+K E+K + YN LI + + L+ EMR+ G
Sbjct: 565 FIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKG 624
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
P TYN + LC+ G+ DA LL+EM+ +N P+ +++ I C+V FD+A
Sbjct: 625 ISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQ 684
Query: 387 NFFNQMV 393
F V
Sbjct: 685 EVFETAV 691
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 5/137 (3%)
Query: 272 LIEMFSVLGLYEMAKYV---IKKTERKVSY--YNILIKEMCRRCDFKGPRDLLVEMRQVG 326
+++ F +GL E AK + I++ + VS YNI ++ + R F +L +M G
Sbjct: 297 MLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKG 356
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
P +YN ++ LCK G +DA ++ M PDA+TY + C VGK D A
Sbjct: 357 IGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAK 416
Query: 387 NFFNQMVKRGLQPRLAT 403
+ +M++ P T
Sbjct: 417 SLLQEMMRNNCLPNAYT 433
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 48/105 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N+LI+ +C R+L EM + GC+P T+ ++ CK G ELL M
Sbjct: 150 FNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSME 209
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
P+ + Y + CR G+ D + +M + GL P + T
Sbjct: 210 SFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVT 254
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 3/184 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYN-YVLGVLCKNGQDADACELLEEM 357
YNI I C++ +L +M + GC TYN +LG+ KN Q + L++EM
Sbjct: 562 YNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKN-QIFEIHGLMDEM 620
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
+ P+ TY I Y C GK + A N ++M+++ + P + + I G F
Sbjct: 621 REKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLI-GAFCKVPD 679
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
D + V +A LYSL+ + + A +L ++ G +Y+ +
Sbjct: 680 FDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDL 739
Query: 478 LKHL 481
+ L
Sbjct: 740 VVSL 743
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 54/126 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+L++ R + L +M G P T T+N ++ LC + A EL +EM
Sbjct: 115 YNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARELFDEMP 174
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ C P+ T+ I + C+ G D N M G+ P + + + R +
Sbjct: 175 EKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRND 234
Query: 419 DAYKYV 424
D+ K V
Sbjct: 235 DSEKLV 240
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 60/143 (41%)
Query: 329 PITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF 388
P ++TYN +L CK G DA L E + + +Y I++ R GKF A
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETV 348
Query: 389 FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDK 448
QM+ +G+ P + ++ + G DA V L S + Y L +
Sbjct: 349 LKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCS 408
Query: 449 NNNPVMAKNVLSEMMKNGLRPNV 471
AK++L EMM+N PN
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNA 431
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YNIL+ +C+ + ++ M++ G P +TY +L C G+ A LL+EM+
Sbjct: 364 YNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMM 423
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
NC P+A T I + +G+ A +M ++G
Sbjct: 424 RNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKG 461
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 52/113 (46%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN+++K C+ + + L +R+ +YN L L ++G+ +A +L++M+
Sbjct: 294 YNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMI 353
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
+ P +Y I + C++G A M + G+ P T+ + GY
Sbjct: 354 DKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGY 406
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 90/244 (36%), Gaps = 30/244 (12%)
Query: 272 LIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDFKGPRDLLVEMRQVG 326
L++ LG+ AK ++ +R Y L+ C + LL EM +
Sbjct: 367 LMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNN 426
Query: 327 CEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAF 386
C P T N +L L G+ ++A ELL +M + D +T I + C G+ D A
Sbjct: 427 CLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAI 486
Query: 387 NFFNQM-----------------------VKRGLQPRLATHAAFIKGYFIFYRYEDAYK- 422
M ++ P L T++ + G R+ +A
Sbjct: 487 EIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTL 546
Query: 423 YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLH 482
+ + +K + S + Y++ K A VL +M K G ++ Y ++ L
Sbjct: 547 FAEMMGEKLQPDS-LAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLG 605
Query: 483 TSHQ 486
+Q
Sbjct: 606 IKNQ 609
>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
Length = 866
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVG-----------------------CEPITLTYNY 336
NI+I +CR D++ M + G C P +TY+
Sbjct: 460 NIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSI 519
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
++ LCK G+ +A + L EM+ ++ PD++ Y+ FI C+ GK +A M K+G
Sbjct: 520 LISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKG 579
Query: 397 LQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAK 456
P T+ I+G+ ++ E+ K + +K S + M Y+ L + A
Sbjct: 580 CNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAM 639
Query: 457 NVLSEMMKNGLRPNVSVYRRVLK 479
+L EM++N L PN++ + ++K
Sbjct: 640 PLLDEMLQNELVPNITSFDLLIK 662
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 89/242 (36%), Gaps = 58/242 (23%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y L+ C + + +L EM Q GC P + TYN +L L + G+ +A LLE
Sbjct: 386 VVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLE 445
Query: 356 EM------------------------------------------LGR------------- 360
M LGR
Sbjct: 446 RMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSS 505
Query: 361 ---NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRY 417
C PD ITY I I C+ G+FD A +M+ + + P + FI GY +
Sbjct: 506 ISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKT 565
Query: 418 EDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
A K + K + S Y+LL ++ + ++SEM + G+ PNV Y +
Sbjct: 566 SLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSL 625
Query: 478 LK 479
+K
Sbjct: 626 IK 627
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 58/131 (44%)
Query: 294 RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACEL 353
R+V YN + + R ++LL EM G +P + TYN ++ LCK G+ DA +
Sbjct: 314 RRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRV 373
Query: 354 LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
+ PD +TY + C G A ++M ++G P T+ ++ +
Sbjct: 374 ENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWR 433
Query: 414 FYRYEDAYKYV 424
R +A + +
Sbjct: 434 AGRTTEAERLL 444
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 76/177 (42%), Gaps = 1/177 (0%)
Query: 283 EMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLC 342
++ + ++K Y+ I C+ +L +M + GC P T TYN ++
Sbjct: 536 KLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFE 595
Query: 343 KNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLA 402
+ + + +L+ EM + P+ +TY I C+ G + A ++M++ L P +
Sbjct: 596 EKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNIT 655
Query: 403 THAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVL 459
+ IK Y + A + V +A + +LY L+ + + AKN+L
Sbjct: 656 SFDLLIKAYCKITDFPSA-QMVFDAALRTCGQKEVLYCLMCTELTTYGKWIEAKNIL 711
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 87/242 (35%), Gaps = 51/242 (21%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N ++ C+ + L+ MR G P +T+N + LCK G+ DA + ++M
Sbjct: 211 NTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQE 270
Query: 360 RNCH----PDAITYEIFIVYSC-----------------------------------RVG 380
H PD +T+++ + C R G
Sbjct: 271 DWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNG 330
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGY------FIFYRYEDAYKYVVLSADKYKSS 434
+ A +M G+QP T+ + G F R E+ + V+S D
Sbjct: 331 RVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDV---- 386
Query: 435 SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLS 494
+ Y+ L + N A +L EM + G PN Y +L+ L + + A+ L
Sbjct: 387 --VTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLL 444
Query: 495 SR 496
R
Sbjct: 445 ER 446
>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Cucumis sativus]
Length = 799
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 76/179 (42%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N LI +C ++ EM + G +TYN ++ C G+ L EEM
Sbjct: 469 NALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTK 528
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
R PD TY + C VGK D A +++ GL + T+ ++GY R ED
Sbjct: 529 RGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIED 588
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
K ++++Y+++ H +N N A +L M G+ PN + Y ++
Sbjct: 589 VENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLI 647
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 84/172 (48%), Gaps = 3/172 (1%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
S+ N+ I +C+ + +L ++M ++G P +TYN ++ LC+NG+ +A EL E+
Sbjct: 222 SFTNV-INALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEK 280
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
M + P+ TY I ++ FD + ++M+ G P + I GY
Sbjct: 281 MTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGN 340
Query: 417 YEDAYKYV-VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
E A K V+ + +S LYSL+ K++ A+N L E++ +GL
Sbjct: 341 IEGALKIKDVMISKNITPTSVTLYSLMQGFC-KSDQIEHAENALEEILSSGL 391
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 81/179 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ Y I+++ C+ + +L E+ E ++ YN ++ C+NG A A +LLE
Sbjct: 570 IHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLE 629
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M + P+ TY I C +G + A + ++M K G P + + A I GY
Sbjct: 630 NMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLG 689
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + A + + Y+++ + K N A N+L +M ++G+ P+V Y
Sbjct: 690 QMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTY 748
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 88/183 (48%), Gaps = 8/183 (4%)
Query: 301 ILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGR 360
+L+ +C+ +L + + G +T N ++ LC G+ +A +++EML R
Sbjct: 435 MLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLER 494
Query: 361 NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
D ITY I+ C GK + F +M KRG+QP + T+ ++G + +DA
Sbjct: 495 GLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDA 554
Query: 421 YKYVVLSADKYKSS---SNM-LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
K D++K+S SN+ Y ++ + K N +N+ +E++ + N VY
Sbjct: 555 IKL----WDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNI 610
Query: 477 VLK 479
++K
Sbjct: 611 IIK 613
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 77/178 (43%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
KK E YNI+IK C+ + LL M+ G P TY+ ++ +C G D
Sbjct: 599 KKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVED 658
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A L++EM P+ + Y I C++G+ D A + + +M+ + P T+ I
Sbjct: 659 AKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMID 718
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
GY E A ++ + + Y++L + K N+ A V +M GL
Sbjct: 719 GYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGL 776
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 115/288 (39%), Gaps = 68/288 (23%)
Query: 210 DYETMRQLLNDFNVYQVCLNEKAFGFLPVL-ISSKALTKKGIWRVVEVLNQVGGSCLVSG 268
++ T+R +L++F++ + + +G LPVL + S+ +E+ N + G V G
Sbjct: 94 NFFTLRLILSNFDLPSILI---VYGNLPVLNLDSEKFH-------IEIANALFGLTSVVG 143
Query: 269 VRALIEMFSVL------------------GLYEMAKYVIKKTERKVSYYNILIKEMCRRC 310
+ F +L Y +A+ K T + N + + +
Sbjct: 144 RFEWTQAFDLLIHVYSTQFRNLGFSCAVDVFYLLAR---KGTFPSLKTCNFXLSSLVKAN 200
Query: 311 DFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYE 370
+F+ ++ M + C P ++ V+ LCK G+ +A EL +M P+ +TY
Sbjct: 201 EFEKCCEVFRVMSEGAC-PDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYN 259
Query: 371 IFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADK 430
I C+ G+ D AF +M +G+QP L T+ A I G
Sbjct: 260 CIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGL------------------- 300
Query: 431 YKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ + DK N ++L EM+ G PNV V+ ++
Sbjct: 301 ----------IKLNFFDKVN------HILDEMIGAGFNPNVVVFNNLI 332
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 8/204 (3%)
Query: 281 LYEMAKYVIKKTERKVSY----YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNY 336
L E ++ V + ER + YN LI C +G L EM + G +P TYN+
Sbjct: 481 LPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNF 540
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
+L LC G+ DA +L +E + TY I + C+ + + N FN+++ +
Sbjct: 541 LLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKK 600
Query: 397 LQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM-- 454
++ + IK + A + + K + YS L +H N ++
Sbjct: 601 MELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSL--IHGVCNIGLVED 658
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVL 478
AK+++ EM K G PNV Y ++
Sbjct: 659 AKHLIDEMRKEGFVPNVVCYTALI 682
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 58/146 (39%), Gaps = 5/146 (3%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
+LI +GL E AK++I + ++ V Y LI C+ +EM
Sbjct: 645 SLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISF 704
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
P TY ++ CK G A LL +M PD +TY + C+ D A
Sbjct: 705 NIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNA 764
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGY 411
F +QM GL T+ + G+
Sbjct: 765 FKVCDQMATEGLPVDEITYTTLVHGW 790
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 95/224 (42%), Gaps = 3/224 (1%)
Query: 265 LVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQ 324
L+ G+ + + LGLY+ +++ YN LI RR + L+ +M
Sbjct: 518 LIFGLCKVNKFEEALGLYQ--DMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLF 575
Query: 325 VGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDV 384
GC +TYN ++ LC+ G L E+M+ + +P+ I+ I I CR G
Sbjct: 576 RGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQH 635
Query: 385 AFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLAS 444
A F M+ RGL P + T+ + I G R ++A + + Y+ L S
Sbjct: 636 ALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLIS 695
Query: 445 LHDKNNNPVMAKNVLSEMMKNGLRPN-VSVYRRVLKHLHTSHQE 487
H K A +LS + +G PN V+ Y V + QE
Sbjct: 696 WHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 739
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 79/187 (42%)
Query: 284 MAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCK 343
M + IK E V Y ILI C+ + R++L EM G + YN ++ LCK
Sbjct: 430 MNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCK 489
Query: 344 NGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
+ + DA + +M + C PD T+ I C+V KF+ A + M+ G+ T
Sbjct: 490 DEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTIT 549
Query: 404 HAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMM 463
+ I + ++A K V + ++ Y+ L + N + +MM
Sbjct: 550 YNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMM 609
Query: 464 KNGLRPN 470
GL PN
Sbjct: 610 SKGLNPN 616
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 63/122 (51%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C++ R+L+ EM+ GCEP +TY ++ CK G+ +A +L+EM
Sbjct: 410 YNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMS 469
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
G+ +A+ Y I C+ K A N F M +G +P + T + I G ++E
Sbjct: 470 GKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFE 529
Query: 419 DA 420
+A
Sbjct: 530 EA 531
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 60/121 (49%), Gaps = 2/121 (1%)
Query: 279 LGLYEMAKYVIKKTER-KVSYYNILIKEMCRRCDFKGPRDLLVE-MRQVGCEPITLTYNY 336
+G + A+ ++ K V +N LI R + ++ E M VGC P TYN
Sbjct: 353 MGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNT 412
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
++ LCK G A EL+ EM + C P+ ITY I I C+ G+ + A N ++M +G
Sbjct: 413 LILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKG 472
Query: 397 L 397
L
Sbjct: 473 L 473
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 8/201 (3%)
Query: 282 YEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
YEM I T V + +++K +C + LL +M + GC P + Y ++ L
Sbjct: 224 YEMLSKGISPT---VYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHAL 280
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
K G+ + +LLEEML C PD T+ I C++ + A ++M+ RG P
Sbjct: 281 SKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNS 340
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
T+ + G + ++A + +K + + +L++ L + + AK V+ E
Sbjct: 341 FTYGVLMHGLCRMGKVDEARMLL----NKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHE 396
Query: 462 -MMKNGLRPNVSVYRRVLKHL 481
M+ G P++ Y ++ L
Sbjct: 397 SMLSVGCGPDIFTYNTLILGL 417
>gi|224065693|ref|XP_002301924.1| predicted protein [Populus trichocarpa]
gi|222843650|gb|EEE81197.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 125/302 (41%), Gaps = 24/302 (7%)
Query: 194 NSDICSLVIDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIW-R 252
N SL+ID G + +E+ R +L + V N A+ F +L S + KG W +
Sbjct: 375 NEQTYSLLIDAYGNAERWESARIVLKEMEASNVQPN--AYVFSRILASYR---DKGEWQK 429
Query: 253 VVEVLNQVGGSCLVSGVR-------ALIEMFSVLGLYEMA-----KYVIKKTERKVSYYN 300
+VL ++ S GVR LI+ F + A + + + E +N
Sbjct: 430 TFQVLREMEDS----GVRPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWN 485
Query: 301 ILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGR 360
L+ C+ +L EM + G P T+N ++ + D LL M +
Sbjct: 486 TLVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNIMINSFGDQERWDDVKNLLTNMRSQ 545
Query: 361 NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
P+A+TY I + G+FD A + M GL+P + A + Y + A
Sbjct: 546 GLLPNAVTYTTLIDIYGKSGRFDDAIECLDDMKAAGLKPSSTMYNALLNAYAQRGLSDQA 605
Query: 421 Y-KYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLK 479
+ + D K S L SL+ + K+ V A VL M +N L+P+V Y ++K
Sbjct: 606 VSAFWAMRDDGLKPSLLALNSLINAF-GKDRRDVEAFVVLQYMKENDLKPDVVTYTTLMK 664
Query: 480 HL 481
L
Sbjct: 665 AL 666
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 121/286 (42%), Gaps = 17/286 (5%)
Query: 202 IDNCGRLDDYETMRQLLNDFNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVE-VLNQV 260
+ NCGR ++ E + + + D L + + +L + K G+ R E V++++
Sbjct: 316 LGNCGRTEEAEAIFEEMRDNG-----LQPRTRAYNALL---RGYVKAGLLRDAEFVVSEM 367
Query: 261 GGSCLVSGVRA---LIEMFSVLGLYEMAKYVIKKTER-----KVSYYNILIKEMCRRCDF 312
S ++ + LI+ + +E A+ V+K+ E ++ ++ + ++
Sbjct: 368 ERSGVLPNEQTYSLLIDAYGNAERWESARIVLKEMEASNVQPNAYVFSRILASYRDKGEW 427
Query: 313 KGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIF 372
+ +L EM G P + YN ++ K A + ML PD IT+
Sbjct: 428 QKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNTL 487
Query: 373 IVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYK 432
+ C+ GK D A F +M+++G P T I + R++D + +
Sbjct: 488 VDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNIMINSFGDQERWDDVKNLLTNMRSQGL 547
Query: 433 SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ + Y+ L ++ K+ A L +M GL+P+ ++Y +L
Sbjct: 548 LPNAVTYTTLIDIYGKSGRFDDAIECLDDMKAAGLKPSSTMYNALL 593
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 81/218 (37%), Gaps = 39/218 (17%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADAC--ELLEE 356
YN LI R D + +L+ MR+ G + Y+ ++ L KN + + ++ E
Sbjct: 202 YNALISACARNNDIEKALNLICRMREDGYPSDLVNYSLIIRSLMKNNRANSSILQKIYRE 261
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNF---------------------------- 388
+ D + IV + G D A F
Sbjct: 262 IDRDKLEVDVQLWNDIIVGFAKAGDLDKALEFLGVVQGSGLSVKTATLVTVIWGLGNCGR 321
Query: 389 -------FNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN-MLYS 440
F +M GLQPR + A ++GY DA ++VV ++ N YS
Sbjct: 322 TEEAEAIFEEMRDNGLQPRTRAYNALLRGYVKAGLLRDA-EFVVSEMERSGVLPNEQTYS 380
Query: 441 LLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
LL + A+ VL EM + ++PN V+ R+L
Sbjct: 381 LLIDAYGNAERWESARIVLKEMEASNVQPNAYVFSRIL 418
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 44/103 (42%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
+ YN L+ +R MR G +P L N ++ K+ +D +A +L+
Sbjct: 587 TMYNALLNAYAQRGLSDQAVSAFWAMRDDGLKPSLLALNSLINAFGKDRRDVEAFVVLQY 646
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
M + PD +TY + V KFD + + +M+ G P
Sbjct: 647 MKENDLKPDVVTYTTLMKALILVEKFDKVPSVYEEMILSGCTP 689
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 110/245 (44%), Gaps = 10/245 (4%)
Query: 239 LISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSY 298
L+ +K + K+ VV G C V A E+ L+EM K E +
Sbjct: 446 LVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANEL-----LHEMCS---KGLELNIFT 497
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C+ + + +++M + G +P TY ++G LC++ + A LL+EML
Sbjct: 498 YNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEML 557
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P +TY + + C G+ + M+++ + P T+ + +K Y I +
Sbjct: 558 DKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMK 617
Query: 419 DAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ Y + + + + N Y++L H K N A SEM++ G R S Y +
Sbjct: 618 STTEIYKGMLSQEVVPNENT-YNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNAL 676
Query: 478 LKHLH 482
++ L+
Sbjct: 677 IRLLN 681
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 81/179 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y I++ C + + LL EM G E + Y V+ +LC GQ +DA ++E
Sbjct: 285 VVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVE 344
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M+ DA + + CR G A N+F++M KRGL T+ A I G
Sbjct: 345 DMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAG 404
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
++A + + DK + Y++L + K A V ++M++ + PNV Y
Sbjct: 405 ELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTY 463
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 90/198 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ + ++ CR+ D R+ EM++ G +TY ++ LC+ G+ +A +L+
Sbjct: 355 AAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQ 414
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM + DA+TY + I C+VGK AF N+MV++ + P + T+ A G
Sbjct: 415 EMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQG 474
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
A + + K + Y+ L + K N A + +M + GL+P+V Y
Sbjct: 475 DVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYT 534
Query: 476 RVLKHLHTSHQEHMAKCL 493
++ L S + A L
Sbjct: 535 TIIGALCQSKELDRAHSL 552
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 74/179 (41%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y +I +C+ + LL EM G +P +TYN ++ C +G+ LLE
Sbjct: 530 VYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLE 589
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
ML +N HP+ TY + C + M+ + + P T+ IKG+
Sbjct: 590 WMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKAR 649
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
++A + +K + Y+ L L +K A+ + +M K+ L VY
Sbjct: 650 NMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVY 708
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 3/167 (1%)
Query: 315 PRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIV 374
P D V++ Q E T +YN +L LC G+ DA +L +EM PD +TY I +
Sbjct: 237 PLDEAVQLFQELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVH 293
Query: 375 YSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSS 434
C + + + A ++M RGL+ + + I + DA + V
Sbjct: 294 GYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVL 353
Query: 435 SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+++ + S + + A+N EM K GL + Y ++ L
Sbjct: 354 DAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGL 400
>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 76/179 (42%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N LI +C ++ EM + G +TYN ++ C G+ L EEM
Sbjct: 492 NALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTK 551
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
R PD TY + C VGK D A +++ GL + T+ ++GY R ED
Sbjct: 552 RGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIED 611
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
K ++++Y+++ H +N N A +L M G+ PN + Y ++
Sbjct: 612 VENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLI 670
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 84/172 (48%), Gaps = 3/172 (1%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
S+ N+ I +C+ + +L ++M ++G P +TYN ++ LC+NG+ +A EL E+
Sbjct: 245 SFTNV-INALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEK 303
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
M + P+ TY I ++ FD + ++M+ G P + I GY
Sbjct: 304 MTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGN 363
Query: 417 YEDAYKYV-VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
E A K V+ + +S LYSL+ K++ A+N L E++ +GL
Sbjct: 364 IEGALKIKDVMISKNITPTSVTLYSLMQGFC-KSDQIEHAENALEEILSSGL 414
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 81/179 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ Y I+++ C+ + +L E+ E ++ YN ++ C+NG A A +LLE
Sbjct: 593 IHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLE 652
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M + P+ TY I C +G + A + ++M K G P + + A I GY
Sbjct: 653 NMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLG 712
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+ + A + + Y+++ + K N A N+L +M ++G+ P+V Y
Sbjct: 713 QMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTY 771
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 88/183 (48%), Gaps = 8/183 (4%)
Query: 301 ILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGR 360
+L+ +C+ +L + + G +T N ++ LC G+ +A +++EML R
Sbjct: 458 MLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLER 517
Query: 361 NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDA 420
D ITY I+ C GK + F +M KRG+QP + T+ ++G + +DA
Sbjct: 518 GLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDA 577
Query: 421 YKYVVLSADKYKSS---SNM-LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
K D++K+S SN+ Y ++ + K N +N+ +E++ + N VY
Sbjct: 578 IKL----WDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNI 633
Query: 477 VLK 479
++K
Sbjct: 634 IIK 636
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 77/178 (43%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
KK E YNI+IK C+ + LL M+ G P TY+ ++ +C G D
Sbjct: 622 KKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVED 681
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIK 409
A L++EM P+ + Y I C++G+ D A + + +M+ + P T+ I
Sbjct: 682 AKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMID 741
Query: 410 GYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGL 467
GY E A ++ + + Y++L + K N+ A V +M GL
Sbjct: 742 GYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGL 799
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 75/179 (41%), Gaps = 36/179 (20%)
Query: 300 NILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLG 359
N L+ + + +F+ ++ M + C P ++ V+ LCK G+ +A EL +M
Sbjct: 213 NFLLSSLVKANEFEKCCEVFRVMSEGAC-PDVFSFTNVINALCKGGKMENAIELFMKMEK 271
Query: 360 RNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYED 419
P+ +TY I C+ G+ D AF +M +G+QP L T+ A I G
Sbjct: 272 LGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGL-------- 323
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+ + DK N +VL EM+ +G PNV V+ ++
Sbjct: 324 ---------------------IKLNFFDKVN------HVLDEMIGSGFNPNVVVFNNLI 355
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 8/204 (3%)
Query: 281 LYEMAKYVIKKTERKVSY----YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNY 336
L E ++ V + ER + YN LI C +G L EM + G +P TYN+
Sbjct: 504 LPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNF 563
Query: 337 VLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG 396
+L LC G+ DA +L +E + TY I + C+ + + N FN+++ +
Sbjct: 564 LLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKK 623
Query: 397 LQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM-- 454
++ + IK + A + + K + YS L +H N ++
Sbjct: 624 MELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSL--IHGVCNIGLVED 681
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVL 478
AK+++ EM K G PNV Y ++
Sbjct: 682 AKHLIDEMRKEGFVPNVVCYTALI 705
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 58/146 (39%), Gaps = 5/146 (3%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
+LI +GL E AK++I + ++ V Y LI C+ +EM
Sbjct: 668 SLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISF 727
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVA 385
P TY ++ CK G A LL +M PD +TY + C+ D A
Sbjct: 728 NIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNA 787
Query: 386 FNFFNQMVKRGLQPRLATHAAFIKGY 411
F +QM GL T+ + G+
Sbjct: 788 FKVCDQMATEGLPVDEITYTTLVHGW 813
Score = 38.5 bits (88), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 9/136 (6%)
Query: 271 ALIEMFSVLGLYEMAKYVIKKT-----ERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQV 325
ALI L ++ +V+ + V +N LI C+ + +G + M
Sbjct: 318 ALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISK 377
Query: 326 GCEPITLTYNYVLGVLCKNGQDADACELLEEML--GRNCHPDAITYEIFIVYSCRVGKFD 383
P ++T ++ CK+ Q A LEE+L G + HPD Y + + + C+ ++
Sbjct: 378 NITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDN-CYSV-VHWLCKKFRYH 435
Query: 384 VAFNFFNQMVKRGLQP 399
AF F M+ R +P
Sbjct: 436 SAFRFTKMMLSRNFRP 451
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 110/245 (44%), Gaps = 10/245 (4%)
Query: 239 LISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSY 298
L+ +K + K+ VV G C V A E+ L+EM K E +
Sbjct: 446 LVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANEL-----LHEMCS---KGLELNIFT 497
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI +C+ + + +++M + G +P TY ++G LC++ + A LL+EML
Sbjct: 498 YNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEML 557
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ P +TY + + C G+ + M+++ + P T+ + +K Y I +
Sbjct: 558 DKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMK 617
Query: 419 DAYK-YVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
+ Y + + + + N Y++L H K N A SEM++ G R S Y +
Sbjct: 618 STTEIYKGMLSQEVVPNENT-YNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNAL 676
Query: 478 LKHLH 482
++ L+
Sbjct: 677 IRLLN 681
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 81/179 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y I++ C + + LL EM G E + Y V+ +LC GQ +DA ++E
Sbjct: 285 VVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVE 344
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
+M+ DA + + CR G A N+F++M KRGL T+ A I G
Sbjct: 345 DMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAG 404
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
++A + + DK + Y++L + K A V ++M++ + PNV Y
Sbjct: 405 ELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTY 463
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 90/198 (45%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ + ++ CR+ D R+ EM++ G +TY ++ LC+ G+ +A +L+
Sbjct: 355 AAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQ 414
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM + DA+TY + I C+VGK AF N+MV++ + P + T+ A G
Sbjct: 415 EMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQG 474
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
A + + K + Y+ L + K N A + +M + GL+P+V Y
Sbjct: 475 DVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYT 534
Query: 476 RVLKHLHTSHQEHMAKCL 493
++ L S + A L
Sbjct: 535 TIIGALCQSKELDRAHSL 552
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 73/179 (40%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y +I +C+ + LL EM G +P +TYN ++ C +G+ LLE
Sbjct: 530 VYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLE 589
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
ML +N HP+ TY + C + M+ + + P T+ IKG+
Sbjct: 590 WMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKAR 649
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
++A + +K + Y+ L L +K A+ + +M K L VY
Sbjct: 650 NMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVY 708
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 3/167 (1%)
Query: 315 PRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIV 374
P D V++ Q E T +YN +L LC G+ DA +L +EM PD +TY I +
Sbjct: 237 PLDEAVQLFQELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVH 293
Query: 375 YSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSS 434
C + + + A ++M RGL+ + + I + DA + V
Sbjct: 294 GYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVL 353
Query: 435 SNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
+++ + S + + A+N EM K GL + Y ++ L
Sbjct: 354 DAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGL 400
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 75/157 (47%)
Query: 317 DLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYS 376
+L E G +T+N V+ LCK G+ A+A ELL+ M C PD++TY
Sbjct: 485 NLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGY 544
Query: 377 CRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSN 436
C++G+ A + N+M G P + +FI G+FI ++ + + S +
Sbjct: 545 CKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNL 604
Query: 437 MLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSV 473
+ Y L + K N A N+ EM+ NG+ PNV +
Sbjct: 605 VTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFI 641
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 97/236 (41%), Gaps = 6/236 (2%)
Query: 252 RVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSY------YNILIKE 305
R++E L + G S V L++ + G E A+ V+K+ + Y ++I
Sbjct: 274 RILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMING 333
Query: 306 MCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPD 365
C+R + EMR G YN ++ LCK G+ + ++L+EM PD
Sbjct: 334 YCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPD 393
Query: 366 AITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVV 425
+Y I CR G AF MV+ GL T+ +KG+ + +DA +
Sbjct: 394 KYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWF 453
Query: 426 LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
L + + + + S L K A N+ E + GL NV + V+ L
Sbjct: 454 LMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGL 509
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 69/154 (44%), Gaps = 2/154 (1%)
Query: 258 NQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRD 317
N++ S L+ G+ + L L++ + + + + V +N +I +C+ +
Sbjct: 463 NEISCSTLLDGLFKAGKTEQALNLWK--ETLARGLAKNVITFNTVINGLCKIGRMAEAEE 520
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
LL M+++ C P +LTY + CK GQ A L+ +M P + FI
Sbjct: 521 LLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHF 580
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGY 411
++ + ++M RGL P L T+ A I G+
Sbjct: 581 IAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGW 614
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 9/166 (5%)
Query: 321 EMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVG 380
+MR G P T + C++G+ A A E +EEM G + + Y + C +G
Sbjct: 208 QMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMG 267
Query: 381 KFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNML-- 438
+ A + ++GL P + T+ +KGY R E+A + V + K + +++
Sbjct: 268 WTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVV----KEMKETGDIVVD 323
Query: 439 ---YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHL 481
Y ++ + + + A V +EM G+ N+ VY ++ L
Sbjct: 324 EVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGL 369
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 55/124 (44%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+N++I +C+ + L +R P TY+ ++ +G +A L + ML
Sbjct: 703 WNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVML 762
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
P+ ITY I C+ GK A N FN++ +G+ P T+ I Y +
Sbjct: 763 SAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTT 822
Query: 419 DAYK 422
+A+K
Sbjct: 823 EAFK 826
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 62/145 (42%)
Query: 322 MRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGK 381
M +VGC P + N +L L ++G A + +M PD T I CR G+
Sbjct: 174 MGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGR 233
Query: 382 FDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSL 441
A F +M GL+ L + A + Y EDA + + K S + + Y+L
Sbjct: 234 VAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTL 293
Query: 442 LASLHDKNNNPVMAKNVLSEMMKNG 466
L + K+ A+ V+ EM + G
Sbjct: 294 LVKGYCKDGRMEEAERVVKEMKETG 318
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 74/179 (41%), Gaps = 1/179 (0%)
Query: 301 ILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGR 360
I+ K CR + + EM +G E + Y+ V+ C G DA +LE + +
Sbjct: 223 IMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRK 282
Query: 361 NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRG-LQPRLATHAAFIKGYFIFYRYED 419
P+ +TY + + C+ G+ + A +M + G + + I GY R +D
Sbjct: 283 GLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDD 342
Query: 420 AYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
A + D + +Y+ + + K + VL EM G+RP+ Y ++
Sbjct: 343 ATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLI 401
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 50/123 (40%), Gaps = 20/123 (16%)
Query: 310 CDFKGPRDLLVEMRQV----GCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPD 365
C G D +R V G P +TYN ++ LCK+G+ + A L ++ + P+
Sbjct: 745 CAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPN 804
Query: 366 AITYEIFIVYSCRVGKFDVAF----------------NFFNQMVKRGLQPRLATHAAFIK 409
ITY I C+ GK AF +QM++ + P T+ I
Sbjct: 805 GITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIH 864
Query: 410 GYF 412
GY
Sbjct: 865 GYI 867
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 16/117 (13%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDA---------- 348
YN LI +C+ +L +++ G P +TYN ++ CK G+
Sbjct: 773 YNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMV 832
Query: 349 ------DACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQP 399
+A +LL++M+ N P+ ITY I + G + +++M RGL P
Sbjct: 833 EEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 889
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 105/234 (44%), Gaps = 7/234 (2%)
Query: 260 VGGSCLVSGV--RALIEMFSVLGLYEMA-KYVIKKTERKVS----YYNILIKEMCRRCDF 312
+G CL++ V + L+ F G E A ++V++ +E S +N L+ CR +
Sbjct: 220 LGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNV 279
Query: 313 KGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIF 372
D++ M + G +P TYN ++ +CK G+ A E+L++M+ R C P+ +TY
Sbjct: 280 NDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTL 339
Query: 373 IVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYK 432
I C+ + + A + +V +GL P + T I+G + + A + +K
Sbjct: 340 ISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGC 399
Query: 433 SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQ 486
YS+L A +L EM +G N VY ++ L S +
Sbjct: 400 KPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRR 453
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 63/131 (48%)
Query: 294 RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACEL 353
R YN LI +C+ + ++ +M +G ++TYN ++ LCKN + +A +L
Sbjct: 436 RNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQL 495
Query: 354 LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
+++M+ PD TY + Y CRVG + A + M G +P + T+ I G
Sbjct: 496 MDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCR 555
Query: 414 FYRYEDAYKYV 424
R + A K +
Sbjct: 556 AGRVDVASKLL 566
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 105/265 (39%), Gaps = 11/265 (4%)
Query: 221 FNVYQVCLNEKAFGFLPVLISSKALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLG 280
F+ QV N GF + + AL +V+ + + G V +LI LG
Sbjct: 259 FSPDQVTFNSLVNGFCRIGNVNDALD------IVDFMIEKGFDPDVYTYNSLISGMCKLG 312
Query: 281 LYEMA-----KYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYN 335
+E A + ++++ YN LI +C+ + + DL + G P T+N
Sbjct: 313 EFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFN 372
Query: 336 YVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKR 395
++ LC + A E+ EEM + C PD TY I I C + A +M
Sbjct: 373 TLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESS 432
Query: 396 GLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMA 455
G + I G R EDA + S S++ Y+ L KN A
Sbjct: 433 GCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEA 492
Query: 456 KNVLSEMMKNGLRPNVSVYRRVLKH 480
++ +M+ GL+P+ Y +L +
Sbjct: 493 SQLMDQMIMEGLKPDKFTYNSLLTY 517
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 126/298 (42%), Gaps = 21/298 (7%)
Query: 211 YETMRQLLNDFNVYQVCLN--EKAFGFLPVL----ISSKALTKKGIWRVVEVLN----QV 260
+ T+ Q +F+ + L E GF P I+ AL + ++VE+L+
Sbjct: 93 FATLIQSFTNFHEIENLLKILENELGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNE 152
Query: 261 GGSCLVSGVRALIEMF--------SVLGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDF 312
G VS LI+ ++L L EMA + +K E + L++ D
Sbjct: 153 GIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDE---ITFTTLMQGFIEEGDL 209
Query: 313 KGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIF 372
G + +M GC ++ ++ CK G+ +A + E+ PD +T+
Sbjct: 210 NGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSL 269
Query: 373 IVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYK 432
+ CR+G + A + + M+++G P + T+ + I G +E A + + +
Sbjct: 270 VNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILREC 329
Query: 433 SSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMA 490
S + + Y+ L S K N A ++ ++ GL P+V + +++ L S + +A
Sbjct: 330 SPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIA 387
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 73/177 (41%), Gaps = 1/177 (0%)
Query: 294 RKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACEL 353
R YN LI +C+ + L+ +M G +P TYN +L C+ G A ++
Sbjct: 471 RSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDI 530
Query: 354 LEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFI 413
++ M C PD TY I CR G+ DVA + +G+ + I+ F+
Sbjct: 531 VQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFM 590
Query: 414 FYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM-AKNVLSEMMKNGLRP 469
R ++ + +K + + ++ P+ A + EM++ G+ P
Sbjct: 591 RKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILP 647
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 12/192 (6%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V +N LI+ +C + ++ EM+ GC+P TY+ ++ LC + +A LL+
Sbjct: 368 VCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLK 427
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM C +A+ Y I C+ + + A F+QM G+ T+ I G
Sbjct: 428 EMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNK 487
Query: 416 RYEDAYKYV------VLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRP 469
R E+A + + L DK+ +S + Y +K A +++ M NG P
Sbjct: 488 RVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEK------AGDIVQTMASNGCEP 541
Query: 470 NVSVYRRVLKHL 481
++ Y ++ L
Sbjct: 542 DIFTYGTLIGGL 553
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 83/184 (45%), Gaps = 2/184 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+ L+ + RR D DLL EM +G P TY + VL + G+ DA +L+ M
Sbjct: 230 YSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTME 289
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C PD +TY + I C GK D A + +M +P L T+ + + + E
Sbjct: 290 DEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLE 349
Query: 419 DAYKYVV-LSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
++ + AD Y + + Y++L K+ A ++L M G+ PN+ Y +
Sbjct: 350 TVKRFWSEMEADGY-APDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTL 408
Query: 478 LKHL 481
+ L
Sbjct: 409 ISGL 412
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 84/186 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
+NI+I + + DL E+ P TY ++G L K G+ +A ++ EEM
Sbjct: 861 HNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMP 920
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
C P+ Y I I + G ++A + F +M+K G++P L ++ ++ F+ R +
Sbjct: 921 DYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVD 980
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
DA Y + Y+L+ + K+ A ++ SEM G+ P + Y ++
Sbjct: 981 DAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALI 1040
Query: 479 KHLHTS 484
H +
Sbjct: 1041 LHFGNA 1046
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
K V YNILI + + DL M++ GC P T+T+N +L LCKN DA
Sbjct: 572 KLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKN----DA 627
Query: 351 CELLEEMLGR----NCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAA 406
+L +M R NC PD +TY I + G+ AF F++QM K+ L P T
Sbjct: 628 VDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQM-KKFLSPDHVTLYT 686
Query: 407 FIKGYFIFYRYEDAYKYVV 425
+ G R EDA K V+
Sbjct: 687 LLPGVVKDGRVEDAIKIVM 705
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 73/157 (46%)
Query: 318 LLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSC 377
L VEM+ GC P TYN +L K+ + + EL EML R C P+ IT+ I I
Sbjct: 810 LFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALV 869
Query: 378 RVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNM 437
+ + A + + +++ P T+ I G R E+A K D +
Sbjct: 870 KSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCA 929
Query: 438 LYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVY 474
+Y++L + K N +A ++ M+K G+RP++ Y
Sbjct: 930 IYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSY 966
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 83/214 (38%), Gaps = 18/214 (8%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y +LI +C ++L +MR +P +TY ++ G
Sbjct: 297 VVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWS 356
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM PD +TY I + C+ GK D AF+ + M RG+ P L T+ I G
Sbjct: 357 EMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLR 416
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R ++A + + + Y L + K +P A + +M K G+ P++
Sbjct: 417 RLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSI---- 472
Query: 476 RVLKHLHTSHQEHMAKCLSSRYSSLSLGSSVEAR 509
A C +S YS +G EA+
Sbjct: 473 --------------AACNASLYSLAEMGRIREAK 492
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 92/211 (43%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
V Y IL++ +C+ D+L MR G P TYN ++ L + +A EL
Sbjct: 367 VVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFN 426
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
M P A +Y +FI Y ++G + A + F +M KRG+ P +A A +
Sbjct: 427 NMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMG 486
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
R +A + S ++ Y+++ + K A +L+EM+ G P++ V
Sbjct: 487 RIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVN 546
Query: 476 RVLKHLHTSHQEHMAKCLSSRYSSLSLGSSV 506
++ L+ + + A + R L L +V
Sbjct: 547 SLIDTLYKAGRVDEAWQMFGRLKDLKLAPTV 577
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 303 IKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEMLGRNC 362
+ EM R + +D+ ++ G P ++TYN ++ K GQ A +LL EML C
Sbjct: 482 LAEMGR---IREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGC 538
Query: 363 HPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKG 410
PD I I + G+ D A+ F ++ L P + T+ I G
Sbjct: 539 EPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITG 586
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 75/181 (41%)
Query: 297 SYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEE 356
+ YNILI + + DL M + G P +Y ++ L G+ DA EE
Sbjct: 929 AIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEE 988
Query: 357 MLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYR 416
+ PD ++Y + I + + + A + F++M RG+ P L T+ A I +
Sbjct: 989 LKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGM 1048
Query: 417 YEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRR 476
+ A K + Y+ L H K+ N A +V +MM G PN + +
Sbjct: 1049 VDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQ 1108
Query: 477 V 477
+
Sbjct: 1109 L 1109
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 78/183 (42%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y + I + D + D +M++ G P N L L + G+ +A ++ ++
Sbjct: 440 YVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIH 499
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
PD++TY + + + G+ D A +M+ G +P + + I + R +
Sbjct: 500 NCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVD 559
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A++ D + + + Y++L + K + A ++ M ++G PN + +L
Sbjct: 560 EAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALL 619
Query: 479 KHL 481
L
Sbjct: 620 DCL 622
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 5/207 (2%)
Query: 280 GLYEMAKYVIKKTERK-----VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTY 334
G + A + K+ E K + YN L+ +C+ + LL +M P +T+
Sbjct: 219 GCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITF 278
Query: 335 NYVLGVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVK 394
N ++ V K G+ +A EL +EM+ + P+ ITY + C + A N + MV+
Sbjct: 279 NVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVR 338
Query: 395 RGLQPRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVM 454
P + T + IKGY R ++ K + + ++ + YS+L ++ +
Sbjct: 339 NNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEI 398
Query: 455 AKNVLSEMMKNGLRPNVSVYRRVLKHL 481
A+ + EM+ G+ P+V Y +L L
Sbjct: 399 AEELFQEMVSLGVLPDVMTYGILLDGL 425
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 97/224 (43%)
Query: 279 LGLYEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVL 338
L L + K + + V Y+ +I +CR L EM G + +TYN ++
Sbjct: 188 LALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLV 247
Query: 339 GVLCKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQ 398
G LCK G+ D +LL++M R P+ IT+ + I + GK A + +M+ +G+
Sbjct: 248 GGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGIS 307
Query: 399 PRLATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNV 458
P T+ + + GY + R +A + L S + ++ L + K +
Sbjct: 308 PNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKL 367
Query: 459 LSEMMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSSLSL 502
++ K GL N Y +++ S + +A+ L SL +
Sbjct: 368 FRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGV 411
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 85/186 (45%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
Y+IL++ C+ + +L EM +G P +TY +L LC NG+ A E+ E++
Sbjct: 383 YSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 442
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ D + Y I I C+ GK + A+N F + +G++P + T+ I G
Sbjct: 443 KSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLS 502
Query: 419 DAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRVL 478
+A + + ++ Y+ L H ++ + + ++ EM G + S + V+
Sbjct: 503 EANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 562
Query: 479 KHLHTS 484
L ++
Sbjct: 563 DMLSSA 568
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 87/204 (42%), Gaps = 1/204 (0%)
Query: 296 VSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLE 355
+ + LIK C+ L ++ + G T+TY+ ++ C++G+ A EL +
Sbjct: 345 IVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQ 404
Query: 356 EMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFY 415
EM+ PD +TY I + C GK + A F + K + + + I+G
Sbjct: 405 EMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGG 464
Query: 416 RYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYR 475
+ EDA+ K + M Y+++ S K + A +L +M ++G PN Y
Sbjct: 465 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYN 524
Query: 476 RVLK-HLHTSHQEHMAKCLSSRYS 498
+++ HL AK + S
Sbjct: 525 TLIRAHLRDGDLTASAKLIEEMKS 548
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 73/175 (41%), Gaps = 17/175 (9%)
Query: 243 KALTKKGIWRVVEVLNQVGGSCLVSGVRALIEMFSVLGLYEMAKYVIKKTER-----KVS 297
+ ++K+G+ V N V S LV G F G E+A+ + ++ V
Sbjct: 369 RKISKRGL-----VANTVTYSILVQG-------FCQSGKLEIAEELFQEMVSLGVLPDVM 416
Query: 298 YYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEM 357
Y IL+ +C + ++ ++++ + Y ++ +CK G+ DA L +
Sbjct: 417 TYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSL 476
Query: 358 LGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYF 412
+ P+ +TY + I C+ G A +M + G +P T+ I+ +
Sbjct: 477 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHL 531
Score = 41.6 bits (96), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 43/102 (42%)
Query: 291 KTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADA 350
K + Y I+I+ MC+ + +L + G +P +TY ++ LCK G ++A
Sbjct: 445 KMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 504
Query: 351 CELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQM 392
LL +M P+ TY I R G + +M
Sbjct: 505 NILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEM 546
>gi|255661020|gb|ACU25679.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 376
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 88/184 (47%), Gaps = 2/184 (1%)
Query: 299 YNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDADACELLEEML 358
YN LI + F+ + EM C P +TYN ++ LCK + +A +L++EML
Sbjct: 167 YNALINGLVGSSKFEDAIRVFQEMGSTHCSPTIITYNTLINGLCKGERFGEAYDLVKEML 226
Query: 359 GRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLATHAAFIKGYFIFYRYE 418
+ +P ITY + I C K ++A + Q+ +G +P + H I G + +
Sbjct: 227 EKGWNPCVITYSMLIKGLCLCHKVEMALQLWYQVTSKGFKPDIQMHNILIHGLCSVGKMQ 286
Query: 419 DAYKYVVLSADKYKSSSNML-YSLLASLHDKNNNPVMAKNVLSEMMKNGLRPNVSVYRRV 477
A + + + + N++ ++ L K+ + A + + +++NGL+P++ Y
Sbjct: 287 LALS-LYFDMNHWNCAPNLVTHNTLMEGFYKDGDVRNALVIWARILRNGLQPDIISYNIT 345
Query: 478 LKHL 481
LK L
Sbjct: 346 LKGL 349
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 97/218 (44%)
Query: 282 YEMAKYVIKKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVL 341
+E+ + + K+ R V+ +NI+++ + + M++ G ++TY ++
Sbjct: 45 FELWELMGKEGSRNVASFNIMMRGLFNNGKVDEVILIWELMKKSGFVEDSITYGILVHGF 104
Query: 342 CKNGQDADACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRL 401
CKNG + +LE + DA Y I C+ K D A + N M+K G +P
Sbjct: 105 CKNGDVNKSLHVLEIAEMKGGVLDAFAYSAMINGLCKDSKLDKAVSVLNGMIKSGCKPNA 164
Query: 402 ATHAAFIKGYFIFYRYEDAYKYVVLSADKYKSSSNMLYSLLASLHDKNNNPVMAKNVLSE 461
+ A I G ++EDA + + S + + Y+ L + K A +++ E
Sbjct: 165 HVYNALINGLVGSSKFEDAIRVFQEMGSTHCSPTIITYNTLINGLCKGERFGEAYDLVKE 224
Query: 462 MMKNGLRPNVSVYRRVLKHLHTSHQEHMAKCLSSRYSS 499
M++ G P V Y ++K L H+ MA L + +S
Sbjct: 225 MLEKGWNPCVITYSMLIKGLCLCHKVEMALQLWYQVTS 262
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 48/114 (42%)
Query: 290 KKTERKVSYYNILIKEMCRRCDFKGPRDLLVEMRQVGCEPITLTYNYVLGVLCKNGQDAD 349
K + + +NILI +C + L +M C P +T+N ++ K+G +
Sbjct: 263 KGFKPDIQMHNILIHGLCSVGKMQLALSLYFDMNHWNCAPNLVTHNTLMEGFYKDGDVRN 322
Query: 350 ACELLEEMLGRNCHPDAITYEIFIVYSCRVGKFDVAFNFFNQMVKRGLQPRLAT 403
A + +L PD I+Y I + C + A F + + + + P + T
Sbjct: 323 ALVIWARILRNGLQPDIISYNITLKGLCSCNRISGAILFLHDALTKKIVPTIIT 376
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.134 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,377,386,477
Number of Sequences: 23463169
Number of extensions: 296841626
Number of successful extensions: 863622
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4475
Number of HSP's successfully gapped in prelim test: 1082
Number of HSP's that attempted gapping in prelim test: 806433
Number of HSP's gapped (non-prelim): 33879
length of query: 509
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 362
effective length of database: 8,910,109,524
effective search space: 3225459647688
effective search space used: 3225459647688
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (35.0 bits)