BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047222
(342 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255586174|ref|XP_002533746.1| ubiquitin fusion degradaton protein, putative [Ricinus communis]
gi|223526334|gb|EEF28633.1| ubiquitin fusion degradaton protein, putative [Ricinus communis]
Length = 315
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/337 (65%), Positives = 258/337 (76%), Gaps = 27/337 (8%)
Query: 5 HHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRV 64
H+ + FER YRCYP SFIDKPHLE GDKI+MPPSALD+LA LHI+YPMLFEL N SA RV
Sbjct: 6 HNSSMFERSYRCYPGSFIDKPHLEKGDKIIMPPSALDQLASLHIDYPMLFELRNPSAERV 65
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
T+CGV+EF+ADEGLI+LPYWMMENMLLQEGD+V++KNASL KG+YVKLQPHT DFLDISN
Sbjct: 66 THCGVLEFVADEGLIFLPYWMMENMLLQEGDLVQLKNASLMKGTYVKLQPHTTDFLDISN 125
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDF 184
PKA+LET+LR+YSCLTTGDTIMV YNNKKYYI++VETKPS AVSIIETDCEVDF PPLD+
Sbjct: 126 PKAILETSLRNYSCLTTGDTIMVAYNNKKYYIDIVETKPSPAVSIIETDCEVDFAPPLDY 185
Query: 185 KEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPF 244
KEPEKPS S SN+T P +V+EEP KKI KFSPF
Sbjct: 186 KEPEKPSPSPRSNQTRP---------------------------KVEEEPAKKIPKFSPF 218
Query: 245 TGSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNANQ 304
+G+ R L+GK STQP + + P++ Q A I GSK S+A+SR SGKL+FGSNANQ
Sbjct: 219 SGAARRLDGKLSTQPVAAVTEPVLKQHQSEAGTDIRGSKPSNAASRSHSGKLIFGSNANQ 278
Query: 305 SSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
N ++ K SS E PQ E PKFQAFTGK+YSL+
Sbjct: 279 PQNEAREIAAKKSSPEAPQKAEPPKFQAFTGKRYSLK 315
>gi|118485222|gb|ABK94471.1| unknown [Populus trichocarpa]
Length = 314
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 221/340 (65%), Positives = 257/340 (75%), Gaps = 29/340 (8%)
Query: 3 ENHHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAG 62
++HH ++FE+ YRCYP+SFIDK HLE GDKI+MPPSALDRLA LHI+YPMLFEL N SAG
Sbjct: 4 QDHHSSSFEQSYRCYPVSFIDKAHLEKGDKIIMPPSALDRLATLHIDYPMLFELHNPSAG 63
Query: 63 RVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDI 122
R ++CGV+EFIADEG+IYLPYWMMENMLLQEGDIV+++N SL KG++VKLQPHTKDFLDI
Sbjct: 64 RTSHCGVLEFIADEGMIYLPYWMMENMLLQEGDIVQLRNTSLEKGTFVKLQPHTKDFLDI 123
Query: 123 SNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPL 182
SNPKA+LET+LR+YSCLTTGDTIMV YNNKKYYI++VE KPS+A+SIIETDCEVDF PPL
Sbjct: 124 SNPKAILETSLRNYSCLTTGDTIMVAYNNKKYYIDIVEAKPSSAISIIETDCEVDFAPPL 183
Query: 183 DFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFS 242
D+K PEKP S SN+ PPE EEP K+ +FS
Sbjct: 184 ---------------------------DYKEPEKPKSIPRSNKIPPEGMEEPAAKMPRFS 216
Query: 243 PFTGSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNA 302
FTGS R L+GK +TQPT S P + Q A N NGSK S+ S Q+SGKLVFGS +
Sbjct: 217 AFTGSARRLDGKPATQPTASTICPALKQHQPEAEN--NGSKLLSSLSHQQSGKLVFGSTS 274
Query: 303 NQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
NQ N TPKV K S+ EPPQ E PKFQAFTGKKYSL+G
Sbjct: 275 NQPQNETPKVPLKKSTQEPPQKVEDPKFQAFTGKKYSLKG 314
>gi|224059470|ref|XP_002299862.1| predicted protein [Populus trichocarpa]
gi|222847120|gb|EEE84667.1| predicted protein [Populus trichocarpa]
Length = 306
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 220/338 (65%), Positives = 254/338 (75%), Gaps = 32/338 (9%)
Query: 5 HHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRV 64
HH ++FE+ YRCYP+SFIDK HLE GDKI+MPPSALDRLA LHI+YPMLFEL N SAGR
Sbjct: 1 HHSSSFEQSYRCYPVSFIDKAHLEKGDKIIMPPSALDRLATLHIDYPMLFELHNPSAGRT 60
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
++CGV+EFIADEG+IYLPYWMMENMLLQEGDIV+++N SL KG++VKLQPHTKDFLDISN
Sbjct: 61 SHCGVLEFIADEGMIYLPYWMMENMLLQEGDIVQLRNTSLEKGTFVKLQPHTKDFLDISN 120
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDF 184
PKA+LET+LR+YSCLTTGDTIMV YNNKKYYI++VE KPS+A+SIIETDCEVDF
Sbjct: 121 PKAILETSLRNYSCLTTGDTIMVAYNNKKYYIDIVEAKPSSAISIIETDCEVDF------ 174
Query: 185 KEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPF 244
PPLD+K PEKP S SN+ PPE EP K+ +FS F
Sbjct: 175 ---------------------APPLDYKEPEKPKSIPRSNKIPPE---EPAAKMPRFSAF 210
Query: 245 TGSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNANQ 304
TGS R L+GK +TQPT S P + Q A N NGSK S+ S Q+SGKLVFGS +NQ
Sbjct: 211 TGSARRLDGKPATQPTASTICPALKQHQPEAEN--NGSKLLSSLSHQQSGKLVFGSTSNQ 268
Query: 305 SSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
N TPKV K S+ EPPQ E PKFQAFTGKKYSL+G
Sbjct: 269 PQNETPKVPLKKSTQEPPQKVEDPKFQAFTGKKYSLKG 306
>gi|356557947|ref|XP_003547271.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Glycine
max]
Length = 318
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/341 (63%), Positives = 255/341 (74%), Gaps = 28/341 (8%)
Query: 2 YENHHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSA 61
Y + A FE+ YRCYP+SFI+KP LE GDKI+MPPSALDRLA LHIEYPMLF++ N SA
Sbjct: 4 YRDDRFATFEQFYRCYPVSFIEKPDLEKGDKIIMPPSALDRLASLHIEYPMLFQIKNPSA 63
Query: 62 GRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLD 121
RVT+CGV+EF++DEG+IY+PYWMMENMLLQEGDIV+VKN +LAKG+YVKLQPHTKDFLD
Sbjct: 64 ERVTHCGVLEFVSDEGIIYIPYWMMENMLLQEGDIVKVKNTNLAKGTYVKLQPHTKDFLD 123
Query: 122 ISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPP 181
ISNPKA+LETTLRSYSCLTTGDTIMVPYNNKKYYI++VETKPS AVSIIETDCEVDF PP
Sbjct: 124 ISNPKAILETTLRSYSCLTTGDTIMVPYNNKKYYIDIVETKPSPAVSIIETDCEVDFAPP 183
Query: 182 LDFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKF 241
LD+KEPEK + + +R P+V++EPP KIA+
Sbjct: 184 LDYKEPEKQAKPVVFDRKRPKVEDEPPT---------------------------KIARL 216
Query: 242 SPFTGSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSN 301
+PFTGSGR L+GK S SSP + Q + + SKSS+ SR+ SGKLVFGSN
Sbjct: 217 TPFTGSGRRLDGKPSAPSVEQTSSPELKQRQTDKEIKGSDSKSSNTVSRRHSGKLVFGSN 276
Query: 302 ANQSS-NGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
A S TPKV +++S E Q EE+PKF+AFTGKKYSL+
Sbjct: 277 ATTSDIQTTPKVSQENTSQEKSQKEEEPKFKAFTGKKYSLK 317
>gi|42570967|ref|NP_973557.1| ubiquitin fusion degradation UFD1-like protein [Arabidopsis
thaliana]
gi|44917441|gb|AAS49045.1| At2g29070 [Arabidopsis thaliana]
gi|45773886|gb|AAS76747.1| At2g29070 [Arabidopsis thaliana]
gi|111609944|gb|ABH11522.1| UFD1c [synthetic construct]
gi|330253112|gb|AEC08206.1| ubiquitin fusion degradation UFD1-like protein [Arabidopsis
thaliana]
Length = 312
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/338 (60%), Positives = 245/338 (72%), Gaps = 34/338 (10%)
Query: 8 AAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYC 67
++FE+ YRCYP++FIDK HLE GDKI+MPPSALDRLA LHIEYPMLF+LSN S + ++C
Sbjct: 6 SSFEQCYRCYPVTFIDKAHLEKGDKIIMPPSALDRLASLHIEYPMLFQLSNVSVEKTSHC 65
Query: 68 GVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKA 127
GV+EF ADEGL+YLPYWMM+NM L+EGD+++VKN SL KG+Y+KLQPHT+DFLDISNPKA
Sbjct: 66 GVLEFTADEGLVYLPYWMMQNMSLEEGDVMQVKNISLVKGTYIKLQPHTQDFLDISNPKA 125
Query: 128 VLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEP 187
+LETTLRSYSCLTTGDTIMVPYNNK+YYINVVE KPS+AVSIIETDCEVDF PPLD+KEP
Sbjct: 126 ILETTLRSYSCLTTGDTIMVPYNNKQYYINVVEAKPSSAVSIIETDCEVDFAPPLDYKEP 185
Query: 188 EKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTGS 247
EKP + SN+ +VKEE EEP K+ KF+PFTGS
Sbjct: 186 EKPQKLTPSNKRPLQVKEE-------------------------EEPASKVPKFTPFTGS 220
Query: 248 GRCLNGKSSTQPTVSPSSPLIDNPQQN--AANGINGSKSSSASSRQKSGKLVFGSNANQS 305
G+ L+GK+ TQ P D QQ NG + K S + RQ SGKLVFGSN+ +
Sbjct: 221 GKRLDGKAQTQ--TEPE----DTKQQEKPTENGKDDEKLSVTTPRQISGKLVFGSNSKSA 274
Query: 306 SNGTPKV-LPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
+ T KV PK+ E ++ KF+ FTGKKYSL G
Sbjct: 275 AKETAKVDDPKNIVQESSTKSDEAKFKVFTGKKYSLNG 312
>gi|297822635|ref|XP_002879200.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325039|gb|EFH55459.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 313
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/343 (60%), Positives = 246/343 (71%), Gaps = 35/343 (10%)
Query: 4 NHHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGR 63
N ++FE+ YRCYP++FIDK HLE GDKI+MPPSALDRLA LHIEYPMLF+LSN S +
Sbjct: 2 NGDGSSFEQCYRCYPVTFIDKAHLEKGDKIIMPPSALDRLASLHIEYPMLFQLSNVSVEK 61
Query: 64 VTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDIS 123
++CGV+EF ADEGL+YLPYWMM+NM LQEGD+++VKN SL KG+Y+KLQPHT+DFLDIS
Sbjct: 62 TSHCGVLEFSADEGLVYLPYWMMQNMSLQEGDVMQVKNISLVKGTYIKLQPHTQDFLDIS 121
Query: 124 NPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLD 183
NPKA+LETTLRSYSCLTTGDTIMVPYNNK+YYINVVE KPS+AVSIIETDCEVDF PPLD
Sbjct: 122 NPKAILETTLRSYSCLTTGDTIMVPYNNKQYYINVVEAKPSSAVSIIETDCEVDFAPPLD 181
Query: 184 FKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSP 243
+KEPEK + SN+ EVKEE EEP K+ KF+P
Sbjct: 182 YKEPEKLQKLTPSNKRPLEVKEE-------------------------EEPASKVPKFTP 216
Query: 244 FTGSGRCLNGKSSTQPTVSPSSPLIDNPQQN--AANGINGSKSSSASSRQKSGKLVFGSN 301
FTGSG+ L+GK+ TQ P D QQ NG K S + RQ+SGKLVFGSN
Sbjct: 217 FTGSGKRLDGKAQTQ--TEPE----DTKQQEKPTENGKYDEKLSVTTPRQRSGKLVFGSN 270
Query: 302 AN-QSSNGTPKVL-PKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
+ ++ T KV+ PK+ E ++ KFQ FTGKKYSL G
Sbjct: 271 SKPLAAKETVKVVAPKNIEQESSTKSDEAKFQVFTGKKYSLNG 313
>gi|356547269|ref|XP_003542038.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin fusion degradation
protein 1 homolog [Glycine max]
Length = 316
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/336 (61%), Positives = 244/336 (72%), Gaps = 31/336 (9%)
Query: 10 FERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGV 69
FE+ YRCYP+SFI+KP LE GDKI+MPPSALDRLA LHIEYPMLF++ N SA RVT+CGV
Sbjct: 7 FEQFYRCYPVSFIEKPDLEKGDKIIMPPSALDRLASLHIEYPMLFQIKNPSAERVTHCGV 66
Query: 70 MEFIADEGLIYLP---YWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
+EF++DEG IY+ Y MMENMLLQEGDIV+VK A+LAKG+YVKLQPHTKDFLDISNPK
Sbjct: 67 LEFVSDEGTIYIHHNGYAMMENMLLQEGDIVKVKIATLAKGTYVKLQPHTKDFLDISNPK 126
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
A+LETTLRSYSCLT GDTIMVPYNNKKYYI++VET PS AV IIETDCEVDF PPLD+KE
Sbjct: 127 AILETTLRSYSCLTAGDTIMVPYNNKKYYIDIVETIPSPAVIIIETDCEVDFAPPLDYKE 186
Query: 187 PEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTG 246
PEK + + +R PE V++EPP KIA+ +PFT
Sbjct: 187 PEKQAKPVVFDRKQPE---------------------------VEDEPPAKIARLTPFTV 219
Query: 247 SGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNANQSS 306
SGR L+GK S Q SS + Q + + SKSS+ SR+ SGKLVFGSNA S
Sbjct: 220 SGRHLDGKPSAQSVEQASSSELKQKQTDKEIKGSDSKSSNTVSRRHSGKLVFGSNATTSD 279
Query: 307 -NGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
TPKV +++ E Q E++PKF+AFTGKKYSL+
Sbjct: 280 VQTTPKVSQENTCKEKSQKEQEPKFKAFTGKKYSLK 315
>gi|357521303|ref|XP_003630940.1| Ubiquitin fusion degradation protein [Medicago truncatula]
gi|355524962|gb|AET05416.1| Ubiquitin fusion degradation protein [Medicago truncatula]
Length = 320
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/344 (58%), Positives = 247/344 (71%), Gaps = 37/344 (10%)
Query: 5 HHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRV 64
+H +FE+ YRCYP SFI+KP LE+GDKI+MPPSALDRLA LHI+YPMLFEL N +A RV
Sbjct: 8 YHGTSFEQTYRCYPASFIEKPQLESGDKIIMPPSALDRLASLHIDYPMLFELRNAAAERV 67
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
++CGV+EFIA+EG+IY+PYWMMENMLLQEGD+V VKN +L KG+YVKLQPHTKDFLDISN
Sbjct: 68 SHCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTKDFLDISN 127
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDF 184
PKA+LETTLR++SCLTTGD+IMV YNNKKYYI++VE+KP+ A+SIIETDCEVDF PPLD+
Sbjct: 128 PKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVESKPANAISIIETDCEVDFAPPLDY 187
Query: 185 KEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPF 244
KEPE+P + P S+ + P KE P + KF+PF
Sbjct: 188 KEPERPVA------------------------PRSAG---KAPEADKEAPAETEPKFNPF 220
Query: 245 TGSGRCLNGK--SSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSR----QKSGKLVF 298
TGSGR L+GK + P VS S NP AA +N S+++SS+ Q GKLVF
Sbjct: 221 TGSGRRLDGKPLNYQPPPVSSSGSKDKNP---AAQNVNSQPSTASSSQSNAPQTQGKLVF 277
Query: 299 GSNANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
GSN N+ T K + EPP+ +E+ KFQ FTGKKYSLRG
Sbjct: 278 GSNPNRGKE-TGKATEAKAKQEPPKEKEEDKFQPFTGKKYSLRG 320
>gi|192911936|gb|ACF06576.1| ubiquitin fusion degradation protein [Elaeis guineensis]
Length = 320
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/342 (60%), Positives = 252/342 (73%), Gaps = 35/342 (10%)
Query: 5 HHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRV 64
+H +FE+ YRCYP SFIDKP LE+GDKI+MPPSALDRLA LHI+YPMLFEL N++ RV
Sbjct: 10 YHGNSFEQTYRCYPASFIDKPQLESGDKIIMPPSALDRLASLHIDYPMLFELRNSATERV 69
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
++CGV+EFIA+EG+IY+PYWMM+N+LLQEGD V VKNA+L KG+YVKLQPHTKDFLDISN
Sbjct: 70 SHCGVLEFIAEEGMIYMPYWMMQNLLLQEGDTVRVKNATLPKGTYVKLQPHTKDFLDISN 129
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDF 184
PKA+LETTLR++SCLTTGD+IMV YNNKKYYI++VETKPS+A+SIIETDCEVDF PPLD+
Sbjct: 130 PKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSSAISIIETDCEVDFAPPLDY 189
Query: 185 KEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPF 244
KEPE+P S +P K P++ E + EP KF+PF
Sbjct: 190 KEPERPQPS------IPTSKAPVPVE--------------DAQAEAEVEP-----KFTPF 224
Query: 245 TGSGRCLNGK--SSTQPTVSPSSPLIDNPQQNAANGI--NGSKSSSASSRQKSGKLVFGS 300
TG GR L+GK PTVS S+ Q NG+ S S S+SSRQ GKLVFGS
Sbjct: 225 TGIGRRLDGKPLKHQAPTVSSSA---KGQQSETTNGVKKTASTSESSSSRQTKGKLVFGS 281
Query: 301 NANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
NAN++S +VL ++ E P +E+PKFQAFTGKKYSL+G
Sbjct: 282 NANRASKEA-QVLKQTK--EEPAKKEEPKFQAFTGKKYSLKG 320
>gi|118488238|gb|ABK95938.1| unknown [Populus trichocarpa]
Length = 324
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/348 (58%), Positives = 250/348 (71%), Gaps = 40/348 (11%)
Query: 4 NHHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGR 63
+H +FE+ YRCYP SFI+KP +E+GDKI+MPPSALDRLA LHI+YPMLFEL N +A R
Sbjct: 8 GYHGTSFEQTYRCYPASFIEKPQIESGDKIIMPPSALDRLASLHIDYPMLFELQNDAAER 67
Query: 64 VTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDIS 123
V++CGV+EFIA+EG+IY+PYWMMEN+LLQEGD V VKN +L KG YVKLQPHTKDFLDIS
Sbjct: 68 VSHCGVLEFIAEEGMIYMPYWMMENLLLQEGDTVRVKNVTLPKGKYVKLQPHTKDFLDIS 127
Query: 124 NPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLD 183
NPKA+LETTLR+YSCLTTGD+IMV YNNKKYYI+++ETKPS A+SIIETDCEVDF PPLD
Sbjct: 128 NPKAILETTLRNYSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVDFAPPLD 187
Query: 184 FKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSP 243
+KEPEKP +S +P P K +S + +E P + KF+P
Sbjct: 188 YKEPEKPVAS------VP------------PSKATS---------QAEEVPAETEPKFNP 220
Query: 244 FTGSGRCLNGKS-STQPTVSPSSPLIDNPQQNAANGING---SKSSSASSRQKSGKLVFG 299
FTG+GR L+GK S QP + SS + + Q A+G SS ++R+ GKLVFG
Sbjct: 221 FTGAGRRLDGKPLSYQPPPALSSSVSKDKQPAVADGSRQPSLGSSSQNTARKSQGKLVFG 280
Query: 300 SNANQSSNGTPKVLPKSSSG-----EPPQVEEKPKFQAFTGKKYSLRG 342
SN + TPK + SG E P+ +E+PKFQAFTGKKYSL+G
Sbjct: 281 SNTGR----TPKETQREESGKETKQEQPEKKEEPKFQAFTGKKYSLKG 324
>gi|224103317|ref|XP_002313007.1| predicted protein [Populus trichocarpa]
gi|222849415|gb|EEE86962.1| predicted protein [Populus trichocarpa]
Length = 323
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/348 (58%), Positives = 250/348 (71%), Gaps = 40/348 (11%)
Query: 4 NHHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGR 63
+H +FE+ YRCYP SFI+KP +E+GDKI+MPPSALDRLA LHI+YPMLFEL N +A R
Sbjct: 7 GYHGTSFEQTYRCYPASFIEKPQIESGDKIIMPPSALDRLASLHIDYPMLFELQNDAAER 66
Query: 64 VTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDIS 123
V++CGV+EFIA+EG+IY+PYWMMEN+LLQEGD V VKN +L KG YVKLQPHTKDFLDIS
Sbjct: 67 VSHCGVLEFIAEEGMIYMPYWMMENLLLQEGDTVRVKNVTLPKGKYVKLQPHTKDFLDIS 126
Query: 124 NPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLD 183
NPKA+LETTLR+YSCLTTGD+IMV YNNKKYYI+++ETKPS A+SIIETDCEVDF PPLD
Sbjct: 127 NPKAILETTLRNYSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVDFAPPLD 186
Query: 184 FKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSP 243
+KEPEKP +S +P P K +S + +E P + KF+P
Sbjct: 187 YKEPEKPVAS------VP------------PSKATS---------QAEEVPAETEPKFNP 219
Query: 244 FTGSGRCLNGKS-STQPTVSPSSPLIDNPQQNAANGING---SKSSSASSRQKSGKLVFG 299
FTG+GR L+GK S QP + SS + + Q A+G SS ++R+ GKLVFG
Sbjct: 220 FTGAGRRLDGKPLSYQPPPALSSSVSKDKQPAVADGSRQPSLGSSSQNTARKSQGKLVFG 279
Query: 300 SNANQSSNGTPKVLPKSSSG-----EPPQVEEKPKFQAFTGKKYSLRG 342
SN + TPK + SG E P+ +E+PKFQAFTGKKYSL+G
Sbjct: 280 SNTGR----TPKETQREESGKETKQEQPEKKEEPKFQAFTGKKYSLKG 323
>gi|449464840|ref|XP_004150137.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Cucumis
sativus]
Length = 321
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/347 (57%), Positives = 240/347 (69%), Gaps = 40/347 (11%)
Query: 4 NHHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGR 63
+H +FE+ YRCYP SFI+KP LE GDKI+MPPSALDRLA LHI+YPMLFEL N R
Sbjct: 7 GYHGTSFEQTYRCYPASFIEKPQLETGDKIIMPPSALDRLASLHIDYPMLFELRNDVTER 66
Query: 64 VTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDIS 123
+++CGV+EFIA+EG+IY+PYWMMENMLLQEGD+V VKN +L KG+YVKLQPHTKDFLDIS
Sbjct: 67 LSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTKDFLDIS 126
Query: 124 NPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLD 183
NPKA+LETTLR++SCLTTGD+IMV YNNKKYYI+++ETKPS A+SIIETDCEVDF PPLD
Sbjct: 127 NPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVDFAPPLD 186
Query: 184 FKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSP 243
+KEPEKP SL P EEPP + EP KF+P
Sbjct: 187 YKEPEKP-VPSLPTGKAPVQDEEPP---------------------AEAEP-----KFNP 219
Query: 244 FTGSGRCLNGKSSTQPTVSPSSPL----IDNPQQNAANGINGSKSSSAS----SRQKSGK 295
FTG+GR L+GK S Q +PL I +Q + G SS ++ SRQ GK
Sbjct: 220 FTGAGRRLDGKPSMQ-----QAPLSWTSISKDKQVDTRTVTGQPSSGSTSRNASRQSEGK 274
Query: 296 LVFGSNANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
LVFG NA+++ T K K E + +E+ KFQ F GKKYSLRG
Sbjct: 275 LVFGGNASRTPKETKKEGEKDGKQEQTKEKEEAKFQPFGGKKYSLRG 321
>gi|255543881|ref|XP_002513003.1| ubiquitin fusion degradaton protein, putative [Ricinus communis]
gi|223548014|gb|EEF49506.1| ubiquitin fusion degradaton protein, putative [Ricinus communis]
Length = 356
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/341 (58%), Positives = 244/341 (71%), Gaps = 30/341 (8%)
Query: 5 HHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRV 64
+H +FE+ YRCYP SFI+KP +E+GDKI+MPPSALDRLA LHI+YPMLFEL N +A R+
Sbjct: 43 YHGTSFEQTYRCYPASFIEKPQIESGDKIIMPPSALDRLASLHIDYPMLFELRNDAAERI 102
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
++CGV+EFIA+EG+IY+PYWMMEN+LLQEGDIV VKN +L KG+YVKLQPHTKDFLDISN
Sbjct: 103 SHCGVLEFIAEEGMIYMPYWMMENLLLQEGDIVRVKNVTLPKGTYVKLQPHTKDFLDISN 162
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDF 184
PKA+LETTLR+YSCLTTGD+IMV YNNKKYYI++VETKPS A+SIIETDCEVDF PPLD+
Sbjct: 163 PKAILETTLRNYSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDY 222
Query: 185 KEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPF 244
KEPE RT P + P+K +++ +V+E P + KF+PF
Sbjct: 223 KEPE---------RTTPSI----------PQKKATA--------QVEEVPEETEPKFNPF 255
Query: 245 TGSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGING---SKSSSASSRQKSGKLVFGSN 301
TG R L+GK Q SS + Q +G SS S+RQ GKLVFGSN
Sbjct: 256 TGVARRLDGKPLKQQPFPVSSQGSKDKQAAVPSGRGQPSLESSSQNSARQSQGKLVFGSN 315
Query: 302 ANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
N++ T K + K + E Q E+PKFQ FTG+KYSL+G
Sbjct: 316 VNRAPKETQKEVAKETKPEQSQKNEEPKFQPFTGRKYSLKG 356
>gi|449526164|ref|XP_004170084.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Cucumis
sativus]
Length = 321
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/347 (57%), Positives = 240/347 (69%), Gaps = 40/347 (11%)
Query: 4 NHHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGR 63
+H +FE+ YRCYP SFI+KP LE GDKI+MPPSALDRLA LHI+YPMLFEL N R
Sbjct: 7 GYHGTSFEQTYRCYPASFIEKPQLETGDKIIMPPSALDRLASLHIDYPMLFELRNDVTER 66
Query: 64 VTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDIS 123
+++CGV+EFIA+EG+IY+PYWMMENMLLQEGD+V VKN +L KG+YVKLQPHTKDFLDIS
Sbjct: 67 LSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTKDFLDIS 126
Query: 124 NPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLD 183
NPKA+LETTLR++SCLTTGD+IMV YNNKKYYI+++ETKPS A+SIIETDCEVDF PPLD
Sbjct: 127 NPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVDFAPPLD 186
Query: 184 FKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSP 243
+KEPEKP SL P EEPP + EP KF+P
Sbjct: 187 YKEPEKP-VPSLPTGKAPVQDEEPP---------------------AEAEP-----KFNP 219
Query: 244 FTGSGRCLNGKSSTQPTVSPSSPL----IDNPQQNAANGINGSKSSSAS----SRQKSGK 295
FTG+GR L+GK S Q +PL I +Q + G S+ ++ SRQ GK
Sbjct: 220 FTGAGRRLDGKPSMQ-----QAPLSWTSISKDKQVDTRTVTGQPSAGSTSRNASRQSEGK 274
Query: 296 LVFGSNANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
LVFG NA+++ T K K E + +E+ KFQ F GKKYSLRG
Sbjct: 275 LVFGGNASRTPKETKKEGEKDGKQEQTKEKEEAKFQPFGGKKYSLRG 321
>gi|225427780|ref|XP_002268781.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Vitis
vinifera]
Length = 319
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/341 (59%), Positives = 243/341 (71%), Gaps = 30/341 (8%)
Query: 4 NHHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGR 63
+H +FE+KYRCYP SFIDKP +E+G KI+MPPSALDRLA LHI+YPMLFELSN +A R
Sbjct: 7 GYHGMSFEQKYRCYPASFIDKPQIESGGKIIMPPSALDRLASLHIDYPMLFELSNPAAQR 66
Query: 64 VTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDIS 123
V++CGV+EFIA+EG+IY+PYWMMENMLLQEGD V+VKN +L KG+YVKLQPHT DFLDIS
Sbjct: 67 VSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDTVQVKNVTLPKGTYVKLQPHTTDFLDIS 126
Query: 124 NPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLD 183
NPKA+LETTLR++SCLTTGD+IMV YNNKKYYI++VETKPS A+SIIETDCEVDF PPLD
Sbjct: 127 NPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLD 186
Query: 184 FKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSP 243
FKEPEKP + + EV+E P V+ EP KF+P
Sbjct: 187 FKEPEKPVAPVPLGKAAAEVQEAP----------------------VEPEP-----KFNP 219
Query: 244 FTGSGRCLNGKSSTQ--PTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSN 301
F G GR L+GK P VS S P + + SS +SSRQ GKLVFGSN
Sbjct: 220 FCGVGRRLDGKPQKYEPPPVSSSGSKDKQPVNRGSGQPSAGSSSQSSSRQSQGKLVFGSN 279
Query: 302 ANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
N+S T K K++ E P+ EE PKFQ F+GKKYSL+G
Sbjct: 280 VNRSPKETQKEAAKATKQEEPKKEE-PKFQPFSGKKYSLKG 319
>gi|357138899|ref|XP_003571024.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog
[Brachypodium distachyon]
Length = 422
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/341 (57%), Positives = 240/341 (70%), Gaps = 36/341 (10%)
Query: 5 HHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRV 64
+ + FE+ YRCYP SFIDKP LE GDKI+MPPSALDRLA LHIEYPMLFE+ NT+A R
Sbjct: 115 YRGSTFEQTYRCYPASFIDKPQLETGDKIIMPPSALDRLASLHIEYPMLFEVRNTAAERA 174
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
++CGV+EFIA+EG+IY+PYWMM+N+LLQEGD+V +KNA+L KG+YVKLQPHT DFLDISN
Sbjct: 175 SHCGVLEFIAEEGMIYMPYWMMQNLLLQEGDMVFIKNANLPKGTYVKLQPHTTDFLDISN 234
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDF 184
PKA+LE TLR+YSCLTTGD+IMV YNNKKYYI++VETKPS+A+SIIETDCEVDF PPLD+
Sbjct: 235 PKAILEKTLRNYSCLTTGDSIMVAYNNKKYYIDIVETKPSSAISIIETDCEVDFAPPLDY 294
Query: 185 KEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPF 244
KEPE+P ++ E ++ F+PF
Sbjct: 295 KEPERPKPTAPPTAAPTAEAEA-----------------------------EEEPMFTPF 325
Query: 245 TGSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASS---RQKSGKLVFGSN 301
TG GR L+GK S S SSP Q NA N + S +S++ S R+ +GKLVFGS
Sbjct: 326 TGPGRRLDGKPSKDLDASGSSPA--KRQANATNSVQPSTASTSQSTAPRKTTGKLVFGSG 383
Query: 302 ANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
NQSS T KV P+ + E P+ EE PK AFTGKKYSL+G
Sbjct: 384 GNQSSKETDKV-PEKDAEEDPKKEE-PKLSAFTGKKYSLKG 422
>gi|297821317|ref|XP_002878541.1| hypothetical protein ARALYDRAFT_480987 [Arabidopsis lyrata subsp.
lyrata]
gi|297324380|gb|EFH54800.1| hypothetical protein ARALYDRAFT_480987 [Arabidopsis lyrata subsp.
lyrata]
Length = 319
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/343 (56%), Positives = 240/343 (69%), Gaps = 34/343 (9%)
Query: 4 NHHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGR 63
++H FE+ YRCYP SFIDKP +E+GDKI+MPPSALDRLA LHI+YPMLFE+ N R
Sbjct: 7 HYHGTTFEQSYRCYPASFIDKPQIESGDKIIMPPSALDRLASLHIDYPMLFEVRNAGIER 66
Query: 64 VTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDIS 123
VT+CGV+EFIA+EG+IY+PYWMM+N+LLQEGDIV V+N +L KG+YVKLQPHT DFLDIS
Sbjct: 67 VTHCGVLEFIAEEGMIYMPYWMMQNLLLQEGDIVRVRNVTLPKGTYVKLQPHTTDFLDIS 126
Query: 124 NPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLD 183
NPKA+LET LR+YSCLTTGD+IMVPYNNKKY+I++VETKP+ A+SIIETDCEVDF PPLD
Sbjct: 127 NPKAILETALRNYSCLTTGDSIMVPYNNKKYFIDIVETKPANAISIIETDCEVDFAPPLD 186
Query: 184 FKEPEKPSSSSLSNRTLP--EVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKF 241
+KEPE+P++ + + EV EP EP KF
Sbjct: 187 YKEPERPTAPAAAKGPAKAEEVVTEP-------------------------EP-----KF 216
Query: 242 SPFTGSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSN 301
+PFTGSGR L+G+ SS P NG + SSS + + GKLVFG+N
Sbjct: 217 NPFTGSGRRLDGRPLAYEPAPASSSKDKQPVVANGNGQSSVASSSEKATRAQGKLVFGAN 276
Query: 302 ANQS-SNGTPKV-LPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
AN++ PKV K + E + +++PKFQAF+GKKYSLRG
Sbjct: 277 ANRAPKEAAPKVGAAKETKQEEQEKKDEPKFQAFSGKKYSLRG 319
>gi|297744721|emb|CBI37983.3| unnamed protein product [Vitis vinifera]
Length = 309
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/336 (60%), Positives = 241/336 (71%), Gaps = 30/336 (8%)
Query: 9 AFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCG 68
+FE+KYRCYP SFIDKP +E+G KI+MPPSALDRLA LHI+YPMLFELSN +A RV++CG
Sbjct: 2 SFEQKYRCYPASFIDKPQIESGGKIIMPPSALDRLASLHIDYPMLFELSNPAAQRVSHCG 61
Query: 69 VMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAV 128
V+EFIA+EG+IY+PYWMMENMLLQEGD V+VKN +L KG+YVKLQPHT DFLDISNPKA+
Sbjct: 62 VLEFIAEEGMIYMPYWMMENMLLQEGDTVQVKNVTLPKGTYVKLQPHTTDFLDISNPKAI 121
Query: 129 LETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPE 188
LETTLR++SCLTTGD+IMV YNNKKYYI++VETKPS A+SIIETDCEVDF PPLDFKEPE
Sbjct: 122 LETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDFKEPE 181
Query: 189 KPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTGSG 248
KP + + EV+E P V+ EP KF+PF G G
Sbjct: 182 KPVAPVPLGKAAAEVQEAP----------------------VEPEP-----KFNPFCGVG 214
Query: 249 RCLNGKSSTQ--PTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNANQSS 306
R L+GK P VS S P + + SS +SSRQ GKLVFGSN N+S
Sbjct: 215 RRLDGKPQKYEPPPVSSSGSKDKQPVNRGSGQPSAGSSSQSSSRQSQGKLVFGSNVNRSP 274
Query: 307 NGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
T K K++ E P+ EE PKFQ F+GKKYSL+G
Sbjct: 275 KETQKEAAKATKQEEPKKEE-PKFQPFSGKKYSLKG 309
>gi|357472787|ref|XP_003606678.1| Ubiquitin fusion degradation protein-like protein [Medicago
truncatula]
gi|355507733|gb|AES88875.1| Ubiquitin fusion degradation protein-like protein [Medicago
truncatula]
Length = 389
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/337 (58%), Positives = 236/337 (70%), Gaps = 37/337 (10%)
Query: 6 HDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
H+ FE Y C+ +S +++P LENGDKI+MP SALDRLA L+IEYPMLFEL NTSA R T
Sbjct: 89 HNEIFEHVYSCFSVSSLNRPILENGDKIIMPSSALDRLARLNIEYPMLFELRNTSAERTT 148
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF ADEG+++LP WMME+MLLQEGD+V +K+ SL KG +VK QPH+KDFLDISNP
Sbjct: 149 HCGVLEFTADEGIVFLPNWMMEDMLLQEGDLVSLKSTSLEKGKFVKFQPHSKDFLDISNP 208
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KA+LET+LRSYSCLTTG TIM+PYNNKKYYI+VVETKPS A+SIIE DCEVDF PPLD+K
Sbjct: 209 KAMLETSLRSYSCLTTGRTIMIPYNNKKYYIDVVETKPSPAISIIEIDCEVDFAPPLDYK 268
Query: 186 EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFT 245
EPEKP S LS++ +V +EEPP K+ K PF+
Sbjct: 269 EPEKPLPSDLSHKKHRQV---------------------------EEEPPTKVPKLIPFS 301
Query: 246 GSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNANQS 305
GSGR L+GK S Q S+P+I QQ N N SS + GKLVFGSNAN S
Sbjct: 302 GSGRRLDGKPSAQSIEQTSTPII--KQQQTENKTN-------SSIRTPGKLVFGSNANAS 352
Query: 306 SNGT-PKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
+ T PK KS+S E + + P+FQAF GKKYSLR
Sbjct: 353 NVQTQPKASLKSASQESSKKTDTPQFQAFLGKKYSLR 389
>gi|357168246|ref|XP_003581555.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog
[Brachypodium distachyon]
Length = 434
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/341 (56%), Positives = 238/341 (69%), Gaps = 31/341 (9%)
Query: 4 NHHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGR 63
+H FE+ YRCYP SF DKPHLE GDK++MPPSALDRLA LHIEYPMLFEL N + R
Sbjct: 121 GYHGNNFEQTYRCYPASFFDKPHLEGGDKVIMPPSALDRLASLHIEYPMLFELHNGATER 180
Query: 64 VTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDIS 123
+++CGV+EF+A+EG+I +PYWMM+NMLLQEGD+V VKNA+L KG+YVKLQPHT DFLDIS
Sbjct: 181 ISHCGVLEFVAEEGMIIMPYWMMQNMLLQEGDMVRVKNATLPKGTYVKLQPHTTDFLDIS 240
Query: 124 NPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLD 183
NPKA+LE TLR++SCLTTGD+IMV YNNK+YYI++VE KP++AVSIIETDCEVDF PPLD
Sbjct: 241 NPKAILEKTLRNFSCLTTGDSIMVAYNNKQYYIDIVEAKPASAVSIIETDCEVDFAPPLD 300
Query: 184 FKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSP 243
+KEPEKP + P P+ +L+ V++EP KF P
Sbjct: 301 YKEPEKP---------------------QQPIVPARKALAEAQDANVEDEP-----KFKP 334
Query: 244 FTGSGRCLNGKSSTQPTVSPSSPLIDNP---QQNAANGINGSKSSSASSRQKSGKLVFGS 300
FTG G+ L+GK S Q SS P + A+ +S S+RQK+GKLVFGS
Sbjct: 335 FTGYGKRLDGKGSKQQAPEVSSAARSAPSDSNKRASQQTASPSGASTSTRQKTGKLVFGS 394
Query: 301 NANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
+A+ S + P S EPP+ +E PKF AF+GK YSL+
Sbjct: 395 SASNSKEAQSQKEPVKGS-EPPKKDE-PKFNAFSGKSYSLK 433
>gi|226528266|ref|NP_001148560.1| LOC100282176 [Zea mays]
gi|195620438|gb|ACG32049.1| ubiquitin fusion degradation protein 1 [Zea mays]
gi|414585800|tpg|DAA36371.1| TPA: ubiquitin fusion degradation protein 1 isoform 1 [Zea mays]
gi|414585801|tpg|DAA36372.1| TPA: ubiquitin fusion degradation protein 1 isoform 2 [Zea mays]
Length = 321
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/342 (55%), Positives = 244/342 (71%), Gaps = 34/342 (9%)
Query: 5 HHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRV 64
+H +FE+ YRCYP SF DKPHLE GDK++MPPSALDRLA LHIEYPMLFEL N + R+
Sbjct: 8 YHGNSFEQTYRCYPASFFDKPHLEGGDKVIMPPSALDRLASLHIEYPMLFELHNDATQRI 67
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
++CGV+EF+A+EG+I +PYWMM+NMLLQEGD V VKNA+L KG+YVKLQPHT DFLDISN
Sbjct: 68 SHCGVLEFVAEEGMIIMPYWMMQNMLLQEGDTVHVKNATLPKGTYVKLQPHTTDFLDISN 127
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDF 184
PKA+LE TLR++SCLTTGD+IMV YNNK+YYI++VETKP++AVSIIETDCEVDF PPLD+
Sbjct: 128 PKAILEKTLRNFSCLTTGDSIMVAYNNKQYYIDIVETKPASAVSIIETDCEVDFAPPLDY 187
Query: 185 KEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPF 244
KEPEKP + P P+S + + V++EP KF PF
Sbjct: 188 KEPEKP---------------------RQPTVPASKAPAEDGNTAVEDEP-----KFKPF 221
Query: 245 TGSGRCLNGKSSTQ-----PTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFG 299
TG G+ L+GK+S P+ + S+P N + N + +S SRQK+GKLVFG
Sbjct: 222 TGFGKRLDGKASKLQASEVPSTALSAPSDSNKRANQQISAPAASGASNYSRQKTGKLVFG 281
Query: 300 SNANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
S+A S+N P+ P + +P + +++ +FQAF+GK YSL+
Sbjct: 282 SSA--SNNKEPQKAP-AKEEQPAKKDDELRFQAFSGKSYSLK 320
>gi|21592947|gb|AAM64897.1| putative ubiquitin fusion-degradation protein [Arabidopsis
thaliana]
Length = 319
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/343 (56%), Positives = 240/343 (69%), Gaps = 34/343 (9%)
Query: 4 NHHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGR 63
++H FE+ YRCYP SFIDKP LE+GDKI+MPPSALDRLA LHI+YPMLFEL N R
Sbjct: 7 HYHGTTFEQSYRCYPASFIDKPQLESGDKIIMPPSALDRLASLHIDYPMLFELRNAGIER 66
Query: 64 VTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDIS 123
VT+CGV+EFIA+EG+IY+PYWMM+N+LLQEGDIV V+N +L KG+YVKLQPHT DFLDIS
Sbjct: 67 VTHCGVLEFIAEEGMIYMPYWMMQNLLLQEGDIVRVRNVTLPKGTYVKLQPHTTDFLDIS 126
Query: 124 NPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLD 183
NPKA+LET LR+YSCLT+GD+IMVPYNNKKY+I++VETKP+ A+SIIETDCEVDF PPLD
Sbjct: 127 NPKAILETALRNYSCLTSGDSIMVPYNNKKYFIDIVETKPANAISIIETDCEVDFAPPLD 186
Query: 184 FKEPEKPSSSSLSNRTLP--EVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKF 241
+KEPE+P++ + + EV +EP EP KF
Sbjct: 187 YKEPERPTAPAAAKGPAKAEEVVDEP-------------------------EP-----KF 216
Query: 242 SPFTGSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSN 301
+PFTGSGR L+G+ SS P NG + SSS + + GKLVFG+N
Sbjct: 217 NPFTGSGRRLDGRPLAYEPAPASSSKDKQPVVANGNGQSSVASSSEKATRAQGKLVFGAN 276
Query: 302 ANQS-SNGTPKV-LPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
AN++ PKV K + E + ++PKFQAF+GKKYSLRG
Sbjct: 277 ANRAPKEAAPKVGAAKETKKEEQEKNDEPKFQAFSGKKYSLRG 319
>gi|18399646|ref|NP_565504.1| ubiquitin fusion degradation 1 [Arabidopsis thaliana]
gi|79322611|ref|NP_001031384.1| ubiquitin fusion degradation 1 [Arabidopsis thaliana]
gi|20197912|gb|AAD23675.2| putative ubiquitin fusion-degradation protein [Arabidopsis
thaliana]
gi|110741145|dbj|BAE98665.1| putative ubiquitin fusion-degradation protein [Arabidopsis
thaliana]
gi|111609940|gb|ABH11520.1| UFD1a [synthetic construct]
gi|193885163|gb|ACF28395.1| At2g21270 [Arabidopsis thaliana]
gi|330252058|gb|AEC07152.1| ubiquitin fusion degradation 1 [Arabidopsis thaliana]
gi|330252059|gb|AEC07153.1| ubiquitin fusion degradation 1 [Arabidopsis thaliana]
Length = 319
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/341 (57%), Positives = 242/341 (70%), Gaps = 30/341 (8%)
Query: 4 NHHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGR 63
++H FE+ YRCYP SFIDKP LE+GDKI+MPPSALDRLA LHI+YPMLFEL N R
Sbjct: 7 HYHGTTFEQSYRCYPASFIDKPQLESGDKIIMPPSALDRLASLHIDYPMLFELRNAGIER 66
Query: 64 VTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDIS 123
VT+CGV+EFIA+EG+IY+PYWMM+N+LLQEGDIV V+N +L KG+YVKLQPHT DFLDIS
Sbjct: 67 VTHCGVLEFIAEEGMIYMPYWMMQNLLLQEGDIVRVRNVTLPKGTYVKLQPHTTDFLDIS 126
Query: 124 NPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLD 183
NPKA+LET LR+YSCLT+GD+IMVPYNNKKY+I++VETKP+ A+SIIETDCEVDF PPLD
Sbjct: 127 NPKAILETALRNYSCLTSGDSIMVPYNNKKYFIDIVETKPANAISIIETDCEVDFAPPLD 186
Query: 184 FKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSP 243
+KEPE+P++ S + KGP K EV +EP KF+P
Sbjct: 187 YKEPERPTAPSAA---------------KGPAKAE----------EVVDEPE---PKFNP 218
Query: 244 FTGSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNAN 303
FTGSGR L+G+ SS P NG + SSS + + GKLVFG+N N
Sbjct: 219 FTGSGRRLDGRPLAYEPAPASSSKGKQPVVANGNGQSSVASSSEKATRAQGKLVFGANGN 278
Query: 304 QS-SNGTPKV-LPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
++ PKV K + E + +++PKFQAF+GKKYSLRG
Sbjct: 279 RAPKEAAPKVGAAKETKKEEQEKKDEPKFQAFSGKKYSLRG 319
>gi|145329208|ref|NP_001077933.1| ubiquitin fusion degradation 1 [Arabidopsis thaliana]
gi|222424176|dbj|BAH20047.1| AT2G21270 [Arabidopsis thaliana]
gi|330252060|gb|AEC07154.1| ubiquitin fusion degradation 1 [Arabidopsis thaliana]
Length = 340
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/341 (57%), Positives = 242/341 (70%), Gaps = 30/341 (8%)
Query: 4 NHHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGR 63
++H FE+ YRCYP SFIDKP LE+GDKI+MPPSALDRLA LHI+YPMLFEL N R
Sbjct: 28 HYHGTTFEQSYRCYPASFIDKPQLESGDKIIMPPSALDRLASLHIDYPMLFELRNAGIER 87
Query: 64 VTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDIS 123
VT+CGV+EFIA+EG+IY+PYWMM+N+LLQEGDIV V+N +L KG+YVKLQPHT DFLDIS
Sbjct: 88 VTHCGVLEFIAEEGMIYMPYWMMQNLLLQEGDIVRVRNVTLPKGTYVKLQPHTTDFLDIS 147
Query: 124 NPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLD 183
NPKA+LET LR+YSCLT+GD+IMVPYNNKKY+I++VETKP+ A+SIIETDCEVDF PPLD
Sbjct: 148 NPKAILETALRNYSCLTSGDSIMVPYNNKKYFIDIVETKPANAISIIETDCEVDFAPPLD 207
Query: 184 FKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSP 243
+KEPE+P++ S + KGP K EV +EP KF+P
Sbjct: 208 YKEPERPTAPSAA---------------KGPAKAE----------EVVDEPEP---KFNP 239
Query: 244 FTGSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNAN 303
FTGSGR L+G+ SS P NG + SSS + + GKLVFG+N N
Sbjct: 240 FTGSGRRLDGRPLAYEPAPASSSKGKQPVVANGNGQSSVASSSEKATRAQGKLVFGANGN 299
Query: 304 QS-SNGTPKV-LPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
++ PKV K + E + +++PKFQAF+GKKYSLRG
Sbjct: 300 RAPKEAAPKVGAAKETKKEEQEKKDEPKFQAFSGKKYSLRG 340
>gi|242060760|ref|XP_002451669.1| hypothetical protein SORBIDRAFT_04g005550 [Sorghum bicolor]
gi|241931500|gb|EES04645.1| hypothetical protein SORBIDRAFT_04g005550 [Sorghum bicolor]
Length = 313
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/338 (58%), Positives = 236/338 (69%), Gaps = 38/338 (11%)
Query: 8 AAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYC 67
+ FE+ YRCYP SFIDKP LE GDKI+MPPSALDRLA LHIEYPMLFE+ N +A R ++C
Sbjct: 11 STFEQTYRCYPASFIDKPQLEAGDKIIMPPSALDRLASLHIEYPMLFEVHNAAAERTSHC 70
Query: 68 GVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKA 127
GV+EFIA+EG+IY+PYWMM+N+LLQEGD+V +KNA+L KG+YVKLQPHT DFLDISNPKA
Sbjct: 71 GVLEFIAEEGMIYMPYWMMQNLLLQEGDMVFIKNANLPKGTYVKLQPHTTDFLDISNPKA 130
Query: 128 VLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEP 187
+LE TLR++SCLTTGD+IMV YNNKKYYI++VETKPS A+SIIETDCEVDF PPLD+KEP
Sbjct: 131 ILEKTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEP 190
Query: 188 EKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTGS 247
E VK P P+S+ + P E EEP KF PFTGS
Sbjct: 191 EP-------------VK---------PAVPASTEPTTEAPAE--EEP-----KFIPFTGS 221
Query: 248 GRCLNGKSSTQPTVSPSSPLIDNPQQNAANGIN---GSKSSSASSRQKSGKLVFGSNANQ 304
GR L+GK S V SSP Q NA NG+ + S +SSR+ +GKLVFGS
Sbjct: 222 GRRLDGKPSKDKDVQASSPA--KRQANATNGVQPSTATTSQGSSSRKTTGKLVFGSG--- 276
Query: 305 SSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
S G+ + +E PKF AFTGKKYSL+G
Sbjct: 277 -SGGSRTEKAPEKEAKEEPKKEDPKFTAFTGKKYSLKG 313
>gi|294463400|gb|ADE77231.1| unknown [Picea sitchensis]
Length = 314
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/336 (57%), Positives = 238/336 (70%), Gaps = 37/336 (11%)
Query: 9 AFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCG 68
+FE+ YRCYP SFIDKP LE+GDKI+MPPSALDRLA LHI+YPMLFEL N + R ++CG
Sbjct: 12 SFEQSYRCYPASFIDKPQLESGDKIIMPPSALDRLASLHIDYPMLFELHNPATQRRSHCG 71
Query: 69 VMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAV 128
V+EFIA+EG+IY+PYWMM+NMLL+EGD V+VKNA+L KG+YVKLQPHTKDFLDISNPKAV
Sbjct: 72 VLEFIAEEGMIYMPYWMMQNMLLEEGDTVKVKNATLPKGTYVKLQPHTKDFLDISNPKAV 131
Query: 129 LETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPE 188
LETTLR++SCLTTGD+IMV YNNKKYYI+++E+KP++A++IIETDCEVDF PPLD+KEPE
Sbjct: 132 LETTLRNFSCLTTGDSIMVAYNNKKYYIDIIESKPASAITIIETDCEVDFAPPLDYKEPE 191
Query: 189 KPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVK--EEPPKKIAKFSPFTG 246
+ P P+ ++ + T E K EEP KF+PFTG
Sbjct: 192 RV-----------------------PAVPAPAAKTTATQEESKDVEEP-----KFTPFTG 223
Query: 247 SGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASS-RQKSGKLVFGSNANQS 305
GR L+GK P +PL + N +G SS+ +S R SGKLVFGS +
Sbjct: 224 VGRRLDGK----PLKYSVAPLTETTSHLTNNKTSGPGSSAGTSQRHASGKLVFGSGTGST 279
Query: 306 SNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
S K K E P+ E+PKFQAFTGKKYSL+
Sbjct: 280 SADASKEAVKEVKQEVPK--EEPKFQAFTGKKYSLK 313
>gi|222354865|gb|ACM48193.1| ubiquitin fusion degradation 1 protein [Triticum aestivum]
Length = 323
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/344 (55%), Positives = 235/344 (68%), Gaps = 34/344 (9%)
Query: 4 NHHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGR 63
+H + FE+ YRCYP SF DKPHLE GDK++MPPSALDRLA LHIEYPMLFEL N R
Sbjct: 7 GYHASNFEQTYRCYPASFFDKPHLEGGDKVIMPPSALDRLASLHIEYPMLFELHNGVTDR 66
Query: 64 VTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDIS 123
+++CGV+EF+A+EG+I +PYWMM+NMLLQEGDIV VKNA+L KG+YVKLQPHT DFLDIS
Sbjct: 67 ISHCGVLEFVAEEGMIIMPYWMMQNMLLQEGDIVRVKNATLPKGTYVKLQPHTTDFLDIS 126
Query: 124 NPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLD 183
NPKA+LE TLR++SCLTTGD+IMV YNNK+YYI++VE KP++AVSIIETDCEVDF PPLD
Sbjct: 127 NPKAILEKTLRNFSCLTTGDSIMVAYNNKQYYIDIVEAKPASAVSIIETDCEVDFAPPLD 186
Query: 184 FKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSP 243
+KEPEKP P P+ + + V++EP KF P
Sbjct: 187 YKEPEKPQR---------------------PIVPAGKAPAEDQEVIVEDEP-----KFKP 220
Query: 244 FTGSGRCLNGKSSTQP------TVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLV 297
FTGSG+ L+GK QP + + + + A +S S+RQK+GKLV
Sbjct: 221 FTGSGKRLDGKGPKQPAPGASSATAAARSAPSDSNKRANQQTASPSGASTSTRQKTGKLV 280
Query: 298 FGSNANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
FGS+A+ + P S EPP+ EE PKF AFTGK YSL+
Sbjct: 281 FGSSASSKKEAEAQKEPAKGS-EPPKKEE-PKFNAFTGKSYSLK 322
>gi|238013196|gb|ACR37633.1| unknown [Zea mays]
gi|413926362|gb|AFW66294.1| ubiquitin fusion degradation protein 1 [Zea mays]
Length = 310
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/338 (58%), Positives = 235/338 (69%), Gaps = 41/338 (12%)
Query: 8 AAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYC 67
+ FE+ YRCYP SFIDKP LE GDKI+MPPSALDRLA LHIEYPMLFE+ N +A R ++C
Sbjct: 11 STFEQTYRCYPASFIDKPQLEAGDKIIMPPSALDRLASLHIEYPMLFEVHNAAAERTSHC 70
Query: 68 GVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKA 127
GV+EFIA+EG+IY+PYWMM+N+LLQEGD+V +KNA+L KG+YVKLQPHT DFLDISNPKA
Sbjct: 71 GVLEFIAEEGMIYMPYWMMQNLLLQEGDMVFIKNANLPKGTYVKLQPHTTDFLDISNPKA 130
Query: 128 VLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEP 187
+LE TLR++SCLTTGD+IMV YNNKKYYI++VETKPS A+SIIETDCEVDF PPLD+KEP
Sbjct: 131 ILEKTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEP 190
Query: 188 EKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTGS 247
E VK P P+S+ P E EEP KF PFTGS
Sbjct: 191 EP-------------VK---------PAVPASTEPGTDVPAE--EEP-----KFIPFTGS 221
Query: 248 GRCLNGKSSTQPTVSPSSPLIDNPQQNAANGIN---GSKSSSASSRQKSGKLVFGSNANQ 304
GR L+GK S V SSP Q NA NG+ + S +SSR+ +GKLVFGS N+
Sbjct: 222 GRRLDGKPSKDKDVLASSPA--KRQANATNGVQPSTATTSQGSSSRKATGKLVFGSGGNR 279
Query: 305 SSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
+ K + + PKF AFTGKKYSL+G
Sbjct: 280 AEKAPEKEAEEPKKED-------PKFAAFTGKKYSLKG 310
>gi|116309678|emb|CAH66726.1| H0404F02.2 [Oryza sativa Indica Group]
gi|125549426|gb|EAY95248.1| hypothetical protein OsI_17067 [Oryza sativa Indica Group]
Length = 320
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/344 (56%), Positives = 244/344 (70%), Gaps = 39/344 (11%)
Query: 5 HHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRV 64
+H + FE+ YRCYP SF DKPHLE GDK++MPPSALDRLA LHIEYPMLFEL N + R+
Sbjct: 8 YHGSNFEQTYRCYPASFFDKPHLEGGDKVIMPPSALDRLASLHIEYPMLFELHNDATQRI 67
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
++CGV+EF+A+EG+I +PYWMM+NMLLQEGD V VKN +L KG+YVKLQPHT DFLDISN
Sbjct: 68 SHCGVLEFVAEEGMIIMPYWMMQNMLLQEGDTVRVKNTTLPKGTYVKLQPHTTDFLDISN 127
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDF 184
PKA+LE TLR++SCLTTGD+IMV YNNK+YYI++VETKP++AVSIIETDCEVDF PPLD+
Sbjct: 128 PKAILEKTLRNFSCLTTGDSIMVAYNNKQYYIDIVETKPASAVSIIETDCEVDFAPPLDY 187
Query: 185 KEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPF 244
KEPE P + P P+S + + +V +E KF PF
Sbjct: 188 KEPENP---------------------QQPSVPASEATAEDENAKVGDE-----LKFRPF 221
Query: 245 TGSGRCLNGKSSTQ-----PTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFG 299
TGSG+ L+GK+S P+ S SSP N + N S +S S+RQKSGKLVFG
Sbjct: 222 TGSGKRLDGKASKLQATEVPSASRSSPSDSNKRVNQETLAPASSGASNSTRQKSGKLVFG 281
Query: 300 SNANQSSNGTPKVLPKSS--SGEPPQVEEKPKFQAFTGKKYSLR 341
S+AN +N P+ K+S E P+ +E PKFQAF+GK YSL+
Sbjct: 282 SSAN--NNKEPQ---KASVKDDESPKKDE-PKFQAFSGKSYSLK 319
>gi|449461623|ref|XP_004148541.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Cucumis
sativus]
gi|449520152|ref|XP_004167098.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Cucumis
sativus]
Length = 322
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 243/345 (70%), Gaps = 37/345 (10%)
Query: 5 HHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRV 64
+ +FE+ Y+C+ SFIDKPHLE GD+I+MPPSALDRLA L I+YPMLFEL N + RV
Sbjct: 8 YRGTSFEQSYQCFSTSFIDKPHLETGDRIIMPPSALDRLASLQIDYPMLFELRNDAVERV 67
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
++CGV+EF+A+EG+IY+PYWMMENM+LQEGD+V VKN +L KG+YVKLQPHTKDFLDISN
Sbjct: 68 SHCGVLEFVAEEGMIYMPYWMMENMVLQEGDLVRVKNVTLPKGTYVKLQPHTKDFLDISN 127
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDF 184
PKA+LETTLR++SCLTTGD+IMV YNNKKYYI++VETKPS A+SIIETDCEVDF PPLD+
Sbjct: 128 PKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDY 187
Query: 185 KEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPF 244
KEPEK + + KG E+ + + P+ + EP KFS F
Sbjct: 188 KEPEKLVAPT-----------------KGKEQVAEA-------PDSEAEP-----KFSAF 218
Query: 245 TGSGRCLNGKSST-QPTVSPSSPLIDNPQQNAANGINGSKSSSASS------RQKSGKLV 297
TG+GR L+GKSS QP SS D Q ++ ++ S+ SS RQ GKLV
Sbjct: 219 TGTGRRLDGKSSNHQPQPISSSRSADAKQSGGSSRYGHAQQSAGSSSSVNGIRQSQGKLV 278
Query: 298 FGSNANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
FG NAN++ TPK K S + + ++ PKFQ F GK+YSLRG
Sbjct: 279 FGQNANRNPKETPKEASKESKKDEAE-KDNPKFQPFAGKRYSLRG 322
>gi|125591368|gb|EAZ31718.1| hypothetical protein OsJ_15868 [Oryza sativa Japonica Group]
Length = 384
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/344 (56%), Positives = 245/344 (71%), Gaps = 39/344 (11%)
Query: 5 HHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRV 64
+H + FE+ YRCYP SF DKPHLE GDK++MPPSALDRLA LHIEYPMLFEL N + R+
Sbjct: 72 YHGSNFEQTYRCYPASFFDKPHLEGGDKVIMPPSALDRLASLHIEYPMLFELHNDATQRI 131
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
++CGV+EF+A+EG+I +PYWMM+NMLLQEGD V VKN +L KG+YVKLQPHT DFLDISN
Sbjct: 132 SHCGVLEFVAEEGMIIMPYWMMQNMLLQEGDTVRVKNTTLPKGTYVKLQPHTTDFLDISN 191
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDF 184
PKA+LE TLR++SCLTTGD+IMV YNNK+YYI++VETKP++AVSIIETDCEVDF PPLD+
Sbjct: 192 PKAILEKTLRNFSCLTTGDSIMVAYNNKQYYIDIVETKPASAVSIIETDCEVDFAPPLDY 251
Query: 185 KEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPF 244
KEPE P + P P+S + + +V++E KF PF
Sbjct: 252 KEPENP---------------------QQPSVPASEATAEDENAKVEDE-----LKFKPF 285
Query: 245 TGSGRCLNGKSSTQ-----PTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFG 299
TGSG+ L+GK+S P+ S SSP N + N S +S S+RQKSGKLVFG
Sbjct: 286 TGSGKRLDGKASKLQATEVPSASRSSPSDSNKRVNQETLAPASSGASNSTRQKSGKLVFG 345
Query: 300 SNANQSSNGTPKVLPKSS--SGEPPQVEEKPKFQAFTGKKYSLR 341
S+AN +N P+ K+S E P+ +E PKFQAF+GK YSL+
Sbjct: 346 SSAN--NNKEPQ---KASVKDDESPKKDE-PKFQAFSGKSYSLK 383
>gi|226505988|ref|NP_001149183.1| LOC100282805 [Zea mays]
gi|195625298|gb|ACG34479.1| ubiquitin fusion degradation protein 1 [Zea mays]
Length = 310
Score = 369 bits (947), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 196/338 (57%), Positives = 235/338 (69%), Gaps = 41/338 (12%)
Query: 8 AAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYC 67
+ FE+ YRCYP SFIDKP LE GDKI+MPPSALDRLA LHIEYPMLFE+ N +A R ++C
Sbjct: 11 STFEQTYRCYPASFIDKPQLEAGDKIIMPPSALDRLASLHIEYPMLFEVHNAAAERTSHC 70
Query: 68 GVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKA 127
GV+EFIA+EG+IY+PYWMM+N+LLQEGD+V +KNA+L KG+YVKLQPHT DFLDISNPKA
Sbjct: 71 GVLEFIAEEGMIYMPYWMMQNLLLQEGDMVFIKNANLPKGTYVKLQPHTTDFLDISNPKA 130
Query: 128 VLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEP 187
+LE TLR++SCLTTGD+IMV YNNKKYYI++VETKPS A+SIIETDCEVDF PPLD+KEP
Sbjct: 131 ILEKTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEP 190
Query: 188 EKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTGS 247
E VK P P+S+ P E EEP KF PFTGS
Sbjct: 191 EP-------------VK---------PAVPASTEPGTDVPAE--EEP-----KFIPFTGS 221
Query: 248 GRCLNGKSSTQPTVSPSSPLIDNPQQNAANGIN---GSKSSSASSRQKSGKLVFGSNANQ 304
GR L+GK S V SSP Q NA NG+ + S +SSR+ +GKLVFGS ++
Sbjct: 222 GRRLDGKPSKDKDVLASSPA--KRQANATNGVQPSTATTSQGSSSRKATGKLVFGSGGSR 279
Query: 305 SSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
+ K + + PKF AFTGKKYSL+G
Sbjct: 280 AEKAPEKEAEEPKKED-------PKFAAFTGKKYSLKG 310
>gi|297797880|ref|XP_002866824.1| ubiquitin fusion degradation UFD1 family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297312660|gb|EFH43083.1| ubiquitin fusion degradation UFD1 family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 313
Score = 369 bits (947), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 188/345 (54%), Positives = 235/345 (68%), Gaps = 46/345 (13%)
Query: 5 HHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRV 64
+H FE+ YRCYP SFIDKP +E+G KI+MPPSALDRLA LHI+YPMLFEL N S RV
Sbjct: 8 YHRTTFEQTYRCYPSSFIDKPQIESGGKIIMPPSALDRLASLHIDYPMLFELRNASTDRV 67
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
++CGV+EFIA+EG+IY+PYWMM+N+LLQEG+IV V+N +L KG+YVKLQPHT DFLDI+N
Sbjct: 68 SHCGVLEFIAEEGVIYMPYWMMQNLLLQEGNIVRVRNVTLPKGTYVKLQPHTTDFLDIAN 127
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDF 184
PKA+LET LR+YSCLT GD+IMVPYNNKKY+I++VE KPS +SIIETDCEVDF PPLD+
Sbjct: 128 PKAILETALRNYSCLTVGDSIMVPYNNKKYFIDIVEAKPSNCISIIETDCEVDFAPPLDY 187
Query: 185 KEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPF 244
K+PE+P P KG K + +++ P KF+PF
Sbjct: 188 KDPERPVV---------------PASAKGQAKANEVAVAEAEP------------KFNPF 220
Query: 245 TGSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSA-------SSRQKSGKLV 297
TGSGR L+G+ PL PQ AAN NG S A +++Q GKLV
Sbjct: 221 TGSGRRLDGR-----------PLSYEPQPVAANS-NGQSHSVASSSGSEKATQQTQGKLV 268
Query: 298 FGSNANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
FGS+ N+++ T KV + + E+K KF AF+GKKYSLRG
Sbjct: 269 FGSHVNRATKETTKVGAGKDRKQEEEAEKKDKFNAFSGKKYSLRG 313
>gi|115460058|ref|NP_001053629.1| Os04g0577000 [Oryza sativa Japonica Group]
gi|38345534|emb|CAD41304.2| OSJNBa0020J04.9 [Oryza sativa Japonica Group]
gi|113565200|dbj|BAF15543.1| Os04g0577000 [Oryza sativa Japonica Group]
Length = 320
Score = 368 bits (945), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 195/344 (56%), Positives = 242/344 (70%), Gaps = 39/344 (11%)
Query: 5 HHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRV 64
+H + FE+ YRCYP SF DKPHLE GDK++MPPSALDRLA LHIEYPMLFEL N + R+
Sbjct: 8 YHGSNFEQTYRCYPASFFDKPHLEGGDKVIMPPSALDRLASLHIEYPMLFELHNDATQRI 67
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
++CGV+EF+A+EG+I +PYWMM+NMLLQEGD V VKN +L KG+YVKLQPHT DFLDISN
Sbjct: 68 SHCGVLEFVAEEGMIIMPYWMMQNMLLQEGDTVRVKNTTLPKGTYVKLQPHTTDFLDISN 127
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDF 184
PKA+LE TLR SC+TTGD+IMV YNNK+YYI++VETKP++AVSIIETDCEVDF PPLD+
Sbjct: 128 PKAILEKTLRKLSCITTGDSIMVAYNNKQYYIDIVETKPASAVSIIETDCEVDFAPPLDY 187
Query: 185 KEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPF 244
KEPE P P P+S + + +V++E KF PF
Sbjct: 188 KEPENPQQ---------------------PSVPASEATAEDENAKVEDE-----LKFKPF 221
Query: 245 TGSGRCLNGKSSTQ-----PTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFG 299
TGSG+ L+GK+S P+ S SSP N + N S +S S+RQKSGKLVFG
Sbjct: 222 TGSGKRLDGKASKLQATEVPSASRSSPSDSNKRVNQETLAPASSGASNSTRQKSGKLVFG 281
Query: 300 SNANQSSNGTPKVLPKSS--SGEPPQVEEKPKFQAFTGKKYSLR 341
S+AN +N P+ K+S E P+ +E PKFQAF+GK YSL+
Sbjct: 282 SSAN--NNKEPQ---KASVKDDESPKKDE-PKFQAFSGKSYSLK 319
>gi|46452265|gb|AAS98216.1| ubiquitin fusion degradation protein [Triticum aestivum]
Length = 317
Score = 367 bits (942), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 199/341 (58%), Positives = 244/341 (71%), Gaps = 36/341 (10%)
Query: 5 HHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRV 64
+ + FE+ YRCYP SFIDKP LE+GDKI+MPPSALDRLA LHIEYPMLFE+ N +A R
Sbjct: 10 YRGSTFEQTYRCYPASFIDKPQLESGDKIIMPPSALDRLASLHIEYPMLFEVRNAAAERT 69
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
++CGV+EFIA+EG+IY+PYW+M+N+LL+EGD+V +KNA+L KG+YVKLQPHT DFLDISN
Sbjct: 70 SHCGVLEFIAEEGMIYMPYWVMQNLLLREGDMVFIKNANLPKGTYVKLQPHTTDFLDISN 129
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDF 184
PKA+LE TLR+YSCLTTGD+IMV YNNK YYI++VETKP++A+SIIETDCEVDF PPLD+
Sbjct: 130 PKAILEETLRNYSCLTTGDSIMVAYNNKGYYIDIVETKPASAISIIETDCEVDFAPPLDY 189
Query: 185 KEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPF 244
KEPE+P P P S+ + E EEP KFSPF
Sbjct: 190 KEPERPK----------------------PTAPPSADPAAEAQDE--EEP-----KFSPF 220
Query: 245 TGSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSS---ASSRQKSGKLVFGSN 301
TG GR L+GK + S SSP Q NA N + S +S+ + R+ +GKLVFGS
Sbjct: 221 TGPGRRLDGKPAKDLDASSSSPA--KRQANATNSVQPSAASTPQITAPRKTTGKLVFGSG 278
Query: 302 ANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
+QSS GT KV P + E P+ EE PKF AFTGKKYSL+G
Sbjct: 279 GSQSSKGTEKV-PDKDAKEDPKKEE-PKFSAFTGKKYSLKG 317
>gi|76160972|gb|ABA40449.1| unknown [Solanum tuberosum]
Length = 316
Score = 365 bits (938), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 203/344 (59%), Positives = 243/344 (70%), Gaps = 41/344 (11%)
Query: 5 HHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRV 64
+H +FE+ YRCYP SFIDKP LENGDKI+MPPSALDRLA LHI+YPMLFEL N S RV
Sbjct: 8 YHGRSFEQTYRCYPASFIDKPQLENGDKIIMPPSALDRLASLHIDYPMLFELRNDSTERV 67
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
++CGV+EFIA+EG+IY+PYWMMEN+ LQEGDIV VKN +L KG YVKLQPHTKDFLDISN
Sbjct: 68 SHCGVLEFIAEEGMIYMPYWMMENLCLQEGDIVTVKNVTLPKGKYVKLQPHTKDFLDISN 127
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDF 184
PKA+LETTLR++SCLTTGD+IMV YNNKKYYI++VETKPS +SIIETDCEVDF PPLD+
Sbjct: 128 PKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNGISIIETDCEVDFAPPLDY 187
Query: 185 KEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPF 244
KEPE+ + P +PS+S P EV+E+ + KF PF
Sbjct: 188 KEPERTA----------------------PSRPSNS------PAEVQEDATEVEPKFYPF 219
Query: 245 TGSGRCLNGKSSTQPTVSPSSPL-IDNPQQNAANGINGSKSSSA-----SSRQKSGKLVF 298
TG R L+GK Q PSS + Q N NG G KS++A SSRQ GKLVF
Sbjct: 220 TGGARRLDGKPLKQQLPPPSSSSGYSDKQVNVTNG--GKKSAAAPSSQNSSRQSQGKLVF 277
Query: 299 GSNANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
GSNAN++ + + + +E+PKFQAF+GKKYSLRG
Sbjct: 278 GSNANRAPEKQKEPVKEEPP-----KKEEPKFQAFSGKKYSLRG 316
>gi|255646036|gb|ACU23505.1| unknown [Glycine max]
Length = 316
Score = 365 bits (937), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 192/339 (56%), Positives = 244/339 (71%), Gaps = 31/339 (9%)
Query: 5 HHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRV 64
+H +FE+ YRCYP SFI+KP +E+GDKI+MPPSALDRLA LHI+YPMLFEL N +A RV
Sbjct: 8 YHGTSFEQIYRCYPASFIEKPQIESGDKIIMPPSALDRLASLHIDYPMLFELRNDAAERV 67
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
++CGV+EFIA+EG+IY+PYWMMENMLLQEGDIV+VKN +L KG+YVKLQPHTKDFLDIS+
Sbjct: 68 SHCGVLEFIAEEGMIYMPYWMMENMLLQEGDIVKVKNVTLPKGTYVKLQPHTKDFLDISD 127
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDF 184
PKA+LETTLR++SCLTTGD+IMV YNNKKYYI+++ETKP TA+SIIETDCEVDF PPLD+
Sbjct: 128 PKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPDTAISIIETDCEVDFAPPLDY 187
Query: 185 KEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPF 244
KEPEKP++ P ++++ P ++EP KF+PF
Sbjct: 188 KEPEKPTA---------------------PLSAGKAAVAAEVIP-AEDEP-----KFNPF 220
Query: 245 TGSGRCLNGK-SSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNAN 303
+G+GR L+GK + QP S D + + SS +++RQ GKLVFGSNAN
Sbjct: 221 SGTGRRLDGKPLNYQPPPVSFSGFKDQKPDVVNLQFSTAFSSQSNARQSQGKLVFGSNAN 280
Query: 304 QSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
++ T K + +E+PKFQ F+GKKYSLRG
Sbjct: 281 RTKE-TGKAKESKPEPP--KEKEEPKFQPFSGKKYSLRG 316
>gi|222354863|gb|ACM48192.1| ubiquitin fusion degradation 1 protein [Triticum aestivum]
Length = 317
Score = 364 bits (934), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 200/341 (58%), Positives = 245/341 (71%), Gaps = 36/341 (10%)
Query: 5 HHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRV 64
+ + FE+ YRCYP SFIDKP LE+GDKI+MPPSALDRLA LHIEYPMLFE+ NT+A R
Sbjct: 10 YRGSIFEQTYRCYPASFIDKPQLESGDKIIMPPSALDRLASLHIEYPMLFEVRNTAAERT 69
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
++CGV+EFIA+EG+IY+PYWMM+N+LLQEGD+V +KNA+L KG+YVKLQPHT DFLDISN
Sbjct: 70 SHCGVLEFIAEEGMIYMPYWMMQNLLLQEGDMVFIKNANLPKGTYVKLQPHTTDFLDISN 129
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDF 184
PKA+LE TLR+YSCLTTGD+IMV YNNKKYYI++VETKP++A+SIIETDCEVDF PPLD+
Sbjct: 130 PKAILEKTLRNYSCLTTGDSIMVAYNNKKYYIDIVETKPASAISIIETDCEVDFAPPLDY 189
Query: 185 KEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPF 244
KEPE+P P P S+ + +V+EEP KFSPF
Sbjct: 190 KEPERPK----------------------PTAPPSADPAAEA--QVEEEP-----KFSPF 220
Query: 245 TGSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSS---ASSRQKSGKLVFGSN 301
TG GR L+GK + S SSP Q NA N + S SS+ + R+ +GKLVFGS
Sbjct: 221 TGPGRRLDGKPAKDLDASSSSPA--KRQANATNSVQPSASSTPQITAPRKTTGKLVFGSG 278
Query: 302 ANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
+QSS GT KV + +E+PKF AFTGKKYSL+G
Sbjct: 279 GSQSSKGTEKV--PEKDAKEEPKKEEPKFSAFTGKKYSLKG 317
>gi|356513060|ref|XP_003525232.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Glycine
max]
Length = 316
Score = 363 bits (931), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 194/339 (57%), Positives = 245/339 (72%), Gaps = 31/339 (9%)
Query: 5 HHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRV 64
+H +FE+ YRCYP SFI+KP +E+GDKI+MPPSALDRLA LHI+YPMLFEL N +A RV
Sbjct: 8 YHGTSFEQIYRCYPASFIEKPQIESGDKIIMPPSALDRLASLHIDYPMLFELRNDAAERV 67
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
++CGV+EFIA+EG+IY+PYWMMENMLLQEGDIV+VKN +L KG+YVKLQPHTKDFLDISN
Sbjct: 68 SHCGVLEFIAEEGMIYMPYWMMENMLLQEGDIVKVKNVTLPKGTYVKLQPHTKDFLDISN 127
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDF 184
PKA+LETTLR++SCLTTGD+IMV YNNKKYYI+++ETKP TA+SIIETDCEVDF PPLD+
Sbjct: 128 PKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPDTAISIIETDCEVDFAPPLDY 187
Query: 185 KEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPF 244
KEPEKP++ P ++++ P ++EP KF+PF
Sbjct: 188 KEPEKPTA---------------------PLSAGKAAVAAEVIP-AEDEP-----KFNPF 220
Query: 245 TGSGRCLNGKS-STQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNAN 303
+G+GR L+GK + QP SS D + + SS +++RQ GKLVFGSNAN
Sbjct: 221 SGTGRRLDGKPLNYQPPPVSSSGSKDQKPDVVNLQSSTASSSQSNARQSQGKLVFGSNAN 280
Query: 304 QSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
++ T K + +E+PKFQ F+GKKYSLRG
Sbjct: 281 RTKE-TGKAKESKPEPP--KEKEEPKFQPFSGKKYSLRG 316
>gi|42573225|ref|NP_974709.1| ubiquitin fusion degradation UFD1 family protein [Arabidopsis
thaliana]
gi|4539312|emb|CAB38813.1| putative ubiquitin-dependent proteolytic protein [Arabidopsis
thaliana]
gi|7270876|emb|CAB80556.1| putative ubiquitin-dependent proteolytic protein [Arabidopsis
thaliana]
gi|332661595|gb|AEE86995.1| ubiquitin fusion degradation UFD1 family protein [Arabidopsis
thaliana]
Length = 315
Score = 360 bits (923), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 187/347 (53%), Positives = 231/347 (66%), Gaps = 48/347 (13%)
Query: 5 HHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRV 64
+H FE+ YRCYP SFIDKP +E+GDKI+MPPSALDRLA L I+YPMLFEL N S
Sbjct: 8 YHGTTFEQTYRCYPSSFIDKPQIESGDKIIMPPSALDRLASLQIDYPMLFELRNASTDSF 67
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
++CGV+EFIA+EG+IY+PYWMM+N+LLQEGD+V V+N +L KG+YVKLQPHT DFLDI+N
Sbjct: 68 SHCGVLEFIAEEGVIYIPYWMMQNLLLQEGDMVRVRNVTLPKGTYVKLQPHTTDFLDIAN 127
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDF 184
PKA+LET LR+YSCLT GD+IMVPYNNKKY+I++VE KPS +SIIETDCEVDF PPLD+
Sbjct: 128 PKAILETALRNYSCLTVGDSIMVPYNNKKYFIDIVEAKPSNGISIIETDCEVDFAPPLDY 187
Query: 185 KEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPF 244
KEPE+P + P KG K ++ P KF+PF
Sbjct: 188 KEPERPVA---------------PAPAKGEAKAKEVDVAEAEP------------KFNPF 220
Query: 245 TGSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSA---------SSRQKSGK 295
TGSGR L+G+ PL PQ AAN NG A +++Q GK
Sbjct: 221 TGSGRRLDGR-----------PLSYEPQPGAANS-NGQSHPVASSSSSGSEKATQQNRGK 268
Query: 296 LVFGSNANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
LVFGSN +S+ T KV + + E++ KFQAF+GKKYSLRG
Sbjct: 269 LVFGSNVERSTKETTKVGAGKDRKQEEEAEKEAKFQAFSGKKYSLRG 315
>gi|255637543|gb|ACU19098.1| unknown [Glycine max]
Length = 316
Score = 359 bits (921), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 194/339 (57%), Positives = 241/339 (71%), Gaps = 31/339 (9%)
Query: 5 HHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRV 64
+H +FE+ YRCYP SFI+KP +E+GDKI+MPPSALDRLA LHI+YPMLFEL N +A RV
Sbjct: 8 YHGTSFEQIYRCYPASFIEKPQIESGDKIIMPPSALDRLASLHIDYPMLFELRNDAAERV 67
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
++CGV+EFIA+EG+IY+PYWMMENMLLQEGDIV+VKN +L KG+YVKLQPHTKDFLDISN
Sbjct: 68 SHCGVLEFIAEEGMIYMPYWMMENMLLQEGDIVKVKNVTLPKGTYVKLQPHTKDFLDISN 127
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDF 184
PKA+LETTLR++SCLTTGD+IMV YNNKKYYI+++ETKP A+SIIETDCEVDF PPLD+
Sbjct: 128 PKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPDNAISIIETDCEVDFAPPLDY 187
Query: 185 KEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPF 244
KEPEKP + PL + + + P KFSPF
Sbjct: 188 KEPEKPIA---------------PLSAGKAAVAAEETPAEEEP------------KFSPF 220
Query: 245 TGSGRCLNGK-SSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNAN 303
+G+GR L+GK + QP SS D + + + SS +++RQ GKLVFGSNAN
Sbjct: 221 SGTGRRLDGKPLNYQPPPVSSSGSKDQKSDVVNSLSSTASSSQSNARQSQGKLVFGSNAN 280
Query: 304 QSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
+ +N T K + +E+PKFQ F+GKKYSLRG
Sbjct: 281 R-TNETGKAKESKPEPP--KEKEEPKFQPFSGKKYSLRG 316
>gi|3461847|gb|AAC33233.1| putative ubiquitin fusion-degradation protein [Arabidopsis
thaliana]
Length = 292
Score = 359 bits (921), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 186/315 (59%), Positives = 224/315 (71%), Gaps = 34/315 (10%)
Query: 31 DKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENML 90
++ +MPPSALDRLA LHIEYPMLF+LSN S + ++CGV+EF ADEGL+YLPYWMM+NM
Sbjct: 9 EQFIMPPSALDRLASLHIEYPMLFQLSNVSVEKTSHCGVLEFTADEGLVYLPYWMMQNMS 68
Query: 91 LQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDTIMVPYN 150
L+EGD+++VKN SL KG+Y+KLQPHT+DFLDISNPKA+LETTLRSYSCLTTGDTIMVPYN
Sbjct: 69 LEEGDVMQVKNISLVKGTYIKLQPHTQDFLDISNPKAILETTLRSYSCLTTGDTIMVPYN 128
Query: 151 NKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEKPSSSSLSNRTLPEVKEEPPLD 210
NK+YYINVVE KPS+AVSIIETDCEVDF PPLD+KEPEKP + SN+ +VKEE
Sbjct: 129 NKQYYINVVEAKPSSAVSIIETDCEVDFAPPLDYKEPEKPQKLTPSNKRPLQVKEE---- 184
Query: 211 FKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTGSGRCLNGKSSTQPTVSPSSPLIDN 270
EEP K+ KF+PFTGSG+ L+GK+ TQ P D
Sbjct: 185 ---------------------EEPASKVPKFTPFTGSGKRLDGKAQTQ--TEPE----DT 217
Query: 271 PQQN--AANGINGSKSSSASSRQKSGKLVFGSNANQSSNGTPKV-LPKSSSGEPPQVEEK 327
QQ NG + K S + RQ SGKLVFGSN+ ++ T KV PK+ E ++
Sbjct: 218 KQQEKPTENGKDDEKLSVTTPRQISGKLVFGSNSKSAAKETAKVDDPKNIVQESSTKSDE 277
Query: 328 PKFQAFTGKKYSLRG 342
KF+ FTGKKYSL G
Sbjct: 278 AKFKVFTGKKYSLNG 292
>gi|125538345|gb|EAY84740.1| hypothetical protein OsI_06110 [Oryza sativa Indica Group]
Length = 315
Score = 359 bits (921), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 196/341 (57%), Positives = 240/341 (70%), Gaps = 36/341 (10%)
Query: 5 HHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRV 64
+ + FE+ YRCYP SFIDKP LE GDKI+MPPSALDRLA LHIEYPMLFE+ N +A R
Sbjct: 8 YRGSTFEQTYRCYPASFIDKPQLETGDKIIMPPSALDRLASLHIEYPMLFEVHNAAAERT 67
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
++CGV+EFIA+EG+IY+PYWMM+N+LL EGD+V +KNA+L KG+YVKLQPHT DFLDISN
Sbjct: 68 SHCGVLEFIAEEGMIYMPYWMMQNLLLTEGDMVFIKNANLPKGTYVKLQPHTTDFLDISN 127
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDF 184
PKA+LE TLR+YSCLTTGD+IMV YNNKKYYI++VETKPS A+SIIETDCEVDF PPLD+
Sbjct: 128 PKAILEKTLRNYSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDY 187
Query: 185 KEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPF 244
KEPE+ ++ PP + EE ++ KF PF
Sbjct: 188 KEPERQKAAV------------PP-----------------STAPTAEEAAEEEPKFIPF 218
Query: 245 TGSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGIN---GSKSSSASSRQKSGKLVFGSN 301
TG GR L+GK+ VS SSP Q NA N + S S S+SSR+ +GKLVFG
Sbjct: 219 TGPGRRLDGKAPKDKDVSASSPA--KRQANATNSVQPSTASTSQSSSSRKTTGKLVFGPG 276
Query: 302 ANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
N++S T KV P+ E P+ +E PKF AFTG+KYSL+G
Sbjct: 277 GNRTSKETEKV-PEKEPKEDPKKDE-PKFSAFTGRKYSLKG 315
>gi|356524503|ref|XP_003530868.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Glycine
max]
Length = 316
Score = 357 bits (917), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 193/339 (56%), Positives = 241/339 (71%), Gaps = 31/339 (9%)
Query: 5 HHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRV 64
+H +FE+ YRCYP SFI+KP +E+GDKI+MPPSALDRLA LHI+YPMLFEL N +A RV
Sbjct: 8 YHGTSFEQIYRCYPASFIEKPQIESGDKIIMPPSALDRLASLHIDYPMLFELRNDAAERV 67
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
++CGV+EFIA+EG+IY+PYWMMENMLLQEGDIV+VKN +L KG+YVKLQPHTKDFLDISN
Sbjct: 68 SHCGVLEFIAEEGMIYMPYWMMENMLLQEGDIVKVKNVTLPKGTYVKLQPHTKDFLDISN 127
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDF 184
PKA+LETTLR++SCLTTGD+IMV YNNKKYYI+++ETKP A+SIIETDCEVDF PPLD+
Sbjct: 128 PKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPDNAISIIETDCEVDFAPPLDY 187
Query: 185 KEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPF 244
KEPEKP + PL + + + P KF+PF
Sbjct: 188 KEPEKPIA---------------PLSAGKAAVAAEETPAEEEP------------KFNPF 220
Query: 245 TGSGRCLNGK-SSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNAN 303
+G+GR L+GK + QP SS D + + + SS +++RQ GKLVFGSNAN
Sbjct: 221 SGTGRRLDGKPLNYQPPPVSSSGSKDQKSDVVNSLSSTASSSQSNARQSQGKLVFGSNAN 280
Query: 304 QSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
+ +N T K + +E+PKFQ F+GKKYSLRG
Sbjct: 281 R-TNETGKAKESKPEPP--KEKEEPKFQPFSGKKYSLRG 316
>gi|357472801|ref|XP_003606685.1| Ubiquitin fusion degradation protein-like protein [Medicago
truncatula]
gi|355507740|gb|AES88882.1| Ubiquitin fusion degradation protein-like protein [Medicago
truncatula]
Length = 386
Score = 357 bits (917), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 187/337 (55%), Positives = 235/337 (69%), Gaps = 37/337 (10%)
Query: 6 HDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
H+ FE Y C+P+S + +P LENGDKI+MP SALDRLA L+IEYPMLFEL NTSA R T
Sbjct: 86 HNEIFEHVYSCFPVSSLKRPTLENGDKIIMPSSALDRLARLNIEYPMLFELRNTSAERTT 145
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF ADEG+++LP WMME++LLQEG+IV +K+ SL KG VKLQPH+KDFL+IS+P
Sbjct: 146 HCGVLEFTADEGIVFLPNWMMEDLLLQEGNIVSLKSTSLVKGKCVKLQPHSKDFLEISDP 205
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KA+LET+LRSYSCLTTG TIM+PYNNKKYYI++VETKPS A+SIIETDCEVDF PPLD
Sbjct: 206 KAMLETSLRSYSCLTTGRTIMIPYNNKKYYIDIVETKPSPAISIIETDCEVDFAPPLD-- 263
Query: 186 EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFT 245
+K PEKP S LS++ P+V+EEP K+ + PF+
Sbjct: 264 -------------------------YKEPEKPLPSDLSHKESPQVEEEPAAKVPRLMPFS 298
Query: 246 GSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNANQS 305
G GR L+GK STQ S+P+ P++ + ++S +S + SG LVFGS AN
Sbjct: 299 GIGRRLDGKPSTQLVEQASTPV---PKKQHTD------NNSNNSNRTSGNLVFGSKANAP 349
Query: 306 SNGT-PKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
T PK S+S E + + P+FQAFTGKKYSLR
Sbjct: 350 KVQTQPKAFLNSASQESSKKTDTPQFQAFTGKKYSLR 386
>gi|30684115|ref|NP_180471.2| ubiquitin fusion degradation UFD1-like protein [Arabidopsis
thaliana]
gi|330253113|gb|AEC08207.1| ubiquitin fusion degradation UFD1-like protein [Arabidopsis
thaliana]
Length = 280
Score = 357 bits (916), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 186/311 (59%), Positives = 221/311 (71%), Gaps = 34/311 (10%)
Query: 35 MPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEG 94
MPPSALDRLA LHIEYPMLF+LSN S + ++CGV+EF ADEGL+YLPYWMM+NM L+EG
Sbjct: 1 MPPSALDRLASLHIEYPMLFQLSNVSVEKTSHCGVLEFTADEGLVYLPYWMMQNMSLEEG 60
Query: 95 DIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKY 154
D+++VKN SL KG+Y+KLQPHT+DFLDISNPKA+LETTLRSYSCLTTGDTIMVPYNNK+Y
Sbjct: 61 DVMQVKNISLVKGTYIKLQPHTQDFLDISNPKAILETTLRSYSCLTTGDTIMVPYNNKQY 120
Query: 155 YINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGP 214
YINVVE KPS+AVSIIETDCEVDF PPLD+KEPEKP + SN+ +VKEE
Sbjct: 121 YINVVEAKPSSAVSIIETDCEVDFAPPLDYKEPEKPQKLTPSNKRPLQVKEE-------- 172
Query: 215 EKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTGSGRCLNGKSSTQPTVSPSSPLIDNPQQN 274
EEP K+ KF+PFTGSG+ L+GK+ TQ P D QQ
Sbjct: 173 -----------------EEPASKVPKFTPFTGSGKRLDGKAQTQ--TEPE----DTKQQE 209
Query: 275 --AANGINGSKSSSASSRQKSGKLVFGSNANQSSNGTPKV-LPKSSSGEPPQVEEKPKFQ 331
NG + K S + RQ SGKLVFGSN+ ++ T KV PK+ E ++ KF+
Sbjct: 210 KPTENGKDDEKLSVTTPRQISGKLVFGSNSKSAAKETAKVDDPKNIVQESSTKSDEAKFK 269
Query: 332 AFTGKKYSLRG 342
FTGKKYSL G
Sbjct: 270 VFTGKKYSLNG 280
>gi|18420341|ref|NP_568048.1| ubiquitin fusion degradation UFD1 family protein [Arabidopsis
thaliana]
gi|16930497|gb|AAL31934.1|AF419602_1 AT4g38930/F19H22_30 [Arabidopsis thaliana]
gi|22135779|gb|AAM91046.1| AT4g38930/F19H22_30 [Arabidopsis thaliana]
gi|62320416|dbj|BAD94866.1| putative ubiquitin-dependent proteolytic protein [Arabidopsis
thaliana]
gi|111609942|gb|ABH11521.1| UFD1b [synthetic construct]
gi|332661594|gb|AEE86994.1| ubiquitin fusion degradation UFD1 family protein [Arabidopsis
thaliana]
Length = 311
Score = 357 bits (916), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 185/347 (53%), Positives = 230/347 (66%), Gaps = 52/347 (14%)
Query: 5 HHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRV 64
+H FE+ YRCYP SFIDKP +E+GDKI+MPPSALDRLA L I+YPMLFEL N S
Sbjct: 8 YHGTTFEQTYRCYPSSFIDKPQIESGDKIIMPPSALDRLASLQIDYPMLFELRNASTDSF 67
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
++CGV+EFIA+EG+IY+PYWMM+N+LLQEGD+V V+N +L KG+YVKLQPHT DFLDI+N
Sbjct: 68 SHCGVLEFIAEEGVIYIPYWMMQNLLLQEGDMVRVRNVTLPKGTYVKLQPHTTDFLDIAN 127
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDF 184
PKA+LET LR+YSCLT GD+IMVPYNNKKY+I++VE KPS +SIIETDCEVDF PPLD+
Sbjct: 128 PKAILETALRNYSCLTVGDSIMVPYNNKKYFIDIVEAKPSNGISIIETDCEVDFAPPLDY 187
Query: 185 KEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPF 244
KEPE+P + + + +V E P KF+PF
Sbjct: 188 KEPERPVAPAPAKAKEVDVAEAEP-------------------------------KFNPF 216
Query: 245 TGSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSA---------SSRQKSGK 295
TGSGR L+G+ PL PQ AAN NG A +++Q GK
Sbjct: 217 TGSGRRLDGR-----------PLSYEPQPGAANS-NGQSHPVASSSSSGSEKATQQNRGK 264
Query: 296 LVFGSNANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
LVFGSN +S+ T KV + + E++ KFQAF+GKKYSLRG
Sbjct: 265 LVFGSNVERSTKETTKVGAGKDRKQEEEAEKEAKFQAFSGKKYSLRG 311
>gi|78191476|gb|ABB29959.1| ubiquitin fusion-degradation protein-like [Solanum tuberosum]
Length = 315
Score = 356 bits (914), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 203/344 (59%), Positives = 240/344 (69%), Gaps = 42/344 (12%)
Query: 5 HHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRV 64
+H +FE+ YRCYP SFIDKP LENGDKI+MPPSALDRLA LHI+YPMLFEL NTS RV
Sbjct: 8 YHGRSFEQTYRCYPASFIDKPQLENGDKIIMPPSALDRLASLHIDYPMLFELRNTSTERV 67
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
++CGV+EFIA+EG+IY+PYWMMEN+ LQEGD V VKN +L KG YVKLQPHTKDFLDISN
Sbjct: 68 SHCGVLEFIAEEGMIYMPYWMMENLFLQEGDTVTVKNVTLPKGKYVKLQPHTKDFLDISN 127
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDF 184
PKA+LETTLR++SCLTTGD+IMV YNNKKYYI++VETKPS A+SIIETDCEVDF PPLD+
Sbjct: 128 PKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDY 187
Query: 185 KEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPF 244
KEPE+ + P +PS + P EV+E + KF+PF
Sbjct: 188 KEPERVA----------------------PSRPS------KAPAEVEEAAAEVEPKFNPF 219
Query: 245 TGSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSAS------SRQKSGKLVF 298
TG R L+GK Q SS D Q + NG G K + A+ SRQ GKLVF
Sbjct: 220 TGGARRLDGKPLKQEPPPSSSGSXDK-QVDVTNG--GKKFADAASSSQNSSRQSQGKLVF 276
Query: 299 GSNANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
GSNAN++ K E P +E+PKFQAF+GKKYSLRG
Sbjct: 277 GSNANRAPEKQ-----KEPVKEEPPKKEEPKFQAFSGKKYSLRG 315
>gi|115444631|ref|NP_001046095.1| Os02g0181800 [Oryza sativa Japonica Group]
gi|49388027|dbj|BAD25143.1| putative ubiquitin fusion degradation protein [Oryza sativa
Japonica Group]
gi|113535626|dbj|BAF08009.1| Os02g0181800 [Oryza sativa Japonica Group]
gi|125581047|gb|EAZ21978.1| hypothetical protein OsJ_05633 [Oryza sativa Japonica Group]
Length = 315
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 195/341 (57%), Positives = 239/341 (70%), Gaps = 36/341 (10%)
Query: 5 HHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRV 64
+ + FE+ YRCYP SFIDKP LE GDKI+MPPSALDRLA LHIEYPMLFE+ N +A R
Sbjct: 8 YRGSTFEQTYRCYPASFIDKPQLETGDKIIMPPSALDRLASLHIEYPMLFEVHNAAAERT 67
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
++CGV+EFIA+EG+IY+PYWMM+N+LL EGD+V +KNA+L KG+YVKLQPHT DFLDISN
Sbjct: 68 SHCGVLEFIAEEGMIYMPYWMMQNLLLTEGDMVFIKNANLPKGTYVKLQPHTTDFLDISN 127
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDF 184
PKA+LE TLR+YSCLTTGD+IMV YNNKKYYI++VETKPS A+SIIETDCEVDF PPLD+
Sbjct: 128 PKAILEKTLRNYSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDY 187
Query: 185 KEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPF 244
KEPE+ ++ PP + EE ++ KF PF
Sbjct: 188 KEPERQKAAV------------PP-----------------STAPTAEEAAEEEPKFIPF 218
Query: 245 TGSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGIN---GSKSSSASSRQKSGKLVFGSN 301
TG GR L+GK+ VS SSP Q NA N + S S S+SSR+ + KLVFG
Sbjct: 219 TGPGRRLDGKAPKDKDVSASSPA--KRQANATNSVQPSTASTSQSSSSRKTTEKLVFGPG 276
Query: 302 ANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
N++S T KV P+ E P+ +E PKF AFTG+KYSL+G
Sbjct: 277 GNRTSKETEKV-PEKEPKEDPKKDE-PKFSAFTGRKYSLKG 315
>gi|357472795|ref|XP_003606682.1| Ubiquitin fusion degradation protein-like protein [Medicago
truncatula]
gi|355507737|gb|AES88879.1| Ubiquitin fusion degradation protein-like protein [Medicago
truncatula]
Length = 419
Score = 350 bits (897), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 186/336 (55%), Positives = 232/336 (69%), Gaps = 37/336 (11%)
Query: 7 DAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
D FE+ Y C PIS + +P LENGDKI+MP SALD LA L+IEYPMLFEL NTSA R T+
Sbjct: 120 DETFEQFYSCLPISSLKRPTLENGDKIIMPSSALDSLARLNIEYPMLFELRNTSAERTTH 179
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
CGV+EF ADEG+++LP WMME++ LQEG+IV +K+ SL KG +VKLQPH+KDFL+IS+PK
Sbjct: 180 CGVLEFTADEGIVFLPNWMMEDLFLQEGNIVSLKSTSLVKGKFVKLQPHSKDFLEISDPK 239
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
A+LET+LRSYSCLTTG TIM+PYN KKYYI+VVETKPS A+SIIETDCEVDF PPLD
Sbjct: 240 AMLETSLRSYSCLTTGRTIMIPYNKKKYYIDVVETKPSPAISIIETDCEVDFAPPLD--- 296
Query: 187 PEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTG 246
+K PEKP S LS++ P +V+EE K + PF+G
Sbjct: 297 ------------------------YKEPEKPLPSDLSHKKPLQVEEERAAKAPRLMPFSG 332
Query: 247 SGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNANQSS 306
GR L+GK STQ S+P+ P++ ++++S +S + SGKLVFGS AN
Sbjct: 333 IGRRLDGKPSTQSVEQASTPV---PKKQH------TENNSNNSNRTSGKLVFGSKANAPK 383
Query: 307 NGT-PKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
T PK S+S E + + P+FQAFTGKKYSLR
Sbjct: 384 VQTQPKAFLNSASQESSKKTDTPQFQAFTGKKYSLR 419
>gi|321149977|gb|ADW66136.1| ubiquitin fusion degradation protein 1 [Solanum nigrum]
Length = 292
Score = 347 bits (891), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 191/327 (58%), Positives = 222/327 (67%), Gaps = 40/327 (12%)
Query: 15 RCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIA 74
RCYP SFIDKP LENGDKI+MPPSALDRLA LHI+YPMLFEL NTS RV++CGV+EFIA
Sbjct: 1 RCYPASFIDKPQLENGDKIIMPPSALDRLASLHIDYPMLFELRNTSTERVSHCGVLEFIA 60
Query: 75 DEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLR 134
+EG++Y+PYWMMEN+ LQEGDIV VKN +L KG YVKLQPHTKDFLDISNPKA+LETTLR
Sbjct: 61 EEGMVYMPYWMMENLCLQEGDIVTVKNVTLPKGKYVKLQPHTKDFLDISNPKAILETTLR 120
Query: 135 SYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEKPSSSS 194
++SCLTTGD+IMV YNNKKYYI++VETKPS +SIIETDCEVDF PPLD+KEPE+ +
Sbjct: 121 NFSCLTTGDSIMVAYNNKKYYIDIVETKPSNGISIIETDCEVDFAPPLDYKEPERAA--- 177
Query: 195 LSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTGSGRCLNGK 254
P +PS + E KF+PFTG R L+GK
Sbjct: 178 -------------------PSRPSKAPAEVEEAATEVE------PKFNPFTGGARRLDGK 212
Query: 255 SSTQPTVSPSSPLIDNPQQNAANGINGSK-----SSSASSRQKSGKLVFGSNANQSSNGT 309
SS + Q N NG G K SS SSRQ GKLVFGSNAN++
Sbjct: 213 PLKHQPPPSSSSGSSDKQVNVTNG--GKKSAAASSSQNSSRQSQGKLVFGSNANRAPEKQ 270
Query: 310 PKVLPKSSSGEPPQVEEKPKFQAFTGK 336
K E PQ +E+PKFQAF+GK
Sbjct: 271 -----KEPVKEEPQKKEEPKFQAFSGK 292
>gi|242059387|ref|XP_002458839.1| hypothetical protein SORBIDRAFT_03g041250 [Sorghum bicolor]
gi|241930814|gb|EES03959.1| hypothetical protein SORBIDRAFT_03g041250 [Sorghum bicolor]
Length = 331
Score = 347 bits (890), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 189/350 (54%), Positives = 242/350 (69%), Gaps = 40/350 (11%)
Query: 5 HHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFE--LSNTSAG 62
+H +F + YRCYP SF+ KPHLE GDK++MP SALD LA LHIEYPMLFE L N +A
Sbjct: 8 YHRNSFAQIYRCYPPSFVGKPHLEGGDKVIMPQSALDCLASLHIEYPMLFEFELHNDAAA 67
Query: 63 ---RVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDF 119
RV++CGV+EF+A+EG+I +PYWMM+NM L+EGDIV VKNA+L KG+Y KLQPHT DF
Sbjct: 68 TQQRVSHCGVLEFVAEEGMIIMPYWMMQNMRLEEGDIVHVKNAALPKGTYAKLQPHTSDF 127
Query: 120 LDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFI 179
LDISNPK VLE TLR++SCLTTGDTIMV YN+K+YYI++VETKP++AV IIETDCEVDF
Sbjct: 128 LDISNPKVVLEKTLRNFSCLTTGDTIMVSYNSKQYYIDIVETKPASAVCIIETDCEVDFA 187
Query: 180 PPLDFKEP-EKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKI 238
PPLD+KEP EKP S++ LP + P ++ N T V++EP
Sbjct: 188 PPLDYKEPAEKPRQSTV----LPASNKAP-----------AAGDGNTT--AVEDEP---- 226
Query: 239 AKFSPFTGSGRCLNGKSS------TQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQK 292
KF PFTGSG+ L+GK+S P + S+P N + N + S SRQK
Sbjct: 227 -KFKPFTGSGKRLDGKASKLQASDQVPNTAISAPSGSNKRANQQISAPAASVGSNYSRQK 285
Query: 293 SGKLVFGSNANQSSNGTPKVLPKS-SSGEPPQVEEKPKFQAFTGKKYSLR 341
+GKLVFGS+A+ + K L K+ + E P +++P+FQAF+GK YSL+
Sbjct: 286 AGKLVFGSSASNN-----KQLQKAPAKEEEPTKKDEPRFQAFSGKSYSLK 330
>gi|356538998|ref|XP_003537987.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Glycine
max]
Length = 338
Score = 337 bits (865), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 181/334 (54%), Positives = 230/334 (68%), Gaps = 29/334 (8%)
Query: 8 AAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYC 67
A F+ YRC+P FI+K +LENG KI+MPPSAL RLAYL IEYPM+FEL N+SA VT+C
Sbjct: 31 AIFQDVYRCFPACFIEKSNLENGGKIIMPPSALRRLAYLDIEYPMVFELRNSSAEIVTHC 90
Query: 68 GVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKA 127
GV+EF ADEG+I++P WMM+NM LQEG+ V +KN + + +YVKLQPHTKDFLDISNPK+
Sbjct: 91 GVLEFTADEGIIHMPEWMMKNMKLQEGNTVILKNTQVPRATYVKLQPHTKDFLDISNPKS 150
Query: 128 VLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEP 187
+LE +LRSYSCLTTGDTIM+PYNNKKYYI++VETKPS A+S+IETDCEVDF PLD+ EP
Sbjct: 151 ILEISLRSYSCLTTGDTIMIPYNNKKYYIDIVETKPSNAISVIETDCEVDFAQPLDYIEP 210
Query: 188 EKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTGS 247
E + LP S+ S++ EV ++ + A+ PFTG
Sbjct: 211 E---------KLLP------------------SASSDKGCTEVHDDSATQTAQIVPFTGF 243
Query: 248 GRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNANQSSN 307
GR ++GK TQ +V + +++ + SK S+ +SR+ SGKLVFGSNAN
Sbjct: 244 GRRVDGKPCTQ-SVEETCSMLNLLKTEKETKNCNSKISNTASRRASGKLVFGSNANTPKI 302
Query: 308 GT-PKVLPKSSSGEPPQVEEKPKFQAFTGKKYSL 340
T PK K + E + EE+ KFQAFTGKKYSL
Sbjct: 303 QTPPKASLKIKTQESSKKEEESKFQAFTGKKYSL 336
>gi|302804412|ref|XP_002983958.1| hypothetical protein SELMODRAFT_119522 [Selaginella moellendorffii]
gi|300148310|gb|EFJ14970.1| hypothetical protein SELMODRAFT_119522 [Selaginella moellendorffii]
Length = 314
Score = 334 bits (856), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 180/338 (53%), Positives = 228/338 (67%), Gaps = 45/338 (13%)
Query: 10 FERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGV 69
FE+ YRCY SFIDKPHLENGDK++MPPSALDRLA L I+YPMLFE+ N S R ++CGV
Sbjct: 17 FEQNYRCYSASFIDKPHLENGDKVIMPPSALDRLASLRIDYPMLFEVHNPSTSRTSHCGV 76
Query: 70 MEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVL 129
+EF+ADEG+I +PYWMM+N+LLQEGD+V VK+A+L KGSYVKLQPHTKDFLDISNPKAVL
Sbjct: 77 LEFVADEGIIIMPYWMMQNLLLQEGDLVRVKSATLPKGSYVKLQPHTKDFLDISNPKAVL 136
Query: 130 ETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEK 189
ETTLR++SCLT GD IMV YNNKKYYI++VE KP+ A+SIIETDCEVDF PPLD+KEPE
Sbjct: 137 ETTLRNFSCLTVGDNIMVAYNNKKYYIDIVEAKPAPAISIIETDCEVDFAPPLDYKEPE- 195
Query: 190 PSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTGSGR 249
R +P P++P +++ ++ +E KF+ FTG GR
Sbjct: 196 --------RAVP------------PQQPPAAATADGEAEAAEEP------KFNAFTGVGR 229
Query: 250 CLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSA-----SSRQKSGKLVFGSNANQ 304
L+GK+ V P A ++ KS +++ GKLVFG
Sbjct: 230 RLDGKAPKVWAV---------PSTEEAPAVSAPKSKVVPPAPDPAQRPHGKLVFGPATAN 280
Query: 305 SSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
+++ T PK S E + ++ KFQAFTG+KYSL+G
Sbjct: 281 AADAT----PKKPSEEKEEAPKEAKFQAFTGRKYSLKG 314
>gi|302754576|ref|XP_002960712.1| hypothetical protein SELMODRAFT_74563 [Selaginella moellendorffii]
gi|300171651|gb|EFJ38251.1| hypothetical protein SELMODRAFT_74563 [Selaginella moellendorffii]
Length = 309
Score = 333 bits (855), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 177/333 (53%), Positives = 218/333 (65%), Gaps = 40/333 (12%)
Query: 10 FERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGV 69
FE+ YRCY SFIDKPHLENGDK++MPPSALDRLA L I+YPMLFE+ N + R ++CGV
Sbjct: 17 FEQNYRCYSASFIDKPHLENGDKVIMPPSALDRLASLRIDYPMLFEVHNPATSRTSHCGV 76
Query: 70 MEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVL 129
+EF+ADEG+I +PYWMM+N+LLQEGD+V VK+A+L KGSYVKLQPHTKDFLDISNPKAVL
Sbjct: 77 LEFVADEGIIIMPYWMMQNLLLQEGDLVRVKSATLPKGSYVKLQPHTKDFLDISNPKAVL 136
Query: 130 ETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEK 189
ETTLR++SCLT GD IMV YNNKKYYI++VE KP+ A+SIIETDCEVDF PPLD+KEPE+
Sbjct: 137 ETTLRNFSCLTVGDNIMVAYNNKKYYIDIVEAKPAPAISIIETDCEVDFAPPLDYKEPER 196
Query: 190 PSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTGSGR 249
+ K EP KF+ FTG GR
Sbjct: 197 AAPPQQPPAAATGDKSEP--------------------------------KFNAFTGVGR 224
Query: 250 CLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNANQSSNGT 309
L+GK+ P P + P +A + + R GKLVFG +++ T
Sbjct: 225 RLDGKA---PKAWPVPSTQEAPAVSAPKPKVVPPAPDPAQR-PHGKLVFGPATANAADAT 280
Query: 310 PKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
PK S E + ++ KFQAFTG+KYSL+G
Sbjct: 281 ----PKKPSEEKEEAPKEAKFQAFTGRKYSLKG 309
>gi|356544568|ref|XP_003540721.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Glycine
max]
Length = 365
Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 182/337 (54%), Positives = 228/337 (67%), Gaps = 39/337 (11%)
Query: 8 AAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYC 67
A F+ YRCYP F++KP+LENG KI+MPPSAL RLA+L I YPMLFEL N SA RVT+C
Sbjct: 62 AIFQDVYRCYPACFLEKPNLENGGKIIMPPSALLRLAHLDIVYPMLFELRNPSAERVTHC 121
Query: 68 GVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKA 127
GV+EF ADEG+IY+P WMM+NM LQE + V +KN + + +Y KLQPHTKDFLDIS+PK+
Sbjct: 122 GVLEFTADEGIIYMPEWMMKNMKLQERNTVILKNTHVPRATYAKLQPHTKDFLDISDPKS 181
Query: 128 VLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEP 187
+LE +LRSYSCLTTGDTIM+PYNNKKYYI++VETKPS AVSIIETDCEVDF
Sbjct: 182 ILEISLRSYSCLTTGDTIMIPYNNKKYYIDIVETKPSHAVSIIETDCEVDF--------- 232
Query: 188 EKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTGS 247
PLD+K PEK S+ S++ E K A+ PFTG
Sbjct: 233 ------------------AQPLDYKEPEKLLPSASSDKGCTEAT-----KTARIIPFTGF 269
Query: 248 GRCLNGKSSTQPTVSPSSPLIDNPQ-QNAANGINGSKSSSASSRQKSGKLVFGSNANQSS 306
GR L+G+ T P+V +S ++ + +N N SK SS +SR+ SGKLVF SNAN ++
Sbjct: 270 GRRLDGEPCT-PSVEETSSMLKQLEIENETKNCN-SKISSTASRRASGKLVFRSNANANA 327
Query: 307 NGT---PKVLPKSSSGEPPQVEEKPKFQAFTGKKYSL 340
+ PK K ++ E + EE+PKF+AF GKKYSL
Sbjct: 328 SKIQTPPKGSLKGTTQESSK-EEEPKFKAFAGKKYSL 363
>gi|168052703|ref|XP_001778779.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669785|gb|EDQ56365.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 322
Score = 327 bits (838), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 179/340 (52%), Positives = 225/340 (66%), Gaps = 31/340 (9%)
Query: 5 HHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRV 64
+ A FE+ YRCY SFIDKPHLENGDK+VMPPSALDRLA L I+YPMLFE+ N S R
Sbjct: 10 YSSAPFEQNYRCYSASFIDKPHLENGDKVVMPPSALDRLASLRIDYPMLFEVHNPSTLRT 69
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
++CGV+EF+A+EG+IY+PYWMM+NMLLQEGDIV VK+A+L KG++VKLQPHTKDFLDISN
Sbjct: 70 SHCGVLEFVAEEGMIYMPYWMMQNMLLQEGDIVRVKSATLPKGTFVKLQPHTKDFLDISN 129
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDF 184
PKAVLETTLR++SCLT GD IMV YNNKKYYI+++E+KP+ A+SIIETDCEVDF PPLD+
Sbjct: 130 PKAVLETTLRNFSCLTIGDNIMVAYNNKKYYIDIIESKPANAISIIETDCEVDFAPPLDY 189
Query: 185 KEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPF 244
KEPE R P PP+ P+ SS + P + KFS F
Sbjct: 190 KEPE---------RVTP-----PPVSV-----PAQSS------QDATPPPEPEEPKFSAF 224
Query: 245 TGSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNANQ 304
TG+GR L+GK + + + + + + Q+ GKLVFG ++
Sbjct: 225 TGTGRRLDGKPG-KLSTGSIPSTSSTTPTATTSSVQKPTGTPPAGAQRPGKLVFGGGSSN 283
Query: 305 SSNGTPKVLPKS---SSGEPPQVEEKPKFQAFTGKKYSLR 341
+ LP + E + E KFQAF+G+KYSLR
Sbjct: 284 APAAAK--LPSTKKEEVKEEKKEPEASKFQAFSGRKYSLR 321
>gi|356508175|ref|XP_003522835.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Glycine
max]
Length = 300
Score = 323 bits (828), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 178/343 (51%), Positives = 220/343 (64%), Gaps = 48/343 (13%)
Query: 1 AYENHHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTS 60
Y ++FE+ +RCY SFI+KP +ENGDKI+MPPS LDRLA+L ++YPM+FEL N +
Sbjct: 5 GYGYQGTSSFEQTFRCYSASFIEKPEIENGDKIIMPPSVLDRLAFLRMDYPMMFELRNGA 64
Query: 61 AGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFL 120
+ RV++CGV+EFIADEG IY+PYWMM+N+LLQEGDIV VK SL KG+YVKLQPHTKDF
Sbjct: 65 SERVSHCGVLEFIADEGTIYMPYWMMQNLLLQEGDIVRVKFVSLPKGTYVKLQPHTKDFF 124
Query: 121 DISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIP 180
DISNPKA+LETTLR +SCLTTGDTIM+ YNNKKYY++V+ETKP+ A+SIIETDCEVDF P
Sbjct: 125 DISNPKAILETTLRKFSCLTTGDTIMMTYNNKKYYLDVIETKPANAISIIETDCEVDFAP 184
Query: 181 PLDFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAK 240
LD+K +S +L E K
Sbjct: 185 SLDYK--VTTASKTLDKAIFLE------------------------------------GK 206
Query: 241 FSPFTGSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGS 300
F+PF G+GR L+G S P V S P D P N+ + S + A R GKLVF S
Sbjct: 207 FNPFFGTGRRLDGISI--PPVYSSRP-SDVPNVNSLSSTTSSSPNFA--RPSQGKLVFAS 261
Query: 301 NANQSSN-GTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
N ++ G K S EPP +++PKFQ F G KYSLRG
Sbjct: 262 NFYRTKEIGKEK---NESKQEPPH-QKQPKFQPFIGNKYSLRG 300
>gi|224080470|ref|XP_002306140.1| predicted protein [Populus trichocarpa]
gi|222849104|gb|EEE86651.1| predicted protein [Populus trichocarpa]
Length = 258
Score = 318 bits (814), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 170/285 (59%), Positives = 204/285 (71%), Gaps = 37/285 (12%)
Query: 35 MPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEG 94
MPPSALDRLA LHI+YPMLFEL N +A RV++CGV+EFIA+EG+IY+PYWMMEN+LLQEG
Sbjct: 1 MPPSALDRLASLHIDYPMLFELRNAAAERVSHCGVLEFIAEEGMIYMPYWMMENLLLQEG 60
Query: 95 DIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKY 154
DIV VKN +L KG YVKLQPHTKDFLDISNPKA+LETTLR+YSCLTTGD+IMV YNNKKY
Sbjct: 61 DIVRVKNVTLPKGKYVKLQPHTKDFLDISNPKAILETTLRNYSCLTTGDSIMVAYNNKKY 120
Query: 155 YINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGP 214
YI++VETKPS A+SIIETDCEVDF PPLD+KEPEKP +S +P P
Sbjct: 121 YIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKPVAS------VP------------P 162
Query: 215 EKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTGSGRCLNGK--SSTQPTVSPSS----PLI 268
K +S + +E P + KF+PFTG+GR L+GK S P VS S P +
Sbjct: 163 SKATS---------QAEEVPAETEPKFNPFTGTGRRLDGKPMSYQPPPVSSGSKDKQPAV 213
Query: 269 DNPQQNAANGINGSKSSSASSRQKSGKLVFGSNANQSSNGTPKVL 313
N + + G S ++RQ GKLVFGSNA++S T +VL
Sbjct: 214 ANDSRQPSLG----SISKNTARQSQGKLVFGSNASRSPKETQQVL 254
>gi|359478623|ref|XP_002280743.2| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Vitis
vinifera]
Length = 339
Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 168/333 (50%), Positives = 223/333 (66%), Gaps = 49/333 (14%)
Query: 10 FERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGV 69
F++ Y C P S ++KP LE GDKI+MP SALD L L I +PMLF+L N ++GRVT+CGV
Sbjct: 54 FKQIYHCLPASSLNKPQLEMGDKIIMPASALDLLTNLEISFPMLFKLKNPASGRVTHCGV 113
Query: 70 MEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVL 129
+EF A EG ++LP WMMEN+LL+EGDIV+VKN SL G+Y++LQPHTK+FLDI+NP+A+L
Sbjct: 114 LEFTAKEGTMHLPSWMMENLLLEEGDIVKVKNVSLPAGTYMQLQPHTKNFLDITNPRAML 173
Query: 130 ETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEK 189
ET LRS+SCLTTGDTI++ Y+NKK+YI++V+TKPS AV II+TDCEVDF
Sbjct: 174 ETKLRSFSCLTTGDTIVIDYSNKKFYIDIVDTKPSAAVCIIDTDCEVDF----------- 222
Query: 190 PSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKE-EPPKKIAKFSPFTGSG 248
PPLD++ ++P S+LS++T E +E + K+ KF PFTGS
Sbjct: 223 ----------------APPLDYEEADEPKPSNLSSKT--ESRESKLATKLIKFKPFTGSA 264
Query: 249 RCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNANQSSNG 308
R L+GK I Q +G NG SSS+++ Q+S K+VFGS ++S
Sbjct: 265 RRLDGKP------------ISESQPEDTDGTNGPTSSSSTTFQRSRKVVFGSK--ETSEA 310
Query: 309 TPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
P +S + PQ EKPKFQAFTGKKY+L+
Sbjct: 311 AP-----VASQKHPQEVEKPKFQAFTGKKYTLQ 338
>gi|222641841|gb|EEE69973.1| hypothetical protein OsJ_29866 [Oryza sativa Japonica Group]
Length = 330
Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 178/347 (51%), Positives = 228/347 (65%), Gaps = 49/347 (14%)
Query: 10 FERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELS---NTSAGRVTY 66
FE+ YRCY + +KP LE GDK++MP SAL RLA LHI+YPMLFELS + +A RVT+
Sbjct: 17 FEQTYRCYSAAAFNKPQLEGGDKVIMPASALHRLASLHIDYPMLFELSHHGDAAAHRVTH 76
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
CGV+EF+ADEG + +P WMM M L +G +V V++ASL KGSY KLQPHT DFLD +NPK
Sbjct: 77 CGVLEFVADEGTVIMPRWMMRGMRLDDGGLVVVRSASLPKGSYAKLQPHTGDFLDTANPK 136
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
AVLE TLRS++CLTTGDTIMV YNNK++ I++VETKP++AV IIETDCEVDF PPLD+KE
Sbjct: 137 AVLEKTLRSFTCLTTGDTIMVAYNNKEFLIDIVETKPASAVCIIETDCEVDFAPPLDYKE 196
Query: 187 PEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTG 246
PEK V+++P + PSS + S ++K+EP +F FTG
Sbjct: 197 PEK-------------VQQKPSV-------PSSKAASE-DQDQIKDEP-----EFRAFTG 230
Query: 247 SGRCLNGKSSTQPTVSPSSPLIDNP------------QQNAANGINGSKSSSASSRQKSG 294
SG L+GK+S +P + S Q+ AA+G+ S S+RQK G
Sbjct: 231 SGNRLDGKAS-KPLAAGISSNPAAASSAISDSNKKVNQETAASGV------SNSTRQKKG 283
Query: 295 KLVFGSNANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
KLVFGSN + SS+ P+ P E + EE PKFQAF+G YSL+
Sbjct: 284 KLVFGSNKSSSSSKEPEKAPPVKVDELAKKEE-PKFQAFSGTSYSLK 329
>gi|218202383|gb|EEC84810.1| hypothetical protein OsI_31880 [Oryza sativa Indica Group]
Length = 330
Score = 313 bits (803), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 177/347 (51%), Positives = 228/347 (65%), Gaps = 49/347 (14%)
Query: 10 FERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELS---NTSAGRVTY 66
FE+ YRCY + +KP LE GDK++MP SAL RLA LHI+YPMLFELS + +A RVT+
Sbjct: 17 FEQTYRCYSAAAFNKPQLEGGDKVIMPASALHRLASLHIDYPMLFELSHHGDAAAHRVTH 76
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
CGV+EF+ADEG + +P WMM M L +G +V V++ASL KGSY KLQPHT DFLD +NPK
Sbjct: 77 CGVLEFVADEGTVIMPRWMMRGMRLDDGGLVVVRSASLPKGSYAKLQPHTGDFLDTANPK 136
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
AVLE TLRS++CLTTGDTIMV YNNK++ I+++ETKP++AV IIETDCEVDF PPLD+KE
Sbjct: 137 AVLEKTLRSFTCLTTGDTIMVAYNNKEFLIDIIETKPASAVCIIETDCEVDFAPPLDYKE 196
Query: 187 PEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTG 246
PEK V+++P + PSS + S ++K+EP +F FTG
Sbjct: 197 PEK-------------VQQKPSV-------PSSKAASE-DQDQIKDEP-----EFRAFTG 230
Query: 247 SGRCLNGKSSTQPTVSPSSPLIDNP------------QQNAANGINGSKSSSASSRQKSG 294
SG L+GK+S +P + S Q+ AA+G+ S S+RQK G
Sbjct: 231 SGNRLDGKAS-KPLAAGISSNPAAASSAISDSNKKVNQETAASGV------SNSTRQKKG 283
Query: 295 KLVFGSNANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
KLVFGSN + SS+ P+ P E + EE PKFQAF+G YSL+
Sbjct: 284 KLVFGSNKSSSSSKEPEKAPPVKVDELAKKEE-PKFQAFSGTSYSLK 329
>gi|388518993|gb|AFK47558.1| unknown [Lotus japonicus]
Length = 231
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 144/201 (71%), Positives = 171/201 (85%), Gaps = 8/201 (3%)
Query: 5 HHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRV 64
+H +FE+ YRCYP SFI+KP LE+GDKI+MPPSALDRLA LHI+YPMLFEL N A RV
Sbjct: 8 YHGTSFEQTYRCYPASFIEKPQLESGDKIIMPPSALDRLASLHIDYPMLFELRNDDAERV 67
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
++CGV+EFIA+EG+IY+PYWMMENMLLQEGDIV VKN +L KG YVKLQPHTKDFLDISN
Sbjct: 68 SHCGVLEFIAEEGMIYMPYWMMENMLLQEGDIVRVKNVTLPKGKYVKLQPHTKDFLDISN 127
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDF 184
PKA+LETTLR++S LTTGD+IMV YNNKKYYI+++ETKP+ A+SIIETDCEVDF PPLD+
Sbjct: 128 PKAILETTLRNFSRLTTGDSIMVAYNNKKYYIDIIETKPANAISIIETDCEVDFAPPLDY 187
Query: 185 KEPEKPSSSSLSNRTLPEVKE 205
K SL +R L ++E
Sbjct: 188 K--------SLRSRLLHILRE 200
>gi|384250372|gb|EIE23851.1| UFD1-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 306
Score = 310 bits (793), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 165/340 (48%), Positives = 215/340 (63%), Gaps = 44/340 (12%)
Query: 8 AAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYC 67
+F+ YRCYP+SF+DKP E G+KI +P SALDRLA LHIEYPMLF++ + GR T+C
Sbjct: 4 GSFQAHYRCYPVSFMDKPEAETGNKIFLPSSALDRLASLHIEYPMLFKVESRGNGRSTHC 63
Query: 68 GVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKA 127
GV+EF ADEGL+Y+PYWMM+N+L++EG +V V +A+L KGSYVKLQPHT DFLDISNPKA
Sbjct: 64 GVLEFSADEGLVYMPYWMMQNLLVEEGSVVTVSSATLPKGSYVKLQPHTSDFLDISNPKA 123
Query: 128 VLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEP 187
VLE TLR++SCLT GD I + YNNKKYYI+++E KP A+S+IETDCEVDF PPLD+ EP
Sbjct: 124 VLEMTLRNFSCLTKGDCICLHYNNKKYYIDIIEAKPEDAISVIETDCEVDFAPPLDYVEP 183
Query: 188 EKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTGS 247
++ + P + ++ PEV EP +F F G
Sbjct: 184 KRVERA-----------------------PEPARTTDDAGPEVAPEP----ERFLAFVGP 216
Query: 248 GRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNANQ--- 304
GR L+G+ P V P + + AA G++ QKSGK+VFG+ N+
Sbjct: 217 GRRLDGR----PAV--GGPPVAGSSEGAAKPAEGNRPG-----QKSGKVVFGATGNRLLD 265
Query: 305 --SSNGTPKV-LPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
+ PK P+S G + +E KF+AFTGK SLR
Sbjct: 266 KKLAAEKPKAPKPESVDGVQEKKDEDSKFKAFTGKPRSLR 305
>gi|374256025|gb|AEZ00874.1| putative ubiquitin fusion degradation protein, partial [Elaeis
guineensis]
Length = 252
Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 156/279 (55%), Positives = 195/279 (69%), Gaps = 31/279 (11%)
Query: 68 GVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKA 127
GV+EFIA+EG+IY+PYWMM+N+LLQEGD V VKNA+L KG+YVKLQPHTKDFLDISNPKA
Sbjct: 1 GVLEFIAEEGMIYMPYWMMQNLLLQEGDTVRVKNATLPKGTYVKLQPHTKDFLDISNPKA 60
Query: 128 VLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEP 187
+LETTLRS+SCLTTGD+IMV YNNKKYYI++VETKP++A+SIIETDCEVDF PPLD+KEP
Sbjct: 61 ILETTLRSFSCLTTGDSIMVAYNNKKYYIDIVETKPASAISIIETDCEVDFAPPLDYKEP 120
Query: 188 EKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTGS 247
E+P S+ PP ++ P +V+E KFSPFTG
Sbjct: 121 EQPLQPSI-----------PP---------------SKAPVQVQEAEADAGPKFSPFTGI 154
Query: 248 GRCLNGKSS--TQPTVSPS--SPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNAN 303
GR L+GK S +PT+S S + ++ PQ + + S +S+ Q GKLVFGSNAN
Sbjct: 155 GRRLDGKPSKHQEPTISSSVVNHQMEAPQNAKQHSTASTSQSGSSAHQSVGKLVFGSNAN 214
Query: 304 QSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
+ KV K + E P+ EE PKF+AF+GK YSL+G
Sbjct: 215 HAPKEEQKVATKETKAEAPEKEE-PKFKAFSGKSYSLKG 252
>gi|255637988|gb|ACU19310.1| unknown [Glycine max]
Length = 196
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 130/185 (70%), Positives = 159/185 (85%)
Query: 1 AYENHHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTS 60
Y ++FE+ +RCY SFI+KP +ENGDKI+MPPS LDRLA+L ++YPM+FEL N +
Sbjct: 5 GYGYQGTSSFEQTFRCYSASFIEKPEIENGDKIIMPPSVLDRLAFLRMDYPMMFELRNGA 64
Query: 61 AGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFL 120
+ RV++CGV+EFIADEG IY+PYWMM+N+LLQEGDIV VK SL KG+YVKLQPHTKDF
Sbjct: 65 SERVSHCGVLEFIADEGTIYMPYWMMQNLLLQEGDIVRVKFVSLPKGTYVKLQPHTKDFF 124
Query: 121 DISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIP 180
DISNPKA+LETTLR +SCLTTGDTIM+ YNNKKYY++V+ETKP+ A+SIIETDCEVDF P
Sbjct: 125 DISNPKAILETTLRKFSCLTTGDTIMMTYNNKKYYLDVIETKPANAISIIETDCEVDFAP 184
Query: 181 PLDFK 185
LD+K
Sbjct: 185 SLDYK 189
>gi|147799654|emb|CAN70718.1| hypothetical protein VITISV_024234 [Vitis vinifera]
Length = 497
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 183/367 (49%), Positives = 220/367 (59%), Gaps = 63/367 (17%)
Query: 4 NHHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGR 63
+H +FE+KYRCYP SFIDKP +E+G KI+MPPSALDRLA LHI+YPMLFELSN +A R
Sbjct: 73 GYHGMSFEQKYRCYPASFIDKPQIESGGKIIMPPSALDRLASLHIDYPMLFELSNPAAQR 132
Query: 64 VTYCGVMEFIADEGLIYLPYW------------------------MMENMLLQEGDIVEV 99
V++CGV+EFIA+EG+IY+PYW MMENMLLQEGD V+
Sbjct: 133 VSHCGVLEFIAEEGMIYMPYWVSFTTADVSRALIPVVILLIVSCQMMENMLLQEGDTVQP 192
Query: 100 KNASLAKGSYVKLQPHTKDFLD--ISNPKAV-LETTLRSYSCLTTGDTIMVPYNNKKYYI 156
KG V L LD P+ V LETTLR++SCLTTGD+IMV YNNKKYYI
Sbjct: 193 H-----KGMDV-LNIEAAAVLDGFFPTPRWVSLETTLRNFSCLTTGDSIMVAYNNKKYYI 246
Query: 157 NVVETKPSTAVSIIETDCEVDFIPPLDFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEK 216
++VETKPS A+SIIETDCEVDF PPLD KEPEKP + + EV+E P
Sbjct: 247 DIVETKPSNAISIIETDCEVDFAPPLDXKEPEKPVAPVPLGKAAAEVQEAP--------- 297
Query: 217 PSSSSLSNRTPPEVKEEPPKKIAKFSPFTGSGRCLNGKSSTQ--PTVSPSSPLIDNPQQN 274
V+ EP KF+PF G GR L+GK P VS S P
Sbjct: 298 -------------VEPEP-----KFNPFCGVGRRLDGKPQKYEPPPVSSSGSKDKRPVNR 339
Query: 275 AANGINGSKSSSASSRQKSGKLVFGSNANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFT 334
+ + SS +SSRQ GKLVFGSN N+S T K K++ E P+ EE PKFQ F+
Sbjct: 340 GSGQPSAGSSSQSSSRQSQGKLVFGSNVNRSPKETQKEAAKATKQEEPKKEE-PKFQPFS 398
Query: 335 GKKYSLR 341
GK + R
Sbjct: 399 GKNFPDR 405
>gi|307105024|gb|EFN53275.1| hypothetical protein CHLNCDRAFT_136896 [Chlorella variabilis]
Length = 347
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 120/180 (66%), Positives = 157/180 (87%)
Query: 10 FERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGV 69
FE YRCYP+SF+DKP E GDKI +PPSALDRLA LHI+YPMLF++ N GR T+CGV
Sbjct: 13 FEASYRCYPVSFLDKPEAERGDKIFLPPSALDRLAQLHIDYPMLFQVENRRDGRNTHCGV 72
Query: 70 MEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVL 129
+EFIADEG++Y+PYWMM+N+LLQEGD+V++++A+L KG++VKLQPH+ DFLDI+NP+AVL
Sbjct: 73 LEFIADEGMVYMPYWMMQNLLLQEGDVVQLRSATLPKGTFVKLQPHSADFLDITNPRAVL 132
Query: 130 ETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEK 189
ETTLR++SCLT GDTI + YNN++Y+I+++E KPS A+S+IETDC VDF PPLD+ EP +
Sbjct: 133 ETTLRNFSCLTVGDTIPINYNNRRYFIDIIEAKPSDAISVIETDCNVDFAPPLDYVEPAR 192
>gi|308807517|ref|XP_003081069.1| Ubiquitin fusion-degradation protein (IC) [Ostreococcus tauri]
gi|116059531|emb|CAL55238.1| Ubiquitin fusion-degradation protein (IC) [Ostreococcus tauri]
Length = 354
Score = 283 bits (725), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 146/308 (47%), Positives = 196/308 (63%), Gaps = 27/308 (8%)
Query: 9 AFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHI-EYPMLFELSNTSAGRVTYC 67
F YR YP+SFID+P +E GDK +MPPSAL+RL + I E+PM FE+ N GR T+C
Sbjct: 10 GFTASYRVYPVSFIDRPQVELGDKAIMPPSALERLTRMQIDEFPMTFEVENAKRGRKTHC 69
Query: 68 GVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKA 127
GV+EF+ADEG++YLPYWMM+N+LL+EGD+V+ AS KG+YVKLQP TKDFLDISNPKA
Sbjct: 70 GVLEFVADEGVVYLPYWMMQNLLLEEGDVVKFTYASPPKGTYVKLQPQTKDFLDISNPKA 129
Query: 128 VLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEP 187
VLE TLR+Y+CLT GDT ++ YNNKKYY++VVE KP A+ +++TDCEVDF PPLD+ +P
Sbjct: 130 VLEMTLRNYTCLTVGDTFVIHYNNKKYYMDVVEAKPGDAIGVVDTDCEVDFAPPLDYVDP 189
Query: 188 EKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTGS 247
P ++ + + + G + +S+S + E EP K F F G
Sbjct: 190 YGPDNTKFEDTNSGAINAPKKEEVAGDDAGASTSGA-----ETSVEP--KTKTFLAFAGG 242
Query: 248 GRCLNGKSSTQ--------PTVSPSSPLIDNPQQNAANGINGSKSS---------SASSR 290
GR L+GKS ++ PT S + QQ G+ G ++S R
Sbjct: 243 GRRLDGKSISEIAPVEVEIPTTSLR--VTKEWQQLRQGGVLGGETSKEPEQPNPDGDIDR 300
Query: 291 QKSGKLVF 298
++SGK+VF
Sbjct: 301 KRSGKVVF 308
>gi|145350179|ref|XP_001419494.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579726|gb|ABO97787.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 355
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 149/350 (42%), Positives = 211/350 (60%), Gaps = 20/350 (5%)
Query: 8 AAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIE-YPMLFELSNTSAGRVTY 66
A F YR YP+SFID+P LE GDK+++PPSAL+RL + I+ YPMLFE++N G+ T+
Sbjct: 10 ARFNASYRAYPVSFIDRPQLELGDKVILPPSALERLTRMQIDDYPMLFEVTNAKEGKSTH 69
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
CGV+EF+ADEG++YLPYWMM+N+LL EGDIV+ ++L KG+YVKLQP T+DFLDISNPK
Sbjct: 70 CGVLEFVADEGVVYLPYWMMQNLLLGEGDIVKFSYSTLPKGTYVKLQPQTQDFLDISNPK 129
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
AVLETTLR Y+CLT GDT ++ YNNK+Y+I+V+E KP A+ +++TDCEVDF PPLD+ +
Sbjct: 130 AVLETTLRQYTCLTVGDTFVIHYNNKQYHIDVIEAKPGDAIGVVDTDCEVDFAPPLDYVD 189
Query: 187 PEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTG 246
P P ++ + + D + + +S T E P + F F G
Sbjct: 190 PYGPDTTKFEDTNSGAINAPKTAD----KADAGASGDAATNGETLAAPQPVVNTFLAFAG 245
Query: 247 SGRCLNGKSSTQ----PTVSPSSPL--IDNPQQNAANGINGSKSS---------SASSRQ 291
G L+GK+ ++ P+S L QQ G+ G ++S + R+
Sbjct: 246 GGHRLDGKAISEIAPKEVEIPTSSLNVTKEWQQLRQGGVLGGETSKEPEKPAPDADIDRK 305
Query: 292 KSGKLVFGSNANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
+SGK+VFG + + + + + + FQAF G LR
Sbjct: 306 RSGKVVFGGARAAAIARKKEKAAVAKKDDSSKDKPTSTFQAFQGSGNKLR 355
>gi|303274673|ref|XP_003056652.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461004|gb|EEH58297.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 363
Score = 280 bits (716), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 146/308 (47%), Positives = 197/308 (63%), Gaps = 28/308 (9%)
Query: 13 KYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHI-EYPMLFELSNTSAGRVTYCGVME 71
+YR YP+SFID+P LENGDK+++PPSALDRL I E+PMLFE++N + T+CGV+E
Sbjct: 14 QYRVYPVSFIDRPQLENGDKVILPPSALDRLTRAGIDEFPMLFEITNVKQKKKTHCGVLE 73
Query: 72 FIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLET 131
F+ADEG++YLPYWMM+N+LL EGD+V+ ++A L KGSYVKL+PHTKDF+DISNPKAVLET
Sbjct: 74 FVADEGVVYLPYWMMQNLLLAEGDVVKFQSAKLPKGSYVKLRPHTKDFMDISNPKAVLET 133
Query: 132 TLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEP--EK 189
TLRSY+CLT+GD+I++ YNNK+Y+I++V+ KP+ A+SI++TDCEVDF PPLD+ EP EK
Sbjct: 134 TLRSYTCLTSGDSILISYNNKRYFIDIVDAKPAPAISIVDTDCEVDFAPPLDYVEPAFEK 193
Query: 190 PSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTGSGR 249
P+ + + + + + E KF F G GR
Sbjct: 194 PAEARAAAAAAAAAAAGG------GGAEGADGGAEKGGEIAPAEAADDAPKFLAFAGGGR 247
Query: 250 CLNGKSSTQ---------PTVSPS-----SPLIDNPQQNAANGINGSKSSSASS-----R 290
L+GKS+ PT S I P+ G+K+ S R
Sbjct: 248 RLDGKSARDDLKPVEVELPTTSLKLSKEFEQFIRGPKPVNEGKEGGAKAKSEGGASGLPR 307
Query: 291 QKSGKLVF 298
+K+GKLVF
Sbjct: 308 RKAGKLVF 315
>gi|412990791|emb|CCO18163.1| predicted protein [Bathycoccus prasinos]
Length = 400
Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 153/390 (39%), Positives = 210/390 (53%), Gaps = 55/390 (14%)
Query: 4 NHHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYL-HIEYPMLFELSNTSAG 62
N + FE +YR YP+SFID+ L+ GDKI++PPSALDRL+ L +++PMLF + N
Sbjct: 14 NRASSLFEAQYRAYPVSFIDRSELDKGDKIILPPSALDRLSQLGDLDFPMLFNVENVKEK 73
Query: 63 RVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDI 122
T+CGV+EFIADEG+ YLPYWMM+N+ L EGD++ VKNA L KG++VKLQP T DFL+I
Sbjct: 74 TKTHCGVLEFIADEGVCYLPYWMMQNLRLVEGDVLRVKNARLPKGTFVKLQPQTSDFLNI 133
Query: 123 SNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPL 182
SNPKAVLET LR+Y+CLT DT M+ YNNK+Y+I+V+E KP+ V ++ETDCEVDF PL
Sbjct: 134 SNPKAVLETCLRNYTCLTVNDTFMIEYNNKRYFIDVIEAKPADGVCVVETDCEVDFAAPL 193
Query: 183 DFKEPEKPSSSSL----------------------SNRTLPEVKEEPPLDFKGPEKPSSS 220
D+ EP+ S + +V E +D G + +
Sbjct: 194 DYVEPDYNSKGGGLGGGGGGNATTTTTTTKKRGDGEEESFMDVDENGVVDLTGGSTSTRA 253
Query: 221 SLSNRTPPEVKEEPPKKIAKFSPFTGSGRCLNGKSSTQPTVSPSSP-------------- 266
+ + ++E F F GSG L+GK+ P V S P
Sbjct: 254 KDEKKEEKKDEKEEENNKNTFLAFAGSGNRLDGKA---PKVGESQPVKVELPTTSLRVTK 310
Query: 267 ----LIDNPQQNAANGINGSKSSSAS-----SRQKSGKLVFGSNANQSSNG------TPK 311
L + A G N K S S R+ +GK++FG A ++ + K
Sbjct: 311 EWQKLREGGVLGDAEGANDEKKKSLSEAERAERKAAGKVMFGGGARVAAMARKKQKESEK 370
Query: 312 VLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
++ G+ E+K F AF G LR
Sbjct: 371 KSADAADGKNGTTEKKDGFSAFKGGGNKLR 400
>gi|302828168|ref|XP_002945651.1| hypothetical protein VOLCADRAFT_102621 [Volvox carteri f.
nagariensis]
gi|300268466|gb|EFJ52646.1| hypothetical protein VOLCADRAFT_102621 [Volvox carteri f.
nagariensis]
Length = 361
Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 157/364 (43%), Positives = 207/364 (56%), Gaps = 49/364 (13%)
Query: 10 FERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGV 69
FE YR P++FIDK E+GDKI+MPPSAL+RLA LHIEYPMLF++ + R T+CGV
Sbjct: 16 FEAMYRAMPVAFIDKQSAEHGDKIIMPPSALERLASLHIEYPMLFKVEGLQSKRHTHCGV 75
Query: 70 MEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVL 129
+EFIA+EG++Y+P+WMM+N+LLQ GD + V++ASL KG+YVKLQP T DFLDI+NPKAVL
Sbjct: 76 LEFIAEEGVVYMPHWMMQNLLLQVGDTIRVRSASLPKGTYVKLQPVTSDFLDITNPKAVL 135
Query: 130 ETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEK 189
E TLRSYSCLT GD +V YNNK Y I V + KP A+S+IETDC+VDF P D+KEPE+
Sbjct: 136 ERTLRSYSCLTVGDCFVVNYNNKNYEIEVKDAKPGPAISVIETDCQVDFEAPKDYKEPER 195
Query: 190 PSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTGSGR 249
V + P ++ + T P + KF F G+GR
Sbjct: 196 -------------VPPKAPEPAPSAAPVAADGKAGGTATGPAPAPEPEEPKFLAFAGTGR 242
Query: 250 CLNGKSSTQPTVSPSSPL---IDNPQQNAANGINGSKSSSASSR---------------- 290
L+GK++ P++P+ + P + K+ S S
Sbjct: 243 RLDGKAA-----GPTNPVPVPLRMPSNTTLSAGTSPKTGSGPSGSGAGPSGSAAPSGSGG 297
Query: 291 -QKSGKLV-FGSNAN---------QSSNGTPKVLPKSSSG-EPPQVEEKPKFQAFTGKKY 338
QK+G V FG N Q GT K P E + + F+AF+GK Y
Sbjct: 298 VQKAGTFVNFGPTGNRLEAKLAAKQGGGGTAKPPPPPPQPTEEKKDDSSSNFKAFSGKGY 357
Query: 339 SLRG 342
SL+G
Sbjct: 358 SLKG 361
>gi|159481951|ref|XP_001699038.1| hypothetical protein CHLREDRAFT_106366 [Chlamydomonas reinhardtii]
gi|158273301|gb|EDO99092.1| predicted protein [Chlamydomonas reinhardtii]
Length = 236
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 115/181 (63%), Positives = 143/181 (79%)
Query: 9 AFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCG 68
+FE YR P++FIDK E+GDKI+MPPSAL+RLA LHIEYPMLF L + R T+CG
Sbjct: 11 SFEAVYRAMPVAFIDKQSAEHGDKIIMPPSALERLASLHIEYPMLFRLEGVHSKRETHCG 70
Query: 69 VMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAV 128
V+EFIA+EG++Y+P+WMM+N+LLQ GD + V++ SL KG+YVKLQP T DFLDI+NPKAV
Sbjct: 71 VLEFIAEEGVVYMPHWMMQNLLLQVGDTIRVRSVSLPKGTYVKLQPVTSDFLDITNPKAV 130
Query: 129 LETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPE 188
LE TLR YSCLT GD +V YNNK Y I V + KP A+S+IETDC+VDF P D+KEPE
Sbjct: 131 LERTLRGYSCLTVGDCFVVHYNNKNYEIEVRDAKPGRAISVIETDCQVDFEAPKDYKEPE 190
Query: 189 K 189
+
Sbjct: 191 R 191
>gi|301105176|ref|XP_002901672.1| ubiquitin fusion degradation protein, putative [Phytophthora
infestans T30-4]
gi|262100676|gb|EEY58728.1| ubiquitin fusion degradation protein, putative [Phytophthora
infestans T30-4]
Length = 840
Score = 251 bits (642), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 125/261 (47%), Positives = 172/261 (65%), Gaps = 13/261 (4%)
Query: 10 FERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGV 69
F+ YR YP+SF DK HLE+GDKI++PPSAL+ LA LHIEYPMLF+++N R ++CGV
Sbjct: 490 FDEHYRVYPVSFCDKAHLEDGDKILLPPSALETLARLHIEYPMLFKVTNEGVERSSHCGV 549
Query: 70 MEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVL 129
+EF A EG Y+PYWMM+N+ ++EG I+ ++N SL K ++VKL+P ++DFLDISNP+AVL
Sbjct: 550 LEFSAPEGSCYMPYWMMQNLFVKEGGILNIQNVSLPKATFVKLRPQSQDFLDISNPRAVL 609
Query: 130 ETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEK 189
E +LR +SC+T GDTI + YNNK Y ++V E KP+ A IIETDCEVDF PP D+ P
Sbjct: 610 EGSLRKFSCMTVGDTICLKYNNKNYMLDVREVKPAPAACIIETDCEVDFEPPADYVPPVP 669
Query: 190 PSSSS--------LSNRTLPEVKEE--PPLDFKGPEKPSSSSL---SNRTPPEVKEEPPK 236
PS++S + +P +K E P G S L ++ +
Sbjct: 670 PSAASIPPAAPSDIPYGGVPTMKAEDVKPARLGGAGFGSGLRLKKSGEKSSTDAAALRAA 729
Query: 237 KIAKFSPFTGSGRCLNGKSST 257
++ K+ F G+G L+GKSST
Sbjct: 730 RLRKYEAFHGTGHSLSGKSST 750
>gi|325183700|emb|CCA18159.1| ubiquitin fusion degradation protein putative [Albugo laibachii
Nc14]
Length = 317
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 121/267 (45%), Positives = 171/267 (64%), Gaps = 14/267 (5%)
Query: 10 FERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGV 69
F+ +R Y +SF DK HLE+GDKI++PPSAL+ LA LHIEYPMLF+++N R ++CGV
Sbjct: 25 FDEHFRVYSMSFCDKGHLEDGDKILLPPSALEVLARLHIEYPMLFKVTNEGVNRYSHCGV 84
Query: 70 MEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVL 129
+EF A EG Y+PYWMM+N+ + EGDI+ V+N SL K ++VK++P +K+FLDISNP+AVL
Sbjct: 85 LEFSATEGSCYMPYWMMQNLFINEGDIINVQNISLPKATFVKIRPQSKEFLDISNPRAVL 144
Query: 130 ETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDF----- 184
E +LR +SC+T GDTI + YNNK + ++V E KPS+A IIETDCEVDF P D+
Sbjct: 145 EASLRKFSCMTVGDTICLKYNNKNFLLDVREVKPSSAACIIETDCEVDFELPADYIHETS 204
Query: 185 --KEPEKPSSSSLSNRTLPEVK--EEPPLDFKGPEKPSSSSL-----SNRTPPEVKEEPP 235
E PS SSL P VK E P + S + L ++ +
Sbjct: 205 QDSEANVPSDSSLPYGGFPTVKADENTPNTLQKTRAFSGNGLRLKKNGSQQSTDASALRA 264
Query: 236 KKIAKFSPFTGSGRCLNGKSSTQPTVS 262
++ KF F G+G+ ++ + + T++
Sbjct: 265 ARLQKFESFHGTGKSISNTNVKEDTMN 291
>gi|348689580|gb|EGZ29394.1| hypothetical protein PHYSODRAFT_358674 [Phytophthora sojae]
Length = 935
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 123/264 (46%), Positives = 172/264 (65%), Gaps = 19/264 (7%)
Query: 10 FERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGV 69
F+ YR YP+SF DK HLE+GDKI++PPSAL+ LA LHIEYPMLF+++N R ++CGV
Sbjct: 591 FDEHYRVYPVSFCDKAHLEDGDKILLPPSALETLARLHIEYPMLFKVTNEGVERSSHCGV 650
Query: 70 MEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVL 129
+EF A EG Y+PYWMM+N+ ++EG I+ ++N SL K ++VKL+P ++DFLDISNP+AVL
Sbjct: 651 LEFSAPEGSCYMPYWMMQNLFVKEGGILNIQNVSLPKATFVKLRPQSQDFLDISNPRAVL 710
Query: 130 ETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEK 189
E +LR +SC+T GDTI + YNNK Y ++V E KP+ A IIETDCEVDF PP D+ P
Sbjct: 711 EGSLRKFSCMTIGDTICLKYNNKNYMLDVREVKPTPAACIIETDCEVDFEPPADYVPPVP 770
Query: 190 PSSSSLSNRT---------LPEVKEEP-------PLDFKGPEKPSSSSLSNRTPPEVKEE 233
PS+++ + +P +K E F G S S+ ++
Sbjct: 771 PSAAAAAPPAAPSEIPYGGVPTMKTEDVKPTRLGGAGFGGLRLKKSGEKSSTDADALR-- 828
Query: 234 PPKKIAKFSPFTGSGRCLNGKSST 257
++ K+ F G+G L+GK+ST
Sbjct: 829 -SARLRKYEAFHGTGHSLSGKAST 851
>gi|452821147|gb|EME28181.1| ubiquitin fusion degradation protein [Galdieria sulphuraria]
Length = 335
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 103/178 (57%), Positives = 142/178 (79%), Gaps = 1/178 (0%)
Query: 8 AAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYC 67
+F+R R YP+SFIDKP LENGDKIV+PPSALD L + + YPMLF+L +SAGRVT+C
Sbjct: 24 GSFQRNLRAYPVSFIDKPQLENGDKIVLPPSALDALTQMQVSYPMLFQLE-SSAGRVTHC 82
Query: 68 GVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKA 127
GVMEFIA+EG YLPYWMM+NM + EG++++++NA+L KG++VKL+P + +FL IS+PKA
Sbjct: 83 GVMEFIAEEGFAYLPYWMMQNMAVGEGELIKIRNANLPKGTFVKLRPQSSEFLAISDPKA 142
Query: 128 VLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
VLE LR++SCLT GDTI + Y N+ Y+I++++ +P A+SII+ D V+F PP D +
Sbjct: 143 VLEARLRNFSCLTQGDTIAIHYLNRIYWIDILQVQPGDAISIIDADVNVEFAPPADME 200
>gi|299117449|emb|CBN73952.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 351
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/250 (48%), Positives = 159/250 (63%), Gaps = 7/250 (2%)
Query: 9 AFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCG 68
FE +Y CYP+SF DK HLE GDKI++P SALD LA +EYPMLFELSN S G T+CG
Sbjct: 27 GFEEQYHCYPVSFQDKEHLEAGDKILLPSSALDALARQQVEYPMLFELSNPSQGNRTHCG 86
Query: 69 VMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAV 128
V+EF A EG Y+P+WMM+N+LL+ G ++ VKN SL KG++VK QP + DFL+ISNP+AV
Sbjct: 87 VLEFSAPEGSCYIPHWMMQNLLLEAGSLLTVKNVSLPKGTFVKFQPQSVDFLEISNPRAV 146
Query: 129 LETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPE 188
LETT+R +SCLT GD I +PYN++ Y + V E KPS AV I+ETD VDF P+ + E
Sbjct: 147 LETTMRHFSCLTEGDVICLPYNDRNYELAVKELKPSNAVGIVETDLNVDFDAPVGYDESL 206
Query: 189 KPSSSSLSNRTLPEVKEEPPLDFKGPEKPSS--SSLSNRTPPEVKEEPPKKIAKFSPFTG 246
S+++ + G + + S + P V E P KF PF G
Sbjct: 207 AASNAAAAAAAAAGTGGAVAGSSSGATGAINIPAPASGKAPKPVDEAP-----KFVPFGG 261
Query: 247 SGRCLNGKSS 256
G L+GK +
Sbjct: 262 GGARLDGKKT 271
>gi|209737186|gb|ACI69462.1| Ubiquitin fusion degradation protein 1 homolog [Salmo salar]
Length = 309
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 135/337 (40%), Positives = 196/337 (58%), Gaps = 58/337 (17%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRCY +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 19 FSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 79 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLMVATYSKFQPQSPDFLDITNP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD + + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 139 KAVLENALRNFACLTTGDVVAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198
Query: 186 EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFT 245
EPE+ +K PE+P+ T ++ +F FT
Sbjct: 199 EPERC--------------------YKAPEEPTEEEGDPNTWTDMD-------MRFRAFT 231
Query: 246 GSGRCLNG-KSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNANQ 304
GSG L+G K +P+ P P + GI + K G++ F N+
Sbjct: 232 GSGNRLDGKKKGIEPSPVPIDP------SDIKRGI-------PNYEYKVGRITFIRNS-- 276
Query: 305 SSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
+ LP+ ++ +E +F AF+G+ SLR
Sbjct: 277 ------RPLPRKTTE-----DEDSEFIAFSGEGKSLR 302
>gi|209737864|gb|ACI69801.1| Ubiquitin fusion degradation protein 1 homolog [Salmo salar]
gi|225705842|gb|ACO08767.1| Ubiquitin fusion degradation protein 1 homolog [Oncorhynchus
mykiss]
Length = 309
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 137/346 (39%), Positives = 196/346 (56%), Gaps = 62/346 (17%)
Query: 1 AYENHHDAAFERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFEL 56
A++N F +YRCY +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L
Sbjct: 14 AFQNR----FSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKL 69
Query: 57 SNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHT 116
+N ++ R+T+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP +
Sbjct: 70 TNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLMVATYSKFQPQS 129
Query: 117 KDFLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEV 176
DFLDI+NPKAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D V
Sbjct: 130 PDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNV 189
Query: 177 DFIPPLDFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPK 236
DF PL +KEPE+ +K PE+P+ T ++
Sbjct: 190 DFDAPLGYKEPER--------------------RYKAPEEPTEEEGDPSTWTDMD----- 224
Query: 237 KIAKFSPFTGSGRCLNG-KSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGK 295
+F FTGSG L+G K +P+ P P + GI + K G+
Sbjct: 225 --MRFRAFTGSGNRLDGKKKGIEPSPVPIDP------SDIKRGI-------PNYEYKVGR 269
Query: 296 LVFGSNANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
+ F N+ T + +E +F AF+G+ SLR
Sbjct: 270 ITFIRNSRPQPRKTTE-------------DEDSEFIAFSGEGQSLR 302
>gi|294954444|ref|XP_002788171.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239903386|gb|EER19967.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 326
Score = 238 bits (606), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 124/258 (48%), Positives = 164/258 (63%), Gaps = 14/258 (5%)
Query: 8 AAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYC 67
F+ +Y CYP+SF+ + LE G+KI++P SALD+LA L++ YPMLF++SN R T+C
Sbjct: 34 GTFDVQYHCYPVSFLGREELEKGNKILLPQSALDQLARLNVSYPMLFQISNLKEPRTTHC 93
Query: 68 GVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKA 127
GV+EF A+EG Y+PYWMM+N++LQEGDIV VKN SL KG VKLQP TKDFL+I NP+A
Sbjct: 94 GVLEFTAEEGFCYIPYWMMQNLVLQEGDIVRVKNVSLPKGRSVKLQPVTKDFLEIHNPRA 153
Query: 128 VLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEP 187
+LE +LR+++ LT GD I + YNNK + I VVE KP+ A+SIIE D V+F+ P D+ EP
Sbjct: 154 ILENSLRNFAALTAGDNIAIQYNNKTFEIEVVECKPANAISIIEADVSVEFLAPKDYVEP 213
Query: 188 EKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTGS 247
PS+S EE P G +SS + + E K F G
Sbjct: 214 -SPSASQ---------AEEMPGTSTGAPGTIASSDTQSNAENI--ESASLAGKTVLFQGK 261
Query: 248 GRCLNGK--SSTQPTVSP 263
G L+GK SS Q +P
Sbjct: 262 GMRLDGKPLSSKQAKATP 279
>gi|47226555|emb|CAG08571.1| unnamed protein product [Tetraodon nigroviridis]
Length = 309
Score = 238 bits (606), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 123/271 (45%), Positives = 174/271 (64%), Gaps = 37/271 (13%)
Query: 1 AYENHHDAAFERKYRCYPISFIDKPH----LENGDKIVMPPSALDRLAYLHIEYPMLFEL 56
A++N F +YRCY +S ++ P+ +E G KI+MPPSALD L+ L+I YPMLF+L
Sbjct: 14 AFQNR----FSTQYRCYSVSMLEGPNDRSDVEKGGKIIMPPSALDHLSRLNITYPMLFKL 69
Query: 57 SNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHT 116
+N ++ R+T+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP +
Sbjct: 70 TNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLMVATYSKFQPQS 129
Query: 117 KDFLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEV 176
DFLDI+NPKAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D V
Sbjct: 130 PDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNV 189
Query: 177 DFIPPLDFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPK 236
DF PL +KEPE+ P+ +EEP +G + S + +
Sbjct: 190 DFDAPLGYKEPERQ----------PQHQEEPT---EGEDASSYADMD------------- 223
Query: 237 KIAKFSPFTGSGRCLNGKS-STQPTVSPSSP 266
F FTGSG L+GK+ +P+ +P P
Sbjct: 224 --TGFRAFTGSGNRLDGKTKGIEPSPAPLGP 252
>gi|410923016|ref|XP_003974978.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Takifugu
rubripes]
Length = 309
Score = 237 bits (605), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 141/346 (40%), Positives = 199/346 (57%), Gaps = 61/346 (17%)
Query: 1 AYENHHDAAFERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFEL 56
A++N F +YRCY +S + D+ +E G KI+MPPSALD L+ L+I YPMLF+L
Sbjct: 14 AFQNR----FSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDHLSRLNITYPMLFKL 69
Query: 57 SNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHT 116
+N ++ R+T+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP +
Sbjct: 70 TNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLMVATYSKFQPQS 129
Query: 117 KDFLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEV 176
DFLDI+NPKAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D V
Sbjct: 130 PDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNV 189
Query: 177 DFIPPLDFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPK 236
DF PL +KEPE+ P+ +EEP +G + S + +
Sbjct: 190 DFDAPLGYKEPERQ----------PQHQEEPT---EGEDHSSYADMD------------- 223
Query: 237 KIAKFSPFTGSGRCLNGKS-STQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGK 295
F FTGSG L+GK+ +P+ +P P + GI + K G+
Sbjct: 224 --TGFRAFTGSGNRLDGKTKGIEPSPAPLDP------SDIKRGI-------PNYDFKIGR 268
Query: 296 LVFGSNANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
+ F N+ K PK + V KF AF+G+ SLR
Sbjct: 269 ITFIRNS--------KPQPKKFVDDDDAVN---KFIAFSGEGQSLR 303
>gi|157120562|ref|XP_001653665.1| ubiquitin fusion degradaton protein [Aedes aegypti]
gi|108874905|gb|EAT39130.1| AAEL009042-PB [Aedes aegypti]
Length = 301
Score = 236 bits (603), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 190/339 (56%), Gaps = 56/339 (16%)
Query: 6 HDAAFERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAG 62
H F Y+CY +S + ++ +ENG KI+MPPSALD+L L++EYPMLF+L+N
Sbjct: 12 HSRPFNTTYKCYSVSMLPGNERQDVENGGKIIMPPSALDQLTRLNVEYPMLFKLTNNKIN 71
Query: 63 RVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDI 122
R T+ GV+EF+ADEG IY+PYWMM N+LL EGDIV++++ SL Y K QP + +FLDI
Sbjct: 72 RSTHAGVLEFVADEGKIYIPYWMMHNLLLDEGDIVQIESVSLPVAKYSKFQPQSVEFLDI 131
Query: 123 SNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPL 182
+NPKAVLE LR+++CLTTGD I + YNN Y ++V+ETKP AV+IIE D V+F PP+
Sbjct: 132 TNPKAVLENCLRNFACLTTGDLIAIKYNNYTYELSVLETKPGPAVTIIECDMNVEFAPPV 191
Query: 183 DFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFS 242
+ EP+K + KEE P+ P E+ EP A F
Sbjct: 192 GYTEPQK------------KAKEEEPMAVD--------------PAELMPEP----AGFV 221
Query: 243 PFTGSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNA 302
F GSG L+GK +VS S+P + AN + G G L F
Sbjct: 222 AFKGSGSRLDGKKKKDGSVSESAP------AHRANYVRGIPDYD----HPFGLLRFD--- 268
Query: 303 NQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
+ + K S E Q EE P F+AF G +SL+
Sbjct: 269 --------RTVRKVESNEDKQ-EEDP-FEAFKGAGFSLK 297
>gi|157120560|ref|XP_001653664.1| ubiquitin fusion degradaton protein [Aedes aegypti]
gi|108874904|gb|EAT39129.1| AAEL009042-PA [Aedes aegypti]
Length = 303
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 190/339 (56%), Gaps = 56/339 (16%)
Query: 6 HDAAFERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAG 62
H F Y+CY +S + ++ +ENG KI+MPPSALD+L L++EYPMLF+L+N
Sbjct: 14 HSRPFNTTYKCYSVSMLPGNERQDVENGGKIIMPPSALDQLTRLNVEYPMLFKLTNNKIN 73
Query: 63 RVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDI 122
R T+ GV+EF+ADEG IY+PYWMM N+LL EGDIV++++ SL Y K QP + +FLDI
Sbjct: 74 RSTHAGVLEFVADEGKIYIPYWMMHNLLLDEGDIVQIESVSLPVAKYSKFQPQSVEFLDI 133
Query: 123 SNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPL 182
+NPKAVLE LR+++CLTTGD I + YNN Y ++V+ETKP AV+IIE D V+F PP+
Sbjct: 134 TNPKAVLENCLRNFACLTTGDLIAIKYNNYTYELSVLETKPGPAVTIIECDMNVEFAPPV 193
Query: 183 DFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFS 242
+ EP+K + KEE P+ P E+ EP A F
Sbjct: 194 GYTEPQK------------KAKEEEPMAVD--------------PAELMPEP----AGFV 223
Query: 243 PFTGSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNA 302
F GSG L+GK +VS S+P + AN + G G L F
Sbjct: 224 AFKGSGSRLDGKKKKDGSVSESAP------AHRANYVRGIPDYD----HPFGLLRFD--- 270
Query: 303 NQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
+ + K S E Q EE P F+AF G +SL+
Sbjct: 271 --------RTVRKVESNEDKQ-EEDP-FEAFKGAGFSLK 299
>gi|225715190|gb|ACO13441.1| Ubiquitin fusion degradation protein 1 homolog [Esox lucius]
Length = 309
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 137/346 (39%), Positives = 196/346 (56%), Gaps = 62/346 (17%)
Query: 1 AYENHHDAAFERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFEL 56
A++N F +YRCY +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L
Sbjct: 14 AFQNR----FSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKL 69
Query: 57 SNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHT 116
+N ++ R+T+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP +
Sbjct: 70 TNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLMVATYSKFQPQS 129
Query: 117 KDFLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEV 176
DFLDI+NPKAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D V
Sbjct: 130 PDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNV 189
Query: 177 DFIPPLDFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPK 236
DF PL +KEPE+ +K PE+P+ T ++
Sbjct: 190 DFDAPLGYKEPER--------------------RYKVPEEPTEEEGDPGTWTDMD----- 224
Query: 237 KIAKFSPFTGSGRCLNG-KSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGK 295
+F FTGSG L+G K +P+ P P + GI + K G+
Sbjct: 225 --MRFRAFTGSGNRLDGKKKGIEPSPVPIDP------SDIKRGI-------PNYEYKVGR 269
Query: 296 LVFGSNANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
+ F N+ T + +E +F AF+G+ SLR
Sbjct: 270 ITFIRNSRPQPRKTAE-------------DEDSEFIAFSGEGQSLR 302
>gi|66824919|ref|XP_645814.1| ubiquitin fusion degradation protein UFD1 family protein
[Dictyostelium discoideum AX4]
gi|74858159|sp|Q55BK0.1|UFD1_DICDI RecName: Full=Ubiquitin fusion degradation protein 1 homolog
gi|60473955|gb|EAL71893.1| ubiquitin fusion degradation protein UFD1 family protein
[Dictyostelium discoideum AX4]
Length = 330
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 105/187 (56%), Positives = 148/187 (79%), Gaps = 5/187 (2%)
Query: 5 HHDAA---FERKYRCYPISFI--DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNT 59
HH +E+K++ +PISF+ +K LE+G KI++PPSAL+ L+ L+I+YPMLFE+SN
Sbjct: 17 HHHGGPGRYEQKFKAFPISFLPKEKHSLESGGKILLPPSALNALSRLNIQYPMLFEISNP 76
Query: 60 SAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDF 119
+G+ ++CGV+EFIA+EG+ YLP WMM+N+ L+EG+ +++KNA+LAKG++VK+QP T +F
Sbjct: 77 ISGKKSHCGVLEFIAEEGICYLPLWMMQNLQLKEGEFIDIKNATLAKGTFVKIQPRTSNF 136
Query: 120 LDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFI 179
+DISNPKAVLE +LR ++ LT D IM+ YNN KYY+ VVE KP+ A+SIIE D VDF
Sbjct: 137 IDISNPKAVLENSLRKFATLTKDDEIMIDYNNTKYYLKVVELKPANAISIIEADVSVDFA 196
Query: 180 PPLDFKE 186
PP+D KE
Sbjct: 197 PPMDSKE 203
>gi|432873442|ref|XP_004072218.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Oryzias
latipes]
Length = 310
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 140/336 (41%), Positives = 196/336 (58%), Gaps = 54/336 (16%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRCY +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 19 FSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 79 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLMVATYSKFQPQSPDFLDITNP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 139 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198
Query: 186 EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFT 245
EPE+ S + ++EP E+P SS ++ F FT
Sbjct: 199 EPERRSQN----------QDEPT-----EEEPDPSSYADMD------------LGFRAFT 231
Query: 246 GSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNANQS 305
GSG L+GK+ + P NP AA+ I K + K GK+ F N+
Sbjct: 232 GSGNRLDGKTK---GIEP------NPVPLAASDI---KRGIPNYDFKVGKITFIRNSRPQ 279
Query: 306 SNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
P+ + + KF AF+G+ SLR
Sbjct: 280 --------PRRVVDDDDALN---KFIAFSGEGQSLR 304
>gi|229367492|gb|ACQ58726.1| Ubiquitin fusion degradation protein 1 homolog [Anoplopoma fimbria]
Length = 310
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 135/337 (40%), Positives = 193/337 (57%), Gaps = 56/337 (16%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRCY +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 19 FSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 79 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLMVATYSKFQPQSPDFLDITNP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD + + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 139 KAVLENALRNFACLTTGDVVAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198
Query: 186 EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFT 245
EPE+ P+ +EEP + P + L F FT
Sbjct: 199 EPER----------RPQHQEEPTEEEADPTNYADMDLG-----------------FRAFT 231
Query: 246 GSGRCLNGKS-STQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNANQ 304
GSG L+GK+ +P+ P P + K + K G++ F N+
Sbjct: 232 GSGNRLDGKTKGIEPSPVPLDP-------------SDIKRGIPNYEFKVGRITFIRNS-- 276
Query: 305 SSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
K LP+ + + +F AF+G+ SLR
Sbjct: 277 ------KPLPRKFLDDDDALN---RFIAFSGEGQSLR 304
>gi|226470046|emb|CAX70304.1| Ubiquitin fusion degradation protein 1 homolog [Schistosoma
japonicum]
Length = 305
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/273 (42%), Positives = 163/273 (59%), Gaps = 27/273 (9%)
Query: 10 FERKYRCYPISFID---KPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F YRCYP+SF+ + +E G KI+MPPSALD L L+++YPMLF+L+N A R T+
Sbjct: 13 FTTSYRCYPVSFLADNFRSSVEKGGKIIMPPSALDVLTRLNVQYPMLFKLTNQQANRTTH 72
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
CGV+EF+ADEG IY+PYWM++N+ L+EG +V V NA+L S+ + QP + DFLDISNPK
Sbjct: 73 CGVLEFVADEGRIYVPYWMLKNLHLEEGGLVSVVNAALPVASFARFQPQSTDFLDISNPK 132
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
AVLE LR ++CLT GD I + YN + Y + V+ETKP AV+IIE D VDF PP+ ++
Sbjct: 133 AVLENALRDFACLTVGDIIAISYNERIYELKVLETKPKDAVTIIECDMSVDFAPPVGYQS 192
Query: 187 PEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTG 246
+ S S L N +++E+ E P + F F+G
Sbjct: 193 TDSGSLSKLDNVDAHQIEED------------------------HIEIPSLVQGFQAFSG 228
Query: 247 SGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGI 279
+G L+GK+ T +S P +N G+
Sbjct: 229 TGYRLDGKTKQDKTNETNSDRPLGPSKNRERGV 261
>gi|56756593|gb|AAW26469.1| SJCHGC05907 protein [Schistosoma japonicum]
Length = 305
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 117/273 (42%), Positives = 163/273 (59%), Gaps = 27/273 (9%)
Query: 10 FERKYRCYPISFID---KPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F YRCYP+SF+ + +E G KI+MPPSALD L L+++YPMLF+L+N A R T+
Sbjct: 13 FTTSYRCYPVSFLADNFRSSVEKGGKIIMPPSALDVLTRLNVQYPMLFKLTNQQANRTTH 72
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
CGV+EF+ADEG IY+PYWM++N+ L+EG +V V NA+L S+ + QP + DFLDISNPK
Sbjct: 73 CGVLEFVADEGRIYVPYWMLKNLDLEEGGLVSVVNAALPVASFARFQPQSTDFLDISNPK 132
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
AVLE LR ++CLT GD I + YN + Y + V+ETKP AV+IIE D VDF PP+ ++
Sbjct: 133 AVLENALRDFACLTVGDIIAISYNERIYELKVLETKPKDAVTIIECDMSVDFAPPVGYQS 192
Query: 187 PEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTG 246
+ S S L N +++E+ E P + F F+G
Sbjct: 193 TDSGSLSKLDNVNAHQIEED------------------------HIEIPSLVQGFQAFSG 228
Query: 247 SGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGI 279
+G L+GK+ T +S P +N G+
Sbjct: 229 TGYRLDGKTKQDKTNETNSDRPLGPSKNRERGV 261
>gi|225704124|gb|ACO07908.1| Ubiquitin fusion degradation protein 1 homolog [Oncorhynchus
mykiss]
Length = 309
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 135/337 (40%), Positives = 195/337 (57%), Gaps = 58/337 (17%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YR Y +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 19 FSTQYRRYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 79 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLMVATYSKFQPQSPDFLDITNP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD + + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 139 KAVLENALRNFACLTTGDVVAINYNGKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198
Query: 186 EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFT 245
EPE+ +K PE+P+ T E+ +F FT
Sbjct: 199 EPERC--------------------YKAPEEPTDEEGDPNTWTEMD-------MRFRAFT 231
Query: 246 GSGRCLNG-KSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNANQ 304
GSG L+G K +P+ P P + GI + K G++ F N+
Sbjct: 232 GSGNRLDGKKKGIEPSPVPIDP------SDIKRGI-------PNYEYKVGRITFIRNS-- 276
Query: 305 SSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
+ LP+ ++ +E +F AF+G+ SLR
Sbjct: 277 ------RPLPRKTTE-----DEDSEFIAFSGEGKSLR 302
>gi|348527158|ref|XP_003451086.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog
[Oreochromis niloticus]
Length = 310
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 121/262 (46%), Positives = 170/262 (64%), Gaps = 32/262 (12%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRCY +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 19 FSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 79 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLMVATYSKFQPQSPDFLDITNP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 139 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198
Query: 186 EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFT 245
EPE+ P ++EP E+ SS ++ F FT
Sbjct: 199 EPER----------RPNHQDEPT-----EEETDPSSYADMD------------TGFRAFT 231
Query: 246 GSGRCLNGKS-STQPTVSPSSP 266
GSG L+GK+ +P+ +P +P
Sbjct: 232 GSGNRLDGKTKGIEPSPAPIAP 253
>gi|29840998|gb|AAP06011.1| similar to GenBank Accession Number AF228284 ubiquitin
fusion-degradation 1-like protein in Gallus gallus
[Schistosoma japonicum]
Length = 285
Score = 234 bits (596), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 117/273 (42%), Positives = 163/273 (59%), Gaps = 27/273 (9%)
Query: 10 FERKYRCYPISFID---KPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F YRCYP+SF+ + +E G KI+MPPSALD L L+++YPMLF+L+N A R T+
Sbjct: 13 FTTSYRCYPVSFLADNFRSSVEKGGKIIMPPSALDVLTRLNVQYPMLFKLTNQQANRTTH 72
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
CGV+EF+ADEG IY+PYWM++N+ L+EG +V V NA+L S+ + QP + DFLDISNPK
Sbjct: 73 CGVLEFVADEGRIYVPYWMLKNLHLEEGGLVSVVNAALPVASFARFQPQSTDFLDISNPK 132
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
AVLE LR ++CLT GD I + YN + Y + V+ETKP AV+IIE D VDF PP+ ++
Sbjct: 133 AVLENALRDFACLTVGDIIAISYNERIYELKVLETKPKDAVTIIECDMSVDFAPPVGYQS 192
Query: 187 PEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTG 246
+ S S L N +++E+ E P + F F+G
Sbjct: 193 TDSGSLSKLDNVDAHQIEED------------------------HIEIPSLVQGFQAFSG 228
Query: 247 SGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGI 279
+G L+GK+ T +S P +N G+
Sbjct: 229 TGYRLDGKTKQDKTNETNSDRPLGPSKNRERGV 261
>gi|225706076|gb|ACO08884.1| Ubiquitin fusion degradation protein 1 homolog [Osmerus mordax]
Length = 309
Score = 234 bits (596), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 137/346 (39%), Positives = 198/346 (57%), Gaps = 61/346 (17%)
Query: 1 AYENHHDAAFERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFEL 56
A++N F +YRCY +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L
Sbjct: 14 AFQNR----FSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKL 69
Query: 57 SNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHT 116
+N ++ R+T+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP +
Sbjct: 70 TNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLMVATYSKFQPQS 129
Query: 117 KDFLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEV 176
DFLDI+NPKAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D V
Sbjct: 130 PDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNV 189
Query: 177 DFIPPLDFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPK 236
DF PL +KEPE+ P+ EEP E+ ++S ++
Sbjct: 190 DFDAPLGYKEPER----------RPQHHEEPT-----EEEGDANSYADMD---------- 224
Query: 237 KIAKFSPFTGSGRCLNGK-SSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGK 295
F FTGSG L+GK +P+ P P + K + K G+
Sbjct: 225 --MGFRAFTGSGNRLDGKLKGIEPSPVPIDP-------------SDIKRGIPNYEYKVGR 269
Query: 296 LVFGSNANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
+ F N+ P+ + + +E +F AF+G+ SLR
Sbjct: 270 ITFIRNSRPQ--------PRRTMED----DELSRFIAFSGEGQSLR 303
>gi|50539970|ref|NP_001002451.1| ubiquitin fusion degradation protein 1 homolog [Danio rerio]
gi|49619115|gb|AAT68142.1| ubiquitin fusion degradation 1-like protein [Danio rerio]
gi|49902820|gb|AAH76020.1| Ubiquitin fusion degradation 1-like [Danio rerio]
gi|157423585|gb|AAI53587.1| Ubiquitin fusion degradation 1-like [Danio rerio]
gi|169154400|emb|CAQ13301.1| ubiquitin fusion degradation 1-like [Danio rerio]
Length = 308
Score = 234 bits (596), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 137/337 (40%), Positives = 189/337 (56%), Gaps = 58/337 (17%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRCY +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 19 FSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 79 HCGVLEFVADEGFCYLPHWMMQNLLLEEGGLVQVESVNLMVATYSKFQPQSPDFLDITNP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 139 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198
Query: 186 EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFT 245
EPE+ PE E D PS+ + F FT
Sbjct: 199 EPERHMQH-------PEEPAEEETD------PSNYDMD---------------LGFRAFT 230
Query: 246 GSGRCLNG-KSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNANQ 304
GSG L+G K +P+ +P P + K + K G++ F NA Q
Sbjct: 231 GSGNRLDGKKKGIEPSPAPLDP-------------SDIKRGIPNYEFKVGRITFIRNARQ 277
Query: 305 SSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
P+ + + E F AF+G+ SLR
Sbjct: 278 Q--------PRKTDLD----ETVSNFIAFSGEGQSLR 302
>gi|330844694|ref|XP_003294252.1| hypothetical protein DICPUDRAFT_51398 [Dictyostelium purpureum]
gi|325075328|gb|EGC29230.1| hypothetical protein DICPUDRAFT_51398 [Dictyostelium purpureum]
Length = 301
Score = 233 bits (595), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 105/187 (56%), Positives = 146/187 (78%), Gaps = 2/187 (1%)
Query: 10 FERKYRCYPISFI--DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYC 67
F +K++ YPISF+ +K LE+G KI++PPS+L+ L+ L+I+YPMLFE+SN GR ++C
Sbjct: 5 FNQKFKAYPISFLPKEKHSLESGGKILLPPSSLNTLSRLNIQYPMLFEISNPITGRTSHC 64
Query: 68 GVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKA 127
GV+EF A+EG+ YLPYWMM+N+ L E D +++K+A+L KG++VK+QP T +FLDISNPKA
Sbjct: 65 GVLEFTAEEGVCYLPYWMMQNLGLNETDFIDIKSATLPKGTFVKIQPRTSNFLDISNPKA 124
Query: 128 VLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEP 187
VLE +LR ++ LT + IM+ YNN KYY+ VVE KP+ A+SIIE D VDF PP+D KE
Sbjct: 125 VLENSLRKFATLTKDEEIMIDYNNNKYYLKVVEIKPANAISIIEADVSVDFAPPMDAKES 184
Query: 188 EKPSSSS 194
+ P+ SS
Sbjct: 185 QNPTPSS 191
>gi|226489142|emb|CAX74920.1| Ubiquitin fusion degradation protein 1 homolog [Schistosoma
japonicum]
Length = 256
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 113/254 (44%), Positives = 156/254 (61%), Gaps = 27/254 (10%)
Query: 10 FERKYRCYPISFID---KPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F YRCYP+SF+ + +E G KI+MPPSALD L L+++YPMLF+L+N A R T+
Sbjct: 13 FTTSYRCYPVSFLADNFRSSVEKGGKIIMPPSALDVLTRLNVQYPMLFKLTNQQANRTTH 72
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
CGV+EF+ADEG IY+PYWM++N+ L+EG +V V NA+L S+ + QP + DFLDISNPK
Sbjct: 73 CGVLEFVADEGRIYVPYWMLKNLHLEEGGLVSVVNAALPVASFARFQPQSTDFLDISNPK 132
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
AVLE LR ++CLT GD I + YN + Y + V+ETKP AV+IIE D VDF PP+ ++
Sbjct: 133 AVLENALRDFACLTVGDIIAISYNERIYELKVLETKPKDAVTIIECDMSVDFAPPVGYQS 192
Query: 187 PEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTG 246
+ S S L N +++E+ E P + F F+G
Sbjct: 193 TDSGSLSKLDNVDAHQIEED------------------------HIEIPSLVQGFQAFSG 228
Query: 247 SGRCLNGKSSTQPT 260
+G L+GK+ T
Sbjct: 229 TGYRLDGKTKQDKT 242
>gi|219115389|ref|XP_002178490.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410225|gb|EEC50155.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 385
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 101/188 (53%), Positives = 139/188 (73%), Gaps = 2/188 (1%)
Query: 10 FERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGV 69
FE +Y CY +++ DK LE GDKI++PPSA D LA L ++YPMLF+L T+ R T+CGV
Sbjct: 22 FEEQYHCYSVAYADKADLEKGDKILLPPSAFDTLARLQVDYPMLFQL--TAGDRTTHCGV 79
Query: 70 MEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVL 129
+EF A+EG +Y+P+WMM+N+L++E +V + N SL K ++VKLQP + DFL+ISNP+AVL
Sbjct: 80 LEFTAEEGCVYIPFWMMQNLLIEEAALVTITNVSLPKATFVKLQPQSVDFLEISNPRAVL 139
Query: 130 ETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEK 189
E LR++SC+T D I +PYNNK Y+ + E KPS A IIETDC VDF P+ +KEPE
Sbjct: 140 EHALRNFSCVTAHDIIQIPYNNKNYHFELKEVKPSPAACIIETDCNVDFDAPVGYKEPEY 199
Query: 190 PSSSSLSN 197
+S+ S+
Sbjct: 200 EPTSAQSS 207
>gi|417398706|gb|JAA46386.1| Putative ubiquitin fusion degradation protein 1 [Desmodus rotundus]
Length = 307
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 118/262 (45%), Positives = 165/262 (62%), Gaps = 34/262 (12%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRC+ +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 79 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 139 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198
Query: 186 EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFT 245
EPE+ +V+ E D + + L F F+
Sbjct: 199 EPER------------QVQHEESTDGEADHSGYAGELG-----------------FRAFS 229
Query: 246 GSGRCLNG-KSSTQPTVSPSSP 266
GSG L+G K +P+ SP P
Sbjct: 230 GSGNRLDGKKKGVEPSPSPIKP 251
>gi|209879537|ref|XP_002141209.1| ubiquitin fusion degradation protein 1 [Cryptosporidium muris RN66]
gi|209556815|gb|EEA06860.1| ubiquitin fusion degradation protein 1, putative [Cryptosporidium
muris RN66]
Length = 300
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 104/196 (53%), Positives = 147/196 (75%)
Query: 10 FERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGV 69
F +Y CYP+SF + LE G+KI++PPSAL++LA +I +PMLF++ N+ +VT+ GV
Sbjct: 26 FSHEYSCYPVSFAGRDELEAGNKILLPPSALNQLARRNISWPMLFKVQNSLKHKVTHSGV 85
Query: 70 MEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVL 129
+EF+A+EG Y+PYWMM+N+ LQEGDIV + N SL+KG+YVKLQP + +FLDI+NPKAVL
Sbjct: 86 LEFVAEEGTCYMPYWMMQNLELQEGDIVNITNTSLSKGTYVKLQPLSMEFLDITNPKAVL 145
Query: 130 ETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEK 189
ET LR ++ LT GDTI++ YN+ Y + ++ETKP+ A+SIIETD +VDF PP D+ EP
Sbjct: 146 ETALRGFATLTIGDTIVIQYNDASYKVEILETKPTNAISIIETDIQVDFAPPPDYVEPGV 205
Query: 190 PSSSSLSNRTLPEVKE 205
++ S+ L +E
Sbjct: 206 QQIATTSDEFLGTSRE 221
>gi|16758158|ref|NP_445870.1| ubiquitin fusion degradation protein 1 homolog [Rattus norvegicus]
gi|81881868|sp|Q9ES53.1|UFD1_RAT RecName: Full=Ubiquitin fusion degradation protein 1 homolog;
Short=UB fusion protein 1
gi|11037254|gb|AAG27535.1|AF234601_1 UFD1 [Rattus norvegicus]
gi|149019812|gb|EDL77960.1| ubiquitin fusion degradation 1-like [Rattus norvegicus]
gi|171846755|gb|AAI61818.1| Ubiquitin fusion degradation 1 like (yeast) [Rattus norvegicus]
Length = 307
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 117/262 (44%), Positives = 166/262 (63%), Gaps = 34/262 (12%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRC+ +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 79 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 139 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198
Query: 186 EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFT 245
EPE+P V+ E ++ + + + F F+
Sbjct: 199 EPERP------------VQHEESIEGEADHSGYAGEVG-----------------FRAFS 229
Query: 246 GSGRCLNG-KSSTQPTVSPSSP 266
GSG L+G K +P+ SP P
Sbjct: 230 GSGNRLDGKKKGVEPSPSPIKP 251
>gi|427782195|gb|JAA56549.1| Putative ubiquitin fusion-degradation protein [Rhipicephalus
pulchellus]
Length = 303
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 140/346 (40%), Positives = 191/346 (55%), Gaps = 61/346 (17%)
Query: 2 YENHHDAAFERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSN 58
+ +H F +YR Y +S + ++ +E G KI+MPPSALD L L+I YPMLF+L+N
Sbjct: 7 FHDHLARPFNTQYRSYSVSMLPGNERQDVERGGKIIMPPSALDHLTRLNIVYPMLFKLTN 66
Query: 59 TSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKD 118
+ R T+CGV+EF+ADEG +YLPYWM N+LL EGDIV+V++A+L ++ K QP + D
Sbjct: 67 KKSNRETHCGVLEFVADEGKVYLPYWMQRNLLLDEGDIVQVESATLPVATFSKFQPLSVD 126
Query: 119 FLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDF 178
FLDI+NPKAVLE LR+++CL+TGD I + YNNK Y + V+ETKP AVSIIE D VDF
Sbjct: 127 FLDITNPKAVLENALRNFACLSTGDIIAIEYNNKNYELCVLETKPGKAVSIIECDMNVDF 186
Query: 179 IPPLDFKEPEKPSSSSLSNRTLPEVKE-EPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKK 237
PP+ +KEPE R P+ +E E +D+ E EP
Sbjct: 187 APPVGYKEPEP--------RNAPKAQEKEAEMDYAAFET----------------EP--- 219
Query: 238 IAKFSPFTGSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGS--KSSSASSRQKSGK 295
F F+G+G L+GK+ Q+ AAN + + K G
Sbjct: 220 -TGFVAFSGTGNRLDGKNRC--------------QEAAANSMVKAIPKRGIPDYDYVIGT 264
Query: 296 LVFGSNANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
L F A P V E + + K +F AF+GK +SLR
Sbjct: 265 LRFIRTAR------PTV-------EDTEAKTKDEFSAFSGKAHSLR 297
>gi|344295036|ref|XP_003419220.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog
[Loxodonta africana]
Length = 444
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 118/262 (45%), Positives = 164/262 (62%), Gaps = 34/262 (12%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRC+ +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 156 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 215
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 216 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 275
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 276 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 335
Query: 186 EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFT 245
EPE+ +V E D + + L F F+
Sbjct: 336 EPER------------QVPHEESTDGEADHSGYAGELG-----------------FRAFS 366
Query: 246 GSGRCLNG-KSSTQPTVSPSSP 266
GSG L+G K +P+ SP P
Sbjct: 367 GSGNRLDGKKKGVEPSPSPIKP 388
>gi|257153392|ref|NP_035802.3| ubiquitin fusion degradation protein 1 homolog [Mus musculus]
gi|342187103|sp|P70362.2|UFD1_MOUSE RecName: Full=Ubiquitin fusion degradation protein 1 homolog;
Short=UB fusion protein 1
gi|13879310|gb|AAH06630.1| Ubiquitin fusion degradation 1 like [Mus musculus]
gi|74139416|dbj|BAE40849.1| unnamed protein product [Mus musculus]
gi|74151171|dbj|BAE27708.1| unnamed protein product [Mus musculus]
gi|148665119|gb|EDK97535.1| ubiquitin fusion degradation 1 like [Mus musculus]
Length = 307
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 117/262 (44%), Positives = 166/262 (63%), Gaps = 34/262 (12%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRC+ +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 79 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 139 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198
Query: 186 EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFT 245
EPE+P V+ E ++ + + + F F+
Sbjct: 199 EPERP------------VQHEESIEGEADHSGYAGEVG-----------------FRAFS 229
Query: 246 GSGRCLNG-KSSTQPTVSPSSP 266
GSG L+G K +P+ SP P
Sbjct: 230 GSGNRLDGKKKGVEPSPSPIKP 251
>gi|345479998|ref|XP_001605370.2| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Nasonia
vitripennis]
Length = 294
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 134/337 (39%), Positives = 187/337 (55%), Gaps = 63/337 (18%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F +Y+C+ +S + ++ +E G KI+MPPSALD L L+I YPMLF+L+N R+T+
Sbjct: 12 FNTQYKCFSVSMLPGNERQDVERGGKIIMPPSALDTLTRLNIVYPMLFKLTNKKTNRITH 71
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
CGV+EF+ADEG +YLPYWMM N+LLQEG+I+ V+ SL +Y + QP ++DFLDI+NPK
Sbjct: 72 CGVLEFVADEGKVYLPYWMMHNLLLQEGEILNVECVSLPVATYARFQPQSEDFLDITNPK 131
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
AVLE LR+++CLTTGD I + YN + Y + V+ETKP +AV+IIE D V+F PP+ +KE
Sbjct: 132 AVLENGLRNFACLTTGDVIAIKYNARIYEMCVLETKPGSAVTIIECDMNVEFAPPVGYKE 191
Query: 187 PEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTG 246
PEKP S KEE +D P ++ EP F F G
Sbjct: 192 PEKPVS-----------KEEDNVD----------------PVDLMPEP----TGFVAFKG 220
Query: 247 SGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVF--GSNANQ 304
G L+GK + SA + S K V+ G
Sbjct: 221 QGNRLDGK---------------------------KRKESAPTETASDKPVYVRGIPDYD 253
Query: 305 SSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
GT K L +V+++ +F+AF G+ +SLR
Sbjct: 254 YKIGTLKFLRNVKPVNVKEVKDQDEFKAFMGEGFSLR 290
>gi|432094843|gb|ELK26251.1| Ubiquitin fusion degradation protein 1 like protein [Myotis
davidii]
Length = 349
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 117/262 (44%), Positives = 165/262 (62%), Gaps = 34/262 (12%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRC+ +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 61 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 120
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 121 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 180
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 181 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 240
Query: 186 EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFT 245
EPE+ +V+ E + + + L F F+
Sbjct: 241 EPER------------QVQHEESTEGEADHSGYAGELG-----------------FRAFS 271
Query: 246 GSGRCLNG-KSSTQPTVSPSSP 266
GSG L+G K +P+ SP P
Sbjct: 272 GSGNRLDGKKKGVEPSPSPIKP 293
>gi|12845923|dbj|BAB26956.1| unnamed protein product [Mus musculus]
Length = 307
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 117/262 (44%), Positives = 165/262 (62%), Gaps = 34/262 (12%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRC+ +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 79 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR ++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 139 KAVLENALRDFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198
Query: 186 EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFT 245
EPE+P V+ E ++ + + + F F+
Sbjct: 199 EPERP------------VQHEESIEGEADHSGYAGEVG-----------------FRAFS 229
Query: 246 GSGRCLNG-KSSTQPTVSPSSP 266
GSG L+G K +P+ SP P
Sbjct: 230 GSGNRLDGKKKGVEPSPSPIKP 251
>gi|291232137|ref|XP_002736002.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog
[Saccoglossus kowalevskii]
Length = 305
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 139/335 (41%), Positives = 191/335 (57%), Gaps = 55/335 (16%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ +YRCY +S + ++ +E G KI+MPPSALD+L+ L+I YPMLF+L+N R+T+
Sbjct: 14 FKTQYRCYSVSMLPGNERQDVEKGGKIIMPPSALDQLSRLNIVYPMLFKLTNKKTDRMTH 73
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EF+ADEG IYLPYW+M N+LL+EG +V+V++ASL +Y K QP DFLDI+NPK
Sbjct: 74 SGVLEFVADEGKIYLPYWLMRNLLLEEGGLVQVESASLPVATYSKFQPQASDFLDITNPK 133
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
AVLE LRS++CLTTGD + + YN K Y + V+ETKP AVSIIE D V+F P+ +KE
Sbjct: 134 AVLENALRSFACLTTGDIVAIKYNKKDYELLVMETKPGKAVSIIECDMSVEFDAPVGYKE 193
Query: 187 PEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTG 246
PE R LP PL+ + S+ +R F F G
Sbjct: 194 PE---------RQLP----HQPLESEDMSIDSADLAVDR---------------FVAFQG 225
Query: 247 SGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNANQSS 306
SG L+GK + T + SS ++ Q GI + K GK+ F
Sbjct: 226 SGHRLDGKK--KRTETKSSNIL---QSTYTRGI-------PNYEYKKGKITFIR------ 267
Query: 307 NGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
PK + K+ GE +P+F+AF+G LR
Sbjct: 268 --APKPVDKTQEGE----NSEPQFEAFSGAGQPLR 296
>gi|119497287|ref|XP_001265403.1| ubiquitin fusion degradation protein Ufd1, putative [Neosartorya
fischeri NRRL 181]
gi|119413565|gb|EAW23506.1| ubiquitin fusion degradation protein Ufd1, putative [Neosartorya
fischeri NRRL 181]
Length = 384
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 146/353 (41%), Positives = 199/353 (56%), Gaps = 37/353 (10%)
Query: 6 HDAA---FERKYRCYPISFIDKPHLEN---GDKIVMPPSALDRLAYLHIEYPMLFELSNT 59
H AA F+ YRCYP++ + P EN G K++MPPSALD+L LHI YPMLFEL N
Sbjct: 12 HGAATRRFDEYYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNG 71
Query: 60 SAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDF 119
+ R+T+ GV+EFIA+EG IYLP+W+M+ +LL+ GD+V+VK+ L G ++KLQ + F
Sbjct: 72 AKERMTHAGVLEFIAEEGKIYLPFWLMQTLLLEPGDLVQVKSTDLPPGQFIKLQAQSTSF 131
Query: 120 LDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPS---TAVSIIETDCEV 176
LDIS+PKAVLE R++SCLT GD YN++ Y + V+ETKPS AVS++ETD EV
Sbjct: 132 LDISDPKAVLENAFRNFSCLTKGDVFTFAYNDQVYEMAVLETKPSNNTNAVSVLETDLEV 191
Query: 177 DFIPPLDFKEPEKPSSSS--LSNRTLPEVKEEPPLDFKGPEKPSSSSLS-NRTPPEVKEE 233
DF PP+ ++E ++PS +S LS + + P P + +++ PE +
Sbjct: 192 DFAPPVGYEEIQRPSGTSTPLSGVS----GKLPSGGLLHPHGTMAQAINYAAIAPESTDA 247
Query: 234 PPKKIAKFSPFTGSGRCLNG-KSSTQPTVSPSSPL--IDNPQQ-NAANGINGSKSSSASS 289
A S F G+ LN K S PT PS+P+ NPQ A NG +
Sbjct: 248 ATGAKAVSSNFLLGGQRLNAKKGSKAPTPKPSTPVPGATNPQHPPPARRTNGPQ----PL 303
Query: 290 RQKSGKLVFGSNANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
R +L FG + P GE Q EKP+FQ G +LRG
Sbjct: 304 RLPHNQLFFGY----------AIKPVKKRGEDGQAIEKPRFQ---GTGQTLRG 343
>gi|443694098|gb|ELT95315.1| hypothetical protein CAPTEDRAFT_175414 [Capitella teleta]
Length = 304
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 115/254 (45%), Positives = 159/254 (62%), Gaps = 29/254 (11%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F++ YRCY +S + ++ ++ G KI+MPPSALD+L L+IEYPMLF+L+N R T+
Sbjct: 16 FKQTYRCYSVSMLPGQERQDVDKGGKIIMPPSALDQLTRLNIEYPMLFKLTNEKMNRETH 75
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
CGV+EF+ADEG IYLPYWMM N+LL+EG +V ++N SL ++ K +P + DFLDISNPK
Sbjct: 76 CGVLEFVADEGRIYLPYWMMTNLLLEEGSLVHLENMSLPVATFAKFEPQSVDFLDISNPK 135
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
AVLE LR+++CLTTGD + + YN K Y + V+ETKP AV+IIE D VDF PP+ ++E
Sbjct: 136 AVLENNLRNFACLTTGDMLAIKYNEKIYEMRVLETKPGKAVTIIECDMNVDFAPPVGYQE 195
Query: 187 PEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTG 246
PE P + + E E+ + + S KF F+G
Sbjct: 196 PEVP-------KKVEEEHEQEDMSVDDIDFVDHS-------------------KFRAFSG 229
Query: 247 SGRCLNGKSSTQPT 260
SG L+GK Q +
Sbjct: 230 SGNRLDGKRRNQDS 243
>gi|66357078|ref|XP_625717.1| ubiquitin fusion degradation protein (UFD1); double Psi beta barrel
fold [Cryptosporidium parvum Iowa II]
gi|46226648|gb|EAK87627.1| ubiquitin fusion degradation protein (UFD1); double Psi beta barrel
fold [Cryptosporidium parvum Iowa II]
gi|323509281|dbj|BAJ77533.1| cgd4_1200 [Cryptosporidium parvum]
Length = 322
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 105/184 (57%), Positives = 139/184 (75%)
Query: 10 FERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGV 69
F +Y CYP+SF + LE G+KI++PPSAL++LA +I +PMLF++SN + + T+ GV
Sbjct: 44 FINEYSCYPVSFAGRDELEGGNKILLPPSALNQLARRNITWPMLFQISNPAKNKFTHSGV 103
Query: 70 MEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVL 129
+EF+A+EG Y+PYWMM+N+ LQEGDI + N SL+KG+YVK P + DFLDISNPKAVL
Sbjct: 104 LEFVAEEGTCYMPYWMMQNLELQEGDITSIMNTSLSKGTYVKFMPLSMDFLDISNPKAVL 163
Query: 130 ETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEK 189
ETTLR+++ LT GD I + YNN Y INV+ETKP+ A+SIIETD +VDF PP D+ E
Sbjct: 164 ETTLRNFATLTVGDIITIHYNNNSYRINVLETKPNNAISIIETDIQVDFAPPPDYVEDYN 223
Query: 190 PSSS 193
S S
Sbjct: 224 KSES 227
>gi|45383542|ref|NP_989632.1| ubiquitin fusion degradation protein 1 homolog [Gallus gallus]
gi|15426003|gb|AAK97650.1|AF407671_1 ubiquitin fusion-degradation 1-like protein [Gallus gallus]
gi|12656073|gb|AAK00732.1| ubiquitin fusion-degradation 1-like protein [Gallus gallus]
Length = 307
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 118/262 (45%), Positives = 164/262 (62%), Gaps = 34/262 (12%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRC+ +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 79 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LRS++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 139 KAVLENALRSFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198
Query: 186 EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFT 245
EPE+ + + E D + S + F F+
Sbjct: 199 EPERSA------------QHEETTDVEADHSGYVSDVG-----------------FRAFS 229
Query: 246 GSGRCLNG-KSSTQPTVSPSSP 266
GSG L+G K +P+ SP P
Sbjct: 230 GSGNRLDGKKKGVEPSPSPIKP 251
>gi|426247979|ref|XP_004017745.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Ovis
aries]
Length = 328
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 103/184 (55%), Positives = 141/184 (76%), Gaps = 4/184 (2%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRC+ +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ RVT
Sbjct: 41 FSTQYRCFSVSMLAGPNDRSDVERGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRVT 100
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 101 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 160
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 161 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 220
Query: 186 EPEK 189
EPE+
Sbjct: 221 EPER 224
>gi|355784789|gb|EHH65640.1| Ubiquitin fusion degradation protein 1-like protein, partial
[Macaca fascicularis]
Length = 306
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 117/262 (44%), Positives = 165/262 (62%), Gaps = 34/262 (12%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRC+ +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 18 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 77
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 78 HCGVLEFVADEGICYLPHWMMQNLLLEEGSLVQVESVNLQVATYSKFQPQSPDFLDITNP 137
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 138 KAVLENALRNFACLTTGDVIAIKYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 197
Query: 186 EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFT 245
EPE+ +V+ E + + + L F F+
Sbjct: 198 EPER------------QVQHEESTEGEAGHSGYAGELG-----------------FRAFS 228
Query: 246 GSGRCLNG-KSSTQPTVSPSSP 266
GSG L+G K +P+ SP P
Sbjct: 229 GSGNRLDGKKKGVEPSPSPIKP 250
>gi|387915964|gb|AFK11591.1| ubiquitin fusion degradation protein 1-like protein [Callorhinchus
milii]
gi|392883700|gb|AFM90682.1| ubiquitin fusion degradation protein 1-like protein [Callorhinchus
milii]
Length = 307
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 140/335 (41%), Positives = 188/335 (56%), Gaps = 55/335 (16%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F +YRCY +S D+ +E G KI+MPPS+LD+L+ L I YPMLF+L+N RVT+
Sbjct: 19 FSTQYRCYSVSMFAGSDRSDVEKGGKIIMPPSSLDQLSRLSITYPMLFKLANKRTERVTH 78
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
CGV+EF+A+EG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K +P DFLDI+NPK
Sbjct: 79 CGVLEFVAEEGICYLPHWMMQNLLLEEGGLVQVESVNLMVATYSKFEPQAPDFLDITNPK 138
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
AVLE LR+++CLTTGD I + YN K Y + V+ETKP TAVSIIE D VDF PL +KE
Sbjct: 139 AVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDTAVSIIECDMNVDFDAPLGYKE 198
Query: 187 PEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTG 246
PE+ S K E LD PE+ + + F FTG
Sbjct: 199 PERFS------------KHEDSLDLD-PEEAAFLAAD---------------LGFRAFTG 230
Query: 247 SGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNANQSS 306
SG L+GK + V PS I NP+ K + K GK+ F N S
Sbjct: 231 SGNRLDGK---KKGVEPSPAHI-NPED--------IKRGIPNYDFKIGKITFIRN----S 274
Query: 307 NGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
P+ L + +F AF+G+ SLR
Sbjct: 275 RPQPRRLDDEAG--------TSRFVAFSGEGQSLR 301
>gi|170058545|ref|XP_001864967.1| ubiquitin fusion degradation protein 1 [Culex quinquefasciatus]
gi|167877599|gb|EDS40982.1| ubiquitin fusion degradation protein 1 [Culex quinquefasciatus]
Length = 302
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 133/339 (39%), Positives = 191/339 (56%), Gaps = 55/339 (16%)
Query: 6 HDAAFERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAG 62
H F Y+CY +S + ++ +ENG KI+MPPSALD+L L++EYPMLF+L+N
Sbjct: 12 HSRPFNTTYKCYSVSMLPGNERQDVENGGKIIMPPSALDQLTRLNVEYPMLFKLTNNKIN 71
Query: 63 RVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDI 122
R T+ GV+EF+ADEG IY+PYWMM N+LL+EGDIV++++ S+ +Y K QP +FLDI
Sbjct: 72 RSTHAGVLEFVADEGKIYIPYWMMHNLLLEEGDIVQIESVSIPVATYSKFQPQNVEFLDI 131
Query: 123 SNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPL 182
+NPKAVLE LR+++CLTTGD I + YNN + ++V+ETKP AV+IIE D V+F PP+
Sbjct: 132 TNPKAVLENCLRNFACLTTGDLIAIKYNNTSFELSVLETKPGPAVTIIECDMNVEFAPPV 191
Query: 183 DFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFS 242
+ EP+K + KEE P+ P E+ EP A F
Sbjct: 192 GYTEPQK------------KPKEEEPMAVD--------------PAELMPEP----AGFV 221
Query: 243 PFTGSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNA 302
F G+G L+GK + ++P+ + N GI G L F
Sbjct: 222 AFKGAGTRLDGKKKKDNGANEAAPVA---RANYVRGI-------PDYEHPFGLLRFD--- 268
Query: 303 NQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
+ + K+ + E + EE P F+AF G+ +SL+
Sbjct: 269 --------RTVRKAEANEGGKPEEDP-FKAFQGEGFSLK 298
>gi|358366891|dbj|GAA83511.1| ubiquitin fusion degradation protein Ufd1 [Aspergillus kawachii IFO
4308]
Length = 366
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 141/350 (40%), Positives = 197/350 (56%), Gaps = 31/350 (8%)
Query: 6 HDAA--FERKYRCYPISFIDKPHLEN---GDKIVMPPSALDRLAYLHIEYPMLFELSNTS 60
H AA F+ YRCYP++ + P EN G K++MPPSALD+L LHI YPMLFEL N +
Sbjct: 23 HGAARRFDEYYRCYPVAMMPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGA 82
Query: 61 AGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFL 120
R+T+ GV+EFIA+EG IYLP+W+M+ +LL+ GD+V+VK+ L G ++KLQ + FL
Sbjct: 83 RERLTHAGVLEFIAEEGKIYLPFWLMQTLLLEPGDLVQVKSTDLPPGQFIKLQAQSTSFL 142
Query: 121 DISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVD 177
DIS+PKAVLE R++SCLT GD YN++ Y + V+ETKPST A+S++ETD EVD
Sbjct: 143 DISDPKAVLENAFRNFSCLTKGDVFTFAYNDQVYEMAVLETKPSTDTNAISVLETDLEVD 202
Query: 178 FIPPLDFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLS-NRTPPEVKEEPPK 236
F PP+ ++EP++PS +S + + P P + +++ PE +
Sbjct: 203 FAPPVGYEEPQRPSGTSTPRSGV--GNKLPSGGLLHPHGTMAQAINYAAIAPESTDAAAG 260
Query: 237 KIAKFSPFTGSGRCLN---GKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKS 293
A S F G+ LN G ++ P S +P NPQ R+ +
Sbjct: 261 ARAVSSNFLTGGQRLNAKKGSKTSTPKPSTPTPGTTNPQH------------PPPVRKTN 308
Query: 294 GKLVFGSNANQSSNGTPKVLPKSSSGEPPQV-EEKPKFQAFTGKKYSLRG 342
G NQ G P + P E QV E+KP+FQ G +LRG
Sbjct: 309 GPQPLRIGHNQLFFGYP-IKPVKKRDESGQVLEDKPRFQ---GAGQTLRG 354
>gi|387019599|gb|AFJ51917.1| Ubiquitin fusion degradation 1 [Crotalus adamanteus]
Length = 307
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 118/262 (45%), Positives = 164/262 (62%), Gaps = 34/262 (12%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRC+ +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 79 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 139 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198
Query: 186 EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFT 245
EPE+ +S E D + + L F F+
Sbjct: 199 EPERQAS------------HEESADVEADHSGYVNDLG-----------------FRAFS 229
Query: 246 GSGRCLNG-KSSTQPTVSPSSP 266
GSG L+G K +P+ SP P
Sbjct: 230 GSGNRLDGKKKGVEPSPSPIKP 251
>gi|359323018|ref|XP_850373.3| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Canis
lupus familiaris]
gi|410977170|ref|XP_003994983.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Felis
catus]
Length = 307
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 117/262 (44%), Positives = 165/262 (62%), Gaps = 34/262 (12%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRC+ +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 79 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 139 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198
Query: 186 EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFT 245
EPE+ +V+ E + + + L F F+
Sbjct: 199 EPER------------QVQHEESAEGEADHSGYAGELG-----------------FRAFS 229
Query: 246 GSGRCLNG-KSSTQPTVSPSSP 266
GSG L+G K +P+ SP P
Sbjct: 230 GSGNRLDGKKKGVEPSPSPIKP 251
>gi|29501813|ref|NP_005650.2| ubiquitin fusion degradation protein 1 homolog isoform A [Homo
sapiens]
gi|149758697|ref|XP_001488669.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Equus
caballus]
gi|301770447|ref|XP_002920655.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog
[Ailuropoda melanoleuca]
gi|332262705|ref|XP_003280400.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog isoform 1
[Nomascus leucogenys]
gi|397485938|ref|XP_003814093.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog isoform 1
[Pan paniscus]
gi|160332310|sp|Q92890.3|UFD1_HUMAN RecName: Full=Ubiquitin fusion degradation protein 1 homolog;
Short=UB fusion protein 1
gi|4741983|gb|AAD28788.1|AF141201_1 ubiquitin fusion-degradation 1 protein [Homo sapiens]
gi|12053683|emb|CAC20414.1| ubiquitin fusion degradation 1 protein [Homo sapiens]
gi|12654447|gb|AAH01049.1| Ubiquitin fusion degradation 1 like (yeast) [Homo sapiens]
gi|13477241|gb|AAH05087.1| Ubiquitin fusion degradation 1 like (yeast) [Homo sapiens]
gi|21392363|gb|AAM48288.1| ubiquitin fusion degradation 1-like [Homo sapiens]
gi|47678745|emb|CAG30493.1| UFD1L [Homo sapiens]
gi|109451548|emb|CAK54634.1| UFD1L [synthetic construct]
gi|109452142|emb|CAK54933.1| UFD1L [synthetic construct]
gi|117644502|emb|CAL37746.1| hypothetical protein [synthetic construct]
gi|119623443|gb|EAX03038.1| ubiquitin fusion degradation 1 like (yeast), isoform CRA_b [Homo
sapiens]
gi|261859826|dbj|BAI46435.1| ubiquitin fusion degradation 1 like [synthetic construct]
gi|410213858|gb|JAA04148.1| ubiquitin fusion degradation 1 like [Pan troglodytes]
gi|410262416|gb|JAA19174.1| ubiquitin fusion degradation 1 like [Pan troglodytes]
gi|410288576|gb|JAA22888.1| ubiquitin fusion degradation 1 like [Pan troglodytes]
gi|410336321|gb|JAA37107.1| ubiquitin fusion degradation 1 like [Pan troglodytes]
Length = 307
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 117/262 (44%), Positives = 165/262 (62%), Gaps = 34/262 (12%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRC+ +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 79 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 139 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198
Query: 186 EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFT 245
EPE+ +V+ E + + + L F F+
Sbjct: 199 EPER------------QVQHEESTEGEADHSGYAGELG-----------------FRAFS 229
Query: 246 GSGRCLNG-KSSTQPTVSPSSP 266
GSG L+G K +P+ SP P
Sbjct: 230 GSGNRLDGKKKGVEPSPSPIKP 251
>gi|426393528|ref|XP_004063071.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog isoform 1
[Gorilla gorilla gorilla]
Length = 307
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 117/262 (44%), Positives = 165/262 (62%), Gaps = 34/262 (12%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRC+ +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 79 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 139 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198
Query: 186 EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFT 245
EPE+ +V+ E + + + L F F+
Sbjct: 199 EPER------------QVQHEESTESEADHSGYAGELG-----------------FRAFS 229
Query: 246 GSGRCLNG-KSSTQPTVSPSSP 266
GSG L+G K +P+ SP P
Sbjct: 230 GSGNRLDGKKKGVEPSPSPIKP 251
>gi|383873009|ref|NP_001244660.1| ubiquitin fusion degradation protein 1 homolog [Macaca mulatta]
gi|380783603|gb|AFE63677.1| ubiquitin fusion degradation protein 1 homolog isoform A [Macaca
mulatta]
Length = 307
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 117/262 (44%), Positives = 165/262 (62%), Gaps = 34/262 (12%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRC+ +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 79 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 139 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198
Query: 186 EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFT 245
EPE+ +V+ E + + + L F F+
Sbjct: 199 EPER------------QVQHEESTEGEAGHSGYAGELG-----------------FRAFS 229
Query: 246 GSGRCLNG-KSSTQPTVSPSSP 266
GSG L+G K +P+ SP P
Sbjct: 230 GSGNRLDGKKKGVEPSPSPIKP 251
>gi|355563458|gb|EHH20020.1| Ubiquitin fusion degradation protein 1-like protein, partial
[Macaca mulatta]
Length = 306
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 117/262 (44%), Positives = 165/262 (62%), Gaps = 34/262 (12%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRC+ +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 18 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 77
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 78 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 137
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 138 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 197
Query: 186 EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFT 245
EPE+ +V+ E + + + L F F+
Sbjct: 198 EPER------------QVQHEESTEGEAGHSGYAGELG-----------------FRAFS 228
Query: 246 GSGRCLNG-KSSTQPTVSPSSP 266
GSG L+G K +P+ SP P
Sbjct: 229 GSGNRLDGKKKGVEPSPSPIKP 250
>gi|317139938|ref|XP_003189216.1| ubiquitin fusion degradation protein Ufd1 [Aspergillus oryzae
RIB40]
Length = 374
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 138/345 (40%), Positives = 196/345 (56%), Gaps = 29/345 (8%)
Query: 10 FERKYRCYPISFIDKPHLEN---GDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYP++ + P EN G K++MPPSALD+L LHI YPMLFEL N + R+T+
Sbjct: 35 FDEYYRCYPVAMMPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGARERLTH 94
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EFIA+EG IYLP+W+M+ +LL+ GD+V+VK+ L G ++KLQ + FLDIS+PK
Sbjct: 95 AGVLEFIAEEGKIYLPFWLMQTLLLEPGDLVQVKSTDLPPGQFIKLQAQSTSFLDISDPK 154
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIPPLD 183
AVLE R++SCLT GD YN++ Y + V+ETKP+T A+S++ETD EVDF PP+
Sbjct: 155 AVLENAFRNFSCLTKGDVFTFAYNDQVYEMAVLETKPATNSNAISVLETDLEVDFAPPVG 214
Query: 184 FKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLS-NRTPPEVKEEPPKKIAKFS 242
++EP++PS +S + R+ + P P + S++ PE + A S
Sbjct: 215 YEEPQRPSGTS-TPRSGVSATKLPAGGLLHPHGTMAQSINYAAIAPESTDAAAGAKAVSS 273
Query: 243 PFTGSGRCLNGKSSTQ---PTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFG 299
F G+ LN K ++ P S +P NPQ R+ +G +
Sbjct: 274 NFLIGGQRLNAKKGSKAPTPKASTPTPGATNPQH------------PPPVRRTNGPMPLR 321
Query: 300 SNANQSSNGTPKVLPKSSSGEPPQV--EEKPKFQAFTGKKYSLRG 342
NQ G + P E QV +EKP+FQ G +LRG
Sbjct: 322 LPPNQLFFGY-AIKPVQKRDESGQVVEDEKPRFQ---GSGQTLRG 362
>gi|321467795|gb|EFX78783.1| hypothetical protein DAPPUDRAFT_231070 [Daphnia pulex]
Length = 302
Score = 231 bits (588), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 104/188 (55%), Positives = 142/188 (75%), Gaps = 3/188 (1%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F +YRCY +S + ++ +E G KI+MPPSALD+L L+I YPMLF+L+N AG++T+
Sbjct: 13 FNTQYRCYSVSMLPGQERLDVEKGGKIIMPPSALDQLTRLNIVYPMLFKLTNPRAGQITH 72
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
CGV+EF+ADEG IYLPYWMM+N+LL EGD++ +++ASL ++ K QP ++DFLDISNPK
Sbjct: 73 CGVLEFVADEGKIYLPYWMMQNLLLDEGDLLNIESASLPVATFSKFQPQSEDFLDISNPK 132
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
AVLE LR+++CLT+GD + + YN K Y + V+ETKP AVSIIE D V+F PP+ + E
Sbjct: 133 AVLENALRNFACLTSGDVVAITYNEKIYELRVLETKPGNAVSIIECDMNVEFAPPVGYSE 192
Query: 187 PEKPSSSS 194
P K S S
Sbjct: 193 PTKVSKES 200
>gi|169766788|ref|XP_001817865.1| ubiquitin fusion degradation protein Ufd1 [Aspergillus oryzae
RIB40]
gi|238483559|ref|XP_002373018.1| ubiquitin fusion degradation protein Ufd1, putative [Aspergillus
flavus NRRL3357]
gi|83765720|dbj|BAE55863.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220701068|gb|EED57406.1| ubiquitin fusion degradation protein Ufd1, putative [Aspergillus
flavus NRRL3357]
gi|391870949|gb|EIT80118.1| ubiquitin fusion-degradation protein [Aspergillus oryzae 3.042]
Length = 369
Score = 230 bits (587), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 138/345 (40%), Positives = 196/345 (56%), Gaps = 29/345 (8%)
Query: 10 FERKYRCYPISFIDKPHLEN---GDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYP++ + P EN G K++MPPSALD+L LHI YPMLFEL N + R+T+
Sbjct: 30 FDEYYRCYPVAMMPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGARERLTH 89
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EFIA+EG IYLP+W+M+ +LL+ GD+V+VK+ L G ++KLQ + FLDIS+PK
Sbjct: 90 AGVLEFIAEEGKIYLPFWLMQTLLLEPGDLVQVKSTDLPPGQFIKLQAQSTSFLDISDPK 149
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIPPLD 183
AVLE R++SCLT GD YN++ Y + V+ETKP+T A+S++ETD EVDF PP+
Sbjct: 150 AVLENAFRNFSCLTKGDVFTFAYNDQVYEMAVLETKPATNSNAISVLETDLEVDFAPPVG 209
Query: 184 FKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLS-NRTPPEVKEEPPKKIAKFS 242
++EP++PS +S + R+ + P P + S++ PE + A S
Sbjct: 210 YEEPQRPSGTS-TPRSGVSATKLPAGGLLHPHGTMAQSINYAAIAPESTDAAAGAKAVSS 268
Query: 243 PFTGSGRCLNGKSSTQ---PTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFG 299
F G+ LN K ++ P S +P NPQ R+ +G +
Sbjct: 269 NFLIGGQRLNAKKGSKAPTPKASTPTPGATNPQH------------PPPVRRTNGPMPLR 316
Query: 300 SNANQSSNGTPKVLPKSSSGEPPQV--EEKPKFQAFTGKKYSLRG 342
NQ G + P E QV +EKP+FQ G +LRG
Sbjct: 317 LPPNQLFFGY-AIKPVQKRDESGQVVEDEKPRFQ---GSGQTLRG 357
>gi|449476983|ref|XP_002195503.2| PREDICTED: ubiquitin fusion degradation protein 1 homolog
[Taeniopygia guttata]
Length = 307
Score = 230 bits (587), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 117/262 (44%), Positives = 164/262 (62%), Gaps = 34/262 (12%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRC+ +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 79 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 139 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198
Query: 186 EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFT 245
EPE+ + + E D + S + F F+
Sbjct: 199 EPERSA------------QHEETADVEADHSGYVSDIG-----------------FRAFS 229
Query: 246 GSGRCLNG-KSSTQPTVSPSSP 266
GSG L+G K +P+ SP P
Sbjct: 230 GSGNRLDGKKKGVEPSPSPIKP 251
>gi|395518461|ref|XP_003763379.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog
[Sarcophilus harrisii]
Length = 302
Score = 230 bits (587), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 117/262 (44%), Positives = 163/262 (62%), Gaps = 34/262 (12%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRC+ +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 14 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 73
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 74 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 133
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 134 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 193
Query: 186 EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFT 245
EPE+ + + E D + L F F+
Sbjct: 194 EPER------------QTQHEETADVEADHSGYVGELG-----------------FRAFS 224
Query: 246 GSGRCLNG-KSSTQPTVSPSSP 266
GSG L+G K +P+ SP P
Sbjct: 225 GSGNRLDGKKKGIEPSPSPIKP 246
>gi|348585331|ref|XP_003478425.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Cavia
porcellus]
Length = 307
Score = 230 bits (587), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 117/262 (44%), Positives = 165/262 (62%), Gaps = 34/262 (12%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRC+ +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 79 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 139 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198
Query: 186 EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFT 245
EPE+ +V+ E + + + L F F+
Sbjct: 199 EPER------------QVQHEESTENEADHSGYAGELG-----------------FRAFS 229
Query: 246 GSGRCLNG-KSSTQPTVSPSSP 266
GSG L+G K +P+ SP P
Sbjct: 230 GSGNRLDGKKKGVEPSPSPIKP 251
>gi|449282004|gb|EMC88935.1| Ubiquitin fusion degradation protein 1 like protein, partial
[Columba livia]
Length = 307
Score = 230 bits (587), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 119/262 (45%), Positives = 168/262 (64%), Gaps = 34/262 (12%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRC+ +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 79 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 139 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198
Query: 186 EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFT 245
EPE+ S + +V+E+ S +S+ F F+
Sbjct: 199 EPER----SAQHEETTDVEED-----------HSGYVSD--------------IGFRAFS 229
Query: 246 GSGRCLNG-KSSTQPTVSPSSP 266
GSG L+G K +P+ SP P
Sbjct: 230 GSGNRLDGKKKGVEPSPSPIKP 251
>gi|145229383|ref|XP_001389000.1| ubiquitin fusion degradation protein Ufd1 [Aspergillus niger CBS
513.88]
gi|134055104|emb|CAK43744.1| unnamed protein product [Aspergillus niger]
Length = 366
Score = 230 bits (587), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 141/351 (40%), Positives = 197/351 (56%), Gaps = 33/351 (9%)
Query: 6 HDAA--FERKYRCYPISFIDKPHLEN---GDKIVMPPSALDRLAYLHIEYPMLFELSNTS 60
H AA F+ YRCYP++ + P EN G K++MPPSALD+L LHI YPMLFEL N +
Sbjct: 23 HGAARRFDEYYRCYPVAMMPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGA 82
Query: 61 AGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFL 120
R+T+ GV+EFIA+EG IYLP+W+M+ +LL+ GD+V+VK+ L G ++KLQ + FL
Sbjct: 83 RERLTHAGVLEFIAEEGKIYLPFWLMQTLLLEPGDLVQVKSTDLPPGQFIKLQAQSTSFL 142
Query: 121 DISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVD 177
DIS+PKAVLE R++SCLT GD YN++ Y + V+ETKPST A+S++ETD EVD
Sbjct: 143 DISDPKAVLENAFRNFSCLTKGDVFTFAYNDQVYEMAVLETKPSTDTNAISVLETDLEVD 202
Query: 178 FIPPLDFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLS-NRTPPEVKEEPPK 236
F PP+ ++EP++PS +S + + P P + +++ PE +
Sbjct: 203 FAPPVGYEEPQRPSGTSTPRSGV--SNKLPSGGLLHPHGTMAQAINYAAIAPESTDAAAG 260
Query: 237 KIAKFSPFTGSGRCLN---GKSSTQPTVSPSSPLIDNPQQ-NAANGINGSKSSSASSRQK 292
A S F G+ LN G ++ P S +P NPQ NG + R
Sbjct: 261 ARAVSSNFLSGGQRLNAKKGSKTSTPKPSTPTPGTTNPQHPPPVRKTNGPQ----PLRLG 316
Query: 293 SGKLVFGSNANQSSNGTPKVLPKSSSGEPPQV-EEKPKFQAFTGKKYSLRG 342
+L FG + P E QV E+KP+FQ G +LRG
Sbjct: 317 HNQLFFGY----------AIKPVKKRDESGQVLEDKPRFQ---GSGQTLRG 354
>gi|395753002|ref|XP_002830893.2| PREDICTED: ubiquitin fusion degradation protein 1 homolog isoform 1
[Pongo abelii]
Length = 323
Score = 230 bits (587), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 117/262 (44%), Positives = 165/262 (62%), Gaps = 34/262 (12%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRC+ +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 35 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 94
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 95 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 154
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 155 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 214
Query: 186 EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFT 245
EPE+ +V+ E + + + L F F+
Sbjct: 215 EPER------------QVQHEESTEGEADHSGYAGELG-----------------FRAFS 245
Query: 246 GSGRCLNG-KSSTQPTVSPSSP 266
GSG L+G K +P+ SP P
Sbjct: 246 GSGNRLDGKKKGVEPSPSPIKP 267
>gi|62901862|gb|AAY18882.1| ubiquitin fusion degradation 1-like [synthetic construct]
Length = 331
Score = 230 bits (587), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 117/262 (44%), Positives = 165/262 (62%), Gaps = 34/262 (12%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRC+ +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 43 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 102
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 103 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 162
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 163 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 222
Query: 186 EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFT 245
EPE+ +V+ E + + + L F F+
Sbjct: 223 EPER------------QVQHEESTEGEADHSGYAGELG-----------------FRAFS 253
Query: 246 GSGRCLNG-KSSTQPTVSPSSP 266
GSG L+G K +P+ SP P
Sbjct: 254 GSGNRLDGKKKGVEPSPSPIKP 275
>gi|70990288|ref|XP_749993.1| ubiquitin fusion degradation protein Ufd1 [Aspergillus fumigatus
Af293]
gi|66847625|gb|EAL87955.1| ubiquitin fusion degradation protein Ufd1, putative [Aspergillus
fumigatus Af293]
gi|159130474|gb|EDP55587.1| ubiquitin fusion degradation protein Ufd1, putative [Aspergillus
fumigatus A1163]
Length = 384
Score = 230 bits (587), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 143/346 (41%), Positives = 196/346 (56%), Gaps = 34/346 (9%)
Query: 10 FERKYRCYPISFIDKPHLEN---GDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYP++ + P EN G K++MPPSALD+L LHI YPMLFEL N + R+T+
Sbjct: 19 FDEYYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGAKERMTH 78
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EFIA+EG IYLP+W+M+ +LL+ GD+V+VK+ L G ++KLQ + FLDIS+PK
Sbjct: 79 AGVLEFIAEEGKIYLPFWLMQTLLLEPGDLVQVKSTDLPPGQFIKLQAQSTSFLDISDPK 138
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPS---TAVSIIETDCEVDFIPPLD 183
AVLE R++SCLT GD YN++ Y + V+ETKPS AVS++ETD EVDF PP+
Sbjct: 139 AVLENAFRNFSCLTKGDVFTFAYNDQVYEMAVLETKPSNNTNAVSVLETDLEVDFAPPVG 198
Query: 184 FKEPEKPSSSS--LSNRTLPEVKEEPPLDFKGPEKPSSSSLS-NRTPPEVKEEPPKKIAK 240
++E ++PS +S LS + + P P + +++ PE + A
Sbjct: 199 YEEIQRPSGTSTPLSGVS----GKLPSGGLLHPHGTMAQAINYAAIAPESTDAATGAKAV 254
Query: 241 FSPFTGSGRCLNG-KSSTQPTVSPSSPL--IDNPQQ-NAANGINGSKSSSASSRQKSGKL 296
S F G+ LN K S PT PS+P+ NPQ A NG + R +L
Sbjct: 255 SSNFLLGGQRLNAKKGSKAPTPKPSTPVPGATNPQHPPPARRTNGPQ----PLRLPPNQL 310
Query: 297 VFGSNANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
FG + P GE Q EKP+FQ G +LRG
Sbjct: 311 FFGY----------AIKPVKKRGEDGQAIEKPRFQ---GTGQTLRG 343
>gi|354480605|ref|XP_003502495.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog
[Cricetulus griseus]
Length = 307
Score = 230 bits (586), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 117/262 (44%), Positives = 165/262 (62%), Gaps = 34/262 (12%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRC+ S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 19 FSTQYRCFSASMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 79 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 139 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198
Query: 186 EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFT 245
EPE+P V+ E ++ + + + F F+
Sbjct: 199 EPERP------------VQHEESIEGEADHSGYTGEVG-----------------FRAFS 229
Query: 246 GSGRCLNG-KSSTQPTVSPSSP 266
GSG L+G K +P+ SP P
Sbjct: 230 GSGNRLDGKKKGVEPSPSPIKP 251
>gi|1654348|gb|AAD08719.1| ubiquitin fusion-degradation 1 like protein [Mus musculus]
Length = 307
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 115/262 (43%), Positives = 166/262 (63%), Gaps = 34/262 (12%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRC+ +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 79 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++C+TTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 139 KAVLENALRNFACMTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198
Query: 186 EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFT 245
EP++P V+ E ++ + + + F F+
Sbjct: 199 EPKRP------------VQHEESIEGEADHSGYAGEVG-----------------FRAFS 229
Query: 246 GSGRCLNG-KSSTQPTVSPSSP 266
GSG L+G K +P+ SP P
Sbjct: 230 GSGNRLDGKKKGVEPSPSPIKP 251
>gi|392877780|gb|AFM87722.1| ubiquitin fusion degradation 1-like protein [Callorhinchus milii]
Length = 302
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 140/335 (41%), Positives = 187/335 (55%), Gaps = 55/335 (16%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F +YRCY +S D+ +E G KI+MPPS+LD+L+ L I YPMLF+L+N RVT+
Sbjct: 14 FSTQYRCYSVSMFAGSDRSDVEKGGKIIMPPSSLDQLSRLSITYPMLFKLANKRTERVTH 73
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
CGV+EF+A+EG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K +P DFLDI+NPK
Sbjct: 74 CGVLEFVAEEGICYLPHWMMQNLLLEEGGLVQVESVNLMVATYSKFEPQAPDFLDITNPK 133
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
AVLE LR+++CLTTGD I + YN K Y + V+ETKP TAVSIIE D VDF PL KE
Sbjct: 134 AVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDTAVSIIECDMNVDFDAPLGCKE 193
Query: 187 PEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTG 246
PE+ S K E LD PE+ + + F FTG
Sbjct: 194 PERFS------------KHEDSLDLD-PEEAAFLAAD---------------LGFRAFTG 225
Query: 247 SGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNANQSS 306
SG L+GK + V PS I NP+ K + K GK+ F N S
Sbjct: 226 SGNRLDGK---KKGVEPSPAHI-NPED--------IKRGIPNYDFKIGKITFIRN----S 269
Query: 307 NGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
P+ L + +F AF+G+ SLR
Sbjct: 270 RPQPRRLDDEAG--------TSRFVAFSGEGQSLR 296
>gi|241982785|ref|NP_001030324.2| ubiquitin fusion degradation protein 1 homolog isoform B [Homo
sapiens]
gi|332262707|ref|XP_003280401.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog isoform 2
[Nomascus leucogenys]
gi|397485940|ref|XP_003814094.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog isoform 2
[Pan paniscus]
Length = 266
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 117/262 (44%), Positives = 165/262 (62%), Gaps = 34/262 (12%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRC+ +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 79 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 139 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198
Query: 186 EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFT 245
EPE+ +V+ E + + + L F F+
Sbjct: 199 EPER------------QVQHEESTEGEADHSGYAGELG-----------------FRAFS 229
Query: 246 GSGRCLNG-KSSTQPTVSPSSP 266
GSG L+G K +P+ SP P
Sbjct: 230 GSGNRLDGKKKGVEPSPSPIKP 251
>gi|403304246|ref|XP_003942717.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Saimiri
boliviensis boliviensis]
Length = 307
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 102/184 (55%), Positives = 141/184 (76%), Gaps = 4/184 (2%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRC+ +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 79 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 139 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198
Query: 186 EPEK 189
EPE+
Sbjct: 199 EPER 202
>gi|115496962|ref|NP_001068768.1| ubiquitin fusion degradation protein 1 homolog [Bos taurus]
gi|112362255|gb|AAI20442.1| Ubiquitin fusion degradation 1 like [Bos taurus]
gi|296478270|tpg|DAA20385.1| TPA: ubiquitin fusion degradation 1 like [Bos taurus]
Length = 231
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 103/186 (55%), Positives = 142/186 (76%), Gaps = 4/186 (2%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRC+ +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ RVT
Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRVT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 79 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 139 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198
Query: 186 EPEKPS 191
EPE+ +
Sbjct: 199 EPERQA 204
>gi|426393530|ref|XP_004063072.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog isoform 2
[Gorilla gorilla gorilla]
Length = 266
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 117/262 (44%), Positives = 165/262 (62%), Gaps = 34/262 (12%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRC+ +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 79 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 139 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198
Query: 186 EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFT 245
EPE+ +V+ E + + + L F F+
Sbjct: 199 EPER------------QVQHEESTESEADHSGYAGELG-----------------FRAFS 229
Query: 246 GSGRCLNG-KSSTQPTVSPSSP 266
GSG L+G K +P+ SP P
Sbjct: 230 GSGNRLDGKKKGVEPSPSPIKP 251
>gi|291414740|ref|XP_002723616.1| PREDICTED: ubiquitin fusion degradation 1-like [Oryctolagus
cuniculus]
Length = 307
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 102/184 (55%), Positives = 141/184 (76%), Gaps = 4/184 (2%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRC+ +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 79 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 139 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198
Query: 186 EPEK 189
EPE+
Sbjct: 199 EPER 202
>gi|296191344|ref|XP_002743586.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog
[Callithrix jacchus]
Length = 307
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 102/184 (55%), Positives = 141/184 (76%), Gaps = 4/184 (2%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRC+ +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 79 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 139 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198
Query: 186 EPEK 189
EPE+
Sbjct: 199 EPER 202
>gi|431904440|gb|ELK09825.1| Ubiquitin fusion degradation protein 1 like protein [Pteropus
alecto]
Length = 400
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 117/262 (44%), Positives = 165/262 (62%), Gaps = 34/262 (12%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRC+ +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 14 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 73
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 74 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 133
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 134 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 193
Query: 186 EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFT 245
EPE+ +V+ E + + + L F F+
Sbjct: 194 EPER------------QVQHEESTEGETDHSGYAGELG-----------------FRAFS 224
Query: 246 GSGRCLNG-KSSTQPTVSPSSP 266
GSG L+G K +P+ SP P
Sbjct: 225 GSGNRLDGKKKGVEPSPSPIKP 246
>gi|395858802|ref|XP_003801747.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Otolemur
garnettii]
Length = 307
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 102/184 (55%), Positives = 141/184 (76%), Gaps = 4/184 (2%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRC+ +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 79 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 139 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198
Query: 186 EPEK 189
EPE+
Sbjct: 199 EPER 202
>gi|194388222|dbj|BAG65495.1| unnamed protein product [Homo sapiens]
Length = 315
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 117/262 (44%), Positives = 165/262 (62%), Gaps = 34/262 (12%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRC+ +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 79 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 139 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198
Query: 186 EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFT 245
EPE+ +V+ E + + + L F F+
Sbjct: 199 EPER------------QVQHEESTEGEADHSGYAGELG-----------------FRAFS 229
Query: 246 GSGRCLNG-KSSTQPTVSPSSP 266
GSG L+G K +P+ SP P
Sbjct: 230 GSGNRLDGKKKGVEPSPSPIKP 251
>gi|221045384|dbj|BAH14369.1| unnamed protein product [Homo sapiens]
Length = 315
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 117/262 (44%), Positives = 164/262 (62%), Gaps = 34/262 (12%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRC+ +S + D+ +E G KI+MPPSALD+L L+I YPMLF+L+N ++ R+T
Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLGRLNITYPMLFKLTNKNSDRMT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 79 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 139 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198
Query: 186 EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFT 245
EPE+ +V+ E + + + L F F+
Sbjct: 199 EPER------------QVQHEESTEGEADHSGYAGELG-----------------FRAFS 229
Query: 246 GSGRCLNG-KSSTQPTVSPSSP 266
GSG L+G K +P+ SP P
Sbjct: 230 GSGNRLDGKKKGVEPSPSPIKP 251
>gi|334327462|ref|XP_001379183.2| PREDICTED: ubiquitin fusion degradation protein 1 homolog
[Monodelphis domestica]
Length = 307
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 102/184 (55%), Positives = 141/184 (76%), Gaps = 4/184 (2%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRC+ +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 79 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 139 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198
Query: 186 EPEK 189
EPE+
Sbjct: 199 EPER 202
>gi|323453038|gb|EGB08910.1| hypothetical protein AURANDRAFT_60034 [Aureococcus anophagefferens]
Length = 321
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 114/253 (45%), Positives = 159/253 (62%), Gaps = 15/253 (5%)
Query: 2 YENHHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSA 61
+ + F+ +Y C+ +F DKP+LE GDK+++P SA ++LA L IEYPMLFEL ++
Sbjct: 3 FGGRRNEVFDEQYHCFSGAFADKPNLEEGDKVLLPSSAFEQLARLQIEYPMLFEL-RSAK 61
Query: 62 GRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLD 121
GR T+CGV+EF A EG Y+P+WMM+N++L+EG ++ VKN SL K ++VK +P + DFLD
Sbjct: 62 GR-THCGVLEFTAPEGNCYVPFWMMQNLMLEEGGVLSVKNVSLPKATFVKFKPQSTDFLD 120
Query: 122 ISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPP 181
ISNP+AVLE R++SCLT GD I +PYN+K++Y+ V E KP A IIE DCEVDF P
Sbjct: 121 ISNPRAVLEKQFRTFSCLTVGDQICLPYNDKRFYLEVQEVKPREAACIIECDCEVDFDAP 180
Query: 182 LDFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKF 241
+ + EP+ S S R E P D P K S++ + + F
Sbjct: 181 VGYTEPDYASRS----RATSEASSMP--DLPAPLKALSAAKEAEAKAKAE-------GNF 227
Query: 242 SPFTGSGRCLNGK 254
F G+G L+GK
Sbjct: 228 KSFAGAGSRLDGK 240
>gi|327280860|ref|XP_003225169.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Anolis
carolinensis]
Length = 307
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 101/184 (54%), Positives = 141/184 (76%), Gaps = 4/184 (2%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRC+ +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V++++ +L +Y K QP + DFLDI+NP
Sbjct: 79 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQIESVNLQVATYSKFQPQSPDFLDITNP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 139 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198
Query: 186 EPEK 189
EPE+
Sbjct: 199 EPER 202
>gi|72008971|ref|XP_784491.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog
[Strongylocentrotus purpuratus]
gi|115760544|ref|XP_001178208.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog
[Strongylocentrotus purpuratus]
Length = 308
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 121/276 (43%), Positives = 163/276 (59%), Gaps = 37/276 (13%)
Query: 10 FERKYRCYPISFID---KPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ +YRC+ +S + + +E G KI+MPPSALD L+ LHIEYPMLF+L+N A R T
Sbjct: 14 FKTQYRCFSVSMLSGTYREDVERGGKIIMPPSALDTLSRLHIEYPMLFKLTNKKANRTTN 73
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDI--VEVKNASLAKGSYVKLQPHTKDFLDISN 124
CGV+EF+ADEG +YLPYWMM+N+LL EGD+ ++V+ L +Y K QP + DFLDISN
Sbjct: 74 CGVLEFVADEGKVYLPYWMMQNLLLDEGDLLNIQVEANGLPVATYSKFQPQSVDFLDISN 133
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDF 184
PKAVLE LR ++CLT GD + + YN+K Y + V+ETKPS AVSIIE D V+F PP+D+
Sbjct: 134 PKAVLENILRGFACLTKGDMVAIKYNDKIYELEVLETKPSDAVSIIECDMSVEFAPPVDY 193
Query: 185 KEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPF 244
EP+ +P KE + + S + + KF F
Sbjct: 194 VEPQ-----------MPRAKEHQHEEMQVDNTDYSQYID--------------VNKFRAF 228
Query: 245 TGSGRCLNGKSST---QPTVSPSSPLIDNPQQNAAN 277
G G L+GK +P + P D PQ+ N
Sbjct: 229 QGEGHRLDGKKKNVDYKPVIPPE----DIPQRGIPN 260
>gi|442754853|gb|JAA69586.1| Putative ubiquitin fusion-degradation protein [Ixodes ricinus]
Length = 303
Score = 228 bits (580), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 117/264 (44%), Positives = 163/264 (61%), Gaps = 30/264 (11%)
Query: 2 YENHHDAAFERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSN 58
+ H F +YR Y +S + ++ +E G KI+MPPSALD L L+I YPMLF+L+N
Sbjct: 7 FHEHLTRPFNTQYRSYSVSMLPGNERQDVERGGKIIMPPSALDHLTRLNIVYPMLFKLTN 66
Query: 59 TSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKD 118
+ R T+CGV+EF+ADEG +YLPYWM N+LL EGD+V+V++A+L ++ K QP + D
Sbjct: 67 KKSNRETHCGVLEFVADEGKVYLPYWMQRNLLLDEGDLVQVESATLPVATFSKFQPLSVD 126
Query: 119 FLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDF 178
FLDI+NPKAVLE LR+++CL+TGD+I + YNNK Y + V+ET+P AVSIIE D V+F
Sbjct: 127 FLDITNPKAVLENALRNFACLSTGDSIAIEYNNKIYELCVLETRPGKAVSIIECDMNVEF 186
Query: 179 IPPLDFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKI 238
PP+ +KEPE S+ K EK + LS +
Sbjct: 187 APPVGYKEPEHHSAP------------------KKQEKEAEMDLSAYDA---------EA 219
Query: 239 AKFSPFTGSGRCLNGKSSTQPTVS 262
A F F+G G L+GK+ +Q + S
Sbjct: 220 AGFVAFSGKGTRLDGKARSQESAS 243
>gi|26353928|dbj|BAC40594.1| unnamed protein product [Mus musculus]
Length = 307
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 116/262 (44%), Positives = 163/262 (62%), Gaps = 34/262 (12%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRC+ +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG V++ +L +Y K QP + DFLDI+NP
Sbjct: 79 HCGVLEFVADEGICYLPHWMMQNLLLEEGAWFRVESVNLQVATYSKFQPQSPDFLDITNP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 139 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198
Query: 186 EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFT 245
EPE+P V+ E ++ + + + F F+
Sbjct: 199 EPERP------------VQHEESIEGEADHSGYAGEVG-----------------FRAFS 229
Query: 246 GSGRCLNG-KSSTQPTVSPSSP 266
GSG L+G K +P+ SP P
Sbjct: 230 GSGNRLDGKKKGVEPSPSPIKP 251
>gi|229365840|gb|ACQ57900.1| Ubiquitin fusion degradation protein 1 homolog [Anoplopoma fimbria]
Length = 239
Score = 227 bits (579), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 102/184 (55%), Positives = 141/184 (76%), Gaps = 4/184 (2%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRCY +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 19 FSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 79 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLMVATYSKFQPQSPDFLDITNP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD + + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 139 KAVLENALRNFACLTTGDVVAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198
Query: 186 EPEK 189
EPE+
Sbjct: 199 EPER 202
>gi|241816807|ref|XP_002414671.1| ubiquitin fusion-degradation protein, putative [Ixodes scapularis]
gi|215508882|gb|EEC18336.1| ubiquitin fusion-degradation protein, putative [Ixodes scapularis]
Length = 253
Score = 227 bits (578), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 117/264 (44%), Positives = 163/264 (61%), Gaps = 30/264 (11%)
Query: 2 YENHHDAAFERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSN 58
+ H F +YR Y +S + ++ +E G KI+MPPSALD L L+I YPMLF+L+N
Sbjct: 7 FHEHLTRPFNTQYRSYSVSMLPGNERQDVERGGKIIMPPSALDHLTRLNIVYPMLFKLTN 66
Query: 59 TSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKD 118
+ R T+CGV+EF+ADEG +YLPYWM N+LL EGD+V+V++A+L ++ K QP + D
Sbjct: 67 KKSNRETHCGVLEFVADEGKVYLPYWMQRNLLLDEGDLVQVESATLPVATFSKFQPLSVD 126
Query: 119 FLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDF 178
FLDI+NPKAVLE LR+++CL+TGD+I + YNNK Y + V+ET+P AVSIIE D V+F
Sbjct: 127 FLDITNPKAVLENALRNFACLSTGDSIAIEYNNKIYELCVLETRPGKAVSIIECDMNVEF 186
Query: 179 IPPLDFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKI 238
PP+ +KEPE S+ K EK + LS +
Sbjct: 187 APPVGYKEPEHHSAP------------------KKQEKEAEMDLSAYD---------AEA 219
Query: 239 AKFSPFTGSGRCLNGKSSTQPTVS 262
A F F+G G L+GK+ +Q + S
Sbjct: 220 AGFVAFSGKGTRLDGKARSQESTS 243
>gi|193657081|ref|XP_001945441.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog
[Acyrthosiphon pisum]
Length = 301
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/263 (44%), Positives = 162/263 (61%), Gaps = 32/263 (12%)
Query: 4 NHHDAAFERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTS 60
NH F YRC+ +S + ++ +++G KI+MPPSALD L L+I YPMLF+LSN
Sbjct: 8 NHILQPFNMTYRCWSVSMLPGSEREAVDSGGKIIMPPSALDALTRLNINYPMLFKLSNKR 67
Query: 61 AGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFL 120
+ R T+CGV+EFIADEG IY+PYWMM+N+LL EGD+V+V++ SL ++ K QP +FL
Sbjct: 68 SNRQTHCGVLEFIADEGKIYIPYWMMKNLLLDEGDMVQVESVSLEVATFSKFQPLNSEFL 127
Query: 121 DISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIP 180
DI+NPKAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF P
Sbjct: 128 DITNPKAVLENCLRNFACLTTGDVIAIKYNQKNYEMCVLETKPGNAVSIIECDMNVDFAP 187
Query: 181 PLDFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAK 240
P+ ++EP K +KP++ + P ++ E ++
Sbjct: 188 PVGYQEP------------------------KHEKKPATEDMM-VDPADLMPE----LSG 218
Query: 241 FSPFTGSGRCLNGKSSTQPTVSP 263
F F GSG L+GK + T P
Sbjct: 219 FIAFKGSGNRLDGKKKKENTDDP 241
>gi|242013341|ref|XP_002427368.1| ubiquitin fusion degradaton protein, putative [Pediculus humanus
corporis]
gi|212511737|gb|EEB14630.1| ubiquitin fusion degradaton protein, putative [Pediculus humanus
corporis]
Length = 316
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/187 (55%), Positives = 138/187 (73%), Gaps = 3/187 (1%)
Query: 9 AFERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
+F +YRCY +S + D+ +E G KI+MPPSALD L L+I YPMLF+L+N RVT
Sbjct: 24 SFIVQYRCYSVSMLPGNDREDVERGGKIIMPPSALDALTKLNIIYPMLFKLTNKKMSRVT 83
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+ GV+EF+ADE +YLPYWMM N+LL+EGD++ ++N +L ++ + QP T+DFLDISNP
Sbjct: 84 HSGVLEFVADEDRVYLPYWMMRNLLLEEGDLIHIENVTLPVATFSRFQPQTEDFLDISNP 143
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LRS++CLTTGD I + YN+K Y + V+ETKP AV+IIE D VDF PP+ +K
Sbjct: 144 KAVLENCLRSFACLTTGDIIAIKYNSKVYELCVLETKPGEAVTIIECDMNVDFAPPVGYK 203
Query: 186 EPEKPSS 192
EP + S
Sbjct: 204 EPNQLES 210
>gi|290562181|gb|ADD38487.1| Ubiquitin fusion degradation protein 1 homolog [Lepeophtheirus
salmonis]
Length = 307
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 133/336 (39%), Positives = 190/336 (56%), Gaps = 52/336 (15%)
Query: 10 FERKYRCYPISFID---KPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F +Y CY S + + LE G KI++P SALD+L+ L+I YPMLF+L+N GR ++
Sbjct: 14 FNTQYACYSTSMLGGNVRSQLEWGGKIILPGSALDQLSRLNIVYPMLFKLTNRKTGRTSH 73
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EF+ADEG ++LPYWMMEN++L EGDI++V++ASL +Y K QPH+ DFL++SNPK
Sbjct: 74 AGVLEFVADEGKVHLPYWMMENLMLGEGDILQVESASLPVATYSKFQPHSLDFLELSNPK 133
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
AVLE+ LR+++CL+TGD I + YN++ Y ++V+ETKP AVSIIE D V+F P+ + E
Sbjct: 134 AVLESRLRNFACLSTGDVIAINYNDRIYQMSVLETKPDQAVSIIECDMNVEFAAPVGYVE 193
Query: 187 PEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTG 246
P+ SSS N + E E+ P+D +++ P PK F FTG
Sbjct: 194 PDAKSSS--KNASAQEEDEDEPMD-----------VTDLLP------APK---GFVAFTG 231
Query: 247 SGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNANQSS 306
G L+GK +++S S K + V G +
Sbjct: 232 DGVRLDGKK--------------------------KRTASTSGNSKEREYVRGIPDEDFA 265
Query: 307 NGTPKVLPKSSSGEPPQ-VEEKPKFQAFTGKKYSLR 341
GT K + S + VE F+AF G+ SLR
Sbjct: 266 FGTLKFIRNSKPKKATNGVEVTNDFKAFKGEGMSLR 301
>gi|296808985|ref|XP_002844831.1| ubiquitin fusion degradation protein 1 [Arthroderma otae CBS
113480]
gi|238844314|gb|EEQ33976.1| ubiquitin fusion degradation protein 1 [Arthroderma otae CBS
113480]
Length = 376
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 147/360 (40%), Positives = 200/360 (55%), Gaps = 41/360 (11%)
Query: 2 YENHHDAAFERKYRCYPISFIDKPHLEN---GDKIVMPPSALDRLAYLHIEYPMLFELSN 58
+ H F+ YRCYP++ + P EN G K++MPPSALD+L LHI YPMLFEL N
Sbjct: 3 HTTHASRRFDEYYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHN 62
Query: 59 TSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKD 118
+ R+T+ GV+EFIA+EG IYLP+W+M+ +LL+ GD+V++K+ L GS +KLQ +
Sbjct: 63 GAKQRMTHAGVLEFIAEEGKIYLPFWIMQTLLLEPGDLVQIKSTDLPPGSRIKLQAQSTS 122
Query: 119 FLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCE 175
FLDIS+PKAVLE R++SCLT GD YN++ Y + V+ETKP T A+S++ETD E
Sbjct: 123 FLDISDPKAVLENAFRNFSCLTKGDVFTFSYNDQIYEMAVLETKPETSQNALSVLETDLE 182
Query: 176 VDFIPPLDFKEPEKPS-----SSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEV 230
VDF PP+ ++EP++ S SSS+ + +LP L G S + + P
Sbjct: 183 VDFAPPVGYEEPKRVSGASTPSSSVVSGSLPSGGT---LHSHGTMAQSINYAA--IAPGS 237
Query: 231 KEEPPKKIAKFSPFTGSGRCLN----GKSSTQPTVSPSSPLIDN----PQQNAANGINGS 282
+ A S F GSG+ LN KSST + +P+S N P +NG
Sbjct: 238 NDAVRAANAASSNFHGSGQRLNMKKGSKSSTPKSTTPASGKSSNPPPAPPTRRSNGPQ-- 295
Query: 283 KSSSASSRQKSGKLVFGSNANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
R GKL FG TP V K SS + E +PK F G +LRG
Sbjct: 296 -----PLRLPPGKLFFGYAI------TP-VKKKESSDASAETEAQPK---FLGTGQTLRG 340
>gi|225710802|gb|ACO11247.1| Ubiquitin fusion degradation protein 1 homolog [Caligus
rogercresseyi]
Length = 312
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 106/207 (51%), Positives = 148/207 (71%), Gaps = 10/207 (4%)
Query: 10 FERKYRCYPISFID---KPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F +Y CY S + + LE G KI++P SALDRL+ L+I YPMLF+L+N ++GR ++
Sbjct: 14 FNTQYACYSTSMLGGNVRSQLEWGGKIILPSSALDRLSRLNIVYPMLFKLTNPASGRFSH 73
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EF+ADEG ++LPYWMMEN++L EGD++ V++ASL SY K QPH+ DFL++SNPK
Sbjct: 74 AGVLEFVADEGKVHLPYWMMENLMLGEGDLLRVESASLPVASYSKFQPHSSDFLELSNPK 133
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
AVLE+ LR+++CL++GD I + YN++ Y ++V+ETKP AVSIIE D V+F PPL + E
Sbjct: 134 AVLESRLRNFACLSSGDVIAINYNDRIYQMSVLETKPQAAVSIIECDMNVEFAPPLGYVE 193
Query: 187 PEKPSSSSLSNRTLPEVKEEPPLDFKG 213
P PS + E EE P+D G
Sbjct: 194 PTAPSKPT-------EDDEEEPMDIAG 213
>gi|121703245|ref|XP_001269887.1| ubiquitin fusion degradation protein Ufd1, putative [Aspergillus
clavatus NRRL 1]
gi|119398030|gb|EAW08461.1| ubiquitin fusion degradation protein Ufd1, putative [Aspergillus
clavatus NRRL 1]
Length = 397
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 143/358 (39%), Positives = 191/358 (53%), Gaps = 57/358 (15%)
Query: 10 FERKYRCYPISFIDKPHLEN---GDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYP++ + P EN G K++MPPSALD+L LHI YPMLFEL N S R+T+
Sbjct: 30 FDEYYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELVNGSKERMTH 89
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EFIA+EG IYLP+W+M+ + L+ GD+V+VK+ L G ++KLQ + FLDIS+PK
Sbjct: 90 AGVLEFIAEEGKIYLPFWLMQTLQLEPGDLVQVKSTDLPSGRFIKLQAQSTSFLDISDPK 149
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIPPLD 183
AVLE R++SCLT GD YN++ Y + V+ETKPS A+S++ETD EVDF PP+
Sbjct: 150 AVLENAFRNFSCLTKGDVFTFAYNDQVYEMAVLETKPSNPTDAISVLETDLEVDFAPPVG 209
Query: 184 FKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNR-----------TPPEVKE 232
++EP++PS +S PL P+ L + PE +
Sbjct: 210 YEEPKRPSGTST------------PLSGVSGRLPAGGLLHSHGTMAQSINYAAIAPESTD 257
Query: 233 EPPKKIAKFSPFTGSGRCLNG-KSSTQPTVSPSSPL--IDNPQQ----NAANGINGSKSS 285
A S F G+ LN K S PT PS+P+ NPQ ANG
Sbjct: 258 ATSGAKAVSSNFLVGGQRLNAKKGSKAPTPQPSTPVPGATNPQYPPPIRRANG------- 310
Query: 286 SASSRQKSGKLVFGSNANQSSNGTPKVLPKSSSGEPPQV-EEKPKFQAFTGKKYSLRG 342
R +L FG + P E QV EEKP+F G +LRG
Sbjct: 311 PQPLRLAPNQLFFGY----------AIKPVKKRDENDQVTEEKPRFH---GTGQTLRG 355
>gi|346466209|gb|AEO32949.1| hypothetical protein [Amblyomma maculatum]
Length = 329
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 132/344 (38%), Positives = 188/344 (54%), Gaps = 57/344 (16%)
Query: 2 YENHHDAAFERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSN 58
+ +H F +YR Y +S + ++ +E G KI+MPPSALD L L+I YPMLF+L+N
Sbjct: 33 FHDHLARPFNTQYRSYSVSMLPGNERQDVERGGKIIMPPSALDHLTRLNIVYPMLFKLTN 92
Query: 59 TSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKD 118
+ R T+CGV+EF+ADEG +YLPYWM N+LL EGDIV+V++A+L ++ K QP + D
Sbjct: 93 KKSNRETHCGVLEFVADEGKVYLPYWMQRNLLLDEGDIVQVESATLPVATFSKFQPLSVD 152
Query: 119 FLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDF 178
FLDI+NPKAVLE LR+++CL+T D I + YNNK Y + V+ETKP AVSIIE D V+F
Sbjct: 153 FLDITNPKAVLENALRNFACLSTNDVIAIEYNNKTYELCVLETKPGNAVSIIECDMNVEF 212
Query: 179 IPPLDFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKI 238
PP+ +K+PE ++ + ++E +D+ E S
Sbjct: 213 APPVGYKDPEPVNAQK-------KPQKEAEMDYSAYEAQPLS------------------ 247
Query: 239 AKFSPFTGSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGS-KSSSASSRQKSGKLV 297
F F+G+G L+GK +Q + A N + K G L
Sbjct: 248 --FVAFSGTGNRLDGKVRSQ-------------EAAAGNSVKTVPKRGIPDYDYTIGTLR 292
Query: 298 FGSNANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
F A P V E + + K +F+AF+GK +SLR
Sbjct: 293 FIRTAR------PTV-------EEAEDKNKEQFEAFSGKAHSLR 323
>gi|383861689|ref|XP_003706317.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog
[Megachile rotundata]
Length = 296
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 129/335 (38%), Positives = 185/335 (55%), Gaps = 59/335 (17%)
Query: 10 FERKYRCYPISFID---KPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F +Y+C+ +S + + +E G KI+MPPSAL++L L+I YPMLF+L+N RVT+
Sbjct: 14 FNTQYKCFSVSMLPGTYRQDVERGGKIIMPPSALEQLTRLNINYPMLFKLTNKKTNRVTH 73
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
CGV+EF+ADEG +YLPYWMM N+LLQE +++ V++ SL ++ + QP ++DFLDI+NPK
Sbjct: 74 CGVLEFVADEGKVYLPYWMMRNLLLQEEELINVESVSLPVATFSRFQPQSEDFLDITNPK 133
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
AVLE LRS++CLTTGD I + YN + Y + V+ETKP AVSIIE D V+F PP+ + E
Sbjct: 134 AVLENGLRSFACLTTGDIIAIKYNQRIYEMCVLETKPGPAVSIIECDMNVEFAPPVGYVE 193
Query: 187 PEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTG 246
PE+ K+E +D P ++ P A F PF G
Sbjct: 194 PEEEVK-----------KDENVMD----------------PADLMPAP----AGFVPFKG 222
Query: 247 SGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNANQSS 306
G L+GK + P N + G K G L+F N ++
Sbjct: 223 QGNRLDGKKRKDSAQA-------EPSANKPTYVRGIPDYD----YKIGTLIFLRNMKPTN 271
Query: 307 NGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
N +V++ +F+AFTG+ +SLR
Sbjct: 272 NK--------------EVKDPDEFKAFTGEGFSLR 292
>gi|256078324|ref|XP_002575446.1| ubiquitin fusion degradaton protein [Schistosoma mansoni]
Length = 376
Score = 224 bits (570), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 113/254 (44%), Positives = 159/254 (62%), Gaps = 28/254 (11%)
Query: 10 FERKYRCYPISFID---KPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F YRCYP+SF+ + +E G KI+MPPSALD L L+++YPMLF+L+N A R T+
Sbjct: 13 FTTSYRCYPVSFLADNFRSSVEKGGKIIMPPSALDVLTRLNVQYPMLFKLTNQQANRTTH 72
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
CGV+EF+ADEG IY+PYWM++N+ L+EG +V V NA+L S+ + QP + DFLDISNPK
Sbjct: 73 CGVLEFVADEGRIYVPYWMLKNLHLEEGGLVSVVNAALPVASFARFQPQSTDFLDISNPK 132
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
AVLE LR ++CLT GD I + YN + Y + V+ETKP AV+IIE D VDF PP+ ++
Sbjct: 133 AVLENALRDFACLTVGDIIAINYNERIYELKVLETKPKDAVTIIECDMSVDFAPPVGYQP 192
Query: 187 PEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTG 246
+ SSS S++ L +++E+ + P + F F+G
Sbjct: 193 TDSSSSSKQSDKDLHQIEEDIKI-------------------------PSVVQGFQAFSG 227
Query: 247 SGRCLNGKSSTQPT 260
+G L+GK+ T
Sbjct: 228 TGYRLDGKNKQDKT 241
>gi|315048571|ref|XP_003173660.1| ubiquitin fusion degradation protein 1 [Arthroderma gypseum CBS
118893]
gi|311341627|gb|EFR00830.1| ubiquitin fusion degradation protein 1 [Arthroderma gypseum CBS
118893]
Length = 393
Score = 223 bits (569), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 101/196 (51%), Positives = 140/196 (71%), Gaps = 6/196 (3%)
Query: 5 HHDAAFERKYRCYPISFIDKPHLEN---GDKIVMPPSALDRLAYLHIEYPMLFELSNTSA 61
H F+ YRCYP++ + P EN G K++MPPSALD+L LHI YPMLFEL N +
Sbjct: 24 HSSRRFDEYYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGAK 83
Query: 62 GRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLD 121
R+T+ GV+EFIA+EG IYLP+W+M+ +LL+ GD+V++K+ L GS +KLQ + FLD
Sbjct: 84 QRMTHAGVLEFIAEEGKIYLPFWVMQTLLLEPGDLVQIKSTDLPPGSKIKLQAQSTSFLD 143
Query: 122 ISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDF 178
IS+PKAVLE R++SCLT GD YN++ Y + V+ETKP T A+S++ETD EVDF
Sbjct: 144 ISDPKAVLENAFRNFSCLTKGDVFTFSYNDQIYEMAVLETKPETSQKAISVLETDLEVDF 203
Query: 179 IPPLDFKEPEKPSSSS 194
PP+ ++EP++ S +S
Sbjct: 204 APPVGYEEPKRLSGTS 219
>gi|353229817|emb|CCD75988.1| putative ubiquitin fusion degradaton protein [Schistosoma mansoni]
Length = 292
Score = 223 bits (569), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 113/254 (44%), Positives = 159/254 (62%), Gaps = 28/254 (11%)
Query: 10 FERKYRCYPISFID---KPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F YRCYP+SF+ + +E G KI+MPPSALD L L+++YPMLF+L+N A R T+
Sbjct: 13 FTTSYRCYPVSFLADNFRSSVEKGGKIIMPPSALDVLTRLNVQYPMLFKLTNQQANRTTH 72
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
CGV+EF+ADEG IY+PYWM++N+ L+EG +V V NA+L S+ + QP + DFLDISNPK
Sbjct: 73 CGVLEFVADEGRIYVPYWMLKNLHLEEGGLVSVVNAALPVASFARFQPQSTDFLDISNPK 132
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
AVLE LR ++CLT GD I + YN + Y + V+ETKP AV+IIE D VDF PP+ ++
Sbjct: 133 AVLENALRDFACLTVGDIIAINYNERIYELKVLETKPKDAVTIIECDMSVDFAPPVGYQP 192
Query: 187 PEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTG 246
+ SSS S++ L +++E+ + P + F F+G
Sbjct: 193 TDSSSSSKQSDKDLHQIEEDIKI-------------------------PSVVQGFQAFSG 227
Query: 247 SGRCLNGKSSTQPT 260
+G L+GK+ T
Sbjct: 228 TGYRLDGKNKQDKT 241
>gi|160331249|ref|XP_001712332.1| ufd [Hemiselmis andersenii]
gi|159765779|gb|ABW98007.1| ufd [Hemiselmis andersenii]
Length = 202
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 98/175 (56%), Positives = 132/175 (75%)
Query: 7 DAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
+ F+ + +CYP+SFI K LE GDKIV+PPS L+ L+ L +E+P++FEL + +GRVT+
Sbjct: 5 NLIFDFQLKCYPVSFIQKFELEKGDKIVLPPSILENLSTLDVEWPLMFELKSKFSGRVTH 64
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
CGVMEFIADEG Y+PYWMM+N+ + EG+ + + L KG++VK+QP T DFLDISN K
Sbjct: 65 CGVMEFIADEGCAYIPYWMMQNLAICEGEKISFRYKHLEKGTFVKIQPQTLDFLDISNTK 124
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPP 181
AVLE+ LR+++CLT DTI + YN Y++NVVE KP A+SI+ETD VDFI P
Sbjct: 125 AVLESKLRNFTCLTKSDTISIEYNEIIYWLNVVEVKPGNAISIVETDVNVDFIAP 179
>gi|212537845|ref|XP_002149078.1| ubiquitin fusion degradation protein Ufd1, putative [Talaromyces
marneffei ATCC 18224]
gi|210068820|gb|EEA22911.1| ubiquitin fusion degradation protein Ufd1, putative [Talaromyces
marneffei ATCC 18224]
Length = 380
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 116/265 (43%), Positives = 162/265 (61%), Gaps = 9/265 (3%)
Query: 10 FERKYRCYPISFIDKPHLEN---GDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYP++ + P EN G K++MPPSALD+L LHI YPMLFEL N + R+T+
Sbjct: 29 FDEYYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGAKERMTH 88
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EFIA+EG IYLP+W+M+ +LL+ GD+++VK+ L G ++KLQP + FLDIS+PK
Sbjct: 89 AGVLEFIAEEGKIYLPFWLMQTLLLEPGDLIQVKSTDLPPGRFIKLQPQSTSFLDISDPK 148
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPS---TAVSIIETDCEVDFIPPLD 183
AVLE R++SCLT GD YN++ Y I V++ KP A+S++ETD EVDF PP+
Sbjct: 149 AVLENAFRNFSCLTKGDAFTFAYNDQVYEIAVLDVKPDGDKKAISVLETDLEVDFAPPVG 208
Query: 184 FKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSP 243
++EP +PS S + G + + S PE + A+ S
Sbjct: 209 YEEPTRPSGVSTPAGGQAGAARGGVVHSHGSMAQAINYAS--IAPESDDVTKGAKAQSSN 266
Query: 244 FTGSGRCLNG-KSSTQPTVSPSSPL 267
F G LN KSS PT P++P+
Sbjct: 267 FLSGGHRLNAKKSSKTPTPQPNTPV 291
>gi|302505529|ref|XP_003014471.1| hypothetical protein ARB_07033 [Arthroderma benhamiae CBS 112371]
gi|291178292|gb|EFE34082.1| hypothetical protein ARB_07033 [Arthroderma benhamiae CBS 112371]
Length = 375
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 100/199 (50%), Positives = 140/199 (70%), Gaps = 6/199 (3%)
Query: 2 YENHHDAAFERKYRCYPISFIDKPHLEN---GDKIVMPPSALDRLAYLHIEYPMLFELSN 58
+ H F+ YRCYP++ + P EN G K++MPPSALD+L LHI YPMLFEL N
Sbjct: 3 HSTHSSRRFDEYYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHN 62
Query: 59 TSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKD 118
+ ++T+ GV+EFIA+EG IYLP+W+M+ +LL+ GD+V++K+ L GS +KLQ +
Sbjct: 63 GAKQQMTHAGVLEFIAEEGKIYLPFWIMQTLLLEPGDLVQIKSTDLPPGSKIKLQAQSTS 122
Query: 119 FLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCE 175
FLDIS+PKAVLE R++SCLT GD YN++ Y + V+ETKP T A+S++ETD E
Sbjct: 123 FLDISDPKAVLENAFRNFSCLTKGDIFTFSYNDQIYEMAVLETKPETSQNAISVLETDLE 182
Query: 176 VDFIPPLDFKEPEKPSSSS 194
VDF PP+ ++EP + S +S
Sbjct: 183 VDFAPPVGYEEPTRLSGTS 201
>gi|270008879|gb|EFA05327.1| hypothetical protein TcasGA2_TC015491 [Tribolium castaneum]
Length = 239
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 101/183 (55%), Positives = 138/183 (75%), Gaps = 3/183 (1%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F Y+C+ ++ + ++ +E G KI+MPPSAL++L L+I YPMLF+L+N RVT+
Sbjct: 14 FNMIYQCHSVAMLPGNERQDVERGGKIIMPPSALEQLTRLNINYPMLFKLTNKKTNRVTH 73
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
CGV+EF+ADEG +YLP WMM+NM+L+EGD+V +++ SL G++ K QP + DFLDI+NPK
Sbjct: 74 CGVLEFVADEGKVYLPLWMMQNMVLEEGDLVRIESVSLPVGTFSKFQPLSPDFLDITNPK 133
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
AVLE LRS++CLTTGD I V YN K Y + V+ETKP A+SIIE D V+F PP+ +KE
Sbjct: 134 AVLENCLRSFACLTTGDVIAVKYNQKIYELCVLETKPGNAISIIECDMNVEFAPPVGYKE 193
Query: 187 PEK 189
PEK
Sbjct: 194 PEK 196
>gi|417398548|gb|JAA46307.1| Putative ubiquitin fusion degradation protein 1 [Desmodus rotundus]
Length = 298
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 114/258 (44%), Positives = 160/258 (62%), Gaps = 35/258 (13%)
Query: 10 FERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGV 69
F +YRC+ +S + P + +MPPSALD+L+ L+I YPMLF+L+N ++ R+T+CGV
Sbjct: 19 FSTQYRCFSVSMLAGP-----NXXIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGV 73
Query: 70 MEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVL 129
+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NPKAVL
Sbjct: 74 LEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNPKAVL 133
Query: 130 ETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEK 189
E LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +KEPE+
Sbjct: 134 ENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPER 193
Query: 190 PSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTGSGR 249
+V+ E D + + L F F+GSG
Sbjct: 194 ------------QVQHEESTDGEADHSGYAGELG-----------------FRAFSGSGN 224
Query: 250 CLNG-KSSTQPTVSPSSP 266
L+G K +P+ SP P
Sbjct: 225 RLDGKKKGVEPSPSPIKP 242
>gi|255950618|ref|XP_002566076.1| Pc22g21810 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211593093|emb|CAP99469.1| Pc22g21810 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 394
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/265 (44%), Positives = 167/265 (63%), Gaps = 9/265 (3%)
Query: 10 FERKYRCYPISFIDKPHLEN---GDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYP++ + P EN G K++MPPSALD+L LHI YPMLFEL N + R+T+
Sbjct: 30 FDEYYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGARERMTH 89
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EFIA+EG IYLP+W+M+ +LL+ GD++++K+ L G ++KLQ + FLDIS+PK
Sbjct: 90 AGVLEFIAEEGKIYLPFWLMQTLLLEPGDLLQIKSTDLPPGQFIKLQAQSTSFLDISDPK 149
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPS---TAVSIIETDCEVDFIPPLD 183
AVLE R++SCL+ GD YN++ Y + V+ETKPS AVS++ETD EVDF PP+
Sbjct: 150 AVLENAFRNFSCLSKGDVFTFSYNDQVYEMAVLETKPSGTKDAVSVLETDLEVDFAPPVG 209
Query: 184 FKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSN-RTPPEVKEEPPKKIAKFS 242
F+EP++ S +S + K P P + S++ PE + A S
Sbjct: 210 FEEPQRTSGTSTPGSVVSGGK-LPAGGLLHPHGTMAQSINYPAIAPEATDAAAGARAVSS 268
Query: 243 PFTGSGRCLNG-KSSTQPTVSPSSP 266
F +G+ LN K S PT +PS+P
Sbjct: 269 NFLSAGQRLNAKKGSKAPTPNPSTP 293
>gi|326468676|gb|EGD92685.1| ubiquitin fusion degradation protein Ufd1 [Trichophyton tonsurans
CBS 112818]
gi|326485141|gb|EGE09151.1| ubiquitin fusion degradation protein 1 [Trichophyton equinum CBS
127.97]
Length = 384
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 100/199 (50%), Positives = 141/199 (70%), Gaps = 6/199 (3%)
Query: 2 YENHHDAAFERKYRCYPISFIDKPHLEN---GDKIVMPPSALDRLAYLHIEYPMLFELSN 58
+ H F+ YRCYP++ + P EN G K++MPPSALD+L LHI YPMLFEL N
Sbjct: 12 HPTHSSRRFDEYYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHN 71
Query: 59 TSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKD 118
+ ++T+ GV+EFIA+EG IYLP+W+M+ +LL+ GD+V++K+ L GS +KLQ +
Sbjct: 72 GAKQQMTHAGVLEFIAEEGKIYLPFWIMQTLLLEPGDLVQIKSTDLPPGSKIKLQAQSTS 131
Query: 119 FLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCE 175
FLDIS+PKAVLE R++SCLT GD YN++ Y + V+ETKP T A+S++ETD E
Sbjct: 132 FLDISDPKAVLENAFRNFSCLTKGDIFTFSYNDQIYEMAVLETKPETSQNAISVLETDLE 191
Query: 176 VDFIPPLDFKEPEKPSSSS 194
VDF PP+ ++EP++ S +S
Sbjct: 192 VDFAPPVGYEEPKRLSGTS 210
>gi|115396772|ref|XP_001214025.1| hypothetical protein ATEG_04847 [Aspergillus terreus NIH2624]
gi|114193594|gb|EAU35294.1| hypothetical protein ATEG_04847 [Aspergillus terreus NIH2624]
Length = 365
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 118/274 (43%), Positives = 166/274 (60%), Gaps = 12/274 (4%)
Query: 10 FERKYRCYPISFIDKPHLE---NGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYP++ + P E +G K++MPPSALD+L LHI YPMLFEL N + R+T+
Sbjct: 29 FDEYYRCYPVAMMPGPEREGVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGARERMTH 88
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EFIA+EG IYLP+W+M+ +LL+ GD+V+VK+ L G ++KLQ + FLDIS+PK
Sbjct: 89 AGVLEFIAEEGKIYLPFWLMQTLLLEPGDLVQVKSTDLPPGQFIKLQAQSTSFLDISDPK 148
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPS---TAVSIIETDCEVDFIPPLD 183
AVLE R++SCLT GD YN++ Y + V+ETKPS AVS++ETD EVDF PP+
Sbjct: 149 AVLENAFRNFSCLTKGDVFTFAYNDQVYEMAVLETKPSNNTNAVSVLETDLEVDFAPPVG 208
Query: 184 FKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLS-NRTPPEVKEEPPKKIAKFS 242
++EP++ S +S + + P P + S++ PE + A S
Sbjct: 209 YEEPQRQSGTSTPRSGV--SGKLPSGGLLHPHGTMAQSINYAAIAPESTDAATGARAVSS 266
Query: 243 PFTGSGRCLNGKSSTQ---PTVSPSSPLIDNPQQ 273
F G LN K ++ P S +P NPQ
Sbjct: 267 NFLSGGHRLNAKKGSKTPTPKASTPTPGTTNPQH 300
>gi|405972576|gb|EKC37338.1| Ubiquitin fusion degradation protein 1-like protein [Crassostrea
gigas]
Length = 692
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 131/350 (37%), Positives = 188/350 (53%), Gaps = 78/350 (22%)
Query: 9 AFERKYRCYPISFI-DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYC 67
+F + YRCY ++ + ++ +E G KI+MPPSALD+L LHI+YPMLF+L+N R T+C
Sbjct: 399 SFNQTYRCYSVTMLGERDDVERGGKIIMPPSALDQLTRLHIQYPMLFKLTNKKKNRETHC 458
Query: 68 GVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKA 127
GV+EF+ADEG IY+PYWMM N+LL EGD+++V+N SL ++ + QP + DFLDI+NPKA
Sbjct: 459 GVLEFVADEGRIYIPYWMMTNLLLTEGDLIQVENVSLKVATFARFQPQSVDFLDITNPKA 518
Query: 128 VLETTLRSYSCLTTGDTIMVPYNNKK---------YYINVVETKPSTAVSIIETDCEVDF 178
VLE LRS++CL+T D I + YN + Y + V+ETKP AVSIIE D VDF
Sbjct: 519 VLENMLRSFACLSTDDVISIKYNERAIITDVWFQNYDLLVLETKPDRAVSIIECDMNVDF 578
Query: 179 IPPLDFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKI 238
PP+ +KEPE + +G E+ +S+ + +
Sbjct: 579 APPVGYKEPEFQKKT------------------QGDEEMASAEVDHMDTD---------- 610
Query: 239 AKFSPFTGSGRCLNG-KSSTQP------TVSPSSPLIDNPQQNAANGINGSKSSSASSRQ 291
+ F F+G+G L+G K T+P +V+P + D
Sbjct: 611 SSFKVFSGAGNRLDGKKKGTEPAPVEGHSVAPKRGIPDYG-------------------Y 651
Query: 292 KSGKLVFGSNANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
K G + F A Q +N + EE+ F+AF+G SLR
Sbjct: 652 KKGTIKFIRTARQVNNESA--------------EEEKSFEAFSGAGQSLR 687
>gi|303319189|ref|XP_003069594.1| Ubiquitin fusion degradation protein UFD1 containing protein
[Coccidioides posadasii C735 delta SOWgp]
gi|240109280|gb|EER27449.1| Ubiquitin fusion degradation protein UFD1 containing protein
[Coccidioides posadasii C735 delta SOWgp]
Length = 351
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 137/359 (38%), Positives = 191/359 (53%), Gaps = 45/359 (12%)
Query: 4 NHHDAAFERKYRCYPISFIDKPHLE---NGDKIVMPPSALDRLAYLHIEYPMLFELSNTS 60
H F+ YRCYP++ + P E +G K+ MP SALD+L LHI YPMLFE+ N +
Sbjct: 14 GHAARRFDEYYRCYPVAMMPGPEREAANHGGKVFMPASALDKLTRLHITYPMLFEVHNGA 73
Query: 61 AGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFL 120
R+T+ GV+EFIA+EG IYLP+WMM+ +LL+ GD++++K+ L G +KLQ + FL
Sbjct: 74 KQRMTHAGVLEFIAEEGKIYLPFWMMQTLLLEPGDLLQIKSTDLPLGRLIKLQAQSTSFL 133
Query: 121 DISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETK---PSTAVSIIETDCEVD 177
DIS+PKAVLE R++SCLT GD YN++ Y + V+ETK P A+S++ETD EVD
Sbjct: 134 DISDPKAVLENAFRNFSCLTKGDVFTFSYNDQTYEMAVLETKPENPENAISVLETDLEVD 193
Query: 178 FIPPLDFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSN----RTPPEVKEE 233
F PPL ++EP++PS +S P L G P + + PE +
Sbjct: 194 FAPPLGYEEPKRPSGTS-----TPSSMTSAGLPLGGMLHPHGTMAQSINYAAIAPESTDA 248
Query: 234 PPKKIAKFSPFTGSGRCLNG-KSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQK 292
A S F G+ LN K S QPT S+P+ +G++ + A R+
Sbjct: 249 ARGAKAVSSNFLHGGQRLNSKKGSKQPTPKASTPV---------SGVSTNAQPPAPVRRT 299
Query: 293 S---------GKLVFGSNANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
+ GKL FG + P S E Q +E K +F G SLRG
Sbjct: 300 NGPQPLRLPPGKLFFGY----------AIKPVQKSNENGQ-KEGEKHTSFLGAGQSLRG 347
>gi|357631593|gb|EHJ79062.1| putative ubiquitin fusion degradaton protein [Danaus plexippus]
Length = 293
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 132/331 (39%), Positives = 185/331 (55%), Gaps = 49/331 (14%)
Query: 14 YRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVM 70
YRCY +S + ++ +E G KI+MPPSAL+ L L+IEYPM+F+L+N R+T+CGV+
Sbjct: 3 YRCYSVSMLPGNERQDVERGGKIIMPPSALELLTRLNIEYPMIFKLTNKKTKRITHCGVL 62
Query: 71 EFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLE 130
EF+ADEG +YLP+WMM N++L+EG +V++++ SL ++ K QP ++DFLDISN KAVLE
Sbjct: 63 EFVADEGKVYLPHWMMANLVLEEGTLVQIESVSLPVATFSKFQPLSEDFLDISNQKAVLE 122
Query: 131 TTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEKP 190
LR++SCLTTGD I + YN+K Y + V+ETKP AV IIE D V+F PP+ +KE +
Sbjct: 123 NCLRNFSCLTTGDVIAIKYNSKVYELCVLETKPGNAVIIIECDMNVEFAPPVGYKEEDHI 182
Query: 191 SSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTGSGRC 250
+ KG E S + P + EP + F F G G
Sbjct: 183 T--------------------KG-EGSSDMGRMDEDPASMMPEP----SGFVAFRGEGNR 217
Query: 251 LNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNANQSSNGTP 310
L+GK + S S P N +Q GI G L F N+
Sbjct: 218 LDGKKKKLTSESESEPQASNSRQPYVRGI-------PDYDYVIGTLRFIRNSR------- 263
Query: 311 KVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
P S+ E V+ +P FQAF G+ ++LR
Sbjct: 264 ---PPSAKEE---VQTEP-FQAFKGEGFTLR 287
>gi|119182456|ref|XP_001242357.1| hypothetical protein CIMG_06253 [Coccidioides immitis RS]
gi|320040993|gb|EFW22926.1| ubiquitin fusion degradation protein Ufd1 [Coccidioides posadasii
str. Silveira]
gi|392865250|gb|EAS31032.2| ubiquitin fusion degradation protein Ufd1 [Coccidioides immitis RS]
Length = 363
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 137/359 (38%), Positives = 191/359 (53%), Gaps = 45/359 (12%)
Query: 4 NHHDAAFERKYRCYPISFIDKPHLE---NGDKIVMPPSALDRLAYLHIEYPMLFELSNTS 60
H F+ YRCYP++ + P E +G K+ MP SALD+L LHI YPMLFE+ N +
Sbjct: 26 GHAARRFDEYYRCYPVAMMPGPEREAANHGGKVFMPASALDKLTRLHITYPMLFEVHNGA 85
Query: 61 AGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFL 120
R+T+ GV+EFIA+EG IYLP+WMM+ +LL+ GD++++K+ L G +KLQ + FL
Sbjct: 86 KQRMTHAGVLEFIAEEGKIYLPFWMMQTLLLEPGDLLQIKSTDLPLGRLIKLQAQSTSFL 145
Query: 121 DISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETK---PSTAVSIIETDCEVD 177
DIS+PKAVLE R++SCLT GD YN++ Y + V+ETK P A+S++ETD EVD
Sbjct: 146 DISDPKAVLENAFRNFSCLTKGDVFTFSYNDQTYEMAVLETKPENPENAISVLETDLEVD 205
Query: 178 FIPPLDFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSN----RTPPEVKEE 233
F PPL ++EP++PS +S P L G P + + PE +
Sbjct: 206 FAPPLGYEEPKRPSGTS-----TPSSMTSAGLPLGGMLHPHGTMAQSINYAAIAPESTDA 260
Query: 234 PPKKIAKFSPFTGSGRCLNG-KSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQK 292
A S F G+ LN K S QPT S+P+ +G++ + A R+
Sbjct: 261 ARGAKAVSSNFLHGGQRLNAKKGSKQPTPKASTPV---------SGVSTNAQPPAPVRRT 311
Query: 293 S---------GKLVFGSNANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
+ GKL FG + P S E Q +E K +F G SLRG
Sbjct: 312 NGPQPLRLPPGKLFFGY----------AIKPVQKSNENGQ-KEGEKHTSFLGAGQSLRG 359
>gi|242808131|ref|XP_002485099.1| ubiquitin fusion degradation protein Ufd1, putative [Talaromyces
stipitatus ATCC 10500]
gi|218715724|gb|EED15146.1| ubiquitin fusion degradation protein Ufd1, putative [Talaromyces
stipitatus ATCC 10500]
Length = 380
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 119/270 (44%), Positives = 165/270 (61%), Gaps = 19/270 (7%)
Query: 10 FERKYRCYPISFIDKPHLEN---GDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYP++ + P EN G K++MPPSALD+L LHI YPMLFEL N + R+T+
Sbjct: 29 FDEYYRCYPVAMLPGPVRENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGAKERMTH 88
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EFIA+EG IYLP+W+M+ +LL+ GD+++VK+ L G ++KLQP + FLDIS+PK
Sbjct: 89 AGVLEFIAEEGKIYLPFWLMQTLLLEPGDLIQVKSTDLPPGRFIKLQPQSTSFLDISDPK 148
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPS---TAVSIIETDCEVDFIPPLD 183
AVLE R++SCLT GD YN++ Y I V++ KP A+S++ETD EVDF PP+
Sbjct: 149 AVLENAFRNFSCLTKGDVFTFAYNDQIYEIAVLDVKPDGDKKAISVLETDLEVDFAPPVG 208
Query: 184 FKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSN-----RTPPEVKEEPPKKI 238
++EP + S +S P + P L G S S++ PE +
Sbjct: 209 YEEPTRTSGTS-----TPRSGQIPAL--HGGLVHSHGSMAQAINYAAIAPESSDVTKGAK 261
Query: 239 AKFSPFTGSGRCLNG-KSSTQPTVSPSSPL 267
A S F G LN KSS PT P++P+
Sbjct: 262 AVSSNFLSGGHRLNAKKSSKTPTPQPNTPV 291
>gi|327300849|ref|XP_003235117.1| ubiquitin fusion degradation protein Ufd1 [Trichophyton rubrum CBS
118892]
gi|326462469|gb|EGD87922.1| ubiquitin fusion degradation protein Ufd1 [Trichophyton rubrum CBS
118892]
Length = 393
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 140/347 (40%), Positives = 190/347 (54%), Gaps = 37/347 (10%)
Query: 2 YENHHDAAFERKYRCYPISFIDKPHLEN---GDKIVMPPSALDRLAYLHIEYPMLFELSN 58
+ H F+ YRCYP++ + P EN G K++MPPSALD+L LHI YPMLFEL N
Sbjct: 21 HPTHSSRRFDEYYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHN 80
Query: 59 TSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKD 118
+ ++T+ GV+EFIA+EG IYLP+W+M+ +LL+ GD+V++K+ L GS +KLQ +
Sbjct: 81 GAKQQMTHAGVLEFIAEEGKIYLPFWIMQTLLLEPGDLVQIKSTDLPPGSKIKLQAQSTS 140
Query: 119 FLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCE 175
FLDIS+PKAVLE R++SCLT GD YN++ Y + V+ETKP T A+S++ETD E
Sbjct: 141 FLDISDPKAVLENAFRNFSCLTKGDIFTFSYNDQIYEMAVLETKPETSQNAISVLETDLE 200
Query: 176 VDFIPPLDFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSN----RTPPEVK 231
VDF PP+ ++E S+ LS + P L G + + PE
Sbjct: 201 VDFAPPVGYEE-----SNRLSGTSTPASGAAGSLPAGGTLHSHGTMAQSINYAAIAPESN 255
Query: 232 EEPPKKIAKFSPFTGSGRCLN----GKSSTQPTVSPSSPLIDN----PQQNAANGINGSK 283
+ A S F GSG+ LN KSST + +P+S N P +NG
Sbjct: 256 DAARAANAASSNFHGSGQRLNMKKGSKSSTPKSATPASGKSSNPPPAPPTRRSNG----- 310
Query: 284 SSSASSRQKSGKLVFGSNANQSSNGTPKVLPKSSSGEPPQVEEKPKF 330
R GKL FG TP V K SS E P+ +PKF
Sbjct: 311 --PQPLRLPPGKLFFGYAV------TP-VNKKDSSDESPESGAQPKF 348
>gi|289740221|gb|ADD18858.1| ubiquitin fusion degradation protein [Glossina morsitans morsitans]
Length = 302
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 104/208 (50%), Positives = 143/208 (68%), Gaps = 4/208 (1%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ Y+C+ +S + ++ +ENG KI+MPPSALD L L++EYPMLF+L N GR ++
Sbjct: 18 FKASYKCFSVSMLPGNEREDVENGGKIIMPPSALDTLTRLNVEYPMLFKLINNKKGRHSH 77
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EF+ADEG YLPYWMM+N+LL+EGDI+ +++ SL + K QPH+ DFLDI+NPK
Sbjct: 78 AGVLEFVADEGKCYLPYWMMDNLLLEEGDILTIESVSLPVAKFSKFQPHSTDFLDITNPK 137
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
AVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D V+F P+ +KE
Sbjct: 138 AVLENALRNFACLTTGDVIAIKYNKKVYELCVLETKPGNAVSIIECDMNVEFEAPVGYKE 197
Query: 187 PEKPSSSSLSNRT-LPEVKEEPPLDFKG 213
+ ++ + V EE FKG
Sbjct: 198 TSEQVKENIRDEVPQDHVMEEVVETFKG 225
>gi|297746050|emb|CBI16106.3| unnamed protein product [Vitis vinifera]
Length = 289
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 130/293 (44%), Positives = 173/293 (59%), Gaps = 65/293 (22%)
Query: 10 FERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGV 69
F++ Y C P S ++KP LE GDKI+MP SALD L L I +PMLF+L N ++GRVT+CGV
Sbjct: 50 FKQIYHCLPASSLNKPQLEMGDKIIMPASALDLLTNLEISFPMLFKLKNPASGRVTHCGV 109
Query: 70 MEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVL 129
+EF A EG ++LP WMMEN+LL+EGDI K
Sbjct: 110 LEFTAKEGTMHLPSWMMENLLLEEGDISTTK----------------------------- 140
Query: 130 ETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEK 189
LRS+SCLTTGDTI++ Y+NKK+YI++V+TKPS AV II+TDCEVDF
Sbjct: 141 ---LRSFSCLTTGDTIVIDYSNKKFYIDIVDTKPSAAVCIIDTDCEVDF----------- 186
Query: 190 PSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKE-EPPKKIAKFSPFTGSG 248
PPLD++ ++P S+LS++T E +E + K+ KF PFTGS
Sbjct: 187 ----------------APPLDYEEADEPKPSNLSSKT--ESRESKLATKLIKFKPFTGSA 228
Query: 249 RCLNGK-SSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGS 300
R L+GK S V SSP+ P+ +G NG SSS+++ Q+S K+VFGS
Sbjct: 229 RRLDGKPISESVAVVSSSPMPQQPEDT--DGTNGPTSSSSTTFQRSRKVVFGS 279
>gi|196010571|ref|XP_002115150.1| hypothetical protein TRIADDRAFT_28674 [Trichoplax adhaerens]
gi|190582533|gb|EDV22606.1| hypothetical protein TRIADDRAFT_28674, partial [Trichoplax
adhaerens]
Length = 292
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 97/177 (54%), Positives = 134/177 (75%), Gaps = 2/177 (1%)
Query: 15 RCYPISFI--DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEF 72
RCY +S + + L+NG KI++PPSALD L L+I YPMLF+++N + R T+CGV+EF
Sbjct: 6 RCYSVSMMPDSREELDNGGKIILPPSALDILTRLNIVYPMLFKITNKQSDRSTHCGVLEF 65
Query: 73 IADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETT 132
+ADEG +Y+PYWMM N+L+ EGD+V +++ASL +Y K QP + DFLDI+N KAVLE
Sbjct: 66 VADEGKMYIPYWMMRNLLVSEGDLVRIESASLPVATYSKFQPFSVDFLDITNHKAVLENA 125
Query: 133 LRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEK 189
LRS++CLT GD + + YN+K Y + V+ETKP AVSIIE D V+F PP+D+KEP++
Sbjct: 126 LRSFACLTKGDVVAIKYNDKVYELLVMETKPGQAVSIIECDMSVEFAPPIDYKEPQR 182
>gi|260803421|ref|XP_002596588.1| hypothetical protein BRAFLDRAFT_122069 [Branchiostoma floridae]
gi|229281847|gb|EEN52600.1| hypothetical protein BRAFLDRAFT_122069 [Branchiostoma floridae]
Length = 241
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 97/181 (53%), Positives = 135/181 (74%), Gaps = 3/181 (1%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F +YRCY +S + ++ +E G KI+MPPSALD+L L+I YPMLF+L+N A R T+
Sbjct: 15 FNTQYRCYSVSMLPGNERSDVERGGKIIMPPSALDQLTRLNIVYPMLFKLTNKRANRETH 74
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EF+ADEG +YLPYWMM N+L++EG I++V+NASL ++ K QP ++DFLDI+NPK
Sbjct: 75 SGVLEFVADEGKVYLPYWMMRNLLIEEGGILQVENASLPVATFSKFQPQSEDFLDITNPK 134
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
AVLE LR+++CLT GD + + YN K Y ++V+E KP AVSIIE D V+F P+ ++E
Sbjct: 135 AVLENALRNFACLTKGDVVAITYNEKVYELHVMEVKPGQAVSIIECDMNVEFAAPVGYQE 194
Query: 187 P 187
P
Sbjct: 195 P 195
>gi|295658985|ref|XP_002790052.1| ubiquitin fusion degradation protein [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226282135|gb|EEH37701.1| ubiquitin fusion degradation protein [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 398
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 98/199 (49%), Positives = 137/199 (68%), Gaps = 6/199 (3%)
Query: 2 YENHHDAAFERKYRCYPISFIDKPHLEN---GDKIVMPPSALDRLAYLHIEYPMLFELSN 58
+ H F+ YRCYP++ + P EN G K++MPPSALD+L LHI YPMLFE++N
Sbjct: 12 HPGHSPRRFDEFYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFEINN 71
Query: 59 TSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKD 118
R+T+ GV+EFIA+EG IYLP+W+M+ + L+ GD V+VK+ L G Y+KLQ +
Sbjct: 72 GQRDRMTHAGVLEFIAEEGKIYLPFWLMQTLFLEPGDFVQVKSTDLPPGRYIKLQAQSTS 131
Query: 119 FLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPS---TAVSIIETDCE 175
FLDIS+PKAVLE R++SCLT GD YN++ Y + V+ETKP A+S++ETD E
Sbjct: 132 FLDISDPKAVLENAFRNFSCLTKGDIFTFSYNDQIYEMAVLETKPQHSKNAISVLETDLE 191
Query: 176 VDFIPPLDFKEPEKPSSSS 194
VDF P+ ++EP++ S +S
Sbjct: 192 VDFATPVGYEEPKRSSGAS 210
>gi|425771292|gb|EKV09739.1| Ubiquitin fusion degradation protein Ufd1, putative [Penicillium
digitatum Pd1]
gi|425776823|gb|EKV15024.1| Ubiquitin fusion degradation protein Ufd1, putative [Penicillium
digitatum PHI26]
Length = 395
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 95/191 (49%), Positives = 138/191 (72%), Gaps = 6/191 (3%)
Query: 10 FERKYRCYPISFIDKPHLE---NGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYP++ + P E +G K++MPPSALD+L LHI YPMLFEL N + R+T+
Sbjct: 30 FDEYYRCYPVAMLPGPERESVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGAKERMTH 89
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EFIA+EG IYLP+W+M+ +LL+ GD++++K+ L G ++K+Q + FLDIS+PK
Sbjct: 90 AGVLEFIAEEGKIYLPFWLMQTLLLEPGDLLQIKSTDLPPGQFIKIQAQSTSFLDISDPK 149
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPS---TAVSIIETDCEVDFIPPLD 183
AVLE R++SCL+ GD YN++ Y + V+ETKPS A+S++ETD EVDF P+
Sbjct: 150 AVLENAFRNFSCLSKGDVFTFSYNDQVYEMAVLETKPSGTKNAISVLETDLEVDFAAPVG 209
Query: 184 FKEPEKPSSSS 194
F+EP++ S +S
Sbjct: 210 FEEPQRASGTS 220
>gi|345486244|ref|XP_001599477.2| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Nasonia
vitripennis]
Length = 297
Score = 217 bits (552), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 101/187 (54%), Positives = 136/187 (72%), Gaps = 3/187 (1%)
Query: 9 AFERKYRCYPISF---IDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
+F ++CY S ID+ +E G KI++PPSALD L L+ YPMLF+L+N R T
Sbjct: 15 SFNTHFKCYSASMLPGIDRQDIEQGGKIILPPSALDILTRLNTVYPMLFKLTNRITRRET 74
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
YCGV+EFIA EGL YLP WMM N+LL+EGDI+ V + SL +Y + QP ++DFL+I+NP
Sbjct: 75 YCGVLEFIAGEGLAYLPCWMMRNLLLKEGDILNVMSVSLPVATYARFQPQSEDFLEITNP 134
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLT GD I + YN++ Y ++V+ETKP+ AV+IIE D V+F PP+ +K
Sbjct: 135 KAVLENGLRNFACLTAGDIIAISYNSRIYEMSVLETKPNPAVTIIECDMNVEFAPPVGYK 194
Query: 186 EPEKPSS 192
EPEKP S
Sbjct: 195 EPEKPVS 201
>gi|223997792|ref|XP_002288569.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975677|gb|EED94005.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 178
Score = 217 bits (552), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 94/178 (52%), Positives = 128/178 (71%)
Query: 10 FERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGV 69
FE +Y CY ++ DK LE GDKI++PPSA D LA L ++YPMLF+L + G +T+CGV
Sbjct: 1 FEEQYHCYSAAYADKSQLEQGDKILLPPSAFDILARLQVDYPMLFQLQSGDKGTLTHCGV 60
Query: 70 MEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVL 129
+EF A+EG +P+WMM+N+L++EG ++ V N SL K ++VK Q DFL+ISNP+AVL
Sbjct: 61 LEFTAEEGSCVIPFWMMQNLLIEEGAVLTVTNVSLPKANFVKFQAQHVDFLEISNPRAVL 120
Query: 130 ETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEP 187
E LR++SC+T GD I VPYN+K Y+ + E +P A IIETDC VDF P+ +KEP
Sbjct: 121 EHALRNFSCITKGDVICVPYNSKNYHFEIKEVRPQDAACIIETDCNVDFDAPVGYKEP 178
>gi|194868901|ref|XP_001972352.1| GG13934 [Drosophila erecta]
gi|190654135|gb|EDV51378.1| GG13934 [Drosophila erecta]
Length = 314
Score = 216 bits (551), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 96/189 (50%), Positives = 137/189 (72%), Gaps = 3/189 (1%)
Query: 9 AFERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
+F+ Y+C+ +S + ++ +E G KI+MPPSALDRL L++EYPMLF+L+N R +
Sbjct: 16 SFQASYKCFSVSMLPGNERSDVEKGGKIIMPPSALDRLTRLNVEYPMLFKLTNGKKSRSS 75
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+ GV+EF+ADEG YLPYWMM+N+LL EGDI+++++ SL ++ K QPH+ DFLDI+NP
Sbjct: 76 HAGVLEFVADEGKCYLPYWMMDNLLLGEGDILKIESVSLPVATFSKFQPHSTDFLDITNP 135
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLT GD I + YN K Y + V+ETKP AVSIIE D V+F P+ +K
Sbjct: 136 KAVLENALRNFACLTKGDVIAIKYNKKVYELCVLETKPGNAVSIIECDMNVEFEAPVGYK 195
Query: 186 EPEKPSSSS 194
+ + +S
Sbjct: 196 DHSETQASG 204
>gi|183448198|pdb|2YUJ|A Chain A, Solution Structure Of Human Ubiquitin Fusion Degradation
Protein 1 Homolog Ufd1
Length = 190
Score = 216 bits (551), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 96/173 (55%), Positives = 133/173 (76%), Gaps = 4/173 (2%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRC+ +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 16 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 75
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 76 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 135
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDF 178
KAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF
Sbjct: 136 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDF 188
>gi|327354928|gb|EGE83785.1| ubiquitin fusion degradation protein Ufd1 [Ajellomyces dermatitidis
ATCC 18188]
Length = 408
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 97/199 (48%), Positives = 137/199 (68%), Gaps = 6/199 (3%)
Query: 2 YENHHDAAFERKYRCYPISFIDKPHLEN---GDKIVMPPSALDRLAYLHIEYPMLFELSN 58
+ H F+ YRCYP++ + P EN G K++MPPSALD+L LHI YPMLFEL N
Sbjct: 24 HPGHTSRRFDEFYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHN 83
Query: 59 TSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKD 118
R T+ GV+EFIA+EG IYLP+W+M+ +LL+ GD++++K+ L G Y+KLQ +
Sbjct: 84 RVKDRTTHAGVLEFIAEEGKIYLPFWIMQTLLLEPGDLLQIKSTDLPPGQYIKLQAQSTS 143
Query: 119 FLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPS---TAVSIIETDCE 175
FLDIS+PKAVLE R++SCL+ GD YN + Y + V+ETKP +A+S++ETD E
Sbjct: 144 FLDISDPKAVLENAFRNFSCLSKGDIFTFSYNEQIYEMAVLETKPQHSKSAISVLETDLE 203
Query: 176 VDFIPPLDFKEPEKPSSSS 194
VDF P+ ++EP++ S +S
Sbjct: 204 VDFATPIGYEEPKRVSGTS 222
>gi|440899628|gb|ELR50903.1| Ubiquitin fusion degradation protein 1-like protein, partial [Bos
grunniens mutus]
Length = 330
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 103/208 (49%), Positives = 141/208 (67%), Gaps = 28/208 (13%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRC+ +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ RVT
Sbjct: 18 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRVT 77
Query: 66 YCGVMEFIADEGLIYLPYW------------------------MMENMLLQEGDIVEVKN 101
+CGV+EF+ADEG+ YLP+W MM+N+LL+EG +V+V++
Sbjct: 78 HCGVLEFVADEGICYLPHWVFPRFPPTTRPWPRPYCVPSAPFQMMQNLLLEEGGLVQVES 137
Query: 102 ASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVET 161
+L +Y K QP + DFLDI+NPKAVLE LR+++CLTTGD I + YN K Y + V+ET
Sbjct: 138 VNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMET 197
Query: 162 KPSTAVSIIETDCEVDFIPPLDFKEPEK 189
KP AVSIIE D VDF PL +KEPE+
Sbjct: 198 KPDKAVSIIECDMNVDFDAPLGYKEPER 225
>gi|225718586|gb|ACO15139.1| Ubiquitin fusion degradation protein 1 homolog [Caligus clemensi]
Length = 312
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 97/182 (53%), Positives = 139/182 (76%), Gaps = 3/182 (1%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F +Y CY S + ++ LE G KI++P SALD+L+ L+I YPMLF+L+N GRV++
Sbjct: 14 FNTQYACYSTSMLGGNERSQLEWGGKIILPGSALDQLSRLNIVYPMLFKLTNPQTGRVSH 73
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EF+ADEG ++LPYWMMEN+ L EGD+++V++ASL +Y K QPH+ DFLD+SNPK
Sbjct: 74 AGVLEFVADEGKVHLPYWMMENLNLGEGDLLQVESASLPVATYSKFQPHSSDFLDLSNPK 133
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
AVL + LR+++CL++GD I + YN++ Y ++V+ETKP TAVSIIE D V+F PP+ + E
Sbjct: 134 AVLVSRLRNFACLSSGDVIAINYNDRIYQMSVLETKPQTAVSIIECDMNVEFAPPVGYVE 193
Query: 187 PE 188
P+
Sbjct: 194 PD 195
>gi|195379542|ref|XP_002048537.1| GJ11302 [Drosophila virilis]
gi|194155695|gb|EDW70879.1| GJ11302 [Drosophila virilis]
Length = 314
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 97/191 (50%), Positives = 139/191 (72%), Gaps = 5/191 (2%)
Query: 9 AFERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
+F+ Y+C+ +S + ++ +E G KI+MPPSALD L L++EYPMLF+L+N R +
Sbjct: 17 SFQATYKCFSVSMLPGNERSDVEKGGKIIMPPSALDTLTRLNVEYPMLFKLTNKKKSRSS 76
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+ GV+EF+ADEG YLPYWMM+N+LL+EGDI+ +++ SL ++ K QPH+ DFLDI+NP
Sbjct: 77 HAGVLEFVADEGKCYLPYWMMDNLLLEEGDILSIESVSLQVATFSKFQPHSTDFLDITNP 136
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLT GD I + YN K Y + V+ETKP AVSIIE D V+F P+ +K
Sbjct: 137 KAVLENALRNFACLTKGDVIAIKYNKKVYELCVLETKPGNAVSIIECDMNVEFEAPVGYK 196
Query: 186 E--PEKPSSSS 194
E ++P++ S
Sbjct: 197 EHGEQQPAAQS 207
>gi|55742511|ref|NP_001006806.1| ubiquitin fusion degradation protein 1 homolog [Xenopus (Silurana)
tropicalis]
gi|50370156|gb|AAH76680.1| ubiquitin fusion degradation 1 like [Xenopus (Silurana) tropicalis]
Length = 307
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 113/249 (45%), Positives = 160/249 (64%), Gaps = 33/249 (13%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRCY +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 19 FSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +++V++ +L +Y K QP + DFLDI+NP
Sbjct: 79 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLLQVESVNLQVATYSKFQPQSPDFLDITNP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 139 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198
Query: 186 EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFT 245
EPE+ ++E P + + ++ L F F+
Sbjct: 199 EPER------------HTQQEEPTEIEPDHSEYAADLG-----------------FRAFS 229
Query: 246 GSGRCLNGK 254
GSG L+GK
Sbjct: 230 GSGNRLDGK 238
>gi|147900383|ref|NP_001083638.1| ubiquitin fusion degradation protein 1 homolog [Xenopus laevis]
gi|38540890|gb|AAH61930.1| MGC68571 protein [Xenopus laevis]
Length = 307
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 117/262 (44%), Positives = 164/262 (62%), Gaps = 34/262 (12%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRCY +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 19 FSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +++V++ +L +Y K QP + DFLDI+NP
Sbjct: 79 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLLQVESVNLQVATYSKFQPQSPDFLDITNP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD + + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 139 KAVLENALRNFACLTTGDVVAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198
Query: 186 EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFT 245
EPE+ ++E P + + + L F FT
Sbjct: 199 EPER------------HTQQEEPTENEPDHSEYAVDLG-----------------FRAFT 229
Query: 246 GSGRCLNG-KSSTQPTVSPSSP 266
GSG L+G K P+ SP P
Sbjct: 230 GSGNRLDGKKKGIDPSPSPLKP 251
>gi|402883575|ref|XP_003905288.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Papio
anubis]
Length = 381
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 113/266 (42%), Positives = 164/266 (61%), Gaps = 38/266 (14%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLA-YLHIE---YPMLFELSNTSA 61
F +YRC+ +S + D+ +E G KI+MPPSALD+L+ YL + YP++ +++N ++
Sbjct: 89 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSKYLLSDLRTYPLIHKMTNKNS 148
Query: 62 GRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLD 121
R+T+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLD
Sbjct: 149 DRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLD 208
Query: 122 ISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPP 181
I+NPKAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF P
Sbjct: 209 ITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAP 268
Query: 182 LDFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKF 241
L +KEPE+ +V+ E + + + L F
Sbjct: 269 LGYKEPER------------QVQHEESTEGEADHSGYAGELG-----------------F 299
Query: 242 SPFTGSGRCLNG-KSSTQPTVSPSSP 266
F+GSG L+G K +P+ SP P
Sbjct: 300 RAFSGSGNRLDGKKKGVEPSPSPIKP 325
>gi|195441598|ref|XP_002068592.1| GK20554 [Drosophila willistoni]
gi|194164677|gb|EDW79578.1| GK20554 [Drosophila willistoni]
Length = 325
Score = 214 bits (544), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 94/188 (50%), Positives = 135/188 (71%), Gaps = 3/188 (1%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ Y+C+ +S + ++ +E G KI+MPPSALD L L +EYPMLF+L+NT R ++
Sbjct: 17 FKATYKCFSVSMLPGNERTDVEKGGKIIMPPSALDTLTRLSVEYPMLFKLNNTKKSRASH 76
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EF+ADEG YLPYWMM+N+LL+EGDI+++++ SL ++ K QPH+ DFLDI+NPK
Sbjct: 77 AGVLEFVADEGKCYLPYWMMDNLLLEEGDILDIESVSLPVATFSKFQPHSTDFLDITNPK 136
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
AVLE LR+++CLT GD I + YN K Y + V++T+P AVSIIE D V+F P+ + E
Sbjct: 137 AVLENALRNFACLTKGDVIAIKYNKKVYELCVLDTRPGNAVSIIECDMNVEFEAPVGYNE 196
Query: 187 PEKPSSSS 194
+ +S
Sbjct: 197 QHAATGTS 204
>gi|195128671|ref|XP_002008785.1| GI11622 [Drosophila mojavensis]
gi|193920394|gb|EDW19261.1| GI11622 [Drosophila mojavensis]
Length = 314
Score = 214 bits (544), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 96/191 (50%), Positives = 139/191 (72%), Gaps = 5/191 (2%)
Query: 9 AFERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
+F+ Y+C+ +S + ++ +E G KI+MPPSALD L L++EYPMLF+L+N R +
Sbjct: 17 SFQVTYKCFSVSMLPGNERSDVEKGGKIIMPPSALDSLTRLNVEYPMLFKLTNKKKSRSS 76
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+ GV+EF+ADEG YLPYWMM+N+LL+EGDI+ +++ SL ++ K QPH+ DFLDI+NP
Sbjct: 77 HAGVLEFVADEGKCYLPYWMMDNLLLEEGDILNIESVSLQVATFSKFQPHSTDFLDITNP 136
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLT GD I + YN K Y + V+ET+P AVSIIE D V+F P+ +K
Sbjct: 137 KAVLENALRNFACLTKGDVIAIKYNKKVYELCVLETRPGDAVSIIECDMNVEFEAPVGYK 196
Query: 186 E--PEKPSSSS 194
E ++P++ S
Sbjct: 197 EHSEQQPATQS 207
>gi|345560367|gb|EGX43492.1| hypothetical protein AOL_s00215g228 [Arthrobotrys oligospora ATCC
24927]
Length = 403
Score = 214 bits (544), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 99/197 (50%), Positives = 139/197 (70%), Gaps = 6/197 (3%)
Query: 10 FERKYRCYPISFI--DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYC 67
F+ YRCYP++ + + +L G K++MPPSALD+L LHI YPMLFEL N G++T+C
Sbjct: 24 FDEYYRCYPVAMMPTGRENLNYGGKVIMPPSALDKLTRLHISYPMLFELHN-GKGKLTHC 82
Query: 68 GVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKA 127
GV+EF+A+EG IYLP W+M+ +LL+ GD+++VK+ L GS++KLQP + DFLDIS+PKA
Sbjct: 83 GVLEFVAEEGRIYLPQWIMQTLLLEPGDLMQVKSTDLPPGSFIKLQPQSVDFLDISDPKA 142
Query: 128 VLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIPPLDF 184
VLE LR++S LT D YN+ + I V+E KP+ A+S++ETD EVDF P+ +
Sbjct: 143 VLENALRNFSALTKDDVFSFSYNDTIFEIAVLEVKPNVRNGAISVVETDIEVDFAAPVGY 202
Query: 185 KEPEKPSSSSLSNRTLP 201
EPE+ +S N T P
Sbjct: 203 VEPERSKPASSVNSTRP 219
>gi|125524388|gb|EAY72502.1| hypothetical protein OsI_00362 [Oryza sativa Indica Group]
Length = 281
Score = 214 bits (544), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 94/186 (50%), Positives = 134/186 (72%)
Query: 2 YENHHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSA 61
Y N A F + YRC PIS + K + ++G+++ MP SALDRL YLHIEYPM F++ N +
Sbjct: 6 YLNLQSATFAQLYRCLPISLLKKENADDGNRVFMPVSALDRLGYLHIEYPMQFQIQNATT 65
Query: 62 GRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLD 121
+ +YCGV+EF ADEG I++P MME++ L+E D+V +++ S+ K +++KLQPHT DF
Sbjct: 66 LQTSYCGVLEFTADEGFIHIPTMMMEHLGLRENDLVLLRSTSIPKATFIKLQPHTSDFHK 125
Query: 122 ISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPP 181
+S P+ +LE R+Y CLTTG+TI V ++ YY++VVET+P+ AV +IETDCEV+F
Sbjct: 126 LSEPRYLLEYNFRNYFCLTTGETIAVAAGDRFYYLDVVETRPADAVCVIETDCEVEFDQA 185
Query: 182 LDFKEP 187
LD EP
Sbjct: 186 LDQAEP 191
>gi|54290482|dbj|BAD61491.1| putative ubiquitin fusion degradation protein [Oryza sativa
Japonica Group]
Length = 296
Score = 214 bits (544), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 94/186 (50%), Positives = 134/186 (72%)
Query: 2 YENHHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSA 61
Y N A F + YRC PIS + K + ++G+++ MP SALDRL YLHIEYPM F++ N +
Sbjct: 21 YLNLQSATFAQLYRCLPISLLKKENADDGNRVFMPVSALDRLGYLHIEYPMQFQIQNATT 80
Query: 62 GRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLD 121
+ +YCGV+EF ADEG I++P MME++ L+E D+V +++ S+ K +++KLQPHT DF
Sbjct: 81 LQTSYCGVLEFTADEGFIHIPTMMMEHLGLRENDLVLLRSTSIPKATFIKLQPHTSDFHK 140
Query: 122 ISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPP 181
+S P+ +LE R+Y CLTTG+TI V ++ YY++VVET+P+ AV +IETDCEV+F
Sbjct: 141 LSEPRYLLEYNFRNYFCLTTGETIAVAAGDRFYYLDVVETRPADAVCVIETDCEVEFDQA 200
Query: 182 LDFKEP 187
LD EP
Sbjct: 201 LDQAEP 206
>gi|47939988|gb|AAH72284.1| Unknown (protein for MGC:82436) [Xenopus laevis]
gi|56269190|gb|AAH87439.1| Unknown (protein for MGC:99253) [Xenopus laevis]
Length = 307
Score = 214 bits (544), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 115/262 (43%), Positives = 162/262 (61%), Gaps = 34/262 (12%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRCY +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 19 FSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+E +++V++ +L +Y K QP + DFLDI+NP
Sbjct: 79 HCGVLEFVADEGVCYLPHWMMQNLLLEEEGLLQVESVNLQVATYSKFQPQSPDFLDITNP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 139 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198
Query: 186 EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFT 245
EP++ + P+ E ++ L F F+
Sbjct: 199 EPDRHTQQEEQTEIEPDHSE------------YAADLG-----------------FRAFS 229
Query: 246 GSGRCLNG-KSSTQPTVSPSSP 266
GSG L+G K P+ SP P
Sbjct: 230 GSGNRLDGKKKGIDPSPSPLKP 251
>gi|195020459|ref|XP_001985200.1| GH14636 [Drosophila grimshawi]
gi|193898682|gb|EDV97548.1| GH14636 [Drosophila grimshawi]
Length = 334
Score = 214 bits (544), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 139/192 (72%), Gaps = 4/192 (2%)
Query: 9 AFERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
+F+ Y+C+ +S + ++ +E G KI+MPPSALD L L++EYPMLF+L+N R +
Sbjct: 17 SFQATYKCFSVSMLPGNERSDVEKGGKIIMPPSALDSLTRLNVEYPMLFKLTNKKKSRSS 76
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+ GV+EF+ADEG YLPYWMM+N+LL+EGDI+ +++ SL ++ K QPH+ DFLDI+NP
Sbjct: 77 HAGVLEFVADEGKCYLPYWMMDNLLLEEGDILSIESVSLQVATFSKFQPHSTDFLDITNP 136
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLT GD I + YN K Y + V+ETKP AVSIIE D V+F P+ +K
Sbjct: 137 KAVLENALRNFACLTKGDVIAIKYNKKVYELCVLETKPGNAVSIIECDMNVEFEAPVGYK 196
Query: 186 E-PEKPSSSSLS 196
+ E+ ++ L+
Sbjct: 197 DHSEQQQAAQLA 208
>gi|10998388|gb|AAG25922.1|AF233524_1 ubiquitin fusion degradation 1-like protein [Xenopus laevis]
Length = 305
Score = 213 bits (543), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 102/200 (51%), Positives = 144/200 (72%), Gaps = 4/200 (2%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRCY +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 19 FSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+E +++V++ +L +Y K QP + DFLDI+NP
Sbjct: 79 HCGVLEFVADEGVCYLPHWMMQNLLLEEEGLLQVESVNLQVATYSKFQPQSPDFLDITNP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 139 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198
Query: 186 EPEKPSSSSLSNRTLPEVKE 205
EP++ + P+ E
Sbjct: 199 EPDRHTQQEEQTEIEPDHSE 218
>gi|328875576|gb|EGG23940.1| ubiquitin fusion degradation protein UFD1 family protein
[Dictyostelium fasciculatum]
Length = 314
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 112/257 (43%), Positives = 156/257 (60%), Gaps = 10/257 (3%)
Query: 10 FERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGV 69
F +K+ ++ K LE G KI++PPSAL+ L+ L+I+YPMLFE+SN R ++CG+
Sbjct: 18 FNQKFNVLSMNISGKSGLEAGGKILLPPSALNTLSRLNIQYPMLFEISNQQKHRSSHCGI 77
Query: 70 MEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVL 129
EF A+EG+ Y+P WMMEN+ L++ DIV++K+ SL G +VK+QPH+ FLDISNPKAVL
Sbjct: 78 QEFSAEEGVCYMPKWMMENLHLKDNDIVDIKSTSLPSGQFVKIQPHSSSFLDISNPKAVL 137
Query: 130 ETTLRSYSCLTTGDTIMVPYNNKKYYINVVETK---PSTAVSIIETDCEVDFIPPLDFKE 186
E LR ++ LT + ++ YN KYY+ VVE K PS A+SIIETD VDF PPLD KE
Sbjct: 138 ENALRKFATLTKSEDFVIEYNKNKYYLKVVEIKPHNPSNAISIIETDISVDFAPPLDSKE 197
Query: 187 PEKPSSSSL----SNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFS 242
+PS S N + P+ G +K + + + ++ KF
Sbjct: 198 ATQPSGGSTPQASGNGSGGITFGSQPIGIGGNDKKKKTGDDSDSDESDSDD---DEPKFK 254
Query: 243 PFTGSGRCLNGKSSTQP 259
F G+G L+GK T P
Sbjct: 255 AFGGAGTRLDGKVGTPP 271
>gi|239788276|dbj|BAH70826.1| ACYPI006611 [Acyrthosiphon pisum]
Length = 317
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/192 (51%), Positives = 138/192 (71%), Gaps = 6/192 (3%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F YRC+ +S + ++ +E G KI+MPPSALD L L+I YPMLF+L+N + R T+
Sbjct: 14 FNTMYRCWSVSMLPGSEREDVERGGKIIMPPSALDVLTRLNINYPMLFKLTNRKSNRQTH 73
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
CGV+EFIA++ IY+PYWMM+N+LL EGD+V+V++ SL ++ K QP +FLDI+NPK
Sbjct: 74 CGVLEFIAEDEKIYIPYWMMKNLLLDEGDVVQVESVSLEVATFSKFQPQNSEFLDITNPK 133
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
AVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D V+F P+ ++E
Sbjct: 134 AVLENCLRNFACLTTGDVIAIKYNQKVYEMCVLETKPGNAVSIIECDMNVEFAAPVGYQE 193
Query: 187 P---EKPSSSSL 195
P +KP++ +
Sbjct: 194 PTHEKKPAAEDM 205
>gi|326320041|ref|NP_001191887.1| ubiquitin fusion degradation protein 1 homolog [Acyrthosiphon
pisum]
Length = 300
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/192 (51%), Positives = 138/192 (71%), Gaps = 6/192 (3%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F YRC+ +S + ++ +E G KI+MPPSALD L L+I YPMLF+L+N + R T+
Sbjct: 14 FNTMYRCWSVSMLPGSEREDVERGGKIIMPPSALDVLTRLNINYPMLFKLTNRKSNRQTH 73
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
CGV+EFIA++ IY+PYWMM+N+LL EGD+V+V++ SL ++ K QP +FLDI+NPK
Sbjct: 74 CGVLEFIAEDEKIYIPYWMMKNLLLDEGDVVQVESVSLEVATFSKFQPQNSEFLDITNPK 133
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
AVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D V+F P+ ++E
Sbjct: 134 AVLENCLRNFACLTTGDVIAIKYNQKVYEMCVLETKPGNAVSIIECDMNVEFAAPVGYQE 193
Query: 187 P---EKPSSSSL 195
P +KP++ +
Sbjct: 194 PTHEKKPAAEDM 205
>gi|17737561|ref|NP_524023.1| ubiquitin fusion-degradation 1-like [Drosophila melanogaster]
gi|12230660|sp|Q9VTF9.1|UFD1_DROME RecName: Full=Ubiquitin fusion degradation protein 1 homolog;
Short=UB fusion protein 1
gi|12656069|gb|AAK00730.1|AF228282_1 ubiquitin fusion-degradation 1-like protein [Drosophila
melanogaster]
gi|7294755|gb|AAF50090.1| ubiquitin fusion-degradation 1-like [Drosophila melanogaster]
gi|12656071|gb|AAK00731.1| ubiquitin fusion-degradation 1-like protein [Drosophila
melanogaster]
gi|16768128|gb|AAL28283.1| GH18603p [Drosophila melanogaster]
gi|220944186|gb|ACL84636.1| Ufd1-like-PA [synthetic construct]
gi|220954134|gb|ACL89610.1| Ufd1-like-PA [synthetic construct]
Length = 316
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 95/188 (50%), Positives = 133/188 (70%), Gaps = 3/188 (1%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F Y+C+ +S + ++ +E G KI+MPPSALD L L++EYPMLF+L+N R ++
Sbjct: 17 FHANYKCFSVSMLPGNERTDVEKGGKIIMPPSALDTLTRLNVEYPMLFKLTNVKKSRSSH 76
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EF+ADEG YLP+WMMEN+LL EGDI+ +++ SL ++ K QPH+ DFLDI+NPK
Sbjct: 77 AGVLEFVADEGKCYLPHWMMENLLLGEGDILNIESVSLPVATFSKFQPHSTDFLDITNPK 136
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
AVLE LR+++CLT GD I + YN K Y + V+ETKP AVSIIE D V+F P+ +K+
Sbjct: 137 AVLENALRNFACLTRGDVIAIKYNKKVYELCVLETKPGNAVSIIECDMNVEFEAPVGYKD 196
Query: 187 PEKPSSSS 194
+ +S
Sbjct: 197 HSETQASG 204
>gi|118794962|ref|XP_321840.2| AGAP001307-PA [Anopheles gambiae str. PEST]
gi|116116547|gb|EAA01785.3| AGAP001307-PA [Anopheles gambiae str. PEST]
Length = 303
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 95/182 (52%), Positives = 133/182 (73%), Gaps = 3/182 (1%)
Query: 6 HDAAFERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAG 62
H F Y+CY +S + ++ +ENG KI+MPPSALD+L L++ YPMLF+++N S
Sbjct: 14 HSRPFNTTYKCYSVSMLPGNERQDVENGGKIIMPPSALDQLTRLNVVYPMLFKITNGSIN 73
Query: 63 RVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDI 122
R T+ GV+EF+ADEG IY+PYWMM N+ L +GDIVE+++ S+ +Y K QP + +FLDI
Sbjct: 74 RSTHAGVLEFVADEGKIYMPYWMMHNLALDQGDIVEIESVSIPVATYSKFQPQSVEFLDI 133
Query: 123 SNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPL 182
+NPKAVLE LR+++CLTTGD I + YNN Y ++V+ETKP AV+IIE D V+F PP+
Sbjct: 134 TNPKAVLENCLRNFACLTTGDLIAIKYNNTTYELSVLETKPGPAVTIIECDMNVEFAPPV 193
Query: 183 DF 184
+
Sbjct: 194 GY 195
>gi|125568991|gb|EAZ10506.1| hypothetical protein OsJ_00341 [Oryza sativa Japonica Group]
Length = 295
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 94/186 (50%), Positives = 134/186 (72%)
Query: 2 YENHHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSA 61
Y N A F + YRC PIS + K + ++G+++ MP SALDRL YLHIEYPM F++ N +
Sbjct: 6 YLNLQSATFAQLYRCLPISLLKKENADDGNRVFMPVSALDRLGYLHIEYPMQFQIQNATT 65
Query: 62 GRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLD 121
+ +YCGV+EF ADEG I++P MME++ L+E D+V +++ S+ K +++KLQPHT DF
Sbjct: 66 LQTSYCGVLEFTADEGFIHIPTMMMEHLGLRENDLVLLRSTSIPKATFIKLQPHTSDFHK 125
Query: 122 ISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPP 181
+S P+ +LE R+Y CLTTG+TI V ++ YY++VVET+P+ AV +IETDCEV+F
Sbjct: 126 LSEPRYLLEYNFRNYFCLTTGETIAVAAGDRFYYLDVVETRPADAVCVIETDCEVEFDQA 185
Query: 182 LDFKEP 187
LD EP
Sbjct: 186 LDQAEP 191
>gi|195589441|ref|XP_002084460.1| GD12819 [Drosophila simulans]
gi|194196469|gb|EDX10045.1| GD12819 [Drosophila simulans]
Length = 316
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 95/188 (50%), Positives = 133/188 (70%), Gaps = 3/188 (1%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F Y+C+ +S + ++ +E G KI+MPPSALD L L++EYPMLF+L+N R ++
Sbjct: 17 FHANYKCFSVSMLPGNERTDVEKGGKIIMPPSALDTLTRLNVEYPMLFKLTNGKKSRSSH 76
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EF+ADEG YLP+WMMEN+LL EGDI+ +++ SL ++ K QPH+ DFLDI+NPK
Sbjct: 77 AGVLEFVADEGKCYLPHWMMENLLLGEGDILNIESVSLPVATFSKFQPHSTDFLDITNPK 136
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
AVLE LR+++CLT GD I + YN K Y + V+ETKP AVSIIE D V+F P+ +K+
Sbjct: 137 AVLENALRNFACLTKGDVIAIKYNKKVYELCVLETKPGNAVSIIECDMNVEFEAPVGYKD 196
Query: 187 PEKPSSSS 194
+ +S
Sbjct: 197 HSETQASG 204
>gi|396495931|ref|XP_003844665.1| similar to ubiquitin fusion degradation protein 1 [Leptosphaeria
maculans JN3]
gi|312221245|emb|CBY01186.1| similar to ubiquitin fusion degradation protein 1 [Leptosphaeria
maculans JN3]
Length = 344
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 99/192 (51%), Positives = 135/192 (70%), Gaps = 7/192 (3%)
Query: 10 FERKYRCYPISFIDKPHLE---NGDKIVMPPSALDRLAYLHIEYPMLFELSNTSA-GRVT 65
F+ +RCYPI+ + P E +G K+ +PPSALD+L +HI YPMLFEL N GR T
Sbjct: 16 FDEYFRCYPIAMLPGPEREEANHGGKVFLPPSALDKLTRMHITYPMLFELINGKQDGRKT 75
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+ GV+EFIA+EG IYLPYW+M+ +LL+ GD+++VK+ L G+++KLQP FLDIS+P
Sbjct: 76 HAGVLEFIAEEGKIYLPYWLMQTLLLEPGDLLQVKSTDLPLGTFIKLQPQDPSFLDISDP 135
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETK---PSTAVSIIETDCEVDFIPPL 182
KAVLE R++SCLTTGD YN+ Y I V+ET+ PS A+ +ETD VDF PP+
Sbjct: 136 KAVLENAFRNFSCLTTGDIFTFSYNDNVYSIAVLETRPDHPSKAICTLETDLSVDFAPPV 195
Query: 183 DFKEPEKPSSSS 194
++EP+K S +S
Sbjct: 196 GYQEPQKTSGTS 207
>gi|401408851|ref|XP_003883874.1| Ubiquitin fusion-degradation protein (ISS),related [Neospora
caninum Liverpool]
gi|325118291|emb|CBZ53842.1| Ubiquitin fusion-degradation protein (ISS),related [Neospora
caninum Liverpool]
Length = 340
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 97/185 (52%), Positives = 132/185 (71%)
Query: 3 ENHHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAG 62
E + F + Y C+P+SFI K +E G+KI++P SAL LA LHI +PMLFE+ N +
Sbjct: 16 EGGARSGFSQCYSCFPVSFIGKDDMEKGNKILLPQSALHALARLHISWPMLFEVVNEAKD 75
Query: 63 RVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDI 122
R T+ GV+EFIA+EG + PYWMM+N+ L+EGDIV V+N SL KG++V+LQP T +FL I
Sbjct: 76 RRTHTGVLEFIAEEGTCHFPYWMMQNLGLEEGDIVRVRNISLPKGTFVQLQPVTTEFLQI 135
Query: 123 SNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPL 182
SNP+AVLE LR Y+ LT GD I +P+ +K + + V + +P+ AVSIIETD EV+F P
Sbjct: 136 SNPRAVLEVALRGYAALTVGDLIYLPFLDKNFQLLVTDLRPAPAVSIIETDMEVEFKAPE 195
Query: 183 DFKEP 187
+ EP
Sbjct: 196 GYVEP 200
>gi|332374826|gb|AEE62554.1| unknown [Dendroctonus ponderosae]
Length = 298
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 124/338 (36%), Positives = 184/338 (54%), Gaps = 62/338 (18%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ Y+C+ ++ + ++ +E G KI+MPPSAL++L L+I YPMLF+L+N + R T+
Sbjct: 16 FDATYQCFSVAMLPGNERQDVERGGKIIMPPSALEKLTRLNINYPMLFKLTNKKSKRETH 75
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EF+ADEG IYLP WMM NM L EGD+V++++ SL G++ + QP + DFLDI+NP
Sbjct: 76 SGVLEFVADEGKIYLPLWMMHNMNLDEGDLVQIESVSLPVGTFSRFQPLSSDFLDITNPT 135
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
AVLE LRS++CLT GD I V YN K Y + V+ETKP A+SIIE D V+F P+ ++E
Sbjct: 136 AVLENCLRSFACLTKGDIIAVQYNQKVYELLVLETKPGDAISIIECDMNVEFAAPVGYQE 195
Query: 187 PEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTG 246
PE P EE LD P ++ EP + F F G
Sbjct: 196 PEVPKKRD----------EEMVLD----------------PSDLMPEP----SGFVAFKG 225
Query: 247 SGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVF--GSNANQ 304
+G L+GK + S+S+ Q + K V+ G
Sbjct: 226 AGNRLDGK---------------------------KRKDSSSADQGASKPVYVRGIPDYD 258
Query: 305 SSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
GT + + +++ + + +E +F+ F+G +SLR
Sbjct: 259 YQIGTLRFIRQTAKPKNNENQENDEFKPFSGTGFSLRA 296
>gi|237832843|ref|XP_002365719.1| ubiquitin fusion degradation domain-containing protein [Toxoplasma
gondii ME49]
gi|211963383|gb|EEA98578.1| ubiquitin fusion degradation domain-containing protein [Toxoplasma
gondii ME49]
Length = 335
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 96/189 (50%), Positives = 134/189 (70%)
Query: 8 AAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYC 67
+ F + Y C+P+SFI K +E G+KI++P SAL LA LHI +PMLFE+ N + R T+
Sbjct: 21 SGFSQCYSCFPVSFIGKDEMEKGNKILLPQSALHALARLHISWPMLFEVVNEAKDRRTHT 80
Query: 68 GVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKA 127
GV+EF+A+EG + PYWMM+N+ L+EGDIV V+N SL KG++V+LQP T +FL +SNP+A
Sbjct: 81 GVLEFVAEEGTCHFPYWMMQNLGLEEGDIVRVRNISLPKGTFVELQPVTTEFLQVSNPRA 140
Query: 128 VLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEP 187
VLE LR Y+ LT GD I +P+ +K + + V + +P+ AVSIIETD EV+F P + EP
Sbjct: 141 VLEVALRGYAALTVGDLIYLPFLDKGFQLLVTDLRPAPAVSIIETDMEVEFKAPEGYVEP 200
Query: 188 EKPSSSSLS 196
+ S S
Sbjct: 201 TVRAKQSTS 209
>gi|195326718|ref|XP_002030072.1| GM24769 [Drosophila sechellia]
gi|194119015|gb|EDW41058.1| GM24769 [Drosophila sechellia]
Length = 316
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 95/188 (50%), Positives = 133/188 (70%), Gaps = 3/188 (1%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F Y+C+ +S + ++ +E G KI+MPPSALD L L++EYPMLF+L+N R ++
Sbjct: 17 FHPNYKCFSVSMLPGNERTDVEKGGKIIMPPSALDTLTRLNVEYPMLFKLTNGKKSRSSH 76
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EF+ADEG YLP+WMMEN+LL EGDI+ +++ SL ++ K QPH+ DFLDI+NPK
Sbjct: 77 AGVLEFVADEGKCYLPHWMMENLLLGEGDILNIESVSLPVATFSKFQPHSTDFLDITNPK 136
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
AVLE LR+++CLT GD I + YN K Y + V+ETKP AVSIIE D V+F P+ +K+
Sbjct: 137 AVLENALRNFACLTKGDVIAIKYNKKVYELCVLETKPGNAVSIIECDMNVEFEAPVGYKD 196
Query: 187 PEKPSSSS 194
+ +S
Sbjct: 197 HSETQASG 204
>gi|1654346|gb|AAD08720.1| ubiquitin fusion-degradation 1 like protein [Homo sapiens]
Length = 343
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 116/298 (38%), Positives = 164/298 (55%), Gaps = 70/298 (23%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRC+ +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 19 FSTQYRCFSVSMLAWPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 66 YCGVMEFIADEGLIYLPYWM------------------------------------MENM 89
+CGV+EF+ADEG+ YLP+WM M+N+
Sbjct: 79 HCGVLEFVADEGICYLPHWMMQNLLLEEDGLVQLETVNLQVATYSKSKFCYLPHWMMQNL 138
Query: 90 LLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDTIMVPY 149
LL+EG +V+V++ +L +Y K QP + DFLDI+NPKAVLE LR+++CLTTGD I + Y
Sbjct: 139 LLEEGGLVQVESVNLQVATYSKFQPQSADFLDITNPKAVLENALRNFACLTTGDVIAINY 198
Query: 150 NNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEKPSSSSLSNRTLPEVKEEPPL 209
N K Y + V+ETKP AVSI E D VDF PL +KEPE+ +V+ E
Sbjct: 199 NEKIYELRVMETKPDKAVSIHECDMNVDFDAPLGYKEPER------------QVQHEEST 246
Query: 210 DFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTGSGRCLNG-KSSTQPTVSPSSP 266
+ + + L F F+GSG L+G K +P+ SP P
Sbjct: 247 EGEADHSGYAGELG-----------------FRAFSGSGNRLDGKKKGVEPSPSPIKP 287
>gi|221488176|gb|EEE26390.1| ubiquitin fusion degradation UFD1 domain-containing protein
[Toxoplasma gondii GT1]
gi|221508688|gb|EEE34257.1| ubiquitin fusion degradation domain-containing protein, putative
[Toxoplasma gondii VEG]
Length = 317
Score = 210 bits (534), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 96/189 (50%), Positives = 134/189 (70%)
Query: 8 AAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYC 67
+ F + Y C+P+SFI K +E G+KI++P SAL LA LHI +PMLFE+ N + R T+
Sbjct: 21 SGFSQCYSCFPVSFIGKDEMEKGNKILLPQSALHALARLHISWPMLFEVVNEAKDRRTHT 80
Query: 68 GVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKA 127
GV+EF+A+EG + PYWMM+N+ L+EGDIV V+N SL KG++V+LQP T +FL +SNP+A
Sbjct: 81 GVLEFVAEEGTCHFPYWMMQNLGLEEGDIVRVRNISLPKGTFVELQPVTTEFLQVSNPRA 140
Query: 128 VLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEP 187
VLE LR Y+ LT GD I +P+ +K + + V + +P+ AVSIIETD EV+F P + EP
Sbjct: 141 VLEVALRGYAALTVGDLIYLPFLDKGFQLLVTDLRPAPAVSIIETDMEVEFKAPEGYVEP 200
Query: 188 EKPSSSSLS 196
+ S S
Sbjct: 201 TVRAKQSTS 209
>gi|312375159|gb|EFR22582.1| hypothetical protein AND_14508 [Anopheles darlingi]
Length = 294
Score = 210 bits (534), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 94/178 (52%), Positives = 132/178 (74%), Gaps = 3/178 (1%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F Y+CY +S + ++ +ENG KI+MPPSALD+L L++ YPMLF+L+N+ RVT+
Sbjct: 9 FNTTYKCYSVSMLPGNERQDVENGGKIIMPPSALDQLTRLNVVYPMLFKLTNSKINRVTH 68
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EF+ADEG IY+PYWMM N+LL+EGD VE++ S+ +Y K +P + +FLDI+NPK
Sbjct: 69 AGVLEFVADEGKIYIPYWMMRNLLLEEGDFVEIECVSIPVATYSKFEPQSVEFLDITNPK 128
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDF 184
AVLE LR+++CLTTGD I + YNN Y ++V+ETKP AV+IIE D V+F P+ +
Sbjct: 129 AVLENCLRNFACLTTGDLIAIKYNNTTYELSVLETKPGPAVTIIECDMNVEFAAPVGY 186
>gi|451854566|gb|EMD67859.1| hypothetical protein COCSADRAFT_293916 [Cochliobolus sativus
ND90Pr]
gi|451995858|gb|EMD88325.1| hypothetical protein COCHEDRAFT_1181249 [Cochliobolus
heterostrophus C5]
gi|451999648|gb|EMD92110.1| hypothetical protein COCHEDRAFT_1173688 [Cochliobolus
heterostrophus C5]
Length = 357
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 98/192 (51%), Positives = 135/192 (70%), Gaps = 7/192 (3%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSA-GRVT 65
F+ +RCYPI+ + ++P +G K+ +PPSALD+L LHI YPMLFEL N G+ T
Sbjct: 29 FDEYFRCYPIAMLPGPERPEANHGGKVFLPPSALDKLTRLHITYPMLFELINGKQDGKKT 88
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+ GV+EFIA+EG IYLPYW+ME + L+ GD+++VK+ + G+++KLQP FL+IS+P
Sbjct: 89 HAGVLEFIAEEGKIYLPYWLMETLKLEPGDLLQVKSTDIPLGTFIKLQPQDSSFLEISDP 148
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETK---PSTAVSIIETDCEVDFIPPL 182
KAVLE R++SCLTTGD YN+ Y I V+ETK PS AV IETD VDF PP+
Sbjct: 149 KAVLENAFRNFSCLTTGDIFTFAYNDNVYSIAVLETKPEHPSKAVCTIETDLSVDFAPPV 208
Query: 183 DFKEPEKPSSSS 194
++EP++ S +S
Sbjct: 209 GYQEPQRTSGTS 220
>gi|328790675|ref|XP_396320.2| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Apis
mellifera]
Length = 288
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/338 (37%), Positives = 180/338 (53%), Gaps = 67/338 (19%)
Query: 10 FERKYRCYPISFID---KPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F YRC+ +S + + +E G KI+MPPSAL+ L L+I +PMLF+LSN R+T+
Sbjct: 9 FNNHYRCFSVSMLPGTYRRDVERGGKIIMPPSALEHLTRLNIRFPMLFKLSNEKTNRITH 68
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
CGV+EF+ADEG +YLP WMM N+LLQEGD++ V++ +L ++ + QP ++DFLDI+NPK
Sbjct: 69 CGVLEFVADEGRVYLPCWMMYNLLLQEGDLINVESVNLPVATFSRFQPQSEDFLDITNPK 128
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
AVLE LR+++CLTTGD I + YN + Y + V+ET+P AV+IIE D V+F PPL + E
Sbjct: 129 AVLENGLRNFACLTTGDIIAIKYNQRIYEMCVLETRPGPAVTIIECDMNVEFAPPLGYVE 188
Query: 187 PEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTG 246
E K+E +D P ++ P + F PF G
Sbjct: 189 KETK-------------KDENVVD----------------PADLMPAP----SGFVPFKG 215
Query: 247 SGRCLNGKSS---TQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNAN 303
G L+GK +P V+ + P GI K G L F
Sbjct: 216 EGNRLDGKKRRDFAKPEVTTNKPA-------YVRGI-------PDYDYKIGTLTFLRIIK 261
Query: 304 QSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
+N K ++ +F+AFTG+ +SLR
Sbjct: 262 PVNNKEAK--------------DQDEFKAFTGEGFSLR 285
>gi|198430047|ref|XP_002122249.1| PREDICTED: similar to ubiquitin fusion degradation 1-like [Ciona
intestinalis]
Length = 315
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 111/253 (43%), Positives = 155/253 (61%), Gaps = 33/253 (13%)
Query: 10 FERKYRCYPISF-----IDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRV 64
F YRCY SF ++ G KI+MPPSALD+L+ L+I YPMLF+L+N+ GR
Sbjct: 19 FSNGYRCYSSSFGALSDQKSKDIQKGGKIIMPPSALDQLSRLNISYPMLFKLTNSPKGRS 78
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
T+CGV+EF+A+EG+IYLPYWMM+N+LL EGD+V+++N +L +Y + QP + DF DISN
Sbjct: 79 THCGVLEFVAEEGVIYLPYWMMQNLLLGEGDLVQLENCTLPVATYARFQPQSTDFHDISN 138
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDF 184
PKAVLE LR+++CLT D I + YN+++Y + V E +P AV IIE D ++F P+ +
Sbjct: 139 PKAVLENALRNFACLTKSDMIAIQYNSRQYELCVQEVRPQNAVCIIECDISLEFDAPVGY 198
Query: 185 KEPEKPSSSSLSNRTLPEVKEEPPLDFKGPE-KPSSSSLSNRTPPEVK--EEPPKKIAKF 241
EPP+ P+ K S + TP K EE K+ + F
Sbjct: 199 ---------------------EPPV----PKPKQVESDMIVGTPDMKKAIEEYMKETSGF 233
Query: 242 SPFTGSGRCLNGK 254
S F G+G L+GK
Sbjct: 234 SAFEGTGNRLDGK 246
>gi|350401374|ref|XP_003486131.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Bombus
impatiens]
Length = 293
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 125/338 (36%), Positives = 181/338 (53%), Gaps = 67/338 (19%)
Query: 10 FERKYRCYPISFID---KPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F YRC+ +S + + +E G KI+MPPSAL+ L L+I +PMLF LSN R+T+
Sbjct: 14 FNNHYRCFSVSMLPGTYRRDVERGGKIIMPPSALEHLTRLNIRFPMLFRLSNEKTNRITH 73
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
CGV+EF+ADEG +YLP WMM N+LLQEG+++ V++ +L ++ + QP ++DFLDI+NPK
Sbjct: 74 CGVLEFVADEGRVYLPCWMMYNLLLQEGELINVESVNLPVATFSRFQPQSEDFLDITNPK 133
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
AVLE LR+++CLTTGD I + YN + Y + V+ET+P +AV+IIE D V+F PPL + E
Sbjct: 134 AVLENGLRNFACLTTGDIIAIKYNQRIYEMCVLETRPGSAVTIIECDMNVEFAPPLGYVE 193
Query: 187 PEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTG 246
E K+E +D P ++ P + F PF G
Sbjct: 194 KETK-------------KDENVVD----------------PADLMPAP----SGFVPFKG 220
Query: 247 SGRCLNGKSS---TQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNAN 303
G L+GK +P V+ S P GI K G L F +
Sbjct: 221 EGNRLDGKKRRDFAKPEVTTSKPAY-------VRGI-------PDYDYKIGTLTFLRISK 266
Query: 304 QSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
+N + ++ +F+AFTG+ +SLR
Sbjct: 267 PVNN--------------KEAKDPDEFKAFTGEGFSLR 290
>gi|258597686|ref|XP_001348351.2| Ubiquitin fusion degradation protein UFD1, putative [Plasmodium
falciparum 3D7]
gi|255528789|gb|AAN36790.2| Ubiquitin fusion degradation protein UFD1, putative [Plasmodium
falciparum 3D7]
Length = 282
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 134/178 (75%)
Query: 10 FERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGV 69
F+ +Y CYP+SFI K +ENG+KI++P +AL+ LA HI +PMLFE+SN + T+ GV
Sbjct: 22 FQEEYTCYPVSFIGKDDMENGNKIILPQTALNALARRHISWPMLFEVSNPYTDKRTHSGV 81
Query: 70 MEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVL 129
+EFI+DEG ++PYWMM+ + L+EGDIV V + SL KG++VKL+P +KDF+++SN +AVL
Sbjct: 82 LEFISDEGTCHMPYWMMQQLNLKEGDIVRVTSVSLPKGTFVKLKPCSKDFMELSNHRAVL 141
Query: 130 ETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEP 187
ET LR+Y+ LT GD I++ Y K Y I +V+ KP+ A +IIETD EV+F P+D EP
Sbjct: 142 ETALRNYATLTIGDNIVIHYLGKTYEIKIVDLKPAFACTIIETDVEVEFEEPIDHSEP 199
>gi|195493349|ref|XP_002094378.1| GE20233 [Drosophila yakuba]
gi|194180479|gb|EDW94090.1| GE20233 [Drosophila yakuba]
Length = 316
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 130/180 (72%), Gaps = 3/180 (1%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F Y+C+ +S + ++ +E G KI+MPPSALD L L++EYPMLF+L+N R ++
Sbjct: 17 FHATYKCFSVSMLPGNERSDVEKGGKIIMPPSALDTLTRLNVEYPMLFKLTNGKKSRSSH 76
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EF+ADEG YLPYWMM+N+LL EGDI+ +++ SL ++ K QPH+ DFLDI+NPK
Sbjct: 77 AGVLEFVADEGKCYLPYWMMDNLLLVEGDILNIESVSLPVATFSKFQPHSTDFLDITNPK 136
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
AVLE LR+++CLT GD I + YN K Y + V+ETKP AVSIIE D V+F P+ +K+
Sbjct: 137 AVLENALRNFACLTKGDVIAIKYNKKVYELCVLETKPGNAVSIIECDMNVEFEAPVGYKD 196
>gi|307212287|gb|EFN88095.1| Ubiquitin fusion degradation protein 1-like protein [Harpegnathos
saltator]
Length = 417
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 128/335 (38%), Positives = 187/335 (55%), Gaps = 58/335 (17%)
Query: 10 FERKYRCYPISFID---KPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F +Y+C+ +S + + +E G KI+MPPSAL++L L+I YPMLF+L+N R+T+
Sbjct: 134 FNTQYKCFSVSMLPGTYRQDVERGGKIIMPPSALEQLTRLNIIYPMLFKLTNRKTNRITH 193
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
CGV+EF+ADEG +YLPYWMM N+LL+EG+++ V++ SL ++ + QP ++DFLDI+NPK
Sbjct: 194 CGVLEFVADEGKVYLPYWMMHNLLLEEGELLNVESVSLPVATFSRFQPQSEDFLDITNPK 253
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
AVLE LRS++CLTTGD I + YN K Y + V+ET+P AVSIIE D V+F PP+ +KE
Sbjct: 254 AVLENGLRSFACLTTGDVIAIKYNQKIYEMCVLETRPGLAVSIIECDMNVEFAPPVGYKE 313
Query: 187 PEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTG 246
PE+ K+E ++ L+N P EP + F PF G
Sbjct: 314 PERHIK-----------KDEEQME----------DLANLMP-----EP----SGFVPFKG 343
Query: 247 SGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNANQSS 306
G L+GK D P+Q + G L F N ++
Sbjct: 344 EGVRLDGKKRK-----------DWPKQEKTVSKPAYIRGIPDYDYQIGTLRFLRNMKPAN 392
Query: 307 NGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
N ++++ +F+AFTG+ +SLR
Sbjct: 393 N--------------KEMKDTDEFKAFTGEGFSLR 413
>gi|378728391|gb|EHY54850.1| hypothetical protein HMPREF1120_03012 [Exophiala dermatitidis
NIH/UT8656]
Length = 388
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 129/340 (37%), Positives = 187/340 (55%), Gaps = 21/340 (6%)
Query: 10 FERKYRCYPISFIDKPHLEN---GDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYP+ ++ P ++ G K+ +PPSALD+L LHI YPM+FEL N +AG+ T+
Sbjct: 28 FDEYYRCYPVVMMNGPDRKSVNYGGKVFLPPSALDKLTKLHIAYPMVFELVNGNAGKKTH 87
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EFIA+EG IYLP W+M + L GD+V++K+ L G ++KLQP + FLDIS+P+
Sbjct: 88 AGVLEFIAEEGRIYLPQWLMRTLELDPGDLVQIKSTDLPPGKFIKLQPQSPAFLDISDPR 147
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIPPLD 183
AVLE R++SCLT GD YN++ Y I V+E +P T A+ +ETD EVDF PP+
Sbjct: 148 AVLENAFRNFSCLTKGDVFTFEYNDQTYDIAVLEIRPDTESHAIVTMETDLEVDFAPPVG 207
Query: 184 FKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSP 243
+ PE+ S +S + R+ P+ F+G S + S E + ++ S
Sbjct: 208 YVPPERTSGTS-TPRSGVGKPHGGPIHFQGTMAQSINYASIAPSSTTAEAGARAVS--SN 264
Query: 244 FTGSGRCLNG-KSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNA 302
F G LN K S PT + S+P+ A + + R KL FG
Sbjct: 265 FLYGGHKLNSKKGSKAPTPNASTPVAGASTNAPAAALPRRGNGPQPLRLPPNKLFFGFEI 324
Query: 303 NQSSNGTPKVLPKSSSGEP-PQVEEKPKFQAFTGKKYSLR 341
+ ++ +GEP P E KP+FQ G+ +LR
Sbjct: 325 K-------PLRKRNENGEPVPPDEVKPRFQ---GQGQTLR 354
>gi|225554579|gb|EEH02875.1| ubiquitin fusion degradation protein [Ajellomyces capsulatus
G186AR]
Length = 401
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 93/186 (50%), Positives = 130/186 (69%), Gaps = 6/186 (3%)
Query: 10 FERKYRCYPISFIDKPHLEN---GDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYP++ + P EN G K++MPPSALD+L LHI YPMLFEL N R T+
Sbjct: 30 FDEFYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNRVKDRTTH 89
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EFIA+EG IYLP+W+M+ +LL+ GD++++K+ L G Y+KLQ + FLDIS+PK
Sbjct: 90 AGVLEFIAEEGKIYLPFWIMQTLLLEPGDLLQIKSTDLPPGQYIKLQAQSTSFLDISDPK 149
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPS---TAVSIIETDCEVDFIPPLD 183
AVLE R++SCL+ D YN+ Y + V+ETKP A+S++ETD EVDF P+
Sbjct: 150 AVLENAFRNFSCLSKDDIFTFSYNDHTYEMAVLETKPQHSKNAISVLETDLEVDFATPVG 209
Query: 184 FKEPEK 189
++EP++
Sbjct: 210 YEEPKR 215
>gi|340729118|ref|XP_003402855.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Bombus
terrestris]
Length = 293
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 125/338 (36%), Positives = 180/338 (53%), Gaps = 67/338 (19%)
Query: 10 FERKYRCYPISFID---KPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F YRC+ +S + + +E G KI+MPPSAL+ L L+I +PMLF LSN R+T+
Sbjct: 14 FNNHYRCFSVSMLPGTYRRDVERGGKIIMPPSALEHLTRLNIRFPMLFRLSNEKTNRITH 73
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
CGV+EF+ADEG +YLP WMM N+LLQEG+++ V++ +L ++ + QP ++DFLDI+NPK
Sbjct: 74 CGVLEFVADEGRVYLPCWMMYNLLLQEGELINVESVNLPVATFSRFQPQSEDFLDITNPK 133
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
AVLE LR+++CLTTGD I + YN + Y + V+ET+P AV+IIE D V+F PPL + E
Sbjct: 134 AVLENGLRNFACLTTGDIIAIKYNQRIYEMCVLETRPGPAVTIIECDMNVEFAPPLGYVE 193
Query: 187 PEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTG 246
E K+E +D P ++ P + F PF G
Sbjct: 194 KETK-------------KDENVVD----------------PADLMPAP----SGFVPFKG 220
Query: 247 SGRCLNGKSS---TQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNAN 303
G L+GK +P V+ S P GI K G L F +
Sbjct: 221 EGNRLDGKKRRDFAKPEVTTSKPAY-------VRGI-------PDYDYKIGTLTFLRISK 266
Query: 304 QSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
+N + ++ +F+AFTG+ +SLR
Sbjct: 267 PVNN--------------KEAKDPDEFKAFTGEGFSLR 290
>gi|325094858|gb|EGC48168.1| ubiquitin fusion degradation protein [Ajellomyces capsulatus H88]
Length = 444
Score = 207 bits (527), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 94/192 (48%), Positives = 133/192 (69%), Gaps = 6/192 (3%)
Query: 10 FERKYRCYPISFIDKPHLEN---GDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYP++ + P EN G K++MPPSALD+L LHI YPMLFEL N R T+
Sbjct: 73 FDEFYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNRVKDRTTH 132
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EFIA+EG IYLP+W+M+ +LL+ GD++++K+ L G Y+KLQ + FLDIS+PK
Sbjct: 133 AGVLEFIAEEGKIYLPFWIMQTLLLEPGDLLQIKSTDLPPGQYIKLQAQSTSFLDISDPK 192
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPS---TAVSIIETDCEVDFIPPLD 183
AVLE R++SCL+ D YN+ Y + V+ETKP A+S++ETD EVDF P+
Sbjct: 193 AVLENAFRNFSCLSKDDIFTFSYNDHIYEMAVLETKPQHSKNAISVLETDLEVDFATPVG 252
Query: 184 FKEPEKPSSSSL 195
++EP++ + S+
Sbjct: 253 YEEPKRINEPSM 264
>gi|398393980|ref|XP_003850449.1| hypothetical protein MYCGRDRAFT_74587 [Zymoseptoria tritici IPO323]
gi|339470327|gb|EGP85425.1| hypothetical protein MYCGRDRAFT_74587 [Zymoseptoria tritici IPO323]
Length = 360
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 93/191 (48%), Positives = 131/191 (68%), Gaps = 6/191 (3%)
Query: 10 FERKYRCYPISFIDKPH---LENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYPI + P L +G KI +P SALD+L LHI YPM FE++N + R +
Sbjct: 29 FDEYYRCYPIVMMSGPEREALNHGGKIFLPASALDKLTQLHISYPMQFEITNGARERTAH 88
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EF A+EG Y P+W+M+ + L+ GD++++K+ L GS++KLQP +FL+IS+PK
Sbjct: 89 AGVLEFTAEEGRCYFPWWLMQTLHLEAGDLIQIKSTDLPLGSFIKLQPQNTNFLEISDPK 148
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIPPLD 183
AVLET R++SCLT GD YN+ Y I V+E KP T A+S++ETD EVDF PP+
Sbjct: 149 AVLETAFRNFSCLTLGDVFTFSYNDTVYEIAVLEVKPDTGKKAISVVETDLEVDFAPPVG 208
Query: 184 FKEPEKPSSSS 194
++EP+K S +S
Sbjct: 209 YEEPKKNSGTS 219
>gi|281200974|gb|EFA75188.1| ubiquitin fusion degradation protein UFD1 family protein
[Polysphondylium pallidum PN500]
Length = 345
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 116/268 (43%), Positives = 163/268 (60%), Gaps = 16/268 (5%)
Query: 10 FERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGV 69
F + Y I+ K HLE+G KI++PPSAL+ L+ LHI++PM FE+SNT R ++CGV
Sbjct: 28 FNQNYCVMNIAIAGKAHLESGGKILLPPSALNTLSRLHIQFPMQFEISNTDKHRSSHCGV 87
Query: 70 MEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVL 129
+EF A+EG+ Y+P WMM N+ L++ DIV +K+A+L G +VK+QPHT+ FL+ +NPKA+L
Sbjct: 88 LEFTAEEGVCYMPKWMMNNLQLKDQDIVTIKSATLPNGQFVKIQPHTQAFLETANPKAIL 147
Query: 130 ETTLRSYSCLTTGDTIMVPYNNKKYYINVVETK---PSTAVSIIETDCEVDFIPPLDFK- 185
E LR ++ LT + ++ YNNK Y + V+E K PS A+SIIETD VDF PPLD K
Sbjct: 148 ENALRKFATLTKAEDFVIEYNNKNYTLRVLEIKPVNPSNAISIIETDISVDFAPPLDSKP 207
Query: 186 -EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPF 244
E KP ++ + T K PP K P+ S S+ KF F
Sbjct: 208 EETYKPQTTGFTFGTTSVAKLIPPGSSKKPQNDSDEEESSDE----------DEPKFKAF 257
Query: 245 TGSGRCLNGKSSTQPTVSPSSPLIDNPQ 272
G+ L+GKS T P+ P + L +P+
Sbjct: 258 GGTAARLDGKSGT-PSTPPKNMLGTSPK 284
>gi|330933598|ref|XP_003304234.1| hypothetical protein PTT_16730 [Pyrenophora teres f. teres 0-1]
gi|311319317|gb|EFQ87691.1| hypothetical protein PTT_16730 [Pyrenophora teres f. teres 0-1]
Length = 357
Score = 207 bits (526), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 99/192 (51%), Positives = 133/192 (69%), Gaps = 7/192 (3%)
Query: 10 FERKYRCYPISFIDKPHLE---NGDKIVMPPSALDRLAYLHIEYPMLFELSNTSA-GRVT 65
F+ +RCYPI + P E +G K+ +PPSALD+L LHI YPMLFEL N G+ T
Sbjct: 29 FDEYFRCYPIVMLPGPEREEANHGGKVFLPPSALDKLTRLHITYPMLFELINGKEDGKKT 88
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+ GV+EFIA+EG IYLP+W+ME + L+ GD+++VK+ + G+++KLQP FLDIS+P
Sbjct: 89 HAGVLEFIAEEGKIYLPHWLMETLKLEPGDLLQVKSTDIPLGTFIKLQPQDSSFLDISDP 148
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETK---PSTAVSIIETDCEVDFIPPL 182
KAVLE R++SCLTTGD YN+ Y I V+ETK PS AV IETD VDF PP+
Sbjct: 149 KAVLENAFRNFSCLTTGDIFTFSYNDNVYSIAVLETKPEHPSKAVCTIETDLSVDFAPPV 208
Query: 183 DFKEPEKPSSSS 194
++EP++ S +S
Sbjct: 209 GYQEPQRTSGTS 220
>gi|189189186|ref|XP_001930932.1| ubiquitin fusion degradation protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187972538|gb|EDU40037.1| ubiquitin fusion degradation protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 357
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 99/192 (51%), Positives = 133/192 (69%), Gaps = 7/192 (3%)
Query: 10 FERKYRCYPISFIDKPHLE---NGDKIVMPPSALDRLAYLHIEYPMLFELSNTSA-GRVT 65
F+ +RCYPI + P E +G K+ +PPSALD+L LHI YPMLFEL N G+ T
Sbjct: 29 FDEYFRCYPIVMLPGPEREEANHGGKVFLPPSALDKLTRLHITYPMLFELINGKEDGKKT 88
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+ GV+EFIA+EG IYLP+W+ME + L+ GD+++VK+ + G+++KLQP FLDIS+P
Sbjct: 89 HAGVLEFIAEEGKIYLPHWLMETLKLEPGDLLQVKSTDIPLGTFIKLQPQDSSFLDISDP 148
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETK---PSTAVSIIETDCEVDFIPPL 182
KAVLE R++SCLTTGD YN+ Y I V+ETK PS AV IETD VDF PP+
Sbjct: 149 KAVLENAFRNFSCLTTGDIFTFSYNDNVYSIAVLETKPEHPSKAVCTIETDLSVDFAPPV 208
Query: 183 DFKEPEKPSSSS 194
++EP++ S +S
Sbjct: 209 GYQEPQRTSGTS 220
>gi|355737765|gb|AES12423.1| ubiquitin fusion degradation 1-like protein [Mustela putorius furo]
Length = 179
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 92/155 (59%), Positives = 124/155 (80%)
Query: 35 MPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEG 94
MPPSALD+L+ L+I YPMLF+L+N ++ R+T+CGV+EF+ADEG+ YLP+WMM+N+LL+EG
Sbjct: 1 MPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEG 60
Query: 95 DIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKY 154
+V+V++ +L +Y K QP + DFLDI+NPKAVLE LR+++CLTTGD I + YN K Y
Sbjct: 61 GLVQVESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIY 120
Query: 155 YINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEK 189
+ V+ETKP AVSIIE D VDF PL +KEPE+
Sbjct: 121 ELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPER 155
>gi|428183156|gb|EKX52015.1| UFD1-like protein, CDC48 co-factor [Guillardia theta CCMP2712]
Length = 228
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 98/187 (52%), Positives = 136/187 (72%), Gaps = 5/187 (2%)
Query: 8 AAFERKYRCYPISFIDKPH---LENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRV 64
A F ++Y P++ DK LE G KI++PPSAL +L+ L I YPMLFE++N + GR
Sbjct: 32 ANFSQRYHAIPVAAADKSDTSKLEAGGKIMLPPSALQQLSLLEIAYPMLFEITNRANGRK 91
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
+CGV+EFIA+EG + +P+WMM+N+ + GD+V V++A+L KG YVKL+P +K FLDI+N
Sbjct: 92 LHCGVLEFIANEGSVLMPHWMMQNLGVDHGDLVTVESATLPKGQYVKLRPQSKTFLDIAN 151
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKP--STAVSIIETDCEVDFIPPL 182
PKAVLE TLRS+S LT G TI + YNNK+Y I+VV+ KP + A+SI++ D VDF P
Sbjct: 152 PKAVLENTLRSFSALTKGSTIRIHYNNKQYDIDVVDIKPRDTGAISIVDADVNVDFDAPA 211
Query: 183 DFKEPEK 189
D+ EP +
Sbjct: 212 DYVEPVR 218
>gi|194748120|ref|XP_001956497.1| GF24568 [Drosophila ananassae]
gi|190623779|gb|EDV39303.1| GF24568 [Drosophila ananassae]
Length = 317
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 129/180 (71%), Gaps = 3/180 (1%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F Y+C+ +S + ++ +E G KI+MP SALD L L++EYPMLF+L N R ++
Sbjct: 17 FTAAYKCFSVSMLPGNERSDVEKGGKIIMPNSALDTLTRLNVEYPMLFKLINGKKSRSSH 76
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EF+ADEG YLPYWMM+N+LL+EGDI+ +++ SL ++ K QPH+ DFLDI+NPK
Sbjct: 77 AGVLEFVADEGKCYLPYWMMDNLLLEEGDILNIESVSLPVATFSKFQPHSTDFLDITNPK 136
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
AVLE LR+++CLT GD I + YN K Y + V+ETKP AVSIIE D V+F P+ +K+
Sbjct: 137 AVLENALRNFACLTKGDVIAIKYNKKVYELCVLETKPGNAVSIIECDMNVEFEAPVGYKD 196
>gi|239946413|gb|ACS36234.1| ubiquitin fusion degradation protein [Guillardia theta]
Length = 249
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/187 (52%), Positives = 136/187 (72%), Gaps = 5/187 (2%)
Query: 8 AAFERKYRCYPISFIDKPH---LENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRV 64
A F ++Y P++ DK LE G KI++PPSAL +L+ L I YPMLFE++N + GR
Sbjct: 32 ANFSQRYHAIPVAAADKSDTSKLEAGGKIMLPPSALQQLSLLEIAYPMLFEITNRANGRK 91
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
+CGV+EFIA+EG + +P+WMM+N+ + GD+V V++A+L KG YVKL+P +K FLDI+N
Sbjct: 92 LHCGVLEFIANEGSVLMPHWMMQNLGVDHGDLVTVESATLPKGQYVKLRPQSKTFLDIAN 151
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKP--STAVSIIETDCEVDFIPPL 182
PKAVLE TLRS+S LT G TI + YNNK+Y I+VV+ KP + A+SI++ D VDF P
Sbjct: 152 PKAVLENTLRSFSALTKGSTIRIHYNNKQYDIDVVDIKPRDTGAISIVDADVNVDFDAPA 211
Query: 183 DFKEPEK 189
D+ EP +
Sbjct: 212 DYVEPVR 218
>gi|407916528|gb|EKG09896.1| Ubiquitin fusion degradation protein UFD1 [Macrophomina phaseolina
MS6]
Length = 369
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 134/194 (69%), Gaps = 9/194 (4%)
Query: 10 FERKYRCYPISFIDKPHLE---NGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ +RCYP++ + P E +G K +PPSALD+L LHI YPMLFEL+N + G+ T+
Sbjct: 30 FDEYFRCYPVAMMPGPEREEANHGGKAFLPPSALDKLTRLHITYPMLFELTNGTDGKRTH 89
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EF A+EG IYLPYW+M+ + L+ GD+V+VK+ L G+++KLQP + FLDIS+PK
Sbjct: 90 AGVLEFTAEEGKIYLPYWLMQTLSLEPGDLVQVKSTDLPLGNFIKLQPQSPAFLDISDPK 149
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKP---STAVSIIETDCEVDFIPPLD 183
AVLE R++SCLT GD YN++ Y I V+E KP S A+ +ETD VDF PP+
Sbjct: 150 AVLEQAFRNFSCLTVGDIFTFAYNDQVYSIKVLEVKPDKESHAICTLETDLSVDFAPPVG 209
Query: 184 FKEPEK---PSSSS 194
++EP + PS +S
Sbjct: 210 YEEPPRAVPPSGTS 223
>gi|380013827|ref|XP_003690947.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin fusion degradation
protein 1 homolog [Apis florea]
Length = 294
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 125/339 (36%), Positives = 181/339 (53%), Gaps = 68/339 (20%)
Query: 10 FERKYRCYPISFID---KPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F YRC+ +S + + +E G KI+MPPSAL+ L L+I +PMLF+LSN R+T+
Sbjct: 14 FNNHYRCFSVSMLPGTYRRDVERGGKIIMPPSALEHLTRLNIRFPMLFKLSNEKTNRITH 73
Query: 67 CGVMEFIADEGLIYLPYW-MMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
CGV+EF+ADEG +YLP W MM N+LLQEGD++ V++ +L ++ + QP ++DFLDI+NP
Sbjct: 74 CGVLEFVADEGRVYLPCWXMMYNLLLQEGDLINVESVNLPVATFSRFQPQSEDFLDITNP 133
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD I + YN + Y + V+ET+P AV+IIE D V+F PPL +
Sbjct: 134 KAVLENGLRNFACLTTGDIIAIKYNQRIYEMCVLETRPGPAVTIIECDMNVEFAPPLGYV 193
Query: 186 EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFT 245
E E K+E +D P ++ P + F PF
Sbjct: 194 EKETK-------------KDENVVD----------------PADLMPAP----SGFVPFK 220
Query: 246 GSGRCLNGKSS---TQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNA 302
G G L+GK +P V+ + P GI K G L F
Sbjct: 221 GEGNRLDGKKRRDFAKPEVTTNKPA-------YVRGI-------PDYDYKIGTLTFLRII 266
Query: 303 NQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
+N + +++ +F+AFTG+ +SLR
Sbjct: 267 KPVNN--------------KEAKDQDEFKAFTGEGFSLR 291
>gi|125979821|ref|XP_001353943.1| GA19461 [Drosophila pseudoobscura pseudoobscura]
gi|54640928|gb|EAL29679.1| GA19461 [Drosophila pseudoobscura pseudoobscura]
Length = 313
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 109/248 (43%), Positives = 151/248 (60%), Gaps = 19/248 (7%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F Y+CY +S + ++ +E G KI+MPPSALD L L++EYPMLF+LSN R ++
Sbjct: 17 FHATYKCYSVSMLPGNERSDVEKGGKIIMPPSALDTLTRLNVEYPMLFKLSNNKKMRSSH 76
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EF+ADEG YLP+WMM N+LL+EG+I+ +++ SL ++ K QP++ DFLDI+NPK
Sbjct: 77 AGVLEFVADEGKCYLPHWMMHNLLLEEGNILIIESVSLPVATFSKFQPNSTDFLDITNPK 136
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
AVLE LR+++CLT GD I + YN K Y + V+ET+P AVSIIE D V+F P+ +KE
Sbjct: 137 AVLENALRNFACLTKGDVIAIKYNKKIYELCVLETRPGNAVSIIECDMNVEFEAPVGYKE 196
Query: 187 PEK---PSSSSLSNR--------TLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPP 235
+ P S + L EE FKGP L + E + E P
Sbjct: 197 HHETQIPGSGQQGTQGTGASDASALGAALEEVVETFKGP----GVRLDGKKKKESQLETP 252
Query: 236 KKIAKFSP 243
+ KF P
Sbjct: 253 -VVKKFLP 259
>gi|453083566|gb|EMF11611.1| UFD1-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 367
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 131/191 (68%), Gaps = 6/191 (3%)
Query: 10 FERKYRCYPISFIDKPHLE---NGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYPI+ + P E +G KI +P SALD+L LHIEYPMLFEL N + ++
Sbjct: 28 FDEYYRCYPIAMMPGPERESANHGGKIFLPASALDKLTQLHIEYPMLFELINGTKSTSSH 87
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EF A+EG YLP+WMM+ + L+ GD+++ K+ SL G ++KLQP T +FLDIS+PK
Sbjct: 88 AGVLEFTAEEGRCYLPFWMMQTLALEPGDLIQTKSTSLPPGRFIKLQPQTTNFLDISDPK 147
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPS---TAVSIIETDCEVDFIPPLD 183
AVLE R ++C++ GD YN+ Y I V+E KP +A+S+ ETD EVDF PP+
Sbjct: 148 AVLEQAFRGFACMSKGDIFTFSYNDTVYEIAVLEVKPEGEKSAISVQETDLEVDFAPPIG 207
Query: 184 FKEPEKPSSSS 194
++EP++ +S+
Sbjct: 208 YEEPKRSGTST 218
>gi|344241479|gb|EGV97582.1| Protein HIRA [Cricetulus griseus]
Length = 1007
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 108/262 (41%), Positives = 154/262 (58%), Gaps = 45/262 (17%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRC+ S + D+ +E G K + L+I YPMLF+L+N ++ R+T
Sbjct: 14 FSTQYRCFSASMLAGPNDRSDVEKGGK-----------SRLNITYPMLFKLTNKNSDRMT 62
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 63 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 122
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 123 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 182
Query: 186 EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFT 245
EPE+P V+ E ++ + + + F F+
Sbjct: 183 EPERP------------VQHEESIEGEADHSGYTGEVG-----------------FRAFS 213
Query: 246 GSGRCLNG-KSSTQPTVSPSSP 266
GSG L+G K +P+ SP P
Sbjct: 214 GSGNRLDGKKKGVEPSPSPIKP 235
>gi|320165244|gb|EFW42143.1| ubiquitin fusion degradaton protein [Capsaspora owczarzaki ATCC
30864]
Length = 368
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 113/273 (41%), Positives = 160/273 (58%), Gaps = 28/273 (10%)
Query: 8 AAFERKYRCYPISFIDK------PHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNT-- 59
A F +RC+P++ + LE G KI++PPSALDRL L+I YPMLFE+S
Sbjct: 10 ARFSDNFRCFPVAMLAAKSVSMTQELETGGKIILPPSALDRLTRLNISYPMLFEISEYDE 69
Query: 60 ----------SAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSY 109
+ G+VT+ GV+EFIA+ G +Y+PYW+M N+ + EG +V +++A+L SY
Sbjct: 70 VLSRDHPDAPAVGKVTHAGVLEFIAEPGRVYMPYWLMTNLGISEGSLVRIRSATLDPCSY 129
Query: 110 VKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSI 169
K Q +F++ISNPKAVLE TLR ++CLT GDTI + YNNK Y + V + KP +AVSI
Sbjct: 130 TKFQWQDAEFMEISNPKAVLEKTLRKFACLTLGDTIAMHYNNKIYELRVTDLKPKSAVSI 189
Query: 170 IETDCEVDFIPPLDFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPE 229
IE D +VDF P + EP+ + S+ + +V E L S S + +T
Sbjct: 190 IECDMQVDFEAPPHYVEPDYKAQSAAAK----QVAENQVLQ----RASLSQSPAGQTMLS 241
Query: 230 VKEEPPKKIAKFSPFTGSGRCLNGKSSTQPTVS 262
+ EE + A+F F+GSG L+GK P S
Sbjct: 242 LPEE--EFSARFKAFSGSGARLDGKQRNSPLSS 272
>gi|361128685|gb|EHL00615.1| putative Ubiquitin fusion degradation protein 1 [Glarea lozoyensis
74030]
Length = 392
Score = 204 bits (518), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 96/193 (49%), Positives = 129/193 (66%), Gaps = 6/193 (3%)
Query: 10 FERKYRCYPISFIDKPHLEN---GDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYP + P+ +N G KI+MPPSAL++L LHI YPMLFEL N GR T+
Sbjct: 37 FDEYYRCYPTVMLPGPNRDNLNYGGKIIMPPSALEKLTRLHITYPMLFELLNGQEGRHTH 96
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EFIA EG +Y+P WMM+ + L +GD++++K+ LA ++VKLQP K+FLDIS+PK
Sbjct: 97 AGVLEFIAAEGRVYIPRWMMKTLKLDDGDMIQIKSTDLAPATFVKLQPQNKNFLDISDPK 156
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIPPLD 183
AVLE R ++ +T GD YN+ Y I V+ETKP + VS++ETD EVDF PP+
Sbjct: 157 AVLEKAFRDFATVTKGDIFSFTYNDTVYDIAVIETKPKSDKMGVSMLETDVEVDFAPPVG 216
Query: 184 FKEPEKPSSSSLS 196
+ EP S S
Sbjct: 217 YVEPTSTRGSGTS 229
>gi|156102162|ref|XP_001616774.1| ubiquitin fusion degradation protein [Plasmodium vivax Sal-1]
gi|148805648|gb|EDL47047.1| ubiquitin fusion degradation protein, putative [Plasmodium vivax]
Length = 317
Score = 204 bits (518), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 92/177 (51%), Positives = 132/177 (74%)
Query: 10 FERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGV 69
F +Y CYP+SFI K +ENG+KI++P +AL+ LA HI +PMLFE+SN + T+ GV
Sbjct: 58 FTEEYTCYPVSFIGKDDMENGNKIILPQTALNALARRHISWPMLFEVSNPYTEKRTHSGV 117
Query: 70 MEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVL 129
+EFI+DEG ++PYWMM+ + L+EGDIV V + SL KG++VKL+P + DF+++SN +AVL
Sbjct: 118 LEFISDEGTCHMPYWMMQQLCLKEGDIVRVTSVSLPKGTFVKLKPCSTDFMELSNHRAVL 177
Query: 130 ETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
ET LR+Y+ LT GD I++ Y Y I +V+ KP+ A +IIETD EV+F P+D+K+
Sbjct: 178 ETALRNYATLTIGDNIVIHYLGNTYEIKIVDLKPAFACTIIETDVEVEFEEPVDYKQ 234
>gi|67516095|ref|XP_657933.1| hypothetical protein AN0329.2 [Aspergillus nidulans FGSC A4]
gi|40746579|gb|EAA65735.1| hypothetical protein AN0329.2 [Aspergillus nidulans FGSC A4]
gi|259489438|tpe|CBF89710.1| TPA: ubiquitin fusion degradation protein Ufd1, putative
(AFU_orthologue; AFUA_1G02430) [Aspergillus nidulans
FGSC A4]
Length = 393
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 88/175 (50%), Positives = 131/175 (74%), Gaps = 3/175 (1%)
Query: 23 DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLP 82
++ ++ +G K++MPPSALD+L LHI YPMLFEL N + ++++ GV+EFIA+EG IYLP
Sbjct: 5 ERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNGAKEKMSHAGVLEFIAEEGKIYLP 64
Query: 83 YWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTG 142
YW+M+ +LL+ GD+V++K+ L G ++KLQ + FLDIS+PKAVLE R++SCLT
Sbjct: 65 YWLMQTLLLEPGDLVQIKSTDLPPGRFIKLQAQSTSFLDISDPKAVLENAFRNFSCLTKD 124
Query: 143 DTIMVPYNNKKYYINVVETKP---STAVSIIETDCEVDFIPPLDFKEPEKPSSSS 194
D YN++ Y + V+ETKP + A+S++ETD EVDF PP+ ++EP++PS +S
Sbjct: 125 DVFTFAYNDQVYEMAVLETKPANDTNAISVLETDLEVDFAPPVGYEEPQRPSGTS 179
>gi|351715455|gb|EHB18374.1| Ubiquitin fusion degradation protein 1-like protein [Heterocephalus
glaber]
Length = 296
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 108/262 (41%), Positives = 154/262 (58%), Gaps = 45/262 (17%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRC+ +S + D+ +E G K + L+I YPMLF+L+N ++ R+T
Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGK-----------SRLNITYPMLFKLTNKNSDRMT 67
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 68 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 127
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +K
Sbjct: 128 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 187
Query: 186 EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFT 245
EPE+ +V+ E + + + L F F+
Sbjct: 188 EPER------------QVQHEESTENEADHSGYAGELG-----------------FRAFS 218
Query: 246 GSGRCLNG-KSSTQPTVSPSSP 266
GSG L+G K +P+ SP P
Sbjct: 219 GSGNRLDGKKKGVEPSPSPIKP 240
>gi|213409447|ref|XP_002175494.1| ubiquitin fusion degradation protein [Schizosaccharomyces japonicus
yFS275]
gi|212003541|gb|EEB09201.1| ubiquitin fusion degradation protein [Schizosaccharomyces japonicus
yFS275]
Length = 335
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 89/207 (42%), Positives = 140/207 (67%), Gaps = 6/207 (2%)
Query: 1 AYENHHDAAFERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELS 57
A+ ++ + F+ YRCYP + + ++P+L G K+++PPSAL++L+ L+I YPMLFE
Sbjct: 8 AFASNANLTFDTYYRCYPTAMLPGEERPNLNYGGKVILPPSALEKLSRLNISYPMLFEFQ 67
Query: 58 NTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTK 117
N G+ T+ GV+EFIADEG +YLP+WMM + +Q GD++ V N + +GS+VKLQP +
Sbjct: 68 NKQTGQRTHGGVLEFIADEGRVYLPHWMMSTLGVQPGDLIRVINTDIQQGSFVKLQPQSS 127
Query: 118 DFLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTA---VSIIETDC 174
+FLDI+N +AVLE+ LR +S LT GD I + YN++ Y + V+E KP +S++ETD
Sbjct: 128 NFLDITNHRAVLESALRDFSTLTQGDVIEILYNDQVYKLAVLEVKPEDGRGVISVVETDL 187
Query: 175 EVDFIPPLDFKEPEKPSSSSLSNRTLP 201
VDF PP+ +++ + ++ +P
Sbjct: 188 VVDFAPPVGYEQEMQRKQQEMAKSKVP 214
>gi|307178216|gb|EFN67001.1| Ubiquitin fusion degradation protein 1-like protein [Camponotus
floridanus]
Length = 281
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/183 (53%), Positives = 139/183 (75%), Gaps = 3/183 (1%)
Query: 10 FERKYRCYPISFID---KPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F +Y+C+ +S + + +E G KI+MPPSAL++L L+I YPMLF+L+N R+T+
Sbjct: 9 FNTQYKCFSVSMLPGTYRQDVERGGKIIMPPSALEQLTRLNIIYPMLFKLTNKKTNRITH 68
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
CGV+EFIADEG +YLPYWMM N+LL+EG+++ V++ SL ++ + QP ++DFLDI+NPK
Sbjct: 69 CGVLEFIADEGKVYLPYWMMHNLLLEEGELLNVESVSLPIATFSRFQPQSEDFLDITNPK 128
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
AVLE LRS++CLTTGD I + YN K Y + V+ET+P +AVSIIE D V+F PP+ +KE
Sbjct: 129 AVLENGLRSFACLTTGDLIAIKYNQKIYEMCVLETRPGSAVSIIECDMNVEFAPPVGYKE 188
Query: 187 PEK 189
P++
Sbjct: 189 PKR 191
>gi|307178215|gb|EFN67000.1| Ubiquitin fusion degradation protein 1-like protein [Camponotus
floridanus]
Length = 287
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/183 (53%), Positives = 139/183 (75%), Gaps = 3/183 (1%)
Query: 10 FERKYRCYPISFID---KPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F +Y+C+ +S + + +E G KI+MPPSAL++L L+I YPMLF+L+N R+T+
Sbjct: 15 FNTQYKCFSVSMLPGTYRQDVERGGKIIMPPSALEQLTRLNIIYPMLFKLTNKKTNRITH 74
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
CGV+EFIADEG +YLPYWMM N+LL+EG+++ V++ SL ++ + QP ++DFLDI+NPK
Sbjct: 75 CGVLEFIADEGKVYLPYWMMHNLLLEEGELLNVESVSLPIATFSRFQPQSEDFLDITNPK 134
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
AVLE LRS++CLTTGD I + YN K Y + V+ET+P +AVSIIE D V+F PP+ +KE
Sbjct: 135 AVLENGLRSFACLTTGDLIAIKYNQKIYEMCVLETRPGSAVSIIECDMNVEFAPPVGYKE 194
Query: 187 PEK 189
P++
Sbjct: 195 PKR 197
>gi|225678983|gb|EEH17267.1| ubiquitin fusion degradation protein [Paracoccidioides brasiliensis
Pb03]
Length = 362
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 129/339 (38%), Positives = 181/339 (53%), Gaps = 45/339 (13%)
Query: 23 DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLP 82
++ ++ +G K++MPPSALD+L LHI YPMLFE++N R+T+ GV+EFIA+EG IYLP
Sbjct: 6 ERENVNHGGKVIMPPSALDKLTRLHITYPMLFEINNGQRDRMTHAGVLEFIAEEGKIYLP 65
Query: 83 YWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTG 142
+W+M+ +LL+ GD V+VK+ L G Y+KLQ + FLDIS+PKAVLE R++SCLT G
Sbjct: 66 FWLMQTLLLEPGDFVQVKSTDLPPGRYIKLQAQSTSFLDISDPKAVLENAFRNFSCLTKG 125
Query: 143 DTIMVPYNNKKYYINVVETKPS---TAVSIIETDCEVDFIPPLDFKEPEKPSSS----SL 195
D YN++ Y + V+ETKP A+S++ETD EVDF P+ ++EP++ S + S
Sbjct: 126 DIFTFSYNDQIYEMAVLETKPQHSKNAISVLETDLEVDFATPVGYEEPKRSSGASTPQSA 185
Query: 196 SNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTGSGRCLNGKS 255
R LP L G S + + PE + A FS F G+ LN K
Sbjct: 186 GARGLPAGGV---LHSHGTMAQSINYAA--IAPESTDAAKGAKAVFSNFLLGGQRLNAKK 240
Query: 256 STQ----------PTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNANQS 305
++ +SP++P + P Q + R GKL FG N
Sbjct: 241 GSKGQTPKASTPVDAISPNAPQLPLPNQRT--------KAPQPLRLPPGKLFFGYALN-- 290
Query: 306 SNGTPKVLPKSSSGEPPQVEEK--PKFQAFTGKKYSLRG 342
P +VEE PKFQ G +LRG
Sbjct: 291 --------PVHKRDAKDKVEEDGGPKFQ---GVGQTLRG 318
>gi|226287987|gb|EEH43500.1| ubiquitin fusion degradation protein [Paracoccidioides brasiliensis
Pb18]
Length = 362
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 129/339 (38%), Positives = 181/339 (53%), Gaps = 45/339 (13%)
Query: 23 DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLP 82
++ ++ +G K++MPPSALD+L LHI YPMLFE++N R+T+ GV+EFIA+EG IYLP
Sbjct: 6 ERENVNHGGKVIMPPSALDKLTRLHITYPMLFEINNGQRDRMTHAGVLEFIAEEGKIYLP 65
Query: 83 YWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTG 142
+W+M+ +LL+ GD V+VK+ L G Y+KLQ + FLDIS+PKAVLE R++SCLT G
Sbjct: 66 FWLMQTLLLEPGDFVQVKSTDLPPGRYIKLQAQSTSFLDISDPKAVLENAFRNFSCLTKG 125
Query: 143 DTIMVPYNNKKYYINVVETKPS---TAVSIIETDCEVDFIPPLDFKEPEKPSSS----SL 195
D YN++ Y + V+ETKP A+S++ETD EVDF P+ ++EP++ S + S
Sbjct: 126 DIFTFSYNDQIYEMAVLETKPQHSKNAISVLETDLEVDFATPVGYEEPKRSSGASTPQSA 185
Query: 196 SNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTGSGRCLNGKS 255
R LP L G S + + PE + A FS F G+ LN K
Sbjct: 186 GARGLPAGGV---LHSHGTMAQSINYAA--IAPESTDAAKGAKAVFSNFLLGGQRLNAKK 240
Query: 256 STQ----------PTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNANQS 305
++ +SP++P + P Q + R GKL FG N
Sbjct: 241 GSKGQTPKASTPVDAISPNAPQLPLPNQRT--------KAPQPLRLPPGKLFFGYALN-- 290
Query: 306 SNGTPKVLPKSSSGEPPQVEEK--PKFQAFTGKKYSLRG 342
P +VEE PKFQ G +LRG
Sbjct: 291 --------PVHKRDAKDKVEEDGGPKFQ---GVGQTLRG 318
>gi|332020651|gb|EGI61057.1| Ubiquitin fusion degradation protein 1-like protein [Acromyrmex
echinatior]
Length = 293
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 124/335 (37%), Positives = 181/335 (54%), Gaps = 60/335 (17%)
Query: 10 FERKYRCYPISFID---KPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F +Y+C+ +S + + +E G KI+MPPSAL++L L+I YPMLF+L+N R+T+
Sbjct: 9 FNTQYKCFSVSMLPGTYRQDVERGGKIIMPPSALEQLTRLNIIYPMLFKLTNKKTNRITH 68
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
CGV+EFIADEG +YLPYWMM N+LL+EG+++ V++ SL ++ + QP ++DFLDI+NPK
Sbjct: 69 CGVLEFIADEGKVYLPYWMMHNLLLEEGELLNVESVSLPVATFSRFQPQSEDFLDITNPK 128
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
AVLE LRS++CLTTGD I + YN K Y + V+ET+P AVSIIE D V+F PP+ +KE
Sbjct: 129 AVLENGLRSFACLTTGDVIAIKYNQKIYEMCVLETRPGPAVSIIECDMNVEFAPPVGYKE 188
Query: 187 P-EKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFT 245
P KP E+ + L++ P + F PF
Sbjct: 189 PVRKPKK----------------------EEDETEHLADLMPAQ---------TGFVPFQ 217
Query: 246 GSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNANQS 305
G G L+GK D P+Q + + G L F N
Sbjct: 218 GEGVRLDGKKRK-----------DMPKQETVSTKPTYVRGIPDYDYQIGTLRFLRNIKPV 266
Query: 306 SNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSL 340
+N + ++ +F+AFTG+ ++L
Sbjct: 267 NNK--------------ETKDPDEFKAFTGEGFTL 287
>gi|449300954|gb|EMC96965.1| hypothetical protein BAUCODRAFT_32710 [Baudoinia compniacensis UAMH
10762]
Length = 373
Score = 200 bits (509), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 91/197 (46%), Positives = 132/197 (67%), Gaps = 6/197 (3%)
Query: 10 FERKYRCYPISFIDKPHLE---NGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYP++ + P + +G KI +P SALD+L LHI YPMLFEL+N + T+
Sbjct: 29 FDEYYRCYPVAMMPGPERDAANHGGKIFLPASALDKLTQLHITYPMLFELNNGIKSKSTH 88
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EF A+EG YLPYW+M+ +LL+ GD+++ K+ L G ++KLQP +FL+IS+PK
Sbjct: 89 AGVLEFTAEEGRCYLPYWLMQTLLLEPGDLLQTKSTDLPPGQFIKLQPQNVNFLEISDPK 148
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPS---TAVSIIETDCEVDFIPPLD 183
AVLET R++SCLT GD YN+ + I V+E KP A+S+ ETD EVDF P+
Sbjct: 149 AVLETAFRNFSCLTVGDIFTFSYNDTTFEIAVLEVKPEGEKKAISVQETDLEVDFAAPVG 208
Query: 184 FKEPEKPSSSSLSNRTL 200
++EP +S + + R++
Sbjct: 209 YQEPTAKTSGTSTPRSI 225
>gi|440634826|gb|ELR04745.1| hypothetical protein GMDG_06973 [Geomyces destructans 20631-21]
Length = 397
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 115/276 (41%), Positives = 151/276 (54%), Gaps = 28/276 (10%)
Query: 10 FERKYRCYPISFIDKP---HLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYP + P +L G KI+MPPSALD+L LHI YPMLFEL N T+
Sbjct: 32 FDEYYRCYPTVMMSGPSRDYLNYGGKIIMPPSALDKLTRLHITYPMLFELINKPKKAQTH 91
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EF+A+EG +YLP WMM + L+ GD++++K+ +LA VKLQP + FLDIS+PK
Sbjct: 92 AGVLEFVAEEGKVYLPQWMMNTLHLEVGDLIQIKSTNLADAKLVKLQPQSPTFLDISDPK 151
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIPPLD 183
AVLE R++S LT GD YN+ Y + V+E KP + VS+IETD EVDF P+
Sbjct: 152 AVLENAFRNFSTLTKGDIFSFHYNDTVYDVAVLEVKPESDKMGVSMIETDVEVDFAAPVG 211
Query: 184 FKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNR-----------TPPEVKE 232
+ EPE+ S S P KG P+ L N+ P
Sbjct: 212 YVEPERTKGSGTST----------PHSTKGGSLPAGGLLHNQGTMAQSINYDAISPNSTA 261
Query: 233 EPPKKIAKFSPFTGSGRCLNGKSSTQ-PTVSPSSPL 267
A S F SG+ LN K + PT PS+P+
Sbjct: 262 ATSGAKAVSSNFLLSGQKLNAKKGGKAPTPKPSTPV 297
>gi|239613550|gb|EEQ90537.1| ubiquitin fusion degradation protein Ufd1 [Ajellomyces dermatitidis
ER-3]
Length = 366
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 87/175 (49%), Positives = 127/175 (72%), Gaps = 3/175 (1%)
Query: 23 DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLP 82
++ ++ +G K++MPPSALD+L LHI YPMLFEL N R T+ GV+EFIA+EG IYLP
Sbjct: 6 ERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNRVRDRTTHAGVLEFIAEEGKIYLP 65
Query: 83 YWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTG 142
+W+M+ +LL+ GD++++K+ L G Y+KLQ + FLDIS+PKAVLE R++SCL+ G
Sbjct: 66 FWIMQTLLLEPGDLLQIKSTDLPPGQYIKLQAQSTSFLDISDPKAVLENAFRNFSCLSKG 125
Query: 143 DTIMVPYNNKKYYINVVETKPS---TAVSIIETDCEVDFIPPLDFKEPEKPSSSS 194
D YN + Y + V+ETKP +A+S++ETD EVDF P+ ++EP++ S +S
Sbjct: 126 DIFTFSYNEQIYEMAVLETKPQHSKSAISVLETDLEVDFATPIGYEEPKRVSGTS 180
>gi|452841545|gb|EME43482.1| hypothetical protein DOTSEDRAFT_154014 [Dothistroma septosporum
NZE10]
Length = 370
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 92/192 (47%), Positives = 130/192 (67%), Gaps = 7/192 (3%)
Query: 10 FERKYRCYPISFIDKPHLE---NGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYPI+ + P + +G KI +P SALD+L LHI YPMLFEL N + G+ T+
Sbjct: 28 FDEYYRCYPIAMMPGPERDAANHGGKIFLPASALDKLTQLHITYPMLFELVNGARGKSTH 87
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EF A+EG YLP+W M + L+ GD+++ K+ L G ++KLQP +FLDIS+PK
Sbjct: 88 AGVLEFTAEEGRCYLPFWTMTVLGLEPGDLLQTKSTDLPPGQFIKLQPQNVNFLDISDPK 147
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST----AVSIIETDCEVDFIPPL 182
AVLET R++SCL+ GD YN+ Y I V+E KP+ ++S+ ETD EVDF PP+
Sbjct: 148 AVLETAFRNFSCLSLGDVFTFSYNDTVYEIAVLEVKPNIEGKHSISVQETDLEVDFAPPV 207
Query: 183 DFKEPEKPSSSS 194
++EP++ S +S
Sbjct: 208 GYQEPQRNSGTS 219
>gi|440796369|gb|ELR17478.1| Ubiquitin fusion degradation protein 1, putative [Acanthamoeba
castellanii str. Neff]
Length = 284
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 134/335 (40%), Positives = 177/335 (52%), Gaps = 64/335 (19%)
Query: 21 FIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIY 80
+ K LENG K L+IEYPMLFELS S GRVT+CGV+EF+ADEGL Y
Sbjct: 1 MMGKEKLENGGK-----------TRLNIEYPMLFELSG-SQGRVTHCGVLEFVADEGLCY 48
Query: 81 LPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLT 140
LP+WMM+ +LL EG ++ VK+A+L KG+Y KLQP + FLD++NPKAVLE LR++S LT
Sbjct: 49 LPHWMMQQLLLTEGQLINVKSATLPKGTYTKLQPVDETFLDLTNPKAVLENALRNWSALT 108
Query: 141 TGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIPPLD-FKEPEKPSSSSLS 196
GD I++ YN K Y INV+E KP T A+SIIE D VDF P D K+ E+ L
Sbjct: 109 AGDVIIINYNKKNYEINVLEVKPDTPSHAISIIEADVMVDFAPSEDQLKKAEQARRQQLE 168
Query: 197 NRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTGSGRCLNGKSS 256
+ + KG K + P E + E PK F GSG L+G+S
Sbjct: 169 KAAVSSI--------KGKGKATEKEAPGAKPAEPEPEVPK-----PSFPGSGFRLDGRSI 215
Query: 257 TQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNANQSSNGTPKVLPKS 316
T+P +A S +K G LVFG+ ++ + K +
Sbjct: 216 TKP--------------------------AADSTRKPGGLVFGAGNTAAAAASAKANAPA 249
Query: 317 SSGE---------PPQVEEKPKFQAFTGKKYSLRG 342
+S + P +E+ KF F+G YSLRG
Sbjct: 250 ASKDQGKKKEEEKKPAPQEEKKFVPFSGAGYSLRG 284
>gi|391346786|ref|XP_003747649.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog
[Metaseiulus occidentalis]
Length = 300
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/249 (40%), Positives = 148/249 (59%), Gaps = 32/249 (12%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F +YR + +S + ++ +LE G+K+++PPS LD L+ L+I YP+LF++ N R T+
Sbjct: 14 FTAEYRAFSVSMLCGNERQNLEQGNKVILPPSTLDMLSRLNITYPILFKVENRRLKRDTH 73
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
CGV+EF ADEG YLPYWMM+ + L EGD + V+N L G++ K Q + DFLDI+NPK
Sbjct: 74 CGVLEFSADEGKCYLPYWMMKYLCLDEGDHLYVENTQLPVGNFAKFQAQSVDFLDITNPK 133
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
AVLE +LR ++CLT DTI++ YN+K+Y + V+ET+P A+ I E D V+F P+ ++E
Sbjct: 134 AVLENSLRHFACLTANDTIVIKYNDKQYELCVLETRPGPAIDIHECDLNVEFAAPVGYQE 193
Query: 187 PEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTG 246
PE S + +DFK PE + + F F G
Sbjct: 194 PETKKVS------------QEEIDFKKPEVIVDTKKA-----------------FQAFAG 224
Query: 247 SGRCLNGKS 255
SG ++GK+
Sbjct: 225 SGNRIDGKA 233
>gi|19113572|ref|NP_596780.1| Cdc48-Ufd1-Npl4 complex component Ufd1 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|59800404|sp|O42915.4|UFD1_SCHPO RecName: Full=Ubiquitin fusion degradation protein 1; Short=UB
fusion protein 1
gi|3123677|emb|CAA06721.1| Ufd1 protein [Schizosaccharomyces pombe]
gi|3123696|emb|CAA06722.1| Ufd1 protein [Schizosaccharomyces pombe]
gi|6179676|emb|CAB59876.1| Cdc48-Ufd1-Npl4 complex component Ufd1 (predicted)
[Schizosaccharomyces pombe]
Length = 342
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 138/192 (71%), Gaps = 6/192 (3%)
Query: 1 AYENHHDAAFERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELS 57
A+ N+ + F+ +YRCYP++ I ++P++ G K+++PPSAL++L+ L++ YPMLF+
Sbjct: 23 AFHNNVNQRFDTRYRCYPVAMIPGEERPNVNYGGKVILPPSALEKLSRLNVSYPMLFDFE 82
Query: 58 NTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTK 117
N +A + T+ GV+EFIA+EG +YLPYWMM + L+ GD+V V N +A+GSYVKLQP +
Sbjct: 83 NEAAEKKTHGGVLEFIAEEGRVYLPYWMMTTLSLEPGDLVRVINTDIAQGSYVKLQPQSV 142
Query: 118 DFLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTA---VSIIETDC 174
+FLDI++ +AVLE LR++S LT D + YN++ Y I V++ +P + VS++ETD
Sbjct: 143 NFLDITDHRAVLENALRNFSTLTKSDIFEILYNDQVYQIKVIDVQPDDSRHVVSVVETDL 202
Query: 175 EVDFIPPLDFKE 186
VDF PP+ ++E
Sbjct: 203 VVDFDPPIGYEE 214
>gi|296422279|ref|XP_002840689.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636910|emb|CAZ84880.1| unnamed protein product [Tuber melanosporum]
Length = 367
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 90/187 (48%), Positives = 131/187 (70%), Gaps = 7/187 (3%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ RCYPI + ++ L G K++MPPSALD+L+ LHI YPMLFEL N S +VT+
Sbjct: 12 FDEFLRCYPIVMMSGAERAELNFGGKVIMPPSALDKLSRLHIAYPMLFELRNGSKDKVTH 71
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFL-DISNP 125
GV+EFIA+EG +YLP+WMM+ +LL+ G+++++K+ L G+++KLQP + F+ I++P
Sbjct: 72 AGVLEFIAEEGRVYLPHWMMKTLLLEPGELLQIKSTDLLAGTFIKLQPQSTAFITSITDP 131
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIPPL 182
KAVLE LR++S LT GD YN++ + I V+E KP T A++ IETD VDF PP+
Sbjct: 132 KAVLENALRTFSALTVGDVFSFFYNDQVFDIAVLEVKPETKMKAITTIETDISVDFAPPV 191
Query: 183 DFKEPEK 189
+ EP +
Sbjct: 192 GYVEPSR 198
>gi|167521720|ref|XP_001745198.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776156|gb|EDQ89776.1| predicted protein [Monosiga brevicollis MX1]
Length = 235
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 129/189 (68%), Gaps = 6/189 (3%)
Query: 7 DAAFERKYRCYPISFIDKPHLENGD---KIVMPPSALDRLAYLHIEYPMLFELSNTSAGR 63
+ A++RK+RC+ I + E+ D KI +PP AL+ LA +++YPM+F+L N S G+
Sbjct: 11 NMAWQRKFRCHSIMMLQGAAREDADTGGKIFLPPDALEDLASRNVQYPMMFKLRNDSIGK 70
Query: 64 VTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDIS 123
T+ GV+EF A G +Y+P WMM N+LLQE +I+ V+N S+ +Y K QP + DFLDIS
Sbjct: 71 ETHAGVLEFTATPGHVYMPGWMMRNLLLQEDEIITVQNLSMVTCTYAKFQPQSPDFLDIS 130
Query: 124 NPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIP 180
NPKAVLE TLR +SCLT D I + YNNK Y I V+E KP AVSI+E D +++F
Sbjct: 131 NPKAVLENTLRKFSCLTVNDIIAINYNNKVYEIEVLEVKPENSDQAVSIVECDMQLEFAA 190
Query: 181 PLDFKEPEK 189
P+ +KEPE+
Sbjct: 191 PIGYKEPER 199
>gi|342881879|gb|EGU82664.1| hypothetical protein FOXB_06816 [Fusarium oxysporum Fo5176]
Length = 380
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 118/341 (34%), Positives = 181/341 (53%), Gaps = 32/341 (9%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYP+ ++P L G KI++PPSALD+++ LH+++P+L EL N GR ++
Sbjct: 32 FDEYYRCYPLVMAPGAERPELNYGSKIILPPSALDKVSKLHVQWPLLMELINGEKGRHSH 91
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EFIA+EG Y+P WMME + + GD+++V+ SL VKLQP + +FL+IS+PK
Sbjct: 92 AGVLEFIAEEGRAYIPQWMMETLGMDVGDMIQVRTTSLELAKMVKLQPQSVNFLEISDPK 151
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIPPLD 183
AVLE R+++ LT GD YN++ Y + V++ KP T VS+IETD V+F PP+
Sbjct: 152 AVLEKAFRNFATLTKGDVFNFAYNDEVYDVAVLDVKPETDKMGVSMIETDVSVEFAPPVG 211
Query: 184 FKEPEKPSSSSLSNRTLPEVKEEPPLDFKG--PEKPSSSSLSNRTPPEVKEEPPKKIAKF 241
+ EPE+ S +S T V L +G + + S+++ P +
Sbjct: 212 YVEPERKSGTSTPRSTRGGVPAGGLLHNQGTMAQAINYSAIA-----------PSVTSNV 260
Query: 242 SPFTGSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSN 301
+ F G G+ L K S PT P++P+ P + A+ R KL FG
Sbjct: 261 TNFLGEGQKLAKKGSKAPTPKPATPV---PTVEIPGMPRRRDGAPAALRLPPNKLFFGY- 316
Query: 302 ANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
++ P + + Q +E F G+ +LRG
Sbjct: 317 ---------EIKPVKTDADKEQEKENANRPHFAGQGQTLRG 348
>gi|290998001|ref|XP_002681569.1| ubiquitin fusion degradation protein domain-containing protein
[Naegleria gruberi]
gi|284095194|gb|EFC48825.1| ubiquitin fusion degradation protein domain-containing protein
[Naegleria gruberi]
Length = 346
Score = 197 bits (500), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 87/187 (46%), Positives = 132/187 (70%), Gaps = 4/187 (2%)
Query: 2 YENHHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSA 61
++ F+R YR Y +F KP ++ G KI++P SALD LA L+I YPMLF++SN+
Sbjct: 6 FQGQRIDVFKRPYRVYTGAFCGKPQIDEGGKIILPSSALDELARLNIVYPMLFKISNSKK 65
Query: 62 GRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLD 121
+ T+CGV+EF A+EG Y+P+WM E + L G +V V++ +L KG++VK++P K F++
Sbjct: 66 KKATHCGVLEFSAEEGRAYIPFWMQEYLQLSPGSLVNVESVALPKGTFVKIRPQQKAFIE 125
Query: 122 ISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST----AVSIIETDCEVD 177
IS+PKAVLE LR++SCL+ GDTI++ YNNK+++I++V ++ AVSI+ETD +V+
Sbjct: 126 ISDPKAVLEKQLRNFSCLSRGDTIIIAYNNKQFFIDIVAVASASGDCEAVSIVETDVKVE 185
Query: 178 FIPPLDF 184
F P D
Sbjct: 186 FERPADM 192
>gi|261194445|ref|XP_002623627.1| ubiquitin fusion degradation protein Ufd1 [Ajellomyces dermatitidis
SLH14081]
gi|239588165|gb|EEQ70808.1| ubiquitin fusion degradation protein Ufd1 [Ajellomyces dermatitidis
SLH14081]
Length = 299
Score = 197 bits (500), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 86/175 (49%), Positives = 127/175 (72%), Gaps = 3/175 (1%)
Query: 23 DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLP 82
++ ++ +G K++MPPSALD+L LHI YPM+FEL N R T+ GV+EFIA+EG IYLP
Sbjct: 6 ERENVNHGGKVIMPPSALDKLTRLHITYPMIFELHNRVKDRTTHAGVLEFIAEEGKIYLP 65
Query: 83 YWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTG 142
+W+M+ +LL+ GD++++K+ L G Y+KLQ + FLDIS+PKAVLE R++SCL+ G
Sbjct: 66 FWIMQTLLLEPGDLLQIKSTDLPPGQYIKLQAQSTSFLDISDPKAVLENAFRNFSCLSKG 125
Query: 143 DTIMVPYNNKKYYINVVETKPS---TAVSIIETDCEVDFIPPLDFKEPEKPSSSS 194
D YN + Y + V+ETKP +A+S++ETD EVDF P+ ++EP++ S +S
Sbjct: 126 DIFTFSYNEQIYEMAVLETKPQHSKSAISVLETDLEVDFATPIGYEEPKRVSGTS 180
>gi|403332413|gb|EJY65225.1| Ubiquitin fusion degradaton protein, putative [Oxytricha trifallax]
Length = 262
Score = 197 bits (500), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 86/178 (48%), Positives = 121/178 (67%)
Query: 9 AFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCG 68
F R Y+ Y +F K + G+KI++P SAL LA L I YPM+F +SN + TYCG
Sbjct: 28 VFLRSYKAYSPAFFGKNDINKGNKIILPSSALHELARLSISYPMIFMISNPQMAKKTYCG 87
Query: 69 VMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAV 128
V+EF A+EGL YLPYWMM N+ L+EG + ++N +L KG++V +QPH F+D++NPKA+
Sbjct: 88 VLEFSAEEGLCYLPYWMMNNLFLEEGSEIILRNVTLRKGNFVTIQPHETAFIDLANPKAI 147
Query: 129 LETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
LE L +YSCL GDTI + Y K + I++V+ KP + ++E D EV+F PLD+KE
Sbjct: 148 LEQELTNYSCLMKGDTININYQGKDFLIDIVDCKPDDQICVVEADIEVEFKAPLDYKE 205
>gi|302652396|ref|XP_003018049.1| hypothetical protein TRV_07937 [Trichophyton verrucosum HKI 0517]
gi|291181652|gb|EFE37404.1| hypothetical protein TRV_07937 [Trichophyton verrucosum HKI 0517]
Length = 362
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/199 (47%), Positives = 129/199 (64%), Gaps = 20/199 (10%)
Query: 2 YENHHDAAFERKYRCYPISFIDKPHLEN---GDKIVMPPSALDRLAYLHIEYPMLFELSN 58
+ H F+ YRCYP++ + P EN G K++MPPSALD+L LHI YPMLFEL N
Sbjct: 4 HSTHSSRRFDEYYRCYPVAMLPGPERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHN 63
Query: 59 TSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKD 118
+ ++T+ GV+EFIA+EG IYLP+W +K+ L GS +KLQ +
Sbjct: 64 GAKQQMTHAGVLEFIAEEGKIYLPFW--------------IKSTDLPPGSKIKLQAQSTS 109
Query: 119 FLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCE 175
FLDIS+PKAVLE R++SCLT GD YN++ Y + V+ETKP T A+S++ETD E
Sbjct: 110 FLDISDPKAVLENAFRNFSCLTKGDIFTFSYNDQIYEMAVLETKPETSQNAISVLETDLE 169
Query: 176 VDFIPPLDFKEPEKPSSSS 194
VDF PP+ ++EP++ S +S
Sbjct: 170 VDFAPPVGYEEPKRLSGTS 188
>gi|302915499|ref|XP_003051560.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732499|gb|EEU45847.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 388
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 183/347 (52%), Gaps = 36/347 (10%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYP+ ++P L G KI++PPSALD+++ LH+++P+L EL N G+ ++
Sbjct: 32 FDEYYRCYPLIMAPGAERPELNYGSKIILPPSALDKVSKLHVQWPLLMELINGEKGKHSH 91
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EFIA+EG Y+P WMME + + GD+++++ SL VKLQP + FL+IS+PK
Sbjct: 92 AGVLEFIAEEGRAYIPQWMMETLGMDVGDMIQIRTTSLELAKMVKLQPQSVSFLEISDPK 151
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIPPLD 183
AVLE R+++ LT GD YN++ Y + V++ KP T VS+IETD V+F PP+
Sbjct: 152 AVLEKAFRNFATLTKGDVFNFSYNDEVYEVAVLDVKPETDKMGVSMIETDVSVEFAPPVG 211
Query: 184 FKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNR----TPPEVKEEPPKKIA 239
+ EPE+ S +S T P +G P+ L ++ P +
Sbjct: 212 YVEPERQSGTSTPRST------STPRSTRGGGVPAGGLLHSQGTMAQAINYSAMAPSVTS 265
Query: 240 KFSPFTGSGRCLNGKSSTQPTVSPSSPL---IDNPQQNAANGINGSKSSS-ASSRQKSGK 295
+ F G G+ L K S PT P++P+ +D P G+ + + A+ R K
Sbjct: 266 NITNFLGEGQKLAKKGSKNPTPKPATPVPASVDIP------GLPKRRDGAPAALRLPPNK 319
Query: 296 LVFGSNANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
L FG ++ P + + Q +E F G+ +LRG
Sbjct: 320 LFFGY----------EIKPVKTEADKEQEKENANRPHFAGQGQTLRG 356
>gi|169611855|ref|XP_001799345.1| hypothetical protein SNOG_09042 [Phaeosphaeria nodorum SN15]
gi|160702380|gb|EAT83234.2| hypothetical protein SNOG_09042 [Phaeosphaeria nodorum SN15]
Length = 352
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 133/200 (66%), Gaps = 15/200 (7%)
Query: 10 FERKYRCYPISFIDKPHLE---NGDKIVMPPSALDRLAYLHIEYPMLFELSNTSA-GRVT 65
F+ +RCYPI + P E +G K+ +PPSALD+L LHI YPMLFEL N G+ T
Sbjct: 16 FDEYFRCYPIVMLPGPEREEANHGGKVFLPPSALDKLTRLHITYPMLFELINGKEDGKTT 75
Query: 66 YCGVMEFIADEGLIYLPYW--------MMENMLLQEGDIVEVKNASLAKGSYVKLQPHTK 117
+ GV+EFIA+EG IYLPYW +M+ + L+ GD+++VK+ +L G+++KLQP
Sbjct: 76 HAGVLEFIAEEGKIYLPYWPPSTDASQLMQTLKLEPGDLLQVKSTNLPLGTFIKLQPQDP 135
Query: 118 DFLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKP---STAVSIIETDC 174
FL+IS+PKAVLE R++SCLT GD YN+ + I V+ETKP S A+ +ETD
Sbjct: 136 SFLEISDPKAVLENAFRNFSCLTQGDIFTFAYNDDVFSIAVLETKPEHASKAICTLETDL 195
Query: 175 EVDFIPPLDFKEPEKPSSSS 194
VDF PP+ ++EP++ S +S
Sbjct: 196 SVDFAPPIGYQEPQRTSGTS 215
>gi|389585783|dbj|GAB68513.1| ubiquitin fusion degradation protein, partial [Plasmodium cynomolgi
strain B]
Length = 295
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 131/185 (70%), Gaps = 10/185 (5%)
Query: 10 FERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGV 69
F +Y CYP+SFI K +ENG+KI++P +AL+ LA HI +PMLFE+SN + T+ GV
Sbjct: 45 FTEEYTCYPVSFIGKDDMENGNKIILPQTALNALARRHISWPMLFEVSNPYTEKRTHSGV 104
Query: 70 MEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAV- 128
+EFI+DEG ++PYWMM+ + L+EGDIV V + SL KG++VKL+P + DF+++SN +AV
Sbjct: 105 LEFISDEGTCHMPYWMMQQLCLKEGDIVRVTSVSLPKGTFVKLKPCSTDFMELSNHRAVY 164
Query: 129 ---------LETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFI 179
LET LR+Y+ LT GD I++ Y K Y I +V+ KP+ A +IIETD EV+F
Sbjct: 165 SYMGSGLRGLETALRNYATLTIGDNIVIHYLGKTYEIKIVDLKPAFACTIIETDVEVEFE 224
Query: 180 PPLDF 184
P+D+
Sbjct: 225 EPVDY 229
>gi|310794576|gb|EFQ30037.1| ubiquitin fusion degradation protein UFD1 [Glomerella graminicola
M1.001]
Length = 373
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 118/339 (34%), Positives = 179/339 (52%), Gaps = 22/339 (6%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYP+ ++P L G KI +PPSALD+++ LH+++P+L E+ N G+ ++
Sbjct: 16 FDEYYRCYPMVMAPGPERPDLNYGSKIFLPPSALDKVSKLHVQWPLLMEIINGEKGKHSH 75
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EF+A+EG YLP+WMM+ + L GD++++K SL VKLQP + +FLDIS+PK
Sbjct: 76 AGVLEFVAEEGRAYLPHWMMQTLSLDVGDMIQIKTTSLELAKLVKLQPQSTNFLDISDPK 135
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIPPLD 183
AVLE R+++ LT GD YN++ Y++ V+E KP T V +IETD EVDF P+
Sbjct: 136 AVLEKAFRNFAALTKGDVFNFEYNDEIYHVAVLEVKPETEKMGVCMIETDVEVDFAAPVG 195
Query: 184 FKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSP 243
+ EPEK S ++ T V+ P G S S++ P S
Sbjct: 196 YVEPEKQQRGSGTS-TPRSVRGGLP---AGGLLHSQGSMAQSI--NYSAIAPSATTNISR 249
Query: 244 FTGSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNAN 303
F G G+ L+ K S T P++P+ AA + + R KL FG
Sbjct: 250 FYGEGQKLSKKGSKTSTPKPATPVAGASANTAAVPLPRRTNGPMPLRLPPNKLFFGY--- 306
Query: 304 QSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
++ P + + + +E+ F G+ +LRG
Sbjct: 307 -------EIKPVKTDADKEREKEEANRPHFAGQGQTLRG 338
>gi|406863163|gb|EKD16211.1| ubiquitin fusion degradation protein Ufd1 [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 395
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/267 (40%), Positives = 156/267 (58%), Gaps = 11/267 (4%)
Query: 10 FERKYRCYPISFIDKPHLEN---GDKIVMPPSALDRLAYLHIEYPMLFELSNTSAG-RVT 65
F+ YRCYP + P E G KI+MP SALD+L LHI YPMLFEL+N G R T
Sbjct: 33 FDEYYRCYPTVMLPGPEREELNYGGKIIMPASALDKLTRLHITYPMLFELTNGLKGDRTT 92
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EFIA+EG +YLP+WMM+ +L++ GD++++++ LA ++K+Q +FL++S+P
Sbjct: 93 HCGVLEFIAEEGKVYLPHWMMQTLLVETGDLIQIRSTDLAPARFIKVQAQDVNFLEVSDP 152
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIPPL 182
KAVLE R+++ +T GD YN++ Y + V+E KP + AV +IETD EVDF PL
Sbjct: 153 KAVLERAFRNFATMTKGDVFSFKYNDETYDMAVLEVKPESGKGAVCVIETDVEVDFAAPL 212
Query: 183 DFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLS-NRTPPEVKEEPPKKIAKF 241
+ EP+ S S T V P + + S++ + P A
Sbjct: 213 GYVEPQPTRGSGTS--TPKSVAGLPAGGMMHSQGTMAQSINYDAIAPSSNAAVLGAKAVS 270
Query: 242 SPFTGSGRCLNG-KSSTQPTVSPSSPL 267
S F G+ LN KSS PT PS+P+
Sbjct: 271 SNFLLGGQKLNAKKSSKNPTPKPSTPV 297
>gi|260942687|ref|XP_002615642.1| hypothetical protein CLUG_04524 [Clavispora lusitaniae ATCC 42720]
gi|238850932|gb|EEQ40396.1| hypothetical protein CLUG_04524 [Clavispora lusitaniae ATCC 42720]
Length = 380
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 92/186 (49%), Positives = 125/186 (67%), Gaps = 7/186 (3%)
Query: 10 FERKYRCYPISF----IDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
FE +RCYP++ + K G KI +PPSAL+RL LHI YPMLFEL+N + T
Sbjct: 47 FEDYFRCYPVAMMPDNVRKDDANYGGKIFLPPSALNRLTMLHIRYPMLFELTNEALNVRT 106
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+ GV+EF+A+EG +Y+P WMME + LQ G +V++ N L G +VK++P + DFLDIS+P
Sbjct: 107 HSGVLEFVAEEGRVYIPQWMMETLKLQPGSLVKIANCDLPNGRFVKIEPQSVDFLDISDP 166
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETK---PSTAVSIIETDCEVDFIPPL 182
KAVLE TLR +S LT D I YN+ KY I V+E K P+ ++ ++ETD E DF PP+
Sbjct: 167 KAVLENTLRKFSTLTVDDVIENDYNDTKYGIRVLEVKPENPNRSICVVETDLETDFAPPV 226
Query: 183 DFKEPE 188
+ EPE
Sbjct: 227 GYVEPE 232
>gi|242052119|ref|XP_002455205.1| hypothetical protein SORBIDRAFT_03g006250 [Sorghum bicolor]
gi|241927180|gb|EES00325.1| hypothetical protein SORBIDRAFT_03g006250 [Sorghum bicolor]
Length = 287
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 87/187 (46%), Positives = 130/187 (69%), Gaps = 1/187 (0%)
Query: 2 YENHHDAAFERKYRCYPISFIDKPHL-ENGDKIVMPPSALDRLAYLHIEYPMLFELSNTS 60
Y N F + YRC P+S + K + E+G++++MP SALDRL L+ +YPMLF++ N S
Sbjct: 6 YLNLQSRTFVQYYRCLPLSLLKKENADEDGNRVIMPLSALDRLERLNAQYPMLFQIKNPS 65
Query: 61 AGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFL 120
RVT+CGV F A+EG I++P W+M ++ + E +IV V++ SL +++KLQPHTKDFL
Sbjct: 66 TERVTHCGVSVFSANEGFIHMPSWLMTHLGVVENEIVLVRSTSLPTATFIKLQPHTKDFL 125
Query: 121 DISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIP 180
++S P+ +LE R + C+T G+TI V + YY++V+E +P+ AV ++TDC VDF P
Sbjct: 126 NVSYPRELLEYNFRKFPCVTAGETIAVTEGERWYYLDVLEAQPADAVCSLDTDCAVDFAP 185
Query: 181 PLDFKEP 187
PLD+ EP
Sbjct: 186 PLDYVEP 192
>gi|429862703|gb|ELA37339.1| ubiquitin fusion degradation protein [Colletotrichum
gloeosporioides Nara gc5]
Length = 356
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 90/191 (47%), Positives = 127/191 (66%), Gaps = 6/191 (3%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYP+ ++P L G KI +PPSALD+++ LH+++P+L E+ N G+ ++
Sbjct: 3 FDEYYRCYPMVMAPGAERPELNYGSKIFLPPSALDKVSKLHVQWPLLMEIINGEKGKHSH 62
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EF+A+EG YLP WMME + L GD+++VK SL VKLQP + +FLDIS+PK
Sbjct: 63 SGVLEFVAEEGRAYLPQWMMETLQLDVGDMIQVKTTSLELARLVKLQPQSTNFLDISDPK 122
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIPPLD 183
AVLE R+++ LT GD YN++ Y++ V+E KP T V +IETD EVDF PP+
Sbjct: 123 AVLEKAFRNFATLTKGDIFNFEYNDEIYHVAVLEVKPETDKMGVCMIETDVEVDFAPPVG 182
Query: 184 FKEPEKPSSSS 194
+ EPEK S
Sbjct: 183 YVEPEKQQRGS 193
>gi|367012423|ref|XP_003680712.1| hypothetical protein TDEL_0C06120 [Torulaspora delbrueckii]
gi|359748371|emb|CCE91501.1| hypothetical protein TDEL_0C06120 [Torulaspora delbrueckii]
Length = 356
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 125/339 (36%), Positives = 177/339 (52%), Gaps = 36/339 (10%)
Query: 10 FERKYRCYPISF----IDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
FE +RCYP++ I K G KI +P SAL++L L+I YPMLFEL+ GRVT
Sbjct: 19 FEDFFRCYPVAMMNDRIRKDDANYGGKIFLPTSALNKLTMLNIRYPMLFELTANENGRVT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EFIA+EG YLP WM+E + +Q G ++++ + + G +VKL+P + DFLDIS+P
Sbjct: 79 HCGVLEFIAEEGRAYLPQWMLETLGVQPGSLLKIGSTDVPLGQFVKLEPQSVDFLDISDP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETK---PSTAVSIIETDCEVDFIPPL 182
KAVLE LR +S LT D I + YN K Y I ++E K PS + +IETD +F PP+
Sbjct: 139 KAVLENVLRKFSTLTIEDIIEISYNEKTYKIKILEVKPESPSKGICVIETDLVTEFAPPV 198
Query: 183 DFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFS 242
+ EP+ + + K E D + + S++ R K + A +
Sbjct: 199 GYVEPDYQALQQKELEEKQKKKREGKFDLSAHQ---NGSMARRIDYVAKLKETN--AGTT 253
Query: 243 PFTGSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNA 302
F+G G+ L+GKS+ + + S + Q +G A G+L F
Sbjct: 254 AFSGEGQTLSGKSNKKNGDTDLSKI-----QITLDG------EPARLSLPDGQLFF---- 298
Query: 303 NQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
G P VLPK+S E E AF GK SLR
Sbjct: 299 -----GFPIVLPKTSEDEEASSAE----NAFKGKGQSLR 328
>gi|294935400|ref|XP_002781413.1| Ubiquitin fusion degradation protein, putative [Perkinsus marinus
ATCC 50983]
gi|239892016|gb|EER13208.1| Ubiquitin fusion degradation protein, putative [Perkinsus marinus
ATCC 50983]
Length = 245
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 87/144 (60%), Positives = 114/144 (79%)
Query: 30 GDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENM 89
G+KI++P SALD+LA L++ YPMLF++SN R T+CGV+EF A+EG Y+PYWMM+N+
Sbjct: 1 GNKILLPQSALDQLARLNVSYPMLFQISNLKEPRTTHCGVLEFTAEEGFCYIPYWMMQNL 60
Query: 90 LLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDTIMVPY 149
+LQEGD+V VKN SL KG VKLQP TKDFL+I NP+A+LE +LR+++ LT GD I + Y
Sbjct: 61 VLQEGDLVRVKNVSLPKGRSVKLQPVTKDFLEIHNPRAILENSLRNFAALTAGDNIAIQY 120
Query: 150 NNKKYYINVVETKPSTAVSIIETD 173
NNK + I VVE KP+ A+SIIE D
Sbjct: 121 NNKTFEIEVVECKPANAISIIEAD 144
>gi|448118340|ref|XP_004203471.1| Piso0_001080 [Millerozyma farinosa CBS 7064]
gi|448120748|ref|XP_004204054.1| Piso0_001080 [Millerozyma farinosa CBS 7064]
gi|359384339|emb|CCE79043.1| Piso0_001080 [Millerozyma farinosa CBS 7064]
gi|359384922|emb|CCE78457.1| Piso0_001080 [Millerozyma farinosa CBS 7064]
Length = 353
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 112/264 (42%), Positives = 150/264 (56%), Gaps = 27/264 (10%)
Query: 7 DAAFERKYRCYPISF----IDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAG 62
D FE +R YPI+ I K G KI +PPSAL++L LHI YPMLFEL N
Sbjct: 19 DNKFEDYFRSYPITMMPDEIRKDDANYGGKIFLPPSALNKLTMLHIRYPMLFELENEGCD 78
Query: 63 RVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDI 122
++T+ GV+EF+A+EG YLP WMM + L G I+++ N L G +VK++P + DFLDI
Sbjct: 79 KLTHSGVLEFVAEEGRAYLPQWMMNTLDLTPGSILKIANCDLPLGKFVKIEPQSVDFLDI 138
Query: 123 SNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKP---STAVSIIETDCEVDFI 179
++ KAVLE LR +S LT GD I + YN+ Y I V+E KP S + ++ETD E DF
Sbjct: 139 TDHKAVLENVLRKFSTLTIGDIIEINYNDSTYAIKVLEVKPESESKGICVVETDLETDFA 198
Query: 180 PPLDFKEPE-KPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKI 238
PP+ + EPE KP S S+R P KPSS + S K+ K+
Sbjct: 199 PPVGYVEPEYKPQSKEPSSR---------------PIKPSSVNKSAGAGSMAKKLEYAKL 243
Query: 239 ----AKFSPFTGSGRCLNGKSSTQ 258
+ S F G G+ L+GKS T+
Sbjct: 244 VGEASTSSTFKGEGQSLSGKSKTE 267
>gi|340374671|ref|XP_003385861.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog
[Amphimedon queenslandica]
Length = 324
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 87/183 (47%), Positives = 128/183 (69%), Gaps = 2/183 (1%)
Query: 8 AAFERKYRCYPISFID--KPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F ++CY + + K ++G KI++PPSAL+RLA L+I YPMLF L+N R T
Sbjct: 23 GTFCDNFKCYSMVYFSSAKVDADHGGKIILPPSALERLARLNITYPMLFRLTNDMINRHT 82
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF A+EG +Y+P WM+ +++ + G +++++N +L ++ K QP + DFLDISNP
Sbjct: 83 HCGVLEFSAEEGRVYVPKWMLGHLMAEAGHLLKIENVTLPLATFSKFQPQSVDFLDISNP 142
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KAVLE LR ++CLT GD I + YN K Y + V+ET+P+ AVSIIE D +VDF P+ +K
Sbjct: 143 KAVLELKLRLFACLTKGDVIQINYNEKNYELLVLETQPNNAVSIIECDMKVDFAAPVGYK 202
Query: 186 EPE 188
EP+
Sbjct: 203 EPQ 205
>gi|401625649|gb|EJS43647.1| ufd1p [Saccharomyces arboricola H-6]
Length = 363
Score = 194 bits (492), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 128/343 (37%), Positives = 178/343 (51%), Gaps = 39/343 (11%)
Query: 10 FERKYRCYPISF----IDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
FE +RCYPI I K G KI +PPSAL RL+ L+I YPMLF+LS +GRVT
Sbjct: 21 FEEFFRCYPIVMMNDRIRKDDANFGGKIFLPPSALSRLSMLNIRYPMLFKLSANESGRVT 80
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+ GV+EFIA+EG +YLP WMME + +Q G ++++ +A + G +VKL+P + DFLDIS+P
Sbjct: 81 HGGVLEFIAEEGRVYLPQWMMETLGIQPGSLLQISSADVPLGQFVKLEPQSVDFLDISDP 140
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKP---STAVSIIETDCEVDFIPPL 182
KAVLE LR++S LT D I + YN K + I ++E KP S ++ +IETD DF P+
Sbjct: 141 KAVLENVLRNFSTLTVDDIIEISYNGKTFKIKILEVKPESSSKSICVIETDLVTDFAAPV 200
Query: 183 DFKEPEKPSSSSLSNRTLPEVKEEPPLDFKG----PEKPSSSSLSNRTPPEVKEEPPKKI 238
+ EP+ ++ + + KE+ KG P S+S R K
Sbjct: 201 GYVEPDYKAAKAQQD------KEKKGASGKGQVLDPSVLEQGSMSTRIDYTGTANSIK-- 252
Query: 239 AKFSPFTGSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVF 298
+K S F G G+ ++GK+ P + +G A G+L F
Sbjct: 253 SKQSNFIGEGQNISGKA---PRKDKDLKKDVKEMKVTFDG------EPAKLDLPEGQLFF 303
Query: 299 GSNANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
G P VLPK + G KP Q F G+ SLR
Sbjct: 304 ---------GFPIVLPKDNEGSDSVA--KPNEQNFQGQGISLR 335
>gi|322705273|gb|EFY96860.1| ubiquitin fusion degradation protein 1 [Metarhizium anisopliae
ARSEF 23]
Length = 378
Score = 194 bits (492), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 118/339 (34%), Positives = 175/339 (51%), Gaps = 30/339 (8%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYP+ ++P L G KI++PPSALD+++ LH+++P+L E+ N GR ++
Sbjct: 32 FDEYYRCYPVVMAPGAERPELNYGSKIILPPSALDKVSKLHVQWPLLMEMINGEKGRHSH 91
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EFIA+EG Y+P WMME + + GD+++++ SL VKLQP + +FL+IS+PK
Sbjct: 92 AGVLEFIAEEGRAYIPQWMMETLGMDVGDMIQIRTTSLELAKMVKLQPQSVNFLEISDPK 151
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIPPLD 183
AVLE R+++ LT GD YN++ Y + V++ KP T VS+IETD V+F PP+
Sbjct: 152 AVLERAFRNFATLTKGDVFNFEYNDEIYEVAVLDVKPETDKMGVSMIETDVSVEFAPPVG 211
Query: 184 FKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSP 243
+ EPE+ S ++ T V + +G + S P V P +
Sbjct: 212 YVEPERRSGTNTPGSTRSGVPTGGLVQSQGTMAQAIGYGS--IAPSVTSNP-------TN 262
Query: 244 FTGSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNAN 303
F G G+ L K S T P++P+ P + + A R KL FG
Sbjct: 263 FVGEGQRLTKKGSKTSTPKPATPVPAEPTAPKSR-----TGAPAPLRLAPNKLFFGYEYK 317
Query: 304 QSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
P + E Q E K F G+ SLRG
Sbjct: 318 ----------PLKTKEEKEQEHEDAKRPHFAGQGQSLRG 346
>gi|328768466|gb|EGF78512.1| hypothetical protein BATDEDRAFT_4457, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 182
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 93/179 (51%), Positives = 127/179 (70%), Gaps = 4/179 (2%)
Query: 14 YRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVM 70
YRC+ I+ + DK G K+ MPPSAL +L+ LHIEYPM+FE+ N S T+ GV+
Sbjct: 4 YRCFSIAMLPGNDKKSANYGGKVFMPPSALAKLSSLHIEYPMIFEIKNNSLPNKTHAGVL 63
Query: 71 EFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLE 130
EFIA+EG +Y+P WMM+ +LLQEG +V++++ SL G +VK+QP + FLDI++PKAVLE
Sbjct: 64 EFIAEEGRVYIPNWMMQTLLLQEGQLVQMRSTSLPLGKFVKIQPQSVAFLDITDPKAVLE 123
Query: 131 TTLRSYSCLTTGDTIMVPYNNKKYYINVVETKP-STAVSIIETDCEVDFIPPLDFKEPE 188
RS++ LT GD I + YN+K Y I ++ETKP +SIIETD EVDF PL + +PE
Sbjct: 124 QAFRSFTTLTQGDIISINYNDKLYDILLMETKPDGNGISIIETDLEVDFAAPLGYVDPE 182
>gi|312075778|ref|XP_003140568.1| ubiquitin fusion degradation protein UFD1 containing protein [Loa
loa]
gi|307764267|gb|EFO23501.1| ubiquitin fusion degradation protein UFD1 containing protein [Loa
loa]
Length = 321
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 111/258 (43%), Positives = 148/258 (57%), Gaps = 30/258 (11%)
Query: 10 FERKYRCYPISFIDKP------HLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTS-AG 62
F+ + RC+ +F + L +G KI++PPSALD L L+IEYPM+F + N S +G
Sbjct: 17 FDLQLRCFSAAFYEGADTKKINELNHGGKILLPPSALDLLVRLNIEYPMMFRVQNLSDSG 76
Query: 63 RVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDI 122
T+CGV+EF+A+EG YLP WMM + L EG+ V + A+L K +Y KL+P + DFL I
Sbjct: 77 YSTHCGVLEFLAEEGRCYLPSWMMRQLHLNEGECVRITYATLPKATYTKLKPQSTDFLAI 136
Query: 123 SNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPL 182
SNP+AVLE LR ++CLT GD I V YN++ V+E KP AVSIIE D V+F P
Sbjct: 137 SNPRAVLEVELRKFACLTKGDIIAVEYNDQILEFLVMEVKPGRAVSIIECDMNVEFDAPE 196
Query: 183 DFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFS 242
+ EP ++SS SN T PS SS P V E K + F
Sbjct: 197 GYVEPNTNAASS-SNAT-----------------PSMSS-----TPVVNETGIKAGSGFK 233
Query: 243 PFTGSGRCLNGKSSTQPT 260
FTG+G L+GK + T
Sbjct: 234 AFTGTGHRLDGKLKSSTT 251
>gi|452982562|gb|EME82321.1| hypothetical protein MYCFIDRAFT_197475 [Pseudocercospora fijiensis
CIRAD86]
Length = 365
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 128/353 (36%), Positives = 185/353 (52%), Gaps = 40/353 (11%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYPI+ + ++P +G K+ +P SALD+L LHI YPMLFE+ + T+
Sbjct: 28 FDEYYRCYPIAMMPGPERPAANHGGKMFLPASALDKLTQLHITYPMLFEIGTKD--KNTH 85
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EF A+EG +YLPYW+M + L+ GD+++ K+ L G+++KLQP +FLDI++PK
Sbjct: 86 AGVLEFTAEEGRVYLPYWIMTVLGLEPGDLIQCKSTDLPPGNFIKLQPQDVNFLDITDPK 145
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPS---TAVSIIETDCEVDFIPPLD 183
AVLE R++SCLT GD YNN Y I V+E KP A+S+ ETD EVDF P+
Sbjct: 146 AVLEQAFRNFSCLTQGDVFTFEYNNTVYEIAVLEVKPQGDKKAISVQETDLEVDFAAPVG 205
Query: 184 FKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLS-----NRTPPEVKEEPPKKI 238
++EP K S +S + R++ + + KG S S++ N P+
Sbjct: 206 YQEPVKGSGTS-TPRSVGSM-----MAGKGGLMHSEGSMAQAINYNSIKPDSDAAAKGHA 259
Query: 239 AKFSPFTGSGRCLNGKSSTQPTVSPSSPLIDN---PQQNAANGINGSKSSSASS------ 289
S F+G+G+ L K +P+S N P Q + I G + +
Sbjct: 260 KAASAFSGAGQRLVAKKGKGAAATPASTPGTNTPIPGQGGSVNIPGLAPKTKTRMNGPQP 319
Query: 290 -RQKSGKLVFGSNANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
R GKL FG ++ P S E EE K Q F+G+ SLR
Sbjct: 320 LRLPPGKLFFGY----------EIKPLKSK-EQQAEEEASKKQNFSGEGQSLR 361
>gi|255724222|ref|XP_002547040.1| ubiquitin fusion degradation protein 1 [Candida tropicalis
MYA-3404]
gi|240134931|gb|EER34485.1| ubiquitin fusion degradation protein 1 [Candida tropicalis
MYA-3404]
Length = 362
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 111/257 (43%), Positives = 149/257 (57%), Gaps = 25/257 (9%)
Query: 10 FERKYRCYPIS----FIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
FE +RCYP+S I K G KI +PPSAL++L LHI YPMLFEL N ++T
Sbjct: 21 FEEYFRCYPVSMMPELIRKDDANYGGKIFLPPSALNKLTMLHIRYPMLFELKNEQNDKLT 80
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+ GV+EFIA+EG YLP WMM + L G ++++ N L+ G +VK++P + DFLDIS+P
Sbjct: 81 HSGVLEFIAEEGRTYLPQWMMSTLQLSPGSLIKITNCDLSLGKFVKIEPQSVDFLDISDP 140
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKP---STAVSIIETDCEVDFIPPL 182
KAVLE LR +S LT D I V YN+ Y I V+E KP S + ++ETD E DF PP+
Sbjct: 141 KAVLENVLRKFSTLTVNDIIEVNYNDTIYGIKVLEVKPDNTSQGICVVETDLETDFAPPV 200
Query: 183 DFKEPE-KPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIA-- 239
+ EPE KP + E P+D P K S + + + K +A
Sbjct: 201 GYVEPEYKPKAIK---------PETTPID---PSKVSRGAGAATMAKSINY--AKLVADS 246
Query: 240 -KFSPFTGSGRCLNGKS 255
K FTGSG+ L+GK+
Sbjct: 247 GKVEKFTGSGQKLSGKT 263
>gi|313225424|emb|CBY06898.1| unnamed protein product [Oikopleura dioica]
Length = 326
Score = 193 bits (491), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 90/185 (48%), Positives = 129/185 (69%), Gaps = 3/185 (1%)
Query: 8 AAFERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRV 64
+ F R++ Y + + ++P + G KI+MPPS+L+ L+ L+I +PMLF+L N S R
Sbjct: 28 STFSREFAAYSVMMMPGNERPDVNAGGKIIMPPSSLETLSRLNISFPMLFKLENRSKERQ 87
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
T+ GV+EFIA+EG +YLP WMM N++L EGD + + ASL SY K +P + DFL+ISN
Sbjct: 88 THAGVLEFIAEEGKVYLPGWMMRNLVLNEGDRIAITYASLPVASYSKFKPQSCDFLEISN 147
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDF 184
PKAVLE LRS++CL+ GD I + Y +++ + +VETKP AV+IIE D VDF P+ +
Sbjct: 148 PKAVLEKHLRSFACLSKGDIISIDYIGREFEVQIVETKPEDAVNIIECDMNVDFEAPVGY 207
Query: 185 KEPEK 189
KEPE+
Sbjct: 208 KEPER 212
>gi|380483808|emb|CCF40390.1| ubiquitin fusion degradation protein UFD1 [Colletotrichum
higginsianum]
Length = 384
Score = 193 bits (491), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 105/264 (39%), Positives = 153/264 (57%), Gaps = 12/264 (4%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYP+ ++P L G KI +PPSALD+++ LH+++P+L E+ N G+ ++
Sbjct: 26 FDEYYRCYPMVMAPGPERPDLNYGSKIFLPPSALDKVSKLHVQWPLLMEIINGEKGKHSH 85
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EF+A+EG YLP+WMM+ + L GD++++K SL VKLQP + +FLDIS+PK
Sbjct: 86 AGVLEFVAEEGRAYLPHWMMQTLSLDVGDMIQIKTTSLELAKLVKLQPQSTNFLDISDPK 145
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIPPLD 183
AVLE R+++ LT GD YN++ Y++ V+E KP T V +IETD EVDF P+
Sbjct: 146 AVLEKAFRNFAALTKGDIFNFEYNDEIYHVAVLEVKPETEKMGVCMIETDVEVDFAAPVG 205
Query: 184 FKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSP 243
+ EPEK S T V+ P G S S++ P A S
Sbjct: 206 YVEPEKQQRGS-GTSTPRSVRGGVP---AGGLLHSQGSMAQSI--NYNAIAPSATAATSR 259
Query: 244 FTGSGRCLNGKSSTQPTVSPSSPL 267
F G G+ L+ K S T P++P+
Sbjct: 260 FYGEGQKLSKKGSKTSTPKPATPV 283
>gi|344303157|gb|EGW33431.1| hypothetical protein SPAPADRAFT_60790 [Spathaspora passalidarum
NRRL Y-27907]
Length = 352
Score = 193 bits (491), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 91/186 (48%), Positives = 121/186 (65%), Gaps = 7/186 (3%)
Query: 10 FERKYRCYPIS----FIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
FE +RCYPI+ I K G KI +PPSAL++L LHI YPMLFEL N SAG T
Sbjct: 20 FEEFFRCYPIAMMPDLIRKDDANYGGKIFLPPSALNKLTMLHIRYPMLFELRNESAGVTT 79
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+ GV+EF+A+EG Y+P WMM + L G ++++ N L G +VK++P + DFLDIS+P
Sbjct: 80 HSGVLEFVAEEGRCYIPQWMMATLKLNPGSLIKISNCDLQLGKFVKIEPQSVDFLDISDP 139
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIPPL 182
+AVLE LR +S LT D I + YN+ Y I V+E KP T + ++ETD E DF PP+
Sbjct: 140 RAVLENVLRKFSTLTVNDIIEINYNDSIYGIKVLEVKPDTDSQGICVVETDLETDFAPPV 199
Query: 183 DFKEPE 188
+ EPE
Sbjct: 200 GYVEPE 205
>gi|322695594|gb|EFY87399.1| ubiquitin fusion degradation protein Ufd1, putative [Metarhizium
acridum CQMa 102]
Length = 358
Score = 193 bits (491), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 104/270 (38%), Positives = 157/270 (58%), Gaps = 19/270 (7%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYP+ ++P L G KI++PPSALD+++ LH+++P+L EL N GR ++
Sbjct: 12 FDEYYRCYPVVMAPGAERPELNYGSKIILPPSALDKVSKLHVQWPLLMELINGEKGRHSH 71
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EFIA+EG Y+P WMME + + GD+++++ SL VKLQP + +FL+IS+PK
Sbjct: 72 AGVLEFIAEEGRAYIPQWMMETLGMDVGDMIQIRTTSLELAKMVKLQPQSVNFLEISDPK 131
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIPPLD 183
AVLE R+++ LT GD YN++ Y + V++ KP T VS+IETD V+F PP+
Sbjct: 132 AVLERAFRNFATLTKGDVFNFEYNDEIYEVAVLDVKPETDKMGVSMIETDVSVEFAPPVG 191
Query: 184 FKEPEKPSSSSLSNRTLPEVKEEPPLDFKG--PEKPSSSSLSNRTPPEVKEEPPKKIAKF 241
+ EPEK S ++ T V + +G + SS++ P V P
Sbjct: 192 YVEPEKRSGTNTPGSTRSGVPTGGLVQSQGTMAQAIGYSSIA----PSVTSNP------- 240
Query: 242 SPFTGSGRCLNGKSSTQPTVSPSSPLIDNP 271
+ F G G+ L K S T P++P+ P
Sbjct: 241 TNFVGEGQRLTKKGSKASTPKPATPVQAEP 270
>gi|399218176|emb|CCF75063.1| unnamed protein product [Babesia microti strain RI]
Length = 403
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/169 (52%), Positives = 123/169 (72%)
Query: 10 FERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGV 69
F +Y+CYP+SFI +E+G+KI++P SAL+ LA +I +PMLF + N T+ GV
Sbjct: 8 FSAEYKCYPVSFIGHDSMEHGNKILLPQSALNDLAMRNITWPMLFRVENPKKATKTHSGV 67
Query: 70 MEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVL 129
+EFI+DEG +LPYWMM+N++L+ GD V V N SL KG++VKL+P + D+ +ISNPKAVL
Sbjct: 68 LEFISDEGTCHLPYWMMQNLMLEIGDTVLVHNVSLPKGTFVKLKPLSMDYWNISNPKAVL 127
Query: 130 ETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDF 178
ET+LR+Y+ LT GD I + Y N Y I + + KP+ A SIIETD EV+F
Sbjct: 128 ETSLRNYATLTVGDIIAIHYLNHVYEIKITDLKPANACSIIETDIEVEF 176
>gi|444314411|ref|XP_004177863.1| hypothetical protein TBLA_0A05510 [Tetrapisispora blattae CBS 6284]
gi|387510902|emb|CCH58344.1| hypothetical protein TBLA_0A05510 [Tetrapisispora blattae CBS 6284]
Length = 354
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 109/252 (43%), Positives = 153/252 (60%), Gaps = 20/252 (7%)
Query: 10 FERKYRCYPISF----IDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
FE +RCYPI+ I K G KI +PPSAL +L L+I YPMLFEL+ + +VT
Sbjct: 19 FESLFRCYPIAMMNDQIRKDDANYGGKIFLPPSALHKLTMLNIRYPMLFELTANDSKKVT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+ GV+EFIA+EG +YLP WMME + +Q G +++V + + G++VK++P + DFLDIS+P
Sbjct: 79 HGGVLEFIAEEGRVYLPQWMMETLQIQPGSLLKVASIDVPLGNFVKIEPQSVDFLDISDP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKP---STAVSIIETDCEVDFIPPL 182
KAVLE LRS+S LT D I + YNNK Y I ++E KP S ++ +IETD DF PP+
Sbjct: 139 KAVLENVLRSFSTLTINDIIEISYNNKIYRIKILEVKPESSSNSICVIETDLITDFAPPV 198
Query: 183 DFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTP-PEVKEEPPKKIAKF 241
+ EP+ +L + L E K+ +D P SS ++S R + E P+
Sbjct: 199 GYVEPD---YKALKEQQLQE-KKAQSID---PANQSSGTMSQRINYKSILNELPE----- 246
Query: 242 SPFTGSGRCLNG 253
S F G G L+G
Sbjct: 247 STFVGQGSKLSG 258
>gi|154288476|ref|XP_001545033.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150408674|gb|EDN04215.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 361
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 122/170 (71%), Gaps = 3/170 (1%)
Query: 23 DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLP 82
++ ++ +G K++MPPSALD+L LHI YPMLFEL N R T+ GV+EFIA+EG IYLP
Sbjct: 6 ERENVNHGGKVIMPPSALDKLTRLHITYPMLFELHNRVKDRTTHAGVLEFIAEEGKIYLP 65
Query: 83 YWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTG 142
+W+M+ +LL+ GD++++K+ L G Y+KLQ + FLDIS+PKAVLE R++SCL+
Sbjct: 66 FWIMQTLLLEPGDLLQIKSTDLPPGQYIKLQAQSTSFLDISDPKAVLENAFRNFSCLSKD 125
Query: 143 DTIMVPYNNKKYYINVVETKPS---TAVSIIETDCEVDFIPPLDFKEPEK 189
D YN+ Y + V+ETKP A+S++ETD EVDF P+ ++EP++
Sbjct: 126 DIFTFSYNDHIYEMAVLETKPQHSKNAISVLETDLEVDFATPVGYEEPKR 175
>gi|400597884|gb|EJP65608.1| ubiquitin fusion degradation protein [Beauveria bassiana ARSEF
2860]
Length = 359
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 122/343 (35%), Positives = 184/343 (53%), Gaps = 38/343 (11%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYP+ ++P L G KI++PPSALD+++ LH+++P+L EL N GR ++
Sbjct: 13 FDEYYRCYPVIMAPGNERPELNYGSKILLPPSALDKVSKLHVQWPLLMELINGEKGRHSH 72
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EFIA+EG Y+P WMME + ++ GD+++++ L VKLQP + +FL+IS+PK
Sbjct: 73 AGVLEFIAEEGRAYIPQWMMETLGMEVGDMIQIRTTLLELAKMVKLQPQSTNFLEISDPK 132
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIPPLD 183
AVLE R+++ LT GD YN++ Y + V++ KP T VS+IETD VDF PP+
Sbjct: 133 AVLERAFRNFATLTKGDVFNFEYNDEVYDVAVLDVKPETDKMGVSMIETDVSVDFAPPVG 192
Query: 184 FKEPEKPSSSSLSNRTLPEVKEEPPLDFKG--PEKPSSSSLSNRTPPEVKEEPPKKIAKF 241
+ EPE+ S +S + T P V L KG + + S+++ P V P
Sbjct: 193 YVEPERNSGTSTPS-TRPGVPAGGVLHSKGTMAQAINYSAIA----PSVTSNP------- 240
Query: 242 SPFTGSGRCLNGKSSTQPTVSPSSPLIDNPQQNAA--NGINGSKSSSASSRQKSGKLVFG 299
+ F G G+ + K S T P++P+ P A I G + A R KL FG
Sbjct: 241 TNFLGEGQRIAKKGSKNATPKPATPV---PVDTTAVPRRITG---APAPLRLAPNKLFFG 294
Query: 300 SNANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
++ P + + + E F G+ SLRG
Sbjct: 295 Y----------EITPVKTDADREKERENADKPHFAGQGQSLRG 327
>gi|403216223|emb|CCK70720.1| hypothetical protein KNAG_0F00510 [Kazachstania naganishii CBS
8797]
Length = 339
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/272 (37%), Positives = 155/272 (56%), Gaps = 27/272 (9%)
Query: 10 FERKYRCYPISF----IDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
FE+ +RCYP++ + K G K+ +PPSAL+RL+ L++ YPMLFE + RVT
Sbjct: 14 FEQLFRCYPVAMMPEGVRKDGANYGGKVFLPPSALNRLSLLNVSYPMLFEFVAQESERVT 73
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
Y GV+EF+A+EG +YLP WMME + +Q G ++ V++A + G +VKL+P + DFLDIS+P
Sbjct: 74 YGGVLEFVAEEGRVYLPQWMMETLEVQPGSVLRVRSAEVPLGKFVKLEPQSVDFLDISDP 133
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKP---STAVSIIETDCEVDFIPPL 182
KAVLE LR++S LT GD + + YN Y I ++E +P S ++ ++ETD DF PP+
Sbjct: 134 KAVLENALRTFSTLTVGDIVEISYNEAVYRIKILEVEPDSTSHSICVVETDLVTDFAPPV 193
Query: 183 DFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSS-----SLSNRTPPEVKEEPPKK 237
+ EPE + + + KGP +S S+ NR E +
Sbjct: 194 GYVEPEPQQRADQAQK-------------KGPRGGDTSKLKVGSMGNRI--EYAKTVMTS 238
Query: 238 IAKFSPFTGSGRCLNGKSSTQPTVSPSSPLID 269
+ F G G ++GK + + + + L+D
Sbjct: 239 SQSTNRFQGEGSKVSGKKAAESSSGATGALLD 270
>gi|366990979|ref|XP_003675257.1| hypothetical protein NCAS_0B08020 [Naumovozyma castellii CBS 4309]
gi|342301121|emb|CCC68886.1| hypothetical protein NCAS_0B08020 [Naumovozyma castellii CBS 4309]
Length = 361
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 106/254 (41%), Positives = 153/254 (60%), Gaps = 14/254 (5%)
Query: 9 AFERKYRCYPISF----IDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRV 64
FE +RCYPI+ I K G KI +PPSAL++L+ L+I YPMLF+L+++ G+V
Sbjct: 20 TFEEFFRCYPIAMMNDRIRKDDANYGGKIFLPPSALNKLSMLNIRYPMLFQLTSSENGKV 79
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
T+ GV+EFIA+EG +YLP WMM + +Q G ++++ + + G +VK++P + DFLDIS+
Sbjct: 80 THGGVLEFIAEEGRVYLPQWMMITLGVQPGSLLKIASTDVPLGQFVKIEPQSVDFLDISD 139
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKP---STAVSIIETDCEVDFIPP 181
PKAVLE LR++S LT D I + YNNK Y I ++E KP S ++ +IETD DF PP
Sbjct: 140 PKAVLENVLRNFSTLTVDDIIEIRYNNKIYGIKILEVKPESQSRSICVIETDLVTDFAPP 199
Query: 182 LDFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTP-PEVKEEPPKKIAK 240
+ + EP+ + + K+ D P S S+S R E+ E A
Sbjct: 200 VGYVEPDYEALKAQEEEKKRIQKQNRKFD---PSIVSQGSMSTRINYSEIVENAS---AG 253
Query: 241 FSPFTGSGRCLNGK 254
S FTG G+ L+GK
Sbjct: 254 DSNFTGQGQKLSGK 267
>gi|238882069|gb|EEQ45707.1| ubiquitin fusion degradation protein 1 [Candida albicans WO-1]
Length = 363
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/255 (42%), Positives = 151/255 (59%), Gaps = 21/255 (8%)
Query: 10 FERKYRCYPIS----FIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
FE +RCYPI+ I K G KI +PPSAL++L LHI YPMLFE+ N ++T
Sbjct: 24 FEEYFRCYPIAMMPDLIRKDDANYGGKIFLPPSALNKLTMLHIRYPMLFEIKNEQNEKLT 83
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+ GV+EFIA+EG YLP WMM + L G ++++ N L G +VK++P + DFLDIS+P
Sbjct: 84 HSGVLEFIAEEGRTYLPQWMMNTLELTPGSLIKITNCDLNLGKFVKIEPQSVDFLDISDP 143
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKP---STAVSIIETDCEVDFIPPL 182
KAVLE LR +S LT D I V YN+ Y I V+E KP S + ++ETD E DF PP+
Sbjct: 144 KAVLENVLRKFSTLTVNDIIEVNYNDAIYGIRVLEVKPDSTSKGICVVETDLETDFAPPV 203
Query: 183 DFKEPE-KPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVK-EEPPKKIAK 240
+ EPE KP + S++ P+D P K + S+ + + + + K
Sbjct: 204 GYVEPEYKPKTVEPSSK---------PID---PSKVNKSAGAATMAKSINYAKLVAEAGK 251
Query: 241 FSPFTGSGRCLNGKS 255
+ F+GSG+ L+GKS
Sbjct: 252 TTKFSGSGQKLSGKS 266
>gi|402225223|gb|EJU05284.1| UFD1-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 378
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 123/350 (35%), Positives = 179/350 (51%), Gaps = 48/350 (13%)
Query: 9 AFERKYRCYPISFIDKPHLEN---GDKIVMPPSALDRLAYLHIEYPMLFELSNTS-AGRV 64
AF+ +R Y ++ +++ N G KI+MPPSAL L L IE P +F+L N S +
Sbjct: 8 AFDEYFRAYSVAMLNQKERANVSYGGKIIMPPSALASLTRLDIEAPWMFQLRNPSNSAAT 67
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
T+ GV+EFIADEG +YLPYWMM+ + L EGD + + A L KG+ VKLQ T DFLD+S
Sbjct: 68 THSGVLEFIADEGCVYLPYWMMKTLRLAEGDAIRITGAVLPKGTLVKLQAQTVDFLDVSE 127
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKP-STAVSIIETDCEVDFIPPLD 183
PKAVLE + R+YS LT GD I + YN + + V+E +P A++II+ D V+F PP
Sbjct: 128 PKAVLEQSFRNYSALTMGDIIEIAYNGLTFELLVMEVQPLGQAINIIDVDLSVEFAPPKG 187
Query: 184 FKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSP 243
+ EPE+P+ KP + S K+E + A F
Sbjct: 188 YVEPERPAP-----------------------KPVPTMASKLGIDTGKQETVAEAAGFEA 224
Query: 244 FTGSGRCLNGKSSTQ--------PTVSPSSPLI--DNPQQNAANGINGSKSSSASSRQKS 293
F G G+ LNG+ + V S +I D P+ ++ ++ + A+
Sbjct: 225 FKGVGQALNGRRTKGKGKSGRKIQEVDEFSRIIRTDKPKLMTSDTVDAERKVPAALNLPF 284
Query: 294 GKLVFGSNANQSSNGTP-KVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
GKL FG TP + + +S+ P E++ Q F G+ +L G
Sbjct: 285 GKLFFGFPV------TPLRPVAESTQTAPAAAEQE---QTFQGQGQTLSG 325
>gi|50304703|ref|XP_452307.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641440|emb|CAH01158.1| KLLA0C02475p [Kluyveromyces lactis]
Length = 345
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 126/340 (37%), Positives = 178/340 (52%), Gaps = 49/340 (14%)
Query: 10 FERKYRCYPISF----IDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
E +RCYPI+ I K G KI +PPSAL++L L++ YPMLFEL + +G+VT
Sbjct: 19 LEEFFRCYPIAMMNDNIRKDDANYGGKIFLPPSALNKLTLLNVRYPMLFELKSQESGKVT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+ GV+EFIA+EG +YLP WMME + +Q G ++++ + + G +VKL+P + DFLDIS+P
Sbjct: 79 HGGVLEFIAEEGRVYLPQWMMETLEIQPGSVLQICSTDVPLGQFVKLEPQSVDFLDISDP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKP---STAVSIIETDCEVDFIPPL 182
KAVLE LR++S LT D I + YNNK Y I ++E KP S ++ +IETD DF PP+
Sbjct: 139 KAVLERVLRNFSTLTIDDIIEISYNNKVYRIRILEVKPESSSKSICVIETDLVTDFAPPV 198
Query: 183 DFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFS 242
+ EP+ S K+ P D P S+S R +P K F
Sbjct: 199 GYVEPDYKSQK----------KQTPSFD---PSIKGLGSMSKRINYAEILDPTDKDKSFH 245
Query: 243 PFTGSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSS-ASSRQKSGKLVFGSN 301
G G+ L+GK+ P+++ I+ S + A G+L F
Sbjct: 246 ---GEGQKLSGKAI-------------KPKEDDIKEISVSLDGNPAPLNLPEGQLFF--- 286
Query: 302 ANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
G P V PKS GE ++ FQ G+ SLR
Sbjct: 287 ------GFPYVPPKSDDGEDNEIASSKVFQ---GEGKSLR 317
>gi|336263952|ref|XP_003346755.1| hypothetical protein SMAC_04187 [Sordaria macrospora k-hell]
gi|380091462|emb|CCC10958.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 384
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 129/191 (67%), Gaps = 6/191 (3%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYP+ ++P L G KI++PPSALD+++ LH+++P++ EL N S G T+
Sbjct: 20 FDEYYRCYPLVMAPGAERPELNYGSKILLPPSALDKVSRLHVQWPIMLELINGSLGAHTH 79
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EF+A+EG Y+P WMM+ + L+ GDI+++K SL VKLQP + +FLDIS+P+
Sbjct: 80 AGVLEFVAEEGRAYIPQWMMQTLKLEVGDIIQIKTTSLELAKLVKLQPQSVNFLDISDPR 139
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTA---VSIIETDCEVDFIPPLD 183
AVLE R+++ LT GD YN++ Y + V++ KP TA V +IETD VDF PP+
Sbjct: 140 AVLEKAFRNFAALTKGDVFNFEYNDEIYEMAVLDVKPETAKMGVCMIETDVSVDFAPPVG 199
Query: 184 FKEPEKPSSSS 194
+ EP +P+ S
Sbjct: 200 YVEPPRPAQGS 210
>gi|365760640|gb|EHN02346.1| Ufd1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 363
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 123/350 (35%), Positives = 178/350 (50%), Gaps = 53/350 (15%)
Query: 10 FERKYRCYPISF----IDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
FE +RCYPI+ I K G KI +PPSAL +L+ L+I YPMLF+L+ GRVT
Sbjct: 21 FEEFFRCYPIAMMNDRIRKDDANFGGKIFLPPSALSKLSVLNIRYPMLFKLTVNETGRVT 80
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EFIA+EG +YLP WMME + +Q G ++++ + + G +VKL+P + DFLDIS+P
Sbjct: 81 HCGVLEFIAEEGRVYLPQWMMETLGIQPGSLLQISSTDVPLGQFVKLEPQSVDFLDISDP 140
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIPPL 182
KAVLE LR++S LT D I + YN K + I ++E KP + ++ +IETD DF P+
Sbjct: 141 KAVLENVLRNFSTLTVDDIIEISYNGKTFKIKILEVKPESSLKSICVIETDLVTDFAAPV 200
Query: 183 DFKEPE-----------KPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVK 231
+ EP+ K +SS P V + + + ++S+ N+
Sbjct: 201 GYVEPDYKALKAQQDKGKKGTSSRGQVLDPSVLGQGSMSTRINYAGVANSIKNKQ----- 255
Query: 232 EEPPKKIAKFSPFTGSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQ 291
S F G G+ ++GK+ P P + +QN + A
Sbjct: 256 ----------SKFLGEGQNISGKA---PKKGPEA------KQNVKDMKITFDGEPARLDL 296
Query: 292 KSGKLVFGSNANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
G+L F G P VLPK + E K Q F G+ SLR
Sbjct: 297 PEGQLFF---------GFPMVLPKEDT--EGDSEAKSNEQNFQGQGISLR 335
>gi|358386877|gb|EHK24472.1| hypothetical protein TRIVIDRAFT_71825 [Trichoderma virens Gv29-8]
Length = 376
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 123/342 (35%), Positives = 182/342 (53%), Gaps = 35/342 (10%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYP+ ++P L G KI++PPSALD+++ LH+++P+L E+ N G+ ++
Sbjct: 29 FDEYYRCYPLIMAPGSERPELNFGSKIILPPSALDKVSKLHVQWPLLMEMINGEKGKHSH 88
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EFIA+EG Y+P WMM + L GD+++++ SL VKLQP + +FLDIS+PK
Sbjct: 89 AGVLEFIAEEGRAYIPQWMMVTLGLDVGDMIQIRTTSLELARMVKLQPQSVNFLDISDPK 148
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIPPLD 183
AVLE R+++ LT GD YN++ Y + V++ KP T VS+IETD V+F P+
Sbjct: 149 AVLEKAFRNFATLTKGDIFNFEYNDEVYEVAVLDVKPETEKMGVSMIETDVSVEFAAPVG 208
Query: 184 FKEPEKPSSSSLSNRTLPEVKEEPPLDFKG--PEKPSSSSLSNRTPPEVKEEPPKKIAKF 241
+ EPE+ S +S T+ V L +G + + SS++ P V P
Sbjct: 209 YVEPERKSGTSTPRSTMGGVPAGGVLHSQGTMAQAINYSSIA----PSVTSVP------- 257
Query: 242 SPFTGSGRCLNGKSSTQPTVSPSSPL-IDNPQQNAANGINGSKSSSASSRQKSGKLVFGS 300
+ F G G+ L K S T P++P+ +D A NG + A R KL FG
Sbjct: 258 TNFLGEGQRLTKKGSKTATPKPATPVPVDT--TGAPRRRNG---APAPLRLPPNKLFFGY 312
Query: 301 NANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
T K K +S +P F G+ SLRG
Sbjct: 313 ELKPLKTDTEKDQDKENSSKP----------HFAGQGQSLRG 344
>gi|429327681|gb|AFZ79441.1| ubiquitin fusion degradation protein, putative [Babesia equi]
Length = 269
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 125/177 (70%)
Query: 2 YENHHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSA 61
+ N YRC+ +SF K +ENG+KI++P SAL+ LA +I +PM+FE+ N
Sbjct: 14 FNNLSSTPLVNNYRCFSVSFAGKESMENGNKILLPQSALNELASRNISWPMMFEIKNPKN 73
Query: 62 GRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLD 121
G++T+ GV+EFI++EG +PYW+M+N+ L EG +V ++N SL K +VKL+P T+D+ +
Sbjct: 74 GKITHGGVLEFISEEGCCNIPYWVMQNLGLNEGQVVTIRNVSLPKALWVKLKPLTEDYWE 133
Query: 122 ISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDF 178
ISNP+A+LET+LR+++ LT GD I + Y NK Y I +VE KP A SIIETD EV+F
Sbjct: 134 ISNPRAILETSLRNFATLTAGDIIPIHYINKVYNIEIVELKPGFACSIIETDMEVEF 190
>gi|444724101|gb|ELW64720.1| Ubiquitin fusion degradation protein 1 like protein [Tupaia
chinensis]
Length = 327
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 107/282 (37%), Positives = 156/282 (55%), Gaps = 54/282 (19%)
Query: 10 FERKYRCYPISFIDKPH---LENGDKIVMPPSALDRLAY----------LHIEYPMLFEL 56
F +YRC+ +S + P+ ++ ++ P + + + L+I YPMLF+L
Sbjct: 19 FSTQYRCFSVSMLAGPNDSRQQSSLRMWGPEAGVTAKTFPIPDLLSGGRLNITYPMLFKL 78
Query: 57 SNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHT 116
+N ++ RVT+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP +
Sbjct: 79 TNKNSDRVTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQS 138
Query: 117 KDFLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETD--- 173
DFLDI+NPKAVLE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D
Sbjct: 139 PDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNV 198
Query: 174 --------CEVDFIPPLDFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNR 225
VDF PL +KEPE+ + + E D + + L
Sbjct: 199 SGSVCFRQARVDFDAPLGYKEPER------------QAQHEESTDGEADHGGYAGELG-- 244
Query: 226 TPPEVKEEPPKKIAKFSPFTGSGRCLNG-KSSTQPTVSPSSP 266
F F+GSG L+G K +P+ SP P
Sbjct: 245 ---------------FRAFSGSGNRLDGKKKGVEPSPSPIKP 271
>gi|323304825|gb|EGA58583.1| Ufd1p [Saccharomyces cerevisiae FostersB]
gi|323309020|gb|EGA62249.1| Ufd1p [Saccharomyces cerevisiae FostersO]
Length = 361
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 89/186 (47%), Positives = 125/186 (67%), Gaps = 7/186 (3%)
Query: 10 FERKYRCYPISF----IDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
FE +RCYPI+ I K G KI +PPSAL +L+ L+I YPMLF+L+ GRVT
Sbjct: 21 FEEFFRCYPIAMMNDRIRKDDANFGGKIFLPPSALSKLSMLNIRYPMLFKLTANETGRVT 80
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+ GV+EFIA+EG +YLP WMME + +Q G ++++ + + G +VKL+P + DFLDIS+P
Sbjct: 81 HGGVLEFIAEEGRVYLPQWMMETLGIQPGSLLQISSTDVPLGQFVKLEPQSVDFLDISDP 140
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKP---STAVSIIETDCEVDFIPPL 182
KAVLE LR++S LT D I + YN K + I ++E KP S ++ +IETD DF PP+
Sbjct: 141 KAVLENVLRNFSTLTVDDVIEISYNGKTFKIKILEVKPESSSKSICVIETDLVTDFAPPV 200
Query: 183 DFKEPE 188
+ EP+
Sbjct: 201 GYVEPD 206
>gi|50291255|ref|XP_448060.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527371|emb|CAG61011.1| unnamed protein product [Candida glabrata]
Length = 332
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 90/186 (48%), Positives = 127/186 (68%), Gaps = 7/186 (3%)
Query: 10 FERKYRCYPISF----IDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
FE +RCYPI+ I K G KI +PPSAL+RL+ L+I YPMLF L++ +G+VT
Sbjct: 19 FEDFFRCYPIAMMNDRIRKDDANFGGKIFLPPSALNRLSMLNIRYPMLFRLTSNESGKVT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+ GV+EFIA+EG +YLP WMME + Q G ++++ + + G +VK++P + DFLDI++P
Sbjct: 79 HGGVLEFIAEEGRVYLPQWMMETLNAQPGSLMKINSTDVPLGQFVKIEPQSTDFLDITDP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTA---VSIIETDCEVDFIPPL 182
KAVLE LR++S LT D I + YNNK Y I V+E KP +A + +IETD DF PP+
Sbjct: 139 KAVLENVLRNFSTLTIDDIIEISYNNKTYRIKVLEVKPESAAKSICVIETDLVTDFAPPV 198
Query: 183 DFKEPE 188
+ EP+
Sbjct: 199 GYVEPD 204
>gi|6321485|ref|NP_011562.1| polyubiquitin-binding protein UFD1 [Saccharomyces cerevisiae S288c]
gi|1717964|sp|P53044.1|UFD1_YEAST RecName: Full=Ubiquitin fusion degradation protein 1; Short=UB
fusion protein 1; AltName: Full=Polymerase-interacting
protein 3
gi|790621|gb|AAC49023.1| Ufd1p [Saccharomyces cerevisiae]
gi|1323053|emb|CAA97047.1| UFD1 [Saccharomyces cerevisiae]
gi|1835686|gb|AAB46627.1| Pip3p [Saccharomyces cerevisiae]
gi|51013063|gb|AAT92825.1| YGR048W [Saccharomyces cerevisiae]
gi|71064036|gb|AAZ22463.1| Ufd1p [Saccharomyces cerevisiae]
gi|151943330|gb|EDN61643.1| ubiquitin fusion degradation protein [Saccharomyces cerevisiae
YJM789]
gi|190406927|gb|EDV10194.1| ubiquitin fusion degradation protein 1 [Saccharomyces cerevisiae
RM11-1a]
gi|207345199|gb|EDZ72096.1| YGR048Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256269085|gb|EEU04421.1| Ufd1p [Saccharomyces cerevisiae JAY291]
gi|259146552|emb|CAY79809.1| Ufd1p [Saccharomyces cerevisiae EC1118]
gi|285812246|tpg|DAA08146.1| TPA: polyubiquitin-binding protein UFD1 [Saccharomyces cerevisiae
S288c]
gi|323333500|gb|EGA74894.1| Ufd1p [Saccharomyces cerevisiae AWRI796]
gi|323337681|gb|EGA78926.1| Ufd1p [Saccharomyces cerevisiae Vin13]
gi|323348581|gb|EGA82825.1| Ufd1p [Saccharomyces cerevisiae Lalvin QA23]
gi|349578264|dbj|GAA23430.1| K7_Ufd1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365765653|gb|EHN07160.1| Ufd1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299303|gb|EIW10397.1| Ufd1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 361
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 89/186 (47%), Positives = 125/186 (67%), Gaps = 7/186 (3%)
Query: 10 FERKYRCYPISF----IDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
FE +RCYPI+ I K G KI +PPSAL +L+ L+I YPMLF+L+ GRVT
Sbjct: 21 FEEFFRCYPIAMMNDRIRKDDANFGGKIFLPPSALSKLSMLNIRYPMLFKLTANETGRVT 80
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+ GV+EFIA+EG +YLP WMME + +Q G ++++ + + G +VKL+P + DFLDIS+P
Sbjct: 81 HGGVLEFIAEEGRVYLPQWMMETLGIQPGSLLQISSTDVPLGQFVKLEPQSVDFLDISDP 140
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKP---STAVSIIETDCEVDFIPPL 182
KAVLE LR++S LT D I + YN K + I ++E KP S ++ +IETD DF PP+
Sbjct: 141 KAVLENVLRNFSTLTVDDVIEISYNGKTFKIKILEVKPESSSKSICVIETDLVTDFAPPV 200
Query: 183 DFKEPE 188
+ EP+
Sbjct: 201 GYVEPD 206
>gi|156374459|ref|XP_001629824.1| predicted protein [Nematostella vectensis]
gi|156216833|gb|EDO37761.1| predicted protein [Nematostella vectensis]
Length = 305
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 126/345 (36%), Positives = 179/345 (51%), Gaps = 71/345 (20%)
Query: 9 AFERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F+ +YRCY ++ + ++ +E G KI+MPPSALD+L L+I YPMLF+L+N R T
Sbjct: 13 VFKTQYRCYSVAMLPGNERKDVERGGKIIMPPSALDQLTRLNIVYPMLFKLTNNRIDRST 72
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG IYLP+WMM NMLL EG +++V++ASL S+ K QP + DFLDI+NP
Sbjct: 73 HCGVLEFVADEGKIYLPHWMMRNMLLDEGGLLQVESASLPVASFAKFQPQSVDFLDITNP 132
Query: 126 KAVL----ETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPP 181
KAVL L + S + P + Y V+ETKP AVSIIE D +V+F P
Sbjct: 133 KAVLGMYCTVVLVTASYFDCCSLFLSP---QIYEFLVMETKPGKAVSIIECDMQVEFAAP 189
Query: 182 LDFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKF 241
+ + EP++ + + E EEP P ++ K
Sbjct: 190 VGYVEPKRQQQQV---KKMEEESEEP-------------------------HPAAQVTKL 221
Query: 242 SPFTGSGRCLNGKS-----STQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKL 296
+ FTG G L+GK S++P P P++ K + K GK+
Sbjct: 222 A-FTGEGFRLDGKKKKMNVSSEPV--PLEPVV-------------IKRGIPNYDYKKGKI 265
Query: 297 VFGSNANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
F N + SN S + E PQ P+F+AF G+ +LR
Sbjct: 266 TFKRNFYKPSN--------SQTKETPQ----PEFEAFKGEGKTLR 298
>gi|323355012|gb|EGA86843.1| Ufd1p [Saccharomyces cerevisiae VL3]
Length = 361
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 89/186 (47%), Positives = 125/186 (67%), Gaps = 7/186 (3%)
Query: 10 FERKYRCYPISF----IDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
FE +RCYPI+ I K G KI +PPSAL +L+ L+I YPMLF+L+ GRVT
Sbjct: 21 FEEFFRCYPIAMMNDRIRKDDANFGGKIFLPPSALSKLSMLNIRYPMLFKLTANEXGRVT 80
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+ GV+EFIA+EG +YLP WMME + +Q G ++++ + + G +VKL+P + DFLDIS+P
Sbjct: 81 HGGVLEFIAEEGRVYLPQWMMETLGIQPGSLLQISSTDVPLGQFVKLEPQSVDFLDISDP 140
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKP---STAVSIIETDCEVDFIPPL 182
KAVLE LR++S LT D I + YN K + I ++E KP S ++ +IETD DF PP+
Sbjct: 141 KAVLENVLRNFSTLTVDDVIEISYNGKTFKIKILEVKPESSSKSICVIETDLVTDFAPPV 200
Query: 183 DFKEPE 188
+ EP+
Sbjct: 201 GYVEPD 206
>gi|12849353|dbj|BAB28306.1| unnamed protein product [Mus musculus]
Length = 267
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 100/230 (43%), Positives = 143/230 (62%), Gaps = 31/230 (13%)
Query: 38 SALDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIV 97
SALD+L+ L+I YPMLF+L+N ++ R+T+CGV+EF+ + L +LP+WMM+N+LL+EG +V
Sbjct: 12 SALDQLSRLNITYPMLFKLTNKNSDRMTHCGVLEFVLMKHL-FLPHWMMQNLLLEEGGLV 70
Query: 98 EVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYIN 157
+V++ +L +Y K QP + DFLDI+NPKAVLE LR+++CLTTGD I + YN K Y +
Sbjct: 71 QVESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELR 130
Query: 158 VVETKPSTAVSIIETDCEVDFIPPLDFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKP 217
V+ETKP AVSIIE D VDF PL +KEPE+P V+ E ++ +
Sbjct: 131 VMETKPDKAVSIIECDMNVDFDAPLGYKEPERP------------VQHEESIEGEADHSG 178
Query: 218 SSSSLSNRTPPEVKEEPPKKIAKFSPFTGSGRCLNG-KSSTQPTVSPSSP 266
+ + F F+GSG L+G K +P+ SP P
Sbjct: 179 YAGEVG-----------------FRAFSGSGNRLDGKKKGVEPSPSPIKP 211
>gi|402076563|gb|EJT71986.1| ubiquitin fusion degradation protein 1 [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 373
Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 88/193 (45%), Positives = 127/193 (65%), Gaps = 6/193 (3%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYP+ ++P L +G KI +P SALD+++ LH+++P+L EL N R T+
Sbjct: 17 FDEYYRCYPMIMAPGSERPELNHGSKIFLPASALDKVSKLHVQWPLLMELINGENDRHTH 76
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EF+A+EG YLP WMM+ +LL GD++++K+ SL VKLQP + FLDIS+P+
Sbjct: 77 SGVLEFVAEEGRAYLPQWMMQTLLLDVGDMIQIKSTSLDLARLVKLQPQSTKFLDISDPR 136
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTA---VSIIETDCEVDFIPPLD 183
AVLE R+++ LT GD YN+ Y + V++ KP +A VS+IETD VDF PP+
Sbjct: 137 AVLEKAFRNFATLTKGDVFSFEYNDDVYEMAVLDVKPESAKMGVSMIETDVSVDFAPPVG 196
Query: 184 FKEPEKPSSSSLS 196
+ EPE+ S S
Sbjct: 197 YVEPERQKGSGTS 209
>gi|410078494|ref|XP_003956828.1| hypothetical protein KAFR_0D00460 [Kazachstania africana CBS 2517]
gi|372463413|emb|CCF57693.1| hypothetical protein KAFR_0D00460 [Kazachstania africana CBS 2517]
Length = 353
Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 123/340 (36%), Positives = 182/340 (53%), Gaps = 39/340 (11%)
Query: 9 AFERKYRCYPISF----IDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRV 64
FE +RCYPI+ I K G KI +PPSAL++L+ L+I YPMLF+L G V
Sbjct: 18 VFEEFFRCYPIAIMNDRIRKDEANFGGKIFLPPSALNKLSMLNIRYPMLFKLEANENGMV 77
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
T+ GV+EFIA+EG YLP WM+E + +Q G ++++ + + G +VKL+P + DFLDIS+
Sbjct: 78 THGGVLEFIAEEGRAYLPQWMLETLNVQPGSLLKITSTDVPLGQFVKLEPQSVDFLDISD 137
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIPP 181
PKAVLE LR++S L+ D + + YNNK Y I ++E KP + ++ +IETD DF PP
Sbjct: 138 PKAVLENVLRNFSTLSVDDIVEISYNNKTYKIKILEVKPESQAKSICVIETDLVTDFAPP 197
Query: 182 LDFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKF 241
+ + EP+ + + K D P + S+S R K K+
Sbjct: 198 VGYVEPDYEALRQQKEEEERQRKASRKFD---PATVAQGSMSTRINYTDKLNSTKET--- 251
Query: 242 SPFTGSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSN 301
S F G G+ L+GKS+ + +D + N + ++G + A G+L F
Sbjct: 252 SAFAGEGQKLSGKSTKK--------YVDIKEINIS--LDG---TPARLDLPDGQLFF--- 295
Query: 302 ANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
G P VLPKS Q +++ K +F G+ SLR
Sbjct: 296 ------GFPIVLPKSDD----QKDQESKPDSFHGQGQSLR 325
>gi|354546852|emb|CCE43584.1| hypothetical protein CPAR2_212280 [Candida parapsilosis]
Length = 355
Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 91/191 (47%), Positives = 126/191 (65%), Gaps = 8/191 (4%)
Query: 10 FERKYRCYPIS----FIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
FE +RCYPI+ + K G KI +PPSAL++L LHI YPMLFEL N +T
Sbjct: 12 FEEYFRCYPIAMMPDLVRKDDANYGGKIFLPPSALNKLTMLHIRYPMLFELRNEQKDLLT 71
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+ GV+EF ++EG Y+P WMM+ + LQ G +++++N L+ G +VK++P + DFLDIS+P
Sbjct: 72 HSGVLEFTSEEGRCYIPQWMMDTLQLQPGSLIKIRNCDLSLGKFVKIEPQSVDFLDISDP 131
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTA---VSIIETDCEVDFIPPL 182
KAVLE LR +S LT D I V YN+ Y I V+E KP ++ + ++ETD E DF PP+
Sbjct: 132 KAVLENVLRKFSTLTVNDVIEVNYNDSIYGIKVLEVKPESSTHGICVVETDLETDFAPPV 191
Query: 183 DFKEPE-KPSS 192
+ EPE KP S
Sbjct: 192 GYVEPEYKPKS 202
>gi|254584702|ref|XP_002497919.1| ZYRO0F16522p [Zygosaccharomyces rouxii]
gi|186703695|emb|CAQ43388.1| Ubiquitin fusion degradation protein 1 [Zygosaccharomyces rouxii]
gi|238940812|emb|CAR28986.1| ZYRO0F16522p [Zygosaccharomyces rouxii]
Length = 351
Score = 190 bits (483), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 104/252 (41%), Positives = 146/252 (57%), Gaps = 16/252 (6%)
Query: 10 FERKYRCYPISF----IDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
FE +RCYP++ I K G KI +PPSAL +L L++ YPMLFEL+ G+VT
Sbjct: 19 FEEFFRCYPVAMMNDRIRKDDANFGGKIFLPPSALSKLTMLNVRYPMLFELTANENGKVT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+ GV+EFIA+EG YLP WMME + +Q G ++++ + L G +VK+QP + DFLDI++P
Sbjct: 79 HGGVLEFIAEEGRAYLPQWMMETLGVQPGSLLKIGSTDLPLGQFVKIQPQSVDFLDITDP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTA---VSIIETDCEVDFIPPL 182
KAVLE LR +S LT D I + YN+ Y I V+E KP T+ V +IETD DF PP+
Sbjct: 139 KAVLENVLRKFSTLTVDDIIEINYNDSLYRIKVLEVKPDTSSRGVCVIETDLVTDFAPPV 198
Query: 183 DFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFS 242
+ EP+ + K++P G S+S R + + +KI S
Sbjct: 199 GYVEPDYKELQKQKAEEIRRTKQDPSAHENG-------SMSRRINYKGMIKDHQKIQ--S 249
Query: 243 PFTGSGRCLNGK 254
F G G+ L+GK
Sbjct: 250 GFVGDGQKLSGK 261
>gi|46123755|ref|XP_386431.1| hypothetical protein FG06255.1 [Gibberella zeae PH-1]
Length = 380
Score = 190 bits (483), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 119/344 (34%), Positives = 180/344 (52%), Gaps = 38/344 (11%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYP+ ++P L G KI++PPSALD+++ LH+++P+L EL N GR ++
Sbjct: 32 FDEYYRCYPLVMAPGAERPELNYGSKIILPPSALDKVSKLHVQWPLLMELINGEKGRHSH 91
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EFIA+EG Y+P WMM + + GD+++++ SL VKLQP + +FL+IS+PK
Sbjct: 92 AGVLEFIAEEGRAYIPQWMMVTLGMDVGDMIQIRTTSLELAKMVKLQPQSVNFLEISDPK 151
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIPPLD 183
AVLE R+++ LT GD YN++ Y + V++ KP T VS+IETD V+F PP+
Sbjct: 152 AVLEKAFRNFATLTKGDVFNFSYNDEVYDVAVLDVKPETDKMGVSMIETDVSVEFAPPVG 211
Query: 184 FKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPS--SSSLSNRTPPEVKEEPPKKIAKF 241
+ EPE+ S +S T L +G S S+++ P +
Sbjct: 212 YVEPERQSGTSTPRSTRGGAPAGGLLHNQGTMAQSINYSAIA-----------PSVTSNV 260
Query: 242 SPFTGSGRCLNGKSSTQPTVSPSSPL--IDNPQQNAANGINGSKSSS-ASSRQKSGKLVF 298
+ F G G+ L KSS T P++P+ +D P G+ + + A+ R KL F
Sbjct: 261 TNFLGEGQKLVKKSSKASTPKPATPVPTVDIP------GMPKRRDGAPAALRLAPNKLFF 314
Query: 299 GSNANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
G K K S+ P F G+ +LRG
Sbjct: 315 GYEIKPVKTDADKEKEKESANRP----------HFAGQGQTLRG 348
>gi|401841616|gb|EJT43979.1| UFD1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 363
Score = 190 bits (482), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 88/186 (47%), Positives = 125/186 (67%), Gaps = 7/186 (3%)
Query: 10 FERKYRCYPISF----IDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
FE +RCYPI+ I K G KI +PPSAL +L+ L+I YPMLF+L+ GRVT
Sbjct: 21 FEEFFRCYPIAMMNDRIRKDDANFGGKIFLPPSALSKLSVLNIRYPMLFKLTVNETGRVT 80
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EFIA+EG +YLP WMME + +Q G ++++ + + G +VKL+P + DFLDIS+P
Sbjct: 81 HCGVLEFIAEEGRVYLPQWMMETLGIQPGSLLQISSTDVPLGQFVKLEPQSVDFLDISDP 140
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIPPL 182
KAVLE LR++S LT D I + YN K + I ++E KP + ++ +IETD DF P+
Sbjct: 141 KAVLENVLRNFSTLTVDDIIEISYNGKTFKIKILEVKPESSLKSICVIETDLVTDFAAPV 200
Query: 183 DFKEPE 188
+ EP+
Sbjct: 201 GYVEPD 206
>gi|340522604|gb|EGR52837.1| predicted protein [Trichoderma reesei QM6a]
Length = 372
Score = 190 bits (482), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 101/266 (37%), Positives = 158/266 (59%), Gaps = 19/266 (7%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYP+ ++P L G KI++PPSALD+++ LH+++P+L EL N G+ ++
Sbjct: 28 FDEYYRCYPLIMAPGSERPELNFGSKIILPPSALDKVSKLHVQWPLLMELINGEKGKHSH 87
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EFIA+EG Y+P WMME + L GD+++++ SL VKLQP + +FL+IS+PK
Sbjct: 88 AGVLEFIAEEGRAYIPQWMMETLGLDVGDMIQIRTTSLELARMVKLQPQSVNFLEISDPK 147
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIPPLD 183
AVLE R+++ LT GD YN++ Y++ V++ KP T VS+IETD V+F P+
Sbjct: 148 AVLEKAFRNFATLTKGDIFNFEYNDEVYHVAVLDVKPETEKMGVSMIETDVSVEFAAPVG 207
Query: 184 FKEPEKPSSSSLSNRTLPEVKEEPPLDFKG--PEKPSSSSLSNRTPPEVKEEPPKKIAKF 241
+ EPE+ S +S T+ V L +G + + S+++ P V P
Sbjct: 208 YVEPERKSGTSTPRSTMGGVPAGGVLHSQGTMAQAINYSAIA----PSVTSVP------- 256
Query: 242 SPFTGSGRCLNGKSSTQPTVSPSSPL 267
+ F G G+ + K S T P++P+
Sbjct: 257 TNFIGEGQRVAKKGSKTATPKPATPV 282
>gi|430813926|emb|CCJ28774.1| unnamed protein product [Pneumocystis jirovecii]
Length = 328
Score = 190 bits (482), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 128/189 (67%), Gaps = 6/189 (3%)
Query: 6 HDAAFERKYRCYPISFID---KPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAG 62
+ F YRCY +S ++ + + G K+++PPS L++L+ L+I YPMLFEL NT
Sbjct: 18 QNQIFRGYYRCYSVSMMEGNERNSVNFGGKVILPPSVLNKLSRLNISYPMLFELKNTEKD 77
Query: 63 RVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDI 122
R+T+ GV+EFIA+EG IYLP WMM+ +LL++GD++ V + L GSYVK++P DFL I
Sbjct: 78 RITHAGVLEFIAEEGRIYLPLWMMQTLLLEQGDLLSVVSTKLPLGSYVKIRPQHPDFLQI 137
Query: 123 SNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFI 179
++PKAVLE LR++S LT D + YN + Y I V++ KP ++S+IETD E +F
Sbjct: 138 TDPKAVLENALRNFSALTKEDIFQINYNEQIYEIEVLDIKPDDGRGSISVIETDLEANFA 197
Query: 180 PPLDFKEPE 188
PPL + EPE
Sbjct: 198 PPLGYSEPE 206
>gi|346975299|gb|EGY18751.1| ubiquitin fusion degradation protein [Verticillium dahliae VdLs.17]
Length = 374
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/196 (45%), Positives = 131/196 (66%), Gaps = 9/196 (4%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYP+ F ++P L G KI +PPSALD+++ LH+++P++ E+ N G+ ++
Sbjct: 16 FDEYYRCYPMVFAPGPERPDLNYGSKIFLPPSALDKVSKLHVQWPLIMEIINGEKGKHSH 75
Query: 67 CGVMEFIADEGLIYLPYW--MMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
GV+EF+A+EG YLP W MM+ + L GD++++K SL +VKLQP + +FLDIS+
Sbjct: 76 AGVLEFVAEEGKAYLPQWLQMMQTLGLDVGDLIQIKTTSLELARHVKLQPQSVNFLDISD 135
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIPP 181
PKAVLE R+++ LT GD YN++ Y + V+E KP T VS+IETD EVDF PP
Sbjct: 136 PKAVLEKAFRNFATLTKGDVFNFSYNDEVYDVAVLEVKPETDKMGVSMIETDVEVDFAPP 195
Query: 182 LDFKEPEK-PSSSSLS 196
+ + EPE+ P S S
Sbjct: 196 VGYVEPERQPRGSGTS 211
>gi|302412503|ref|XP_003004084.1| ubiquitin fusion degradation protein [Verticillium albo-atrum
VaMs.102]
gi|261356660|gb|EEY19088.1| ubiquitin fusion degradation protein [Verticillium albo-atrum
VaMs.102]
Length = 374
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/196 (45%), Positives = 131/196 (66%), Gaps = 9/196 (4%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYP+ F ++P L G KI +PPSALD+++ LH+++P++ E+ N G+ ++
Sbjct: 16 FDEYYRCYPMVFAPGPERPDLNYGSKIFLPPSALDKVSKLHVQWPLIMEIINGEKGKHSH 75
Query: 67 CGVMEFIADEGLIYLPYW--MMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
GV+EF+A+EG YLP W MM+ + L GD++++K SL +VKLQP + +FLDIS+
Sbjct: 76 AGVLEFVAEEGKAYLPQWLQMMQTLGLDVGDLIQIKTTSLELARHVKLQPQSVNFLDISD 135
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIPP 181
PKAVLE R+++ LT GD YN++ Y + V+E KP T VS+IETD EVDF PP
Sbjct: 136 PKAVLEKAFRNFATLTKGDVFNFSYNDEVYDVAVLEVKPETDKMGVSMIETDVEVDFAPP 195
Query: 182 LDFKEPEK-PSSSSLS 196
+ + EPE+ P S S
Sbjct: 196 VGYVEPERQPRGSGTS 211
>gi|255716080|ref|XP_002554321.1| KLTH0F02530p [Lachancea thermotolerans]
gi|238935704|emb|CAR23884.1| KLTH0F02530p [Lachancea thermotolerans CBS 6340]
Length = 351
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/339 (35%), Positives = 178/339 (52%), Gaps = 44/339 (12%)
Query: 10 FERKYRCYPISF----IDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
FE +RCYPIS I K G KI +PPSAL++L L++ YPMLFEL+ +VT
Sbjct: 22 FEDFFRCYPISMMNDRIRKDDANFGGKIFLPPSALNKLTMLNVRYPMLFELTVPDTKKVT 81
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+ GV+EFIA+EG +YLP WMME + + G ++++ + + G +VK++P + DFLDIS+P
Sbjct: 82 HGGVLEFIAEEGRVYLPQWMMETLGVNPGSLLQIASTDVPLGQFVKIEPQSVDFLDISDP 141
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKP---STAVSIIETDCEVDFIPPL 182
KAVLE LR +S LT D I + YN+K Y I V+E KP S ++ +IETD DF PP+
Sbjct: 142 KAVLENVLRKFSTLTVDDIIEINYNSKLYRIKVLEVKPESSSNSICVIETDLVTDFAPPV 201
Query: 183 DFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFS 242
+ EP+ RT ++P LD PS+ L + K +
Sbjct: 202 GYVEPD--------YRTEHRKSQKPKLD------PSAQGLGPMSQRIDYATSVKSTSTTR 247
Query: 243 PFTGSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNA 302
F G+G+ L+G+++ + + ++ + + A R G+L F
Sbjct: 248 AFVGTGQSLSGRTANK-----------SEERELERPMISLDNEPAPLRLPEGQLFF---- 292
Query: 303 NQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
G P VLPK +S + E+ +FQ G SLR
Sbjct: 293 -----GFPVVLPKKASDSQDENTEESQFQ---GAGQSLR 323
>gi|85110237|ref|XP_963330.1| hypothetical protein NCU06856 [Neurospora crassa OR74A]
gi|28881203|emb|CAD70384.1| related to ubiquitin fusion degradation protein [Neurospora crassa]
gi|28925006|gb|EAA34094.1| hypothetical protein NCU06856 [Neurospora crassa OR74A]
Length = 382
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 127/191 (66%), Gaps = 6/191 (3%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYP+ ++P L G KI++PPSALD+++ LH+++P++ EL N S G T+
Sbjct: 19 FDEYYRCYPLVMAPGAERPELNYGSKILLPPSALDKVSRLHVQWPIMLELINGSQGTHTH 78
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EF+A+EG Y+P WMM+ + L GD++++K SL VKLQP + +FLDIS+P+
Sbjct: 79 AGVLEFVAEEGRAYIPQWMMQTLKLDVGDMIQIKTTSLELARLVKLQPQSVNFLDISDPR 138
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTA---VSIIETDCEVDFIPPLD 183
AVLE R+++ LT GD YN++ Y + V++ KP TA V +IETD VDF PP+
Sbjct: 139 AVLEKAFRNFAALTKGDVFNFEYNDEIYEMAVLDVKPETAKMGVCMIETDVSVDFAPPVG 198
Query: 184 FKEPEKPSSSS 194
+ EP + + S
Sbjct: 199 YVEPSRQTQGS 209
>gi|336468599|gb|EGO56762.1| hypothetical protein NEUTE1DRAFT_111197 [Neurospora tetrasperma
FGSC 2508]
gi|350289128|gb|EGZ70353.1| UFD1-domain-containing protein [Neurospora tetrasperma FGSC 2509]
Length = 382
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 127/191 (66%), Gaps = 6/191 (3%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYP+ ++P L G KI++PPSALD+++ LH+++P++ EL N S G T+
Sbjct: 19 FDEYYRCYPLVMAPGAERPELNYGSKILLPPSALDKVSRLHVQWPIMLELINGSQGTHTH 78
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EF+A+EG Y+P WMM+ + L GD++++K SL VKLQP + +FLDIS+P+
Sbjct: 79 AGVLEFVAEEGRAYIPQWMMQTLKLDVGDMIQIKTTSLELARLVKLQPQSVNFLDISDPR 138
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTA---VSIIETDCEVDFIPPLD 183
AVLE R+++ LT GD YN++ Y + V++ KP TA V +IETD VDF PP+
Sbjct: 139 AVLEKAFRNFAALTKGDVFNFEYNDEIYEMAVLDVKPETAKMGVCMIETDVSVDFAPPVG 198
Query: 184 FKEPEKPSSSS 194
+ EP + + S
Sbjct: 199 YVEPSRQTQGS 209
>gi|150864151|ref|XP_001382865.2| ubiquitin fusion degradation protein I [Scheffersomyces stipitis
CBS 6054]
gi|149385407|gb|ABN64836.2| ubiquitin fusion degradation protein I [Scheffersomyces stipitis
CBS 6054]
Length = 362
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/186 (47%), Positives = 124/186 (66%), Gaps = 7/186 (3%)
Query: 10 FERKYRCYPISF----IDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
FE +RCYPI+ I K G KI +PPSAL++L LHI YPMLFELSN + T
Sbjct: 24 FEDYFRCYPIAMMADNIRKDDANFGGKIFLPPSALNKLTMLHIRYPMLFELSNEAQAVRT 83
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+ GV+EF+A+EG +Y+P WMM + + G ++++ N L GS+VK++P + DFLDIS+P
Sbjct: 84 HSGVLEFVAEEGRVYIPQWMMTTLKINPGGLLKISNCDLPLGSFVKIEPQSVDFLDISDP 143
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKP---STAVSIIETDCEVDFIPPL 182
KAVLE LR +S LT D I + YN+ + I V++ KP ST++ ++ETD E DF PP+
Sbjct: 144 KAVLENVLRKFSTLTVNDIIEINYNDSIFGIKVLDVKPKSDSTSICVVETDLETDFAPPV 203
Query: 183 DFKEPE 188
+ EPE
Sbjct: 204 GYVEPE 209
>gi|241951038|ref|XP_002418241.1| ubiquitin fusion degradation protein, putative [Candida
dubliniensis CD36]
gi|223641580|emb|CAX43541.1| ubiquitin fusion degradation protein, putative [Candida
dubliniensis CD36]
Length = 363
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/343 (37%), Positives = 175/343 (51%), Gaps = 42/343 (12%)
Query: 10 FERKYRCYPIS----FIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
FE +RCYPI+ I K G KI +PPSAL++L LHI YPMLFE+ N ++T
Sbjct: 24 FEEYFRCYPIAMMPDLIRKDDANYGGKIFLPPSALNKLTMLHIRYPMLFEIKNEQNEKLT 83
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+ GV+EF A+EG YLP WMM + L G ++++ N L G +VK++P + DFLDIS+P
Sbjct: 84 HSGVLEFTAEEGRTYLPQWMMNTLELSPGSLIKITNCDLNLGKFVKIEPQSVDFLDISDP 143
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETK---PSTAVSIIETDCEVDFIPPL 182
KAVLE LR +S LT D I V YN+ Y I V+E K PS V ++ETD E DF PP+
Sbjct: 144 KAVLENVLRKFSTLTVNDVIEVNYNDAIYGIKVLEVKPESPSKGVCVVETDLETDFAPPV 203
Query: 183 DFKEPE-KPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIA-- 239
+ EPE KP + + P+D P K + S+ + + K +A
Sbjct: 204 GYVEPEYKPKTVE---------PQSTPID---PSKVNKSAGAATMAKSINYA--KLVAEG 249
Query: 240 -KFSPFTGSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVF 298
K + F+GSG+ L+GKS +D Q I+ + +
Sbjct: 250 GKTTKFSGSGQKLSGKSID----------MDKDQTTKNYRIDDLDPDAVP-------VPL 292
Query: 299 GSNANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
NQ G P VLP + EE K +AF+G SLR
Sbjct: 293 TLPENQLFFGFPVVLPTQEEIDEGTKEELRKQEAFSGSGQSLR 335
>gi|68481468|ref|XP_715373.1| hypothetical protein CaO19.5833 [Candida albicans SC5314]
gi|68481599|ref|XP_715308.1| hypothetical protein CaO19.13255 [Candida albicans SC5314]
gi|46436925|gb|EAK96280.1| hypothetical protein CaO19.13255 [Candida albicans SC5314]
gi|46436993|gb|EAK96347.1| hypothetical protein CaO19.5833 [Candida albicans SC5314]
Length = 363
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 107/255 (41%), Positives = 150/255 (58%), Gaps = 21/255 (8%)
Query: 10 FERKYRCYPIS----FIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
FE +RCYPI+ I K G KI +PPSAL++L LHI YPMLFE+ N ++T
Sbjct: 24 FEEYFRCYPIAMMPDLIRKDDANYGGKIFLPPSALNKLTMLHIRYPMLFEIKNEQNEKLT 83
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+ GV+EFIA+EG YLP WMM + L G ++++ N L G +VK++P + DFLDIS+P
Sbjct: 84 HSGVLEFIAEEGRTYLPQWMMNTLELTPGSLIKITNCDLNLGKFVKIEPQSVDFLDISDP 143
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKP---STAVSIIETDCEVDFIPPL 182
KAVLE LR +S LT D I V YN+ Y I V+E KP S + ++ETD E DF P +
Sbjct: 144 KAVLENVLRKFSTLTVNDIIEVNYNDAIYGIRVLEVKPDSTSKGICVVETDLETDFAPLV 203
Query: 183 DFKEPE-KPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVK-EEPPKKIAK 240
+ EPE KP + S++ P+D P K + S+ + + + + K
Sbjct: 204 GYVEPEYKPKTVEPSSK---------PID---PSKVNKSAGAATMAKSINYAKLVAEAGK 251
Query: 241 FSPFTGSGRCLNGKS 255
+ F+GSG+ L+GKS
Sbjct: 252 TTKFSGSGQKLSGKS 266
>gi|149248356|ref|XP_001528565.1| ubiquitin fusion degradation protein 1 [Lodderomyces elongisporus
NRRL YB-4239]
gi|146448519|gb|EDK42907.1| ubiquitin fusion degradation protein 1 [Lodderomyces elongisporus
NRRL YB-4239]
Length = 365
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/191 (48%), Positives = 122/191 (63%), Gaps = 8/191 (4%)
Query: 10 FERKYRCYPISF----IDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
FE +RCYP+S I K G KI +PPSAL +L LHI YP+LFEL N T
Sbjct: 25 FEEYFRCYPVSMMPDMIRKDDANYGGKIFLPPSALQKLTMLHIRYPILFELKNEQQDITT 84
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+ GV+EFIA+EG Y+P WMM + LQ G +V++ N L G +VK++P + DFLDIS+P
Sbjct: 85 HSGVLEFIAEEGRCYIPQWMMNTLQLQPGSLVKINNCDLELGKFVKIEPQSVDFLDISDP 144
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTA---VSIIETDCEVDFIPPL 182
KAVLE LR +S LT D I + YN+ Y I V+E KP ++ + ++ETD E DF PP+
Sbjct: 145 KAVLENVLRKFSTLTVNDVIEINYNDSVYGIKVLEVKPESSGHGICVVETDLETDFAPPV 204
Query: 183 DFKEPE-KPSS 192
+ EPE KP S
Sbjct: 205 GYVEPEYKPKS 215
>gi|389638364|ref|XP_003716815.1| ubiquitin fusion degradation protein 1 [Magnaporthe oryzae 70-15]
gi|351642634|gb|EHA50496.1| ubiquitin fusion degradation protein 1 [Magnaporthe oryzae 70-15]
gi|440474647|gb|ELQ43377.1| ubiquitin fusion degradation protein 1 [Magnaporthe oryzae Y34]
gi|440480486|gb|ELQ61146.1| ubiquitin fusion degradation protein 1 [Magnaporthe oryzae P131]
Length = 379
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 127/191 (66%), Gaps = 6/191 (3%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYP+ + ++P L +G KI++PPSAL++++ LH+++P+L EL N + T+
Sbjct: 17 FDEYYRCYPMIMVPGAERPELNHGSKIILPPSALEKVSKLHVQWPLLMELINGENDKHTH 76
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EF+A+EG YLP WMM+ + L GD++++K+ SL VKLQP + FLDIS+P+
Sbjct: 77 SGVLEFVAEEGRAYLPQWMMQTLQLDVGDMIQIKSTSLELARMVKLQPQSAKFLDISDPR 136
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIPPLD 183
AVLE R+++ LT GD YN+ Y + V++ KP T VS+IETD VDF P+
Sbjct: 137 AVLEKAFRNFATLTKGDVFSFEYNDDVYEMAVLDVKPETTKMGVSMIETDVSVDFAAPVG 196
Query: 184 FKEPEKPSSSS 194
+ EPE+ + S
Sbjct: 197 YVEPERQAKGS 207
>gi|171690272|ref|XP_001910061.1| hypothetical protein [Podospora anserina S mat+]
gi|170945084|emb|CAP71195.1| unnamed protein product [Podospora anserina S mat+]
Length = 437
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 125/186 (67%), Gaps = 6/186 (3%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYP+ ++P L G KI +PPSALD+++ LH+++P++ EL N + G+ T+
Sbjct: 75 FDEYYRCYPLVMAPGAERPELNYGSKIFLPPSALDKVSRLHVQWPIMLELINGAEGKHTH 134
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EF+A+EG Y+P WMM+ + L GD++++K SL VKLQP + +FLDIS+P+
Sbjct: 135 AGVLEFVAEEGRAYVPQWMMQTLKLDVGDMIQIKTTSLELAKLVKLQPQSVNFLDISDPR 194
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIPPLD 183
AVLE R+++ LT GD YN++ Y + V+E KP T V +IETD VDF PP+
Sbjct: 195 AVLEKAFRNFATLTKGDVFNFEYNDEIYEMAVLEVKPETDKMGVCMIETDVSVDFAPPVG 254
Query: 184 FKEPEK 189
+ EPE+
Sbjct: 255 YVEPER 260
>gi|324519112|gb|ADY47288.1| Ubiquitin fusion degradation protein 1 [Ascaris suum]
Length = 322
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 105/260 (40%), Positives = 146/260 (56%), Gaps = 28/260 (10%)
Query: 10 FERKYRCYPISFIDKP------HLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSA-G 62
F+ + RC+ F + L +G KI++PPSALD L L+IEYPM+F++S+ +
Sbjct: 17 FDMQLRCFSAPFYGRADSDKINELNHGGKILLPPSALDLLVRLNIEYPMMFKVSSINEPQ 76
Query: 63 RVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDI 122
R T+CGV+EF+A+EG YLP WMM + L EGD + V +SL +Y K +P + DFL I
Sbjct: 77 RFTHCGVLEFLAEEGRCYLPSWMMRQLHLSEGDCIRVTYSSLPSATYAKFKPQSTDFLAI 136
Query: 123 SNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPL 182
SNP+A+LE LR ++CLT GD I V YN + V+E KP AV+IIE D V+F P
Sbjct: 137 SNPRAMLEVELRKFACLTKGDVIAVQYNEQLLEFLVMEVKPGNAVAIIECDMNVEFDAPE 196
Query: 183 DFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFS 242
+ EP +SS S + P P KG PS KF+
Sbjct: 197 GYVEPSVSGASSTSTK--PSAPPRVPSVGKGLVAPSEK-------------------KFT 235
Query: 243 PFTGSGRCLNGKSSTQPTVS 262
FTGSG L+GK+ +Q +++
Sbjct: 236 AFTGSGHRLDGKTKSQTSLA 255
>gi|358399671|gb|EHK49008.1| hypothetical protein TRIATDRAFT_297743 [Trichoderma atroviride IMI
206040]
Length = 368
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 122/342 (35%), Positives = 186/342 (54%), Gaps = 37/342 (10%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYP+ ++P L G KI++PPSALD+++ LH+++P+L E+ N G+ ++
Sbjct: 23 FDEYYRCYPVIMAPGSERPELNYGSKIILPPSALDKVSKLHVQWPLLMEMINGEKGKHSH 82
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EFIA+EG Y+P WMM + L GD+++++ SL VKLQP + +FL+IS+PK
Sbjct: 83 AGVLEFIAEEGRAYIPQWMMVTLGLDVGDMIQIRTTSLELARMVKLQPQSVNFLEISDPK 142
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIPPLD 183
AVLE R+++ LT GD YN+ Y + V++ KP T VS+IETD V+F P+
Sbjct: 143 AVLEKAFRNFATLTKGDIFNFEYNDDVYDVAVLDVKPETDKMGVSMIETDVSVEFAAPVG 202
Query: 184 FKEPEKPSSSSLSNRTLPEVKEEPPLDFKG--PEKPSSSSLSNRTPPEVKEEPPKKIAKF 241
+ EPEK S +S T+ V L +G + + SS++ P V P
Sbjct: 203 YVEPEKKSGTSTPRSTMGGVPAGGILHSQGTMAQAINYSSIA----PSVTSVP------- 251
Query: 242 SPFTGSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSS-ASSRQKSGKLVFGS 300
+ F G G+ + K S T P++P+ P + A + ++ + A R KL FG
Sbjct: 252 TNFLGEGQRVVKKGSKTATPKPATPV---PVETTA--VPKKRTGAPAPLRLSPNKLFFGY 306
Query: 301 NANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
++ P + E Q E+ PK Q F G+ SLRG
Sbjct: 307 ----------ELKPLKTDAEKAQ-EKAPK-QHFAGQGQSLRG 336
>gi|344234539|gb|EGV66407.1| UFD1-domain-containing protein [Candida tenuis ATCC 10573]
Length = 356
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 92/193 (47%), Positives = 127/193 (65%), Gaps = 8/193 (4%)
Query: 10 FERKYRCYPISF----IDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
FE +RCYPI+ I K G KI +P SAL++L+ LHI YPMLFEL N + + T
Sbjct: 22 FEDYFRCYPIAMMPDSIRKDDANYGGKIFLPSSALNKLSMLHIRYPMLFELLNETTQKKT 81
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+ G++EF+A+EG YLP WMM + LQ G +V++ N L G +VK++P + DFL+IS+P
Sbjct: 82 HSGILEFVAEEGRAYLPQWMMSTLELQPGQLVQISNCDLPLGRFVKIEPQSVDFLEISDP 141
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTA---VSIIETDCEVDFIPPL 182
KAVLE LR +S LT D I + YN+ Y I V+ETKP ++ + ++ETD E DF PP+
Sbjct: 142 KAVLENVLRRFSTLTVDDIIEINYNDTIYGIKVLETKPESSGQGICVVETDLETDFAPPV 201
Query: 183 DFKEPE-KPSSSS 194
+ EPE KP S +
Sbjct: 202 GYVEPEYKPKSQA 214
>gi|448513555|ref|XP_003866984.1| Ufd1 protein [Candida orthopsilosis Co 90-125]
gi|380351322|emb|CCG21546.1| Ufd1 protein [Candida orthopsilosis Co 90-125]
Length = 368
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 123/191 (64%), Gaps = 8/191 (4%)
Query: 10 FERKYRCYPIS----FIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
FE +RCYPI+ + K G KI +PPSAL++L LHI YPMLFEL N +T
Sbjct: 25 FEEYFRCYPIAMMPDLVRKDDANFGGKIFLPPSALNKLTMLHIRYPMLFELRNEQKDLLT 84
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+ GV+EF ++EG Y+P WM + + LQ G +++VKN L G +VK++P + DFLDIS+P
Sbjct: 85 HSGVLEFTSEEGRCYIPQWMTDTLKLQPGGLIKVKNCDLNLGKFVKIEPQSVDFLDISDP 144
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIPPL 182
KAVLE LR +S LT D I V YN+ Y I V+E KP + + ++ETD E DF PP+
Sbjct: 145 KAVLENVLRKFSTLTVNDVIEVNYNDSIYGIKVLEVKPESDNHGICVVETDLETDFAPPV 204
Query: 183 DFKEPE-KPSS 192
+ EPE KP S
Sbjct: 205 GYVEPEYKPKS 215
>gi|320585930|gb|EFW98609.1| ubiquitin fusion degradation protein [Grosmannia clavigera kw1407]
Length = 380
Score = 187 bits (475), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 124/191 (64%), Gaps = 6/191 (3%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYP+ ++P L G KI++PPSALD+++ LH+++P+L EL N G+ ++
Sbjct: 25 FDEFYRCYPMVMAPGSERPELNYGSKILLPPSALDKVSRLHVQWPLLMELVNAEKGKHSH 84
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
CGV+EF+A+EG YLP WMME + L GD++++K SL VKLQP + FL+IS+PK
Sbjct: 85 CGVLEFVAEEGRAYLPQWMMETLRLDVGDMIQIKTTSLELARMVKLQPQSPAFLEISDPK 144
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIPPLD 183
AVLE R+++ LT GD YN Y + V+E KP + VS++ETD V+F P+
Sbjct: 145 AVLERAFRNFASLTKGDIFNFEYNGDVYGVAVLEVKPESEKMGVSMLETDVSVEFEAPVG 204
Query: 184 FKEPEKPSSSS 194
+ EPE+ S
Sbjct: 205 YVEPERVKGSG 215
>gi|341038918|gb|EGS23910.1| putative ubiquitin fusion degradation protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 368
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 125/186 (67%), Gaps = 6/186 (3%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYPI ++P L G KI +PPSAL++++ LH+++P++ EL N + GR T+
Sbjct: 25 FDEYYRCYPIIMAPGAERPELNYGSKIFLPPSALEKVSKLHVQWPIMLELINGAKGRHTH 84
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EF+A+EG Y+P WMM+ + L GD+++VK SL VKLQP +FL+IS+P+
Sbjct: 85 AGVLEFVAEEGRAYIPQWMMQTLQLDVGDMIQVKTTSLELAQMVKLQPQDVNFLEISDPR 144
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIPPLD 183
AVLE R+++ LT GD YN++ Y + V++ KP T VS+IETD V+F PP+
Sbjct: 145 AVLERVFRNFAALTKGDVFNFEYNDEIYEVAVLDVKPETEKMGVSMIETDVSVEFAPPVG 204
Query: 184 FKEPEK 189
+ EPE+
Sbjct: 205 YVEPER 210
>gi|156848135|ref|XP_001646950.1| hypothetical protein Kpol_2000p59 [Vanderwaltozyma polyspora DSM
70294]
gi|156117632|gb|EDO19092.1| hypothetical protein Kpol_2000p59 [Vanderwaltozyma polyspora DSM
70294]
Length = 352
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 125/192 (65%), Gaps = 7/192 (3%)
Query: 10 FERKYRCYPISF----IDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
FE +RCYPIS I K G KI +PPSAL++L L+I YPMLFEL G++T
Sbjct: 20 FESFFRCYPISMMNDRIRKDDANYGGKIFLPPSALNKLTMLNIRYPMLFELMANENGKIT 79
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+ GV+EFIA+EG YLP WMME + ++ G ++++ + GSYV ++P + DFLDIS+P
Sbjct: 80 HGGVLEFIAEEGRTYLPNWMMETLDVKPGSLLKISTIDIPLGSYVNIEPQSVDFLDISDP 139
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETK---PSTAVSIIETDCEVDFIPPL 182
KAVLE LR++S LT D I + YNNK Y I ++E K PS + +IETD DF PP+
Sbjct: 140 KAVLENVLRNFSTLTINDIIEISYNNKIYRIKILEVKPESPSKGICVIETDLITDFAPPV 199
Query: 183 DFKEPEKPSSSS 194
+ EP+ S ++
Sbjct: 200 GYVEPDYRSEAA 211
>gi|363747898|ref|XP_003644167.1| hypothetical protein Ecym_1094 [Eremothecium cymbalariae
DBVPG#7215]
gi|356887799|gb|AET37350.1| hypothetical protein Ecym_1094 [Eremothecium cymbalariae
DBVPG#7215]
Length = 349
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 129/197 (65%), Gaps = 7/197 (3%)
Query: 10 FERKYRCYPISF----IDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
FE +RCYPI I K G KI +PPS+L++L+ L+I YPMLF+LS+ +G+VT
Sbjct: 19 FEDFFRCYPIGMMNERIRKDDANYGGKIFLPPSSLNKLSMLNIRYPMLFKLSSQESGKVT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+ GV+EFIA+EG YLP WMME + +Q G ++++ + + +G VK++P + DFLDIS+P
Sbjct: 79 HGGVLEFIAEEGRAYLPGWMMETLGVQPGSLLKIASTDMPQGQVVKIEPQSVDFLDISDP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIPPL 182
KAVLE LR +S LT D I + YNN+ Y I V+E KP ++ +IETD +F PP+
Sbjct: 139 KAVLENVLRKFSTLTINDIIEISYNNRIYRIKVLEVKPHAPCNSICVIETDLVTEFAPPV 198
Query: 183 DFKEPEKPSSSSLSNRT 199
+ EP+ + S RT
Sbjct: 199 GYVEPDYQAQQSQIKRT 215
>gi|294659350|ref|XP_461717.2| DEHA2G03938p [Debaryomyces hansenii CBS767]
gi|199433895|emb|CAG90169.2| DEHA2G03938p [Debaryomyces hansenii CBS767]
Length = 361
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/266 (39%), Positives = 152/266 (57%), Gaps = 35/266 (13%)
Query: 10 FERKYRCYPISF----IDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
FE +R YP++ I K G KI +P SAL++L LHI YPMLFELSN ++G T
Sbjct: 22 FEDYFRSYPVAMMPDHIRKDDANYGGKIFLPSSALNKLTMLHIRYPMLFELSNEASGVTT 81
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+ GV+EF+A+EG YLP WMM + L G ++++ N L G++VK++P + DFLDIS+P
Sbjct: 82 HSGVLEFVAEEGRAYLPQWMMSTLQLSPGSLLKISNCDLPLGNFVKIEPQSVDFLDISDP 141
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKP---STAVSIIETDCEVDFIPPL 182
KAVLE LR++S LT D I + YN+ + I V+E KP S + ++ETD E DF PP+
Sbjct: 142 KAVLENVLRNFSTLTVNDIIEINYNDSIFGIKVLEAKPESSSRGICVVETDLETDFAPPV 201
Query: 183 DFKEPE------KPSSSSLS----NRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKE 232
+ EPE KP+++++ NR+ L++ SS+ P K
Sbjct: 202 GYVEPEYKPQAKKPTTNAIDPSSVNRSAGAGTMAKSLNYANLVAESSN-------PATKA 254
Query: 233 EPPKKIAKFSPFTGSGRCLNGKSSTQ 258
F GSG+ L+GK +T+
Sbjct: 255 -----------FQGSGQSLSGKPTTE 269
>gi|408399732|gb|EKJ78825.1| hypothetical protein FPSE_00968 [Fusarium pseudograminearum CS3096]
Length = 380
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/344 (33%), Positives = 182/344 (52%), Gaps = 38/344 (11%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYP+ ++P L G KI++PPSALD+++ LH+++P+L EL N G ++
Sbjct: 32 FDEYYRCYPLVMAPGSERPELNYGSKIILPPSALDKVSKLHVQWPLLMELINGEKGLHSH 91
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EFIA+EG Y+P WMM + + GD+++++ SL VKLQP + +FL+IS+PK
Sbjct: 92 AGVLEFIAEEGRAYIPQWMMVTLGMDVGDMIQIRTTSLELAKMVKLQPQSVNFLEISDPK 151
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIPPLD 183
AVLE R+++ LT GD YN++ Y + V++ KP T VS+IETD V+F PP+
Sbjct: 152 AVLEKAFRNFATLTKGDVFNFSYNDEVYDVAVLDVKPETDKMGVSMIETDVSVEFAPPVG 211
Query: 184 FKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPS--SSSLSNRTPPEVKEEPPKKIAKF 241
+ EPE+ S +S T L +G S S+++ P +
Sbjct: 212 YVEPERQSGTSTPRSTRGGAPAGGLLHNQGTMAQSINYSAIA-----------PSVTSNV 260
Query: 242 SPFTGSGRCLNGKSSTQPTVSPSSPL--IDNPQQNAANGINGSKSSS-ASSRQKSGKLVF 298
+ F G G+ L KSS T P++P+ +D P G+ + + A+ R KL F
Sbjct: 261 TNFLGEGQKLVKKSSKASTPKPATPVPTVDIP------GMPKRRDGAPAALRLAPNKLFF 314
Query: 299 GSNANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
G ++ P + + + +E F G+ +LRG
Sbjct: 315 GY----------EIKPVKTDADKEKEKEGANRPHFAGQGQTLRG 348
>gi|366999618|ref|XP_003684545.1| hypothetical protein TPHA_0B04420 [Tetrapisispora phaffii CBS 4417]
gi|357522841|emb|CCE62111.1| hypothetical protein TPHA_0B04420 [Tetrapisispora phaffii CBS 4417]
Length = 354
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 88/186 (47%), Positives = 127/186 (68%), Gaps = 7/186 (3%)
Query: 10 FERKYRCYPISFI-DKPHLENGD---KIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
FE +RCYPIS + D+ ++ + KI +PPSAL++L L+I YPMLFEL++ G+VT
Sbjct: 24 FESFFRCYPISMMNDRIRKDDANFWGKIFLPPSALNKLTMLNIRYPMLFELTSNETGKVT 83
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+ GV+EF A+EG +YLP WMME + ++ G ++ + + GSYV L+P + DFLDIS+P
Sbjct: 84 HGGVLEFTAEEGRVYLPQWMMETLSVKAGSLLTIATTDIPLGSYVNLEPQSTDFLDISDP 143
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIPPL 182
KAVLE +LR++S LT D I + YNNK Y I ++E KP + + +IETD DF PP+
Sbjct: 144 KAVLENSLRNFSTLTKDDIIEISYNNKIYRIKILEVKPESPLHGICVIETDLVTDFAPPV 203
Query: 183 DFKEPE 188
+ EP+
Sbjct: 204 GYVEPD 209
>gi|254565829|ref|XP_002490025.1| Protein that interacts with Cdc48p and Npl4p, involved in
recognition of polyubiquitinated proteins [Komagataella
pastoris GS115]
gi|238029821|emb|CAY67744.1| Protein that interacts with Cdc48p and Npl4p, involved in
recognition of polyubiquitinated proteins [Komagataella
pastoris GS115]
gi|328350431|emb|CCA36831.1| Ubiquitin fusion degradation protein 1 [Komagataella pastoris CBS
7435]
Length = 351
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 90/194 (46%), Positives = 125/194 (64%), Gaps = 7/194 (3%)
Query: 2 YENHHDAAFERKYRCYPISFIDKPHLEN----GDKIVMPPSALDRLAYLHIEYPMLFELS 57
+ + FE +RCYP+S + G KI +PPS L +L LHI YPMLFEL+
Sbjct: 10 FRAQQASGFEDYFRCYPVSMMPSSSSREVANFGGKIFLPPSTLHKLTMLHISYPMLFELT 69
Query: 58 NTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTK 117
N GR T+ GV+EF+A+EG YLP WMM + +Q G ++++KN L GS+VK++P +
Sbjct: 70 NQETGRSTHSGVLEFLAEEGRCYLPQWMMSTLGIQTGGLLKIKNCDLPLGSFVKIEPQSV 129
Query: 118 DFLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKP---STAVSIIETDC 174
DFL+IS+PKAVLE LR+++ LT D + V YNNK + I V+E KP S + +IETD
Sbjct: 130 DFLEISDPKAVLENVLRNFTTLTVDDIVEVSYNNKVFGIKVLEVKPESSSHGICVIETDL 189
Query: 175 EVDFIPPLDFKEPE 188
E DF PP+ + EP+
Sbjct: 190 ETDFAPPVGYVEPD 203
>gi|156085254|ref|XP_001610110.1| ubiquitin fusion degradation protein [Babesia bovis T2Bo]
gi|154797362|gb|EDO06542.1| ubiquitin fusion degradation protein, putative [Babesia bovis]
Length = 258
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 123/169 (72%)
Query: 10 FERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGV 69
F +YRCYP+SF+ K +E+G+KI MP SAL+ LA +I +PM+FEL N R T+ GV
Sbjct: 23 FLVRYRCYPVSFLGKDAMESGNKICMPASALNELASRNITWPMMFELRNEERKRSTHAGV 82
Query: 70 MEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVL 129
+EFI++EG+ ++PYWMM+++ LQEGD + ++N L K ++VK +P ++ DISNPKAVL
Sbjct: 83 LEFISEEGMCHIPYWMMQHLQLQEGDYLTIRNVRLPKANWVKFRPLNDNYWDISNPKAVL 142
Query: 130 ETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDF 178
ET LR+++ LT GD I + Y + Y ++V++ +P+ A IIETD EV+F
Sbjct: 143 ETALRNFATLTIGDRIPIHYLSNVYELDVMDLRPADACCIIETDMEVEF 191
>gi|190346739|gb|EDK38899.2| hypothetical protein PGUG_02997 [Meyerozyma guilliermondii ATCC
6260]
Length = 354
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 121/189 (64%), Gaps = 7/189 (3%)
Query: 7 DAAFERKYRCYPISF----IDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAG 62
+ FE +RCYP++ I K G KI +PPSAL++L LHI YPMLFEL N +
Sbjct: 20 NTKFEDYFRCYPVAMMPDNIRKDDANFGGKIFLPPSALNKLTMLHIRYPMLFELENEAES 79
Query: 63 RVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDI 122
T+ GV+EF+A+EG YLP WMM + + G ++++ N L GS+VK++P + DFLDI
Sbjct: 80 VKTHSGVLEFVAEEGRAYLPQWMMATLNVSPGSLLKISNCDLPLGSFVKIEPQSVDFLDI 139
Query: 123 SNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKP---STAVSIIETDCEVDFI 179
S+PKAVLE LR +S LT D I + YN+ Y I V+E KP S + ++ETD + DF
Sbjct: 140 SDPKAVLENVLRKFSTLTVNDIIEINYNDATYGIKVLEAKPESSSQGICVVETDLQTDFA 199
Query: 180 PPLDFKEPE 188
PP+ + EPE
Sbjct: 200 PPVGYVEPE 208
>gi|346323582|gb|EGX93180.1| ubiquitin fusion degradation protein [Cordyceps militaris CM01]
Length = 463
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 83/191 (43%), Positives = 128/191 (67%), Gaps = 6/191 (3%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYP+ ++P L G KI++PPSALD+++ LH+++P+ EL N GR ++
Sbjct: 117 FDEYYRCYPVIMAPGNERPELNYGSKILLPPSALDKVSKLHVQWPLQMELINGEKGRHSH 176
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EFIA+EG Y+P WMME + ++ GD+++++ L VKLQP + +FL+IS+PK
Sbjct: 177 AGVLEFIAEEGRAYIPQWMMETLGMEVGDMIQIRTTLLELAKLVKLQPQSTNFLEISDPK 236
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIPPLD 183
AVLE R+++ LT GD YN++ Y + V++ +P T VS+IETD V+F PP+
Sbjct: 237 AVLERAFRNFATLTKGDVFNFAYNDEVYDVAVLDVQPETDKMGVSMIETDVSVEFAPPVG 296
Query: 184 FKEPEKPSSSS 194
+ EPE+ S +S
Sbjct: 297 YVEPERNSGTS 307
>gi|73535905|pdb|1ZC1|A Chain A, Ufd1 Exhibits The Aaa-Atpase Fold With Two Distinct
Ubiquitin Interaction Sites
Length = 208
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/187 (47%), Positives = 125/187 (66%), Gaps = 7/187 (3%)
Query: 9 AFERKYRCYPISF----IDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRV 64
FE +RCYPI+ I K G KI +PPSAL +L+ L+I YPMLF+L+ GRV
Sbjct: 20 TFEEFFRCYPIAMMNDRIRKDDANFGGKIFLPPSALSKLSMLNIRYPMLFKLTANETGRV 79
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
T+ GV+EFIA+EG +YLP WMME + +Q G ++++ + + G +VKL+P + DFLDIS+
Sbjct: 80 THGGVLEFIAEEGRVYLPQWMMETLGIQPGSLLQISSTDVPLGQFVKLEPQSVDFLDISD 139
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKP---STAVSIIETDCEVDFIPP 181
PKAVLE LR++S LT D I + YN K + I ++E KP S ++ +IETD DF PP
Sbjct: 140 PKAVLENVLRNFSTLTVDDVIEISYNGKTFKIKILEVKPESSSKSICVIETDLVTDFAPP 199
Query: 182 LDFKEPE 188
+ + EP+
Sbjct: 200 VGYVEPD 206
>gi|365983948|ref|XP_003668807.1| hypothetical protein NDAI_0B05310 [Naumovozyma dairenensis CBS 421]
gi|343767574|emb|CCD23564.1| hypothetical protein NDAI_0B05310 [Naumovozyma dairenensis CBS 421]
Length = 361
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 87/187 (46%), Positives = 127/187 (67%), Gaps = 7/187 (3%)
Query: 9 AFERKYRCYPISF----IDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRV 64
FE +RCYPI I K G KI +PPSAL++L+ L+I YPMLF+L+ + +G++
Sbjct: 20 TFEEYFRCYPIVMMNDRIRKDDANYGGKIFLPPSALNKLSMLNIRYPMLFQLTASESGKM 79
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
T+ GV+EF A+EG +YLP WMM+ + +Q G ++++ + + G +VK++P + DFLDIS+
Sbjct: 80 THGGVLEFTAEEGRVYLPQWMMQTLNVQPGSLLKIDSTDVPLGQFVKIEPQSTDFLDISD 139
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKP---STAVSIIETDCEVDFIPP 181
PKAVLE LR++S LT D I + YNNK Y I V+E KP S ++ +IETD DF PP
Sbjct: 140 PKAVLENVLRNFSTLTVDDIIEISYNNKIYGIKVLEVKPESSSRSICVIETDLVTDFAPP 199
Query: 182 LDFKEPE 188
+ + EP+
Sbjct: 200 VGYVEPD 206
>gi|146418605|ref|XP_001485268.1| hypothetical protein PGUG_02997 [Meyerozyma guilliermondii ATCC
6260]
Length = 354
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 114/284 (40%), Positives = 156/284 (54%), Gaps = 35/284 (12%)
Query: 7 DAAFERKYRCYPISF----IDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAG 62
+ FE +RCYP++ I K G KI +PPSAL++L LHI YPMLFEL N +
Sbjct: 20 NTKFEDYFRCYPVAMMPDNIRKDDANFGGKIFLPPSALNKLTMLHIRYPMLFELENEAES 79
Query: 63 RVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDI 122
T+ GV+EF+A+EG YLP WMM + + G ++++ N L GS+VK++P + DFLDI
Sbjct: 80 VKTHSGVLEFVAEEGRAYLPQWMMATLNVSPGLLLKISNCDLPLGSFVKIEPQSVDFLDI 139
Query: 123 SNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKP---STAVSIIETDCEVDFI 179
S+PKAVLE LR +S LT D I + YN+ Y I V+E KP S + ++ETD + DF
Sbjct: 140 SDPKAVLENVLRKFSTLTVNDIIEINYNDATYGIKVLEAKPESSSQGICVVETDLQTDFA 199
Query: 180 PPLDFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPE-KPSSSSLSNRTPPEVKEEPPKKI 238
PP+ + EPE P VKE P+ KP + S NR
Sbjct: 200 PPVGYVEPEYK----------PAVKE--------PQSKPITPSSVNRGVGAGTMANSINY 241
Query: 239 AKF------SPFTGSGRCLNGKSSTQPTVSPSSPLIDNPQQNAA 276
AK + F GSG+ L+GK S + T + S +D+ NAA
Sbjct: 242 AKIVAEQSNNTFKGSGQKLSGKPSQEATKTIS---MDDLDPNAA 282
>gi|406602377|emb|CCH46086.1| Ubiquitin fusion degradation protein 1 [Wickerhamomyces ciferrii]
Length = 320
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 100/230 (43%), Positives = 137/230 (59%), Gaps = 15/230 (6%)
Query: 30 GDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENM 89
G KI +PPSAL+RL LHI YPMLFEL N G T+ GV+EF+A+EG +YLP WMM +
Sbjct: 14 GGKIFLPPSALNRLTMLHIRYPMLFELKNEDQGLKTHSGVLEFVAEEGRVYLPQWMMSTL 73
Query: 90 LLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDTIMVPY 149
L+ G I+++ N+ + G +VK++P + DFLDIS+PKAVLE LR +S L+ D I + Y
Sbjct: 74 QLKPGAIIKITNSDVPLGKFVKIEPQSVDFLDISDPKAVLENVLRKFSTLSVNDIIEINY 133
Query: 150 NNKKYYINVVETKP---STAVSIIETDCEVDFIPPLDFKEPEKPSSSSLSNRTLPEVKEE 206
N+K Y I V+E KP S ++ +IETD E DF PP+ + EP+ S T + KE
Sbjct: 134 NDKIYGIKVLEAKPESDSNSICVIETDLETDFAPPVGYVEPD------YSKNTTSKSKES 187
Query: 207 PPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTGSGRCLNGKSS 256
P + S++ KE K + S F G G L+GK+S
Sbjct: 188 AKPSAGKPLGTMAKSIN------YKELAQKASQEISSFKGDGVKLSGKAS 231
>gi|320582932|gb|EFW97149.1| ubiquitin fusion degradation protein 1 [Ogataea parapolymorpha
DL-1]
Length = 367
Score = 183 bits (465), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 86/187 (45%), Positives = 123/187 (65%), Gaps = 7/187 (3%)
Query: 9 AFERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRV 64
F+ +RCYPI+ + K G KI +P SAL +L LHI YPMLF +++ S+G+
Sbjct: 29 GFDDYFRCYPIAMMPDVSRKDDANYGGKIFLPQSALHKLTMLHIRYPMLFTITSESSGKS 88
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
T+ GV+EF A+EG YLP WM++ + + G +V +K A L +GS+V L+P + DFLDIS+
Sbjct: 89 THSGVLEFTAEEGRCYLPQWMLDTIAAEPGSLVNIKTADLPQGSFVMLEPQSVDFLDISD 148
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKP---STAVSIIETDCEVDFIPP 181
PKAVLE LR ++ LT GD I + YN++ Y I ++E KP S + +IETD E DF PP
Sbjct: 149 PKAVLENALRKFTTLTVGDIIELDYNDQIYKIKILEVKPESSSHGICVIETDLETDFAPP 208
Query: 182 LDFKEPE 188
+ + EP+
Sbjct: 209 VGYVEPD 215
>gi|45199181|ref|NP_986210.1| AFR662Cp [Ashbya gossypii ATCC 10895]
gi|44985321|gb|AAS54034.1| AFR662Cp [Ashbya gossypii ATCC 10895]
gi|374109443|gb|AEY98349.1| FAFR662Cp [Ashbya gossypii FDAG1]
Length = 350
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/253 (39%), Positives = 153/253 (60%), Gaps = 19/253 (7%)
Query: 10 FERKYRCYPISF----IDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
FE +RCYPI I K G KI +PPSAL++L+ L+I YPMLF+LS+ G+VT
Sbjct: 19 FEDFFRCYPIEMMNDRIRKEDANYGGKIFLPPSALNKLSMLNIRYPMLFKLSSQETGKVT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+ GV+EF+A+EG YLP WMM + + G ++ + + + +G +VK++P + DFLDIS+P
Sbjct: 79 HGGVLEFVAEEGRAYLPGWMMATLGVNPGSLLRISSTDVPQGQFVKIEPQSVDFLDISDP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIPPL 182
KAVLE LR +S LT D I + YN + Y I V+E KP + ++ +IETD DF PP+
Sbjct: 139 KAVLENVLRKFSTLTVDDIIEISYNKRIYRIRVLEVKPESECKSICVIETDLVTDFAPPV 198
Query: 183 DFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTP-PEVKEEPPKKIAKF 241
+ EP+ ++++ + R K++ +D P S+ ++S R ++ +E + F
Sbjct: 199 GYVEPDYQAANNNTQR-----KKKNTVD---PASVSNGTMSRRIKYADIVKEAEQSATSF 250
Query: 242 SPFTGSGRCLNGK 254
+ G G L+GK
Sbjct: 251 A---GEGHKLSGK 260
>gi|170596976|ref|XP_001902965.1| Ubiquitin fusion degradation protein UFD1 containing protein
[Brugia malayi]
gi|158589018|gb|EDP28183.1| Ubiquitin fusion degradation protein UFD1 containing protein
[Brugia malayi]
Length = 320
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/258 (40%), Positives = 147/258 (56%), Gaps = 31/258 (12%)
Query: 10 FERKYRCYPISFIDKP------HLENGDKIVMPPSALDRLAYLHIEYPMLFELSN-TSAG 62
F+ + RC+ +F + L +G KI++PPSALD L L+IEYPM+F++ N T A
Sbjct: 17 FDLQLRCFSAAFYEGADTKKINELNHGGKILLPPSALDLLVRLNIEYPMMFKVQNLTDAK 76
Query: 63 RVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDI 122
T+CGV+EF+A+EG YLP WMM + L EG+ V + A+L K +Y KL+P + DFL I
Sbjct: 77 CFTHCGVLEFLAEEGRCYLPSWMMRQLHLNEGECVRITYATLPKATYTKLKPQSTDFLAI 136
Query: 123 SNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPL 182
SNP+AVLE LR ++CLT GD I V YN++ V+E KP AVSIIE D V+F P
Sbjct: 137 SNPRAVLEVELRKFACLTKGDIIAVEYNDQILEFLVMEVKPERAVSIIECDMNVEFDAPE 196
Query: 183 DFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFS 242
+ EP ++SS +++ + TP +E K + F
Sbjct: 197 GYVEPNTNAASS----------------------SNAAPSMSSTP--AADEIGKGGSGFK 232
Query: 243 PFTGSGRCLNGKSSTQPT 260
FTG+G L+GKS + T
Sbjct: 233 AFTGAGHRLDGKSKSSTT 250
>gi|50554015|ref|XP_504416.1| YALI0E26235p [Yarrowia lipolytica]
gi|49650285|emb|CAG80017.1| YALI0E26235p [Yarrowia lipolytica CLIB122]
Length = 374
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 124/192 (64%), Gaps = 7/192 (3%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTY 66
F+ YRCYPI+ + D+ G KI +PPSAL +L+ LHI YPMLF+L + VTY
Sbjct: 20 FQDYYRCYPIAMMPGKDRESANYGGKIFLPPSALSKLSMLHISYPMLFQLKSEENDNVTY 79
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
GV+EFIA+EG +YLP W++E + + G ++E+ + L G +VK +P + DFLDIS+P+
Sbjct: 80 GGVLEFIAEEGRVYLPQWIIETLDVGPGSLLEISSCDLPLGKFVKFEPQSVDFLDISDPR 139
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST----AVSIIETDCEVDFIPPL 182
AVLE + +++S LT GD YN+K Y + V+E KP +V +ETD EVDF PP+
Sbjct: 140 AVLERSFQNFSTLTVGDVFKFSYNDKTYGMKVLEVKPDLEDKHSVCCVETDIEVDFAPPV 199
Query: 183 DFKEPEKPSSSS 194
+ +P S S+
Sbjct: 200 GYVDPSTQSDSN 211
>gi|414876356|tpg|DAA53487.1| TPA: hypothetical protein ZEAMMB73_793685, partial [Zea mays]
Length = 241
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 95/237 (40%), Positives = 138/237 (58%), Gaps = 39/237 (16%)
Query: 35 MPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEG 94
MP SALDRL L+IEYPMLF++ + S R T+CGV+EF+ADEG I++P W+M ++ + E
Sbjct: 1 MPLSALDRLGGLNIEYPMLFQIKHPSTERATHCGVLEFVADEGFIHMPSWLMAHLGVPEN 60
Query: 95 DIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKY 154
+IV V++ SL K +++KLQPHTKDFL + NPK +LE + C+T G+TI V ++Y
Sbjct: 61 EIVLVRSTSLPKATFMKLQPHTKDFLHVPNPKELLEHNFGKFPCVTAGETIAVTEGERRY 120
Query: 155 YINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGP 214
Y++V+E P+ AV I+TDC VDF PPLD+ E
Sbjct: 121 YLDVLEACPAGAVCSIDTDCAVDFAPPLDYVE---------------------------- 152
Query: 215 EKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTGSGRCLNGKSSTQPTVSPSSPLIDNP 271
P +S + PP+ P + F+G+GR ++GK PT SP++ + P
Sbjct: 153 APPFVASQGSDEPPQ-----PAR------FSGTGRRMDGKPVEMPTPSPAAESVVAP 198
>gi|426200072|gb|EKV49996.1| hypothetical protein AGABI2DRAFT_115061 [Agaricus bisporus var.
bisporus H97]
Length = 460
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 126/192 (65%), Gaps = 5/192 (2%)
Query: 9 AFERKYRCYPISFIDKPHLEN---GDKIVMPPSALDRLAYLHIEYPMLFELSN-TSAGRV 64
+F+ + Y ++ + EN G K++MPPSAL L L +E P F+L N ++
Sbjct: 36 SFDEYLKAYSVAMLPGRQRENVSYGGKVIMPPSALASLTNLEVEGPWTFQLRNPANSAAS 95
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
T+ GV+EFIA+EG+++LPYWMM+ + L EGD + + L KG +VKLQ T FL+IS+
Sbjct: 96 THAGVLEFIAEEGVVHLPYWMMKTLRLNEGDPIRITGTELVKGKFVKLQAQTVHFLEISD 155
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST-AVSIIETDCEVDFIPPLD 183
PKAVLE LR++S LT GD I + YN+ + + V+ETKP +SI++TD EVDF P+
Sbjct: 156 PKAVLEQALRNFSALTQGDIIEISYNSIVFGLLVMETKPGGEGISILDTDLEVDFAAPVG 215
Query: 184 FKEPEKPSSSSL 195
+ EPE+P +S+L
Sbjct: 216 YVEPERPKASAL 227
>gi|449017007|dbj|BAM80409.1| similar to ubiquitin fusion-degradation protein 1 [Cyanidioschyzon
merolae strain 10D]
Length = 336
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 82/182 (45%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 12 RKYRCYPISFID--KPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGV 69
R+ + ++F + +P E GDKI++P S L L + E PM+F + + RVT+ GV
Sbjct: 22 RQLESFSLAFSNAARPEYELGDKILLPQSLLAELIQWNTEDPMIFRVQAQRSERVTHVGV 81
Query: 70 MEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVL 129
+EF A+EG YLP+W+M+N+ LQEGD+V+++ ASL K YVKLQPH +F ++NP+AVL
Sbjct: 82 IEFTAEEGKCYLPHWLMQNLALQEGDVVQLETASLPKARYVKLQPHLTEFTQMTNPRAVL 141
Query: 130 ETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEK 189
ET LR Y+ LT GD I + YN K +++ V+ +P++AV + +TD V+F PP D PE
Sbjct: 142 ETRLRHYTALTEGDEIAIEYNGKMFWLTVIACEPASAVCVTDTDVSVEFAPPRDMP-PEM 200
Query: 190 PS 191
P+
Sbjct: 201 PA 202
>gi|393216917|gb|EJD02407.1| UFD1-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 492
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 128/190 (67%), Gaps = 5/190 (2%)
Query: 9 AFERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSN-TSAGRV 64
+++ + Y ++ + ++ +L G KI+MPPSAL L L +E P +F+LSN +
Sbjct: 39 SYDEYMKAYSVALLPGNERTNLSYGGKIIMPPSALANLTNLDLESPWMFKLSNPANPAAS 98
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
T+ GV+EFIA+EG ++LPYWMM+ + L EGD + + A L KG +VKLQP FL+IS+
Sbjct: 99 THAGVLEFIAEEGCVHLPYWMMKTLNLNEGDPIRITGAELPKGQFVKLQPQAVHFLEISD 158
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST-AVSIIETDCEVDFIPPLD 183
PKAVLE LR++S LT GD I + YN+ + V+E++P ++II+TD EVDF PP+
Sbjct: 159 PKAVLEHALRNFSALTQGDIIAISYNSIVFDFLVMESQPGGEGINIIDTDLEVDFAPPVG 218
Query: 184 FKEPEKPSSS 193
+KEPE+P ++
Sbjct: 219 YKEPERPKAA 228
>gi|402591462|gb|EJW85391.1| ubiquitin fusion degradation protein UFD1 containing protein,
partial [Wuchereria bancrofti]
Length = 276
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 134/229 (58%), Gaps = 24/229 (10%)
Query: 33 IVMPPSALDRLAYLHIEYPMLFELSN-TSAGRVTYCGVMEFIADEGLIYLPYWMMENMLL 91
I++PPSALD L L+IEYPM+F++ N T A T+CGV+EF+A+EG YLP WMM + L
Sbjct: 1 ILLPPSALDLLVRLNIEYPMMFKVQNLTDAKCFTHCGVLEFLAEEGRCYLPSWMMRQLHL 60
Query: 92 QEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDTIMVPYNN 151
EG+ V + A+L K +Y KL+P + DFL ISNP+AVLE LR ++CLT GD I V YN+
Sbjct: 61 NEGECVRITYATLPKATYTKLKPQSTDFLAISNPRAVLEVELRKFACLTKGDIIAVEYND 120
Query: 152 KKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEKPSSSSLSNRTLPEVKEEPPLDF 211
+ V+E +P AVSIIE D V+F P + EP ++SS SN PP+
Sbjct: 121 QILEFLVMEVEPERAVSIIECDMNVEFDAPEGYVEPNTNAASS-SNAA-------PPMS- 171
Query: 212 KGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTGSGRCLNGKSSTQPT 260
+ P E K + F FTG+G L+GKS + T
Sbjct: 172 --------------SAPAADETGIKGGSGFKAFTGAGHRLDGKSKSSTT 206
>gi|336364945|gb|EGN93298.1| hypothetical protein SERLA73DRAFT_12127 [Serpula lacrymans var.
lacrymans S7.3]
gi|336377512|gb|EGO18674.1| hypothetical protein SERLADRAFT_334153 [Serpula lacrymans var.
lacrymans S7.9]
Length = 317
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 127/190 (66%), Gaps = 5/190 (2%)
Query: 9 AFERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSN-TSAGRV 64
A++ R Y ++ + ++ +L G KI+MPPSAL L L +E P +F+L N +++ +
Sbjct: 10 AYDEYLRAYSVAMLPGRERENLSYGGKIIMPPSALANLTNLDLELPWMFQLRNPSNSAAL 69
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
T+ GV+EFIA+EG+++LPYWMM+ + L EGD + + L KG VKLQ + FLDIS+
Sbjct: 70 THAGVLEFIAEEGVVHLPYWMMKTLRLNEGDPIRITGTELPKGKLVKLQAQSTHFLDISD 129
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKP-STAVSIIETDCEVDFIPPLD 183
PKAVLE LR++S LT GD I + YN+ + + V+E P +S+++TD EVDF PP+
Sbjct: 130 PKAVLEQALRNFSALTQGDIIEISYNSIVFGLLVMEASPGGGGISVLDTDLEVDFAPPVG 189
Query: 184 FKEPEKPSSS 193
+ EPE+P ++
Sbjct: 190 YVEPERPKAA 199
>gi|367055042|ref|XP_003657899.1| hypothetical protein THITE_2124095 [Thielavia terrestris NRRL 8126]
gi|347005165|gb|AEO71563.1| hypothetical protein THITE_2124095 [Thielavia terrestris NRRL 8126]
Length = 331
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 77/175 (44%), Positives = 119/175 (68%), Gaps = 3/175 (1%)
Query: 23 DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLP 82
++P L G KI +PPSALD+++ LH+++P++ EL N + G+ T+ GV+EF+A+EG Y+P
Sbjct: 6 ERPELNYGSKIFLPPSALDKVSRLHVQWPIMLELINGATGKHTHAGVLEFVAEEGRAYIP 65
Query: 83 YWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTG 142
WMM+ + L GD+++VK SL VKLQP + +FL+I++P+AVLE R+++ LT G
Sbjct: 66 QWMMQTLQLDVGDMIQVKTTSLELAKLVKLQPQSVNFLEITDPRAVLEKAFRNFAALTKG 125
Query: 143 DTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIPPLDFKEPEKPSSSS 194
D YN++ Y + V++ KP T VS+IETD V+F PP+ + EPE+ S
Sbjct: 126 DVFNFEYNDEVYDVAVLDVKPETEKMGVSMIETDVSVEFAPPVGYVEPERVQRDS 180
>gi|367035510|ref|XP_003667037.1| hypothetical protein MYCTH_2121561 [Myceliophthora thermophila ATCC
42464]
gi|347014310|gb|AEO61792.1| hypothetical protein MYCTH_2121561 [Myceliophthora thermophila ATCC
42464]
Length = 331
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 118/170 (69%), Gaps = 3/170 (1%)
Query: 23 DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLP 82
++P L G KI +PPSALD+++ LH+++P++ EL N + G+ T+ GV+EF+A+EG Y+P
Sbjct: 6 ERPELNYGSKIFLPPSALDKVSRLHVQWPIMLELINGATGKHTHAGVLEFVAEEGRAYIP 65
Query: 83 YWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTG 142
WMM+ + L GD+++VK SL VKLQP + +FL+I++P+AVLE R+++ LT G
Sbjct: 66 QWMMQTLQLDVGDMIQVKTTSLELAKLVKLQPQSVNFLEITDPRAVLEKAFRNFAALTKG 125
Query: 143 DTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIPPLDFKEPEK 189
D YN++ Y + V++ KP + VS+IETD V+F PP+ + EPEK
Sbjct: 126 DVFNFEYNDEIYDVAVLDVKPESEKMGVSMIETDVSVEFAPPVGYVEPEK 175
>gi|116204729|ref|XP_001228175.1| hypothetical protein CHGG_10248 [Chaetomium globosum CBS 148.51]
gi|88176376|gb|EAQ83844.1| hypothetical protein CHGG_10248 [Chaetomium globosum CBS 148.51]
Length = 333
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 121/171 (70%), Gaps = 4/171 (2%)
Query: 23 DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAG-RVTYCGVMEFIADEGLIYL 81
++P L G KI +PPSALD+++ +H+++P++ EL N +AG + T+ GV+EF+A+EG Y+
Sbjct: 6 ERPDLNYGSKIFLPPSALDKVSRMHVQWPIMLELINGAAGGKHTHAGVLEFVAEEGRAYI 65
Query: 82 PYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTT 141
P WMM+++ L GD+++VK SL VKLQP + +FL+I++P+AVLE R+++ LT
Sbjct: 66 PQWMMQSLQLDVGDMIQVKTTSLELAKLVKLQPQSVNFLEITDPRAVLEKAFRNFAALTK 125
Query: 142 GDTIMVPYNNKKYYINVVETKPSTA---VSIIETDCEVDFIPPLDFKEPEK 189
GD YN++ Y + V++ KP TA VS+IETD VDF PP+ + EPE+
Sbjct: 126 GDVFNFEYNDEVYDMAVLDVKPETARMGVSMIETDVSVDFAPPVGYVEPER 176
>gi|403214668|emb|CCK69168.1| hypothetical protein KNAG_0C00540 [Kazachstania naganishii CBS
8797]
Length = 369
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/207 (42%), Positives = 130/207 (62%), Gaps = 16/207 (7%)
Query: 10 FERKYRCYPISF----IDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F+ +RCYPI I KP G KI +P SAL++L+ L+++YPMLFE+ +
Sbjct: 22 FKETFRCYPIDAMNDRIKKPGANYGGKIFLPASALNKLSVLNVKYPMLFEILARESNTRA 81
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+ GV+EF ++EG +YLP WM + + G +VEV + + +G +VKL+P + DFLDIS+P
Sbjct: 82 FGGVLEFTSEEGRVYLPKWMFRGLGITVGGLVEVLSTDVPQGRFVKLEPQSTDFLDISDP 141
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVS---IIETDCEVDFIPPL 182
KAVLET LR++S LT D I + YN+ Y I ++E KP +A+ ++ETD DF PP+
Sbjct: 142 KAVLETALRNFSTLTVEDIIEINYNDTIYGIKILEVKPKSAIQSICVVETDLVTDFAPPI 201
Query: 183 DFKEPEKPS---------SSSLSNRTL 200
+ EPE+ S +++ SNRTL
Sbjct: 202 GYVEPERFSDKIKAPVDKAAANSNRTL 228
>gi|358060029|dbj|GAA94088.1| hypothetical protein E5Q_00735 [Mixia osmundae IAM 14324]
Length = 515
Score = 174 bits (440), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 112/321 (34%), Positives = 163/321 (50%), Gaps = 43/321 (13%)
Query: 8 AAFERKYRCYPISFID---------------KPHLENGDKIVMPPSALDRLAYLHIEYPM 52
AAF + YR Y + + + +L G KI+MPP AL L L +E P
Sbjct: 122 AAFRQNYRAYSTAVFEIREGRADGTGVHGQGRANLMYGGKILMPPEALQMLTDLDLESPW 181
Query: 53 LFELSNTSAGRV-TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVK 111
FE+ N + T+ GV+EFIA G ++LP WMM + L EGD V + A L KG ++K
Sbjct: 182 NFEIINARHQDLSTHGGVLEFIAGPGTVHLPGWMMTKLQLNEGDQVRINGAKLPKGKFIK 241
Query: 112 LQPHTKDFLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIE 171
+Q + FL++S+ KAVLE LR+Y+ LT GD I + YN + I ++ETKP A+S+ E
Sbjct: 242 VQAQSVLFLELSDHKAVLEQALRNYATLTAGDIIEIGYNGMTFEILIMETKPEGAISVFE 301
Query: 172 TDCEVDFIPPLDFKEPEK---PSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPP 228
TD EVDF P + EPE+ P + +++++ ++ +D KG SSS +
Sbjct: 302 TDIEVDFAAPKGYVEPERKPAPPAPTMASKLGIDISATQDVDAKGQATNGSSSAAQ---- 357
Query: 229 EVKEEPPKKIAKFSPFTGSGRCLNGK------SSTQPT--VSPSSPLI--DNPQQNAANG 278
A F+ F GSG L GK +ST+ V P+S ++ D P+ A+
Sbjct: 358 ----------AAFNSFVGSGNTLAGKRVKGKGTSTKKVQEVDPTSRIVRTDQPRIVTADT 407
Query: 279 INGSKSSSASSRQKSGKLVFG 299
G + A G L FG
Sbjct: 408 QIGGRRVPARLDLPYGTLFFG 428
>gi|406695719|gb|EKC99021.1| ubiquitin fusion-degradation 1-like protein [Trichosporon asahii
var. asahii CBS 8904]
Length = 459
Score = 173 bits (439), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 119/348 (34%), Positives = 183/348 (52%), Gaps = 35/348 (10%)
Query: 8 AAFERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSN--TSA 61
++++ ++ Y ++ + ++P L G KI+MPPSAL +L L I+ P F L N
Sbjct: 39 SSYDDYFKAYSVATMQHGHERPELMYGGKIIMPPSALIKLTSLDIDSPWTFHLRNPRNPT 98
Query: 62 GRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLD 121
TY GV+EFIA+EG+++LP WMM+ + L EGD V + A L KG VK+Q + DFL+
Sbjct: 99 ENQTYAGVLEFIAEEGIVHLPAWMMKKLNLNEGDPVRLTGAVLPKGKMVKIQAQSVDFLE 158
Query: 122 ISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKP-STAVSIIETDCEVDFIP 180
+++ KAVLE+ LR YS LT GD I + YN+ + ++ET P T +SII+TD EVDF P
Sbjct: 159 VADAKAVLESALRYYSALTKGDIIEITYNSLVFEFLIMETTPEGTGISIIDTDLEVDFAP 218
Query: 181 PLDFKEPEKPSSS---SLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKK 237
P+ + EPE+ + + +++++ +V E +D P +P SS+S RT + + P
Sbjct: 219 PVGYVEPERKAPAPIPTMADKLKIDVGETTSVD---PSRP-VSSMSIRT--QGSGDGP-- 270
Query: 238 IAKFSPFTGSGRCLNGK----SSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKS 293
FTG G+ L+GK + P+ ++ +N + A+
Sbjct: 271 ---LESFTGVGQSLSGKRIRGKGLAKKIEEDHLTFSGPRIITSDSLNDDRKVPAALVLPE 327
Query: 294 GKLVFGSNANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLR 341
GK FG KV K + PP Q+F G+ SLR
Sbjct: 328 GKFFFGYKYVPFDKS--KVKKKEEAPAPP--------QSFQGQGNSLR 365
>gi|330038906|ref|XP_003239736.1| ubiquitin fusion degradation protein [Cryptomonas paramecium]
gi|327206661|gb|AEA38838.1| ubiquitin fusion degradation protein [Cryptomonas paramecium]
Length = 193
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 71/172 (41%), Positives = 122/172 (70%)
Query: 10 FERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGV 69
F + +CY I+ I K + +K+++P S L+ + ++++P++F++ N + T+CG+
Sbjct: 13 FCFQLKCYSINLIKKFNKTKENKMILPISVLEEVNKFNLKWPLIFKIKNNLYQKETHCGI 72
Query: 70 MEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVL 129
+EF +DEG Y+P+W+++N+ EG+ + ++ L KG+YVK+QP TKDF+ +SNP+AVL
Sbjct: 73 LEFTSDEGCAYIPHWILKNLFSTEGETLFFEHIELEKGNYVKIQPQTKDFIKVSNPRAVL 132
Query: 130 ETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPP 181
ET+LR++ CLT D I + YNN+ Y++N+++ KP A+SI++TD VDFI P
Sbjct: 133 ETSLRTFVCLTKKDLICINYNNRIYWLNILDVKPGNAISILDTDINVDFILP 184
>gi|156063974|ref|XP_001597909.1| hypothetical protein SS1G_02105 [Sclerotinia sclerotiorum 1980]
gi|154697439|gb|EDN97177.1| hypothetical protein SS1G_02105 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 338
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/174 (49%), Positives = 114/174 (65%), Gaps = 7/174 (4%)
Query: 35 MPPSALDRLAYLHIEYPMLFELSNTS---AGRVTYCGVMEFIADEGLIYLPYWMMENMLL 91
MPPSAL++L LHI YPMLFEL N+ ++T+ GV+EFIADEG +YLP+WMM+ + L
Sbjct: 1 MPPSALEKLTRLHITYPMLFELINSQHPDGPKLTHAGVLEFIADEGKVYLPHWMMQTLGL 60
Query: 92 QEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDTIMVPYNN 151
+ GD+ ++K+ L S +KLQP + +FLDISNPKAVLE R +S LT GD YN+
Sbjct: 61 ETGDLFQIKSTDLPPASLIKLQPQSVNFLDISNPKAVLEKAFRDFSTLTKGDIFSFYYND 120
Query: 152 KKYYINVVETKPST---AVSIIETDCEVDFIPPLDFKEPEKPSSSSLSNRTLPE 202
Y + V+E KP T VS++ETD VDF PL + EP P +S S + P
Sbjct: 121 TVYDVAVLEVKPVTDKMGVSMLETDVSVDFAAPLGYVEPT-PMRASGSGTSTPR 173
>gi|393227853|gb|EJD35515.1| UFD1-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 462
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/188 (43%), Positives = 125/188 (66%), Gaps = 5/188 (2%)
Query: 9 AFERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSN-TSAGRV 64
A++ ++ Y ++ + ++ ++ G KI++PPSAL RL L IE P LF L N +
Sbjct: 39 AYDEYFKAYSMAMLSSRERANVSYGGKIILPPSALARLTQLEIESPWLFSLKNPANPAAS 98
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
T+ GV+EFIA+EG+ +LPYWMM+ + L+EGD + + A+L KG VKLQP T DFL++++
Sbjct: 99 THAGVLEFIAEEGVAHLPYWMMKTLRLKEGDPIRITGATLPKGKRVKLQPQTVDFLELAD 158
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVET-KPSTAVSIIETDCEVDFIPPLD 183
PKAVLE LR++S LT GD + + +N + I ++E P ++I++TD EVDF P
Sbjct: 159 PKAVLEQALRNFSTLTQGDIVEINHNTITFPILIMEILPPGPGIAIVDTDLEVDFAAPKG 218
Query: 184 FKEPEKPS 191
+ EPE+P+
Sbjct: 219 YVEPERPA 226
>gi|409082241|gb|EKM82599.1| hypothetical protein AGABI1DRAFT_97566 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 456
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 124/197 (62%), Gaps = 10/197 (5%)
Query: 9 AFERKYRCYPISFIDKPHLENGDK--------IVMPPSALDRLAYLHIEYPMLFELSN-T 59
+F+ + Y ++ + EN ++MPPSAL L L +E P F+L N
Sbjct: 28 SFDEYLKAYSVAMLPGRQRENVSYDCLLILALVIMPPSALASLTNLEVEGPWTFQLRNPA 87
Query: 60 SAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDF 119
++ T+ GV+EFIA+EG+++LPYWMM+ + L EGD + + L KG +VKLQ T F
Sbjct: 88 NSAASTHAGVLEFIAEEGVVHLPYWMMKTLRLNEGDPIRITGTELVKGKFVKLQAQTVHF 147
Query: 120 LDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST-AVSIIETDCEVDF 178
L+IS+PKAVLE LR++S LT GD I + YN+ + + V+ETKP +SI++TD EVDF
Sbjct: 148 LEISDPKAVLEQALRNFSALTQGDIIEISYNSIVFGLLVMETKPGGEGISILDTDLEVDF 207
Query: 179 IPPLDFKEPEKPSSSSL 195
P+ + EPE+P +S+L
Sbjct: 208 AAPVGYVEPERPKASAL 224
>gi|268537012|ref|XP_002633642.1| C. briggsae CBR-UFD-1 protein [Caenorhabditis briggsae]
Length = 341
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 155/296 (52%), Gaps = 44/296 (14%)
Query: 4 NHHDAAFERKYRCYPISFI------DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELS 57
H ++++ + Y F+ + G KI++P SALD L ++I+YPMLF+L+
Sbjct: 15 GHMRGSYDQTFVVYGAVFLPNATQTKIAEINYGGKILLPTSALDLLLRMNIQYPMLFKLT 74
Query: 58 NTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTK 117
N +A R+T+CGV+EF A EG LP+WMM+ + L +GD + V++A++ K ++ KL+P +
Sbjct: 75 NMAAQRITHCGVLEFSAPEGQAILPHWMMQQLGLSDGDTIRVESATVPKATFAKLKPMSL 134
Query: 118 DFLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVD 177
+FL+I+NPKA LE LR Y+CLT GD I Y + ++V+ KP+ +V IIE D +D
Sbjct: 135 EFLNITNPKAFLEVELRKYACLTKGDRIPTSYAGQTLEFSIVDVKPANSVCIIECDVNLD 194
Query: 178 FIPPLDFKEPEKPSSSSLSNRTLPEVKEEPP----LDFKGPEKPSSSSLSNRTPPEVKEE 233
F P + E + + P V +PP F G KP + + T
Sbjct: 195 FDAPEGYVEEPR--------QVAPAVNVKPPPPPASAFVGVGKPLGGAATTAT------- 239
Query: 234 PPKKIAKFSPFTGSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASS 289
S F G+GR L+GK +VS S G G+ +S A++
Sbjct: 240 --------SVFGGAGRRLDGKKKPTSSVSLCS-----------EGTTGASTSDAAA 276
>gi|343429376|emb|CBQ72949.1| related to UFD1-ubiquitin fusion degradation protein [Sporisorium
reilianum SRZ2]
Length = 431
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 119/184 (64%), Gaps = 6/184 (3%)
Query: 9 AFERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSA--GR 63
A++ ++ Y ++ + ++ ++ G KI+MPPSAL L L IE P FEL +T A R
Sbjct: 29 AYDEYFKAYSMAMLPGKERLNVSYGGKIIMPPSALAHLTNLEIESPWFFELRSTGASEAR 88
Query: 64 VTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDIS 123
T+ GV+EFIADEG ++LP WMM + L EGD + + A+L KG VK+QP T DFL+IS
Sbjct: 89 RTHAGVLEFIADEGNVHLPAWMMRTLGLSEGDPIRLTGATLPKGRMVKIQPQTVDFLEIS 148
Query: 124 NPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST-AVSIIETDCEVDFIPPL 182
+PKAVLE R++S LT GD + + YN + I ++E P+ +SIIETD EVDF PP
Sbjct: 149 DPKAVLEQAFRNFSALTPGDIVEISYNCLTFEILIMEITPNADGISIIETDLEVDFAPPK 208
Query: 183 DFKE 186
+ E
Sbjct: 209 GYVE 212
>gi|443894545|dbj|GAC71893.1| ubiquitin fusion-degradation protein [Pseudozyma antarctica T-34]
Length = 427
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 119/184 (64%), Gaps = 6/184 (3%)
Query: 9 AFERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRV- 64
A++ ++ Y ++ + ++ ++ G KI+MPPSAL L L IE P FEL +T A V
Sbjct: 32 AYDEYFKAYSMAMLPGKERLNVSYGGKIIMPPSALAHLTNLEIESPWFFELRSTGASEVR 91
Query: 65 -TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDIS 123
T+ GV+EFIADEG ++LP WMM + L EGD + + A+L KG VK+QP T DFL+IS
Sbjct: 92 RTHAGVLEFIADEGNVHLPAWMMRTLGLSEGDPIRLTGATLPKGKMVKIQPQTVDFLEIS 151
Query: 124 NPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST-AVSIIETDCEVDFIPPL 182
+PKAVLE R++S LT GD + + YN + I ++E P+ +SIIETD EVDF PP
Sbjct: 152 DPKAVLEQAFRNFSALTPGDIVEISYNCLTFEILIMEITPNADGISIIETDLEVDFAPPK 211
Query: 183 DFKE 186
+ E
Sbjct: 212 GYVE 215
>gi|392595761|gb|EIW85084.1| UFD1-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 462
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/262 (35%), Positives = 148/262 (56%), Gaps = 13/262 (4%)
Query: 9 AFERKYRCYPISFIDKPHLEN---GDKIVMPPSALDRLAYLHIEYPMLFELSNTSA-GRV 64
+++ + Y ++ + EN G KI+MPPSAL L L +E P +F+L N S
Sbjct: 40 SYDEYLKAYSVAMLPGRERENVSYGGKIIMPPSALANLTNLDLESPWMFQLRNPSNPAAS 99
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
T+ GV+EFIA+EG+++LPYWMM+ + L EGD V + L KG ++KLQ F+++S+
Sbjct: 100 THAGVLEFIAEEGVVHLPYWMMKTLRLNEGDPVRITGTELQKGKFIKLQAQEPQFVEVSD 159
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKP-STAVSIIETDCEVDFIPPLD 183
PKAVLE LR++S LT GD + + YN+ + + V+ET P +S+++TD EVDF P
Sbjct: 160 PKAVLEQALRNFSALTQGDIVEISYNSMVFGLLVMETNPGGGGISVLDTDLEVDFATPKG 219
Query: 184 FKEPEKPSS---SSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAK 240
+ EPE+P + S+++++ ++ P G +PSSS T + K
Sbjct: 220 YVEPERPKAAPPSTMASKLNIDLNSSTP----GSSRPSSSLGGGFTAGKTTAV-SKGGDH 274
Query: 241 FSPFTGSGRCLNGKSSTQPTVS 262
+ F G G L G+ + +S
Sbjct: 275 WESFKGKGETLTGRKTKGKGIS 296
>gi|403413781|emb|CCM00481.1| predicted protein [Fibroporia radiculosa]
Length = 459
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/262 (36%), Positives = 151/262 (57%), Gaps = 12/262 (4%)
Query: 9 AFERKYRCYPISFI--DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSN-TSAGRVT 65
A++ ++ Y ++ + + +L +I+MPPSAL L + +E P +F+L N T++ T
Sbjct: 33 AYQDYFKAYSVAMLPRTRDNLNYVGQIIMPPSALANLTTMELESPWMFKLQNVTNSAAST 92
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
Y GV+EFIA+EG ++LP WMM+ + L EGD + + A L KG VKLQ + FL+IS+P
Sbjct: 93 YAGVLEFIAEEGCVHLPQWMMKTLRLDEGDPIRITGAELPKGKMVKLQAQSTVFLEISDP 152
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST-AVSIIETDCEVDFIPPLDF 184
KAVLE LR +S LT GD I + YN+ + + V+ET P +S++ TD EVDF PP+ +
Sbjct: 153 KAVLEQALRHFSALTQGDIIEISYNSIVFGLLVMETHPGGEGISVLNTDLEVDFAPPVGY 212
Query: 185 KEPEKPSSS---SLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIA-K 240
EPE+P ++ +++++ ++ + P G +PSSS + K
Sbjct: 213 VEPERPKAAPPPTMASKLNIDLNSQTP----GSSRPSSSLGETFAGSGTRGAAVSKGGDH 268
Query: 241 FSPFTGSGRCLNGKSSTQPTVS 262
+ F G G L+G+ + VS
Sbjct: 269 WESFKGKGETLSGRKTKGKGVS 290
>gi|388581875|gb|EIM22182.1| UFD1-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 449
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/257 (39%), Positives = 148/257 (57%), Gaps = 27/257 (10%)
Query: 8 AAFERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNT-SAGR 63
+AF + YR Y ++ + ++P+L+ G KI+MPPSAL RL L IE P FE+S+ + +
Sbjct: 77 SAFTQHYRAYSVAMMGGNERPNLQYGGKIIMPPSALARLTDLEIESPWTFEVSSARNPTK 136
Query: 64 VTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDIS 123
T+ GV+EFIADEG ++LP WMM+ + L+EG +++ A L KG + KLQ T DFL+IS
Sbjct: 137 KTHAGVLEFIADEGNVHLPAWMMKQLELEEGSPLKISGAVLPKGKFTKLQAQTTDFLEIS 196
Query: 124 NPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKP---STAVSIIETDCEVDFIP 180
+ K VLE LR++S LT GD I + +N + + V+E +P + ++ II+TD EVDF P
Sbjct: 197 DHKTVLERALRNFSTLTKGDYIEILHNCITFELLVMEIEPEPDNQSIFIIDTDLEVDFAP 256
Query: 181 PLDFKEPE-KPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIA 239
P + EP KP P + + +D + E SS T PEV
Sbjct: 257 PKGYVEPAPKPREPQ------PTMASKMKIDTRAQEDSPMSSRPTSTVPEV--------- 301
Query: 240 KFSPFTGSGRCLNGKSS 256
F GSG+ L G+ +
Sbjct: 302 ----FKGSGQTLGGRKT 314
>gi|156321338|ref|XP_001618253.1| hypothetical protein NEMVEDRAFT_v1g77672 [Nematostella vectensis]
gi|156198205|gb|EDO26153.1| predicted protein [Nematostella vectensis]
Length = 120
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 74/120 (61%), Positives = 97/120 (80%)
Query: 33 IVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQ 92
++MPPSALD+L+ L+I YPMLF+L+N R T+CGV+EF+ADEG IYLP+WMM NMLL
Sbjct: 1 VIMPPSALDQLSMLNIVYPMLFKLTNNRIDRSTHCGVLEFVADEGKIYLPHWMMRNMLLD 60
Query: 93 EGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNK 152
EG +++V++ASL S+ K QP + DFLDI+NPKAVLE LRS++CLTTGD I + YN+K
Sbjct: 61 EGGLLQVESASLPVASFAKFQPQSVDFLDITNPKAVLENALRSFACLTTGDIIAIKYNDK 120
>gi|353241350|emb|CCA73171.1| related to UFD1-ubiquitin fusion degradation protein
[Piriformospora indica DSM 11827]
Length = 525
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 98/272 (36%), Positives = 144/272 (52%), Gaps = 35/272 (12%)
Query: 9 AFERKYRCYPISFIDKPHLEN---GDKIVMPPSALDRLAYLHIEYPMLFELSN-TSAGRV 64
AF+ Y+ Y ++ + EN G KI+MPPSAL RL+ L+ P +F+L N +A
Sbjct: 85 AFDEHYKAYSVAMFPRAERENVSYGGKILMPPSALARLSQLNFPSPWMFQLRNPKNAAAS 144
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
T+ GV+EFIADEG ++LP+WMM+ + L E D + + ASL KG +VKLQ F+++S+
Sbjct: 145 THAGVLEFIADEGCVFLPHWMMKTLKLNEADPIRITGASLPKGKFVKLQAQETSFVEVSD 204
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETK----------------PSTAVS 168
PKAVLE LR+++CLT GD I + YN+ + + V+ET+ P ++
Sbjct: 205 PKAVLEQALRNFTCLTQGDIIEISYNSIIFGLLVMETRTTSQSGPASSRSATPAPVPGIA 264
Query: 169 IIETDCEVDFIPPLDFKE----PEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSN 224
+ +TD EVDF P +KE P KP + + L K G PS S +
Sbjct: 265 VFDTDLEVDFATPKGWKEPVRAPPKPIETMATRLGLDGGKTA-----SGKSTPSGSRPGS 319
Query: 225 RTPPEVKEEPPKKIAKFSPFTGSGRCLNGKSS 256
V ++ F F G G LNG+ +
Sbjct: 320 SLGAVVDDD------AFEAFKGRGETLNGRKT 345
>gi|71014501|ref|XP_758719.1| hypothetical protein UM02572.1 [Ustilago maydis 521]
gi|46098509|gb|EAK83742.1| hypothetical protein UM02572.1 [Ustilago maydis 521]
Length = 426
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 117/184 (63%), Gaps = 6/184 (3%)
Query: 9 AFERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRV- 64
A++ ++ Y ++ + ++ ++ G KI+MPPSAL L L IE P FEL T A V
Sbjct: 29 AYDEYFKAYSMAMLPGKERLNVSYGGKIIMPPSALAHLTNLEIESPWFFELRTTGASEVR 88
Query: 65 -TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDIS 123
T+ GV+EFIADEG ++LP WMM + L EGD + + A+L KG VK+QP T DFL+IS
Sbjct: 89 RTHAGVLEFIADEGHVHLPAWMMRTLGLSEGDPIRLTGATLPKGKMVKIQPQTVDFLEIS 148
Query: 124 NPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKP-STAVSIIETDCEVDFIPPL 182
+PKAVLE R++S LT GD + + YN + I ++E P + +SIIETD EVDF P
Sbjct: 149 DPKAVLEQAFRNFSALTPGDIVEISYNCLTFEILIMEITPDADGISIIETDLEVDFAAPK 208
Query: 183 DFKE 186
+ E
Sbjct: 209 GYVE 212
>gi|395333691|gb|EJF66068.1| UFD1-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 464
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 93/266 (34%), Positives = 153/266 (57%), Gaps = 21/266 (7%)
Query: 9 AFERKYRCYPISFID---KPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSN-TSAGRV 64
A++ ++ Y ++ + + ++ G KI+MPPS L L + +E P +F+L N +
Sbjct: 40 AYDEYFKAYSVAMLPGRPRDNVSYGGKIIMPPSVLANLTNMELESPWMFKLRNPGNPAAS 99
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
T+ GV+EFIA+EG ++LP WMM+ + L+EGD + + L KG VKLQ + DFL+IS+
Sbjct: 100 THAGVLEFIAEEGCVHLPRWMMKTLRLEEGDPIRITGCELPKGKLVKLQAQSVDFLEISD 159
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST-AVSIIETDCEVDFIPPLD 183
PKAVLE LR++S LT GD I + YN+ + + V+ET+P +S+++TD EVDF P+
Sbjct: 160 PKAVLEQALRNFSALTQGDIIEISYNSIVFGLLVMETQPGGEGISVLDTDLEVDFAAPVG 219
Query: 184 FKEPEKPSSSSLSNRTLPEVKEEPPLDFK----GPEKPSSS---SLSNRTPPEVKEEPPK 236
+ EPE+P ++ P ++++ +D G +PSSS + + P + K
Sbjct: 220 YVEPERPKAA-----PQPTMRDKLNIDLSSSTPGSSRPSSSMGFAGAAAKGPAIS----K 270
Query: 237 KIAKFSPFTGSGRCLNGKSSTQPTVS 262
++ F G G L G+ + +S
Sbjct: 271 GGDQWESFKGKGETLQGRKTKGKGIS 296
>gi|388853609|emb|CCF52781.1| related to UFD1-ubiquitin fusion degradation protein [Ustilago
hordei]
Length = 428
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/266 (37%), Positives = 144/266 (54%), Gaps = 33/266 (12%)
Query: 9 AFERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFEL--SNTSAGR 63
A++ ++ Y ++ + ++ ++ G KI+MPPSAL L L IE P FEL + S R
Sbjct: 32 AYDEYFKAYSMAMLPSKERLNVSYGGKIIMPPSALAHLTNLEIESPWFFELRSAGVSEVR 91
Query: 64 VTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDIS 123
T+ GV+EFIADEG ++LP WMM + L EGD + + +L KG VK+QP T DFL+IS
Sbjct: 92 RTHAGVLEFIADEGNVHLPAWMMRTLGLSEGDPIRLTGTTLPKGKMVKIQPQTVDFLEIS 151
Query: 124 NPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST-AVSIIETDCEVDFIPPL 182
+PKAVLE R++S LT GD + + YN + I ++E P+ +SIIETD EVDF PP
Sbjct: 152 DPKAVLEQAFRNFSSLTPGDIVEISYNCLTFEILIMEITPNADGISIIETDLEVDFAPPK 211
Query: 183 DFKEPEK---------PSSSSLSNR---TLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEV 230
+ EP S ++ N ++P + P G S ++ TP
Sbjct: 212 GYVEPTPQPRPPPPTMASKLNIDNSRVDSIPPTRTSTPGSLAGTSAAGGSGVA--TPS-- 267
Query: 231 KEEPPKKIAKFSPFTGSGRCLNGKSS 256
PF GSG+ L+G+ S
Sbjct: 268 -----------GPFRGSGQTLSGRKS 282
>gi|392578193|gb|EIW71321.1| hypothetical protein TREMEDRAFT_67697 [Tremella mesenterica DSM
1558]
Length = 436
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 85/183 (46%), Positives = 117/183 (63%), Gaps = 8/183 (4%)
Query: 9 AFERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
AF+ YR Y ++ + D+ L G KI+MP SAL +L+ L I P F+L N
Sbjct: 23 AFDEYYRAYSVAVMSQRDRIELLYGGKIIMPASALAKLSSLDIPGPWTFQLRNPRH---- 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
GV+EFIADEG ++LP WMM+ + L+EGD + + ASL KG VKLQ + DFL +S+P
Sbjct: 79 MPGVLEFIADEGNVHLPAWMMKTLQLEEGDPIRLTGASLPKGKLVKLQAQSTDFLQVSDP 138
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKP-STAVSIIETDCEVDFIPPLDF 184
+AVLE+ LR YS LT GD I + YN+ + V+ET+P + +S+I+TD EVDF PL +
Sbjct: 139 RAVLESALRFYSTLTKGDIIEITYNSLIFEFAVLETQPEGSGISVIDTDLEVDFATPLGY 198
Query: 185 KEP 187
EP
Sbjct: 199 VEP 201
>gi|302692236|ref|XP_003035797.1| hypothetical protein SCHCODRAFT_74188 [Schizophyllum commune H4-8]
gi|300109493|gb|EFJ00895.1| hypothetical protein SCHCODRAFT_74188 [Schizophyllum commune H4-8]
Length = 447
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 77/182 (42%), Positives = 118/182 (64%), Gaps = 5/182 (2%)
Query: 10 FERKYRCYPISFID---KPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSN-TSAGRVT 65
F+ + Y ++ + + ++ G KI+MPPSAL RL L ++ P +F+L N + T
Sbjct: 12 FDEYLKAYSVAMLPGRPRDNVSYGGKIIMPPSALARLTRLDLQDPWMFQLRNPANPAAST 71
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+ GV+EFIA+EG+++LPYWMM+ + L EGD + + L KG +VKLQ T FL+IS+P
Sbjct: 72 HAGVLEFIAEEGVVHLPYWMMKTLRLNEGDPIRITGTELPKGKFVKLQAQTVHFLEISDP 131
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST-AVSIIETDCEVDFIPPLDF 184
KAVLE LR+++ LT GD I + YN+ + + V+E P +S+++TD EVDF PP+ +
Sbjct: 132 KAVLEQALRNFTALTQGDIIEISYNSIVFGLLVMEAVPGGEGISVLDTDLEVDFAPPVGY 191
Query: 185 KE 186
E
Sbjct: 192 VE 193
>gi|308477183|ref|XP_003100806.1| CRE-UFD-1 protein [Caenorhabditis remanei]
gi|308264618|gb|EFP08571.1| CRE-UFD-1 protein [Caenorhabditis remanei]
Length = 351
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 102/291 (35%), Positives = 151/291 (51%), Gaps = 34/291 (11%)
Query: 5 HHDAAFERKYRCYPISFIDKP------HLENGDKIVMPPSALDRLAYLHIEYPMLFELSN 58
H +++ + Y F+ + G KI++P SALD L L+IEYPMLF+L+N
Sbjct: 24 HMRGNYDQTFVVYGAVFLPNATQTKITEINYGGKILLPTSALDLLLRLNIEYPMLFKLTN 83
Query: 59 TSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKD 118
A RVT+CGV+EF A EG LP WMM+ + L +GD V V++A++ K ++ KL+P + +
Sbjct: 84 MPAQRVTHCGVLEFSAPEGQAILPQWMMQQLGLTDGDTVRVESATVPKATFAKLKPMSLE 143
Query: 119 FLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDF 178
FL+I+NP+A LE LR Y+CLT D I Y + VV+ KP+ +V IIE D +DF
Sbjct: 144 FLNITNPRAFLEVELRKYACLTKNDLIPTSYAGQTLEFLVVDVKPANSVCIIECDVNLDF 203
Query: 179 IPPLDFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKI 238
P + E+P S + P ++ K P P+S+ L +
Sbjct: 204 DAPEGYV--EQPRSVA------------PSVNVKPPAPPASAFLG---AGQATAGTGSTA 246
Query: 239 AKFSPFTGSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASS 289
S F G+GR L+GK +VS S G G+ +S A++
Sbjct: 247 TTTSVFGGAGRRLDGKKKPTSSVSLCS-----------EGTTGASTSDAAA 286
>gi|339241073|ref|XP_003376462.1| ubiquitin fusion degradation protein 1-like protein [Trichinella
spiralis]
gi|316974820|gb|EFV58293.1| ubiquitin fusion degradation protein 1-like protein [Trichinella
spiralis]
Length = 571
Score = 163 bits (413), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 131/212 (61%), Gaps = 20/212 (9%)
Query: 10 FERKYRCYPISF------IDKP-HLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTS-- 60
+ +YRC+ ++ I++ +++ G K+++P SALD L LHI YPMLF+++N++
Sbjct: 211 YNTRYRCFSVAMCPSSVSIERTRNIDYGGKVLLPHSALDWLTRLHISYPMLFKITNSNKD 270
Query: 61 AGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFL 120
R T+CGV+EF +EG Y+P+WMM N+LL EGD++++++ L G+YVKL+P F+
Sbjct: 271 VKRSTHCGVLEFHQEEGKCYIPHWMMRNLLLCEGDMIQIESVDLPVGTYVKLKPQDSRFV 330
Query: 121 DISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEV---- 176
++NP +LE LR+Y+CLT GD I + YN+K V E +P+ AVSIIE D V
Sbjct: 331 GLANPSVLLELKLRNYACLTKGDMIAIEYNDKVMEFLVQELRPTDAVSIIECDINVRRSA 390
Query: 177 -------DFIPPLDFKEPEKPSSSSLSNRTLP 201
+++ D E + S+S+ + LP
Sbjct: 391 KSVCFTDEYLVDFDVPEDQPKSTSTSAALCLP 422
>gi|308453907|ref|XP_003089633.1| hypothetical protein CRE_24314 [Caenorhabditis remanei]
gi|308269637|gb|EFP13590.1| hypothetical protein CRE_24314 [Caenorhabditis remanei]
Length = 341
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/291 (34%), Positives = 151/291 (51%), Gaps = 34/291 (11%)
Query: 5 HHDAAFERKYRCYPISFIDKP------HLENGDKIVMPPSALDRLAYLHIEYPMLFELSN 58
H +++ + Y F+ + G KI++P SALD L L+IEYPMLF+L+N
Sbjct: 14 HMRGNYDQTFVVYGAVFLPNATQTKITEINYGGKILLPTSALDLLLRLNIEYPMLFKLTN 73
Query: 59 TSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKD 118
A R+T+CGV+EF A EG LP WMM+ + L +GD V V++A++ K ++ KL+P + +
Sbjct: 74 MPAQRITHCGVLEFSAPEGQAILPQWMMQQLGLTDGDTVRVESATVPKATFAKLKPMSLE 133
Query: 119 FLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDF 178
FL+I+NP+A LE LR Y+CLT D I Y + VV+ KP+ +V IIE D +DF
Sbjct: 134 FLNITNPRAFLEVELRKYACLTKNDLIPTSYAGQTLEFLVVDVKPANSVCIIECDVNLDF 193
Query: 179 IPPLDFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKI 238
P + E+P S + P ++ K P P+S+ L +
Sbjct: 194 DAPEGYV--EQPRSVA------------PSVNVKPPAPPASAFLG---AGQATAGTGSTT 236
Query: 239 AKFSPFTGSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASS 289
S F G+GR L+GK +VS S G G+ +S A++
Sbjct: 237 TTTSVFGGAGRRLDGKKKPTSSVSLCS-----------EGTTGASTSDAAA 276
>gi|401885854|gb|EJT49939.1| ubiquitin fusion-degradation 1-like protein [Trichosporon asahii
var. asahii CBS 2479]
Length = 390
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 113/317 (35%), Positives = 165/317 (52%), Gaps = 31/317 (9%)
Query: 35 MPPSALDRLAYLHIEYPMLFELSN--TSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQ 92
MPPSAL +L L I+ P F L N TY GV+EFIA+EG+++LP WMM+ + L
Sbjct: 1 MPPSALIKLTSLDIDSPWTFHLRNPRNPTENQTYAGVLEFIAEEGIVHLPAWMMKKLNLN 60
Query: 93 EGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNK 152
EGD V + A L KG VK+Q + DFL++++ KAVLE+ LR YS LT GD I + YN+
Sbjct: 61 EGDPVRLTGAVLPKGKMVKIQAQSVDFLEVADAKAVLESALRYYSALTKGDIIEITYNSL 120
Query: 153 KYYINVVETKP-STAVSIIETDCEVDFIPPLDFKEPEKPSSS---SLSNRTLPEVKEEPP 208
+ ++ET P T +SII+TD EVDF PP+ + EPE+ + + +++++ +V E
Sbjct: 121 VFEFLIMETTPEGTGISIIDTDLEVDFAPPVGYVEPERKAPAPIPTMADKLKIDVGETTS 180
Query: 209 LDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTGSGRCLNGK----SSTQPTVSPS 264
+D P +P SS+S RT + + P FTG G+ L+GK +
Sbjct: 181 VD---PSRP-VSSMSIRT--QGSGDGP-----LESFTGVGQSLSGKRIRGKGLAKKIEED 229
Query: 265 SPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNANQSSNGTPKVLPKSSSGEPPQV 324
P+ ++ +N + A+ GK FG KV K + PP
Sbjct: 230 HLTFSGPRIITSDSLNDDRKVPAALVLPEGKFFFGYKYVPFDKS--KVKKKEEAPAPP-- 285
Query: 325 EEKPKFQAFTGKKYSLR 341
Q+F G+ SLR
Sbjct: 286 ------QSFQGQGNSLR 296
>gi|351709728|gb|EHB12647.1| Ubiquitin fusion degradation protein 1-like protein [Heterocephalus
glaber]
Length = 146
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 71/137 (51%), Positives = 105/137 (76%), Gaps = 8/137 (5%)
Query: 1 AYENHHDAAFERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFEL 56
++NH F +YRC+ +S + D+ ++E G KI MPPSALD+L++L+I YPMLF+L
Sbjct: 14 VFQNH----FSTQYRCFSVSMLAGPNDRSNVEKGGKITMPPSALDQLSHLNITYPMLFKL 69
Query: 57 SNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHT 116
+N ++ R+T+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP +
Sbjct: 70 TNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGVLVQVESVNLQVATYSKFQPQS 129
Query: 117 KDFLDISNPKAVLETTL 133
DFLDI+NPKAVLE L
Sbjct: 130 PDFLDITNPKAVLENAL 146
>gi|389748667|gb|EIM89844.1| ubiquitin fusion degradation protein I [Stereum hirsutum FP-91666
SS1]
Length = 464
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 75/182 (41%), Positives = 116/182 (63%), Gaps = 5/182 (2%)
Query: 8 AAFERKYRCYPISFIDKPHLEN---GDKIVMPPSALDRLAYLHIEYPMLFELSN-TSAGR 63
+A++ + Y ++ + EN G KI+MPPSAL L L ++ P +F+L N +
Sbjct: 30 SAYDEYLKAYSVAMLPGRERENVSYGGKIIMPPSALAHLTSLDLDSPWMFKLRNPANPAA 89
Query: 64 VTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDIS 123
T+ GV+EFIA+EG+++LPYWMM+ + L EGD + + + KG +VKLQ FL+IS
Sbjct: 90 STHAGVLEFIAEEGVVHLPYWMMKTLRLNEGDPIRITGTEVPKGKFVKLQAQHVHFLEIS 149
Query: 124 NPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST-AVSIIETDCEVDFIPPL 182
+PKAVLE LR+++CLT GD I + YN+ + + V+E P +S+++TD EVDF P+
Sbjct: 150 DPKAVLEQALRNFTCLTQGDIIEISYNSIVFGLLVMEASPGGEGISVLDTDLEVDFAAPV 209
Query: 183 DF 184
+
Sbjct: 210 GY 211
>gi|299753335|ref|XP_001833205.2| ubiquitin fusion degradation protein I [Coprinopsis cinerea
okayama7#130]
gi|298410254|gb|EAU88478.2| ubiquitin fusion degradation protein I [Coprinopsis cinerea
okayama7#130]
Length = 467
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 115/184 (62%), Gaps = 5/184 (2%)
Query: 9 AFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSA-GRVTYC 67
A++ + Y ++ + EN + L RL L IE P F+L N S T+
Sbjct: 48 AYDEYLKAYSVAMMQGREREN---VSYGGKTLARLTQLDIEGPWTFQLRNPSNPAASTHA 104
Query: 68 GVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKA 127
GV+EFIA+EG+++LP+WMM+ + L EGD + + L KG +VKLQ T FL+IS+PKA
Sbjct: 105 GVLEFIAEEGVVHLPFWMMKTLRLNEGDPIRITGTELPKGKFVKLQAQTVHFLEISDPKA 164
Query: 128 VLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTA-VSIIETDCEVDFIPPLDFKE 186
VLE LR++S LT GD I + YN+ + + V+ETKP A +S+++TD EVDF P+ + E
Sbjct: 165 VLEQALRNFSALTQGDIIEISYNSIIFGLLVMETKPGGAGISVLDTDLEVDFAAPVGYVE 224
Query: 187 PEKP 190
PE+P
Sbjct: 225 PERP 228
>gi|341890696|gb|EGT46631.1| hypothetical protein CAEBREN_24565 [Caenorhabditis brenneri]
Length = 336
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 117/188 (62%), Gaps = 6/188 (3%)
Query: 5 HHDAAFERKYRCYPISFIDKP------HLENGDKIVMPPSALDRLAYLHIEYPMLFELSN 58
H +++ + Y F+ + G KI++P SALD L ++I+YPMLF+L+N
Sbjct: 14 HVSGRYDQTFVVYGAVFLPNATQTKITEINYGGKILLPTSALDLLLRMNIQYPMLFKLTN 73
Query: 59 TSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKD 118
+A +VT+CGV+EF A EG LP+WMM+ + L +GD V +++A++ K ++ KL+P + +
Sbjct: 74 MAAQKVTHCGVLEFSAPEGQAILPHWMMQQLNLCDGDTVRIESATVPKATFAKLKPMSLE 133
Query: 119 FLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDF 178
FL+ISNPKAVLE LR Y+CLT D I Y + VV+ KP+ +V IIE D +DF
Sbjct: 134 FLNISNPKAVLEVELRKYACLTKNDRIPTSYAGQTLEFLVVDVKPANSVCIIECDVNLDF 193
Query: 179 IPPLDFKE 186
P + E
Sbjct: 194 DAPEGYVE 201
>gi|384498895|gb|EIE89386.1| hypothetical protein RO3G_14097 [Rhizopus delemar RA 99-880]
Length = 283
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/344 (32%), Positives = 165/344 (47%), Gaps = 90/344 (26%)
Query: 7 DAAFERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAG 62
+ F YRCYPI+ + D+ ++ G KI++P SAL++L
Sbjct: 19 NRGFSENYRCYPIAMMQHGNDRDNVNYGGKIILPQSALEKLC------------------ 60
Query: 63 RVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDI 122
V+EFIA+EG +YLP WMME++ + G+I+EVKN +L GS+V++QP + DFLDI
Sbjct: 61 ------VLEFIAEEGRVYLPQWMMESLDTEPGNIIEVKNVTLPLGSFVRIQPQSTDFLDI 114
Query: 123 SNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKP----STAVSIIETDCEVDF 178
++ +AVLE LR++S LT D I + YN+K Y I V+ KP + +SI+ETD EVDF
Sbjct: 115 TDHRAVLEKALRNFSTLTVEDIIQINYNDKIYGIKVLGVKPFYEDHSGISIVETDLEVDF 174
Query: 179 IPPLDFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKI 238
PP+ + E + + + S + P+D P ++ KKI
Sbjct: 175 APPIGYVESSQQTQTKTS---------QMPIDL-----PKTT---------------KKI 205
Query: 239 AKFSPFTGSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVF 298
F+ F G G+ L GK N AN + G + + + L F
Sbjct: 206 --FTAFQGGGQSLRGK-------------------NKANVMEGESNPESELSDEPLNLPF 244
Query: 299 GSNANQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
G Q G P +LP S V+ + + AF G +LR
Sbjct: 245 G----QLYFGFPIILPLSVE----NVQNETEKHAFVGTGQTLRA 280
>gi|328860666|gb|EGG09771.1| hypothetical protein MELLADRAFT_74324 [Melampsora larici-populina
98AG31]
Length = 465
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/264 (33%), Positives = 140/264 (53%), Gaps = 23/264 (8%)
Query: 8 AAFERKYRCYPISFID-----------KPHLENGDKIVMPPSALDRLAYLHIEYPMLFEL 56
AF + YR + + ++ + ++ +G KI+MP AL L + +E P +FE+
Sbjct: 74 GAFSKGYRAFSTAILEIKQGRGERTGGRSNVMHGGKIIMPQDALVELTEMDMESPFMFEI 133
Query: 57 SNTSAGRV---TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQ 113
N+S + T+CGV+EFIAD G ++LP WMM+ + L EGD +++ L KG + K+Q
Sbjct: 134 RNSSPNKTNLFTHCGVLEFIADTGTVHLPQWMMKRLDLNEGDPIKLTGTRLPKGKFAKVQ 193
Query: 114 PHTKDFLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST--AVSIIE 171
+ FL++ + KAVLET+LR++SCLT GD I + +N + I ++E KP VSI E
Sbjct: 194 AQSTLFLELGDHKAVLETSLRNFSCLTKGDIIEIYHNMMTFEILIMELKPDDVPGVSIFE 253
Query: 172 TDCEVDFIPPLDFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVK 231
TD EVDF P+ + EP + + + +D G + ++ TP
Sbjct: 254 TDLEVDFAAPVGYVEPTPVPRAPPPT-----LASKLNIDASGTQSVNARGSGTNTPSGST 308
Query: 232 EEPPKKIAKFSPFTGSGRCLNGKS 255
+ + FTG GR + GKS
Sbjct: 309 VGGGQ--TAWEAFTGGGRTMGGKS 330
>gi|390597829|gb|EIN07228.1| UFD1-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 480
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 150/265 (56%), Gaps = 13/265 (4%)
Query: 9 AFERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSN-TSAGRV 64
A++ ++ Y ++ + + +L G KI+MPPSAL L L +E P +F+L N +
Sbjct: 34 AYDDYFKAYSVAMLPGKQRDNLSYGGKIIMPPSALANLTSLDLESPWMFKLRNPANPAAS 93
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
T+ GV+EFIA EG ++LPYWMM+ + L EGD + + L KG +VK QP FL++S+
Sbjct: 94 THAGVLEFIAQEGCVHLPYWMMKTLRLNEGDPIRITGVELPKGKFVKFQPQQVHFLEVSD 153
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST-AVSIIETDCEVDFIPPLD 183
PKA LE LR++S LT GD I + YN+ + + V+E +P +S+++ D EVDF P+
Sbjct: 154 PKATLEVALRNFSALTQGDVIEIVYNSIVFGMLVMEAQPGGEGISVLDVDLEVDFAAPVG 213
Query: 184 F---KEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSS---SLSNRTPPEVKEEPPKK 237
+ + P+ P S+++++ ++ E + G +P SS + + T + K K
Sbjct: 214 YVEPERPKPPPPSTMASKL--KIDLESTTNTPGSSRPGSSLSGAFAATTGEKGKVVVSKG 271
Query: 238 IAKFSPFTGSGRCLNGKSSTQPTVS 262
++ F G G L+G+ + VS
Sbjct: 272 GDEWESFKGRGETLSGRKTKGKGVS 296
>gi|403172020|ref|XP_003331180.2| hypothetical protein PGTG_13143 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169675|gb|EFP86761.2| hypothetical protein PGTG_13143 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 470
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 119/195 (61%), Gaps = 16/195 (8%)
Query: 9 AFERKYRCYPISFID-----------KPHLENGDKIVMPPSALDRLAYLHIEYPMLFELS 57
AF + Y+ Y + ++ + ++ +G KI+MP AL +L + +E P +FE+
Sbjct: 79 AFSKTYKAYSTAILEIKQGRGERTGGRSNVMHGGKIIMPQDALVQLTEMDMESPFMFEIR 138
Query: 58 NTSAGR---VTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQP 114
N+S + T+CGV+EFIAD G ++LP WMM + L EGD +++ A L KG + K+Q
Sbjct: 139 NSSPTKRDLFTHCGVLEFIADPGTVHLPQWMMTRLELNEGDSIKLTGARLPKGKFAKVQA 198
Query: 115 HTKDFLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTA--VSIIET 172
+ FL++ + KAVLET LR++SCLT GD I + +N + I ++E KP A VSI ET
Sbjct: 199 QSTLFLELGDHKAVLETALRNFSCLTKGDIIEIYHNMMTFEILIMELKPDDAPGVSIFET 258
Query: 173 DCEVDFIPPLDFKEP 187
D EVDF PL + EP
Sbjct: 259 DLEVDFAAPLGYVEP 273
>gi|17539898|ref|NP_502348.1| Protein UFD-1, isoform a [Caenorhabditis elegans]
gi|2501440|sp|Q19584.1|UFD1_CAEEL RecName: Full=Ubiquitin fusion degradation protein 1 homolog;
Short=UB fusion protein 1
gi|3876091|emb|CAA93460.1| Protein UFD-1, isoform a [Caenorhabditis elegans]
Length = 342
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 92/240 (38%), Positives = 132/240 (55%), Gaps = 26/240 (10%)
Query: 30 GDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENM 89
G KI++P SAL+ L +I PMLF+L+N + RVT+CGV+EF A EG LP WMM+ +
Sbjct: 47 GGKILLPSSALNLLMQYNIPMPMLFKLTNMAVQRVTHCGVLEFSAPEGQAILPLWMMQQL 106
Query: 90 LLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDTIMVPY 149
L +GD + +++A+L K ++ KL+P + +FL+I+NPKAVLE LR Y+CLT D I Y
Sbjct: 107 GLDDGDTIRIESATLPKATFAKLKPMSLEFLNITNPKAVLEVELRKYACLTKNDRIPTSY 166
Query: 150 NNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEKPSSSSLSNRTLPEVKEEPPL 209
+ VV+ KP+ +V IIE D +DF PP + E + + P V +PP
Sbjct: 167 AGQTLEFLVVDLKPANSVCIIECDVNLDFDPPEGYVEQPR--------QVTPAVTAKPPA 218
Query: 210 ----DFKGP-EKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTGSGRCLNGKSSTQPTVSPS 264
F G +K S + + V F G+GR L+GK +VS S
Sbjct: 219 PDASAFIGAGQKAGGSGGTGQNATSV-------------FGGAGRRLDGKKKPSSSVSLS 265
>gi|17539896|ref|NP_502349.1| Protein UFD-1, isoform b [Caenorhabditis elegans]
gi|5824461|emb|CAB54216.1| Protein UFD-1, isoform b [Caenorhabditis elegans]
Length = 336
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 92/240 (38%), Positives = 132/240 (55%), Gaps = 26/240 (10%)
Query: 30 GDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENM 89
G KI++P SAL+ L +I PMLF+L+N + RVT+CGV+EF A EG LP WMM+ +
Sbjct: 41 GGKILLPSSALNLLMQYNIPMPMLFKLTNMAVQRVTHCGVLEFSAPEGQAILPLWMMQQL 100
Query: 90 LLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDTIMVPY 149
L +GD + +++A+L K ++ KL+P + +FL+I+NPKAVLE LR Y+CLT D I Y
Sbjct: 101 GLDDGDTIRIESATLPKATFAKLKPMSLEFLNITNPKAVLEVELRKYACLTKNDRIPTSY 160
Query: 150 NNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEKPSSSSLSNRTLPEVKEEPPL 209
+ VV+ KP+ +V IIE D +DF PP + E + + P V +PP
Sbjct: 161 AGQTLEFLVVDLKPANSVCIIECDVNLDFDPPEGYVEQPR--------QVTPAVTAKPPA 212
Query: 210 ----DFKGP-EKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTGSGRCLNGKSSTQPTVSPS 264
F G +K S + + V F G+GR L+GK +VS S
Sbjct: 213 PDASAFIGAGQKAGGSGGTGQNATSV-------------FGGAGRRLDGKKKPSSSVSLS 259
>gi|162605922|ref|XP_001713476.1| ubiquitin fusion degradation protein [Guillardia theta]
gi|6690141|gb|AAF24006.1|AF083031_03 ubiquitin fusion degradation protein [Guillardia theta]
Length = 175
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 75/168 (44%), Positives = 107/168 (63%)
Query: 10 FERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGV 69
E + YP+SFI K LENGDKIV+P S L+ L P++FE+ N + +CGV
Sbjct: 4 LEFTLKTYPLSFIGKSFLENGDKIVLPQSILNYLNQNDDLNPIIFEILNLDNNKKCHCGV 63
Query: 70 MEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVL 129
EF +D+G Y+PYWM +N+ + EG + L KG ++K+QP K+F ISNPKA+L
Sbjct: 64 YEFTSDDGCAYIPYWMFKNLEINEGSPLCFIQKCLEKGYFLKIQPQQKEFFQISNPKAIL 123
Query: 130 ETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVD 177
E LR Y+ LT +TI + YNN Y++N+VE KP A++II+TD ++
Sbjct: 124 ELNLRKYTSLTKKNTISIEYNNNIYWLNIVEVKPGNAINIIDTDLNLE 171
>gi|403222122|dbj|BAM40254.1| ubiquitin fusion degradation protein [Theileria orientalis strain
Shintoku]
Length = 269
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 116/191 (60%), Gaps = 6/191 (3%)
Query: 42 RLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKN 101
+LA +I +PM+FE+ N R T GV+EFI++EG +PYW+M+N+ L EGD+V + N
Sbjct: 56 KLASRNISWPMMFEIRNPKNFRSTNGGVLEFISEEGTCNIPYWIMQNLELNEGDVVTITN 115
Query: 102 ASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVET 161
SL K +VKL+P D+ DISNP+AVLE LR+Y+ LTTGD I + Y Y I +V+
Sbjct: 116 VSLPKAKWVKLKPLNDDYWDISNPRAVLENALRNYATLTTGDVIPIHYLQTVYLIEIVDL 175
Query: 162 KPSTAVSIIETDCEVDFIPPLDFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPE-KPSSS 220
KP+ A SIIETD EVDF D + PE P S T E+ LD K P+ +
Sbjct: 176 KPARACSIIETDMEVDF----DVQMPE-PKQSVEKTVTEAEIVAGKRLDGKTPKLTKQTE 230
Query: 221 SLSNRTPPEVK 231
N+TP E K
Sbjct: 231 ETVNKTPWENK 241
>gi|71030908|ref|XP_765096.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352052|gb|EAN32813.1| hypothetical protein TP02_0530 [Theileria parva]
Length = 260
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/225 (40%), Positives = 134/225 (59%), Gaps = 13/225 (5%)
Query: 5 HHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRV 64
+ +AA YRC+ +SF + +E G+KI++P SAL LA +I +PM+FE+ N +
Sbjct: 17 YQNAAHTSNYRCFSVSFAGRESMEQGNKILLPQSALHELASRNISWPMMFEILNPKNYKR 76
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
T GV+EFI++EG +PYW L+ ++V + N SL K ++VKL+P +D+ DISN
Sbjct: 77 TNGGVLEFISEEGTCNIPYW--ARFLI---NVVTITNVSLPKATWVKLKPLNEDYWDISN 131
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDF 184
P+AVLE LR+Y+ LT GD I + Y Y ++++ KP+ A SIIETD EV+F P+
Sbjct: 132 PRAVLENALRNYATLTVGDVIPIHYIQTIYLFHIMDLKPAKACSIIETDMEVEFDMPV-- 189
Query: 185 KEPEKPSSSSLSNRTLPEVKEEPPLDFKGPE--KPSSSSLSNRTP 227
PE P T PE LD K P KP+ + +N+TP
Sbjct: 190 --PE-PKEEENDMETDPEPIIGKRLDGKTPRLAKPTPDT-TNKTP 230
>gi|321255059|ref|XP_003193295.1| ubiquitin fusion-degradation 1-like protein [Cryptococcus gattii
WM276]
gi|317459765|gb|ADV21508.1| Ubiquitin fusion-degradation 1-like protein, putative [Cryptococcus
gattii WM276]
Length = 483
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 106/316 (33%), Positives = 168/316 (53%), Gaps = 38/316 (12%)
Query: 8 AAFERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSN--TSAG 62
+A++ ++ Y + + ++P + G KI+MPPSAL RL+ L I P F+L N +
Sbjct: 46 SAYDDYFKAYSTAVMGGRERPEVMYGGKIIMPPSALARLSALDIPSPWTFQLRNPRSPTQ 105
Query: 63 RVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDI 122
T+ GV+EFIA+EG+++LP WMM+ + L+EGD V + A L KG VK+Q + DFL +
Sbjct: 106 HTTHAGVLEFIAEEGIVHLPAWMMKRLNLEEGDPVRLTGAKLPKGKMVKIQAQSTDFLQV 165
Query: 123 SNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST-AVSIIETDCEVDFIPP 181
S+PK+VLE+ LR YS L+ D I + YN+ + ++ P +S+I+TD EVDF P
Sbjct: 166 SDPKSVLESALRFYSTLSPNDIIEITYNSLTFEFLIMSVVPEGPGISVIDTDLEVDFATP 225
Query: 182 LDFKE---PEKPSSSSLSNRTLPEVKEEPP-----LDFKGPEKPSSSSLSNRTPPEVKEE 233
+ E PE +++++ ++ P G +P +S+ +TP E
Sbjct: 226 KGYVEPPRPEPKPIPTMADKLNIDLSSNEPTASGAASVSGGSRP-GTSMGTQTPVE---- 280
Query: 234 PPKKIAKFSPFTGSGRCLNGKSSTQPTVSPSSPLIDNPQQ-NAANG---INGSKSSSASS 289
FTG G+ L+GK ++ +D+ + N A+G IN S SSA++
Sbjct: 281 ---------SFTGVGQSLSGKKVKGKGLAKKIEEVDSSSKINRADGPRIINTSSLSSANA 331
Query: 290 RQKS------GKLVFG 299
+ S GK FG
Sbjct: 332 QVPSALILPEGKFFFG 347
>gi|169154401|emb|CAQ13302.1| ubiquitin fusion degradation 1-like [Danio rerio]
Length = 148
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 67/123 (54%), Positives = 96/123 (78%), Gaps = 4/123 (3%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRCY +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 19 FSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 79 HCGVLEFVADEGFCYLPHWMMQNLLLEEGGLVQVESVNLMVATYSKFQPQSPDFLDITNP 138
Query: 126 KAV 128
KAV
Sbjct: 139 KAV 141
>gi|84994936|ref|XP_952190.1| ubiquitin fusion degradation protein (UFD1 homologue) [Theileria
annulata strain Ankara]
gi|65302351|emb|CAI74458.1| ubiquitin fusion degradation protein (UFD1 homologue), putative
[Theileria annulata]
Length = 270
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 86/202 (42%), Positives = 121/202 (59%), Gaps = 21/202 (10%)
Query: 9 AFERKYRCYPISFIDKPHLENGDK------------IVMPPSALDRLAYLHIEYPMLFEL 56
A YRC+ +SF + +E G+K I++P SAL LA +I +PM+FE+
Sbjct: 13 AHTSNYRCFSVSFAGRESMEQGNKSIFHSLIFSFSLILLPQSALHELASRNISWPMMFEI 72
Query: 57 SNTSAGRVTYCGVMEFIADEGLIYLPYWM--------MENMLLQEGDIVEVKNASLAKGS 108
N + T GV+EFI++EG +PYW+ M N+ L EGDIV + N SL K +
Sbjct: 73 LNPKNYKRTNGGVLEFISEEGTCNIPYWVIFYTIDLVMSNLGLNEGDIVTITNVSLPKAN 132
Query: 109 YVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVS 168
+VKL+P +D+ DISNP+AVLE LR+Y+ LT GD I + Y Y +++ KP+ A S
Sbjct: 133 WVKLKPLNEDYWDISNPRAVLENALRNYATLTVGDVIPIHYIQTVYLFQIMDLKPAKACS 192
Query: 169 IIETDCEVDF-IPPLDFKEPEK 189
IIETD EV+F +P + KE EK
Sbjct: 193 IIETDMEVEFDMPAPEPKEEEK 214
>gi|350592681|ref|XP_003483514.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog, partial
[Sus scrofa]
Length = 141
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 66/123 (53%), Positives = 97/123 (78%), Gaps = 4/123 (3%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRC+ +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+CGV+EF+ADEG+ YLP+WMM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NP
Sbjct: 79 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 138
Query: 126 KAV 128
KAV
Sbjct: 139 KAV 141
>gi|118354297|ref|XP_001010411.1| Ubiquitin fusion degradation protein UFD1 containing protein
[Tetrahymena thermophila]
gi|89292178|gb|EAR90166.1| Ubiquitin fusion degradation protein UFD1 containing protein
[Tetrahymena thermophila SB210]
Length = 371
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 117/181 (64%), Gaps = 4/181 (2%)
Query: 17 YPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADE 76
YP +++ LE G+KI++PPS L+ L+ ++ YPM+F + NT + TY GV+EFIA E
Sbjct: 105 YPAYMLERHDLEKGNKILLPPSVLNTLSASNLPYPMIFCVQNTYLNKQTYVGVLEFIAPE 164
Query: 77 GLIYLPYWMMENMLLQEGDIVEVKNAS-LAKGSYVKLQPHTKDFLDISNPKAVLETTLRS 135
G Y+P+WM + + +G ++V + + KG +VK+QPH F+D+ +P+A+LE LR+
Sbjct: 165 GTCYIPFWMFQMLQCFDGQQIQVTLVTDVKKGKFVKIQPHETAFIDLPDPRAILEKELRN 224
Query: 136 YSCLTTGDTIMVPYNNKKYYINVVETKPS---TAVSIIETDCEVDFIPPLDFKEPEKPSS 192
Y+ L GDTI + + + + I+++E KP+ A+ +++ + EVDF PLD+ E P+
Sbjct: 225 YTVLHQGDTIHIEFMKQHFQIDILEVKPANDYNAICVVDAEIEVDFAKPLDYVEHPLPTM 284
Query: 193 S 193
+
Sbjct: 285 T 285
>gi|145503301|ref|XP_001437627.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124404779|emb|CAK70230.1| unnamed protein product [Paramecium tetraurelia]
Length = 283
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 106/167 (63%), Gaps = 4/167 (2%)
Query: 24 KPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPY 83
+P + NG+KI++P SAL +L ++ PM+F++ +T + + TY GV+EF+A+EG +P
Sbjct: 26 RPQINNGNKILLPASALQQLIFIKQNGPMIFKIQSTQSQKFTYVGVLEFVAEEGSCIIPD 85
Query: 84 WMMENM-LLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTG 142
W+ ENM ++ SL G +K+QPH F+D+ +P+A+LE LR+Y CLT G
Sbjct: 86 WLFENMNFFNRCWVIVSLEQSLPLGKLIKIQPHETAFIDLPDPRAILENQLRNYICLTQG 145
Query: 143 DTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIPPLDFKE 186
+TI + +N KY I++V P T AV I E D E+DF+ PLD+ E
Sbjct: 146 ETITITFNKIKYMIDIVSVTPKTDKLAVCINEADVEIDFLQPLDYTE 192
>gi|405119452|gb|AFR94224.1| ubiquitin fusion degradation protein 1 [Cryptococcus neoformans
var. grubii H99]
Length = 483
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 114/185 (61%), Gaps = 6/185 (3%)
Query: 8 AAFERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSN--TSAG 62
+A++ ++ Y + + ++P + G KI+MPPSAL RL+ L I P F+L N +
Sbjct: 46 SAYDDYFKAYSTAVMGGRERPEVMYGGKIIMPPSALARLSALDIPSPWTFQLRNPRSPTQ 105
Query: 63 RVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDI 122
T+ GV+EFIA+EG+++LP WMM+ + L+EGD V + A L KG VK+Q DFL +
Sbjct: 106 HTTHAGVLEFIAEEGIVHLPAWMMKRLNLEEGDPVRLTGAKLPKGKMVKIQAQNTDFLQV 165
Query: 123 SNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST-AVSIIETDCEVDFIPP 181
S+PK+VLE+ LR YS L+ D I + YN+ + ++ P +S+I+TD EVDF P
Sbjct: 166 SDPKSVLESALRFYSTLSPDDIIEITYNSLTFEFLIMSVVPEGPGISVIDTDLEVDFATP 225
Query: 182 LDFKE 186
+ E
Sbjct: 226 KGYVE 230
>gi|440298379|gb|ELP91015.1| ubiquitin fusion degradation protein, putative [Entamoeba invadens
IP1]
Length = 255
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 136/261 (52%), Gaps = 38/261 (14%)
Query: 10 FERKYRCYPI--SFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAG-RVTY 66
F + YR Y S K +L + K+++PPS L +A + + YP+LF + VT+
Sbjct: 9 FRQTYRAYSFEKSGCGKTNLNDSGKVLLPPSTLQVMAGMSLVYPLLFWVQKYRDNTNVTH 68
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
CGV+EF A E Y+P WMM+ + + EGD VE++ +L K S+++ +P + +F I N K
Sbjct: 69 CGVLEFTAKEAECYMPPWMMQRLKIGEGDYVELRTVALPKASFIRFKPKSIEFFKIPNYK 128
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST-AVSIIETDCEVDFIPPLDFK 185
V+E LR+YS +T GD I + +N+K+Y + V E KP+T AVSI+ETD VDF
Sbjct: 129 VVMERELRNYSAMTVGDVISIGFNSKEYELEVAECKPATRAVSIVETDVAVDF------- 181
Query: 186 EPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAK----- 240
+LPE ++ + PS L + + PP+++ K
Sbjct: 182 ----------DGNSLPENQQ--------AKAPSLIDLDDDEEDDDIIMPPQRVEKQESSD 223
Query: 241 ----FSPFTGSGRCLNGKSST 257
F PF+G GR L + T
Sbjct: 224 SEETFKPFSGVGRTLRDSNDT 244
>gi|443924912|gb|ELU43858.1| ubiquitin fusion degradation protein I [Rhizoctonia solani AG-1 IA]
Length = 859
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 162/316 (51%), Gaps = 38/316 (12%)
Query: 10 FERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTS-AGRVT 65
++ + Y ++ + ++ ++ G KI++PPS+L L+ L +E P F+L N S T
Sbjct: 32 YDEYMKAYSMAMLPGRERANVSYGGKIMLPPSSLANLSDLDLESPWFFQLKNPSNQAATT 91
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+ GV+EFIA+EG +LP+WMM+ + L EGD + + N +L KG +VK+Q K+F+++S+P
Sbjct: 92 HAGVLEFIAEEGCAHLPHWMMKTLRLNEGDPIRITNTTLPKGQFVKIQAQEKEFIEVSDP 151
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPS-------TAVSIIETDCEVDF 178
KAV +LR+++ LT GD + YN + V+E KP ++II+TD EVDF
Sbjct: 152 KAV---SLRNFAALTQGDIFEIQYNMLTFSFLVMELKPDQPTGGGPAGINIIDTDLEVDF 208
Query: 179 IPPLDFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSS---SSLSNRTPPE--VKEE 233
P + EP + ++ P + E+ +D G SS SSL P +
Sbjct: 209 ATPKGYVEPVRTPAAP-----PPTMAEKLKIDLGGSTPGSSRPGSSLGIAGPSAGPSADA 263
Query: 234 PPKKIAKFSPFTGSGRCLNGKSSTQP--------TVSPSSPLI--DNPQQNAANGINGSK 283
P F PF GSG+ L G+ + V PSS +I D + + + +
Sbjct: 264 P----GGFDPFKGSGQTLAGRKTKGKGKSVRKIEEVDPSSTIIRTDKLRTMTTDDLENTA 319
Query: 284 SSSASSRQKSGKLVFG 299
+ A GKL FG
Sbjct: 320 RAPAPLGLPFGKLFFG 335
>gi|58261536|ref|XP_568178.1| ubiquitin fusion-degradation 1-like protein [Cryptococcus
neoformans var. neoformans JEC21]
gi|134115401|ref|XP_773662.1| hypothetical protein CNBI0280 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256289|gb|EAL19015.1| hypothetical protein CNBI0280 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230260|gb|AAW46661.1| ubiquitin fusion-degradation 1-like protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 516
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 115/185 (62%), Gaps = 6/185 (3%)
Query: 8 AAFERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSN--TSAG 62
+A++ ++ Y + + ++P + G KI+MPPSAL RL+ L I P F+L N +
Sbjct: 81 SAYDDYFKAYSTAVMGGRERPEVMYGGKIIMPPSALARLSALDIPSPWTFQLRNPRSPTQ 140
Query: 63 RVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDI 122
+T+ GV+EFIA+EG+++LP WMM+ + L+EGD + + A L KG VK+Q DFL +
Sbjct: 141 HITHAGVLEFIAEEGIVHLPAWMMKRLNLEEGDPIRLTGAKLPKGKMVKIQAQNTDFLQV 200
Query: 123 SNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST-AVSIIETDCEVDFIPP 181
S+PK+VLE+ LR YS L+ D I + YN+ + ++ P +S+I+TD EVDF P
Sbjct: 201 SDPKSVLESALRFYSTLSPDDIIEITYNSLTFEFLIMSVVPEGPGISVIDTDLEVDFATP 260
Query: 182 LDFKE 186
+ E
Sbjct: 261 KGYVE 265
>gi|145535850|ref|XP_001453658.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421380|emb|CAK86261.1| unnamed protein product [Paramecium tetraurelia]
Length = 283
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 161/311 (51%), Gaps = 42/311 (13%)
Query: 4 NHHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNT-SAG 62
N + ++ Y S K +L G+KI++P SAL ++ +L + PM+F L +T
Sbjct: 2 NRNFRGYQNMLEVYSASTFQKKNLNQGNKILLPASALQQVLHLKQQGPMIFRLQSTLDDK 61
Query: 63 RVTYCGVMEFIADEGLIYLPYWMMENMLLQEG-DIVEVKNASLAKGSYVKLQPHTKDFLD 121
+ TY GV+EF A+EG +P WM+E+M +G +I+ L +G +++QPH F+D
Sbjct: 62 KYTYVGVLEFTAEEGTCVVPDWMLESMGFFDGCNIIISHEKKLDQGKLIRIQPHETAFID 121
Query: 122 ISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVSIIETDCEVDF 178
+ +P+A+LE LR++ CLT G+TI + ++N Y I++V+ +P+ AV I E D E+DF
Sbjct: 122 LPDPRAILENHLRNFICLTEGETISINFHNTNYLIDIVKVEPTNNLKAVCINEADVEIDF 181
Query: 179 IPPLDFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKI 238
+ PLDF + PP +L ++ V++E +
Sbjct: 182 MKPLDFNDA-------------------PP------------NLVKKSSSLVQQEELQAQ 210
Query: 239 AKFSPFTGSGRCLNGKSSTQPTVSPSSPL--ID--NPQQNAANGINGSKSSSASSRQKSG 294
+ + FTG+G ++GK T PS + ++ NP+++ +NG K + +++
Sbjct: 211 KQQTVFTGTGVRIDGKPLTTQMRKPSEDVKPVEPYNPRKHKL--VNGLKQTEEAAQFIGS 268
Query: 295 KLVFGSNANQS 305
+ G+ Q+
Sbjct: 269 SIKLGNTGTQN 279
>gi|261332869|emb|CBH15864.1| ubiquitin fusion degradation protein, putative [Trypanosoma brucei
gambiense DAL972]
Length = 306
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 138/265 (52%), Gaps = 22/265 (8%)
Query: 10 FERKYRCYPISFID-KPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCG 68
F R +P F + +G ++++PP+ L +L+ + + YP+ F+L N G Y G
Sbjct: 11 FRGSLRAFPSVFASTDAKINSGSRVILPPTCLQKLSTMRVAYPLQFKLRNGKRGVTCYAG 70
Query: 69 VMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAV 128
V+EF A+EG I +P WM M L EG V ++ +L G +KL+P +FL +SNPK V
Sbjct: 71 VLEFSAEEGHIVMPAWMFTAMGLCEGSTVSIETCTLPPGGLIKLRPQESNFLQLSNPKNV 130
Query: 129 LETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST-----AVSIIETDCE-----VDF 178
LE L Y LT G +I++ Y ++ + I+V+ T A+S + D + V+F
Sbjct: 131 LEMRLSDYPVLTKGTSIVLDYLDRDFVIDVISITDDTGKSVDAISTVRADTQATELKVEF 190
Query: 179 IPPLDFKEPEKPSSSSLSNRTLPE----VKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEP 234
PLD P S + S R +P+ + + ++F P ++ N+ P ++P
Sbjct: 191 ERPLDM-----PPSPTESERQMPQGGNIIGADDAVEF-APFVLQPPTIGNQPQPARAKQP 244
Query: 235 PKKI-AKFSPFTGSGRCLNGKSSTQ 258
++ A F PF G GR ++GKS+ +
Sbjct: 245 KEEAKAAFVPFMGVGRRIDGKSTVE 269
>gi|71747916|ref|XP_823013.1| ubiquitin fusion degradation protein [Trypanosoma brucei TREU927]
gi|70832681|gb|EAN78185.1| ubiquitin fusion degradation protein, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 306
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 138/265 (52%), Gaps = 22/265 (8%)
Query: 10 FERKYRCYPISFID-KPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCG 68
F R +P F + +G ++++PP+ L +L+ + + YP+ F+L N G Y G
Sbjct: 11 FRGSLRAFPSVFASTDAKINSGSRVILPPTCLQKLSTMRVAYPLQFKLRNGKRGVTCYAG 70
Query: 69 VMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAV 128
V+EF A+EG I +P WM M L EG V ++ +L G +KL+P +FL +SNPK V
Sbjct: 71 VLEFSAEEGHIVMPAWMFTAMGLCEGSTVAIETCTLPPGGLIKLRPQESNFLQLSNPKNV 130
Query: 129 LETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST-----AVSIIETDCE-----VDF 178
LE L Y LT G +I++ Y ++ + I+V+ T A+S + D + V+F
Sbjct: 131 LEMRLSDYPVLTKGTSIVLDYLDRDFVIDVISITDDTGKSVDAISTVRADTQATELKVEF 190
Query: 179 IPPLDFKEPEKPSSSSLSNRTLPE----VKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEP 234
PLD P S + S R +P+ + + ++F P ++ N+ P ++P
Sbjct: 191 ERPLDM-----PPSPTESERQMPQGGNIIGADDAVEF-APFVLQPPTIGNQPQPARTKQP 244
Query: 235 PKKI-AKFSPFTGSGRCLNGKSSTQ 258
++ A F PF G GR ++GKS+ +
Sbjct: 245 KEEAKAAFVPFMGVGRRIDGKSTVE 269
>gi|299471003|emb|CBN78864.1| putative ubiquitin fusion-degradation protein [Ectocarpus
siliculosus]
Length = 1016
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 113/184 (61%), Gaps = 24/184 (13%)
Query: 12 RKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAG--RVT---- 65
+ Y+C+ ++ +D+P LE GDKI+MP +A L ++ P+LF+L NT G R+
Sbjct: 23 KTYQCHSMACLDRPGLELGDKIIMPQAAFHEAHRLRLKLPLLFKLVNTDVGTRRIMGTTG 82
Query: 66 -----YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAK---GSYVKLQPHTK 117
+CGV+EF A E ++LPYW+M+N+LL EG VE++ S+ + GS+V+ +PH +
Sbjct: 83 PSPSQFCGVLEFSAPEDQVFLPYWLMQNLLLSEGGRVELR--SILRPPAGSFVRFKPHDE 140
Query: 118 DFLDIS---NPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETK-----PSTAVSI 169
FL ++ PKA++E LR YS L+ G TI+V + ++++V+E + P+T VS
Sbjct: 141 AFLGVAAKQGPKALMEFALRRYSVLSEGATILVQHEGDNFFLDVMELRTFDSAPATVVSD 200
Query: 170 IETD 173
+ D
Sbjct: 201 GDGD 204
>gi|164655576|ref|XP_001728917.1| hypothetical protein MGL_3911 [Malassezia globosa CBS 7966]
gi|159102805|gb|EDP41703.1| hypothetical protein MGL_3911 [Malassezia globosa CBS 7966]
Length = 385
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/266 (35%), Positives = 134/266 (50%), Gaps = 23/266 (8%)
Query: 9 AFERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRV- 64
A+E ++ Y +S ++ + G K++MPPSAL + L +E P F T R
Sbjct: 40 AYEDYFKAYHMSRFPGRERKDVSYGGKVIMPPSALSTITDLELESPWTFAFRGTGRSRSQ 99
Query: 65 -TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDIS 123
T+ GV+EFIA+EG +YLP W L KG +VKLQP T DFL+IS
Sbjct: 100 RTHAGVVEFIAEEGKVYLPSW----------------GTRLPKGKFVKLQPQTVDFLEIS 143
Query: 124 NPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKP-STAVSIIETDCEVDFIPPL 182
+PKAVLE LR+Y LT GD I + YN + I ++E +P + ++IIETD EVDF PP
Sbjct: 144 DPKAVLEQALRNYPTLTKGDIIEISYNCLTFEILIMEVQPDAEGITIIETDLEVDFAPPK 203
Query: 183 DFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPS-SSSLSNRTPPEVKEEPPKKIAKF 241
+ EP + ++ D P S SL+N + V + +
Sbjct: 204 GYVEPTPQPRAPPPTMASKLRIDQDKHDIILPAHGSVGRSLANASSKTVGVATKETSSVA 263
Query: 242 SPFTGSGRCLNGKSSTQPTVSPSSPL 267
+PF G G+ L+GK + P +PL
Sbjct: 264 APFKGMGQTLSGKKTKGKKDKPITPL 289
>gi|348679632|gb|EGZ19448.1| hypothetical protein PHYSODRAFT_312658 [Phytophthora sojae]
Length = 376
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 99/167 (59%), Gaps = 10/167 (5%)
Query: 25 PHLENGDKIVMPPSALDRLAYLHIEYPMLFEL-----SNTSAGRVTYCGVMEFIADEGLI 79
PHLE GDK+V+PP L L I P F + ++T + YC V EF A EG +
Sbjct: 2 PHLEFGDKVVLPPKILLELQCSKITTPFQFTIRAAGVNSTEENSLQYCSVQEFSAPEGQV 61
Query: 80 YLPYWMMENMLLQEGDIVEVKNAS-LAKGSYVKLQPHTKDFLDIS---NPKAVLETTLRS 135
+LPYW+M N+ + EG V V + + L +G Y +LQP T FLD++ PK ++ET LR
Sbjct: 62 FLPYWLMHNLHVPEGGSVVVSSVTDLPRGIYCRLQPETTSFLDLAAEVGPKLLMETALRR 121
Query: 136 YSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSII-ETDCEVDFIPP 181
YS L+ TI++ Y N +YY+ V E KP+ VS+ + D E DF+PP
Sbjct: 122 YSVLSVNSTIVIEYGNVRYYVRVAELKPAAVVSLCGDVDLETDFMPP 168
>gi|183230750|ref|XP_001913478.1| ubiquitin fusion degradation protein 1 homolog [Entamoeba
histolytica HM-1:IMSS]
gi|169802778|gb|EDS89746.1| ubiquitin fusion degradation protein 1 homolog, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 254
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 126/232 (54%), Gaps = 23/232 (9%)
Query: 24 KPHLENGDKIVMPPSALDRLAYLHIEYPMLFELS-NTSAGRVTYCGVMEFIADEGLIYLP 82
+ ++ G KI +PPS L +A L++ YP+ F ++ + + +T+CGV+EF A+EG P
Sbjct: 26 QKQMDVGGKIFLPPSTLASMASLNLVYPLTFRVNKHRNNNIITHCGVLEFTANEGECIAP 85
Query: 83 YWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTG 142
W+M+ + L +GD ++++ +L K +++L+P DF I N + V+E LR+YS LTTG
Sbjct: 86 QWLMKRLNLVDGDYIDLQTVNLPKAKFIRLKPLAFDFFKIPNYRVVMEKELRNYSTLTTG 145
Query: 143 DTIMVPYNNKKYYINVVETKP-STAVSIIETDCEVDFIPPLDFKE--PEKPSSSSLSNRT 199
D I + +NNK+Y + V E KP AVS++ETD VDF DF E P + +SS
Sbjct: 146 DIISISFNNKEYQLEVAECKPEGKAVSVVETDVLVDF-DGNDFAENAPTQQDNSS----- 199
Query: 200 LPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTGSGRCL 251
EE + F T KEE +F PF+G G L
Sbjct: 200 ----DEEEDIGF---------CFGGTTEEIKKEEVSDDSEEFKPFSGVGHSL 238
>gi|449710420|gb|EMD49498.1| ubiquitin fusion degradation family protein [Entamoeba histolytica
KU27]
Length = 254
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 126/232 (54%), Gaps = 23/232 (9%)
Query: 24 KPHLENGDKIVMPPSALDRLAYLHIEYPMLFELS-NTSAGRVTYCGVMEFIADEGLIYLP 82
+ ++ G KI +PPS L +A L++ YP+ F ++ + + +T+CGV+EF A+EG P
Sbjct: 26 QKQMDVGGKIFLPPSTLASMASLNLVYPLTFRVNKHRNNNIITHCGVLEFTANEGECIAP 85
Query: 83 YWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTG 142
W+M+ + L +GD ++++ +L K +++L+P DF I N + V+E LR+YS LTTG
Sbjct: 86 QWLMKRLNLVDGDYIDLQTVNLPKAKFIRLKPLAFDFFKIPNYRVVMEKELRNYSTLTTG 145
Query: 143 DTIMVPYNNKKYYINVVETKP-STAVSIIETDCEVDFIPPLDFKE--PEKPSSSSLSNRT 199
D I + +NNK+Y + V E KP AVS++ETD VDF DF E P + +SS
Sbjct: 146 DIISISFNNKEYQLEVAECKPEGKAVSVVETDVLVDF-DGNDFAENAPTQQDNSS----- 199
Query: 200 LPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTGSGRCL 251
EE + F T KEE +F PF+G G L
Sbjct: 200 ----DEEKDIGF---------CFGGTTEEIKKEEVSDDSEEFKPFSGVGHSL 238
>gi|301099548|ref|XP_002898865.1| ubiquitin fusion degradation protein, putative [Phytophthora
infestans T30-4]
gi|262104571|gb|EEY62623.1| ubiquitin fusion degradation protein, putative [Phytophthora
infestans T30-4]
Length = 357
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 71/172 (41%), Positives = 101/172 (58%), Gaps = 15/172 (8%)
Query: 25 PHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTS----------AGRVTYCGVMEFIA 74
PHLE GDKIV+PP L L L I P+LF + + S YC V EF A
Sbjct: 2 PHLEFGDKIVLPPKILLELQCLKIPTPLLFMVRSASQDLHFERYPDVCTRQYCSVQEFSA 61
Query: 75 DEGLIYLPYWMMENMLLQEGDIVEVKNA-SLAKGSYVKLQPHTKDFLDIS---NPKAVLE 130
+G ++LPYW+M+N+ + EGD V V + +L +G Y + QP + FLD++ PK ++E
Sbjct: 62 PDGQVFLPYWLMQNLRVPEGDWVVVTSVVNLPRGIYCRFQPESTSFLDLAAEIGPKLLME 121
Query: 131 TTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSII-ETDCEVDFIPP 181
T LR YS L+ G TI++ Y +Y++ V E KP+ VS+ + D E DF+PP
Sbjct: 122 TALRRYSVLSMGSTIVIEYGTVRYHVQVAELKPAPVVSLCGDVDLETDFMPP 173
>gi|440798716|gb|ELR19783.1| ubiquitin fusion degradation protein, putative [Acanthamoeba
castellanii str. Neff]
Length = 556
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 107/178 (60%), Gaps = 8/178 (4%)
Query: 9 AFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHI-------EYPMLFELSNTSA 61
F Y C +FI +P L G KI++P SAL + + + P++FELSN +
Sbjct: 166 GFYTTYVCNTPAFIGRPELNYGGKILLPASALQEIVSKDVAGKQFLSDSPLVFELSNPAN 225
Query: 62 GRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKD-FL 120
G+ TY GVMEF+A+EG P+W+M+++ L EGD V V+ +L KG++VK + H F+
Sbjct: 226 GKKTYAGVMEFLAEEGHANAPFWLMQHLELTEGDDVNVRLVTLPKGTFVKFKAHDSHFFV 285
Query: 121 DISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDF 178
+PK + ET LR+++ L+ GD I + ++ Y+ V+ET+P TA+ I D EV+F
Sbjct: 286 RYPDPKPIFETVLRNFAALSQGDHIDITFDAITYHFEVLETQPHTAIDINNVDIEVEF 343
>gi|407038041|gb|EKE38918.1| ubiquitin fusion degradation protein 1 family protein, putative
[Entamoeba nuttalli P19]
Length = 254
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 126/232 (54%), Gaps = 23/232 (9%)
Query: 24 KPHLENGDKIVMPPSALDRLAYLHIEYPMLFELS-NTSAGRVTYCGVMEFIADEGLIYLP 82
+ ++ G KI +PPS L +A L++ YP+ F ++ + + +T+CGV+EF A+EG P
Sbjct: 26 QKQMDLGGKIFLPPSTLASMASLNLVYPLTFRVNKHRNNNIITHCGVLEFTANEGECIAP 85
Query: 83 YWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTG 142
W+M+ + L +GD ++++ +L K +++L+P T DF I N + V+E LR+YS LTTG
Sbjct: 86 QWLMKRLNLVDGDYIDLQTVNLPKAKFIRLKPLTFDFFKIPNYRVVMEKELRNYSTLTTG 145
Query: 143 DTIMVPYNNKKYYINVVETKP-STAVSIIETDCEVDFIPPLDFKE--PEKPSSSSLSNRT 199
D I + +NNK+Y + V E KP AVS++ETD VDF F E P + +SS
Sbjct: 146 DIISISFNNKEYQLEVAECKPEGKAVSVVETDVLVDF-DGNGFVENAPTQQDNSS----- 199
Query: 200 LPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTGSGRCL 251
EE + F T KEE +F PF+G G L
Sbjct: 200 ----DEEEDIGF---------CFGGTTEEIKKEELSDDSEEFKPFSGVGHSL 238
>gi|2645877|gb|AAB87522.1| Ufd1p [Schizosaccharomyces pombe]
Length = 205
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/125 (49%), Positives = 90/125 (72%), Gaps = 3/125 (2%)
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
T+ GV+EFIA+EG +YLPYWMM + L+ GD+V V N +A+GSYVKLQP + +FLDI++
Sbjct: 2 THGGVLEFIAEEGRVYLPYWMMTTLSLEPGDLVRVINTDIAQGSYVKLQPQSVNFLDITD 61
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTA---VSIIETDCEVDFIPP 181
+AVLE LR++S LT D + YN++ Y I V++ +P + VS++ETD VDF PP
Sbjct: 62 HRAVLENALRNFSTLTKSDIFEILYNDQVYQIKVIDVQPDDSRHVVSVVETDLVVDFDPP 121
Query: 182 LDFKE 186
+ ++E
Sbjct: 122 IGYEE 126
>gi|167381340|ref|XP_001735671.1| ubiquitin fusion degradaton protein [Entamoeba dispar SAW760]
gi|165902232|gb|EDR28117.1| ubiquitin fusion degradaton protein, putative [Entamoeba dispar
SAW760]
Length = 254
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 124/223 (55%), Gaps = 21/223 (9%)
Query: 32 KIVMPPSALDRLAYLHIEYPMLFELS-NTSAGRVTYCGVMEFIADEGLIYLPYWMMENML 90
KI +PPS L +A L++ YP+ F L+ + + +T+CGV+EF A+EG P W+M+ +
Sbjct: 34 KIFLPPSTLASMASLNLVYPLTFRLNKHRNNSVITHCGVLEFTANEGECIAPQWLMKRLS 93
Query: 91 LQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDTIMVPYN 150
L +GD ++++ +L K +++L+P DF I N + V+E LR+YS LT GD I + +N
Sbjct: 94 LVDGDYIDIQTVNLPKAKFIRLKPLVFDFFKIPNYRVVMEKELRNYSTLTIGDIIGISFN 153
Query: 151 NKKYYINVVETKP-STAVSIIETDCEVDFIPPLDFKEPEKPSSSSLSNRTLPEVKEEPPL 209
NK+Y + V E KP AVSI+ETD VDF D + + +S+ N + + E+
Sbjct: 154 NKEYQLEVAECKPEGKAVSIVETDVLVDF----DGNDLAENASTQQDNSS--DEDEDIGF 207
Query: 210 DFKGPEKPSSSSLSNRTPPEV-KEEPPKKIAKFSPFTGSGRCL 251
F G T E+ KEE +F PF+G G L
Sbjct: 208 CFGG------------TTEEIKKEESSDDSEEFKPFSGVGHSL 238
>gi|119623442|gb|EAX03037.1| ubiquitin fusion degradation 1 like (yeast), isoform CRA_a [Homo
sapiens]
Length = 220
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 103/183 (56%), Gaps = 30/183 (16%)
Query: 85 MMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDT 144
MM+N+LL+EG +V+V++ +L +Y K QP + DFLDI+NPKAVLE LR+++CLTTGD
Sbjct: 11 MMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDV 70
Query: 145 IMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEKPSSSSLSNRTLPEVK 204
I + YN K Y + V+ETKP AVSIIE D VDF PL +KEPE+ +V+
Sbjct: 71 IAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPER------------QVQ 118
Query: 205 EEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTGSGRCLNG-KSSTQPTVSP 263
E + + + L F F+GSG L+G K +P+ SP
Sbjct: 119 HEESTEGEADHSGYAGELG-----------------FRAFSGSGNRLDGKKKGVEPSPSP 161
Query: 264 SSP 266
P
Sbjct: 162 IKP 164
>gi|290992192|ref|XP_002678718.1| ubiquitin fusion-degradation protein [Naegleria gruberi]
gi|284092332|gb|EFC45974.1| ubiquitin fusion-degradation protein [Naegleria gruberi]
Length = 771
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 117/187 (62%), Gaps = 12/187 (6%)
Query: 8 AAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYL-HIEYPMLFELSNTSAGRVTY 66
+AF + RC+ + ++ LE G+K+++PP A D++ ++E+P++FE+ T RV Y
Sbjct: 444 SAFSK--RCFDVK-VNLSALEKGNKVLLPPEAADKIFNDPNVEFPLIFEI-QTKHSRV-Y 498
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
CGV EF + I +P WM +++ + EG V ++ L SY+K+QPH+K F +I N K
Sbjct: 499 CGVSEFTSPSNNIVVPEWMFKSLFITEGAKVSIRCVKLLPASYIKIQPHSKTFYNIENYK 558
Query: 127 AVLETTLRSYSCLTTGDTIMV-PYNNKKYYINVVETKPSTAVSIIE-----TDCEVDFIP 180
VLETTL YSC+ G ++ V ++K + I ++ET+PSTAVS++ + E+DF+P
Sbjct: 559 QVLETTLSRYSCVAEGQSLQVYDESDKIHMIEIMETQPSTAVSVLAESSGFMEVEIDFVP 618
Query: 181 PLDFKEP 187
LD +P
Sbjct: 619 ALDLYDP 625
>gi|255761616|gb|ACU32851.1| ubiquitin fusion degradation protein 1 [Toxoplasma gondii]
Length = 296
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 101/189 (53%), Gaps = 39/189 (20%)
Query: 8 AAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYC 67
+ F + Y C+P+SFI K +E G+KI++P SAL LA LHI +PMLFE+ N + R T+
Sbjct: 21 SGFSQCYSCFPVSFIGKDEMEKGNKILLPQSALHALARLHISWPMLFEVVNEAKDRRTHT 80
Query: 68 GVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKA 127
GV+EF+A+EG + PYW + A+G
Sbjct: 81 GVLEFVAEEGTCHFPYW------------------ASAQG-------------------- 102
Query: 128 VLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEP 187
LE LR Y+ LT GD I +P+ +K + + V + +P+ AVSIIETD EV+F P + EP
Sbjct: 103 -LEVALRGYAALTVGDLIYLPFLDKGFQLLVTDLRPAPAVSIIETDMEVEFKAPEGYVEP 161
Query: 188 EKPSSSSLS 196
+ S S
Sbjct: 162 TVRAKQSTS 170
>gi|226489140|emb|CAX74919.1| Ubiquitin fusion degradation protein 1 homolog [Schistosoma
japonicum]
Length = 215
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 104/195 (53%), Gaps = 24/195 (12%)
Query: 85 MMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDT 144
M++N+ L+EG +V V NA+L S+ + QP + DFLDISNPKAVLE LR ++CLT GD
Sbjct: 1 MLKNLDLEEGGLVSVVNAALPVASFARFQPQSTDFLDISNPKAVLENALRDFACLTVGDI 60
Query: 145 IMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEKPSSSSLSNRTLPEVK 204
I + YN + Y + V+ETKP AV+IIE D VDF PP+ ++ + S S L N +++
Sbjct: 61 IAISYNERIYELKVLETKPKDAVTIIECDMSVDFAPPVGYQSTDSGSLSKLDNVDAHQIE 120
Query: 205 EEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTGSGRCLNGKSSTQPTVSPS 264
E+ E P + F F+G+G L+GK+ T +
Sbjct: 121 ED------------------------HIEIPSLVQGFQAFSGTGYRLDGKTKQDKTNETN 156
Query: 265 SPLIDNPQQNAANGI 279
S P +N G+
Sbjct: 157 SDRPLGPSKNRERGV 171
>gi|341884132|gb|EGT40067.1| hypothetical protein CAEBREN_28809 [Caenorhabditis brenneri]
Length = 337
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 93/142 (65%), Gaps = 4/142 (2%)
Query: 45 YLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASL 104
+LH + F+L+N +A +VT+CGV+EF A EG LP+WMM+ + L +GD V +++A++
Sbjct: 65 HLH----LFFQLTNMAAQKVTHCGVLEFSAPEGQAILPHWMMQQLNLCDGDTVRIESATV 120
Query: 105 AKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPS 164
K ++ KL+P + +FL+ISNPKAVLE LR Y+CLT D I Y + VV+ KP+
Sbjct: 121 PKATFAKLKPMSLEFLNISNPKAVLEVELRKYACLTKNDRIPTSYAGQTLEFLVVDVKPA 180
Query: 165 TAVSIIETDCEVDFIPPLDFKE 186
+V IIE D +DF P + E
Sbjct: 181 NSVCIIECDVNLDFDAPEGYVE 202
>gi|449453521|ref|XP_004144505.1| PREDICTED: uncharacterized protein LOC101203089 [Cucumis sativus]
gi|449493141|ref|XP_004159204.1| PREDICTED: uncharacterized LOC101203089 [Cucumis sativus]
Length = 571
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/175 (41%), Positives = 103/175 (58%), Gaps = 18/175 (10%)
Query: 25 PHLENGDKIVMPPS---------ALDR------LAYLHIEYPMLFELSNTSAGRVTYCGV 69
P+ NGDKI + PS A D+ L+ +H E P E++ R T+ GV
Sbjct: 86 PYQGNGDKIKLSPSSFTELSDQGAFDKGPVYFQLSVVHQEGPSNSEVTKEKTHRATHSGV 145
Query: 70 MEFIADEGLIYLPYWMMENMLLQEGD---IVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
+EF ADEG + LP + +N+ L E +VEV+ L KG+Y KLQP FLD+ N K
Sbjct: 146 LEFTADEGFVELPPHVWQNLFLDESLTKPLVEVRYVWLPKGTYAKLQPEGLGFLDLPNHK 205
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPP 181
A+LET+LR ++ L+ GD + V Y Y +NV+E KPS+++S++ETD EVD + P
Sbjct: 206 AILETSLRQHATLSQGDILTVVYGELTYKLNVLELKPSSSISVLETDIEVDIVGP 260
>gi|300175403|emb|CBK20714.2| unnamed protein product [Blastocystis hominis]
Length = 187
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 104/164 (63%), Gaps = 6/164 (3%)
Query: 28 ENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMME 87
E GDKI++P A+ + +YP++F +SN S +YCGV EF A E Y+P W+M
Sbjct: 9 EYGDKIILPEMAMAYINGTTAQYPLMFRISNGSQS--SYCGVKEFSAPERNCYVPRWIMA 66
Query: 88 NMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDTIMV 147
+ + GD + V+N +L K ++VKL+ F ++SNP+A+LE L+++S L+ GD+I +
Sbjct: 67 KLRISPGDYLIVENLNLRKATFVKLKFRDGTFGELSNPRAILEIKLKNFSVLSKGDSITI 126
Query: 148 PYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEKPS 191
+ K+Y I++++T+P V I+ETD EVD +++ E EK S
Sbjct: 127 EHLGKEYIIDIIDTQPDDVVVIVETDVEVD----IEYAEVEKIS 166
>gi|407849648|gb|EKG04327.1| ubiquitin fusion degardation protein, putative [Trypanosoma cruzi]
Length = 308
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 131/266 (49%), Gaps = 28/266 (10%)
Query: 9 AFERKYRCYPISFIDKPHL-ENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYC 67
F ++ YP F ++ L + G ++++P S L ++ +++ YP+ F + + + V Y
Sbjct: 10 VFRKQLAAYPGEFSERGELVDGGGRVLLPSSCLAEISTMNVAYPLQFCIRSRHS--VCYA 67
Query: 68 GVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKA 127
GV+EF AD G++ +P WM +LLQ GD V ++ L G VKL+P F+ +S+P+
Sbjct: 68 GVLEFNADNGIVIMPLWMFSALLLQPGDTVSLETCVLPSGKLVKLRPQQSSFIHLSDPRQ 127
Query: 128 VLETTLRSYSCLTTGDTIMVPYNNKKYYINVVET-----KPSTAVSIIETDCE-----VD 177
VLE L Y LT G +IM+ Y ++ + I+V++ + A+S + D + V+
Sbjct: 128 VLEMHLSHYPVLTRGTSIMLHYLDRDFIIDVIDITDELDRSVDAISTVRADAQATELKVE 187
Query: 178 FIPPLDF----KEPEKPSSSSLSNRTLPEVKEEPPLDFKGP-----EKPSSSSLSNRTPP 228
F PLD E E P + E E P K P ++ S+ +NR
Sbjct: 188 FERPLDMPLTPSENEVPVQEGTNVIGTAEGVEFAPFVLKHPTIVKEKEEKSTETTNR--- 244
Query: 229 EVKEEPPKKIAKFSPFTGSGRCLNGK 254
E + F PFTG GR +N K
Sbjct: 245 ---EGKDQTKPGFVPFTGGGRRVNDK 267
>gi|407404692|gb|EKF30051.1| ubiquitin fusion degardation protein, putative [Trypanosoma cruzi
marinkellei]
Length = 308
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 129/267 (48%), Gaps = 30/267 (11%)
Query: 9 AFERKYRCYPISFIDKPHL-ENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYC 67
F ++ YP F ++ L + G ++++P S L ++ +++ YP+ F + + V Y
Sbjct: 10 VFRKQLAAYPGEFSERGELVDGGGRVLLPSSCLAEISTMNVAYPLQFCIRSRHG--VCYA 67
Query: 68 GVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKA 127
GV+EF AD G++ +P WM +LLQ GD V ++ L G VKL+P F+ +S+P+
Sbjct: 68 GVLEFNADNGIVIMPLWMFSALLLQPGDTVSLETCVLPSGKLVKLRPQQSSFIHLSDPRQ 127
Query: 128 VLETTLRSYSCLTTGDTIMVPYNNKKYYINVVET-----KPSTAVSIIETDCE-----VD 177
VLE L Y LT G +IM+ Y ++ + I+V++ + A+S + D + V+
Sbjct: 128 VLEMHLSHYPVLTRGTSIMLHYLDRDFIIDVIDITDELDRSVEAISTVRADAQATELKVE 187
Query: 178 FIPPLDF----KEPEKPSSSSLSNRTLPEVKEEPPLDFKGP------EKPSSSSLSNRTP 227
F PLD E E P + E E P K P EK S+ + +
Sbjct: 188 FERPLDMPLTPSENELPVQEGTNVIGSAEGVEFAPFVLKRPTIVKEKEKKSTETTNQERK 247
Query: 228 PEVKEEPPKKIAKFSPFTGSGRCLNGK 254
+ K F PFTG GR +N K
Sbjct: 248 DQTK-------PGFVPFTGGGRRVNDK 267
>gi|342184410|emb|CCC93892.1| putative ubiquitin fusion degradation protein [Trypanosoma
congolense IL3000]
Length = 316
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 144/280 (51%), Gaps = 29/280 (10%)
Query: 9 AFERKYRCYPISFI-DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYC 67
FE++ R + +F D ++ G ++++PP L+ L+ + YP+ F + GRV Y
Sbjct: 6 VFEKRLRAFSSNFAPDSSKIDGGGRVLLPPGCLEELSKKSVAYPLQFRIEYN--GRVCYG 63
Query: 68 GVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKA 127
GV+EFIA+EG I +P WM ++L+ V +K +L GS VKL+P F+++S+P+
Sbjct: 64 GVLEFIAEEGTIIMPDWMFSTLMLEPNKTVSIKTCTLLPGSLVKLRPQQSQFIELSDPRY 123
Query: 128 VLETTLRSYSCLTTGDTIMVPYNNKKYYINVVET-----KPSTAVSIIETDCE-----VD 177
VLE L Y LT G TI++ Y + ++ I+V++ + A+S + D + V
Sbjct: 124 VLEMHLSQYPVLTRGTTIVLNYLDIEFLIDVIDITNDAGQSLEAISTVRADSQATEVKVV 183
Query: 178 FIPPLDF------KEPEK--PSSSSLSNRTLPEVKEEPPLDFK----GPEKPSSSSLSNR 225
F PLD +EPE + ++ SN L PL+F G +++ N
Sbjct: 184 FERPLDMPPSPTEREPEAFFATDTNDSNNAL----NFSPLEFTPPTIGGGVAGGANMKNT 239
Query: 226 TPPEVKEEPPKKIAKFSPFTGSGRCLNGKSSTQPTVSPSS 265
P+ KE+ +K F PF G G LN +++ ++ S+
Sbjct: 240 DYPKEKEKEEEKKPSFIPFVGKGCRLNEGTNSAGGITSSN 279
>gi|396082312|gb|AFN83922.1| ubiquitin fusion degradation protein 1 [Encephalitozoon romaleae
SJ-2008]
Length = 227
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 102/172 (59%), Gaps = 4/172 (2%)
Query: 18 PISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEG 77
PI F G K+++P S L L I+ P FE+S++ T+CGV+EF +EG
Sbjct: 19 PIKFDGGNQNNFGGKVIVPQSVLVDLVSFQIQPPFTFEISHSDGIYKTHCGVLEFTGEEG 78
Query: 78 LIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYS 137
+ +P WM + + +++ D V ++ + G +VKL PH+ DFL+I NPK LE+ LR+Y
Sbjct: 79 QVVVPSWMYQQLAMEDADEVVLRYMTFPIGKFVKLIPHSVDFLEIENPKLELESCLRNYQ 138
Query: 138 CLTTGDTIMVPYN---NKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
L+ GD I+ ++ + ++ + +E PS AV I++TD VDF+ P+ FK+
Sbjct: 139 VLSEGDEILCQFDEIGSIRFTVAHIE-PPSNAVYIVDTDLAVDFLEPIGFKD 189
>gi|256078326|ref|XP_002575447.1| ubiquitin fusion degradaton protein [Schistosoma mansoni]
Length = 286
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 100/176 (56%), Gaps = 25/176 (14%)
Query: 85 MMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDT 144
M++N+ L+EG +V V NA+L S+ + QP + DFLDISNPKAVLE LR ++CLT GD
Sbjct: 1 MLKNLHLEEGGLVSVVNAALPVASFARFQPQSTDFLDISNPKAVLENALRDFACLTVGDI 60
Query: 145 IMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEKPSSSSLSNRTLPEVK 204
I + YN + Y + V+ETKP AV+IIE D VDF PP+ ++ + SSS S++ L +++
Sbjct: 61 IAINYNERIYELKVLETKPKDAVTIIECDMSVDFAPPVGYQPTDSSSSSKQSDKDLHQIE 120
Query: 205 EEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTGSGRCLNGKSSTQPT 260
E+ + P + F F+G+G L+GK+ T
Sbjct: 121 EDIKI-------------------------PSVVQGFQAFSGTGYRLDGKNKQDKT 151
>gi|402465665|gb|EJW01375.1| hypothetical protein EDEG_00463 [Edhazardia aedis USNM 41457]
Length = 229
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 90/158 (56%), Gaps = 1/158 (0%)
Query: 30 GDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENM 89
G K ++P L L + I P FE+S+ T CGV++F A++ I +P WM + +
Sbjct: 32 GGKCILPQIILAELFEMEIPTPYTFEISHCGGVFKTNCGVLDFTAEDLTITVPEWMYQQL 91
Query: 90 LLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDTIMVPY 149
L D + +K L KG YVKL PH+ +FLDI NPK LE TLR+Y LT GD I+ +
Sbjct: 92 DLAGTDKITLKIVVLPKGRYVKLLPHSHEFLDIENPKRELEKTLRNYQVLTQGDEILCNF 151
Query: 150 NNKKYYINVVETKPS-TAVSIIETDCEVDFIPPLDFKE 186
V E KP+ V I++TD EV+F+PP ++E
Sbjct: 152 EEGNMRFTVAEVKPAGLGVYIVDTDLEVEFLPPFGYEE 189
>gi|303391136|ref|XP_003073798.1| ubiquitin fusion degradation protein 1 [Encephalitozoon
intestinalis ATCC 50506]
gi|303302946|gb|ADM12438.1| ubiquitin fusion degradation protein 1 [Encephalitozoon
intestinalis ATCC 50506]
Length = 227
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 95/159 (59%), Gaps = 2/159 (1%)
Query: 30 GDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENM 89
G K+++P S L L I+ P FE+S++ T+CGV+EF +EG + +P WM + +
Sbjct: 31 GGKVIVPQSVLVDLVSFQIQPPFTFEISHSDGVFKTHCGVLEFTGEEGQVVVPSWMYQQL 90
Query: 90 LLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDTIMVPY 149
+ + D VE+K + G +VKL PH+ DFL++ NPK LE LR+Y L+ GD I+ +
Sbjct: 91 SMGDVDKVELKYMTFPLGRFVKLIPHSVDFLEVENPKQELELCLRNYQVLSEGDEILFQF 150
Query: 150 NN-KKYYINVVETKP-STAVSIIETDCEVDFIPPLDFKE 186
+ V +P S+AV I++TD VDF+ P+ FK+
Sbjct: 151 DEVGSMRFTVAHIEPSSSAVYIVDTDLAVDFLEPIGFKD 189
>gi|401827801|ref|XP_003888193.1| ubiquitin fusion-degradation protein [Encephalitozoon hellem ATCC
50504]
gi|392999393|gb|AFM99212.1| ubiquitin fusion-degradation protein [Encephalitozoon hellem ATCC
50504]
Length = 227
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 95/159 (59%), Gaps = 2/159 (1%)
Query: 30 GDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENM 89
G K+++P S L L I+ P FE+S++ T+CGV+EF +EG I +P WM + +
Sbjct: 31 GGKVIVPQSVLVDLVSFQIQPPFTFEISHSDGVYKTHCGVLEFTGEEGQIVVPSWMYQQL 90
Query: 90 LLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDTIMVPY 149
+++ D + ++ + G +VKL PH+ DFL+I NPK LE+ LR+Y L+ GD I+ +
Sbjct: 91 SMEDADRIVLRYMTFPLGRFVKLIPHSVDFLEIENPKLELESCLRNYQVLSEGDEILCQF 150
Query: 150 NN-KKYYINVVETKP-STAVSIIETDCEVDFIPPLDFKE 186
+ V +P S AV I++TD VDF+ P+ FK+
Sbjct: 151 DEVGSIRFTVAHIEPLSNAVYIVDTDLAVDFLEPIGFKD 189
>gi|449329902|gb|AGE96170.1| ubiquitin fusion degradation protein 1 [Encephalitozoon cuniculi]
Length = 227
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 96/159 (60%), Gaps = 2/159 (1%)
Query: 30 GDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENM 89
G K+++P S L L I+ P FE+S+++ T+CGV+EF +EG + +P WM + +
Sbjct: 31 GGKVIVPQSVLVDLVSFQIQPPFTFEISHSNGIYRTHCGVLEFTGEEGDVVVPSWMYQQL 90
Query: 90 LLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDTIMVPY 149
+++ D V ++ + G +VKL PH+ DFL+I NPK LE+ LR+Y L+ GD I+ +
Sbjct: 91 SMEDADKVVLRYMTFPLGKFVKLIPHSVDFLEIENPKVELESCLRNYQVLSEGDEILCQF 150
Query: 150 NN-KKYYINVVETKPST-AVSIIETDCEVDFIPPLDFKE 186
+ V +PS A+ I++TD VDF+ P+ FK+
Sbjct: 151 DEVGSIRFTVAHIEPSANAIYIVDTDLAVDFLEPIGFKD 189
>gi|19074727|ref|NP_586233.1| UBIQUITIN FUSION DEGRADATION PROTEIN 1 [Encephalitozoon cuniculi
GB-M1]
gi|19069369|emb|CAD25837.1| UBIQUITIN FUSION DEGRADATION PROTEIN 1 [Encephalitozoon cuniculi
GB-M1]
Length = 227
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 95/159 (59%), Gaps = 2/159 (1%)
Query: 30 GDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENM 89
G K+++P S L L I+ P FE+S++ T+CGV+EF +EG + +P WM + +
Sbjct: 31 GGKVIVPQSVLVDLVSFQIQPPFTFEISHSDGIYRTHCGVLEFTGEEGDVVVPSWMYQQL 90
Query: 90 LLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDTIMVPY 149
+++ D V ++ + G +VKL PH+ DFL+I NPK LE+ LR+Y L+ GD I+ +
Sbjct: 91 SMEDADKVVLRYMTFPLGKFVKLIPHSVDFLEIENPKVELESCLRNYQVLSEGDEILCQF 150
Query: 150 NN-KKYYINVVETKPST-AVSIIETDCEVDFIPPLDFKE 186
+ V +PS A+ I++TD VDF+ P+ FK+
Sbjct: 151 DEVGSIRFTVAHIEPSANAIYIVDTDLAVDFLEPIGFKD 189
>gi|357493375|ref|XP_003616976.1| Ubiquitin fusion degradation protein-like protein [Medicago
truncatula]
gi|355518311|gb|AES99934.1| Ubiquitin fusion degradation protein-like protein [Medicago
truncatula]
Length = 571
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 102/181 (56%), Gaps = 19/181 (10%)
Query: 25 PHLENGDKIVMPPSALDRLAYLHI--EYPMLFELSNTSAGR-------------VTYCGV 69
P+ +GDKI +PPS L+ + PM F+LS T T+ GV
Sbjct: 86 PYQGSGDKIKLPPSCFTDLSDHGALDKGPMYFQLSLTHKEGSSSTQDTDKEKMGTTHSGV 145
Query: 70 MEFIADEGLIYLPYWMMENML----LQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNP 125
+EF ADEG + LP + N+ + E ++EV+ L KG+Y KLQP F D+ N
Sbjct: 146 LEFTADEGSVGLPPHVWNNLFSEGCIMESPLIEVRYVWLPKGTYAKLQPERGGFSDLPNH 205
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFK 185
KA+LET+LR ++ L+ GD V Y ++ + V+E KPS++VS++ETD EVD + P+DF
Sbjct: 206 KAILETSLRQHATLSQGDIFTVNYGKLEHKLRVLELKPSSSVSVLETDIEVDIVDPIDFS 265
Query: 186 E 186
E
Sbjct: 266 E 266
>gi|356554447|ref|XP_003545558.1| PREDICTED: uncharacterized protein LOC100779441 [Glycine max]
Length = 573
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 96/177 (54%), Gaps = 27/177 (15%)
Query: 29 NGDKIVMPPSALDRLA----YLHIEYPMLFELS--------------NTSAGRVTYCGVM 70
GDKI +PPS L+ + + P+ F+LS GR T+ GV+
Sbjct: 90 GGDKIKLPPSCFAELSEQGTFDKRQGPLYFQLSLVHEESTSSIQTTDKVKQGRTTHSGVL 149
Query: 71 EFIADEGLIYLP--YWMMENMLLQEGD----IVEVKNASLAKGSYVKLQPHTKDFLDISN 124
EF ADEG + LP W N L EG +VEV+ L KG+Y KLQP F D+ N
Sbjct: 150 EFTADEGSVGLPPHVW---NNLFSEGTPKPPLVEVRYVWLPKGTYAKLQPEKVGFSDLPN 206
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPP 181
KA+LET LR ++ L+ GD + V Y Y + V+E KPS++VS++ETD EVD + P
Sbjct: 207 HKAILETCLRQHATLSQGDILTVNYGQLAYELRVLELKPSSSVSVLETDIEVDIVDP 263
>gi|384485653|gb|EIE77833.1| hypothetical protein RO3G_02537 [Rhizopus delemar RA 99-880]
Length = 206
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 94/171 (54%), Gaps = 33/171 (19%)
Query: 89 MLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDTIMVP 148
M ++ G+I+EVKN +L GS++K+QP + DFLDIS+ +AVLE LR++S LT D I +
Sbjct: 1 MGVEPGNIIEVKNTTLPLGSFIKIQPQSADFLDISDHRAVLEKALRNFSTLTVNDVIQIN 60
Query: 149 YNNKKYYINVVETKP----STAVSIIETDCEVDFIPPLDFKEPEKPSSSSLSNRTLPEVK 204
YN+K Y I V+E KP + +SI+ETD EVDF PP+ + EP K S + +
Sbjct: 61 YNDKVYEIKVLEAKPFHEDHSGISIVETDLEVDFAPPVGYVEPSKQQKSQVMTSKM---- 116
Query: 205 EEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTGSGRCLNGKS 255
P+D P VK E FS F G G+ L GK+
Sbjct: 117 ---PIDL---------------PKAVKNE-------FSAFQGGGQSLRGKN 142
>gi|67588481|ref|XP_665356.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54656005|gb|EAL35126.1| hypothetical protein Chro.40141, partial [Cryptosporidium hominis]
Length = 137
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 49/94 (52%), Positives = 71/94 (75%)
Query: 10 FERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGV 69
F +Y CYP+SF + LE G+KI++PPSAL++LA +I +PMLF++SN + + T+ GV
Sbjct: 44 FINEYSCYPVSFAGRDELEGGNKILLPPSALNQLARRNITWPMLFQISNPTKNKFTHSGV 103
Query: 70 MEFIADEGLIYLPYWMMENMLLQEGDIVEVKNAS 103
+EF+A+EG Y+PYWMM+N+ LQEGDI + N S
Sbjct: 104 LEFVAEEGTCYMPYWMMQNLELQEGDITSIMNTS 137
>gi|422293758|gb|EKU21058.1| ubiquitin fusion degradation protein 1 [Nannochloropsis gaditana
CCMP526]
Length = 126
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 68/91 (74%)
Query: 9 AFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCG 68
F+ +Y Y F DK HLE DKI +PPSALD LA LHI+YPMLF+++ ++G+ T+CG
Sbjct: 12 VFDEEYNSYSFVFQDKAHLEGSDKIFLPPSALDTLARLHIDYPMLFQITCRASGKRTHCG 71
Query: 69 VMEFIADEGLIYLPYWMMENMLLQEGDIVEV 99
V+EF A EG YLPYWMM+N+LL+EG ++V
Sbjct: 72 VLEFSAAEGSCYLPYWMMQNLLLEEGGFLQV 102
>gi|356501298|ref|XP_003519462.1| PREDICTED: uncharacterized protein LOC100777384 [Glycine max]
Length = 573
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 100/176 (56%), Gaps = 27/176 (15%)
Query: 30 GDKIVMPPSALDRLA----YLHIEYPMLFELS-----NTSA---------GRVTYCGVME 71
GDKI +PPS L+ + + P+ F+LS +TS+ GR T+ GV+E
Sbjct: 91 GDKIKLPPSCFAELSEQGTFDKGQGPLYFQLSLVHEESTSSIQTTDKEKQGRTTHSGVLE 150
Query: 72 FIADEGLIYLP--YWMMENMLLQEGDI----VEVKNASLAKGSYVKLQPHTKDFLDISNP 125
F ADEG + LP W N L EG + VEV+ L KG+Y KLQP F D+ N
Sbjct: 151 FTADEGSVGLPPHVW---NNLFSEGTLKAPLVEVRYVWLPKGTYAKLQPERVGFSDLPNH 207
Query: 126 KAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPP 181
KA+LET LR ++ L+ GD + V Y Y + V+E KPS++VS++ETD EVD + P
Sbjct: 208 KAILETCLRQHATLSQGDILTVNYGELAYKLRVLELKPSSSVSVLETDIEVDIVDP 263
>gi|387594010|gb|EIJ89034.1| hypothetical protein NEQG_00853 [Nematocida parisii ERTm3]
gi|387595788|gb|EIJ93411.1| hypothetical protein NEPG_01753 [Nematocida parisii ERTm1]
Length = 227
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 104/192 (54%), Gaps = 4/192 (2%)
Query: 11 ERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVM 70
E ++ P + + + KI +P L L ++ P +F++S T+ GV
Sbjct: 11 ELQWTLNPKRYTENKAEHHSGKIFLPQICLVTLISKQVDTPYIFKISANDNISYTHVGVQ 70
Query: 71 EFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLE 130
EFI + LP W+ + + L +G VE+ SL KG +++L P +KDFL+I NPKA LE
Sbjct: 71 EFIDEPDEAILPNWLYDQLAL-DGSPVEITYVSLPKGEFIRLLPQSKDFLEIENPKASLE 129
Query: 131 TTLRSYSCLTTGDTI--MVPYNNKKYYINVVETKPST-AVSIIETDCEVDFIPPLDFKEP 187
+LR+Y L+ GDTI + K V E KP ++II+TD EVDF+PP D+ E
Sbjct: 130 DSLRNYQVLSEGDTISLYIESEFKPILFTVAEIKPKGPGINIIDTDLEVDFLPPTDYIED 189
Query: 188 EKPSSSSLSNRT 199
+ SSSL N T
Sbjct: 190 KLDDSSSLMNIT 201
>gi|154346716|ref|XP_001569295.1| putative ubiquitin fusion degradation protein [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134066637|emb|CAM44436.1| putative ubiquitin fusion degradation protein [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 325
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 132/277 (47%), Gaps = 33/277 (11%)
Query: 9 AFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCG 68
++E + S +++ + G ++++P S LD L + + YP+ FE+ S RV Y
Sbjct: 7 SYETRLVAVSASSVNQQRINYGSRVLLPSSVLDDLCRMTMVYPLQFEIITPSKKRV-YAA 65
Query: 69 VMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAV 128
V+EF A G + LP WM +++ L+ +V+V++ SL GS VKL+PH K + NP+ +
Sbjct: 66 VLEFNAQAGSVVLPDWMFQHLGLRGTMVVKVQSCSLPPGSLVKLRPHQKALVMFENPRNL 125
Query: 129 LETTLRSYSCLTTGDTIMVPYNNKKYYINVVET-----KPSTAVSIIETD-----CEVDF 178
LE L Y LT G TI++ Y ++++ +++VE + + + D +VDF
Sbjct: 126 LELRLAQYPVLTKGTTIVISYVDREFQLDLVEIIDMKQQLVNGILTVRADGAPVMLKVDF 185
Query: 179 IPPLD---------FKEPEKPSSSSLSNRTLPEVKEEPPLDFK------GPEKPSSSSLS 223
PLD P+ +++ + P + P +F+ GP+ P+ +
Sbjct: 186 ERPLDMPPSPLETPISAAASPTGANVIGASTPTGVQFQPFNFRPPSLTDGPKVPAGAQPL 245
Query: 224 NRTPPE-------VKEEPPKKIAKFSPFTGSGRCLNG 253
N P + K + FTGSGR + G
Sbjct: 246 NHQPGQSYSSFTGAKGSSSTAEQEHPAFTGSGRTVRG 282
>gi|164605542|dbj|BAF98608.1| CM0545.430.nc [Lotus japonicus]
Length = 570
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 97/172 (56%), Gaps = 24/172 (13%)
Query: 29 NGDKIVMPPS---------ALDR------LAYLHIEYPMLFELSNTSAGRVTYCGVMEFI 73
+GDKI +PPS ALD+ L+ +H+E E ++ T+ GV+EF
Sbjct: 90 SGDKIKLPPSCFTDLSDNGALDKGPMYFQLSLVHVEGTSGIEGADKEKQGTTHSGVLEFT 149
Query: 74 ADEGLIYLP--YWMMENMLLQEGDI----VEVKNASLAKGSYVKLQPHTKDFLDISNPKA 127
ADEG + LP W N L E + VEV+ L KG+Y KLQP F D+ N KA
Sbjct: 150 ADEGSVGLPPHVW---NNLFSEVSVNSPLVEVRYVWLPKGTYAKLQPERAGFSDLPNHKA 206
Query: 128 VLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFI 179
+LET+LR ++ L+ GD + V Y Y + V+E KPST+VS++ETD EVD +
Sbjct: 207 ILETSLRQHATLSQGDILTVNYGELAYKLRVLELKPSTSVSVLETDIEVDIV 258
>gi|385301979|gb|EIF46133.1| ubiquitin fusion degradation protein 1 [Dekkera bruxellensis
AWRI1499]
Length = 256
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 76/111 (68%), Gaps = 3/111 (2%)
Query: 81 LPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLT 140
+P WM++ + Q G +V+++ L GS+VKL+P + DFL+I++PKAVLE LR+++ LT
Sbjct: 1 MPQWMLDTLQCQPGTLVKIQTTDLPLGSFVKLEPQSVDFLEITDPKAVLENALRNFATLT 60
Query: 141 TGDTIMVPYNNKKYYINVVETKP---STAVSIIETDCEVDFIPPLDFKEPE 188
GD I + YNN+ Y I ++E KP S + +IETD E DF PP+ + EP+
Sbjct: 61 VGDIIQLHYNNQIYKIKILEXKPDSESQGICVIETDLETDFAPPVGYVEPD 111
>gi|11139266|gb|AAG31651.1| PRLI-interacting factor K [Arabidopsis thaliana]
Length = 574
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 103/183 (56%), Gaps = 18/183 (9%)
Query: 9 AFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHI--EYPMLFELS---NTSAGR 63
FER ++ +SF NGDKI +PPS L+ + P+ FELS + +
Sbjct: 90 VFERVFQ--AVSFQG-----NGDKIKLPPSCFTELSDQGAFDKGPLYFELSVVDHADNKK 142
Query: 64 VTYCGVMEFIADEGLIYLPYWMMENMLLQEGD-----IVEVKNASLAKGSYVKLQPHTKD 118
T+ GV+EF A++G I LP + N L D +VE++ L KGSY KLQP
Sbjct: 143 TTHSGVLEFTAEDGTIGLPPHVWSN-LFSTHDPMDVPLVEIRYIRLPKGSYAKLQPDNLG 201
Query: 119 FLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDF 178
F D+ N KA+LET LR ++ L+ D ++V Y Y + V+E +P+T++S++ETD EVD
Sbjct: 202 FSDLPNHKAILETILRQHATLSLDDVLLVNYGQVSYKLQVLELRPATSISVLETDIEVDI 261
Query: 179 IPP 181
+ P
Sbjct: 262 VSP 264
>gi|18414447|ref|NP_567465.1| ubiquitin fusion degradation UFD1 family protein [Arabidopsis
thaliana]
gi|17933289|gb|AAL48228.1|AF446353_1 AT4g15420/dl3755w [Arabidopsis thaliana]
gi|21554166|gb|AAM63245.1| UFD1 like protein [Arabidopsis thaliana]
gi|23506013|gb|AAN28866.1| At4g15420/dl3755w [Arabidopsis thaliana]
gi|111609946|gb|ABH11523.1| UFD1d [Arabidopsis thaliana]
gi|332658201|gb|AEE83601.1| ubiquitin fusion degradation UFD1 family protein [Arabidopsis
thaliana]
Length = 561
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 103/183 (56%), Gaps = 18/183 (9%)
Query: 9 AFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHI--EYPMLFELS---NTSAGR 63
FER ++ +SF NGDKI +PPS L+ + P+ FELS + +
Sbjct: 77 VFERVFQ--AVSFQG-----NGDKIKLPPSCFTELSDQGAFDKGPLYFELSVVDHADNKK 129
Query: 64 VTYCGVMEFIADEGLIYLPYWMMENMLLQEGD-----IVEVKNASLAKGSYVKLQPHTKD 118
T+ GV+EF A++G I LP + N L D +VE++ L KGSY KLQP
Sbjct: 130 TTHSGVLEFTAEDGTIGLPPHVWSN-LFSTHDPMDVPLVEIRYIRLPKGSYAKLQPDNLG 188
Query: 119 FLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDF 178
F D+ N KA+LET LR ++ L+ D ++V Y Y + V+E +P+T++S++ETD EVD
Sbjct: 189 FSDLPNHKAILETILRQHATLSLDDVLLVNYGQVSYKLQVLELRPATSISVLETDIEVDI 248
Query: 179 IPP 181
+ P
Sbjct: 249 VSP 251
>gi|378756072|gb|EHY66097.1| hypothetical protein NERG_00793 [Nematocida sp. 1 ERTm2]
Length = 227
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 94/169 (55%), Gaps = 4/169 (2%)
Query: 32 KIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLL 91
KI +P L L ++ P +F++S T+ GV EFI + LP W+ E + L
Sbjct: 32 KIFLPQLCLITLVSKQVDTPYIFKISANGDISYTHVGVQEFIDEPDEAILPNWLYEQLAL 91
Query: 92 QEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDTI--MVPY 149
+G VE+ SL KG+++KL P +KDFL+I NPK LE +LR+Y L+ GDTI +
Sbjct: 92 -DGSPVEISYVSLPKGTFIKLLPQSKDFLEIENPKIALENSLRNYQVLSKGDTISLYIES 150
Query: 150 NNKKYYINVVETKPST-AVSIIETDCEVDFIPPLDFKEPEKPSSSSLSN 197
K V E +P + II+TD EVDF+PP D+ E +S+L +
Sbjct: 151 EFKHILFTVAEIQPEGPGIIIIDTDLEVDFLPPADYVENTAEDASALVH 199
>gi|2244899|emb|CAB10321.1| UFD1 like protein [Arabidopsis thaliana]
gi|7268289|emb|CAB78584.1| UFD1 like protein [Arabidopsis thaliana]
Length = 778
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 103/183 (56%), Gaps = 18/183 (9%)
Query: 9 AFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHI--EYPMLFELS---NTSAGR 63
FER ++ +SF NGDKI +PPS L+ + P+ FELS + +
Sbjct: 294 VFERVFQ--AVSFQG-----NGDKIKLPPSCFTELSDQGAFDKGPLYFELSVVDHADNKK 346
Query: 64 VTYCGVMEFIADEGLIYLPYWMMENMLLQEGD-----IVEVKNASLAKGSYVKLQPHTKD 118
T+ GV+EF A++G I LP + N L D +VE++ L KGSY KLQP
Sbjct: 347 TTHSGVLEFTAEDGTIGLPPHVWSN-LFSTHDPMDVPLVEIRYIRLPKGSYAKLQPDNLG 405
Query: 119 FLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDF 178
F D+ N KA+LET LR ++ L+ D ++V Y Y + V+E +P+T++S++ETD EVD
Sbjct: 406 FSDLPNHKAILETILRQHATLSLDDVLLVNYGQVSYKLQVLELRPATSISVLETDIEVDI 465
Query: 179 IPP 181
+ P
Sbjct: 466 VSP 468
>gi|326519140|dbj|BAJ96569.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 569
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 96/170 (56%), Gaps = 20/170 (11%)
Query: 30 GDKIVMPPSALDRLAYLHI--EYPMLFELSNT-----------SAGRVTYCGVMEFIADE 76
GDKI +PPS+ L+ + PM F LSN A T CGV+EF A E
Sbjct: 91 GDKIKLPPSSFKDLSDQGALDKGPMYFRLSNVRDRVPGASPDQDAEEETCCGVLEFTARE 150
Query: 77 GLIYLPYWMMENMLLQEGDI-----VEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLET 131
G LP + N+ + DI ++VK ASL KG+Y KL+P F D+ N +AVLET
Sbjct: 151 GSAQLPPHVWNNLF--QSDIPDVPLIQVKYASLPKGTYAKLKPEGVGFSDLPNHRAVLET 208
Query: 132 TLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPP 181
LR+++ L+ D +MV Y +Y + V+E KP+++VS++ETD EVD P
Sbjct: 209 ALRNHATLSENDVVMVNYGQLQYKLKVLELKPASSVSVLETDVEVDIEGP 258
>gi|240276921|gb|EER40431.1| ubiquitin fusion degradation protein Ufd1 [Ajellomyces capsulatus
H143]
Length = 322
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 76/114 (66%), Gaps = 3/114 (2%)
Query: 79 IYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSC 138
Y Y +M+ +LL+ GD++++K+ L G Y+KLQ + FLDIS+PKAVLE R++SC
Sbjct: 23 FYRCYPIMQTLLLEPGDLLQIKSTDLPPGQYIKLQAQSTSFLDISDPKAVLENAFRNFSC 82
Query: 139 LTTGDTIMVPYNNKKYYINVVETKPS---TAVSIIETDCEVDFIPPLDFKEPEK 189
L+ D YN+ Y + V+ETKP A+S++ETD EVDF P+ ++EP++
Sbjct: 83 LSKDDIFTFSYNDHIYEMAVLETKPQHSKNAISVLETDLEVDFATPVGYEEPKR 136
>gi|300709039|ref|XP_002996688.1| hypothetical protein NCER_100186 [Nosema ceranae BRL01]
gi|239606008|gb|EEQ83017.1| hypothetical protein NCER_100186 [Nosema ceranae BRL01]
Length = 229
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 3/176 (1%)
Query: 14 YRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFI 73
++ P+ + ++ G K+ +P S L+ L L I+ P F++S T T+CGV+EF
Sbjct: 15 WQLKPLKYAEENENNYGGKVFLPQSVLEDLVVLQIQPPYTFQISRTDTKEFTHCGVLEFT 74
Query: 74 ADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTL 133
A+EG I +P WM + L+ V++ ++ G+Y+KL PHT FL++ NPK LE L
Sbjct: 75 AEEGTIVVPLWMYNQLDLKSAKEVKLAYKTIEMGTYLKLLPHTPKFLEVENPKQELENVL 134
Query: 134 RSYSCLTTGDTIMVPYNN---KKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
R Y L+ D I ++ K+ + ++ + ++TD VDF P+ +KE
Sbjct: 135 RFYPTLSLNDEIECVFSEIGLIKFTVTEIDPSDDGVIYTVDTDLSVDFCEPIGYKE 190
>gi|212275943|ref|NP_001130331.1| uncharacterized protein LOC100191426 [Zea mays]
gi|194688866|gb|ACF78517.1| unknown [Zea mays]
gi|413948217|gb|AFW80866.1| hypothetical protein ZEAMMB73_365866 [Zea mays]
Length = 567
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 95/166 (57%), Gaps = 17/166 (10%)
Query: 30 GDKIVMPPSALDRLAYLHI--EYPMLFELSNT-----------SAGRVTYCGVMEFIADE 76
GDKI +PPS+ L+ + PM F LS AG T CGV+EF A E
Sbjct: 91 GDKIKLPPSSFKELSDEGALDKGPMYFRLSKVRDTVPGAAMEQDAG-TTCCGVLEFTARE 149
Query: 77 GLIYLPYWMMENMLLQ---EGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTL 133
G LP + N+ E ++EVK SL KG+Y KL+P F D+ N +AVLET L
Sbjct: 150 GSAELPLHVWNNLFGSDTPEVPLIEVKYTSLLKGTYAKLKPEGGGFSDLPNHRAVLETAL 209
Query: 134 RSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFI 179
R+++ L+ DT++V Y +Y + V+E KP+++VS++ETD EVD +
Sbjct: 210 RNHATLSENDTVVVNYGQLQYKLKVLELKPASSVSVLETDVEVDIV 255
>gi|253741483|gb|EES98352.1| Ubiquitin fusion degradation protein 1 [Giardia intestinalis ATCC
50581]
Length = 313
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 107/195 (54%), Gaps = 5/195 (2%)
Query: 27 LENGDKIVMPPSALDRLAYLHI---EYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPY 83
ENG K+++ L RL +I M F + + + V +CGV++F L+Y P
Sbjct: 39 FENGGKLILGHDILQRLLDKNIIEEGKGMHFRIHSPAHKIVIHCGVLDFSGANTLLYAPS 98
Query: 84 WMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGD 143
W+ME ++ GD V + + +L G+++K+QP + FL+I +P+AVL L ++SC+ G
Sbjct: 99 WIMEYCNIRPGDSVVIASINLEPGTFMKIQPQSTKFLEIDDPEAVLTNLLPNFSCIMRGQ 158
Query: 144 TIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE-PEKPSSSSLSNRTLPE 202
+ + N KY I +++TKP AVS++ T+ V+F P+ + E E+ L + L E
Sbjct: 159 YLRFEHANIKYDIKILDTKPDVAVSLLNTNITVEFAEPVGYTEYLEEQKKKYLEKKRLEE 218
Query: 203 VKE-EPPLDFKGPEK 216
K+ + + F G +
Sbjct: 219 AKKADEAMGFIGGRR 233
>gi|255576913|ref|XP_002529342.1| ubiquitin fusion degradaton protein, putative [Ricinus communis]
gi|223531213|gb|EEF33059.1| ubiquitin fusion degradaton protein, putative [Ricinus communis]
Length = 570
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 120/237 (50%), Gaps = 19/237 (8%)
Query: 29 NGDKIVMPPSALDRLAYLHI--EYPMLFELS------------NTSAGRVTYCGVMEFIA 74
NGDKI +P S L+ + P+ F+LS S ++T+ GV+EF A
Sbjct: 90 NGDKIKLPSSCFTELSDQGAFDKGPIYFQLSVIHQEGSSEMKTTDSEQKITHSGVLEFTA 149
Query: 75 DEGLIYLPYWMMENMLLQ---EGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLET 131
+EG + LP + N+ E +VE++ L KG+Y KLQP F D+ N KA+LET
Sbjct: 150 EEGSVGLPPHVWNNLFPSGPLEVPLVEIRYRWLPKGTYAKLQPEVVGFSDLPNHKAILET 209
Query: 132 TLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEKPS 191
TLR ++ L+ GD I V + Y + V+E KPS++VS++ETD EVD + P E +
Sbjct: 210 TLRQHATLSQGDVITVNHGILTYKLRVLELKPSSSVSVLETDIEVDIVGPDSTSVSETAN 269
Query: 192 SSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTGSG 248
L T+ + E + +G + S+ N T ++ + + K TGSG
Sbjct: 270 QHVLKPLTVGTL--ESGMVEEGNYEYYKFSIDNETWEKIASDDIRVEVKIDAETGSG 324
>gi|225447095|ref|XP_002273297.1| PREDICTED: uncharacterized protein LOC100246609 [Vitis vinifera]
Length = 569
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 97/171 (56%), Gaps = 18/171 (10%)
Query: 29 NGDKIVMPPS---------ALDR------LAYLHIEYPMLFELSNTSAGRVTYCGVMEFI 73
NGDKI +PPS A D+ L+ +H E + + + T R T+ GV+EF
Sbjct: 90 NGDKIKLPPSCFKELSDQGAFDKGPLYFGLSVVHQEGSLDTKAAETQNQRTTHAGVLEFT 149
Query: 74 ADEGLIYLPYWMMENMLLQE---GDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLE 130
A+EG + LP + N+ +E +VEV+ L KG+Y KLQ F DI N KAVLE
Sbjct: 150 AEEGSVSLPPHVWSNLFPEETLKSPLVEVRYLWLPKGTYAKLQADGIGFSDIPNHKAVLE 209
Query: 131 TTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPP 181
T LR ++ L+ D ++V + Y + V+E KPS+++S++ETD EVD + P
Sbjct: 210 TRLRQHATLSQDDVLIVNHGELTYKLKVLELKPSSSISVLETDIEVDIVGP 260
>gi|269859738|ref|XP_002649593.1| ubiquitin fusion degradation protein 1 [Enterocytozoon bieneusi
H348]
gi|220066956|gb|EED44425.1| ubiquitin fusion degradation protein 1 [Enterocytozoon bieneusi
H348]
Length = 229
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 109/201 (54%), Gaps = 5/201 (2%)
Query: 10 FERKYRCYPISFI-DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCG 68
F +++ PI + D P+ KI +P S L+ L ++ P +FE+S+ + T C
Sbjct: 11 FSQEWCLKPIKYFKDSPN-NFSSKISLPMSILNDLTIQNLPLPYIFEISHENGILKTKCT 69
Query: 69 VMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAV 128
V F EG + LP WM E++ LQ V++ L G VKL PH+ DFL I NP+
Sbjct: 70 VGNFTDYEGQVMLPAWMWEHLDLQTSSFVQISYIRLPLGKKVKLLPHSTDFLKIDNPRVE 129
Query: 129 LETTLRSYSCLTTGDTIMVPYNNKKYYI-NVVETKPS--TAVSIIETDCEVDFIPPLDFK 185
LET LR+Y LT GD I + + + K I +V+E PS ++ I++TD V+F PL ++
Sbjct: 130 LETALRNYGVLTIGDEIRLNFIHFKNMIFSVIEVDPSYDNSIYIVDTDLNVEFEEPLGYQ 189
Query: 186 EPEKPSSSSLSNRTLPEVKEE 206
E K + + L + + E E+
Sbjct: 190 EELKENRTVLKHCNIGESNEK 210
>gi|440795041|gb|ELR16182.1| ubiquitin domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 647
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 37/215 (17%)
Query: 13 KYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFEL--------SNTSAGRV 64
+ +C+ + P L+ GDK+V+P + L+ + + +P F + ++ A +
Sbjct: 179 RLQCFSSAVGGNPRLDRGDKVVLPAAVLEEAVHKGLPFPYTFRVRKVDAESPADADASPI 238
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDI-- 122
+CG ++F A G+ YLP +M + LQEGD V +K+ L KG Y +LQP + ++DI
Sbjct: 239 AHCGALDFEAPAGMCYLPASIMAKLALQEGDHVSLKSVRLPKGEYAQLQPQSASWIDIPM 298
Query: 123 SNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVET--------------------- 161
+ +A+L LR+Y LT GDT+ + + ++ + +V +
Sbjct: 299 ATREAILADQLRNYQTLTVGDTVRLSHGSQDHRFHVTKVLPAPSHEMRDDSADAQLAVPA 358
Query: 162 ------KPSTAVSIIETDCEVDFIPPLDFKEPEKP 190
PS +SII+ D VD I P + P P
Sbjct: 359 PDSLIGGPSAGISIIDADVAVDVIEPREAYSPIAP 393
>gi|308158504|gb|EFO61153.1| Ubiquitin fusion degradation protein 1 [Giardia lamblia P15]
Length = 313
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 113/212 (53%), Gaps = 10/212 (4%)
Query: 27 LENGDKIVMPPSALDRLAYLHI---EYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPY 83
ENG KI++ L RL +I M F + + + V +CGV++F L+Y P
Sbjct: 39 FENGGKIILGHDILQRLLDKNIIEEGKGMHFRIHSPAHKIVIHCGVLDFSGANTLLYAPS 98
Query: 84 WMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGD 143
W+ME ++ GD V + + +L G+++K+QP + FL+I +P+AVL L ++SC+ G
Sbjct: 99 WIMEYCNIRPGDSVVIASINLEPGTFMKIQPQSTKFLEIDDPEAVLTNLLPNFSCIMRGQ 158
Query: 144 TIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE-PEKPSSSSLSNRTLPE 202
+ + KY I +++TKP AVS++ T+ V+F P+ + E E+ + + L E
Sbjct: 159 YLRFEHAGVKYDIKILDTKPDVAVSLLNTNITVEFAEPVGYTEYLEEQKKKYMEKKRLEE 218
Query: 203 VKE-EPPLDFKGPEK-----PSSSSLSNRTPP 228
K+ + + F G + + +SL+ T P
Sbjct: 219 AKKADEAMGFVGGRRLDGRGKAIASLTEATQP 250
>gi|242053211|ref|XP_002455751.1| hypothetical protein SORBIDRAFT_03g023980 [Sorghum bicolor]
gi|241927726|gb|EES00871.1| hypothetical protein SORBIDRAFT_03g023980 [Sorghum bicolor]
Length = 567
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 92/164 (56%), Gaps = 15/164 (9%)
Query: 30 GDKIVMPPSALDRLAYLHI--EYPMLFELSNT----------SAGRVTYCGVMEFIADEG 77
GDKI +PPS+ L+ + PM F LS T CGV+EF A EG
Sbjct: 91 GDKIKLPPSSFKELSDEGALDKGPMYFRLSKVRDTVPGTSMEQDAEATCCGVLEFTAREG 150
Query: 78 LIYLPYWMMENMLLQ---EGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLR 134
LP + N+ E ++EVK SL KG+Y KL+P F D+ N +AVLET LR
Sbjct: 151 SAELPLHVWNNLFRSDTPEVPLIEVKYISLPKGTYAKLKPEGAGFSDLPNHRAVLETALR 210
Query: 135 SYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDF 178
+++ L+ DT++V Y +Y + V+E KP+++VS++ETD EVD
Sbjct: 211 NHATLSENDTVVVNYGQLEYKLKVLELKPASSVSVLETDVEVDI 254
>gi|159112567|ref|XP_001706512.1| Ubiquitin fusion degradation protein 1 [Giardia lamblia ATCC 50803]
gi|157434609|gb|EDO78838.1| Ubiquitin fusion degradation protein 1 [Giardia lamblia ATCC 50803]
Length = 313
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 113/212 (53%), Gaps = 10/212 (4%)
Query: 27 LENGDKIVMPPSALDRLAYLHI---EYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPY 83
ENG KI++ L RL +I M F + + + V +CGV++F L+Y P
Sbjct: 39 FENGGKIILGHDILQRLLDKNIIEEGKGMHFRIHSPAHKIVIHCGVLDFSGANTLLYAPS 98
Query: 84 WMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGD 143
W+ME ++ GD V + + +L G+++K+QP + FL+I +P+AVL L ++SC+ G
Sbjct: 99 WIMEYCNIRPGDSVVIASINLEPGTFMKIQPQSTKFLEIDDPEAVLTNLLPNFSCIMRGQ 158
Query: 144 TIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE-PEKPSSSSLSNRTLPE 202
+ + KY I +++TKP AVS++ T+ V+F P+ + E E+ + + L E
Sbjct: 159 YLRFEHAGIKYDIKILDTKPDVAVSLLNTNITVEFAEPVGYTEYLEEQKRKYMEKKRLEE 218
Query: 203 VKE-EPPLDFKGPEK-----PSSSSLSNRTPP 228
K+ + + F G + + +SL+ T P
Sbjct: 219 SKKADEAMGFVGGRRLDGRGKAIASLTEATQP 250
>gi|401421036|ref|XP_003875007.1| putative ubiquitin fusion degradation protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322491243|emb|CBZ26509.1| putative ubiquitin fusion degradation protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 325
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 127/276 (46%), Gaps = 33/276 (11%)
Query: 10 FERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGV 69
+E + S +++ + G ++++P S LD L + + YP+ FE+ RV Y V
Sbjct: 8 YETRLVAVSASSVNQQRINYGSRVLLPSSVLDDLCRITMVYPLQFEIITPGKKRV-YAAV 66
Query: 70 MEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVL 129
+EF A G + LP WM +++ L +V+V++ SL GS VKL+PH K + NP+ +L
Sbjct: 67 LEFNAQAGSVVLPDWMFQHLGLCGTMVVKVQSCSLPPGSLVKLRPHQKALVMFENPRHLL 126
Query: 130 ETTLRSYSCLTTGDTIMVPYNNKKY---YINVVETKPSTAVSIIE-------TDCEVDFI 179
E L Y LT G TI++ Y ++++ +++++ K I+ + +VDF
Sbjct: 127 ELRLAQYPVLTKGTTIVISYVDREFQLDLVDIIDMKQEFVNGILTVRADGAPVELKVDFE 186
Query: 180 PPLDF--KEPEKPSSSSLS-------NRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEV 230
PLD PE P S+ S + P + P +F+ P ++ PP
Sbjct: 187 RPLDMPPSPPETPISAVASPTGVNVIGASSPTGVQFQPFNFRPPSLTGVPKVAAVAPPLQ 246
Query: 231 KEEPPKKIAKFSP-------------FTGSGRCLNG 253
+ + P FTG+GR L G
Sbjct: 247 HQPGQSSSSSSGPKGGNSAAKPEQPTFTGAGRTLRG 282
>gi|440803128|gb|ELR24040.1| ubiquitin fusion degradation protein ufd1 protein [Acanthamoeba
castellanii str. Neff]
Length = 392
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 143/283 (50%), Gaps = 15/283 (5%)
Query: 14 YRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEY-PMLFELSNTSAGRVT-YCGVME 71
Y +P SF ++P +E G+KI++ L RL L E P+LF++++ S+ +T + GV +
Sbjct: 15 YAAHPPSFANRPDIEYGNKIILGSEVLGRLGGLVEEASPLLFQVASFSSPMLTAFAGVAD 74
Query: 72 FIA-DEGLIYLPYWMMENMLLQEGDIVEVKNAS--LAKGSYVKLQPHTKDFLDISNPKAV 128
F A ++ LP WMM+++ L++GD V + A+ L +G++V+L+P + + NPKAV
Sbjct: 75 FTAPHSSVVVLPRWMMDSLELKDGDEVRINLAAPPLPQGTFVRLRPSDGAWGALENPKAV 134
Query: 129 LETTLRSYSC-LTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIP-PLDFKE 186
LE L + C LT G + + + + + ++V E +P+ ++ I+E EVD +P P +E
Sbjct: 135 LEEHLSYHYCSLTQGTDVWIRWQDVVHRLHVEECQPAESIQIVEVRLEVDLLPAPHSGRE 194
Query: 187 PEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKF---SP 243
++ L + V+ F+ S + R E E P A P
Sbjct: 195 ADRVCDLQLDSPHEATVEANHYTHFRFAPPDSLDRMDLRVVVEGIEGDPDVYASLVSKQP 254
Query: 244 FTGSGRCLNGKS-STQPTVSPSSPLIDNPQQNAAN-GINGSKS 284
+ + S Q T+ PSS DN ++ G+NG K+
Sbjct: 255 TLADHEWMAADTGSVQLTIPPSS---DNGRRGVVYVGVNGYKA 294
>gi|219127600|ref|XP_002184020.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404743|gb|EEC44689.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 320
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 104/211 (49%), Gaps = 38/211 (18%)
Query: 11 ERKYRCYPIS-FIDKP-------HLENGDKIVMPPSALDRLAYLHIEYPMLF---ELSNT 59
R+ C P+S D P H++ GDK+ +P + + H E P LF +
Sbjct: 93 HRRLICLPLSDRFDPPMGSFSHKHVQTGDKMSLPANFWQAIQLNHAEVPWLFSVKRIDGV 152
Query: 60 SAGRVTYC-------------------GVMEFIADEGLIYLPYWMMENMLLQEGDIVEVK 100
+ RV + G ++F A I+LP+WMM + ++ DIVEV+
Sbjct: 153 TGERVEFSDDDIITPHKPLAQLDKVVGGPLDFRAPACYIFLPWWMMRALGVKPRDIVEVE 212
Query: 101 -NASLAKGSYVKLQPHTKDF-LDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINV 158
++ GS KL+PH+ DF +I+NP+AVLET LR YS LT G TI YN K+Y+ +V
Sbjct: 213 LFETVPAGSLAKLRPHSSDFGKEIANPQAVLETELRHYSSLTQGSTIAFDYNKKRYWFDV 272
Query: 159 VETK------PSTAVSIIETDCEVDFIPPLD 183
VE + S+ V + + D DF+ D
Sbjct: 273 VELRSAPRGEKSSMVKVQDCDIATDFLIARD 303
>gi|146102600|ref|XP_001469375.1| putative ubiquitin fusion degradation protein [Leishmania infantum
JPCM5]
gi|398025256|ref|XP_003865789.1| ubiquitin fusion degradation protein, putative [Leishmania
donovani]
gi|134073745|emb|CAM72482.1| putative ubiquitin fusion degradation protein [Leishmania infantum
JPCM5]
gi|322504026|emb|CBZ39113.1| ubiquitin fusion degradation protein, putative [Leishmania
donovani]
Length = 325
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 118/238 (49%), Gaps = 20/238 (8%)
Query: 10 FERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGV 69
+E + S + + + G ++++P S LD L + + YP+ FE+ + RV Y V
Sbjct: 8 YETRLVAVSASSVHQQRINYGSRVLLPSSVLDDLCRITMVYPLQFEIITPAKKRV-YAAV 66
Query: 70 MEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVL 129
+EF A G + LP WM +++ L +V+V++ SL GS VKL+PH K + NP+ +L
Sbjct: 67 LEFNAQAGSVVLPDWMFQHLGLCGTMVVKVQSCSLPPGSLVKLRPHQKALVMFENPRHLL 126
Query: 130 ETTLRSYSCLTTGDTIMVPYNNKKY---YINVVETKPSTAVSIIE-------TDCEVDFI 179
E L Y LT G TI++ Y ++++ +++++ K I+ + +VDF
Sbjct: 127 ELRLAQYPVLTKGTTIVISYVDREFQLDLVDIIDMKQERVNGILTVRADGAPVELKVDFE 186
Query: 180 PPLDFKEP---------EKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPP 228
PLD P+ +++ + P + P +F+ P ++ ++ TPP
Sbjct: 187 RPLDMPPSPPETPTSAVASPTGANVIGASSPTGVQFQPFNFRPPSLTDATKVAAGTPP 244
>gi|349802377|gb|AEQ16661.1| putative ubiquitin fusion degradation protein 1 [Pipa carvalhoi]
Length = 188
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 82/161 (50%), Gaps = 30/161 (18%)
Query: 107 GSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTA 166
+Y K QP DFLDI+NPKAVL LR+++CLTTGD I + YN K Y + V+ETKP A
Sbjct: 2 ATYSKFQPQCPDFLDITNPKAVLGNALRNFACLTTGDVIAINYNEKIYELRVMETKPDKA 61
Query: 167 VSIIETDCEVDFIPPLDFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRT 226
VSIIE D VDF PL +KEPE+ S T P+ E ++ L
Sbjct: 62 VSIIECDMNVDFDAPLGYKEPERYSHQKEPTETEPDHSE------------YAADLG--- 106
Query: 227 PPEVKEEPPKKIAKFSPFTGSGRCLNG-KSSTQPTVSPSSP 266
F F+GSG L+G K P+ SP P
Sbjct: 107 --------------FRAFSGSGNRLDGKKKGIDPSPSPLKP 133
>gi|157877892|ref|XP_001687240.1| putative ubiquitin fusion degradation protein [Leishmania major
strain Friedlin]
gi|68130315|emb|CAJ09627.1| putative ubiquitin fusion degradation protein [Leishmania major
strain Friedlin]
Length = 325
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 105/199 (52%), Gaps = 13/199 (6%)
Query: 10 FERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGV 69
+E + S I++ + G ++++P S LD L + + YP+ FE+ + RV Y V
Sbjct: 8 YETRLVAVSASSINQQRINYGSRVLLPSSVLDDLCRITMVYPLQFEIITPAKKRV-YAAV 66
Query: 70 MEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVL 129
+EF A G + LP WM +++ L +V+V++ SL GS VKL+PH K + NP+ +L
Sbjct: 67 LEFNAQAGSVVLPDWMFQHLGLCGTMVVKVQSCSLPPGSLVKLRPHQKALVMFENPRHLL 126
Query: 130 ETTLRSYSCLTTGDTIMVPYNNKKY---YINVVETKPSTAVSIIE-------TDCEVDFI 179
E L Y LT G TI++ Y ++++ +++++ K I+ + +VDF
Sbjct: 127 ELRLAQYPVLTKGTTIVISYVDREFQLDLVDIIDMKQEFVNGILTVRADGAPVELKVDFE 186
Query: 180 PPLDF--KEPEKPSSSSLS 196
PLD PE P S+ S
Sbjct: 187 RPLDMPPSPPETPISAVAS 205
>gi|340368334|ref|XP_003382707.1| PREDICTED: hypothetical protein LOC100636770 [Amphimedon
queenslandica]
Length = 781
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 97/193 (50%), Gaps = 3/193 (1%)
Query: 13 KYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEF 72
K YP S I + +++GDK+++ P L + YPM F L N + ++ + GV+EF
Sbjct: 304 KILVYPASMISRSDIDSGDKMILSPDILMACEQKELSYPMAFCLENKAQNKMVHAGVLEF 363
Query: 73 IA-DEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK--AVL 129
+LP WM +++ + E V+ L KG++V+LQP + +L + K A+L
Sbjct: 364 SNPTPNTAFLPQWMFDHLSVGEDHEVDFGYVDLPKGTFVQLQPVSSAWLAVPYDKRVAIL 423
Query: 130 ETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEK 189
E LR++ LT G + + Y K+ ++ KP+ +SI++ D + DF+ P D+
Sbjct: 424 EFQLRNFQTLTEGTKVTITYELNKHTFKILRCKPAKGISIVDADVKTDFVEPADYNRFHS 483
Query: 190 PSSSSLSNRTLPE 202
N L E
Sbjct: 484 VEEGQAENIMLDE 496
>gi|357135127|ref|XP_003569163.1| PREDICTED: uncharacterized protein LOC100845492 [Brachypodium
distachyon]
Length = 569
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 96/171 (56%), Gaps = 22/171 (12%)
Query: 30 GDKIVMPPSALDRLAYLHI--EYPMLFELSNTSAGRV------------TYCGVMEFIAD 75
GDKI +PPS+ L+ + PM F LS RV T CGV+EF A
Sbjct: 91 GDKIKLPPSSFKELSDEGALDKGPMYFRLSKVR-DRVPGASQYQGPEEATCCGVLEFTAR 149
Query: 76 EGLIYLPYWMMENMLLQEGDI-----VEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLE 130
EG LP + N+ + DI +EV+ ASL KG+Y KL+P F D+ N +AVLE
Sbjct: 150 EGSAELPPHVWNNLF--QSDIPDVPLIEVRYASLPKGTYAKLKPEGVGFSDLPNHRAVLE 207
Query: 131 TTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPP 181
T LR+++ L+ D ++V Y +Y + V+E KP+++VS++ETD EVD P
Sbjct: 208 TALRNHATLSENDVVVVNYGQLQYKLRVLELKPASSVSVLETDVEVDIEGP 258
>gi|154303562|ref|XP_001552188.1| hypothetical protein BC1G_09352 [Botryotinia fuckeliana B05.10]
Length = 285
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 68/106 (64%), Gaps = 3/106 (2%)
Query: 85 MMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDT 144
MM+ + L+ GD+ ++K+ L S +KLQP + +FLDISNPKAVLE R +S +T GD
Sbjct: 1 MMQTLGLETGDLFQIKSTDLPPASLIKLQPQSVNFLDISNPKAVLEKAFRDFSTVTKGDI 60
Query: 145 IMVPYNNKKYYINVVETKPST---AVSIIETDCEVDFIPPLDFKEP 187
YN+ Y I V+E KP T VS++ETD EVDF PL + EP
Sbjct: 61 FSFHYNDTIYDIAVLEVKPVTDKMGVSMLETDVEVDFAAPLGYVEP 106
>gi|298707664|emb|CBJ25981.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 347
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 87/190 (45%), Gaps = 32/190 (16%)
Query: 26 HLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTS--------------------AGRV- 64
HL+ GDKI MP S L L E P FEL GR
Sbjct: 104 HLQEGDKISMPASILSELMRKQAEIPWQFELKLVRRKGPGKFEPVDVPAPPRAALTGRAE 163
Query: 65 ------TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKD 118
C +++ + E +++P WMM+ + L+ DIV ++ L K S + LQPH+
Sbjct: 164 MPQLSAVACSILDARSPEQFVFMPDWMMKALRLRPRDIVLYRHKDLTKASKIVLQPHSSA 223
Query: 119 FLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVET-----KPSTAVSIIETD 173
FL +SN +AV+ET LR YS +T G T+ Y Y NV+E K AV + ++D
Sbjct: 224 FLKMSNHQAVMETELRHYSAITRGTTVAFRYRKTLYKFNVLECIDADGKSQEAVCVQDSD 283
Query: 174 CEVDFIPPLD 183
DF LD
Sbjct: 284 VATDFQAALD 293
>gi|125570699|gb|EAZ12214.1| hypothetical protein OsJ_02100 [Oryza sativa Japonica Group]
Length = 569
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 94/170 (55%), Gaps = 20/170 (11%)
Query: 30 GDKIVMPPSALDRLAYLHI--EYPMLFELS-----------NTSAGRVTYCGVMEFIADE 76
GDKI +PPS+ L+ + PM F LS + A T CGV+EF A E
Sbjct: 91 GDKIKLPPSSFKELSDEGALDKGPMYFRLSKVRDSVPGAPQDNDADEATCCGVLEFTARE 150
Query: 77 GLIYLPYWMMENMLLQEGD-----IVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLET 131
G L + N+ GD ++EV+ SL KG+Y KL+P F D+ N +AVLET
Sbjct: 151 GSAELTPHVWNNLF--RGDSPDVPLIEVRYVSLPKGTYAKLKPEGVGFSDLPNHRAVLET 208
Query: 132 TLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPP 181
LR+++ L+ D ++V Y +Y + V+E KP+++VS++ETD EVD P
Sbjct: 209 ALRNHATLSENDFVVVNYGQLQYKLKVLELKPASSVSVLETDVEVDIEGP 258
>gi|115437276|ref|NP_001043255.1| Os01g0534800 [Oryza sativa Japonica Group]
gi|57899277|dbj|BAD87678.1| putative PRLI-interacting factor K [Oryza sativa Japonica Group]
gi|113532786|dbj|BAF05169.1| Os01g0534800 [Oryza sativa Japonica Group]
Length = 569
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 94/170 (55%), Gaps = 20/170 (11%)
Query: 30 GDKIVMPPSALDRLAYLHI--EYPMLFELS-----------NTSAGRVTYCGVMEFIADE 76
GDKI +PPS+ L+ + PM F LS + A T CGV+EF A E
Sbjct: 91 GDKIKLPPSSFKELSDEGALDKGPMYFRLSKVRDSVPGAPQDNDADEATCCGVLEFTARE 150
Query: 77 GLIYLPYWMMENMLLQEGD-----IVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLET 131
G L + N+ GD ++EV+ SL KG+Y KL+P F D+ N +AVLET
Sbjct: 151 GSAELTPHVWNNLF--RGDSPDVPLIEVRYVSLPKGTYAKLKPEGVGFSDLPNHRAVLET 208
Query: 132 TLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPP 181
LR+++ L+ D ++V Y +Y + V+E KP+++VS++ETD EVD P
Sbjct: 209 ALRNHATLSENDFVVVNYGQLQYKLKVLELKPASSVSVLETDVEVDIEGP 258
>gi|224131638|ref|XP_002321140.1| predicted protein [Populus trichocarpa]
gi|222861913|gb|EEE99455.1| predicted protein [Populus trichocarpa]
Length = 567
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 100/181 (55%), Gaps = 21/181 (11%)
Query: 29 NGDKIVMPPSAL----DRLAYLHIEYPMLFELS------------NTSAGRVTYCGVMEF 72
+GDKI +PPS D+ A+ + P+ F+LS S T+ GV+EF
Sbjct: 90 SGDKIKLPPSCFTGLSDQGAF--DKGPLYFQLSVVHQEGSSEMIDTDSKQSTTHSGVLEF 147
Query: 73 IADEGLIYLPYWMMENMLLQE---GDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVL 129
A+EG + LP + N+ + ++EV+ L KG+Y KLQP F D+ N KAVL
Sbjct: 148 TAEEGSVGLPPHVWSNLFPIDSPKAPLIEVQYVWLPKGTYAKLQPDVVGFSDLPNHKAVL 207
Query: 130 ETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEK 189
ET+LR ++ L+ GD I V + Y + V+E +PS++VS++ETD EVD + P E +
Sbjct: 208 ETSLRQHATLSEGDVITVNHGILTYKLQVLELRPSSSVSVLETDIEVDVVGPDSGLESSQ 267
Query: 190 P 190
P
Sbjct: 268 P 268
>gi|125526295|gb|EAY74409.1| hypothetical protein OsI_02297 [Oryza sativa Indica Group]
Length = 504
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 94/170 (55%), Gaps = 20/170 (11%)
Query: 30 GDKIVMPPSALDRLAYLHI--EYPMLFELS-----------NTSAGRVTYCGVMEFIADE 76
GDKI +PPS+ L+ + PM F LS + A T CGV+EF A E
Sbjct: 26 GDKIKLPPSSFKELSDEGALDKGPMYFRLSKVRDSVPGARQDNDADEATCCGVLEFTARE 85
Query: 77 GLIYLPYWMMENMLLQEGD-----IVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLET 131
G L + N+ GD ++EV+ SL KG+Y KL+P F D+ N +AVLET
Sbjct: 86 GSAELTPHVWNNLF--RGDSPDVPLIEVRYVSLPKGTYAKLKPEGVGFSDLPNHRAVLET 143
Query: 132 TLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPP 181
LR+++ L+ D ++V Y +Y + V+E KP+++VS++ETD EVD P
Sbjct: 144 ALRNHATLSENDFVVVNYGQLQYKLKVLELKPASSVSVLETDVEVDIEGP 193
>gi|70952278|ref|XP_745318.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56525603|emb|CAH79199.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 166
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 67/89 (75%)
Query: 85 MMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDT 144
MM+ + L+EGDIV V + SL KG++VKL+P +KDF+++SN + VLET LR+Y+ LT GD
Sbjct: 1 MMQQLCLKEGDIVRVTSISLPKGTFVKLKPCSKDFMELSNHRTVLETALRNYATLTIGDN 60
Query: 145 IMVPYNNKKYYINVVETKPSTAVSIIETD 173
I++ Y K Y I +V+ KP+ A +IIETD
Sbjct: 61 IVIHYLGKTYEIKIVDLKPAFACTIIETD 89
>gi|169154402|emb|CAQ13303.1| ubiquitin fusion degradation 1-like [Danio rerio]
Length = 100
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 62/81 (76%), Gaps = 4/81 (4%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRCY +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 19 FSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78
Query: 66 YCGVMEFIADEGLIYLPYWMM 86
+CGV+EF+ADEG YLP+W+
Sbjct: 79 HCGVLEFVADEGFCYLPHWLF 99
>gi|154346738|ref|XP_001569306.1| putative ubiquitin fusion degradation protein, partial [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134066648|emb|CAM44447.1| putative ubiquitin fusion degradation protein, partial [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 165
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 90/153 (58%), Gaps = 1/153 (0%)
Query: 9 AFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCG 68
++E + S +++ + G ++++P S LD L + + YP+ FE+ S RV Y
Sbjct: 7 SYETRLVAVSASSVNQQRINYGSRVLLPSSVLDDLCRMTMVYPLQFEIITPSKKRV-YAA 65
Query: 69 VMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAV 128
V+EF A G + LP WM +++ L+ +V+V++ SL GS VKL+PH K + NP+ +
Sbjct: 66 VLEFNAQAGSVVLPDWMFQHLGLRGTMVVKVQSCSLPPGSLVKLRPHQKALVMFENPRNL 125
Query: 129 LETTLRSYSCLTTGDTIMVPYNNKKYYINVVET 161
LE L Y LT G TI++ Y ++++ +++VE
Sbjct: 126 LELRLAQYPVLTKGTTIVISYVDREFQLDLVEI 158
>gi|68075987|ref|XP_679913.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56500762|emb|CAH93868.1| conserved hypothetical protein [Plasmodium berghei]
Length = 132
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 67/89 (75%)
Query: 85 MMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDT 144
MM+ + L+EGDIV V + SL KG++VKL+P +KDF+++SN + VLET LR+Y+ LT GD
Sbjct: 1 MMQQLCLKEGDIVRVTSISLPKGTFVKLKPCSKDFMELSNHRTVLETALRNYATLTIGDN 60
Query: 145 IMVPYNNKKYYINVVETKPSTAVSIIETD 173
I++ Y K Y I +V+ KP+ A +IIETD
Sbjct: 61 IVIHYLGKTYEIKIVDLKPAFACTIIETD 89
>gi|83273516|ref|XP_729433.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23487211|gb|EAA20998.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 105
Score = 101 bits (251), Expect = 5e-19, Method: Composition-based stats.
Identities = 47/89 (52%), Positives = 67/89 (75%)
Query: 85 MMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDT 144
MM+ + L+EGDIV V + SL KG++VKL+P +KDF+++SN + VLET LR+Y+ LT GD
Sbjct: 1 MMQQLCLKEGDIVRVTSISLPKGTFVKLKPCSKDFMELSNHRTVLETALRNYATLTIGDN 60
Query: 145 IMVPYNNKKYYINVVETKPSTAVSIIETD 173
I++ Y K Y I +V+ KP+ A +IIETD
Sbjct: 61 IVIHYLGKTYEIKIVDLKPAFACTIIETD 89
>gi|340057372|emb|CCC51717.1| putative ubiquitin fusion degradation protein [Trypanosoma vivax
Y486]
Length = 287
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 116/241 (48%), Gaps = 23/241 (9%)
Query: 27 LENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMM 86
+E+ ++++P L L+ + YP+ F + S + Y GV++F A G+I +P WMM
Sbjct: 33 IESSARVLLPFDCLAELSSKSVPYPLQFRIR--SGFKTCYAGVLDFTAPTGIIIVPQWMM 90
Query: 87 ENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDTIM 146
+ ++ GD V ++ L+ G +KL+P F+++S+P+ VLE L Y LT G +I+
Sbjct: 91 PALGVEVGDTVLIETCVLSPGKLIKLRPQESSFIELSDPRQVLEMRLNEYPVLTKGTSIV 150
Query: 147 VPYNNKKYYINVVETKPST-----AVSIIETDCE-----VDFIPPLDF-KEPEKPSSSSL 195
+ Y + I+V++ A+S + D E V+F PLD P++ + L
Sbjct: 151 LQYAGHDFIIDVIDILDEAGNTVDAISTVRADAEATELKVEFERPLDMPPSPKEMPITEL 210
Query: 196 SNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTGSGRCLNGKS 255
N V + +DFK P + + E +PF+G GR +N +
Sbjct: 211 ENYETKPVVDLSGVDFKPPTITGKAQV----------ESIATTTTHTPFSGLGRRINEQE 260
Query: 256 S 256
+
Sbjct: 261 T 261
>gi|429963358|gb|ELA42902.1| hypothetical protein VICG_00217 [Vittaforma corneae ATCC 50505]
Length = 236
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 89/158 (56%), Gaps = 3/158 (1%)
Query: 32 KIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLL 91
K+++P L L +I+ P +FE+S+ + T C V++F+ D+ + +P WM E + L
Sbjct: 33 KVLLPHYVLKDLVAFNIQPPYVFEISHENGIYKTVCSVLDFLLDDDEVVVPSWMFEQLCL 92
Query: 92 QEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDTIMVPYNN 151
D V +K + KG VKL PH+ +FL++ N K LE TL +Y L+ GD I++ +
Sbjct: 93 DTADKVFLKQIEIEKGEGVKLLPHSVEFLELENHKKELEKTLTNYHVLSYGDEILLYFEE 152
Query: 152 K---KYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
++ + + + + I++TD +VDF PL +KE
Sbjct: 153 IGKCRFTVTKIYPEHLDVIYIVDTDLKVDFDEPLGYKE 190
>gi|145509186|ref|XP_001440537.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407754|emb|CAK73140.1| unnamed protein product [Paramecium tetraurelia]
Length = 285
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 129/263 (49%), Gaps = 29/263 (11%)
Query: 23 DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFEL-SNTSAGRVTYCGVMEFIADEGLIYL 81
+K + +G++I++PPS L + ++ M F+L S + Y GV+EF ADEG +
Sbjct: 18 NKKIINHGNRILLPPSILLEICNVYCG-TMTFKLQSVLEEKKSIYVGVLEFTADEGTCVV 76
Query: 82 PYWMMENMLLQEGDIVEVKNASLAK-GSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLT 140
P W+ + M G + + + K GS +K+QPH F+ +S+PK +L+T L++++CLT
Sbjct: 77 PDWIFDAMGFSNGLSIPINCNRINKFGSLIKVQPHKSAFIKLSDPKDILKTYLKNFTCLT 136
Query: 141 TGDTIMVPYNNKKYYINVVETKP---STAVSIIETDCEVDFIPPLDFK-EPEKPSSSSLS 196
+TI + Y + Y I++V+ +P A+ I E ++D + PLD P+ SS +
Sbjct: 137 QDETITINYQDVNYLIDIVKVEPINKHNAICIDEFYFDIDLMDPLDLTVHPKLLFESSEA 196
Query: 197 NRTLPEVKEEPPLDFKG--------PEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTGSG 248
+ E+ P+ F+G P SS P VK+ P+K F
Sbjct: 197 QQEKIITCEQQPV-FQGIGILIGGEPLNTDQSSHQKIDMP-VKQYDPRKQKLF------- 247
Query: 249 RCLNGKSSTQPTV--SPSSPLID 269
NG QP V PS L +
Sbjct: 248 ---NGLRQVQPNVFYGPSVKLFN 267
>gi|345316106|ref|XP_001520127.2| PREDICTED: ubiquitin fusion degradation protein 1 homolog,
partial [Ornithorhynchus anatinus]
Length = 154
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 62/79 (78%), Gaps = 4/79 (5%)
Query: 10 FERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
F +YRC+ +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L+N ++ R+T
Sbjct: 18 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRLT 77
Query: 66 YCGVMEFIADEGLIYLPYW 84
+CGV+EF+ADEG+ YLP+W
Sbjct: 78 HCGVLEFVADEGICYLPHW 96
>gi|428184700|gb|EKX53554.1| hypothetical protein GUITHDRAFT_160865 [Guillardia theta CCMP2712]
Length = 392
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 101/214 (47%), Gaps = 39/214 (18%)
Query: 2 YENHHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAY---LHIEYPMLFELSN 58
YE F YR ++ + H D++ +PPSAL+ L + + + P+ FEL+
Sbjct: 70 YEKTGGVDFVETYRAVVLAREEWSH---SDRVTLPPSALNALQFKGAIDVGGPLFFELTT 126
Query: 59 TSAGRVTYCGVMEFIADEGLIYLP--YWMMENMLLQEGDIVE--------VKNASLAKGS 108
GR T+CGV+EF+A+E I +P M + + + +E K L KG
Sbjct: 127 KEGGR-THCGVLEFVAEEETIGIPPKVQMCLGAVTEANETIEGGFSTRIQTKYVRLPKGE 185
Query: 109 YVKLQPHTKDF------LDISNPK----------------AVLETTLRSYSCLTTGDTIM 146
V LQP K F LD+ K VL T L+ S LT GD +
Sbjct: 186 SVSLQPRNKSFSDYMSSLDMKQSKPVYDSSRGKWVLPGLEGVLHTALQGLSTLTVGDVVK 245
Query: 147 VPYNNKKYYINVVETKPSTAVSIIETDCEVDFIP 180
V +N+K++ + V++ +P AV +++TD +VD P
Sbjct: 246 VVHNDKEFELQVLQLQPEDAVMLVDTDIQVDITP 279
>gi|123477247|ref|XP_001321792.1| ubiquitin fusion degradation protein [Trichomonas vaginalis G3]
gi|121904625|gb|EAY09569.1| ubiquitin fusion degradation protein, putative [Trichomonas
vaginalis G3]
Length = 281
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 89/170 (52%), Gaps = 17/170 (10%)
Query: 40 LDRLAYLHIEYPML-----------FELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMEN 88
L++ +Y+ +E ML F+++N Y EF AD+G + +PYW+M
Sbjct: 5 LNQTSYVIVETAMLNQQMMENQMITFKITNPRTQESAYAVEREFTADQGTVIVPYWIMAK 64
Query: 89 MLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLD-ISNPKAVLETTLRSYSCLTTGDTIMV 147
+ + EGD V++ L + LQP TK F + I P+ VLE LR+Y CLT G TI +
Sbjct: 65 IGVDEGDTVQISTVELPAATRTVLQPKTKQFAENIKEPRIVLERELRNYPCLTQGSTIEI 124
Query: 148 PYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLD-----FKEPEKPSS 192
+ N Y + V++T+P AV + D VDF P ++ + EP+ SS
Sbjct: 125 TFANVVYPLYVLKTEPLPAVRCRDVDMIVDFAPLIEEFQHHWNEPDTDSS 174
>gi|440492832|gb|ELQ75365.1| Ubiquitin fusion-degradation protein [Trachipleistophora hominis]
Length = 225
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 90/160 (56%), Gaps = 4/160 (2%)
Query: 30 GDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENM 89
G K ++P ++ L L I P FE+S+++ V++ GV+EF A I +P W+ + +
Sbjct: 33 GGKALLPQRVIEDLVNLQIPAPYTFEISHSNRLYVSHTGVLEFTARGEEIVVPEWLYQQL 92
Query: 90 LLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDTIMV-- 147
+ + +V V L G +KL PHT DFL+I +PK LE L +Y LT GD I+
Sbjct: 93 EMDQCGLVTVTYKQLMPGRSIKLLPHTTDFLEIESPKRELEKCLVNYQVLTCGDEIVCSF 152
Query: 148 -PYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
Y ++ +N +E A+ I++TD V+F+PP+ ++E
Sbjct: 153 DEYGAMRFTVNQIEPD-DDAIYIVDTDLIVEFLPPIGYEE 191
>gi|429966458|gb|ELA48455.1| hypothetical protein VCUG_00064 [Vavraia culicis 'floridensis']
Length = 228
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 101/187 (54%), Gaps = 6/187 (3%)
Query: 3 ENHHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAG 62
+N +D + K+R P + G K ++P ++ L L I P FE+S+++
Sbjct: 8 QNDYDLSL--KWRLIPTKYPSNNPNNFGGKALLPQRVIEDLVNLQIPAPYTFEISHSNRL 65
Query: 63 RVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDI 122
V++ GV+EF A I +P W+ + + + + +V V L G +KL PHT DFL+I
Sbjct: 66 YVSHTGVLEFTARGEEIVVPEWLYQQLEMDQCGLVTVTYKQLMPGRSIKLLPHTTDFLEI 125
Query: 123 SNPKAVLETTLRSYSCLTTGDTIMVPYNN---KKYYINVVETKPSTAVSIIETDCEVDFI 179
+PK LE L +Y LT GD I+ ++ ++ +N +E A+ I++TD V+F+
Sbjct: 126 ESPKRELEKCLVNYQVLTCGDEIVCSFDEYGVMRFTVNQIEPD-DDAIYIVDTDLIVEFL 184
Query: 180 PPLDFKE 186
PP+ ++E
Sbjct: 185 PPIGYEE 191
>gi|223999983|ref|XP_002289664.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974872|gb|EED93201.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 321
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 98/199 (49%), Gaps = 27/199 (13%)
Query: 18 PISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNT---SAGRV---------- 64
P+ H+ GDK+ +P + D + E P LFE+S +A RV
Sbjct: 118 PVGVFSHGHIYTGDKMSLPRNFWDAITSSKAEVPWLFEVSRVDGVTAPRVELPADEHHHA 177
Query: 65 -------TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVK-NASLAKGSYVKLQPHT 116
G ++F + + +LP WM + + L+ D+V++K + GS V+L+PHT
Sbjct: 178 TSATLSRAVGGALDFRSPDNYAFLPPWMFKALGLRPRDVVDIKLTTTTPPGSAVRLRPHT 237
Query: 117 KDFLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPS------TAVSII 170
F++I N +AVLET L+ YS LT G TI Y ++YY +VV+ + + +
Sbjct: 238 SSFVNIGNHQAVLETELKHYSALTLGSTIPFDYRGERYYFDVVDLRSAPRGERVPMAKVQ 297
Query: 171 ETDCEVDFIPPLDFKEPEK 189
+ D +F+ P D +P+K
Sbjct: 298 DCDIAAEFVRPKDQLKPKK 316
>gi|320167025|gb|EFW43924.1| ubiquitin fusion degradation protein [Capsaspora owczarzaki ATCC
30864]
Length = 857
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 95/209 (45%), Gaps = 47/209 (22%)
Query: 22 IDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSA-------------------- 61
+ K +E GDKI +P S L + YPM FE++ A
Sbjct: 238 VGKLGMELGDKINLPASVLMFAVQRELTYPMAFEMTKHVAEPAPPSSTTANSSTTAATTN 297
Query: 62 -------------------------GRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDI 96
+ GV++F DEG LP WMM+++ + GD
Sbjct: 298 TDEPATATTTSTTTPTTTTTATPPPPANVHGGVLDFTTDEGTAILPSWMMKHIGAETGDQ 357
Query: 97 VEVKNASLAKGSYVKLQPHTKDFLDI--SNPKAVLETTLRSYSCLTTGDTIMVPYNNKKY 154
V + A L KG +VKLQP + +L + ++VLE LR+Y LT G T+ + ++ ++
Sbjct: 358 VVFRYAKLPKGEFVKLQPVSTTWLAVPFEQRRSVLEYHLRNYQTLTEGMTVSIEHHQSQH 417
Query: 155 YINVVETKPSTAVSIIETDCEVDFIPPLD 183
V+E KP+ A+SII+TD D + PL+
Sbjct: 418 DFKVLECKPARAISIIDTDIVTDVVEPLE 446
>gi|156602887|ref|XP_001618730.1| hypothetical protein NEMVEDRAFT_v1g153571 [Nematostella
vectensis]
gi|156200119|gb|EDO26630.1| predicted protein [Nematostella vectensis]
Length = 82
Score = 94.7 bits (234), Expect = 5e-17, Method: Composition-based stats.
Identities = 41/76 (53%), Positives = 58/76 (76%), Gaps = 3/76 (3%)
Query: 13 KYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGV 69
+YRCY ++ + ++ +E G KI+MPPSALD+L L+I YPMLF+L+N R T+CGV
Sbjct: 2 QYRCYSVAMLPGNERKDVERGGKIIMPPSALDQLTRLNIVYPMLFKLTNNRIDRSTHCGV 61
Query: 70 MEFIADEGLIYLPYWM 85
+EF+ADEG IYLP+W+
Sbjct: 62 LEFVADEGKIYLPHWV 77
>gi|384485380|gb|EIE77560.1| hypothetical protein RO3G_02264 [Rhizopus delemar RA 99-880]
Length = 646
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 90/166 (54%), Gaps = 8/166 (4%)
Query: 21 FIDKPHLE--NGDKIVMPPSALDRL----AYLHIEYPMLFELSNTSAGRVTYCGVMEFIA 74
F+ K L+ GDKI +P AL++L + + P+ FEL + +G +CGV EF +
Sbjct: 14 FVQKASLDLNYGDKIKLPAIALEQLLAKAGHSTLPSPLTFELRHPHSGAFIHCGVKEFAS 73
Query: 75 DEG-LIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTL 133
LP W+M + L+ GD V +K L KG++ +L+P + ++ DI++ +A LE L
Sbjct: 74 SSSDSAELPEWIMTALGLKAGDRVLIKLQLLPKGTWTQLKPLSDNYQDITDYRAALEAHL 133
Query: 134 RS-YSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDF 178
R Y+ LT G + Y + Y V E KP AV I +TD EVD
Sbjct: 134 RGHYNTLTKGQVLFCRYGEQTYPFQVTELKPQEAVLINDTDLEVDI 179
>gi|348680464|gb|EGZ20280.1| hypothetical protein PHYSODRAFT_497564 [Phytophthora sojae]
Length = 522
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 101/205 (49%), Gaps = 26/205 (12%)
Query: 2 YENHHDAAFERKYRCYPISFIDK----PHLENGDKIVMPPSALDRLA-YLHIEYPML-FE 55
E A E + I ++ + P +GDKI +P SAL+ L +E + FE
Sbjct: 59 LERQEQQALEEQRLTGGIKYLQRLRPVPTASDGDKISLPVSALEELNPQNALERGVFTFE 118
Query: 56 LS----------------NTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEG---DI 96
LS N R+T+ GV+EF+A+EG + LP + ++ Q D
Sbjct: 119 LSFEQQQQKQEEEEEAGENVPLKRLTHAGVLEFVAEEGTVGLPPKVAASLFGQSRQLPDS 178
Query: 97 VEVKNASLAKGSYVKLQPHTKDFLDIS-NPKAVLETTLRSYSCLTTGDTIMVPYNNKKYY 155
V+V+ L KG + LQP F D + K +LE +L++++ LT GD + V + + +
Sbjct: 179 VQVRFVRLEKGQFASLQPRGDGFSDRQIDFKHMLERSLKAHTTLTEGDVLFVRHGRETFE 238
Query: 156 INVVETKPSTAVSIIETDCEVDFIP 180
+ V E +P AV+I+ TD EVD IP
Sbjct: 239 VLVAELRPERAVNILNTDLEVDIIP 263
>gi|300120669|emb|CBK20223.2| unnamed protein product [Blastocystis hominis]
Length = 198
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 87/163 (53%), Gaps = 12/163 (7%)
Query: 28 ENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYW--- 84
+NGD +++ ++D L ++ PM F + T+ TYC V EF A+ G ++P W
Sbjct: 33 DNGDHVILSSYSMDLLFRKTVQNPMKFRI--TTEKYTTYCSVEEFTANTGTCFMPQWVFL 90
Query: 85 -------MMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYS 137
MM ++ L+ G + ++N S+ KG V ++ ++ L + + KA E LR +
Sbjct: 91 LNCNDSQMMNDLDLKIGSYIRIENISIPKGKSVAVRICNEELLSVPDIKATFEEQLRHFV 150
Query: 138 CLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIP 180
L G + + +NN++Y+I++V +P + I T+ +DF+P
Sbjct: 151 VLAEGGHVPIKFNNQQYFIDIVHCEPEPVIDINNTNLVIDFVP 193
>gi|449671915|ref|XP_002163601.2| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Hydra
magnipapillata]
Length = 100
Score = 91.3 bits (225), Expect = 6e-16, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 58/80 (72%), Gaps = 3/80 (3%)
Query: 9 AFERKYRCYPISFI---DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVT 65
+F +YRCY ++ + ++ +E G KI++PPSALD L L+I YPMLF+L+N + T
Sbjct: 14 SFNTQYRCYSVAMLSGNERKDVERGAKIILPPSALDILTRLNIVYPMLFKLTNHRLKKYT 73
Query: 66 YCGVMEFIADEGLIYLPYWM 85
+CGV+EF+ADEG Y+P+W+
Sbjct: 74 HCGVLEFVADEGKAYIPHWV 93
>gi|255583158|ref|XP_002532345.1| hypothetical protein RCOM_0413810 [Ricinus communis]
gi|223527962|gb|EEF30047.1| hypothetical protein RCOM_0413810 [Ricinus communis]
Length = 253
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 63/129 (48%), Gaps = 40/129 (31%)
Query: 1 AYENHHDAAFERKYRCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTS 60
Y++ +++F Y CYP+S I HLE+GD+I MP S LDRL LH+++PMLFE+ N S
Sbjct: 39 GYQSPEESSFRSTYMCYPVSLIGNDHLEHGDQITMPQSVLDRLLDLHVDFPMLFEICNDS 98
Query: 61 AGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFL 120
+ KG+YVKLQPH+ DF+
Sbjct: 99 KYQT----------------------------------------GKGTYVKLQPHSMDFM 118
Query: 121 DISNPKAVL 129
I NPKA L
Sbjct: 119 GILNPKAAL 127
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 243 PFTGSGRCLNGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNA 302
PFTG R L+ K P +S + +Q + + S SR++ GK+VFGS+
Sbjct: 163 PFTGVARHLDEK----PGAELASSSVQKNKQTVDTDTSMATESQFRSRKRPGKVVFGSSD 218
Query: 303 NQSSNGTPKVLPKSSSGEPPQVEEKPKFQAFTGKKYSLRG 342
+S + PK K + E P+ + +FQ FTGKK+SL G
Sbjct: 219 AESKSKEPK--NKIAKTETPK---RKQFQPFTGKKHSLAG 253
>gi|221054596|ref|XP_002258437.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193808506|emb|CAQ39209.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 297
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 91/184 (49%), Gaps = 32/184 (17%)
Query: 27 LENGDKIVMPPSALDRLAYLHIEYPMLF----------------ELSNTSA--------- 61
++ DK+ +P D L HIE P F +S+T+A
Sbjct: 109 IQYSDKVSLPVFIYDILINKHIEVPWNFVIEKVDIKKTPFYKNVRMSDTNAFSTYPNINK 168
Query: 62 -GRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFL 120
RV + V++F A + I+LP W+M+++ L D+V ++ L S V LQPH K+F
Sbjct: 169 LDRV-FINVLDFKAKKNFIFLPTWIMQSLQLDCFDVVRLRFTKLETASSVVLQPHHKNFF 227
Query: 121 DISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVET-----KPSTAVSIIETDCE 175
++S+PK LE LR YSCLT TI + +++ +Y+ +V++ K SI + D
Sbjct: 228 NLSDPKKTLEEKLRYYSCLTKNSTISIKHDDSEYHFDVIKMDAGKKKDVEVASIQDADVI 287
Query: 176 VDFI 179
DF+
Sbjct: 288 FDFV 291
>gi|123390862|ref|XP_001299964.1| ubiquitin fusion degradation protein [Trichomonas vaginalis G3]
gi|121880919|gb|EAX87034.1| ubiquitin fusion degradation protein, putative [Trichomonas
vaginalis G3]
Length = 409
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 89/177 (50%), Gaps = 9/177 (5%)
Query: 15 RCYPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYP-----MLFELSNTSAGRVTYCGV 69
R P + D P LE ++++P L+ +A +H + +F ++NT + Y G+
Sbjct: 7 RVVPPGYYDLPKLEYTGRVMLP---LEAIAQIHNNFDNGPTISVFCITNTRTKQKVYAGM 63
Query: 70 MEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVL 129
+ +G I +P WMM+ + +GD+V V++A G QP F IS+P VL
Sbjct: 64 APSDSRDGDIVMPLWMMDFLGANQGDMVRVQSARPPNGRSATFQPLDSSFNKISDPVTVL 123
Query: 130 ETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPP-LDFK 185
+LR + LT G + + + + Y + V++T+PS + I + +F PP DFK
Sbjct: 124 SKSLRDFPVLTQGSILPIDFAKRIYKLRVLKTEPSDGILINNVNLNTEFAPPDTDFK 180
>gi|307111367|gb|EFN59601.1| hypothetical protein CHLNCDRAFT_56460 [Chlorella variabilis]
Length = 441
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 91/170 (53%), Gaps = 15/170 (8%)
Query: 23 DKPHLENGDKIVMPPSA----LDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGL 78
DK DKI++PPSA + + AY + PM F+L+N +AG T+ G++EF A EG
Sbjct: 97 DKGIKRAADKILLPPSAGASLMSQDAYKN--GPMFFQLTN-AAGNRTHAGLLEFSAAEGF 153
Query: 79 IYLPYWMMENML----LQEGDIVEVKNA--SLAKGSYVKLQPHTKDFLD--ISNPKAVLE 130
+ LP ++ ++ +E + ++ A L KG QP + F + + VLE
Sbjct: 154 VALPRKVICSLWGPDATEEHCVGRLRVAYRRLPKGERAVFQPRSASFQQEVGEDIRGVLE 213
Query: 131 TTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIP 180
L +SCLT GD + VP+ ++Y + + + P AVS+I+TD E + P
Sbjct: 214 GALLQHSCLTRGDWLAVPHGGQRYDLRICDLHPEAAVSVIDTDLEAEINP 263
>gi|156097334|ref|XP_001614700.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148803574|gb|EDL44973.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 295
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 86/184 (46%), Gaps = 32/184 (17%)
Query: 27 LENGDKIVMPPSALDRLAYLHIEYPMLF----------------ELSNTSA--------- 61
++ DK +P D L HIE P F +SNT+A
Sbjct: 107 IQYSDKASLPVFIYDILLNKHIEVPWNFVIEKVDIKKTPFYQNVRMSNTNAFSTYPNVNK 166
Query: 62 -GRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFL 120
RV + V++F A + I+LP W+M+++ L D+V ++ L S V LQPH K+F
Sbjct: 167 LDRV-FINVLDFKAKKNFIFLPAWIMQSLQLDCFDVVRIRFVKLETASSVVLQPHHKNFF 225
Query: 121 DISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVET-----KPSTAVSIIETDCE 175
++S PK LE LR YSCLT TI + ++ Y+ +V+ K SI + D
Sbjct: 226 NLSEPKKTLEEKLRYYSCLTKNGTICINHDGSDYHFDVIRMDAGKKKDVEVASIQDADVI 285
Query: 176 VDFI 179
DF+
Sbjct: 286 FDFV 289
>gi|389583003|dbj|GAB65739.1| hypothetical protein PCYB_072410, partial [Plasmodium cynomolgi
strain B]
Length = 278
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 87/184 (47%), Gaps = 32/184 (17%)
Query: 27 LENGDKIVMPPSALDRLAYLHIEYPMLF----------------ELSNTSA--------- 61
++ DK +P D L HIE P F +S+T+A
Sbjct: 90 IQYSDKASLPVFIYDILLNKHIEVPWNFVIEKVDIKKKPFYKNMRMSDTNAFSTYPNINK 149
Query: 62 -GRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFL 120
RV + V++F A + I+LP W+M+++ L+ D+V ++ L S V LQPH K F
Sbjct: 150 LDRV-FINVLDFKAKKNFIFLPTWIMQSLQLECFDVVRIRFVKLETASSVVLQPHHKKFF 208
Query: 121 DISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVET-----KPSTAVSIIETDCE 175
++S PK LE LR YSCLT TI + ++ YY +V++ K SI + D
Sbjct: 209 NLSEPKKTLEEKLRYYSCLTKHGTICINHDGVDYYFDVIKMDAGKKKDVEVASIQDADVI 268
Query: 176 VDFI 179
DF+
Sbjct: 269 FDFV 272
>gi|296005209|ref|XP_002808936.1| apicoplast Ufd1 precursor [Plasmodium falciparum 3D7]
gi|225631822|emb|CAX64217.1| apicoplast Ufd1 precursor [Plasmodium falciparum 3D7]
Length = 296
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 69/120 (57%), Gaps = 5/120 (4%)
Query: 65 TYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISN 124
+ V++F A + I+LP W+M+++ L D++ ++ L S V LQPH K F D+ N
Sbjct: 171 VFINVLDFKAKKNFIFLPTWVMKSLNLNCFDVIRLRFVKLETASSVVLQPHEKKFFDLEN 230
Query: 125 PKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVV----ETKPSTAV-SIIETDCEVDFI 179
PK +LE LR YSC+T TI + +++ YY +V+ E K T V SI + D DF+
Sbjct: 231 PKKILEEKLRYYSCITRNSTISIKHDDVVYYFDVIRIDSEKKKDTEVASIQDADVIFDFV 290
>gi|320166190|gb|EFW43089.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 871
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 90/189 (47%), Gaps = 24/189 (12%)
Query: 17 YPISFIDKPHLENGDKIVMPPSALDRLA-------------YLHIEYPMLFELS------ 57
+P S +D L GD++ +P SA+++LA L P +L+
Sbjct: 74 FPASHLDGSMLLRGDRVRLPQSAMEQLAASGQLGTRTRPLMLLAAATPRALQLALADKKQ 133
Query: 58 NTSA----GRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQ 113
+T A +V CGV++F AD G LP WM + + LQ GD + A L + ++Q
Sbjct: 134 DTQATGGSNKVVACGVLDFGADNGQADLPRWMEQALQLQHGDSISFVVAELPRAESCEIQ 193
Query: 114 PHTKDFLDISNPKAVLETTLRS-YSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIET 172
F + + +A LE+ L + + LT G+ I V Y + + + VV+ P+ +++T
Sbjct: 194 ACDLAFYRLQDQRAALESALMTQCTTLTKGERIRVEYEGRLHTLFVVDLLPADRCCVVDT 253
Query: 173 DCEVDFIPP 181
D EV + P
Sbjct: 254 DVEVKILRP 262
>gi|397617189|gb|EJK64321.1| hypothetical protein THAOC_14958 [Thalassiosira oceanica]
Length = 364
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 75/129 (58%), Gaps = 7/129 (5%)
Query: 68 GVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAK-GSYVKLQPHTKDFLDISNPK 126
G+++ + +LP WM ++ L+ D+V+V+ A+ GS V+L+PHT FL I+N +
Sbjct: 230 GLLDCRSPSNYAFLPRWMFRSLGLRPYDVVDVRLATKTPPGSAVRLRPHTSAFLSINNHQ 289
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIE----TDCEV--DFIP 180
AVLET L+ YS LT G TI Y ++YY +VV+ + + + TDC++ +F+
Sbjct: 290 AVLETELKHYSALTLGTTIPFDYRGERYYFDVVDLRAAPRGERVPTAKVTDCDIATEFVR 349
Query: 181 PLDFKEPEK 189
D +P K
Sbjct: 350 ARDQLKPRK 358
>gi|387219253|gb|AFJ69335.1| ubiquitin fusion degradation 1 [Nannochloropsis gaditana CCMP526]
Length = 264
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 92/199 (46%), Gaps = 30/199 (15%)
Query: 18 PISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFE---LSNTSAG------------ 62
P+ I L+ DKI++P S + + +E P FE L + G
Sbjct: 37 PLGSILHGKLQYSDKIMLPKSFIYEVLGRKLEPPWHFEITPLDDLYTGAPSPFLAPSLAH 96
Query: 63 -------RVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPH 115
+ + +F A E I++P WMM ++ L+ D+V ++ L +G V QPH
Sbjct: 97 WRRRHPVQALHASNFDFRAPENYIFMPDWMMLSLRLRPRDVVAMRFVRLPEGGLVSFQPH 156
Query: 116 TKDFLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVET-----KPSTAVSII 170
F ++N AVLE L+ YSC+T G TI +N K+Y ++V+ET A+ I
Sbjct: 157 QAAFNKLANVHAVLEQELKYYSCVTQGTTIRFKHNGKEYALDVLETLGPKDVKVDAIKIQ 216
Query: 171 ETDCEVDFIPPLDFKEPEK 189
++D D P KE EK
Sbjct: 217 DSDIRTDIRPS---KEEEK 232
>gi|325180374|emb|CCA14777.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325192321|emb|CCA26767.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 507
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 92/167 (55%), Gaps = 20/167 (11%)
Query: 29 NGDKIVMPPSALDRL----AYLHIEYPMLFELS----NTS-AGRVTYCGVMEFIADEGLI 79
+GD I +PPSAL+ L A+ ++ FELS N + +VT+ V+EF A+E I
Sbjct: 90 DGDLITLPPSALEELTAQEAFRVGKFT--FELSVMLPNVAPCLQVTHASVLEFTAEEETI 147
Query: 80 YLPYWMMENMLLQEG--DIVEVKNASLAKGSYVKLQPHTKDF----LDISNPKAVLETTL 133
+P + +L + ++++ L +G + + QP + F +D+ K VLE +L
Sbjct: 148 GVPPKVARCLLFSQSVPKSIQIRFVRLERGLFARFQPKEEGFGAREIDL---KLVLERSL 204
Query: 134 RSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIP 180
++ LT GDT++V + K + I+V+ +P A+ I+ TD EVD +P
Sbjct: 205 HRHTTLTIGDTVLVRHGRKTFEISVIHAEPEEAIDILNTDLEVDIMP 251
>gi|70953485|ref|XP_745841.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56526287|emb|CAH80160.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 201
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 80/168 (47%), Gaps = 17/168 (10%)
Query: 17 YPISFIDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADE 76
+ I +D E DKI MP E M N + + V++F A +
Sbjct: 41 FVIEKVDIKKKEIYDKITMP------------EITMPNNYKNINKLDRIFINVLDFKAKK 88
Query: 77 GLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSY 136
++LP ++M+++ L+ D+V +K L + V LQPH K F + PK +LE LR Y
Sbjct: 89 NFLFLPNYIMKSLQLKCFDVVRLKFVKLETATSVILQPHDKKFFQLDEPKKILEEKLRYY 148
Query: 137 SCLTTGDTIMVPYNNKKYYINVVET-----KPSTAVSIIETDCEVDFI 179
SCLT TI + +NN YY +VV+ K SI + D DF+
Sbjct: 149 SCLTKNSTICIFHNNFDYYFDVVKIDSEKKKDVEVASIQDADVIFDFV 196
>gi|301097625|ref|XP_002897907.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262106655|gb|EEY64707.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 512
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 98/198 (49%), Gaps = 21/198 (10%)
Query: 3 ENHHDAAFERKYRCYPISFIDK----PHLENGDKIVMPPSALDRLA---YLHIEYPMLFE 55
E A E + I ++ + P +GDKI +P SAL+ L L + FE
Sbjct: 60 EMQEQQALEEQRLTGGIKYLQQLRPVPTTGDGDKITLPVSALEELNPQNALDLGV-FTFE 118
Query: 56 LS---NTSAGRV------TYCGVMEFIADEGLIYLPYWMMENMLLQEGDI---VEVKNAS 103
LS + G T+ GV+EF+A+E + LP + ++ + ++V+
Sbjct: 119 LSFDDDQQGGEAPTVRSQTHAGVLEFVAEERTVGLPPKVAASLFRYTKQLPASIQVRFVR 178
Query: 104 LAKGSYVKLQPHTKDFLDIS-NPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETK 162
L KG + L+P + F D + K +LE +L++++ LT GD + V + + + + V E K
Sbjct: 179 LEKGKFASLRPKGEGFGDRQIDFKHMLERSLKAHTTLTEGDVLFVRHGRETFEVLVTELK 238
Query: 163 PSTAVSIIETDCEVDFIP 180
P A++I+ TD EVD IP
Sbjct: 239 PDRAINILNTDLEVDMIP 256
>gi|350592674|ref|XP_001929657.3| PREDICTED: ubiquitin fusion degradation protein 1 homolog, partial
[Sus scrofa]
Length = 170
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 68/139 (48%), Gaps = 30/139 (21%)
Query: 129 LETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPE 188
LE LR+++CLTTGD I + YN K Y + V+ETKP AVSIIE D VDF PL +KEPE
Sbjct: 5 LENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPE 64
Query: 189 KPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTGSG 248
+ +++ E + + + L F F+GSG
Sbjct: 65 R------------QIQHEESAEGEADHGGYAGELG-----------------FRAFSGSG 95
Query: 249 RCLNG-KSSTQPTVSPSSP 266
L+G K +P+ SP P
Sbjct: 96 NRLDGKKKGVEPSPSPIKP 114
>gi|440290960|gb|ELP84259.1| ubiquitin fusion degradation protein, putative [Entamoeba invadens
IP1]
Length = 462
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 81/174 (46%), Gaps = 12/174 (6%)
Query: 16 CYPISFI-DKPHLENGDKIVMPPSALDRLAYLHIEY--PMLFELSNTSAGRVTYCGVMEF 72
CY +F+ K + D++V PP +D++ + E+ P++FE+ NT R CGV F
Sbjct: 16 CYSFAFLAGKIPPQPTDRVVFPPYVMDKVFNQNPEFKSPIMFEIQNTKTKRRLVCGVDNF 75
Query: 73 IADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETT 132
+ + Y+P WMM+ + GD + G V +P F I NPK LE
Sbjct: 76 DSPD-FTYMPQWMMDYLKFNPGDRAIAIKTWVPLGKSVTFKPLQATFYTIENPKQTLEAL 134
Query: 133 LRSYSCLTTGDTIMVPYNNK--------KYYINVVETKPSTAVSIIETDCEVDF 178
LR+Y LT TI N K + + + +P T V I +TD V+F
Sbjct: 135 LRNYVTLTANTTITFQMNTKVDGLTLATDVSVLITDLQPLTTVLIRDTDLNVEF 188
>gi|167390007|ref|XP_001739169.1| ubiquitin fusion degRadation protein [Entamoeba dispar SAW760]
gi|165897218|gb|EDR24444.1| ubiquitin fusion degRadation protein, putative [Entamoeba dispar
SAW760]
Length = 447
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 83/176 (47%), Gaps = 14/176 (7%)
Query: 16 CYPISFIDKPHL-ENGDKIVMPPSALDRLAYLHIEY--PMLFELSNTSA--GRVTYCGVM 70
CYP F+ P + DK+V P LD L + ++ P+LFE+ + S + CGV
Sbjct: 17 CYPFMFMQTPQPPQPTDKVVFPSYVLDELTKQNPDFQAPILFEVKSKSQKFTKRIVCGVE 76
Query: 71 EFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLE 130
F + Y P W+++ + LQ GD V S+ KG V +P F + +PK LE
Sbjct: 77 SF-SSPDFTYFPQWILDYLHLQPGDAATVLKVSIPKGKSVTFKPLQNTFYSVEDPKKTLE 135
Query: 131 TTLRSYSCLTTGDTIMVPYNNKKYYINVV--------ETKPSTAVSIIETDCEVDF 178
LR+Y LT TI N +N+ E +P T++ I ET+ V+F
Sbjct: 136 AILRNYMTLTLNTTITFQMNTVLDGMNIATDVSVLISEVQPFTSIYIRETELIVEF 191
>gi|156087372|ref|XP_001611093.1| ubiquitin fusion degradation protein UFD1 [Babesia bovis T2Bo]
gi|154798346|gb|EDO07525.1| ubiquitin fusion degradation protein UFD1, putative [Babesia bovis]
Length = 297
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 67/132 (50%), Gaps = 6/132 (4%)
Query: 53 LFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKL 112
F+ ++ RV C +F E IYLP WMME+M L+ D V V L +V +
Sbjct: 165 FFDKADGHKERVA-CSSWDFRPQESYIYLPRWMMESMDLRPYDTVYVTQLKLQDAIFVSI 223
Query: 113 QPHTKDFLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINV--VET---KPSTAV 167
P F +S PKAVLE L+ YS LT G TI + + Y++ V +ET K +
Sbjct: 224 SPVESSFFALSAPKAVLEEHLKQYSSLTRGTTIQITHEGITYHLRVNRIETEHCKDAECA 283
Query: 168 SIIETDCEVDFI 179
SI +TD +D +
Sbjct: 284 SIQDTDVSIDLV 295
>gi|428673378|gb|EKX74291.1| signal peptide containing protein [Babesia equi]
Length = 300
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 72/135 (53%), Gaps = 6/135 (4%)
Query: 53 LFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKL 112
F N+ R++ C +F A + I++P WMM+++ ++ DI+ + + L +YVK+
Sbjct: 167 FFSARNSHNERIS-CASFDFRAQDNFIFIPKWMMKSLNIRPYDIIYLSHIQLLDATYVKI 225
Query: 113 QPHTKDFLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVV----ETKPST-AV 167
P K+F D+ PK +LE L+ YS LT G I + + N+ Y + VV E K +
Sbjct: 226 MPMEKEFFDLKEPKLILEQHLKHYSTLTRGAIIPISHKNRLYNLKVVSINTEKKQNIECA 285
Query: 168 SIIETDCEVDFIPPL 182
SI + D VD + +
Sbjct: 286 SIQDIDVAVDLVRAI 300
>gi|67465920|ref|XP_649118.1| ubiquitin fusion degradation protein [Entamoeba histolytica
HM-1:IMSS]
gi|56465483|gb|EAL43735.1| ubiquitin fusion degradation protein, putative [Entamoeba
histolytica HM-1:IMSS]
gi|449705234|gb|EMD45325.1| ubiquitin fusion degradation protein, putative [Entamoeba
histolytica KU27]
Length = 447
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 86/176 (48%), Gaps = 14/176 (7%)
Query: 16 CYPISFIDKPHL-ENGDKIVMPPSALDRLAYLHIEY--PMLFELSNTSAG--RVTYCGVM 70
CYP ++ P + DK+V P LD L + ++ P+LFE+SN S + CGV
Sbjct: 17 CYPFMYMQTPQPPQPTDKVVFPAYVLDELTKQNPDFQAPILFEVSNKSQTFKKRIVCGVE 76
Query: 71 EFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLE 130
F + Y P W+++ + +Q GD+ + + KG V +P F +I +PK LE
Sbjct: 77 SF-SSPDFTYFPQWILDYLHIQPGDVATIFKVLIPKGKSVTFKPLQSTFYNIEDPKKTLE 135
Query: 131 TTLRSYSCLTTGDTIMVPYNNKKYYINVV--------ETKPSTAVSIIETDCEVDF 178
+ LR+Y LT TI N +N+ + +P +++ I ET+ V+F
Sbjct: 136 SILRNYMTLTLNTTITFQMNTIIDGMNIATDVSVLISDVQPFSSIYIRETELVVEF 191
>gi|407041149|gb|EKE40548.1| ubiquitin fusion degradation protein, putative [Entamoeba nuttalli
P19]
Length = 447
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 86/176 (48%), Gaps = 14/176 (7%)
Query: 16 CYPISFIDKPHL-ENGDKIVMPPSALDRLAYLHIEY--PMLFELSNTS--AGRVTYCGVM 70
CYP ++ P + DK+V P LD L + ++ P+LFE+SN S + CGV
Sbjct: 17 CYPFMYMQTPQPPQPTDKVVFPAYVLDELTKQNPDFQAPILFEVSNKSPKFKKRIVCGVE 76
Query: 71 EFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLE 130
F + Y P W+++ + +Q GD+ + + KG V +P F +I +PK LE
Sbjct: 77 SF-SSPDFTYFPQWILDYLHIQPGDVATIFKVLIPKGKSVTFKPLQSTFYNIEDPKKTLE 135
Query: 131 TTLRSYSCLTTGDTIMVPYNNKKYYINVV--------ETKPSTAVSIIETDCEVDF 178
+ LR+Y LT TI N +N+ + +P +++ I ET+ V+F
Sbjct: 136 SILRNYMTLTLNTTITFQMNTIIDGMNIATDVSVLISDVQPFSSIYIRETELIVEF 191
>gi|399949665|gb|AFP65323.1| ubiquitin fusion degradation protein [Chroomonas mesostigmatica
CCMP1168]
Length = 293
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 87/181 (48%), Gaps = 18/181 (9%)
Query: 14 YRCYPISF-IDKPHLENGDKIVMPPSALDRLAY--LHIEYPMLFELSNTSAG-----RVT 65
Y+C+ +S K + ++ + PPS L RL + YPM FEL + + T
Sbjct: 19 YKCFSMSLQYYKCEHQESNRAIFPPSLLSRLKIENYNRNYPMFFELGCNLSDENGNPKKT 78
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYV-----KLQPHTKDFL 120
+ G EFI +EG+ LP W++EN ++ G K+ L + + +L P +FL
Sbjct: 79 HIGAAEFIGEEGIALLPEWVLENANIKNGGNGFFKSVYLPRAENLVMVPRELSPGEGEFL 138
Query: 121 DISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIP 180
K ++E LR+ CLT D I V +K + V + KP +AVS+I D + +
Sbjct: 139 -----KVIMEKKLRNIICLTVSDVIPVRLGSKTITLIVKDVKPGSAVSLINNDIQFSYSI 193
Query: 181 P 181
P
Sbjct: 194 P 194
>gi|123457022|ref|XP_001316242.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121898943|gb|EAY04019.1| hypothetical protein TVAG_055050 [Trichomonas vaginalis G3]
Length = 214
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 4/162 (2%)
Query: 22 IDKPHLENGDKIVMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYL 81
+ + L KI++P + + A L E M F L N + GV EF ++E +
Sbjct: 15 VGRKELNETGKIILPSTII---AKLRNETLMQFLLKNPLTQKTIGAGVEEFSSEEPSCVV 71
Query: 82 PYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK-AVLETTLRSYSCLT 140
P WM EN+ L E D + V+ K + QP + +I N K ++E TLRSY LT
Sbjct: 72 PRWMCENLGLTENDKIVVQFQKFPKIKELIFQPSDNESANILNEKQIIMEYTLRSYPVLT 131
Query: 141 TGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPL 182
G +++ + NK +++ V+ TKP V+ + ++ V F PL
Sbjct: 132 QGSILVINFANKMFFLKVLFTKPERIVNTLSSNPTVTFSRPL 173
>gi|298709434|emb|CBJ31340.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 521
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 105/246 (42%), Gaps = 75/246 (30%)
Query: 30 GDKIVMPPSALDRLAYLHIEY--PMLFELSNTSAGRV----------------------- 64
GDKI++PPSAL+ L+ PMLFEL+ T++G
Sbjct: 93 GDKILLPPSALECLSRQDAVGLGPMLFELTCTTSGAAPTSQQQPEKAPALQGGTITTTRT 152
Query: 65 TYCGVMEFIADEGLIYLPYWMMENML-------------------------------LQE 93
T+ GV+EF+ADEG I LP ++ ++L ++
Sbjct: 153 THAGVLEFVADEGTIGLPRKVVLSLLGAAAHQVPSRTSDENISANDDPENAKAERPAVEG 212
Query: 94 GDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKK 153
+ V V+ LAK ++ ++ P T +S +A+LE +R+++ LT GD + V K+
Sbjct: 213 LENVVVRYVRLAKATFARVVPETVGLSQVSELRAMLEHNMRNHATLTVGDHLSVWRRGKE 272
Query: 154 YYI-------------------NVVETKPSTAVSIIETDCEVDFIPPLDFKEPEKPSSSS 194
+ + VVE +P V++I+TD E++ P +E + +
Sbjct: 273 FSLKSEDSHSPLTPEREPPLTMQVVELRPEPQVTVIDTDMEIELDLPEKAREQLQEKGAQ 332
Query: 195 LSNRTL 200
+TL
Sbjct: 333 DRAKTL 338
>gi|384246973|gb|EIE20461.1| hypothetical protein COCSUDRAFT_43901 [Coccomyxa subellipsoidea
C-169]
Length = 399
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 87/187 (46%), Gaps = 32/187 (17%)
Query: 26 HLENGDKIVMPPSALDRLAYLHIEYP----MLFELSNTSAGRVTYCG------------- 68
L + +++P S D L + + P LFE++++S G T+ G
Sbjct: 56 ELAAAEAVLLPASVGDDL--MRQDAPKNGAQLFEIASSS-GNTTHAGASLCRLMLELQPK 112
Query: 69 ----VMEFIADEGLIYLPYWMMENMLLQ------EGDIVEVKNASLAKGSYVKLQPHTKD 118
V+ F A EG I +P + N EG V+V L KG YV+ QP + D
Sbjct: 113 RPLCVLAFTAAEGTIGMPPQVARNAFGDGASVSPEGATVDVLYRRLPKGEYVRFQPWSAD 172
Query: 119 FLDI--SNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEV 176
F + +AVLE L +S L+ GD I VP+ + + V + +P AVS+I+T+ E
Sbjct: 173 FQREVGGDVRAVLEAALERHSTLSEGDWISVPFAGTAFDLTVQKLRPGRAVSVIDTEMEA 232
Query: 177 DFIPPLD 183
+ P L+
Sbjct: 233 EVEPSLE 239
>gi|156095350|ref|XP_001613710.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148802584|gb|EDL43983.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 685
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 93/177 (52%), Gaps = 12/177 (6%)
Query: 29 NGDKIVMPPSALDRLA----YLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYW 84
+ DK+++P S L L +E+P F L N +T+ V+EF ++EG+I++
Sbjct: 80 HSDKVILPVSILKTLEKGFYRSEVEFPYTFSLKNVQNNYITHVCVLEFSSNEGIIHVSEN 139
Query: 85 MMENM-LLQEGDIVE--VKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLR-SYSCLT 140
+ EN+ + Q IV V A++ K ++K + ++ +I K +L+ L +YS LT
Sbjct: 140 VKENLGIKQSSGIVRLLVTYANIPKCDFIKFESLNENTSNIKFMKNLLQNELSLNYSTLT 199
Query: 141 TGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEKPSSSSLSN 197
GD + + NN +YI+ E +P AVS+I TD VD + E SS+ LS+
Sbjct: 200 LGDYVHI--NNLSFYIS--ELEPDNAVSLINTDITVDICERKNVGEKRDDSSNRLSD 252
>gi|242794399|ref|XP_002482364.1| ubiquitin fusion degradation protein (Ufd1), putative [Talaromyces
stipitatus ATCC 10500]
gi|218718952|gb|EED18372.1| ubiquitin fusion degradation protein (Ufd1), putative [Talaromyces
stipitatus ATCC 10500]
Length = 1257
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 76/146 (52%), Gaps = 16/146 (10%)
Query: 50 YPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLL---------QEGDIVEVK 100
+P+ F L N GRV Y G+ EF A+EG + L +++ + L +E V V
Sbjct: 616 HPLTFRLVNPRNGRVVYAGIREFSAEEGHVCLSKFLLHALELDGQLEKDEKEEEVTVTVH 675
Query: 101 NASLAKGSYVKLQPHTKDFLDISNPKAVLETTLR-SYSCLTTGDTIMVPYNNKKYYINVV 159
L KG+YV+L+P + D + KA+LE LR +++ LT G+ + VP +++ ++
Sbjct: 676 AQQLPKGTYVRLRPLEAGY-DPEDWKALLERHLRENFTTLTVGELLTVPSGRGRFFEFLI 734
Query: 160 -----ETKPSTAVSIIETDCEVDFIP 180
E + + I++TD EVD P
Sbjct: 735 DKVAPEEGGGSGICIVDTDLEVDIEP 760
>gi|221131431|ref|XP_002153988.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog, partial
[Hydra magnipapillata]
Length = 171
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 41/56 (73%)
Query: 129 LETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDF 184
LE LRS++CLT GD I + YN+K Y + V+ETKP AVSIIE D +VDF PP+ +
Sbjct: 1 LEKVLRSFACLTKGDLIAIKYNDKDYELLVLETKPQDAVSIIECDMQVDFAPPVGY 56
>gi|124506413|ref|XP_001351804.1| Ubiquitin fusion degradation protein UFD1, putative [Plasmodium
falciparum 3D7]
gi|23504830|emb|CAD51611.1| Ubiquitin fusion degradation protein UFD1, putative [Plasmodium
falciparum 3D7]
Length = 700
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 86/160 (53%), Gaps = 14/160 (8%)
Query: 28 ENGDKIVMPPSALDRLA---YLH-IEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPY 83
++ DKI++P S L L Y + +E+P F + N +T+ V+EF ++EG+I++
Sbjct: 80 DHSDKIILPVSILKTLEKGNYKNEVEFPYTFSIKNVQNNYITHACVLEFSSNEGIIFVSD 139
Query: 84 WMMENMLL---QEGDI--VEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLR-SYS 137
+ EN+ L Q I V + L+K ++KL + DI K +LE L +YS
Sbjct: 140 NIKENLGLNKPQNSSIARVLITYCILSKCDFIKLDSLNNNINDIKYMKNLLENELSLNYS 199
Query: 138 CLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVD 177
LT GD I + N+ +YI+ E +P AVS+I TD VD
Sbjct: 200 TLTLGDYIHI--NHLNFYIS--ELEPDNAVSLINTDINVD 235
>gi|302668303|ref|XP_003025724.1| hypothetical protein TRV_00095 [Trichophyton verrucosum HKI 0517]
gi|291189850|gb|EFE45113.1| hypothetical protein TRV_00095 [Trichophyton verrucosum HKI 0517]
Length = 761
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 88/168 (52%), Gaps = 21/168 (12%)
Query: 50 YPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDI------------- 96
+P+ F L N GRV + G+ EF AD+ + L ++ E++ +++
Sbjct: 74 HPLTFRLVNPINGRVVHSGIREFSADDNEVSLSPFLRESLGIEDHSFDVELDATQRDPLP 133
Query: 97 -VEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLR-SYSCLTTGDTIMVPYNNK-- 152
+ V A L KGSYV+L+P + D+ + KA+LE LR +Y+ L+ G+ + V N
Sbjct: 134 TITVHAAQLPKGSYVRLRPLEAGY-DVEDWKALLERQLRDNYTTLSVGEVLTVVANRSET 192
Query: 153 -KYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEKPSSSSLSNRT 199
++ I+ V+ + A+ I++TD EVD I P+D + + L+ +T
Sbjct: 193 MQFLIDEVQPE-GNAICIVDTDLEVD-IEPMDEDQARESLKRRLAKKT 238
>gi|452839282|gb|EME41221.1| hypothetical protein DOTSEDRAFT_73591 [Dothistroma septosporum
NZE10]
Length = 794
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 96/220 (43%), Gaps = 72/220 (32%)
Query: 30 GDKIVMPPSALDRL----------------------------AYLHIE-----------Y 50
GDKI++PPSAL++L AY E Y
Sbjct: 28 GDKILLPPSALEQLLSASSNAAAESAQRDLPQYDPYNSSTFSAYRQAESQYQDQRQQLPY 87
Query: 51 PMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENM------LLQEGDIVEVKNA-- 102
P+ F L N +GRV Y G+ EF A E I +++E++ L Q D++E+ +
Sbjct: 88 PLTFRLVNPESGRVVYAGIREFSAGESEIVASPFLLESLGLRAEDLAQHEDVMEIDDVQE 147
Query: 103 ----------------SLAKGSYVKLQPHTKDFLDISNPKAVLETTLRS-YSCLTTGDTI 145
L KG++VKL+P + D + KA+LE LRS Y+ LTTG+ +
Sbjct: 148 KEKPARSGPVITVHAKQLPKGTFVKLRPLEAGY-DPEDWKALLEQHLRSNYTTLTTGEVL 206
Query: 146 MVPYNN------KKYYINVVETKPST-AVSIIETDCEVDF 178
++P +++ V KP + +++TD EVD
Sbjct: 207 VMPGGRGVGGKKEEFRFLVDGFKPEVDGICVVDTDLEVDI 246
>gi|302507672|ref|XP_003015797.1| hypothetical protein ARB_06109 [Arthroderma benhamiae CBS 112371]
gi|291179365|gb|EFE35152.1| hypothetical protein ARB_06109 [Arthroderma benhamiae CBS 112371]
Length = 761
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 33/194 (17%)
Query: 50 YPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDI------------- 96
+P+ F L N GRV + G+ EF AD+ + L ++ E++ +++
Sbjct: 74 HPLTFRLVNPINGRVVHSGIREFSADDNEVSLSPFLRESLGIEDHSFDVELDATQTDALP 133
Query: 97 -VEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLR-SYSCLTTGDTIMVPYNNK-- 152
+ V A L KGSYV+L+P + D+ + KA+LE LR +Y+ L+ G+ + V N
Sbjct: 134 TITVHAAQLPKGSYVRLRPLEAGY-DVEDWKALLERQLRDNYTTLSVGEVLTVVANRSET 192
Query: 153 -KYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEKPSSSSLSNRTLPEVKEEPPLDF 211
++ I+ V+ + A+ I++TD EVD I P+D + + L+ +T
Sbjct: 193 MQFLIDKVQPE-GNAICIVDTDLEVD-IEPMDEDQARESLKRRLAKKT------------ 238
Query: 212 KGPEKPSSSSLSNR 225
+ PE + SS+ +
Sbjct: 239 RAPENGAQSSIGGK 252
>gi|398408713|ref|XP_003855822.1| hypothetical protein MYCGRDRAFT_37296 [Zymoseptoria tritici IPO323]
gi|339475706|gb|EGP90798.1| hypothetical protein MYCGRDRAFT_37296 [Zymoseptoria tritici IPO323]
Length = 801
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 65/213 (30%)
Query: 30 GDKIVMPPSALDRL----------------------------AYLHIE-----------Y 50
GDKI++PPSAL+ L Y E Y
Sbjct: 42 GDKILLPPSALEALLSAASNLSADIVRRDLPAFDPYNSSSYSTYRAAEAQFQDQKQSLPY 101
Query: 51 PMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQE----------------G 94
P+ F L N GRV Y G+ EF A++G + L ++ + +++ G
Sbjct: 102 PLTFRLVNPGNGRVVYAGIREFSAEDGQVGLSSFLRGALGVEDDNAEKVVVDGEEKEERG 161
Query: 95 DIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLR-SYSCLTTGDTIMVP----Y 149
++ + L KG++VKL+P + D + KA+LE LR +Y+ LT G+ ++VP
Sbjct: 162 PMITIHAKQLPKGTFVKLRPLEPGY-DPDDWKALLEQHLRQNYTTLTNGEVLVVPGGRAS 220
Query: 150 NNKK----YYINVVETKPSTAVSIIETDCEVDF 178
N KK + I+ + + + AV +++TD EVD
Sbjct: 221 NGKKEEFRFLIDGFKPEGADAVCVVDTDLEVDI 253
>gi|296818223|ref|XP_002849448.1| ubiquitin fusion degradation protein 1 [Arthroderma otae CBS
113480]
gi|238839901|gb|EEQ29563.1| ubiquitin fusion degradation protein 1 [Arthroderma otae CBS
113480]
Length = 760
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 83/152 (54%), Gaps = 21/152 (13%)
Query: 50 YPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDI------------- 96
+P+ F L N GR + G+ EF ADE + L ++ E++ ++ ++
Sbjct: 74 HPLTFRLVNPLNGRAVHSGIREFSADENEVSLSPFIRESLGIEHLNLDTGSGTPPPNTLP 133
Query: 97 -VEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLR-SYSCLTTGDTIMVPYNNK-- 152
V V+ L KGSYV+L+P + D+ + KA+LE LR +Y+ LT G+ + V N K
Sbjct: 134 TVTVQAVQLPKGSYVRLRPLEAGY-DVEDWKALLERQLRDNYTTLTVGEVLPVLANRKET 192
Query: 153 -KYYINVVETKPSTAVSIIETDCEVDFIPPLD 183
++ I+ V+ + A+ I++TD EVD I P+D
Sbjct: 193 MQFLIDKVQPE-GNAICIVDTDLEVD-IEPMD 222
>gi|326484692|gb|EGE08702.1| ubiquitin fusion degradation protein 1 [Trichophyton equinum CBS
127.97]
Length = 762
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 96/193 (49%), Gaps = 31/193 (16%)
Query: 50 YPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDI------------- 96
+P+ F L N GRV + G+ EF AD+ + L ++ E++ +++ +
Sbjct: 74 HPLTFRLVNPINGRVVHSGIREFSADDNEVSLSPFLRESLGIEDHNFDVEPDATQTDTLP 133
Query: 97 -VEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLR-SYSCLTTGDTIMVPYNNKKY 154
+ V A L KGSYV+L+P + D+ + KA+LE LR +Y+ L+ G+ + V N +
Sbjct: 134 TITVHVAQLPKGSYVRLRPLEAGY-DVEDWKALLERQLRDNYTTLSVGEVLTVVANRSET 192
Query: 155 YINVVE-TKP-STAVSIIETDCEVDFIPPLDFKEPEKPSSSSLSNRTLPEVKEEPPLDFK 212
+++ +P A+ I++TD EVD I P+D + + L+ +T +
Sbjct: 193 MQLLIDKVQPEGNAICIVDTDLEVD-IEPMDEDQARESLKRRLAKKT------------R 239
Query: 213 GPEKPSSSSLSNR 225
PE + SS+ +
Sbjct: 240 APENGAQSSIGGK 252
>gi|326475028|gb|EGD99037.1| ubiquitin fusion degradation protein [Trichophyton tonsurans CBS
112818]
Length = 762
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 96/193 (49%), Gaps = 31/193 (16%)
Query: 50 YPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDI------------- 96
+P+ F L N GRV + G+ EF AD+ + L ++ E++ +++ +
Sbjct: 74 HPLTFRLVNPINGRVVHSGIREFSADDNEVSLSPFLRESLGIEDHNFDVEPDATQTDTLP 133
Query: 97 -VEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLR-SYSCLTTGDTIMVPYNNKKY 154
+ V A L KGSYV+L+P + D+ + KA+LE LR +Y+ L+ G+ + V N +
Sbjct: 134 TITVHVAQLPKGSYVRLRPLEAGY-DVEDWKALLERQLRDNYTTLSVGEVLTVVANRSET 192
Query: 155 YINVVE-TKP-STAVSIIETDCEVDFIPPLDFKEPEKPSSSSLSNRTLPEVKEEPPLDFK 212
+++ +P A+ I++TD EVD I P+D + + L+ +T +
Sbjct: 193 MQLLIDKVQPEGNAICIVDTDLEVD-IEPMDEDQARESLKRRLAKKT------------R 239
Query: 213 GPEKPSSSSLSNR 225
PE + SS+ +
Sbjct: 240 APENGAQSSIGGK 252
>gi|449296937|gb|EMC92956.1| hypothetical protein BAUCODRAFT_37870 [Baudoinia compniacensis UAMH
10762]
Length = 791
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 90/218 (41%), Gaps = 70/218 (32%)
Query: 30 GDKIVMPPSALDRL----------------------------AYLHIE-----------Y 50
GDKI++PPSAL+ L AY E Y
Sbjct: 26 GDKILLPPSALEALLSASSNRAAENARRDLPAYDPYNSATYSAYRQAESQYQDQKQQLPY 85
Query: 51 PMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGD--------------- 95
P+ F L N +GRV Y G+ EF A+EG + L ++ E + L E
Sbjct: 86 PLTFRLVNPESGRVVYAGIREFSAEEGEVVLSPFLRETLGLSEQQHESKEASMTVDGEEG 145
Query: 96 -------IVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLR-SYSCLTTGDTIMV 147
+ V L KG++VKL+P + D + KA+LE LR +Y+ LT G ++V
Sbjct: 146 VNGVHRPTITVHARQLDKGTFVKLRPLEAGY-DPEDWKALLEQYLRQNYTTLTNGAVLIV 204
Query: 148 PYNN------KKYYINVVETKPST-AVSIIETDCEVDF 178
P +++ V KP V I++TD EVD
Sbjct: 205 PGGRGMGGKKEEFRFLVDGFKPDVDGVCIVDTDLEVDI 242
>gi|340939549|gb|EGS20171.1| hypothetical protein CTHT_0046790 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 748
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 91/204 (44%), Gaps = 51/204 (25%)
Query: 29 NGDKIVMPPSALDRLAY--------LH-------------------------IEYPMLFE 55
GDKI++P SAL++L +H + +P++F+
Sbjct: 26 QGDKILLPQSALEQLLAASSSSAPGMHSFTAFDSHNPYSVAGRRQFRDNDRQLPHPLMFQ 85
Query: 56 LSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVE-------------VKNA 102
L N G Y G+ EF ADEG + L +++ + + E DI E V+
Sbjct: 86 LINQKNGNTVYAGIREFSADEGEVALSPHLLDALGICESDIAEVSAGRTEDGARIVVRAK 145
Query: 103 SLAKGSYVKLQPHTKDFLDISNPKAVLETTLR-SYSCLTTGDTIMVP-YNNKKYYINVVE 160
L KG YV+L+P + D + + +LE LR SY+ LT G + V +++
Sbjct: 146 QLPKGEYVRLRPMEAGY-DPDDWRPLLERQLRSSYTTLTKGSILTVQGAKGEEFRFLTDR 204
Query: 161 TKP-STAVSIIETDCEVDFIPPLD 183
+P + +++TD EVD I PLD
Sbjct: 205 FRPEGDGICVVDTDLEVD-IEPLD 227
>gi|315041507|ref|XP_003170130.1| ubiquitin fusion degradation protein 1 [Arthroderma gypseum CBS
118893]
gi|311345164|gb|EFR04367.1| ubiquitin fusion degradation protein 1 [Arthroderma gypseum CBS
118893]
Length = 760
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 88/167 (52%), Gaps = 19/167 (11%)
Query: 50 YPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEG--DI----------- 96
+P+ F L N GRV + G+ EF ADE + L ++ E++ +++ DI
Sbjct: 74 HPLTFRLVNPINGRVVHSGIREFSADENEVSLSPFLRESLGIEDSSFDIEPDSTQTETQP 133
Query: 97 -VEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLR-SYSCLTTGDTIMVPYNNKKY 154
+ V A L KGSYV+L+P + D+ + KA+LE LR +Y+ L+ G+ + V + +
Sbjct: 134 TITVHVAQLPKGSYVRLRPLEAGY-DVEDWKALLERQLRDNYTTLSVGEVLTVTASRSET 192
Query: 155 YINVVE-TKPS-TAVSIIETDCEVDFIPPLDFKEPEKPSSSSLSNRT 199
+V+ +P A+ I++TD EVD I P+D + + L+ T
Sbjct: 193 MQFLVDKVQPDGKAICIVDTDLEVD-IEPMDEDQARESLEKRLARHT 238
>gi|150866369|ref|XP_001385946.2| hypothetical protein PICST_61783 [Scheffersomyces stipitis CBS
6054]
gi|149387625|gb|ABN67917.2| ubiquitin fusion degradation protein [Scheffersomyces stipitis CBS
6054]
Length = 717
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 97/167 (58%), Gaps = 16/167 (9%)
Query: 30 GDKIVMPPSALDRLAYL----HIEYPMLFELSNTSAGRVTYCGVMEFIA--DEGLIYLPY 83
DK ++P S L R+ + + +P++F+++++ + Y GV EF A DE ++ LP
Sbjct: 21 SDKAILPASVLSRIVDIIPESELPHPLIFKITSSESLGSCYIGVREFSAPEDETVV-LPD 79
Query: 84 WMMENMLLQEGDIVEVK-NASLAKGSYVKLQPHTKDFLDISNPKAVLETTL-RSYSCLTT 141
W+ +L E VE++ +S++K + +KL+P + + +I+N K LE L + Y+ LT+
Sbjct: 80 WIFTKLLEPESVTVELQLKSSISKATSLKLKP-LQLYSNITNWKYFLENKLTQYYTTLTS 138
Query: 142 GDTIMVPYNNKKYYINVVET-----KPSTAVSIIETDCEVDFIPPLD 183
+T+++ +N +Y + + E KP TA SII+TD +D +P D
Sbjct: 139 KETLVIEDDNLRYELYIEEINGEAHKPVTA-SIIDTDIVLDVVPLND 184
>gi|302830264|ref|XP_002946698.1| hypothetical protein VOLCADRAFT_86921 [Volvox carteri f.
nagariensis]
gi|300267742|gb|EFJ51924.1| hypothetical protein VOLCADRAFT_86921 [Volvox carteri f.
nagariensis]
Length = 418
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 68/128 (53%), Gaps = 6/128 (4%)
Query: 65 TYCGVMEFIADEGLIYLPYWMMENML----LQEGDIVEVKNASLAKGSYVKLQPHTKDFL 120
T+ GV+EF A EG + LP ++ ++ Q V V L KG+YV+LQP + F
Sbjct: 107 THAGVLEFTAPEGTVLLPRKVVHSLYGSLDAQPSGTVIVSYRRLEKGTYVRLQPMSHGFH 166
Query: 121 DI--SNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDF 178
+ + LE L +S L+ GD + V + + + + V E +PS AVS+I+ D D
Sbjct: 167 EALGEGLRETLEEELLGHSTLSEGDWVTVVHGGRDWPLRVQELQPSNAVSVIDVDIAADV 226
Query: 179 IPPLDFKE 186
+P L+ +E
Sbjct: 227 VPSLEAEE 234
>gi|308801301|ref|XP_003077964.1| Ubiquitin fusion-degradation protein (ISS) [Ostreococcus tauri]
gi|116056415|emb|CAL52704.1| Ubiquitin fusion-degradation protein (ISS) [Ostreococcus tauri]
Length = 476
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 60 SAGRVTYCGVMEFIA-DEGLIYLPYWMMENMLLQEGDI---VEVKNASLAKGSYVKLQPH 115
S GR + GV+++ G+I +P M+ ++ L+E D+ V V A+L + + L+P
Sbjct: 74 SNGRTCHVGVLDYGGVSTGMIGIPRPMLRSLGLRETDVGAEVRVTYAALPSATRMTLKPK 133
Query: 116 TKDFLDI----SNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST---AVS 168
T +F N + +LE T+ S T GD I V + Y + VV +P AVS
Sbjct: 134 TNEFARACEAEENVRDILERTMMGRSAATVGDEIEVTVRDATYDLRVVRVEPDDGHGAVS 193
Query: 169 IIETDCEVDFIPPLDFKE 186
++ETD EVD P ++ E
Sbjct: 194 LLETDVEVDLEPSDEYDE 211
>gi|254565167|ref|XP_002489694.1| Protein that interacts with Cdc48p and Npl4p, involved in
recognition of polyubiquitinated proteins [Komagataella
pastoris GS115]
gi|238029490|emb|CAY67413.1| Protein that interacts with Cdc48p and Npl4p, involved in
recognition of polyubiquitinated proteins [Komagataella
pastoris GS115]
gi|328350113|emb|CCA36513.1| Zinc finger protein 347 [Komagataella pastoris CBS 7435]
Length = 677
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 96/170 (56%), Gaps = 20/170 (11%)
Query: 30 GDKIVMPPSALD-------RLAYLHIEYPMLFEL----SNTSAGRVTYCGVMEFIADEGL 78
D++ +PPS L+ RL+ + +P++F L SN++ ++ GV EF + EG
Sbjct: 27 SDRVALPPSILESLVNQQQRLSIASLPHPLIFRLQAEKSNSAVN--SFVGVKEFTSQEGT 84
Query: 79 IYLPYWMMENMLLQEGDIVEVKNASLA----KGSYVKLQPHTKDFLDISNPKAVLETTL- 133
I LP ++ + ++ + + + N +LA KG+ + L+P + + +I + K LE L
Sbjct: 85 ILLPEFIYDKLVSPDNNDSTI-NITLASDIPKGTSIALKP-LELYPEIKDWKYFLEAKLI 142
Query: 134 RSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLD 183
+SY+ L+T DT+ + +K Y + V + +P++A+ +I+TD ++ +P D
Sbjct: 143 KSYTTLSTNDTVCISEKDKVYKLLVEQAEPTSAICLIDTDIDLSIVPLDD 192
>gi|389584086|dbj|GAB66819.1| ubiquitin fusion degradation protein UFD1 [Plasmodium cynomolgi
strain B]
Length = 684
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 92/177 (51%), Gaps = 12/177 (6%)
Query: 29 NGDKIVMPPSALDRLA----YLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYW 84
+ DK+++P S L L +E+P F L N +T+ V+EF ++EG+I++
Sbjct: 80 HSDKVILPVSILKTLEKGFYRSEVEFPYTFSLKNVQNNYITHVCVLEFSSNEGIIHVSEN 139
Query: 85 MMENM-LLQEGDIVE--VKNASLAKGSYVKLQPHTKDFLDISNPK-AVLETTLRSYSCLT 140
+ EN+ + Q IV V A++ K ++K + ++ +I K + +YS LT
Sbjct: 140 VKENLGIKQNSGIVRLLVTYANIPKCDFIKFESLNENTSNIKFMKNLLQNELNLNYSTLT 199
Query: 141 TGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEKPSSSSLSN 197
GD + + NN +YI+ E +P AVS+I TD VD + E ++ SS+ L++
Sbjct: 200 LGDYVHI--NNLSFYIS--ELEPDNAVSLINTDITVDICERKNVGEKKEESSNCLND 252
>gi|327298339|ref|XP_003233863.1| ubiquitin fusion degradation protein [Trichophyton rubrum CBS
118892]
gi|326464041|gb|EGD89494.1| ubiquitin fusion degradation protein [Trichophyton rubrum CBS
118892]
Length = 761
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 33/194 (17%)
Query: 50 YPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLL------------QEGDI- 96
+P+ F L N GRV + G+ EF A++ + L ++ E++ + Q G +
Sbjct: 74 HPLTFRLVNPINGRVVHSGIREFSANDNEVSLSSFLRESLGIEDYSFDVEPDATQTGTLP 133
Query: 97 -VEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLR-SYSCLTTGDTIMVPYNNK-- 152
+ V L KGSYV+L+P + D+ + KA+LE LR +Y+ L+ G+ + V N
Sbjct: 134 AITVHITQLPKGSYVRLRPLEAGY-DVEDWKALLERQLRDNYTTLSVGEVLTVVANRSET 192
Query: 153 -KYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEKPSSSSLSNRTLPEVKEEPPLDF 211
++ I+ V+ + A+ I++TD EVD I P+D + + L+ +T
Sbjct: 193 MQFLIDKVQPE-GNAICIVDTDLEVD-IEPMDEDQARETLKRRLAKKT------------ 238
Query: 212 KGPEKPSSSSLSNR 225
+ PE + SS+ +
Sbjct: 239 RAPENGAQSSIGGK 252
>gi|70952282|ref|XP_745320.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56525605|emb|CAH79201.1| hypothetical protein PC105816.00.0 [Plasmodium chabaudi chabaudi]
Length = 98
Score = 67.0 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 40/54 (74%)
Query: 34 VMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMME 87
++P +AL+ LA HI +PMLFE+SN + T+ GV+EFI+DEG ++PYW+ E
Sbjct: 41 ILPQTALNALARRHISWPMLFEVSNPYTEKRTHSGVLEFISDEGTCHMPYWVKE 94
>gi|83273514|ref|XP_729432.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23487210|gb|EAA20997.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 98
Score = 67.0 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 40/54 (74%)
Query: 34 VMPPSALDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMME 87
++P +AL+ LA HI +PMLFE+SN + T+ GV+EFI+DEG ++PYW+ E
Sbjct: 41 ILPQTALNALARRHISWPMLFEVSNPYTEKRTHSGVLEFISDEGTCHMPYWVKE 94
>gi|84997834|ref|XP_953638.1| ubiquitin-fusion degradation pathway component, UFD1 [Theileria
annulata]
gi|65304635|emb|CAI72960.1| ubiquitin-fusion degradation pathway component, UFD1 homologue,
putative [Theileria annulata]
Length = 321
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 60/118 (50%), Gaps = 5/118 (4%)
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
C +EF DE IYLP W++ N+ L+ DIV V+ L+ + V+L+ K F D+ N K
Sbjct: 204 CSAIEFRTDENYIYLPKWIINNLKLKPYDIVLVEPVKLSDCTNVELKCLEKGFYDLKNVK 263
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVV-----ETKPSTAVSIIETDCEVDFI 179
+LE L+ YS LT I + + K Y VV E + VSI + D + +
Sbjct: 264 KILEDRLKYYSTLTINSVIPITVDKKTYNFQVVKLDTAEYQNVNHVSIQDVDINLKLL 321
>gi|320588058|gb|EFX00533.1| ubiquitin fusion degradation protein [Grosmannia clavigera kw1407]
Length = 742
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 97/188 (51%), Gaps = 32/188 (17%)
Query: 29 NGDKIVMPPSALDRL------AYLH----------IEYPMLFELSNTSAGRVTYCGVMEF 72
GDKI++PPSAL L A L + P+ F L NT+ R + G+ EF
Sbjct: 28 QGDKILLPPSALQTLLDAAARAQLQAGSSSNSSGDLPQPLTFRLVNTANQRAVFAGIREF 87
Query: 73 IADEGLIYLPYWMMENMLLQE----GD------IVEVKNASLAKGSYVKLQPHTKDFLDI 122
ADEG + L ++ + +++ GD ++ V A L KG++V L+P + +
Sbjct: 88 SADEGHVVLSPYLRAALGVEDDEDGGDNGNKNHLIAVAFAPLPKGTFVHLRPLEAGY-NP 146
Query: 123 SNPKAVLETTLR-SYSCLTTGDTIMV--PYNNKKYYINVVETKPST-AVSIIETDCEVDF 178
++ +A+LE LR +++ LT + V ++ +++ + +P+T + +++TD EVD
Sbjct: 147 ADWRALLERQLREAFTTLTRNALLTVRGSTADETFHLRIDGFQPATDGICVVDTDLEVD- 205
Query: 179 IPPLDFKE 186
I LD ++
Sbjct: 206 IEALDEQQ 213
>gi|399217646|emb|CCF74533.1| unnamed protein product [Babesia microti strain RI]
Length = 283
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 62/125 (49%), Gaps = 8/125 (6%)
Query: 63 RVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDI 122
RVT GV++F A +G I+LP WM ++ ++E DIV V L+ V+L+P + +
Sbjct: 154 RVT-IGVLDFRAPDGFIFLPPWMFSSLNIKERDIVRVHKTRLSDAISVRLRPTSGSIFSV 212
Query: 123 SNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPST-------AVSIIETDCE 175
+ K+ LE L+ YS LT TI + N N +T A SI + D
Sbjct: 213 EDQKSFLEKRLKYYSNLTKNTTISILDQNSNNVFNFKVVNIATENKENVEAASIQDVDVA 272
Query: 176 VDFIP 180
VD +P
Sbjct: 273 VDLLP 277
>gi|221056851|ref|XP_002259563.1| Ubiquitin fusion degradation protein UFD1 [Plasmodium knowlesi
strain H]
gi|193809635|emb|CAQ40336.1| Ubiquitin fusion degradation protein UFD1,putative [Plasmodium
knowlesi strain H]
Length = 661
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 92/177 (51%), Gaps = 12/177 (6%)
Query: 29 NGDKIVMPPSALDRLAY----LHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYW 84
+ DK+++P S L L +E+P F L N +T+ V+EF ++EG+I++
Sbjct: 80 HSDKVILPVSILKTLEKGFYKSEVEFPYTFSLKNVQNNYITHVCVLEFSSNEGIIHVSEN 139
Query: 85 MMENM-LLQEGDIVE--VKNASLAKGSYVKLQPHTKDFLDISNPK-AVLETTLRSYSCLT 140
+ EN+ + Q+ IV V A++ K ++K + ++ +I K + +YS LT
Sbjct: 140 VKENLGIKQKSGIVRLLVTYANIPKCDFIKFESLNENTRNIKFMKNLLQNELNLNYSTLT 199
Query: 141 TGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEKPSSSSLSN 197
GD + + NN +YI+ E +P AVS+I TD VD + E + SS+ L++
Sbjct: 200 LGDYVHI--NNLSFYIS--ELEPDNAVSLINTDITVDICERKNATEKKDESSNCLND 252
>gi|448536871|ref|XP_003871215.1| hypothetical protein CORT_0G04130 [Candida orthopsilosis Co 90-125]
gi|380355571|emb|CCG25090.1| hypothetical protein CORT_0G04130 [Candida orthopsilosis]
Length = 661
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 84/159 (52%), Gaps = 9/159 (5%)
Query: 31 DKIVMPPSALDRLAYLHIE--YPMLFELSNTSAGRV-TYCGVMEFIADEGLIYLPYWMME 87
DK +PP+ L ++ +E +P +F+++N S + TY GV EFI + G I LP +
Sbjct: 21 DKANLPPTVLSQIINEGVELPHPFVFKITNDSDPFIYTYIGVKEFIGEPGEIDLPSLVTA 80
Query: 88 NMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDTIMV 147
+ I++++ + K + +KL+P F ISN K LE+ L Y+ + G+TI++
Sbjct: 81 KLQNPTTVILDLQR-DIPKATSLKLKPSL--FYPISNWKFFLESRLTHYTLVEKGNTIII 137
Query: 148 PYNNKKYYINVVETKPS---TAVSIIETDCEVDFIPPLD 183
KY + V + S T SII+TD VD +P D
Sbjct: 138 EDGGLKYELQVEQINDSDSVTVASIIDTDVTVDMVPLND 176
>gi|259483706|tpe|CBF79315.1| TPA: ubiquitin fusion degradation protein (Ufd1), putative
(AFU_orthologue; AFUA_4G04640) [Aspergillus nidulans
FGSC A4]
Length = 756
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 78/140 (55%), Gaps = 12/140 (8%)
Query: 50 YPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENM-LLQEGD-----IVEVKNAS 103
+P+ F L NT RV Y G+ EF A E I L + E + + QEG IV V
Sbjct: 89 HPLTFRLVNTQNSRVIYAGIREFSARENEIGLSASLREALDISQEGGDADAPIVTVHAEQ 148
Query: 104 LAKGSYVKLQPHTKDFLDISNPKAVLETTLRS-YSCLTTGDTIMVPYNNK---KYYINVV 159
L KG+YV+L+P + D + KA+LE LRS Y+ LTTG+T+ VP + K+ ++ V
Sbjct: 149 LPKGTYVRLRPLEAGY-DTDDWKALLERHLRSNYTTLTTGETLTVPRGQEESFKFLVDKV 207
Query: 160 ETKPSTAVSIIETDCEVDFI 179
E + + +++TD EVD +
Sbjct: 208 EPQ-GEGICVVDTDLEVDIV 226
>gi|212535932|ref|XP_002148122.1| ubiquitin fusion degradation protein (Ufd1), putative [Talaromyces
marneffei ATCC 18224]
gi|210070521|gb|EEA24611.1| ubiquitin fusion degradation protein (Ufd1), putative [Talaromyces
marneffei ATCC 18224]
Length = 766
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 75/146 (51%), Gaps = 16/146 (10%)
Query: 50 YPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGD-------IVEVKNA 102
+P+ F+L N G+V Y G+ EF A+EG I L ++ +++ ++ V V
Sbjct: 103 HPLTFKLVNPRNGQVVYAGIREFSAEEGHIGLSKFLRQSLGVEAEAEKEQEEVTVTVHAQ 162
Query: 103 SLAKGSYVKLQPHTKDFLDISNPKAVLETTLR-SYSCLTTGDTIMVPYNNKKYYINVVET 161
L KG+YV+L+P + D + KA+LE LR +++ LT G+ + VP + + +++
Sbjct: 163 QLPKGTYVRLRPLEAGY-DPEDWKALLERHLRENFTTLTVGELLTVPSGRGRSFEFLIDK 221
Query: 162 -------KPSTAVSIIETDCEVDFIP 180
+ I++TD EVD P
Sbjct: 222 VAPEGKEGQENGICIVDTDLEVDIEP 247
>gi|402079440|gb|EJT74705.1| hypothetical protein GGTG_08543 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 800
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 87/182 (47%), Gaps = 33/182 (18%)
Query: 30 GDKIVMPPSALDRLA---------------------YLHIEYPMLFELSNTSAGRVTYCG 68
GDKI +P SAL +L + YP++F L N + G+ + G
Sbjct: 62 GDKINLPSSALQQLLDANAATANATAPTRFPSLEQNAHSLPYPLMFRLVNETNGKAVHAG 121
Query: 69 VMEFIADEGLIYLPYWMMENMLLQEGD------IVEVKNASLAKGSYVKLQPHTKDF--L 120
V EF A+EG + L +++ ++ L+ G V+V L KG YV L P +D+
Sbjct: 122 VREFSAEEGHVVLSPFLLASLGLESGSDAESLPRVKVTAHQLPKGHYVGLSP-AQDYAAY 180
Query: 121 DISNPKAVLETTLR-SYSCLTTGDTIMVPYNNKKYYINVVET-KP-STAVSIIETDCEVD 177
D + + +LE LR Y+ L+ G + V + Y +VE+ KP + +I+TD E+D
Sbjct: 181 DPAVLEPLLERELRQGYTTLSVGTILHVRSGLRDKYEFLVESVKPEGDGICVIDTDLELD 240
Query: 178 FI 179
+
Sbjct: 241 LL 242
>gi|452977171|gb|EME76944.1| hypothetical protein MYCFIDRAFT_168973 [Pseudocercospora fijiensis
CIRAD86]
Length = 787
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 95/234 (40%), Gaps = 73/234 (31%)
Query: 17 YPISFIDKPHLENGDKIVMPPSALDRL----------------------------AYLHI 48
Y ++ + H GDKI++PPSAL+ L AY
Sbjct: 13 YTVTAHSRSHPLPGDKILLPPSALEALLSASSNLAAETARRDLPQYDPYNSATYSAYRQA 72
Query: 49 E-----------YPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDI- 96
E YP+ F L + +GRV Y G+ EF A EG + L +++E + L D+
Sbjct: 73 ESQYQDQKQQLPYPLTFRLVHPESGRVVYAGIREFSASEGQVVLSSFLLETLGLSAEDLH 132
Query: 97 ------------------------VEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETT 132
+ V L KG++VKL+P + D + KA+LE
Sbjct: 133 KHEDVMQMDEEEGAPPANGVSGPQLTVHARQLPKGTFVKLRPLEPGY-DPEDWKALLEQH 191
Query: 133 LRS-YSCLTTGD------TIMVPYNNKKYYINVVETKP-STAVSIIETDCEVDF 178
LR+ Y+ LT G+ V ++Y V KP + + +++TD EVD
Sbjct: 192 LRANYTTLTNGEVLVVPGGRGVGGQKEEYRFLVDGFKPEADGICVVDTDLEVDI 245
>gi|326435957|gb|EGD81527.1| hypothetical protein PTSG_02246 [Salpingoeca sp. ATCC 50818]
Length = 720
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 6/154 (3%)
Query: 31 DKIVMPPSALDRLA-YLHIEYPMLFELSNTSAGRV---TYCGVMEFIADEGLIYLPYWMM 86
D+IV+P SAL L + + P+L + + C V F A E +P W++
Sbjct: 23 DRIVLPSSALHELHDRMELGKPLLLRAAVRKISKAEDKVACSVHSFNAPENTAIVPGWLL 82
Query: 87 ENMLLQEGDIVEVKNAS-LAKGSYVKLQPHTKDFLDISNPKAVLETTLR-SYSCLTTGDT 144
+ + L G + ++ L + + + + F + N KAVLE L +Y LT G T
Sbjct: 83 QQLKLSPGSKIWLELVDELPTAEFCRFRVLDEAFFKLQNHKAVLERALEGNYRTLTEGST 142
Query: 145 IMVPYNNKKYYINVVETKPSTAVSIIETDCEVDF 178
I V + Y + V+E P S+I+ D EVD
Sbjct: 143 IRVDHLGIAYKLEVLELLPERQCSLIDADLEVDL 176
>gi|317034875|ref|XP_001400649.2| ubiquitin fusion degradation protein (Ufd1) [Aspergillus niger CBS
513.88]
Length = 745
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 58/208 (27%)
Query: 29 NGDKIVMPPSALDRLAYL------------------------------------------ 46
+GDKI++PPSAL++L
Sbjct: 26 SGDKIILPPSALEQLLAAAPLQEVTSSGPARPYTNTFDPFNPHTFAAESQARERAVDRQQ 85
Query: 47 HIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLL--------QEGD--- 95
+ +P+ F + N RV Y GV EF A E I L ++ + + GD
Sbjct: 86 QLPHPLTFRIVNPQNDRVVYAGVREFSAPENEIGLSTFLRGALGIDGTRQPSPHGGDAAP 145
Query: 96 -IVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLR-SYSCLTTGDTIMVPYN-NK 152
V V L KG+YV+L+P + D N KA+LE LR +Y+ LT+G+ + V N+
Sbjct: 146 TTVTVHAQQLPKGTYVRLRPLEAGY-DPGNWKALLEQQLRDNYTTLTSGEVLTVAGGRNQ 204
Query: 153 KYYINVVETKP-STAVSIIETDCEVDFI 179
+ V + +P + +++TD EVD +
Sbjct: 205 SFQFLVDKVEPHGNGICVVDTDLEVDIV 232
>gi|115388857|ref|XP_001211934.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114196018|gb|EAU37718.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 969
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 80/157 (50%), Gaps = 20/157 (12%)
Query: 39 ALDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVE 98
ALDR H+ +P+ F + N RV Y G+ EF A + + L + + + + + E
Sbjct: 83 ALDR--QHHLPHPLTFRIVNPLNNRVIYAGIREFSATDNEVCLSGVLRDALGIDDARPAE 140
Query: 99 VKNAS------------LAKGSYVKLQPHTKDFLDISNPKAVLETTLR-SYSCLTTGDTI 145
+A+ L KG+YV+L+P + D + KA+LE LR +Y+ LTTG+ +
Sbjct: 141 ADDATGPPPTVTVHAQQLPKGTYVRLRPLEAGY-DPEDWKALLERHLRDNYTTLTTGEVL 199
Query: 146 MVPYNNK---KYYINVVETKPSTAVSIIETDCEVDFI 179
V + ++ ++ VE + + +++TD EVD +
Sbjct: 200 DVSGGREESFRFLVDKVEPE-GDGICVVDTDLEVDIV 235
>gi|440639182|gb|ELR09101.1| hypothetical protein GMDG_03685 [Geomyces destructans 20631-21]
Length = 769
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 66/214 (30%)
Query: 30 GDKIVMPPSALDRL----------------------------------AYLH-----IEY 50
GDKI++PPSAL++L + H + +
Sbjct: 27 GDKILLPPSALEQLLAASQAVPTPQHNAIRAGFDPFNPYSLTAARAEASQWHDTQQQLPH 86
Query: 51 PMLFELSNTSAGRVTYCGVMEFIADEGLIYL---------------------PYWMMENM 89
P+ F L N GRV Y G+ EF A+EG I L P + ++
Sbjct: 87 PLTFRLVNPKNGRVIYAGIREFSAEEGQIGLSPSLLDALGVTTEAVGGVEGEPIDLTDDN 146
Query: 90 LLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLR-SYSCLTTGDTIMVP 148
+ E D + V L KG+YV+L+P + + + K++LE LR +Y+ LT G+ + +P
Sbjct: 147 EVGEVDRIMVHAKQLPKGTYVRLRPLEAGY-NPDDWKSLLERHLRENYTTLTNGEVLKIP 205
Query: 149 YNNKK---YYINVVETKP-STAVSIIETDCEVDF 178
+++ + I + + P A+ +++TD EVD
Sbjct: 206 DTSRRGHTFQILIDKFVPEGDAICVVDTDLEVDI 239
>gi|328769881|gb|EGF79924.1| hypothetical protein BATDEDRAFT_25437 [Batrachochytrium
dendrobatidis JAM81]
Length = 486
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 99/190 (52%), Gaps = 18/190 (9%)
Query: 29 NGDKIVMPPSALDRL-AYLHIEY-PMLF--ELSNTSAGRVTYCGVMEFIADEGLIYLPYW 84
+GD+I +PPS L L +Y + P+ F + + +A T+ V EF A EG + + +
Sbjct: 23 SGDRIQLPPSILSALYSYSDVSLSPLTFMIQFVSDTATNTTHGCVREFTAPEGSVIVSPF 82
Query: 85 MMENMLLQEG------DIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLR-SYS 137
+ + +L ++ + SL K + L P +L I + K +LE+ LR ++S
Sbjct: 83 LAKQLLKSASADSPTDHLLNLTLVSLPKCHFAHLAPLDDTYLQIPDIKYILESHLRQNHS 142
Query: 138 CLTTGDTIMVPYNN--KKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEKPSSSSL 195
LT G+T+ + ++ + + +VE KP++A I+TD EV+ I P+D EK ++
Sbjct: 143 TLTCGETLSITQHSPLRLFQFLIVELKPASACLCIDTDMEVN-IHPVDPILAEK----AV 197
Query: 196 SNRTLPEVKE 205
N+ L +V E
Sbjct: 198 KNKILGQVAE 207
>gi|258577797|ref|XP_002543080.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237903346|gb|EEP77747.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 764
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 60/210 (28%)
Query: 30 GDKIVMPPSALDRL-------------------------AYLH---IEYPMLFELSNTSA 61
GDKI +PPSAL+ + A+ H + +P+ F + N +
Sbjct: 38 GDKICLPPSALEGILAAFPAVSPSRPHSSSVSFSEPDDGAHAHSHELPHPLTFRIVNPAN 97
Query: 62 GRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDI------------------------- 96
GRV Y G++EF A+E + L +++++ +Q D
Sbjct: 98 GRVVYSGILEFSAEESEVSLSPLLLQSLGIQASDFESDSTLPEHERSEPAGSEQGLAPQS 157
Query: 97 ---VEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRS-YSCLTTGDTIMVPYN-N 151
V V L KG+YV+L+P + D + KA+LE +L + ++ L+ G+ + VP N
Sbjct: 158 PPRVTVHVVQLPKGTYVRLRPLEAGY-DTDDWKALLERSLGANFTTLSVGEPLPVPGRPN 216
Query: 152 KKYYINVVETKP-STAVSIIETDCEVDFIP 180
+ + V + P A+ I++TD EVD +P
Sbjct: 217 EVFQFLVDKILPEGNAICIVDTDLEVDIVP 246
>gi|255074459|ref|XP_002500904.1| predicted protein [Micromonas sp. RCC299]
gi|226516167|gb|ACO62162.1| predicted protein [Micromonas sp. RCC299]
Length = 271
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 53/93 (56%), Gaps = 10/93 (10%)
Query: 104 LAKGSYVKLQPHTKDF---LDISNP---KAVLETTLRSYSCLTTGDTIMV-PYNNKKYYI 156
L KG++VKLQP + DF L N + +LE TL LT GD + V + +++Y +
Sbjct: 59 LPKGTWVKLQPRSADFQGELATDNSVDLRELLEATLHRRCALTVGDDVSVRAHGDREYAL 118
Query: 157 NVVETKPSTA---VSIIETDCEVDFIPPLDFKE 186
VVE P A VS++ETD EVD P D+++
Sbjct: 119 RVVEVLPDDADGAVSLVETDVEVDIAPSEDYED 151
>gi|380479265|emb|CCF43122.1| ubiquitin fusion degradation protein, partial [Colletotrichum
higginsianum]
Length = 488
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 66/132 (50%), Gaps = 6/132 (4%)
Query: 51 PMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYV 110
P++F L N G Y G+ EF A+EG I L M+ + L + V V L KG YV
Sbjct: 5 PLMFRLVNQKNGNAVYAGIREFSAEEGEIALGPDMLPDSLPETQPRVTVHAKQLPKGIYV 64
Query: 111 KLQPHTKDFLDISNPKAVLETTLR-SYSCLTTGDTIMVPYNNKKYYINVVETK---PSTA 166
+L+P + D N K++LE LR SY+ LT DT++ K + + K
Sbjct: 65 RLRPLEAGY-DPDNWKSLLERQLRESYTTLTK-DTVLAVRGVKGEHFKFLVDKFLPEGDG 122
Query: 167 VSIIETDCEVDF 178
+ +++TD EVD
Sbjct: 123 ICVVDTDLEVDI 134
>gi|310801479|gb|EFQ36372.1| ubiquitin fusion degradation protein [Glomerella graminicola
M1.001]
Length = 758
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 88/211 (41%), Gaps = 63/211 (29%)
Query: 30 GDKIVMPPSALDRL------------------------------AYLH------IEYPML 53
GDKI++PPSAL++L Y H + P++
Sbjct: 29 GDKILLPPSALEQLLAASPRPPAPANSTFTSYDPFNPYARHHQTQYHHSDSSQQLPNPLM 88
Query: 54 FELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDI----------------- 96
F L N + G + Y G+ EF AD+G I L ++ME + + D
Sbjct: 89 FRLVNQNNGNIVYAGIREFSADDGEIALAPYLMEALGILPTDFGSETSSGEPIDATDDST 148
Query: 97 ------VEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLR-SYSCLTTGDTIMVPY 149
V V L KG+YV+L+P + D + K++LE LR SY+ LT G + V
Sbjct: 149 KHTQPRVTVHANQLPKGTYVRLRPLEAGY-DPDDWKSLLERQLRESYTTLTKGTVLSVRG 207
Query: 150 NNKKYYINVVE--TKPSTAVSIIETDCEVDF 178
+ + +V+ + +++TD EVD
Sbjct: 208 VKGEDFKFLVDKFLPEGDGICVVDTDLEVDI 238
>gi|134081316|emb|CAK41819.1| unnamed protein product [Aspergillus niger]
Length = 775
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 90/219 (41%), Gaps = 69/219 (31%)
Query: 29 NGDKIVMPPSALDRLAYL------------------------------------------ 46
+GDKI++PPSAL++L
Sbjct: 26 SGDKIILPPSALEQLLAAAPLQEVTSSGPARPYTNTFDPFNPHTFAAESQARERAVDRQQ 85
Query: 47 HIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQ-------------E 93
+ +P+ F + N RV Y GV EF A E I L ++ + + +
Sbjct: 86 QLPHPLTFRIVNPQNDRVVYAGVREFSAPENEIGLSTFLRGALGIDGTRQPSPHGGDGND 145
Query: 94 GDI----------VEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLR-SYSCLTTG 142
GD+ V V L KG+YV+L+P + D N KA+LE LR +Y+ LT+G
Sbjct: 146 GDVTDNAPAAPTTVTVHAQQLPKGTYVRLRPLEAGY-DPGNWKALLEQQLRDNYTTLTSG 204
Query: 143 DTIMVPYN-NKKYYINVVETKP-STAVSIIETDCEVDFI 179
+ + V N+ + V + +P + +++TD EVD +
Sbjct: 205 EVLTVAGGRNQSFQFLVDKVEPHGNGICVVDTDLEVDIV 243
>gi|116201739|ref|XP_001226681.1| hypothetical protein CHGG_08754 [Chaetomium globosum CBS 148.51]
gi|88177272|gb|EAQ84740.1| hypothetical protein CHGG_08754 [Chaetomium globosum CBS 148.51]
Length = 765
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 89/216 (41%), Gaps = 66/216 (30%)
Query: 29 NGDKIVMPPSALDRL-------------------------AYLHIE--------YPMLFE 55
GDKIV+P SAL++L A H + +P++F+
Sbjct: 22 RGDKIVLPQSALEQLLASSTGTNGWKSTFIFPASEPSNPYAAAHAQQERPQELPHPLMFQ 81
Query: 56 LSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVE----------------- 98
L+N + G+ Y G+ EF A EG + L + E + +QE DI E
Sbjct: 82 LANPATGKTVYAGIREFSASEGEVALSPHIREALGIQELDIQEGPQEDDRISDSRSDKGD 141
Query: 99 ----------VKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLR-SYSCLTTGDTIMV 147
VK L G+YV+L+P + + + K +LE LR +++ LT G TI +
Sbjct: 142 ENTDEGLRITVKATQLPAGTYVRLRPLEAGY-NPDDWKPLLERQLRGNFTTLTKGSTISI 200
Query: 148 PYNNKKYYINVVETK---PSTAVSIIETDCEVDFIP 180
K ++ K + +I+TD E D P
Sbjct: 201 -QGTKGEEFRLLADKFLPEGDGICVIDTDLETDIEP 235
>gi|345563376|gb|EGX46377.1| hypothetical protein AOL_s00109g135 [Arthrobotrys oligospora ATCC
24927]
Length = 749
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 101/205 (49%), Gaps = 37/205 (18%)
Query: 44 AYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENM-------------- 89
A + +P+ F ++N GRV Y G+ EF A+EG + L ++ E +
Sbjct: 87 ARQQLPHPLTFRVTNLITGRVAYAGIREFSAEEGQVVLSNFLREGLALLNLGQQEQQEQH 146
Query: 90 ----LLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTL-RSYSCLTTGDT 144
LL+ G ++V+ ++ KG++ +L+P + + P +LE L ++++ L +
Sbjct: 147 GDDGLLEAG--IKVEAVNVPKGTFARLRPLDAGYEEDWKP--ILENHLQKNFTTLALNNI 202
Query: 145 IMVPY------NNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEKPSSSSLSNR 198
+ +P + K+ I+ ++ + + A+ I++TD EVD I PL+ E+ + SL R
Sbjct: 203 LAIPRLSHQPGKDFKFLIDQLKPEGTEAICIVDTDLEVD-IEPLN----EEQAKESLRQR 257
Query: 199 TLPEVKEEP---PLDFKGPEKPSSS 220
L + E ++ GP++ + S
Sbjct: 258 ELRKKAESSSGGQINIDGPKEGTIS 282
>gi|225681377|gb|EEH19661.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 794
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 95/232 (40%), Gaps = 80/232 (34%)
Query: 30 GDKIVMPPSALDRLAYL-----------------------------------------HI 48
GDKI++PPSAL++L +
Sbjct: 27 GDKIILPPSALEQLLAAAPISSTSPTQNHSLTPQFDPFNPHTFVAERRARELAAERQHRL 86
Query: 49 EYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGD------------- 95
P+ F + N S GR+ + G+ EF A E + L ++ E++ L++ D
Sbjct: 87 PQPLTFRIVNPSNGRIVHAGIREFSAQENEVGLSAFLRESLGLEDVDFQPAAADTLQEDS 146
Query: 96 ---------------------IVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLR 134
+V + L KGSYV+L+P + D + KA+LE LR
Sbjct: 147 LSNMDIAEFGGGGRATISSGPLVTIHAKQLPKGSYVRLRPLEAGY-DPEDWKALLERYLR 205
Query: 135 -SYSCLTTGDTIMVPYN-NKKYYINVVETKP-STAVSIIETDCEVDFIPPLD 183
+++ LT G+ ++VP N+ + V + +P + I++TD EVD I LD
Sbjct: 206 DNFTTLTLGEFLLVPGGRNETFRFLVDKVEPQGDGICIVDTDLEVD-IEALD 256
>gi|295671841|ref|XP_002796467.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283447|gb|EEH39013.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 798
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 92/228 (40%), Gaps = 80/228 (35%)
Query: 30 GDKIVMPPSALDRLAYL-----------------------------------------HI 48
GDKI++PPSAL++L +
Sbjct: 27 GDKIILPPSALEQLLAAAPISSTSPAQNNSLTPQFDPFNPHTFVAERRARELAAERQHRL 86
Query: 49 EYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGD------------- 95
P+ F + N S GR+ + G+ EF A E + L ++ E++ L++ D
Sbjct: 87 PQPLTFRIVNPSNGRIVHAGIREFSAQENEVGLSAFLRESLGLEDVDFQPAAAADTSQED 146
Query: 96 ----------------------IVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTL 133
+V + L KGSYV+L+P + D + KA+LE L
Sbjct: 147 SLSNTDIAESGGGGRATIPSGPLVTIHAKQLPKGSYVRLRPLEAGY-DPEDWKALLERYL 205
Query: 134 R-SYSCLTTGDTIMVPYN-NKKYYINVVETKP-STAVSIIETDCEVDF 178
R +++ LT G+ ++VP N+ + V + +P + I++TD EVD
Sbjct: 206 RDNFTTLTLGEFLLVPVGRNETFRFLVDKMEPQGDGICIVDTDLEVDI 253
>gi|226288504|gb|EEH44016.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 794
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 95/232 (40%), Gaps = 80/232 (34%)
Query: 30 GDKIVMPPSALDRLAYL-----------------------------------------HI 48
GDKI++PPSAL++L +
Sbjct: 27 GDKIILPPSALEQLLAAAPISSTSPTQNHSLTPQFDPFNPHTFVAERRARELAAERQHRL 86
Query: 49 EYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGD------------- 95
P+ F + N S GR+ + G+ EF A E + L ++ E++ L++ D
Sbjct: 87 PQPLTFRIVNPSNGRIVHAGIREFSAQENEVGLSAFLRESLGLEDVDFQPAAADTLREDS 146
Query: 96 ---------------------IVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLR 134
+V + L KGSYV+L+P + D + KA+LE LR
Sbjct: 147 LSNMDIAEFGGGGRATIPSGPLVTIHAKQLPKGSYVRLRPLEAGY-DPEDWKALLERYLR 205
Query: 135 -SYSCLTTGDTIMVPYN-NKKYYINVVETKP-STAVSIIETDCEVDFIPPLD 183
+++ LT G+ ++VP N+ + V + +P + I++TD EVD I LD
Sbjct: 206 DNFTTLTLGEFLLVPGGRNETFRFLVDKVEPQGDGICIVDTDLEVD-IEALD 256
>gi|320581812|gb|EFW96031.1| ubiquitin fusion degradation protein (Ufd1), putative [Ogataea
parapolymorpha DL-1]
Length = 595
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 80/155 (51%), Gaps = 6/155 (3%)
Query: 29 NGDKIVMPPSALDRLAYLH--IEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMM 86
+ DKI +P S L+ L H + +P+ F L+ +A V Y GV EF A E +++ +
Sbjct: 16 HSDKIDLPASVLESLVKQHDPLPHPLTFRLA--TATNVCYAGVREFSAPEDTVFVSGDLF 73
Query: 87 ENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSC-LTTGDTI 145
E + + G V+ + L K + + ++P K + +I + K LE L Y C LT G T+
Sbjct: 74 EALKGEGGFPVQAELIELPKATDLSIKP-LKLYKNILDWKWFLEAKLTKYYCSLTRGQTL 132
Query: 146 MVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIP 180
+ Y + + + +P+ V II+TD +D +P
Sbjct: 133 HLEDEFGSYELLIDKLEPAPTVCIIDTDINLDVVP 167
>gi|431894842|gb|ELK04635.1| Ubiquitin fusion degradation protein 1 like protein [Pteropus
alecto]
Length = 133
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 138 CLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEK 189
CLTTGD I + YN + Y + V+ETKP AVSI E D VDF PL +KEPE+
Sbjct: 42 CLTTGDVIAINYN-EIYELRVMETKPDKAVSITECDVNVDFDAPLGYKEPER 92
>gi|82541281|ref|XP_724892.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23479701|gb|EAA16457.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 97
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/90 (38%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 95 DIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKY 154
D+V +K L S V LQPH K F ++ PK +LE LR YS LT TI + +N+ Y
Sbjct: 3 DVVRLKFVKLETASSVILQPHDKRFFQLNEPKKILEEKLRYYSSLTKNSTICIFHNHFNY 62
Query: 155 YINVV-----ETKPSTAVSIIETDCEVDFI 179
Y +VV + K SI + D DF+
Sbjct: 63 YFDVVKIDSEKKKDVEVASIQDADVIFDFV 92
>gi|320036115|gb|EFW18055.1| ubiquitin fusion degradation protein [Coccidioides posadasii str.
Silveira]
Length = 765
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 109/243 (44%), Gaps = 74/243 (30%)
Query: 30 GDKIVMPPSALDRL----------------------------AYLHIE---------YPM 52
GDKI +PPSAL+ + ++++IE YP+
Sbjct: 40 GDKICLPPSALESILSALPAPSSSRDYSPSVFESFNRYTPSTSFVNIEGRNQGRELPYPL 99
Query: 53 LFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDI---------------- 96
F + N GRV + G++EF A+E + L ++++++ + + ++
Sbjct: 100 TFRIVNPKNGRVIHSGILEFSAEENEVALSPFLLQSLGIHQPELESHPRLSDLGQGEHAA 159
Query: 97 -------------VEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRS-YSCLTTG 142
+ + L KG+YV+L+P + D + KA+LE L + ++ LT G
Sbjct: 160 EDSGRILGHDHPRLTIHAVQLPKGTYVRLRPLEPGY-DTEDWKALLERYLGANFTTLTVG 218
Query: 143 DTIMVPYN-NKKYYINVVETKP-STAVSIIETDCEVDFIPPLDFK---EPEKPSSSSLSN 197
+++ V ++ + + V + +P A+ +++TD EVD I PLD + E E+ L
Sbjct: 219 ESLAVHGRPDEVFQLLVDKVQPEGDAICVVDTDLEVD-IEPLDEEQALESERRRREKLRT 277
Query: 198 RTL 200
++L
Sbjct: 278 KSL 280
>gi|303320937|ref|XP_003070463.1| hypothetical protein CPC735_061910 [Coccidioides posadasii C735
delta SOWgp]
gi|240110159|gb|EER28318.1| hypothetical protein CPC735_061910 [Coccidioides posadasii C735
delta SOWgp]
Length = 761
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 109/243 (44%), Gaps = 74/243 (30%)
Query: 30 GDKIVMPPSALDRL----------------------------AYLHIE---------YPM 52
GDKI +PPSAL+ + ++++IE YP+
Sbjct: 25 GDKICLPPSALESILSALPAPSSSRDYSPSVFESFNRYTPSTSFVNIEGRNQGRELPYPL 84
Query: 53 LFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDI---------------- 96
F + N GRV + G++EF A+E + L ++++++ + + ++
Sbjct: 85 TFRIVNPKNGRVIHSGILEFSAEENEVALSPFLLQSLGIHQPELESHPRLSDLGQGEHAA 144
Query: 97 -------------VEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRS-YSCLTTG 142
+ + L KG+YV+L+P + D + KA+LE L + ++ LT G
Sbjct: 145 EDSGRILGHDHPRLTIHAVQLPKGTYVRLRPLEPGY-DTEDWKALLERYLGANFTTLTVG 203
Query: 143 DTIMVPYN-NKKYYINVVETKP-STAVSIIETDCEVDFIPPLDFK---EPEKPSSSSLSN 197
+++ V ++ + + V + +P A+ +++TD EVD I PLD + E E+ L
Sbjct: 204 ESLAVHGRPDEVFQLLVDKVQPEGDAICVVDTDLEVD-IEPLDEEQALESERRRREKLRT 262
Query: 198 RTL 200
++L
Sbjct: 263 KSL 265
>gi|378732505|gb|EHY58964.1| hypothetical protein HMPREF1120_06965 [Exophiala dermatitidis
NIH/UT8656]
Length = 766
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 76/163 (46%), Gaps = 33/163 (20%)
Query: 50 YPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQE---------------- 93
+P+ F + N GR Y G+ EF A EG I L + E + L +
Sbjct: 85 HPLTFRIQNPRNGRAVYAGIQEFSAPEGTIALSAGLKEALGLSDASERSSKQTSRENTPS 144
Query: 94 GDIVEVKNA-------------SLAKGSYVKLQPHTKDFLDISNPKAVLETTLR-SYSCL 139
GD+V A L KG+YVKL+P + D + K++LE LR +Y+ L
Sbjct: 145 GDVVMTNGADSPKAETVTVHAQQLPKGTYVKLRPLEAGY-DPEDWKSLLERYLRDNYTTL 203
Query: 140 TTGDTIMVP-YNNKKYYINVVETKP-STAVSIIETDCEVDFIP 180
T + ++VP ++++ V + +P + +++TD EVD P
Sbjct: 204 TRSEILVVPGARHERFRFLVDKFEPEGDGICVVDTDLEVDIEP 246
>gi|67541647|ref|XP_664591.1| hypothetical protein AN6987.2 [Aspergillus nidulans FGSC A4]
gi|40742443|gb|EAA61633.1| hypothetical protein AN6987.2 [Aspergillus nidulans FGSC A4]
Length = 1306
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 53/143 (37%), Positives = 79/143 (55%), Gaps = 12/143 (8%)
Query: 47 HIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENM-LLQEGD-----IVEVK 100
+ +P+ F L NT RV Y G+ EF A E I L + E + + QEG IV V
Sbjct: 636 QLPHPLTFRLVNTQNSRVIYAGIREFSARENEIGLSASLREALDISQEGGDADAPIVTVH 695
Query: 101 NASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRS-YSCLTTGDTIMVPYNNK---KYYI 156
L KG+YV+L+P + D + KA+LE LRS Y+ LTTG+T+ VP + K+ +
Sbjct: 696 AEQLPKGTYVRLRPLEAGY-DTDDWKALLERHLRSNYTTLTTGETLTVPRGQEESFKFLV 754
Query: 157 NVVETKPSTAVSIIETDCEVDFI 179
+ VE + + +++TD EVD +
Sbjct: 755 DKVEPQ-GEGICVVDTDLEVDIV 776
>gi|400599671|gb|EJP67368.1| ubiquitin fusion degradation protein [Beauveria bassiana ARSEF
2860]
Length = 730
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 41/191 (21%)
Query: 29 NGDKIVMPPSALDRL----------------AYLHIEYPMLFELSNTSAGRVTYCGVMEF 72
NGDKI++P SAL++L A H+ P+ F L N + + Y G+ EF
Sbjct: 27 NGDKIILPQSALEQLLSASASQAVMQDKYTTASSHLPNPLTFRLVNPTCNKSVYAGIREF 86
Query: 73 IADEGLIYLPYWMMENMLLQEGD--------------IVEVKNASLAKGSYVKLQPHTKD 118
A EG + L +++ + L + +EV +L KG+Y +L+P
Sbjct: 87 SAPEGTVILSPYLLSALGLATDEKATTTTSSSTVSEIRLEVHTETLPKGTYARLRPLEAG 146
Query: 119 FLDISNP---KAVLETTL-RSYSCLTTGDTIMVPYNNKKYYINVVE--TKPSTAVSIIET 172
+ NP + +LE L R ++ LT I+V + + +V+ + V +++T
Sbjct: 147 Y----NPDDWRPLLERQLQRDFTSLTKNAKILVHGVRGEVFQLLVDKLSPEGQGVCVVDT 202
Query: 173 DCEVDFIPPLD 183
D EVD I LD
Sbjct: 203 DLEVD-IEALD 212
>gi|119179624|ref|XP_001241369.1| hypothetical protein CIMG_08532 [Coccidioides immitis RS]
gi|392866712|gb|EAS30114.2| ubiquitin fusion degradation protein [Coccidioides immitis RS]
Length = 761
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 92/186 (49%), Gaps = 37/186 (19%)
Query: 50 YPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDI------------- 96
YP+ F + N GRV + G++EF A+E + L ++++++ + + ++
Sbjct: 82 YPLTFRIVNPKNGRVIHSGILEFSAEENEVALSPFLLQSLGIHQPELESHPRLSDLGQGE 141
Query: 97 ----------------VEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRS-YSCL 139
+ + L KG+YV+L+P + DI + KA+LE L + ++ L
Sbjct: 142 HAAEDSGRILGHDHPRLTIHAVQLPKGTYVRLRPLEPGY-DIDDWKALLERYLGANFTTL 200
Query: 140 TTGDTIMVPYN-NKKYYINVVETKP-STAVSIIETDCEVDFIPPLDFK---EPEKPSSSS 194
T G+++ V ++ + + V + +P A+ +++TD EVD I PLD + E E+
Sbjct: 201 TVGESLAVHGRPDEVFQLLVDKVQPEGDAICVVDTDLEVD-IEPLDEEQALESERRRREK 259
Query: 195 LSNRTL 200
L ++L
Sbjct: 260 LRTKSL 265
>gi|389625613|ref|XP_003710460.1| hypothetical protein MGG_05584 [Magnaporthe oryzae 70-15]
gi|351649989|gb|EHA57848.1| hypothetical protein MGG_05584 [Magnaporthe oryzae 70-15]
Length = 764
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 22/152 (14%)
Query: 50 YPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEG--------------- 94
YP++F L N G+ + GV EF A+EG + L +++ ++ L E
Sbjct: 85 YPLMFRLVNERNGKFVHAGVREFSAEEGQVTLSPFLLRSLGLAEQENTSTVDDGEAESGS 144
Query: 95 ---DIVEVKNASLAKGSYVKLQP-HTKDFLDISNPKAVLETTLR-SYSCLTTGDTIMVPY 149
D V + L KG YV L P H D + + +LE LR Y+ L+TG + V
Sbjct: 145 KRVDNVRISAHQLPKGVYVGLAPVHDYASYDPAILEPLLERELRQGYTTLSTGTILQVKR 204
Query: 150 N-NKKYYINVVETKP-STAVSIIETDCEVDFI 179
+ Y V KP + +I+TD E+D +
Sbjct: 205 GPTEDYEFTVESVKPEGDGICVIDTDLELDLL 236
>gi|367040837|ref|XP_003650799.1| hypothetical protein THITE_2110621 [Thielavia terrestris NRRL 8126]
gi|346998060|gb|AEO64463.1| hypothetical protein THITE_2110621 [Thielavia terrestris NRRL 8126]
Length = 778
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 34/171 (19%)
Query: 42 RLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDI----- 96
R Y + +P++F+L N G Y G+ EF A EG + L +++ + +++ DI
Sbjct: 79 RETYQQLPHPLMFQLVNQKNGNAVYAGIREFSAPEGEVALSPHLLDALGIRDTDIPGTPP 138
Query: 97 -----------------------VEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTL 133
+ V+ L KG+YV+L+P + D + K +LE L
Sbjct: 139 AADGAEDVAQDGNENRPTGEGIQITVRARQLPKGTYVRLRPLEAGY-DPDDWKPLLERQL 197
Query: 134 R-SYSCLTTGDTIMVPYNNKKYYINVVETK---PSTAVSIIETDCEVDFIP 180
R SY+ LT G +I+ K ++ K + +++TD EVD P
Sbjct: 198 RESYTTLTKG-SILSIRGGKGEEFRLLADKFQPEGDGICVVDTDLEVDIEP 247
>gi|440466732|gb|ELQ35980.1| hypothetical protein OOU_Y34scaffold00673g2 [Magnaporthe oryzae
Y34]
gi|440481810|gb|ELQ62352.1| hypothetical protein OOW_P131scaffold01081g2 [Magnaporthe oryzae
P131]
Length = 812
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 22/152 (14%)
Query: 50 YPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEG--------------- 94
YP++F L N G+ + GV EF A+EG + L +++ ++ L E
Sbjct: 133 YPLMFRLVNERNGKFVHAGVREFSAEEGQVTLSPFLLRSLGLAEQENTSTVDDGEAESGS 192
Query: 95 ---DIVEVKNASLAKGSYVKLQP-HTKDFLDISNPKAVLETTLR-SYSCLTTGDTIMVPY 149
D V + L KG YV L P H D + + +LE LR Y+ L+TG + V
Sbjct: 193 KRVDNVRISAHQLPKGVYVGLAPVHDYASYDPAILEPLLERELRQGYTTLSTGTILQVKR 252
Query: 150 N-NKKYYINVVETKP-STAVSIIETDCEVDFI 179
+ Y V KP + +I+TD E+D +
Sbjct: 253 GPTEDYEFTVESVKPEGDGICVIDTDLELDLL 284
>gi|209733504|gb|ACI67621.1| Ubiquitin fusion degradation protein 1 homolog [Salmo salar]
Length = 81
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 16/73 (21%)
Query: 1 AYENHHDAAFERKYRCYPISFI----DKPHLENGDKIVMPPSALDRLAYLHIEYPMLFEL 56
A++N F +YRCY +S + D+ +E G KI+MPPSALD+L+ L+I YPMLF+L
Sbjct: 14 AFQNR----FSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKL 69
Query: 57 SNTSAGRVTYCGV 69
TYC +
Sbjct: 70 --------TYCRL 74
>gi|408395197|gb|EKJ74382.1| hypothetical protein FPSE_05453 [Fusarium pseudograminearum CS3096]
Length = 742
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 49/219 (22%)
Query: 30 GDKIVMPPSALDRL------------------AYLHIEY------PMLFELSNTSAGRVT 65
GDKI++P SAL++L A+ ++ P++F L N
Sbjct: 28 GDKILLPQSALEQLLAAARSLPSTTTRSDPWSAHSDVDSAQQLPNPLIFRLVNPKNKNAV 87
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQE--------------------GDIVEVKNASLA 105
+ G+ EF A EG + L W+ E + +QE G ++V+ L
Sbjct: 88 FAGIREFSATEGTMGLSPWLTEALGIQENEYASLKEVIDLEQDPAQLDGIQIKVEARQLP 147
Query: 106 KGSYVKLQPHTKDFLDISNPKAVLETTLR-SYSCLTTGDTIMVP-YNNKKYYINVVETKP 163
KG+YV+ +P + + + KA+LE LR +++ L+ G I V + +++ + V + P
Sbjct: 148 KGTYVRFRPLEAGY-NPDDWKALLERQLRENFTTLSKGSMIAVKGAHGEEFKLLVDKVAP 206
Query: 164 -STAVSIIETDCEVDFIPPLDFKEPEKPSSSSLSNRTLP 201
+ +++TD EVD I LD ++ + +S + P
Sbjct: 207 EGDGICVVDTDLEVD-IEALDEEQARETLRRIMSEQRGP 244
>gi|82793980|ref|XP_728256.1| ubiquitin fusion degradation 1 [Plasmodium yoelii yoelii 17XNL]
gi|23484517|gb|EAA19821.1| similar to ubiquitin fusion degradation 1 like-related [Plasmodium
yoelii yoelii]
Length = 209
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 70/118 (59%), Gaps = 8/118 (6%)
Query: 64 VTYCGVMEFIADEGLIYLPYWMMENM-LLQEGDIVEV--KNASLAKGSYVKLQPHTKDFL 120
+T+ V+EF ++EG+I + + EN+ + ++ ++ + A+L+K ++K + ++
Sbjct: 1 MTHACVLEFSSNEGIIEVSENIKENLGIFEKNGVIRILISYANLSKCDFIKFESLNENIN 60
Query: 121 DISNPKAVLETTLR-SYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVD 177
DI K +LE L +YS LT GD + + NN K+YI+ E +P AVS+I TD VD
Sbjct: 61 DIKYVKNLLENKLSLNYSTLTLGDYVHI--NNLKFYIS--ELEPDNAVSLINTDITVD 114
>gi|346323978|gb|EGX93576.1| ubiquitin fusion degradation protein (Ufd1), putative [Cordyceps
militaris CM01]
Length = 729
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 44/205 (21%)
Query: 29 NGDKIVMPPSALDRL----------------AYLHIEYPMLFELSNTSAGRVTYCGVMEF 72
+GDKI++P SAL++L + + +P++F L N + Y G+ EF
Sbjct: 27 DGDKIILPQSALEQLLNAAASQAVTQDNYTTSSSQLPHPLIFRLVNRITKKAVYAGIREF 86
Query: 73 IADEGLIYL-PYWMMENMLLQEGDIVEVKNASLA--------------KGSYVKLQPHTK 117
A EG + L PY + L + D KN+SLA KG+Y +L+P
Sbjct: 87 SAPEGTVMLSPYLLSALDLATDQD--NAKNSSLADPPTQLDIFAATLRKGTYARLRPLEA 144
Query: 118 DFLDISNP---KAVLETTL-RSYSCLTTGDTIMVPYNNKKYYINVVETK--PSTAVSIIE 171
+ NP + +LE L R ++ LT TI+V + + +V+ + V +++
Sbjct: 145 GY----NPEDWRPLLERQLRRDFTSLTKDATILVHGVRGEVFRLLVDKLLPEAEGVCVVD 200
Query: 172 TDCEVDFIPPLDFKEPEKPSSSSLS 196
TD EVD I LD ++ + ++S
Sbjct: 201 TDLEVD-IEALDEEQARETLRQAIS 224
>gi|294950381|ref|XP_002786601.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239900893|gb|EER18397.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 578
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 76/162 (46%), Gaps = 8/162 (4%)
Query: 29 NGDKIVMPPSALDRLAYL---HIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWM 85
GD++ +P L++L +++P++FE+ N + +CGV EF A G + + +
Sbjct: 85 GGDRVDLPQEVLEKLQAFGDDKVKFPLMFEIYNPTNDTRLHCGVREFSALTGQVLVGPQL 144
Query: 86 MENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSC-LTTGDT 144
+ L G+ V ++ L + VKL D + ++VLE L + C LT G
Sbjct: 145 AGGLGLMPGEAVRIRYKVLPLCTSVKLVASGTTLGDYRDFRSVLERFLSTNFCTLTLGQV 204
Query: 145 IMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKE 186
+ N ++V +P+ AV ++ D ++D ++ E
Sbjct: 205 FEIDGVN----VHVAGIEPAPAVCVVNADIDLDLTTKIEAAE 242
>gi|46127503|ref|XP_388305.1| hypothetical protein FG08129.1 [Gibberella zeae PH-1]
Length = 741
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 49/201 (24%)
Query: 30 GDKIVMPPSALDRL------------------AYLHIEY------PMLFELSNTSAGRVT 65
GDKI++P SAL++L A+ ++ P++F L N
Sbjct: 28 GDKILLPQSALEQLLAAARSLPSTTTRSDPWSAHSDVDSAQQLPNPLIFRLVNPKNKNAV 87
Query: 66 YCGVMEFIADEGLIYLPYWMMENMLLQE--------------------GDIVEVKNASLA 105
+ G+ EF A EG + L W+ E + +QE G ++V+ L
Sbjct: 88 FAGIREFSATEGTMGLSPWLTEALGIQENEYASLKEVVDLEQDPAQLDGIQIKVEARQLP 147
Query: 106 KGSYVKLQPHTKDFLDISNPKAVLETTLR-SYSCLTTGDTIMVP-YNNKKYYINVVETKP 163
KG+YV+ +P + + + KA+LE LR ++ L+ G I V + +++ + V + P
Sbjct: 148 KGTYVRFRPLEAGY-NPDDWKALLERQLREDFTTLSKGAMIAVKGAHGEEFKLLVDKVAP 206
Query: 164 -STAVSIIETDCEVDFIPPLD 183
+ +++TD EVD I LD
Sbjct: 207 EGDGICVVDTDLEVD-IEALD 226
>gi|358370644|dbj|GAA87255.1| ubiquitin fusion degradation protein [Aspergillus kawachii IFO
4308]
Length = 771
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 90/219 (41%), Gaps = 69/219 (31%)
Query: 29 NGDKIVMPPSALDRLAYL------------------------------------------ 46
+GDKI++PPSAL++L
Sbjct: 26 SGDKIILPPSALEQLLAAAPLQEVTSSGPARPYTSTFDPFNPHTFAAESQARERAVDRQQ 85
Query: 47 HIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQ-------------E 93
+ +P+ F + N RV Y GV EF A E I L ++ + + +
Sbjct: 86 QLPHPLTFRIVNPQNERVVYAGVREFSAPENEIGLSTFLRGALGIDATGPPSQHDDDGTD 145
Query: 94 GDI----------VEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLR-SYSCLTTG 142
G++ V V L KG+YV+L+P + D N KA+LE LR +Y+ LT+G
Sbjct: 146 GEVTDDAPAAPTTVTVHAQQLPKGTYVRLRPLEAGY-DPGNWKALLEQQLRDNYTTLTSG 204
Query: 143 DTIMVPYNNKKYYINVVE-TKP-STAVSIIETDCEVDFI 179
+ + V + + +V+ +P + +++TD EVD +
Sbjct: 205 EVLTVAGGRDQSFQFLVDKVEPHGNGICVVDTDLEVDIV 243
>gi|169610395|ref|XP_001798616.1| hypothetical protein SNOG_08297 [Phaeosphaeria nodorum SN15]
gi|160702051|gb|EAT84573.2| hypothetical protein SNOG_08297 [Phaeosphaeria nodorum SN15]
Length = 691
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 94/229 (41%), Gaps = 81/229 (35%)
Query: 30 GDKIVMPPSALDRL---------------------------------------AYLHIEY 50
GDKI++PPSAL++L + + +
Sbjct: 27 GDKILLPPSALEQLLAAAPIVTFDNDRPHITAFDPFNPYTFNAERQARAQFQDRHQQLPH 86
Query: 51 PMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQ-----------------E 93
P+ F + N GRV Y GV EF A+EG + L ++ E + L+ E
Sbjct: 87 PLTFRIVNPDNGRVLYAGVREFSAEEGEVVLSNFIREALGLEAQSAEPSRKGSPNGHGGE 146
Query: 94 GDIVE----------------VKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRS-Y 136
+++E + L KG++VKL+P + D + K++LE LR+ +
Sbjct: 147 DEVMENGVEQLVVKGTAPRITIHAKQLPKGTFVKLRPLEAGY-DPEDWKSLLEEHLRANF 205
Query: 137 SCLTTGDTIMVPYN------NKKYYINVVETKP-STAVSIIETDCEVDF 178
+ LT G+ ++V +++ V KP +++I+TD EVD
Sbjct: 206 TTLTNGEVLVVHGGRGAGGKREEFRFLVDGFKPEGDGITVIDTDIEVDI 254
>gi|403221492|dbj|BAM39625.1| ubiquitin-fusion degradation pathway component [Theileria
orientalis strain Shintoku]
Length = 330
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%)
Query: 67 CGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPK 126
C +EF DE +Y+P W+M N+ L+ D+V V+ L + V+L+ ++F + ++ K
Sbjct: 213 CSAIEFRTDENYVYVPKWIMNNLKLKPFDVVLVELIKLDDCTNVELKCLEREFYETNDIK 272
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVE 160
VLE L+ YS LT I + + + VV
Sbjct: 273 KVLEERLKYYSTLTLNSVIPITIGDVTFNFKVVR 306
>gi|85097960|ref|XP_960544.1| hypothetical protein NCU05582 [Neurospora crassa OR74A]
gi|28922037|gb|EAA31308.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 784
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 77/167 (46%), Gaps = 37/167 (22%)
Query: 50 YPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDI------------- 96
+P++F+L N S G + G+ EF A+EG + L +++E + + E DI
Sbjct: 89 HPLMFQLINQSNGNSVFAGIREFSANEGEVALSPYLLEALGIHEDDIKDTSPPADTQTDG 148
Query: 97 --------------------VEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLR-S 135
+ VK L KG+Y++L+P + + + K++LE LR S
Sbjct: 149 PEVIDLTEDDAINQTTQGYQITVKARQLPKGTYLRLRPLQAGY-NPDDWKSLLERQLRAS 207
Query: 136 YSCLTTGDTIMVP-YNNKKYYINVVETKP-STAVSIIETDCEVDFIP 180
Y+ LT + V +++ V + +P + +++TD EVD P
Sbjct: 208 YTTLTKDSILSVTGVKGEEFRFLVDKFQPEGNGICVVDTDLEVDIEP 254
>gi|171678090|ref|XP_001903995.1| hypothetical protein [Podospora anserina S mat+]
gi|170937114|emb|CAP61772.1| unnamed protein product [Podospora anserina S mat+]
Length = 775
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 29/159 (18%)
Query: 50 YPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDI------------- 96
+P++F+L N G Y G+ EF A+E + L ++++ + +Q DI
Sbjct: 88 HPLMFQLVNQKNGNSVYAGIREFSANEDEVALSPYLIDALGIQHEDIQQEPTFEDEVVDL 147
Query: 97 ------------VEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDT 144
+ VK L KG+YV+L+P + + + K++LE LR+ T D+
Sbjct: 148 TDDEPTKTEELRITVKARQLPKGTYVRLRPLEAGY-NPDDWKSLLERQLRANFTTLTKDS 206
Query: 145 IMVPYNNKKYYINVVETK---PSTAVSIIETDCEVDFIP 180
I+ + K + K + + +++TD EVD P
Sbjct: 207 ILSVHGVKGEEFRFLVDKFLPEGSGICVVDTDLEVDIEP 245
>gi|336276448|ref|XP_003352977.1| hypothetical protein SMAC_03295 [Sordaria macrospora k-hell]
gi|380092461|emb|CCC09738.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 784
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 75/167 (44%), Gaps = 37/167 (22%)
Query: 50 YPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDI------------- 96
+P++F+L N G + G+ EF A+EG + L +++E + + E DI
Sbjct: 89 HPLMFQLVNQKNGNSVFAGIREFSANEGEVALSPYLLEALGIHEDDIKDTSAPADAQTEG 148
Query: 97 --------------------VEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSY 136
+ VK L KG+YV+L+P + + + K++LE LR+
Sbjct: 149 PEVVDLTQDDAISQITEGYRITVKARQLPKGTYVRLRPLEAGY-NPDDWKSLLERQLRAS 207
Query: 137 SCLTTGDTIM--VPYNNKKYYINVVETKP-STAVSIIETDCEVDFIP 180
T D+I+ +++ V + +P + +++TD EVD P
Sbjct: 208 YTTLTKDSILSVTGVKGEEFRFLVDKFQPEGNGICVVDTDLEVDIEP 254
>gi|296413578|ref|XP_002836487.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630312|emb|CAZ80678.1| unnamed protein product [Tuber melanosporum]
Length = 753
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 88/176 (50%), Gaps = 27/176 (15%)
Query: 50 YPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQ---------EGDIVE-- 98
+P++F L N R ++ +EF A+EG I + + + + + EG++VE
Sbjct: 83 HPLMFRLFNPRNNRFSHAAPLEFSAEEGKIGISPLLRDALGIDEDVEMKGAGEGELVEDE 142
Query: 99 -----VKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLR-SYSCLTTGD-------TI 145
V L +G+YV+L+P + D + KA+LE LR +++ LT G+ T+
Sbjct: 143 EKRITVVWKDLPRGTYVRLRPLEAGY-DEEDWKALLERYLRVNFTTLTVGEILAIGGRTL 201
Query: 146 MVPYNNKKYYINVVET-KPSTAVSIIETDCEVDFIPPLDFKEPEKPSSSSLSNRTL 200
+ K + +++ KP AV I++TD EVD I PL ++ + L+ +++
Sbjct: 202 AIGGKEKAEFRFLIDAMKPEEAVCIVDTDLEVD-IEPLSEEQARETLKQRLARKSV 256
>gi|451996704|gb|EMD89170.1| hypothetical protein COCHEDRAFT_1180487 [Cochliobolus
heterostrophus C5]
Length = 792
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 93/235 (39%), Gaps = 85/235 (36%)
Query: 30 GDKIVMPPSALDRLA----YLHIE-----------------------------------Y 50
GDK+++PPSAL++L +H++ +
Sbjct: 30 GDKVLLPPSALEQLLAAAPVVHVDANQPHLTAFDPFNPYTFNAERYARAQAQDRFQQLPH 89
Query: 51 PMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQE----------------G 94
P+ F L N GR + G+ EF A+EG I L ++ E + +QE G
Sbjct: 90 PLTFRLVNPDNGRAVHAGIREFSAEEGEIVLSSFLKEALGIQERSAEPSRNGSPDGDKDG 149
Query: 95 DI---------------------VEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTL 133
D + V L KG++VKL+P + D + K++LE L
Sbjct: 150 DHTMENGVDKPLGSGSNNDAAIKITVHAKQLPKGAFVKLRPLEAGY-DPEDWKSLLEEHL 208
Query: 134 RS-YSCLTTGDTI------MVPYNNKKYYINVVETKP-STAVSIIETDCEVDFIP 180
RS Y+ LT G+ + V +++ + KP + +++TD EVD P
Sbjct: 209 RSNYTTLTNGEILVVHGGRGVGGKREEFRFLIDGFKPEGEGICVVDTDLEVDIEP 263
>gi|429855779|gb|ELA30720.1| ubiquitin fusion degradation protein [Colletotrichum
gloeosporioides Nara gc5]
Length = 729
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 86/210 (40%), Gaps = 63/210 (30%)
Query: 30 GDKIVMPPSALDRL------------------------------AYL----HIEYPMLFE 55
GDKI++P SAL++L AY + P++F
Sbjct: 29 GDKILLPQSALEQLLAASPRPPAPSNSSFTSYDPFNPYARQHQAAYRDTSQQLPNPLMFR 88
Query: 56 LSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENM------------------LLQEGD-- 95
L N G V Y G+ EF A+EG I L ++M+ + L E D
Sbjct: 89 LVNQKNGNVVYAGIREFSAEEGEIALGSYLMDALGILPSEFKSDGTGSKPLDLTAEMDHD 148
Query: 96 ---IVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLR-SYSCLTTGDTIMVPYNN 151
V V L KG+YV+L+P + + + K++LE LR SY+ LT DTI+
Sbjct: 149 AQPRVTVHAKQLPKGTYVRLRPLEAGY-NPDDWKSLLERQLRESYTTLTK-DTILSVRGV 206
Query: 152 KKYYINVVETK---PSTAVSIIETDCEVDF 178
K + K + +++TD EVD
Sbjct: 207 KGEQFKFLIDKFLPDGDGICVVDTDLEVDI 236
>gi|358341180|dbj|GAA48923.1| ubiquitin fusion degradation protein 1 homolog [Clonorchis
sinensis]
Length = 156
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 32/44 (72%)
Query: 85 MMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAV 128
M+ N+LL+EG V V NA+L ++ + QP + DFLDISNP+AV
Sbjct: 1 MLRNLLLEEGGRVSVCNAALRTATFARFQPQSVDFLDISNPQAV 44
>gi|354547965|emb|CCE44700.1| hypothetical protein CPAR2_405040 [Candida parapsilosis]
Length = 653
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 81/160 (50%), Gaps = 10/160 (6%)
Query: 31 DKIVMPPSALDRLAYLHIE--YPMLFELSNTSAGRV-TYCGVMEFIADEGLIYLPYWMME 87
DK ++P + L + IE +P++F+++N S V TY GV EF ++ G + LP ++
Sbjct: 21 DKAILPANILSEIINDEIELPHPLIFKITNQSDPFVYTYIGVKEFTSEPGEVILPSFV-- 78
Query: 88 NMLLQE-GDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDTIM 146
N LQ D+ ++ K + ++P + ++ N K LE LR Y+ + D ++
Sbjct: 79 NAKLQNPTDVSLELERNIPKAISLCIKPKLF-YANVKNWKFFLEEKLRDYTVVNRNDCVI 137
Query: 147 VPYNNKKYYINVVETK---PSTAVSIIETDCEVDFIPPLD 183
+ + KY + V + T SII+TD +D +P D
Sbjct: 138 IEDDGLKYELIVEQINGPDNVTVASIIDTDVTLDIVPLND 177
>gi|412985753|emb|CCO16953.1| unknown protein [Bathycoccus prasinos]
Length = 455
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 81/197 (41%), Gaps = 43/197 (21%)
Query: 31 DKIVMPPSALDRL-------------AYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEG 77
DKI +P SAL L A+ ++ E + G YC +++ A+E
Sbjct: 91 DKIQLPASALRMLERFDDEMGARQPNAFFYVSRVDEDEDEDEDKG--CYCAALDYQAEED 148
Query: 78 LIYLPYWMMENMLLQEGD-----IVEVKNASLAKGSYVKLQPHTKDFLDI------SNPK 126
+ +P + + + GD VE ++ +L K +VKLQP + +F ++ K
Sbjct: 149 SVVIPTDLYKRLGYSSGDEKNLLRVEFRSRALEKCEWVKLQPKSNEFSKFLTRHPEADVK 208
Query: 127 AVLETTLRSYSCLTTGDTIMVPYNNKK------------YYINVVETK-----PSTAVSI 169
VLE L SC+ GD V ++ + + VV K S+
Sbjct: 209 MVLENVLVQRSCVHVGDVFEVDFSGFVSSSSSPSESKFVFELKVVSLKVEGGEEDIVASL 268
Query: 170 IETDCEVDFIPPLDFKE 186
IETD EVD P ++ E
Sbjct: 269 IETDVEVDLAPSMEHDE 285
>gi|66358660|ref|XP_626508.1| ubiquitin fusion degradation (UFD1) family protein, double Psi beta
barrel fold [Cryptosporidium parvum Iowa II]
gi|46227780|gb|EAK88700.1| ubiquitin fusion degradation (UFD1) family protein, double Psi beta
barrel fold [Cryptosporidium parvum Iowa II]
Length = 658
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 89/172 (51%), Gaps = 25/172 (14%)
Query: 31 DKIVMPPSALDRLAYLHIEYPMLFE---LSNTSAGRV----TYCGVMEFIADEGLIYLPY 83
D++++P + L L+ YP+ F L++ + + T+CGV+++ + G I LP
Sbjct: 113 DQVILPNNLLKILSSDESIYPLYFNIKCLNHHISENINPIETHCGVLDYSEEPGYISLPN 172
Query: 84 WMMENMLLQEGD----------IVEVKNASLAKGSYVKLQP-HTKDFLDISNPKAVLETT 132
++ + + D +++ L KGS+ + + +D + + +++LE+
Sbjct: 173 KVLRCLNINPNDSDFKSNKPIIWIQITYKKLLKGSFASFEILNNQDIFKMHDIESLLESY 232
Query: 133 LRS-YSCLTTGDTIMV---PYNNKKYYINVVETK---PSTAVSIIETDCEVD 177
LR+ + LT GDT+M+ Y++ Y I++++ K P ++S+I TD +D
Sbjct: 233 LRNHFLTLTIGDTLMINQPNYSSNNYCISLIKVKHLEPDNSISLINTDISLD 284
>gi|145344654|ref|XP_001416843.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577069|gb|ABO95136.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 408
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 25/146 (17%)
Query: 63 RVTYCGVMEF-IADEGLIYLPYWMMENMLLQEGD------------IVEVKNASLAKGSY 109
R T+ GV+++ D G I LP +M + L GD +V V A+L G+
Sbjct: 124 RKTHVGVLDYGSVDSGTIGLPEPVMRTLGLT-GDAAREDGADADARLVRVTYAALPLGTK 182
Query: 110 VKLQPH----TKDFLDISNPKAVLETTLRSYSCLTTGDTIMVPYN---NKKYYINVVETK 162
+ L+P +DF+D + + VLE + S T GD ++V +K Y + V +
Sbjct: 183 MTLKPRMNDFARDFVD-QDVREVLERVMMGRSAATVGDEVVVASTTDPSKTYELKVTAVE 241
Query: 163 PST---AVSIIETDCEVDFIPPLDFK 185
P AVS++ETD EV+ P +++
Sbjct: 242 PDDGFGAVSLLETDVEVELEPSEEYE 267
>gi|401404360|ref|XP_003881706.1| YGR048Wp-like protein, related [Neospora caninum Liverpool]
gi|325116119|emb|CBZ51673.1| YGR048Wp-like protein, related [Neospora caninum Liverpool]
Length = 272
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 55 ELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQP 114
E +A R V++F A + I+LP W M+ + L+ IV K L ++V LQP
Sbjct: 121 EKKEMAAPRRVSVSVLDFAAPKNFIFLPLWAMKTLNLRPFSIVACKWERLPLAAHVTLQP 180
Query: 115 HTKDFLDI-----SNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINV 158
+ FL + + VLE +R YS LT I V + +++ V
Sbjct: 181 ASAAFLRAVKATNQDIQKVLEEEIRHYSSLTANTVIPVKIQGETFWLRV 229
>gi|322700532|gb|EFY92286.1| ubiquitin fusion degradation protein (Ufd1), putative [Metarhizium
acridum CQMa 102]
Length = 757
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 93/224 (41%), Gaps = 65/224 (29%)
Query: 18 PISFIDKPHLENGDKIVMPPSALDRLAYL------------------------------- 46
P + HL +GDKIV+P SAL++L
Sbjct: 17 PTTATSVKHL-SGDKIVLPQSALEQLLTAAPSQPITASSFTAWDPHNPYRSNGFGFEQRQ 75
Query: 47 HIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQ-------------- 92
+ +P+ F L N+ G V + G+ EF A+EG + L +++E + ++
Sbjct: 76 QLPHPLTFRLVNSQNGNVVFAGIREFSAEEGTMGLSSFLIEALGIEPQQLNATNGNGTSD 135
Query: 93 ------EGDIV---------EVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRS-Y 136
GD V V ++ KG+YV+L+P + + + K++LE LR Y
Sbjct: 136 ADAIDLTGDHVPSTAASTKITVHATNVPKGTYVRLRPLEAGY-NPDDWKSLLERHLREHY 194
Query: 137 SCLTTGDTIMVPYNNKKYYINVVE--TKPSTAVSIIETDCEVDF 178
+CLT + V + + +V+ + + +++TD EVD
Sbjct: 195 TCLTKSSILSVNGVKGETFKFLVDNLSPEGDGICVVDTDLEVDI 238
>gi|255555469|ref|XP_002518771.1| hypothetical protein RCOM_0813620 [Ricinus communis]
gi|223542152|gb|EEF43696.1| hypothetical protein RCOM_0813620 [Ricinus communis]
Length = 153
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 69/176 (39%), Gaps = 75/176 (42%)
Query: 86 MENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDTI 145
ME +LLQEG A L KG++++LQPH+ DFL I++ +A E L
Sbjct: 1 MEYLLLQEG-------AKLEKGTFIRLQPHSVDFLSIADLRAAPEGIL------------ 41
Query: 146 MVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEKPSSSSLSNRTLPEVKE 205
+C V+F PLD++EPE+P
Sbjct: 42 ---------------------------NCVVEFACPLDYEEPERPVQ------------- 61
Query: 206 EPPLDFKGPEK---PSSSSLSNRTPPEVKEEPPKKIAKFSPFTGSGRCLNGKSSTQ 258
P K + S+ + KE+P F PF G R L+GKSST+
Sbjct: 62 --------PVKAVVAAKSAFLRKGKVADKEKPG-----FLPFQGQARRLDGKSSTE 104
>gi|342875442|gb|EGU77209.1| hypothetical protein FOXB_12286 [Fusarium oxysporum Fo5176]
Length = 750
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 88/209 (42%), Gaps = 57/209 (27%)
Query: 30 GDKIVMPPSALDRL--------------------------AYLHIEYPMLFELSNTSAGR 63
GDKI++P SAL++L + P++F L N
Sbjct: 28 GDKILLPQSALEQLLAAARSRPSTTTARSDPWSYSSSDADTAQQLPNPLIFRLVNPKNKN 87
Query: 64 VTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIV-------------------------- 97
+ G+ EF A EG + L W+ E + +QE + V
Sbjct: 88 AVFAGIREFSASEGTLGLSPWLTEALGIQEDECVSPKEVIDLEQDTAQNSERMDVDGIQI 147
Query: 98 EVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLR-SYSCLTTGDTIMVP-YNNKKYY 155
+V+ L KG+YV+L+P + + + K +LE LR +++ L+ G + V +++
Sbjct: 148 KVEARQLPKGTYVRLRPLEAGY-NPDDWKPLLERQLRENFTTLSKGSMLAVKGARGEEFK 206
Query: 156 INVVETKP-STAVSIIETDCEVDFIPPLD 183
+ V + P + +++TD EVD I LD
Sbjct: 207 LLVDKVAPEGDGICVVDTDLEVD-IEALD 234
>gi|119486702|ref|XP_001262337.1| ubiquitin fusion degradation protein (Ufd1), putative [Neosartorya
fischeri NRRL 181]
gi|119410494|gb|EAW20440.1| ubiquitin fusion degradation protein (Ufd1), putative [Neosartorya
fischeri NRRL 181]
Length = 797
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 41/178 (23%)
Query: 40 LDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEG----- 94
LDR L +P+ F L N + R Y G+ EF A EG + L ++ + + +++G
Sbjct: 81 LDRQKQL--PHPLTFRLVNPNNDRAIYAGIREFSAVEGEVGLSAFLRQALDIEDGPFQLQ 138
Query: 95 ------------DI------------------VEVKNASLAKGSYVKLQPHTKDFLDISN 124
D+ V V L KG+YV+L+P + D +
Sbjct: 139 TGEHGTETAQSTDLNNGERSESVRSTSHSAPTVTVHAKQLPKGTYVRLRPLEAGY-DPED 197
Query: 125 PKAVLETTLR-SYSCLTTGDTIMVPYN-NKKYYINVVETKP-STAVSIIETDCEVDFI 179
KA+LE LR +++ LT G+ + V N N+ + V + +P + +++TD EVD +
Sbjct: 198 WKALLERYLRDNFTTLTIGELLSVSGNRNELFRFLVDKVEPEGDGICVVDTDLEVDIV 255
>gi|70982243|ref|XP_746650.1| ubiquitin fusion degradation protein (Ufd1) [Aspergillus fumigatus
Af293]
gi|66844273|gb|EAL84612.1| ubiquitin fusion degradation protein (Ufd1), putative [Aspergillus
fumigatus Af293]
gi|159122114|gb|EDP47236.1| ubiquitin fusion degradation protein (Ufd1), putative [Aspergillus
fumigatus A1163]
Length = 795
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 41/178 (23%)
Query: 40 LDRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENM-------LLQ 92
LDR L +P+ F L N + R Y G+ EF A EG + L ++ + + LQ
Sbjct: 81 LDRQKQL--PHPLTFRLVNPNNERAIYAGIREFSAAEGEVGLSGFLRQALDIEDEPFQLQ 138
Query: 93 EGD----------------------------IVEVKNASLAKGSYVKLQPHTKDFLDISN 124
G+ + V L KG+YV+L+P + D +
Sbjct: 139 TGEHGTETAHSPDLNNREGSGSVRSTRHSTPTITVHAKQLPKGTYVRLRPLEAGY-DPED 197
Query: 125 PKAVLETTLR-SYSCLTTGDTIMVPYN-NKKYYINVVETKP-STAVSIIETDCEVDFI 179
KA+LE LR +++ LT G+ + V N N+++ V + +P + +++TD EVD +
Sbjct: 198 WKALLERYLRDNFTTLTIGELLSVSGNRNERFRFLVDKVEPEGDGICVVDTDLEVDIV 255
>gi|239609072|gb|EEQ86059.1| ubiquitin fusion degradation protein [Ajellomyces dermatitidis
ER-3]
gi|327356440|gb|EGE85297.1| ubiquitin fusion degradation protein [Ajellomyces dermatitidis ATCC
18188]
Length = 808
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 95/228 (41%), Gaps = 80/228 (35%)
Query: 30 GDKIVMPPSALDRL-----------AYLH------------------------------I 48
GDKI++PPSAL++L A+ H +
Sbjct: 27 GDKILLPPSALEQLLAAAPVTSIESAHTHSLTPQFDPFNPHTFAAERRARELVADRQQQL 86
Query: 49 EYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGD------------- 95
P+ F + N S GR+ + G+ EF A E + L ++ +++ L +GD
Sbjct: 87 PQPLTFRIVNPSNGRIVHAGIREFSAQENEVGLSAFLRQSLGLDDGDFPSAGKRVISAEE 146
Query: 96 ----------------------IVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTL 133
IV + L KG+YV+L+P + D + KA+LE L
Sbjct: 147 SPSDVDMLEPGDGNISNIPEGPIVTIHARQLPKGTYVRLRPLEAGY-DPEDWKALLERHL 205
Query: 134 R-SYSCLTTGDTIMVPYN-NKKYYINVVETKP-STAVSIIETDCEVDF 178
R +++ LT G+ +++P N+ + V + +P + I++TD EVD
Sbjct: 206 RENFTTLTLGELLLIPGGRNETFRFLVDKVEPQGDGICIVDTDLEVDI 253
>gi|261188075|ref|XP_002620454.1| ubiquitin fusion degradation protein [Ajellomyces dermatitidis
SLH14081]
gi|239593329|gb|EEQ75910.1| ubiquitin fusion degradation protein [Ajellomyces dermatitidis
SLH14081]
Length = 808
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 95/228 (41%), Gaps = 80/228 (35%)
Query: 30 GDKIVMPPSALDRL-----------AYLH------------------------------I 48
GDKI++PPSAL++L A+ H +
Sbjct: 27 GDKILLPPSALEQLLAAAPITSIESAHTHSLTPQFDPFNPHTFAAERRARELVADRQQQL 86
Query: 49 EYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGD------------- 95
P+ F + N S GR+ + G+ EF A E + L ++ +++ L +GD
Sbjct: 87 PQPLTFRIVNPSNGRIVHAGIREFSAQENEVGLSAFLRQSLGLDDGDFPSAGKRVISAEE 146
Query: 96 ----------------------IVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTL 133
IV + L KG+YV+L+P + D + KA+LE L
Sbjct: 147 SPSDVDMLEPGDGNISNIPEGPIVTIHARQLPKGTYVRLRPLEAGY-DPEDWKALLERHL 205
Query: 134 R-SYSCLTTGDTIMVPYN-NKKYYINVVETKP-STAVSIIETDCEVDF 178
R +++ LT G+ +++P N+ + V + +P + I++TD EVD
Sbjct: 206 RENFTTLTLGELLLIPGGRNETFRFLVDKVEPQGDGICIVDTDLEVDI 253
>gi|255761618|gb|ACU32852.1| apicoplast ubiquitin fusion degradation protein [Toxoplasma gondii]
Length = 521
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 15/159 (9%)
Query: 58 NTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTK 117
TS RV+ V++F A I+LP W+M+ + L+ IV K L +V LQP +
Sbjct: 348 RTSPRRVSV-SVLDFSAPRNFIFLPLWVMKALDLRPFSIVACKWERLPLAGHVTLQPTSS 406
Query: 118 DFLDI-----SNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKP--------- 163
F+ + + VLE +R YS LT I V + + ++V + +
Sbjct: 407 AFVRAVQATGRDIQKVLEQEIRHYSSLTANSVIPVKIQGQTFRLHVRQIQAEGNAATGED 466
Query: 164 STAVSIIETDCEVDFIPPLDFKEPEKPSSSSLSNRTLPE 202
+ V + ++D +P D + E S+ R E
Sbjct: 467 ADHVCVQDSDVATTLLPAKDEERTETEPSAVAQGRLTGE 505
>gi|238508803|ref|XP_002385585.1| ubiquitin fusion degradation protein (Ufd1), putative [Aspergillus
flavus NRRL3357]
gi|220688477|gb|EED44830.1| ubiquitin fusion degradation protein (Ufd1), putative [Aspergillus
flavus NRRL3357]
Length = 590
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 76/169 (44%), Gaps = 41/169 (24%)
Query: 50 YPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGD-------------- 95
+P+ F + N GR Y G+ EF A+E + L ++ + + +++
Sbjct: 89 HPLTFRIVNPKNGRAIYAGIREFSAEENEVGLSAFLRDALGIEDDQFPSETYGYWQTSEL 148
Query: 96 ---------------------IVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLR 134
+V V L KG+YV+L+P + D + KA+LE LR
Sbjct: 149 SETIDGTAESQPTSLAPDLAPLVTVHVEQLPKGAYVRLRPLEAGY-DPEDWKALLERYLR 207
Query: 135 -SYSCLTTGDTIMV---PYNNKKYYINVVETKPSTAVSIIETDCEVDFI 179
+++ L+TG+ + V + + ++ ++ +E + II+TD EVD +
Sbjct: 208 DNFTTLSTGEVLQVSGGQHESFRFLVDKIEPA-GDGICIIDTDLEVDIV 255
>gi|237839821|ref|XP_002369208.1| hypothetical protein TGME49_085700 [Toxoplasma gondii ME49]
gi|211966872|gb|EEB02068.1| hypothetical protein TGME49_085700 [Toxoplasma gondii ME49]
Length = 398
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 15/159 (9%)
Query: 58 NTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTK 117
TS RV+ V++F A I+LP W+M+ + L+ IV K L +V LQP +
Sbjct: 225 RTSPRRVS-VSVLDFSAPRNFIFLPLWVMKALDLRPFSIVACKWERLPLAGHVTLQPTSS 283
Query: 118 DFLDI-----SNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKP--------- 163
F+ + + VLE +R YS LT I V + + ++V + +
Sbjct: 284 AFVRAVQATGRDIQKVLEQEIRHYSSLTANSVIPVKIQGQTFRLHVRQIQAEGNAATGED 343
Query: 164 STAVSIIETDCEVDFIPPLDFKEPEKPSSSSLSNRTLPE 202
+ V + ++D +P D + E S+ R E
Sbjct: 344 ADHVCVQDSDVATTLLPAKDEERTETEPSAVAQGRLTGE 382
>gi|317157706|ref|XP_001826533.2| ubiquitin fusion degradation protein (Ufd1) [Aspergillus oryzae
RIB40]
Length = 780
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 76/169 (44%), Gaps = 41/169 (24%)
Query: 50 YPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGD-------------- 95
+P+ F + N GR Y G+ EF A+E + L ++ + + +++
Sbjct: 89 HPLTFRIVNPKNGRAIYAGIREFSAEENEVGLSAFLRDALGIEDDQFPSETYGYWQTSEL 148
Query: 96 ---------------------IVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLR 134
+V V L KG+YV+L+P + D + KA+LE LR
Sbjct: 149 SETIDGTAESQPTSLAPDLAPLVTVHVEQLPKGAYVRLRPLEAGY-DPEDWKALLERYLR 207
Query: 135 -SYSCLTTGDTIMV---PYNNKKYYINVVETKPSTAVSIIETDCEVDFI 179
+++ L+TG+ + V + + ++ ++ +E + II+TD EVD +
Sbjct: 208 DNFTTLSTGEVLQVSGGQHESFRFLVDKIE-PAGDGICIIDTDLEVDIV 255
>gi|83775278|dbj|BAE65400.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391868510|gb|EIT77724.1| hypothetical protein Ao3042_06006 [Aspergillus oryzae 3.042]
Length = 798
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 76/169 (44%), Gaps = 41/169 (24%)
Query: 50 YPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGD-------------- 95
+P+ F + N GR Y G+ EF A+E + L ++ + + +++
Sbjct: 89 HPLTFRIVNPKNGRAIYAGIREFSAEENEVGLSAFLRDALGIEDDQFPSETYGYWQTSEL 148
Query: 96 ---------------------IVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLR 134
+V V L KG+YV+L+P + D + KA+LE LR
Sbjct: 149 SETIDGTAESQPTSLAPDLAPLVTVHVEQLPKGAYVRLRPLEAGY-DPEDWKALLERYLR 207
Query: 135 -SYSCLTTGDTIMV---PYNNKKYYINVVETKPSTAVSIIETDCEVDFI 179
+++ L+TG+ + V + + ++ ++ +E + II+TD EVD +
Sbjct: 208 DNFTTLSTGEVLQVSGGQHESFRFLVDKIEPA-GDGICIIDTDLEVDIV 255
>gi|221504782|gb|EEE30447.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 398
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 15/159 (9%)
Query: 58 NTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTK 117
TS RV+ V++F A I+LP W+M+ + L+ IV K L +V LQP +
Sbjct: 225 RTSPRRVS-VSVLDFSAPRNFIFLPLWVMKALDLRPFSIVACKWERLPLAGHVTLQPTSS 283
Query: 118 DFLDI-----SNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKP--------- 163
F+ + + VLE +R YS LT I V + + ++V + +
Sbjct: 284 AFVRAVQATGRDIQKVLEEEIRHYSSLTANSVIPVKIQGQTFRLHVRQIQAEGNAATGED 343
Query: 164 STAVSIIETDCEVDFIPPLDFKEPEKPSSSSLSNRTLPE 202
+ V + ++D +P D + E S+ R E
Sbjct: 344 ADHVCVQDSDVATTLLPAKDEERTETAPSAVAQGRLTGE 382
>gi|221484588|gb|EEE22882.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 390
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 66/157 (42%), Gaps = 14/157 (8%)
Query: 60 SAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDF 119
+A R V++F A I+LP W+M+ + L+ IV K L +V LQP + F
Sbjct: 218 TAPRRVSVSVLDFSAPRNFIFLPLWVMKALDLRPFSIVACKWERLPLAGHVTLQPTSSAF 277
Query: 120 LDI-----SNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKP---------ST 165
+ + + VLE +R YS LT I V + + ++V + + +
Sbjct: 278 VRAVQATGRDIQKVLEEEIRHYSSLTANSVIPVKIQGQTFRLHVRQIQAEGNAATGEDAD 337
Query: 166 AVSIIETDCEVDFIPPLDFKEPEKPSSSSLSNRTLPE 202
V + ++D +P D + E S+ R E
Sbjct: 338 HVCVQDSDVATTLLPAKDEERTETEPSAVAQGRLTGE 374
>gi|167518107|ref|XP_001743394.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778493|gb|EDQ92108.1| predicted protein [Monosiga brevicollis MX1]
Length = 558
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 68 GVMEFIADEGLIYLPYWMMENMLLQEGDIVE---VKNASLAKGSYVKLQPHTKDFLDISN 124
GV F A YLP WMME + ++EG + V+ +L + V+L+ + FL++ N
Sbjct: 69 GVGHFDAPPDTFYLPVWMMEVLGVKEGARIRFEVVEGTALPRADTVQLKANDPAFLELPN 128
Query: 125 PKAVLETTL-RSYSCLT 140
P+AVLE L SY LT
Sbjct: 129 PRAVLENALSASYRTLT 145
>gi|325092225|gb|EGC45535.1| ubiquitin fusion degradation protein [Ajellomyces capsulatus H88]
Length = 743
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 72/220 (32%)
Query: 30 GDKIVMPPSALDRL-----------AYLH------------------------------I 48
GDKI++PPSAL++L A+ H +
Sbjct: 29 GDKILLPPSALEQLLAAAPITSVESAHTHALTPQFDPFNPHTFAAERRARELFENRQQQL 88
Query: 49 EYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENM------------------- 89
P+ F L N S GRV + G+ EF A E + L ++ +++
Sbjct: 89 PNPLTFRLVNPSNGRVVHAGIREFSAQENEVGLSSFLRQSLGLDDVAFPSAGEDSSSDVD 148
Query: 90 LLQEGDI--------VEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLR-SYSCLT 140
+L+ G + V + L +GSYV+L+P + D + KA+LE LR +++ LT
Sbjct: 149 MLESGKVSDMTKRPLVTIHAKRLPRGSYVRLRPLEAGY-DPEDWKALLERHLRENFTTLT 207
Query: 141 TGDTIMVPY-NNKKYYINVVETKP-STAVSIIETDCEVDF 178
G+ +++P N+ + V + +P + I++TD EVD
Sbjct: 208 LGELLLIPGPRNETFRFLVDKVEPQGDGICIVDTDLEVDI 247
>gi|240281281|gb|EER44784.1| ubiquitin fusion degradation protein [Ajellomyces capsulatus H143]
Length = 716
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 72/220 (32%)
Query: 30 GDKIVMPPSALDRL-----------AYLH------------------------------I 48
GDKI++PPSAL++L A+ H +
Sbjct: 29 GDKILLPPSALEQLLAAAPITSVESAHTHALTPQFDPFNPHTFAAERRARELFENRQQQL 88
Query: 49 EYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENM------------------- 89
P+ F L N S GRV + G+ EF A E + L ++ +++
Sbjct: 89 PNPLTFRLVNPSNGRVVHAGIREFSAQENEVGLSSFLRQSLGLDDVAFPSAGEDSSSDVD 148
Query: 90 LLQEGDI--------VEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLR-SYSCLT 140
+L+ G + V + L +GSYV+L+P + D + KA+LE LR +++ LT
Sbjct: 149 MLESGKVSDMTKRPLVTIHAKRLPRGSYVRLRPLEAGY-DPEDWKALLERHLRENFTTLT 207
Query: 141 TGDTIMVPY-NNKKYYINVVETKP-STAVSIIETDCEVDF 178
G+ +++P N+ + V + +P + I++TD EVD
Sbjct: 208 LGELLLIPGPRNETFRFLVDKVEPQGDGICIVDTDLEVDI 247
>gi|323449489|gb|EGB05377.1| hypothetical protein AURANDRAFT_17647 [Aureococcus anophagefferens]
Length = 98
Score = 50.1 bits (118), Expect = 0.002, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 43/81 (53%)
Query: 95 DIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKY 154
D++ V L G ++LQPH FL ++NP+AVLE L+ YS T TI + ++ +Y
Sbjct: 2 DVLLVTWVKLNDGVTIELQPHQDAFLKLANPRAVLEAELKYYSSATRLSTISLLHDGTQY 61
Query: 155 YINVVETKPSTAVSIIETDCE 175
+V T + + E + E
Sbjct: 62 DFDVTATVGKDGLKVDEYNPE 82
>gi|346975076|gb|EGY18528.1| hypothetical protein VDAG_09054 [Verticillium dahliae VdLs.17]
Length = 722
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 26/153 (16%)
Query: 51 PMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMME------NMLLQEGDI-------- 96
P+ F L N G + G+ EF A+EG + L ++ME +M E DI
Sbjct: 88 PLTFRLVNPINGNAVHAGIREFSAEEGQVALGPYLMEALGIDSSMFASESDIDSDAHATS 147
Query: 97 --------VEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSYSCLTTGDTIMVP 148
+ + L KG+YV+L+P + + + K++LE LR T D ++
Sbjct: 148 DQSKAYPRITIHAKHLPKGTYVRLRPLEAGY-NPDDWKSLLERQLRQSFTTLTKDAVLAV 206
Query: 149 YNNKKYYINVVETKPS---TAVSIIETDCEVDF 178
K + K S + +++TD EVD
Sbjct: 207 RGVKGEQFQFLIDKFSPEGDGICVVDTDLEVDI 239
>gi|225555075|gb|EEH03368.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 810
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 95/220 (43%), Gaps = 72/220 (32%)
Query: 30 GDKIVMPPSALDRL-----------AYLH------------------------------I 48
GDKI++PPSAL++L A+ H +
Sbjct: 29 GDKILLPPSALEQLLAAAPITSVESAHTHALTPQFDPFNPHTFAAERRARELFENRQQQL 88
Query: 49 EYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENM------------------- 89
P+ F + N S GRV + G+ EF A E + L ++ +++
Sbjct: 89 PNPLTFRIVNPSNGRVVHAGIREFSAQENEVGLSSFLRQSLGLDDVAFPSTGEDSSSDVD 148
Query: 90 LLQEGDI--------VEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLR-SYSCLT 140
+L+ G + V + L +GSYV+L+P + D + KA+LE LR +++ LT
Sbjct: 149 MLESGKVSDMTKRPLVTIHAKRLPRGSYVRLRPLEAGY-DPEDWKALLERHLRENFTTLT 207
Query: 141 TGDTIMVPY-NNKKYYINVVETKP-STAVSIIETDCEVDF 178
G+ +++P N+ + V + +P + I++TD EVD
Sbjct: 208 LGELLLIPGPRNETFRFLVDKVEPQGDGICIVDTDLEVDI 247
>gi|258571631|ref|XP_002544619.1| hypothetical protein UREG_04136 [Uncinocarpus reesii 1704]
gi|237904889|gb|EEP79290.1| hypothetical protein UREG_04136 [Uncinocarpus reesii 1704]
Length = 183
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 37/54 (68%), Gaps = 7/54 (12%)
Query: 156 INVVETKPST---AVSIIETDCEVDFIPPLDFKEPEKPSS----SSLSNRTLPE 202
+ V+ETKP A+S++ETD EVDF PP+ ++EP++PS SSL++ LP
Sbjct: 1 MAVLETKPENPEKAISVLETDLEVDFAPPVGYEEPKRPSGTSTPSSLASAGLPH 54
>gi|146413296|ref|XP_001482619.1| hypothetical protein PGUG_05639 [Meyerozyma guilliermondii ATCC
6260]
Length = 651
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 16/158 (10%)
Query: 30 GDKIVMPPSAL----DRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWM 85
DK + PPS L DRL + +P++F L S + Y GV+EF A E I LP +
Sbjct: 16 SDKAIFPPSVLADVIDRLGD-DLPHPLIFRL--YSENQQIYVGVLEFSAPENAIILPEIV 72
Query: 86 MENMLLQ--EGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTL-RSYSCLTTG 142
+ L+ ++V + KG+ + L+P + + + N K LE+ L + Y+ LT
Sbjct: 73 FSKLSLEPVTAELV----VDIPKGTELSLKP-LQFYPQVHNWKFFLESRLPKLYTTLTKH 127
Query: 143 DTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIP 180
+ ++V N Y + VE + V I +T+ +D +P
Sbjct: 128 EKLLVEDENGVYEL-FVENLNANTVCITDTEMVLDVVP 164
>gi|71404671|ref|XP_805023.1| ubiquitin fusion degradation protein [Trypanosoma cruzi strain CL
Brener]
gi|70868264|gb|EAN83172.1| ubiquitin fusion degradation protein, putative [Trypanosoma cruzi]
Length = 187
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 25/152 (16%)
Query: 122 ISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVET-----KPSTAVSIIETDCE- 175
+S+P+ VL+ L Y LT G +IM+ Y ++ + I+V++ + A+S + D +
Sbjct: 1 LSDPRQVLKMHLSHYPVLTRGTSIMLHYLDRDFIIDVIDITDELDRSVDAISTVRADAQA 60
Query: 176 ----VDFIPPLDF----KEPEKPSSSSLSNRTLPEVKEEPPLDFKGP-----EKPSSSSL 222
V+F PLD E E P + E E P K P ++ S+
Sbjct: 61 TELKVEFERPLDMPLTPSENELPVQEGTNVIGTAEGVEFAPFVLKRPTIVKEKEEKSTET 120
Query: 223 SNRTPPEVKEEPPKKIAKFSPFTGSGRCLNGK 254
+NR E + F PFTG GR +N K
Sbjct: 121 TNR------EGKDQTKPGFVPFTGGGRRVNDK 146
>gi|302405264|ref|XP_003000469.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261361126|gb|EEY23554.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 763
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 64/156 (41%), Gaps = 32/156 (20%)
Query: 51 PMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMME------NMLLQEGDI-------- 96
P+ F L N G + G+ EF A+EG + L ++ME +M E D
Sbjct: 89 PLTFRLVNPINGNAVHAGIREFSAEEGQVALGPYLMEALGIDSSMFASESDTDSEAHMTS 148
Query: 97 --------VEVKNASLAKGSYVKLQPHTKDFLDISNP---KAVLETTLRSYSCLTTGDTI 145
+ + L KG+YV+L+P + NP K++LE LR T D +
Sbjct: 149 DQSKAYPRITIHAKYLPKGTYVRLRPLEAGY----NPDDWKSLLERQLRQSFTTLTKDAV 204
Query: 146 MVPYNNKKYYINVVETKPS---TAVSIIETDCEVDF 178
+ K + K S + +++TD EVD
Sbjct: 205 LAVRGVKGEQFQFLIDKFSPEGDGICVVDTDLEVDI 240
>gi|347840342|emb|CCD54914.1| similar to ubiquitin fusion degradation protein (Ufd1) [Botryotinia
fuckeliana]
Length = 792
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 91/238 (38%), Gaps = 90/238 (37%)
Query: 30 GDKIVMPPSALDRL---------------------------AYLHIE------------Y 50
GDKI++P SAL++L A IE +
Sbjct: 27 GDKILLPQSALEQLLSASTVTVNSNTRPSNVAFDPFNPYSLAAARIEQSQWRDTQQQLPH 86
Query: 51 PMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLL------------------- 91
P+ F L N+ G V Y G+ EF ADEG + L +++E + +
Sbjct: 87 PLTFRLVNSKNGNVVYAGIREFSADEGEVVLSPFLLEALGITAPLRNPTPPSSKVESRRG 146
Query: 92 ----------------------------QEGDIVEVKNASLAKGSYVKLQPHTKDFLDIS 123
+E + V L KG+YV+L+P + +
Sbjct: 147 SPDTPIDLTDNPAIDLTGDEMKDLTDETEEPAQITVHAKQLPKGTYVRLRPLEAGY-NPE 205
Query: 124 NPKAVLETTLR-SYSCLTTGDTIMVPYNNKKYYINVVE--TKPSTAVSIIETDCEVDF 178
+ K++LE +R +++ LT G+ + V + + + +++ AV +++TD EVD
Sbjct: 206 DWKSLLEKHMRENFTTLTKGEILTVRGSKSEEFRFLIDKFAPEGDAVCVVDTDLEVDI 263
>gi|358385791|gb|EHK23387.1| hypothetical protein TRIVIDRAFT_147517 [Trichoderma virens Gv29-8]
Length = 760
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 88/214 (41%), Gaps = 69/214 (32%)
Query: 30 GDKIVMPPSALDRL----------------------AYL----------HIEYPMLFELS 57
GDKI++PPSAL +L +YL + P++F L
Sbjct: 28 GDKIILPPSALQQLLSASSSRAATGSANGSNGYFGSSYLSSQSYGQETQQLPNPLIFRLV 87
Query: 58 NTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIV---------------EVKNA 102
N V Y G+ EF A EG I L ++E + + D V E KNA
Sbjct: 88 NPKNHNVVYAGIREFSAPEGTIGLSSLLLEALAIDSDDYVQTTPDVIDIEDPESLESKNA 147
Query: 103 S------------LAKGSYVKLQPHTKDFLDISNP---KAVLETTLR-SYSCLTTGDTIM 146
+ L KG+YV+L+P + NP K +LE LR +++ LT I
Sbjct: 148 ASGSSRITVHAVELQKGTYVRLRPLEAGY----NPDDWKPLLERQLRQNFTTLTKNTVIP 203
Query: 147 VPYNNKKYYINVVE--TKPSTAVSIIETDCEVDF 178
V + +++ +V+ + +I+TD EVD
Sbjct: 204 VQGSQGEHFKLLVDKFAPDGDGICVIDTDLEVDI 237
>gi|154273046|ref|XP_001537375.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150415887|gb|EDN11231.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 810
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 74/221 (33%)
Query: 30 GDKIVMPPSALDRL-----------AYLH------------------------------I 48
GDKI++PPSAL++L A+ H +
Sbjct: 29 GDKILLPPSALEQLLAAAPITSVESAHTHALTPQFDPFNPHTFAAERRARELFENRQQQL 88
Query: 49 EYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQE------GD------- 95
P+ F + N S GRV + G+ EF A E + L ++ +++ L + G+
Sbjct: 89 PNPLTFRIVNPSNGRVVHAGIREFSAQENEVGLSSFLRQSLGLDDVAFPSAGEESSSDVD 148
Query: 96 --------------IVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLR-SYSCLT 140
+V + L +GSYV+L+P + D + KA+LE LR +++ LT
Sbjct: 149 MPESGKVSNMSKRPLVTIHAKRLPRGSYVRLRPLEAGY-DPEDWKALLERHLRENFTTLT 207
Query: 141 TGDTIMVPY---NNKKYYINVVETKPSTAVSIIETDCEVDF 178
G+ +++P ++ ++ VE + + I++TD EVD
Sbjct: 208 LGELLLIPGPRDETFRFLVDKVEPQ-GDGICIVDTDLEVDI 247
>gi|154301107|ref|XP_001550967.1| hypothetical protein BC1G_10526 [Botryotinia fuckeliana B05.10]
Length = 749
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 91/241 (37%), Gaps = 96/241 (39%)
Query: 30 GDKIVMPPSALDRL---------------------------AYLHIE------------Y 50
GDKI++P SAL++L A IE +
Sbjct: 27 GDKILLPQSALEQLLSASTVTVNSNTRPSNVAFDPFNPYSLAAARIEQSQWRDTQQQLPH 86
Query: 51 PMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLL------------------- 91
P+ F L N+ G V Y G+ EF ADEG + L +++E + +
Sbjct: 87 PLTFRLVNSKNGNVVYAGIREFSADEGEVVLSPFLLEALGITAPLRNPTPPSSKVESRRG 146
Query: 92 ----------------------------QEGDIVEVKNASLAKGSYVKLQPHTKDFLDIS 123
+E + V L KG+YV+L+P +
Sbjct: 147 SPDTPIDLTDNPAIDLTGDEMIDLTDETEEPAQITVHAKQLPKGTYVRLRPLEAGY---- 202
Query: 124 NP---KAVLETTLR-SYSCLTTGDTIMVPYNNKKYYINVVE--TKPSTAVSIIETDCEVD 177
NP K++LE +R +++ LT G+ + V + + + +++ AV +++TD EVD
Sbjct: 203 NPEDWKSLLEKHMRENFTTLTKGEILTVRGSKSEEFRFLIDKFAPEGDAVCVVDTDLEVD 262
Query: 178 F 178
Sbjct: 263 I 263
>gi|255935971|ref|XP_002559012.1| Pc13g05780 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583632|emb|CAP91647.1| Pc13g05780 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 765
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 75/158 (47%), Gaps = 29/158 (18%)
Query: 50 YPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQE---------------- 93
+P++F + N GR Y G+ EF A+E + L + +++ +++
Sbjct: 86 HPLIFRIVNPLNGRFIYAGIREFSAEENEVALSTLLRDSLDIKDEEFLGENGEPQDPSAQ 145
Query: 94 ---------GDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLR-SYSCLTTGD 143
G V V L KG+YV+L+P + D + KA+LE LR +++ LTTG+
Sbjct: 146 VETEPSPRAGPAVTVHAKQLPKGTYVRLRPLEAGY-DPEDWKALLERYLRDNFTTLTTGE 204
Query: 144 TIMVPYNNKKYYINVVETK--PSTAVSIIETDCEVDFI 179
+ VP + + +V+ + +++TD EVD +
Sbjct: 205 LLTVPGTRSESFRFLVDKVFPEGEGICVVDTDLEVDIV 242
>gi|121714281|ref|XP_001274751.1| ubiquitin fusion degradation protein (Ufd1), putative [Aspergillus
clavatus NRRL 1]
gi|119402905|gb|EAW13325.1| ubiquitin fusion degradation protein (Ufd1), putative [Aspergillus
clavatus NRRL 1]
Length = 792
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 34/162 (20%)
Query: 50 YPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENM--------------LLQEGD 95
+P+ F L N GR Y G+ EF A+E I L ++ + + + G
Sbjct: 89 HPLTFRLVNPQNGRAIYAGIREFSAEEQQIGLSAFLRRALGIDDDQPSSQTNGQVTESGQ 148
Query: 96 IVEVKNA--------------SLAKGSYVKLQPHTKDFLDISNPKAVLETTLR-SYSCLT 140
+EV++A L KG+YV+L+P + D + KA+LE LR +++ LT
Sbjct: 149 SMEVEDAEKADTTVTITVHAKQLPKGTYVRLRPLEAGY-DPEDWKALLERHLRDNFTTLT 207
Query: 141 TGDTIMVPYNNK---KYYINVVETKPSTAVSIIETDCEVDFI 179
TG+ + V ++ ++ VE + + +++TD EVD +
Sbjct: 208 TGELLTVAGGRDEIFRFLVDRVEPE-GDGICVVDTDLEVDIV 248
>gi|425777742|gb|EKV15898.1| Ubiquitin fusion degradation protein (Ufd1), putative [Penicillium
digitatum PHI26]
gi|425782671|gb|EKV20568.1| Ubiquitin fusion degradation protein (Ufd1), putative [Penicillium
digitatum Pd1]
Length = 764
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 30/159 (18%)
Query: 50 YPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQE---------------- 93
+P++F + N GR Y G+ EF A+E + L + +++ +++
Sbjct: 86 HPLIFRIVNPLNGRFVYAGIREFSAEENEVALSTLLRKSLDIKDEEFLSEKGEPEGLAAS 145
Query: 94 ----------GDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLR-SYSCLTTG 142
G V V L KG+YV+L+P + D + KA+LE LR +++ LTTG
Sbjct: 146 QIERELSPRTGPTVTVHAKQLPKGTYVRLRPLEAGY-DPEDWKALLERYLRDNFTTLTTG 204
Query: 143 DTIMVPYNNKKYYINVVETK--PSTAVSIIETDCEVDFI 179
+ + VP + + +V+ + +++TD EVD +
Sbjct: 205 ELLTVPGTRSESFRFLVDKVFPEGEGICVVDTDLEVDIV 243
>gi|190348979|gb|EDK41541.2| hypothetical protein PGUG_05639 [Meyerozyma guilliermondii ATCC
6260]
Length = 651
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 78/156 (50%), Gaps = 12/156 (7%)
Query: 30 GDKIVMPPSAL----DRLAYLHIEYPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWM 85
DK + PPS L DRL + +P++F L S + Y GV+EF A E I LP +
Sbjct: 16 SDKAIFPPSVLADVIDRLGD-DLPHPLIFRL--YSENQQIYVGVLEFSAPENAIILPE-I 71
Query: 86 MENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTL-RSYSCLTTGDT 144
+ + L E E+ + KG+ + L+P + + + N K LE+ L + Y+ LT +
Sbjct: 72 VFSKLSSEPVTAELV-VDIPKGTELSLKP-LQFYPQVHNWKFFLESRLPKLYTTLTKHEK 129
Query: 145 IMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIP 180
++V N Y + VE + V I +T+ +D +P
Sbjct: 130 LLVEDENGVYEL-FVENLNANTVCITDTEMVLDVVP 164
>gi|219127746|ref|XP_002184090.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404321|gb|EEC44268.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 499
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Query: 96 IVEVKNASLAKGSYVKLQPHTK----DFLDISNPKAVLETTL-RSYSCLTTGDTIMVPYN 150
++EV L KG L P + F ++ + K VLE +L R+ + L+ GD + +
Sbjct: 267 LIEVSLVHLPKGQACTLVPTQEALKNGFHNLKDVKLVLEQSLIRTRATLSVGDLVHSWHR 326
Query: 151 NKKYYINVVETKPST--AVSIIETDCEVDF 178
KKY + V + PST AV I TD EV+F
Sbjct: 327 GKKYDLTVRDVAPSTFNAVLCINTDIEVEF 356
>gi|159490908|ref|XP_001703415.1| ubiquitin fusion degradation protein [Chlamydomonas reinhardtii]
gi|158280339|gb|EDP06097.1| ubiquitin fusion degradation protein [Chlamydomonas reinhardtii]
Length = 374
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 119 FLDISNPKA-VLETTLRSYSCLTTGDTIMV--PYNNKKYYINVVETKPSTAVSIIETDCE 175
L+ + P+ LE + + S L+ GD I V P +++ + V E P+ AVS+++TD
Sbjct: 174 VLEFTAPEGCALEAEMMTLSTLSEGDWITVHQPDTGREWPLRVQELLPAAAVSVLDTDLA 233
Query: 176 VDFIPPLDFKE 186
D +P L+ +E
Sbjct: 234 ADVVPSLEAEE 244
>gi|385301839|gb|EIF46001.1| ubiquitin fusion degradation protein [Dekkera bruxellensis
AWRI1499]
Length = 356
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 21/155 (13%)
Query: 31 DKIVMPPSALDRLA----YLHIE---YPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPY 83
DK+++P + L +L L+I+ +P++F LS S Y GV EFI+ EG I LP
Sbjct: 34 DKVLLPETVLXQLLNXQKXLNIKXLPHPLIFRLSTPS--NQCYAGVREFISSEGEIELPG 91
Query: 84 WMMENM-LLQEG----DIVEVKNASLAKGSYVKLQPHT--KDFLDISNPKAVLETTLRS- 135
+ + + +LQ+ IV++ N + + V L P F + K LE L S
Sbjct: 92 JLADKLGILQDAMSTPVIVQLVNEVKSAKTLV-LTPEMVYSQFTSDQDWKWFLEAKLTSL 150
Query: 136 YSCLTTGDTIMVPYNN---KKYYINVVETKPSTAV 167
Y+ LT GD +++ ++ + Y + V +T P V
Sbjct: 151 YTTLTQGDXLIIKDDSASLQIYKLKVSKTSPGRTV 185
>gi|18312110|ref|NP_558777.1| ATPase AAA [Pyrobaculum aerophilum str. IM2]
gi|18159541|gb|AAL62959.1| AAA family ATPase, possible cell division control protein cdc48
[Pyrobaculum aerophilum str. IM2]
Length = 731
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 19/185 (10%)
Query: 76 EGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRS 135
+G+I + + +N + + V+V+ ++VKL P + +N ++ LR
Sbjct: 62 KGVIRMNSILRKNADVSLNETVKVRRVEPKPAAFVKLAPVSMTIAVDANFLQYIKQRLRE 121
Query: 136 YSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEKPSSSSL 195
Y L GD + + ++ VV+TKPS V II D ++ EKP +
Sbjct: 122 Y-VLVEGDMLQIHVLSQPLTFQVVQTKPSNTVLIITEDTQIQIF--------EKP----V 168
Query: 196 SNRTLPEVKEEPPLDFKGPEKPSSS--SLSNRTPPEVKE---EPPKKIAKFSPFTGSGRC 250
S +P V E D + ++ L R P K EPPK I P G+G+
Sbjct: 169 SGVKIPHVTWEDIGDLEDAKQKIRELVELPLRHPELFKHLGIEPPKGILLIGP-PGTGKT 227
Query: 251 LNGKS 255
L K+
Sbjct: 228 LLAKA 232
>gi|374327646|ref|YP_005085846.1| AAA ATPase [Pyrobaculum sp. 1860]
gi|356642915|gb|AET33594.1| AAA family ATPase [Pyrobaculum sp. 1860]
Length = 731
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 19/185 (10%)
Query: 76 EGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRS 135
+G+I + + +N + + V+V+ ++VKL P + +N ++ LR
Sbjct: 62 KGVIRMNSILRKNADISLNETVKVRRVDPKPAAFVKLAPVSMTIAVDANFLQYIKQRLRE 121
Query: 136 YSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEKPSSSSL 195
Y L GD + + ++ VV+TKPS V II D ++ EKP +
Sbjct: 122 Y-VLVEGDMLQIYVLSQPLTFQVVQTKPSNTVLIITEDTQIQIF--------EKP----V 168
Query: 196 SNRTLPEVKEEPPLDFKGPEKPSSS--SLSNRTPPEVKE---EPPKKIAKFSPFTGSGRC 250
S +P V E D + ++ L R P K EPPK I P G+G+
Sbjct: 169 SGVKIPHVTWEDIGDLEDAKQKIRELVELPLRHPELFKHLGIEPPKGILLIGP-PGTGKT 227
Query: 251 LNGKS 255
L K+
Sbjct: 228 LLAKA 232
>gi|145592539|ref|YP_001154541.1| ATPase AAA [Pyrobaculum arsenaticum DSM 13514]
gi|145284307|gb|ABP51889.1| AAA family ATPase, CDC48 subfamily [Pyrobaculum arsenaticum DSM
13514]
Length = 731
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 79/185 (42%), Gaps = 19/185 (10%)
Query: 76 EGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRS 135
+G+I + + +N + + V+V+ ++VKL P + +N ++ LR
Sbjct: 62 KGVIRMNSILRKNADVSLNETVKVRRVEPKPAAFVKLAPVSMTIAVDANFLQYIKQRLRE 121
Query: 136 YSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEKPSSSSL 195
Y + GD + + ++ VV+TKPS A+ II D ++ EKP +
Sbjct: 122 Y-VVVEGDMLQIYVLSQPLTFQVVQTKPSNAILIITEDTQIQIF--------EKP----V 168
Query: 196 SNRTLPEVKEEPPLDFKGPEKPSSS--SLSNRTPPEVKE---EPPKKIAKFSPFTGSGRC 250
S +P V E D + ++ L R P K EPPK I P G+G+
Sbjct: 169 SGVKIPHVTWEDIGDLEDAKQKIRELVELPLRHPELFKHLGIEPPKGILLIGP-PGTGKT 227
Query: 251 LNGKS 255
L K+
Sbjct: 228 LLAKA 232
>gi|379005482|ref|YP_005261154.1| AAA ATPase [Pyrobaculum oguniense TE7]
gi|375160935|gb|AFA40547.1| AAA family ATPase, CDC48 subfamily [Pyrobaculum oguniense TE7]
Length = 731
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 79/185 (42%), Gaps = 19/185 (10%)
Query: 76 EGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRS 135
+G+I + + +N + + V+V+ ++VKL P + +N ++ LR
Sbjct: 62 KGVIRMNSILRKNADVSLNETVKVRRVEPKPAAFVKLAPVSMTIAVDANFLQYIKQRLRE 121
Query: 136 YSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEKPSSSSL 195
Y + GD + + ++ VV+TKPS A+ II D ++ EKP +
Sbjct: 122 Y-VVVEGDMLQIYVLSQPLTFQVVQTKPSNAILIITEDTQIQIF--------EKP----V 168
Query: 196 SNRTLPEVKEEPPLDFKGPEKPSSS--SLSNRTPPEVKE---EPPKKIAKFSPFTGSGRC 250
S +P V E D + ++ L R P K EPPK I P G+G+
Sbjct: 169 SGVKIPHVTWEDIGDLEDAKQKIRELVELPLRHPELFKHLGIEPPKGILLIGP-PGTGKT 227
Query: 251 LNGKS 255
L K+
Sbjct: 228 LLAKA 232
>gi|429328647|gb|AFZ80407.1| hypothetical protein BEWA_032600 [Babesia equi]
Length = 71
Score = 41.6 bits (96), Expect = 0.51, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 30/52 (57%)
Query: 53 LFELSNTSAGRVTYCGVMEFIADEGLIYLPYWMMENMLLQEGDIVEVKNASL 104
+FE+ N G++T+ GV+E I++EG +PYW D+ V+N +L
Sbjct: 1 MFEIKNPKNGKITHGGVLELISEEGCCNIPYWASHVRCSVLNDLKAVENIAL 52
>gi|357161823|ref|XP_003579214.1| PREDICTED: uncharacterized protein LOC100844828, partial
[Brachypodium distachyon]
Length = 2752
Score = 41.6 bits (96), Expect = 0.59, Method: Composition-based stats.
Identities = 42/163 (25%), Positives = 62/163 (38%), Gaps = 20/163 (12%)
Query: 180 PPLDFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIA 239
PPL +P +S + P L F+ PEK ++ S PP +E PP+
Sbjct: 14 PPLLAIQPSASASGLKRKQESPAPTPSSKLPFRTPEKAAARSRFGWAPPRAEELPPRMT- 72
Query: 240 KFSPFTGSGRCL--------NGKSSTQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQ 291
+P G+ G + T PT S + P N + G++GS+ S
Sbjct: 73 --TPRAHRGKAAAAPAASEGGGSAQTTPTKS-----VSKPAHNYSVGMSGSRQVVMSGGA 125
Query: 292 KSGKLVFGS--NANQSSNGTPKVLPKSSSGEPPQVE--EKPKF 330
+ G+ +A S G V +S E P E E P F
Sbjct: 126 RGLGFSTGARGSAGPVSFGQQPVTAVVNSVEVPHFELREDPSF 168
>gi|171186425|ref|YP_001795344.1| AAA ATPase [Pyrobaculum neutrophilum V24Sta]
gi|170935637|gb|ACB40898.1| AAA family ATPase, CDC48 subfamily [Pyrobaculum neutrophilum
V24Sta]
Length = 731
Score = 41.2 bits (95), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 77/184 (41%), Gaps = 19/184 (10%)
Query: 77 GLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSY 136
G+I + + +N + + V V+ ++VKL P + +N ++ LR Y
Sbjct: 63 GVIRMNSILRKNADVSLNETVRVRKVEPKPAAFVKLAPVSMTIAVDANFLQYIKQRLREY 122
Query: 137 SCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEKPSSSSLS 196
+ GD + + ++ VV+TKPS AV +I D ++ EKP +S
Sbjct: 123 -IVVEGDMLQIYVLSQPLTFQVVQTKPSNAVLVITEDTQIQIF--------EKP----VS 169
Query: 197 NRTLPEVKEEPPLDFKGPEKPSSS--SLSNRTPPEVKE---EPPKKIAKFSPFTGSGRCL 251
+P V E D + ++ L R P K EPPK I P G+G+ L
Sbjct: 170 GVRIPHVTWEDIGDLEDAKQKIRELVELPLRHPELFKHLGIEPPKGILLIGP-PGTGKTL 228
Query: 252 NGKS 255
K+
Sbjct: 229 LAKA 232
>gi|352681678|ref|YP_004892202.1| AAA family ATPase [Thermoproteus tenax Kra 1]
gi|350274477|emb|CCC81122.1| AAA family ATPase, possible cell division control protein cdc48
[Thermoproteus tenax Kra 1]
Length = 730
Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 75/189 (39%), Gaps = 27/189 (14%)
Query: 76 EGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRS 135
+G+I + + +N + + V+V+ VKL P + N ++ LR
Sbjct: 61 KGIIRMNSILRKNADVSLNETVKVRKVDPKPAQAVKLAPISMTIAVDQNFLQYIKQRLRD 120
Query: 136 YSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDF---------IPPLDFKE 186
Y L GD I + ++ VV+ +PS AV II D ++ IPP+ +++
Sbjct: 121 Y-VLVEGDVIQIYVLSQPLTFQVVQARPSNAVLIITDDTQLQIYEKPVSGVKIPPVTWED 179
Query: 187 PEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTG 246
+ R L E+ P FK + EPPK I F P G
Sbjct: 180 IGDLEEAKQKIRELVELPLRHPELFK----------------HLGIEPPKGILLFGP-PG 222
Query: 247 SGRCLNGKS 255
+G+ L K+
Sbjct: 223 TGKTLLAKA 231
>gi|119719222|ref|YP_919717.1| AAA family ATPase, CDC48 subfamily protein [Thermofilum pendens Hrk
5]
gi|119524342|gb|ABL77714.1| AAA family ATPase, CDC48 subfamily [Thermofilum pendens Hrk 5]
Length = 732
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 75/192 (39%), Gaps = 26/192 (13%)
Query: 77 GLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRSY 136
G+I + W +N + GD V+V+ A + +++L P + N A ++ L
Sbjct: 68 GIIRMDGWTRKNAGVSIGDKVKVRKAEVKPAQFIRLAPVSMTLAVDENFVAYVKKRLVDR 127
Query: 137 SCLTTGDTIMVPYNNKKYYINVVETKP--------STAVSIIETDCEVDFIPPLDFKEPE 188
+ GD I +P + + NVV KP T + I+E + IP + + +
Sbjct: 128 PIIE-GDVIQIPVLGQVIHFNVVNIKPKGVVVVTDKTQLKILERPVDTGKIPRVTYDDIG 186
Query: 189 KPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPPEVKEEPPKKIAKFSPFTGSG 248
+ R + E+ P FK + +PPK I + P G+G
Sbjct: 187 DLEEAKQKIREMVELPLRHPELFK----------------RLGIDPPKGILLYGP-PGTG 229
Query: 249 RCLNGKSSTQPT 260
+ L K+ T
Sbjct: 230 KTLLAKAVANET 241
>gi|126460718|ref|YP_001056996.1| ATPase AAA [Pyrobaculum calidifontis JCM 11548]
gi|126250439|gb|ABO09530.1| AAA family ATPase, CDC48 subfamily [Pyrobaculum calidifontis JCM
11548]
Length = 731
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 78/185 (42%), Gaps = 19/185 (10%)
Query: 76 EGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRS 135
+G+I + + +N + + V V+ ++VKL P + +N ++ LR
Sbjct: 62 KGVIRMNSILRKNADVALNETVRVRRVEPKPAAFVKLAPVSMTIAVDANFLQYIKQRLRE 121
Query: 136 YSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEKPSSSSL 195
Y + GD + + ++ V++TKPS ++ II D ++ EKP +
Sbjct: 122 Y-VVVEGDMLQIHVLSQPLTFQVIQTKPSNSIVIINDDTQIQIF--------EKP----V 168
Query: 196 SNRTLPEVKEEPPLDFKGPEKPSSS--SLSNRTPPEVKE---EPPKKIAKFSPFTGSGRC 250
S +P V E D + ++ L R P K EPPK I P G+G+
Sbjct: 169 SGVKIPHVTWEDIGDLEDAKQKIRELVELPLRHPELFKHLGIEPPKGILLIGP-PGTGKT 227
Query: 251 LNGKS 255
L K+
Sbjct: 228 LLAKA 232
>gi|238021964|ref|ZP_04602390.1| hypothetical protein GCWU000324_01869 [Kingella oralis ATCC 51147]
gi|237866578|gb|EEP67620.1| hypothetical protein GCWU000324_01869 [Kingella oralis ATCC 51147]
Length = 1220
Score = 40.4 bits (93), Expect = 1.1, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 10/94 (10%)
Query: 179 IPPLDFKEPEKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTPP-EVKEEPPKK 237
IPP ++ P+ S ++LS + + E PLD PS + + P +K + P
Sbjct: 938 IPPRSYRSPQHTSFTALSRHSTTQPTEHTPLD------PSEQTTQPQNPQGSLKPDDPPT 991
Query: 238 IAKFSPFTGSGRCLNGKSSTQPTVSPSS---PLI 268
IA+F T +G CL+ P P PLI
Sbjct: 992 IAQFPQGTAAGICLHSLLERYPFAQPGRQNLPLI 1025
>gi|255002756|ref|ZP_05277720.1| hypothetical protein AmarPR_00271 [Anaplasma marginale str. Puerto
Rico]
Length = 2102
Score = 40.4 bits (93), Expect = 1.3, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 14/116 (12%)
Query: 188 EKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTP--PEVKEEPPKKIAKFSPFT 245
+ P + P V E + G K + S S +P P+ +EPP+ A+ +P
Sbjct: 454 DTPQTPQPDEAAPPRVATENAPENAGDSKNGTGSTSTDSPQTPQPDKEPPRVAAENAP-E 512
Query: 246 GSGRCLNGKSSTQPTVSPSSPLID----------NPQQNAANGINGSKSSSASSRQ 291
+G NG ST PT SP +P D N NA + NG+ S+S S Q
Sbjct: 513 NAGDSKNGTGST-PTDSPQTPQPDEAAPPRVATENAPGNAGDSKNGTGSTSTDSPQ 567
>gi|222474787|ref|YP_002563202.1| hypothetical protein AMF_052 [Anaplasma marginale str. Florida]
gi|222418923|gb|ACM48946.1| Conserved hypothetical protein [Anaplasma marginale str. Florida]
Length = 2111
Score = 40.4 bits (93), Expect = 1.3, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 14/116 (12%)
Query: 188 EKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTP--PEVKEEPPKKIAKFSPFT 245
+ P + P V E + G K + S S +P P+ +EPP+ A+ +P
Sbjct: 463 DTPQTPQPDEAAPPRVATENAPENAGDSKNGTGSTSTDSPQTPQPDKEPPRVAAENAP-E 521
Query: 246 GSGRCLNGKSSTQPTVSPSSPLID----------NPQQNAANGINGSKSSSASSRQ 291
+G NG ST PT SP +P D N NA + NG+ S+S S Q
Sbjct: 522 NAGDSKNGTGST-PTDSPQTPQPDEAAPPRVATENAPGNAGDSKNGTGSTSTDSPQ 576
>gi|254994648|ref|ZP_05276838.1| hypothetical protein AmarM_00286 [Anaplasma marginale str.
Mississippi]
Length = 1972
Score = 40.0 bits (92), Expect = 1.4, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 14/116 (12%)
Query: 188 EKPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTP--PEVKEEPPKKIAKFSPFT 245
+ P + P V E + G K + S S +P P+ +EPP+ A+ +P
Sbjct: 324 DTPQTPQPDEAAPPRVATENAPENAGDSKNGTGSTSTDSPQTPQPDKEPPRVAAENAP-E 382
Query: 246 GSGRCLNGKSSTQPTVSPSSPLID----------NPQQNAANGINGSKSSSASSRQ 291
+G NG ST PT SP +P D N NA + NG+ S+S S Q
Sbjct: 383 NAGDSKNGTGST-PTDSPQTPQPDEAAPPRVATENAPGNAGDSKNGTGSTSTDSPQ 437
>gi|294656050|ref|XP_458281.2| DEHA2C13860p [Debaryomyces hansenii CBS767]
gi|199430816|emb|CAG86359.2| DEHA2C13860p [Debaryomyces hansenii CBS767]
Length = 712
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 9/124 (7%)
Query: 30 GDKIVMPPSALDRLAYLHIE----YPMLFELSNTSAGRVTYCGVMEFIADEGLIYLPYWM 85
D+ ++PPS L + + E +P++F + + Y GV EF ++EG I LP +
Sbjct: 22 SDRAILPPSVLSSIIDTYSESSLPHPLIFRAWHNNNS--CYIGVKEFSSNEGEILLPRII 79
Query: 86 MENMLLQEGDIVEVKNAS-LAKGSYVKLQPHTKDFLDISNPKAVLETTLRS-YSCLTTGD 143
+ + + D V V+ S + KG + L+P + + I N K LE+ L + Y+ LT
Sbjct: 80 TDKIGAENDDTVRVELVSNIPKGKSLTLKP-LQFYPQIHNWKFFLESKLTNFYTTLTKNS 138
Query: 144 TIMV 147
+ +
Sbjct: 139 ALYI 142
>gi|123457336|ref|XP_001316396.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121899101|gb|EAY04173.1| hypothetical protein TVAG_009810 [Trichomonas vaginalis G3]
Length = 74
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 119 FLDISNPKAVLETTLRSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDF 178
F IS+P VL LR + LT G + + + + Y + V++T+PS + I + +F
Sbjct: 5 FNKISDPVTVLSKRLRDFPVLTQGSILPIDFAKRIYKLRVLKTEPSDGILINNVNLNTEF 64
Query: 179 IPP 181
PP
Sbjct: 65 APP 67
>gi|124027197|ref|YP_001012517.1| ATPases of AAA+ class, SpoVK, putative cell division [Hyperthermus
butylicus DSM 5456]
gi|123977891|gb|ABM80172.1| ATPases of AAA+ class, SpoVK, putative cell division [Hyperthermus
butylicus DSM 5456]
Length = 737
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 79/187 (42%), Gaps = 18/187 (9%)
Query: 75 DEGLIYLPYWMMENMLLQEGDIVEVKNAS-LAKGSYVKLQPHTKDFLDISNPKAVLETTL 133
D +I + +M E + GD+V V+ A+ + + V L P P+ V E L
Sbjct: 70 DRNIIRIDGYMREAIGASVGDMVTVRKAANVQPATRVVLAPTEPIRFAADFPEYVKEYLL 129
Query: 134 RSYSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEKPSSS 193
R L G+T+++P + + VV T+PS V + D E++ E+P
Sbjct: 130 RK--PLARGETVVIPVFSTGLKLVVVSTQPSQFVYVTR-DTEIEI--------REEPVRE 178
Query: 194 SLSNRTLPEVKEEPPLDF-KGPEKPSSSSLSNRTPPEVKE----EPPKKIAKFSPFTGSG 248
+R +P V E D + EK PE+ E EPPK I + P G G
Sbjct: 179 ERIHRGIPRVTWEDIGDLEEAKEKIREIVELPMKHPELFEHLGIEPPKGILLYGP-PGVG 237
Query: 249 RCLNGKS 255
+ L K+
Sbjct: 238 KTLLAKA 244
>gi|422293759|gb|EKU21059.1| thermostable carboxypeptidase, partial [Nannochloropsis gaditana
CCMP526]
Length = 515
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 157 NVVETKPSTAVSIIETDCEVDFIPPLDFKEP 187
V++ +PS A IIETDC VDF P+ + EP
Sbjct: 30 QVLDVQPSEAACIIETDCNVDFEAPVGYVEP 60
>gi|119872197|ref|YP_930204.1| ATPase AAA [Pyrobaculum islandicum DSM 4184]
gi|119673605|gb|ABL87861.1| AAA family ATPase, CDC48 subfamily [Pyrobaculum islandicum DSM
4184]
Length = 731
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 19/185 (10%)
Query: 76 EGLIYLPYWMMENMLLQEGDIVEVKNASLAKGSYVKLQPHTKDFLDISNPKAVLETTLRS 135
+G+I + + +N + + V V+ ++VKL P + +N ++ LR
Sbjct: 62 KGVIRMNSILRKNADVTLNETVRVRKIEPKPAAFVKLAPVSMTIAVDTNFLQYIKQRLRE 121
Query: 136 YSCLTTGDTIMVPYNNKKYYINVVETKPSTAVSIIETDCEVDFIPPLDFKEPEKPSSSSL 195
Y + GD + + ++ VV+TKP+ AV +I D ++ EKP +
Sbjct: 122 Y-IVVEGDMLQIYVLSQPLTFQVVQTKPANAVLVITEDTQIQIF--------EKP----V 168
Query: 196 SNRTLPEVKEEPPLDFKGPEKPSSS--SLSNRTPPEVKE---EPPKKIAKFSPFTGSGRC 250
S +P V E D + ++ L R P K EPPK I P G+G+
Sbjct: 169 SGVRIPHVTWEDIGDLEDAKQKIRELVELPLRHPELFKHLGIEPPKGILLIGP-PGTGKT 227
Query: 251 LNGKS 255
L K+
Sbjct: 228 LLAKA 232
>gi|356522988|ref|XP_003530124.1| PREDICTED: probable receptor-like protein kinase At5g47070-like
[Glycine max]
Length = 430
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 189 KPSSSSLSNRTLPEVKEEPPLDFKGPEKPSSSSLSNRTP---PEVKEEPPKKIAKFS 242
+ S S R+ PE+KE+ L+F GPE+ + SS S+ +P PE+ EE + FS
Sbjct: 8 RDKSRSSKQRSAPELKEQEKLEFSGPERVTKSSCSSTSPRGIPELYEEKGHNLRDFS 64
>gi|357147942|ref|XP_003574556.1| PREDICTED: malate dehydrogenase, chloroplastic-like [Brachypodium
distachyon]
Length = 398
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 257 TQPTVSPSSPLIDNPQQNAANGINGSKSSSASSRQKSGKLVFGSNANQSSNGTPKVLPKS 316
T +VS + LI P+ + +G K+SS+S ++G G NA+ ++ TP+++PK+
Sbjct: 6 TISSVSAQAALISKPRNHGITSYSGLKASSSSISFETGSSFLGKNASLRASVTPRIVPKA 65
Query: 317 SSG 319
SG
Sbjct: 66 KSG 68
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.310 0.129 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,688,936,641
Number of Sequences: 23463169
Number of extensions: 248687864
Number of successful extensions: 795173
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 1883
Number of HSP's that attempted gapping in prelim test: 772537
Number of HSP's gapped (non-prelim): 15468
length of query: 342
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 199
effective length of database: 9,003,962,200
effective search space: 1791788477800
effective search space used: 1791788477800
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 77 (34.3 bits)