Query 047223
Match_columns 348
No_of_seqs 151 out of 1000
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 15:37:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047223.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047223hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1l5a_A Amide synthase, VIBH; n 99.5 1.2E-12 4.2E-17 127.8 25.1 222 38-311 81-309 (436)
2 2jgp_A Tyrocidine synthetase 3 99.5 2.2E-11 7.6E-16 122.0 28.7 238 12-310 159-404 (520)
3 2xhg_A Tyrocidine synthetase A 99.4 1.6E-10 5.5E-15 113.7 27.8 245 12-310 78-339 (466)
4 4hvm_A Tlmii; PSI-biology, mid 99.4 1.4E-11 4.9E-16 122.6 19.3 243 12-310 75-331 (493)
5 2vsq_A Surfactin synthetase su 99.4 4E-11 1.4E-15 133.2 23.2 240 12-310 76-331 (1304)
6 1q9j_A PAPA5, polyketide synth 99.3 3.6E-11 1.2E-15 116.6 15.9 205 51-310 94-317 (422)
7 3fot_A 15-O-acetyltransferase; 98.5 2.2E-05 7.4E-10 79.2 24.2 164 60-258 155-346 (519)
8 2bgh_A Vinorine synthase; VS, 97.2 0.033 1.1E-06 54.1 19.6 180 58-305 136-322 (421)
9 4g22_A Hydroxycinnamoyl-COA sh 96.4 0.036 1.2E-06 54.1 13.5 79 182-288 233-318 (439)
10 2xr7_A Malonyltransferase; xen 96.3 0.09 3.1E-06 51.4 15.6 89 177-288 240-333 (453)
11 2rkv_A Trichothecene 3-O-acety 96.1 0.059 2E-06 52.6 12.9 79 182-288 233-320 (451)
12 2e1v_A Acyl transferase; BAHD 95.3 1.2 4.1E-05 43.3 18.7 76 182-288 248-331 (454)
13 1baz_A ARC repressor; transcri 46.8 25 0.00085 23.4 4.0 27 188-214 20-46 (53)
14 2i9d_A Chloramphenicol acetylt 44.4 17 0.00059 31.7 3.7 96 180-309 31-127 (217)
15 3qoq_A Alginate and motility r 43.3 28 0.00097 24.7 4.0 28 187-214 31-58 (69)
16 3cla_A Type III chloramphenico 40.5 13 0.00046 32.2 2.3 25 77-101 182-206 (213)
17 1q23_A Chloramphenicol acetylt 39.5 18 0.00063 31.5 3.1 38 180-217 34-71 (219)
18 1taf_B TFIID TBP associated fa 38.5 55 0.0019 23.2 4.9 38 183-220 5-43 (70)
19 2i9d_A Chloramphenicol acetylt 38.4 15 0.00052 32.1 2.3 24 77-100 190-213 (217)
20 1q23_A Chloramphenicol acetylt 38.4 15 0.00052 32.1 2.3 25 77-101 186-210 (219)
21 1nla_A Transcriptional repress 38.0 38 0.0013 23.6 3.9 28 188-215 20-47 (64)
22 2gpe_A Bifunctional protein PU 37.8 43 0.0015 21.6 4.1 32 186-221 14-45 (52)
23 3rqc_A Probable lipoamide acyl 36.8 17 0.00057 31.9 2.4 30 78-107 189-218 (224)
24 3cla_A Type III chloramphenico 36.8 20 0.00068 31.1 2.8 38 180-217 29-66 (213)
25 1p94_A Plasmid partition prote 36.1 38 0.0013 24.5 3.8 30 187-220 46-75 (76)
26 2hue_C Histone H4; mini beta s 34.9 43 0.0015 24.5 4.0 37 184-220 10-47 (84)
27 2k9i_A Plasmid PRN1, complete 32.8 56 0.0019 21.0 4.1 36 182-221 13-51 (55)
28 1id3_B Histone H4; nucleosome 31.4 50 0.0017 25.1 4.0 39 183-221 27-66 (102)
29 2an7_A Protein PARD; bacterial 31.4 28 0.00097 25.5 2.4 22 188-209 14-35 (83)
30 1scz_A E2, dihydrolipoamide su 29.8 18 0.00063 31.8 1.4 24 78-101 198-221 (233)
31 3b8k_A PDCE2;, dihydrolipoylly 28.8 23 0.0008 31.2 2.0 25 77-101 205-229 (239)
32 1dpb_A Dihydrolipoyl-transacet 28.5 27 0.00093 30.9 2.3 25 77-101 209-233 (243)
33 3rqc_A Probable lipoamide acyl 26.8 62 0.0021 28.1 4.4 39 180-218 33-76 (224)
34 2ii3_A Lipoamide acyltransfera 25.7 32 0.0011 30.8 2.3 25 77-101 225-249 (262)
35 3t76_A VANU, transcriptional r 23.7 28 0.00097 25.5 1.3 21 185-205 63-83 (88)
36 2kel_A SVTR protein, uncharact 22.6 1.1E+02 0.0038 20.5 4.0 34 183-220 18-54 (56)
37 3mae_A 2-oxoisovalerate dehydr 22.3 33 0.0011 30.7 1.7 30 78-107 212-241 (256)
38 2yfw_B Histone H4, H4; cell cy 22.0 96 0.0033 23.5 4.1 39 183-221 28-67 (103)
39 2bsq_E FITA, trafficking prote 21.3 1E+02 0.0034 22.2 3.8 27 188-214 14-40 (77)
40 3b8k_A PDCE2;, dihydrolipoylly 21.2 73 0.0025 27.9 3.7 36 181-216 40-83 (239)
41 1tzy_D Histone H4-VI; histone- 20.2 1.1E+02 0.0037 23.2 4.0 38 184-221 29-67 (103)
42 1scz_A E2, dihydrolipoamide su 20.1 98 0.0033 27.0 4.3 38 180-217 31-78 (233)
No 1
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=99.55 E-value=1.2e-12 Score=127.83 Aligned_cols=222 Identities=12% Similarity=-0.025 Sum_probs=138.4
Q ss_pred CCHHHHHHHHHHHHcCCCCCCC-CcEEEEEecccCCCCeeEEEEeecccccCcccHHHHHHHHhccCCC---CCCCCCCC
Q 047223 38 NPDQFIEDYISYITTNPMDYSK-PLWEVHLLNVKTSDAEAVGVFRIHHSIGDGASLISLLLACTRKTSD---TEALPTIP 113 (348)
Q Consensus 38 ~~~~~l~~~i~~~~~~pld~~~-PlW~~~li~~~~~~~~~~v~~r~HHal~DG~s~~~~~~~l~~~~~~---p~~~p~~p 113 (348)
+.++++.+++.+...+|||..+ |+|++.+++. +++++.+++.+||+++||+|...++.++...... ....+ .+
T Consensus 81 ~~~~~~~~~~~~~~~~~fdl~~~pl~r~~l~~~--~~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~~~~~g~~~~-~~ 157 (436)
T 1l5a_A 81 EAEPLAWRQIEQDLQRSSTLIDAPITSHQVYRL--SHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQSLLSGQTPT-AA 157 (436)
T ss_dssp THHHHHHHHHHHHHTSCCCCBTSCSCEEEEEEE--ETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHHHHTCCCC-CC
T ss_pred CHHHHHHHHHHHHhcCCCCcCCCCCeEEEEEEE--cCCEEEEEEeehhheecHhHHHHHHHHHHHHHHHHhcCCCCC-CC
Confidence 3466799999999999999966 9999999984 2578999999999999999999998887753211 11111 01
Q ss_pred CCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCcCCCCCCCCCeEEEEEeeC---hhHH
Q 047223 114 VQKRGGSSTATAGWFCWWLLLAIWSAIRLIWNTIADLVTFLATVLFLKDTENPLKGGPGVELVPKRFVHRTIG---LDDI 190 (348)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~t~~~~~~~~~~~~r~~~~~~~~---l~~v 190 (348)
. . . ...++.+........ .......+....+....+...+..+..............++ .+.+
T Consensus 158 ~----~------~--~~~~~~~~~~~~~~~--~~~~~~~~W~~~l~~~~~~~~lp~~~~~~~~~~~~~~~~l~~~~~~~l 223 (436)
T 1l5a_A 158 F----K------P--YQSYLEEEAAYLTSH--RYWQDKQFWQGYLREAPDLTLTSATYDPQLSHAVSLSYTLNSQLNHLL 223 (436)
T ss_dssp C----C------C--HHHHHHHHHHHHTSH--HHHHHHHHHHHHHHTSCCCCBCCTTCCGGGCCEEEEEEECCHHHHHHH
T ss_pred c----c------C--HHHHHHHHHHhhccH--hHHHHHHHHHHHhcCCCCcccCCCCCCCCcccceeeEEecCHHHHHHH
Confidence 0 0 0 011111111100000 00000001111111111112222211110001112233454 4578
Q ss_pred HHHHHHcCCcchHHHHHHHHHHHHHHHHhhcCCcccccCCCccCCCCCCCCCCceEEEEEeeecCCCchhhHHHHhhhcC
Q 047223 191 KLVKNAMNMTINDVILGLTQAALSRYLHRRYGDKAMQNGGAKRESNNTPPKNLRLRAAILVNLRPTTGIQALADMMAKES 270 (348)
Q Consensus 191 k~ia~~~g~TvNDVlla~~agAL~~yl~~~g~~~~~~~~~~~~~~~~~~p~~~~l~a~vPVslR~~~~~~~~~~~~~~~~ 270 (348)
+++|+++|+|++++++|+++..|++|.. + .+.+.+|++-|...+.
T Consensus 224 ~~~a~~~~~t~~~~l~aa~~~~L~~~~g----~--------------------dv~ig~~~~~R~~~~~----------- 268 (436)
T 1l5a_A 224 LKLANANQIGWPDALVALCALYLESAEP----D--------------------APWLWLPFMNRWGSVA----------- 268 (436)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHST----T--------------------CCEEEEEECCCTTSGG-----------
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHhhC----C--------------------ceEEeeecccCCChHH-----------
Confidence 8889999999999999999999998852 1 4788999999986443
Q ss_pred CCCCCceEEEEEeecccCCCCCHHHHHHHHHHHHHHHhhhh
Q 047223 271 KGGWGNWIGYILLPFTIALQNDPLDYIRVAKATIDRRKHSL 311 (348)
Q Consensus 271 ~~~~gN~~s~~~v~Lp~~~~~dp~eRL~~v~~~~~~~K~s~ 311 (348)
....|+.+..+.+.+.++...+..+.|+++++.+.......
T Consensus 269 ~~~vG~f~n~lplr~~~~~~~t~~~~l~~v~~~~~~~~~h~ 309 (436)
T 1l5a_A 269 ANVPGLMVNSLPLLRLSAQQTSLGNYLKQSGQAIRSLYLHG 309 (436)
T ss_dssp GGSCSCCCEEEEEECCCCTTCBHHHHHHHHHHHHHHHHHTT
T ss_pred hcCcceEEEEEEEEEecCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 23689999999998888644678999999999888766543
No 2
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=99.48 E-value=2.2e-11 Score=122.02 Aligned_cols=238 Identities=13% Similarity=0.090 Sum_probs=146.0
Q ss_pred CCceEEe-cccccCCcEEeccCCCCCCCCHHHHHHHHHHHHcCCCCCC-CCcEEEEEecccCCCCeeEEEEeecccccCc
Q 047223 12 KKKKWTR-TTVNVENHVIVPELDPKMENPDQFIEDYISYITTNPMDYS-KPLWEVHLLNVKTSDAEAVGVFRIHHSIGDG 89 (348)
Q Consensus 12 g~p~W~~-~~~Dl~~HV~~~~l~~~~~~~~~~l~~~i~~~~~~pld~~-~PlW~~~li~~~~~~~~~~v~~r~HHal~DG 89 (348)
|.|+++. ++.++.-++. .+ +++++.+ +.+...++||.. .|+|++.+++. +++++.+++.+||+++||
T Consensus 159 ~~~~q~v~~~~~~~~~~~--~~------~~~~~~~-~~~~~~~~fdl~~~pl~r~~l~~~--~~~~~~l~~~~HH~i~Dg 227 (520)
T 2jgp_A 159 GEPVQNIHEDVPFALAYS--EV------TEEEARE-LVSSLVQPFDLEVAPLIRVSLLKI--GEDRYVLFTDMHHSISDG 227 (520)
T ss_dssp TEEEEEECSCCCCCCEEE--EC------CHHHHHH-HHHHTCCCCCTTSSCCEEEEEEEE--ETTEEEEEEEEBGGGCCH
T ss_pred CEEEEEECCCCCCceEEE--eC------CHHHHHH-HHHHhcCCCCCCCCcceeEEEEEE--cCCcEEEEEEccceeecH
Confidence 4566665 5544433332 33 2355666 777788999986 59999999985 257899999999999999
Q ss_pred ccHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCc-
Q 047223 90 ASLISLLLACTRKTSDTEALPTIPVQKRGGSSTATAGWFCWWLLLAIWSAIRLIWNTIADLVTFLATVLFLKDTENPLK- 168 (348)
Q Consensus 90 ~s~~~~~~~l~~~~~~p~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~t~~~- 168 (348)
+|...++.++....... ..|..+ . . ...+..+....... ........+....+....+..++.
T Consensus 228 ~S~~~l~~el~~~Y~~~-~l~~~~---------~--~--~~d~~~~~~~~~~~--~~~~~~~~yW~~~l~~~~~~~~lp~ 291 (520)
T 2jgp_A 228 VSSGILLAEWVQLYQGD-VLPELR---------I--Q--YKDFAVWQQEFSQS--AAFHKQEAYWLQTFADDIPVLNLPT 291 (520)
T ss_dssp HHHHHHHHHHHHHHTTC-CCCCCS---------C--C--HHHHHHHHHHHTTS--HHHHHHHHHHHHHTSSCCCCCCCCC
T ss_pred hHHHHHHHHHHHHHccC-CCCCCC---------C--C--HHHHHHHHHHhhcC--hhhHHHHHHHHHHhCCCCCcCCCCC
Confidence 99999999887643221 111100 0 0 11222111111000 000000011111111111212221
Q ss_pred -CCCCC-CCCCeEEEEEeeC---hhHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcCCcccccCCCccCCCCCCCCCC
Q 047223 169 -GGPGV-ELVPKRFVHRTIG---LDDIKLVKNAMNMTINDVILGLTQAALSRYLHRRYGDKAMQNGGAKRESNNTPPKNL 243 (348)
Q Consensus 169 -~~~~~-~~~~r~~~~~~~~---l~~vk~ia~~~g~TvNDVlla~~agAL~~yl~~~g~~~~~~~~~~~~~~~~~~p~~~ 243 (348)
.+... ...........++ .+.++++|+++|+|++++++|+.+..|++|. |. +
T Consensus 292 ~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~~~T~~~~l~aa~a~~L~~~~---~~------------------~-- 348 (520)
T 2jgp_A 292 DFTRPSTQSFAGDQCTIGAGKALTEGLHQLAQATGTTLYMVLLAAYNVLLAKYA---GQ------------------E-- 348 (520)
T ss_dssp SSCCCSSCCCBEEEEEEECCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH---TC------------------S--
T ss_pred CCCCCCCCCCCccEEEEeCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc---CC------------------C--
Confidence 11111 0011122234455 5678889999999999999999999999996 42 1
Q ss_pred ceEEEEEeeecCCCchhhHHHHhhhcCCCCCCceEEEEEeecccCCCCCHHHHHHHHHHHHHHHhhh
Q 047223 244 RLRAAILVNLRPTTGIQALADMMAKESKGGWGNWIGYILLPFTIALQNDPLDYIRVAKATIDRRKHS 310 (348)
Q Consensus 244 ~l~a~vPVslR~~~~~~~~~~~~~~~~~~~~gN~~s~~~v~Lp~~~~~dp~eRL~~v~~~~~~~K~s 310 (348)
.+.+.+|++-|...+. ....|+.+..+.+.+.++...+..+.|+++++.+......
T Consensus 349 dv~~g~~~~gR~~~~~-----------~~~vG~f~n~lplr~~~~~~~~~~~~l~~v~~~~~~~~~h 404 (520)
T 2jgp_A 349 DIIVGTPITGRSHADL-----------EPIVGMFVNTLAMRNKPQREKTFSEFLQEVKQNALDAYGH 404 (520)
T ss_dssp CEEEEEEECCCCSGGG-----------TTCCSCCCEEEEEEECCCTTSBHHHHHHHHHHHHHHHHHT
T ss_pred CeEEEeccCCCCchhh-----------hccEEeeeeeeeEEecCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 5899999999986432 3468999999999888764567899999999988776544
No 3
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=99.40 E-value=1.6e-10 Score=113.67 Aligned_cols=245 Identities=13% Similarity=0.076 Sum_probs=144.7
Q ss_pred CCceEEe-cccccCCcEEeccCCCCCCCCHHHHHHHHHHHHcCCCCCCC-CcEEEEEecccCCCCeeEEEEeecccccCc
Q 047223 12 KKKKWTR-TTVNVENHVIVPELDPKMENPDQFIEDYISYITTNPMDYSK-PLWEVHLLNVKTSDAEAVGVFRIHHSIGDG 89 (348)
Q Consensus 12 g~p~W~~-~~~Dl~~HV~~~~l~~~~~~~~~~l~~~i~~~~~~pld~~~-PlW~~~li~~~~~~~~~~v~~r~HHal~DG 89 (348)
|.|+++. +..+...++....+. +. .+.++..+.+.+...++||..+ |+|++.+++. +++++ +++.+||+++||
T Consensus 78 ~~~~q~v~~~~~~~~~~~~~d~~-~~-~~~~~~~~~~~~~~~~~fdl~~~pl~r~~l~~~--~~~~~-l~l~~HH~i~Dg 152 (466)
T 2xhg_A 78 GNVVQHNRGLGGQLYDFFSYNLT-AQ-PDVQQAIEAETQRLHSSMNLQEGPLVKVALFQT--LHGDH-LFLAIHHLVVDG 152 (466)
T ss_dssp GCCEEEECCSSSCCCEEEEEECT-TC-SCHHHHHHHHHHHHHTTCCTTTCCCEEEEEEEE--TTEEE-EEEEEEGGGCCH
T ss_pred CceeeeccccccccceeEEEecC-Cc-ccHHHHHHHHHHHHHhccCCCCCCeEEEEEEEc--CCCCE-EEEEeeeeeech
Confidence 4567766 444566677776775 32 2334444445566789999976 9999999985 23444 889999999999
Q ss_pred ccHHHHHHHHhccCCC--CCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHhhc
Q 047223 90 ASLISLLLACTRKTSD--TEALPTIPVQKRGGSSTATAGWFCWWLLLAIWSAI--------RLIWNTIADLVTFLATVLF 159 (348)
Q Consensus 90 ~s~~~~~~~l~~~~~~--p~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 159 (348)
+|...++.++...... ....+..+. . . . . ...+..+..... ..-|... +..
T Consensus 153 ~S~~~l~~el~~~Y~~~~~g~~~~l~~--~-~---~--~--y~~~~~~~~~~~~~~~~~~~~~~W~~~------l~~--- 213 (466)
T 2xhg_A 153 ISWRILFEDLATGYAQALAGQAISLPE--K-T---D--S--FQSWSQWLQEYANEADLLSEIPYWESL------ESQ--- 213 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCCCC--C-C---S--C--HHHHHHHHHHHTTSHHHHTTHHHHHHH------HHH---
T ss_pred hhHHHHHHHHHHHHHHHHcCCCCCCCC--C-C---C--C--HHHHHHHHHHHhcCccchhhhHHHHHh------hcc---
Confidence 9999998887653210 000111111 0 0 0 0 112221111110 1112111 111
Q ss_pred CCCCCCCCcCCCCC-CCCCeEEEEEeeChhHHHHH---H-HHcCCcchHHHHHHHHHHHHHHHHhhcCCcccccCCCccC
Q 047223 160 LKDTENPLKGGPGV-ELVPKRFVHRTIGLDDIKLV---K-NAMNMTINDVILGLTQAALSRYLHRRYGDKAMQNGGAKRE 234 (348)
Q Consensus 160 ~~~p~t~~~~~~~~-~~~~r~~~~~~~~l~~vk~i---a-~~~g~TvNDVlla~~agAL~~yl~~~g~~~~~~~~~~~~~ 234 (348)
.+.+.-|...+... ...........++-+...++ + +++|+|++++++|+++.+|++|. |.
T Consensus 214 ~~~~~lp~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~t~~~~llaa~~~~l~~~~---~~------------ 278 (466)
T 2xhg_A 214 AKNVSLPKDYEVTDCKQKSVRNMRIRLHPEETEQLLKHANQAYQTEINDLLLAALGLAFAEWS---KL------------ 278 (466)
T ss_dssp CCCCCCCCSSCCSSCBGGGEEEEEEECCHHHHHHHHHTGGGTTTCCHHHHHHHHHHHHHHHHH---CC------------
T ss_pred CCcccCCccccccccccccceEEEEEcCHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHh---CC------------
Confidence 11111222211111 00111233456776665554 3 45799999999999999999985 42
Q ss_pred CCCCCCCCCceEEEEEeeecCCCchhhHHHHhhhcCCCCCCceEEEEEeecccCCCCCHHHHHHHHHHHHHHHhhh
Q 047223 235 SNNTPPKNLRLRAAILVNLRPTTGIQALADMMAKESKGGWGNWIGYILLPFTIALQNDPLDYIRVAKATIDRRKHS 310 (348)
Q Consensus 235 ~~~~~p~~~~l~a~vPVslR~~~~~~~~~~~~~~~~~~~~gN~~s~~~v~Lp~~~~~dp~eRL~~v~~~~~~~K~s 310 (348)
..+.+.+|++-|...... ++.....|+.+..+.+.+.++...++.+.|++|++.+..+++.
T Consensus 279 --------~dv~ig~~~~gR~~~~~~-------~~~~~~vG~f~n~lplr~~~~~~~~~~~~l~~v~~~~~~~~~~ 339 (466)
T 2xhg_A 279 --------AQIVIHLEGHGREDIIEQ-------ANVARTVGWFTSQYPVLLDLKQTAPLSDYIKLTKENMRKIPRK 339 (466)
T ss_dssp --------SEEEEEEEECCCCSCSTT-------CCCTTCCSCCCEEEEEEEECSCCCSHHHHHHHHHHHHHHSGGG
T ss_pred --------CceEEEecCCCCCccccC-------CCccccccceeeeccEEEecCCCCCHHHHHHHHHHHHHhCccC
Confidence 158999999999863100 0013468999888888888764568999999999998876543
No 4
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=99.39 E-value=1.4e-11 Score=122.63 Aligned_cols=243 Identities=14% Similarity=0.013 Sum_probs=136.8
Q ss_pred CCceEEecccccCCcEEeccCCCCCCCCHHHHHHHHHHHHcCCCCCCC-CcEEEEEecccCCCCeeEEEEeecccccCcc
Q 047223 12 KKKKWTRTTVNVENHVIVPELDPKMENPDQFIEDYISYITTNPMDYSK-PLWEVHLLNVKTSDAEAVGVFRIHHSIGDGA 90 (348)
Q Consensus 12 g~p~W~~~~~Dl~~HV~~~~l~~~~~~~~~~l~~~i~~~~~~pld~~~-PlW~~~li~~~~~~~~~~v~~r~HHal~DG~ 90 (348)
|.|+++.+.. + .+.+..+...+ ..++++.+++.+...++||..+ |+|++.+++. +++++.+++.+||+++||+
T Consensus 75 ~~~~~v~~~~-~--~~~~~d~~~~~-~~~~~~~~~~~~~~~~~fdl~~~pl~r~~l~~~--~~~~~~l~l~~HH~i~Dg~ 148 (493)
T 4hvm_A 75 GLWMRTRENA-D--ALVRSDLRGHP-DPQARCVELLRADRDRPTDPERDPLVRLHLVRL--SETDVVLGVVAHQMLLDAR 148 (493)
T ss_dssp SEEEEECSCC-C--CEEEEECTTSS-SHHHHHHHHHHHHHSSCCCTTTSCSEEEEEEEC--SSSEEEEEEEEETTTCCHH
T ss_pred CEEEEecCCC-C--CceEEECCCCC-chHHHHHHHHHHHhcCCCCCCCCCeEEEEEEEE--CCCcEEEEEecchhhccHH
Confidence 4566333444 3 34444554121 3347899999999999999976 9999999985 3578899999999999999
Q ss_pred cHHHHHHHHhccCCCCCCCC-CCCCCCCCCCC--CcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 047223 91 SLISLLLACTRKTSDTEALP-TIPVQKRGGSS--TATAGWFCWWLLLAIWSAIRLIWNTIADLVTFLATVLFLKDTENPL 167 (348)
Q Consensus 91 s~~~~~~~l~~~~~~p~~~p-~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~t~~ 167 (348)
|...++.++.... .....+ ....-...... ..... . ...-..-|.. .+....+....
T Consensus 149 S~~~l~~~l~~~Y-~g~~~~~~~~~~~~~~~~~~~~~~~----~-----~~~~~~~W~~----------~l~~~~~l~~~ 208 (493)
T 4hvm_A 149 SRYMVLGAVWQAY-YGRFRPAQYRDFAEVADFHPLDRET----V-----RVARHRWWSR----------RLPALPVRGGD 208 (493)
T ss_dssp HHHHHHHHHHHHH-TTCCCGGGSBCGGGTTTCCTTCSHH----H-----HHHHHHHHHH----------HGGGSCCCC--
T ss_pred HHHHHHHHHHHHh-CCCCCCcCHHHHHHHHhhhhcccCh----h-----hHHHHHHHHH----------hccCCCCCCCC
Confidence 9999999987643 111111 11000000000 00000 0 0000111211 11001110111
Q ss_pred cCCCCCCCCCeEEEEEeeChhHHHHHHHHcCCc--chHHHHHHHHHHHHHHHH------hhcCCcccccCCCccCCCCCC
Q 047223 168 KGGPGVELVPKRFVHRTIGLDDIKLVKNAMNMT--INDVILGLTQAALSRYLH------RRYGDKAMQNGGAKRESNNTP 239 (348)
Q Consensus 168 ~~~~~~~~~~r~~~~~~~~l~~vk~ia~~~g~T--vNDVlla~~agAL~~yl~------~~g~~~~~~~~~~~~~~~~~~ 239 (348)
..+... .....+....-..+.++++|+++|+| ++++++|+++.+|++|.. ..+.
T Consensus 209 ~~~~~~-~~~~~~~l~~~~~~~l~~~a~~~~vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~~----------------- 270 (493)
T 4hvm_A 209 GGPVGP-PETSRLRVPGSRWQALTEPGGPLGGNGSLAMAALTAWWLWTQGAGTGTDTGAGTGT----------------- 270 (493)
T ss_dssp -----C-CEEEEEEEEHHHHHHHHCC------CHHHHHHHHHHHHHHHC-------------------------------
T ss_pred CCCCCC-CeeEEEEcCHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHhhhcccccccCcC-----------------
Confidence 111110 00112222223345577778999999 999999999999999921 1111
Q ss_pred CCCCceEEEEEeeecCCCchhhHHHHhhhcCCCCCCceEEEEEeecccCC--CCCHHHHHHHHHHHHHHHhhh
Q 047223 240 PKNLRLRAAILVNLRPTTGIQALADMMAKESKGGWGNWIGYILLPFTIAL--QNDPLDYIRVAKATIDRRKHS 310 (348)
Q Consensus 240 p~~~~l~a~vPVslR~~~~~~~~~~~~~~~~~~~~gN~~s~~~v~Lp~~~--~~dp~eRL~~v~~~~~~~K~s 310 (348)
-. ..+.+.+|++-|...+. ....|+.+..+.+.+.++. ..++.+.|+++++.+......
T Consensus 271 g~-~dv~~g~~~~gR~~~~~-----------~~~vG~f~n~lplr~~~~~~~~~t~~~~l~~v~~~~~~~~~h 331 (493)
T 4hvm_A 271 GK-DSLYLSTEVDLRDHLQL-----------GSVVGPLTDRVVFGVDLTGLREPSFRDLMSRTQAGFLDAVVH 331 (493)
T ss_dssp ---CEEEEEEEEEHHHHTTC-----------CSBCSCCEEEEEEEEECTTCSSCBHHHHHHHHHHHHHHHHHT
T ss_pred CC-CCEEEEeeccCCCCcch-----------hcCeEeeeceeEEEEecCCCcCCCHHHHHHHHHHHHHHHHhh
Confidence 11 26999999999975332 3468999999888888864 467999999999988887666
No 5
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=99.36 E-value=4e-11 Score=133.20 Aligned_cols=240 Identities=11% Similarity=0.054 Sum_probs=147.2
Q ss_pred CCceEEe-cccccCCcEEeccCCCCCC-CCHHHHHHHHHHHHcCCCCCCC-CcEEEEEecccCCCCeeEEEEeecccccC
Q 047223 12 KKKKWTR-TTVNVENHVIVPELDPKME-NPDQFIEDYISYITTNPMDYSK-PLWEVHLLNVKTSDAEAVGVFRIHHSIGD 88 (348)
Q Consensus 12 g~p~W~~-~~~Dl~~HV~~~~l~~~~~-~~~~~l~~~i~~~~~~pld~~~-PlW~~~li~~~~~~~~~~v~~r~HHal~D 88 (348)
+.|+++- +..++.-++ ..+...+. +.++++.+++.+...++||..+ |||++.+++. +++++.+++.+||+++|
T Consensus 76 ~~p~Q~v~~~~~~~~~~--~d~~~~~~~~~~~~~~~~~~~~~~~~fdl~~~pl~r~~l~~~--~~~~~~l~~~~HHii~D 151 (1304)
T 2vsq_A 76 KRPVQVVLKKRQFHIEE--IDLTHLTGSEQTAKINEYKEQDKIRGFDLTRDIPMRAAIFKK--AEESFEWVWSYHHIILD 151 (1304)
T ss_dssp SSCEEEEESCCCCCEEE--EECTTSCHHHHHHHHHHHHHHHHHHCCCTTTSCSEEEEEEEE--ETTEEEEEEEEEGGGCC
T ss_pred CeEEEEECCCCCCceEE--EECCCCCchhHHHHHHHHHHHHhcCCCCCCCCCcEEEEEEEE--CCCcEEEEEecCceeec
Confidence 4577766 554444332 34431110 1246788999999999999977 9999999985 35789999999999999
Q ss_pred cccHHHHHHHHhccCCC--CCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHhhcCCC
Q 047223 89 GASLISLLLACTRKTSD--TEALPTIPVQKRGGSSTATAGWFCWWLLLAIWS----AIRLIWNTIADLVTFLATVLFLKD 162 (348)
Q Consensus 89 G~s~~~~~~~l~~~~~~--p~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 162 (348)
|+|...++.++...... ....+..|. . + + ...+..+... .-..-|.. .+....
T Consensus 152 G~S~~~l~~el~~~Y~~~~~g~~~~l~~--~--~-~------y~d~~~~~~~~~~~~~~~yW~~----------~L~~~~ 210 (1304)
T 2vsq_A 152 GWCFGIVVQDLFKVYNALREQKPYSLPP--V--K-P------YKDYIKWLEKQDKQASLRYWRE----------YLEGFE 210 (1304)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCCCC--C--C-C------THHHHHHHHTSCHHHHHHHHHH----------HHTTCC
T ss_pred hhhHHHHHHHHHHHHHHhhcCCCCCCCC--c--c-c------HHHHHHHHhcchhhHHHHHHHH----------HhCCCC
Confidence 99999998887653210 000011111 0 0 0 0122211110 00111211 111111
Q ss_pred CCCCCcCC--CCCCCCCeEEEEEeeC---hhHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcCCcccccCCCccCCCC
Q 047223 163 TENPLKGG--PGVELVPKRFVHRTIG---LDDIKLVKNAMNMTINDVILGLTQAALSRYLHRRYGDKAMQNGGAKRESNN 237 (348)
Q Consensus 163 p~t~~~~~--~~~~~~~r~~~~~~~~---l~~vk~ia~~~g~TvNDVlla~~agAL~~yl~~~g~~~~~~~~~~~~~~~~ 237 (348)
+.+.+... ..............++ .+.++++|+++|+|+|.+++|+.+..|++|. |.
T Consensus 211 ~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~a~~~~~T~~~vllaa~a~~L~r~t---g~--------------- 272 (1304)
T 2vsq_A 211 GQTTFAEQRKKQKDGYEPKELLFSPSEAETKAFTELAKSQHTTLSTALQAVWSVLISRYQ---QS--------------- 272 (1304)
T ss_dssp CCCTTTTTCCCSSCCCCEEEEEECCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH---TC---------------
T ss_pred ccccCCCCCCccccccCcceEEEecCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc---CC---------------
Confidence 11122111 1100001112223344 5678889999999999999999999999995 42
Q ss_pred CCCCCCceEEEEEeeecCC--CchhhHHHHhhhcCCCCCCceEEEEEeecccCCCCCHHHHHHHHHHHHHHHhhh
Q 047223 238 TPPKNLRLRAAILVNLRPT--TGIQALADMMAKESKGGWGNWIGYILLPFTIALQNDPLDYIRVAKATIDRRKHS 310 (348)
Q Consensus 238 ~~p~~~~l~a~vPVslR~~--~~~~~~~~~~~~~~~~~~gN~~s~~~v~Lp~~~~~dp~eRL~~v~~~~~~~K~s 310 (348)
+ .+.+.+||+-|.. .+. +...|+.+..+.+.+.++...+..+.|+++++.+......
T Consensus 273 ---~--dvv~G~pvsgR~~~~~~~-----------~~~vG~fvntlplr~~~~~~~s~~~ll~~v~~~~~~a~~h 331 (1304)
T 2vsq_A 273 ---G--DLAFGTVVSGRPAEIKGV-----------EHMVGLFINVVPRRVKLSEGITFNGLLKRLQEQSLQSEPH 331 (1304)
T ss_dssp ---S--EEEEEEEECCCCTTSTTG-----------GGCCSSCCEEEEEEEECCTTCBHHHHHHHHHHHHHHHGGG
T ss_pred ---C--CEEEEEEeCCCCccchhh-----------hcccccceeEEEEEecCCCCCcHHHHHHHHHHHHHHhhhc
Confidence 1 5899999999986 332 2357888888888888764567899999999988776654
No 6
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=99.30 E-value=3.6e-11 Score=116.58 Aligned_cols=205 Identities=14% Similarity=0.114 Sum_probs=117.5
Q ss_pred HcCCCCCCCCcEEEEEecccCCCCeeEEEEeecccccCcccHHHHHHHHhccCC------CCCCCCCCCCCCCCCCCCcc
Q 047223 51 TTNPMDYSKPLWEVHLLNVKTSDAEAVGVFRIHHSIGDGASLISLLLACTRKTS------DTEALPTIPVQKRGGSSTAT 124 (348)
Q Consensus 51 ~~~pld~~~PlW~~~li~~~~~~~~~~v~~r~HHal~DG~s~~~~~~~l~~~~~------~p~~~p~~p~~~~~~~~~~~ 124 (348)
...+||...|+|++.+++ . ++++.+++.+||+++||+|...++.++..... .+...+..+- .
T Consensus 94 ~~~~~d~~~pl~r~~l~~--~-~~~~~l~l~~hH~i~Dg~S~~~l~~~l~~~Y~~~~~~~~~~~~~~~~~------~--- 161 (422)
T 1q9j_A 94 AELRLDQSVSLLHLQLIL--R-EGGAELTLYLHHCMADGHHGAVLVDELFSRYTDAVTTGDPGPITPQPT------P--- 161 (422)
T ss_dssp CCCCCCTTTCSEEEEEEC--C-SSSCEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHHSSSCCCCCCCCC------C---
T ss_pred ccCccCCCCCcEEEEEEe--c-CCCeEEEEEeceEEEchhhHHHHHHHHHHHHHHhhccCCCCCCCCCCC------C---
Confidence 357898556999999998 2 47899999999999999999999888765321 1111111000 0
Q ss_pred hhhHHHHHHHHH-------HHH---HHHHHHHHHHHHHHHHHhhcCCCCCCCCcCCCCCCCCCeEEEEEeeC---hhHHH
Q 047223 125 AGWFCWWLLLAI-------WSA---IRLIWNTIADLVTFLATVLFLKDTENPLKGGPGVELVPKRFVHRTIG---LDDIK 191 (348)
Q Consensus 125 ~~~~~~~~~~~~-------~~~---~~~~~~~~~~~~~~~~~~~~~~~p~t~~~~~~~~~~~~r~~~~~~~~---l~~vk 191 (348)
. +.......- ... .+.-|... +.. ....|...+........ .....++ .+.++
T Consensus 162 -~-~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~------l~~-----~~~lp~~~~~~~~~~~~-~~~~~l~~~~~~~l~ 227 (422)
T 1q9j_A 162 -L-SMEAVLAQRGIRKQGLSGAERFMSVMYAYE------IPA-----TETPAVLAHPGLPQAVP-VTRLWLSKQQTSDLM 227 (422)
T ss_dssp -B-CHHHHHHHSSCCC-----CTTSSTTTTCC------------------------CCSBCCCC-EEEECCCHHHHHHHH
T ss_pred -C-CHHHHHHhcCCcccccchhhhhhhhhhccc------CCC-----cccCCCCCCCCCCCCcc-ceEEEeCHHHHHHHH
Confidence 0 000000000 000 00000000 000 00001111111000011 1223344 45688
Q ss_pred HHHHHcCCcchHHHHHHHHHHHHHHHHhhcCCcccccCCCccCCCCCCCCCCceEEEEEeeecCCCchhhHHHHhhhcCC
Q 047223 192 LVKNAMNMTINDVILGLTQAALSRYLHRRYGDKAMQNGGAKRESNNTPPKNLRLRAAILVNLRPTTGIQALADMMAKESK 271 (348)
Q Consensus 192 ~ia~~~g~TvNDVlla~~agAL~~yl~~~g~~~~~~~~~~~~~~~~~~p~~~~l~a~vPVslR~~~~~~~~~~~~~~~~~ 271 (348)
++|+++|+|+|++++|+++.+|++| ...| . ..+.+.+|++.|...... .+.
T Consensus 228 ~~a~~~~~t~~~~l~aa~~~~l~r~-~~~~-------------------~-~~v~~g~~~~~R~~~~~~--------~~~ 278 (422)
T 1q9j_A 228 AFGREHRLSLNAVVAAAILLTEWQL-RNTP-------------------H-VPIPYVYPVDLRFVLAPP--------VAP 278 (422)
T ss_dssp HHHTTTTCCHHHHHHHHHHHHHHHH-HTCS-------------------S-CCEEEEEEEETTTTSSSC--------CCT
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHhc-ccCC-------------------C-ceEEEeeeeecccccCCC--------CCh
Confidence 8899999999999999999999998 1112 1 269999999999862100 000
Q ss_pred CCCCceEEEEEeecccCCCCCHHHHHHHHHHHHHHHhhh
Q 047223 272 GGWGNWIGYILLPFTIALQNDPLDYIRVAKATIDRRKHS 310 (348)
Q Consensus 272 ~~~gN~~s~~~v~Lp~~~~~dp~eRL~~v~~~~~~~K~s 310 (348)
....|.++...-.||+....++.+.|+++++.+......
T Consensus 279 ~~~~~~vG~f~n~lp~~~~~~~~~~l~~v~~~~~~~~~~ 317 (422)
T 1q9j_A 279 TEATNLLGAASYLAEIGPNTDIVDLASDIVATLRADLAN 317 (422)
T ss_dssp TTBSCCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhheeeeeeeeccCCCCHHHHHHHHHHHHHHHHhc
Confidence 235677777777778864468999999999988876554
No 7
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=98.53 E-value=2.2e-05 Score=79.20 Aligned_cols=164 Identities=14% Similarity=0.013 Sum_probs=87.2
Q ss_pred CcEEEEEecccCC-----CC--eeEEEEeecccccCcccHHHHHHHHhccCCCCC------CCCCCCCCC---CCCC--C
Q 047223 60 PLWEVHLLNVKTS-----DA--EAVGVFRIHHSIGDGASLISLLLACTRKTSDTE------ALPTIPVQK---RGGS--S 121 (348)
Q Consensus 60 PlW~~~li~~~~~-----~~--~~~v~~r~HHal~DG~s~~~~~~~l~~~~~~p~------~~p~~p~~~---~~~~--~ 121 (348)
+.+.+++|..... .+ +..++|+.||.++||+|+..|+..+++...++. ..+...+.. +-.+ .
T Consensus 155 ~~~~l~~v~~~~~~~~~~p~~~~~~lv~~~~H~~~DG~g~~~f~~~ll~~L~~~~~~~~~~~~~~~~~g~E~~~L~P~~e 234 (519)
T 3fot_A 155 KSIELFLLSDVSTDSTPIPQDATVEILFHSNHLFWDGIGCRKFVGDLFRLVGSYIGRSDSREMKKIQWGQEIKNLSPPVV 234 (519)
T ss_dssp CSCEEEEEESSSSTTSCCCTTCEEEEEEEECGGGCCHHHHHHHHHHHHHHHTTSTTC-CGGGSCCCCTTTTGGGSCCCTG
T ss_pred cceEEEEEeccccccccCCCCceEEEEEEeCceeEchHhHHHHHHHHHHHHHhhhccCCccCCCcCCCCcccccCCcCHH
Confidence 7899999854321 13 678999999999999999999888886533221 111111100 0000 0
Q ss_pred Ccchhh----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCcCCCCCCCCCeEEEEEeeCh---hHHHHHH
Q 047223 122 TATAGW----FCWWLLLAIWSAIRLIWNTIADLVTFLATVLFLKDTENPLKGGPGVELVPKRFVHRTIGL---DDIKLVK 194 (348)
Q Consensus 122 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~t~~~~~~~~~~~~r~~~~~~~~l---~~vk~ia 194 (348)
.. .+. .....-....... .... ... ..-..|++.... ...+....++- +.+++.|
T Consensus 235 ~~-~~~p~~~~~~e~~~~~~~~~----~~~~------~~~---~~~~~P~~~~~~----~~~~~~~~ls~~~t~~L~~~c 296 (519)
T 3fot_A 235 DS-LKLDINTLGSEFDDKCTEYT----SALV------ANY---KSRGMKFQPGLA----LPRCVIHKLSADESIDIVKAV 296 (519)
T ss_dssp GG-BSSCGGGCCHHHHHHHHHHH----HHHH------HHH---HSCCSBCCCCCC----CEEEEEEECCHHHHHHHHHHH
T ss_pred HH-hCCCCCCCCHHHHHHHHHHH----HHhh------cCC---CcccCCCCCCCC----CcceEEEEcCHHHHHHHHHHH
Confidence 00 000 0000000111111 0110 010 001113332222 12234445544 5566668
Q ss_pred HHc---CCcchHHHHHHHHHHHHHHHHhhcCCcccccCCCccCCCCCCCCCCceEEEEEeeecCCCc
Q 047223 195 NAM---NMTINDVILGLTQAALSRYLHRRYGDKAMQNGGAKRESNNTPPKNLRLRAAILVNLRPTTG 258 (348)
Q Consensus 195 ~~~---g~TvNDVlla~~agAL~~yl~~~g~~~~~~~~~~~~~~~~~~p~~~~l~a~vPVslR~~~~ 258 (348)
|++ |+|||.++.|+++.|+.+++...+. ++...+.+.+|||+|+.-.
T Consensus 297 k~~~~~g~Tvt~~l~Aa~~~al~~~~~~~~~-----------------~~~~~~~~~~pvnlR~~l~ 346 (519)
T 3fot_A 297 KTRLGPGFTISHLTQAAIVLALLDHLKPNDL-----------------SDDEVFISPTSVDGRRWLR 346 (519)
T ss_dssp HHHTCTTCCHHHHHHHHHHHHHHHHC----C-----------------CTTCCEEEEEEEECGGGBC
T ss_pred HhcCCCCeeHHHHHHHHHHHHHHhhcCCccc-----------------CCCccEEEEeeeeccccCC
Confidence 999 9999999999999999987543221 2323699999999998644
No 8
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=97.16 E-value=0.033 Score=54.07 Aligned_cols=180 Identities=15% Similarity=0.123 Sum_probs=101.2
Q ss_pred CCCcEEEEEecccCCCCeeEEEEeecccccCcccHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHH
Q 047223 58 SKPLWEVHLLNVKTSDAEAVGVFRIHHSIGDGASLISLLLACTRKTSDTEALPTIPVQKRGGSSTATAGWFCWWLLLAIW 137 (348)
Q Consensus 58 ~~PlW~~~li~~~~~~~~~~v~~r~HHal~DG~s~~~~~~~l~~~~~~p~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~ 137 (348)
+.|+-.+.+-.- . .|+.+|-+.+||+++||.|...|+..+..-... ...+..|. .. + +
T Consensus 136 ~~pll~vQvt~f-~-cgG~~lg~~~~H~v~Dg~~~~~fl~~wa~~~rg-~~~~~~P~----------~d---r-----~- 193 (421)
T 2bgh_A 136 EDVPLAVKISFF-E-CGGTAIGVNLSHKIADVLSLATFLNAWTATCRG-ETEIVLPN----------FD---L-----A- 193 (421)
T ss_dssp TTCSEEEEEEEC-T-TSCEEEEEEEETTTCCHHHHHHHHHHHHHHHTT-CSCCCCCB----------CS---H-----H-
T ss_pred CCceEEEEEEEE-c-CCCEEEEEEeeEEechHHHHHHHHHHHHHHhcC-CCCCCCCc----------cc---c-----c-
Confidence 468876666553 2 267999999999999999999998875432111 10110010 01 1 0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCcCCCCCCCCCeEEEEEeeChhHHHHHHHHc-------CCcchHHHHHHHH
Q 047223 138 SAIRLIWNTIADLVTFLATVLFLKDTENPLKGGPGVELVPKRFVHRTIGLDDIKLVKNAM-------NMTINDVILGLTQ 210 (348)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~p~t~~~~~~~~~~~~r~~~~~~~~l~~vk~ia~~~-------g~TvNDVlla~~a 210 (348)
. . +.+. ...+..+ ..... ..-......++-++++++++.. .+|-+|++.|.+-
T Consensus 194 ~-------~-------l~p~--~~~~~~~--~~~~~--~~~~~~~f~f~~~~i~~LK~~a~~~~~~~~~St~d~l~A~iW 253 (421)
T 2bgh_A 194 A-------R-------HFPP--VDNTPSP--ELVPD--ENVVMKRFVFDKEKIGALRAQASSASEEKNFSRVQLVVAYIW 253 (421)
T ss_dssp H-------H-------HSCC--CTTCCCC--CCCCC--SSEEEEEEEECHHHHHHHHHHTC-----CCCCHHHHHHHHHH
T ss_pred c-------c-------cCCC--cccCCCC--ccCCc--cceEEEEEEECHHHHHHHHHHhhccCCCCCCchhHhHHHHHH
Confidence 0 0 0000 0011111 00000 1222334577888888887663 3799999999887
Q ss_pred HHHHHHHHhhcCCcccccCCCccCCCCCCCCCCceEEEEEeeecCCCchhhHHHHhhhcCCCCCCceEEEEEeecccCCC
Q 047223 211 AALSRYLHRRYGDKAMQNGGAKRESNNTPPKNLRLRAAILVNLRPTTGIQALADMMAKESKGGWGNWIGYILLPFTIALQ 290 (348)
Q Consensus 211 gAL~~yl~~~g~~~~~~~~~~~~~~~~~~p~~~~l~a~vPVslR~~~~~~~~~~~~~~~~~~~~gN~~s~~~v~Lp~~~~ 290 (348)
.++.+-...... ++ ...+..++||.|..-+.. =+....||.+....+..+.++.
T Consensus 254 ~~~~~Ar~~~~~-----------------~~-~~~~l~~~vd~R~rl~pp--------lP~~y~GN~~~~~~~~~~~~~~ 307 (421)
T 2bgh_A 254 KHVIDVTRAKYG-----------------AK-NKFVVVQAVNLRSRMNPP--------LPHYAMGNIATLLFAAVDAEWD 307 (421)
T ss_dssp HHHHHHHHHHSC-----------------CC-SCEEEEEEEESGGGSSSC--------CCTTBCSCCEEEEEEEECTTCC
T ss_pred HHHHHHhcccCC-----------------CC-CceEEEEEecCccccCCC--------CCCCccceEEEEEEEEeccccc
Confidence 777655433221 33 268899999999864310 0246799999999988887522
Q ss_pred CCHHHHHHHHHHHHH
Q 047223 291 NDPLDYIRVAKATID 305 (348)
Q Consensus 291 ~dp~eRL~~v~~~~~ 305 (348)
.+..+-...|++.++
T Consensus 308 ~~l~~~a~~ir~ai~ 322 (421)
T 2bgh_A 308 KDFPDLIGPLRTSLE 322 (421)
T ss_dssp CCGGGGHHHHHHHTC
T ss_pred ccHHHHHHHHHHHHH
Confidence 223333344444433
No 9
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=96.43 E-value=0.036 Score=54.09 Aligned_cols=79 Identities=13% Similarity=0.003 Sum_probs=55.0
Q ss_pred EEeeChhHHHHHHHHc-------CCcchHHHHHHHHHHHHHHHHhhcCCcccccCCCccCCCCCCCCCCceEEEEEeeec
Q 047223 182 HRTIGLDDIKLVKNAM-------NMTINDVILGLTQAALSRYLHRRYGDKAMQNGGAKRESNNTPPKNLRLRAAILVNLR 254 (348)
Q Consensus 182 ~~~~~l~~vk~ia~~~-------g~TvNDVlla~~agAL~~yl~~~g~~~~~~~~~~~~~~~~~~p~~~~l~a~vPVslR 254 (348)
...++-++|+++++.. .+|-+|++.|.+=.++.+ +++. . ++ ...+..++||.|
T Consensus 233 ~f~fs~~~i~~LK~~a~~~~~~~~~St~dal~A~iWr~~~r---Ar~~---------------~-~~-~~~~l~~~vd~R 292 (439)
T 4g22_A 233 IFKLTREQISALKAKSKEDGNTISYSSYEMLAGHVWRCACK---ARGL---------------E-VD-QGTKLYIATDGR 292 (439)
T ss_dssp EEEECHHHHHHHHHGGGGGGCCCCCCHHHHHHHHHHHHHHH---HTTC---------------C-TT-CEEEEEEEEECT
T ss_pred EEEECHHHHHHHHHHhhccCCCCCccHHHHHHHHHHHHHHH---hcCC---------------C-CC-CcEEEEEEEccc
Confidence 4567777777776653 378899999988766654 3342 1 44 378999999999
Q ss_pred CCCchhhHHHHhhhcCCCCCCceEEEEEeecccC
Q 047223 255 PTTGIQALADMMAKESKGGWGNWIGYILLPFTIA 288 (348)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~gN~~s~~~v~Lp~~ 288 (348)
..-+.+ =+....||.+....+..+.+
T Consensus 293 ~rl~Pp--------lp~~Y~GN~v~~~~~~~~~~ 318 (439)
T 4g22_A 293 ARLRPS--------LPPGYFGNVIFTATPIAIAG 318 (439)
T ss_dssp TTSSSC--------CCTTBCSCCEEEECCEEEHH
T ss_pred CCCCCC--------CCCCcccceeehhhcceEHH
Confidence 864310 12457999999888877764
No 10
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=96.32 E-value=0.09 Score=51.38 Aligned_cols=89 Identities=8% Similarity=-0.075 Sum_probs=54.8
Q ss_pred CeEEEEEeeChhHHHHHHHH-----cCCcchHHHHHHHHHHHHHHHHhhcCCcccccCCCccCCCCCCCCCCceEEEEEe
Q 047223 177 PKRFVHRTIGLDDIKLVKNA-----MNMTINDVILGLTQAALSRYLHRRYGDKAMQNGGAKRESNNTPPKNLRLRAAILV 251 (348)
Q Consensus 177 ~r~~~~~~~~l~~vk~ia~~-----~g~TvNDVlla~~agAL~~yl~~~g~~~~~~~~~~~~~~~~~~p~~~~l~a~vPV 251 (348)
.|.|.+..-.++.+|+.+.. ..+|-+|++.|.+-.++.+-....... .. ++ ...+..++|
T Consensus 240 ~~~f~f~~~~i~~Lk~~a~~~~~~~~~~St~~~l~A~lW~~~~~Ar~~~~~~-------------~~-~~-~~~~l~~~v 304 (453)
T 2xr7_A 240 RGTFIITRHDIGKLKNLVLTRRPKLTHVTSFTVTCAYVWTCIIKSEAATGEE-------------ID-EN-GMEFFGCAA 304 (453)
T ss_dssp CEEEEECHHHHHHHHHHHHHHSCCCSCCCHHHHHHHHHHHHHHHHHHHTTCC-------------CC-TT-SEEEEEEEC
T ss_pred EEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHHHHhcccccc-------------CC-CC-cceEEEEEe
Confidence 34454333344444444333 238999999999887776554332100 00 44 378999999
Q ss_pred eecCCCchhhHHHHhhhcCCCCCCceEEEEEeecccC
Q 047223 252 NLRPTTGIQALADMMAKESKGGWGNWIGYILLPFTIA 288 (348)
Q Consensus 252 slR~~~~~~~~~~~~~~~~~~~~gN~~s~~~v~Lp~~ 288 (348)
|.|..-+.. =+....||.+....+.++.+
T Consensus 305 d~R~rl~pp--------lP~~Y~GN~~~~~~~~~~~~ 333 (453)
T 2xr7_A 305 DCRAQFNPP--------LPPSYFGNALVGYVARTRQV 333 (453)
T ss_dssp CTTSCSSSC--------CCTTBCSCCCCEEEEEEEHH
T ss_pred cccccCCCC--------CCcccccceeeeeeeeeeHH
Confidence 999864310 13467999999888887764
No 11
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=96.10 E-value=0.059 Score=52.59 Aligned_cols=79 Identities=18% Similarity=0.086 Sum_probs=54.5
Q ss_pred EEeeChhHHHHHHHHc---------CCcchHHHHHHHHHHHHHHHHhhcCCcccccCCCccCCCCCCCCCCceEEEEEee
Q 047223 182 HRTIGLDDIKLVKNAM---------NMTINDVILGLTQAALSRYLHRRYGDKAMQNGGAKRESNNTPPKNLRLRAAILVN 252 (348)
Q Consensus 182 ~~~~~l~~vk~ia~~~---------g~TvNDVlla~~agAL~~yl~~~g~~~~~~~~~~~~~~~~~~p~~~~l~a~vPVs 252 (348)
...++-+++++++++. .+|-+|++.|.+-.++.+-. .+.. . |+ ...+..++||
T Consensus 233 ~f~f~~~~i~~LK~~a~~~~~~~~~~~St~d~l~A~~Wr~~~~Ar--~~~~--------------~-~~-~~~~l~~~vd 294 (451)
T 2rkv_A 233 FFTFSPKAMSELKDAATKTLDASTKFVSTDDALSAFIWKSASRVR--LERI--------------D-GS-APTEFCRAVD 294 (451)
T ss_dssp EEEECHHHHHHHHHHHHTTCCTTCSCCCHHHHHHHHHHHHHHHHH--TTTS--------------C-TT-SEEEEEEEEE
T ss_pred EEEECHHHHHHHHHHHhhhccCCCCCccHHHHHHHHHHHHHHHHH--hccC--------------C-CC-CceEEEEEec
Confidence 4567777777776552 27999999999877766543 1210 1 44 3789999999
Q ss_pred ecCCCchhhHHHHhhhcCCCCCCceEEEEEeecccC
Q 047223 253 LRPTTGIQALADMMAKESKGGWGNWIGYILLPFTIA 288 (348)
Q Consensus 253 lR~~~~~~~~~~~~~~~~~~~~gN~~s~~~v~Lp~~ 288 (348)
.|..-+. +....||-+....+..+.+
T Consensus 295 ~R~rl~l----------P~~y~GN~~~~~~~~~~~~ 320 (451)
T 2rkv_A 295 ARPAMGV----------SNNYPGLLQNMTYHNSTIG 320 (451)
T ss_dssp CHHHHTC----------CTTCCSCCEEEEEEEEEHH
T ss_pred ccccCCC----------CCCCcccceeeecccCcHH
Confidence 9975322 2467999999888887664
No 12
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=95.25 E-value=1.2 Score=43.26 Aligned_cols=76 Identities=9% Similarity=-0.008 Sum_probs=53.2
Q ss_pred EEeeChhHHHHHHHHc--------CCcchHHHHHHHHHHHHHHHHhhcCCcccccCCCccCCCCCCCCCCceEEEEEeee
Q 047223 182 HRTIGLDDIKLVKNAM--------NMTINDVILGLTQAALSRYLHRRYGDKAMQNGGAKRESNNTPPKNLRLRAAILVNL 253 (348)
Q Consensus 182 ~~~~~l~~vk~ia~~~--------g~TvNDVlla~~agAL~~yl~~~g~~~~~~~~~~~~~~~~~~p~~~~l~a~vPVsl 253 (348)
...++-+++++++++. .+|-+|++.|.+-.++.+-. .. ...+..++||.
T Consensus 248 ~f~f~~~~i~~LK~~a~~~~~~~~~~St~d~l~A~lWr~~~~Ar---~~--------------------~~~~l~~~vd~ 304 (454)
T 2e1v_A 248 TFILTRAVINQLKDRVLAQLPTLEYVSSFTVACAYIWSCIAKSR---ND--------------------KLQLFGFPIDR 304 (454)
T ss_dssp EEEECHHHHHHHHHHHHHHCTTCSCCCHHHHHHHHHHHHHHHHH---CC--------------------SEEEEEEEEEC
T ss_pred EEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHhhhc---CC--------------------CceEEEEEecc
Confidence 4566666666665542 37999999999877776543 21 26789999999
Q ss_pred cCCCchhhHHHHhhhcCCCCCCceEEEEEeecccC
Q 047223 254 RPTTGIQALADMMAKESKGGWGNWIGYILLPFTIA 288 (348)
Q Consensus 254 R~~~~~~~~~~~~~~~~~~~~gN~~s~~~v~Lp~~ 288 (348)
|..-+.. =+....||.+....+.++.+
T Consensus 305 R~rl~pp--------lP~~Y~GN~~~~~~~~~~~~ 331 (454)
T 2e1v_A 305 RARMKPP--------IPTAYFGNCVGGCAAIAKTN 331 (454)
T ss_dssp GGGSSSC--------CCTTBCSCCEEEEEEEEEGG
T ss_pred hhccCCC--------CCcccccceeeeEEeecchh
Confidence 9864310 12457999999998888875
No 13
>1baz_A ARC repressor; transcription regulation; 1.90A {Enterobacteria phage P22} SCOP: a.43.1.1 PDB: 1bdv_A* 1arq_A 1arr_A 1bdt_A* 1par_A* 1myk_A 1qtg_A 1b28_A 1myl_A
Probab=46.77 E-value=25 Score=23.40 Aligned_cols=27 Identities=15% Similarity=0.185 Sum_probs=20.6
Q ss_pred hHHHHHHHHcCCcchHHHHHHHHHHHH
Q 047223 188 DDIKLVKNAMNMTINDVILGLTQAALS 214 (348)
Q Consensus 188 ~~vk~ia~~~g~TvNDVlla~~agAL~ 214 (348)
+.++..|+..|.|+|..+..++..++.
T Consensus 20 ~~l~~~A~~~grS~N~~i~~~L~~~l~ 46 (53)
T 1baz_A 20 DLVRKVAEENGRSVNSEIYQRVMESFK 46 (53)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHh
Confidence 345556777899999999988776654
No 14
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=44.38 E-value=17 Score=31.67 Aligned_cols=96 Identities=13% Similarity=-0.001 Sum_probs=61.1
Q ss_pred EEEEeeChhHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcCCcccccCCCccCCCCCCCCCCceEEEEEe-eecCCCc
Q 047223 180 FVHRTIGLDDIKLVKNAMNMTINDVILGLTQAALSRYLHRRYGDKAMQNGGAKRESNNTPPKNLRLRAAILV-NLRPTTG 258 (348)
Q Consensus 180 ~~~~~~~l~~vk~ia~~~g~TvNDVlla~~agAL~~yl~~~g~~~~~~~~~~~~~~~~~~p~~~~l~a~vPV-slR~~~~ 258 (348)
..+.++++..+.+.+++.+.|+|+.++=|++.||+++=+-... +..+.... -- ..+.+.+.| +...
T Consensus 31 ~~~~evDvt~l~~~rk~~~ls~~~~~ikAv~~Al~~~P~~n~~--------~~~~~~i~-~~-~~i~igvAVf~t~~--- 97 (217)
T 2i9d_A 31 SITSEVECGGARQRAKAAGQSFFLHYLYAVLRAANEIPEFRYR--------IDPDGRVV-LY-DTIDMLSPIKIKEN--- 97 (217)
T ss_dssp EEEEEEECHHHHHHHHHTTCCHHHHHHHHHHHHHHHSGGGGEE--------ECTTSCEE-EE-SCCEEEEEEECSTT---
T ss_pred EEEEEEEhHHHHHHHHHcCCCHHHHHHHHHHHHHHhCHHhheE--------EcCCCEEE-Ee-cccCeEEEEEecCC---
Confidence 4578999999999999999999999999999999986433221 11000011 11 257788888 6522
Q ss_pred hhhHHHHhhhcCCCCCCceEEEEEeecccCCCCCHHHHHHHHHHHHHHHhh
Q 047223 259 IQALADMMAKESKGGWGNWIGYILLPFTIALQNDPLDYIRVAKATIDRRKH 309 (348)
Q Consensus 259 ~~~~~~~~~~~~~~~~gN~~s~~~v~Lp~~~~~dp~eRL~~v~~~~~~~K~ 309 (348)
| .++.+. .|. ..|..+=.+.+++.+++.|.
T Consensus 98 ----------------G-L~~pv~--~~~--~~~~~~i~~~~~~l~~~ar~ 127 (217)
T 2i9d_A 98 ----------------G-KFFTTR--FPY--HNDFDTFYQEARLIIDAIPE 127 (217)
T ss_dssp ----------------S-CEEEEE--ECC--CSSHHHHHHHHHHHHHHCCS
T ss_pred ----------------c-eEeEEE--ecC--CCCHHHHHHHHHHHHHHHHh
Confidence 1 234333 354 35666655666666666665
No 15
>3qoq_A Alginate and motility regulator Z; protein-DNA complex, ribbon-helix-helix; HET: DNA; 3.10A {Pseudomonas aeruginosa}
Probab=43.33 E-value=28 Score=24.72 Aligned_cols=28 Identities=18% Similarity=0.234 Sum_probs=23.1
Q ss_pred hhHHHHHHHHcCCcchHHHHHHHHHHHH
Q 047223 187 LDDIKLVKNAMNMTINDVILGLTQAALS 214 (348)
Q Consensus 187 l~~vk~ia~~~g~TvNDVlla~~agAL~ 214 (348)
-+.++..|+..|.|+|..+..++..+|.
T Consensus 31 ~~~L~~~A~~~grSlNaeIv~~Le~sl~ 58 (69)
T 3qoq_A 31 REQIAEVARSHHRSMNSEIIARLEQSLL 58 (69)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 4667777888999999999998877765
No 16
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=40.51 E-value=13 Score=32.24 Aligned_cols=25 Identities=16% Similarity=0.287 Sum_probs=21.6
Q ss_pred EEEEeecccccCcccHHHHHHHHhc
Q 047223 77 VGVFRIHHSIGDGASLISLLLACTR 101 (348)
Q Consensus 77 ~v~~r~HHal~DG~s~~~~~~~l~~ 101 (348)
-+.+.+||.++||.-+.+|+..+-+
T Consensus 182 ~lsls~DHRvvDG~~aa~Fl~~lk~ 206 (213)
T 3cla_A 182 PLSVQVHHAVCDGFHVARFINRLQE 206 (213)
T ss_dssp EEEEEEETTTCCHHHHHHHHHHHHH
T ss_pred EEEEEEcccccChHHHHHHHHHHHH
Confidence 4888999999999999999877643
No 17
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=39.46 E-value=18 Score=31.51 Aligned_cols=38 Identities=0% Similarity=-0.077 Sum_probs=34.1
Q ss_pred EEEEeeChhHHHHHHHHcCCcchHHHHHHHHHHHHHHH
Q 047223 180 FVHRTIGLDDIKLVKNAMNMTINDVILGLTQAALSRYL 217 (348)
Q Consensus 180 ~~~~~~~l~~vk~ia~~~g~TvNDVlla~~agAL~~yl 217 (348)
..+.++++..+.+.+++.+.|+|+.++=|++.||+++=
T Consensus 34 t~~~evDvt~l~~~rk~~~ls~~~~~ikAv~~Al~~~P 71 (219)
T 1q23_A 34 NQTVQLDITAFLKTVKKNKHKFYPAFIHILARLMNAHP 71 (219)
T ss_dssp EEEEEEECHHHHHHHHHTTCCHHHHHHHHHHHHHTTCG
T ss_pred EEEEEEEhHHHHHHHHHcCCCHHHHHHHHHHHHHHhCh
Confidence 35789999999999999999999999999999998653
No 18
>1taf_B TFIID TBP associated factor 62; transcription initiation, histone fold, complex (TWO transcr factors); 2.00A {Drosophila melanogaster} SCOP: a.22.1.3
Probab=38.54 E-value=55 Score=23.25 Aligned_cols=38 Identities=16% Similarity=0.266 Sum_probs=33.0
Q ss_pred EeeChhHHHHHHHHcCC-cchHHHHHHHHHHHHHHHHhh
Q 047223 183 RTIGLDDIKLVKNAMNM-TINDVILGLTQAALSRYLHRR 220 (348)
Q Consensus 183 ~~~~l~~vk~ia~~~g~-TvNDVlla~~agAL~~yl~~~ 220 (348)
..+|.+.|+.+++..|. .++|=....++.-+..++.+-
T Consensus 5 s~lp~~~v~~iaes~Gi~~lsddaa~~LA~dvEyr~~eI 43 (70)
T 1taf_B 5 SSISAESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRI 43 (70)
T ss_dssp CCCCHHHHHHHHHHTTCCCBCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 36899999999999998 899999999998887776553
No 19
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=38.43 E-value=15 Score=32.06 Aligned_cols=24 Identities=25% Similarity=0.250 Sum_probs=21.2
Q ss_pred EEEEeecccccCcccHHHHHHHHh
Q 047223 77 VGVFRIHHSIGDGASLISLLLACT 100 (348)
Q Consensus 77 ~v~~r~HHal~DG~s~~~~~~~l~ 100 (348)
-+.+.+||.++||.-+.+|+..+-
T Consensus 190 ~lsls~DHRvvDG~~aa~Fl~~lk 213 (217)
T 2i9d_A 190 PIAMTIHHGFIDGHHLSLFYKKVE 213 (217)
T ss_dssp EEEEEEETTTCCHHHHHHHHHHHH
T ss_pred EEEEEecchhhChHHHHHHHHHHH
Confidence 488899999999999999988764
No 20
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=38.38 E-value=15 Score=32.07 Aligned_cols=25 Identities=20% Similarity=0.313 Sum_probs=21.5
Q ss_pred EEEEeecccccCcccHHHHHHHHhc
Q 047223 77 VGVFRIHHSIGDGASLISLLLACTR 101 (348)
Q Consensus 77 ~v~~r~HHal~DG~s~~~~~~~l~~ 101 (348)
-+.+.+||.++||.-+.+|+..+-+
T Consensus 186 ~lsls~DHRvvDG~~aa~Fl~~lk~ 210 (219)
T 1q23_A 186 PLAIQVHHAVCDGFHVGRMLNELQQ 210 (219)
T ss_dssp EEEEEEETTTCCHHHHHHHHHHHHH
T ss_pred EEEEEEEchhhChHHHHHHHHHHHH
Confidence 4888999999999999999877643
No 21
>1nla_A Transcriptional repressor ARC; 3(10) helix, beta-ribbon, beta-sheet, structural switching; NMR {Enterobacteria phage P22} SCOP: a.43.1.1
Probab=37.97 E-value=38 Score=23.64 Aligned_cols=28 Identities=14% Similarity=0.210 Sum_probs=22.7
Q ss_pred hHHHHHHHHcCCcchHHHHHHHHHHHHH
Q 047223 188 DDIKLVKNAMNMTINDVILGLTQAALSR 215 (348)
Q Consensus 188 ~~vk~ia~~~g~TvNDVlla~~agAL~~ 215 (348)
+.++..|+..|.|+|.-+..++..++..
T Consensus 20 ~~l~~~A~~~GrSlN~~Iv~~L~~~l~~ 47 (64)
T 1nla_A 20 DLVRKVAEENGRSVNSEIYQRVMESFKK 47 (64)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHhc
Confidence 4566678888999999999998877653
No 22
>2gpe_A Bifunctional protein PUTA; ribbon-helix-helix, DNA-binding domain, proline catabo proline utilization A, DNA binding protein; 1.90A {Escherichia coli} PDB: 2rbf_A* 2jxg_A 2jxh_A 2jxi_A*
Probab=37.78 E-value=43 Score=21.63 Aligned_cols=32 Identities=22% Similarity=0.219 Sum_probs=24.7
Q ss_pred ChhHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhc
Q 047223 186 GLDDIKLVKNAMNMTINDVILGLTQAALSRYLHRRY 221 (348)
Q Consensus 186 ~l~~vk~ia~~~g~TvNDVlla~~agAL~~yl~~~g 221 (348)
-.+.++.+++..|.|-+.++ -.|+..|+....
T Consensus 14 l~~~l~~lA~~~~rs~s~li----r~Ai~~yl~~~e 45 (52)
T 2gpe_A 14 TRERIKSAATRIDRTPHWLI----KQAIFSYLEQLE 45 (52)
T ss_dssp HHHHHHHHHHHTTCCHHHHH----HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCcCHHHHH----HHHHHHHHHHHH
Confidence 35677888999999999985 456778887654
No 23
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=36.85 E-value=17 Score=31.91 Aligned_cols=30 Identities=17% Similarity=0.243 Sum_probs=24.2
Q ss_pred EEEeecccccCcccHHHHHHHHhccCCCCC
Q 047223 78 GVFRIHHSIGDGASLISLLLACTRKTSDTE 107 (348)
Q Consensus 78 v~~r~HHal~DG~s~~~~~~~l~~~~~~p~ 107 (348)
+.+.+||.+.||.-+.+|+..+-+...+|.
T Consensus 189 lsls~DHRviDGa~aa~Fl~~l~~~le~p~ 218 (224)
T 3rqc_A 189 LSLSCDHRLIDGAVATRFIVDLKKVIEDPN 218 (224)
T ss_dssp EEEEEETTTSCHHHHHHHHHHHHHHHTCTT
T ss_pred EEEEeccceecHHHHHHHHHHHHHHHhCHH
Confidence 789999999999999999888765434543
No 24
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=36.75 E-value=20 Score=31.12 Aligned_cols=38 Identities=13% Similarity=0.183 Sum_probs=34.0
Q ss_pred EEEEeeChhHHHHHHHHcCCcchHHHHHHHHHHHHHHH
Q 047223 180 FVHRTIGLDDIKLVKNAMNMTINDVILGLTQAALSRYL 217 (348)
Q Consensus 180 ~~~~~~~l~~vk~ia~~~g~TvNDVlla~~agAL~~yl 217 (348)
..+.++++..+.+.+++.+.|+|+.++=|++.||+++=
T Consensus 29 ~~~~evDvt~l~~~rk~~~ls~~~~~ikAv~~Al~~~P 66 (213)
T 3cla_A 29 SLTSKIDITTLKKSLDDSAYKFYPVMIYLIAQAVNQFD 66 (213)
T ss_dssp EEEEEEECHHHHHHHHTSSCCHHHHHHHHHHHHHTTCG
T ss_pred EEEEEEEHHHHHHHHHHhCCCHHHHHHHHHHHHHhhCH
Confidence 45789999999999999999999999999999998653
No 25
>1p94_A Plasmid partition protein PArg; ribbon-helix-helix, dimer, DNA binding, cell cycle; NMR {Salmonella enterica} SCOP: a.43.1.3
Probab=36.07 E-value=38 Score=24.46 Aligned_cols=30 Identities=20% Similarity=0.277 Sum_probs=21.8
Q ss_pred hhHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhh
Q 047223 187 LDDIKLVKNAMNMTINDVILGLTQAALSRYLHRR 220 (348)
Q Consensus 187 l~~vk~ia~~~g~TvNDVlla~~agAL~~yl~~~ 220 (348)
-..+|..|...|.|++|++--+ ++.||.++
T Consensus 46 h~rlK~~Aa~~g~Smsdvvrel----i~~~L~~~ 75 (76)
T 1p94_A 46 HTRFKAACARKGTSITDVVNQL----VDNWLKEN 75 (76)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHH----HHHHHHHC
T ss_pred HHHHHHHHHHcCCCHHHHHHHH----HHHHHHhc
Confidence 3467777888899999998766 45666543
No 26
>2hue_C Histone H4; mini beta sheet, elongated beta sandwhich, DNA binding prote; 1.70A {Xenopus laevis} SCOP: a.22.1.1 PDB: 3nqj_B 1aoi_B 3kwq_B* 1hio_D 2yfv_B
Probab=34.94 E-value=43 Score=24.48 Aligned_cols=37 Identities=19% Similarity=0.223 Sum_probs=32.6
Q ss_pred eeChhHHHHHHHHcCCc-chHHHHHHHHHHHHHHHHhh
Q 047223 184 TIGLDDIKLVKNAMNMT-INDVILGLTQAALSRYLHRR 220 (348)
Q Consensus 184 ~~~l~~vk~ia~~~g~T-vNDVlla~~agAL~~yl~~~ 220 (348)
.+|.+.|+++++..|++ |++-..-.+...+..|++.-
T Consensus 10 ~ip~~~I~Riar~~Gv~rIs~da~~~l~~~l~~~~~~I 47 (84)
T 2hue_C 10 GITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENV 47 (84)
T ss_dssp SSCHHHHHHHHHHTTCCEECTTHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCchhccHHHHHHHHHHHHHHHHHH
Confidence 47899999999999985 99999999999999888764
No 27
>2k9i_A Plasmid PRN1, complete sequence; plasmid COPY control protein, ribbon helix helix protein, DNA binding protein; NMR {Sulfolobus islandicus} PDB: 3ft7_A
Probab=32.84 E-value=56 Score=21.04 Aligned_cols=36 Identities=25% Similarity=0.277 Sum_probs=24.5
Q ss_pred EEeeCh---hHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhc
Q 047223 182 HRTIGL---DDIKLVKNAMNMTINDVILGLTQAALSRYLHRRY 221 (348)
Q Consensus 182 ~~~~~l---~~vk~ia~~~g~TvNDVlla~~agAL~~yl~~~g 221 (348)
+..+|- +.++.+++..|.|.++++-- ||..|+.++.
T Consensus 13 ~vrl~~el~~~l~~~a~~~g~s~s~~ir~----ai~~~l~~~~ 51 (55)
T 2k9i_A 13 GVYIPQEWHDRLMEIAKEKNLTLSDVCRL----AIKEYLDNHD 51 (55)
T ss_dssp EEEECHHHHHHHHHHHHHHTCCHHHHHHH----HHHHHHHHHC
T ss_pred EEEcCHHHHHHHHHHHHHhCCCHHHHHHH----HHHHHHHHhH
Confidence 455554 45555677789999997654 5667776654
No 28
>1id3_B Histone H4; nucleosome core particle, chromatin, protein/DNA interaction, nucleoprotein, supercoiled DNA; 3.10A {Saccharomyces cerevisiae} SCOP: a.22.1.1
Probab=31.41 E-value=50 Score=25.15 Aligned_cols=39 Identities=18% Similarity=0.225 Sum_probs=34.0
Q ss_pred EeeChhHHHHHHHHcCCc-chHHHHHHHHHHHHHHHHhhc
Q 047223 183 RTIGLDDIKLVKNAMNMT-INDVILGLTQAALSRYLHRRY 221 (348)
Q Consensus 183 ~~~~l~~vk~ia~~~g~T-vNDVlla~~agAL~~yl~~~g 221 (348)
..+|.+.|+++++..|++ |++-+.-++...+..|++.--
T Consensus 27 ~~ip~~~I~Rlar~~Gv~rIS~da~~~l~~~le~fi~~I~ 66 (102)
T 1id3_B 27 QGITKPAIRRLARRGGVKRISGLIYEEVRAVLKSFLESVI 66 (102)
T ss_dssp GGSCHHHHHHHHHHTTCCEECTTHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCchhccHHHHHHHHHHHHHHHHHHH
Confidence 458999999999999985 999999999999999887643
No 29
>2an7_A Protein PARD; bacterial antidote, ribbon-helix-helix, DNA-binding motif, plasmid addiction, DNA binding protein; NMR {Escherichia coli}
Probab=31.41 E-value=28 Score=25.46 Aligned_cols=22 Identities=18% Similarity=0.155 Sum_probs=19.4
Q ss_pred hHHHHHHHHcCCcchHHHHHHH
Q 047223 188 DDIKLVKNAMNMTINDVILGLT 209 (348)
Q Consensus 188 ~~vk~ia~~~g~TvNDVlla~~ 209 (348)
..+|++|+.-|.|||+++.-.+
T Consensus 14 ~rLKalAa~qG~SInqli~E~l 35 (83)
T 2an7_A 14 QSLKALAALQGKTIKQYALERL 35 (83)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHT
T ss_pred HHHHHHHHHcCCcHHHHHHHHc
Confidence 5688999999999999998874
No 30
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=29.80 E-value=18 Score=31.84 Aligned_cols=24 Identities=17% Similarity=0.299 Sum_probs=21.2
Q ss_pred EEEeecccccCcccHHHHHHHHhc
Q 047223 78 GVFRIHHSIGDGASLISLLLACTR 101 (348)
Q Consensus 78 v~~r~HHal~DG~s~~~~~~~l~~ 101 (348)
+.+.+||.+.||.-+.+|+..+-+
T Consensus 198 lsls~DHRviDGa~aa~Fl~~lk~ 221 (233)
T 1scz_A 198 LALSYDHRLIDGRESVGFLVTIKE 221 (233)
T ss_dssp EEEEEETTTCCHHHHHHHHHHHHH
T ss_pred EEEEEcceeechHHHHHHHHHHHH
Confidence 788899999999999999877654
No 31
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=28.83 E-value=23 Score=31.22 Aligned_cols=25 Identities=20% Similarity=0.187 Sum_probs=21.8
Q ss_pred EEEEeecccccCcccHHHHHHHHhc
Q 047223 77 VGVFRIHHSIGDGASLISLLLACTR 101 (348)
Q Consensus 77 ~v~~r~HHal~DG~s~~~~~~~l~~ 101 (348)
-+.+.+||.++||.-+.+|+..+-+
T Consensus 205 ~lsls~DHRviDGa~aa~Fl~~lk~ 229 (239)
T 3b8k_A 205 SVTLSCDHRVVDGAVGAQWLAEFRK 229 (239)
T ss_dssp EEEECCCCCSSCHHHHHHHHHHHHH
T ss_pred EEEEEEcceeechHHHHHHHHHHHH
Confidence 4889999999999999999877654
No 32
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=28.53 E-value=27 Score=30.92 Aligned_cols=25 Identities=8% Similarity=-0.043 Sum_probs=21.6
Q ss_pred EEEEeecccccCcccHHHHHHHHhc
Q 047223 77 VGVFRIHHSIGDGASLISLLLACTR 101 (348)
Q Consensus 77 ~v~~r~HHal~DG~s~~~~~~~l~~ 101 (348)
-+.+.+||.++||.-+.+|+..+-+
T Consensus 209 ~lsls~DHRviDGa~aa~Fl~~lk~ 233 (243)
T 1dpb_A 209 PLSLSYDCRVINGAAAARFTKRLGD 233 (243)
T ss_dssp EEEEEEETTTSCHHHHHHHHHHHHH
T ss_pred EEEEEECcccccHHHHHHHHHHHHH
Confidence 4888999999999999999877654
No 33
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=26.82 E-value=62 Score=28.14 Aligned_cols=39 Identities=10% Similarity=0.242 Sum_probs=32.3
Q ss_pred EEEEeeChhHHHHHHHH-----cCCcchHHHHHHHHHHHHHHHH
Q 047223 180 FVHRTIGLDDIKLVKNA-----MNMTINDVILGLTQAALSRYLH 218 (348)
Q Consensus 180 ~~~~~~~l~~vk~ia~~-----~g~TvNDVlla~~agAL~~yl~ 218 (348)
..+.++++..+.+.+++ .+.|+|+.++-|++.||+++=+
T Consensus 33 ~~~~evDvt~l~~~r~~~k~~g~kls~~~~~ikA~~~Al~~~P~ 76 (224)
T 3rqc_A 33 TVMEEVDVTSMVSILDSAKARNRKVTVTGFLARIVPSILKQYPY 76 (224)
T ss_dssp EEEECCBTHHHHHHHHHHTTTTCCCCHHHHHHHHHHHHHHHSGG
T ss_pred EEEEEEEHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCHH
Confidence 45688999999888766 4679999999999999998643
No 34
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=25.71 E-value=32 Score=30.83 Aligned_cols=25 Identities=20% Similarity=0.154 Sum_probs=21.6
Q ss_pred EEEEeecccccCcccHHHHHHHHhc
Q 047223 77 VGVFRIHHSIGDGASLISLLLACTR 101 (348)
Q Consensus 77 ~v~~r~HHal~DG~s~~~~~~~l~~ 101 (348)
-+.+.+||.++||.-+.+|+..+-+
T Consensus 225 ~lsls~DHRviDGa~aa~Fl~~lk~ 249 (262)
T 2ii3_A 225 NVSWSADHRIIDGATVSRFSNLWKS 249 (262)
T ss_dssp EEEEEEETTTCCHHHHHHHHHHHHH
T ss_pred EEEEEECcceecHHHHHHHHHHHHH
Confidence 3888999999999999999887654
No 35
>3t76_A VANU, transcriptional regulator vanug; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.12A {Enterococcus faecalis} PDB: 3t75_A* 3tyr_A* 3tys_A*
Probab=23.67 E-value=28 Score=25.55 Aligned_cols=21 Identities=19% Similarity=0.351 Sum_probs=18.8
Q ss_pred eChhHHHHHHHHcCCcchHHH
Q 047223 185 IGLDDIKLVKNAMNMTINDVI 205 (348)
Q Consensus 185 ~~l~~vk~ia~~~g~TvNDVl 205 (348)
++++.+.++|+.+|+++.|++
T Consensus 63 ~s~~~l~kIa~~L~v~~~~L~ 83 (88)
T 3t76_A 63 VSLTVLLAICEYLNCDFGDII 83 (88)
T ss_dssp CCHHHHHHHHHHHTCCGGGTC
T ss_pred cCHHHHHHHHHHHCcCHHHHh
Confidence 478999999999999999875
No 36
>2kel_A SVTR protein, uncharacterized protein 56B; homodimer, ribbon-helix-helix, transcription repres; NMR {Sulfolobus islandicus rod-shaped virus}
Probab=22.56 E-value=1.1e+02 Score=20.47 Aligned_cols=34 Identities=21% Similarity=0.348 Sum_probs=22.0
Q ss_pred EeeChh---HHHHHHHHcCCcchHHHHHHHHHHHHHHHHhh
Q 047223 183 RTIGLD---DIKLVKNAMNMTINDVILGLTQAALSRYLHRR 220 (348)
Q Consensus 183 ~~~~l~---~vk~ia~~~g~TvNDVlla~~agAL~~yl~~~ 220 (348)
..++-+ .++..|...|.|+|+++--+ |..|+..+
T Consensus 18 vrId~eLH~rlk~~Aa~~g~Sln~~i~eA----L~~yl~~~ 54 (56)
T 2kel_A 18 IYMDKDLKTRLKVYCAKNNLQLTQAIEEA----IKEYLQKR 54 (56)
T ss_dssp EEEEHHHHHHHHHHHHHSCCCHHHHHHHH----HHHHHHHH
T ss_pred EEeCHHHHHHHHHHHHHcCCCHHHHHHHH----HHHHHHHh
Confidence 444444 45555777899999987655 55666544
No 37
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=22.26 E-value=33 Score=30.67 Aligned_cols=30 Identities=23% Similarity=0.179 Sum_probs=24.1
Q ss_pred EEEeecccccCcccHHHHHHHHhccCCCCC
Q 047223 78 GVFRIHHSIGDGASLISLLLACTRKTSDTE 107 (348)
Q Consensus 78 v~~r~HHal~DG~s~~~~~~~l~~~~~~p~ 107 (348)
+.+.+||-+.||.-+.+|+..+-+...+|.
T Consensus 212 lsLs~DHRviDGa~aa~Fl~~lk~~Le~P~ 241 (256)
T 3mae_A 212 LCLSIDHRILDGLLAGKFLQAIKANVEKIS 241 (256)
T ss_dssp EEEEEETTTCCHHHHHHHHHHHHHHHHTCC
T ss_pred EEEEEccccccHHHHHHHHHHHHHHHhChH
Confidence 788899999999999999888665433554
No 38
>2yfw_B Histone H4, H4; cell cycle, kinetochore, centromere, histone chaperone, BUDD; 2.60A {Kluyveromyces lactis nrrl y-1140}
Probab=22.05 E-value=96 Score=23.50 Aligned_cols=39 Identities=15% Similarity=0.202 Sum_probs=32.4
Q ss_pred EeeChhHHHHHHHHcCCc-chHHHHHHHHHHHHHHHHhhc
Q 047223 183 RTIGLDDIKLVKNAMNMT-INDVILGLTQAALSRYLHRRY 221 (348)
Q Consensus 183 ~~~~l~~vk~ia~~~g~T-vNDVlla~~agAL~~yl~~~g 221 (348)
..+|.+.|+++++..|+. |++-..-.++..|..|+++--
T Consensus 28 ~gip~~~I~Rlar~~G~~rIs~~a~~~l~~vle~~~~~V~ 67 (103)
T 2yfw_B 28 QGITKPAIRRLARRGGVKRISGLIYEEVRNVLKTFLESVI 67 (103)
T ss_dssp --CCHHHHHHHHHHTTCCEECTTHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHcCccccCHHHHHHHHHHHHHHHHHHH
Confidence 349999999999999885 889899999999988887654
No 39
>2bsq_E FITA, trafficking protein A; transcription, transcription regulation complex, PIN domain, ribbon-helix-helix, DNA binding; HET: 5IU; 3.0A {Neisseria gonorrhoeae} SCOP: a.43.1.8 PDB: 2h1o_E*
Probab=21.29 E-value=1e+02 Score=22.24 Aligned_cols=27 Identities=15% Similarity=0.084 Sum_probs=22.7
Q ss_pred hHHHHHHHHcCCcchHHHHHHHHHHHH
Q 047223 188 DDIKLVKNAMNMTINDVILGLTQAALS 214 (348)
Q Consensus 188 ~~vk~ia~~~g~TvNDVlla~~agAL~ 214 (348)
..+|..|+++|-|+|+.+..++..++.
T Consensus 14 ~~Lk~rAa~~GrSle~e~r~iL~~a~~ 40 (77)
T 2bsq_E 14 NAIKFRARAAGRSTEAEIRLILDNIAK 40 (77)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHc
Confidence 456677888999999999999988875
No 40
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=21.19 E-value=73 Score=27.95 Aligned_cols=36 Identities=17% Similarity=0.374 Sum_probs=27.9
Q ss_pred EEEeeChhHHHHHHHH--------cCCcchHHHHHHHHHHHHHH
Q 047223 181 VHRTIGLDDIKLVKNA--------MNMTINDVILGLTQAALSRY 216 (348)
Q Consensus 181 ~~~~~~l~~vk~ia~~--------~g~TvNDVlla~~agAL~~y 216 (348)
.+.++++..+.+.+++ .+.|+|+.++-|++.||+++
T Consensus 40 ~~~evDvt~l~~~r~~~k~~~~~~~kls~~~~~ikAv~~Al~~~ 83 (239)
T 3b8k_A 40 LSIDVNMGEVLLVRKELNKILEGRSKISVNDFIIKASALACLKV 83 (239)
T ss_dssp EEEEECCTTHHHHHHHTHHHHTTSSCCCHHHHHHHHHHHHHHHC
T ss_pred EEEEEEcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHhC
Confidence 3567777776665443 48999999999999999865
No 41
>1tzy_D Histone H4-VI; histone-fold, tetramer-dimer-dimer, DNA binding protein; 1.90A {Gallus gallus} SCOP: a.22.1.1 PDB: 1f66_B 1eqz_D 1hq3_D 1u35_B 2aro_D 2cv5_B* 2f8n_B 3nqu_B 3r45_B 3azg_B 3a6n_B 3an2_B 3av1_B 3av2_B 3ayw_B 3aze_B 3azf_B 3afa_B 3azh_B 3azk_B ...
Probab=20.24 E-value=1.1e+02 Score=23.18 Aligned_cols=38 Identities=18% Similarity=0.211 Sum_probs=32.3
Q ss_pred eeChhHHHHHHHHcCCc-chHHHHHHHHHHHHHHHHhhc
Q 047223 184 TIGLDDIKLVKNAMNMT-INDVILGLTQAALSRYLHRRY 221 (348)
Q Consensus 184 ~~~l~~vk~ia~~~g~T-vNDVlla~~agAL~~yl~~~g 221 (348)
.+|.+.|+++++..|+. |++-..-.++..|..|+++--
T Consensus 29 gip~~~I~Rlar~~G~~rIs~~a~~~l~~vle~~~~~V~ 67 (103)
T 1tzy_D 29 GITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVI 67 (103)
T ss_dssp GSCHHHHHHHHHHTTCCEECTTHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHcCccccCHHHHHHHHHHHHHHHHHHH
Confidence 38999999999999885 888888888888888887643
No 42
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=20.11 E-value=98 Score=27.02 Aligned_cols=38 Identities=13% Similarity=0.226 Sum_probs=29.2
Q ss_pred EEEEeeChhHHHHHHHH----------cCCcchHHHHHHHHHHHHHHH
Q 047223 180 FVHRTIGLDDIKLVKNA----------MNMTINDVILGLTQAALSRYL 217 (348)
Q Consensus 180 ~~~~~~~l~~vk~ia~~----------~g~TvNDVlla~~agAL~~yl 217 (348)
..+.++++..+.+.+++ .+.|+|+.++-|++.||+++=
T Consensus 31 ~~~~evdvt~l~~~r~~~k~~~~~~~g~kls~~~~~ikA~~~Al~~~P 78 (233)
T 1scz_A 31 TTFNEVNMKPIMDLRKQYGEAFEKRHGIRLGFMSFYVKAVVEALKRYP 78 (233)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHHHHHSSCCCSHHHHHHHHHHHHHHCT
T ss_pred EEEEEEEcHHHHHHHHHHHhhhhhhcCCcccHHHHHHHHHHHHHHhCh
Confidence 34677887777665332 578999999999999998764
Done!