BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047225
(287 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224085219|ref|XP_002307519.1| predicted protein [Populus trichocarpa]
gi|222856968|gb|EEE94515.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/276 (68%), Positives = 228/276 (82%), Gaps = 3/276 (1%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG +DPN+PI+SFLFTGPTGVGKTELA ALA EYFGSKEA+VRIDMSEYMEKHT
Sbjct: 351 AIRRARVGTKDPNKPIASFLFTGPTGVGKTELAKALAVEYFGSKEAVVRIDMSEYMEKHT 410
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK FGSPPGY+G+++GGQ TEAVR R H+V+LFDEIEKAH+DV V LQ+LDDG +TDG
Sbjct: 411 VSKLFGSPPGYIGYDDGGQFTEAVRCRAHTVVLFDEIEKAHQDVNRVFLQILDDGTLTDG 470
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR---ESILGSDQMERGVAEELRRRFRPEFLNRIDEV 178
KG+ VD KNTIIIMTSNIG+S+IA+ E + + ++ VAEEL++ F PEFLNRIDEV
Sbjct: 471 KGRKVDFKNTIIIMTSNIGNSLIAQEDEEDEIRFNTVKLIVAEELKKEFSPEFLNRIDEV 530
Query: 179 IVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRA 238
IVFR+LN QL EI D+ML E+Y RL+AKN+ + VT K+K+IEEG N SYGARPL+RA
Sbjct: 531 IVFRKLNNAQLNEIADLMLAEVYGRLKAKNIIIRVTDGLKRKIIEEGNNLSYGARPLKRA 590
Query: 239 IGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
I RLLEDN+A+ IL G+++ G SV +D +S GNVIM
Sbjct: 591 IVRLLEDNIAKGILNGFVEEGRSVIVDVNSNGNVIM 626
>gi|255540075|ref|XP_002511102.1| ATP-dependent clp protease, putative [Ricinus communis]
gi|223550217|gb|EEF51704.1| ATP-dependent clp protease, putative [Ricinus communis]
Length = 924
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/292 (61%), Positives = 236/292 (80%), Gaps = 12/292 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGK+ELA ALA YFGS+EAM+R+DMSE+ME+HT
Sbjct: 622 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHT 681
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 682 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 741
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + E ++++ V EEL++ FRP
Sbjct: 742 KGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRP 801
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K+++ EI DIMLKE+++RL+ K++EL VT F+++++EEGYNPS
Sbjct: 802 EFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKVKDIELQVTERFRERVVEEGYNPS 861
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGS 281
YGARPLRRAI RLLED++AE +L G I+ GDSV +D DS GNVI+ +GS
Sbjct: 862 YGARPLRRAIMRLLEDSMAEKMLAGEIKEGDSVIVDVDSDGNVIVLNGSSGS 913
>gi|224136316|ref|XP_002322299.1| predicted protein [Populus trichocarpa]
gi|222869295|gb|EEF06426.1| predicted protein [Populus trichocarpa]
Length = 932
Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/291 (61%), Positives = 235/291 (80%), Gaps = 12/291 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGK+ELA ALA YFGS+EAM+R+DMSEYME+HT
Sbjct: 629 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEYMERHT 688
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V+K GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 689 VAKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNIMLQILEDGRLTDS 748
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + E ++++ V EEL++ FRP
Sbjct: 749 KGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDEKDSSYNRIKSLVTEELKQYFRP 808
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K+++ +I DIMLKE++ERL+AK +EL VT F+ ++++EGYNP+
Sbjct: 809 EFLNRLDEMIVFRQLTKLEVKDIADIMLKEVFERLKAKEIELQVTERFRDRVVDEGYNPA 868
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNG 280
YGARPLRRAI RLLED++AE +L+ I+ GDSV +D DS GNVI+ ++G
Sbjct: 869 YGARPLRRAIMRLLEDSMAEKMLSAEIKEGDSVIIDVDSDGNVIVLNGQSG 919
>gi|356508861|ref|XP_003523172.1| PREDICTED: chaperone protein ClpC, chloroplastic-like isoform 1
[Glycine max]
gi|356508863|ref|XP_003523173.1| PREDICTED: chaperone protein ClpC, chloroplastic-like isoform 2
[Glycine max]
Length = 922
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/292 (61%), Positives = 234/292 (80%), Gaps = 12/292 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGK+ELA ALA YFGS+EAM+R+DMSE+ME+HT
Sbjct: 621 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHT 680
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 681 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 740
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + E ++++ V EEL++ FRP
Sbjct: 741 KGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDEKDSSYNRIKSLVTEELKQYFRP 800
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K+++ EI DIMLKE++ERL+ K++EL VT F+ +++EEGYNPS
Sbjct: 801 EFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFERLKVKDIELQVTERFRDRVVEEGYNPS 860
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGS 281
YGARPLRRAI RLLED++AE +L I+ GDSV +D DS GNVI+ +G+
Sbjct: 861 YGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVIVLNGSSGA 912
>gi|118488171|gb|ABK95905.1| unknown [Populus trichocarpa]
Length = 835
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/291 (61%), Positives = 234/291 (80%), Gaps = 12/291 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGK+ELA ALA YFGS+EAM+R+DMSEYME+HT
Sbjct: 532 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEYMERHT 591
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V+K GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 592 VAKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNIMLQILEDGRLTDS 651
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + E ++++ V EEL++ FRP
Sbjct: 652 KGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDEKDSSYNRIKSLVTEELKQYFRP 711
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K+++ +I DIMLKE++ERL+AK +EL VT F ++++EGYNP+
Sbjct: 712 EFLNRLDEMIVFRQLTKLEVKDIADIMLKEVFERLKAKEIELQVTERFIDRVVDEGYNPA 771
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNG 280
YGARPLRRAI RLLED++AE +L+ I+ GDSV +D DS GNVI+ ++G
Sbjct: 772 YGARPLRRAIMRLLEDSMAEKMLSAEIKEGDSVIIDVDSDGNVIVLNGQSG 822
>gi|357520587|ref|XP_003630582.1| ATP-dependent Clp protease ATP-binding subunit clpA-like protein
[Medicago truncatula]
gi|355524604|gb|AET05058.1| ATP-dependent Clp protease ATP-binding subunit clpA-like protein
[Medicago truncatula]
Length = 926
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/292 (61%), Positives = 234/292 (80%), Gaps = 12/292 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGK+ELA ALA YFGS+EAM+R+DMSE+ME+HT
Sbjct: 625 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALASYYFGSEEAMIRLDMSEFMERHT 684
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 685 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 744
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + E ++++ V EEL++ FRP
Sbjct: 745 KGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRP 804
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K+++ EI DIMLKE++ERL+ K +EL+VT F++++++EGYNPS
Sbjct: 805 EFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFERLKTKEIELSVTERFRERVVDEGYNPS 864
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGS 281
YGARPLRRAI RLLED++AE +L I+ GDSV +D DS GNVI+ G+
Sbjct: 865 YGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDADSDGNVIVLNGSTGA 916
>gi|356513459|ref|XP_003525431.1| PREDICTED: chaperone protein ClpC, chloroplastic-like [Glycine max]
Length = 919
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/292 (60%), Positives = 236/292 (80%), Gaps = 12/292 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGK+ELA ALA YFGS+EAM+R+DMSE+ME+HT
Sbjct: 618 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHT 677
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 678 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 737
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + E ++++ V EEL++ FRP
Sbjct: 738 KGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDEKDSSYNRIKSLVTEELKQYFRP 797
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K+++ EI DIMLKE+++RL+AK ++L+VT F++++++EGYNPS
Sbjct: 798 EFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKAKEIDLSVTERFRERVVDEGYNPS 857
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGS 281
YGARPLRRAI RLLED++AE +L I+ GDSV +D DS GNVI+ +G+
Sbjct: 858 YGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDADSDGNVIVLNGSSGA 909
>gi|356516495|ref|XP_003526929.1| PREDICTED: chaperone protein ClpC, chloroplastic-like [Glycine max]
Length = 922
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/292 (61%), Positives = 234/292 (80%), Gaps = 12/292 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGK+ELA ALA YFGS+EAM+R+DMSE+ME+HT
Sbjct: 621 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHT 680
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 681 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 740
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + E ++++ V EEL++ FRP
Sbjct: 741 KGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDEKDSSYNRIKSLVTEELKQYFRP 800
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K+++ EI DIMLKE+++RL+ K++EL VT F+ +++EEGYNPS
Sbjct: 801 EFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKVKDIELQVTERFRDRVVEEGYNPS 860
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGS 281
YGARPLRRAI RLLED++AE +L I+ GDSV +D DS GNVI+ +G+
Sbjct: 861 YGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVIVLNGSSGA 912
>gi|147866973|emb|CAN78847.1| hypothetical protein VITISV_010724 [Vitis vinifera]
Length = 890
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/292 (60%), Positives = 234/292 (80%), Gaps = 12/292 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGK+ELA ALA YFGS+EAM+R+DMSE+ME+HT
Sbjct: 588 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHT 647
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 648 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 707
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + E ++++ V EEL++ FRP
Sbjct: 708 KGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRP 767
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K+++ +I DIMLKE++ERL+AK++EL VT F+ ++++EGYNPS
Sbjct: 768 EFLNRLDEMIVFRQLTKLEVKDIADIMLKEVFERLKAKDIELQVTERFRDRVVDEGYNPS 827
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGS 281
YGARPLRRAI RLLED++AE +L I+ GDSV +D DS GNV + +G+
Sbjct: 828 YGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGA 879
>gi|115458130|ref|NP_001052665.1| Os04g0397100 [Oryza sativa Japonica Group]
gi|113564236|dbj|BAF14579.1| Os04g0397100, partial [Oryza sativa Japonica Group]
Length = 403
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/291 (60%), Positives = 233/291 (80%), Gaps = 12/291 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGK+ELA ALA YFGS+EAM+R+DMSE+ME+HT
Sbjct: 102 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHT 161
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 162 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 221
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + E ++++ V EEL++ FRP
Sbjct: 222 KGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDEKDTSYNRIKSLVTEELKQYFRP 281
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K+++ EI DIMLKE+++RL+AK+++L VT F+ ++++EGYNPS
Sbjct: 282 EFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKAKDIDLQVTEKFRDRVVDEGYNPS 341
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNG 280
YGARPLRRAI RLLED+LAE +L G ++ GDS +D DS G VI+ +G
Sbjct: 342 YGARPLRRAIMRLLEDSLAEKMLAGEVKEGDSAIVDVDSEGKVIVLNGGSG 392
>gi|356527573|ref|XP_003532383.1| PREDICTED: chaperone protein ClpC, chloroplastic-like [Glycine max]
Length = 919
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/292 (60%), Positives = 236/292 (80%), Gaps = 12/292 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGK+ELA ALA YFGS+EAM+R+DMSE+ME+HT
Sbjct: 618 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHT 677
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 678 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 737
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + E ++++ V EEL++ FRP
Sbjct: 738 KGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDEKDSSYNRIKSLVTEELKQYFRP 797
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K+++ EI DIMLKE+++RL+AK ++L+VT F++++++EGYNPS
Sbjct: 798 EFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFQRLKAKEIDLSVTERFRERVVDEGYNPS 857
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGS 281
YGARPLRRAI +LLED++AE +L I+ GDSV +D DS GNVI+ +G+
Sbjct: 858 YGARPLRRAIMQLLEDSMAEKMLAREIKEGDSVIVDSDSEGNVIVLNGSSGA 909
>gi|242075576|ref|XP_002447724.1| hypothetical protein SORBIDRAFT_06g014590 [Sorghum bicolor]
gi|241938907|gb|EES12052.1| hypothetical protein SORBIDRAFT_06g014590 [Sorghum bicolor]
Length = 921
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/291 (60%), Positives = 232/291 (79%), Gaps = 12/291 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGK+ELA ALA YFGS+EAM+R+DMSE+ME+HT
Sbjct: 620 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHT 679
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 680 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 739
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + E ++++ V EEL++ FRP
Sbjct: 740 KGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDEKDTSYNRIKSLVTEELKQYFRP 799
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K+++ EI DIMLKE+++RL+AK++ L VT F+ ++++EGYNPS
Sbjct: 800 EFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKAKDINLQVTEKFRDRVVDEGYNPS 859
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNG 280
YGARPLRRAI RLLED+LAE +L G ++ GDS +D DS G VI+ +G
Sbjct: 860 YGARPLRRAIMRLLEDSLAEKMLAGEVKEGDSAIVDVDSDGKVIVLNGGSG 910
>gi|225456471|ref|XP_002284518.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpA
homolog CD4A, chloroplastic-like [Vitis vinifera]
Length = 923
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/292 (60%), Positives = 234/292 (80%), Gaps = 12/292 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGK+ELA ALA YFGS+EAM+R+DMSE+ME+HT
Sbjct: 621 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHT 680
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 681 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 740
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + E ++++ V EEL++ FRP
Sbjct: 741 KGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRP 800
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K+++ +I DIMLKE++ERL+AK++EL VT F+ ++++EGYNPS
Sbjct: 801 EFLNRLDEMIVFRQLTKLEVKDIADIMLKEVFERLKAKDIELQVTERFRDRVVDEGYNPS 860
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGS 281
YGARPLRRAI RLLED++AE +L I+ GDSV +D DS GNV + +G+
Sbjct: 861 YGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGA 912
>gi|347602486|sp|Q7F9I1.2|CLPC1_ORYSJ RecName: Full=Chaperone protein ClpC1, chloroplastic; AltName:
Full=ATP-dependent Clp protease ATP-binding subunit ClpC
homolog 1; AltName: Full=Casein lytic proteinase C1;
Flags: Precursor
Length = 918
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/291 (60%), Positives = 233/291 (80%), Gaps = 12/291 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGK+ELA ALA YFGS+EAM+R+DMSE+ME+HT
Sbjct: 617 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHT 676
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 677 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 736
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + E ++++ V EEL++ FRP
Sbjct: 737 KGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDEKDTSYNRIKSLVTEELKQYFRP 796
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K+++ EI DIMLKE+++RL+AK+++L VT F+ ++++EGYNPS
Sbjct: 797 EFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKAKDIDLQVTEKFRDRVVDEGYNPS 856
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNG 280
YGARPLRRAI RLLED+LAE +L G ++ GDS +D DS G VI+ +G
Sbjct: 857 YGARPLRRAIMRLLEDSLAEKMLAGEVKEGDSAIVDVDSEGKVIVLNGGSG 907
>gi|399213|sp|P31542.1|CLPAB_SOLLC RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA
homolog CD4B, chloroplastic; Flags: Precursor
gi|170435|gb|AAA34161.1| ATP-dependent protease (CD4B) [Solanum lycopersicum]
Length = 923
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/292 (60%), Positives = 232/292 (79%), Gaps = 12/292 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGK+ELA ALA YFGS+EAM+R+DMSE+ME+HT
Sbjct: 621 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHT 680
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 681 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 740
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + E ++++ V EEL++ FRP
Sbjct: 741 KGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDLDEKDSSYNRIKSLVTEELKQYFRP 800
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K+++ EI DIMLKE++ERL+ K +EL VT F+ ++++EGYNPS
Sbjct: 801 EFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFERLKVKEIELQVTERFRDRVVDEGYNPS 860
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGS 281
YGARPLRRAI RLLED++AE +L I+ GDSV +D DS GNV + +G+
Sbjct: 861 YGARPLRRAIMRLLEDSMAEKMLANEIKEGDSVIVDVDSDGNVTVLNGSSGT 912
>gi|449440498|ref|XP_004138021.1| PREDICTED: chaperone protein ClpC, chloroplastic-like [Cucumis
sativus]
Length = 929
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/292 (60%), Positives = 233/292 (79%), Gaps = 12/292 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGK+ELA ALA YFGS+EAM+R+DMSE+ME+HT
Sbjct: 628 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHT 687
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 688 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 747
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + E ++++ V EEL++ FRP
Sbjct: 748 KGRTVDFKNTLLIMTSNVGSSVIEKGGRRMGFDLDYDEKDSSYNRIKSLVTEELKQYFRP 807
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K+++ EI DIMLKE+++RL+AK ++L VT F+ +++EEGYNPS
Sbjct: 808 EFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKAKEIDLQVTERFRDRVVEEGYNPS 867
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGS 281
YGARPLRRAI RLLED++AE +L I+ GDSV +D DS GNV + +G+
Sbjct: 868 YGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGA 919
>gi|307136002|gb|ADN33858.1| ATP-dependent clp protease [Cucumis melo subsp. melo]
Length = 929
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/292 (60%), Positives = 233/292 (79%), Gaps = 12/292 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGK+ELA ALA YFGS+EAM+R+DMSE+ME+HT
Sbjct: 628 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHT 687
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 688 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 747
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + E ++++ V EEL++ FRP
Sbjct: 748 KGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRP 807
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K+++ EI DIMLKE+++RL+AK ++L VT F+ +++EEGYNPS
Sbjct: 808 EFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKAKEIDLQVTERFRDRVVEEGYNPS 867
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGS 281
YGARPLRRAI RLLED++AE +L I+ GDSV +D DS GNV + +G+
Sbjct: 868 YGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGA 919
>gi|38347158|emb|CAE05148.2| OSJNBa0039C07.4 [Oryza sativa Japonica Group]
Length = 888
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/291 (60%), Positives = 233/291 (80%), Gaps = 12/291 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGK+ELA ALA YFGS+EAM+R+DMSE+ME+HT
Sbjct: 587 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHT 646
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 647 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 706
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + E ++++ V EEL++ FRP
Sbjct: 707 KGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDEKDTSYNRIKSLVTEELKQYFRP 766
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K+++ EI DIMLKE+++RL+AK+++L VT F+ ++++EGYNPS
Sbjct: 767 EFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKAKDIDLQVTEKFRDRVVDEGYNPS 826
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNG 280
YGARPLRRAI RLLED+LAE +L G ++ GDS +D DS G VI+ +G
Sbjct: 827 YGARPLRRAIMRLLEDSLAEKMLAGEVKEGDSAIVDVDSEGKVIVLNGGSG 877
>gi|414587487|tpg|DAA38058.1| TPA: hypothetical protein ZEAMMB73_793135 [Zea mays]
Length = 896
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/285 (61%), Positives = 230/285 (80%), Gaps = 12/285 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGK+ELA ALA YFGS+EAM+R+DMSE+ME+HT
Sbjct: 595 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHT 654
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 655 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 714
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + E ++++ V EEL++ FRP
Sbjct: 715 KGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDEKDTSYNRIKSLVTEELKQYFRP 774
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K+++ EI DIMLKE+++RL+AK++ L VT F+ ++++EGYNPS
Sbjct: 775 EFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKAKDINLQVTEKFRDRVVDEGYNPS 834
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
YGARPLRRAI RLLED+LAE +L G ++ GDS +D DS G VI+
Sbjct: 835 YGARPLRRAIMRLLEDSLAEKMLAGEVKEGDSAIVDVDSDGKVIV 879
>gi|218186618|gb|EEC69045.1| hypothetical protein OsI_37876 [Oryza sativa Indica Group]
Length = 1412
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/291 (60%), Positives = 234/291 (80%), Gaps = 12/291 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++ RARVG+++PNRPI+SF+F GPTGVGK+ELA ALA YFGS+EAM+R+DMSE+ME+HT
Sbjct: 1111 SIRRARVGLKNPNRPIASFIFAGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHT 1170
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 1171 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 1230
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + E +++ V EE+++ FRP
Sbjct: 1231 KGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDEKDSSYSRIKSLVVEEMKQYFRP 1290
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K+++ EI +IMLKE+++RL+AK+++L VT FK+++++EG+NPS
Sbjct: 1291 EFLNRLDEMIVFRQLTKLEVKEIAEIMLKEVFDRLKAKDIDLQVTEKFKERIVDEGFNPS 1350
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNG 280
YGARPLRRAI RLLED+LAE +L G ++ GDS +D DS G VI+ ++G
Sbjct: 1351 YGARPLRRAIMRLLEDSLAEKMLAGEVKEGDSAIVDVDSEGKVIVLNGQSG 1401
>gi|449529856|ref|XP_004171914.1| PREDICTED: LOW QUALITY PROTEIN: chaperone protein ClpC,
chloroplastic-like, partial [Cucumis sativus]
Length = 458
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/292 (60%), Positives = 232/292 (79%), Gaps = 12/292 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGK+ELA ALA YFGS+EAM+R+DMSE+ME+HT
Sbjct: 157 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHT 216
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ L+DGR+TD
Sbjct: 217 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQFLEDGRLTDS 276
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + E ++++ V EEL++ FRP
Sbjct: 277 KGRTVDFKNTLLIMTSNVGSSVIEKGGRRMGFDLDYDEKDSSYNRIKSLVTEELKQYFRP 336
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K+++ EI DIMLKE+++RL+AK ++L VT F+ +++EEGYNPS
Sbjct: 337 EFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKAKEIDLQVTERFRDRVVEEGYNPS 396
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGS 281
YGARPLRRAI RLLED++AE +L I+ GDSV +D DS GNV + +G+
Sbjct: 397 YGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGA 448
>gi|357149201|ref|XP_003575034.1| PREDICTED: chaperone protein ClpC1, chloroplastic-like
[Brachypodium distachyon]
Length = 879
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/291 (60%), Positives = 232/291 (79%), Gaps = 12/291 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGK+ELA ALA YFGS+EAM+R+DMSE+ME+HT
Sbjct: 578 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALASYYFGSEEAMIRLDMSEFMERHT 637
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 638 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 697
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + E ++++ V EEL++ FRP
Sbjct: 698 KGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDEKDTSYNRIKSLVTEELKQYFRP 757
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K+++ EI DIMLKE+++RL+AK ++L VT F+ ++++EGYNPS
Sbjct: 758 EFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKAKEIDLQVTERFRDRVVDEGYNPS 817
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNG 280
YGARPLRRAI RLLED+LAE +L G ++ GDS +D DS G VI+ +G
Sbjct: 818 YGARPLRRAIMRLLEDSLAEKMLAGEVKEGDSAIVDVDSEGKVIVLNSGSG 868
>gi|125590233|gb|EAZ30583.1| hypothetical protein OsJ_14634 [Oryza sativa Japonica Group]
Length = 1033
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/291 (60%), Positives = 233/291 (80%), Gaps = 12/291 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGK+ELA ALA YFGS+EAM+R+DMSE+ME+HT
Sbjct: 732 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHT 791
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 792 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 851
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + E ++++ V EEL++ FRP
Sbjct: 852 KGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDEKDTSYNRIKSLVTEELKQYFRP 911
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K+++ EI DIMLKE+++RL+AK+++L VT F+ ++++EGYNPS
Sbjct: 912 EFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKAKDIDLQVTEKFRDRVVDEGYNPS 971
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNG 280
YGARPLRRAI RLLED+LAE +L G ++ GDS +D DS G VI+ +G
Sbjct: 972 YGARPLRRAIMRLLEDSLAEKMLAGEVKEGDSAIVDVDSEGKVIVLNGGSG 1022
>gi|293332601|ref|NP_001169540.1| uncharacterized protein LOC100383416 [Zea mays]
gi|224029989|gb|ACN34070.1| unknown [Zea mays]
gi|413916758|gb|AFW56690.1| cytokinin inducible protease1 [Zea mays]
Length = 921
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/291 (60%), Positives = 233/291 (80%), Gaps = 12/291 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++ RARVG+++PNRPI+SF+F GPTGVGK+ELA ALA YFGS+EAM+R+DMSE+ME+HT
Sbjct: 620 SIRRARVGLKNPNRPIASFIFAGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHT 679
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 680 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 739
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARES-----ILGSDQMERG-------VAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + L SD+ + V EE+++ FRP
Sbjct: 740 KGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDSDEKDSSYSRIKSLVIEEMKQYFRP 799
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K+++ EI DIML+E+++RL+AK++ L VT FK+++++EGYNPS
Sbjct: 800 EFLNRLDEMIVFRQLTKLEVKEIADIMLQEVFDRLKAKDINLQVTEKFKERVVDEGYNPS 859
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNG 280
YGARPLRRAI RLLED+LAE +L G ++ GDS +D DS G V++ + G
Sbjct: 860 YGARPLRRAIMRLLEDSLAEKMLAGEVKEGDSAIVDVDSEGKVVVLNGQGG 910
>gi|413918180|gb|AFW58112.1| hypothetical protein ZEAMMB73_120778 [Zea mays]
Length = 921
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/291 (60%), Positives = 231/291 (79%), Gaps = 12/291 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGK+ELA ALA YFGS+EAM+R+DMSE+ME+HT
Sbjct: 620 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHT 679
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 680 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 739
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + E ++++ V EEL++ FRP
Sbjct: 740 KGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDEKDTSYNRIKSLVTEELKQYFRP 799
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K+++ EI DIMLKE+++RL+AK + L VT F+ ++++EGYNPS
Sbjct: 800 EFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKAKEINLQVTEKFRDRVVDEGYNPS 859
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNG 280
YGARPLRRAI RLLED+LAE +L G ++ GDS +D DS G VI+ +G
Sbjct: 860 YGARPLRRAIMRLLEDSLAEKMLAGEVKEGDSAIVDVDSDGKVIVLNGGSG 910
>gi|18423214|ref|NP_568746.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Arabidopsis
thaliana]
gi|75170759|sp|Q9FI56.1|CLPC1_ARATH RecName: Full=Chaperone protein ClpC1, chloroplastic; AltName:
Full=ATP-dependent Clp protease ATP-binding subunit ClpC
homolog 1; AltName: Full=Casein lytic proteinase C1;
AltName: Full=Protein DE-REGULATED CAO ACCUMULATION 1;
AltName: Full=Protein IRON-RESCUED MUTANT 1; Flags:
Precursor
gi|9758239|dbj|BAB08738.1| ATP-dependent Clp protease, ATP-binding subunit [Arabidopsis
thaliana]
gi|20856956|gb|AAM26692.1| AT5g50920/K3K7_7 [Arabidopsis thaliana]
gi|110742601|dbj|BAE99213.1| ATP-dependent Clp protease [Arabidopsis thaliana]
gi|332008628|gb|AED96011.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Arabidopsis
thaliana]
Length = 929
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/296 (60%), Positives = 234/296 (79%), Gaps = 12/296 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGK+ELA ALA YFGS+EAM+R+DMSE+ME+HT
Sbjct: 623 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHT 682
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 683 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 742
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + E ++++ V EEL++ FRP
Sbjct: 743 KGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRP 802
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K+++ EI DI+LKE++ERL+ K +EL VT FK+++++EGYNPS
Sbjct: 803 EFLNRLDEMIVFRQLTKLEVKEIADILLKEVFERLKKKEIELQVTERFKERVVDEGYNPS 862
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMTVC 285
YGARPLRRAI RLLED++AE +L I+ GDSV +D D+ GNV + +G+ T
Sbjct: 863 YGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDAEGNVTVLNGGSGTPTTS 918
>gi|297795893|ref|XP_002865831.1| heat shock protein 93-V [Arabidopsis lyrata subsp. lyrata]
gi|297311666|gb|EFH42090.1| heat shock protein 93-V [Arabidopsis lyrata subsp. lyrata]
Length = 929
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/296 (60%), Positives = 234/296 (79%), Gaps = 12/296 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGK+ELA ALA YFGS+EAM+R+DMSE+ME+HT
Sbjct: 623 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHT 682
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 683 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 742
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + E ++++ V EEL++ FRP
Sbjct: 743 KGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRP 802
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K+++ EI DI+LKE++ERL+ K +EL VT FK+++++EGYNPS
Sbjct: 803 EFLNRLDEMIVFRQLTKLEVKEIADILLKEVFERLKKKEIELQVTERFKERVVDEGYNPS 862
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMTVC 285
YGARPLRRAI RLLED++AE +L I+ GDSV +D D+ GNV + +G+ T
Sbjct: 863 YGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDAEGNVTVLNGGSGTPTTS 918
>gi|115487910|ref|NP_001066442.1| Os12g0230100 [Oryza sativa Japonica Group]
gi|122248633|sp|Q2QVG9.2|CLPC2_ORYSJ RecName: Full=Chaperone protein ClpC2, chloroplastic; AltName:
Full=ATP-dependent Clp protease ATP-binding subunit ClpC
homolog 2; AltName: Full=Casein lytic proteinase C2;
Flags: Precursor
gi|108862366|gb|ABA96309.2| ATP-dependent Clp protease ATP-binding subunit clpA
CD4B,chloroplast precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|108862367|gb|ABG21929.1| ATP-dependent Clp protease ATP-binding subunit clpA
CD4B,chloroplast precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648949|dbj|BAF29461.1| Os12g0230100 [Oryza sativa Japonica Group]
Length = 919
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/291 (60%), Positives = 234/291 (80%), Gaps = 12/291 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++ RARVG+++PNRPI+SF+F GPTGVGK+ELA ALA YFGS+EAM+R+DMSE+ME+HT
Sbjct: 618 SIRRARVGLKNPNRPIASFIFAGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHT 677
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 678 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 737
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + E +++ V EE+++ FRP
Sbjct: 738 KGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDEKDSSYSRIKSLVVEEMKQYFRP 797
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K+++ EI +IMLKE+++RL+AK+++L VT FK+++++EG+NPS
Sbjct: 798 EFLNRLDEMIVFRQLTKLEVKEIAEIMLKEVFDRLKAKDIDLQVTEKFKERIVDEGFNPS 857
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNG 280
YGARPLRRAI RLLED+LAE +L G ++ GDS +D DS G VI+ ++G
Sbjct: 858 YGARPLRRAIMRLLEDSLAEKMLAGEVKEGDSAIVDVDSEGKVIVLNGQSG 908
>gi|461753|sp|P35100.1|CLPC_PEA RecName: Full=Chaperone protein ClpC, chloroplastic; AltName:
Full=ATP-dependent Clp protease ATP-binding subunit ClpC
homolog; AltName: Full=Casein lytic proteinase C; Flags:
Precursor
gi|169128|gb|AAA33680.1| nuclear encoded precursor to chloroplast protein [Pisum sativum]
Length = 922
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/292 (60%), Positives = 232/292 (79%), Gaps = 12/292 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGK+ELA ALA YFGS+EAM+R+DMSE+ME+HT
Sbjct: 621 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHT 680
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 681 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 740
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + E ++++ V EEL++ FRP
Sbjct: 741 KGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRP 800
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K+++ EI DIMLKE+++RL+ K +EL VT F+ ++++EGYNPS
Sbjct: 801 EFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFQRLKTKEIELQVTERFRDRVVDEGYNPS 860
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGS 281
YGARPLRRAI RLLED++AE +L I+ GDSV +D DS G VI+ +G+
Sbjct: 861 YGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGKVIVLNGSSGT 912
>gi|357149204|ref|XP_003575035.1| PREDICTED: chaperone protein ClpC1, chloroplastic-like
[Brachypodium distachyon]
Length = 921
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/291 (60%), Positives = 231/291 (79%), Gaps = 12/291 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGK+ELA ALA YFGS+EAM+R+DMSE+ME+HT
Sbjct: 620 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALASYYFGSEEAMIRLDMSEFMERHT 679
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 680 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 739
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + E ++++ V EEL++ FRP
Sbjct: 740 KGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDEKDTSYNRIKSLVTEELKQYFRP 799
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K+++ EI DIMLKE+++RL+ K ++L VT F+ ++++EGYNPS
Sbjct: 800 EFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKVKEIDLQVTERFRDRVVDEGYNPS 859
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNG 280
YGARPLRRAI RLLED+LAE +L G ++ GDS +D DS G VI+ +G
Sbjct: 860 YGARPLRRAIMRLLEDSLAEKMLAGEVKEGDSAIVDVDSEGKVIVLNSGSG 910
>gi|168028746|ref|XP_001766888.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681867|gb|EDQ68290.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 836
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/294 (59%), Positives = 232/294 (78%), Gaps = 12/294 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGK+ELA +LA YFGS+EAMVR+DMSE+ME+HT
Sbjct: 531 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKSLASYYFGSEEAMVRLDMSEFMERHT 590
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 591 VSKLIGSPPGYVGYSEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 650
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + E ++++ V EEL++ FRP
Sbjct: 651 KGRTVDFKNTLLIMTSNVGSSVIEKGGGGIGFQLDYGEKDSSYNRIKSLVNEELKQYFRP 710
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K+++ EI DIMLKE++ERL+ K ++L VT F+ +++EEGY+PS
Sbjct: 711 EFLNRLDEIIVFRQLTKLEVKEIADIMLKEVFERLKKKEIDLQVTERFRDRVVEEGYSPS 770
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMT 283
YGARPLRRAI RLLED++AE +L+G I+ GDS +D D GNV + G+ +
Sbjct: 771 YGARPLRRAIMRLLEDSMAERMLSGEIKEGDSAIIDVDGDGNVTVLNGTTGTSS 824
>gi|302763781|ref|XP_002965312.1| hypothetical protein SELMODRAFT_439163 [Selaginella moellendorffii]
gi|300167545|gb|EFJ34150.1| hypothetical protein SELMODRAFT_439163 [Selaginella moellendorffii]
Length = 937
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/297 (59%), Positives = 233/297 (78%), Gaps = 12/297 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGK+ELA ALA YFGS+EAMVR+DMSE+ME+HT
Sbjct: 633 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMVRLDMSEFMERHT 692
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 693 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 752
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + E ++++ V EEL++ FRP
Sbjct: 753 KGRTVDFKNTLLIMTSNVGSSVIEKGGGGIGFQLDYGEKDSSYNRIKTLVNEELKQYFRP 812
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K ++ EI DIMLKE++ERL+ K ++L VT F+ ++++EGY+PS
Sbjct: 813 EFLNRLDEIIVFRQLTKTEVKEIADIMLKEVFERLKKKEIDLQVTERFRDRVVDEGYSPS 872
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMTVCA 286
YGARPLRRAI RLLED++AE +L+G ++ GDS +D DS GNV + G+ + +
Sbjct: 873 YGARPLRRAIMRLLEDSMAERMLSGEVKEGDSAIIDVDSEGNVTVLNGTAGTASSSS 929
>gi|168007899|ref|XP_001756645.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692241|gb|EDQ78599.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 933
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/285 (61%), Positives = 229/285 (80%), Gaps = 12/285 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGK+ELA ALA YFGS+EAMVR+DMSE+ME+HT
Sbjct: 628 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALASYYFGSEEAMVRLDMSEFMERHT 687
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 688 VSKLIGSPPGYVGYSEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 747
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + E ++++ V EEL++ FRP
Sbjct: 748 KGRTVDFKNTLLIMTSNVGSSVIEKGGGGIGFQLDYGEKDSSYNRIKSLVNEELKQYFRP 807
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K+++ EI DIMLKE++ERL+ K ++L VT F+ ++++EGY+PS
Sbjct: 808 EFLNRLDEIIVFRQLTKLEVKEIADIMLKEVFERLKKKEIDLQVTERFRDRVVDEGYSPS 867
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
YGARPLRRAI RLLED++AE +L+G I+ GDS +D D GNV +
Sbjct: 868 YGARPLRRAIMRLLEDSMAERMLSGEIKEGDSAIIDVDGDGNVTV 912
>gi|302790788|ref|XP_002977161.1| hypothetical protein SELMODRAFT_176012 [Selaginella moellendorffii]
gi|300155137|gb|EFJ21770.1| hypothetical protein SELMODRAFT_176012 [Selaginella moellendorffii]
Length = 901
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/297 (59%), Positives = 233/297 (78%), Gaps = 12/297 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGK+ELA ALA YFGS+EAMVR+DMSE+ME+HT
Sbjct: 597 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMVRLDMSEFMERHT 656
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 657 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 716
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + E ++++ V EEL++ FRP
Sbjct: 717 KGRTVDFKNTLLIMTSNVGSSVIEKGGGGIGFQLDYGEKDSSYNRIKTLVNEELKQYFRP 776
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K ++ EI DIMLKE++ERL+ K ++L VT F+ ++++EGY+PS
Sbjct: 777 EFLNRLDEIIVFRQLTKTEVKEIADIMLKEVFERLKKKEIDLQVTERFRDRVVDEGYSPS 836
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMTVCA 286
YGARPLRRAI RLLED++AE +L+G ++ GDS +D DS GNV + G+ + +
Sbjct: 837 YGARPLRRAIMRLLEDSMAERMLSGEVKEGDSAIIDVDSEGNVTVLNGTAGTASSSS 893
>gi|326514880|dbj|BAJ99801.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 920
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/291 (61%), Positives = 231/291 (79%), Gaps = 12/291 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++ RARVG++ PNRPI+SF+F GPTGVGK+ELA LA YFGS+EAM+R+DMSE+ME+HT
Sbjct: 619 SVRRARVGLKSPNRPIASFIFAGPTGVGKSELAKTLASYYFGSEEAMIRLDMSEFMERHT 678
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP+SV+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 679 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYSVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 738
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARES-----ILGSDQMERG-------VAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + L SD+ + V EE+++ FRP
Sbjct: 739 KGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDSDEKDSSYGRIKSLVVEEMKQYFRP 798
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K+++ EI +IML+E++ RL++K++ L VT FK+++++EGYNPS
Sbjct: 799 EFLNRLDEMIVFRQLTKLEVKEIANIMLQEVFTRLKSKDINLQVTEKFKERVVDEGYNPS 858
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNG 280
YGARPLRRAI RLLED+LAE IL G ++ GDSV +D DS G VI+ +G
Sbjct: 859 YGARPLRRAIMRLLEDSLAEKILGGEVKEGDSVIVDVDSEGKVIVLNGESG 909
>gi|168026983|ref|XP_001766010.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682653|gb|EDQ69069.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 836
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/294 (59%), Positives = 232/294 (78%), Gaps = 12/294 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGK+ELA +LA YFGS+EAMVR+DMSE+ME+HT
Sbjct: 531 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKSLASYYFGSEEAMVRLDMSEFMERHT 590
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 591 VSKLIGSPPGYVGYSEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 650
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + E ++++ V EEL++ FRP
Sbjct: 651 KGRTVDFKNTLLIMTSNVGSSVIEKGGGGIGFQLDYGEKDSSYNRIKSLVNEELKQYFRP 710
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K+++ EI DIMLKE++ERL+ K ++L VT F+ ++++EGY+PS
Sbjct: 711 EFLNRLDEIIVFRQLTKLEVKEIADIMLKEVFERLKKKEIDLQVTERFRDRVVDEGYSPS 770
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMT 283
YGARPLRRAI RLLED++AE +L+G I+ GDS +D D GNV + G+ +
Sbjct: 771 YGARPLRRAIMRLLEDSMAERMLSGEIKEGDSAIIDVDGDGNVTVLNGTTGTAS 824
>gi|357160412|ref|XP_003578756.1| PREDICTED: chaperone protein ClpC2, chloroplastic-like
[Brachypodium distachyon]
Length = 920
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/291 (61%), Positives = 230/291 (79%), Gaps = 12/291 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++ RARVG+++PNRPI+SF+F GPTGVGK+ELA ALA YFGS+EAM+R+DMSE+ME+HT
Sbjct: 619 SVRRARVGLKNPNRPIASFIFAGPTGVGKSELAKALASYYFGSEEAMIRLDMSEFMERHT 678
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP+SV+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 679 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYSVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 738
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARES-----ILGSDQMERG-------VAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + L SD+ + V EE+++ FRP
Sbjct: 739 KGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDSDEKDSSYGRIKSLVVEEMKQYFRP 798
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K+++ +I +IML E++ RL+AK + L VT FK+++++EGYNPS
Sbjct: 799 EFLNRLDEMIVFRQLTKLEVKDIAEIMLLEVFNRLKAKEINLQVTEKFKERVVDEGYNPS 858
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNG 280
YGARPLRRAI RLLED+LAE IL G ++ GDS +D DS G VI+ +G
Sbjct: 859 YGARPLRRAIMRLLEDSLAEKILAGEVKEGDSAIVDVDSEGKVIVLNGESG 909
>gi|449470390|ref|XP_004152900.1| PREDICTED: chaperone protein ClpC, chloroplastic-like [Cucumis
sativus]
gi|449505877|ref|XP_004162592.1| PREDICTED: chaperone protein ClpC, chloroplastic-like [Cucumis
sativus]
Length = 924
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/292 (60%), Positives = 231/292 (79%), Gaps = 12/292 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGK+ELA ALA YFGS+EAM+R+DMSE+ME+HT
Sbjct: 622 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHT 681
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 682 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 741
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + E +++ V EEL++ FRP
Sbjct: 742 KGRTVDFKNTLLIMTSNVGSSVIEKGGRRMGFDLDYDEKDSSYTRIKSLVTEELKQYFRP 801
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K+++ EI DIMLKE+++RL+ K ++L VT F+ ++++EGYNPS
Sbjct: 802 EFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKGKEIDLQVTERFRDRVVDEGYNPS 861
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGS 281
YGARPLRRAI RLLED++AE +L I+ GDSV +D DS GNV + +G+
Sbjct: 862 YGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGA 913
>gi|168053476|ref|XP_001779162.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669421|gb|EDQ56008.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 922
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/282 (61%), Positives = 227/282 (80%), Gaps = 12/282 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGK+ELA ALA YFGS+EAMVR+DMSE+ME+HT
Sbjct: 631 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALASYYFGSEEAMVRLDMSEFMERHT 690
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 691 VSKLIGSPPGYVGYSEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 750
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + E ++++ V EEL++ FRP
Sbjct: 751 KGRTVDFKNTLLIMTSNVGSSVIEKGGGGIGFQLDYGEKDSSYNRIKSLVNEELKQYFRP 810
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K+++ EI DIMLKE++ERL+ K ++L VT F+ ++++EGY+PS
Sbjct: 811 EFLNRLDEIIVFRQLTKLEVKEIADIMLKEVFERLKKKEIDLQVTERFRDRVVDEGYSPS 870
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGN 271
YGARPLRRAI RLLED++AE +L+G I+ GDS +D DS N
Sbjct: 871 YGARPLRRAIMRLLEDSMAERMLSGEIKEGDSAIIDVDSDAN 912
>gi|399212|sp|P31541.1|CLPAA_SOLLC RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA
homolog CD4A, chloroplastic; Flags: Precursor
gi|170433|gb|AAA34160.1| ATP-dependent protease (CD4A) [Solanum lycopersicum]
Length = 926
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/297 (59%), Positives = 233/297 (78%), Gaps = 12/297 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGK+ELA +LA YFGS+EAM+R+DMSE+ME+HT
Sbjct: 624 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKSLATYYFGSEEAMIRLDMSEFMERHT 683
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 684 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 743
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + E ++++ V EEL++ FRP
Sbjct: 744 KGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDFDEKDSSYNRIKSLVTEELKQYFRP 803
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+ E+IVFRQL K+++ EI DIMLKE++ RL+ K +EL VT F+ ++++EGYNPS
Sbjct: 804 EFLNRLSEMIVFRQLTKLEVKEIADIMLKEVFVRLKNKEIELQVTERFRDRVVDEGYNPS 863
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMTVCA 286
YGARPLRRAI RLLED++AE +L G I+ GDSV +D DS GNV + +G+ + A
Sbjct: 864 YGARPLRRAIMRLLEDSMAEKMLAGEIKEGDSVIVDVDSDGNVTVLNGTSGAPSDSA 920
>gi|294464851|gb|ADE77931.1| unknown [Picea sitchensis]
Length = 323
Score = 367 bits (941), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 177/297 (59%), Positives = 229/297 (77%), Gaps = 12/297 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGK+ELA ALA YFGS+EAM+R+DMSE+ME+HT
Sbjct: 22 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHT 81
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 82 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 141
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + E +++ V EEL++ FRP
Sbjct: 142 KGRTVDFKNTLLIMTSNVGSSVIEKGGRGIGFQLDYDEKDSSYTRIKSLVNEELKQYFRP 201
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K ++ EI DIML+E++ERL+ K + L VT F ++++EGY+PS
Sbjct: 202 EFLNRLDEMIVFRQLTKTEVKEIADIMLREVFERLKTKEIGLQVTERFTDRVVDEGYSPS 261
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMTVCA 286
YGARPLRRAI RLLED+LAE +L G I+ GDS +D D GNVI+ + G+ A
Sbjct: 262 YGARPLRRAIMRLLEDSLAEKMLAGEIKEGDSAIVDVDGEGNVIVLNGKTGTAGPSA 318
>gi|2921158|gb|AAC04687.1| ClpC [Arabidopsis thaliana]
Length = 928
Score = 366 bits (940), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 176/296 (59%), Positives = 232/296 (78%), Gaps = 12/296 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGK+ELA ALA YFGS+EAM+R+DMSE+ME+HT
Sbjct: 622 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHT 681
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS GS PGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 682 VSTLIGSLPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 741
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + E ++++ V EEL++ FRP
Sbjct: 742 KGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRP 801
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K+++ EI DI+LKE++ERL+ K +EL VT FK+++++EGYNPS
Sbjct: 802 EFLNRLDEMIVFRQLTKLEVKEIADILLKEVFERLKKKEIELQVTERFKERVVDEGYNPS 861
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMTVC 285
YGARPLRRAI RLLED++AE +L I+ GDSV +D D+ GNV + +G+ T
Sbjct: 862 YGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDAEGNVTVLNGGSGTPTTS 917
>gi|186510816|ref|NP_566912.2| Clp ATPase [Arabidopsis thaliana]
gi|75213256|sp|Q9SXJ7.1|CLPC2_ARATH RecName: Full=Chaperone protein ClpC2, chloroplastic; AltName:
Full=ATP-dependent Clp protease ATP-binding subunit ClpC
homolog 2; AltName: Full=AtClpC; AltName: Full=Casein
lytic proteinase C2; Flags: Precursor
gi|5360574|dbj|BAA82062.1| AtClpC [Arabidopsis thaliana]
gi|332644945|gb|AEE78466.1| Clp ATPase [Arabidopsis thaliana]
Length = 952
Score = 366 bits (940), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 174/291 (59%), Positives = 231/291 (79%), Gaps = 12/291 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGK+ELA ALA YFGS+EAM+R+DMSE+ME+HT
Sbjct: 644 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHT 703
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++++LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 704 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDS 763
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + E ++++ V EEL++ FRP
Sbjct: 764 KGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDHDEKDSSYNRIKSLVTEELKQYFRP 823
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K+++ EI DIMLKE+ RLE K +EL VT FK+++++EG++PS
Sbjct: 824 EFLNRLDEMIVFRQLTKLEVKEIADIMLKEVVARLEVKEIELQVTERFKERVVDEGFDPS 883
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNG 280
YGARPLRRAI RLLED++AE +L+ I+ GDSV +D D+ G+V++ G
Sbjct: 884 YGARPLRRAIMRLLEDSMAEKMLSRDIKEGDSVIVDVDAEGSVVVLSGTTG 934
>gi|7576225|emb|CAB87915.1| AtClpC [Arabidopsis thaliana]
Length = 952
Score = 366 bits (940), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 174/291 (59%), Positives = 231/291 (79%), Gaps = 12/291 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGK+ELA ALA YFGS+EAM+R+DMSE+ME+HT
Sbjct: 644 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHT 703
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++++LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 704 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDS 763
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + E ++++ V EEL++ FRP
Sbjct: 764 KGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDHDEKDSSYNRIKSLVTEELKQYFRP 823
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K+++ EI DIMLKE+ RLE K +EL VT FK+++++EG++PS
Sbjct: 824 EFLNRLDEMIVFRQLTKLEVKEIADIMLKEVVARLEVKEIELQVTERFKERVVDEGFDPS 883
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNG 280
YGARPLRRAI RLLED++AE +L+ I+ GDSV +D D+ G+V++ G
Sbjct: 884 YGARPLRRAIMRLLEDSMAEKMLSRDIKEGDSVIVDVDAEGSVVVLSGTTG 934
>gi|33240557|ref|NP_875499.1| Clp protease ATP-binding subunit [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|33238085|gb|AAQ00152.1| ATPase with chaperone activity ATP-binding subunit [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
Length = 856
Score = 366 bits (940), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 175/286 (61%), Positives = 229/286 (80%), Gaps = 13/286 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 554 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEFMERHT 613
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGF GGQLTEAVR RP++V+LFDEIEKAH DV N++LQLL++GR+TD
Sbjct: 614 VSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEEGRLTDS 673
Query: 122 KGQTVDLKNTIIIMTSNIGDSVI-----------ARESILGS--DQMERGVAEELRRRFR 168
KG+TVD KNT+IIMTSNIG VI A ES+ S ++++ V EEL++ FR
Sbjct: 674 KGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEMAGESVEDSQYNRIKSLVNEELKQYFR 733
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNR+DE+IVFRQL +M++ +I +IMLKE++ R++ K + L+V+ FK++L+EEGYNP
Sbjct: 734 PEFLNRLDEIIVFRQLTRMEVKDIAEIMLKEVFSRIKDKGITLSVSEAFKERLVEEGYNP 793
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
SYGARPLRRA+ RLLED+LAE +L+G I+ GD +D D NVI+
Sbjct: 794 SYGARPLRRAVMRLLEDSLAEEVLSGKIKDGDQAEVDIDENKNVIV 839
>gi|334185828|ref|NP_001190035.1| Clp ATPase [Arabidopsis thaliana]
gi|332644946|gb|AEE78467.1| Clp ATPase [Arabidopsis thaliana]
Length = 921
Score = 366 bits (940), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 174/291 (59%), Positives = 231/291 (79%), Gaps = 12/291 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGK+ELA ALA YFGS+EAM+R+DMSE+ME+HT
Sbjct: 613 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHT 672
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++++LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 673 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDS 732
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + E ++++ V EEL++ FRP
Sbjct: 733 KGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDHDEKDSSYNRIKSLVTEELKQYFRP 792
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K+++ EI DIMLKE+ RLE K +EL VT FK+++++EG++PS
Sbjct: 793 EFLNRLDEMIVFRQLTKLEVKEIADIMLKEVVARLEVKEIELQVTERFKERVVDEGFDPS 852
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNG 280
YGARPLRRAI RLLED++AE +L+ I+ GDSV +D D+ G+V++ G
Sbjct: 853 YGARPLRRAIMRLLEDSMAEKMLSRDIKEGDSVIVDVDAEGSVVVLSGTTG 903
>gi|384250946|gb|EIE24424.1| hypothetical protein COCSUDRAFT_28166 [Coccomyxa subellipsoidea
C-169]
Length = 849
Score = 366 bits (939), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 175/283 (61%), Positives = 226/283 (79%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGK+ELA LA YFGS+EAMVR+DMSE+ME+HT
Sbjct: 546 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMVRLDMSEFMERHT 605
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 606 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 665
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT+IIMTSN+G SVI + E ++++ V EEL++ FRP
Sbjct: 666 KGRTVDFKNTLIIMTSNVGSSVIEKGGGGLGFQLDTSEEDSSYNRIKTLVNEELKQYFRP 725
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL+K ++ EI DIML E+++R E K +++ VT FK +L+EEGYNP+
Sbjct: 726 EFLNRLDEIIVFRQLSKSEVKEIADIMLTEVFKRAEIKGIKIDVTERFKDRLVEEGYNPA 785
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED++AE +L+G I+ GDSV +D D+ G V
Sbjct: 786 YGARPLRRAIMRLLEDSMAERMLSGDIKEGDSVIIDVDADGQV 828
>gi|354567441|ref|ZP_08986610.1| ATPase AAA-2 domain protein [Fischerella sp. JSC-11]
gi|353542713|gb|EHC12174.1| ATPase AAA-2 domain protein [Fischerella sp. JSC-11]
Length = 851
Score = 366 bits (939), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 176/283 (62%), Positives = 223/283 (78%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTELA ALA +FGS+EAM+R+DMSEYME+HT
Sbjct: 553 AIRRARVGLKNPNRPIASFVFSGPTGVGKTELAKALASYFFGSEEAMIRLDMSEYMERHT 612
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 613 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 672
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARES-----ILGSDQMERG-------VAEELRRRFRP 169
KG+TVD KNT++I+TSNIG VI + DQ E V EEL+ FRP
Sbjct: 673 KGRTVDFKNTLLILTSNIGSKVIEKGGGGIGFEFAEDQSESQYNRIKFLVNEELKNYFRP 732
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQLNK ++M+I DIML+E++ RL K + L V+ FK++L++EGYNPS
Sbjct: 733 EFLNRLDEIIVFRQLNKEEVMQIADIMLREVFGRLTEKGINLEVSDRFKERLLQEGYNPS 792
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED+LAE IL+G I+ GD+ +D D GN+
Sbjct: 793 YGARPLRRAIMRLLEDSLAEEILSGRIKEGDTAIVDVDESGNI 835
>gi|427734429|ref|YP_007053973.1| chaperone ATPase [Rivularia sp. PCC 7116]
gi|427369470|gb|AFY53426.1| ATPase with chaperone activity, ATP-binding subunit [Rivularia sp.
PCC 7116]
Length = 831
Score = 365 bits (938), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 173/290 (59%), Positives = 230/290 (79%), Gaps = 12/290 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTELA +LA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 524 AIRRARVGLKNPNRPIASFVFSGPTGVGKTELAKSLASYFFGSEEAMIRLDMSEFMERHT 583
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 584 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 643
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++I+TSNIG VI + S ++++ V EEL++ FRP
Sbjct: 644 KGRTVDFKNTLLILTSNIGSKVIEKGGGGIGFEFAEDASESQYNRIKSLVNEELKQYFRP 703
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQLN+ ++M I DIMLKE++ RL K ++L V+ FK++L++EGYNPS
Sbjct: 704 EFLNRLDEIIVFRQLNREEVMLIADIMLKEVFGRLTEKGIKLEVSDRFKERLLQEGYNPS 763
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRN 279
YGARPLRRAI RLLED+LAE IL+G I GD+ +D D GGN++++ +
Sbjct: 764 YGARPLRRAIMRLLEDSLAEEILSGRIGEGDTAIVDVDEGGNILVHSQKT 813
>gi|124022698|ref|YP_001017005.1| protein ClpC [Prochlorococcus marinus str. MIT 9303]
gi|123962984|gb|ABM77740.1| ClpC [Prochlorococcus marinus str. MIT 9303]
Length = 859
Score = 365 bits (937), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 176/291 (60%), Positives = 229/291 (78%), Gaps = 18/291 (6%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 557 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALATYFFGSEEAMIRLDMSEFMERHT 616
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGF GGQLTEAVR RP++V+LFDEIEKAH DV N++LQLL+DGR+TD
Sbjct: 617 VSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRLTDS 676
Query: 122 KGQTVDLKNTIIIMTSNIGDSVI---------------ARESILGSDQMERGVAEELRRR 166
KG+TVD KNT+IIMTSNIG VI A ES ++++ V EEL++
Sbjct: 677 KGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGENAEES--QYNRIKSLVNEELKQY 734
Query: 167 FRPEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGY 226
FRPEFLNR+DE+IVFRQL++ ++ EI +IMLKE++ R++ K + LTV+ FK++L+EEGY
Sbjct: 735 FRPEFLNRLDEIIVFRQLSRDEVKEIAEIMLKEVFSRMQDKGITLTVSDAFKERLVEEGY 794
Query: 227 NPSYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRH 277
NPSYGARPLRRA+ RL+ED+LAE +LTG I+ GD+ MD D +++ RH
Sbjct: 795 NPSYGARPLRRAVMRLMEDSLAEEVLTGRIKDGDAAEMDVDDNKQIVV-RH 844
>gi|297819504|ref|XP_002877635.1| AtClpC [Arabidopsis lyrata subsp. lyrata]
gi|297323473|gb|EFH53894.1| AtClpC [Arabidopsis lyrata subsp. lyrata]
Length = 953
Score = 365 bits (936), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 174/290 (60%), Positives = 231/290 (79%), Gaps = 12/290 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGK+ELA ALA YFGS+EAM+R+DMSE+ME+HT
Sbjct: 644 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHT 703
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++++LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 704 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDS 763
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + E ++++ V EEL++ FRP
Sbjct: 764 KGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDHDEKDSSYNRIKSLVTEELKQYFRP 823
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K+++ EI DIMLKE+ RLE K +EL VT FK+++++EG++PS
Sbjct: 824 EFLNRLDEMIVFRQLTKLEVKEIADIMLKEVVARLEDKEIELQVTERFKERVVDEGFDPS 883
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRN 279
YGARPLRRAI RLLED++AE +L+ I+ GDSV +D D+ G+V++ N
Sbjct: 884 YGARPLRRAIMRLLEDSMAEKMLSRDIKEGDSVIVDVDAEGSVVVLSGNN 933
>gi|318040228|ref|ZP_07972184.1| ATPase [Synechococcus sp. CB0101]
Length = 853
Score = 365 bits (936), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 175/298 (58%), Positives = 226/298 (75%), Gaps = 13/298 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL +LA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 552 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKSLAAYFFGSEEAMIRLDMSEFMERHT 611
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGF GGQLTEAVR RP++V+LFDEIEKAH DV N++LQLL+DGR+TD
Sbjct: 612 VSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRLTDS 671
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARE------SILGSDQMERG-------VAEELRRRFR 168
KG+TVD KNT+IIMTSNIG VI + G+D E V EEL++ FR
Sbjct: 672 KGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGADAEETNYNRIRSLVNEELKQYFR 731
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNR+DE+IVFRQL++ ++ EI +IMLKE++ R+ K + L+VT FK++L+EEGYNP
Sbjct: 732 PEFLNRLDEIIVFRQLSRDEVKEIAEIMLKEVFSRMSEKGIHLSVTEAFKERLVEEGYNP 791
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMTVCA 286
SYGARPLRRA+ RLLED+LAE L+G I GDS +D D V++ + ++ A
Sbjct: 792 SYGARPLRRAVMRLLEDSLAEEFLSGRIGEGDSAVVDVDDNKQVVIRKQGEAAIPALA 849
>gi|352093666|ref|ZP_08954837.1| ATPase AAA-2 domain protein [Synechococcus sp. WH 8016]
gi|351680006|gb|EHA63138.1| ATPase AAA-2 domain protein [Synechococcus sp. WH 8016]
Length = 860
Score = 364 bits (935), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 178/299 (59%), Positives = 230/299 (76%), Gaps = 14/299 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 557 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEFMERHT 616
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGF GGQLTEAVR RP++V+LFDEIEKAH DV N++LQLL+DGR+TD
Sbjct: 617 VSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRLTDS 676
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARE------SILGSDQMERG-------VAEELRRRFR 168
KG+TVD KNT+IIMTSNIG VI + G + E V EEL++ FR
Sbjct: 677 KGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGENAEENQYNRIKSLVNEELKQYFR 736
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNR+DE+IVFRQLN+ ++ +I +IMLKE++ R+ K + LTV++ FK++L+EEGYNP
Sbjct: 737 PEFLNRLDEIIVFRQLNREEVKDIAEIMLKEVFARIGDKGITLTVSNAFKERLVEEGYNP 796
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMTVCAR 287
+YGARPLRRA+ RLLED+LAE +LTG I+ GDS +D D V++ RH N + V +
Sbjct: 797 AYGARPLRRAVMRLLEDSLAEEVLTGRIKEGDSAEVDIDHDKKVVV-RHLNTTTPVTPQ 854
>gi|33863332|ref|NP_894892.1| protein ClpC [Prochlorococcus marinus str. MIT 9313]
gi|33640781|emb|CAE21236.1| ClpC [Prochlorococcus marinus str. MIT 9313]
Length = 859
Score = 364 bits (934), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 174/289 (60%), Positives = 230/289 (79%), Gaps = 14/289 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 557 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALATYFFGSEEAMIRLDMSEFMERHT 616
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGF GGQLTEAVR RP++V+LFDEIEKAH DV N++LQLL+DGR+TD
Sbjct: 617 VSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRLTDS 676
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-----------ESILGS--DQMERGVAEELRRRFR 168
KG+TVD KNT+IIMTSNIG VI + E+ S ++++ V EEL++ FR
Sbjct: 677 KGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGENAEDSQYNRIKSLVNEELKQYFR 736
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNR+DE+IVFRQL++ ++ EI +IML+E++ R++ K + LTV+ FK++L+EEGYNP
Sbjct: 737 PEFLNRLDEIIVFRQLSRNEVKEIAEIMLQEVFSRMQDKGITLTVSDAFKERLVEEGYNP 796
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRH 277
SYGARPLRRA+ RL+ED+LAE +LTG I+ GD+ MD D +++ RH
Sbjct: 797 SYGARPLRRAVMRLMEDSLAEEVLTGRIKDGDAAEMDVDDNKQIVV-RH 844
>gi|428210348|ref|YP_007094701.1| ATPase [Chroococcidiopsis thermalis PCC 7203]
gi|428012269|gb|AFY90832.1| ATPase AAA-2 domain protein [Chroococcidiopsis thermalis PCC 7203]
Length = 824
Score = 363 bits (933), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 177/284 (62%), Positives = 220/284 (77%), Gaps = 13/284 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL +LA +FGS++AM+R+DMSEYME+HT
Sbjct: 525 AIRRARVGLKNPNRPIASFVFSGPTGVGKTELTKSLAAYFFGSEDAMIRLDMSEYMERHT 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 585 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARE------SILGSDQMERG-------VAEELRRRFR 168
KG+TVD KNT+II+TSNIG VI + D E V EEL++ FR
Sbjct: 645 KGRTVDFKNTLIILTSNIGSKVIEKGGGGIGFEFSSEDAAETQYNRIRSLVNEELKQYFR 704
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNR+DE+IVFRQL+K ++ EI DIMLKE++ RL K + LTVT FK +L+EEGYNP
Sbjct: 705 PEFLNRLDEIIVFRQLSKAEVKEIADIMLKEVFGRLTEKGITLTVTERFKDRLVEEGYNP 764
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
SYGARPLRRAI RLLED+LAE IL+G I+ GD +D D GNV
Sbjct: 765 SYGARPLRRAIMRLLEDSLAEEILSGRIKEGDEAVVDVDDTGNV 808
>gi|17230491|ref|NP_487039.1| endopeptidase Clp ATP-binding chain [Nostoc sp. PCC 7120]
gi|17132093|dbj|BAB74698.1| endopeptidase Clp ATP-binding chain [Nostoc sp. PCC 7120]
Length = 839
Score = 363 bits (932), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 177/283 (62%), Positives = 222/283 (78%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTELA +LA +FGS+EAM+R+DMSEYME+HT
Sbjct: 540 AIRRARVGLKNPNRPIASFVFSGPTGVGKTELAKSLASYFFGSEEAMIRLDMSEYMERHT 599
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 600 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 659
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARES-----ILGSDQMERG-------VAEELRRRFRP 169
KG+TVD KNT++I+TSNIG VI + DQ E V EEL++ FRP
Sbjct: 660 KGRTVDFKNTLLILTSNIGSKVIEKGGGGIGFEFSEDQTETQYNRIRSLVNEELKQYFRP 719
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL+K+++ EI DIMLKE++ RL K + L V+ FK +LIEEGY+PS
Sbjct: 720 EFLNRLDEIIVFRQLSKLEVTEIADIMLKEVFGRLTEKGITLEVSDRFKGRLIEEGYSPS 779
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED+LAE IL+G I+ GD +D D GNV
Sbjct: 780 YGARPLRRAIMRLLEDSLAEEILSGRIKDGDVALIDIDENGNV 822
>gi|428203900|ref|YP_007082489.1| chaperone ATPase [Pleurocapsa sp. PCC 7327]
gi|427981332|gb|AFY78932.1| ATPase with chaperone activity, ATP-binding subunit [Pleurocapsa
sp. PCC 7327]
Length = 821
Score = 363 bits (931), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 178/283 (62%), Positives = 221/283 (78%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAM+R+DMSEYME+HT
Sbjct: 523 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEYMERHT 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 583 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESI-LG----SDQMERG-------VAEELRRRFRP 169
KG+TVD KNT++IMTSNIG VI + LG DQ E V EEL++ FRP
Sbjct: 643 KGRTVDFKNTLLIMTSNIGSKVIEKGGDRLGFEFEVDQAEAQYNRIRSLVNEELKQYFRP 702
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNRIDE+IVFRQL K ++ +I DI+LK+++ RL +N+ L VT FK++L+EEGYNP+
Sbjct: 703 EFLNRIDEIIVFRQLTKEEVKQIADILLKQVFARLTEQNINLEVTEKFKERLVEEGYNPA 762
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED LAE IL+G IQ GD+ D D G V
Sbjct: 763 YGARPLRRAIMRLLEDVLAEEILSGRIQEGDTAVADIDEEGKV 805
>gi|427706010|ref|YP_007048387.1| ATPase [Nostoc sp. PCC 7107]
gi|427358515|gb|AFY41237.1| ATPase AAA-2 domain protein [Nostoc sp. PCC 7107]
Length = 823
Score = 362 bits (930), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 175/283 (61%), Positives = 223/283 (78%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTELA +LA +FGS+EAM+R+DMSEYME+HT
Sbjct: 524 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELAKSLASYFFGSEEAMIRLDMSEYMERHT 583
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 584 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 643
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-ESILGSDQMERG-----------VAEELRRRFRP 169
KG+TVD KNT++I+TSNIG VI + S +G + E V EEL++ FRP
Sbjct: 644 KGRTVDFKNTLLILTSNIGSKVIEKGASTIGFEFTEDAGESQYNRIKTLVNEELKQYFRP 703
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQLN+ ++ +I DIMLKE++ RL K + L VT FK +LI+EGY+PS
Sbjct: 704 EFLNRLDEIIVFRQLNREEVTQIADIMLKEVFGRLTEKGITLEVTERFKDRLIQEGYSPS 763
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED+LAE IL+G I+ GD+ +D D G V
Sbjct: 764 YGARPLRRAIMRLLEDSLAEEILSGRIKDGDTAVVDVDENGTV 806
>gi|113955104|ref|YP_730239.1| Clp protease ATP-binding subunit ClpC [Synechococcus sp. CC9311]
gi|113882455|gb|ABI47413.1| putative Clp protease, ATP-binding subunit ClpC [Synechococcus sp.
CC9311]
Length = 860
Score = 362 bits (930), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 177/299 (59%), Positives = 229/299 (76%), Gaps = 14/299 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 557 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEFMERHT 616
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGF GGQLTEAVR RP++V+LFDEIEKAH DV N++LQLL+DGR+TD
Sbjct: 617 VSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRLTDS 676
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARE------SILGSDQMERG-------VAEELRRRFR 168
KG+TVD KNT+IIMTSNIG VI + G + E V EEL++ FR
Sbjct: 677 KGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGENAEENQYNRIKSLVNEELKQYFR 736
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNR+DE+IVFRQLN+ ++ +I +IMLKE++ R+ K + LTV++ FK++L+EEGYNP
Sbjct: 737 PEFLNRLDEIIVFRQLNREEVKDIAEIMLKEVFARIGDKGITLTVSNAFKERLVEEGYNP 796
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMTVCAR 287
+YGARPLRRA+ RLLED+LAE +LTG I+ GDS +D D V++ RH + V +
Sbjct: 797 AYGARPLRRAVMRLLEDSLAEEVLTGRIKEGDSAEVDIDDDKKVVV-RHLKTATPVTPQ 854
>gi|75907133|ref|YP_321429.1| UvrB/UvrC protein [Anabaena variabilis ATCC 29413]
gi|75700858|gb|ABA20534.1| UvrB/UvrC protein [Anabaena variabilis ATCC 29413]
Length = 823
Score = 362 bits (929), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 177/283 (62%), Positives = 221/283 (78%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTELA +LA +FGS+EAM+R+DMSEYME+HT
Sbjct: 524 AIRRARVGLKNPNRPIASFVFSGPTGVGKTELAKSLASYFFGSEEAMIRLDMSEYMERHT 583
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 584 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 643
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARES-----ILGSDQMERG-------VAEELRRRFRP 169
KG+TVD KNT++I+TSNIG VI + DQ E V EEL++ FRP
Sbjct: 644 KGRTVDFKNTLLILTSNIGSKVIEKGGGGIGFEFSEDQTETQYNRIRSLVNEELKQYFRP 703
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL+K ++ EI DIMLKE++ RL K + L V+ FK +LIEEGY+PS
Sbjct: 704 EFLNRLDEIIVFRQLSKAEVTEIADIMLKEVFGRLTEKGITLEVSDRFKGRLIEEGYSPS 763
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED+LAE IL+G I+ GD +D D GNV
Sbjct: 764 YGARPLRRAIMRLLEDSLAEEILSGRIKDGDVALIDIDDNGNV 806
>gi|78184962|ref|YP_377397.1| ATPase [Synechococcus sp. CC9902]
gi|78169256|gb|ABB26353.1| ATPase [Synechococcus sp. CC9902]
Length = 843
Score = 362 bits (929), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 176/290 (60%), Positives = 227/290 (78%), Gaps = 14/290 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 541 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALATYFFGSEEAMIRLDMSEFMERHT 600
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGF GGQLTEAVR RP++V+LFDEIEKAH DV N++LQLL+DGR+TD
Sbjct: 601 VSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRLTDS 660
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-----------ESILGSD--QMERGVAEELRRRFR 168
KG+TVD KNT++IMTSNIG VI + ES S ++ V EEL++ FR
Sbjct: 661 KGRTVDFKNTLVIMTSNIGSKVIEKGGGGLGFEFSGESAEDSQYTRIRSLVNEELKQYFR 720
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNR+DE+IVFRQLN+ ++ EI +IMLKE++ R+ K + LTV+ FK++L+EEGYNP
Sbjct: 721 PEFLNRLDEIIVFRQLNREEVKEIAEIMLKEVFGRMGEKGITLTVSDAFKERLVEEGYNP 780
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHR 278
+YGARPLRRA+ RLLED+LAE +LTG I+ GD +D D V++ RH+
Sbjct: 781 AYGARPLRRAVMRLLEDSLAEEVLTGRIKDGDHAEVDVDENKKVVV-RHK 829
>gi|78779482|ref|YP_397594.1| Clp protease ATP-binding subunit [Prochlorococcus marinus str. MIT
9312]
gi|78712981|gb|ABB50158.1| ATPase [Prochlorococcus marinus str. MIT 9312]
Length = 842
Score = 362 bits (929), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 172/286 (60%), Positives = 228/286 (79%), Gaps = 13/286 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL +LA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 541 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKSLASYFFGSEEAMIRLDMSEFMERHT 600
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGF GGQLTEAVR RP++V+LFDE+EKAH DV N++LQLL+DGR+TD
Sbjct: 601 VSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEVEKAHPDVFNLLLQLLEDGRLTDS 660
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-----------ESILGS--DQMERGVAEELRRRFR 168
KG+TVD KNT++IMTSNIG VI + +S+ S ++++ V EEL++ FR
Sbjct: 661 KGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFSGDSVEDSQYNRIKSLVNEELKQYFR 720
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNR+DE+IVFRQL+K ++ EI +IML+E++ RLE K ++L+VT FK++L+EEGYNP
Sbjct: 721 PEFLNRLDEIIVFRQLSKNEVKEIAEIMLQEVFARLEDKGIKLSVTDAFKERLVEEGYNP 780
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
SYGARPLRRA+ RLLED+LAE +L+G I+ GD +D D V +
Sbjct: 781 SYGARPLRRAVMRLLEDSLAEEVLSGRIKDGDKALVDIDDNKKVTI 826
>gi|452821448|gb|EME28478.1| [pt] ATP-dependent Clp protease ATP-binding subunit ClpB [Galdieria
sulphuraria]
Length = 847
Score = 362 bits (929), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 174/290 (60%), Positives = 221/290 (76%), Gaps = 12/290 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+ AMVR+DMSEYME+HT
Sbjct: 526 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALASYFFGSESAMVRLDMSEYMERHT 585
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTE VR +P++VILFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 586 VSKLIGSPPGYVGYNEGGQLTEVVRRKPYTVILFDEIEKAHPDVFNILLQILEDGRLTDA 645
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESI-----LGSDQMERG-------VAEELRRRFRP 169
KG TVD KNT++IMTSNIG VI + L + QME V EEL++ FRP
Sbjct: 646 KGHTVDFKNTLLIMTSNIGSKVIDKGGSNLGFELSASQMESHYNRIRSLVNEELKQYFRP 705
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EF+NR+DE+IVFRQL K ++ EI ++MLKE+++RLE KN+++ VT FK +LIEEGYNP
Sbjct: 706 EFINRLDEIIVFRQLTKNEVGEIANLMLKEVFDRLEKKNIKIEVTDRFKGRLIEEGYNPV 765
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRN 279
YGARPLRRA+ RLLED LAE IL+ +Q D+ +D D VI+ +N
Sbjct: 766 YGARPLRRAVMRLLEDKLAEEILSQRLQASDTAVVDLDENNQVIILTSKN 815
>gi|87124752|ref|ZP_01080600.1| endopeptidase Clp ATP-binding chain C [Synechococcus sp. RS9917]
gi|86167631|gb|EAQ68890.1| endopeptidase Clp ATP-binding chain C [Synechococcus sp. RS9917]
Length = 860
Score = 362 bits (928), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 175/293 (59%), Positives = 227/293 (77%), Gaps = 14/293 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 556 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALATYFFGSEEAMIRLDMSEFMERHT 615
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGF GGQLTEAVR RP++V+LFDEIEKAH DV N++LQLL+DGR+TD
Sbjct: 616 VSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRLTDS 675
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARE------SILGSDQMERG-------VAEELRRRFR 168
KG+TVD KNT++IMTSNIG VI + G + E V EEL++ FR
Sbjct: 676 KGRTVDFKNTLVIMTSNIGSKVIEKGGGGLGFEFSGENAEENQYNRIRSLVNEELKQYFR 735
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNR+DE+IVFRQLN+ ++ EI +IML+E++ R+ K + LTV+ FK++L+EEGYNP
Sbjct: 736 PEFLNRLDEIIVFRQLNREEVKEIAEIMLREVFSRIGEKGITLTVSDAFKERLVEEGYNP 795
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGS 281
+YGARPLRRA+ RLLED+LAE +L+G I+ GD+V +D D V++ RH S
Sbjct: 796 AYGARPLRRAVMRLLEDSLAEEVLSGRIKDGDAVEVDVDENKQVVV-RHGTNS 847
>gi|434393419|ref|YP_007128366.1| ATPase AAA-2 domain protein [Gloeocapsa sp. PCC 7428]
gi|428265260|gb|AFZ31206.1| ATPase AAA-2 domain protein [Gloeocapsa sp. PCC 7428]
Length = 825
Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 173/283 (61%), Positives = 223/283 (78%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAM+R+DMSEYME+HT
Sbjct: 526 AIRRARVGLKNPNRPIASFVFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEYMERHT 585
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 586 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 645
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++I+TSNIG VI + ++ +++ V EEL++ FRP
Sbjct: 646 KGRTVDFKNTLLILTSNIGSKVIEKGGGGLGFEFAENQAEAQYNRIRSLVNEELKQYFRP 705
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K ++ +I DI+LKE++ RL K + L VT FK++L+EEGYNPS
Sbjct: 706 EFLNRLDEIIVFRQLTKDEVKQISDILLKEVFVRLTEKGITLEVTDRFKERLVEEGYNPS 765
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED+LAE IL+G I+ GD+ +D D GNV
Sbjct: 766 YGARPLRRAIMRLLEDSLAEEILSGRIKDGDTAVVDVDDTGNV 808
>gi|428313889|ref|YP_007124866.1| chaperone ATPase [Microcoleus sp. PCC 7113]
gi|428255501|gb|AFZ21460.1| ATPase with chaperone activity, ATP-binding subunit [Microcoleus
sp. PCC 7113]
Length = 822
Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 174/283 (61%), Positives = 222/283 (78%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTELA +LA +FGS+EAM+R+DMSEYME+HT
Sbjct: 524 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELAKSLASYFFGSEEAMIRLDMSEYMERHT 583
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 584 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 643
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSNIG VI + ++ +++ V EEL++ FRP
Sbjct: 644 KGRTVDFKNTLLIMTSNIGSKVIEKGGGGIGFEFSENQAESQYNRIRSLVNEELKQYFRP 703
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQLN+ ++ EI DIMLKE++ RL + + L VT FK +L+EEGYNP+
Sbjct: 704 EFLNRLDEIIVFRQLNRDEVKEIADIMLKEVFGRLNEQGITLEVTERFKDRLVEEGYNPA 763
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED LAE IL G+I+ GD T+D D G V
Sbjct: 764 YGARPLRRAIMRLLEDVLAEQILGGHIKDGDIATVDVDDSGTV 806
>gi|428301853|ref|YP_007140159.1| ATPase [Calothrix sp. PCC 6303]
gi|428238397|gb|AFZ04187.1| ATPase AAA-2 domain protein [Calothrix sp. PCC 6303]
Length = 823
Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 175/285 (61%), Positives = 222/285 (77%), Gaps = 12/285 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTELA +LA +FGS+EAM+R+DMSEYME+HT
Sbjct: 524 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELAKSLASYFFGSEEAMIRLDMSEYMERHT 583
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 584 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 643
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARES-----ILGSDQMERG-------VAEELRRRFRP 169
KG+TVD KNT++I+TSNIG VI + DQ + V EEL+ FRP
Sbjct: 644 KGRTVDFKNTLLILTSNIGSKVIEKGGGGIGFEFAEDQTDSQYNRIKFLVNEELKNYFRP 703
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQLNK ++ EI DIMLKE++ RL K + L V+ +FK +LI+EGY+PS
Sbjct: 704 EFLNRLDEIIVFRQLNKAEVTEIADIMLKEVFGRLTEKGITLEVSDSFKDRLIQEGYSPS 763
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
YGARPLRRAI RLLED+LAE IL+G ++ GD +D D G VI+
Sbjct: 764 YGARPLRRAIMRLLEDSLAEEILSGRVKDGDIAVVDIDENGAVIV 808
>gi|116072469|ref|ZP_01469736.1| ATPase [Synechococcus sp. BL107]
gi|116064991|gb|EAU70750.1| ATPase [Synechococcus sp. BL107]
Length = 843
Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 176/289 (60%), Positives = 226/289 (78%), Gaps = 14/289 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 541 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALATYFFGSEEAMIRLDMSEFMERHT 600
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGF GGQLTEAVR RP++V+LFDEIEKAH DV N++LQLL+DGR+TD
Sbjct: 601 VSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRLTDS 660
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-----------ESILGSD--QMERGVAEELRRRFR 168
KG+TVD KNT++IMTSNIG VI + ES S ++ V EEL++ FR
Sbjct: 661 KGRTVDFKNTLVIMTSNIGSKVIEKGGGGLGFEFSGESAEDSQYTRIRSLVNEELKQYFR 720
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNR+DE+IVFRQLN+ ++ EI +IMLKE++ R+ K + LTV+ FK++L+EEGYNP
Sbjct: 721 PEFLNRLDEIIVFRQLNREEVKEIAEIMLKEVFGRMGEKGITLTVSDAFKERLVEEGYNP 780
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRH 277
+YGARPLRRA+ RLLED+LAE +LTG I+ GD +D D V++ RH
Sbjct: 781 AYGARPLRRAVMRLLEDSLAEEVLTGRIKDGDHAEVDVDENKKVVV-RH 828
>gi|260435541|ref|ZP_05789511.1| chaperone protein ClpB 1 [Synechococcus sp. WH 8109]
gi|260413415|gb|EEX06711.1| chaperone protein ClpB 1 [Synechococcus sp. WH 8109]
Length = 846
Score = 361 bits (926), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 176/290 (60%), Positives = 227/290 (78%), Gaps = 14/290 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 544 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALATYFFGSEEAMIRLDMSEFMERHT 603
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGF GGQLTEAVR RP++V+LFDEIEKAH DV N++LQLL+DGR+TD
Sbjct: 604 VSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRLTDS 663
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-----------ESILGSD--QMERGVAEELRRRFR 168
KG+TVD KNT+IIMTSNIG VI + ES S ++ V EEL++ FR
Sbjct: 664 KGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGESAEESQYTRIRSLVNEELKQYFR 723
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNR+DE+IVFRQLN+ ++ EI +IMLKE++ R+ K + LTV+ FK++L+EEGYNP
Sbjct: 724 PEFLNRLDEIIVFRQLNRDEVKEIAEIMLKEVFGRMGEKGITLTVSDAFKERLVEEGYNP 783
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHR 278
+YGARPLRRA+ RLLED+LAE +L+G I+ GD +D D V++ RH+
Sbjct: 784 AYGARPLRRAVMRLLEDSLAEEVLSGRIKDGDHAEVDVDENKKVVV-RHK 832
>gi|427714632|ref|YP_007063256.1| chaperone ATPase [Synechococcus sp. PCC 6312]
gi|427378761|gb|AFY62713.1| ATPase with chaperone activity, ATP-binding subunit [Synechococcus
sp. PCC 6312]
Length = 824
Score = 360 bits (925), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 174/284 (61%), Positives = 223/284 (78%), Gaps = 13/284 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 525 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEFMERHT 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 585 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQILEDGRLTDS 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARES-----ILGSD--------QMERGVAEELRRRFR 168
KG+TVD KNT++IMTSNIG VI + + SD ++ V EEL++ FR
Sbjct: 645 KGRTVDFKNTLLIMTSNIGSKVIEKGAGGLGFEFASDNPAESQYNRIRSLVNEELKQYFR 704
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNR+DE+IVFRQL K ++ EI DI+LKE++ RL +N+ LTVT FK++LI+EGYNP
Sbjct: 705 PEFLNRLDEIIVFRQLTKDEVKEIADILLKEVFTRLTERNITLTVTDRFKERLIDEGYNP 764
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
SYGARPLRRAI RLLED+LAE +LTG ++ G + +D D G V
Sbjct: 765 SYGARPLRRAIMRLLEDSLAEELLTGRMKEGATAVVDVDESGQV 808
>gi|254431180|ref|ZP_05044883.1| ATPase, AAA family [Cyanobium sp. PCC 7001]
gi|197625633|gb|EDY38192.1| ATPase, AAA family [Cyanobium sp. PCC 7001]
Length = 843
Score = 360 bits (925), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 174/289 (60%), Positives = 223/289 (77%), Gaps = 13/289 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL +LA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 541 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKSLAAYFFGSEEAMIRLDMSEFMERHT 600
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGF GGQLTEAVR RP++V+LFDEIEKAH DV N++LQLL+DGR+TD
Sbjct: 601 VSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRLTDS 660
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARE------SILGSDQMERG-------VAEELRRRFR 168
KG+TVD KNT+IIMTSNIG VI + GSD E V EEL++ FR
Sbjct: 661 KGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGSDAEETQYNRIRSLVNEELKQYFR 720
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNR+DE+IVFRQL + ++ EI +IMLKE++ R++ K + L+VT FK++L+EEGYNP
Sbjct: 721 PEFLNRLDEIIVFRQLTRDEVKEIAEIMLKEVFGRMDEKGIHLSVTEAFKERLVEEGYNP 780
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRH 277
SYGARPLRRA+ RLLED+LAE L+G I GDS +D + V++ +
Sbjct: 781 SYGARPLRRAVMRLLEDSLAEEFLSGRIGEGDSAVVDVNDDKQVVILKQ 829
>gi|307154665|ref|YP_003890049.1| ATPase AAA-2 domain-containing protein [Cyanothece sp. PCC 7822]
gi|306984893|gb|ADN16774.1| ATPase AAA-2 domain protein [Cyanothece sp. PCC 7822]
Length = 821
Score = 360 bits (925), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 173/283 (61%), Positives = 220/283 (77%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS++AM+R+DMSE+ME+HT
Sbjct: 523 AIRRARVGLKNPNRPIASFVFSGPTGVGKTELTKALAAYFFGSEDAMIRLDMSEFMERHT 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 583 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNILLQILEDGRLTDA 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESI-----LGSDQMERG-------VAEELRRRFRP 169
KG+TVD KNT++IMTSNIG VI + +DQ E V EEL++ FRP
Sbjct: 643 KGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFEADQAEAQYNRIRSLVNEELKQYFRP 702
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL++ ++ EI DI+LKE++ RL K + L VT FK +L+EEGYNP+
Sbjct: 703 EFLNRLDEIIVFRQLSRDEVKEIADILLKEVFSRLTEKGITLEVTQKFKDRLVEEGYNPA 762
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED LAE IL+G ++ GD+ D DS G V
Sbjct: 763 YGARPLRRAIMRLLEDVLAEEILSGQVKDGDTAIADIDSEGKV 805
>gi|443323335|ref|ZP_21052342.1| ATPase with chaperone activity, ATP-binding subunit [Gloeocapsa sp.
PCC 73106]
gi|442786899|gb|ELR96625.1| ATPase with chaperone activity, ATP-binding subunit [Gloeocapsa sp.
PCC 73106]
Length = 820
Score = 360 bits (925), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 172/289 (59%), Positives = 223/289 (77%), Gaps = 12/289 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+++M+R+DMSEYME+HT
Sbjct: 523 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEDSMIRLDMSEYMERHT 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 583 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARES-----ILGSDQMERG-------VAEELRRRFRP 169
KG+TVD KNT++IMTSNIG VI + D+ E V EEL+ FRP
Sbjct: 643 KGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFAEDKTESQYNRIRSLVNEELKNYFRP 702
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQLNK ++ EI +I+LK+++ RL KN+ L VT+ FK++L+EEGYNP+
Sbjct: 703 EFLNRLDEIIVFRQLNKEEVTEIAEILLKDVFSRLTDKNITLEVTNKFKERLVEEGYNPA 762
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHR 278
YGARPLRRAI RLLED LAE IL+G I GD +D + G V++ + +
Sbjct: 763 YGARPLRRAIMRLLEDALAEEILSGKISEGDKAIVDTNDEGKVVIIKEK 811
>gi|149275671|gb|ABR23161.1| ATP-dependent Clp protease regulatory subunit ClpC [Ulva fasciata]
Length = 904
Score = 360 bits (925), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 176/297 (59%), Positives = 225/297 (75%), Gaps = 16/297 (5%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGK+ELA LA YFGS+EAMVR+DMSEYME+HT
Sbjct: 600 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKTLATYYFGSEEAMVRLDMSEYMERHT 659
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V+K GSPPGYVG+ GGQLTEAVR RP++V+LFDE+EKAH DV N+MLQ+L+DGR+TD
Sbjct: 660 VAKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEVEKAHPDVFNMMLQILEDGRLTDS 719
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARES-----ILGSDQMERG--------VAEELRRRFR 168
KG+TVD KNT+IIMTSN+G +VI + L SD E V EEL++ FR
Sbjct: 720 KGRTVDFKNTLIIMTSNVGSTVIEKGGGGLGFQLDSDNEEENSYNRIKNLVMEELKQYFR 779
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNR+DE+IVFRQL K ++ +I DIMLK + ER + K + + +T FK +L++EG+NP
Sbjct: 780 PEFLNRLDEIIVFRQLTKAEVKQIADIMLKGVLERAKEKEITIDLTERFKDRLVDEGFNP 839
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMTVC 285
+YGARPLRRAI RLLED LAE +L G IQ GD + MD D+ GN+ + NG T+
Sbjct: 840 AYGARPLRRAIQRLLEDALAERMLGGDIQEGDKIIMDVDAEGNITVL---NGDKTLV 893
>gi|148239871|ref|YP_001225258.1| ATP-dependent Clp protease ATP-binding subunit clpA-like protein
[Synechococcus sp. WH 7803]
gi|147848410|emb|CAK23961.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Synechococcus sp. WH 7803]
Length = 844
Score = 360 bits (924), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 174/295 (58%), Positives = 227/295 (76%), Gaps = 13/295 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 542 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEFMERHT 601
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGF GGQLTEAVR RP++V+LFDEIEKAH DV N++LQLL+DGR+TD
Sbjct: 602 VSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRLTDS 661
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARE------SILGSDQMERG-------VAEELRRRFR 168
KG+TVD KNT+IIMTSNIG VI + G + E V EEL++ FR
Sbjct: 662 KGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGENAEENQYNRIRSLVNEELKQYFR 721
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNR+DE+IVFRQLN+ ++ EI +IML+E++ R+ K + LTV+ FK++L+EEGYNP
Sbjct: 722 PEFLNRLDEIIVFRQLNRDEVKEIAEIMLREVFGRIGEKGITLTVSDAFKERLVEEGYNP 781
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMT 283
+YGARPLRRA+ RLLED+LAE +L+G I+ GD +D + G V+ + +R + T
Sbjct: 782 AYGARPLRRAVMRLLEDSLAEEVLSGRIKDGDEAEVDVEDGKVVVKHLNRTATET 836
>gi|307104044|gb|EFN52300.1| hypothetical protein CHLNCDRAFT_32555 [Chlorella variabilis]
Length = 844
Score = 360 bits (924), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 169/283 (59%), Positives = 225/283 (79%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++P+RPI+SF+F+GPTGVGK+ELA LA YFGS+EAMVR+DMSE+ME+HT
Sbjct: 539 AIRRARVGLKNPSRPIASFIFSGPTGVGKSELAKTLASYYFGSEEAMVRLDMSEFMERHT 598
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 599 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 658
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT+II+TSN+G SVI + E ++++ V EEL++ FRP
Sbjct: 659 KGRTVDFKNTLIILTSNVGSSVIEKGGGGIGFQLDNSEEDSSYNRIKSLVNEELKQYFRP 718
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K ++ +I DIML+++++R E K +++ VT FK +L++EGYNP+
Sbjct: 719 EFLNRLDEIIVFRQLTKQEVKQIADIMLRQVFKRAEEKGIKIDVTERFKDRLVDEGYNPA 778
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED++AE +L G I+ GDSV +D D+ G +
Sbjct: 779 YGARPLRRAIMRLLEDSMAERMLAGDIKEGDSVIIDVDADGQI 821
>gi|411117307|ref|ZP_11389794.1| ATPase with chaperone activity, ATP-binding subunit
[Oscillatoriales cyanobacterium JSC-12]
gi|410713410|gb|EKQ70911.1| ATPase with chaperone activity, ATP-binding subunit
[Oscillatoriales cyanobacterium JSC-12]
Length = 822
Score = 360 bits (924), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 173/286 (60%), Positives = 220/286 (76%), Gaps = 13/286 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAM+R+DMSEYME+HT
Sbjct: 523 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALASYFFGSEEAMIRLDMSEYMERHT 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 583 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-------------ESILGSDQMERGVAEELRRRFR 168
KG+TVD KNT++IMTSNIG VI + E +++ V EEL++ FR
Sbjct: 643 KGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFDFTSENEEESQYNRIRSLVNEELKQYFR 702
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNR+DE+IVFRQL K ++ EI DIML E++ RL + + L VT FK +L+EEGYNP
Sbjct: 703 PEFLNRVDEIIVFRQLKKDEVKEIADIMLNEVFGRLREQGIVLEVTEKFKDRLVEEGYNP 762
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
SYGARPLRRAI RLLED+LAE IL+G + GD+ +D D G V++
Sbjct: 763 SYGARPLRRAIMRLLEDSLAEEILSGRVNDGDTAVVDVDESGQVVV 808
>gi|22297851|ref|NP_681098.1| ATP-dependent Clp protease regulatory subunit [Thermosynechococcus
elongatus BP-1]
gi|22294028|dbj|BAC07860.1| ATP-dependent Clp protease regulatory subunit [Thermosynechococcus
elongatus BP-1]
Length = 824
Score = 360 bits (924), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 173/284 (60%), Positives = 220/284 (77%), Gaps = 13/284 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAM+R+DMSEYME+HT
Sbjct: 525 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEYMERHT 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 585 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQILEDGRLTDS 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESI-----LGSDQMERG--------VAEELRRRFR 168
KG+TVD KNT++IMTSNIG VI + + G++ V EEL++ FR
Sbjct: 645 KGRTVDFKNTLLIMTSNIGSKVIEKGAAGLGFEFGTEDAAESQYNRIRSLVNEELKQYFR 704
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNR+DE+IVFRQL K ++ +I DI+LKE++ RL K + L VT FK++LI+EGYNP
Sbjct: 705 PEFLNRLDEIIVFRQLTKDEVKQIADILLKEVFSRLTEKGITLEVTERFKERLIDEGYNP 764
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
SYGARPLRRAI RLLED LAE +L+G I+ GD+ +D D G V
Sbjct: 765 SYGARPLRRAIMRLLEDTLAEEMLSGRIREGDTALIDVDESGQV 808
>gi|422303962|ref|ZP_16391311.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9806]
gi|389791002|emb|CCI13172.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9806]
Length = 821
Score = 360 bits (923), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 171/283 (60%), Positives = 224/283 (79%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS++AM+R+DMSEYME+HT
Sbjct: 523 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEDAMIRLDMSEYMERHT 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 583 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSNIG VI + ++ +++ V EEL++ FRP
Sbjct: 643 KGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFADNQAEAQYNRIRSLVNEELKQYFRP 702
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQLNK ++ EI +I+LK++++RL +N+ L+VT FK++LIEEGYNP+
Sbjct: 703 EFLNRLDEIIVFRQLNKEEVKEIAEILLKDVFKRLTEQNITLSVTDKFKERLIEEGYNPA 762
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED LAE IL+G + GD+ +D D G V
Sbjct: 763 YGARPLRRAIMRLLEDVLAEEILSGRVSDGDTAMVDIDEEGKV 805
>gi|425438612|ref|ZP_18818956.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9717]
gi|425462269|ref|ZP_18841743.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9808]
gi|425470166|ref|ZP_18849036.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9701]
gi|440752077|ref|ZP_20931280.1| clp amino terminal domain protein [Microcystis aeruginosa TAIHU98]
gi|443661761|ref|ZP_21132789.1| clp amino terminal domain protein [Microcystis aeruginosa
DIANCHI905]
gi|159029700|emb|CAO87778.1| clpC [Microcystis aeruginosa PCC 7806]
gi|389720211|emb|CCH96065.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9717]
gi|389824679|emb|CCI26165.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9808]
gi|389884278|emb|CCI35401.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9701]
gi|440176570|gb|ELP55843.1| clp amino terminal domain protein [Microcystis aeruginosa TAIHU98]
gi|443332247|gb|ELS46866.1| clp amino terminal domain protein [Microcystis aeruginosa
DIANCHI905]
Length = 821
Score = 360 bits (923), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 171/283 (60%), Positives = 224/283 (79%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS++AM+R+DMSEYME+HT
Sbjct: 523 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEDAMIRLDMSEYMERHT 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 583 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSNIG VI + ++ +++ V EEL++ FRP
Sbjct: 643 KGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFADNQAEAQYNRIRSLVNEELKQYFRP 702
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQLNK ++ EI +I+LK++++RL +N+ L+VT FK++LIEEGYNP+
Sbjct: 703 EFLNRLDEIIVFRQLNKEEVKEIAEILLKDVFKRLTEQNITLSVTDKFKERLIEEGYNPA 762
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED LAE IL+G + GD+ +D D G V
Sbjct: 763 YGARPLRRAIMRLLEDVLAEEILSGRVSDGDTAMVDIDEEGKV 805
>gi|166368696|ref|YP_001660969.1| ATP-dependent Clp protease ATPase subunit [Microcystis aeruginosa
NIES-843]
gi|425465251|ref|ZP_18844561.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9809]
gi|166091069|dbj|BAG05777.1| ATP-dependent Clp protease ATPase subunit [Microcystis aeruginosa
NIES-843]
gi|389832560|emb|CCI23740.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9809]
Length = 821
Score = 360 bits (923), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 171/283 (60%), Positives = 224/283 (79%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS++AM+R+DMSEYME+HT
Sbjct: 523 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEDAMIRLDMSEYMERHT 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 583 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSNIG VI + ++ +++ V EEL++ FRP
Sbjct: 643 KGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFADNQAEAQYNRIRSLVNEELKQYFRP 702
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQLNK ++ EI +I+LK++++RL +N+ L+VT FK++LIEEGYNP+
Sbjct: 703 EFLNRLDEIIVFRQLNKEEVKEIAEILLKDVFKRLTEQNITLSVTDKFKERLIEEGYNPA 762
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED LAE IL+G + GD+ +D D G V
Sbjct: 763 YGARPLRRAIMRLLEDVLAEEILSGRVSDGDTAMVDIDEEGKV 805
>gi|427727388|ref|YP_007073625.1| chaperone ATPase [Nostoc sp. PCC 7524]
gi|427363307|gb|AFY46028.1| ATPase with chaperone activity, ATP-binding subunit [Nostoc sp. PCC
7524]
Length = 856
Score = 360 bits (923), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 176/283 (62%), Positives = 221/283 (78%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTELA +LA +FGS+EAM+R+DMSEYME+HT
Sbjct: 557 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELAKSLASYFFGSEEAMIRLDMSEYMERHT 616
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 617 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 676
Query: 122 KGQTVDLKNTIIIMTSNIGDSV-----IARESILGSDQMERG-------VAEELRRRFRP 169
KG+TVD KNT++I+TSNIG V G DQ E V EEL++ FRP
Sbjct: 677 KGRTVDFKNTLLILTSNIGSKVIEKGGGGIGFEFGEDQSESQYNRIKNLVNEELKQYFRP 736
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL+K+++ EI DIMLKE++ RL K + L V+ FK +LI+EGY+PS
Sbjct: 737 EFLNRLDEIIVFRQLSKLEVTEIADIMLKEVFGRLTEKGITLEVSDRFKDRLIQEGYSPS 796
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED+LAE IL+G I+ GD +D D GNV
Sbjct: 797 YGARPLRRAIMRLLEDSLAEEILSGRIKDGDVALVDVDENGNV 839
>gi|220910059|ref|YP_002485370.1| ATPase AAA [Cyanothece sp. PCC 7425]
gi|219866670|gb|ACL47009.1| ATPase AAA-2 domain protein [Cyanothece sp. PCC 7425]
Length = 825
Score = 360 bits (923), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 172/284 (60%), Positives = 222/284 (78%), Gaps = 13/284 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTELA ALA +FGS+EAM+R+DMSEYME+HT
Sbjct: 526 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELAKALAAYFFGSEEAMIRLDMSEYMERHT 585
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 586 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 645
Query: 122 KGQTVDLKNTIIIMTSNIGDSVI-------------ARESILGSDQMERGVAEELRRRFR 168
KG+TVD KNT++IMTSNIG VI A E+ +++ V EEL++ FR
Sbjct: 646 KGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFSGAGEADSQYNRIRSLVNEELKQYFR 705
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNR+DE+IVFRQL + ++ EI DI+LKE++ RL + + L VT FK +L++EGYNP
Sbjct: 706 PEFLNRLDEIIVFRQLTRDEVKEIADILLKEVFSRLTEQGITLEVTARFKDRLVDEGYNP 765
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
SYGARPLRRAI RLLED+LAE IL+G ++ GD+ +D D G +
Sbjct: 766 SYGARPLRRAIMRLLEDSLAEEILSGRVKEGDTAIVDVDGDGQI 809
>gi|157413559|ref|YP_001484425.1| ClpC [Prochlorococcus marinus str. MIT 9215]
gi|157388134|gb|ABV50839.1| ClpC [Prochlorococcus marinus str. MIT 9215]
Length = 842
Score = 360 bits (923), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 171/286 (59%), Positives = 227/286 (79%), Gaps = 13/286 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL +LA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 541 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKSLASYFFGSEEAMIRLDMSEFMERHT 600
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGF GGQLTEAVR RP++V+LFDE+EKAH DV N++LQLL+DGR+TD
Sbjct: 601 VSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEVEKAHPDVFNLLLQLLEDGRLTDS 660
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-----------ESILGS--DQMERGVAEELRRRFR 168
KG+TVD KNT++IMTSNIG VI + +S+ S ++++ V EEL++ FR
Sbjct: 661 KGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFSGDSVEDSQYNRIKSLVNEELKQYFR 720
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNR+DE+IVFRQL K ++ EI +IML+E++ RL+ K ++L VT FK++L+EEGYNP
Sbjct: 721 PEFLNRLDEIIVFRQLTKNEVKEIAEIMLQEVFARLQDKGIKLNVTDAFKERLVEEGYNP 780
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
SYGARPLRRA+ RLLED+LAE +L+G I+ GD+ +D D V +
Sbjct: 781 SYGARPLRRAVMRLLEDSLAEEVLSGRIKDGDNALVDIDDNKKVTI 826
>gi|425437952|ref|ZP_18818364.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9432]
gi|389676952|emb|CCH94083.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9432]
Length = 821
Score = 360 bits (923), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 171/283 (60%), Positives = 224/283 (79%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS++AM+R+DMSEYME+HT
Sbjct: 523 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEDAMIRLDMSEYMERHT 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 583 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSNIG VI + ++ +++ V EEL++ FRP
Sbjct: 643 KGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFADNQAEAQYNRIRSLVNEELKQYFRP 702
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQLNK ++ EI +I+LK++++RL +N+ L+VT FK++LIEEGYNP+
Sbjct: 703 EFLNRLDEIIVFRQLNKEEVKEIAEILLKDVFKRLTEQNITLSVTDKFKERLIEEGYNPA 762
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED LAE IL+G + GD+ +D D G V
Sbjct: 763 YGARPLRRAIMRLLEDVLAEEILSGRVSGGDTAMVDIDEEGKV 805
>gi|425443940|ref|ZP_18824003.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9443]
gi|425455767|ref|ZP_18835478.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9807]
gi|389732831|emb|CCI03294.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9443]
gi|389803296|emb|CCI17774.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9807]
Length = 821
Score = 360 bits (923), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 171/283 (60%), Positives = 224/283 (79%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS++AM+R+DMSEYME+HT
Sbjct: 523 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEDAMIRLDMSEYMERHT 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 583 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSNIG VI + ++ +++ V EEL++ FRP
Sbjct: 643 KGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFADNQAEAQYNRIRSLVNEELKQYFRP 702
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQLNK ++ EI +I+LK++++RL +N+ L+VT FK++LIEEGYNP+
Sbjct: 703 EFLNRLDEIIVFRQLNKEEVKEIAEILLKDVFKRLTEQNITLSVTDKFKERLIEEGYNPA 762
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED LAE IL+G + GD+ +D D G V
Sbjct: 763 YGARPLRRAIMRLLEDVLAEEILSGRVSDGDTAMVDIDEEGKV 805
>gi|51209900|ref|YP_063564.1| Clp protease ATP binding subunit [Gracilaria tenuistipitata var.
liui]
gi|50657654|gb|AAT79639.1| Clp protease ATP binding subunit [Gracilaria tenuistipitata var.
liui]
Length = 823
Score = 359 bits (922), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 172/283 (60%), Positives = 220/283 (77%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAMVR+DMSEYME+HT
Sbjct: 527 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALASYFFGSQEAMVRLDMSEYMERHT 586
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GG LTEAVR RP++VILFDEIEKAH D+ N++LQ+L+DGR+TD
Sbjct: 587 VSKLIGSPPGYVGYSEGGYLTEAVRKRPYTVILFDEIEKAHPDIFNLLLQILEDGRLTDA 646
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARES-----ILGSDQMERG-------VAEELRRRFRP 169
KG+T+D KNT++IMTSNIG VI + LG Q E V EEL++ FRP
Sbjct: 647 KGRTIDFKNTLLIMTSNIGSKVIEKGGGSLGFELGESQTESQYNRIRSLVNEELKQYFRP 706
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K ++ EI +IML+E++ R++ + +EL VT FK +L++EGYNPS
Sbjct: 707 EFLNRLDEIIVFRQLTKDEVREIAEIMLQEVFNRIKQQEIELEVTERFKNRLVDEGYNPS 766
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRA+ RLLED+LAE +L+G I+ GDS +D G V
Sbjct: 767 YGARPLRRAVMRLLEDSLAEEVLSGKIKAGDSAVVDVTDEGKV 809
>gi|254527057|ref|ZP_05139109.1| ATPase, AAA family [Prochlorococcus marinus str. MIT 9202]
gi|221538481|gb|EEE40934.1| ATPase, AAA family [Prochlorococcus marinus str. MIT 9202]
Length = 842
Score = 359 bits (922), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 171/286 (59%), Positives = 226/286 (79%), Gaps = 13/286 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL +LA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 541 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKSLASYFFGSEEAMIRLDMSEFMERHT 600
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGF GGQLTEAVR RP++V+LFDE+EKAH DV N++LQLL+DGR+TD
Sbjct: 601 VSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEVEKAHPDVFNLLLQLLEDGRLTDS 660
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-----------ESILGS--DQMERGVAEELRRRFR 168
KG+TVD KNT++IMTSNIG VI + +S+ S ++++ V EEL++ FR
Sbjct: 661 KGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFSGDSVEDSQYNRIKSLVNEELKQYFR 720
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNR+DE+IVFRQL K ++ EI +IML+E++ RL+ K ++L VT FK++L+EEGYNP
Sbjct: 721 PEFLNRLDEIIVFRQLTKNEVKEIAEIMLQEVFARLQDKGIKLNVTDAFKERLVEEGYNP 780
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
SYGARPLRRA+ RLLED+LAE +L+G I+ GD +D D V +
Sbjct: 781 SYGARPLRRAVMRLLEDSLAEEVLSGRIKDGDKALVDIDDNKKVTI 826
>gi|425451878|ref|ZP_18831697.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 7941]
gi|389766574|emb|CCI07823.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 7941]
Length = 821
Score = 359 bits (922), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 171/283 (60%), Positives = 224/283 (79%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS++AM+R+DMSEYME+HT
Sbjct: 523 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEDAMIRLDMSEYMERHT 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 583 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSNIG VI + ++ +++ V EEL++ FRP
Sbjct: 643 KGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFADNQAEAQYNRIRSLVNEELKQYFRP 702
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQLNK ++ EI +I+LK++++RL +N+ L+VT FK++LIEEGYNP+
Sbjct: 703 EFLNRLDEIIVFRQLNKEEVKEIAEILLKDVFKRLTEQNITLSVTDKFKERLIEEGYNPA 762
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED LAE IL+G + GD+ +D D G V
Sbjct: 763 YGARPLRRAIMRLLEDVLAEEILSGRVSGGDTAMVDIDEEGKV 805
>gi|284929449|ref|YP_003421971.1| ATPase with chaperone activity, ATP-binding subunit [cyanobacterium
UCYN-A]
gi|284809893|gb|ADB95590.1| ATPase with chaperone activity, ATP-binding subunit [cyanobacterium
UCYN-A]
Length = 825
Score = 359 bits (922), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 174/283 (61%), Positives = 217/283 (76%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS++AMVR+DMSEYME+HT
Sbjct: 523 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEDAMVRLDMSEYMERHT 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++VILFDEIEKAH D+ N++LQ+L+DGR+TD
Sbjct: 583 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVILFDEIEKAHPDIFNMLLQILEDGRLTDA 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMERG------------VAEELRRRFRP 169
KG+TVD KNT++IMTSNIG VI + + E V EEL+ FRP
Sbjct: 643 KGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFENNQADAQYNRIRSLVNEELKEYFRP 702
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQLNK ++ EI +I+LKE++ RL K + L VT FK++L+EEGYNPS
Sbjct: 703 EFLNRLDEIIVFRQLNKEEVKEISEILLKEVFARLTEKEITLQVTDKFKERLVEEGYNPS 762
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED LAE IL+G ++ GD +D D G V
Sbjct: 763 YGARPLRRAIMRLLEDILAEEILSGKVREGDIAEVDIDEQGQV 805
>gi|428219225|ref|YP_007103690.1| ATPase [Pseudanabaena sp. PCC 7367]
gi|427991007|gb|AFY71262.1| ATPase AAA-2 domain protein [Pseudanabaena sp. PCC 7367]
Length = 831
Score = 359 bits (922), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 173/284 (60%), Positives = 223/284 (78%), Gaps = 12/284 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG++ P+RPI+SF+F+GPTGVGKTEL ALA +FGS++AM+R+DMSE+ME+HT
Sbjct: 524 AIRRARVGLKSPDRPIASFIFSGPTGVGKTELTKALATYFFGSEDAMIRLDMSEFMERHT 583
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 584 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQILEDGRLTDS 643
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESI-LGSDQMERG-----------VAEELRRRFRP 169
KG+TVD KNT++IMTSNIG VI + +I LG D E V EEL++ FRP
Sbjct: 644 KGRTVDFKNTLLIMTSNIGSKVIEKGAITLGFDIAEDEEESKYQRIRSLVNEELKQYFRP 703
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K ++ EI +++LKE++ RL K++EL+VT F +L+EEGYNPS
Sbjct: 704 EFLNRLDEIIVFRQLTKDEVKEIANLLLKEVFVRLREKDIELSVTTKFMDRLVEEGYNPS 763
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
YGARPLRRAI RLLED+LAE ILTG ++ G +V MD D ++
Sbjct: 764 YGARPLRRAIMRLLEDSLAEEILTGKVRAGAAVEMDVDDDNKIV 807
>gi|359488557|ref|XP_003633778.1| PREDICTED: LOW QUALITY PROTEIN: chaperone protein ClpC2,
chloroplastic-like [Vitis vinifera]
Length = 588
Score = 359 bits (922), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 184/265 (69%), Positives = 221/265 (83%), Gaps = 2/265 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
L R GIRDP RPI+SFLFTGPTGVGKTELA +A EYFGSKEAMVRIDMSEYMEKHT
Sbjct: 322 ALRRDGAGIRDPTRPIASFLFTGPTGVGKTELAKLIALEYFGSKEAMVRIDMSEYMEKHT 381
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ GSPPGYVG + GGQLTEAVR RP++++LFDEIEKAHRDV+NVMLQ+LDDGR+TDG
Sbjct: 382 VSRLCGSPPGYVGHDEGGQLTEAVRRRPYNLVLFDEIEKAHRDVMNVMLQILDDGRLTDG 441
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESI-LGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
KG+TVD KNT+IIMTSNIG S+I + I LG +Q++ VAEEL++ F PEFLNR+DEVIV
Sbjct: 442 KGRTVDFKNTLIIMTSNIGGSLITQTKIQLGFEQVKNLVAEELKKNFLPEFLNRLDEVIV 501
Query: 181 FRQLNKMQLMEIVDIMLKEIYERL-EAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
F+QL+K QL EIVDI L+E+Y R EAKN+ + VT K+KL+EEG++P YGARPLRRAI
Sbjct: 502 FKQLSKPQLREIVDIRLEEVYTRFEEAKNINVEVTEELKEKLVEEGFSPGYGARPLRRAI 561
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTM 264
LLED +A++IL G I GD+V++
Sbjct: 562 VSLLEDKVADMILEGTIVEGDTVSI 586
>gi|88808913|ref|ZP_01124422.1| ATPase [Synechococcus sp. WH 7805]
gi|88786855|gb|EAR18013.1| ATPase [Synechococcus sp. WH 7805]
Length = 857
Score = 359 bits (922), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 174/293 (59%), Positives = 226/293 (77%), Gaps = 13/293 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS++AM+R+DMSE+ME+HT
Sbjct: 555 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEDAMIRLDMSEFMERHT 614
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGF GGQLTEAVR RP++V+LFDEIEKAH DV N++LQLL+DGR+TD
Sbjct: 615 VSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRLTDS 674
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARE------SILGSDQMERG-------VAEELRRRFR 168
KG+TVD KNT+IIMTSNIG VI + G + E V EEL++ FR
Sbjct: 675 KGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGENAEENQYNRIRSLVNEELKQYFR 734
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNR+DE+IVFRQLN+ ++ EI +IML+E++ R+ K + LTV+ FK++L+EEGYNP
Sbjct: 735 PEFLNRLDEIIVFRQLNRDEVKEIAEIMLREVFGRIGEKGITLTVSDAFKERLVEEGYNP 794
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGS 281
+YGARPLRRA+ RLLED+LAE +LTG I+ GD +D + G V+ + +R S
Sbjct: 795 AYGARPLRRAVMRLLEDSLAEEVLTGRIKDGDEAEVDVEDGKVVVKHLNRTPS 847
>gi|428207100|ref|YP_007091453.1| ATPase [Chroococcidiopsis thermalis PCC 7203]
gi|428009021|gb|AFY87584.1| ATPase AAA-2 domain protein [Chroococcidiopsis thermalis PCC 7203]
Length = 828
Score = 359 bits (922), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 169/283 (59%), Positives = 222/283 (78%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++P+RPI+SF+F+GPTGVGKTELA +LA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 530 AIRRARVGLKNPDRPIASFIFSGPTGVGKTELAKSLAAYFFGSEEAMIRLDMSEFMERHT 589
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG++ GGQLTEAVR +P++V+LFDEIEKAH DV N++LQ++DDGR+TD
Sbjct: 590 VSKLIGSPPGYVGYDEGGQLTEAVRRKPYTVLLFDEIEKAHPDVFNMLLQIMDDGRLTDA 649
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS------------DQMERGVAEELRRRFRP 169
KG+TVD KNT+II+TSNIG VI + D++ V EEL++ FRP
Sbjct: 650 KGRTVDFKNTLIILTSNIGSRVIEKGGGGIGFELGGDRADAQYDRVRNLVQEELKQHFRP 709
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQLNK ++ +I DIML+EI RL +++ L VT FK K+++EGYNPS
Sbjct: 710 EFLNRLDEIIVFRQLNKNEVKQIADIMLQEISNRLTERSITLKVTERFKDKVVDEGYNPS 769
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRA+ RLLED+LAE +L+G I GD+ +D D+ G V
Sbjct: 770 YGARPLRRAMMRLLEDSLAEAMLSGRINDGDTALVDVDADGQV 812
>gi|254422552|ref|ZP_05036270.1| ATPase, AAA family [Synechococcus sp. PCC 7335]
gi|196190041|gb|EDX85005.1| ATPase, AAA family [Synechococcus sp. PCC 7335]
Length = 826
Score = 359 bits (921), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 173/285 (60%), Positives = 222/285 (77%), Gaps = 12/285 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG++ PNRPI+SF+F+GPTGVGKTELA +LA +FG++EAM+R+DMSE+ME+HT
Sbjct: 527 AIRRARVGLKSPNRPIASFVFSGPTGVGKTELAKSLATYFFGAEEAMIRLDMSEFMERHT 586
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 587 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 646
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESI-----LGSDQMERG-------VAEELRRRFRP 169
KG+TVD KNT++I+TSNIG VI + L +DQ E V EEL++ FRP
Sbjct: 647 KGRTVDFKNTLLILTSNIGSKVIEKGGGGLGFELEADQAESQYNRIRSLVNEELKQYFRP 706
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K ++ EI I+LKE++ RLE + + L VT FK +L+EEGYNPS
Sbjct: 707 EFLNRLDEIIVFRQLTKDEVKEISVILLKEVFSRLEEQGITLEVTDKFKDRLVEEGYNPS 766
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
YGARPLRRAI RLLED+LAE IL+G IQ GD+ +D G +++
Sbjct: 767 YGARPLRRAIMRLLEDSLAEEILSGRIQDGDTAVVDVGEDGKIVV 811
>gi|123968727|ref|YP_001009585.1| ClpC [Prochlorococcus marinus str. AS9601]
gi|123198837|gb|ABM70478.1| ClpC [Prochlorococcus marinus str. AS9601]
Length = 842
Score = 359 bits (921), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 171/286 (59%), Positives = 226/286 (79%), Gaps = 13/286 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL +LA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 541 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKSLASYFFGSEEAMIRLDMSEFMERHT 600
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGF GGQLTEAVR RP++V+LFDE+EKAH DV N++LQLL+DGR+TD
Sbjct: 601 VSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEVEKAHPDVFNLLLQLLEDGRLTDS 660
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-----------ESILGS--DQMERGVAEELRRRFR 168
KG+TVD KNT++IMTSNIG VI + +S+ S ++++ V EEL++ FR
Sbjct: 661 KGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFSGDSVEDSQYNRIKSLVNEELKQYFR 720
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNR+DE+IVFRQL K ++ I +IML+E++ RL+ K ++L VT FK++L+EEGYNP
Sbjct: 721 PEFLNRLDEIIVFRQLTKNEVKHIAEIMLQEVFARLQDKGIKLDVTDAFKERLVEEGYNP 780
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
SYGARPLRRA+ RLLED+LAE +L+G I+ GD +D D VI+
Sbjct: 781 SYGARPLRRAVMRLLEDSLAEEVLSGRIKDGDKALVDIDDNKKVII 826
>gi|33861644|ref|NP_893205.1| ClpC [Prochlorococcus marinus subsp. pastoris str. CCMP1986]
gi|33634221|emb|CAE19547.1| ClpC [Prochlorococcus marinus subsp. pastoris str. CCMP1986]
Length = 842
Score = 359 bits (921), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 171/286 (59%), Positives = 227/286 (79%), Gaps = 13/286 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL +LA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 541 AIRRARVGLQNPNRPIASFIFSGPTGVGKTELTKSLASYFFGSEEAMIRLDMSEFMERHT 600
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGF GGQLTEAVR RP++V+LFDE+EKAH DV N++LQLL+DGR+TD
Sbjct: 601 VSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEVEKAHPDVFNLLLQLLEDGRLTDS 660
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-----------ESILGS--DQMERGVAEELRRRFR 168
KG+TVD KNT++IMTSNIG VI + +S+ S ++++ V EEL++ FR
Sbjct: 661 KGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFSGDSVEDSQYNRIKSLVNEELKQYFR 720
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNR+DE+IVFRQL+K ++ +I +IMLKE++ RL K ++L VT FK++L+EEGYNP
Sbjct: 721 PEFLNRLDEIIVFRQLSKNEVKDIAEIMLKEVFSRLNEKGIKLDVTDAFKERLVEEGYNP 780
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
+YGARPLRRA+ RLLED+LAE +L+G I+ GD +D D VI+
Sbjct: 781 AYGARPLRRAVMRLLEDSLAEEVLSGRIKDGDKAIVDIDENKKVIV 826
>gi|359457125|ref|ZP_09245688.1| ATP-dependent protease, ATP-binding subunit ClpC [Acaryochloris sp.
CCMEE 5410]
Length = 822
Score = 359 bits (921), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 172/283 (60%), Positives = 222/283 (78%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAM+R+DMSEYME+HT
Sbjct: 524 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALATYFFGSEEAMIRLDMSEYMERHT 583
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 584 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 643
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSNIG VI + E+ +++ V EEL+ FRP
Sbjct: 644 KGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFAEDEADSQYNRIRSLVNEELKGYFRP 703
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQLNK ++ EI +++LKE++ RLE K++ L +T FK++L+EEGYNPS
Sbjct: 704 EFLNRLDEIIVFRQLNKDEVKEISELLLKEVFVRLEEKSITLNITERFKERLVEEGYNPS 763
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED LAE IL+G ++ GD+ +D D V
Sbjct: 764 YGARPLRRAIMRLLEDTLAEEILSGRVKEGDTAIVDVDEDQQV 806
>gi|78213152|ref|YP_381931.1| ATPase [Synechococcus sp. CC9605]
gi|78197611|gb|ABB35376.1| ATPase [Synechococcus sp. CC9605]
Length = 846
Score = 359 bits (921), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 175/290 (60%), Positives = 227/290 (78%), Gaps = 14/290 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 544 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALATYFFGSEEAMIRLDMSEFMERHT 603
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGF GGQLTEAVR RP++V+LFDEIEKAH DV N++LQLL+DGR+TD
Sbjct: 604 VSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRLTDS 663
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-----------ESILGSD--QMERGVAEELRRRFR 168
KG+TVD KNT+IIMTSNIG VI + ES S ++ V EEL++ FR
Sbjct: 664 KGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGESAEESQYTRIRSLVNEELKQYFR 723
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNR+DE+IVFRQLN+ ++ EI +IMLKE++ R+ K + LTV+ FK++L+EEGYNP
Sbjct: 724 PEFLNRLDEIIVFRQLNRDEVKEIAEIMLKEVFGRMGDKGITLTVSDAFKERLVEEGYNP 783
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHR 278
+YGARPLRRA+ RLLED+LAE +L+G I+ G+ +D D V++ RH+
Sbjct: 784 AYGARPLRRAVMRLLEDSLAEEVLSGRIKDGEHAEVDVDENKKVVV-RHK 832
>gi|124026198|ref|YP_001015314.1| ClpC [Prochlorococcus marinus str. NATL1A]
gi|123961266|gb|ABM76049.1| ClpC [Prochlorococcus marinus str. NATL1A]
Length = 855
Score = 358 bits (920), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 174/299 (58%), Positives = 234/299 (78%), Gaps = 14/299 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 553 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEFMERHT 612
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGF GGQLTEAVR RP++V+LFDEIEKAH DV N++LQLL++GR+TD
Sbjct: 613 VSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEEGRLTDS 672
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-----------ESILGS--DQMERGVAEELRRRFR 168
KG+TVD KNT+IIMTSNIG VI + E++ + ++++ V EEL++ FR
Sbjct: 673 KGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGENLEDTQYNRIKSLVNEELKQYFR 732
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNR+DE+IVFRQL++ ++ +I +IMLKE++ R++ K + LTV+ FK++L+EEGYNP
Sbjct: 733 PEFLNRLDEIIVFRQLSRDEVKDIAEIMLKEVFSRIKDKGISLTVSEDFKERLVEEGYNP 792
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM-YRHRNGSMTVCA 286
SYGARPLRRA+ RLLED+LAE +L+G I+ GD +D D VI+ + ++GS A
Sbjct: 793 SYGARPLRRAVMRLLEDSLAEEVLSGRIKDGDKAEVDIDESKKVIVKHLGKDGSKPELA 851
>gi|159903639|ref|YP_001550983.1| ClpC [Prochlorococcus marinus str. MIT 9211]
gi|159888815|gb|ABX09029.1| ClpC [Prochlorococcus marinus str. MIT 9211]
Length = 859
Score = 358 bits (920), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 174/295 (58%), Positives = 231/295 (78%), Gaps = 14/295 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 557 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEFMERHT 616
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGF GGQLTEAVR RP++V+LFDEIEK+H DV N++LQLL++GR+TD
Sbjct: 617 VSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKSHPDVFNLLLQLLEEGRLTDS 676
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-----------ESILGS--DQMERGVAEELRRRFR 168
KG+TVD KNT+IIMTSNIG VI + ESI S ++++ V EEL++ FR
Sbjct: 677 KGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGESIEDSQYNRIKSLVNEELKQYFR 736
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNR+DE+IVFRQL++ ++ +I +IML E++ R++ K + L+VT FK++L+EEGYNP
Sbjct: 737 PEFLNRLDEIIVFRQLSRDEVKDIAEIMLNEVFLRIKDKGITLSVTEAFKERLVEEGYNP 796
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMT 283
SYGARPLRRA+ RLLED+LAE +L+G I+ GD +D D V++ +H N T
Sbjct: 797 SYGARPLRRAVMRLLEDSLAEEVLSGRIKDGDKAEVDIDENKKVVV-KHINKGAT 850
>gi|428223959|ref|YP_007108056.1| ATPase [Geitlerinema sp. PCC 7407]
gi|427983860|gb|AFY65004.1| ATPase AAA-2 domain protein [Geitlerinema sp. PCC 7407]
Length = 822
Score = 358 bits (920), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 175/283 (61%), Positives = 218/283 (77%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS++AM+R+DMSEYME+HT
Sbjct: 524 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALASYFFGSEDAMIRLDMSEYMERHT 583
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 584 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 643
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARES-----ILGSDQMERG-------VAEELRRRFRP 169
KG+TVD KNT++IMTSNIG VI + DQ + V EEL++ FRP
Sbjct: 644 KGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFAEDQADSQYNRIRSLVNEELKQYFRP 703
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K ++ EI DIML E++ RL + + L VT FK +L+EEGYNPS
Sbjct: 704 EFLNRVDEIIVFRQLKKDEVKEIADIMLHEVFGRLGEQGIVLEVTERFKDRLVEEGYNPS 763
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED+LAE IL+G IQ GD+ +D D G V
Sbjct: 764 YGARPLRRAIMRLLEDSLAEEILSGRIQEGDTAVVDVDEEGQV 806
>gi|218438847|ref|YP_002377176.1| ATPase AAA [Cyanothece sp. PCC 7424]
gi|218171575|gb|ACK70308.1| ATPase AAA-2 domain protein [Cyanothece sp. PCC 7424]
Length = 821
Score = 358 bits (920), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 172/283 (60%), Positives = 219/283 (77%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS++AM+R+DMSE+ME+HT
Sbjct: 523 AIRRARVGLKNPNRPIASFVFSGPTGVGKTELTKALAAYFFGSEDAMIRLDMSEFMERHT 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 583 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNILLQILEDGRLTDA 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESI-----LGSDQMERG-------VAEELRRRFRP 169
KG+TVD KNT++IMTSNIG VI + +DQ E V EEL++ FRP
Sbjct: 643 KGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFETDQAEAQYNRIRSLVNEELKQYFRP 702
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQLN+ ++ +I DI+LKE++ RL K + L VT FK +L+EEGYNP+
Sbjct: 703 EFLNRLDEIIVFRQLNRDEVTDIADILLKEVFGRLTEKGITLEVTQKFKDRLVEEGYNPA 762
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED LAE IL+G ++ GD+ D D G V
Sbjct: 763 YGARPLRRAIMRLLEDVLAEEILSGRVKEGDTAVADIDEEGKV 805
>gi|126696533|ref|YP_001091419.1| ClpC [Prochlorococcus marinus str. MIT 9301]
gi|126543576|gb|ABO17818.1| ClpC [Prochlorococcus marinus str. MIT 9301]
Length = 841
Score = 358 bits (919), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 171/286 (59%), Positives = 227/286 (79%), Gaps = 13/286 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL +LA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 540 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKSLASYFFGSEEAMIRLDMSEFMERHT 599
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGF GGQLTEAVR RP++V+LFDE+EKAH DV N++LQLL+DGR+TD
Sbjct: 600 VSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEVEKAHPDVFNLLLQLLEDGRLTDS 659
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-----------ESILGS--DQMERGVAEELRRRFR 168
KG+TVD KNT++IMTSNIG VI + +S+ S ++++ V EEL++ FR
Sbjct: 660 KGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFSGDSVEDSQYNRIKSLVNEELKQYFR 719
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNR+DE+IVFRQL K ++ EI +IML+E++ RL+ K ++L VT FK++L+EEGYNP
Sbjct: 720 PEFLNRLDEIIVFRQLTKNEVKEIAEIMLQEVFIRLQDKGIKLNVTDAFKERLVEEGYNP 779
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
SYGARPLRRA+ RLLED+LAE +L+G I+ GD+ +D D V +
Sbjct: 780 SYGARPLRRAVMRLLEDSLAEEVLSGRIKDGDNALVDIDDNKKVTI 825
>gi|755163|gb|AAB67745.1| ClpC [Synechococcus elongatus PCC 7942]
Length = 839
Score = 358 bits (919), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 174/284 (61%), Positives = 219/284 (77%), Gaps = 13/284 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAM+R+DMSEYME+HT
Sbjct: 540 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEYMERHT 599
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+L DEIEKAH DV N++LQLL+DGR+TD
Sbjct: 600 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLLDEIEKAHPDVFNLLLQLLEDGRLTDA 659
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARES------ILGSDQMERG-------VAEELRRRFR 168
KG+TVD KNT+II+TSNIG VI + G D+ E V EEL++ FR
Sbjct: 660 KGRTVDFKNTLIILTSNIGSKVIEKGGGGLGFEFSGVDEAENQYNRIRSLVNEELKQYFR 719
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNR+DE+IVFRQLNK ++ EI DIML+E++ R+ K + L+VT FK +L+EEGYNP
Sbjct: 720 PEFLNRLDEIIVFRQLNKEEVKEIADIMLREVFGRMLEKGISLSVTEKFKDRLVEEGYNP 779
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
SYGARPLRRAI RLLED+LAE L+G ++ GD+ +D G V
Sbjct: 780 SYGARPLRRAIMRLLEDSLAEEFLSGKLREGDTAVVDIGEEGKV 823
>gi|282896301|ref|ZP_06304323.1| UvrB/UvrC protein [Raphidiopsis brookii D9]
gi|281198797|gb|EFA73676.1| UvrB/UvrC protein [Raphidiopsis brookii D9]
Length = 823
Score = 358 bits (919), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 178/290 (61%), Positives = 225/290 (77%), Gaps = 13/290 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTELA +LA +FGS+EAM+R+DMSEYME+HT
Sbjct: 524 AIRRARVGLKNPNRPIASFVFSGPTGVGKTELAKSLASYFFGSEEAMIRLDMSEYMERHT 583
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 584 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 643
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-ESILGSDQMERG-----------VAEELRRRFRP 169
KG+TVD KNT++I+TSNIG VI + S +G + E V EEL++ FRP
Sbjct: 644 KGRTVDFKNTLLILTSNIGSKVIEKGGSGIGFEFAEDAAESQYNRIRSLVNEELKQYFRP 703
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQLNK ++ EI DIMLKE++ RL K + L V+ FK +LI+EGY+PS
Sbjct: 704 EFLNRLDEIIVFRQLNKAEVTEIADIMLKEVFGRLTEKGIALEVSDRFKDRLIQEGYSPS 763
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV-IMYRHR 278
YGARPLRRAI RLLED+LAE IL+G I+ GD +D D G V + R R
Sbjct: 764 YGARPLRRAIMRLLEDSLAEEILSGRIKDGDIAYVDIDENGVVQVTARQR 813
>gi|282900556|ref|ZP_06308498.1| UvrB/UvrC protein [Cylindrospermopsis raciborskii CS-505]
gi|281194356|gb|EFA69311.1| UvrB/UvrC protein [Cylindrospermopsis raciborskii CS-505]
Length = 823
Score = 358 bits (919), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 178/290 (61%), Positives = 225/290 (77%), Gaps = 13/290 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTELA +LA +FGS+EAM+R+DMSEYME+HT
Sbjct: 524 AIRRARVGLKNPNRPIASFVFSGPTGVGKTELAKSLASYFFGSEEAMIRLDMSEYMERHT 583
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 584 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 643
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-ESILGSDQMERG-----------VAEELRRRFRP 169
KG+TVD KNT++I+TSNIG VI + S +G + E V EEL++ FRP
Sbjct: 644 KGRTVDFKNTLLILTSNIGSKVIEKGGSGIGFEFAEDAAESQYNRIRSLVNEELKQYFRP 703
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQLNK ++ EI DIMLKE++ RL K + L V+ FK +LI+EGY+PS
Sbjct: 704 EFLNRLDEIIVFRQLNKAEVTEIADIMLKEVFGRLTEKGIALEVSDRFKDRLIQEGYSPS 763
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV-IMYRHR 278
YGARPLRRAI RLLED+LAE IL+G I+ GD +D D G V + R R
Sbjct: 764 YGARPLRRAIMRLLEDSLAEEILSGRIKDGDIAYVDIDENGVVQVTARQR 813
>gi|113476064|ref|YP_722125.1| ATPase [Trichodesmium erythraeum IMS101]
gi|110167112|gb|ABG51652.1| ATPase AAA-2 [Trichodesmium erythraeum IMS101]
Length = 825
Score = 358 bits (918), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 172/287 (59%), Positives = 222/287 (77%), Gaps = 12/287 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAM+R+DMSEYME+HT
Sbjct: 524 AIRRARVGLKNPNRPIASFVFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEYMERHT 583
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 584 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 643
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT+IIMTSNIG VI + E+ +++ V EEL++ FRP
Sbjct: 644 KGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSENEADAQYNRIRNLVNEELKQYFRP 703
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K ++ EI I+LKE++ RL K ++L +T F+++L+EEGYNPS
Sbjct: 704 EFLNRLDEIIVFRQLTKDEVKEISVILLKEVFSRLTEKGIKLEITDRFQERLVEEGYNPS 763
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYR 276
YGARPLRRAI RLLED+LAE IL G I GD+ +D G +I+ +
Sbjct: 764 YGARPLRRAIMRLLEDSLAEEILAGKINEGDTAVVDVGESGQIIVSK 810
>gi|81299071|ref|YP_399279.1| ATPase [Synechococcus elongatus PCC 7942]
gi|81167952|gb|ABB56292.1| ATPase [Synechococcus elongatus PCC 7942]
Length = 824
Score = 358 bits (918), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 174/284 (61%), Positives = 219/284 (77%), Gaps = 13/284 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAM+R+DMSEYME+HT
Sbjct: 525 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEYMERHT 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+L DEIEKAH DV N++LQLL+DGR+TD
Sbjct: 585 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLLDEIEKAHPDVFNLLLQLLEDGRLTDA 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARES------ILGSDQMERG-------VAEELRRRFR 168
KG+TVD KNT+II+TSNIG VI + G D+ E V EEL++ FR
Sbjct: 645 KGRTVDFKNTLIILTSNIGSKVIEKGGGGLGFEFSGVDEAENQYNRIRSLVNEELKQYFR 704
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNR+DE+IVFRQLNK ++ EI DIML+E++ R+ K + L+VT FK +L+EEGYNP
Sbjct: 705 PEFLNRLDEIIVFRQLNKEEVKEIADIMLREVFGRMLEKGISLSVTEKFKDRLVEEGYNP 764
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
SYGARPLRRAI RLLED+LAE L+G ++ GD+ +D G V
Sbjct: 765 SYGARPLRRAIMRLLEDSLAEEFLSGKLREGDTAVVDIGEEGKV 808
>gi|434395188|ref|YP_007130135.1| ATPase AAA-2 domain protein [Gloeocapsa sp. PCC 7428]
gi|428267029|gb|AFZ32975.1| ATPase AAA-2 domain protein [Gloeocapsa sp. PCC 7428]
Length = 822
Score = 358 bits (918), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 169/297 (56%), Positives = 227/297 (76%), Gaps = 12/297 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG++ P+RPI+SF+F+GPTGVGKTEL ALA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 524 AIRRARVGLKSPDRPIASFIFSGPTGVGKTELTKALASYFFGSEEAMIRLDMSEFMERHT 583
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG++ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ++DDGR+TD
Sbjct: 584 VSKLIGSPPGYVGYDEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQIMDDGRLTDA 643
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSNIG VI + +S + + V E+L++ FRP
Sbjct: 644 KGRTVDFKNTLLIMTSNIGSRVIEKGGGGIGFEIADSQSESSYNHIRNLVNEDLKQHFRP 703
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+D++IVFRQL+K ++ +I DI+L+E+ RL + +EL VT FK ++++EGYNPS
Sbjct: 704 EFLNRVDDIIVFRQLSKAEVTQIADILLREVSTRLVEQGIELEVTAKFKDRVVQEGYNPS 763
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMTVCA 286
YGARPLRRAI RLLED+LAE +L G I+VGD+ +D D G V + + N + + +
Sbjct: 764 YGARPLRRAIMRLLEDSLAEAMLAGSIKVGDTAIVDIDDRGEVKVEKVANKELLLSS 820
>gi|119487029|ref|ZP_01620901.1| ATP-dependent Clp protease regulatory subunit [Lyngbya sp. PCC
8106]
gi|119455958|gb|EAW37092.1| ATP-dependent Clp protease regulatory subunit [Lyngbya sp. PCC
8106]
Length = 825
Score = 358 bits (918), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 174/285 (61%), Positives = 219/285 (76%), Gaps = 12/285 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAMVR+DMSE+ME+HT
Sbjct: 525 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALATYFFGSEEAMVRLDMSEFMERHT 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 585 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT+IIMTSNIG VI + ES ++ V EEL++ FRP
Sbjct: 645 KGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSENESDAQYHRIRNLVNEELKQYFRP 704
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K ++ EI IML E++ RL K ++L +T F ++L+EEGYNPS
Sbjct: 705 EFLNRLDEIIVFRQLTKDEVKEIAVIMLNEVFSRLTEKGIKLEITDRFNERLVEEGYNPS 764
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
YGARPLRRAI RLLED+LAE IL+G I GD+ +D D G V +
Sbjct: 765 YGARPLRRAIMRLLEDSLAEEILSGRITEGDTAVVDVDGDGQVTV 809
>gi|158335106|ref|YP_001516278.1| ATP-dependent protease, ATP-binding subunit ClpC [Acaryochloris
marina MBIC11017]
gi|158305347|gb|ABW26964.1| ATP-dependent protease, ATP-binding subunit ClpC [Acaryochloris
marina MBIC11017]
Length = 822
Score = 357 bits (917), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 171/283 (60%), Positives = 221/283 (78%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAM+R+DMSEYME+HT
Sbjct: 524 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALATYFFGSEEAMIRLDMSEYMERHT 583
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 584 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 643
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSNIG VI + E+ +++ V EEL+ FRP
Sbjct: 644 KGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFAEDEADSQYNRIRSLVNEELKGYFRP 703
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K ++ EI +++LKE++ RLE K++ L +T FK++L+EEGYNPS
Sbjct: 704 EFLNRLDEIIVFRQLTKDEVKEISELLLKEVFSRLEEKSITLNITDRFKERLVEEGYNPS 763
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED LAE IL+G ++ GD+ +D D V
Sbjct: 764 YGARPLRRAIMRLLEDTLAEEILSGRVKEGDTAIVDVDEDQQV 806
>gi|123966412|ref|YP_001011493.1| ClpC [Prochlorococcus marinus str. MIT 9515]
gi|123200778|gb|ABM72386.1| ClpC [Prochlorococcus marinus str. MIT 9515]
Length = 843
Score = 357 bits (917), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 170/286 (59%), Positives = 225/286 (78%), Gaps = 13/286 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL +LA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 542 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKSLASYFFGSEEAMIRLDMSEFMERHT 601
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGF GGQLTEAVR RP++V+LFDE+EKAH DV N++LQLL+DGR+TD
Sbjct: 602 VSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEVEKAHPDVFNLLLQLLEDGRLTDS 661
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-----------ESILGS--DQMERGVAEELRRRFR 168
KG+TVD KNT++IMTSNIG VI + +S+ S ++++ V EEL++ FR
Sbjct: 662 KGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFSGDSVEDSQYNRIKSLVNEELKQYFR 721
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNR+DE+IVFRQL K ++ +I +IMLKE++ RL K ++L VT FK++L+EEGYNP
Sbjct: 722 PEFLNRLDEIIVFRQLTKNEVKDIAEIMLKEVFSRLNEKGIKLDVTEAFKERLVEEGYNP 781
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
+YGARPLRRA+ RLLED+LAE +L+G I+ GD +D D V +
Sbjct: 782 AYGARPLRRAVMRLLEDSLAEEVLSGRIKDGDKALVDIDENKKVTV 827
>gi|298492878|ref|YP_003723055.1| ATPase AAA-2 domain-containing protein ['Nostoc azollae' 0708]
gi|298234796|gb|ADI65932.1| ATPase AAA-2 domain protein ['Nostoc azollae' 0708]
Length = 824
Score = 357 bits (917), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 173/283 (61%), Positives = 225/283 (79%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTELA +LA +FGS+EAM+R+DMSEYME+HT
Sbjct: 525 AIRRARVGLKNPNRPIASFVFSGPTGVGKTELAKSLASYFFGSEEAMIRLDMSEYMERHT 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 585 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-ESILGSDQMERG-----------VAEELRRRFRP 169
KG+TVD KNT++I+TSNIG VI + S +G + E V EEL++ FRP
Sbjct: 645 KGRTVDFKNTLLILTSNIGSKVIEKGGSGIGFEFAEDATESQYNRIRSLVNEELKQYFRP 704
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQLNK+++ +I +IMLKE++ RL K + L V+ FK++L++EGY+PS
Sbjct: 705 EFLNRLDEIIVFRQLNKLEVTQIAEIMLKEVFGRLTEKGITLEVSDRFKERLVQEGYSPS 764
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED+LAE IL+G I+ GD+ +D D G V
Sbjct: 765 YGARPLRRAIMRLLEDSLAEEILSGRIKDGDTALVDVDENGIV 807
>gi|254414473|ref|ZP_05028239.1| ATPase, AAA family [Coleofasciculus chthonoplastes PCC 7420]
gi|196178703|gb|EDX73701.1| ATPase, AAA family [Coleofasciculus chthonoplastes PCC 7420]
Length = 824
Score = 357 bits (917), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 173/283 (61%), Positives = 222/283 (78%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTELA +LA +FGS+EAM+R+DMSEYME+HT
Sbjct: 523 AIRRARVGLKNPNRPIASFVFSGPTGVGKTELAKSLAAYFFGSEEAMIRLDMSEYMERHT 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 583 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSNIG VI + E+ +++ V EEL++ FRP
Sbjct: 643 KGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFELSDNEAESQYNRIRSLVNEELKQYFRP 702
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K ++ EI DI+L+E+++RL K + L VT FK++L+EEGY+PS
Sbjct: 703 EFLNRLDEIIVFRQLTKDEIKEICDILLREVFKRLTEKGITLEVTDRFKERLVEEGYSPS 762
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED LAE IL+ +Q GDS +D D G V
Sbjct: 763 YGARPLRRAIMRLLEDVLAEEILSTRLQEGDSAIVDVDEEGKV 805
>gi|11465497|ref|NP_045112.1| Clp protease ATP binding subunit [Cyanidium caldarium]
gi|14194537|sp|Q9TM05.1|CLPC_CYACA RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA
homolog
gi|6466400|gb|AAF12982.1|AF022186_105 unknown [Cyanidium caldarium]
Length = 854
Score = 357 bits (917), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 173/283 (61%), Positives = 221/283 (78%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL A+A +FGS+EAMVR+DMSEYME+HT
Sbjct: 557 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKAMASYFFGSEEAMVRLDMSEYMERHT 616
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 617 VSKLIGSPPGYVGYNEGGQLTEAVRKRPYTVVLFDEIEKAHPDVFNLLLQILEDGRLTDS 676
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR----------ESI--LGSDQMERGVAEELRRRFRP 169
KG+T+D KNT++IMTSNIG VI + E+I L +M V EEL++ FRP
Sbjct: 677 KGRTIDFKNTLLIMTSNIGSKVIEKKGGGLGFELEENIEELQYSRMRNLVNEELKQYFRP 736
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K ++ +I IML+EI+ER++ + + L VT FK LIEEGYNPS
Sbjct: 737 EFLNRVDEIIVFRQLTKDEVRDIAHIMLREIFERVKQQGISLQVTERFKNLLIEEGYNPS 796
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRA+ RLLED+LAE +L+G I+ GD+ +D D V
Sbjct: 797 YGARPLRRALVRLLEDSLAEEVLSGKIKEGDNAMIDVDENKQV 839
>gi|302841992|ref|XP_002952540.1| hypothetical protein VOLCADRAFT_75431 [Volvox carteri f.
nagariensis]
gi|300262179|gb|EFJ46387.1| hypothetical protein VOLCADRAFT_75431 [Volvox carteri f.
nagariensis]
Length = 915
Score = 357 bits (916), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 171/287 (59%), Positives = 221/287 (77%), Gaps = 16/287 (5%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F GPTGVGK+ELA LA YFGS+EAMVR+DMSE+ME+HT
Sbjct: 608 AIRRARVGLKNPNRPIASFIFAGPTGVGKSELAKTLANYYFGSEEAMVRLDMSEFMERHT 667
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG++ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 668 VSKLIGSPPGYVGYQEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 727
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR----------------ESILGSDQMERGVAEELRR 165
KG+TVD KNT+IIMTSN+G SVI + E + +++ V EEL+
Sbjct: 728 KGRTVDFKNTLIIMTSNVGASVIEKGGRSMGFFLRPDDEDMEQDMSYSRIKSLVNEELKS 787
Query: 166 RFRPEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEG 225
FRPEFLNR+DE+IVFRQL K ++ +I DI LK++++R E K +++ VT FK +L++EG
Sbjct: 788 YFRPEFLNRLDEIIVFRQLTKKEVKQIADIFLKDVFKRAEEKGIKIEVTEKFKDRLVDEG 847
Query: 226 YNPSYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
+NP+YGARPLRRAI RL+ED LAE IL G I+ GD V MD D G++
Sbjct: 848 FNPTYGARPLRRAIMRLIEDCLAERILMGDIKEGDVVIMDVDPDGSI 894
>gi|87303420|ref|ZP_01086208.1| endopeptidase Clp ATP-binding chain C [Synechococcus sp. WH 5701]
gi|87282068|gb|EAQ74030.1| endopeptidase Clp ATP-binding chain C [Synechococcus sp. WH 5701]
Length = 856
Score = 357 bits (916), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 173/291 (59%), Positives = 227/291 (78%), Gaps = 14/291 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 555 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEFMERHT 614
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGF GGQLTEAVR RP++V+LFDEIEKAH DV N++LQLL+DGR+TD
Sbjct: 615 VSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRLTDS 674
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR----------ESILGSDQMER---GVAEELRRRFR 168
KG+TVD KNT+IIMTSNIG VI + + + Q R V EEL++ FR
Sbjct: 675 KGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGAAVEETQYNRIRSLVNEELKQYFR 734
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNR+DE+IVFRQL++ ++ EI +IML+E++ R++ K + L+VT FK++L+EEGYNP
Sbjct: 735 PEFLNRLDEIIVFRQLSRDEVKEIAEIMLREVFGRMQEKGIGLSVTEAFKERLVEEGYNP 794
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRN 279
SYGARPLRRA+ RLLED+LAE L+G ++ GDS +D + V++ RH+
Sbjct: 795 SYGARPLRRAVMRLLEDSLAEEFLSGRLKDGDSALVDVNDEKQVVI-RHQT 844
>gi|443476197|ref|ZP_21066115.1| ATPase AAA-2 domain protein [Pseudanabaena biceps PCC 7429]
gi|443018866|gb|ELS33048.1| ATPase AAA-2 domain protein [Pseudanabaena biceps PCC 7429]
Length = 829
Score = 357 bits (916), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 179/294 (60%), Positives = 224/294 (76%), Gaps = 14/294 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG++ PNRPI+SF+F+GPTGVGKTEL ALA +FGS++AM+R+DMSEYME+HT
Sbjct: 526 AIRRARVGLKSPNRPIASFIFSGPTGVGKTELTKALASYFFGSEDAMIRLDMSEYMERHT 585
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 586 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQVLEDGRLTDS 645
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-ESILGSD-----------QMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G VI + LG D ++ V EEL++ FRP
Sbjct: 646 KGRTVDFKNTLLIMTSNVGSKVIEKGGGGLGFDFAASQEDALYTRIRSLVNEELKQYFRP 705
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K ++ EI D+ML E ++R+ KN+ LTVT FK L++EGYNPS
Sbjct: 706 EFLNRLDEIIVFRQLTKPEVKEIADLMLNEFFKRMLDKNIVLTVTERFKDLLVQEGYNPS 765
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGG--NVIMYRHRNGS 281
YGARPLRRAI RLLED+LAE ILTG ++ G SV +D D G VI NGS
Sbjct: 766 YGARPLRRAIMRLLEDSLAEEILTGKVREGASVQVDVDDDGKVKVIEKEALNGS 819
>gi|357152345|ref|XP_003576089.1| PREDICTED: chaperone protein ClpC2, chloroplastic-like
[Brachypodium distachyon]
Length = 943
Score = 357 bits (915), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 176/295 (59%), Positives = 227/295 (76%), Gaps = 19/295 (6%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+RDP+RPI+SF+F GPTGVGK+ELA +LA Y+GS+EAMVR+DMSE+ME+HT
Sbjct: 633 AIRRARVGLRDPSRPIASFIFAGPTGVGKSELAKSLATCYYGSEEAMVRLDMSEFMERHT 692
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V+K GSPPGYVG+ GGQLTEAVR RP++V+L DEIEKAH DV N+MLQ+++DGR+TD
Sbjct: 693 VAKLIGSPPGYVGYSEGGQLTEAVRRRPYTVVLLDEIEKAHPDVFNLMLQIMEDGRLTDS 752
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARES-ILG---SDQMERG--------------VAEEL 163
KG+ VD KNT+IIMTSN+G SVI + LG D +E G V EE+
Sbjct: 753 KGRMVDFKNTLIIMTSNVGSSVIEKGGRQLGFDNGDGVEDGEISSSSSYGRIKSLVDEEM 812
Query: 164 RRRFRPEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIE 223
++ FRPEFLNR+DE+IVFRQLNK ++ EI DIML E+ R++ K +EL VT +FK+ +++
Sbjct: 813 KQYFRPEFLNRLDEMIVFRQLNKFEVKEIADIMLAEVAGRMKEKGIELLVTESFKELVVD 872
Query: 224 EGYNPSYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV-IMYRH 277
EG++PSYGARPLRRAI RLLED LA+ IL ++ GDSV +D DS GNV ++ RH
Sbjct: 873 EGFDPSYGARPLRRAIMRLLEDTLADKILAEEVKEGDSVILDADSAGNVAVLSRH 927
>gi|72382499|ref|YP_291854.1| Clp protease ATP-binding subunit [Prochlorococcus marinus str.
NATL2A]
gi|72002349|gb|AAZ58151.1| ATPase [Prochlorococcus marinus str. NATL2A]
Length = 855
Score = 357 bits (915), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 173/299 (57%), Positives = 234/299 (78%), Gaps = 14/299 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 553 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEFMERHT 612
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGF GGQLTEAVR RP++V+LFDEIEKAH DV N++LQLL++GR+TD
Sbjct: 613 VSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEEGRLTDS 672
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-----------ESILGS--DQMERGVAEELRRRFR 168
KG+TVD KNT++IMTSNIG VI + E++ + ++++ V EEL++ FR
Sbjct: 673 KGRTVDFKNTLVIMTSNIGSKVIEKGGGGLGFEFSGENLEDTQYNRIKSLVNEELKQYFR 732
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNR+DE+IVFRQL++ ++ +I +IMLKE++ R++ K + LTV+ FK++L+EEGYNP
Sbjct: 733 PEFLNRLDEIIVFRQLSRDEVKDIAEIMLKEVFLRIKDKGISLTVSEDFKERLVEEGYNP 792
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM-YRHRNGSMTVCA 286
SYGARPLRRA+ RLLED+LAE +L+G I+ GD +D D VI+ + ++GS A
Sbjct: 793 SYGARPLRRAVMRLLEDSLAEEVLSGRIKDGDKAEVDIDESKKVIVKHLGKDGSKPELA 851
>gi|428220165|ref|YP_007104335.1| chaperone ATPase [Synechococcus sp. PCC 7502]
gi|427993505|gb|AFY72200.1| ATPase with chaperone activity, ATP-binding subunit [Synechococcus
sp. PCC 7502]
Length = 828
Score = 357 bits (915), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 176/284 (61%), Positives = 218/284 (76%), Gaps = 12/284 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAMVR+DMSE+ME+HT
Sbjct: 524 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMVRLDMSEFMERHT 583
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++VILFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 584 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVILFDEIEKAHPDVFNLLLQILEDGRLTDS 643
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARES-----ILGSDQMERG-------VAEELRRRFRP 169
KG+TVD KNT+IIMTSNIG VI + DQ + V EEL++ FRP
Sbjct: 644 KGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFDFAEDQADSAYTRIRSLVNEELKQYFRP 703
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL ++ EI ++ML E+Y+RL+ KN+ L VT FK L+ EGYN S
Sbjct: 704 EFLNRLDEIIVFRQLKIEEIREIAELMLNEVYKRLKEKNITLAVTERFKDLLVREGYNQS 763
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
YGARPLRRAI RLLED+L+E ILTG ++ G SV +D D G VI
Sbjct: 764 YGARPLRRAIMRLLEDSLSEEILTGKVRDGASVIVDVDDDGKVI 807
>gi|414079261|ref|YP_007000685.1| ATP-dependent Clp family protein [Anabaena sp. 90]
gi|413972540|gb|AFW96628.1| ATP-dependent Clp family protein [Anabaena sp. 90]
Length = 838
Score = 356 bits (914), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 175/290 (60%), Positives = 225/290 (77%), Gaps = 12/290 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTELA +LA +FG++EAM+R+DMSEYME+HT
Sbjct: 540 AIRRARVGLKNPNRPIASFVFSGPTGVGKTELAKSLASYFFGAEEAMIRLDMSEYMERHT 599
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 600 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 659
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-ESILGSDQMERG-----------VAEELRRRFRP 169
KG+TVD KNT++I+TSNIG VI + S +G + E V EEL++ FRP
Sbjct: 660 KGRTVDFKNTLLILTSNIGSKVIEKGGSGIGFEFSEDATETQYNRIRSLVNEELKQYFRP 719
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQLNK+++ +I +IMLKE++ RL K + L VT FK +LI EGY+PS
Sbjct: 720 EFLNRLDEIIVFRQLNKLEVTQIAEIMLKEVFGRLTEKGIVLEVTDRFKDRLITEGYSPS 779
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRN 279
YGARPLRRAI RLLED+LAE IL+G I+ GD+ +D D G V + R
Sbjct: 780 YGARPLRRAIMRLLEDSLAEEILSGRIKDGDTALVDVDENGIVQVSSQRT 829
>gi|434396958|ref|YP_007130962.1| ATPase AAA-2 domain protein [Stanieria cyanosphaera PCC 7437]
gi|428268055|gb|AFZ33996.1| ATPase AAA-2 domain protein [Stanieria cyanosphaera PCC 7437]
Length = 822
Score = 356 bits (914), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 173/283 (61%), Positives = 220/283 (77%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAM+R+DMSEYME+HT
Sbjct: 525 AIRRARVGLKNPNRPIASFVFSGPTGVGKTELTKALATYFFGSEEAMIRLDMSEYMERHT 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH D+ N++LQ+L+DGR+TD
Sbjct: 585 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDIFNMLLQILEDGRLTDA 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARES-----ILGSDQMERG-------VAEELRRRFRP 169
KG+TVD KNT+II+TSNIG VI + DQ E V EEL+ FRP
Sbjct: 645 KGRTVDFKNTLIILTSNIGSKVIEKGGGGLGFEFADDQAESQYNRIRSLVNEELKNYFRP 704
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL+K ++ EI +++LKE++ RL +++ L VT FK++L+EEGYNPS
Sbjct: 705 EFLNRLDEIIVFRQLSKDEVKEISELLLKEVFTRLTEQDITLEVTEKFKERLVEEGYNPS 764
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED LAE IL+G + GD+ +D DS G V
Sbjct: 765 YGARPLRRAIMRLLEDVLAEEILSGRLGEGDTAQVDIDSEGKV 807
>gi|434403231|ref|YP_007146116.1| ATPase with chaperone activity, ATP-binding subunit
[Cylindrospermum stagnale PCC 7417]
gi|428257486|gb|AFZ23436.1| ATPase with chaperone activity, ATP-binding subunit
[Cylindrospermum stagnale PCC 7417]
Length = 823
Score = 356 bits (914), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 174/283 (61%), Positives = 220/283 (77%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTELA +LA +FGS+EAM+R+DMSEYME+HT
Sbjct: 524 AIRRARVGLKNPNRPIASFVFSGPTGVGKTELAKSLASYFFGSEEAMIRLDMSEYMERHT 583
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 584 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 643
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESI-----LGSDQMERG-------VAEELRRRFRP 169
KG+TVD KNT++I+TSNIG VI + D E V EEL++ FRP
Sbjct: 644 KGRTVDFKNTLLILTSNIGSKVIEKGGSGIGFEFADDVTESAYNRIRSLVNEELKQYFRP 703
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL+K ++ +I +IMLKE++ RL K + L VT FK +LI+EGY+PS
Sbjct: 704 EFLNRLDEIIVFRQLSKPEVTQIAEIMLKEVFGRLTEKGITLEVTDRFKDRLIDEGYSPS 763
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED+LAE IL+G I+ GD T+D D G V
Sbjct: 764 YGARPLRRAIMRLLEDSLAEEILSGRIKDGDIATVDVDETGTV 806
>gi|71842249|ref|YP_277337.1| Clp protease ATP binding subunit [Emiliania huxleyi]
gi|52547750|gb|AAU81910.1| Clp protease ATP binding subunit [Emiliania huxleyi]
gi|60101492|gb|AAX13836.1| Clp protease ATP binding subunit [Emiliania huxleyi]
gi|336286162|gb|AEI29498.1| Clp protease ATP binding subunit [Emiliania huxleyi]
Length = 817
Score = 356 bits (914), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 166/283 (58%), Positives = 219/283 (77%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SFLF+GPTGVGKTEL ALA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 524 AIRRARVGLKNPNRPIASFLFSGPTGVGKTELTKALATYFFGSEEAMIRLDMSEFMERHT 583
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDE+EKAH DV N+MLQ+ +DGR+TD
Sbjct: 584 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEVEKAHPDVFNLMLQIFEDGRLTDS 643
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESIL------------GSDQMERGVAEELRRRFRP 169
KG+ +D KNT++IMTSNIG VI + ++++ V EEL++ FRP
Sbjct: 644 KGRVIDFKNTLLIMTSNIGSKVIEKGGGGLGFELGEDQDNSAYNRIKSLVNEELKQYFRP 703
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K ++ EI +IMLKE+++R+ K +EL VT FK +LI+EGYNP+
Sbjct: 704 EFLNRLDEIIVFRQLTKSEVGEIAEIMLKEVFDRISQKGIELAVTDRFKARLIDEGYNPA 763
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRA+ RLLED+L+E +L+ +Q GD+ +D D G V
Sbjct: 764 YGARPLRRAVMRLLEDSLSEEVLSERLQSGDAAVVDVDENGKV 806
>gi|257059311|ref|YP_003137199.1| AAA ATPase [Cyanothece sp. PCC 8802]
gi|256589477|gb|ACV00364.1| ATPase AAA-2 domain protein [Cyanothece sp. PCC 8802]
Length = 822
Score = 356 bits (913), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 171/283 (60%), Positives = 221/283 (78%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS++AM+R+DMSEYME+HT
Sbjct: 523 AIRRARVGLKNPNRPIASFVFSGPTGVGKTELTKALAAYFFGSEDAMIRLDMSEYMERHT 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 583 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVI------------ARESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSNIG VI ++ +++ V EEL+ FRP
Sbjct: 643 KGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFEENQNEAQYNRIRSLVNEELKNYFRP 702
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQLNK ++ EI +I+LKE+++RL K++ L VT FK++L+EEGYNP+
Sbjct: 703 EFLNRLDEIIVFRQLNKEEVKEISEILLKEVFKRLTEKHINLQVTDKFKERLVEEGYNPA 762
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED LAE IL+G + GD+ +D D G V
Sbjct: 763 YGARPLRRAIMRLLEDVLAEEILSGRVGEGDTAMVDIDEDGKV 805
>gi|218246261|ref|YP_002371632.1| ATPase AAA [Cyanothece sp. PCC 8801]
gi|218166739|gb|ACK65476.1| ATPase AAA-2 domain protein [Cyanothece sp. PCC 8801]
Length = 822
Score = 356 bits (913), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 171/283 (60%), Positives = 221/283 (78%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS++AM+R+DMSEYME+HT
Sbjct: 523 AIRRARVGLKNPNRPIASFVFSGPTGVGKTELTKALAAYFFGSEDAMIRLDMSEYMERHT 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 583 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVI------------ARESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSNIG VI ++ +++ V EEL+ FRP
Sbjct: 643 KGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFEENQNEAQYNRIRSLVNEELKNYFRP 702
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQLNK ++ EI +I+LKE+++RL K++ L VT FK++L+EEGYNP+
Sbjct: 703 EFLNRLDEIIVFRQLNKEEVKEISEILLKEVFKRLTEKHINLQVTDKFKERLVEEGYNPA 762
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED LAE IL+G + GD+ +D D G V
Sbjct: 763 YGARPLRRAIMRLLEDVLAEEILSGRVGEGDTAMVDIDEDGKV 805
>gi|119512929|ref|ZP_01631992.1| endopeptidase Clp ATP-binding chain [Nodularia spumigena CCY9414]
gi|119462425|gb|EAW43399.1| endopeptidase Clp ATP-binding chain [Nodularia spumigena CCY9414]
Length = 823
Score = 355 bits (912), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 175/283 (61%), Positives = 220/283 (77%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTELA +LA +FGS+EAM+R+DMSEYME+HT
Sbjct: 524 AIRRARVGLKNPNRPIASFVFSGPTGVGKTELAKSLASYFFGSEEAMIRLDMSEYMERHT 583
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 584 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 643
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARES-----ILGSDQMERG-------VAEELRRRFRP 169
KG+TVD KNT++I+TSNIG VI + D E V EEL++ FRP
Sbjct: 644 KGRTVDFKNTLLILTSNIGSKVIEKGGGGIGFEFADDATETQYNRIRSLVNEELKQYFRP 703
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL+K ++ EI +IMLKE++ RL K + L VT FK +LIEEGY+PS
Sbjct: 704 EFLNRLDEIIVFRQLSKPEVTEIAEIMLKEVFGRLTEKGIVLEVTDRFKDRLIEEGYSPS 763
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED+LAE IL+G I+ GD+ +D D G V
Sbjct: 764 YGARPLRRAIMRLLEDSLAEEILSGRIKDGDTALVDVDENGIV 806
>gi|186686024|ref|YP_001869220.1| ATPase [Nostoc punctiforme PCC 73102]
gi|186468476|gb|ACC84277.1| ATPase AAA-2 domain protein [Nostoc punctiforme PCC 73102]
Length = 822
Score = 355 bits (912), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 174/285 (61%), Positives = 223/285 (78%), Gaps = 16/285 (5%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTELA +LA +FGS+EAM+R+DMSEYME+HT
Sbjct: 524 AIRRARVGLKNPNRPIASFVFSGPTGVGKTELAKSLAAYFFGSEEAMIRLDMSEYMERHT 583
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 584 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 643
Query: 122 KGQTVDLKNTIIIMTSNIGDSVI--------------ARESILGSDQMERGVAEELRRRF 167
KG+TVD KNT++I+TSNIG VI A ES +++ V EEL++ F
Sbjct: 644 KGRTVDFKNTLLILTSNIGSKVIEKGGSGIGFEFSEDASESTY--NRIRSLVNEELKQYF 701
Query: 168 RPEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYN 227
RPEFLNR+DE+IVFRQL+K ++ +I +IMLKE++ RL K + L VT FK +LI+EGY+
Sbjct: 702 RPEFLNRLDEIIVFRQLSKPEVTQIAEIMLKEVFGRLTEKGITLEVTDRFKDRLIQEGYS 761
Query: 228 PSYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
PSYGARPLRRAI RLLED+LAE IL+G I+ GD+ +D D G V
Sbjct: 762 PSYGARPLRRAIMRLLEDSLAEEILSGRIKDGDTALVDVDENGVV 806
>gi|440683788|ref|YP_007158583.1| ATPase AAA-2 domain protein [Anabaena cylindrica PCC 7122]
gi|428680907|gb|AFZ59673.1| ATPase AAA-2 domain protein [Anabaena cylindrica PCC 7122]
Length = 824
Score = 355 bits (912), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 175/283 (61%), Positives = 222/283 (78%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTELA +LA +FGS+EAM+R+DMSEYME+HT
Sbjct: 525 AIRRARVGLKNPNRPIASFVFSGPTGVGKTELAKSLASYFFGSEEAMIRLDMSEYMERHT 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 585 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-ESILGSDQMERG-----------VAEELRRRFRP 169
KG+TVD KNT++I+TSNIG VI + S +G + E V EEL++ FRP
Sbjct: 645 KGRTVDFKNTLLILTSNIGSKVIEKGGSGIGFEFSEDATETQYNRIRSLVNEELKQYFRP 704
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQLNK ++ +I +IMLKE++ RL K + L VT FK +LI EGY+PS
Sbjct: 705 EFLNRLDEIIVFRQLNKAEVTQIAEIMLKEVFGRLTDKGIVLEVTDRFKDRLITEGYSPS 764
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED+LAE IL+G I+ GD+ +D D G V
Sbjct: 765 YGARPLRRAIMRLLEDSLAEEILSGRIKDGDTALVDVDENGVV 807
>gi|209526843|ref|ZP_03275363.1| ATPase AAA-2 domain protein [Arthrospira maxima CS-328]
gi|209492714|gb|EDZ93049.1| ATPase AAA-2 domain protein [Arthrospira maxima CS-328]
Length = 394
Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 170/283 (60%), Positives = 220/283 (77%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL +LA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 96 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKSLAAYFFGSEEAMIRLDMSEFMERHT 155
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 156 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 215
Query: 122 KGQTVDLKNTIIIMTSNIGDSVI------------ARESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT+IIMTSNIG VI ++ +++ V EEL++ FRP
Sbjct: 216 KGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFEENQADAQYNRIRNLVNEELKQYFRP 275
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQLNK ++ EI IML E++ RL K + L +T FK++L+EEGYNPS
Sbjct: 276 EFLNRLDEIIVFRQLNKDEVKEIAVIMLNEVFGRLTEKGIRLEITDRFKERLVEEGYNPS 335
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED+LAE IL+G ++ GD+ +D + G V
Sbjct: 336 YGARPLRRAIMRLLEDSLAEEILSGRVKEGDTAIVDVNEDGQV 378
>gi|326504928|dbj|BAK06755.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 886
Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 172/291 (59%), Positives = 225/291 (77%), Gaps = 13/291 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+R+PNRP++SF+F GPTGVGK+ELA ALA Y+GS+EAMVR+DMSE+ME+HT
Sbjct: 585 AIRRARVGLRNPNRPVASFIFAGPTGVGKSELAKALAASYYGSEEAMVRLDMSEFMERHT 644
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V+K GSPPGYVG+ GGQLTEAVR RP++V+L DEIEKAH DV N+MLQ+++DGR+TD
Sbjct: 645 VAKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLLDEIEKAHPDVFNLMLQIMEDGRLTDS 704
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-ESILGSD-----------QMERGVAEELRRRFRP 169
+G+TVD KNT+IIMTSN+G SVI + LG D +++ V EE+++ FRP
Sbjct: 705 RGRTVDFKNTLIIMTSNVGSSVIEKGGKQLGFDHDDGEARNSYGRIKSLVDEEMKQYFRP 764
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL KM++ EI IML E+ R+ K +EL VT +FK+ ++EEGY+PS
Sbjct: 765 EFLNRLDEMIVFRQLTKMEVKEIAAIMLDEVAGRMRTKGIELLVTESFKELVVEEGYDPS 824
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGN-VIMYRHRN 279
YGARPLRRAI RLLED LA+ +L ++ GD V +D D GN V++ RH +
Sbjct: 825 YGARPLRRAIMRLLEDKLADKMLAEDVKEGDGVIVDADPAGNVVVLSRHSD 875
>gi|427420614|ref|ZP_18910797.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 7375]
gi|425756491|gb|EKU97345.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 7375]
Length = 822
Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 173/287 (60%), Positives = 222/287 (77%), Gaps = 16/287 (5%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 524 AIRRARVGLKNPNRPIASFVFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEFMERHT 583
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 584 VSKLIGSPPGYVGYSEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 643
Query: 122 KGQTVDLKNTIIIMTSNIGDSVI--------------ARESILGSDQMERGVAEELRRRF 167
KG+TVD KNT++I+TSNIG VI A ES +++ V EEL++ F
Sbjct: 644 KGRTVDFKNTLLILTSNIGSKVIEKGGGGLGFELEEDAAES--QYNRIRSLVNEELKQYF 701
Query: 168 RPEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYN 227
RPEFLNR+DE+IVFRQL K ++ EI DI+LKE++ RL + + L VT FK++L+EEGYN
Sbjct: 702 RPEFLNRLDEIIVFRQLTKPEVKEISDILLKEVFGRLTEQGITLEVTDKFKERLVEEGYN 761
Query: 228 PSYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
PSYGARPLRRAI RLLED LAE IL+ ++ GD+ +D D G VI+
Sbjct: 762 PSYGARPLRRAIMRLLEDTLAEEILSSRLRDGDTAVVDVDEKGKVII 808
>gi|428778441|ref|YP_007170227.1| chaperone ATPase [Dactylococcopsis salina PCC 8305]
gi|428692720|gb|AFZ48870.1| ATPase with chaperone activity, ATP-binding subunit
[Dactylococcopsis salina PCC 8305]
Length = 823
Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 171/280 (61%), Positives = 219/280 (78%), Gaps = 12/280 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL +LA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 525 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKSLASYFFGSEEAMIRLDMSEFMERHT 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 585 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARES-----ILGSDQMERG-------VAEELRRRFRP 169
KG+TVD KNT++IMTSNIG VI + L DQ E V EEL++ FRP
Sbjct: 645 KGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFELDQDQAESQYNRIRSLVNEELKQYFRP 704
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQLN+ ++ EI +IML+E++ RL + + L VT F+++L+EEGYNPS
Sbjct: 705 EFLNRLDEIIVFRQLNREEVKEIAEIMLREVFSRLTEQEINLEVTEAFRERLVEEGYNPS 764
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
YGARPLRRAI RLLED LAE IL+G + GD+ T+D G
Sbjct: 765 YGARPLRRAIMRLLEDILAEEILSGRLSEGDTATVDVVEG 804
>gi|86605369|ref|YP_474132.1| Clp protease, ATP-binding subunit ClpC [Synechococcus sp. JA-3-3Ab]
gi|86553911|gb|ABC98869.1| Clp protease, ATP-binding subunit ClpC [Synechococcus sp. JA-3-3Ab]
Length = 824
Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 169/278 (60%), Positives = 218/278 (78%), Gaps = 12/278 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+ AM+R+DMSEYME+HT
Sbjct: 525 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSESAMIRLDMSEYMERHT 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 585 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQILEDGRLTDA 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT+I+MTSNIG VI + + +++ V EEL++ FRP
Sbjct: 645 KGRTVDFKNTLIVMTSNIGSKVIEKGGGSLGFEFNTNDEDANYNRIRNLVHEELKQYFRP 704
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K ++ +I DI+LKE+++R++ K + LTV+ FK L+EEGYNPS
Sbjct: 705 EFLNRVDEIIVFRQLTKEEVKQIADILLKEVFDRMKEKKIYLTVSDRFKDLLVEEGYNPS 764
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
YGARPLRRAI RLLED LAE ILTG+++ G V +D D
Sbjct: 765 YGARPLRRAIQRLLEDILAEEILTGHVKEGSEVLIDVD 802
>gi|222616839|gb|EEE52971.1| hypothetical protein OsJ_35634 [Oryza sativa Japonica Group]
Length = 832
Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 169/291 (58%), Positives = 226/291 (77%), Gaps = 23/291 (7%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++ RARVG+++PNRPI+SF+F GPTGVGK+ELA ALA YFGS+EAM+R+DMSE+ME+HT
Sbjct: 531 SIRRARVGLKNPNRPIASFIFAGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHT 590
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 591 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 650
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSN+G SVI + E +++ V EE+++ FRP
Sbjct: 651 KGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDEKDSSYSRIKSLVVEEMKQYFRP 710
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K+++ EI +IMLKE+++RL+AK+++L VT FK+++++EG+NPS
Sbjct: 711 EFLNRLDEMIVFRQLTKLEVKEIAEIMLKEVFDRLKAKDIDLQVTEKFKERIVDEGFNPS 770
Query: 230 YGARPLRRAIGRLLEDNLAEIILTG-----------YIQVGDSVTMDCDSG 269
YGARPLRRAI RLLED+LAE +L G +I G + ++ SG
Sbjct: 771 YGARPLRRAIMRLLEDSLAEKMLAGEVKRVILPLSMWIPQGKVIELNAQSG 821
>gi|443311631|ref|ZP_21041257.1| ATPase with chaperone activity, ATP-binding subunit [Synechocystis
sp. PCC 7509]
gi|442778360|gb|ELR88627.1| ATPase with chaperone activity, ATP-binding subunit [Synechocystis
sp. PCC 7509]
Length = 829
Score = 355 bits (910), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 172/283 (60%), Positives = 220/283 (77%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL +LA +FGS++AM+R+DMSEYME+HT
Sbjct: 525 AIRRARVGLKNPNRPIASFVFSGPTGVGKTELTKSLAAYFFGSEDAMIRLDMSEYMERHT 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 585 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESI-----LGSDQMERG-------VAEELRRRFRP 169
KG+TVD KNT++I+TSNIG VI + + L D E V EEL++ FRP
Sbjct: 645 KGRTVDFKNTLLILTSNIGSKVIEKGAAGLGFELAQDVAESQYNRIKSLVNEELKQYFRP 704
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL + ++ EI DI+LKE++ RL K + L VT FK +L+EEGYNPS
Sbjct: 705 EFLNRLDEIIVFRQLTRDEVKEIADILLKEVFNRLMEKGITLDVTERFKDRLVEEGYNPS 764
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED+LAE IL+G ++ GD+ +D D G V
Sbjct: 765 YGARPLRRAIMRLLEDSLAEEILSGRVRDGDTALVDVDETGIV 807
>gi|90994524|ref|YP_537014.1| Clp protease ATP binding subunit [Pyropia yezoensis]
gi|122194672|sp|Q1XDF4.1|CLPC_PORYE RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA
homolog
gi|90819088|dbj|BAE92457.1| Clp protease ATP binding subunit [Pyropia yezoensis]
Length = 821
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 167/283 (59%), Positives = 221/283 (78%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+ +M+R+DMSEYME+HT
Sbjct: 527 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALASYFFGSEASMIRLDMSEYMERHT 586
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GG LTEAVR +P++VILFDEIEKAH D+ N++LQ+L+DGR+TD
Sbjct: 587 VSKLIGSPPGYVGYSEGGYLTEAVRKKPYTVILFDEIEKAHPDIFNLLLQILEDGRLTDA 646
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARES-----ILGSDQMERG-------VAEELRRRFRP 169
KG+T+D KNT++IMTSNIG VI + L DQ E V EEL++ FRP
Sbjct: 647 KGRTIDFKNTLLIMTSNIGSKVIEKGGGSLGFELSEDQTESQYTRVRSLVNEELKQYFRP 706
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K ++ EI ++ML E++ R++ ++++L VT FK++L+EEGYNPS
Sbjct: 707 EFLNRLDEIIVFRQLTKDEVREIAELMLNEVFARIKQQDIQLNVTERFKQRLVEEGYNPS 766
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRA+ RLLED+LAE +L+G I+ GDS +D + G V
Sbjct: 767 YGARPLRRAVMRLLEDSLAEEVLSGKIKAGDSAVVDVTNEGEV 809
>gi|334118189|ref|ZP_08492279.1| ATPase AAA-2 domain protein [Microcoleus vaginatus FGP-2]
gi|428317617|ref|YP_007115499.1| ATPase AAA-2 domain protein [Oscillatoria nigro-viridis PCC 7112]
gi|333460174|gb|EGK88784.1| ATPase AAA-2 domain protein [Microcoleus vaginatus FGP-2]
gi|428241297|gb|AFZ07083.1| ATPase AAA-2 domain protein [Oscillatoria nigro-viridis PCC 7112]
Length = 825
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 172/283 (60%), Positives = 220/283 (77%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS++AM+R+DMSEYME+HT
Sbjct: 527 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAGYFFGSEDAMIRLDMSEYMERHT 586
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 587 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 646
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSNIG VI + ++ +++ V EEL+ FRP
Sbjct: 647 KGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFSDNQADANYNRIRSLVNEELKNYFRP 706
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQLNK ++ EI IMLKE++ RL + + L VT FK++L+EEGYNPS
Sbjct: 707 EFLNRLDEIIVFRQLNKEEVKEIAVIMLKEVFGRLTEQGITLEVTEKFKERLVEEGYNPS 766
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED+LAE IL+G I+ GD+ +D G V
Sbjct: 767 YGARPLRRAIMRLLEDSLAEEILSGRIKDGDTAVVDVGEDGIV 809
>gi|170076773|ref|YP_001733411.1| endopeptidase Clp, ATP-binding subunit C [Synechococcus sp. PCC
7002]
gi|169884442|gb|ACA98155.1| endopeptidase Clp, ATP-binding chain C, protease regulatory subunit
[Synechococcus sp. PCC 7002]
Length = 821
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 169/287 (58%), Positives = 223/287 (77%), Gaps = 12/287 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS++AM+R+DMSE+ME+HT
Sbjct: 523 AIRRARVGLKNPNRPIASFVFSGPTGVGKTELTKALAAYFFGSEDAMIRLDMSEFMERHT 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++VILFDEIEKAH D+ N++LQ+L+DGR+TD
Sbjct: 583 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVILFDEIEKAHPDIFNMLLQILEDGRLTDA 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS------------DQMERGVAEELRRRFRP 169
KG+TVD KNT+II+TSNIG VI + +++ V EEL++ FRP
Sbjct: 643 KGRTVDFKNTLIILTSNIGSKVIEKGGGGLGFEFGEDAAESQYNRIRSLVNEELKQYFRP 702
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQLNK ++ EI +I+LK++++RL + +EL VT FK++L+EEGYNPS
Sbjct: 703 EFLNRLDEIIVFRQLNKEEVKEISEILLKDVFKRLTEQEIELQVTDKFKERLVEEGYNPS 762
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYR 276
YGARPLRRAI RLLED LAE IL+G + GD+ +D + G V + +
Sbjct: 763 YGARPLRRAIMRLLEDVLAEEILSGRVGSGDTAIVDINEEGKVAVSK 809
>gi|428775828|ref|YP_007167615.1| ATPase [Halothece sp. PCC 7418]
gi|428690107|gb|AFZ43401.1| ATPase AAA-2 domain protein [Halothece sp. PCC 7418]
Length = 823
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 172/280 (61%), Positives = 219/280 (78%), Gaps = 12/280 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 525 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALATYFFGSEEAMIRLDMSEFMERHT 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 585 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARES-----ILGSDQMERG-------VAEELRRRFRP 169
KG+TVD KNT++IMTSNIG VI + L DQ E V EEL++ FRP
Sbjct: 645 KGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFELDEDQAESQYNRIRSLVNEELKQYFRP 704
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQLN+ ++ EI +IML E++ RL + ++L VT FK++L+EEGY+PS
Sbjct: 705 EFLNRLDEIIVFRQLNREEVKEIAEIMLHEVFSRLTEQEIKLEVTEAFKERLVEEGYSPS 764
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
YGARPLRRAI RLLED LAE IL+G + GD+ T+D G
Sbjct: 765 YGARPLRRAIMRLLEDILAEEILSGRLSEGDTATVDVVEG 804
>gi|376001877|ref|ZP_09779731.1| ATP-dependent Clp protease regulatory subunit [Arthrospira sp. PCC
8005]
gi|423062254|ref|ZP_17051044.1| ATPase AAA-2 [Arthrospira platensis C1]
gi|375329788|emb|CCE15484.1| ATP-dependent Clp protease regulatory subunit [Arthrospira sp. PCC
8005]
gi|406716162|gb|EKD11313.1| ATPase AAA-2 [Arthrospira platensis C1]
Length = 823
Score = 354 bits (909), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 170/283 (60%), Positives = 220/283 (77%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL +LA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 525 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKSLAAYFFGSEEAMIRLDMSEFMERHT 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 585 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVI------------ARESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT+IIMTSNIG VI ++ +++ V EEL++ FRP
Sbjct: 645 KGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFEENQADAQYNRIRNLVNEELKQYFRP 704
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQLNK ++ EI IML E++ RL K + L +T FK++L+EEGYNPS
Sbjct: 705 EFLNRLDEIIVFRQLNKDEVKEIAVIMLNEVFGRLTEKGIRLEITDRFKERLVEEGYNPS 764
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED+LAE IL+G ++ GD+ +D + G V
Sbjct: 765 YGARPLRRAIMRLLEDSLAEEILSGRVKEGDTAIVDVNEDGQV 807
>gi|428770031|ref|YP_007161821.1| ATPase [Cyanobacterium aponinum PCC 10605]
gi|428684310|gb|AFZ53777.1| ATPase AAA-2 domain protein [Cyanobacterium aponinum PCC 10605]
Length = 822
Score = 354 bits (909), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 176/297 (59%), Positives = 222/297 (74%), Gaps = 12/297 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS++AM+R+DMSE+ME+HT
Sbjct: 525 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALATYFFGSEDAMIRLDMSEFMERHT 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 585 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQILEDGRLTDS 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVI-----ARESILGSDQMERG-------VAEELRRRFRP 169
KG+TVD KNT++IMTSNIG VI L DQ E V EEL+ FRP
Sbjct: 645 KGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFELEEDQNESQYNRIRSLVNEELKNYFRP 704
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQLNK ++ EI +I+LKE++ RL + + L VT FK++LIEEG+NP+
Sbjct: 705 EFLNRLDEIIVFRQLNKEEVKEISEILLKEVFARLTEQEITLQVTDKFKERLIEEGFNPA 764
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMTVCA 286
YGARPLRRAI RLLED LAE IL+ +Q GDS +D G VI+ R + A
Sbjct: 765 YGARPLRRAIMRLLEDILAEEILSKRLQEGDSAIVDIGEDGKVIINAQRENPLLAKA 821
>gi|409992273|ref|ZP_11275473.1| ATPase [Arthrospira platensis str. Paraca]
gi|291567174|dbj|BAI89446.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Arthrospira
platensis NIES-39]
gi|409936864|gb|EKN78328.1| ATPase [Arthrospira platensis str. Paraca]
Length = 823
Score = 354 bits (909), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 170/283 (60%), Positives = 220/283 (77%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL +LA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 525 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKSLAAYFFGSEEAMIRLDMSEFMERHT 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 585 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVI------------ARESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT+IIMTSNIG VI ++ +++ V EEL++ FRP
Sbjct: 645 KGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFEENQADAQYNRIRNLVNEELKQYFRP 704
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQLNK ++ EI IML E++ RL K + L +T FK++L+EEGYNPS
Sbjct: 705 EFLNRLDEIIVFRQLNKDEVKEIAVIMLNEVFGRLTEKGIRLEITDRFKERLVEEGYNPS 764
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED+LAE IL+G ++ GD+ +D + G V
Sbjct: 765 YGARPLRRAIMRLLEDSLAEEILSGRVKEGDTAIVDVNEDGQV 807
>gi|172039160|ref|YP_001805661.1| ATP-dependent Clp protease regulatory subunit [Cyanothece sp. ATCC
51142]
gi|354552562|ref|ZP_08971870.1| ATPase AAA-2 domain protein [Cyanothece sp. ATCC 51472]
gi|171700614|gb|ACB53595.1| ATP-dependent Clp protease, regulatory subunit [Cyanothece sp. ATCC
51142]
gi|353555884|gb|EHC25272.1| ATPase AAA-2 domain protein [Cyanothece sp. ATCC 51472]
Length = 822
Score = 354 bits (909), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 173/283 (61%), Positives = 217/283 (76%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAM+R+DMSEYME+HT
Sbjct: 523 AIRRARVGLKNPNRPIASFVFSGPTGVGKTELTKALATYFFGSEEAMIRLDMSEYMERHT 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 583 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESI-----LGSDQMERG-------VAEELRRRFRP 169
KG+TVD KNT++IMTSNIG VI + DQ E V EEL++ FRP
Sbjct: 643 KGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFEDDQNEAQYNRIRNLVNEELKQYFRP 702
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQLNK ++ +I +I+LKE++ RL K + L VT FK++L+EEGYNP+
Sbjct: 703 EFLNRLDEIIVFRQLNKEEVKQISEILLKEVFARLTEKEITLQVTDKFKERLVEEGYNPA 762
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED LAE IL+G + GD +D G V
Sbjct: 763 YGARPLRRAIMRLLEDVLAEEILSGRVGEGDVAVVDIGEDGKV 805
>gi|378787369|gb|AFC40000.1| Clp protease ATP binding subunit [Porphyra umbilicalis]
Length = 821
Score = 354 bits (909), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 167/283 (59%), Positives = 221/283 (78%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+ +M+R+DMSEYME+HT
Sbjct: 527 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALASYFFGSEASMIRLDMSEYMERHT 586
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GG LTEAVR +P++VILFDEIEKAH D+ N++LQ+L+DGR+TD
Sbjct: 587 VSKLIGSPPGYVGYSEGGYLTEAVRKKPYTVILFDEIEKAHPDIFNLLLQILEDGRLTDA 646
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARES-----ILGSDQMERG-------VAEELRRRFRP 169
KG+T+D KNT++IMTSNIG VI + L DQ E V EEL++ FRP
Sbjct: 647 KGRTIDFKNTLLIMTSNIGSKVIEKGGGSLGFELSEDQTESQYTRVRSLVNEELKQYFRP 706
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K ++ EI ++ML E++ R++ ++++L VT FK++L+EEGYNPS
Sbjct: 707 EFLNRLDEIIVFRQLTKDEVREIAELMLNEVFARIKQQDIQLNVTERFKERLVEEGYNPS 766
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRA+ RLLED+LAE +L+G I+ GDS +D + G V
Sbjct: 767 YGARPLRRAVMRLLEDSLAEEVLSGKIKAGDSAVVDVTNEGEV 809
>gi|67920889|ref|ZP_00514408.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal:Clp, N
terminal [Crocosphaera watsonii WH 8501]
gi|67857006|gb|EAM52246.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal:Clp, N
terminal [Crocosphaera watsonii WH 8501]
Length = 823
Score = 354 bits (909), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 173/283 (61%), Positives = 217/283 (76%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL +LA +FGS+EAM+R+DMSEYME+HT
Sbjct: 523 AIRRARVGLKNPNRPIASFVFSGPTGVGKTELTKSLAAYFFGSEEAMIRLDMSEYMERHT 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 583 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESI-----LGSDQMERG-------VAEELRRRFRP 169
KG+TVD KNT++IMTSNIG VI + DQ E V EEL++ FRP
Sbjct: 643 KGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFEDDQNEAQYNRIRNLVNEELKQYFRP 702
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQLNK ++ EI +I+LKE++ RL K + L VT FK++L+EEGYNP+
Sbjct: 703 EFLNRLDEIIVFRQLNKEEVKEISEILLKEVFARLTEKEITLQVTDKFKERLVEEGYNPA 762
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED LAE IL+G + GD +D G V
Sbjct: 763 YGARPLRRAIMRLLEDVLAEEILSGRVGEGDVAVVDIGEDGKV 805
>gi|416380079|ref|ZP_11684027.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Crocosphaera
watsonii WH 0003]
gi|357265734|gb|EHJ14459.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Crocosphaera
watsonii WH 0003]
Length = 809
Score = 354 bits (908), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 173/283 (61%), Positives = 217/283 (76%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL +LA +FGS+EAM+R+DMSEYME+HT
Sbjct: 509 AIRRARVGLKNPNRPIASFVFSGPTGVGKTELTKSLAAYFFGSEEAMIRLDMSEYMERHT 568
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 569 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 628
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESI-----LGSDQMERG-------VAEELRRRFRP 169
KG+TVD KNT++IMTSNIG VI + DQ E V EEL++ FRP
Sbjct: 629 KGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFEDDQNEAQYNRIRNLVNEELKQYFRP 688
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQLNK ++ EI +I+LKE++ RL K + L VT FK++L+EEGYNP+
Sbjct: 689 EFLNRLDEIIVFRQLNKEEVKEISEILLKEVFARLTEKEITLQVTDKFKERLVEEGYNPA 748
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED LAE IL+G + GD +D G V
Sbjct: 749 YGARPLRRAIMRLLEDVLAEEILSGRVGEGDVAVVDIGEDGKV 791
>gi|1168972|sp|P46523.1|CLPA_BRANA RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA
homolog, chloroplastic; Flags: Precursor
gi|406311|emb|CAA53077.1| clpA [Brassica napus]
Length = 874
Score = 354 bits (908), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 170/295 (57%), Positives = 228/295 (77%), Gaps = 11/295 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F GPTGVGK+ELA ALA YFG +EAM+R+DMSE+ME+HT
Sbjct: 569 AIRRARVGLKNPNRPIASFIFFGPTGVGKSELAKALAAYYFGCEEAMIRLDMSEFMERHT 628
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ QLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+T+
Sbjct: 629 VSKLIGSPPGYVGYTEPPQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTNS 688
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-----------ESILGSDQMERGVAEELRRRFRPE 170
KG+TVD KNT++IMTSN+G SVI + E ++++ V +EL++ FRPE
Sbjct: 689 KGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYEKDSSYNRIKSLVTQELKQYFRPE 748
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNR+DE+I+FRQL K+++ EI DI+L+E++ERL+ K +EL VT FK+++++EGYNPSY
Sbjct: 749 FLNRLDEMILFRQLTKLEVKEIADILLQELFERLKKKEVELQVTERFKERVVDEGYNPSY 808
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMTVC 285
GARPLRRAI RLLED++ E +L I+ GDSV +D DS G V + +G+ T
Sbjct: 809 GARPLRRAIMRLLEDSMEEKMLAREIKEGDSVIVDVDSEGKVTVLNGGSGTPTTS 863
>gi|428774264|ref|YP_007166052.1| ATPase [Cyanobacterium stanieri PCC 7202]
gi|428688543|gb|AFZ48403.1| ATPase AAA-2 domain protein [Cyanobacterium stanieri PCC 7202]
Length = 824
Score = 354 bits (908), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 171/290 (58%), Positives = 221/290 (76%), Gaps = 12/290 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+++M+R+DMSEYME+HT
Sbjct: 525 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALATYFFGSEDSMIRLDMSEYMERHT 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 585 VSKLIGSPPGYVGYSEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQILEDGRLTDA 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESI-----LGSDQMERG-------VAEELRRRFRP 169
KG+TVD KNT++IMTSNIG VI + L DQ E V EEL+ FRP
Sbjct: 645 KGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFELEDDQTESQYNRIRSLVNEELKNYFRP 704
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQLNK ++ EI +++LKE++ RL + + L VT FK++L+EEGYNP+
Sbjct: 705 EFLNRLDEIIVFRQLNKEEVKEISELLLKEVFARLTEQEITLQVTDKFKERLVEEGYNPA 764
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRN 279
YGARPLRRAI RLLED LAE IL+ ++ GD+ +D + G V + N
Sbjct: 765 YGARPLRRAIMRLLEDVLAEEILSKRLKEGDTALVDVNEEGKVTIKAEEN 814
>gi|428211805|ref|YP_007084949.1| chaperone ATPase [Oscillatoria acuminata PCC 6304]
gi|428000186|gb|AFY81029.1| ATPase with chaperone activity, ATP-binding subunit [Oscillatoria
acuminata PCC 6304]
Length = 828
Score = 354 bits (908), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 169/287 (58%), Positives = 221/287 (77%), Gaps = 12/287 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAM+R+DMSEYME+HT
Sbjct: 530 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEYMERHT 589
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPG+VG++ GGQLTEAVR RP++VILFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 590 VSKLIGSPPGFVGYDEGGQLTEAVRRRPYTVILFDEIEKAHPDVFNMLLQVLEDGRLTDA 649
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+ VD KNT++IMTSNIG VI + + D++ V EEL+ FRP
Sbjct: 650 KGRVVDFKNTMLIMTSNIGSRVIEKGGGGLGFEFADNRAEAHYDRIRSLVNEELKNYFRP 709
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVF QL K ++ EI +I+L+++ +RL K M L ++ FK++L+EEGYNPS
Sbjct: 710 EFLNRLDEIIVFHQLTKDEVTEIAEILLRDLLKRLVEKQMTLEISDRFKERLVEEGYNPS 769
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYR 276
YGARPLRRAI RLLED+LAE +L+G + GDS +D D G V++ R
Sbjct: 770 YGARPLRRAIMRLLEDHLAEAMLSGKLNEGDSARIDLDEAGEVVVQR 816
>gi|126657032|ref|ZP_01728203.1| ATP-dependent Clp protease regulatory subunit [Cyanothece sp.
CCY0110]
gi|126621575|gb|EAZ92285.1| ATP-dependent Clp protease regulatory subunit [Cyanothece sp.
CCY0110]
Length = 822
Score = 353 bits (907), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 173/283 (61%), Positives = 217/283 (76%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS++AM+R+DMSEYME+HT
Sbjct: 523 AIRRARVGLKNPNRPIASFVFSGPTGVGKTELTKALATYFFGSEDAMIRLDMSEYMERHT 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 583 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESI-----LGSDQMERG-------VAEELRRRFRP 169
KG+TVD KNT++IMTSNIG VI + DQ E V EEL++ FRP
Sbjct: 643 KGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFEDDQNEAQYNRIRNLVNEELKQYFRP 702
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQLNK ++ EI +I+LKE++ RL K + L VT FK++L+EEGYNP+
Sbjct: 703 EFLNRLDEIIVFRQLNKEEVKEISEILLKEVFARLTEKEITLQVTDKFKERLVEEGYNPA 762
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED LAE IL+G + GD +D G V
Sbjct: 763 YGARPLRRAIMRLLEDVLAEEILSGRVGEGDIAVVDIGEDGKV 805
>gi|428309817|ref|YP_007120794.1| chaperone ATPase [Microcoleus sp. PCC 7113]
gi|428251429|gb|AFZ17388.1| ATPase with chaperone activity, ATP-binding subunit [Microcoleus
sp. PCC 7113]
Length = 827
Score = 353 bits (907), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 172/283 (60%), Positives = 220/283 (77%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVGI +PNRPI+SF+F+GPTGVGKTELA +LA +FGS+ AM+R+DMSEYME+HT
Sbjct: 527 AIRRARVGISNPNRPIASFIFSGPTGVGKTELAKSLAAYFFGSESAMIRLDMSEYMERHT 586
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGF GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR++D
Sbjct: 587 VSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQILEDGRLSDT 646
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-ESILGSDQME-------RGVA----EELRRRFRP 169
KG+TVD +NT++IMTSNIG VI + LG D E RG++ EEL+ FRP
Sbjct: 647 KGRTVDFRNTLLIMTSNIGSKVIEKGGGGLGFDWSENQADAQYRGISSLVNEELKAYFRP 706
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL+K ++ +I I+L E++ RL+ + + L VT FK +L+EEGY+PS
Sbjct: 707 EFLNRLDEIIVFRQLSKNEVKQIASILLNEVFSRLKEQGITLEVTERFKDRLVEEGYDPS 766
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED LAE IL+G +Q D+V +D D G +
Sbjct: 767 YGARPLRRAITRLLEDCLAEEILSGRLQEADTVVVDIDDQGQI 809
>gi|86608097|ref|YP_476859.1| Clp protease, ATP-binding subunit ClpC [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86556639|gb|ABD01596.1| Clp protease, ATP-binding subunit ClpC [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 824
Score = 353 bits (907), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 168/278 (60%), Positives = 217/278 (78%), Gaps = 12/278 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+ AM+R+DMSEYME+HT
Sbjct: 525 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSESAMIRLDMSEYMERHT 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 585 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQILEDGRLTDA 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT+I+MTSNIG VI + + +++ V EEL++ FRP
Sbjct: 645 KGRTVDFKNTLIVMTSNIGSKVIEKGGGSLGFEFNTNDEDANYNRIRNLVNEELKQYFRP 704
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K ++ +I DI+LKE+++R+ K + LTV+ FK ++EEGYNPS
Sbjct: 705 EFLNRVDEIIVFRQLTKDEVKQIADILLKEVFDRMTEKKIRLTVSDRFKDLVVEEGYNPS 764
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
YGARPLRRAI RLLED LAE ILTG+++ G V +D D
Sbjct: 765 YGARPLRRAIQRLLEDILAEEILTGHVREGSEVLIDVD 802
>gi|443316093|ref|ZP_21045553.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 6406]
gi|442784324|gb|ELR94204.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 6406]
Length = 823
Score = 353 bits (906), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 173/285 (60%), Positives = 219/285 (76%), Gaps = 12/285 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG++ PNRPI+SF+F+GPTGVGKTELA +LA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 524 AIRRARVGLKSPNRPIASFIFSGPTGVGKTELAKSLAAYFFGSEEAMIRLDMSEFMERHT 583
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++VILFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 584 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVILFDEIEKAHPDVFNMLLQILEDGRLTDA 643
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR---------ESILGSDQMER---GVAEELRRRFRP 169
KG+TVD KN+++IMTSNIG VI + E Q R V EEL++ FRP
Sbjct: 644 KGRTVDFKNSLLIMTSNIGSKVIEKGGGGLGFDFEDNQAESQYNRIRSLVNEELKQYFRP 703
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K ++ I DI+L+EI+ RL + + L VT FK +L+EEGYNPS
Sbjct: 704 EFLNRLDEIIVFRQLTKDEVKSISDILLREIFGRLTEQGITLEVTERFKDRLVEEGYNPS 763
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
YGARPLRRAI RLLED LAE IL+G ++ G + T+D D G V++
Sbjct: 764 YGARPLRRAIMRLLEDTLAEEILSGRLKDGSTATVDVDDQGKVMI 808
>gi|11465798|ref|NP_053942.1| Clp protease ATP binding subunit [Porphyra purpurea]
gi|1705925|sp|P51332.1|CLPC_PORPU RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA
homolog
gi|1276798|gb|AAC08218.1| Clp protease ATP binding subunit (chloroplast) [Porphyra purpurea]
Length = 821
Score = 353 bits (906), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 167/283 (59%), Positives = 221/283 (78%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+ +M+R+DMSEYME+HT
Sbjct: 527 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALASYFFGSEASMIRLDMSEYMERHT 586
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GG LTEAVR +P++VILFDEIEKAH D+ N++LQ+L+DGR+TD
Sbjct: 587 VSKLIGSPPGYVGYSEGGYLTEAVRKKPYTVILFDEIEKAHPDIFNLLLQILEDGRLTDA 646
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARES-----ILGSDQMERG-------VAEELRRRFRP 169
KG+T+D KNT++IMTSNIG VI + L DQ E V EEL++ FRP
Sbjct: 647 KGRTIDFKNTLLIMTSNIGSKVIEKGGGSLGFELSEDQTESQYTRVRSLVNEELKQYFRP 706
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K ++ EI ++ML E++ R++ ++++L VT FK++L+EEGYNPS
Sbjct: 707 EFLNRLDEIIVFRQLTKDEVREIAELMLNEVFARIKQQDIQLNVTERFKERLVEEGYNPS 766
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRA+ RLLED+LAE +L+G I+ GDS +D + G V
Sbjct: 767 YGARPLRRAVMRLLEDSLAEEVLSGKIKAGDSPVVDVTNEGEV 809
>gi|115485055|ref|NP_001067671.1| Os11g0267400 [Oryza sativa Japonica Group]
gi|75269548|sp|Q53LY0.1|CLPC3_ORYSJ RecName: Full=Chaperone protein ClpC3, chloroplastic; AltName:
Full=ATP-dependent Clp protease ATP-binding subunit ClpC
homolog 3; AltName: Full=Casein lytic proteinase C3;
Flags: Precursor
gi|62734176|gb|AAX96285.1| Clp amino terminal domain, putative [Oryza sativa Japonica Group]
gi|77549794|gb|ABA92591.1| ATP-dependent Clp protease ATP-binding subunit clpA
CD4B,chloroplast precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113644893|dbj|BAF28034.1| Os11g0267400 [Oryza sativa Japonica Group]
Length = 932
Score = 353 bits (906), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 171/296 (57%), Positives = 219/296 (73%), Gaps = 19/296 (6%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+RDP RPI+SF+F GPTGVGK+ELA ALA Y+GS EAMVR+DMSE+MEKHT
Sbjct: 631 AIRRARVGLRDPRRPIASFIFAGPTGVGKSELAKALAAYYYGSPEAMVRLDMSEFMEKHT 690
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V+K GSPPGYVG+ GGQLTEA+R RP++V+LFDE+EKAH DV N+MLQ+LDDGR+TD
Sbjct: 691 VAKLVGSPPGYVGYAEGGQLTEAIRRRPYAVVLFDEVEKAHPDVFNMMLQILDDGRLTDS 750
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQM---------------ERGVAEELRRR 166
KG+TVD KN++IIMTSN+G VI + G Q+ + V EE++R
Sbjct: 751 KGRTVDFKNSLIIMTSNVGSGVIEK----GGRQLGFAGDGSGDGGYGVIKNMVEEEMKRY 806
Query: 167 FRPEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGY 226
FRPEFLNR+DE+IVFRQL K+++ EI IML E+ R+ K + L VT FK+ ++E+G+
Sbjct: 807 FRPEFLNRLDEMIVFRQLTKLEVKEIAGIMLAEVTGRIGGKGIGLQVTERFKELVVEQGF 866
Query: 227 NPSYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSM 282
+PSYGARPLRRAI RLLED L + +L G I GDSV +D D GNV++ R+ +
Sbjct: 867 DPSYGARPLRRAIMRLLEDTLTDKMLAGEICAGDSVIVDADGDGNVVVVGRRSAGL 922
>gi|125534026|gb|EAY80574.1| hypothetical protein OsI_35755 [Oryza sativa Indica Group]
Length = 959
Score = 353 bits (905), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 171/296 (57%), Positives = 219/296 (73%), Gaps = 19/296 (6%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+RDP RPI+SF+F GPTGVGK+ELA ALA Y+GS EAMVR+DMSE+MEKHT
Sbjct: 658 AIRRARVGLRDPRRPIASFIFAGPTGVGKSELAKALAAYYYGSPEAMVRLDMSEFMEKHT 717
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V+K GSPPGYVG+ GGQLTEA+R RP++V+LFDE+EKAH DV N+MLQ+LDDGR+TD
Sbjct: 718 VAKLVGSPPGYVGYAEGGQLTEAIRRRPYAVVLFDEVEKAHPDVFNMMLQILDDGRLTDS 777
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQM---------------ERGVAEELRRR 166
KG+TVD KN++IIMTSN+G VI + G Q+ + V EE++R
Sbjct: 778 KGRTVDFKNSLIIMTSNVGSGVIEK----GGRQLGFAGDGSGDGGYGVIKNMVEEEMKRY 833
Query: 167 FRPEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGY 226
FRPEFLNR+DE+IVFRQL K+++ EI IML E+ R+ K + L VT FK+ ++E+G+
Sbjct: 834 FRPEFLNRLDEMIVFRQLTKLEVKEIAGIMLAEVTGRIGGKGIGLQVTERFKELVVEQGF 893
Query: 227 NPSYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSM 282
+PSYGARPLRRAI RLLED L + +L G I GDSV +D D GNV++ R+ +
Sbjct: 894 DPSYGARPLRRAIMRLLEDTLTDKMLAGEICAGDSVIVDADGDGNVVVVGRRSAGL 949
>gi|62734225|gb|AAX96334.1| Clp amino terminal domain, putative [Oryza sativa Japonica Group]
gi|125576822|gb|EAZ18044.1| hypothetical protein OsJ_33590 [Oryza sativa Japonica Group]
Length = 959
Score = 353 bits (905), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 171/296 (57%), Positives = 219/296 (73%), Gaps = 19/296 (6%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+RDP RPI+SF+F GPTGVGK+ELA ALA Y+GS EAMVR+DMSE+MEKHT
Sbjct: 658 AIRRARVGLRDPRRPIASFIFAGPTGVGKSELAKALAAYYYGSPEAMVRLDMSEFMEKHT 717
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V+K GSPPGYVG+ GGQLTEA+R RP++V+LFDE+EKAH DV N+MLQ+LDDGR+TD
Sbjct: 718 VAKLVGSPPGYVGYAEGGQLTEAIRRRPYAVVLFDEVEKAHPDVFNMMLQILDDGRLTDS 777
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQM---------------ERGVAEELRRR 166
KG+TVD KN++IIMTSN+G VI + G Q+ + V EE++R
Sbjct: 778 KGRTVDFKNSLIIMTSNVGSGVIEK----GGRQLGFAGDGSGDGGYGVIKNMVEEEMKRY 833
Query: 167 FRPEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGY 226
FRPEFLNR+DE+IVFRQL K+++ EI IML E+ R+ K + L VT FK+ ++E+G+
Sbjct: 834 FRPEFLNRLDEMIVFRQLTKLEVKEIAGIMLAEVTGRIGGKGIGLQVTERFKELVVEQGF 893
Query: 227 NPSYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSM 282
+PSYGARPLRRAI RLLED L + +L G I GDSV +D D GNV++ R+ +
Sbjct: 894 DPSYGARPLRRAIMRLLEDTLTDKMLAGEICAGDSVIVDADGDGNVVVVGRRSAGL 949
>gi|427717814|ref|YP_007065808.1| ATPase [Calothrix sp. PCC 7507]
gi|427350250|gb|AFY32974.1| ATPase AAA-2 domain protein [Calothrix sp. PCC 7507]
Length = 822
Score = 353 bits (905), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 174/283 (61%), Positives = 220/283 (77%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTELA +LA +FGS+EAM+R+DMSEYME+HT
Sbjct: 524 AIRRARVGLKNPNRPIASFVFSGPTGVGKTELAKSLASYFFGSEEAMIRLDMSEYMERHT 583
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 584 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 643
Query: 122 KGQTVDLKNTIIIMTSNIGDSV-----IARESILGSDQMERG-------VAEELRRRFRP 169
KG+TVD KNT++I+TSNIG V G DQ E V EEL++ FRP
Sbjct: 644 KGRTVDFKNTLLILTSNIGSKVIEKGGGGIGFEFGEDQSESQYNRIKTLVNEELKQYFRP 703
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL+K+++ +I +IMLKE++ RL K + L VT FK++LI EGY+PS
Sbjct: 704 EFLNRLDEIIVFRQLSKVEVTQIAEIMLKEVFGRLTEKGITLEVTDRFKERLITEGYSPS 763
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED+LAE IL+G I+ GD +D D G V
Sbjct: 764 YGARPLRRAIMRLLEDSLAEEILSGRIKDGDIAIVDVDENGIV 806
>gi|428211987|ref|YP_007085131.1| chaperone ATPase [Oscillatoria acuminata PCC 6304]
gi|428000368|gb|AFY81211.1| ATPase with chaperone activity, ATP-binding subunit [Oscillatoria
acuminata PCC 6304]
Length = 822
Score = 352 bits (904), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 172/285 (60%), Positives = 218/285 (76%), Gaps = 12/285 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAM+R+DMSEYME+HT
Sbjct: 524 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALASYFFGSEEAMIRLDMSEYMERHT 583
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 584 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 643
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMERG------------VAEELRRRFRP 169
KG+TVD KNT++IMTSNIG VI + + E+ V EEL+ FRP
Sbjct: 644 KGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFEQNQADAQYNRIRSLVNEELKNYFRP 703
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K ++ I +IMLKE++ RL K + L VT FK++LIEEGYNP+
Sbjct: 704 EFLNRLDEIIVFRQLVKDEVKLISEIMLKEVFSRLTEKGITLEVTDRFKERLIEEGYNPA 763
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
YGARPLRRAI RLLED LAE IL+G ++ G++ +D G VI+
Sbjct: 764 YGARPLRRAIMRLLEDVLAEEILSGRVKEGETALVDIGEEGQVIV 808
>gi|317970390|ref|ZP_07971780.1| ATPase [Synechococcus sp. CB0205]
Length = 850
Score = 352 bits (904), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 170/274 (62%), Positives = 216/274 (78%), Gaps = 13/274 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL +LA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 550 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKSLAAYFFGSEEAMIRLDMSEFMERHT 609
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGF GGQLTEAVR RP++V+LFDEIEKAH DV N++LQLL+DGR+TD
Sbjct: 610 VSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRLTDS 669
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARE------SILGSDQMERG-------VAEELRRRFR 168
KG+TVD KNT+IIMTSNIG VI + G D E V EEL++ FR
Sbjct: 670 KGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGGDAEETNYNRIRSLVNEELKQYFR 729
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNR+DE+IVFRQL++ ++ EI +IMLKE++ R++ K + LTVT FK++L++EGYNP
Sbjct: 730 PEFLNRLDEIIVFRQLSRDEVKEISEIMLKEVFTRMQEKGITLTVTEAFKERLVDEGYNP 789
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSV 262
SYGARPLRRA+ RLLED+LAE L+G I GD+
Sbjct: 790 SYGARPLRRAVMRLLEDSLAEEFLSGRIGEGDTA 823
>gi|443329502|ref|ZP_21058087.1| ATPase with chaperone activity, ATP-binding subunit [Xenococcus sp.
PCC 7305]
gi|442790840|gb|ELS00342.1| ATPase with chaperone activity, ATP-binding subunit [Xenococcus sp.
PCC 7305]
Length = 822
Score = 352 bits (903), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 170/283 (60%), Positives = 220/283 (77%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAM+R+DMSEYME+HT
Sbjct: 525 AIRRARVGLKNPNRPIASFVFSGPTGVGKTELTKALATYFFGSEEAMIRLDMSEYMERHT 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH D+ N++LQ+L+DGR+TD
Sbjct: 585 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDIFNMLLQILEDGRLTDA 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR---------ESILGSDQMER---GVAEELRRRFRP 169
KG+TVD KNT++I+TSNIG VI + E G Q R V EEL+ FRP
Sbjct: 645 KGRTVDFKNTLLILTSNIGSKVIEKGGGGLGFEFEDNAGEAQYNRIKSLVNEELKNYFRP 704
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL+K ++ EI +I+LKE++ RL K ++L VT FK++L++EG+NP+
Sbjct: 705 EFLNRLDEIIVFRQLSKDEVKEIAEILLKEVFTRLTEKEIDLEVTDKFKERLVDEGFNPA 764
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED LAE IL+G + GD+ +D + G V
Sbjct: 765 YGARPLRRAIMRLLEDVLAEEILSGRLGEGDTAVVDVNEEGKV 807
>gi|283794929|ref|YP_003359282.1| Clp protease ATP binding subunit [Cryptomonas paramecium]
gi|253981901|gb|ACT46818.1| Clp protease ATP binding subunit [Cryptomonas paramecium]
Length = 817
Score = 352 bits (903), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 166/281 (59%), Positives = 213/281 (75%), Gaps = 10/281 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAMVR+DMSEYMEKHT
Sbjct: 524 AIKRARVGMKNPNRPIASFIFSGPTGVGKTELTKALASYFFGSEEAMVRLDMSEYMEKHT 583
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
SK GSPPGY+G+ GGQLTEAVR RP++V+LFDEIEK H D+ N++LQ+L+DGR+TD
Sbjct: 584 TSKLIGSPPGYIGYSEGGQLTEAVRRRPYTVVLFDEIEKGHPDIFNLLLQILEDGRLTDS 643
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMERG----------VAEELRRRFRPEF 171
KG+T+D KNT++I+TSN+G + + + LG D E V +EL+ FRPEF
Sbjct: 644 KGRTIDFKNTLLILTSNVGSKSVQKMNGLGFDHKETREAYYAKVKTLVNDELKEYFRPEF 703
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNR+DE+IVFRQL K ++ I DIMLKE++ R+ AK ++L VT FK LI EGYNP YG
Sbjct: 704 LNRLDEIIVFRQLTKNEVGRIADIMLKEVFNRISAKGIQLKVTSRFKDHLINEGYNPVYG 763
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
ARPLRRA+ RLLED L+E L G ++ GD+ MD D G V
Sbjct: 764 ARPLRRAVMRLLEDTLSEEYLAGKVKEGDTAIMDTDRHGKV 804
>gi|427722144|ref|YP_007069421.1| ATPase [Leptolyngbya sp. PCC 7376]
gi|427353864|gb|AFY36587.1| ATPase AAA-2 domain protein [Leptolyngbya sp. PCC 7376]
Length = 820
Score = 352 bits (902), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 166/288 (57%), Positives = 222/288 (77%), Gaps = 12/288 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL +LA +FGS++AM+R+DMSE+ME+HT
Sbjct: 523 AIRRARVGLKNPNRPIASFVFSGPTGVGKTELTKSLAAYFFGSEDAMIRLDMSEFMERHT 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++VILFDEIEKAH D+ N++LQ+L+DGR+TD
Sbjct: 583 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVILFDEIEKAHPDIFNMLLQILEDGRLTDA 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS------------DQMERGVAEELRRRFRP 169
KG+TVD KNT+II+TSNIG VI + +++ V EEL++ FRP
Sbjct: 643 KGRTVDFKNTLIILTSNIGSKVIEKGGGGLGFEFGDDAAESQYNRIRSLVNEELKQYFRP 702
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K ++ EI +I+LK++++RL + +EL VT FK++L+EEGYNP+
Sbjct: 703 EFLNRLDEIIVFRQLTKDEVKEISEILLKDVFQRLTEQEIELQVTEKFKERLVEEGYNPA 762
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRH 277
YGARPLRRAI RLLED LAE IL+G + GD+ +D + G V + +
Sbjct: 763 YGARPLRRAIMRLLEDVLAEEILSGRVSSGDTALVDINEEGKVAVSKE 810
>gi|299890930|gb|ADJ57429.1| clp protease ATP binding subunit [uncultured prymnesiophyte C19847]
Length = 817
Score = 352 bits (902), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 167/283 (59%), Positives = 220/283 (77%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS++AMVR+DMSEYME+HT
Sbjct: 524 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALATYFFGSEDAMVRLDMSEYMERHT 583
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDE+EKAH DV N+MLQ+ +DGR++D
Sbjct: 584 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEVEKAHPDVFNLMLQIFEDGRLSDS 643
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARES-----ILGSDQ-------MERGVAEELRRRFRP 169
KG+T+D KNT++IMTSNIG VI + L DQ ++ V EEL++ FRP
Sbjct: 644 KGRTIDFKNTLLIMTSNIGSKVIEKGGGGLGFELSEDQTSSHYNRIKSLVNEELKQYFRP 703
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K ++ +I +IMLKE+++R+ K ++L VT FK +LI+EGYNP+
Sbjct: 704 EFLNRLDEIIVFRQLTKDEVGQIAEIMLKEVFDRISVKGIQLEVTDRFKTRLIDEGYNPA 763
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRA+ RLLED+LAE +L+ I+ GD+ +D G V
Sbjct: 764 YGARPLRRAVMRLLEDSLAEEVLSEKIKAGDTAVVDVGEDGKV 806
>gi|428201616|ref|YP_007080205.1| chaperone ATPase [Pleurocapsa sp. PCC 7327]
gi|427979048|gb|AFY76648.1| ATPase with chaperone activity, ATP-binding subunit [Pleurocapsa
sp. PCC 7327]
Length = 806
Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 174/299 (58%), Positives = 225/299 (75%), Gaps = 13/299 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG++DPNRPI+SF+F GPTGVGKTELA ALA FGS ++M+R+DMSE+ME HT
Sbjct: 508 AIRRARVGLKDPNRPIASFIFAGPTGVGKTELAKALATYLFGSPDSMIRLDMSEFMESHT 567
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGY+G+E GGQLTEAVR +P++VILFDEIEKAH DV N++LQLLDDGR+TD
Sbjct: 568 VSKLIGSPPGYIGYEEGGQLTEAVRRQPYTVILFDEIEKAHPDVFNMLLQLLDDGRLTDA 627
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESI-----LGSDQME------RG-VAEELRRRFRP 169
KG+TVD KNT++IMTSNIG VI + + D+ E RG V +EL++ FRP
Sbjct: 628 KGRTVDFKNTLVIMTSNIGSKVIEKGGSGFGFEMAEDRAEAAYDRIRGLVNDELKQYFRP 687
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERL-EAKNMELTVTHTFKKKLIEEGYNP 228
EFLNR+D++IVFRQL K ++ +I DI+LKE+ +L E +++ L VT FK +++EGYNP
Sbjct: 688 EFLNRLDDIIVFRQLTKSEVQQIADILLKEVAAQLKEQRDITLEVTEAFKALVVQEGYNP 747
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMTVCAR 287
SYGARPLRRAI RLLED+LAE IL+G I+ GD+ D G V ++ + + V +R
Sbjct: 748 SYGARPLRRAIMRLLEDSLAEAILSGRIKDGDTAIADAGDRGEVKVFASQPLDVVVASR 806
>gi|33865472|ref|NP_897031.1| endopeptidase Clp ATP-binding chain C [Synechococcus sp. WH 8102]
gi|33632641|emb|CAE07453.1| endopeptidase Clp ATP-binding chain C [Synechococcus sp. WH 8102]
Length = 846
Score = 350 bits (899), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 169/272 (62%), Positives = 218/272 (80%), Gaps = 13/272 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 544 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALATYFFGSEEAMIRLDMSEFMERHT 603
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGF GGQLTEAVR RP++V+LFDEIEKAH DV N++LQLL+DGR+TD
Sbjct: 604 VSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRLTDS 663
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-----------ESILGSD--QMERGVAEELRRRFR 168
KG+TVD KNT++IMTSNIG VI + ES S ++ V EEL++ FR
Sbjct: 664 KGRTVDFKNTLVIMTSNIGSKVIEKGGGGLGFEFSGESAEESQYTRIRSLVNEELKQYFR 723
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNR+DE+IVFRQL++ ++ EI +IMLKE++ R+ K + LTV+ FK++L+EEGYNP
Sbjct: 724 PEFLNRLDEIIVFRQLSRDEVKEIAEIMLKEVFGRMGEKGITLTVSDAFKERLVEEGYNP 783
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGD 260
+YGARPLRRA+ RLLED+LAE +L+G I+ GD
Sbjct: 784 AYGARPLRRAVMRLLEDSLAEEVLSGRIKDGD 815
>gi|332706083|ref|ZP_08426155.1| ATPase with chaperone activity, ATP-binding subunit [Moorea
producens 3L]
gi|332355175|gb|EGJ34643.1| ATPase with chaperone activity, ATP-binding subunit [Moorea
producens 3L]
Length = 822
Score = 350 bits (899), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 172/290 (59%), Positives = 221/290 (76%), Gaps = 12/290 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTELA +LA +FGS+EAMVR+DMSEYME+HT
Sbjct: 524 AIRRARVGLKNPNRPIASFVFSGPTGVGKTELAKSLAAYFFGSEEAMVRLDMSEYMERHT 583
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 584 VSKLVGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDS 643
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSNIG VI + ++ +++ V EEL++ FRP
Sbjct: 644 KGRTVDFKNTLLIMTSNIGSKVIEKGGGQLGFEFSDNQAESQYNRIRNLVNEELKQYFRP 703
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K ++ +I I+LKE++ RL + + L V+ FK +LIEEGYNPS
Sbjct: 704 EFLNRLDEIIVFRQLTKEEVKDIAKILLKEVFGRLYEQGITLEVSEKFKDRLIEEGYNPS 763
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRN 279
YGARPLRRAI RLLED LAE IL+ I+ GD +D + G V + R N
Sbjct: 764 YGARPLRRAIMRLLEDVLAEEILSSRIKEGDIAYVDVNEEGKVQVSRKEN 813
>gi|148241887|ref|YP_001227044.1| ATP-dependent Clp protease ATP-binding subunit clpA-like protein
[Synechococcus sp. RCC307]
gi|147850197|emb|CAK27691.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Synechococcus sp. RCC307]
Length = 852
Score = 350 bits (897), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 169/274 (61%), Positives = 215/274 (78%), Gaps = 13/274 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 550 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALASYFFGSEEAMIRLDMSEFMERHT 609
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGF GGQLTEAVR RP++V+LFDEIEKAH DV N++LQLL+DGR+TD
Sbjct: 610 VSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRLTDS 669
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARE------SILGSDQMERG-------VAEELRRRFR 168
KG+TVD KNT+IIMTSNIG VI + G D E V EEL++ FR
Sbjct: 670 KGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGDDAEETQYNRIRSLVNEELKQYFR 729
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNR+DE+IVFRQLN+ ++ I DIML+E++ R++ K + L+VT FK++L+EEGYNP
Sbjct: 730 PEFLNRLDEIIVFRQLNRDEVKLIADIMLREVFNRMKEKGILLSVTEAFKERLVEEGYNP 789
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSV 262
+YGARPLRRA+ RLLED+LAE L G ++ G+S
Sbjct: 790 AYGARPLRRAVMRLLEDSLAEEFLAGRLKEGESA 823
>gi|428303861|ref|YP_007140686.1| ATPase [Crinalium epipsammum PCC 9333]
gi|428245396|gb|AFZ11176.1| ATPase AAA-2 domain protein [Crinalium epipsammum PCC 9333]
Length = 826
Score = 349 bits (895), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 170/283 (60%), Positives = 220/283 (77%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTELA +LA +FGS+EAM+R+DMSEYME+HT
Sbjct: 526 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELAKSLASYFFGSEEAMIRLDMSEYMERHT 585
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++VILFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 586 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVILFDEIEKAHPDVFNMLLQILEDGRLTDA 645
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR----------ESILGS--DQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSNIG VI + E+ S +++ V EEL+ FRP
Sbjct: 646 KGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFSENKTESQYNRIRSLVNEELKNYFRP 705
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVF QL + ++ EI DIMLKE+++RL + M L VT FK +L++EGY+P+
Sbjct: 706 EFLNRLDEIIVFHQLTRDEVKEIADIMLKELFKRLNDQGMSLEVTERFKDRLVQEGYSPA 765
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED LAE IL+G ++ G++ +D G V
Sbjct: 766 YGARPLRRAIMRLLEDVLAEEILSGRLKDGNAAVVDVGEDGQV 808
>gi|354564772|ref|ZP_08983948.1| ATPase AAA-2 domain protein [Fischerella sp. JSC-11]
gi|353549898|gb|EHC19337.1| ATPase AAA-2 domain protein [Fischerella sp. JSC-11]
Length = 820
Score = 349 bits (895), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 166/283 (58%), Positives = 219/283 (77%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTELA +LA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 522 AIRRARVGLKNPNRPIASFVFSGPTGVGKTELAKSLAAYFFGSEEAMIRLDMSEFMERHT 581
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG++ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+LDDG +TD
Sbjct: 582 VSKLIGSPPGYVGYDEGGQLTEAVRRRPYTVLLFDEIEKAHPDVFNMLLQILDDGHLTDA 641
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+ VD KNT+II+TSNIG VI + E+ +++ V EE++ FRP
Sbjct: 642 KGRKVDFKNTLIILTSNIGSRVIEKGGGGLGFQFSEDEAEASYNRIRNLVNEEMKNYFRP 701
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVF QL K ++ +I +IMLKE+ +RL K + L V+ FK+++++EGYNPS
Sbjct: 702 EFLNRLDEIIVFTQLKKEEVKQIAEIMLKEVADRLTEKGITLEVSDRFKERVLQEGYNPS 761
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED+LAE +L+G I GD+ +D D G V
Sbjct: 762 YGARPLRRAIMRLLEDSLAEALLSGQITDGDTAIVDVDDDGQV 804
>gi|334117325|ref|ZP_08491417.1| ATPase AAA-2 domain protein [Microcoleus vaginatus FGP-2]
gi|333462145|gb|EGK90750.1| ATPase AAA-2 domain protein [Microcoleus vaginatus FGP-2]
Length = 822
Score = 349 bits (895), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 170/283 (60%), Positives = 218/283 (77%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 521 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALATYFFGSEEAMIRLDMSEFMERHT 580
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG++ GGQLTEAVR RP++VILFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 581 VSKLIGSPPGYVGYDEGGQLTEAVRRRPYTVILFDEIEKAHPDVFNMMLQILEDGRLTDA 640
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-ESILGSDQMERG-----------VAEELRRRFRP 169
KG+TVD KNT++IMTSNIG VI + LG + E V EEL++ FRP
Sbjct: 641 KGRTVDFKNTLLIMTSNIGSRVIEKGGGGLGFEFAESAADGQYNRVRSLVNEELKQVFRP 700
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EF+NR+DE+IVFRQLN+ ++ +I DIML++++ RL + + L+VT FK L+ EGYNPS
Sbjct: 701 EFINRLDEIIVFRQLNREEVKQIADIMLQQVFSRLTEQGITLSVTDRFKDLLVTEGYNPS 760
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED LAE +L+G ++ G +D D G V
Sbjct: 761 YGARPLRRAIMRLLEDVLAEEMLSGKLKDGQKAIVDVDENGQV 803
>gi|332710153|ref|ZP_08430106.1| ATPase with chaperone activity, ATP-binding subunit [Moorea
producens 3L]
gi|332351111|gb|EGJ30698.1| ATPase with chaperone activity, ATP-binding subunit [Moorea
producens 3L]
Length = 795
Score = 349 bits (895), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 169/285 (59%), Positives = 216/285 (75%), Gaps = 12/285 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG++DPNRPI+SF+F+GPTGVGKTELA +LA FGS++ M+R+DMSEYME+HT
Sbjct: 495 AIRRARVGLKDPNRPIASFIFSGPTGVGKTELAKSLASYLFGSEDKMIRLDMSEYMERHT 554
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPG+VG++ GGQLTEAVR +P+SV+LFDEIEKAH DV NV+LQLLDDGR+TD
Sbjct: 555 VSKLIGSPPGFVGYDEGGQLTEAVRRQPYSVVLFDEIEKAHPDVFNVLLQLLDDGRLTDA 614
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-ESILG-----------SDQMERGVAEELRRRFRP 169
+G+TVD KNTI+IMTSNIG VI + S+ G +Q+ V E L+ FRP
Sbjct: 615 RGRTVDFKNTILIMTSNIGSKVIEKGGSVFGFESSKTYEESRYNQIRTQVNENLKDYFRP 674
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+D++IVFRQL K ++ EI +I+L+EI ++ K + L VT FK L++ GY PS
Sbjct: 675 EFLNRLDDIIVFRQLKKNEVKEIAEILLQEISSSIQEKGIILEVTEAFKDHLVKAGYEPS 734
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
YGARPLRRAI LLED+LAE +L+G IQ GD+ +D D G V +
Sbjct: 735 YGARPLRRAIMSLLEDSLAEAMLSGQIQEGDTAVVDVDDHGQVTV 779
>gi|4105131|gb|AAD02267.1| ClpC protease [Spinacia oleracea]
Length = 891
Score = 348 bits (894), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 164/264 (62%), Positives = 213/264 (80%), Gaps = 12/264 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGK+ELA ALA YFGS+EAM+R+DMSE+ME+HT
Sbjct: 620 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHT 679
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 680 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 739
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+T D KNT++IMTSN+G SVI + E ++++ V EEL++ FRP
Sbjct: 740 KGRTADFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRP 799
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K+++ EI DIMLKE++ RL+ K +EL VT F+ ++++EGYNPS
Sbjct: 800 EFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFGRLKNKEIELQVTERFRDRVVDEGYNPS 859
Query: 230 YGARPLRRAIGRLLEDNLAEIILT 253
YGARPLRRAI RLLED++AE +L
Sbjct: 860 YGARPLRRAIMRLLEDSMAEKMLA 883
>gi|37521633|ref|NP_925010.1| endopeptidase Clp ATP-binding chain [Gloeobacter violaceus PCC
7421]
gi|35212631|dbj|BAC90005.1| endopeptidase Clp ATP-binding chain [Gloeobacter violaceus PCC
7421]
Length = 819
Score = 348 bits (894), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 166/282 (58%), Positives = 220/282 (78%), Gaps = 12/282 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++P RPI+SF+F+GPTGVGKTELA +LA +FGS++AM+R+DMSEYME+HT
Sbjct: 523 AIRRARVGLKNPKRPIASFIFSGPTGVGKTELAKSLATYFFGSEDAMIRLDMSEYMERHT 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++VILFDEIEKAH DV NV+LQ+L+DGR+TD
Sbjct: 583 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVILFDEIEKAHPDVFNVLLQILEDGRLTDA 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARE------SILGSDQMERG------VAEELRRRFRP 169
KG+TVD KNT++IMTSN+G VI + + G+++ +R V EEL++ FRP
Sbjct: 643 KGRTVDFKNTLMIMTSNVGSKVIEKGGGGLGFNTAGTEEEQRYNRISELVKEELKQYFRP 702
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVF L + ++ +I IML+E++ RLE +NM++ +T F +KLIEEGY+ +
Sbjct: 703 EFLNRLDEIIVFHPLTREEVKQIAVIMLREVFARLEEQNMKIEITDAFNRKLIEEGYSAT 762
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGN 271
YGARPLRRAI R+LED LAE IL ++ GD+V +D DS G
Sbjct: 763 YGARPLRRAIQRMLEDQLAEEILAARLKEGDTVLVDVDSDGK 804
>gi|428319462|ref|YP_007117344.1| ATPase AAA-2 domain protein [Oscillatoria nigro-viridis PCC 7112]
gi|428243142|gb|AFZ08928.1| ATPase AAA-2 domain protein [Oscillatoria nigro-viridis PCC 7112]
Length = 822
Score = 348 bits (893), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 169/283 (59%), Positives = 218/283 (77%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 521 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALATYFFGSEEAMIRLDMSEFMERHT 580
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG++ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 581 VSKLIGSPPGYVGYDEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDA 640
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-ESILGSDQMERG-----------VAEELRRRFRP 169
KG+TVD KNT++IMTSNIG VI + LG + E V EEL++ FRP
Sbjct: 641 KGRTVDFKNTLLIMTSNIGSRVIEKGGGGLGFEFAESAADGQYNRVRSLVNEELKQFFRP 700
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EF+NR+DE+IVFRQLN+ ++ +I DIML++++ RL + + L+VT FK L+ EGYNPS
Sbjct: 701 EFINRLDEIIVFRQLNREEVKQIADIMLQQVFSRLTEQGITLSVTERFKDLLVTEGYNPS 760
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED LAE +L+G ++ G +D D G V
Sbjct: 761 YGARPLRRAIMRLLEDVLAEEMLSGKLKDGQKAIVDVDENGQV 803
>gi|443309789|ref|ZP_21039475.1| ATPase with chaperone activity, ATP-binding subunit [Synechocystis
sp. PCC 7509]
gi|442780161|gb|ELR90368.1| ATPase with chaperone activity, ATP-binding subunit [Synechocystis
sp. PCC 7509]
Length = 822
Score = 348 bits (892), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 171/297 (57%), Positives = 223/297 (75%), Gaps = 13/297 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG++ P+RPI+SF+F+GPTGVGKTEL+ ALA +FGS+EAM+R+DMSEYME+HT
Sbjct: 525 AIRRARVGLKSPDRPIASFIFSGPTGVGKTELSKALAAYFFGSEEAMIRLDMSEYMERHT 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG++ GGQLTEAVR +P+SVILFDEIEKAH DV N++LQLLDDGR+TD
Sbjct: 585 VSKLIGSPPGYVGYDEGGQLTEAVRRKPYSVILFDEIEKAHSDVFNLLLQLLDDGRLTDA 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-ESILGSDQMERG-----------VAEELRRRFRP 169
+G+TVD KNT+IIMTSNIG VI + +G + + G V EEL+ FRP
Sbjct: 645 QGRTVDFKNTLIIMTSNIGSKVIEKGGGGIGFEFADNGAETQYNRIKTLVNEELKNYFRP 704
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE IVF QL K ++ +I DI+L E+ RL + M L VT +FK+ ++E+GY+PS
Sbjct: 705 EFLNRLDETIVFTQLKKTEIKQIADILLLEVANRLAEQGMTLEVTDSFKELVVEQGYSPS 764
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMTVCA 286
YGARPLRRAI LLED+LAE +LTG I++GD+ +D GG V + + + + +
Sbjct: 765 YGARPLRRAIMSLLEDSLAEAMLTGQIKLGDNAIVDV-IGGEVKVTKSEKPELVLAS 820
>gi|113476893|ref|YP_722954.1| ATPase [Trichodesmium erythraeum IMS101]
gi|110167941|gb|ABG52481.1| ATPase AAA-2 [Trichodesmium erythraeum IMS101]
Length = 825
Score = 348 bits (892), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 170/278 (61%), Positives = 216/278 (77%), Gaps = 12/278 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
L RARVG+++P RPI+SF+F+GPTGVGKTEL ALA +FGS+EAM+R+DMSEYME+HT
Sbjct: 523 ALRRARVGLKNPKRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEYMERHT 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPG+VG++ GGQLTEAVR RP++V+LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 583 VSKLVGSPPGFVGYDEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNIMLQVLEDGRLTDS 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARES-----ILGSDQMERG-------VAEELRRRFRP 169
KG+ VD KNT+IIMTSNIG VI + D+ E V EEL++ FRP
Sbjct: 643 KGRVVDFKNTLIIMTSNIGSQVIEKGGGGLGFEFAEDKEEAQYNRIRNLVNEELKQYFRP 702
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K ++ EI +IML+E++ RL + + LTV+ FK +LIE+G++PS
Sbjct: 703 EFLNRLDEIIVFRQLTKDEVKEIAEIMLREVFSRLGDREITLTVSDKFKDRLIEDGFDPS 762
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
YGARPLRRAI RLLED LAE +L G IQ G++V +D D
Sbjct: 763 YGARPLRRAIMRLLEDVLAEALLAGKIQDGENVYVDLD 800
>gi|374249468|ref|YP_005088687.1| clpC gene product [Phaeocystis antarctica]
gi|340008159|gb|AEK26791.1| Clp protease ATP binding subunit [Phaeocystis antarctica]
Length = 830
Score = 347 bits (891), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 162/286 (56%), Positives = 222/286 (77%), Gaps = 12/286 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F GPTGVGKTEL ALA +FGS++AMVR+DMSEYME+HT
Sbjct: 529 AIRRARVGLKNPNRPIASFIFAGPTGVGKTELTKALASYFFGSEDAMVRLDMSEYMERHT 588
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG++ GGQLTEAVR RP++V+LFDE+EKAH+DV N++LQ+ +DGR+TD
Sbjct: 589 VSKLIGSPPGYVGYDQGGQLTEAVRRRPYTVVLFDEVEKAHQDVFNLLLQIFEDGRLTDS 648
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
+G+T+D K+T++I+TSNIG VI + E+ ++++ V EEL++ FRP
Sbjct: 649 RGRTIDFKSTLLILTSNIGSKVIEKGGGGLGFELSEDETEFQYNRIQALVNEELKQYFRP 708
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K ++ +I ++MLKE++ R+ AK ++L VT F+ L++EGYNP+
Sbjct: 709 EFLNRLDEIIVFRQLTKNEVGQISELMLKEVFSRIAAKGIQLEVTERFRVHLVDEGYNPT 768
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMY 275
YGARPLRRAI RLLEDNLAE +L+ I+ GD +D D V ++
Sbjct: 769 YGARPLRRAIMRLLEDNLAEEVLSEKIKTGDIAVVDIDIDNKVKIF 814
>gi|303288740|ref|XP_003063658.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454726|gb|EEH52031.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 839
Score = 347 bits (890), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 165/285 (57%), Positives = 220/285 (77%), Gaps = 12/285 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G+++PNRP++SF+F+GPTGVGK+ELA +++ YFGS++AMVR+DMSE+ME+HT
Sbjct: 535 AIRRARTGLKNPNRPVASFIFSGPTGVGKSELAKSISQFYFGSEDAMVRLDMSEFMERHT 594
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++++LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 595 VSKLIGSPPGYVGYSEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDS 654
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARES-----ILGSDQMERG-------VAEELRRRFRP 169
KG+ VD KNT+IIMTSN+G SVI + L D + V EEL+ FRP
Sbjct: 655 KGRVVDFKNTLIIMTSNVGSSVIEKGGGGLGFQLNDDAEDTSYQRIKTLVNEELKNYFRP 714
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQLNK ++ EI IML+++++RL+ K++ L VT FK +L++EG+NP+
Sbjct: 715 EFLNRLDEIIVFRQLNKNEVREIAAIMLEQVFKRLKEKDITLDVTDRFKDRLVDEGFNPT 774
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
YGARPLRRA+ RLLEDNLAE +L G I G S MD ++ G + +
Sbjct: 775 YGARPLRRAVMRLLEDNLAEKMLNGDIGEGSSCIMDVNAAGEITV 819
>gi|456062009|ref|YP_007476253.1| Clp protease ATP binding subunit (chloroplast) [Pavlova lutheri]
gi|449327196|gb|AGE93752.1| Clp protease ATP binding subunit (chloroplast) [Pavlova lutheri]
Length = 845
Score = 347 bits (889), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 169/295 (57%), Positives = 221/295 (74%), Gaps = 16/295 (5%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS E+MVR+DMSEYME+HT
Sbjct: 530 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALASYFFGSVESMVRLDMSEYMERHT 589
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP+SV+LFDEIEKAH DV N++LQ+ +DGR+TD
Sbjct: 590 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYSVVLFDEIEKAHPDVFNLLLQIFEDGRLTDS 649
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARES-----ILGSDQMERG-------VAEELRRRFRP 169
KG+T+D KNT++I+TSNIG VI + DQ E V EEL++ FRP
Sbjct: 650 KGRTIDFKNTLLILTSNIGSKVIEKSGGDLGFEFSQDQSESEYNRIKVLVNEELKQYFRP 709
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K Q+ +I DIML E++ER+ K + + +T FK+K+I G+NPS
Sbjct: 710 EFLNRLDEIIVFRQLTKDQVGQIADIMLAEVFERISKKGISVEITDKFKEKVINSGFNPS 769
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDC-DSGGNVIMYRHRNGSMT 283
YGARPLRRA+ L+ED LAE +L+ I GDS+ +D D G +V++ +N S++
Sbjct: 770 YGARPLRRAVQSLIEDVLAEEVLSARIVSGDSIVIDAKDDGTSVVL---KNDSLS 821
>gi|428309114|ref|YP_007120091.1| chaperone ATPase [Microcoleus sp. PCC 7113]
gi|428250726|gb|AFZ16685.1| ATPase with chaperone activity, ATP-binding subunit [Microcoleus
sp. PCC 7113]
Length = 827
Score = 347 bits (889), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 170/284 (59%), Positives = 220/284 (77%), Gaps = 14/284 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTELA ALA +FGS+EAM+R+DMSE+ME HT
Sbjct: 529 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELAKALAAYFFGSEEAMIRLDMSEFMESHT 588
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG++ GGQLTEAVR +P++V+LFDEIEKAH DV N++LQLLDDGR+TD
Sbjct: 589 VSKLIGSPPGYVGYDEGGQLTEAVRRKPYTVLLFDEIEKAHPDVFNMLLQLLDDGRLTDA 648
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-------ESILGSDQMER------GVAEELRRRFR 168
+G+TVD KNT+IIMTSNIG VI + ES G++ R V E+L+ FR
Sbjct: 649 QGRTVDFKNTLIIMTSNIGSKVIEKGGSSFGFESS-GNEAESRYLRIRDKVNEDLKGYFR 707
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNR+DE+IVFRQL + ++ +I D+ML++I RL + + L VT FK +L++EGY+P
Sbjct: 708 PEFLNRLDEIIVFRQLTRDEVKQIADLMLRDISIRLLEQGIALEVTGRFKDRLVDEGYDP 767
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
SYGARPLRRAI RLLED+LAE +L+G + GD+ +D D G V
Sbjct: 768 SYGARPLRRAIMRLLEDSLAEAMLSGQVNDGDTAVIDVDDKGQV 811
>gi|255087254|ref|XP_002505550.1| predicted protein [Micromonas sp. RCC299]
gi|226520820|gb|ACO66808.1| predicted protein [Micromonas sp. RCC299]
Length = 886
Score = 347 bits (889), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 163/285 (57%), Positives = 221/285 (77%), Gaps = 12/285 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G+++PNRP++SF+F+GPTGVGK+ELA +++ YFGS++AMVR+DMSE+ME+HT
Sbjct: 582 AIRRARTGLKNPNRPVASFIFSGPTGVGKSELAKSISSFYFGSEDAMVRLDMSEFMERHT 641
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++++LFDE+EKAH DV N+MLQ+L+DGR+TD
Sbjct: 642 VSKLIGSPPGYVGYSEGGQLTEAVRRRPYTLVLFDEVEKAHPDVFNMMLQILEDGRLTDS 701
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARES-----ILGSD-------QMERGVAEELRRRFRP 169
KG+ VD KNT+II+TSN+G SVI + L D ++++ V EEL+ FRP
Sbjct: 702 KGRVVDFKNTLIILTSNVGSSVIEKGGGGLGFQLNDDAEDTSYQRIKQLVNEELKNYFRP 761
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQLNK ++ EI IML ++++RL+ K + L VT FK +L++EG+NP+
Sbjct: 762 EFLNRLDEIIVFRQLNKNEVREIAQIMLNQVFKRLKEKEITLDVTDRFKDRLVDEGFNPT 821
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
YGARPLRRA+ RLLEDNLAE +L G I G S MD ++ G + +
Sbjct: 822 YGARPLRRAVMRLLEDNLAEKMLNGDISEGSSCIMDVNAAGEITV 866
>gi|116073045|ref|ZP_01470307.1| ATPase [Synechococcus sp. RS9916]
gi|116068350|gb|EAU74102.1| ATPase [Synechococcus sp. RS9916]
Length = 859
Score = 346 bits (888), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 165/268 (61%), Positives = 213/268 (79%), Gaps = 13/268 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 556 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALATYFFGSEEAMIRLDMSEFMERHT 615
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGF GGQLTEAVR RP++V+LFDEIEKAH DV N++LQLL+DGR+TD
Sbjct: 616 VSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRLTDS 675
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARES------ILGSDQMERG-------VAEELRRRFR 168
KG+TVD KNT++IMTSNIG VI + G + E V EEL++ FR
Sbjct: 676 KGRTVDFKNTLVIMTSNIGSKVIEKGGGGLGFEFSGENAEENQYNRIRSLVNEELKQYFR 735
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNR+DE+IVFRQLN+ ++ +I DIML+E++ R+ K + LTV+ FK++L+EEG+NP
Sbjct: 736 PEFLNRLDEIIVFRQLNRDEVKQIADIMLREVFSRIGEKGITLTVSEAFKERLVEEGFNP 795
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYI 256
+YGARPLRRA+ RLLED+LAE +L+G I
Sbjct: 796 AYGARPLRRAVMRLLEDSLAEEVLSGRI 823
>gi|75910545|ref|YP_324841.1| UvrB/UvrC protein [Anabaena variabilis ATCC 29413]
gi|75704270|gb|ABA23946.1| UvrB/UvrC protein [Anabaena variabilis ATCC 29413]
Length = 814
Score = 346 bits (887), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 165/286 (57%), Positives = 218/286 (76%), Gaps = 11/286 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG++ PNRPI+SF+F+GPTGVGKTELA ALA +FG+++AM+R+DMSEYME HT
Sbjct: 517 AIRRARVGLKSPNRPIASFIFSGPTGVGKTELAKALAAYFFGAEDAMIRLDMSEYMESHT 576
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG++ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+LDDG +TD
Sbjct: 577 VSKLIGSPPGYVGYDEGGQLTEAVRRRPYTVLLFDEIEKAHPDVFNMLLQILDDGHITDA 636
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-----------ESILGSDQMERGVAEELRRRFRPE 170
KG+ VD KNT+II+TSNIG VI + ++ +++ V EEL+ FRPE
Sbjct: 637 KGRKVDFKNTLIILTSNIGSKVIEKGGGGLGFEFDNQAEASYNRIRNLVNEELKNYFRPE 696
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNR+DEVIVF QL++ ++ +I DIML+++ RL K + L VT FK+ ++ EGYNPSY
Sbjct: 697 FLNRLDEVIVFTQLSRDEVKQIADIMLRDVASRLTEKGITLEVTERFKELVVTEGYNPSY 756
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYR 276
GARPLRRAI RLLED+LAE++L+G I GD+ D + G V +++
Sbjct: 757 GARPLRRAIMRLLEDSLAEVLLSGEITEGDTAIADVNDDGQVQIHK 802
>gi|428305782|ref|YP_007142607.1| ATPase [Crinalium epipsammum PCC 9333]
gi|428247317|gb|AFZ13097.1| ATPase AAA-2 domain protein [Crinalium epipsammum PCC 9333]
Length = 815
Score = 346 bits (887), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 169/296 (57%), Positives = 220/296 (74%), Gaps = 12/296 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG++ PNRPI+SF+F+GPTGVGKTELA ALA +FGS+EAM+R+DMSEYME HT
Sbjct: 520 AIRRARVGLKSPNRPIASFIFSGPTGVGKTELAKALAAHFFGSEEAMIRVDMSEYMESHT 579
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPG+VG++ GGQLTEAVR RP+SVILFDEIEKAH DV N+MLQ+LDDGR+TD
Sbjct: 580 VSKLIGSPPGFVGYDEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNMMLQMLDDGRLTDA 639
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-ESILG----SDQ-------MERGVAEELRRRFRP 169
+G+TVD KNT+II+TSN+G VI + S LG DQ M++ V EEL+ FRP
Sbjct: 640 QGRTVDFKNTLIILTSNLGSKVIEKGGSGLGFEFSEDQAEATYNRMQQRVQEELKAYFRP 699
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+D++IVFRQL ++ I IML+E+ RL + + L VT FK ++++EG+NP
Sbjct: 700 EFLNRLDDIIVFRQLTFEEVRSIAGIMLREVASRLTEQEISLEVTDKFKDRVVKEGFNPK 759
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMTVC 285
+GAR LRRAI RLLED+LAE +L+G + GD+ +D G V + R + + +
Sbjct: 760 FGARELRRAIMRLLEDSLAEAMLSGTVNSGDTAVIDVGEDGEVEIKRMQRQELVIV 815
>gi|414079572|ref|YP_007000996.1| ATP-dependent Clp protease [Anabaena sp. 90]
gi|413972851|gb|AFW96939.1| ATP-dependent Clp protease [Anabaena sp. 90]
Length = 816
Score = 345 bits (885), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 168/282 (59%), Positives = 216/282 (76%), Gaps = 11/282 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG++ PNRPI+SF+F+GPTGVGKTELA ALA +FG +E+MVR+DMSEYME H
Sbjct: 519 AIRRARVGLKSPNRPIASFIFSGPTGVGKTELAKALAAYFFGDEESMVRLDMSEYMESHN 578
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG++ GGQLTEAVR +P++V+LFDEIEKAH DV N++LQ+LDDG +TD
Sbjct: 579 VSKLIGSPPGYVGYDEGGQLTEAVRRKPYTVLLFDEIEKAHPDVFNMLLQILDDGHLTDA 638
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-ESILGSD----------QMERGVAEELRRRFRPE 170
KG+ VD KNT+II+TSNIG VI + S LG + ++ V EEL+ FRPE
Sbjct: 639 KGRKVDFKNTLIILTSNIGSKVIEKGGSSLGFEFDNAAEASYHRIRNLVNEELKAYFRPE 698
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNR+D++IVF QLNK ++ +I +IML+++ RL+ KN+ L VT FK+K+++EGY+PSY
Sbjct: 699 FLNRVDDIIVFTQLNKDEVKQIAEIMLRDVGSRLKEKNITLEVTEAFKEKVVQEGYDPSY 758
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
GARPLRRAI RLLED+L E IL+G I GD +D D G V
Sbjct: 759 GARPLRRAIVRLLEDSLVEAILSGEIADGDKAIVDVDDDGQV 800
>gi|16331384|ref|NP_442112.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803]
gi|383323125|ref|YP_005383978.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803 substr. GT-I]
gi|383326294|ref|YP_005387147.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803 substr. PCC-P]
gi|383492178|ref|YP_005409854.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803 substr. PCC-N]
gi|384437446|ref|YP_005652170.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803]
gi|451815537|ref|YP_007451989.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803]
gi|1001555|dbj|BAA10182.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803]
gi|339274478|dbj|BAK50965.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803]
gi|359272444|dbj|BAL29963.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803 substr. GT-I]
gi|359275614|dbj|BAL33132.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803 substr. PCC-N]
gi|359278784|dbj|BAL36301.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803 substr. PCC-P]
gi|407961235|dbj|BAM54475.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803]
gi|451781506|gb|AGF52475.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803]
Length = 821
Score = 345 bits (885), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 166/285 (58%), Positives = 217/285 (76%), Gaps = 12/285 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 523 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEFMERHT 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH D+ N++LQ+L+DGR+TD
Sbjct: 583 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDIFNMLLQILEDGRLTDA 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARES-----ILGSDQMERG-------VAEELRRRFRP 169
KG+TVD KNT++IMTSNIG VI + DQ E V EEL+ FRP
Sbjct: 643 KGRTVDFKNTLLIMTSNIGSKVIEKGGGGLGFDFADDQAESQYNRIRSLVNEELKNYFRP 702
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQLNK ++ EI +I+L++++ RL K + L VT FK++++EEG+NP+
Sbjct: 703 EFLNRLDEIIVFRQLNKEEVKEISEILLRDVFARLVEKEISLQVTDKFKERIVEEGFNPA 762
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
YGARPLRRAI RLLED LAE IL+G ++ G +D V++
Sbjct: 763 YGARPLRRAIMRLLEDVLAEEILSGRLKEGSQALVDIGEDNQVVV 807
>gi|282898552|ref|ZP_06306540.1| UvrB/UvrC protein [Cylindrospermopsis raciborskii CS-505]
gi|281196420|gb|EFA71329.1| UvrB/UvrC protein [Cylindrospermopsis raciborskii CS-505]
Length = 817
Score = 345 bits (885), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 165/282 (58%), Positives = 217/282 (76%), Gaps = 11/282 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+L RARVG++ PNRPI+SF+F+GPTGVGKTELA ALA +FG++++M+R+DMSEYME H
Sbjct: 519 SLRRARVGLKSPNRPIASFIFSGPTGVGKTELAKALATYFFGAEDSMIRLDMSEYMESHN 578
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG++ GGQLTEAVR +P++++LFDEIEKAH DV N++LQ+LDDG +TD
Sbjct: 579 VSKLIGSPPGYVGYDEGGQLTEAVRRKPYTLLLFDEIEKAHPDVFNMLLQILDDGHLTDA 638
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-----------ESILGSDQMERGVAEELRRRFRPE 170
KG+ VD KNT+II+TSNIG VI + ++ +++ V EEL+ FRPE
Sbjct: 639 KGRKVDFKNTLIILTSNIGSKVIEKGGMSLGFEFDNQANASYNRIRNLVNEELKSYFRPE 698
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNR+DE+IVF QLNK ++ EI IML+E+ +RL+ K ++L VT FK ++ EGY+PSY
Sbjct: 699 FLNRVDEIIVFSQLNKDEVKEISQIMLEEVAKRLQEKGIKLEVTEAFKDLVVTEGYDPSY 758
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
GARPLRRAI RLLED+LAE+IL+G I+ GD +D D G V
Sbjct: 759 GARPLRRAIMRLLEDSLAEVILSGEIREGDQAIVDVDDDGLV 800
>gi|427701534|ref|YP_007044756.1| chaperone ATPase [Cyanobium gracile PCC 6307]
gi|427344702|gb|AFY27415.1| ATPase with chaperone activity, ATP-binding subunit [Cyanobium
gracile PCC 6307]
Length = 849
Score = 345 bits (885), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 164/273 (60%), Positives = 214/273 (78%), Gaps = 13/273 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS++AM+R+DMSE+ME+HT
Sbjct: 547 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEDAMIRLDMSEFMERHT 606
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGF GGQLTEAVR RP++V+LFDEIEKAH DV N++LQLL+DGR+TD
Sbjct: 607 VSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRLTDS 666
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS-------------DQMERGVAEELRRRFR 168
KG+TVD KNT+IIMTSNIG VI + +++ V EEL++ FR
Sbjct: 667 KGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFGGGDVEETQYNRIRSLVNEELKQYFR 726
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNR+DE+IVFRQL + ++ I +IML+E++ R++ K + ++VT FK++L+EEGYNP
Sbjct: 727 PEFLNRLDEIIVFRQLTRDEVKLIAEIMLREVFARMQDKGIGMSVTEAFKERLVEEGYNP 786
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDS 261
SYGARPLRRA+ RLLED+LAE L+G I GD+
Sbjct: 787 SYGARPLRRAVMRLLEDSLAEEFLSGRIGEGDA 819
>gi|434403529|ref|YP_007146414.1| ATPase with chaperone activity, ATP-binding subunit
[Cylindrospermum stagnale PCC 7417]
gi|428257784|gb|AFZ23734.1| ATPase with chaperone activity, ATP-binding subunit
[Cylindrospermum stagnale PCC 7417]
Length = 817
Score = 345 bits (884), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 165/283 (58%), Positives = 219/283 (77%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTELA ALA +FGS+EAM+R+DMSE+ME HT
Sbjct: 519 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELAKALAAYFFGSEEAMIRLDMSEFMESHT 578
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+++GGQLTEAVR +P+SV+LFDEIEKAH DV N++LQ+LDDG++TD
Sbjct: 579 VSKLIGSPPGYVGYDDGGQLTEAVRRKPYSVLLFDEIEKAHPDVFNMLLQILDDGQLTDA 638
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+ VD KNT+II+TSNIG VI + +S +++ V EEL+ FRP
Sbjct: 639 KGRKVDFKNTLIILTSNIGSKVIEKGGSGLGFEFADNQSEASYNRIRTLVNEELKAYFRP 698
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVF QL K ++ +I +IML ++ RL + ++L V+ FK+++++EGYNPS
Sbjct: 699 EFLNRLDEIIVFTQLGKDEVKQIAEIMLLDVAGRLTERGIKLEVSDRFKERVVQEGYNPS 758
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI RLLED+LAE +L+G I GD+ +D D G V
Sbjct: 759 YGARPLRRAIMRLLEDSLAEALLSGQIADGDTAIVDIDDDGQV 801
>gi|254416553|ref|ZP_05030305.1| ATPase, AAA family [Coleofasciculus chthonoplastes PCC 7420]
gi|196176757|gb|EDX71769.1| ATPase, AAA family [Coleofasciculus chthonoplastes PCC 7420]
Length = 827
Score = 345 bits (884), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 168/283 (59%), Positives = 213/283 (75%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG++DPNRPI+SF+F+GPTGVGKTELA ALA +FGS+EAM+R+DMSEYM+ HT
Sbjct: 529 AIRRARVGLKDPNRPIASFIFSGPTGVGKTELAKALAAYFFGSEEAMIRLDMSEYMDPHT 588
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPG+VG++ GGQLTEAVR +P++V+LFDEIEKAH DV N +LQLLDDGR+TD
Sbjct: 589 VSKLIGSPPGFVGYDEGGQLTEAVRRQPYTVLLFDEIEKAHPDVFNSLLQLLDDGRLTDA 648
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESI---------LGSDQMER---GVAEELRRRFRP 169
KG+TVD KNT+IIMTSNIG VI + L Q R V +EL+ FRP
Sbjct: 649 KGRTVDFKNTLIIMTSNIGSRVIEKGGGGFGFEDSDNLAESQYNRIRSRVNDELKDYFRP 708
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+D++IVFRQLN+ ++ +I D++L E+ RL + + L VT FK +L+EEGY+PS
Sbjct: 709 EFLNRLDDIIVFRQLNRDEIKQIADLLLVEVSTRLVEQGITLEVTERFKDRLVEEGYDPS 768
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRR I RLLED+LAE +L I G++ +D D G V
Sbjct: 769 YGARPLRRTIMRLLEDSLAEAMLASEILEGETAVVDVDENGEV 811
>gi|17229455|ref|NP_486003.1| endopeptidase Clp ATP-binding chain [Nostoc sp. PCC 7120]
gi|17131053|dbj|BAB73662.1| endopeptidase Clp ATP-binding chain [Nostoc sp. PCC 7120]
Length = 814
Score = 344 bits (883), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 166/282 (58%), Positives = 214/282 (75%), Gaps = 11/282 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG++ PNRPI+SF+F+GPTGVGKTELA ALA +FG+++AM+R DMSEYME HT
Sbjct: 517 AIRRARVGLKSPNRPIASFIFSGPTGVGKTELAKALAAYFFGAEDAMIRFDMSEYMESHT 576
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG++ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQLLDDG +TD
Sbjct: 577 VSKLIGSPPGYVGYDEGGQLTEAVRRRPYTVLLFDEIEKAHPDVFNMLLQLLDDGHLTDA 636
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-----------ESILGSDQMERGVAEELRRRFRPE 170
KG+ VD KNT+II+TSNIG VI + ++ +++ V EEL+ FRPE
Sbjct: 637 KGRKVDFKNTLIILTSNIGSKVIEKGGGGLGFEFDNQAEASYNRIRNLVNEELKNYFRPE 696
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNR+DEVIVF QL++ ++ +I DIML+++ RL K + L VT FK+ ++ EGYNPSY
Sbjct: 697 FLNRLDEVIVFTQLSRDEVKQIADIMLRDVASRLTEKGITLEVTERFKELVVTEGYNPSY 756
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
GARPLRRAI RLLED+LAE++L+G I GD+ D + G V
Sbjct: 757 GARPLRRAIMRLLEDSLAEVLLSGEITEGDTAIADVNDDGQV 798
>gi|427715740|ref|YP_007063734.1| ATPase [Calothrix sp. PCC 7507]
gi|427348176|gb|AFY30900.1| ATPase AAA-2 domain protein [Calothrix sp. PCC 7507]
Length = 815
Score = 343 bits (881), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 163/282 (57%), Positives = 218/282 (77%), Gaps = 11/282 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTELA ALA +FG++++M+R+DMSEYME HT
Sbjct: 518 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELAKALAAYFFGAEDSMIRLDMSEYMEGHT 577
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+++GGQLTEAVR +P+SV+LFDEIEKAH DV N++LQLLDDG +TD
Sbjct: 578 VSKLIGSPPGYVGYDDGGQLTEAVRRKPYSVLLFDEIEKAHPDVFNMLLQLLDDGHLTDA 637
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-----------ESILGSDQMERGVAEELRRRFRPE 170
KG+ VD KNT+II+TSNIG VI + ++ +++ V EEL+ FRPE
Sbjct: 638 KGRKVDFKNTLIILTSNIGSKVIEKGGGGLGFDFDNQADASYNRIRTLVNEELKAYFRPE 697
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNR+D++IVF QL+K ++ +I +I+L+E+ RL + + L VT FK+++++EGYNPSY
Sbjct: 698 FLNRLDDIIVFTQLSKDEVKQISEILLREVSSRLTERGITLEVTERFKERVVQEGYNPSY 757
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
GARPLRRAI RLLED+LAE +L G I GD+ +D D G V
Sbjct: 758 GARPLRRAIMRLLEDSLAEALLAGQITNGDTAIVDVDDDGQV 799
>gi|119511432|ref|ZP_01630543.1| UvrB/UvrC protein [Nodularia spumigena CCY9414]
gi|119463897|gb|EAW44823.1| UvrB/UvrC protein [Nodularia spumigena CCY9414]
Length = 817
Score = 343 bits (879), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 170/285 (59%), Positives = 215/285 (75%), Gaps = 11/285 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTELA +LA +F S+EAM+R+DMSEYME HT
Sbjct: 520 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELAKSLASYFFSSEEAMIRLDMSEYMEGHT 579
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+++GGQLTEAVR +P+SVILFDEIEKAH DV N++LQLLDDG +TD
Sbjct: 580 VSKLIGSPPGYVGYDDGGQLTEAVRRKPYSVILFDEIEKAHPDVFNMLLQLLDDGHLTDA 639
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-ESILGSD----------QMERGVAEELRRRFRPE 170
KG+ VD KNT+II+TSNIG VI + LG D ++ V EEL+ FRPE
Sbjct: 640 KGRKVDFKNTLIILTSNIGSKVIEKGGGGLGFDFETAADASYNRIRTLVNEELKAYFRPE 699
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNR+D++IVF QL K ++ +I DIML+EI RL K + L VT FK++++EEGYNPSY
Sbjct: 700 FLNRLDDIIVFTQLAKDEVKQIADIMLREIASRLTEKGITLEVTERFKERVVEEGYNPSY 759
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMY 275
GARPLRRAI RLLED LAE +L+G + G + D D V ++
Sbjct: 760 GARPLRRAIMRLLEDPLAEAMLSGQVTEGVTAIADIDDDNQVTIH 804
>gi|427740130|ref|YP_007059674.1| chaperone ATPase [Rivularia sp. PCC 7116]
gi|427375171|gb|AFY59127.1| ATPase with chaperone activity, ATP-binding subunit [Rivularia sp.
PCC 7116]
Length = 852
Score = 342 bits (877), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 161/282 (57%), Positives = 216/282 (76%), Gaps = 11/282 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTELA +LA +FGS+E M+R+DMSE+ME+HT
Sbjct: 555 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELAKSLASYFFGSEENMIRLDMSEFMERHT 614
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPG+VG+E GGQLTEAVR +P++V+LFDEIEKAH D+ N++LQ+LDDG +TD
Sbjct: 615 VSKLIGSPPGFVGYEEGGQLTEAVRRKPYTVLLFDEIEKAHPDIFNMLLQMLDDGHLTDA 674
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-----------ESILGSDQMERGVAEELRRRFRPE 170
KG+ VD KNT+II+TSNIG VI + E+ ++++ V EEL+ FRPE
Sbjct: 675 KGRKVDFKNTLIILTSNIGSRVIEKGGGGLGFNLEDEAEANYNRIKTLVNEELKNYFRPE 734
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNR+DE+IVF QL K ++ EI +I+LKE+ RL K + L ++ +FK +++EGY+PSY
Sbjct: 735 FLNRLDEIIVFTQLQKDEIKEIAEILLKEVSSRLAEKEISLQISESFKDLVVQEGYDPSY 794
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
GARPLRRAI LLED+LAE +L+G I GD+ +D D G V
Sbjct: 795 GARPLRRAIMNLLEDSLAEAMLSGQITAGDTALIDVDDDGKV 836
>gi|434389096|ref|YP_007099707.1| ATPase with chaperone activity, ATP-binding subunit [Chamaesiphon
minutus PCC 6605]
gi|428020086|gb|AFY96180.1| ATPase with chaperone activity, ATP-binding subunit [Chamaesiphon
minutus PCC 6605]
Length = 833
Score = 342 bits (876), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 162/296 (54%), Positives = 222/296 (75%), Gaps = 12/296 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+++M+R+DMSEYME+HT
Sbjct: 529 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALATYFFGSEDSMIRLDMSEYMERHT 588
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR +P++V+LFDEIEKAH D+ N++LQ+L+DGR+TD
Sbjct: 589 VSKLIGSPPGYVGYSEGGQLTEAVRRKPYTVVLFDEIEKAHPDIFNMLLQILEDGRLTDA 648
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT+II+TSN+G VI + ++ +++ V EEL+ FRP
Sbjct: 649 KGRTVDFKNTLIILTSNVGSKVIEKGGGGLGFEFSDNKTEATYNRIRSLVNEELKNYFRP 708
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVF+QL K ++ +I DIMLK+++ RL + + L VT FK +LI+EGYNP+
Sbjct: 709 EFLNRLDEIIVFQQLTKPEVKQIADIMLKDLFTRLTQQGIHLEVTDRFKDRLIDEGYNPA 768
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMTVC 285
YGARPLRRAI RLLED LAE +L+G ++ GD+ +D G I+ + + +
Sbjct: 769 YGARPLRRAIMRLLEDILAEEMLSGRLKDGDTSIVDMGEDGKAIVTPKQQDKLPLA 824
>gi|307150870|ref|YP_003886254.1| ATPase AAA-2 domain-containing protein [Cyanothece sp. PCC 7822]
gi|306981098|gb|ADN12979.1| ATPase AAA-2 domain protein [Cyanothece sp. PCC 7822]
Length = 790
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 172/284 (60%), Positives = 215/284 (75%), Gaps = 13/284 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG++DPNRPI+SF+F GPTGVGKTELA ALA FGS +AM+R+DMSE+ME HT
Sbjct: 491 AVRRARVGMKDPNRPIASFIFAGPTGVGKTELAKALATFLFGSADAMIRLDMSEFMEPHT 550
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGY+G++ GGQLTEAVR +P++VILFDEIEKAH DV N +LQLLDDGR+TD
Sbjct: 551 VSKLIGSPPGYIGYDEGGQLTEAVRRKPYTVILFDEIEKAHPDVFNTLLQLLDDGRLTDA 610
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-ESILG---SDQMERG--------VAEELRRRFRP 169
KG+TVD KNT+IIMTSN+G VI + LG SD + V EEL+ FRP
Sbjct: 611 KGRTVDFKNTLIIMTSNVGSKVIEKGGGGLGFAISDDVSESQYNYIRNLVTEELKNYFRP 670
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERL-EAKNMELTVTHTFKKKLIEEGYNP 228
EFLNR+DE+IVFRQL + ++ EI DI+L+EI +L E + + L VT FK+ +++EGY+P
Sbjct: 671 EFLNRLDEIIVFRQLTRNEVKEIADILLQEIAIQLKEQREIVLDVTEGFKELVVKEGYDP 730
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
SYGARPLRRAI R LED+LAE IL G + GDS+ +D + G V
Sbjct: 731 SYGARPLRRAIMRRLEDSLAEAILAGQVHDGDSIIVDVNEQGQV 774
>gi|440684474|ref|YP_007159269.1| ATPase AAA-2 domain protein [Anabaena cylindrica PCC 7122]
gi|428681593|gb|AFZ60359.1| ATPase AAA-2 domain protein [Anabaena cylindrica PCC 7122]
Length = 832
Score = 341 bits (874), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 163/286 (56%), Positives = 218/286 (76%), Gaps = 11/286 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTELA +LA +FG++ AM+R+DMSEYME H
Sbjct: 537 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELAKSLAAYFFGAESAMIRLDMSEYMESHN 596
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG++ GGQLTEAVR +P++V+LFDEIEKAH DV N++LQLLDDG +TD
Sbjct: 597 VSKLIGSPPGYVGYDEGGQLTEAVRRKPYTVVLFDEIEKAHPDVFNMLLQLLDDGHLTDA 656
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESI-LGSD----------QMERGVAEELRRRFRPE 170
KG+ VD KNT+II+TSN+G VI + + LG + ++ V EEL+ FRPE
Sbjct: 657 KGRKVDFKNTLIILTSNVGSKVIEKGGMSLGFEFDNQADASYHRIRNLVNEELKAYFRPE 716
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNR+D++IVF QLNK ++ +I +IML ++ RL + ++L VT +FK +++ EGY+PSY
Sbjct: 717 FLNRLDDIIVFTQLNKAEVKQIAEIMLVDVASRLTERRIKLEVTESFKDRVVTEGYDPSY 776
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYR 276
GARPLRRAI RLLED+LAE +L G I GD+ +D D G VI+ +
Sbjct: 777 GARPLRRAIMRLLEDSLAEALLAGQIGEGDTAIVDIDDDGQVIVRK 822
>gi|56751262|ref|YP_171963.1| ATP-dependent Clp protease regulatory subunit ClpC [Synechococcus
elongatus PCC 6301]
gi|56686221|dbj|BAD79443.1| ATP-dependent Clp protease regulatory subunit ClpC [Synechococcus
elongatus PCC 6301]
Length = 839
Score = 340 bits (873), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 174/284 (61%), Positives = 219/284 (77%), Gaps = 13/284 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAM+R+DMSEYME+HT
Sbjct: 540 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEYMERHT 599
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+L DEIEKAH DVLN++LQLL+DGR+TD
Sbjct: 600 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLLDEIEKAHPDVLNLLLQLLEDGRLTDA 659
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARES------ILGSDQMERG-------VAEELRRRFR 168
KG+TVD KNT+II+TSNIG VI + G D+ E V EEL++ FR
Sbjct: 660 KGRTVDFKNTLIILTSNIGSKVIEKGGGGLGFEFSGVDEAENQYNRIRSLVNEELKQYFR 719
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNR+DE+IVF QLNK ++ EI DIML+E++ R+ K + L+VT FK +L+EEGYNP
Sbjct: 720 PEFLNRLDEIIVFCQLNKEEVKEIADIMLREVFGRMLEKGISLSVTEKFKDRLVEEGYNP 779
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
SYGARPLRRAI RLLED+LAE L+G ++ GD+ +D G V
Sbjct: 780 SYGARPLRRAIMRLLEDSLAEEFLSGKLREGDTAVVDIGEEGKV 823
>gi|423062414|ref|ZP_17051204.1| ATPase AAA-2 domain protein [Arthrospira platensis C1]
gi|406716322|gb|EKD11473.1| ATPase AAA-2 domain protein [Arthrospira platensis C1]
Length = 824
Score = 340 bits (873), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 162/283 (57%), Positives = 214/283 (75%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA+ +FGS EAM+R+DMSE+ME+HT
Sbjct: 522 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAYYFFGSMEAMIRLDMSEFMERHT 581
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPG+VG++ GGQLTEAVR RP++VILFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 582 VSKLIGSPPGFVGYDEGGQLTEAVRRRPYTVILFDEIEKAHPDVFNMLLQILEDGRLTDA 641
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMERG------------VAEELRRRFRP 169
KG+TV KNT+IIMTSNIG VI + + E+ V EEL++ FRP
Sbjct: 642 KGRTVSFKNTLIIMTSNIGSKVIEKGGGGLGFEFEQSQEEAQYTRIRNLVNEELKQYFRP 701
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EF+NR+DE+IVFR+L K ++ +I DI+L+E++ RL K + L V+ FK ++E GY+P+
Sbjct: 702 EFINRLDEIIVFRKLTKDEVKQIADILLEEVFARLRDKEIVLEVSDRFKDHIVEVGYDPN 761
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI LLED LAE +L+G ++ GD +D D G V
Sbjct: 762 YGARPLRRAIMNLLEDVLAETMLSGTLKPGDQALVDLDDDGQV 804
>gi|209522992|ref|ZP_03271549.1| ATPase AAA-2 domain protein [Arthrospira maxima CS-328]
gi|209496579|gb|EDZ96877.1| ATPase AAA-2 domain protein [Arthrospira maxima CS-328]
Length = 824
Score = 340 bits (872), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 162/283 (57%), Positives = 214/283 (75%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA+ +FGS EAM+R+DMSE+ME+HT
Sbjct: 522 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAYYFFGSMEAMIRLDMSEFMERHT 581
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPG+VG++ GGQLTEAVR RP++VILFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 582 VSKLIGSPPGFVGYDEGGQLTEAVRRRPYTVILFDEIEKAHPDVFNMLLQILEDGRLTDA 641
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMERG------------VAEELRRRFRP 169
KG+TV KNT+IIMTSNIG VI + + E+ V EEL++ FRP
Sbjct: 642 KGRTVSFKNTLIIMTSNIGSKVIEKGGGGLGFEFEQSQEEAQYTRIRNLVNEELKQYFRP 701
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EF+NR+DE+IVFR+L K ++ +I DI+L+E++ RL K + L V+ FK ++E GY+P+
Sbjct: 702 EFINRLDEIIVFRKLTKDEVKQIADILLEEVFARLRDKEIVLEVSDRFKDHIVEVGYDPN 761
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI LLED LAE +L+G ++ GD +D D G V
Sbjct: 762 YGARPLRRAIMNLLEDVLAETMLSGTLKPGDQALVDLDDDGQV 804
>gi|428300697|ref|YP_007139003.1| ATPase [Calothrix sp. PCC 6303]
gi|428237241|gb|AFZ03031.1| ATPase AAA-2 domain protein [Calothrix sp. PCC 6303]
Length = 817
Score = 340 bits (872), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 163/296 (55%), Positives = 225/296 (76%), Gaps = 11/296 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTELA +LA +FG+++AM+R+DMSE+ME+HT
Sbjct: 521 AVRRARVGLKNPNRPIASFIFSGPTGVGKTELAKSLAAYFFGAEDAMIRLDMSEFMERHT 580
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+E GGQLTEAVR +P++VILFDEIEKAH DV N++LQLLDDG +TD
Sbjct: 581 VSKLIGSPPGYVGYEEGGQLTEAVRRKPYTVILFDEIEKAHPDVFNMLLQLLDDGHLTDA 640
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-----------ESILGSDQMERGVAEELRRRFRPE 170
KG+ VD KNT+II+TSNIG VI + S ++++ V EEL+ FRPE
Sbjct: 641 KGRKVDFKNTLIILTSNIGSKVIEKGGGGIGFQFDDASEASYNRIKTLVNEELKNFFRPE 700
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNR+D++IVF QLNK ++ +I +IML ++ RL+ + + L V+ FK+++++EGY+PSY
Sbjct: 701 FLNRLDDIIVFTQLNKDEVKQIAEIMLLDVGSRLKERGIILQVSDRFKERVVQEGYDPSY 760
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMTVCA 286
GARPLRRAI RLLED+LAE +L+G I GD+ +D D G V + + + + + +
Sbjct: 761 GARPLRRAIMRLLEDSLAEAMLSGQIVDGDTALIDVDDDGKVKVIKSESRELLLAS 816
>gi|412985529|emb|CCO18975.1| predicted protein [Bathycoccus prasinos]
Length = 944
Score = 339 bits (870), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 164/285 (57%), Positives = 218/285 (76%), Gaps = 12/285 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++ PNRP++SF+F GPTGVGK+ELA +L+ YFGS+EAMVR+DMSE+ME+HT
Sbjct: 640 AIRRARTGLKSPNRPVASFIFAGPTGVGKSELAKSLSQFYFGSEEAMVRLDMSEFMERHT 699
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++++LFDEIEKAH DV N+MLQ+L+DGR+TD
Sbjct: 700 VSKLIGSPPGYVGYSEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDS 759
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-ESILG-------SDQ----MERGVAEELRRRFRP 169
KG+ +D KNT+IIMTSN+G I + LG DQ ++ V +EL+ FRP
Sbjct: 760 KGRVIDFKNTLIIMTSNVGAQQIEKGGGGLGFQLDDNVEDQSYQRIKSLVQDELKNYFRP 819
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+I+FRQLNK ++ EI IML +++RL+ K + L VT FK K+++EG++P+
Sbjct: 820 EFLNRLDEIIIFRQLNKQEVREIAMIMLNNVFKRLKEKEITLDVTDRFKDKVVDEGFSPA 879
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
+GARPLRRAI RLLEDNLAE +L+G I G S MD ++ G +I+
Sbjct: 880 FGARPLRRAIMRLLEDNLAEKMLSGDIAEGTSAIMDVNAEGEIIV 924
>gi|218185563|gb|EEC67990.1| hypothetical protein OsI_35764 [Oryza sativa Indica Group]
Length = 853
Score = 339 bits (870), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 162/282 (57%), Positives = 215/282 (76%), Gaps = 7/282 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKE----AMVRIDMSEYM 57
+ RAR+G++ P RP++S +F GPTGVGK+ELA ALA Y+GS E AMVR+DMSEYM
Sbjct: 566 AIRRARLGLKHPGRPVASLVFAGPTGVGKSELAKALAACYYGSSESEEAAMVRLDMSEYM 625
Query: 58 EKHTVSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGR 117
EKH V++ GSPPGYVG GGQLTEAVR RPH+V+L DE+EKAHRDV +++LQ+LDDGR
Sbjct: 626 EKHAVARLVGSPPGYVGHGEGGQLTEAVRRRPHAVVLLDEVEKAHRDVFDLLLQVLDDGR 685
Query: 118 VTDGKGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMER---GVAEELRRRFRPEFLNR 174
+TDGKG+TVD KNT+I+MT+NIG S+I G+ R V +E++R FRPEFLNR
Sbjct: 686 LTDGKGRTVDFKNTLIVMTTNIGSSLIVNNGGDGAAAAGRIKNTVTDEMKRHFRPEFLNR 745
Query: 175 IDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARP 234
+DEVIVF+ L ++++ +I IML+E R+ K ++L VT F++ ++EEG++PSYGARP
Sbjct: 746 LDEVIVFQPLTELEVGKIAGIMLEEFAGRVREKGIKLKVTDKFRELVVEEGFDPSYGARP 805
Query: 235 LRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYR 276
LRRA+ RLLED LAE +L G ++ GDSV +D DS GN ++ R
Sbjct: 806 LRRAVVRLLEDTLAEKMLAGEVREGDSVIVDADSAGNAVVRR 847
>gi|282896226|ref|ZP_06304249.1| Probable ATP-dependent Clp protease ATP-binding subunit
[Raphidiopsis brookii D9]
gi|281198915|gb|EFA73793.1| Probable ATP-dependent Clp protease ATP-binding subunit
[Raphidiopsis brookii D9]
Length = 709
Score = 339 bits (869), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 163/282 (57%), Positives = 214/282 (75%), Gaps = 11/282 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+L RARVG++ PNRPI+SF+F+GPTGVGKTELA ALA +FG++++M+R+DMSEYME H
Sbjct: 411 SLRRARVGLKSPNRPIASFIFSGPTGVGKTELAKALAAYFFGAEDSMIRLDMSEYMESHN 470
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG++ GGQLTEAVR +P++++LFDEIEKAH DV N++LQ+LDDG +TD
Sbjct: 471 VSKLIGSPPGYVGYDEGGQLTEAVRRKPYTLLLFDEIEKAHPDVFNMLLQILDDGHLTDA 530
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-----------ESILGSDQMERGVAEELRRRFRPE 170
KG+ VD KNT+II+TSNIG +I + ++ +++ V EEL+ FRPE
Sbjct: 531 KGRKVDFKNTLIILTSNIGSKLIEKGGMSLGFEFDNQANASYNRIRNLVNEELKSYFRPE 590
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNR+DE+IVF QLNK ++ EI IML+E+ +RL+ K ++L VT FK ++ EGY+PSY
Sbjct: 591 FLNRVDEIIVFSQLNKDEVKEISQIMLEEVAKRLQEKGIKLEVTEAFKDLVVTEGYDPSY 650
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
GARPLRRAI RLLED+LAE IL+G I D +D D G V
Sbjct: 651 GARPLRRAIMRLLEDSLAEAILSGEIGEDDQAIVDVDDDGLV 692
>gi|186683718|ref|YP_001866914.1| ATPase [Nostoc punctiforme PCC 73102]
gi|186466170|gb|ACC81971.1| ATPase AAA-2 domain protein [Nostoc punctiforme PCC 73102]
Length = 817
Score = 339 bits (869), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 164/281 (58%), Positives = 218/281 (77%), Gaps = 11/281 (3%)
Query: 3 LERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTV 62
+ RARVG+++PNRPI+SF+F+GPTGVGKTELA ALA +FG++++M+R+DMSEYME HTV
Sbjct: 521 IRRARVGLKNPNRPIASFIFSGPTGVGKTELAKALASYFFGAEDSMIRLDMSEYMESHTV 580
Query: 63 SKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGK 122
+K GSPPGYVG++ GGQLTEAVR +P++V+LFDEIEKAH DV N++LQ+LDDG +TD K
Sbjct: 581 AKLIGSPPGYVGYDEGGQLTEAVRRKPYTVLLFDEIEKAHPDVFNMLLQILDDGHLTDAK 640
Query: 123 GQTVDLKNTIIIMTSNIGDSVIAR-ESILGSD----------QMERGVAEELRRRFRPEF 171
G+ VD KNT+II+TSNIG VI + S LG D ++ V EEL+ FRPEF
Sbjct: 641 GRKVDFKNTLIILTSNIGSKVIEKGGSGLGFDFDTQANASYNRIRTLVNEELKAYFRPEF 700
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNR+DE+IVF QL++ ++ +I +IML+E+ +RL K + L V+ FK+ +++EGYNPSYG
Sbjct: 701 LNRLDEIIVFTQLSRDEVKQIAEIMLREVSKRLTEKGITLEVSDRFKELVVQEGYNPSYG 760
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
ARPLRRAI RLLED+LAE +L+G I GD+ +D D V
Sbjct: 761 ARPLRRAIMRLLEDSLAEAMLSGEITDGDTALIDVDDDSQV 801
>gi|335039209|ref|ZP_08532387.1| ATPase AAA-2 domain protein [Caldalkalibacillus thermarum TA2.A1]
gi|334180907|gb|EGL83494.1| ATPase AAA-2 domain protein [Caldalkalibacillus thermarum TA2.A1]
Length = 811
Score = 338 bits (868), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 160/277 (57%), Positives = 208/277 (75%), Gaps = 9/277 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FG + A++RIDMSEYMEKHT
Sbjct: 524 AIRRARAGLKDPKRPIGSFIFLGPTGVGKTELAKALAESLFGDENAVIRIDMSEYMEKHT 583
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG+E GGQLTE VR +P+SVIL DEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 584 TSRLIGSPPGYVGYEEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDGRLTDA 643
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+TVD KNT+IIMTSN+G ++ + + LG M+ V EL+R FRPEFL
Sbjct: 644 KGRTVDFKNTVIIMTSNVGAELLRKGTTLGFQAENREQNYQNMKEKVMGELKRMFRPEFL 703
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDEVIVF L + LM+IVD+M K++ +RL+ +++E T+T K+ +++EGY+P YGA
Sbjct: 704 NRIDEVIVFHSLEEEHLMQIVDLMAKQLQKRLKEQDIEFTLTEEAKRHIVKEGYDPQYGA 763
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
RPLRRA+ R++ED L+E +L G I GDSV +D + G
Sbjct: 764 RPLRRALQRMVEDRLSEELLQGNISKGDSVVIDVEDG 800
>gi|359459996|ref|ZP_09248559.1| ATPase AAA [Acaryochloris sp. CCMEE 5410]
Length = 822
Score = 338 bits (868), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 164/282 (58%), Positives = 213/282 (75%), Gaps = 12/282 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R R G++DPNRPI+SF+F+GPTGVGKTELA LA YFGS+ AM+R+DMSEYME HT
Sbjct: 529 AIRRVRTGLKDPNRPIASFVFSGPTGVGKTELAKVLASSYFGSEAAMIRLDMSEYMEGHT 588
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V+K GSPPGYVG+ GGQLTEAVR +P++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 589 VAKLIGSPPGYVGYNEGGQLTEAVRRKPYTVVLFDEIEKAHPDVFNLLLQVLEDGRLTDA 648
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-ESILG--------SDQMERGVA---EELRRRFRP 169
KG+TVD KNT++IMTSN+G VI + S LG + Q R V+ EEL++ FRP
Sbjct: 649 KGRTVDFKNTLLIMTSNLGSKVIQKGGSGLGFEFSKDQSAAQYSRIVSIVNEELKQFFRP 708
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVF+QL+K ++ +I DI+L+E++ RL + + L VT FK +L+E GY+P
Sbjct: 709 EFLNRLDEIIVFQQLHKTEVKQIADILLQEVFARLSEQGISLEVTDLFKDRLVETGYDPE 768
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGN 271
GARPLRRAI RLLED LAE ILT ++ D + +D D G
Sbjct: 769 MGARPLRRAITRLLEDCLAEEILTRRVKARDEIVIDVDEEGQ 810
>gi|296082282|emb|CBI21287.3| unnamed protein product [Vitis vinifera]
Length = 551
Score = 338 bits (868), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 172/240 (71%), Positives = 203/240 (84%), Gaps = 2/240 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
L R GIRDP RPI+SFLFTGPTGVGKTELA +A EYFGSKEAMVRIDMSEYMEKHT
Sbjct: 299 ALRRDGAGIRDPTRPIASFLFTGPTGVGKTELAKLIALEYFGSKEAMVRIDMSEYMEKHT 358
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ GSPPGYVG + GGQLTEAVR RP++++LFDEIEKAHRDV+NVMLQ+LDDGR+TDG
Sbjct: 359 VSRLCGSPPGYVGHDEGGQLTEAVRRRPYNLVLFDEIEKAHRDVMNVMLQILDDGRLTDG 418
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESI-LGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
KG+TVD KNT+IIMTSNIG S+I + I LG +Q++ VAEEL++ F PEFLNR+DEVIV
Sbjct: 419 KGRTVDFKNTLIIMTSNIGGSLITQTKIQLGFEQVKNLVAEELKKNFLPEFLNRLDEVIV 478
Query: 181 FRQLNKMQLMEIVDIMLKEIYERL-EAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
F+QL+K QL EIVDI L+E+Y R EAKN+ + VT K+KL+EEG++P YGARPLRRAI
Sbjct: 479 FKQLSKPQLREIVDIRLEEVYTRFEEAKNINVEVTEELKEKLVEEGFSPGYGARPLRRAI 538
>gi|300864107|ref|ZP_07109004.1| ATPase AAA-2 [Oscillatoria sp. PCC 6506]
gi|300337892|emb|CBN54150.1| ATPase AAA-2 [Oscillatoria sp. PCC 6506]
Length = 823
Score = 338 bits (866), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 165/268 (61%), Positives = 210/268 (78%), Gaps = 12/268 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAM+R+DMSEYME+HT
Sbjct: 525 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALASYFFGSEEAMIRLDMSEYMERHT 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 585 VSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSNIG +VI + ++ +++ V EEL+R FRP
Sbjct: 645 KGRTVDFKNTLLIMTSNIGSTVIEKGGTGIGFEFADNQADAQYNRIRSLVNEELKRYFRP 704
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL ++ EI IML E++ RL K + L VT FK++L++EGYN S
Sbjct: 705 EFLNRLDEIIVFRQLIMDEIKEIAVIMLNEVFGRLTEKGITLDVTEAFKERLVKEGYNQS 764
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQ 257
YGARPLRRAI RLLED LAE IL+G I+
Sbjct: 765 YGARPLRRAIMRLLEDVLAEEILSGRIK 792
>gi|427728669|ref|YP_007074906.1| chaperone ATPase [Nostoc sp. PCC 7524]
gi|427364588|gb|AFY47309.1| ATPase with chaperone activity, ATP-binding subunit [Nostoc sp. PCC
7524]
Length = 815
Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 164/282 (58%), Positives = 212/282 (75%), Gaps = 11/282 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTELA ALA +FG+++AM+R+DMSEYME HT
Sbjct: 518 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELAKALAAYFFGAEDAMIRLDMSEYMESHT 577
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG++ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+LDDG +TD
Sbjct: 578 VSKLIGSPPGYVGYDEGGQLTEAVRRRPYTVLLFDEIEKAHPDVFNMLLQILDDGHLTDA 637
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-----------ESILGSDQMERGVAEELRRRFRPE 170
KG+ VD KNT+II+TSNIG VI + + ++ V EEL+ FRPE
Sbjct: 638 KGRKVDFKNTLIILTSNIGSKVIEKGGGGLGFEFDNQPEASYHRIRNLVNEELKNYFRPE 697
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNR+DE+IVF QL+K ++ +I DIML+E+ RL K + L VT FK ++ EGYNPSY
Sbjct: 698 FLNRVDEIIVFTQLSKDEVKQIADIMLREVASRLTEKGIILEVTERFKDLVVTEGYNPSY 757
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
GARPLRRAI RLLED+LAE +L G ++ G + +D + G V
Sbjct: 758 GARPLRRAIMRLLEDSLAEAMLAGELREGCTAIVDVNDDGQV 799
>gi|298490318|ref|YP_003720495.1| ATPase AAA-2 domain-containing protein ['Nostoc azollae' 0708]
gi|298232236|gb|ADI63372.1| ATPase AAA-2 domain protein ['Nostoc azollae' 0708]
Length = 815
Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 163/286 (56%), Positives = 219/286 (76%), Gaps = 11/286 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++ RARVG+++P RPI+SF+F+GPTGVGKTELA ALA +FG+ ++M+R+DMSEYME H
Sbjct: 518 SIRRARVGLKNPKRPIASFIFSGPTGVGKTELAKALAAYFFGAGDSMIRLDMSEYMESHN 577
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG++ GGQLTEAVR +P++V+LFDEIEKAH DV N++LQ+LD+G +TD
Sbjct: 578 VSKLIGSPPGYVGYDEGGQLTEAVRRKPYTVLLFDEIEKAHSDVFNMLLQILDEGHLTDA 637
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESI-LG------SDQMERG----VAEELRRRFRPE 170
KG+ VD KNT+II+TSNIG VI + I LG +D G V EEL+ FRPE
Sbjct: 638 KGRKVDFKNTLIILTSNIGSKVIEKGGISLGFEFDNQADASYNGIRKLVNEELKAYFRPE 697
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNR+D++IVF QLNK ++ +I +IML ++ RL+ + ++L VT +FK+ ++ EGY+PSY
Sbjct: 698 FLNRVDDIIVFTQLNKEEVKQIAEIMLHDVANRLKDRGIKLEVTESFKELVVREGYDPSY 757
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYR 276
GARPLRRAI RLLED+LAE IL+ +I GD+ +D D G V + +
Sbjct: 758 GARPLRRAIMRLLEDSLAEAILSSHILEGDTAIVDVDDDGQVTVRK 803
>gi|172035917|ref|YP_001802418.1| ATP-dependent Clp protease regulatory subunit [Cyanothece sp. ATCC
51142]
gi|354556035|ref|ZP_08975333.1| ATPase AAA-2 domain protein [Cyanothece sp. ATCC 51472]
gi|171697371|gb|ACB50352.1| ATP-dependent Clp protease, regulatory subunit [Cyanothece sp. ATCC
51142]
gi|353552034|gb|EHC21432.1| ATPase AAA-2 domain protein [Cyanothece sp. ATCC 51472]
Length = 789
Score = 337 bits (865), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 165/286 (57%), Positives = 217/286 (75%), Gaps = 13/286 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R+G+++P RPI+SF+F GPTGVGKTEL ALA FGSK+AM+R+DMSEYME+HT
Sbjct: 491 AIRRSRIGLQNPKRPIASFIFAGPTGVGKTELTKALAQFLFGSKDAMIRLDMSEYMERHT 550
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK G+ PG++G+E GGQLTEAVR +P+SV+LFDEIEKAH DV N++LQLL+DGR+TD
Sbjct: 551 VSKLIGTAPGFIGYEEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNLLLQLLEDGRLTDS 610
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD +NT+IIMTSN+G VI + + L +++ V +EL++ FRP
Sbjct: 611 KGRTVDFRNTLIIMTSNLGSKVIEKGGYNFGFETESDDVNLQYKRIQEAVNDELKQYFRP 670
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERL-EAKNMELTVTHTFKKKLIEEGYNP 228
EFLNR+DE+IVFRQL K ++ EI DI+L E+ ++L E + + LTV+ FK ++EEGY+P
Sbjct: 671 EFLNRLDEMIVFRQLTKPEVTEIADILLAEVAQQLYEQRQITLTVSDGFKGLVVEEGYDP 730
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
SYGARPLRRAI R LED+LAE IL G IQ GDSV +D VI+
Sbjct: 731 SYGARPLRRAIMRRLEDSLAESILAGNIQDGDSVKVDVADNNQVII 776
>gi|147676618|ref|YP_001210833.1| ATPase with chaperone activity, ATP-binding subunit [Pelotomaculum
thermopropionicum SI]
gi|146272715|dbj|BAF58464.1| ATPase with chaperone activity, ATP-binding subunit [Pelotomaculum
thermopropionicum SI]
Length = 810
Score = 337 bits (864), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 164/283 (57%), Positives = 208/283 (73%), Gaps = 10/283 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FGS++AMVRIDMSEYMEK
Sbjct: 524 AIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEVLFGSEDAMVRIDMSEYMEKFA 583
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEAVR RP++V+L DEIEKAH DV N++LQ+++DGR+TD
Sbjct: 584 VSRLVGAPPGYVGYEEGGQLTEAVRRRPYTVVLLDEIEKAHPDVFNILLQVMEDGRLTDA 643
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---SDQMERG-------VAEELRRRFRPEF 171
KG+TVD +NT+IIMTSN+G I RE+ LG DQ E+G V EELRR FRPEF
Sbjct: 644 KGRTVDFRNTVIIMTSNVGIQTIKREATLGFRTGDQKEKGYEAMKSKVMEELRRTFRPEF 703
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNR+DE+IVF L + EIVD+MLKE+ R++ +E+ VT K L +EG++ +YG
Sbjct: 704 LNRVDEIIVFHALTPEHIREIVDLMLKEVAARMKENEIEIEVTDAAKDLLAKEGFDEAYG 763
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
ARPLRRA+ R++ED L+E L G + GD V +D D G I+
Sbjct: 764 ARPLRRAVQRMVEDRLSEDFLKGVFKRGDRVQIDSDGSGLTIL 806
>gi|218437024|ref|YP_002375353.1| ATPase AAA [Cyanothece sp. PCC 7424]
gi|218169752|gb|ACK68485.1| ATPase AAA-2 domain protein [Cyanothece sp. PCC 7424]
Length = 792
Score = 337 bits (863), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 168/277 (60%), Positives = 213/277 (76%), Gaps = 13/277 (4%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DPNRPI+SF+F GPTGVGKTELA ALA FG+ +AM+R+DMSE+ME HTVSK GS
Sbjct: 500 GMKDPNRPIASFVFAGPTGVGKTELAKALATFLFGAADAMIRLDMSEFMEPHTVSKLIGS 559
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGY+G++ GGQLTEAVR +P++VILFDEIEKAH DV N +LQLLDDGR+TD KG+TVD
Sbjct: 560 PPGYIGYDEGGQLTEAVRRKPYTVILFDEIEKAHPDVFNTLLQLLDDGRLTDAKGRTVDF 619
Query: 129 KNTIIIMTSNIGDSVIAR-ESILG---SDQMERG--------VAEELRRRFRPEFLNRID 176
KNT+IIMTSNIG VI + LG SD ++ V EE++ FRPEFLNR+D
Sbjct: 620 KNTLIIMTSNIGSKVIEKGGGGLGFAISDDIDESQYNYVRNLVTEEMKNYFRPEFLNRLD 679
Query: 177 EVIVFRQLNKMQLMEIVDIMLKEIYERL-EAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
E+IVFRQL K ++ EI DI+L+EI +L E +++ L VT FK+ +++EGY+PSYGARPL
Sbjct: 680 EIIVFRQLTKNEVKEIADILLQEIAIQLKEQRDISLDVTEQFKELVVKEGYDPSYGARPL 739
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
RRAI R LED+LAE IL G ++ GD++ +D D G V
Sbjct: 740 RRAIMRRLEDSLAEAILAGQVRDGDNIIIDADDQGQV 776
>gi|443327349|ref|ZP_21055976.1| ATPase with chaperone activity, ATP-binding subunit [Xenococcus sp.
PCC 7305]
gi|442793055|gb|ELS02515.1| ATPase with chaperone activity, ATP-binding subunit [Xenococcus sp.
PCC 7305]
Length = 787
Score = 336 bits (862), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 167/286 (58%), Positives = 212/286 (74%), Gaps = 13/286 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
L R+R GI DPNRPI+SF+F+GPTGVGKTELA +LA FGS++AMVR+DMSE+ME HT
Sbjct: 489 ALRRSRSGIGDPNRPIASFIFSGPTGVGKTELAKSLAITMFGSEDAMVRVDMSEFMESHT 548
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPG+VG++ GGQLTEA+R +P+SVILFDEIEKAH DV N+ LQLLDDGR+TD
Sbjct: 549 VSKLIGSPPGFVGYDEGGQLTEAIRRKPYSVILFDEIEKAHPDVFNIFLQLLDDGRLTDA 608
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESI-----LGSDQMERG-------VAEELRRRFRP 169
+G+ V+ KNTIIIMTSNIG I + L DQ E V +EL+ FRP
Sbjct: 609 QGRVVNFKNTIIIMTSNIGAKAIEKGGTGLGFDLIDDQAEAAYQKIRSRVNDELKNYFRP 668
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEA-KNMELTVTHTFKKKLIEEGYNP 228
EFLNR+DEVIVFRQL K ++ +I DI+L EI +RL+A + + L ++ F++K+I EG++P
Sbjct: 669 EFLNRLDEVIVFRQLTKPEVSQIADILLTEISQRLQAQREITLEISDAFREKVITEGFDP 728
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
+YGARPLRRAI RLLED+LAE IL+G + D +D VI+
Sbjct: 729 AYGARPLRRAIMRLLEDSLAEAILSGQVNDSDRALVDVAENDKVIV 774
>gi|443315779|ref|ZP_21045253.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 6406]
gi|442784616|gb|ELR94482.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 6406]
Length = 824
Score = 336 bits (861), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 160/295 (54%), Positives = 217/295 (73%), Gaps = 13/295 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+RV + P+RPI+S +F+GPTGVGKTEL ALA FGS+EAM+R+DMSE+ME HT
Sbjct: 527 AIRRSRVNLSSPDRPIASLIFSGPTGVGKTELTKALAMALFGSEEAMIRLDMSEFMEPHT 586
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V+K GSPPG+VG+E GGQLTEAVR +P++V+L DEIEKAH DV N++LQLL+DGR+TD
Sbjct: 587 VAKLLGSPPGFVGYEEGGQLTEAVRRKPYAVVLMDEIEKAHPDVFNILLQLLEDGRLTDA 646
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-ESILGSDQMERGVA------------EELRRRFR 168
KG+TV KNT+IIMTSNIG VI + LG D E A EE+++ FR
Sbjct: 647 KGRTVSFKNTLIIMTSNIGSRVIEKGGGGLGFDTSENDAATSQYQNIRNLVQEEMKQFFR 706
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PE LNR+DE+IVFRQL + ++ME+ D++L ++ +RL + +++++T FK++LI+EGY+
Sbjct: 707 PELLNRLDEIIVFRQLTRSEVMEVADLLLVQVNQRLAERQIQVSLTEAFKERLIQEGYDI 766
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMT 283
YGARP+RRAI RL+ED LAE IL IQ GD+VT+D D+ G V + R ++
Sbjct: 767 RYGARPMRRAISRLVEDGLAEAILRSDIQPGDTVTLDVDANGEVQVQPQRQPALA 821
>gi|126657055|ref|ZP_01728226.1| ATP-dependent Clp protease regulatory subunit [Cyanothece sp.
CCY0110]
gi|126621598|gb|EAZ92308.1| ATP-dependent Clp protease regulatory subunit [Cyanothece sp.
CCY0110]
Length = 788
Score = 336 bits (861), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 163/283 (57%), Positives = 216/283 (76%), Gaps = 13/283 (4%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
R+R+G+++P RPI+SF+F GPTGVGKTEL ALA FGSK+AM+R+DMSEYME+HTVSK
Sbjct: 493 RSRIGLQNPKRPIASFIFAGPTGVGKTELTKALAQFLFGSKDAMIRLDMSEYMERHTVSK 552
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+ PG++G+E GGQLTEAVR +P+SV+LFDEIEKAH DV N++LQLL+DGR+TD KG+
Sbjct: 553 LIGTAPGFIGYEEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNLLLQLLEDGRLTDSKGR 612
Query: 125 TVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRPEFL 172
TVD +NT+IIMTSN+G VI + E + +++ V +EL++ FRPEFL
Sbjct: 613 TVDFRNTLIIMTSNLGSKVIEKGGYNFGFETENDEENVQYKRIQEAVNDELKQHFRPEFL 672
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERL-EAKNMELTVTHTFKKKLIEEGYNPSYG 231
NR+DE+IVFRQL K ++ EI DI+L E+ ++L E + + LTV+ FK ++EEGY+PSYG
Sbjct: 673 NRLDEMIVFRQLTKPEVTEIADILLGEVAQQLYEQRQITLTVSDEFKGLVVEEGYDPSYG 732
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
ARPLRRAI R LED+LAE IL G IQ GD+V +D V++
Sbjct: 733 ARPLRRAIMRRLEDSLAESILAGNIQDGDTVNVDVSEDNQVMV 775
>gi|409991063|ref|ZP_11274359.1| ATPase [Arthrospira platensis str. Paraca]
gi|291567331|dbj|BAI89603.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Arthrospira
platensis NIES-39]
gi|409938081|gb|EKN79449.1| ATPase [Arthrospira platensis str. Paraca]
Length = 824
Score = 336 bits (861), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 161/283 (56%), Positives = 213/283 (75%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA+ +FGS EAM+R+DMSE+ME+HT
Sbjct: 522 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAYYFFGSVEAMIRLDMSEFMERHT 581
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPG+VG++ GGQLTEAVR RP++VILFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 582 VSKLIGSPPGFVGYDEGGQLTEAVRRRPYTVILFDEIEKAHPDVFNMLLQILEDGRLTDA 641
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS------------DQMERGVAEELRRRFRP 169
KG+TV KNT+IIMTSNIG VI + ++ V EEL++ FRP
Sbjct: 642 KGRTVSFKNTLIIMTSNIGSKVIEKGGGGLGFEFEESPEDAQYTRIRNLVNEELKQYFRP 701
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EF+NR+DE+IVFR+L K ++ +I DI+L+E++ RL K + L V+ FK ++E GY+P+
Sbjct: 702 EFINRLDEIIVFRKLTKDEVKQIADILLEEVFARLRDKEIVLEVSDRFKDHIVEVGYDPN 761
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRRAI LLED LAE +L+G ++ GD +D D G V
Sbjct: 762 YGARPLRRAIMNLLEDVLAETMLSGTLKPGDQALVDLDDDGQV 804
>gi|75271088|sp|Q53N47.1|CLPC4_ORYSJ RecName: Full=Chaperone protein ClpC4, chloroplastic; AltName:
Full=ATP-dependent Clp protease ATP-binding subunit ClpC
homolog 4; AltName: Full=Casein lytic proteinase C4;
Flags: Precursor
gi|62734338|gb|AAX96447.1| ATPase, AAA family, putative [Oryza sativa Japonica Group]
gi|77549763|gb|ABA92560.1| ATP-dependent Clp protease ATP-binding subunit clpA
CD4B,chloroplast precursor, putative, expressed [Oryza
sativa Japonica Group]
Length = 918
Score = 336 bits (861), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 160/282 (56%), Positives = 214/282 (75%), Gaps = 7/282 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKE----AMVRIDMSEYM 57
+ RAR+G++ P RP++S +F GPTGVGK+ELA ALA Y+GS E AMVR+DMSEYM
Sbjct: 631 AIRRARLGLKHPGRPVASLVFAGPTGVGKSELAKALAAYYYGSSESEEAAMVRLDMSEYM 690
Query: 58 EKHTVSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGR 117
EKH V++ GSPPGYV GGQLTEAVR RPH+V+L DE+EKAHRDV +++LQ+LDDGR
Sbjct: 691 EKHAVARLVGSPPGYVWHGEGGQLTEAVRRRPHAVVLLDEVEKAHRDVFDLLLQVLDDGR 750
Query: 118 VTDGKGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMER---GVAEELRRRFRPEFLNR 174
+TDGKG+TVD KNT+I+MT+NIG S+I G+ R V +E++R FRPEFLNR
Sbjct: 751 LTDGKGRTVDFKNTLIVMTTNIGSSLIVNNGGDGAAAAGRIKNTVTDEMKRHFRPEFLNR 810
Query: 175 IDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARP 234
+DEVI+F+ L ++++ +I IML+E R+ K ++L VT F++ ++EEG++PSYGARP
Sbjct: 811 LDEVIMFQPLTELEVGKIAGIMLEEFAGRVREKGIKLKVTDKFRELVVEEGFDPSYGARP 870
Query: 235 LRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYR 276
LRRA+ RLLED LAE +L G ++ GDSV +D DS GN ++ R
Sbjct: 871 LRRAVVRLLEDTLAEKMLAGEVREGDSVIVDADSAGNAVVRR 912
>gi|145356586|ref|XP_001422509.1| chaperone, Hsp100 family, ClpC-type [Ostreococcus lucimarinus
CCE9901]
gi|144582752|gb|ABP00826.1| chaperone, Hsp100 family, ClpC-type [Ostreococcus lucimarinus
CCE9901]
Length = 840
Score = 335 bits (860), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 162/279 (58%), Positives = 216/279 (77%), Gaps = 12/279 (4%)
Query: 8 VGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFG 67
G+++PNRP++SF+F+GPTGVGK+ELA +L+ YFGS+EAMVR+DMSE+ME+HTVSK G
Sbjct: 541 TGLKNPNRPVASFIFSGPTGVGKSELAKSLSAFYFGSEEAMVRLDMSEFMERHTVSKLIG 600
Query: 68 SPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVD 127
SPPGYVG+ GGQLTEAVR RP++++LFDEIEKAH DV N+MLQ+L+DGR+TD KG+ +D
Sbjct: 601 SPPGYVGYSEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRVID 660
Query: 128 LKNTIIIMTSNIGDSVIAR-ESILG-------SDQ----MERGVAEELRRRFRPEFLNRI 175
KNT+IIMTSN+G S I + LG DQ ++ V E+L+ FRPEFLNR+
Sbjct: 661 FKNTLIIMTSNVGASAIEKGGGGLGFQLDDNAEDQSYNRIKSLVMEDLKNYFRPEFLNRL 720
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
DE+IVFRQLNK ++ EI IML+ +++RL+ K + L T FK +L++EG++P+YGARPL
Sbjct: 721 DEIIVFRQLNKQEVREIAYIMLENVFKRLKEKEIVLECTERFKDRLVDEGFSPAYGARPL 780
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
RRAI RLLEDNL+E +LTG I G S MD ++ G + +
Sbjct: 781 RRAIMRLLEDNLSEKMLTGEISEGSSCIMDVNAEGEITV 819
>gi|434398661|ref|YP_007132665.1| ATPase AAA-2 domain protein [Stanieria cyanosphaera PCC 7437]
gi|428269758|gb|AFZ35699.1| ATPase AAA-2 domain protein [Stanieria cyanosphaera PCC 7437]
Length = 788
Score = 335 bits (859), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 161/281 (57%), Positives = 212/281 (75%), Gaps = 13/281 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
L RAR G+ PNRPI+SF+F+GPTGVGKTELA ALA FGS+ AM+R+DMSE+ME HT
Sbjct: 491 ALRRARAGLSSPNRPIASFIFSGPTGVGKTELAKALATYMFGSENAMIRLDMSEFMESHT 550
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGY+G++ GGQLTEA+R +P+S++LFDEIEKAH DV N++LQLLDDGR+TD
Sbjct: 551 VSKLIGSPPGYIGYDEGGQLTEAIRRQPYSLVLFDEIEKAHPDVFNLLLQLLDDGRLTDA 610
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
+G+ V+ N IIIMTSNIG VI + ++ Q+ V EEL++ FRP
Sbjct: 611 QGRVVNFNNAIIIMTSNIGSKVIEKGGTGLGFAVADNQTDAQYQQIRALVNEELKQYFRP 670
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEA-KNMELTVTHTFKKKLIEEGYNP 228
EFLNR+DE+IVFRQL K ++ +I +++L+EI +RL+ +++ L V+ F++K+I EG++P
Sbjct: 671 EFLNRLDEIIVFRQLTKPEVQQIAELLLQEIAQRLQQERSINLEVSEAFQEKVIAEGFDP 730
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
SYGARPLRRAI RLLED+LAE IL+G IQ GD + D G
Sbjct: 731 SYGARPLRRAIMRLLEDSLAEAILSGQIQDGDQALITVDDG 771
>gi|119488402|ref|ZP_01621575.1| ATP-dependent Clp protease regulatory subunit [Lyngbya sp. PCC
8106]
gi|119455213|gb|EAW36353.1| ATP-dependent Clp protease regulatory subunit [Lyngbya sp. PCC
8106]
Length = 828
Score = 335 bits (859), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 162/283 (57%), Positives = 213/283 (75%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAM+R+DMSE+ME+HT
Sbjct: 525 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEFMERHT 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGF+ GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 585 VSKLIGSPPGYVGFDEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDA 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESIL--------GSD----QMERGVAEELRRRFRP 169
KG+TV KNT++IMTSNIG VI + G D ++ V EEL++ FRP
Sbjct: 645 KGRTVSFKNTLLIMTSNIGSKVIEKGGGGLGFELGEPGEDLQYTRIRNLVNEELKQFFRP 704
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL + ++ I D+ML+E++ RL K M + V+ FK+ LIE GY+ +
Sbjct: 705 EFLNRLDEIIVFRQLEREEVRHIADLMLQEVFRRLREKGMTIEVSDKFKEHLIEVGYDRN 764
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARP+RRA+ LLED LAE +L+G + G+ +D D G V
Sbjct: 765 YGARPMRRAVMSLLEDALAEAMLSGLLTEGNHALVDMDEEGKV 807
>gi|308811204|ref|XP_003082910.1| Chaperone HSP104 and related ATP-dependent Clp proteases (ISS)
[Ostreococcus tauri]
gi|116054788|emb|CAL56865.1| Chaperone HSP104 and related ATP-dependent Clp proteases (ISS),
partial [Ostreococcus tauri]
Length = 781
Score = 335 bits (859), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 158/279 (56%), Positives = 214/279 (76%), Gaps = 12/279 (4%)
Query: 8 VGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFG 67
G+++PNRP++SF+F+GPTGVGK+ELA +L+ YFGS++AMVR+DMSE+ME+HTVSK G
Sbjct: 482 TGLKNPNRPVASFIFSGPTGVGKSELAKSLSSFYFGSEDAMVRLDMSEFMERHTVSKLIG 541
Query: 68 SPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVD 127
SPPGYVG+ GGQLTEAVR RP++++LFDEIEKAH DV N+MLQ+L+DGR+TD KG+ VD
Sbjct: 542 SPPGYVGYSEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRVVD 601
Query: 128 LKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRPEFLNRI 175
KNT+IIMTSN+G S I + ++++ V E+L+ FRPEFLNR+
Sbjct: 602 FKNTLIIMTSNVGASAIEKGGGGLGFQLDDNAEDQSYNRIKSLVMEDLKNYFRPEFLNRL 661
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
DE+IVFRQLNK ++ EI IML+ +++RL+ K + L T FK +L++EG++P+YGARPL
Sbjct: 662 DEIIVFRQLNKQEVREIAYIMLENVFKRLKEKEITLECTERFKDRLVDEGFSPAYGARPL 721
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
RRAI RLLEDNL+E +LTG I G S MD ++ G + +
Sbjct: 722 RRAIMRLLEDNLSEKMLTGEISEGSSCIMDVNAEGEITV 760
>gi|11467609|ref|NP_050661.1| Clp protease ATP binding subunit [Guillardia theta]
gi|5921798|sp|O78410.1|CLPC_GUITH RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA
homolog
gi|3602934|gb|AAC35595.1| Clp protease ATP binding subunit (chloroplast) [Guillardia theta]
Length = 819
Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 163/268 (60%), Positives = 205/268 (76%), Gaps = 12/268 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAMVR+DMSEYME+HT
Sbjct: 524 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALASYFFGSEEAMVRLDMSEYMERHT 583
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTE+VR RP++V+LFDEIEK H DV N++LQ+L+DGR+TD
Sbjct: 584 VSKLIGSPPGYVGYNEGGQLTESVRRRPYTVVLFDEIEKGHPDVFNLLLQILEDGRLTDS 643
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARES-----ILGSDQMERG-------VAEELRRRFRP 169
KG+TVD KNT++I+TSN+G VI + L DQ E V EEL++ FRP
Sbjct: 644 KGRTVDFKNTLLILTSNVGSKVIEKGGGGLGFDLSEDQTESQYGRIKALVNEELKQYFRP 703
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K ++ EI +IMLKE++ R+ K ++L VT FK LI EGYNP
Sbjct: 704 EFLNRLDEIIVFRQLTKDEVGEIAEIMLKEVFTRISEKGIQLEVTARFKTHLINEGYNPI 763
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQ 257
YGARPLRRA+ RLLED L+E L I+
Sbjct: 764 YGARPLRRAVMRLLEDTLSEEFLAEKIK 791
>gi|332981035|ref|YP_004462476.1| ATPase AAA-2 domain-containing protein [Mahella australiensis 50-1
BON]
gi|332698713|gb|AEE95654.1| ATPase AAA-2 domain protein [Mahella australiensis 50-1 BON]
Length = 815
Score = 334 bits (857), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 162/279 (58%), Positives = 210/279 (75%), Gaps = 11/279 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FG + AMVRIDMSEYMEK++
Sbjct: 524 AIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEAMFGDENAMVRIDMSEYMEKYS 583
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ GSPPGYVG+E GGQLTE VR +P++V+LFDEIEKAH DV N++LQ+L+DGR+TDG
Sbjct: 584 VSRLIGSPPGYVGYEEGGQLTEHVRRKPYTVVLFDEIEKAHPDVFNILLQILEDGRLTDG 643
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG-----------SDQMERGVAEELRRRFRPE 170
KG+TVD +NT+IIMTSN G +I ++ LG ++++ V EELRR FRPE
Sbjct: 644 KGRTVDFRNTVIIMTSNAGAHLITKQKSLGFSGGQDESKTEYEKIKDNVMEELRRTFRPE 703
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNR+DE+IVF L++ L IVD+MLK++ +RL KN+ + VT + L +EG++P Y
Sbjct: 704 FLNRVDEIIVFHPLDEENLRAIVDLMLKDVGKRLAEKNIYMEVTPAARDYLAKEGFDPIY 763
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
GARPLRRAI R++EDNL+E +L G I GDSV D ++G
Sbjct: 764 GARPLRRAIQRMVEDNLSEELLKGTIAPGDSVIADVENG 802
>gi|257057942|ref|YP_003135830.1| AAA ATPase [Cyanothece sp. PCC 8802]
gi|256588108|gb|ACU98994.1| ATPase AAA-2 domain protein [Cyanothece sp. PCC 8802]
Length = 789
Score = 334 bits (857), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 163/286 (56%), Positives = 218/286 (76%), Gaps = 17/286 (5%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RARVG+++P+RP++SF+F GPTGVGKTEL ALA FGS+EAM+R+DMSE+ME HTVSK
Sbjct: 495 RARVGLKNPHRPVASFIFAGPTGVGKTELTKALARYLFGSEEAMIRLDMSEFMEPHTVSK 554
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPG++G+E GGQLTEAVR +P+SVILFDEIEKAH D+ N++LQLL+DGR+TD KG+
Sbjct: 555 LIGSPPGFIGYEEGGQLTEAVRRKPYSVILFDEIEKAHPDIFNLLLQLLEDGRLTDAKGR 614
Query: 125 TVDLKNTIIIMTSNIGDSVIAR-------ESILGSDQMERG-------VAEELRRRFRPE 170
TV+ NT++IMTSNIG VI + ES SD E V EL++ FRPE
Sbjct: 615 TVNFNNTLVIMTSNIGSKVIEKGGSGFGFES--SSDHFEAQYQRLRDLVNNELKQYFRPE 672
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERL-EAKNMELTVTHTFKKKLIEEGYNPS 229
FLNR+D++IVFRQL K ++ EI D++L+E+ ++L E + + LTVT FK +++ EGY+PS
Sbjct: 673 FLNRLDDIIVFRQLTKSEVTEIADLLLQEVSKQLHEQRQITLTVTDGFKARVVSEGYDPS 732
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMY 275
YGARPLRRAI RLLED+LAE IL+G + GD++ + + V+++
Sbjct: 733 YGARPLRRAIMRLLEDSLAEAILSGKVHDGDTIKVGLNQQNEVLVH 778
>gi|30468134|ref|NP_849021.1| Clp protease ATP binding subunit [Cyanidioschyzon merolae strain
10D]
gi|30409234|dbj|BAC76183.1| ATP-dependent clp protease ATP-binding subunit (chloroplast)
[Cyanidioschyzon merolae strain 10D]
Length = 821
Score = 334 bits (856), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 164/279 (58%), Positives = 213/279 (76%), Gaps = 13/279 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS EAMVR+DMSEYME+HT
Sbjct: 526 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALASYFFGSNEAMVRLDMSEYMERHT 585
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTEAVR RP++VILFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 586 VSKLIGSPPGYVGYNEGGQLTEAVRKRPYTVILFDEIEKAHPDVFNILLQILEDGRLTDS 645
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS------------DQMERGVAEELRRRFRP 169
KG+TVD KNT++IMTSNIG +I + +++ V EEL++ FRP
Sbjct: 646 KGRTVDFKNTLLIMTSNIGSKIIEKGGGGLGFELGDSWQDTQYSRLKNLVNEELKQYFRP 705
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERL-EAKNMELTVTHTFKKKLIEEGYNP 228
EFLNRIDE+IVFRQL K ++ +I ++MLKE+Y+RL + + ++L VT FK+K+IEEGY+
Sbjct: 706 EFLNRIDEIIVFRQLTKEEVGQIAEMMLKEVYDRLAQQQQIQLQVTDRFKRKIIEEGYSA 765
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
+YGARPLRRAI + LED LAE +L + G + +D D
Sbjct: 766 TYGARPLRRAIMKWLEDPLAEHVLANTLSPGMTAVVDLD 804
>gi|218244917|ref|YP_002370288.1| ATPase AAA [Cyanothece sp. PCC 8801]
gi|218165395|gb|ACK64132.1| ATPase AAA-2 domain protein [Cyanothece sp. PCC 8801]
Length = 789
Score = 333 bits (855), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 163/286 (56%), Positives = 219/286 (76%), Gaps = 17/286 (5%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RARVG+++P+RP++SF+F GPTGVGKTEL ALA FGS+EAM+R+DMSE+ME HTVSK
Sbjct: 495 RARVGLKNPHRPVASFIFAGPTGVGKTELTKALARYLFGSEEAMIRLDMSEFMEPHTVSK 554
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPG++G+E GGQLTEAVR +P+SVILFDEIEKAH D+ N++LQLL+DGR+TD KG+
Sbjct: 555 LIGSPPGFIGYEEGGQLTEAVRRKPYSVILFDEIEKAHPDIFNLLLQLLEDGRLTDAKGR 614
Query: 125 TVDLKNTIIIMTSNIGDSVIAR-------ESILGSDQMERG-------VAEELRRRFRPE 170
TV+ NT++IMTSNIG VI + ES SD E V EL++ FRPE
Sbjct: 615 TVNFNNTLVIMTSNIGSKVIEKGGSGFGFES--SSDHFEAQYQRLRDLVNNELKQYFRPE 672
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERL-EAKNMELTVTHTFKKKLIEEGYNPS 229
FLNR+D++IVFRQL K ++ EI D++L+++ ++L E + + LTVT FK++++ EGY+PS
Sbjct: 673 FLNRLDDIIVFRQLTKPEVTEIADLLLQQVSKQLQEQRQITLTVTDGFKERVVSEGYDPS 732
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMY 275
YGARPLRRAI RLLED+LAE IL+G + GD++ + + VI++
Sbjct: 733 YGARPLRRAIMRLLEDSLAEAILSGKVHDGDTIKVGLNQQHEVIVH 778
>gi|149071968|ref|YP_001293474.1| Clp protease ATP binding subunit [Rhodomonas salina]
gi|134302919|gb|ABO70723.1| Clp protease ATP binding subunit [Rhodomonas salina]
Length = 819
Score = 333 bits (855), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 162/270 (60%), Positives = 207/270 (76%), Gaps = 12/270 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTEL ALA +FGS+EAMVR+DMSEYME+HT
Sbjct: 524 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALASYFFGSEEAMVRLDMSEYMERHT 583
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GGQLTE+VR RP++V+LFDEIEK H DV N++LQ+L+DGR+TD
Sbjct: 584 VSKLIGSPPGYVGYNEGGQLTESVRRRPYTVVLFDEIEKGHPDVFNLLLQILEDGRLTDS 643
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARES-----ILGSDQMERG-------VAEELRRRFRP 169
KG+TVD KNT++I+TSN+G VI + DQ + V EEL++ FRP
Sbjct: 644 KGRTVDFKNTLLILTSNVGSKVIEKGGGGLGFEFSEDQADSQYGRIKALVNEELKQYFRP 703
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL K ++ EI +IMLKE++ R+ K ++L VT FK LI+EGYNP
Sbjct: 704 EFLNRLDEIIVFRQLTKDEVGEIAEIMLKEVFTRISEKGIQLEVTARFKTHLIDEGYNPI 763
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVG 259
YGARPLRRA+ RLLED L+E L+ I+ G
Sbjct: 764 YGARPLRRAVMRLLEDTLSEEFLSEKIKEG 793
>gi|427708390|ref|YP_007050767.1| ATPase [Nostoc sp. PCC 7107]
gi|427360895|gb|AFY43617.1| ATPase AAA-2 domain protein [Nostoc sp. PCC 7107]
Length = 813
Score = 333 bits (855), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 165/282 (58%), Positives = 215/282 (76%), Gaps = 11/282 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+++PNRPI+SF+F+GPTGVGKTELA ALA +FG++EAM+R+DMSE+ME HT
Sbjct: 516 AIRRARVGLKNPNRPIASFIFSGPTGVGKTELAKALAAYFFGAEEAMIRLDMSEFMESHT 575
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG++ GGQLTEAVR +P++V+LFDEIEKAH DV N++LQ+LDDG++TD
Sbjct: 576 VSKLIGSPPGYVGYDEGGQLTEAVRRKPYTVLLFDEIEKAHPDVFNMLLQILDDGQLTDA 635
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-----------ESILGSDQMERGVAEELRRRFRPE 170
KG+ VD KNT+II+TSNIG VI + ++ ++ V EEL+ FRPE
Sbjct: 636 KGRRVDFKNTLIILTSNIGSKVIEKGGGGLGFEFDNQAEASYHRIRNLVNEELKTYFRPE 695
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNR+DE+IVF QL+K ++ EI +IML+++ RL K + L VT FK+ ++ EGYNPSY
Sbjct: 696 FLNRLDEIIVFTQLSKDEVKEIAEIMLRDVANRLTEKGITLEVTEAFKELVVNEGYNPSY 755
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
GARPLRRAI RLLED+LAE +L+G I GD+ D D G V
Sbjct: 756 GARPLRRAIMRLLEDSLAEALLSGEISNGDAAIADVDDDGQV 797
>gi|20808693|ref|NP_623864.1| chaperone ATPase [Thermoanaerobacter tengcongensis MB4]
gi|254478740|ref|ZP_05092109.1| ATPase, AAA family [Carboxydibrachium pacificum DSM 12653]
gi|20517331|gb|AAM25468.1| ATPases with chaperone activity, ATP-binding subunit
[Thermoanaerobacter tengcongensis MB4]
gi|214035305|gb|EEB76010.1| ATPase, AAA family [Carboxydibrachium pacificum DSM 12653]
Length = 816
Score = 333 bits (854), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 155/279 (55%), Positives = 212/279 (75%), Gaps = 11/279 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG++DP RPI SF+F GPTGVGKTEL+ ALA FG + AM+R+DMSEYME+HT
Sbjct: 525 AIRRARVGLKDPKRPIGSFIFLGPTGVGKTELSKALAEALFGDENAMIRLDMSEYMERHT 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGFE GGQLTE VR RP+SVIL DEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 585 VSKLIGSPPGYVGFEEGGQLTEKVRRRPYSVILLDEIEKAHPDVFNILLQILEDGRLTDS 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG-----------SDQMERGVAEELRRRFRPE 170
KG+TVD KNT+IIMTSN+G ++ +++ LG ++++ + ELR+ FRPE
Sbjct: 645 KGRTVDFKNTVIIMTSNVGAELLKKQTTLGFMPQEKEDKASFEKIKETLMAELRKTFRPE 704
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNR+DE+IVF L+K + +I DIM+KE+ +RLE N++L T K+++I++GY+P+Y
Sbjct: 705 FLNRVDEIIVFHPLSKEHIEKIADIMIKELNKRLEENNIKLEFTPEAKEEIIKQGYDPNY 764
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
GARPLRR I R++E+ L+E++L G ++ GD + + + G
Sbjct: 765 GARPLRRVIQRIVENQLSELMLQGEVKPGDELIVTAEDG 803
>gi|242624367|ref|YP_003002285.1| ATP-dependent clp protease ATP-binding subunit [Aureoumbra
lagunensis]
gi|239997475|gb|ACS36997.1| ATP-dependent clp protease ATP-binding subunit [Aureoumbra
lagunensis]
Length = 833
Score = 331 bits (848), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 162/281 (57%), Positives = 210/281 (74%), Gaps = 16/281 (5%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+R+PNRPI+SFLF+GPTGVGKTEL ALA +FG+++AMVR+DMSE+ME+HT
Sbjct: 530 AIRRARVGLRNPNRPIASFLFSGPTGVGKTELTKALALYFFGAEDAMVRLDMSEFMERHT 589
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V+K GSPPGYVG+ GGQLTEAVR +P++V+LFDE+EKAH DV N++LQ+L+DGR+TD
Sbjct: 590 VAKLIGSPPGYVGYSEGGQLTEAVRRKPYTVVLFDEVEKAHPDVFNLLLQILEDGRLTDS 649
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-ESILGS---------------DQMERGVAEELRR 165
KG+T+D KNT++I+TSNIG VI +S G D+M V EEL+R
Sbjct: 650 KGRTIDFKNTMLILTSNIGAKVIQENDSSSGDIGFGGNLVNGNDSSYDRMASLVNEELKR 709
Query: 166 RFRPEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEG 225
FRPEFLNR+DE+IVFRQL + L +I DIMLK++ +R E K+ L VT K LI EG
Sbjct: 710 FFRPEFLNRLDEIIVFRQLTRNDLSQIADIMLKQLCDRAEDKSFTLKVTQRAKLVLINEG 769
Query: 226 YNPSYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
+NP+YGARPLRRAI +LLED LA +L+ I+ G + +D
Sbjct: 770 FNPTYGARPLRRAIMKLLEDRLATQLLSESIEPGSMILVDS 810
>gi|67921848|ref|ZP_00515365.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal
[Crocosphaera watsonii WH 8501]
gi|67856440|gb|EAM51682.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal
[Crocosphaera watsonii WH 8501]
Length = 789
Score = 330 bits (847), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 161/286 (56%), Positives = 213/286 (74%), Gaps = 13/286 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR+G+++P RPI+SF+F GPTGVGKTEL ALA FGSK+AM+R+DMSEYME T
Sbjct: 491 AIRRARIGLQNPKRPIASFIFAGPTGVGKTELTKALAEFLFGSKDAMIRLDMSEYMEPQT 550
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK G+ PG+VG+E GGQLTEAVR +P+SV+LFDEIEKAH DV N++LQLL+DGR+TD
Sbjct: 551 VSKLIGTAPGFVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNLLLQLLEDGRLTDS 610
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD +NT++IMTSN+G VI + + + +++ V +EL++ FRP
Sbjct: 611 KGRTVDFRNTLVIMTSNLGSKVIEKGGYNFGFETENDDDNVNYKRIQEAVNDELKQYFRP 670
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERL-EAKNMELTVTHTFKKKLIEEGYNP 228
EFLNR+DE+IVFRQL K ++ EI DI+L E+ ++L E + + LTV+ FK + EEGY+P
Sbjct: 671 EFLNRLDEMIVFRQLTKSEVTEIADILLAEVAQQLHEQRQITLTVSDDFKALVAEEGYDP 730
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
SYGARPLRRAI R LED+LAE IL G IQ GD++ +D V +
Sbjct: 731 SYGARPLRRAIMRRLEDSLAESILAGNIQDGDTILVDVSEDKQVTI 776
>gi|416386179|ref|ZP_11684917.1| ATP-dependent Clp protease regulatory subunit [Crocosphaera
watsonii WH 0003]
gi|357264720|gb|EHJ13568.1| ATP-dependent Clp protease regulatory subunit [Crocosphaera
watsonii WH 0003]
Length = 789
Score = 330 bits (847), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 161/286 (56%), Positives = 213/286 (74%), Gaps = 13/286 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR+G+++P RPI+SF+F GPTGVGKTEL ALA FGSK+AM+R+DMSEYME T
Sbjct: 491 AIRRARIGLQNPKRPIASFIFAGPTGVGKTELTKALAEFLFGSKDAMIRLDMSEYMEPQT 550
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK G+ PG+VG+E GGQLTEAVR +P+SV+LFDEIEKAH DV N++LQLL+DGR+TD
Sbjct: 551 VSKLIGTAPGFVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNLLLQLLEDGRLTDS 610
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR------------ESILGSDQMERGVAEELRRRFRP 169
KG+TVD +NT++IMTSN+G VI + + + +++ V +EL++ FRP
Sbjct: 611 KGRTVDFRNTLVIMTSNLGSKVIEKGGYNFGFETENDDDNVNYKRIQEAVNDELKQYFRP 670
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERL-EAKNMELTVTHTFKKKLIEEGYNP 228
EFLNR+DE+IVFRQL K ++ EI DI+L E+ ++L E + + LTV+ FK + EEGY+P
Sbjct: 671 EFLNRLDEMIVFRQLTKSEVTEIADILLAEVAQQLHEQRQITLTVSDDFKALVAEEGYDP 730
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
SYGARPLRRAI R LED+LAE IL G IQ GD++ +D V +
Sbjct: 731 SYGARPLRRAIMRRLEDSLAESILAGNIQDGDTILVDVSEDKQVTI 776
>gi|254425327|ref|ZP_05039045.1| ATPase, AAA family [Synechococcus sp. PCC 7335]
gi|196192816|gb|EDX87780.1| ATPase, AAA family [Synechococcus sp. PCC 7335]
Length = 822
Score = 330 bits (846), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 162/281 (57%), Positives = 208/281 (74%), Gaps = 13/281 (4%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RARVG+R +RPI+S +F+GPTGVGKTELA ALA FGS+EAM+R+DMSE+ME HTVSK
Sbjct: 528 RARVGLRGLDRPIASLVFSGPTGVGKTELAKALASAVFGSEEAMIRLDMSEFMESHTVSK 587
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPG+VG++ GGQLTEAVR RP+SVIL DEIEKAH DV N++LQ+LDDG ++D KG+
Sbjct: 588 LIGSPPGFVGYDEGGQLTEAVRRRPYSVILMDEIEKAHPDVFNILLQVLDDGHLSDSKGR 647
Query: 125 TVDLKNTIIIMTSNIGDSVIAR-----------ESILGS--DQMERGVAEELRRRFRPEF 171
V KNT+IIMTSNIG VI + E + S + + V EE+++ FRPE
Sbjct: 648 EVSFKNTLIIMTSNIGSKVIEKGGGGLGFELTEEDSMTSRYNNIRNLVNEEMKQFFRPEM 707
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
+NRIDE+IVFRQL K ++ EI +I+LK++ ERL +N+ +T FK +L+EEGY+ YG
Sbjct: 708 INRIDEIIVFRQLTKAEVKEIAEILLKQVGERLGDRNLSFDMTEAFKDRLVEEGYDQRYG 767
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
ARP+RRAI RL+ED LAE IL G +Q GD+V D D G +
Sbjct: 768 ARPMRRAISRLVEDRLAEAILAGTLQDGDTVVFDIDKDGEI 808
>gi|427418168|ref|ZP_18908351.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 7375]
gi|425760881|gb|EKV01734.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 7375]
Length = 817
Score = 330 bits (845), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 157/290 (54%), Positives = 212/290 (73%), Gaps = 13/290 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+R RPI+SF+F GPTGVGKTEL ALA FG+++A++R+DMSEYME +
Sbjct: 521 AIRRARVGLRSEQRPIASFIFCGPTGVGKTELTKALADIVFGAEDAIIRLDMSEYMEPQS 580
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V+K GSPPGYVG+ +GGQLTEAVR +P++V+LFDEIEKAH DV N++LQLLDDGR+TD
Sbjct: 581 VAKLIGSPPGYVGYGDGGQLTEAVRRKPYTVVLFDEIEKAHPDVFNLLLQLLDDGRLTDS 640
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESI----------LGSDQMERG---VAEELRRRFR 168
+G+ VD KNT+IIMTSNIG I ++ L + Q R V + L+ FR
Sbjct: 641 QGRVVDFKNTVIIMTSNIGSRAIEKQGTGIGFDMIDGDLATAQYNRTREQVNDALKSSFR 700
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNR+DE+IVF QL + ++ +I DI+L+++ +RL + +++ VT FK KL+ EGY+P
Sbjct: 701 PEFLNRLDEIIVFHQLKRSEVKQIADILLQDVAKRLVEQAIKIEVTEAFKDKLVVEGYDP 760
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHR 278
SYGARPLRRAI RL+ED+LAE +L G I+ G++ +D + G V + R R
Sbjct: 761 SYGARPLRRAITRLVEDSLAEALLAGDIRAGETAVLDVNDDGQVTVQRKR 810
>gi|443320270|ref|ZP_21049382.1| ATPase with chaperone activity, ATP-binding subunit [Gloeocapsa sp.
PCC 73106]
gi|442790005|gb|ELR99626.1| ATPase with chaperone activity, ATP-binding subunit [Gloeocapsa sp.
PCC 73106]
Length = 782
Score = 329 bits (844), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 159/291 (54%), Positives = 208/291 (71%), Gaps = 13/291 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
L R R G++ P RPI+S F+GPTGVGKTEL+ A+A FG+ A++R+DMSEYME HT
Sbjct: 479 ALRRTRAGLKAPQRPIASLFFSGPTGVGKTELSKAIAQAMFGAANALIRLDMSEYMESHT 538
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGY+G++ GGQLTEA+R RP+ V+LFDEIEKAH DV N++LQLLDDGR+TD
Sbjct: 539 VSKLIGSPPGYIGYDEGGQLTEAIRRRPYGVVLFDEIEKAHPDVFNLLLQLLDDGRLTDA 598
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-------ESILGS-----DQMERGVAEELRRRFRP 169
KG+TVD NT++IMTSN+G I + +S+ S Q+ V EEL++ FRP
Sbjct: 599 KGRTVDFSNTLVIMTSNLGSKAIEKGGMSLGFQSLDNSGETQYQQLRNLVNEELKQFFRP 658
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKN-MELTVTHTFKKKLIEEGYNP 228
EFLNR+DE+IVFRQL Q+ EI ++ L+EI +R++ ++ + L+VT FK + +GY P
Sbjct: 659 EFLNRLDEIIVFRQLTLPQIKEIAELQLREISDRMQLEHQISLSVTEAFKDLAVAQGYQP 718
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRN 279
SYGARPLRRA+ RLLED+LAE IL+G IQ GD +D D V + R
Sbjct: 719 SYGARPLRRALTRLLEDSLAEAILSGIIQAGDIALVDVDEQNQVTVSPQRT 769
>gi|242077887|ref|XP_002443712.1| hypothetical protein SORBIDRAFT_07g000710 [Sorghum bicolor]
gi|241940062|gb|EES13207.1| hypothetical protein SORBIDRAFT_07g000710 [Sorghum bicolor]
Length = 419
Score = 329 bits (844), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 157/281 (55%), Positives = 213/281 (75%), Gaps = 5/281 (1%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+ G+ +P RPI SF+F GPTGVGKTELA A+A Y+GS+ AM+R+DMSE+M +++
Sbjct: 139 AIRRSHAGLNEPCRPIGSFMFAGPTGVGKTELAKAVAAFYYGSEAAMIRLDMSEFMNRYS 198
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ GS PGY+ NGGQLTEAVR RPH++ILFDE+EKAH DV NVMLQ+LDDGR+TDG
Sbjct: 199 VSRLIGSAPGYIDDSNGGQLTEAVRRRPHTLILFDEVEKAHPDVFNVMLQILDDGRLTDG 258
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARE----SILGSDQMERGVAEELRRRFRPEFLNRIDE 177
KG+TVD KNT+I+MTSNIG ++ + +G D+++ V EE++R FRPEFLNR+DE
Sbjct: 259 KGRTVDFKNTLIVMTSNIGGDIVVANGGDGAGVGYDRIKDMVGEEMKRHFRPEFLNRLDE 318
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
IVFRQL K+++ +I IML+ + R K ++L VT F+ +++EG++ SYG RPL+R
Sbjct: 319 TIVFRQLTKVEVKKIAGIMLENVAARGRKKGIKLQVTDRFRDLVVDEGFDTSYGVRPLKR 378
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHR 278
AI RLLED LA+ +L G I+ GDSV +D D GNV+ +RH+
Sbjct: 379 AIQRLLEDTLADKMLAGEIKDGDSVAVDADLTGNVV-FRHQ 418
>gi|347751623|ref|YP_004859188.1| ATPase AAA [Bacillus coagulans 36D1]
gi|347584141|gb|AEP00408.1| ATPase AAA-2 domain protein [Bacillus coagulans 36D1]
Length = 816
Score = 328 bits (842), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 158/275 (57%), Positives = 200/275 (72%), Gaps = 10/275 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+RIDMSEYMEKH+ S+
Sbjct: 525 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEAMFGDEDAMIRIDMSEYMEKHSTSR 584
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPGYVGFE GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+LDDGR+TD KG+
Sbjct: 585 LVGSPPGYVGFEEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGR 644
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEFLNR 174
TVD NTI+IMTSN+G + R +G M+ V EEL++ FRPEFLNR
Sbjct: 645 TVDFSNTIVIMTSNVGADALKRNKSVGFTIQDTVEADYKDMKDKVLEELKKAFRPEFLNR 704
Query: 175 IDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARP 234
+DE IVF L K QL EIV +M KE+ +RL+ ++EL +T K+K+ E+GY+P YGARP
Sbjct: 705 VDETIVFHSLEKKQLNEIVTLMAKELSDRLKEHHIELVLTDAAKEKVAEKGYDPEYGARP 764
Query: 235 LRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
LRR+I + +ED L+E +L G I+ G V +D G
Sbjct: 765 LRRSIQKNIEDRLSEEMLKGNIKEGQKVLVDVKDG 799
>gi|403388307|ref|ZP_10930364.1| negative regulator of genetic competence mecB/clpC [Clostridium sp.
JC122]
Length = 809
Score = 328 bits (842), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 155/275 (56%), Positives = 209/275 (76%), Gaps = 11/275 (4%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RARVG++DP RPI SF+F GPTGVGKTEL ALA FG + ++RIDMSEYMEKH+VSK
Sbjct: 527 RARVGLKDPKRPIGSFIFLGPTGVGKTELTKALAQAMFGDENNLIRIDMSEYMEKHSVSK 586
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVGF+ GGQLTE VR P+SVILFDEIEKAH DV N +LQ+L+DGR+TDGKG+
Sbjct: 587 LIGAPPGYVGFDEGGQLTEKVRRNPYSVILFDEIEKAHPDVFNALLQILEDGRLTDGKGK 646
Query: 125 TVDLKNTIIIMTSNIGDSVIARESIL-----------GSDQMERGVAEELRRRFRPEFLN 173
TV+ KNTIIIMTSN+G S I +++ + G ++M+ + E+L+ FRPEFLN
Sbjct: 647 TVNFKNTIIIMTSNVGASDIKKQNTIGFAKNSLEASTGHEKMKENIMEKLKLTFRPEFLN 706
Query: 174 RIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGAR 233
RID++IVF +LN+ L++IV++ML + +RL+ +N+ + ++ K+ L +EG++P+YGAR
Sbjct: 707 RIDDIIVFHKLNESDLLKIVELMLNVLSDRLQQQNINIKFSNEAKEFLAKEGFDPTYGAR 766
Query: 234 PLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDS 268
PLRRAI +++ED LAE IL G + GDSV + D+
Sbjct: 767 PLRRAITKIIEDKLAEEILKGNVNTGDSVIVTVDN 801
>gi|332982904|ref|YP_004464345.1| ATPase AAA-2 domain-containing protein [Mahella australiensis 50-1
BON]
gi|332700582|gb|AEE97523.1| ATPase AAA-2 domain protein [Mahella australiensis 50-1 BON]
Length = 855
Score = 328 bits (842), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 156/270 (57%), Positives = 204/270 (75%), Gaps = 2/270 (0%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DPNRPI SF+F GPTGVGKTELA ALA FG ++AM+RIDMSEYMEKHTVS+
Sbjct: 583 RARTGLKDPNRPIGSFIFLGPTGVGKTELARALAEFLFGDEDAMIRIDMSEYMEKHTVSR 642
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG E GGQLTEAVR +P+SV+LFDEIEKAH DV N++LQ+LDDGR+TD G+
Sbjct: 643 LIGAPPGYVGHEEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNILLQILDDGRLTDSHGK 702
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVFRQL 184
TVD KNT+IIMTSNIG ++ G +++E+ + EEL+R FRPEFLNRIDE+I+F L
Sbjct: 703 TVDFKNTVIIMTSNIGARYF--QAGYGKEELEKLIHEELQRNFRPEFLNRIDEIIIFHGL 760
Query: 185 NKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGRLLE 244
K + IVD+ML+++ ++L + MEL VT K + +EGY+P +GARPLRR I R LE
Sbjct: 761 EKEHMRAIVDLMLEKVRQQLRGQGMELEVTDKAKDYIAQEGYDPQFGARPLRRFIRRQLE 820
Query: 245 DNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
+ ++ +IL G + GD + +D D ++
Sbjct: 821 NEISNMILKGDFKDGDKILVDLDEDNKLVF 850
>gi|428779009|ref|YP_007170795.1| chaperone ATPase [Dactylococcopsis salina PCC 8305]
gi|428693288|gb|AFZ49438.1| ATPase with chaperone activity, ATP-binding subunit
[Dactylococcopsis salina PCC 8305]
Length = 793
Score = 328 bits (840), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 162/285 (56%), Positives = 211/285 (74%), Gaps = 12/285 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG++D +RPI+SF+F+GPTGVGKTEL ALA FG +EAM+R+DMSEYM+ +
Sbjct: 496 AIRRARVGMKDRDRPIASFIFSGPTGVGKTELTKALAQYLFGDEEAMIRLDMSEYMDPQS 555
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPG+VG+E GGQLTE +R RP++V+LFDEIEKAH DV N MLQ+LD+G +TD
Sbjct: 556 VSKLIGSPPGFVGYEEGGQLTEQIRRRPYTVVLFDEIEKAHPDVFNSMLQILDEGHLTDA 615
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-ESILGSDQMERG----------VAEELRRRFRPE 170
KG+ VD KNT++IMTSNIG I + LG + E G V EE++ FRPE
Sbjct: 616 KGRQVDFKNTLLIMTSNIGSKAIEKGGGGLGFELNEEGEGSYTRIRNRVQEEMKNYFRPE 675
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLE-AKNMELTVTHTFKKKLIEEGYNPS 229
FLNR+DEVIVFRQL K ++ EI D++LKEI RL+ + +EL V+ FK ++I EGY+ S
Sbjct: 676 FLNRVDEVIVFRQLQKEEVGEIADLLLKEISTRLQDQQGVELKVSDGFKDRVINEGYDAS 735
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
YGARPLRR + RLLEDNLA+ IL+G + GD+ +D D GN+++
Sbjct: 736 YGARPLRRVLMRLLEDNLAQAILSGELSEGDTAYVDTDEDGNILI 780
>gi|365157357|ref|ZP_09353630.1| chaperone ClpB [Bacillus smithii 7_3_47FAA]
gi|363625258|gb|EHL76300.1| chaperone ClpB [Bacillus smithii 7_3_47FAA]
Length = 811
Score = 327 bits (839), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 157/282 (55%), Positives = 207/282 (73%), Gaps = 9/282 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+RIDMSEYMEKH+ S+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEAMFGDEDAMIRIDMSEYMEKHSTSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPGYVGFE GGQLTE VR +P+SVIL DEIEKAH DV N++LQ+L+DGR+TD KG+
Sbjct: 586 LVGSPPGYVGFEEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSD---------QMERGVAEELRRRFRPEFLNRI 175
TVD +NT++IMTSN+G + + +G + M+ V EEL+R FRPEFLNRI
Sbjct: 646 TVDFRNTVLIMTSNVGAEALKKNKYVGFNIQDGEQEFKDMKGKVLEELKRAFRPEFLNRI 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
DE+IVF L K QL +IV +M ++ +RL+ +++EL +T K+K+ EEGY+P YGARPL
Sbjct: 706 DEIIVFHSLEKDQLKQIVSLMSDQLTKRLKEQHIELELTDKAKEKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRH 277
RRAI + +ED L+E +L G I G +V +D ++ V+ +
Sbjct: 766 RRAIQKHIEDRLSEELLKGNIHPGQNVVIDVENNEFVVKTKQ 807
>gi|328953205|ref|YP_004370539.1| ATP-dependent chaperone ClpB [Desulfobacca acetoxidans DSM 11109]
gi|328453529|gb|AEB09358.1| ATP-dependent chaperone ClpB [Desulfobacca acetoxidans DSM 11109]
Length = 858
Score = 327 bits (839), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 155/269 (57%), Positives = 205/269 (76%), Gaps = 2/269 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR GI+DPNRP+ SF+F GPTGVGKTELA ALA F S++AM+R+DMSEYMEKHT
Sbjct: 586 AVRRARSGIQDPNRPMGSFIFMGPTGVGKTELARALAEFLFDSEQAMIRLDMSEYMEKHT 645
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEAVR RP+SVILFDEIEKAH +V + +LQ+LDDGR+TDG
Sbjct: 646 VSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPEVFDALLQILDDGRMTDG 705
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVF 181
G+TVD KNTI+IMTSNIG I + ++M R V E LR F+PEFLNR+D++I+F
Sbjct: 706 HGRTVDFKNTILIMTSNIGSQYIM--EVTDEEEMRRKVMEALRFHFKPEFLNRVDDIIIF 763
Query: 182 RQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGR 241
+L+K L +IVD+ ++++ RLE + L +T + L E G++P YGARPLRRAI R
Sbjct: 764 HRLDKAHLRQIVDLQVQKLVRRLEEHGIRLELTDRARDFLAEAGFDPVYGARPLRRAIQR 823
Query: 242 LLEDNLAEIILTGYIQVGDSVTMDCDSGG 270
++D+LA+++L+G GD+V +D D+ G
Sbjct: 824 QVQDSLAKLMLSGEFIEGDTVQIDADAAG 852
>gi|440753865|ref|ZP_20933067.1| clp amino terminal domain protein [Microcystis aeruginosa TAIHU98]
gi|440174071|gb|ELP53440.1| clp amino terminal domain protein [Microcystis aeruginosa TAIHU98]
Length = 795
Score = 327 bits (838), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 157/289 (54%), Positives = 212/289 (73%), Gaps = 12/289 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARV +++PNRPI+SF+F GPTGVGKTEL ALA FGS+ +M+R+DMSE+ME HT
Sbjct: 490 AIRRARVNLKNPNRPIASFIFAGPTGVGKTELTKALAKLLFGSESSMIRLDMSEFMESHT 549
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK G+PPGY+G+ GGQLTEAVR +P+ V+LFDEIEKAH DV N++LQLL+DGR+TD
Sbjct: 550 VSKLIGAPPGYIGYNEGGQLTEAVRRQPYRVVLFDEIEKAHPDVFNLLLQLLEDGRLTDS 609
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-ESILGSD-----------QMERGVAEELRRRFRP 169
+G+ VD KNT+IIMTSNIG VI + + LG + Q+ V EEL++ FRP
Sbjct: 610 QGRRVDFKNTLIIMTSNIGSKVIEKGGNSLGFEMADDFAQSRYQQISNRVTEELKQYFRP 669
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL + ++ +I DI++ ++ ++L K + + VT FK +I EGY+PS
Sbjct: 670 EFLNRLDEIIVFRQLTREEVTQIADILIADLAKQLTEKGISVQVTAAFKDLVINEGYDPS 729
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHR 278
YGARPLRRA+ R LED+LAE +L+G + GD +D + G V + H+
Sbjct: 730 YGARPLRRALTRRLEDSLAEAMLSGKVNSGDHAILDVTADGVVTVSSHQ 778
>gi|336112769|ref|YP_004567536.1| ATPase AAA-2 domain-containing protein [Bacillus coagulans 2-6]
gi|335366199|gb|AEH52150.1| ATPase AAA-2 domain protein [Bacillus coagulans 2-6]
Length = 816
Score = 326 bits (836), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 157/275 (57%), Positives = 199/275 (72%), Gaps = 10/275 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+RIDMSEYMEKH+ S+
Sbjct: 525 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEAMFGDEDAMIRIDMSEYMEKHSTSR 584
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPGYVGFE GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+LDDGR+TD KG+
Sbjct: 585 LVGSPPGYVGFEEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGR 644
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEFLNR 174
TVD NTI+IMTSN+G + R +G M+ V EEL++ FRPEFLNR
Sbjct: 645 TVDFSNTIVIMTSNVGADALKRNKSVGFTIQDTVEADYKDMKDKVLEELKKAFRPEFLNR 704
Query: 175 IDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARP 234
+DE IVF L K L EIV +M KE+ +RL+ ++EL +T K+K+ E+GY+P YGARP
Sbjct: 705 VDETIVFHSLEKKHLNEIVTLMAKELSDRLKEHHIELVLTDAAKEKVAEKGYDPEYGARP 764
Query: 235 LRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
LRR+I + +ED L+E +L G I+ G V +D G
Sbjct: 765 LRRSIQKNIEDRLSEEMLKGNIKEGQKVLVDVKDG 799
>gi|226309775|ref|YP_002769669.1| negative regulator of genetic competence [Brevibacillus brevis NBRC
100599]
gi|226092723|dbj|BAH41165.1| negative regulator of genetic competence [Brevibacillus brevis NBRC
100599]
Length = 815
Score = 326 bits (836), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 153/281 (54%), Positives = 209/281 (74%), Gaps = 9/281 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA A+A FG ++AM+R+DMSEYMEKH+
Sbjct: 527 AIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARAVAETLFGDEDAMIRVDMSEYMEKHS 586
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
++ G+PPGYVGF+ GGQLTE VR +P+SVIL DEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 587 TARLVGAPPGYVGFDEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDS 646
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+TVD +NT++IMTSN+G S+I + + LG M+ V +EL++ FRPEFL
Sbjct: 647 KGRTVDFRNTVVIMTSNVGASMIKKNTTLGFTTNDSERKYQDMKDKVMDELKKSFRPEFL 706
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDEVIVF L + + +IV +M E+ +RL+ ++++ +T KK L +EG++P+YGA
Sbjct: 707 NRIDEVIVFHSLEQEHIEQIVTLMTDELRKRLKEQDIDFQLTEEAKKVLAKEGFDPAYGA 766
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
RPLRRAI R +EDNL+E +L G I GD+V ++ + G V+
Sbjct: 767 RPLRRAIQRHIEDNLSEELLKGTISKGDTVNIEAEEGKLVV 807
>gi|403238378|ref|ZP_10916964.1| Class III stress response-related ATPase, ClpC [Bacillus sp.
10403023]
Length = 814
Score = 326 bits (835), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 157/278 (56%), Positives = 204/278 (73%), Gaps = 9/278 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
R+R G++DP RP SF+F GPTGVGKTELA ALA FG ++AM+R+DMSEYMEKH+ S+
Sbjct: 527 RSRAGLKDPKRPTGSFIFLGPTGVGKTELARALAESIFGDEDAMIRVDMSEYMEKHSTSR 586
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPGYVG+E GGQLTE VR +P+SVIL DEIEKAH DV N++LQ+L+DGR+TD KG+
Sbjct: 587 LVGSPPGYVGYEEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGR 646
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG---SDQ------MERGVAEELRRRFRPEFLNRI 175
TVD +NTI+IMTSN+G S + R +G D+ M+ V EEL++ FRPEFLNRI
Sbjct: 647 TVDFRNTILIMTSNVGASTLKRNKYVGFAMEDEKQDYRNMKDKVMEELKKAFRPEFLNRI 706
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
DE+IVF L K L EIV +M ++ +RL+ ++ EL +T K ++ EEGY+P YGARPL
Sbjct: 707 DEIIVFHSLEKKHLKEIVTLMADQLTKRLKEQDFELELTEAAKDQIAEEGYDPDYGARPL 766
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
RRAI + +ED L+E +L G I+ G + MD +G VI
Sbjct: 767 RRAIQKQIEDRLSEELLRGNIEKGKKIVMDFKNGEFVI 804
>gi|425457129|ref|ZP_18836835.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9807]
gi|389801614|emb|CCI19250.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9807]
Length = 795
Score = 326 bits (835), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 157/289 (54%), Positives = 211/289 (73%), Gaps = 12/289 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARV +++PNRPI+SF+F GPTGVGKTEL ALA FGS+ +M+R+DMSE+ME HT
Sbjct: 490 AIRRARVNLKNPNRPIASFIFAGPTGVGKTELTKALAKLLFGSESSMIRLDMSEFMESHT 549
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK G+PPGY+G+ GGQLTEAVR +P+ V+LFDEIEKAH DV N++LQLL+DGR+TD
Sbjct: 550 VSKLIGAPPGYIGYNEGGQLTEAVRRQPYRVVLFDEIEKAHPDVFNLLLQLLEDGRLTDS 609
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-ESILGSD-----------QMERGVAEELRRRFRP 169
+G+ VD KNT+IIMTSNIG VI + + LG + Q+ V +EL++ FRP
Sbjct: 610 QGRRVDFKNTLIIMTSNIGSKVIEKGGNSLGFEIADDFAQSRYQQISNRVTDELKQYFRP 669
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL + ++ +I DI++ +I ++L K + + VT FK +I EGY+PS
Sbjct: 670 EFLNRLDEIIVFRQLTREEVTQIADILIADIAKQLTEKGISVEVTAAFKDLVINEGYDPS 729
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHR 278
YGARPLRRA+ R LED+LAE +L+G + GD +D + V + HR
Sbjct: 730 YGARPLRRALTRRLEDSLAEAMLSGKVNSGDHALLDVTAEAVVTVSSHR 778
>gi|387928140|ref|ZP_10130818.1| Class III stress response-related ATPase, ClpC [Bacillus
methanolicus PB1]
gi|387587726|gb|EIJ80048.1| Class III stress response-related ATPase, ClpC [Bacillus
methanolicus PB1]
Length = 814
Score = 326 bits (835), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 155/278 (55%), Positives = 204/278 (73%), Gaps = 9/278 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+RIDMSEYMEKH+ S+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEAMFGDEDAMIRIDMSEYMEKHSTSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPGYVG+E GGQLTE VR +P+SVIL DEIEKAH DV N++LQ+L+DGR+TD KG+
Sbjct: 586 LVGSPPGYVGYEEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSD---------QMERGVAEELRRRFRPEFLNRI 175
TVD +NT++IMTSN+G + R +G + M+ V EEL++ FRPEFLNRI
Sbjct: 646 TVDFRNTVLIMTSNVGAEALKRNKYVGFNIQDGEQDYKDMKGKVMEELKKAFRPEFLNRI 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
DE+IVF L K L EIV +M +++ +RL+ +++ L +T K+K+ EEGY+P YGARPL
Sbjct: 706 DEIIVFHALEKKHLREIVSLMAEQLMKRLKEQDIHLELTDAAKEKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
RRAI + +ED L+E +L G + G V +D + G V+
Sbjct: 766 RRAIQKHIEDRLSEELLKGAVLTGQRVVIDVEDGEFVV 803
>gi|326391133|ref|ZP_08212679.1| ATPase AAA-2 domain protein [Thermoanaerobacter ethanolicus JW 200]
gi|345018568|ref|YP_004820921.1| ATPase AAA-2 domain-containing protein [Thermoanaerobacter wiegelii
Rt8.B1]
gi|392939610|ref|ZP_10305254.1| ATPase with chaperone activity, ATP-binding subunit
[Thermoanaerobacter siderophilus SR4]
gi|325992832|gb|EGD51278.1| ATPase AAA-2 domain protein [Thermoanaerobacter ethanolicus JW 200]
gi|344033911|gb|AEM79637.1| ATPase AAA-2 domain protein [Thermoanaerobacter wiegelii Rt8.B1]
gi|392291360|gb|EIV99803.1| ATPase with chaperone activity, ATP-binding subunit
[Thermoanaerobacter siderophilus SR4]
Length = 816
Score = 326 bits (835), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 152/272 (55%), Positives = 205/272 (75%), Gaps = 11/272 (4%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTGVGKTEL ALA FG + AM+R+DMSEYME+HTVSK GS
Sbjct: 532 GLKDPKRPIGSFIFLGPTGVGKTELTKALAEALFGDENAMIRLDMSEYMERHTVSKLIGS 591
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVGFE GGQLTE VR +P+SVIL DEIEKAH DV N++LQ+L+DGR+TD KG+TVD
Sbjct: 592 PPGYVGFEEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQILEDGRLTDSKGRTVDF 651
Query: 129 KNTIIIMTSNIGDSVIARESILG-----------SDQMERGVAEELRRRFRPEFLNRIDE 177
KNT+IIMTSN+G ++ ++S LG D+++ + ELR+ FRPEFLNR+DE
Sbjct: 652 KNTVIIMTSNVGAELLKKQSTLGFMPQEKEDKASYDKIKETLMAELRKTFRPEFLNRVDE 711
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+IVF QL+K + +I DIM+KE+ RL+ N++L T K+++I++GY+P+YGARPLRR
Sbjct: 712 IIVFHQLSKEDIEKIADIMIKELNNRLKENNIKLEFTPEAKEEIIKQGYDPNYGARPLRR 771
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
I R++E+ L+E++L G ++ GD + + G
Sbjct: 772 VIQRIVENQLSELMLQGEVKPGDELIVTAKDG 803
>gi|337287439|ref|YP_004626912.1| ATP-dependent chaperone ClpB [Thermodesulfatator indicus DSM 15286]
gi|335360267|gb|AEH45948.1| ATP-dependent chaperone ClpB [Thermodesulfatator indicus DSM 15286]
Length = 872
Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 161/274 (58%), Positives = 203/274 (74%), Gaps = 3/274 (1%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DPNRPI SF+F GPTGVGKTELA ALA F ++EA++R DMSEYMEKH VSK
Sbjct: 590 RARAGLKDPNRPIGSFMFLGPTGVGKTELAKALAEFMFDTEEALIRFDMSEYMEKHAVSK 649
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E GGQLTEAVR RP+SVILFDEIEKAH DV N++LQ+LDDGR+TD KG+
Sbjct: 650 LIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSKGR 709
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVFRQL 184
TV+ +NTIIIMTSNIG + + ER V + +R FRPEFLNRIDE+I+F +L
Sbjct: 710 TVNFQNTIIIMTSNIGSHYVM--ELEDRKDAERLVMDAVRSHFRPEFLNRIDEIIIFNKL 767
Query: 185 NKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGRLLE 244
K QL +IVDI ++ + +RLE K++ + +T K+ L E GY+P YGARPL+RAI R +E
Sbjct: 768 TKEQLKKIVDIQIRYLQQRLEDKHITIELTDRAKEWLAEVGYDPVYGARPLKRAIQRYIE 827
Query: 245 DNLAEIILTGYIQVGDSVTMDCD-SGGNVIMYRH 277
D LA IL G Q GD + +D D + G + +H
Sbjct: 828 DPLAVKILEGTFQEGDHILVDYDETKGGLDFRKH 861
>gi|148269199|ref|YP_001243659.1| ATPase [Thermotoga petrophila RKU-1]
gi|281411497|ref|YP_003345576.1| ATPase AAA-2 domain protein [Thermotoga naphthophila RKU-10]
gi|147734743|gb|ABQ46083.1| ATPase AAA-2 domain protein [Thermotoga petrophila RKU-1]
gi|281372600|gb|ADA66162.1| ATPase AAA-2 domain protein [Thermotoga naphthophila RKU-10]
Length = 792
Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 156/268 (58%), Positives = 202/268 (75%), Gaps = 2/268 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ +AR GI+DPNRP+ +FLF GPTGVGKTELA LA FGS+ A++RIDM+EYMEKH
Sbjct: 509 AIRKARAGIKDPNRPVGTFLFLGPTGVGKTELAKTLAEVLFGSENALIRIDMTEYMEKHA 568
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK G+PPGYVG+E GGQLTEAVR RP+SV+L DEIEKAH DV NV+LQ++DDGR+TD
Sbjct: 569 VSKLIGAPPGYVGYEEGGQLTEAVRRRPYSVVLLDEIEKAHPDVFNVLLQIMDDGRLTDS 628
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS--DQMERGVAEELRRRFRPEFLNRIDEVI 179
KG VD KNTIIIMTSNI +I G D++E V EEL+ FRPEF+NRID V+
Sbjct: 629 KGNVVDFKNTIIIMTSNIASDLILNYVKEGKSFDEIEERVREELKHYFRPEFINRIDHVV 688
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF+ L K + +IV+IM++ + RL+ KN++LT+T + K+ L EEGY+P++GARPLRR I
Sbjct: 689 VFKPLTKEHMKQIVEIMIRRLEARLKDKNIKLTITESAKEYLAEEGYDPTFGARPLRRLI 748
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCD 267
R +E LA +I+ G +Q G +V +D +
Sbjct: 749 EREIETPLARMIIAGEVQEGQTVRVDYN 776
>gi|294496954|ref|YP_003560654.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
megaterium QM B1551]
gi|294346891|gb|ADE67220.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
megaterium QM B1551]
Length = 812
Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 156/278 (56%), Positives = 201/278 (72%), Gaps = 9/278 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+RIDMSEYMEKH+ S+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESIFGDEDAMIRIDMSEYMEKHSTSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPGYVG+E GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+L+DGR+TD KG+
Sbjct: 586 LVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFLNRI 175
TVD +NTI+IMTSN+G + R LG M+ V E++R FRPEFLNRI
Sbjct: 646 TVDFRNTILIMTSNVGADTLKRSKHLGFTVEAEGQDYKDMKGKVMAEMKRAFRPEFLNRI 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
DE+IVF L K L EIV +M ++ +RL+ + ++L +T K+ EEG++P YGARPL
Sbjct: 706 DEIIVFHSLEKPHLAEIVKLMADQLTKRLKEQEIDLELTKEAIDKIAEEGFDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
RRAI + +ED L+E +L G +Q G VT+D D G V+
Sbjct: 766 RRAIQKHIEDRLSEELLKGVVQKGQKVTLDVDKGEFVV 803
>gi|221632469|ref|YP_002521690.1| chaperone clpB 1 [Thermomicrobium roseum DSM 5159]
gi|221157168|gb|ACM06295.1| chaperone clpB 1 [Thermomicrobium roseum DSM 5159]
Length = 870
Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 158/273 (57%), Positives = 207/273 (75%), Gaps = 4/273 (1%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DPNRP+ SF+F GPTGVGKTELA ALA F + AMVRIDMSEY E+HT
Sbjct: 587 AIRRARAGLQDPNRPLGSFIFLGPTGVGKTELARALAEFLFDDERAMVRIDMSEYQERHT 646
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEAVR RP+SV+LFDEIEKAH +V NV+LQ+LDDGR+TDG
Sbjct: 647 VSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVVLFDEIEKAHPEVFNVLLQVLDDGRLTDG 706
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQME--RGVAEELRRRFRPEFLNRIDEVI 179
+G+TVD +NT+IIMTSN+G I +++L + E V + +R FRPEFLNRIDE+I
Sbjct: 707 QGRTVDFRNTVIIMTSNLGSEYI--QALLPHREEEAYERVMQAVRAHFRPEFLNRIDEII 764
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
+FR L + QL +IVDI L+++ +RL+ +N+ L VT K+ L E GY+P YGARPL+R I
Sbjct: 765 MFRPLTREQLSQIVDIQLRQVRQRLKQRNITLQVTLRAKEWLAERGYDPVYGARPLKRVI 824
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
R L D LA ++L G ++ G++V +D D GN+
Sbjct: 825 QRELLDPLANMLLRGEVRDGETVLVDVDEHGNL 857
>gi|295702321|ref|YP_003595396.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
megaterium DSM 319]
gi|294799980|gb|ADF37046.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
megaterium DSM 319]
Length = 813
Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 156/278 (56%), Positives = 201/278 (72%), Gaps = 9/278 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+RIDMSEYMEKH+ S+
Sbjct: 527 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESIFGDEDAMIRIDMSEYMEKHSTSR 586
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPGYVG+E GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+L+DGR+TD KG+
Sbjct: 587 LVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGR 646
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFLNRI 175
TVD +NTI+IMTSN+G + R LG M+ V E++R FRPEFLNRI
Sbjct: 647 TVDFRNTILIMTSNVGADTLKRSKHLGFTVEAEGQEYKDMKGKVMAEMKRAFRPEFLNRI 706
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
DE+IVF L K L EIV +M ++ +RL+ + ++L +T K+ EEG++P YGARPL
Sbjct: 707 DEIIVFHSLEKPHLAEIVKLMADQLTKRLKEQEIDLELTKEAIDKIAEEGFDPEYGARPL 766
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
RRAI + +ED L+E +L G +Q G VT+D D G V+
Sbjct: 767 RRAIQKHIEDRLSEELLKGVVQKGQKVTLDVDKGEFVV 804
>gi|404330422|ref|ZP_10970870.1| class III stress response-related ATPase [Sporolactobacillus vineae
DSM 21990 = SL153]
Length = 815
Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 158/281 (56%), Positives = 203/281 (72%), Gaps = 9/281 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA A+A FG +EA++RIDMSEYMEKHT
Sbjct: 525 AVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARAVAETLFGDEEAIIRIDMSEYMEKHT 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG E GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 585 TSRLVGSPPGYVGHEEGGQLTEKVRQKPYSVILFDEIEKAHPDVFNILLQVLDDGRLTDS 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+TVD +NT IIMTSN+G S + R +G +M+ V EL+R FRPEFL
Sbjct: 645 KGRTVDFRNTAIIMTSNVGASELKRNKYVGFTVGGENHEYKEMKDKVMGELKRAFRPEFL 704
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE+IVF +L K QLM+IV ++ + RL ++ + + +T K +++EEGY+P YGA
Sbjct: 705 NRIDEIIVFHELTKPQLMQIVTLLAGHLKHRLSSQGIVIDITDKAKAQIVEEGYDPEYGA 764
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
RPLRRA+ R +ED L+E +L G I+ G V +D G V+
Sbjct: 765 RPLRRALQRRVEDKLSEELLKGNIEKGTQVIIDYADGDYVV 805
>gi|384049297|ref|YP_005497314.1| Class III stress response ATPase, ClpC [Bacillus megaterium
WSH-002]
gi|345446988|gb|AEN92005.1| Class III stress response ATPase, ClpC [Bacillus megaterium
WSH-002]
Length = 813
Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 156/278 (56%), Positives = 201/278 (72%), Gaps = 9/278 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+RIDMSEYMEKH+ S+
Sbjct: 527 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESIFGDEDAMIRIDMSEYMEKHSTSR 586
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPGYVG+E GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+L+DGR+TD KG+
Sbjct: 587 LVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGR 646
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFLNRI 175
TVD +NTI+IMTSN+G + R LG M+ V E++R FRPEFLNRI
Sbjct: 647 TVDFRNTILIMTSNVGADTLKRSKHLGFTVEAEGQDYKDMKGKVMAEMKRAFRPEFLNRI 706
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
DE+IVF L K L EIV +M ++ +RL+ + ++L +T K+ EEG++P YGARPL
Sbjct: 707 DEIIVFHSLEKPHLAEIVKLMADQLTKRLKEQEIDLELTKEAIDKIAEEGFDPEYGARPL 766
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
RRAI + +ED L+E +L G +Q G VT+D D G V+
Sbjct: 767 RRAIQKHIEDRLSEELLKGVVQKGQKVTLDVDKGEFVV 804
>gi|269836474|ref|YP_003318702.1| ATP-dependent chaperone ClpB [Sphaerobacter thermophilus DSM 20745]
gi|269785737|gb|ACZ37880.1| ATP-dependent chaperone ClpB [Sphaerobacter thermophilus DSM 20745]
Length = 870
Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 154/273 (56%), Positives = 201/273 (73%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DPNRP+ SF+F GPTGVGKTELA ALA F + AMVRIDMSEY E+HT
Sbjct: 587 AIRRARSGLQDPNRPLGSFIFLGPTGVGKTELARALAEFLFDDERAMVRIDMSEYQERHT 646
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG++ GGQLTEA+R RP++V+LFDEIEKAH +V NV+LQ+LDDGR+TDG
Sbjct: 647 VARLIGAPPGYVGYDEGGQLTEAIRRRPYAVVLFDEIEKAHPEVFNVLLQVLDDGRLTDG 706
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVF 181
+G+TVD +NT+IIMTSN+G + I G +M R V E LR FRPEFLNRIDE+++F
Sbjct: 707 QGRTVDFRNTVIIMTSNLGSAYIQAAGPQGEAEMRRRVFEALRNHFRPEFLNRIDEIVIF 766
Query: 182 RQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGR 241
L + L IVDI L+++ ERL +N+ L VT K+ L + GY+P +GARPL+R I R
Sbjct: 767 HALTREHLAMIVDIQLRQVAERLADRNITLQVTQRAKEWLADRGYDPVFGARPLKRTIQR 826
Query: 242 LLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
L D LA+ +L G I GD+VT+D G + +
Sbjct: 827 ELLDRLAKALLEGKIHEGDTVTVDVGPDGALTI 859
>gi|415886308|ref|ZP_11548131.1| Class III stress response-related ATPase, ClpC [Bacillus
methanolicus MGA3]
gi|387588961|gb|EIJ81282.1| Class III stress response-related ATPase, ClpC [Bacillus
methanolicus MGA3]
Length = 814
Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 155/278 (55%), Positives = 203/278 (73%), Gaps = 9/278 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+RIDMSEYMEKH+ S+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEAMFGDEDAMIRIDMSEYMEKHSTSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPGYVG+E GGQLTE VR +P+SVIL DEIEKAH DV N++LQ+L+DGR+TD KG+
Sbjct: 586 LVGSPPGYVGYEEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSD---------QMERGVAEELRRRFRPEFLNRI 175
TVD +NT++IMTSN+G + R +G + M+ V EEL++ FRPEFLNRI
Sbjct: 646 TVDFRNTVLIMTSNVGAEALKRNKYVGFNIQDGEQDYKDMKGKVMEELKKAFRPEFLNRI 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
DE+IVF L K L EIV +M ++ +RL+ +++ L +T K+K+ EEGY+P YGARPL
Sbjct: 706 DEIIVFHALEKKHLREIVTLMANQLMKRLKEQDIHLELTDAAKEKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
RRAI + +ED L+E +L G + G V +D + G V+
Sbjct: 766 RRAIQKHIEDRLSEELLKGAVLTGQHVVIDVEDGEFVV 803
>gi|425449338|ref|ZP_18829179.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 7941]
gi|389764052|emb|CCI09557.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 7941]
Length = 795
Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 156/289 (53%), Positives = 212/289 (73%), Gaps = 12/289 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARV +++PNRPI+SF+F GPTGVGKTEL ALA FGS+ +M+R+DMSE+ME HT
Sbjct: 490 AIRRARVNLKNPNRPIASFIFAGPTGVGKTELTKALAKLLFGSESSMIRLDMSEFMESHT 549
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK G+PPGY+G+ GGQLTEAVR +P+ V+LFDEIEKAH DV N++LQLL+DGR+TD
Sbjct: 550 VSKLIGAPPGYIGYNEGGQLTEAVRRQPYRVVLFDEIEKAHPDVFNLLLQLLEDGRLTDS 609
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-ESILGSD-----------QMERGVAEELRRRFRP 169
+G+ VD KNT+IIMTSNIG VI + + LG + Q+ V +EL++ FRP
Sbjct: 610 QGRRVDFKNTLIIMTSNIGSKVIEKGGNSLGFEMADDFAQSRYQQISNRVTDELKQYFRP 669
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL + ++ +I DI++ ++ ++L K + + VT FK +I EGY+PS
Sbjct: 670 EFLNRLDEIIVFRQLTREEVTQIADILIADLAKQLTEKGISVEVTAAFKDLVINEGYDPS 729
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHR 278
YGARPLRRA+ R LED+LAE +L+G + GD +D + G V + H+
Sbjct: 730 YGARPLRRALTRRLEDSLAEAMLSGKVNSGDHALLDVTADGVVTVSSHQ 778
>gi|398813140|ref|ZP_10571842.1| ATPase with chaperone activity, ATP-binding subunit [Brevibacillus
sp. BC25]
gi|398039301|gb|EJL32439.1| ATPase with chaperone activity, ATP-binding subunit [Brevibacillus
sp. BC25]
Length = 816
Score = 325 bits (833), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 152/281 (54%), Positives = 209/281 (74%), Gaps = 9/281 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA A+A FG ++AM+R+DMSEYMEKH+
Sbjct: 528 AIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARAVAETLFGDEDAMIRVDMSEYMEKHS 587
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
++ G+PPGYVGF+ GGQLTE VR +P+SVIL DEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 588 TARLVGAPPGYVGFDEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDS 647
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+TVD +NT++IMTSN+G ++I + + LG M+ V +EL++ FRPEFL
Sbjct: 648 KGRTVDFRNTVVIMTSNVGANMIKKNTTLGFTTNDSERKYQDMKDKVMDELKKSFRPEFL 707
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDEVIVF L + + +IV +M E+ +RL+ ++++ +T KK L +EG++P+YGA
Sbjct: 708 NRIDEVIVFHSLEQEHIEQIVSLMTDELRKRLKEQDIDFQLTEEAKKVLAKEGFDPAYGA 767
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
RPLRRAI R +EDNL+E +L G I GD+V ++ + G V+
Sbjct: 768 RPLRRAIQRHIEDNLSEELLKGTISKGDTVNIEAEEGKLVV 808
>gi|425437168|ref|ZP_18817593.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9432]
gi|389677887|emb|CCH93205.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9432]
Length = 795
Score = 325 bits (833), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 156/289 (53%), Positives = 211/289 (73%), Gaps = 12/289 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARV +++PNRPI+SF+F GPTGVGKTEL ALA FGS+ +M+R+DMSE+ME HT
Sbjct: 490 AIRRARVNLKNPNRPIASFIFAGPTGVGKTELTKALAKLLFGSESSMIRLDMSEFMESHT 549
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK G+PPGY+G+ GGQLTEAVR +P+ V+LFDEIEKAH DV N++LQLL+DGR+TD
Sbjct: 550 VSKLIGAPPGYIGYNEGGQLTEAVRRQPYRVVLFDEIEKAHPDVFNLLLQLLEDGRLTDS 609
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-ESILGSD-----------QMERGVAEELRRRFRP 169
+G+ VD KNT+IIMTSNIG VI + + LG + Q+ V +EL++ FRP
Sbjct: 610 QGRRVDFKNTLIIMTSNIGSKVIEKGGNSLGFEMADDFAQSRYQQISNRVTDELKQYFRP 669
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL + ++ +I DI++ ++ ++L K + + VT FK +I EGY+PS
Sbjct: 670 EFLNRLDEIIVFRQLTREEVTQIADILIADLAKQLTEKGISVQVTAAFKDLVINEGYDPS 729
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHR 278
YGARPLRRA+ R LED+LAE +L+G + GD +D + V + HR
Sbjct: 730 YGARPLRRALTRRLEDSLAEAMLSGKVNSGDHALLDVTAEAVVTVSSHR 778
>gi|242620119|ref|YP_003002123.1| ATP-dependent clp protease ATP-binding subunit [Aureococcus
anophagefferens]
gi|239997364|gb|ACS36887.1| ATP-dependent clp protease ATP-binding subunit [Aureococcus
anophagefferens]
Length = 846
Score = 325 bits (833), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 158/282 (56%), Positives = 208/282 (73%), Gaps = 16/282 (5%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+R+PNRPI+SF+F+GPTGVGKTEL ALA +FG++++MVR+DMSEYME+HT
Sbjct: 530 AIRRARVGLRNPNRPIASFMFSGPTGVGKTELTKALALYFFGAEDSMVRLDMSEYMERHT 589
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V+K GSPPGYVG+ GGQLTEAVR +P++V+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 590 VAKLIGSPPGYVGYSEGGQLTEAVRRKPYTVVLFDEIEKAHPDVFNLLLQILEDGRLTDS 649
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SD-------QMERGVAEELRR 165
KG+T+D KNT+II+TSN+G VI + + G SD +M V EEL+R
Sbjct: 650 KGRTIDFKNTMIILTSNVGAKVIEQSTTSGGGLGFDSPDSDNTDSQYSRMAELVNEELKR 709
Query: 166 RFRPEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEG 225
FRPEFLNR+DEVIVF+QL K L +I DIML ++ R + + L +T K LI+EG
Sbjct: 710 FFRPEFLNRLDEVIVFQQLTKQDLSQIADIMLAQLCARTQEQQFTLNITPRAKDLLIDEG 769
Query: 226 YNPSYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
++P YGARPLRRAI +LLED LA +L+ I+ V +D +
Sbjct: 770 FDPVYGARPLRRAIMKLLEDKLANTVLSEVIEPDSLVLVDVN 811
>gi|256752490|ref|ZP_05493347.1| ATPase AAA-2 domain protein [Thermoanaerobacter ethanolicus CCSD1]
gi|256748625|gb|EEU61672.1| ATPase AAA-2 domain protein [Thermoanaerobacter ethanolicus CCSD1]
Length = 816
Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 151/272 (55%), Positives = 206/272 (75%), Gaps = 11/272 (4%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTGVGKTEL ALA FG + AM+R+DMSEYME+HTVSK GS
Sbjct: 532 GLKDPKRPIGSFIFLGPTGVGKTELTKALAEALFGDENAMIRLDMSEYMERHTVSKLIGS 591
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVGFE GGQLTE VR +P+SVIL DEIEKAH DV N++LQ+L+DGR+TD KG+TVD
Sbjct: 592 PPGYVGFEEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQILEDGRLTDSKGRTVDF 651
Query: 129 KNTIIIMTSNIGDSVIARESILG-----------SDQMERGVAEELRRRFRPEFLNRIDE 177
KNT+IIMTSN+G ++ ++S LG D+++ + ELR+ FRPEFLNR+DE
Sbjct: 652 KNTVIIMTSNVGAELLKKQSTLGFMPQEKEDKASYDKIKETLMAELRKTFRPEFLNRVDE 711
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+IVF QL+K + +I DIM+KE+ +RL+ +++L T K+++I++GY+P+YGARPLRR
Sbjct: 712 IIVFHQLSKEDIEKIADIMIKELNDRLKENDIKLDFTPEAKEEIIKQGYDPNYGARPLRR 771
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
I R++E+ L+E++L G ++ GD + + G
Sbjct: 772 VIQRIVENQLSELMLQGEVKPGDELIVTAKDG 803
>gi|167036769|ref|YP_001664347.1| ATPase [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|167039489|ref|YP_001662474.1| ATPase [Thermoanaerobacter sp. X514]
gi|307725185|ref|YP_003904936.1| ATPase [Thermoanaerobacter sp. X513]
gi|320115191|ref|YP_004185350.1| ATPase [Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|166853729|gb|ABY92138.1| ATPase AAA-2 domain protein [Thermoanaerobacter sp. X514]
gi|166855603|gb|ABY94011.1| ATPase AAA-2 domain protein [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|307582246|gb|ADN55645.1| ATPase AAA-2 domain protein [Thermoanaerobacter sp. X513]
gi|319928282|gb|ADV78967.1| ATPase AAA-2 domain protein [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 816
Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 151/272 (55%), Positives = 206/272 (75%), Gaps = 11/272 (4%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTGVGKTEL ALA FG + AM+R+DMSEYME+HTVSK GS
Sbjct: 532 GLKDPKRPIGSFIFLGPTGVGKTELTKALAEALFGDENAMIRLDMSEYMERHTVSKLIGS 591
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVGFE GGQLTE VR +P+SVIL DEIEKAH DV N++LQ+L+DGR+TD KG+TVD
Sbjct: 592 PPGYVGFEEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQILEDGRLTDSKGRTVDF 651
Query: 129 KNTIIIMTSNIGDSVIARESILG-----------SDQMERGVAEELRRRFRPEFLNRIDE 177
KNT+IIMTSN+G ++ ++S LG D+++ + ELR+ FRPEFLNR+DE
Sbjct: 652 KNTVIIMTSNVGAELLKKQSTLGFMPQEKEDKASYDKIKETLMAELRKTFRPEFLNRVDE 711
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+IVF QL+K + +I DIM+KE+ +RL+ +++L T K+++I++GY+P+YGARPLRR
Sbjct: 712 IIVFHQLSKEDIEKIADIMIKELNDRLKENDIKLDFTPEAKEEIIKQGYDPNYGARPLRR 771
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
I R++E+ L+E++L G ++ GD + + G
Sbjct: 772 VIQRIVENQLSELMLQGEVKPGDELIVTAKDG 803
>gi|317123126|ref|YP_004103129.1| ATPase AAA [Thermaerobacter marianensis DSM 12885]
gi|315593106|gb|ADU52402.1| ATPase AAA-2 domain protein [Thermaerobacter marianensis DSM 12885]
Length = 839
Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 156/275 (56%), Positives = 208/275 (75%), Gaps = 10/275 (3%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+ +DMSEYME+HTVS+ GS
Sbjct: 532 GLKDPRRPIGSFIFLGPTGVGKTELAKALAEALFGDEDAMIVLDMSEYMERHTVSRLVGS 591
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG+E GGQLTE VR RP+SV++FDEIEKAH +V NV+LQ+L++GR+T+ KG+TVD
Sbjct: 592 PPGYVGYEEGGQLTEQVRRRPYSVVVFDEIEKAHPEVFNVLLQILEEGRLTEAKGRTVDF 651
Query: 129 KNTIIIMTSNIGDSVIARESILG---SDQ-------MERGVAEELRRRFRPEFLNRIDEV 178
+NT+IIMTSN+G +I R++ +G DQ M+R + +E++R FRPEFLNRIDE+
Sbjct: 652 RNTVIIMTSNVGADLIRRQTRVGFQAGDQEAPDYEDMKRKIMDEVKRTFRPEFLNRIDEL 711
Query: 179 IVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRA 238
IVF L + LM IVD+MLK + +RL+ +EL VT K+KL++EG + YGARPLRR
Sbjct: 712 IVFHALTEEHLMRIVDLMLKRVAQRLKEHGLELEVTEAAKRKLVKEGADVVYGARPLRRT 771
Query: 239 IGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
I RL+ED L+E +L G + GD+V +D D G ++
Sbjct: 772 ITRLVEDPLSEEMLAGRFKEGDTVVVDVDEEGRIV 806
>gi|410666747|ref|YP_006919118.1| chaperone protein ClpB [Thermacetogenium phaeum DSM 12270]
gi|409104494|gb|AFV10619.1| chaperone protein ClpB [Thermacetogenium phaeum DSM 12270]
Length = 820
Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 155/290 (53%), Positives = 209/290 (72%), Gaps = 11/290 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G++DP RPI SF+F GPTGVGKTELA ALA FG +EAMVR DMSEYMEKHT
Sbjct: 528 AMRRSRAGLKDPKRPIGSFIFLGPTGVGKTELARALAEALFGDEEAMVRFDMSEYMEKHT 587
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GQLTEAVR RP+SV+LFDEIEKAH D+ +V+LQ+++DGR+TD
Sbjct: 588 VSRLLGAPPGYVGYEEAGQLTEAVRRRPYSVVLFDEIEKAHPDIFHVLLQVMEDGRLTDA 647
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG-----------SDQMERGVAEELRRRFRPE 170
KG+TVD +NT+IIMTSN+G ++I RE LG + M+ + +ELRR FRPE
Sbjct: 648 KGRTVDFRNTVIIMTSNVGANLIKREHRLGFKAGERQDELDYEAMKERITDELRRTFRPE 707
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNR+DE+IVF LN+ + +IV +MLK I +R+ + L T ++ L+++GY+P++
Sbjct: 708 FLNRVDEIIVFHPLNEEHMKKIVGLMLKNISKRIAEYGLHLEFTKEAEELLVKKGYDPTF 767
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNG 280
GARPLRR I R++ED L+E +L G + GD+V +D V + R+
Sbjct: 768 GARPLRRVIQRMVEDELSEEMLAGKFKAGDAVLVDAGEDKLVFKPKERDA 817
>gi|425462781|ref|ZP_18842248.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9808]
gi|389824116|emb|CCI27215.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9808]
Length = 795
Score = 324 bits (831), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 156/289 (53%), Positives = 212/289 (73%), Gaps = 12/289 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARV +++PNRPI+SF+F GPTGVGKTEL ALA FGS+ +M+R+DMSE+ME HT
Sbjct: 490 AIRRARVNLKNPNRPIASFIFAGPTGVGKTELTKALAKLLFGSESSMIRLDMSEFMESHT 549
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK G+PPGY+G+ GGQLTEAVR +P+ V+LFDEIEKAH DV N++LQLL+DGR+TD
Sbjct: 550 VSKLIGAPPGYIGYNEGGQLTEAVRRQPYRVVLFDEIEKAHPDVFNLLLQLLEDGRLTDS 609
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR--ESI---LGSD-------QMERGVAEELRRRFRP 169
+G+ VD KNT+IIMTSNIG VI + +S+ + D Q+ V EEL++ FRP
Sbjct: 610 QGRRVDFKNTLIIMTSNIGSKVIEKGGKSLGFEMADDFAQSRYQQISNRVTEELKQYFRP 669
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL + ++ +I DI++ ++ ++L K + + VT FK +I EGY+PS
Sbjct: 670 EFLNRLDEIIVFRQLTREEVTQIADILIADLAKQLTEKGISVQVTAAFKDLVINEGYDPS 729
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHR 278
YGARPLRRA+ R LED+LAE +L+G + GD +D + V + H+
Sbjct: 730 YGARPLRRALTRRLEDSLAEAMLSGKVNSGDHALLDVTAEAVVTVSSHQ 778
>gi|212637926|ref|YP_002314446.1| Class III stress response-related ATPase, ClpC [Anoxybacillus
flavithermus WK1]
gi|212559406|gb|ACJ32461.1| Class III stress response-related ATPase, ClpC [Anoxybacillus
flavithermus WK1]
Length = 813
Score = 324 bits (831), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 159/281 (56%), Positives = 205/281 (72%), Gaps = 9/281 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+RIDMSEYMEKH+ S+
Sbjct: 529 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEAMFGDEDAMIRIDMSEYMEKHSTSR 588
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPGYVG+E GGQLTE VR +P+SVIL DEIEKAH DV N++LQ+L+DGR+TD KG+
Sbjct: 589 LVGSPPGYVGYEEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGR 648
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG------SDQ---MERGVAEELRRRFRPEFLNRI 175
TVD +NTIIIMTSN+G + R +G S Q M+ V +EL++ FRPEFLNRI
Sbjct: 649 TVDFRNTIIIMTSNVGADALKRNKYVGFNVQDESQQYKDMKGKVMDELKKAFRPEFLNRI 708
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
DE+IVF L K L EIV +M++++ +RL+ + ++L +T +KL EEGY+ YGARPL
Sbjct: 709 DEIIVFHSLEKKHLKEIVSLMVEQLKKRLQEQQIDLELTDAAIEKLAEEGYDLEYGARPL 768
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYR 276
RRAI + +ED L+E +L G I G V MD G V++ +
Sbjct: 769 RRAIQKHVEDRLSEELLKGTIGSGQKVVMDVKDGQFVVLTK 809
>gi|443662998|ref|ZP_21133044.1| clp amino terminal domain protein [Microcystis aeruginosa
DIANCHI905]
gi|159028807|emb|CAO89978.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443332002|gb|ELS46635.1| clp amino terminal domain protein [Microcystis aeruginosa
DIANCHI905]
Length = 795
Score = 324 bits (831), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 157/289 (54%), Positives = 212/289 (73%), Gaps = 12/289 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARV +++PNRPI+SF+F GPTGVGKTEL ALA FGS+ +M+R+DMSE+ME HT
Sbjct: 490 AIRRARVNLKNPNRPIASFIFAGPTGVGKTELTKALAKLLFGSESSMIRLDMSEFMESHT 549
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK G+PPGY+G+ GGQLTEAVR +P+ V+LFDEIEKAH DV N++LQLL+DGR+TD
Sbjct: 550 VSKLIGAPPGYIGYNEGGQLTEAVRRQPYRVVLFDEIEKAHPDVFNLLLQLLEDGRLTDS 609
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR--ESI---LGSD-------QMERGVAEELRRRFRP 169
+G+ VD KNT+IIMTSNIG VI + +S+ + D Q+ V EEL++ FRP
Sbjct: 610 QGRRVDFKNTLIIMTSNIGSKVIEKGGKSLGFEMADDFAQSRYQQISNRVTEELKQYFRP 669
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL + ++ +I DI++ +I ++L K + + VT FK +I EGY+PS
Sbjct: 670 EFLNRLDEIIVFRQLTREEVTQIADILIADIAKQLTEKGISVEVTAAFKDLVINEGYDPS 729
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHR 278
YGARPLRRA+ R LED+LA +L+G + GD +D + G V + H+
Sbjct: 730 YGARPLRRALTRRLEDSLAVAMLSGKVNSGDHALLDVTADGVVTVSSHQ 778
>gi|433447284|ref|ZP_20410881.1| Class III stress response-related ATPase, ClpC subunit
[Anoxybacillus flavithermus TNO-09.006]
gi|431999948|gb|ELK20855.1| Class III stress response-related ATPase, ClpC subunit
[Anoxybacillus flavithermus TNO-09.006]
Length = 810
Score = 324 bits (831), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 159/281 (56%), Positives = 205/281 (72%), Gaps = 9/281 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+RIDMSEYMEKH+ S+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEAMFGDEDAMIRIDMSEYMEKHSTSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPGYVG+E GGQLTE VR +P+SVIL DEIEKAH DV N++LQ+L+DGR+TD KG+
Sbjct: 586 LVGSPPGYVGYEEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG------SDQ---MERGVAEELRRRFRPEFLNRI 175
TVD +NTIIIMTSN+G + R +G S Q M+ V +EL++ FRPEFLNRI
Sbjct: 646 TVDFRNTIIIMTSNVGADALKRNKYVGFNVQDESQQYKDMKGKVMDELKKAFRPEFLNRI 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
DE+IVF L K L EIV +M++++ +RL+ + ++L +T +KL EEGY+ YGARPL
Sbjct: 706 DEIIVFHSLEKKHLKEIVSLMVEQLKKRLQEQQIDLELTDAAIEKLAEEGYDLEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYR 276
RRAI + +ED L+E +L G I G V MD G V++ +
Sbjct: 766 RRAIQKHVEDRLSEELLKGTIGSGQKVVMDVKDGQFVVLTK 806
>gi|374709167|ref|ZP_09713601.1| class III stress response-related ATPase [Sporolactobacillus
inulinus CASD]
Length = 816
Score = 324 bits (831), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 154/277 (55%), Positives = 204/277 (73%), Gaps = 9/277 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA A+A FG +E+++RIDMSEYMEKHT
Sbjct: 525 AIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARAVAETLFGDEESIIRIDMSEYMEKHT 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG + GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 585 TSRLVGSPPGYVGHDEGGQLTEKVRQKPYSVILFDEIEKAHPDVFNILLQVLDDGRLTDS 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+TVD +NT IIMTSN+G S + + +G +M+ V EL+R FRPEFL
Sbjct: 645 KGRTVDFRNTAIIMTSNVGASQLKKNKYVGFSVDEEGHEYKEMKERVMGELKRAFRPEFL 704
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE+IVF +L K +LMEIV ++ ++ RL + +++ +T K++++EEGY+P YGA
Sbjct: 705 NRIDEIIVFHELKKEELMEIVTLLADQLRNRLSNQGIQIDLTDAAKRQIVEEGYDPEYGA 764
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
RPLRRA+ R +ED L+E +L G I+ G +V +D G
Sbjct: 765 RPLRRALQRKVEDKLSEELLKGNIKKGTNVVIDYQDG 801
>gi|399889691|ref|ZP_10775568.1| negative regulator of genetic competence mecB/clpC [Clostridium
arbusti SL206]
Length = 813
Score = 324 bits (831), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 152/274 (55%), Positives = 209/274 (76%), Gaps = 11/274 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG++DP RPI SF+F GPTGVGKTEL+ ALA FG + +++RIDMSEYMEKHT
Sbjct: 528 AVRRARVGLKDPKRPIGSFIFLGPTGVGKTELSKALAEAMFGDESSIIRIDMSEYMEKHT 587
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ GSPPGYVGF++GGQLTE VR +P+SV+LFDEIEKAH DV N++LQ+L+DGR+TDG
Sbjct: 588 VSRLIGSPPGYVGFDDGGQLTEKVRRKPYSVVLFDEIEKAHPDVFNILLQILEDGRLTDG 647
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG-----------SDQMERGVAEELRRRFRPE 170
KG+TV+ +NTIII+TSN+G S I R+ LG ++M+ + +EL+R FRPE
Sbjct: 648 KGKTVNFQNTIIILTSNVGASTIKRQKSLGFSVSNDETEDEYEKMKDNIMDELKRSFRPE 707
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNRID++IVF QL + L E+V +ML+ + RL +++ + T +K L ++G++P+Y
Sbjct: 708 FLNRIDDIIVFHQLLEEDLQEVVKLMLESVSSRLNDQDINIKFTEEAEKLLAKKGFDPTY 767
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTM 264
GARPLRRAI +++ED +AE IL G + GD+V++
Sbjct: 768 GARPLRRAITKIVEDKIAEEILNGSLHKGDNVSV 801
>gi|28212201|ref|NP_783145.1| negative regulator of genetic competence mecB/clpC [Clostridium
tetani E88]
gi|28204645|gb|AAO37082.1| negative regulator of genetic competence mecB/clpC [Clostridium
tetani E88]
Length = 811
Score = 324 bits (831), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 158/274 (57%), Positives = 206/274 (75%), Gaps = 11/274 (4%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RARVG++DPNRPI SF+F GPTGVGKTEL+ ALA FG + +M+RIDMSEYMEKH VS+
Sbjct: 529 RARVGLKDPNRPIGSFIFLGPTGVGKTELSKALAEAMFGDESSMIRIDMSEYMEKHAVSR 588
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPGYVG++ GGQLTE VR P+SVILFDEIEKAH DV N++LQ+L+DGR+TDGKG+
Sbjct: 589 LIGSPPGYVGYDEGGQLTEKVRRHPYSVILFDEIEKAHPDVFNILLQILEDGRLTDGKGK 648
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG---SD--------QMERGVAEELRRRFRPEFLN 173
TV+ KNTIIIMTSN+G S I ++ LG SD QM+ V EEL+R FRPEFLN
Sbjct: 649 TVNFKNTIIIMTSNVGASTIKKQKSLGFAISDDKIESEYEQMKENVMEELKRSFRPEFLN 708
Query: 174 RIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGAR 233
RID++IVF +L + L +IV +ML+ + RL+ +++ ++ +K L ++G++P YGAR
Sbjct: 709 RIDDIIVFHKLREEDLEKIVALMLESVTHRLKNQDINISFDKKSQKFLAKKGFDPVYGAR 768
Query: 234 PLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
PLRRAI + +ED L+E IL G I+ GD V + +
Sbjct: 769 PLRRAITKAVEDKLSEEILKGSIEKGDKVLVSVN 802
>gi|83589034|ref|YP_429043.1| ATPases with chaperone activity, ATP-binding subunit [Moorella
thermoacetica ATCC 39073]
gi|83571948|gb|ABC18500.1| ATPases with chaperone activity, ATP-binding subunit [Moorella
thermoacetica ATCC 39073]
Length = 840
Score = 324 bits (830), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 158/265 (59%), Positives = 199/265 (75%), Gaps = 11/265 (4%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTGVGKTELA ALA FG ++AMVR DMSEYMEKHTVS+ G+
Sbjct: 561 GLKDPKRPIGSFIFLGPTGVGKTELARALAEALFGDEDAMVRFDMSEYMEKHTVSRLVGA 620
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG+E GQLTEAVR RP+SV+LFDEIEKAH D+ NV+LQ+LDDGR+TD KG+TVD
Sbjct: 621 PPGYVGYEESGQLTEAVRRRPYSVVLFDEIEKAHPDIFNVLLQVLDDGRLTDAKGRTVDF 680
Query: 129 KNTIIIMTSNIGDSVIARESI-----------LGSDQMERGVAEELRRRFRPEFLNRIDE 177
+NT+IIMTSNIG S I RES+ D+M++ + EELRR FRPEFLNRID+
Sbjct: 681 RNTVIIMTSNIGASTIKRESLGFKASTSEVAAESYDKMKKHILEELRRTFRPEFLNRIDD 740
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+IVF L++ + +IVD+ML E+ RLE N+ + VT K L+ EG++ +YGARPLRR
Sbjct: 741 LIVFHALSRDDIRKIVDLMLAELNRRLEDNNLSVEVTDEAKDILVREGFDEAYGARPLRR 800
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSV 262
AI L+ED L++ +L G + GD V
Sbjct: 801 AIQTLIEDQLSDEMLAGKFKPGDKV 825
>gi|215400791|ref|YP_002327552.1| caseinolytic-like Clp protease [Vaucheria litorea]
gi|194441241|gb|ACF70969.1| caseinolytic-like Clp protease [Vaucheria litorea]
Length = 862
Score = 324 bits (830), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 156/288 (54%), Positives = 210/288 (72%), Gaps = 15/288 (5%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+R+PNRPI+SFLF GPTGVGKTEL ALA +FGS+++M+R+DMSEYMEKHT
Sbjct: 554 AIRRARVGLRNPNRPIASFLFAGPTGVGKTELTKALASYFFGSEDSMIRLDMSEYMEKHT 613
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V+K GSPPGY+G+ GGQLTEAVR +P++VILFDE+EK H D+ N++LQ+L+DGR+TD
Sbjct: 614 VAKLIGSPPGYIGYNEGGQLTEAVRRKPYTVILFDEVEKGHPDIFNLLLQILEDGRLTDS 673
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD---------------QMERGVAEELRRR 166
KG+ ++ KNTIIIMTSN+G S I ++S L D + V EEL+
Sbjct: 674 KGRVINFKNTIIIMTSNLGSSAIEQQSRLEEDLGFDAITNIEETRYSMLCNLVNEELKEF 733
Query: 167 FRPEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGY 226
FRPEFLNRIDE+IVF+QL K ++ +I IM+ ++ +R E + +EL V+ K KLIEEGY
Sbjct: 734 FRPEFLNRIDEMIVFQQLTKDEIEDIAKIMINDLVKRSEQQKLELEVSDKVKNKLIEEGY 793
Query: 227 NPSYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
NP+YGARPLRRA+ RL+EDN+A L + + +D + G +++
Sbjct: 794 NPAYGARPLRRAVMRLIEDNIASKFLEESPEDQVRIFVDVNEFGEIVV 841
>gi|425446237|ref|ZP_18826247.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9443]
gi|389733621|emb|CCI02634.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9443]
Length = 795
Score = 324 bits (830), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 156/289 (53%), Positives = 211/289 (73%), Gaps = 12/289 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARV +++PNRPI+SF+F GPTGVGKTEL ALA FGS+ +M+R+DMSE+ME HT
Sbjct: 490 AIRRARVNLKNPNRPIASFIFAGPTGVGKTELTKALAKLLFGSESSMIRLDMSEFMESHT 549
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK G+PPGY+G+ GGQLTEAVR +P+ V+LFDEIEKAH DV N++LQLL+DGR+TD
Sbjct: 550 VSKLIGAPPGYIGYNEGGQLTEAVRRQPYKVVLFDEIEKAHPDVFNLLLQLLEDGRLTDS 609
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-ESILGSD-----------QMERGVAEELRRRFRP 169
+G+ VD KNT+IIMTSNIG VI + + LG + Q+ V +EL++ FRP
Sbjct: 610 QGRRVDFKNTLIIMTSNIGSKVIEKGGNSLGFEMADDFAQSRYQQISNRVTDELKQYFRP 669
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL + ++ +I DI++ ++ ++L K + + VT FK +I EGY+PS
Sbjct: 670 EFLNRLDEIIVFRQLTREEVTQIADILIADLGKQLTEKGISVEVTAAFKDLVINEGYDPS 729
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHR 278
YGARPLRRA+ R LED+LAE +L+G + GD +D + V + HR
Sbjct: 730 YGARPLRRALTRRLEDSLAEAMLSGKVNSGDHALLDVTAEAVVTVSSHR 778
>gi|399055773|ref|ZP_10743423.1| ATPase with chaperone activity, ATP-binding subunit [Brevibacillus
sp. CF112]
gi|433543324|ref|ZP_20499734.1| negative regulator of genetic competence [Brevibacillus agri
BAB-2500]
gi|398046636|gb|EJL39230.1| ATPase with chaperone activity, ATP-binding subunit [Brevibacillus
sp. CF112]
gi|432185453|gb|ELK42944.1| negative regulator of genetic competence [Brevibacillus agri
BAB-2500]
Length = 816
Score = 324 bits (830), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 152/281 (54%), Positives = 208/281 (74%), Gaps = 9/281 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA A+A FG ++AM+R+DMSEYMEKH+
Sbjct: 528 AIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARAVAETLFGDEDAMIRVDMSEYMEKHS 587
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
++ G+PPGYVGF+ GGQLTE VR +P+SVIL DEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 588 TARLVGAPPGYVGFDEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDS 647
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+TVD +NT++IMTSN+G S+I + + LG M+ V +EL++ FRPEFL
Sbjct: 648 KGRTVDFRNTVVIMTSNVGASMIKKNTTLGFTTNDTEKKYQDMKDKVMDELKKSFRPEFL 707
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDEVIVF L + + +IV +M E+ +RL+ ++++ +T KK L +EG++P+YGA
Sbjct: 708 NRIDEVIVFHSLEQEHIEQIVSLMTDELRKRLKEQSIDFQLTEDAKKLLAKEGFDPAYGA 767
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
RPLRRAI R +ED L+E +L G I GD+V ++ + G V+
Sbjct: 768 RPLRRAIQRHIEDKLSEELLKGNISKGDTVNIEAEEGKLVV 808
>gi|403252613|ref|ZP_10918922.1| ATPase [Thermotoga sp. EMP]
gi|418044958|ref|ZP_12683054.1| ATPase AAA-2 domain protein [Thermotoga maritima MSB8]
gi|351678040|gb|EHA61187.1| ATPase AAA-2 domain protein [Thermotoga maritima MSB8]
gi|402812103|gb|EJX26583.1| ATPase [Thermotoga sp. EMP]
Length = 792
Score = 324 bits (830), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 155/268 (57%), Positives = 201/268 (75%), Gaps = 2/268 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ +AR GI+DPNRP+ +FLF GPTGVGKTELA LA FGS+ A++RIDM+EYMEKH
Sbjct: 509 AIRKARAGIKDPNRPVGTFLFLGPTGVGKTELAKTLAEVLFGSENALIRIDMTEYMEKHA 568
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK G+PPGYVG+E GGQLTEAVR RP+SVIL DEIEKAH DV N++LQ++DDGR+TD
Sbjct: 569 VSKLIGAPPGYVGYEEGGQLTEAVRRRPYSVILLDEIEKAHPDVFNILLQIMDDGRLTDS 628
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS--DQMERGVAEELRRRFRPEFLNRIDEVI 179
KG VD KNTIIIMTSNI +I G D++E V EEL+ FRPEF+NRID V+
Sbjct: 629 KGNVVDFKNTIIIMTSNIASDLILNYVKEGKSFDEIEERVREELKHYFRPEFINRIDHVV 688
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF+ L K + +IV+IM++ + RL+ KN++LT+T K+ L E+GY+P++GARPLRR I
Sbjct: 689 VFKPLTKEHMKQIVEIMIRRLEARLKDKNIKLTITEAAKEYLAEKGYDPTFGARPLRRLI 748
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCD 267
R +E LA +I+ G +Q G +V +D +
Sbjct: 749 EREIETPLARMIIAGEVQEGQTVRVDYN 776
>gi|170287861|ref|YP_001738099.1| ATPase [Thermotoga sp. RQ2]
gi|170175364|gb|ACB08416.1| ATPase AAA-2 domain protein [Thermotoga sp. RQ2]
Length = 792
Score = 323 bits (829), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 155/268 (57%), Positives = 201/268 (75%), Gaps = 2/268 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ +AR GI+DPNRP+ +FLF GPTGVGKTELA LA FGS+ A++RIDM+EYMEKH
Sbjct: 509 AIRKARAGIKDPNRPVGTFLFLGPTGVGKTELAKTLAEVLFGSENALIRIDMTEYMEKHA 568
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK G+PPGYVG+E GGQLTEAVR RP+SVIL DEIEKAH DV N++LQ++DDGR+TD
Sbjct: 569 VSKLIGAPPGYVGYEEGGQLTEAVRRRPYSVILLDEIEKAHPDVFNILLQIMDDGRLTDS 628
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS--DQMERGVAEELRRRFRPEFLNRIDEVI 179
KG VD KNTIIIMTSNI +I G D++E V EEL+ FRPEF+NRID V+
Sbjct: 629 KGNVVDFKNTIIIMTSNIASDLILNYVKEGKSFDEIEERVREELKHYFRPEFINRIDHVV 688
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF+ L K + +IV+IM++ + RL+ KN++LT+T K+ L E+GY+P++GARPLRR I
Sbjct: 689 VFKPLTKEHMKQIVEIMIRRLETRLKDKNIKLTITEAAKEYLAEKGYDPTFGARPLRRLI 748
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCD 267
R +E LA +I+ G +Q G +V +D +
Sbjct: 749 EREIETPLARMIIAGEVQEGQTVRVDYN 776
>gi|297545353|ref|YP_003677655.1| ATPase [Thermoanaerobacter mathranii subsp. mathranii str. A3]
gi|296843128|gb|ADH61644.1| ATPase AAA-2 domain protein [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 816
Score = 323 bits (829), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 150/272 (55%), Positives = 205/272 (75%), Gaps = 11/272 (4%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTGVGKTEL ALA FG + AM+R+DMSEYME+HTVSK GS
Sbjct: 532 GLKDPKRPIGSFIFLGPTGVGKTELTKALAEALFGDENAMIRLDMSEYMERHTVSKLIGS 591
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVGFE GGQLTE VR +P+SVIL DEIEKAH DV N++LQ+L+DGR+TD KG+TVD
Sbjct: 592 PPGYVGFEEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQILEDGRLTDSKGRTVDF 651
Query: 129 KNTIIIMTSNIGDSVIARESILG-----------SDQMERGVAEELRRRFRPEFLNRIDE 177
KNT+IIMTSN+G ++ +++ LG ++++ + ELR+ FRPEFLNR+DE
Sbjct: 652 KNTVIIMTSNVGAELLKKQATLGFMPQEKEDKASHEKVKETLMAELRKTFRPEFLNRVDE 711
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+IVF QL K + +I DIM+KE+ +RL+ N++L T K+++I++GY+P+YGARPLRR
Sbjct: 712 IIVFHQLTKEDIEKIADIMMKELNDRLKENNIKLEFTPEGKEEIIKQGYDPNYGARPLRR 771
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
I R++E+ L+E++L G ++ GD + + G
Sbjct: 772 VIQRIVENQLSELMLQGKVKPGDELIVTAKDG 803
>gi|289579183|ref|YP_003477810.1| ATPase AAA [Thermoanaerobacter italicus Ab9]
gi|289528896|gb|ADD03248.1| ATPase AAA-2 domain protein [Thermoanaerobacter italicus Ab9]
Length = 816
Score = 323 bits (829), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 150/272 (55%), Positives = 205/272 (75%), Gaps = 11/272 (4%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTGVGKTEL ALA FG + AM+R+DMSEYME+HTVSK GS
Sbjct: 532 GLKDPKRPIGSFIFLGPTGVGKTELTKALAEALFGDENAMIRLDMSEYMERHTVSKLIGS 591
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVGFE GGQLTE VR +P+SVIL DEIEKAH DV N++LQ+L+DGR+TD KG+TVD
Sbjct: 592 PPGYVGFEEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQILEDGRLTDSKGRTVDF 651
Query: 129 KNTIIIMTSNIGDSVIARESILG-----------SDQMERGVAEELRRRFRPEFLNRIDE 177
KNT+IIMTSN+G ++ +++ LG ++++ + ELR+ FRPEFLNR+DE
Sbjct: 652 KNTVIIMTSNVGAELLKKQATLGFMPQEKEDKASHEKVKETLMAELRKTFRPEFLNRVDE 711
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+IVF QL K + +I DIM+KE+ +RL+ N++L T K+++I++GY+P+YGARPLRR
Sbjct: 712 IIVFHQLTKEDIEKIADIMMKELNDRLKENNIKLEFTPEGKEEIIKQGYDPNYGARPLRR 771
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
I R++E+ L+E++L G ++ GD + + G
Sbjct: 772 VIQRIVENQLSELMLQGKVKPGDELIVTAKDG 803
>gi|410582488|ref|ZP_11319594.1| ATPase with chaperone activity, ATP-binding subunit
[Thermaerobacter subterraneus DSM 13965]
gi|410505308|gb|EKP94817.1| ATPase with chaperone activity, ATP-binding subunit
[Thermaerobacter subterraneus DSM 13965]
Length = 834
Score = 323 bits (828), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 154/275 (56%), Positives = 207/275 (75%), Gaps = 10/275 (3%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+ +DMSEYME+HTVS+ GS
Sbjct: 532 GLKDPRRPIGSFIFLGPTGVGKTELAKALAEALFGDEDAMIVLDMSEYMERHTVSRLVGS 591
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG+E GGQLTE VR RP+SV++FDEIEKAH +V NV+LQ+L++GR+T+ KG+TVD
Sbjct: 592 PPGYVGYEEGGQLTEQVRRRPYSVVVFDEIEKAHPEVFNVLLQILEEGRLTEAKGRTVDF 651
Query: 129 KNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEFLNRIDEV 178
+NT+IIMTSN+G +I R+ +G + M+R + +E++R FRPEFLNRIDE+
Sbjct: 652 RNTVIIMTSNVGADLIRRQGRVGFQAAEQEAPDYEDMKRKIMDEVKRTFRPEFLNRIDEL 711
Query: 179 IVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRA 238
IVF L + LM+IVD+MLK + ERL+ + L VT K+KL++EG + YGARPLRR
Sbjct: 712 IVFHALTEEHLMKIVDLMLKRVAERLKEHGLALEVTEAAKRKLVKEGSDVVYGARPLRRT 771
Query: 239 IGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
I RL+ED L+E +L G + GD+V +D D+ G ++
Sbjct: 772 ITRLVEDPLSEEMLAGRFKEGDTVLVDVDAEGKIV 806
>gi|296131785|ref|YP_003639032.1| ATPase AAA [Thermincola potens JR]
gi|296030363|gb|ADG81131.1| ATPase AAA-2 domain protein [Thermincola potens JR]
Length = 810
Score = 323 bits (828), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 156/281 (55%), Positives = 205/281 (72%), Gaps = 9/281 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AMVRIDMSEYMEKH
Sbjct: 524 AVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEALFGDEDAMVRIDMSEYMEKHA 583
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTEAVR +P+SV+L DEIEKAH +V N++LQ+L+DGR+TD
Sbjct: 584 VSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDA 643
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+TVD +NT+IIMTSN+G +I +E+ LG D M V EL+R FRPEFL
Sbjct: 644 KGRTVDFRNTVIIMTSNVGAHLIKKEATLGFKTTAQDTNYDNMRERVTGELKRTFRPEFL 703
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE+IVF L K + +IV++MLKE+ ER++ ++E+ VT K+ L +EG++ +GA
Sbjct: 704 NRIDEIIVFHSLKKEHIKKIVELMLKEVAERMKENDIEIEVTDEAKELLAKEGFDEMFGA 763
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
RPLRRAI + +ED L+E L G + GD V + G V+
Sbjct: 764 RPLRRAIQKTVEDQLSEEFLKGTFKPGDKVVVTAKDGQIVV 804
>gi|373859602|ref|ZP_09602328.1| ATPase AAA-2 domain protein [Bacillus sp. 1NLA3E]
gi|372450597|gb|EHP24082.1| ATPase AAA-2 domain protein [Bacillus sp. 1NLA3E]
Length = 813
Score = 323 bits (828), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 153/278 (55%), Positives = 207/278 (74%), Gaps = 9/278 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+RIDMSEYMEKH+ S+
Sbjct: 525 RARAGLKDPKRPIGSFVFLGPTGVGKTELARALAEAMFGDEDAMIRIDMSEYMEKHSTSR 584
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPGYVG+E GGQLTE VR +P+SVIL DEIEKAH DV N++LQ+L+DGR+TD KG+
Sbjct: 585 LVGSPPGYVGYEEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGR 644
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSD---------QMERGVAEELRRRFRPEFLNRI 175
TVD +NT++IMTSN+G + R +G + M+ V EEL++ FRPEFLNRI
Sbjct: 645 TVDFRNTVLIMTSNVGAEALKRNKYVGFNIQDGAQDYKDMKGKVMEELKKAFRPEFLNRI 704
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
DE+IVF L + QL +IV ++ +++ +RL+ ++++L +T K K+ +EGY+P YGARPL
Sbjct: 705 DEIIVFHALERAQLKQIVTLLSEQLIKRLKDQHIQLELTDAAKDKISDEGYDPEYGARPL 764
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
RRAI + +ED L+E +L G + G ++ +D D+G VI
Sbjct: 765 RRAIQKHIEDRLSEELLKGTVLTGHNIMIDVDNGEFVI 802
>gi|440785432|ref|ZP_20962189.1| ATPase with chaperone activity clpC, two ATP-binding domain protein
[Clostridium pasteurianum DSM 525]
gi|440218328|gb|ELP57550.1| ATPase with chaperone activity clpC, two ATP-binding domain protein
[Clostridium pasteurianum DSM 525]
Length = 812
Score = 323 bits (828), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 152/277 (54%), Positives = 209/277 (75%), Gaps = 11/277 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG++DP RPI SF+F GPTGVGKTEL+ ALA FG + +++RIDMSEYMEKHT
Sbjct: 527 AVRRARVGLKDPKRPIGSFIFLGPTGVGKTELSKALAEAMFGDENSIIRIDMSEYMEKHT 586
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ GSPPGYVGF++GGQLTE VR +P+SV+LFDEIEKAH DV N++LQ+L+DGR+TDG
Sbjct: 587 VSRLIGSPPGYVGFDDGGQLTEKVRRKPYSVVLFDEIEKAHPDVFNILLQILEDGRLTDG 646
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG-----------SDQMERGVAEELRRRFRPE 170
KG+TV+ +NTIII+TSN+G S I ++ LG ++M+ V EEL+R FRPE
Sbjct: 647 KGKTVNFRNTIIILTSNVGASTIKKQKSLGFAVNNNEVEDEYEKMKENVMEELKRSFRPE 706
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNRID++IVF QL + L E+V +ML+ + RL +++ + T +K L ++G++P+Y
Sbjct: 707 FLNRIDDIIVFHQLLEEDLQEVVKLMLQSVSVRLSDQDINIKFTEEAEKLLAKKGFDPTY 766
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
GARPLRR I +++ED ++E IL G + GDSV++ +
Sbjct: 767 GARPLRRTITKIVEDKISEEILNGSLSKGDSVSVTVN 803
>gi|425438773|ref|ZP_18819115.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9717]
gi|389717946|emb|CCH98017.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9717]
Length = 795
Score = 323 bits (827), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 156/289 (53%), Positives = 210/289 (72%), Gaps = 12/289 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARV +++PNRPI+SF+F GPTGVGKTEL ALA FGS+ +M+R+DMSE+ME HT
Sbjct: 490 AIRRARVNLKNPNRPIASFIFAGPTGVGKTELTKALAKLLFGSESSMIRLDMSEFMESHT 549
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK G+PPGY+G+ GGQLTEAVR +P+ V+LFDEIEKAH DV N++LQLL+DG +TD
Sbjct: 550 VSKLIGAPPGYIGYNEGGQLTEAVRRQPYKVVLFDEIEKAHPDVFNLLLQLLEDGHLTDS 609
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-ESILGSD-----------QMERGVAEELRRRFRP 169
+G+ VD KNT+IIMTSNIG VI + + LG + Q+ V EEL++ FRP
Sbjct: 610 QGRRVDFKNTLIIMTSNIGSKVIEKGGNSLGFEMADDFAQSRYQQISNRVTEELKQYFRP 669
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL + ++ +I DI++ ++ ++L K + + VT FK +I EGY+PS
Sbjct: 670 EFLNRLDEIIVFRQLTREEVTQIADILIADLAKQLTEKGISVEVTAAFKDLVINEGYDPS 729
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHR 278
YGARPLRRA+ R LED+LAE +L+G + GD +D + V + HR
Sbjct: 730 YGARPLRRALTRRLEDSLAEAMLSGKVNSGDHALLDVTAETVVTVSSHR 778
>gi|150392194|ref|YP_001322243.1| ATPase [Alkaliphilus metalliredigens QYMF]
gi|149952056|gb|ABR50584.1| ATPase AAA-2 domain protein [Alkaliphilus metalliredigens QYMF]
Length = 812
Score = 323 bits (827), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 152/276 (55%), Positives = 207/276 (75%), Gaps = 12/276 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG++DP RPI SF+F GPTGVGKTEL+ ALA FG ++AM+RIDMSEYMEKHT
Sbjct: 526 AIRRARVGLKDPKRPIGSFIFLGPTGVGKTELSRALAEVMFGDEDAMIRIDMSEYMEKHT 585
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ GSPPGYVGF GGQLTE VR +P+SV+LFDEIEKAH DV NV+LQ+LDDGR+TD
Sbjct: 586 VSRLIGSPPGYVGFNEGGQLTEKVRRKPYSVVLFDEIEKAHPDVFNVLLQILDDGRLTDA 645
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG------------SDQMERGVAEELRRRFRP 169
+G+ ++ KNT+IIMTSN+G I ++ ILG ++M+ V +ELR+ FRP
Sbjct: 646 QGRMINFKNTVIIMTSNVGAHTIKKQRILGFSATVEDQAKNEYEKMKENVMDELRKTFRP 705
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNRID+ IVF L + + +IVD+M+ ++ +RL+A N+ + VT K ++++G++P
Sbjct: 706 EFLNRIDDSIVFHGLEREHIHQIVDLMIGDLKKRLKALNINIEVTEATKNHIVDQGFDPQ 765
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMD 265
YGARPL+RAI +++ED L+E +L G I+ G +V +D
Sbjct: 766 YGARPLKRAIQKIVEDPLSEELLQGTIRNGQTVNVD 801
>gi|307154014|ref|YP_003889398.1| ATP-dependent chaperone ClpB [Cyanothece sp. PCC 7822]
gi|306984242|gb|ADN16123.1| ATP-dependent chaperone ClpB [Cyanothece sp. PCC 7822]
Length = 872
Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 157/269 (58%), Positives = 196/269 (72%), Gaps = 6/269 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRP +SF+F GPTGVGKTELA ALA F S+EA+VRIDMSEYMEKH
Sbjct: 589 AIQRSRAGLADPNRPTASFIFLGPTGVGKTELAKALALNLFDSEEALVRIDMSEYMEKHA 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEA+R RP+SVILFDEIEKAH DV NVMLQ+LDDGR+TD
Sbjct: 649 VSRLLGAPPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHNDVFNVMLQILDDGRLTDS 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS----DQMERGVAEELRRRFRPEFLNRIDE 177
+G+TVD KNTIIIMTSNIG VI I G D+M V E +R FRPEFLNR+DE
Sbjct: 709 QGRTVDFKNTIIIMTSNIGSQVIL--DIAGDDSRYDEMRSRVMEAMRNSFRPEFLNRVDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+F L K QL EIV + +K + +RL + + L ++ L + GY+P YGARPL+R
Sbjct: 767 IIIFHSLQKSQLREIVKLQVKRLEDRLSEQKLSLKLSEQALDYLADIGYDPVYGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
A+ R LE +A+ IL G + GD + +D
Sbjct: 827 AVQRYLETAIAKAILRGDFKQGDMIFVDV 855
>gi|205372096|ref|ZP_03224913.1| class III stress response-related ATPase [Bacillus coahuilensis
m4-4]
Length = 816
Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 155/274 (56%), Positives = 203/274 (74%), Gaps = 9/274 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+RIDMSEYMEKH+ S+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEAMFGDEDAMIRIDMSEYMEKHSTSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPGYVG++ GGQLTE VR +P+SVIL DEIEKAH DV N++LQ+L+DGR+TD KG+
Sbjct: 586 LVGSPPGYVGYDEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG---SDQ------MERGVAEELRRRFRPEFLNRI 175
TVD +NT++IMTSN+G S + R +G SD M+ V EEL+R FRPEFLNRI
Sbjct: 646 TVDFRNTVLIMTSNVGASTLQRNKNVGFNVSDSGEDYKDMKGKVMEELKRAFRPEFLNRI 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
DE IVF L K L EIV +M ++ +RL +++ L++T K K+ +EG++P YGARPL
Sbjct: 706 DETIVFHSLEKAHLQEIVTLMSDQLTKRLIEQDIHLSLTDKAKDKIADEGFDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
RRAI + +ED L+E +L G I G ++++D + G
Sbjct: 766 RRAIQKHIEDRLSEELLKGTIITGQNISIDVEEG 799
>gi|425469734|ref|ZP_18848646.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9701]
gi|389880387|emb|CCI38853.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9701]
Length = 795
Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 155/289 (53%), Positives = 210/289 (72%), Gaps = 12/289 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARV +++PNRPI+SF+F GPTGVGKTEL ALA FGS+ +M+R+DMSE+ME HT
Sbjct: 490 AIRRARVNLKNPNRPIASFIFAGPTGVGKTELTKALAKLLFGSESSMIRLDMSEFMESHT 549
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK G+PPGY+G+ GGQLTEAVR +P+ V+LFDEIEKAH DV N++LQLL+DG +TD
Sbjct: 550 VSKLIGAPPGYIGYNEGGQLTEAVRRQPYRVVLFDEIEKAHPDVFNLLLQLLEDGHLTDS 609
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-ESILGSD-----------QMERGVAEELRRRFRP 169
+G+ VD KNT+IIMTSNIG VI + + LG + Q+ V EEL++ FRP
Sbjct: 610 QGRRVDFKNTLIIMTSNIGSKVIEKGGNSLGFEIADDFAQSRYQQISNRVTEELKQYFRP 669
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL + ++ +I DI++ ++ ++L K + + VT FK +I EGY+PS
Sbjct: 670 EFLNRLDEIIVFRQLTREEVTQIADILIADLAKQLTEKGISVEVTAAFKDLVINEGYDPS 729
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHR 278
YGARPLRRA+ R LED+LAE +L+G + GD +D + V + H+
Sbjct: 730 YGARPLRRALTRRLEDSLAEAMLSGKVNSGDHALLDVTAEAVVTVSSHQ 778
>gi|15896437|ref|NP_349786.1| ABC transporter ATPase [Clostridium acetobutylicum ATCC 824]
gi|337738395|ref|YP_004637842.1| ABC transporter ATPase [Clostridium acetobutylicum DSM 1731]
gi|384459905|ref|YP_005672325.1| ATPase with chaperone activity clpC, two ATP-binding domain protein
[Clostridium acetobutylicum EA 2018]
gi|15026259|gb|AAK81126.1|AE007814_4 ATPases with chaperone activity clpC, two ATP-binding domain
[Clostridium acetobutylicum ATCC 824]
gi|325510594|gb|ADZ22230.1| ATPase with chaperone activity clpC, two ATP-binding domain protein
[Clostridium acetobutylicum EA 2018]
gi|336293592|gb|AEI34726.1| ABC transporter ATPase [Clostridium acetobutylicum DSM 1731]
Length = 813
Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 152/283 (53%), Positives = 206/283 (72%), Gaps = 11/283 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RARVG++DP RPI SF+F GPTGVGKTEL+ ALA FG + ++RIDMSEYMEKHTVS+
Sbjct: 530 RARVGLKDPKRPIGSFIFLGPTGVGKTELSKALAEAMFGDENNIIRIDMSEYMEKHTVSR 589
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPGYVG++ GGQLTE VR +P+SV+LFDEIEKAH DV N++LQ+LDDGR+TD KG+
Sbjct: 590 LVGSPPGYVGYDEGGQLTEKVRRKPYSVVLFDEIEKAHPDVFNILLQILDDGRLTDSKGK 649
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG-----------SDQMERGVAEELRRRFRPEFLN 173
TV NTIIIMTSN+G S I ++ LG D+M+ + EEL+ FRPEFLN
Sbjct: 650 TVSFTNTIIIMTSNVGASTIRKQKTLGFETAKDAVRQEYDKMKENIMEELKNSFRPEFLN 709
Query: 174 RIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGAR 233
RIDE++VF +L + L +IV +ML+ + RL+ +N+++ T ++ L E+G++P+YGAR
Sbjct: 710 RIDEIVVFHKLEEKDLRQIVKLMLESVKGRLKEQNIKINFTEKAEEVLAEKGFDPTYGAR 769
Query: 234 PLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYR 276
PLRR I + +ED L+E IL G I D++++D D ++ +
Sbjct: 770 PLRRTIIKAVEDKLSEEILKGTISKNDNISVDVDKDKELLFTK 812
>gi|422302574|ref|ZP_16389935.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9806]
gi|389788171|emb|CCI16339.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9806]
Length = 795
Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 155/289 (53%), Positives = 210/289 (72%), Gaps = 12/289 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARV +++PNRPI+SF+F GPTGVGKTEL ALA FGS+ +M+R+DMSE+ME HT
Sbjct: 490 AIRRARVNLKNPNRPIASFIFAGPTGVGKTELTKALAKLLFGSESSMIRLDMSEFMESHT 549
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK G+PPGY+G+ GGQLTEAVR +P+ V+LFDEIEKAH DV N++LQLL+DG +TD
Sbjct: 550 VSKLIGAPPGYIGYNEGGQLTEAVRRQPYRVVLFDEIEKAHPDVFNLLLQLLEDGHLTDS 609
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-ESILGSD-----------QMERGVAEELRRRFRP 169
+G+ VD KNT+IIMTSNIG VI + + LG + Q+ V EEL++ FRP
Sbjct: 610 QGRRVDFKNTLIIMTSNIGSKVIEKGGNSLGFEMADDFAQSRYQQISNRVTEELKQYFRP 669
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL + ++ +I DI++ ++ ++L K + + VT FK +I EGY+PS
Sbjct: 670 EFLNRLDEIIVFRQLTREEVTQIADILIADLAKQLTEKGISVEVTAAFKDLVINEGYDPS 729
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHR 278
YGARPLRRA+ R LED+LAE +L+G + GD +D + V + H+
Sbjct: 730 YGARPLRRALTRRLEDSLAEAMLSGKVNSGDHALLDVTAEAVVTVSSHQ 778
>gi|260584980|ref|ZP_05852723.1| negative regulator of genetic competence ClpC/MecB [Granulicatella
elegans ATCC 700633]
gi|260157286|gb|EEW92359.1| negative regulator of genetic competence ClpC/MecB [Granulicatella
elegans ATCC 700633]
Length = 827
Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 155/277 (55%), Positives = 198/277 (71%), Gaps = 9/277 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++ RAR G++DP RPI SFLF GPTGVGKTELA LA FG ++A+VRIDMSEYMEKH+
Sbjct: 531 SIRRARSGLKDPRRPIGSFLFLGPTGVGKTELAKTLAEAMFGEQDALVRIDMSEYMEKHS 590
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ GSPPGYVGF+ GGQLTE +R RP++VIL DEIEKAH DV N++LQ+LDDG +TD
Sbjct: 591 VSRLVGSPPGYVGFDEGGQLTEKIRQRPYAVILLDEIEKAHPDVFNILLQVLDDGHLTDS 650
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+ VD +NT+IIMTSN+G + E +G D ME+ + EEL+ FRPE L
Sbjct: 651 KGRKVDFRNTVIIMTSNLGAVALREEKSVGFGAKTVQQNHDAMEKRIREELKNSFRPELL 710
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE IVF +L K +L +IV IM KEI RL+ N+ + +T L EEG++P YGA
Sbjct: 711 NRIDETIVFHKLQKEELRQIVGIMAKEITSRLQELNITVKITSAVLDVLAEEGFDPEYGA 770
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
RP+RRAI + +ED L+E +L+G I+ G VT+ G
Sbjct: 771 RPIRRAIQKKIEDPLSEALLSGEIRFGQQVTIGATKG 807
>gi|331002049|ref|ZP_08325569.1| hypothetical protein HMPREF0491_00431 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330411845|gb|EGG91250.1| hypothetical protein HMPREF0491_00431 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 829
Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 158/276 (57%), Positives = 201/276 (72%), Gaps = 11/276 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R RVG++DP RPI SFLF GPTGVGKTEL+ ALA+ FGS+ A++R+DMSEYMEKH+
Sbjct: 528 AIRRGRVGLKDPKRPIGSFLFLGPTGVGKTELSKALAYSMFGSENALIRVDMSEYMEKHS 587
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG++ GGQL+E VR P+SVILFDEIEKAH DV N++LQ+LDDG +TD
Sbjct: 588 VSKMVGSPPGYVGYDEGGQLSEKVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDS 647
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----SDQ------MERGVAEELRRRFRPEF 171
G+TVD KNT+II+TSN G I LG SD M+ V +E+++ F+PEF
Sbjct: 648 SGRTVDFKNTVIILTSNAGAQRIVEPKQLGFASNSDNEKDYSVMKTNVMDEVKQMFKPEF 707
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYER-LEAKNMELTVTHTFKKKLIEEGYNPSY 230
LNRIDE IVF QL + L EI+DI+LKEI R LE M L +T K+ LI++GY+ Y
Sbjct: 708 LNRIDETIVFHQLTRENLKEILDILLKEINNRLLEQMQMSLKLTEKAKEFLIDKGYDKKY 767
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
GARPL+RA+ +ED +AE IL G ++ GDS+ +DC
Sbjct: 768 GARPLKRALQNEIEDKMAEEILAGNVKQGDSLKVDC 803
>gi|428776416|ref|YP_007168203.1| ATPase [Halothece sp. PCC 7418]
gi|428690695|gb|AFZ43989.1| ATPase AAA-2 domain protein [Halothece sp. PCC 7418]
Length = 798
Score = 322 bits (824), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 160/283 (56%), Positives = 207/283 (73%), Gaps = 12/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG++D +RPI+SF+F+GPTGVGKTEL ALA FG +EAM+R+DMSEYM+ +
Sbjct: 501 AIRRARVGMKDVDRPIASFIFSGPTGVGKTELTKALAQYMFGDEEAMIRLDMSEYMDPQS 560
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPG+VG++ GG LTE VR RP++V+L DEIEKAH DV N +LQ+LDDG +TD
Sbjct: 561 VSKLIGSPPGFVGYDEGGHLTEQVRRRPYTVVLLDEIEKAHPDVFNSLLQILDDGHLTDS 620
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-----------ESILGSDQMERGVAEELRRRFRPE 170
KG+ VD KNT+IIMTSNIG VI + E ++ V EE++ FRPE
Sbjct: 621 KGRKVDFKNTLIIMTSNIGSQVIEKGGGGLGFELDSEGDSTYTRIRNRVQEEMKNYFRPE 680
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERL-EAKNMELTVTHTFKKKLIEEGYNPS 229
FLNR+DEVIVFRQL K ++ EI D++LKEI RL + + +EL V+ FK ++IEEGY+ S
Sbjct: 681 FLNRVDEVIVFRQLQKEEVGEIADLLLKEIGGRLKDQQGVELEVSDRFKDRVIEEGYDVS 740
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
YGARPLRR + RLLEDNLA+ IL+G + GD+ +D D GN+
Sbjct: 741 YGARPLRRVLMRLLEDNLAQAILSGDLSEGDTAYVDVDDDGNI 783
>gi|298674540|ref|YP_003726290.1| ATP-dependent chaperone ClpB [Methanohalobium evestigatum Z-7303]
gi|298287528|gb|ADI73494.1| ATP-dependent chaperone ClpB [Methanohalobium evestigatum Z-7303]
Length = 880
Score = 322 bits (824), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 157/271 (57%), Positives = 203/271 (74%), Gaps = 2/271 (0%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RA GI+DP++PI SF+F GPTGVGKTELA ALA + F ++ MVR+DMSEYMEKHTVS+
Sbjct: 590 RAHAGIKDPDKPIGSFIFLGPTGVGKTELAKALAADLFDNENNMVRLDMSEYMEKHTVSR 649
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E GGQLTEA+R RP+SVILFDEIEKAH DV N+MLQ+LDDGR+TD +G+
Sbjct: 650 MIGAPPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHHDVFNIMLQILDDGRLTDAQGR 709
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSD--QMERGVAEELRRRFRPEFLNRIDEVIVFR 182
TVD KNTIIIMTSNI + + G+D +M+ EL + FRPEFLNRIDEV +FR
Sbjct: 710 TVDFKNTIIIMTSNIFVDYVHEQLENGADYSKMKSMAQNELSKHFRPEFLNRIDEVAIFR 769
Query: 183 QLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGRL 242
L K QL+EIVDI ++++ ERL + ++L +T K+ L EEGY+ +YGARPL+R I
Sbjct: 770 PLTKEQLVEIVDIKVQDLAERLIHQRLKLEITDKAKQYLAEEGYSETYGARPLQRVIQNE 829
Query: 243 LEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
+E +A+ I++GY+ +V +D D G VI
Sbjct: 830 VETEVAKSIISGYVPERSTVKVDSDENGIVI 860
>gi|238897711|ref|YP_002923390.1| ATP-dependent protease, Hsp 100 [Candidatus Hamiltonella defensa
5AT (Acyrthosiphon pisum)]
gi|229465468|gb|ACQ67242.1| ATP-dependent protease, Hsp 100 [Candidatus Hamiltonella defensa
5AT (Acyrthosiphon pisum)]
Length = 857
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 155/269 (57%), Positives = 199/269 (73%), Gaps = 1/269 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
L R+R G+ DPNRPI SFLF GPTGVGKTEL ALA+ F SK+AMVRIDMSE+MEKHT
Sbjct: 583 ALRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALAYFLFSSKDAMVRIDMSEFMEKHT 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR RP+SV+L DE+EKAH+DV N++LQ+LDDGR+TDG
Sbjct: 643 VSRLLGAPPGYVGYEQGGYLTEAVRRRPYSVVLLDEVEKAHQDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA-RESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT+IIMTSN+G +I R S M++ V E +RR FRPEF+NRIDEV+V
Sbjct: 703 QGRTVDFRNTVIIMTSNLGSDLIQERFSQADYSDMKKSVMEVVRRYFRPEFINRIDEVVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L L I I LK++Y+RLE K +T + L +EGY+P YGARPL+RAI
Sbjct: 763 FHPLEAQHLESIAQIQLKQLYQRLEEKGYTAGITPSALGFLTKEGYDPVYGARPLKRAIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
+ +E+ LA+ IL+G + G + +D + G
Sbjct: 823 QEIENPLAQQILSGQLIPGMPIVLDLNEG 851
>gi|428223611|ref|YP_007107708.1| ATPase [Geitlerinema sp. PCC 7407]
gi|427983512|gb|AFY64656.1| ATPase AAA-2 domain protein [Geitlerinema sp. PCC 7407]
Length = 822
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 152/278 (54%), Positives = 208/278 (74%), Gaps = 13/278 (4%)
Query: 8 VGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFG 67
VG+ P+RPI+S LF+GPTGVGKTELA ALA FGS+EAM+R+DMSE+ME HTVSK G
Sbjct: 530 VGLGSPHRPIASLLFSGPTGVGKTELAKALAATVFGSEEAMIRLDMSEFMEAHTVSKLIG 589
Query: 68 SPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVD 127
SPPG+VG++ GGQLTEAVR +P++V+L DEIEKAH DV N++LQLL+DGR+TD +G+ V
Sbjct: 590 SPPGFVGYDEGGQLTEAVRRKPYTVLLLDEIEKAHPDVFNLLLQLLEDGRLTDARGRVVS 649
Query: 128 LKNTIIIMTSNIGDSVIARESI-LG----SDQMERG--------VAEELRRRFRPEFLNR 174
KNT+II+TSN+G I + + LG D+ E V EEL++ FRPEFLNR
Sbjct: 650 FKNTLIILTSNLGSRAIEKNGLGLGFAATGDEAETAQYQRVRSQVNEELKQYFRPEFLNR 709
Query: 175 IDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARP 234
+DE+IVFR+L + +L ++ +++++E+ +RL + + L +T K +LI+EGY+PSYGARP
Sbjct: 710 LDEIIVFRRLTRDELAQVAELLIREVGDRLSEQGITLVLTDAVKHRLIDEGYSPSYGARP 769
Query: 235 LRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
LRRA+ RL+ED+LAE +L G + GD+ +D D G V
Sbjct: 770 LRRAVTRLVEDHLAEAMLAGQLHSGDTAVLDLDDDGQV 807
>gi|403225132|gb|AFR24744.1| ATP-dependent clp protease ATP-binding subunit [uncultured
Pelagomonas]
Length = 833
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 157/282 (55%), Positives = 206/282 (73%), Gaps = 16/282 (5%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG+R+PNRPI+SFLF+GPTGVGKTEL ALA +FG++++MVR+DMSEYME+HT
Sbjct: 530 AIRRARVGLRNPNRPIASFLFSGPTGVGKTELTKALALFFFGAEDSMVRLDMSEYMERHT 589
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V+K GSPPGYVG+ GGQLTEAVR +P++V+LFDEIEK H DV N++LQ+L+DGR+TD
Sbjct: 590 VAKLIGSPPGYVGYSEGGQLTEAVRRKPYTVVLFDEIEKGHPDVFNLLLQILEDGRLTDS 649
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS----------------DQMERGVAEELRR 165
KG+T+D KNT+II+TSN+G I + GS +M V EEL+R
Sbjct: 650 KGRTIDFKNTMIILTSNVGAKAIQNAAGSGSGLGFDSPDTNDEDSEYTRMAELVNEELKR 709
Query: 166 RFRPEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEG 225
FRPEFLNR+DEVI+F+QL K L +I DIML ++ R + +N L VT K LI+EG
Sbjct: 710 FFRPEFLNRLDEVIIFQQLTKRDLGQIADIMLAQLCARTKDQNFTLNVTPRAKDLLIDEG 769
Query: 226 YNPSYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
++P YGARPLRRAI +LLED LA+ +L+ I+ V +D +
Sbjct: 770 FDPIYGARPLRRAIMKLLEDKLAQTVLSESIEPDSLVLVDVN 811
>gi|311029019|ref|ZP_07707109.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus sp. m3-13]
Length = 812
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 152/278 (54%), Positives = 206/278 (74%), Gaps = 9/278 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+RIDMSEYMEKH+ S+
Sbjct: 528 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESIFGDEDAMIRIDMSEYMEKHSTSR 587
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPGYVG++ GGQLTE VR +P+SVIL DEIEKAH DV N++LQ+L+DGR+TD KG+
Sbjct: 588 LVGSPPGYVGYDEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGR 647
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSD---------QMERGVAEELRRRFRPEFLNRI 175
TVD +NT++IMTSN+G + R +G + M+ V EEL++ FRPEFLNR+
Sbjct: 648 TVDFRNTLVIMTSNVGADALKRNKYVGFNVQDENQNYKDMKGKVMEELKKAFRPEFLNRV 707
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
DE+IVF L K L EIV ++ +++ +RL+ ++++L +T K+K+ EEGY+P YGARPL
Sbjct: 708 DEMIVFHSLEKTHLKEIVTLLSEQLTKRLKEQDIDLELTEAAKEKISEEGYDPEYGARPL 767
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
RRAI + +ED L+E +L G I+ G +++D G V+
Sbjct: 768 RRAIQKHVEDKLSEELLRGNIEKGKKISLDVVDGEFVV 805
>gi|158319507|ref|YP_001512014.1| ATPase [Alkaliphilus oremlandii OhILAs]
gi|158139706|gb|ABW18018.1| ATPase AAA-2 domain protein [Alkaliphilus oremlandii OhILAs]
Length = 813
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 152/284 (53%), Positives = 209/284 (73%), Gaps = 12/284 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG++DP RPI SF+F GPTGVGKTEL+ ALA FG+++ M+RIDMSEYMEKHT
Sbjct: 524 AIRRARVGLKDPKRPIGSFIFLGPTGVGKTELSKALAESMFGNEDDMIRIDMSEYMEKHT 583
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ GSPPGYVGF+ GGQLTE VR +P+SV+LFDEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 584 VSRLIGSPPGYVGFDEGGQLTEKVRRKPYSVVLFDEIEKAHPDVFNILLQILDDGRLTDA 643
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG------------SDQMERGVAEELRRRFRP 169
+G+TVD KNT+IIMTSN+G I ++ ILG ++M+ + +ELRR FRP
Sbjct: 644 QGRTVDFKNTVIIMTSNVGAHTIKKQKILGFAASQEESAQNEYEKMKENIMDELRRTFRP 703
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNRID++IVF L + + +IVD++L ++ RL+A ++L ++ K + ++G++P
Sbjct: 704 EFLNRIDDIIVFHGLEREDIGKIVDLLLVDLKSRLKALEIDLEISEEAKNYIADKGFDPQ 763
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
+GARPL+R I R +E+ L+E +L G I+ G +V +D G VI
Sbjct: 764 FGARPLKREIQRTVENQLSEELLRGSIKAGSTVLVDLSDGKIVI 807
>gi|419720434|ref|ZP_14247667.1| negative regulator of genetic competence ClpC/MecB
[Lachnoanaerobaculum saburreum F0468]
gi|383303387|gb|EIC94839.1| negative regulator of genetic competence ClpC/MecB
[Lachnoanaerobaculum saburreum F0468]
Length = 831
Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 161/280 (57%), Positives = 200/280 (71%), Gaps = 11/280 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R RVG++DP RPI SFLF GPTGVGKTEL+ ALA+ FGS+ A++R+DMSEYMEKH+
Sbjct: 528 AIRRGRVGLKDPKRPIGSFLFLGPTGVGKTELSKALAYSIFGSENALIRVDMSEYMEKHS 587
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ GSPPGYVG+E GGQL+E VR P+SVILFDEIEKAH DV N++LQ+LDDG +TD
Sbjct: 588 VSRMVGSPPGYVGYEEGGQLSEKVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDS 647
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----SD------QMERGVAEELRRRFRPEF 171
G+ VD KNT+II+TSN G I LG SD M+ V EE+++ F+PEF
Sbjct: 648 SGRMVDFKNTVIILTSNAGAQRIIEPKQLGFASNSDDKKDYSDMKNSVMEEVKQMFKPEF 707
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERL-EAKNMELTVTHTFKKKLIEEGYNPSY 230
LNRIDE IVF QL K L EI+DI+LKEI RL E M L +T K+ LI++GY+ Y
Sbjct: 708 LNRIDETIVFHQLTKEDLKEILDILLKEINSRLDEQMQMNLRLTDKAKEFLIDKGYDKKY 767
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGG 270
GARPL+RA+ +ED LAE IL G I+ GD + +DC G
Sbjct: 768 GARPLKRALQNEIEDRLAEQILFGNIKQGDKIKIDCKGEG 807
>gi|239825665|ref|YP_002948289.1| ATPase AAA [Geobacillus sp. WCH70]
gi|239805958|gb|ACS23023.1| ATPase AAA-2 domain protein [Geobacillus sp. WCH70]
Length = 811
Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 153/282 (54%), Positives = 206/282 (73%), Gaps = 9/282 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++A++RIDMSEYMEKH+
Sbjct: 524 AVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEAMFGDEDALIRIDMSEYMEKHS 583
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG+E GGQLTE VR +P+SV+L DE+EKAH DV N++LQ+L+DGR+TD
Sbjct: 584 TSRLIGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEMEKAHPDVFNILLQVLEDGRLTDS 643
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG-----SDQ----MERGVAEELRRRFRPEFL 172
KG+TVD +NTIIIMTSN+G + R +G DQ M+ V +EL++ FRPEFL
Sbjct: 644 KGRTVDFRNTIIIMTSNVGADALKRNKYVGFNIQDEDQKYKDMKGKVMDELKKAFRPEFL 703
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE+IVF L K L EIV +M +++ +RL+ ++++L +T +K++ EGY+P YGA
Sbjct: 704 NRIDEIIVFHSLEKQHLKEIVKLMAEQLVKRLKEQDIDLELTDAAIEKIVSEGYDPEYGA 763
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
RPLRRA+ + +ED L+E +L G I G V +D G V++
Sbjct: 764 RPLRRALQKHVEDRLSEELLKGTIAKGQKVVVDVKDGEFVVL 805
>gi|295694806|ref|YP_003588044.1| ATPase AAA-2 domain-containing protein [Kyrpidia tusciae DSM 2912]
gi|295410408|gb|ADG04900.1| ATPase AAA-2 domain protein [Kyrpidia tusciae DSM 2912]
Length = 814
Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 157/293 (53%), Positives = 206/293 (70%), Gaps = 10/293 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FG + A+VRIDMSEYME+HT
Sbjct: 522 AIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEAMFGDENAVVRIDMSEYMERHT 581
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ G+PPGYVG+E GGQLTE +R +P+SV+L DEIEKAH +V N++LQ+LDDGR+TDG
Sbjct: 582 TSRLIGAPPGYVGYEEGGQLTEKIRRKPYSVVLLDEIEKAHPEVFNILLQVLDDGRLTDG 641
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
KG+TVD +NT+IIMTSN+G I R LG M+ V EEL+R+FRPEF
Sbjct: 642 KGRTVDFRNTVIIMTSNVGAQSIRRGGPLGFAARSEEEDAYKDMKNKVMEELKRQFRPEF 701
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNRIDEVIVF L + +M IVD+M+ ++ +RL +++ +T K L +EG++P+YG
Sbjct: 702 LNRIDEVIVFHALTQQDIMRIVDLMVDDLRKRLRDHDIDFELTDDAKAFLAKEGFDPTYG 761
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMTV 284
ARPL+RAI R +ED L+E +L G I GD V +D G + + + TV
Sbjct: 762 ARPLKRAIQRHIEDRLSEALLNGTIVKGDRVRIDFQDGALTVRKLEPSSARTV 814
>gi|404482398|ref|ZP_11017625.1| hypothetical protein HMPREF1135_00685 [Clostridiales bacterium
OBRC5-5]
gi|404344559|gb|EJZ70916.1| hypothetical protein HMPREF1135_00685 [Clostridiales bacterium
OBRC5-5]
Length = 829
Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 158/276 (57%), Positives = 201/276 (72%), Gaps = 11/276 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R RVG++DP RPI SFLF GPTGVGKTEL+ ALA+ FGS+ A++R+DMSEYMEKH+
Sbjct: 528 AIRRGRVGLKDPKRPIGSFLFLGPTGVGKTELSKALAYSMFGSESALIRVDMSEYMEKHS 587
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG++ GGQL+E VR P+SVILFDEIEKAH DV N++LQ+LDDG +TD
Sbjct: 588 VSKMVGSPPGYVGYDEGGQLSEKVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDS 647
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----SDQ------MERGVAEELRRRFRPEF 171
G+TVD KNT+II+TSN G I LG SD M+ V +E+++ F+PEF
Sbjct: 648 SGRTVDFKNTVIILTSNAGAQRIVEPKHLGFASNSDDEKDYSAMKSNVMDEVKQMFKPEF 707
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERL-EAKNMELTVTHTFKKKLIEEGYNPSY 230
LNRIDE IVF QL + L EI+DI+LKEI RL E M L +T K+ LI++GY+ Y
Sbjct: 708 LNRIDETIVFHQLTRDNLKEILDILLKEINNRLSEQMQMNLKLTEKAKEFLIDKGYDKKY 767
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
GARPL+RA+ +ED +AE IL G ++ GDS+ +DC
Sbjct: 768 GARPLKRALQNEIEDKMAEQILLGNVKQGDSLKVDC 803
>gi|315651740|ref|ZP_07904745.1| ABC superfamily ATP binding cassette transporter ABC protein
[Lachnoanaerobaculum saburreum DSM 3986]
gi|315485995|gb|EFU76372.1| ABC superfamily ATP binding cassette transporter ABC protein
[Lachnoanaerobaculum saburreum DSM 3986]
Length = 831
Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 161/280 (57%), Positives = 200/280 (71%), Gaps = 11/280 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R RVG++DP RPI SFLF GPTGVGKTEL+ ALA+ FGS+ A++R+DMSEYMEKH+
Sbjct: 528 AIRRGRVGLKDPKRPIGSFLFLGPTGVGKTELSKALAYSIFGSENALIRVDMSEYMEKHS 587
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ GSPPGYVG+E GGQL+E VR P+SVILFDEIEKAH DV N++LQ+LDDG +TD
Sbjct: 588 VSRMVGSPPGYVGYEEGGQLSEKVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDS 647
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----SD------QMERGVAEELRRRFRPEF 171
G+ VD KNT+II+TSN G I LG SD M+ V EE+++ F+PEF
Sbjct: 648 SGRMVDFKNTVIILTSNAGAQRIIEPKQLGFASNSDDKKDYSDMKNSVMEEVKQMFKPEF 707
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERL-EAKNMELTVTHTFKKKLIEEGYNPSY 230
LNRIDE IVF QL K L EI+DI+LKEI RL E M L +T K+ LI++GY+ Y
Sbjct: 708 LNRIDETIVFHQLTKEDLKEILDILLKEINSRLDEQMQMNLRLTDKAKEFLIDKGYDKKY 767
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGG 270
GARPL+RA+ +ED LAE IL G I+ GD + +DC G
Sbjct: 768 GARPLKRALQNEIEDRLAEQILFGNIKQGDKIKIDCKGEG 807
>gi|319654839|ref|ZP_08008914.1| class III stress response-like ATPase [Bacillus sp. 2_A_57_CT2]
gi|317393402|gb|EFV74165.1| class III stress response-like ATPase [Bacillus sp. 2_A_57_CT2]
Length = 816
Score = 321 bits (822), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 154/289 (53%), Positives = 205/289 (70%), Gaps = 9/289 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+RIDMSEYMEKH+ S+
Sbjct: 526 RARAGLKDPKRPIGSFVFLGPTGVGKTELARALAEAMFGDEDAMIRIDMSEYMEKHSTSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPGYVG+E GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+L+DGR+TD KG+
Sbjct: 586 LVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSD---------QMERGVAEELRRRFRPEFLNRI 175
TVD +NT++IMTSN+G + R +G + M+ V EE+++ FRPEFLNRI
Sbjct: 646 TVDFRNTVLIMTSNVGAEALKRNKYVGFNIQDGEQDYKDMKGKVMEEMKKSFRPEFLNRI 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
DE+IVF L K L EIV +M + +RL+ +++ L +T K+K+ EGY+P YGARPL
Sbjct: 706 DEIIVFHALEKKHLQEIVSLMSDTLTKRLKEQDITLELTDAAKEKISVEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMTV 284
RRAI + +ED L+E +L G + G SV +D G V+ +G+ +
Sbjct: 766 RRAIQKHIEDRLSEELLKGTVLTGQSVVIDVKDGEFVVKTAEPSGTANL 814
>gi|320451090|ref|YP_004203186.1| ATP-dependent chaperone protein ClpB [Thermus scotoductus SA-01]
gi|320151259|gb|ADW22637.1| ATP-dependent chaperone protein ClpB [Thermus scotoductus SA-01]
Length = 861
Score = 321 bits (822), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 157/273 (57%), Positives = 199/273 (72%), Gaps = 2/273 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DPNRPI SFLF GPTGVGKTELA LA F ++EAMVRIDM+EYMEKH
Sbjct: 580 AIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMVRIDMTEYMEKHA 639
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEAVR RP++VILFDEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 640 VSRLIGAPPGYVGYEEGGQLTEAVRRRPYTVILFDEIEKAHPDVFNILLQILDDGRLTDS 699
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR--ESILGSDQMERGVAEELRRRFRPEFLNRIDEVI 179
G+TVD +NT+II+TSN+G +I + L +++ V L++ FRPEFLNR+DE++
Sbjct: 700 HGRTVDFRNTVIILTSNLGSPLILEGIQKGLPYERIREEVFAVLQKHFRPEFLNRLDEIV 759
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VFR L + QL EIV+I L+ + RL K + LT+T K L E GY+P +GARPL+R I
Sbjct: 760 VFRPLTREQLREIVEIQLQSLRARLAEKRITLTLTEAAKDYLAERGYDPVFGARPLKRVI 819
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
R LE LA IL G I+ GD+V +D G V
Sbjct: 820 ARELETPLAVKILAGEIKEGDAVVVDAGPTGLV 852
>gi|223939247|ref|ZP_03631128.1| ATP-dependent chaperone ClpB [bacterium Ellin514]
gi|223892079|gb|EEF58559.1| ATP-dependent chaperone ClpB [bacterium Ellin514]
Length = 869
Score = 321 bits (822), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 157/271 (57%), Positives = 199/271 (73%), Gaps = 6/271 (2%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
R+R G++DPNRPI SF+F GPTGVGKTELA ALA F + AMVRIDMSEYMEKH V++
Sbjct: 591 RSRSGLQDPNRPIGSFIFLGPTGVGKTELARALAEFLFDDENAMVRIDMSEYMEKHAVAR 650
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E GGQL+EAVR RP+SV+LFDEIEKAH DV N++LQ+LDDGR+TDG+G+
Sbjct: 651 LVGAPPGYVGYEEGGQLSEAVRRRPYSVVLFDEIEKAHHDVFNILLQVLDDGRLTDGQGR 710
Query: 125 TVDLKNTIIIMTSNIGDSVI------ARESILGSDQMERGVAEELRRRFRPEFLNRIDEV 178
TVD KNTIIIMTSNIG +I + S G +ME+ V EL+ FRPEFLNR+D+V
Sbjct: 711 TVDFKNTIIIMTSNIGSPIIQEFYGSGKMSAKGHAEMEQLVRMELKAHFRPEFLNRVDDV 770
Query: 179 IVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRA 238
I+F LN+ QL IVDI L + +RLE ++L V + K+ + +EGY+P +GARPL+R
Sbjct: 771 IIFHSLNEEQLSHIVDIQLNRLGKRLEQHKLQLDVDKSAKQLIAKEGYDPLFGARPLKRT 830
Query: 239 IGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
I LL D LA IL G + GD + ++ G
Sbjct: 831 IQELLLDPLAMKILEGEFKSGDRIKVEAQDG 861
>gi|402311568|ref|ZP_10830509.1| negative regulator of genetic competence ClpC/MecB [Lachnospiraceae
bacterium ICM7]
gi|400371740|gb|EJP24690.1| negative regulator of genetic competence ClpC/MecB [Lachnospiraceae
bacterium ICM7]
Length = 829
Score = 321 bits (822), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 156/276 (56%), Positives = 199/276 (72%), Gaps = 11/276 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R RVG++DP RPI SFLF GPTGVGKTEL+ ALA+ FGS+ A++R+DMSEYMEKH+
Sbjct: 528 AIRRGRVGLKDPKRPIGSFLFLGPTGVGKTELSKALAYSMFGSESALIRVDMSEYMEKHS 587
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG++ GGQL+E VR P+SVILFDEIEKAH DV N++LQ+LDDG +TD
Sbjct: 588 VSKMVGSPPGYVGYDEGGQLSEKVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDS 647
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
G+TVD KNT+II+TSN G I LG M+ V +E+++ F+PEF
Sbjct: 648 SGRTVDFKNTVIILTSNAGAQRIVEPKHLGFASNTDDEKDYSAMKNNVMDEVKQMFKPEF 707
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERL-EAKNMELTVTHTFKKKLIEEGYNPSY 230
LNRIDE IVF QL + L EI+DI+LKEI RL E M L +T K+ LI++GY+ Y
Sbjct: 708 LNRIDETIVFHQLTRDNLKEILDILLKEINNRLSEQMQMNLKLTEKAKEFLIDKGYDKKY 767
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
GARPL+RA+ +ED +AE IL G ++ GDS+ +DC
Sbjct: 768 GARPLKRALQNEIEDKMAEQILLGNVKQGDSLKVDC 803
>gi|188584788|ref|YP_001916333.1| ATPase AAA [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179349475|gb|ACB83745.1| ATPase AAA-2 domain protein [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 814
Score = 320 bits (821), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 157/275 (57%), Positives = 201/275 (73%), Gaps = 9/275 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+R+DMSEYMEKHT
Sbjct: 531 AIRRARSGLKDPKRPIGSFIFLGPTGVGKTELARALADVLFGDEDAMIRLDMSEYMEKHT 590
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ GSPPGYVG E GQLTE VR RP+SVIL DEIEKAH +V N +LQ+L+DGR+TD
Sbjct: 591 VSRLLGSPPGYVGHEESGQLTEKVRRRPYSVILLDEIEKAHPEVFNTLLQVLEDGRLTDA 650
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+TVD +NT+IIMTSN+G ++I ES +G +M+ V EL+ FRPEFL
Sbjct: 651 KGRTVDFRNTVIIMTSNVGANLIRNESKVGFKPQTSEDSYKEMKDNVMSELKNSFRPEFL 710
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NR+DEVIVF L K L +IV++ML+E+ ER+ NM L T KK L E+GY+P+YGA
Sbjct: 711 NRVDEVIVFHALEKEHLSDIVELMLEELKERMAEFNMNLEFTEESKKHLAEQGYDPTYGA 770
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RPLRR I + +ED L+E +L+G G++V +D +
Sbjct: 771 RPLRRVIQKQVEDVLSEKMLSGEFAHGETVVIDAE 805
>gi|148658159|ref|YP_001278364.1| ATPase [Roseiflexus sp. RS-1]
gi|148570269|gb|ABQ92414.1| ATPase AAA-2 domain protein [Roseiflexus sp. RS-1]
Length = 825
Score = 320 bits (821), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 151/285 (52%), Positives = 204/285 (71%), Gaps = 8/285 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA F S++AM R+DMSE+ E+HT
Sbjct: 525 AIRRARSGLKDPRRPIGSFIFVGPTGVGKTELAKALAEFLFDSEDAMTRVDMSEFQERHT 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GQLTE++R RP+ V+LFDEIEKAH DV N +LQLLDDGR+TD
Sbjct: 585 VSRLIGAPPGYVGYEEAGQLTESIRRRPYQVVLFDEIEKAHPDVFNTLLQLLDDGRLTDA 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESI--------LGSDQMERGVAEELRRRFRPEFLN 173
+G TVD +NT+IIMTSN+G + ++S+ + V E LR+ FRPEFLN
Sbjct: 645 QGHTVDFRNTVIIMTSNVGTEHVRQQSLGLVRTHDRNAEEAARERVFEALRQAFRPEFLN 704
Query: 174 RIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGAR 233
RIDE+IVF L + +LM+IVD++++E+ ERL + + L +T T KK L+ EGYNP+YGAR
Sbjct: 705 RIDEIIVFHALTEQELMQIVDLLVREVDERLREQGLTLELTPTAKKLLVREGYNPAYGAR 764
Query: 234 PLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHR 278
PLRR + RL+E L+ +L G + GD++ +D D + + + R
Sbjct: 765 PLRRTVQRLVETPLSRNLLRGLFKPGDTILVDVDPQTDALTFTRR 809
>gi|89100727|ref|ZP_01173582.1| class III stress response-related ATPase [Bacillus sp. NRRL
B-14911]
gi|89084544|gb|EAR63690.1| class III stress response-related ATPase [Bacillus sp. NRRL
B-14911]
Length = 817
Score = 320 bits (821), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 153/278 (55%), Positives = 203/278 (73%), Gaps = 9/278 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+RIDMSEYMEKH+ S+
Sbjct: 526 RARAGLKDPKRPIGSFVFLGPTGVGKTELARALAEAMFGDEDAMIRIDMSEYMEKHSTSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPGYVG+E GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+L+DGR+TD KG+
Sbjct: 586 LVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSD---------QMERGVAEELRRRFRPEFLNRI 175
TVD +NT++IMTSN+G + R +G + M+ V EEL++ FRPEFLNRI
Sbjct: 646 TVDFRNTVLIMTSNVGAEALKRNKYVGFNIQDGEQDYKDMKGKVMEELKKAFRPEFLNRI 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
DE+IVF L K L EIV ++ ++ +RL+ + + L +T K+K+ EEGY+P YGARPL
Sbjct: 706 DEIIVFHALEKKHLKEIVTLLSDQLVKRLQEQEIVLGLTDKAKEKISEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
RRAI + +ED L+E +L G + G +V +D + G V+
Sbjct: 766 RRAIQKHIEDRLSEELLKGQVLTGQNVIIDVEDGEFVV 803
>gi|392958574|ref|ZP_10324083.1| Class III stress response-related ATPase, ClpC [Bacillus macauensis
ZFHKF-1]
gi|391875475|gb|EIT84086.1| Class III stress response-related ATPase, ClpC [Bacillus macauensis
ZFHKF-1]
Length = 810
Score = 320 bits (821), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 156/281 (55%), Positives = 203/281 (72%), Gaps = 9/281 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA A+A FG ++A++RIDMSEYMEKHT
Sbjct: 523 AIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARAVAESLFGDEDAIIRIDMSEYMEKHT 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG E GGQLTE VR +P+SVIL DEIEKAH +V N++LQ+L+DGR+TD
Sbjct: 583 TSRLVGSPPGYVGHEEGGQLTEKVRRKPYSVILLDEIEKAHPEVFNILLQVLEDGRLTDS 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG-----SDQ----MERGVAEELRRRFRPEFL 172
KG+TVD +NT++IMTSN+G S + R LG DQ M+ V +EL++ FRPEFL
Sbjct: 643 KGRTVDFRNTVVIMTSNVGASTLKRNKTLGFTVHSEDQQYSDMKSKVMDELKKAFRPEFL 702
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE+IVF L K L EIV +M + +RL +++E+ +T K+ EEGY+P YGA
Sbjct: 703 NRIDEIIVFHGLEKKHLKEIVTLMADSLIQRLRDQDIEIELTDAALDKITEEGYDPDYGA 762
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
RPLRRA+ R +ED L+E +L G I G+ V +D D+ V+
Sbjct: 763 RPLRRALQRKIEDRLSEELLRGNISKGNVVKIDVDNNEFVV 803
>gi|297792419|ref|XP_002864094.1| hypothetical protein ARALYDRAFT_495173 [Arabidopsis lyrata subsp.
lyrata]
gi|297309929|gb|EFH40353.1| hypothetical protein ARALYDRAFT_495173 [Arabidopsis lyrata subsp.
lyrata]
Length = 946
Score = 320 bits (821), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 152/283 (53%), Positives = 206/283 (72%), Gaps = 13/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+RVG++DP+RPI++ LF GPTGVGKTEL ALA YFGS+E+M+R+DMSEYME+HT
Sbjct: 643 AVKRSRVGLKDPDRPIAAMLFCGPTGVGKTELTKALAANYFGSEESMLRLDMSEYMERHT 702
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGFE GG LTEA+R RP +V+LFDEIEKAH D+ N++LQL +DG +TD
Sbjct: 703 VSKLIGSPPGYVGFEEGGMLTEAIRRRPFTVVLFDEIEKAHPDIFNILLQLFEDGHLTDS 762
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARES------ILGSDQ-------MERGVAEELRRRFR 168
+G+ V KN +IIMTSN+G S IA+ IL D+ M+ V EEL+ FR
Sbjct: 763 QGRRVSFKNALIIMTSNVGSSAIAKGRHGSIGFILDDDEEAASYTGMKALVVEELKNYFR 822
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PE LNRIDE+++FRQL K Q+MEI+++ML+++ RL A + L V+ K+ + ++GY+P
Sbjct: 823 PELLNRIDEIVIFRQLEKAQMMEILNLMLQDLKSRLVALGVGLEVSEPVKELICKQGYDP 882
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGN 271
+YGARPLRR + ++ED L+E L G + GD+ + D GN
Sbjct: 883 AYGARPLRRTVTEIVEDPLSEAFLAGSFKPGDTAFVVLDDTGN 925
>gi|424827469|ref|ZP_18252273.1| negative regulator of genetic competence MecB/ClpC [Clostridium
sporogenes PA 3679]
gi|365980083|gb|EHN16120.1| negative regulator of genetic competence MecB/ClpC [Clostridium
sporogenes PA 3679]
Length = 811
Score = 320 bits (821), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 155/277 (55%), Positives = 206/277 (74%), Gaps = 12/277 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++ RARVG++DP RPI SF+F GPTGVGKTEL ALA FG++ M+R+DMSEYMEKH+
Sbjct: 525 SVRRARVGLKDPKRPIGSFIFLGPTGVGKTELTKALAEAMFGNENNMIRVDMSEYMEKHS 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ GSPPGYVG + GGQLTE VR P+SV+LFDEIEKAH +V N++LQ+L+DGR+TDG
Sbjct: 585 VSRLIGSPPGYVGHDEGGQLTEKVRTNPYSVVLFDEIEKAHPEVFNILLQILEDGRLTDG 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD------------QMERGVAEELRRRFRP 169
KG+TVD +NTIIIMTSN+G S I+R+ LG + +M+ + EL+ FRP
Sbjct: 645 KGKTVDFRNTIIIMTSNVGASTISRQKTLGFNTSIEEERETEYEKMKDNIMHELKHSFRP 704
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNRID++IVF QL + + EIV +MLK + R+E + ++L T +K L +EGY+ +
Sbjct: 705 EFLNRIDDIIVFHQLREEHIKEIVKLMLKIVSNRVEDQGIKLEFTEEAEKILAKEGYDTN 764
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
YGARPLRRAI +++ED L+E IL G I+ GDSV ++
Sbjct: 765 YGARPLRRAITKIVEDKLSEEILKGNIKKGDSVKVNT 801
>gi|387169509|gb|AFJ66170.1| hypothetical protein 11M19.14 [Arabidopsis halleri]
Length = 946
Score = 320 bits (821), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 152/283 (53%), Positives = 206/283 (72%), Gaps = 13/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+RVG++DP+RPI++ LF GPTGVGKTEL ALA YFGS+E+M+R+DMSEYME+HT
Sbjct: 643 AVKRSRVGLKDPDRPIAAMLFCGPTGVGKTELTKALAANYFGSEESMLRLDMSEYMERHT 702
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGFE GG LTEA+R RP +V+LFDEIEKAH D+ N++LQL +DG +TD
Sbjct: 703 VSKLIGSPPGYVGFEEGGMLTEAIRRRPFTVVLFDEIEKAHPDIFNILLQLFEDGHLTDS 762
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARES------ILGSDQ-------MERGVAEELRRRFR 168
+G+ V KN +IIMTSN+G S IA+ IL D+ M+ V EEL+ FR
Sbjct: 763 QGRRVSFKNALIIMTSNVGSSAIAKGRHGSIGFILDDDEEAASYTGMKALVVEELKNYFR 822
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PE LNRIDE+++FRQL K Q+MEI+++ML+++ RL A + L V+ K+ + ++GY+P
Sbjct: 823 PELLNRIDEIVIFRQLEKAQMMEILNLMLQDLKSRLVALGVGLEVSEPVKELICKQGYDP 882
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGN 271
+YGARPLRR + ++ED L+E L G + GD+ + D GN
Sbjct: 883 AYGARPLRRTVTEIVEDPLSEAFLAGSFKPGDTAFVVLDDTGN 925
>gi|308272261|emb|CBX28867.1| Chaperone protein clpB [uncultured Desulfobacterium sp.]
gi|308272381|emb|CBX28986.1| Chaperone protein clpB [uncultured Desulfobacterium sp.]
Length = 860
Score = 320 bits (821), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 158/277 (57%), Positives = 204/277 (73%), Gaps = 2/277 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DPNRPI SF+F GPTGVGKTELA ALA F S++AMVRIDMSEYMEKH
Sbjct: 586 AVRRARSGMQDPNRPIGSFIFMGPTGVGKTELAKALAEFIFDSEQAMVRIDMSEYMEKHA 645
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GG LTEAVR +P+SV+LFDEIEKAH +V NV+LQ+LDDGR+TDG
Sbjct: 646 VSRLIGAPPGYVGYDEGGYLTEAVRRKPYSVVLFDEIEKAHPEVFNVLLQILDDGRMTDG 705
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVF 181
G+TVD KNTIIIMTSN+G I I +ME V E L+ F+PEFLNRIDE I+F
Sbjct: 706 HGRTVDFKNTIIIMTSNVGSQWIQELGISRRKEMEERVTEALKASFKPEFLNRIDETIIF 765
Query: 182 RQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGR 241
L+ Q+ EIV I +K++ RL KN++L ++ K ++E+GY+P YGARPL+RAI +
Sbjct: 766 HNLSPEQIGEIVKIQIKKLEARLAEKNIKLVLSDDAVKLIVEKGYDPVYGARPLKRAIQK 825
Query: 242 LLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHR 278
LE+ L+ IL G IQ G V + G++I++ H+
Sbjct: 826 YLENPLSIEILKGEIQDGSIVLAEVQ--GDIIVFTHK 860
>gi|116070848|ref|ZP_01468117.1| ATPase [Synechococcus sp. BL107]
gi|116066253|gb|EAU72010.1| ATPase [Synechococcus sp. BL107]
Length = 862
Score = 320 bits (821), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 160/278 (57%), Positives = 200/278 (71%), Gaps = 6/278 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRPI+SFLF GPTGVGKTEL+ ALA F S EAMVRIDMSEYMEKHT
Sbjct: 588 AIQRSRAGLSDPNRPIASFLFLGPTGVGKTELSKALANRLFDSDEAMVRIDMSEYMEKHT 647
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEAVR RP++VILFDE+EKAH DV NVMLQ+LDDGRVTDG
Sbjct: 648 VSRLIGAPPGYVGYEAGGQLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDG 707
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQ---MERGVAEELRRRFRPEFLNRIDEV 178
+G+TVD NT++I+TSNIG I E DQ ME V E LR FRPEFLNR+D+
Sbjct: 708 QGRTVDFTNTVLILTSNIGSQSIL-ELAGDPDQHQAMESRVNEALRAHFRPEFLNRLDDQ 766
Query: 179 IVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRA 238
I+F L K +L +IV + + + +RLEA+ + L ++ L GY+P YGARPL+RA
Sbjct: 767 IIFHSLRKDELKQIVTLQVARLQQRLEARKLNLQLSPEASDWLANAGYDPVYGARPLKRA 826
Query: 239 IGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYR 276
I R LE +A+ IL G GD +++D S N + +R
Sbjct: 827 IQRELETPIAKAILAGRYSEGDVISLDVAS--NALAFR 862
>gi|423718349|ref|ZP_17692531.1| ATP-dependent Clp protease ATP-binding subunit clpA [Geobacillus
thermoglucosidans TNO-09.020]
gi|383365159|gb|EID42460.1| ATP-dependent Clp protease ATP-binding subunit clpA [Geobacillus
thermoglucosidans TNO-09.020]
Length = 810
Score = 320 bits (820), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 153/285 (53%), Positives = 205/285 (71%), Gaps = 9/285 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++A++RIDMSEYMEKH+
Sbjct: 523 AVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEAMFGDEDALIRIDMSEYMEKHS 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG+E GGQLTE VR +P+SV+L DE+EKAH DV N++LQ+L+DGR+TD
Sbjct: 583 TSRLIGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEMEKAHPDVFNILLQVLEDGRLTDS 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG-----SDQ----MERGVAEELRRRFRPEFL 172
KG+TVD +NTIIIMTSN+G + R +G DQ M+ V +EL+R FRPEFL
Sbjct: 643 KGRTVDFRNTIIIMTSNVGADALKRNKYVGFNVQDEDQKYKDMKGKVMDELKRAFRPEFL 702
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE+IVF L K L +IV +M + +RL+ ++++L +T +K++ EGY+P YGA
Sbjct: 703 NRIDEIIVFHSLEKQHLKQIVKLMADTLIKRLKEQDIDLELTDAAIEKIVSEGYDPEYGA 762
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRH 277
RPLRRA+ + +ED L+E +L G I G V +D G V++ +
Sbjct: 763 RPLRRALQKQVEDRLSEELLKGTIAKGQKVIVDVKDGEFVVLAKQ 807
>gi|187776547|ref|ZP_02993020.1| hypothetical protein CLOSPO_00059 [Clostridium sporogenes ATCC
15579]
gi|187775206|gb|EDU39008.1| ATPase family associated with various cellular activities (AAA)
[Clostridium sporogenes ATCC 15579]
Length = 814
Score = 320 bits (820), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 155/277 (55%), Positives = 206/277 (74%), Gaps = 12/277 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++ RARVG++DP RPI SF+F GPTGVGKTEL ALA FG++ M+R+DMSEYMEKH+
Sbjct: 528 SVRRARVGLKDPKRPIGSFIFLGPTGVGKTELTKALAEAMFGNENNMIRVDMSEYMEKHS 587
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ GSPPGYVG + GGQLTE VR P+SV+LFDEIEKAH +V N++LQ+L+DGR+TDG
Sbjct: 588 VSRLIGSPPGYVGHDEGGQLTEKVRTNPYSVVLFDEIEKAHPEVFNILLQILEDGRLTDG 647
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD------------QMERGVAEELRRRFRP 169
KG+TVD +NTIIIMTSN+G S I+R+ LG + +M+ + EL+ FRP
Sbjct: 648 KGKTVDFRNTIIIMTSNVGASTISRQKTLGFNTSIEEERETEYEKMKDNIMHELKHSFRP 707
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNRID++IVF QL + + EIV +MLK + R+E + ++L T +K L +EGY+ +
Sbjct: 708 EFLNRIDDIIVFHQLREEHIKEIVKLMLKIVSNRVEDQGIKLEFTEEAEKILAKEGYDTN 767
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
YGARPLRRAI +++ED L+E IL G I+ GDSV ++
Sbjct: 768 YGARPLRRAITKIVEDKLSEEILKGNIKKGDSVKVNT 804
>gi|312109233|ref|YP_003987549.1| ATPase AAA [Geobacillus sp. Y4.1MC1]
gi|336233627|ref|YP_004586243.1| ATPase AAA-2 domain-containing protein [Geobacillus
thermoglucosidasius C56-YS93]
gi|311214334|gb|ADP72938.1| ATPase AAA-2 domain protein [Geobacillus sp. Y4.1MC1]
gi|335360482|gb|AEH46162.1| ATPase AAA-2 domain protein [Geobacillus thermoglucosidasius
C56-YS93]
Length = 812
Score = 320 bits (820), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 153/285 (53%), Positives = 205/285 (71%), Gaps = 9/285 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++A++RIDMSEYMEKH+
Sbjct: 525 AVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEAMFGDEDALIRIDMSEYMEKHS 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG+E GGQLTE VR +P+SV+L DE+EKAH DV N++LQ+L+DGR+TD
Sbjct: 585 TSRLIGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEMEKAHPDVFNILLQVLEDGRLTDS 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG-----SDQ----MERGVAEELRRRFRPEFL 172
KG+TVD +NTIIIMTSN+G + R +G DQ M+ V +EL+R FRPEFL
Sbjct: 645 KGRTVDFRNTIIIMTSNVGADALKRNKYVGFNVQDEDQKYKDMKGKVMDELKRAFRPEFL 704
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE+IVF L K L +IV +M + +RL+ ++++L +T +K++ EGY+P YGA
Sbjct: 705 NRIDEIIVFHSLEKQHLKQIVKLMADTLIKRLKEQDIDLELTDAAIEKIVSEGYDPEYGA 764
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRH 277
RPLRRA+ + +ED L+E +L G I G V +D G V++ +
Sbjct: 765 RPLRRALQKQVEDRLSEELLKGTIAKGQKVIVDVKDGEFVVLAKQ 809
>gi|427421597|ref|ZP_18911780.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 7375]
gi|425757474|gb|EKU98328.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 7375]
Length = 820
Score = 320 bits (819), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 154/299 (51%), Positives = 209/299 (69%), Gaps = 13/299 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+RVG+R+PNRPI+S +F+GPTGVGKTELA ALA FG+++AM+R+DMSE+ME +
Sbjct: 522 AVRRSRVGMRNPNRPIASLIFSGPTGVGKTELAKALAASVFGAEDAMIRVDMSEFMEPQS 581
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG++ GGQLTEAVR +P++VIL DEIEKAH DV N++LQLLDDG + D
Sbjct: 582 VSKLIGSPPGYVGYDEGGQLTEAVRRKPYTVILLDEIEKAHPDVFNILLQLLDDGHLNDA 641
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-------------ESILGSDQMERGVAEELRRRFR 168
KG+ V KNT+IIMTSNIG VI + E + + V EE+++ FR
Sbjct: 642 KGRKVSFKNTLIIMTSNIGSKVIEKGGGGLGFELSTDDEMTSRYNNIRNLVNEEMKQFFR 701
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PE LNRIDE+IVFRQL K ++ +I DI+L ++ RL +N+ +T F++ L+ EGY+
Sbjct: 702 PELLNRIDEIIVFRQLIKQEVAQIADILLAQVTGRLAERNITFELTDAFREHLVNEGYDQ 761
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMTVCAR 287
+YGARP+RRAI RL+ED LAE +L G I GD+ D D V++ + ++ +R
Sbjct: 762 TYGARPMRRAISRLVEDYLAEALLAGTITDGDTAVFDLDDDARVLVRSAKQPALVGVSR 820
>gi|357012846|ref|ZP_09077845.1| ClpC [Paenibacillus elgii B69]
Length = 814
Score = 320 bits (819), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 154/287 (53%), Positives = 211/287 (73%), Gaps = 11/287 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RP+ SF+F GPTGVGKTELA ALA FG + A++RIDMSEYMEKH+
Sbjct: 523 AIRRARAGLKDPKRPMGSFIFLGPTGVGKTELARALAESLFGDENAVIRIDMSEYMEKHS 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ G+PPGYVG+E GGQLTE VR +P+SV+L DEIEKAH +V N++LQ+L+DGR+TD
Sbjct: 583 TSRLVGAPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDS 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
KG+TVD +NT+IIMTSN+G I R S LG + M+ V EL++ FRPEF
Sbjct: 643 KGRTVDFRNTLIIMTSNVGADTIKRNSTLGFTAAHDAGKDYNNMKEKVMGELKKSFRPEF 702
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNRIDE+IVF L + + EIV +M +E+ +RL+ + +E +T + K L +EGY+P++G
Sbjct: 703 LNRIDEIIVFHSLEEQHIAEIVTLMAEELRKRLKEQEVEFFLTDSAKAFLAKEGYDPAFG 762
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHR 278
ARPLRRAI + +ED L+E +L G I GDS+T+D + G +I++R++
Sbjct: 763 ARPLRRAIQKHIEDRLSEELLRGNISKGDSLTID-EKDGELIVHRNQ 808
>gi|260893780|ref|YP_003239877.1| ATPase AAA-2 domain-containing protein [Ammonifex degensii KC4]
gi|260865921|gb|ACX53027.1| ATPase AAA-2 domain protein [Ammonifex degensii KC4]
Length = 812
Score = 320 bits (819), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 155/282 (54%), Positives = 206/282 (73%), Gaps = 10/282 (3%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI F+F GPTGVGKTELA ALA FG +EAMVRIDMSEYME+HTVS+ G+
Sbjct: 530 GLKDPRRPIGVFIFLGPTGVGKTELAKALAEALFGDEEAMVRIDMSEYMERHTVSRLVGA 589
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG+E GGQLTEAVR RP++V+L DEIEKAH DV N++LQ+++DGR+TD KG+TVD
Sbjct: 590 PPGYVGYEEGGQLTEAVRRRPYTVVLLDEIEKAHPDVFNILLQIMEDGRLTDAKGRTVDF 649
Query: 129 KNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFLNRIDEVI 179
KNT+IIMTSNIG + RES LG + M+ + +EL R FRPEFLNR+DE+I
Sbjct: 650 KNTVIIMTSNIGARFLKRESPLGFRAEDEKAAFESMKEKILKELERTFRPEFLNRVDEII 709
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF L + IVD+MLK++ +RL+ + +E+ + K+ L ++GY+ ++GARPLRR I
Sbjct: 710 VFHPLTPEHIRAIVDLMLKDVAKRLKEQGVEVEFSDALKELLAQKGYDENFGARPLRRTI 769
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGS 281
RL+ED L+E +L G GD V +D ++ G V++ R G+
Sbjct: 770 QRLVEDRLSEEMLKGTFAKGDKVLVDAEN-GEVVVKREPVGA 810
>gi|255527257|ref|ZP_05394138.1| ATPase AAA-2 domain protein [Clostridium carboxidivorans P7]
gi|296187235|ref|ZP_06855631.1| negative regulator of genetic competence ClpC/MecB [Clostridium
carboxidivorans P7]
gi|255509042|gb|EET85401.1| ATPase AAA-2 domain protein [Clostridium carboxidivorans P7]
gi|296048106|gb|EFG87544.1| negative regulator of genetic competence ClpC/MecB [Clostridium
carboxidivorans P7]
Length = 812
Score = 320 bits (819), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 152/274 (55%), Positives = 204/274 (74%), Gaps = 12/274 (4%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RARVG++DP RPI SF+F GPTGVGKTEL+ ALA FG + M+R+DMSEYMEKHTVS+
Sbjct: 528 RARVGLKDPKRPIGSFIFLGPTGVGKTELSKALAEAMFGDENNMIRVDMSEYMEKHTVSR 587
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPGYVGF+ GGQLTE VR P+SV+LFDEIEKAH +V N++LQ+L+DGR+TDGKG+
Sbjct: 588 LIGSPPGYVGFDEGGQLTEKVRRNPYSVVLFDEIEKAHPEVFNILLQILEDGRLTDGKGK 647
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG------------SDQMERGVAEELRRRFRPEFL 172
T++ KNTIIIMTSN+G S I ++ +G ++M+ V EEL+R FRPEFL
Sbjct: 648 TINFKNTIIIMTSNVGASTIKKQKSMGFALGGKNEKENEYEKMKENVMEELKRSFRPEFL 707
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRID++IVF QL + L IV +MLK + RL+ +++ + T +K L +EG++ +YGA
Sbjct: 708 NRIDDIIVFHQLQEEDLNHIVKLMLKTVDARLKEQDIYIEFTEEAQKNLAKEGFDLTYGA 767
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
RPLRRAI +++ED L+E +L G I+ GD + ++
Sbjct: 768 RPLRRAITKIVEDKLSEEMLRGNIKKGDKIKVEV 801
>gi|54035914|sp|Q9RVI3.2|CLPB_DEIRA RecName: Full=Chaperone protein ClpB
Length = 852
Score = 320 bits (819), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 160/271 (59%), Positives = 195/271 (71%), Gaps = 2/271 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G+ DPNRP+ SF+F GP+GVGKTELA ALA F S +AMVRIDMSEYMEKHT
Sbjct: 573 AIRRARAGLNDPNRPLGSFMFLGPSGVGKTELAKALAEFLFDSSDAMVRIDMSEYMEKHT 632
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVGFE GGQLTEAVR RP++VILFDEIEKAH DV NV+LQ+LDDGR+TDG
Sbjct: 633 VARLIGAPPGYVGFEEGGQLTEAVRRRPYAVILFDEIEKAHPDVFNVLLQVLDDGRLTDG 692
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQ--MERGVAEELRRRFRPEFLNRIDEVI 179
+G+TVD +NT+IIMTSNIG +I G D ++ V +ELR FRPEFLNR+D++I
Sbjct: 693 QGRTVDFRNTLIIMTSNIGSPLILEMQQRGEDAETIKSAVMDELRGEFRPEFLNRVDDII 752
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF L L IVDI L + RL + + L +T K KL E GY+P+YGARPLRR I
Sbjct: 753 VFDALTAKDLQSIVDIQLGGLRRRLAERRITLHLTEDAKDKLAELGYDPAYGARPLRRTI 812
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGG 270
+ +E LA IL G IQ G + +D GG
Sbjct: 813 SQYIETPLAREILGGQIQDGSVLNVDYGDGG 843
>gi|387169538|gb|AFJ66198.1| hypothetical protein 7G9.17 [Boechera stricta]
Length = 943
Score = 319 bits (818), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 153/283 (54%), Positives = 205/283 (72%), Gaps = 13/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+RVG++DP+RPIS+ LF GPTGVGKTEL ALA YFGS+E+M+R+DMSEYME+HT
Sbjct: 644 AVKRSRVGLKDPDRPISAMLFCGPTGVGKTELTKALAANYFGSEESMLRLDMSEYMERHT 703
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGFE GG LTEA+R RP +V+LFDEIEKAH D+ N++LQL +DG +TD
Sbjct: 704 VSKLIGSPPGYVGFEEGGMLTEAIRRRPFTVVLFDEIEKAHPDIFNILLQLFEDGHLTDS 763
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARES------ILGSDQ-------MERGVAEELRRRFR 168
+G+ V KN +IIMTSN+G S IA+ IL D+ M+ V EEL+ FR
Sbjct: 764 QGRRVSFKNALIIMTSNVGSSAIAKGRHGSIGFILEDDEEAASYTGMKALVVEELKNYFR 823
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PE LNRIDE+++FRQL K Q+MEI+++ML+++ RL A + L V+ K+ + +GY+P
Sbjct: 824 PELLNRIDEIVIFRQLEKAQMMEILNLMLQDLKSRLVALGVGLEVSEAVKELICIQGYDP 883
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGN 271
+YGARPLRR + ++ED L+E L G + GD+ + D GN
Sbjct: 884 AYGARPLRRTVTEIVEDPLSEAFLAGSFKPGDTAFVVLDDTGN 926
>gi|390442268|ref|ZP_10230280.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis sp. T1-4]
gi|389834447|emb|CCI34406.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis sp. T1-4]
Length = 795
Score = 319 bits (818), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 154/289 (53%), Positives = 208/289 (71%), Gaps = 12/289 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARV +++PNRPI+SF+F GPTGVGKTEL ALA FGS+ +M+R+DMSE+ME HT
Sbjct: 490 AIRRARVNLKNPNRPIASFIFAGPTGVGKTELTKALAKLLFGSESSMIRLDMSEFMESHT 549
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK G+PPGY+G+ GGQLTEAVR +P+ V+LFDEIEKAH DV N++LQLL+DG +TD
Sbjct: 550 VSKLIGAPPGYIGYNEGGQLTEAVRRQPYRVVLFDEIEKAHPDVFNLLLQLLEDGHLTDS 609
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-ESILGSD-----------QMERGVAEELRRRFRP 169
+G+ VD KNT+IIMTSNIG VI + LG + Q+ V EEL++ FRP
Sbjct: 610 QGRRVDFKNTLIIMTSNIGSKVIEKGGKSLGFEIADDFAQSRYQQISNRVTEELKQYFRP 669
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL + ++ +I DI++ ++ ++L K + + VT FK +I EGY+PS
Sbjct: 670 EFLNRLDEIIVFRQLTREEVTQIADILIADLAKQLTEKGISVQVTAAFKDLVINEGYDPS 729
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHR 278
YGARPLRRA+ R LED+LA +L+G + GD +D + V + H+
Sbjct: 730 YGARPLRRALTRRLEDSLAVAMLSGKVNSGDHAILDVTAEAVVTVSSHQ 778
>gi|300088518|ref|YP_003759040.1| ATPase AAA-2 domain-containing protein [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299528251|gb|ADJ26719.1| ATPase AAA-2 domain protein [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 810
Score = 319 bits (818), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 156/276 (56%), Positives = 202/276 (73%), Gaps = 11/276 (3%)
Query: 3 LERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTV 62
+ R+R G++DP RPI SFLF GPTGVGKTELA +LA+ FG + AMVRIDMSEY E+HTV
Sbjct: 523 IRRSRAGLKDPRRPIGSFLFLGPTGVGKTELARSLAWFMFGDETAMVRIDMSEYQERHTV 582
Query: 63 SKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGK 122
S+ G+PPGY+GFE GGQLTEAVR RP+ VIL DE+EKAH +V NV+LQLLDDGR+TDG+
Sbjct: 583 SRMVGAPPGYIGFEEGGQLTEAVRKRPYRVILLDEVEKAHPEVFNVLLQLLDDGRLTDGQ 642
Query: 123 GQTVDLKNTIIIMTSNIGDSVIARESIL-----------GSDQMERGVAEELRRRFRPEF 171
G+TVD KNT++IMTSN G I RES L G ++M+ V E+R++FRPEF
Sbjct: 643 GRTVDFKNTVVIMTSNAGVETIRRESRLGFVTGEGNGKEGYEKMKDKVLGEVRKQFRPEF 702
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
+NRIDE+IVF +L + QL +VD+M K++ RLE ++L +T K L + GY+P YG
Sbjct: 703 INRIDEIIVFHELAEEQLRHVVDLMAKDVESRLEEMEIKLEITEAAKGWLAKVGYDPVYG 762
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
ARPLRRAI + +E+ LA +L G + G VT+D +
Sbjct: 763 ARPLRRAIEKYVENPLATRLLKGEFKEGSKVTVDLE 798
>gi|197120833|ref|YP_002132784.1| ATP-dependent chaperone ClpB [Anaeromyxobacter sp. K]
gi|196170682|gb|ACG71655.1| ATP-dependent chaperone ClpB [Anaeromyxobacter sp. K]
Length = 870
Score = 319 bits (818), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 155/286 (54%), Positives = 206/286 (72%), Gaps = 3/286 (1%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DPNRPI SF+F GPTGVGKTE A ALA F + AMVR+DMSEYMEKHT
Sbjct: 584 AVRRARSGLQDPNRPIGSFIFLGPTGVGKTETARALAQFLFDDERAMVRLDMSEYMEKHT 643
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEAVR RP++V+LFDEIEKAH DV NV+LQ+LDDGR+TDG
Sbjct: 644 VSRLIGAPPGYVGYEEGGQLTEAVRRRPYAVVLFDEIEKAHHDVFNVLLQILDDGRLTDG 703
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-ESILGSD--QMERGVAEELRRRFRPEFLNRIDEV 178
+G+TVD +NT+IIMTSNIG + I R G+D Q+ E LR FRPEFLNR+DE+
Sbjct: 704 QGRTVDFRNTVIIMTSNIGSADIQRLAGRPGADMQQIREAALEHLRGEFRPEFLNRVDEI 763
Query: 179 IVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRA 238
+VFR L + + IV+I L + + +E +++ L +T ++ + + GY+P YGARPL+RA
Sbjct: 764 VVFRPLGREDVGRIVEIQLARLRKLIEERHVTLELTEAAREAIADAGYDPVYGARPLKRA 823
Query: 239 IGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMTV 284
I R+++D LA +L G + GD V +D GN++ + +TV
Sbjct: 824 IQRMVQDPLATRLLQGEFKAGDHVVVDEGKDGNIVFRKGERPEVTV 869
>gi|168181833|ref|ZP_02616497.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum Bf]
gi|237796972|ref|YP_002864524.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum Ba4 str. 657]
gi|182674884|gb|EDT86845.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum Bf]
gi|229263581|gb|ACQ54614.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium botulinum Ba4 str. 657]
Length = 811
Score = 319 bits (818), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 154/277 (55%), Positives = 206/277 (74%), Gaps = 12/277 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++ RARVG++DP RPI SF+F GPTGVGKTEL ALA FG++ M+R+DMSEYMEKH+
Sbjct: 525 SVRRARVGLKDPKRPIGSFIFLGPTGVGKTELTKALAEAMFGNENNMIRVDMSEYMEKHS 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ GSPPGYVG + GGQLT+ VR P+SV+LFDEIEKAH +V N++LQ+L+DGR+TDG
Sbjct: 585 VSRLIGSPPGYVGHDEGGQLTDKVRTNPYSVVLFDEIEKAHPEVFNILLQILEDGRLTDG 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD------------QMERGVAEELRRRFRP 169
KG+TVD +NTIIIMTSN+G S I+R+ LG + +M+ + EL+ FRP
Sbjct: 645 KGKTVDFRNTIIIMTSNVGASTISRQKTLGFNTSIEEERETEYEKMKDNIMNELKHSFRP 704
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNRID++IVF QL + + EIV +MLK + R++ + +EL T +K L +EGY+ +
Sbjct: 705 EFLNRIDDIIVFHQLREEHIREIVKLMLKTVSNRVKDQGIELEFTEEAEKILAKEGYDTN 764
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
YGARPLRRAI +++ED L+E IL G I+ GDSV ++
Sbjct: 765 YGARPLRRAITKIVEDKLSEEILKGNIKKGDSVKVNT 801
>gi|373468461|ref|ZP_09559713.1| negative regulator of genetic competence ClpC/MecB [Lachnospiraceae
bacterium oral taxon 082 str. F0431]
gi|371766197|gb|EHO54464.1| negative regulator of genetic competence ClpC/MecB [Lachnospiraceae
bacterium oral taxon 082 str. F0431]
Length = 831
Score = 319 bits (818), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 158/280 (56%), Positives = 199/280 (71%), Gaps = 11/280 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R RVG++DP RPI SFLF GPTGVGKTEL+ ALA+ FGS+ A++R+DMSEYMEKH+
Sbjct: 528 AIRRGRVGLKDPKRPIGSFLFLGPTGVGKTELSKALAYSMFGSENALIRVDMSEYMEKHS 587
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+E GGQL+E VR P+SVILFDEIEKAH DV N++LQ+LDDG +TD
Sbjct: 588 VSKMVGSPPGYVGYEEGGQLSEKVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDS 647
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----SD------QMERGVAEELRRRFRPEF 171
G+ +D KNT+II+TSN G I LG SD M+ V EE+++ F+PEF
Sbjct: 648 SGRMIDFKNTVIILTSNAGAQRIVEPKQLGFASSSDDKKDYSDMKNSVMEEVKQMFKPEF 707
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERL-EAKNMELTVTHTFKKKLIEEGYNPSY 230
LNRIDE IVF QL K L EI+DI+L EI RL E M L ++ K+ LI++GY+ Y
Sbjct: 708 LNRIDETIVFHQLTKENLKEILDILLNEINSRLDEQMQMNLRLSDKAKEFLIDKGYDKKY 767
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGG 270
GARPL+RA+ +ED +AE IL G I+ GD + +DC G
Sbjct: 768 GARPLKRALQNEIEDRMAEQILLGNIKQGDKIKVDCKGEG 807
>gi|387169561|gb|AFJ66220.1| hypothetical protein 34G24.25 [Capsella rubella]
Length = 945
Score = 319 bits (818), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 151/283 (53%), Positives = 206/283 (72%), Gaps = 13/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+RVG++DP+RPI++ LF GPTGVGKTEL ALA YFGS+E+M+R+DMSEYME+HT
Sbjct: 642 AVKRSRVGLKDPDRPIAAMLFCGPTGVGKTELTKALAANYFGSEESMLRLDMSEYMERHT 701
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGFE GG LTEA+R RP +V+LFDEIEKAH D+ N++LQL +DG +TD
Sbjct: 702 VSKLIGSPPGYVGFEEGGMLTEAIRRRPFTVVLFDEIEKAHPDIFNILLQLFEDGHLTDS 761
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARES------ILGSDQ-------MERGVAEELRRRFR 168
+G+ V KN +IIMTSN+G + IA+ IL D+ M+ V EEL+ FR
Sbjct: 762 QGRRVSFKNALIIMTSNVGSTAIAKGRHGSIGFILEDDEEAASYTGMKAMVVEELKNYFR 821
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PE LNRIDE+++FRQL K Q+MEI+++ML+++ RL A + L V+ K+ + ++GY+P
Sbjct: 822 PELLNRIDEIVIFRQLEKAQMMEILNLMLQDLKSRLVALGVGLEVSEAVKELICKQGYDP 881
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGN 271
+YGARPLRR + ++ED L+E L G + GD+ + D GN
Sbjct: 882 AYGARPLRRTVTEIVEDPLSEAFLAGSFKPGDTAFVVLDDTGN 924
>gi|425467581|ref|ZP_18846861.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9809]
gi|389829602|emb|CCI28914.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9809]
Length = 795
Score = 319 bits (818), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 154/289 (53%), Positives = 209/289 (72%), Gaps = 12/289 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARV +++PNRPI+SF+F GPTGVGKTEL ALA FGS+ +M+R+DMSE+ME HT
Sbjct: 490 AIRRARVNLKNPNRPIASFIFAGPTGVGKTELTKALAKLLFGSESSMIRLDMSEFMESHT 549
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK G+PPGY+G+ GGQLTEAVR +P+ V+LFDEIEKAH DV N++LQLL+DG +TD
Sbjct: 550 VSKLIGAPPGYIGYNEGGQLTEAVRRQPYRVVLFDEIEKAHPDVFNLLLQLLEDGHLTDS 609
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-ESILGSD-----------QMERGVAEELRRRFRP 169
+G+ VD KNT+IIMTSNIG VI + + LG + Q+ V EEL++ FRP
Sbjct: 610 QGRRVDFKNTLIIMTSNIGSKVIEKGGNSLGFEIADDFAQSRYQQISNRVTEELKQYFRP 669
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL + ++ +I DI++ ++ ++L K + + VT FK +I EGY+PS
Sbjct: 670 EFLNRLDEIIVFRQLTREEVTQIADILIADLAKQLTEKGISVEVTAAFKDLVINEGYDPS 729
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHR 278
YGARPLRRA+ R LED+LA +L+G + GD +D + V + H+
Sbjct: 730 YGARPLRRALTRRLEDSLAVAMLSGKVNSGDHAILDVTAEAVVTVSSHQ 778
>gi|15806066|ref|NP_294770.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Deinococcus
radiodurans R1]
gi|6458777|gb|AAF10620.1|AE001956_1 ATP-dependent Clp protease, ATP-binding subunit ClpB [Deinococcus
radiodurans R1]
Length = 875
Score = 319 bits (817), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 160/271 (59%), Positives = 195/271 (71%), Gaps = 2/271 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G+ DPNRP+ SF+F GP+GVGKTELA ALA F S +AMVRIDMSEYMEKHT
Sbjct: 596 AIRRARAGLNDPNRPLGSFMFLGPSGVGKTELAKALAEFLFDSSDAMVRIDMSEYMEKHT 655
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVGFE GGQLTEAVR RP++VILFDEIEKAH DV NV+LQ+LDDGR+TDG
Sbjct: 656 VARLIGAPPGYVGFEEGGQLTEAVRRRPYAVILFDEIEKAHPDVFNVLLQVLDDGRLTDG 715
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQ--MERGVAEELRRRFRPEFLNRIDEVI 179
+G+TVD +NT+IIMTSNIG +I G D ++ V +ELR FRPEFLNR+D++I
Sbjct: 716 QGRTVDFRNTLIIMTSNIGSPLILEMQQRGEDAETIKSAVMDELRGEFRPEFLNRVDDII 775
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF L L IVDI L + RL + + L +T K KL E GY+P+YGARPLRR I
Sbjct: 776 VFDALTAKDLQSIVDIQLGGLRRRLAERRITLHLTEDAKDKLAELGYDPAYGARPLRRTI 835
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGG 270
+ +E LA IL G IQ G + +D GG
Sbjct: 836 SQYIETPLAREILGGQIQDGSVLNVDYGDGG 866
>gi|260888455|ref|ZP_05899718.1| negative regulator of genetic competence ClpC/MecB [Selenomonas
sputigena ATCC 35185]
gi|330838231|ref|YP_004412811.1| ATPase AAA-2 domain protein [Selenomonas sputigena ATCC 35185]
gi|260861991|gb|EEX76491.1| negative regulator of genetic competence ClpC/MecB [Selenomonas
sputigena ATCC 35185]
gi|329745995|gb|AEB99351.1| ATPase AAA-2 domain protein [Selenomonas sputigena ATCC 35185]
Length = 838
Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 159/272 (58%), Positives = 200/272 (73%), Gaps = 11/272 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SFLF G TGVGKTELA ALA FG++EA+VR DMSEYMEKHT
Sbjct: 533 AVRRARAGLKDPKRPIGSFLFLGSTGVGKTELARALAESLFGTEEAIVRFDMSEYMEKHT 592
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK G+PPGYVG+E GGQLTEAVR P+S+IL DE+EKAH D+ NV+LQ+LDDGR+TD
Sbjct: 593 VSKLVGAPPGYVGYEEGGQLTEAVRRHPYSIILLDEVEKAHPDLFNVLLQVLDDGRLTDA 652
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG--------SDQMERG---VAEELRRRFRPE 170
+G+TVD KNT+IIMTSN G + + + LG D E+G V EE++R FRPE
Sbjct: 653 QGRTVDCKNTVIIMTSNAGADYLKQSTSLGFTAGVQTLGDAYEKGKSRVFEEVKRVFRPE 712
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNR+DE++VFR L K +L +IVDIML+E+ RL K M L V+ K KL+E G + Y
Sbjct: 713 FLNRVDEMLVFRPLGKEELTKIVDIMLREVEARLSEKGMALEVSPAAKSKLVESGTDFKY 772
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSV 262
GARPL+RAI +L+ED +AE +L G GD++
Sbjct: 773 GARPLKRAIRKLVEDEIAERLLKGDFGRGDTI 804
>gi|421858335|ref|ZP_16290606.1| ATPase [Paenibacillus popilliae ATCC 14706]
gi|410832093|dbj|GAC41043.1| ATPase [Paenibacillus popilliae ATCC 14706]
Length = 812
Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 153/286 (53%), Positives = 210/286 (73%), Gaps = 11/286 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RP+ SF+F GPTGVGKTELA ALA FG + A++RIDMSEYMEKH+
Sbjct: 523 AIRRARAGLKDPKRPMGSFIFLGPTGVGKTELARALAESLFGDENAVIRIDMSEYMEKHS 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
++ G+PPGYVG+E GGQLTE VR +P+SV+L DE+EKAH +V N++LQ+L+DGR+TD
Sbjct: 583 TARLVGAPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPEVFNILLQVLEDGRLTDS 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---SDQMERG-------VAEELRRRFRPEF 171
KG+ VD +NT+II+TSN+G I R + LG SD ER V EL++ FRPEF
Sbjct: 643 KGRVVDFRNTLIILTSNVGAEAIKRNTTLGFTSSDNNERDYNNMKDKVMAELKKSFRPEF 702
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNRIDE IVF L + + EIV +M +E+ +RL+ ++++ +T K L +EGY+P+YG
Sbjct: 703 LNRIDETIVFHSLEEKHIAEIVTLMAEELRKRLKEQDVDFQLTDAAKAFLAKEGYDPAYG 762
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRH 277
ARPLRRAI + +ED L+E +L G I+ GDSVT+D + GN+++ R+
Sbjct: 763 ARPLRRAIQKHIEDRLSEELLKGEIEKGDSVTID-EQDGNLVVLRN 807
>gi|8575704|gb|AAF78058.1|AF263561_3 ClpB protease [secondary endosymbiont of Glycaspis brimblecombei]
Length = 857
Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 154/269 (57%), Positives = 201/269 (74%), Gaps = 1/269 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F S +AMVRIDMSE+MEKHT
Sbjct: 583 AIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFLFDSDDAMVRIDMSEFMEKHT 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEA+R RP+SVIL DEIEKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VSRLVGAPPGYVGYEEGGYLTEAIRRRPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA-RESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT++IMTSN+G +I R LG D+M+ V E + R FRPEF+NRIDEV+V
Sbjct: 703 QGRTVDFRNTVVIMTSNLGSDLIQERFGSLGYDEMKELVMEVVSRSFRPEFINRIDEVVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L+K Q+ EI I L +Y+R+E + ++ +T +KL E G++P +GARPL+RAI
Sbjct: 763 FHPLDKEQITEIAQIQLSRLYKRMEEQGYKVKITPAALEKLGEAGFDPVFGARPLKRAIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
+ +E+ LAE +L+G + G VT+D G
Sbjct: 823 QEIENPLAEQMLSGKLVPGKQVTLDIKKG 851
>gi|166365336|ref|YP_001657609.1| ATP-dependent Clp protease ATPase subunit [Microcystis aeruginosa
NIES-843]
gi|166087709|dbj|BAG02417.1| ATP-dependent Clp protease ATPase subunit [Microcystis aeruginosa
NIES-843]
Length = 795
Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 154/289 (53%), Positives = 209/289 (72%), Gaps = 12/289 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARV +++PNRPI+SF+F GPTGVGKTEL ALA FGS+ +M+R+DMSE+ME HT
Sbjct: 490 AIRRARVNLKNPNRPIASFIFAGPTGVGKTELTKALAKLLFGSESSMIRLDMSEFMESHT 549
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK G+PPGY+G+ GGQLTEAVR +P+ V+LFDEIEKAH DV N++LQLL+DG +TD
Sbjct: 550 VSKLIGAPPGYIGYNEGGQLTEAVRRQPYRVVLFDEIEKAHPDVFNLLLQLLEDGHLTDS 609
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-ESILGSD-----------QMERGVAEELRRRFRP 169
+G+ VD KNT+IIMTSNIG VI + + LG + Q+ V EEL++ FRP
Sbjct: 610 QGRRVDFKNTLIIMTSNIGSKVIEKGGNSLGFEIADDFAQSRYQQISNRVTEELKQYFRP 669
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNR+DE+IVFRQL + ++ +I DI++ ++ ++L K + + VT FK +I EGY+PS
Sbjct: 670 EFLNRLDEIIVFRQLTREEVTQIADILIADLAKQLTEKGISVEVTAAFKDLVINEGYDPS 729
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHR 278
YGARPLRRA+ R LED+LA +L+G + GD +D + V + H+
Sbjct: 730 YGARPLRRALTRRLEDSLAVAMLSGKVNSGDHAILDVTAEAVVTVSSHQ 778
>gi|314932748|ref|ZP_07840117.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
caprae C87]
gi|313654429|gb|EFS18182.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
caprae C87]
Length = 817
Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 152/272 (55%), Positives = 203/272 (74%), Gaps = 9/272 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFLNRI 175
TVD +NTIIIMTSN+G + + G + + + + +EL+ FRPEFLNR+
Sbjct: 646 TVDFRNTIIIMTSNVGAQELQDQRFAGFGGASEGNDYETIRKTMMKELKNSFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L+K +L EIV +M+K++ +RL +N+ ++VT K+K+ EEGY+P YGARPL
Sbjct: 706 DDIIVFHKLSKEELKEIVTMMVKKLTDRLSEQNINISVTDKAKEKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RAI + +EDNL+E+IL G G VT+D D
Sbjct: 766 IRAIQKTVEDNLSELILDGNQIEGKEVTIDHD 797
>gi|86156813|ref|YP_463598.1| ATPase AAA [Anaeromyxobacter dehalogenans 2CP-C]
gi|85773324|gb|ABC80161.1| AAA ATPase, ClpA/B [Anaeromyxobacter dehalogenans 2CP-C]
Length = 870
Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 155/286 (54%), Positives = 206/286 (72%), Gaps = 3/286 (1%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DPNRPI SF+F GPTGVGKTE A ALA F + AMVR+DMSEYMEKHT
Sbjct: 584 AVRRARSGLQDPNRPIGSFIFLGPTGVGKTETARALAQFLFDDERAMVRLDMSEYMEKHT 643
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEAVR RP++V+LFDEIEKAH DV NV+LQ+LDDGR+TDG
Sbjct: 644 VSRLIGAPPGYVGYEEGGQLTEAVRRRPYAVVLFDEIEKAHHDVFNVLLQILDDGRLTDG 703
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-ESILGSD--QMERGVAEELRRRFRPEFLNRIDEV 178
+G+TVD +NT+IIMTSNIG + I R G+D Q+ E LR FRPEFLNR+DE+
Sbjct: 704 QGRTVDFRNTVIIMTSNIGSADIQRLAGRPGADMQQIREAALEHLRGEFRPEFLNRVDEI 763
Query: 179 IVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRA 238
+VFR L + + IV+I L + + +E +++ L +T ++ + + GY+P YGARPL+RA
Sbjct: 764 VVFRPLGREDVGRIVEIQLARLRKLVEERHVTLELTEAAREAIADAGYDPVYGARPLKRA 823
Query: 239 IGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMTV 284
I R+++D LA +L G + GD V +D GN+ + ++TV
Sbjct: 824 IQRMVQDPLATRLLQGEFKAGDHVVVDEGKDGNIAFRKGERPAVTV 869
>gi|421837623|ref|ZP_16271749.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum CFSAN001627]
gi|409740189|gb|EKN40560.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum CFSAN001627]
Length = 637
Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 153/277 (55%), Positives = 206/277 (74%), Gaps = 12/277 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++ RARVG++DP RPI SF+F GPTGVGKTEL ALA FG++ M+R+DMSEYMEKH+
Sbjct: 351 SVRRARVGLKDPKRPIGSFIFLGPTGVGKTELTKALAEAMFGNENNMIRVDMSEYMEKHS 410
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ GSPPGYVG + GGQLT+ VR P+SV+LFDEIEKAH +V N++LQ+L+DGR+TDG
Sbjct: 411 VSRLIGSPPGYVGHDEGGQLTDKVRTNPYSVVLFDEIEKAHPEVFNILLQILEDGRLTDG 470
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD------------QMERGVAEELRRRFRP 169
KG+TVD +NTIIIMTSN+G S I+R+ LG + +M+ + EL+ FRP
Sbjct: 471 KGKTVDFRNTIIIMTSNVGASTISRQKTLGFNTSIEEERETEYEKMKDNIMNELKHSFRP 530
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNRID++IVF QL + + EIV +MLK + R++ + ++L T +K L +EGY+ +
Sbjct: 531 EFLNRIDDIIVFHQLREEHIREIVKLMLKTVSNRVKDQGIKLEFTEEAEKILAKEGYDTN 590
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
YGARPLRRAI +++ED L+E IL G I+ GDSV ++
Sbjct: 591 YGARPLRRAITKIVEDKLSEEILKGNIKKGDSVKVNT 627
>gi|172056112|ref|YP_001812572.1| ATPase [Exiguobacterium sibiricum 255-15]
gi|171988633|gb|ACB59555.1| ATPase AAA-2 domain protein [Exiguobacterium sibiricum 255-15]
Length = 815
Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 158/293 (53%), Positives = 203/293 (69%), Gaps = 11/293 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA A+A FG ++A++RIDMSEYMEKH
Sbjct: 523 AIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARAVAEAMFGDEDAIIRIDMSEYMEKHA 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG+E GGQLTE VR +P+SVIL DEIEKAH +V N++LQ+LDDGR+TD
Sbjct: 583 TSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVILLDEIEKAHPEVFNILLQVLDDGRLTDS 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---SDQMER-------GVAEELRRRFRPEF 171
KG+TVD +NTII+MTSN+G S + R +G SD +R V EEL+R FRPEF
Sbjct: 643 KGRTVDFRNTIIVMTSNVGASALKRNKYVGFAVSDDTDREYKDMKGKVMEELKRAFRPEF 702
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNRIDE IVF L K + EIV +M K + +RL + + +T K+ + GY+P YG
Sbjct: 703 LNRIDETIVFHSLEKKHIEEIVKLMAKTLEKRLAEQQVHFELTPAALSKIADIGYDPEYG 762
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMTV 284
ARP+RRA+ R ED L+E +L G IQ G+ V +D + G I+ RH+ T
Sbjct: 763 ARPIRRALQREAEDRLSEALLAGDIQKGERVALDVED-GEFIVRRHQAEPATT 814
>gi|334136731|ref|ZP_08510188.1| negative regulator of genetic competence ClpC/MecB [Paenibacillus
sp. HGF7]
gi|333605752|gb|EGL17109.1| negative regulator of genetic competence ClpC/MecB [Paenibacillus
sp. HGF7]
Length = 815
Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 152/283 (53%), Positives = 205/283 (72%), Gaps = 10/283 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RP+ SF+F GPTGVGKTELA ALA FG + A++RIDMSEYMEKH+
Sbjct: 523 AIRRARAGLKDPKRPMGSFIFLGPTGVGKTELARALAESLFGDENAVIRIDMSEYMEKHS 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ G+PPGYVG+E GGQLTE VR +P+SV+L DEIEKAH +V N++LQ+L+DGR+TD
Sbjct: 583 TSRLVGAPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDS 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
KG+TVD +NT+IIMTSN+G I + S LG + M+ V EL++ FRPEF
Sbjct: 643 KGRTVDFRNTLIIMTSNVGADTIKKNSTLGFTAVQDSGKDYNNMKDKVMNELKKSFRPEF 702
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNRIDE+IVF L++ + EIV +M E+ +RL+ + ++ +T K L +EG++PSYG
Sbjct: 703 LNRIDEIIVFHSLDEKHIAEIVSLMADELRKRLKEQEVDFILTDNAKNFLAKEGFDPSYG 762
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
ARPLRRAI + +ED L+E +L G I GDS+T+D G V++
Sbjct: 763 ARPLRRAIQKHIEDRLSEELLKGSISKGDSLTIDEKDGELVVL 805
>gi|427416269|ref|ZP_18906452.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 7375]
gi|425758982|gb|EKU99834.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 7375]
Length = 817
Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 159/280 (56%), Positives = 206/280 (73%), Gaps = 12/280 (4%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G+++PNRPI+SF+F GPTGVGKTEL ALA +FG++ AMVR+DMSEYME+HT++K GS
Sbjct: 528 GLQNPNRPIASFIFAGPTGVGKTELVKALAISFFGAEAAMVRLDMSEYMERHTIAKLIGS 587
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG GG+LTEAVR +P++VIL DEIEKAH DV N++LQ+LD+G +TD KG+TV+
Sbjct: 588 PPGYVGHGEGGKLTEAVRRKPYTVILLDEIEKAHPDVSNLLLQILDEGHLTDAKGRTVNF 647
Query: 129 KNTIIIMTSNIGDSVIARE-SILG-------SDQMERG----VAEELRRRFRPEFLNRID 176
KNT+++MTSN+G +I + LG +D R V EEL+ FRPEFLNR+D
Sbjct: 648 KNTLLVMTSNVGAKLIQKGVGGLGFNVADNQTDSHYRNLVTLVNEELKEFFRPEFLNRLD 707
Query: 177 EVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLR 236
EVIVFRQL K ++ +I DI+L + RL + + LTVT FK LIE GY+P GARPLR
Sbjct: 708 EVIVFRQLTKDEVKQIADILLCDFQRRLTEQMITLTVTDRFKDYLIESGYSPEQGARPLR 767
Query: 237 RAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYR 276
RAI RLLED+LAE IL+ +Q GD+V +D D +V + R
Sbjct: 768 RAITRLLEDSLAEAILSRQVQAGDAVIIDIDDNNDVQILR 807
>gi|434398107|ref|YP_007132111.1| ATP-dependent chaperone ClpB [Stanieria cyanosphaera PCC 7437]
gi|428269204|gb|AFZ35145.1| ATP-dependent chaperone ClpB [Stanieria cyanosphaera PCC 7437]
Length = 871
Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 156/270 (57%), Positives = 197/270 (72%), Gaps = 6/270 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DP RP +SF+F GPTGVGKTELA ALA F S+EA+VRIDMSEYMEKHT
Sbjct: 589 AIQRSRAGLADPERPTASFIFLGPTGVGKTELAKALAVTLFDSEEALVRIDMSEYMEKHT 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEA+R RP+SVILFDEIEKAH DV N+MLQ+LDDGR+TD
Sbjct: 649 VSRLIGAPPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHNDVFNIMLQILDDGRLTDS 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD----QMERGVAEELRRRFRPEFLNRIDE 177
+G+TVD KNTIIIMTSNIG I + G D +M V + +R FRPEFLNRIDE
Sbjct: 709 QGRTVDFKNTIIIMTSNIGSQYIL--DVAGDDNRYEEMRSRVMDAMRNNFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+F L K QL IV I +K + +RL+ + + L ++ L E GY+P YGARPL+R
Sbjct: 767 IIIFHGLQKAQLRNIVKIQIKRLEDRLDEQKLSLKMSEAALDFLAELGYDPVYGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
AI R LE +A+ IL G + GD++ +D +
Sbjct: 827 AIQRYLETAIAKSILRGEFKGGDTIFVDVE 856
>gi|392374139|ref|YP_003205972.1| chaperone [Candidatus Methylomirabilis oxyfera]
gi|258591832|emb|CBE68133.1| Chaperone [Candidatus Methylomirabilis oxyfera]
Length = 865
Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 155/268 (57%), Positives = 195/268 (72%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DPNRPI SF+F GPTGVGKTELA ALA F + AM+R+DMSEYMEKHT
Sbjct: 591 AIRRARSGLQDPNRPIGSFMFLGPTGVGKTELARALAAFLFDDERAMIRLDMSEYMEKHT 650
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVGFE GGQLTEAVR RP+ V+L DEIEKAH DV N++LQ+LDDGR+TDG
Sbjct: 651 VSRLIGAPPGYVGFEEGGQLTEAVRRRPYCVLLLDEIEKAHTDVFNILLQILDDGRLTDG 710
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVF 181
+G+TVD KNTIIIMTSN+G VI ++M R V E +R FRPEFLNR+DE+++F
Sbjct: 711 QGRTVDFKNTIIIMTSNLGSQVIQELGGRDDEEMRRRVLEAVRTHFRPEFLNRVDEILIF 770
Query: 182 RQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGR 241
L+ Q+ IV+I L+ + +RL + ++L VT K L +EGY+P +GARPLRRAI R
Sbjct: 771 HTLSLAQIKAIVEIQLRRVGKRLVERKLDLEVTDAAKDFLAKEGYDPVFGARPLRRAIQR 830
Query: 242 LLEDNLAEIILTGYIQVGDSVTMDCDSG 269
L D LA +L GD+V +D G
Sbjct: 831 ALLDPLARRLLEHEFAEGDTVRVDAARG 858
>gi|223042918|ref|ZP_03612966.1| ATPase family associated with various cellular activities (AAA)
protein [Staphylococcus capitis SK14]
gi|222443772|gb|EEE49869.1| ATPase family associated with various cellular activities (AAA)
protein [Staphylococcus capitis SK14]
Length = 817
Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 151/272 (55%), Positives = 203/272 (74%), Gaps = 9/272 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFLNRI 175
TVD +NT+IIMTSN+G + + G + + + + +EL+ FRPEFLNR+
Sbjct: 646 TVDFRNTVIIMTSNVGAQELQDQRFAGFGGASEGNDYETIRKTMMKELKNSFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L+K +L EIV +M+K++ +RL +N+ ++VT K+K+ EEGY+P YGARPL
Sbjct: 706 DDIIVFHKLSKEELKEIVTMMVKKLTDRLSEQNINISVTDKAKEKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RAI + +EDNL+E+IL G G VT+D D
Sbjct: 766 IRAIQKTVEDNLSELILDGNQIEGKEVTIDHD 797
>gi|402833447|ref|ZP_10882064.1| negative regulator of genetic competence ClpC/MecB [Selenomonas sp.
CM52]
gi|402280486|gb|EJU29193.1| negative regulator of genetic competence ClpC/MecB [Selenomonas sp.
CM52]
Length = 839
Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 159/272 (58%), Positives = 199/272 (73%), Gaps = 11/272 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SFLF G TGVGKTELA ALA FG+ EA+VR DMSEYMEKHT
Sbjct: 534 AVRRARAGLKDPKRPIGSFLFLGSTGVGKTELARALAESLFGTDEAIVRFDMSEYMEKHT 593
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK G+PPGYVG+E GGQLTEAVR P+S+IL DE+EKAH D+ NV+LQ+LDDGR+TD
Sbjct: 594 VSKLVGAPPGYVGYEEGGQLTEAVRRHPYSIILLDEVEKAHPDLFNVLLQVLDDGRLTDA 653
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG--------SDQMERG---VAEELRRRFRPE 170
+G+TVD KNT+IIMTSN G + + + LG D E+G V EE++R FRPE
Sbjct: 654 QGRTVDCKNTVIIMTSNAGADYLKQSTSLGFTAGVQTLGDAYEKGKSRVFEEVKRVFRPE 713
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNR+DE++VFR L K +L +IVDIML+E+ RL K M L V+ K KL+E G + Y
Sbjct: 714 FLNRVDEMLVFRPLGKEELTKIVDIMLREVEARLSEKGMALEVSPAAKSKLVENGTDFKY 773
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSV 262
GARPL+RAI +L+ED +AE +L G GD++
Sbjct: 774 GARPLKRAIRKLVEDEIAERLLKGDFGRGDTI 805
>gi|417907371|ref|ZP_12551144.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
capitis VCU116]
gi|341596264|gb|EGS38880.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
capitis VCU116]
Length = 817
Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 151/272 (55%), Positives = 203/272 (74%), Gaps = 9/272 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFLNRI 175
TVD +NT+IIMTSN+G + + G + + + + +EL+ FRPEFLNR+
Sbjct: 646 TVDFRNTVIIMTSNVGAQELQDQRFAGFGGASEGNDYETIRKTMMKELKNSFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L+K +L EIV +M+K++ +RL +N+ ++VT K+K+ EEGY+P YGARPL
Sbjct: 706 DDIIVFHKLSKEELKEIVTMMVKKLTDRLSEQNINISVTDKAKEKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RAI + +EDNL+E+IL G G VT+D D
Sbjct: 766 IRAIQKTVEDNLSELILDGNQIEGKEVTIDHD 797
>gi|302390639|ref|YP_003826460.1| ATPase AAA [Thermosediminibacter oceani DSM 16646]
gi|302201267|gb|ADL08837.1| ATPase AAA-2 domain protein [Thermosediminibacter oceani DSM 16646]
Length = 814
Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 150/268 (55%), Positives = 203/268 (75%), Gaps = 10/268 (3%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RP+ SF+F GPTGVGKTELA ALA FG ++AM+R+DMSEYMEK VS+ G+
Sbjct: 528 GLKDPRRPVGSFIFLGPTGVGKTELARALAEAMFGDEDAMIRLDMSEYMEKFAVSRMIGA 587
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG+E GG+LTE VR +P+SVILFDEIEKAH DV N++LQ+L+DGR+TD +G+TVD
Sbjct: 588 PPGYVGYEEGGELTEKVRRKPYSVILFDEIEKAHPDVFNILLQILEDGRLTDAQGRTVDF 647
Query: 129 KNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEFLNRIDEV 178
KNT+IIMTSN+G ++I R LG +M+ V EELRR FRPEF+NR+DE+
Sbjct: 648 KNTVIIMTSNVGANLIQRARTLGFTPRDEETKNYSEMKDRVLEELRRTFRPEFINRVDEI 707
Query: 179 IVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRA 238
IVF LN+ + +IVD+MLK++ ERL+ ++ + V+ K+ L+++G++P YGARPLRR
Sbjct: 708 IVFHPLNEEHMKKIVDLMLKQVNERLKENDISIEVSDRAKEWLVKKGFDPMYGARPLRRV 767
Query: 239 IGRLLEDNLAEIILTGYIQVGDSVTMDC 266
I + +EDNL+E IL G + GD+V +D
Sbjct: 768 IQKEVEDNLSEEILKGNVSQGDTVLVDV 795
>gi|220915533|ref|YP_002490837.1| ATP-dependent chaperone ClpB [Anaeromyxobacter dehalogenans 2CP-1]
gi|219953387|gb|ACL63771.1| ATP-dependent chaperone ClpB [Anaeromyxobacter dehalogenans 2CP-1]
Length = 870
Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 155/286 (54%), Positives = 205/286 (71%), Gaps = 3/286 (1%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DPNRPI SF+F GPTGVGKTE A ALA F + AMVR+DMSEYMEKHT
Sbjct: 584 AVRRARSGLQDPNRPIGSFIFLGPTGVGKTETARALAQFLFDDERAMVRLDMSEYMEKHT 643
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEAVR RP++V+LFDEIEKAH DV NV+LQ+LDDGR+TDG
Sbjct: 644 VSRLIGAPPGYVGYEEGGQLTEAVRRRPYAVVLFDEIEKAHHDVFNVLLQILDDGRLTDG 703
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-ESILGSD--QMERGVAEELRRRFRPEFLNRIDEV 178
+G+TVD +NT+IIMTSNIG + I R G+D Q+ E LR FRPEFLNR+DE+
Sbjct: 704 QGRTVDFRNTVIIMTSNIGSADIQRLAGRPGADMQQIREAALEHLRGEFRPEFLNRVDEI 763
Query: 179 IVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRA 238
+VFR L + + IV+I L + + +E +++ L +T ++ + + GY+P YGARPL+RA
Sbjct: 764 VVFRPLGREDVGRIVEIQLGRLRKLIEERHVSLELTEAAREAIADAGYDPVYGARPLKRA 823
Query: 239 IGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMTV 284
I R+++D LA +L G + GD V +D GN+ + +TV
Sbjct: 824 IQRMVQDPLATRLLQGEFKAGDHVVVDEGKDGNIAFRKGERPEVTV 869
>gi|148381451|ref|YP_001255992.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum A str. ATCC 3502]
gi|153932782|ref|YP_001385826.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum A str. ATCC 19397]
gi|153936468|ref|YP_001389233.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum A str. Hall]
gi|387819793|ref|YP_005680140.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Clostridium
botulinum H04402 065]
gi|148290935|emb|CAL85071.1| negative regulator of genetic competence [Clostridium botulinum A
str. ATCC 3502]
gi|152928826|gb|ABS34326.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium botulinum A str. ATCC 19397]
gi|152932382|gb|ABS37881.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium botulinum A str. Hall]
gi|322807837|emb|CBZ05412.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Clostridium
botulinum H04402 065]
Length = 811
Score = 318 bits (814), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 153/277 (55%), Positives = 206/277 (74%), Gaps = 12/277 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++ RARVG++DP RPI SF+F GPTGVGKTEL ALA FG++ M+R+DMSEYMEKH+
Sbjct: 525 SVRRARVGLKDPKRPIGSFIFLGPTGVGKTELTKALAEAMFGNENNMIRVDMSEYMEKHS 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ GSPPGYVG + GGQLT+ VR P+SV+LFDEIEKAH +V N++LQ+L+DGR+TDG
Sbjct: 585 VSRLIGSPPGYVGHDEGGQLTDKVRTNPYSVVLFDEIEKAHPEVFNILLQILEDGRLTDG 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD------------QMERGVAEELRRRFRP 169
KG+TVD +NTIIIMTSN+G S I+R+ LG + +M+ + EL+ FRP
Sbjct: 645 KGKTVDFRNTIIIMTSNVGASTISRQKTLGFNTSIEEERETEYEKMKDNIMNELKHSFRP 704
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNRID++IVF QL + + EIV +MLK + R++ + ++L T +K L +EGY+ +
Sbjct: 705 EFLNRIDDIIVFHQLREEHIREIVKLMLKTVSNRVKDQGIKLEFTEEAEKILAKEGYDTN 764
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
YGARPLRRAI +++ED L+E IL G I+ GDSV ++
Sbjct: 765 YGARPLRRAITKIVEDKLSEEILKGNIKKGDSVKVNT 801
>gi|333980531|ref|YP_004518476.1| ATPase AAA [Desulfotomaculum kuznetsovii DSM 6115]
gi|333824012|gb|AEG16675.1| ATPase AAA-2 domain protein [Desulfotomaculum kuznetsovii DSM 6115]
Length = 828
Score = 318 bits (814), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 153/282 (54%), Positives = 206/282 (73%), Gaps = 10/282 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++ RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++A+VR+DMSEYME+
Sbjct: 528 SVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEALFGDEDALVRLDMSEYMERFA 587
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEAVR +P++V+L DEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 588 VSRLVGAPPGYVGYEEGGQLTEAVRRKPYTVVLLDEIEKAHPDVFNILLQVLEDGRLTDA 647
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
KG+TVD +NT+IIMTSN+G + +E LG ++M+ V EEL+R FRPEF
Sbjct: 648 KGRTVDFRNTVIIMTSNVGVHTLRKEGTLGFRTEQEREASYERMKERVTEELKRTFRPEF 707
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNRIDE+IVF L + +IV +MLKE+ R++ ++E+ T ++ L EG++ +YG
Sbjct: 708 LNRIDEIIVFHSLTAEHIKKIVGLMLKEVAGRMKEHDVEVEFTEAAREILAREGFDETYG 767
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
ARPLRRAI RL+ED L+E +L G Q GD V +D + G V+
Sbjct: 768 ARPLRRAIQRLVEDRLSEELLKGTFQRGDRVVVDGEDGRIVV 809
>gi|170757820|ref|YP_001783151.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum B1 str. Okra]
gi|429246823|ref|ZP_19210119.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum CFSAN001628]
gi|169123032|gb|ACA46868.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium botulinum B1 str. Okra]
gi|428756157|gb|EKX78733.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum CFSAN001628]
Length = 811
Score = 318 bits (814), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 153/277 (55%), Positives = 206/277 (74%), Gaps = 12/277 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++ RARVG++DP RPI SF+F GPTGVGKTEL ALA FG++ M+R+DMSEYMEKH+
Sbjct: 525 SVRRARVGLKDPKRPIGSFIFLGPTGVGKTELTKALAEAMFGNENNMIRVDMSEYMEKHS 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ GSPPGYVG + GGQLT+ VR P+SV+LFDEIEKAH +V N++LQ+L+DGR+TDG
Sbjct: 585 VSRLIGSPPGYVGHDEGGQLTDKVRTNPYSVVLFDEIEKAHPEVFNILLQILEDGRLTDG 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD------------QMERGVAEELRRRFRP 169
KG+TVD +NTIIIMTSN+G S I+R+ LG + +M+ + EL+ FRP
Sbjct: 645 KGKTVDFRNTIIIMTSNVGASTISRQKTLGFNTSIEEERETEYEKMKDNIMNELKHSFRP 704
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNRID++IVF QL + + EIV +MLK + R++ + ++L T +K L +EGY+ +
Sbjct: 705 EFLNRIDDIIVFHQLREEHIREIVKLMLKTVSNRVKDQGIKLEFTEEAEKILAKEGYDTN 764
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
YGARPLRRAI +++ED L+E IL G I+ GDSV ++
Sbjct: 765 YGARPLRRAITKIVEDKLSEEILKGNIKKGDSVKVNT 801
>gi|168178801|ref|ZP_02613465.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum NCTC 2916]
gi|182670016|gb|EDT81992.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum NCTC 2916]
Length = 811
Score = 318 bits (814), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 153/277 (55%), Positives = 206/277 (74%), Gaps = 12/277 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++ RARVG++DP RPI SF+F GPTGVGKTEL ALA FG++ M+R+DMSEYMEKH+
Sbjct: 525 SVRRARVGLKDPKRPIGSFIFLGPTGVGKTELTKALAEAMFGNENNMIRVDMSEYMEKHS 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ GSPPGYVG + GGQLT+ VR P+SV+LFDEIEKAH +V N++LQ+L+DGR+TDG
Sbjct: 585 VSRLIGSPPGYVGHDEGGQLTDKVRTNPYSVVLFDEIEKAHPEVFNILLQILEDGRLTDG 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD------------QMERGVAEELRRRFRP 169
KG+TVD +NTIIIMTSN+G S I+R+ LG + +M+ + EL+ FRP
Sbjct: 645 KGKTVDFRNTIIIMTSNVGASTISRQKTLGFNTSIEEERETEYEKMKDNIMNELKHSFRP 704
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNRID++IVF QL + + EIV +MLK + R++ + ++L T +K L +EGY+ +
Sbjct: 705 EFLNRIDDIIVFHQLREEHIREIVKLMLKTVSNRVKDQGIKLEFTEEAEKILAKEGYDTN 764
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
YGARPLRRAI +++ED L+E IL G I+ GDSV ++
Sbjct: 765 YGARPLRRAITKIVEDKLSEEILKGNIKKGDSVKVNT 801
>gi|226950963|ref|YP_002806054.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum A2 str. Kyoto]
gi|226843529|gb|ACO86195.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum A2 str. Kyoto]
Length = 811
Score = 318 bits (814), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 153/277 (55%), Positives = 206/277 (74%), Gaps = 12/277 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++ RARVG++DP RPI SF+F GPTGVGKTEL ALA FG++ M+R+DMSEYMEKH+
Sbjct: 525 SVRRARVGLKDPKRPIGSFIFLGPTGVGKTELTKALAEAMFGNENNMIRVDMSEYMEKHS 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ GSPPGYVG + GGQLT+ VR P+SV+LFDEIEKAH +V N++LQ+L+DGR+TDG
Sbjct: 585 VSRLIGSPPGYVGHDEGGQLTDKVRTNPYSVVLFDEIEKAHPEVFNILLQILEDGRLTDG 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD------------QMERGVAEELRRRFRP 169
KG+TVD +NTIIIMTSN+G S I+R+ LG + +M+ + EL+ FRP
Sbjct: 645 KGKTVDFRNTIIIMTSNVGASTISRQKTLGFNTSIEEERETEYEKMKDNIMNELKHSFRP 704
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNRID++IVF QL + + EIV +MLK + R++ + ++L T +K L +EGY+ +
Sbjct: 705 EFLNRIDDIIVFHQLREEHIREIVKLMLKTVSNRVKDQGIKLEFTEEAEKILAKEGYDTN 764
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
YGARPLRRAI +++ED L+E IL G I+ GDSV ++
Sbjct: 765 YGARPLRRAITKIVEDKLSEEILKGNIKKGDSVKVNT 801
>gi|299821023|ref|ZP_07052911.1| ATPase with chaperone activity, ATP-binding subunit [Listeria grayi
DSM 20601]
gi|299816688|gb|EFI83924.1| ATPase with chaperone activity, ATP-binding subunit [Listeria grayi
DSM 20601]
Length = 821
Score = 318 bits (814), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 152/278 (54%), Positives = 204/278 (73%), Gaps = 9/278 (3%)
Query: 1 MTLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKH 60
+ + RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +EAM+RIDMSEYMEK
Sbjct: 521 LAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDEEAMIRIDMSEYMEKF 580
Query: 61 TVSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTD 120
+ ++ GSPPGYVG+E GGQLTE VR +P+SVIL DEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 581 STARLVGSPPGYVGYEEGGQLTEKVRQKPYSVILLDEIEKAHPDVFNMLLQVLDDGRLTD 640
Query: 121 GKGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEF 171
KG+ VD +NT+IIMTSN+G + ++ +G ME+ V +EL++ FRPEF
Sbjct: 641 SKGRVVDFRNTVIIMTSNVGAREMQQDKSVGFLVTDPRKDHKAMEQRVLQELKQVFRPEF 700
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
+NRIDE IVF L +L EIV ++ K++ +RL A+++ +T+T K K+ ++GY+P YG
Sbjct: 701 INRIDETIVFHALQDKELKEIVTLLTKQLTKRLAAQDIHVTLTEGAKAKIAKDGYDPEYG 760
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
ARPL+RAI R +ED L+E +L G I VGD+V + +G
Sbjct: 761 ARPLKRAIQRNIEDRLSEELLRGKIVVGDAVEIGVKAG 798
>gi|410454418|ref|ZP_11308357.1| Class III stress response-related ATPase, ClpC [Bacillus
bataviensis LMG 21833]
gi|409932233|gb|EKN69200.1| Class III stress response-related ATPase, ClpC [Bacillus
bataviensis LMG 21833]
Length = 813
Score = 318 bits (814), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 151/274 (55%), Positives = 202/274 (73%), Gaps = 9/274 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+RIDMSEYMEKH+ S+
Sbjct: 526 RARAGLKDPKRPIGSFVFLGPTGVGKTELARALAEAMFGDEDAMIRIDMSEYMEKHSTSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPGYVG+E GGQLTE VR +P+SVIL DEIEKAH DV N++LQ+L+DGR+TD KG+
Sbjct: 586 LVGSPPGYVGYEEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDGRLTDSKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSD---------QMERGVAEELRRRFRPEFLNRI 175
TVD +NT++IMTSN+G + R +G + M+ V EEL++ FRPEFLNRI
Sbjct: 646 TVDFRNTVLIMTSNVGAEQLKRNKYVGFNIQDGQQDYKDMKGKVMEELKKAFRPEFLNRI 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
DE+IVF L + L EIV ++ +++ +RL+ +++ L +T K+K+ +EGY+P YGARPL
Sbjct: 706 DEIIVFHALERKHLNEIVTLLSEQLIKRLKEQDISLELTDAAKEKISQEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
RRAI + +ED L+E +L G + G +V +D G
Sbjct: 766 RRAIQKHIEDRLSEELLKGTLLTGQNVIIDVAQG 799
>gi|374320677|ref|YP_005073806.1| Negative regulator of genetic competence clpC/mecB [Paenibacillus
terrae HPL-003]
gi|357199686|gb|AET57583.1| Negative regulator of genetic competence clpC/mecB [Paenibacillus
terrae HPL-003]
Length = 814
Score = 318 bits (814), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 153/279 (54%), Positives = 203/279 (72%), Gaps = 10/279 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FG + A++RIDMSEYMEKH+
Sbjct: 523 AIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDENAVIRIDMSEYMEKHS 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ G+PPGYVG+E GGQLTE VR +P+SV+L DEIEKAH +V N++LQ+L+DGR+TD
Sbjct: 583 TSRLVGAPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDS 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
KG+ VD +NT+II+TSN+G VI R S LG D M+ V EEL++ FRPEF
Sbjct: 643 KGRVVDFRNTLIILTSNVGAQVIKRNSTLGFTAVVDAGADYDNMKGKVMEELKKSFRPEF 702
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNRIDE+IVF L + + EIV +M +E+ +RL ++ +T K L +EG++P+YG
Sbjct: 703 LNRIDEIIVFHSLEEKHIAEIVSLMSEELRKRLNEYEVDFELTDKAKAFLAKEGFDPAYG 762
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGG 270
ARPLRRAI + +ED L+E +LTG I GDS+ +D ++G
Sbjct: 763 ARPLRRAIQKHIEDRLSEELLTGNITKGDSLFIDEENGA 801
>gi|333373136|ref|ZP_08465052.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Desmospora sp.
8437]
gi|332970715|gb|EGK09695.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Desmospora sp.
8437]
Length = 814
Score = 318 bits (814), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 150/278 (53%), Positives = 205/278 (73%), Gaps = 10/278 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +EA++RIDMSEYMEKH+
Sbjct: 523 AIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEAMFGDEEAIIRIDMSEYMEKHS 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ G+PPGYVG++ GGQLTE VR +P+SV+LFDE+EKAH +V NVMLQ+L+DGR+TDG
Sbjct: 583 TSRLVGAPPGYVGYDEGGQLTEKVRRKPYSVVLFDEVEKAHPEVFNVMLQVLEDGRLTDG 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
KG+TVD +NT+IIMTSN+G ++I + LG + M+ V EEL++ FRPEF
Sbjct: 643 KGRTVDFRNTVIIMTSNVGANLIKQNKRLGFAVGDSAQDEYEAMKENVMEELKKTFRPEF 702
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNRID+VIVF L + L +IV +M ++ +RL+ + ++ +T K L + G++P+YG
Sbjct: 703 LNRIDDVIVFHSLKEEHLQQIVSLMSNQLRKRLQEQEIDFVLTDAASKYLAKAGFDPTYG 762
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
ARPLRRAI + +ED L+E +L G I+ GD++ +D G
Sbjct: 763 ARPLRRAIQKHIEDRLSEELLKGSIKRGDTLEIDEKDG 800
>gi|170760517|ref|YP_001788851.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum A3 str. Loch Maree]
gi|169407506|gb|ACA55917.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium botulinum A3 str. Loch Maree]
Length = 811
Score = 318 bits (814), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 153/277 (55%), Positives = 206/277 (74%), Gaps = 12/277 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++ RARVG++DP RPI SF+F GPTGVGKTEL ALA FG++ M+R+DMSEYMEKH+
Sbjct: 525 SVRRARVGLKDPKRPIGSFIFLGPTGVGKTELTKALAEAMFGNENNMIRVDMSEYMEKHS 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ GSPPGYVG + GGQLT+ VR P+SV+LFDEIEKAH +V N++LQ+L+DGR+TDG
Sbjct: 585 VSRLIGSPPGYVGHDEGGQLTDKVRTNPYSVVLFDEIEKAHPEVFNILLQILEDGRLTDG 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD------------QMERGVAEELRRRFRP 169
KG+TVD +NTIIIMTSN+G S I+R+ LG + +M+ + EL+ FRP
Sbjct: 645 KGKTVDFRNTIIIMTSNVGASTISRQKTLGFNTSIEEERETEYEKMKDNIMNELKHSFRP 704
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNRID++IVF QL + + EIV +MLK + R++ + ++L T +K L +EGY+ +
Sbjct: 705 EFLNRIDDIIVFHQLREEHIREIVKLMLKTVSNRVKDQGIKLEFTEEAEKILAKEGYDTN 764
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
YGARPLRRAI +++ED L+E IL G I+ GDSV ++
Sbjct: 765 YGARPLRRAITKIVEDKLSEEILKGNIKKGDSVKVNT 801
>gi|337288558|ref|YP_004628030.1| ATP-dependent chaperone ClpB [Thermodesulfobacterium sp. OPB45]
gi|334902296|gb|AEH23102.1| ATP-dependent chaperone ClpB [Thermodesulfobacterium geofontis
OPF15]
Length = 872
Score = 318 bits (814), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 157/269 (58%), Positives = 199/269 (73%), Gaps = 1/269 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
L RAR G++DP RPI SFLF GPTGVGKTELA ALA F +++AM+RIDM+EYMEKH+
Sbjct: 586 ALRRARAGLKDPRRPIGSFLFIGPTGVGKTELAKALAEFMFDTEDAMIRIDMTEYMEKHS 645
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEAVR RP+SVILFDEIEKAH DV N++LQ+LDDGR+TDG
Sbjct: 646 VSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDG 705
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVF 181
KG+TVD KNTIIIMTSN+G S ++ L ++E V E L+ FRPEFLNRIDE+IVF
Sbjct: 706 KGRTVDFKNTIIIMTSNVG-SFYFQDLSLSRKEVENRVFELLKSTFRPEFLNRIDEIIVF 764
Query: 182 RQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGR 241
L + +++IVDI ++ + ERL K M L +T K+ L GY+P +GARPL+R I +
Sbjct: 765 NNLTREDIIKIVDIQIRYLNERLSEKGMFLELTDKAKELLATYGYDPVFGARPLKRTIQK 824
Query: 242 LLEDNLAEIILTGYIQVGDSVTMDCDSGG 270
+E+ LA IL G GD + +D + G
Sbjct: 825 YIENALALKILEGVFSEGDKIIVDVNEAG 853
>gi|312282443|dbj|BAJ34087.1| unnamed protein product [Thellungiella halophila]
Length = 950
Score = 318 bits (814), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 151/283 (53%), Positives = 205/283 (72%), Gaps = 13/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+RVG++DP+RPI++ LF GPTGVGKTEL ALA YFGS+E+M+R+DMSEYME+HT
Sbjct: 647 AVKRSRVGLKDPDRPIAAMLFCGPTGVGKTELTKALAANYFGSEESMLRLDMSEYMERHT 706
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGFE GG LTEA+R RP +V+LFDEIEKAH D+ N++LQL +DG +TD
Sbjct: 707 VSKLIGSPPGYVGFEEGGMLTEAIRRRPFTVVLFDEIEKAHPDIFNILLQLFEDGHLTDS 766
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARES------ILGSDQ-------MERGVAEELRRRFR 168
+G+ V KN +IIMTSN+G S IA+ IL D+ M+ V EEL+ FR
Sbjct: 767 QGRRVSFKNALIIMTSNVGSSAIAKGRHGSIGFILDDDEEAASYTGMKALVVEELKNYFR 826
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PE LNRIDE+++FRQL K Q+MEI+++ML+++ RL A + L V+ K+ + +GY+P
Sbjct: 827 PELLNRIDEIVIFRQLEKAQMMEILNLMLQDLKSRLVALGVGLEVSEPVKELICRQGYDP 886
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGN 271
+YGARPLRR + ++E+ L+E L G + GD+ + D GN
Sbjct: 887 AYGARPLRRTLTEIVENPLSEAFLAGTFKPGDTAFVVLDDTGN 929
>gi|18423233|ref|NP_568750.1| ERD1 protein [Arabidopsis thaliana]
gi|1169544|sp|P42762.1|CLPD_ARATH RecName: Full=Chaperone protein ClpD, chloroplastic; AltName:
Full=ATP-dependent Clp protease ATP-binding subunit ClpD
homolog; AltName: Full=Casein lytic proteinase D;
AltName: Full=ERD1 protein; AltName: Full=Protein EARLY
RESPONSIVE TO DEHYDRATION 1; AltName: Full=Protein
SENESCENCE ASSOCIATED GENE 15; Flags: Precursor
gi|497629|dbj|BAA04506.1| ERD1 protein [Arabidopsis thaliana]
gi|10177198|dbj|BAB10330.1| Erd1 protein precursor [Arabidopsis thaliana]
gi|14334878|gb|AAK59617.1| putative ATP-dependent Clp protease ATP-binding subunit ClpD, ERD1
protein precursor [Arabidopsis thaliana]
gi|22136916|gb|AAM91802.1| putative ATP-dependent Clp protease ATP-binding subunit ClpD, ERD1
protein precursor [Arabidopsis thaliana]
gi|332008646|gb|AED96029.1| ERD1 protein [Arabidopsis thaliana]
Length = 945
Score = 317 bits (813), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 151/283 (53%), Positives = 205/283 (72%), Gaps = 13/283 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+RVG++DP+RPI++ LF GPTGVGKTEL ALA YFGS+E+M+R+DMSEYME+HT
Sbjct: 642 AVKRSRVGLKDPDRPIAAMLFCGPTGVGKTELTKALAANYFGSEESMLRLDMSEYMERHT 701
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGFE GG LTEA+R RP +V+LFDEIEKAH D+ N++LQL +DG +TD
Sbjct: 702 VSKLIGSPPGYVGFEEGGMLTEAIRRRPFTVVLFDEIEKAHPDIFNILLQLFEDGHLTDS 761
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARES------ILGSDQ-------MERGVAEELRRRFR 168
+G+ V KN +IIMTSN+G IA+ IL D+ M+ V EEL+ FR
Sbjct: 762 QGRRVSFKNALIIMTSNVGSLAIAKGRHGSIGFILDDDEEAASYTGMKALVVEELKNYFR 821
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PE LNRIDE+++FRQL K Q+MEI+++ML+++ RL A + L V+ K+ + ++GY+P
Sbjct: 822 PELLNRIDEIVIFRQLEKAQMMEILNLMLQDLKSRLVALGVGLEVSEPVKELICKQGYDP 881
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGN 271
+YGARPLRR + ++ED L+E L G + GD+ + D GN
Sbjct: 882 AYGARPLRRTVTEIVEDPLSEAFLAGSFKPGDTAFVVLDDTGN 924
>gi|291538077|emb|CBL11188.1| ATPases with chaperone activity, ATP-binding subunit [Roseburia
intestinalis XB6B4]
Length = 815
Score = 317 bits (813), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 156/267 (58%), Positives = 195/267 (73%), Gaps = 11/267 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R RVG++DP RPI SFLF GPTGVGKTE++ ALA FGS+++M+R+DMSEYMEKH+
Sbjct: 530 AVRRGRVGLKDPKRPIGSFLFLGPTGVGKTEISKALAEAVFGSEQSMIRVDMSEYMEKHS 589
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG E GGQL+E VR P+SVILFDEIEKAH DV N++LQ+LDDG +TD
Sbjct: 590 VSKMIGSPPGYVGHEEGGQLSEKVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDS 649
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
+G+ VD KNTIIIMTSN G I LG D+M+ V EE+RR F+PEF
Sbjct: 650 QGRKVDFKNTIIIMTSNAGAQAIIEPKKLGFAVSDDEKQNYDRMKNSVMEEVRRIFKPEF 709
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAK-NMELTVTHTFKKKLIEEGYNPSY 230
LNRIDE IVFR LNK + +IV +MLKE+ +R E + + LTV + KK ++E+ Y+P Y
Sbjct: 710 LNRIDETIVFRALNKDDMKQIVALMLKELTDRCEKQMGIHLTVRDSVKKHIVEKAYDPKY 769
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQ 257
GARPLRR I +ED LAE IL+G ++
Sbjct: 770 GARPLRRQIQNDIEDELAEEILSGKVK 796
>gi|333896156|ref|YP_004470030.1| ATPase AAA [Thermoanaerobacterium xylanolyticum LX-11]
gi|333111421|gb|AEF16358.1| ATPase AAA-2 domain protein [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 810
Score = 317 bits (813), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 149/272 (54%), Positives = 205/272 (75%), Gaps = 11/272 (4%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTGVGKTEL+ ALA FG + A+VRIDMSEYMEK +VS+ GS
Sbjct: 532 GLKDPKRPIGSFIFLGPTGVGKTELSKALAEAMFGDESAIVRIDMSEYMEKFSVSRLIGS 591
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG+E GG+LTE +R +P+SVILFDEIEKAH DV N++LQ+LDDGR+TD KG+TVD
Sbjct: 592 PPGYVGYEEGGELTEKIRRKPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSKGRTVDF 651
Query: 129 KNTIIIMTSNIGDSVIARESILG-----------SDQMERGVAEELRRRFRPEFLNRIDE 177
KNT+IIMTSN+G +I +++ LG ++M+ + EEL++ FRPEFLNRID+
Sbjct: 652 KNTLIIMTSNVGAQLIKKQTTLGFMPESNAEKESYEKMKENILEELKKSFRPEFLNRIDD 711
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+IVFRQL + + +I D+M+ ++ +RL+ N+ L T K++L++EGY+ +YGARPLRR
Sbjct: 712 IIVFRQLTQDDIRKITDLMIADLNKRLKDNNISLEFTDDAKEELLKEGYDVTYGARPLRR 771
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
AI +++E L+E++L G I+ GD V + G
Sbjct: 772 AIQKVVESELSELMLKGEIKSGDKVLVKLKDG 803
>gi|374603227|ref|ZP_09676209.1| Negative regulator of genetic competence clpC/mecB [Paenibacillus
dendritiformis C454]
gi|374391096|gb|EHQ62436.1| Negative regulator of genetic competence clpC/mecB [Paenibacillus
dendritiformis C454]
Length = 812
Score = 317 bits (813), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 150/283 (53%), Positives = 206/283 (72%), Gaps = 10/283 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RP+ SF+F GPTGVGKTELA ALA FG + A++RIDMSEYMEKH+
Sbjct: 523 AIRRARAGLKDPKRPMGSFIFLGPTGVGKTELARALAESLFGDENAVIRIDMSEYMEKHS 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
++ G+PPGYVG+E GGQLTE VR +P+SV+L DEIEKAH +V N++LQ+L+DGR+TD
Sbjct: 583 TARLVGAPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDS 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
KG+ VD +NT+II+TSN+G I R + LG + M+ V EL++ FRPEF
Sbjct: 643 KGRVVDFRNTLIILTSNVGAEAIKRNTTLGFTSPDNNERDYNNMKDKVMAELKKSFRPEF 702
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNRIDE+IVF L + + EIV +M +E+ +RL+ ++++ +T K L +EGY+P+YG
Sbjct: 703 LNRIDEIIVFHSLEEKHIAEIVTLMAEELRKRLKEQDVDFQLTDAAKAFLAKEGYDPAYG 762
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
ARPLRRAI + +ED L+E +L G I+ GDSVT+D G V++
Sbjct: 763 ARPLRRAIQKHIEDRLSEELLKGDIEKGDSVTIDEQDGSLVVL 805
>gi|153940994|ref|YP_001392864.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum F str. Langeland]
gi|384463825|ref|YP_005676420.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum F str. 230613]
gi|152936890|gb|ABS42388.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum F str. Langeland]
gi|295320842|gb|ADG01220.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum F str. 230613]
Length = 811
Score = 317 bits (813), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 152/277 (54%), Positives = 206/277 (74%), Gaps = 12/277 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++ RARVG++DP RPI SF+F GPTGVGKTEL ALA FG++ M+R+DMSEYMEKH+
Sbjct: 525 SVRRARVGLKDPKRPIGSFIFLGPTGVGKTELTKALAEAMFGNENNMIRVDMSEYMEKHS 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ GSPPGY+G + GGQLT+ VR P+SV+LFDEIEKAH +V N++LQ+L+DGR+TDG
Sbjct: 585 VSRLIGSPPGYIGHDEGGQLTDKVRTNPYSVVLFDEIEKAHPEVFNILLQILEDGRLTDG 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD------------QMERGVAEELRRRFRP 169
KG+TVD +NTIIIMTSN+G S I+R+ LG + +M+ + EL+ FRP
Sbjct: 645 KGKTVDFRNTIIIMTSNVGASTISRQKTLGFNTSIEEERETEYEKMKDNIMNELKHSFRP 704
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
EFLNRID++IVF QL + + EIV +MLK + R++ + ++L T +K L +EGY+ +
Sbjct: 705 EFLNRIDDIIVFHQLREEHIREIVKLMLKTVSNRVKDQGIKLEFTEEAEKILAKEGYDTN 764
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
YGARPLRRAI +++ED L+E IL G I+ GDSV ++
Sbjct: 765 YGARPLRRAITKIVEDKLSEEILKGNIKKGDSVKVNT 801
>gi|302819816|ref|XP_002991577.1| hypothetical protein SELMODRAFT_186186 [Selaginella moellendorffii]
gi|300140610|gb|EFJ07331.1| hypothetical protein SELMODRAFT_186186 [Selaginella moellendorffii]
Length = 864
Score = 317 bits (813), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 151/288 (52%), Positives = 206/288 (71%), Gaps = 12/288 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG++DP+RPI++ LF GPTGVGKTEL ALA +FG+++AM+R+DMSEYME+HT
Sbjct: 554 AVRRARVGLKDPSRPIAAMLFCGPTGVGKTELTKALAQHFFGAEDAMIRLDMSEYMERHT 613
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GG LTEAVR RP +VIL DEIEKAH D+ N++LQ+ +DGR+TD
Sbjct: 614 VSKLIGSPPGYVGYGEGGTLTEAVRKRPFTVILLDEIEKAHPDIFNMLLQIFEDGRLTDS 673
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR--ESILGSDQMERG----------VAEELRRRFRP 169
+G+ V +N+++IMTSN+G S IAR +G E G V +EL+ FRP
Sbjct: 674 QGRVVSFRNSLLIMTSNVGSSAIARGGSGKIGFSFAEGGDEDYTNLKGLVMDELKNFFRP 733
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
E LNRIDEV+VFR L K Q+ IVD+ML E ERL + + L V+ K + +EGY+ +
Sbjct: 734 ELLNRIDEVVVFRSLEKAQVRAIVDMMLAETKERLAKRGINLEVSEAAVKLVCDEGYDKA 793
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRH 277
YGARPLRRA+ R++ED ++E +L+ + GD+ +D D+ GN ++ +H
Sbjct: 794 YGARPLRRAVTRIIEDAVSESLLSSHYSEGDTALLDLDASGNPVVVQH 841
>gi|373106264|ref|ZP_09520567.1| hypothetical protein HMPREF9623_00231 [Stomatobaculum longum]
gi|371652639|gb|EHO18047.1| hypothetical protein HMPREF9623_00231 [Stomatobaculum longum]
Length = 839
Score = 317 bits (813), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 153/276 (55%), Positives = 202/276 (73%), Gaps = 11/276 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R RVG++DP+RPI SFLF GPTGVGKTEL+ ALA FG+++A++R+DMSEYMEKH+
Sbjct: 532 AIRRGRVGLKDPHRPIGSFLFLGPTGVGKTELSKALAEAMFGTEQALIRVDMSEYMEKHS 591
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+E GGQL+E VR P+SVILFDEIEKAH DV N++LQ+LDDG +TD
Sbjct: 592 VSKIVGSPPGYVGYEEGGQLSEKVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDS 651
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
+G+ +D KNT++IMTSN G S I LG M+ GV +E+RR F+PEF
Sbjct: 652 QGRKIDFKNTVLIMTSNAGASRIVSPKTLGFAARENKETDYKNMKDGVMDEVRRLFKPEF 711
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAK-NMELTVTHTFKKKLIEEGYNPSY 230
LNRIDE++VF QL++ + +IVDI+L I +R E++ ++L+ ++ LIE+GY+P Y
Sbjct: 712 LNRIDEIVVFHQLDRDNMKQIVDILLGNIEKRSESQMEIKLSFEDAAREFLIEKGYDPKY 771
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
GARPLRRAI LED LAE +L ++ GD V + C
Sbjct: 772 GARPLRRAIQNELEDKLAEAMLDDKVKAGDEVLVTC 807
>gi|403669832|ref|ZP_10935008.1| negative regulator of genetic competence clpC/mecB [Kurthia sp.
JC8E]
Length = 817
Score = 317 bits (812), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 151/282 (53%), Positives = 203/282 (71%), Gaps = 9/282 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTEL ALA FG ++AM+RIDMSEYMEKH+
Sbjct: 526 AIRRARAGLKDPKRPIGSFIFLGPTGVGKTELGRALAEVMFGDEDAMIRIDMSEYMEKHS 585
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG++ GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 586 TSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLDDGRLTDS 645
Query: 122 KGQTVDLKNTIIIMTSNIGDSVI---------ARESILGSDQMERGVAEELRRRFRPEFL 172
KG+ VD +NT++IMTSNIG + A+E+ ++ + + EEL++ FRPEFL
Sbjct: 646 KGRVVDFRNTVVIMTSNIGAEALKYRKSVGFGAQETAKAAETSKDVMLEELKKAFRPEFL 705
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE IVF+ L K +L+EIV M +++ +RL + +EL +T K+ EEGY+P YGA
Sbjct: 706 NRIDETIVFQSLKKEELVEIVSKMSEQLTKRLAEQKIELELTPAALDKIAEEGYDPEYGA 765
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
RP+RRA+ + +ED L+E IL G + G+ V D D+ G I+
Sbjct: 766 RPIRRALQKHVEDRLSEEILKGEVLTGNVVVFDVDADGKFIV 807
>gi|220908358|ref|YP_002483669.1| ATP-dependent chaperone ClpB [Cyanothece sp. PCC 7425]
gi|219864969|gb|ACL45308.1| ATP-dependent chaperone ClpB [Cyanothece sp. PCC 7425]
Length = 872
Score = 317 bits (812), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 154/269 (57%), Positives = 199/269 (73%), Gaps = 6/269 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRPI+SF+F GPTGVGKTELA ALA F ++EAMVRIDMSEYMEKH+
Sbjct: 589 AIQRSRAGLADPNRPIASFIFLGPTGVGKTELAKALAAYLFDTEEAMVRIDMSEYMEKHS 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEA+R RP++VILFDEIEKAH DV N+MLQ+LDDGRVTD
Sbjct: 649 VSRLVGAPPGYVGYEEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNIMLQILDDGRVTDS 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD----QMERGVAEELRRRFRPEFLNRIDE 177
+G+TVD KNT+IIMTSNIG I + G D +M+ V E +R FRPEFLNRIDE
Sbjct: 709 QGRTVDFKNTVIIMTSNIGSQYIL--DLAGDDSRYAEMQERVMEAMRASFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+F L K +L +IV + ++ + +RL + M L ++ + L E GY+P +GARPL+R
Sbjct: 767 IIIFHSLRKDELRQIVKLQVQRLEQRLSDRKMSLKLSESALDFLAEVGYDPVFGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
AI R LE +A+ IL G GD++ +D
Sbjct: 827 AIQRELETPIAKSILRGEFHDGDTIFVDV 855
>gi|269926504|ref|YP_003323127.1| ATPase AAA-2 domain protein [Thermobaculum terrenum ATCC BAA-798]
gi|269790164|gb|ACZ42305.1| ATPase AAA-2 domain protein [Thermobaculum terrenum ATCC BAA-798]
Length = 815
Score = 317 bits (812), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 152/276 (55%), Positives = 203/276 (73%), Gaps = 10/276 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SF+F GPTGVGKTELA ALA F +EAMVRIDMSEY E+HT
Sbjct: 525 AIRRSRAGLSDPNRPIGSFIFLGPTGVGKTELARALAEFLFDDREAMVRIDMSEYGERHT 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ GSPPGYVG++ GGQLTE VR RP+ VILFDEIEKAH +V NVMLQ+LDDGR+TDG
Sbjct: 585 VSRLIGSPPGYVGYDEGGQLTEVVRRRPYQVILFDEIEKAHPEVFNVMLQILDDGRLTDG 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
G+TVD +NT+IIMTSN+G I + LG ++E V LR FRPEF
Sbjct: 645 HGRTVDFRNTVIIMTSNVGTGWIEQYQPLGFTRAVDSRGEQKKLEDAVTRALRETFRPEF 704
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNRIDE+IVF L + Q+++IVDI L ++ +RLE + + L +T K+ L +EG++P++G
Sbjct: 705 LNRIDEIIVFHPLTREQILQIVDIQLGDLKKRLEERKINLELTQAAKEWLADEGFDPTFG 764
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
ARPL+R I + +E+ +++++++G I+ GD+V +D D
Sbjct: 765 ARPLKRTIQKNIENVISKMLISGEIKEGDTVVVDRD 800
>gi|358052016|ref|ZP_09146007.1| endopeptidase [Staphylococcus simiae CCM 7213]
gi|357258496|gb|EHJ08562.1| endopeptidase [Staphylococcus simiae CCM 7213]
Length = 816
Score = 317 bits (812), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 152/272 (55%), Positives = 201/272 (73%), Gaps = 9/272 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFLNRI 175
TVD +NTIIIMTSN+G + + G + + + + +EL+ FRPEFLNR+
Sbjct: 646 TVDFRNTIIIMTSNVGAQELQDQRFAGFGGASEGQDYETIRKTMMKELKNAFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L+K +L EIV +M+K++ +RL +N+ + VT K K+ EEGY+P YGARPL
Sbjct: 706 DDIIVFHKLSKDELKEIVTMMVKKLTDRLSEQNINIKVTDKAKDKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RAI + +EDNL+E+IL G G VT+D D
Sbjct: 766 IRAIQKTIEDNLSELILDGNKIEGKEVTVDHD 797
>gi|390934090|ref|YP_006391595.1| ATPase [Thermoanaerobacterium saccharolyticum JW/SL-YS485]
gi|389569591|gb|AFK85996.1| ATPase AAA-2 domain protein [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 810
Score = 317 bits (811), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 148/272 (54%), Positives = 205/272 (75%), Gaps = 11/272 (4%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTGVGKTEL+ ALA FG + A+VRIDMSEYMEK +VS+ GS
Sbjct: 532 GLKDPKRPIGSFIFLGPTGVGKTELSKALAEAMFGDESAIVRIDMSEYMEKFSVSRLIGS 591
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG+E GG+LTE +R +P+SVILFDEIEKAH DV N++LQ+LDDGR+TD KG+TVD
Sbjct: 592 PPGYVGYEEGGELTEKIRRKPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSKGRTVDF 651
Query: 129 KNTIIIMTSNIGDSVIARESILG-----------SDQMERGVAEELRRRFRPEFLNRIDE 177
KNT+IIMTSN+G +I +++ LG ++M+ + EEL++ FRPEFLNRID+
Sbjct: 652 KNTLIIMTSNVGAQLIKKQTTLGFMPESNAEKESYEKMKENILEELKKSFRPEFLNRIDD 711
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+IVFRQL + + +I D+M+ ++ +RL+ N+ L T K++L++EGY+ +YGARPLRR
Sbjct: 712 IIVFRQLTQDDIRKITDLMIADLNKRLKDNNISLEFTDDAKEELLKEGYDVTYGARPLRR 771
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
AI +++E L+E++L G I+ GD + + G
Sbjct: 772 AIQKVVESELSELMLKGEIKSGDKILVKLKDG 803
>gi|384431672|ref|YP_005641032.1| ATP-dependent chaperone ClpB [Thermus thermophilus SG0.5JP17-16]
gi|333967140|gb|AEG33905.1| ATP-dependent chaperone ClpB [Thermus thermophilus SG0.5JP17-16]
Length = 854
Score = 317 bits (811), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 158/274 (57%), Positives = 197/274 (71%), Gaps = 4/274 (1%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DPNRPI SFLF GPTGVGKTELA LA F ++EAM+RIDM+EYMEKH
Sbjct: 573 AIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHA 632
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEAVR RP+SVILFDEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 633 VSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDS 692
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMER---GVAEELRRRFRPEFLNRIDEV 178
G+TVD +NT+II+TSN+G +I E I ER V L++ FRPEFLNR+DE+
Sbjct: 693 HGRTVDFRNTVIILTSNLGSPLIL-EGIQKGWPYERIRDEVFRVLQQHFRPEFLNRLDEI 751
Query: 179 IVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRA 238
+VFR L K Q+ +IV+I L + ERL K + L +T K L E GY+P +GARPL+R
Sbjct: 752 VVFRPLTKEQIRQIVEIQLGYLRERLSEKRIALELTEAAKDFLAERGYDPVFGARPLKRV 811
Query: 239 IGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
I R LE LA+ IL G ++ GD V +D G V
Sbjct: 812 IQRELETPLAQKILAGEVKEGDRVQVDVGPAGLV 845
>gi|428211800|ref|YP_007084944.1| ATP-dependent chaperone ClpB [Oscillatoria acuminata PCC 6304]
gi|428000181|gb|AFY81024.1| ATP-dependent chaperone ClpB [Oscillatoria acuminata PCC 6304]
Length = 874
Score = 317 bits (811), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 153/271 (56%), Positives = 198/271 (73%), Gaps = 6/271 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRP++SF+F GPTGVGKTELA ALA F ++E+MVRIDMSEYMEKH
Sbjct: 588 AIQRSRAGLSDPNRPVASFIFLGPTGVGKTELAKALAAYLFDTEESMVRIDMSEYMEKHA 647
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQL+EAVR RP+SVILFDEIEKAH DV N+MLQ+LDDGRVTD
Sbjct: 648 VSRLVGAPPGYVGYEEGGQLSEAVRRRPYSVILFDEIEKAHPDVFNIMLQILDDGRVTDA 707
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD----QMERGVAEELRRRFRPEFLNRIDE 177
+G TVD KN++IIMTSN+G I + G D +M V E +R FRPEFLNRIDE
Sbjct: 708 QGHTVDFKNSVIIMTSNVGSQFIL--DVSGEDEEYEEMRGRVMEAMRSNFRPEFLNRIDE 765
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+F L K QL +IV + ++ + ERL + M L ++ + L E GY+P YGARPL+R
Sbjct: 766 MIIFHSLKKEQLRQIVQLQVERVIERLRDRKMSLKLSDSAVSFLAEVGYDPVYGARPLKR 825
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDS 268
+I R LE +A+ IL G GD++ +D ++
Sbjct: 826 SIQRELETQIAKSILRGDFTTGDTIFVDVEN 856
>gi|302779890|ref|XP_002971720.1| hypothetical protein SELMODRAFT_147913 [Selaginella moellendorffii]
gi|300160852|gb|EFJ27469.1| hypothetical protein SELMODRAFT_147913 [Selaginella moellendorffii]
Length = 864
Score = 317 bits (811), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 151/288 (52%), Positives = 205/288 (71%), Gaps = 12/288 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG++DP+RPI++ LF GPTGVGKTEL ALA +FG+++AM+R+DMSEYME+HT
Sbjct: 554 AVRRARVGLKDPSRPIAAMLFCGPTGVGKTELTKALAQHFFGAEDAMIRLDMSEYMERHT 613
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GG LTEAVR RP +VIL DEIEKAH D+ N++LQ+ +DGR+TD
Sbjct: 614 VSKLIGSPPGYVGYGEGGTLTEAVRKRPFTVILLDEIEKAHPDIFNMLLQIFEDGRLTDS 673
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR--ESILGSDQMERG----------VAEELRRRFRP 169
+G+ V +N+++IMTSN+G S IAR +G E G V +EL+ FRP
Sbjct: 674 QGRVVSFRNSLLIMTSNVGSSAIARGGSGKIGFSFAEGGDEDYTNLKGLVMDELKNFFRP 733
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
E LNRIDEV+VFR L K Q+ IVD+ML E ERL + + L V+ K + +EGY+ +
Sbjct: 734 ELLNRIDEVVVFRSLEKAQVRAIVDMMLAETKERLAKRGINLEVSEAAVKLVCDEGYDKA 793
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRH 277
YGARPLRRA+ R++ED ++E +L + GD+ +D D+ GN ++ +H
Sbjct: 794 YGARPLRRAVTRIIEDAVSESLLASHYSEGDTALLDLDASGNPVVVQH 841
>gi|377561491|ref|ZP_09790942.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
otitidis NBRC 100426]
gi|377521335|dbj|GAB36107.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
otitidis NBRC 100426]
Length = 848
Score = 317 bits (811), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 150/262 (57%), Positives = 196/262 (74%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G+ DPNRPI SFLF GPTGVGKTELA ALA FG ++ M+R DMSE+ EKH V++
Sbjct: 546 RARAGLSDPNRPIGSFLFLGPTGVGKTELAKALAAAVFGDEDRMIRFDMSEFQEKHNVAR 605
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E+ GQLT+ VR +P+SVILFDEIEKAH DV NV+LQLLDDGRVTDG+G+
Sbjct: 606 LVGAPPGYVGYEDAGQLTDKVRRQPYSVILFDEIEKAHPDVFNVLLQLLDDGRVTDGQGR 665
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVFRQL 184
TVD KNT++IMTSNIG +I +++ V + LR+RFRPEFLNRIDE +VF +L
Sbjct: 666 TVDFKNTLVIMTSNIGSDLILNAPDGDVEKVVPDVMDLLRQRFRPEFLNRIDETVVFDRL 725
Query: 185 NKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGRLLE 244
+K QL +IVD+ L L+++++ L VT K +L EEGY P +GARPLRR I + L+
Sbjct: 726 DKTQLRQIVDLTLDGTRRMLKSQSIALEVTDAAKDQLAEEGYEPEFGARPLRRLIQKQLD 785
Query: 245 DNLAEIILTGYIQVGDSVTMDC 266
+ L+ ++L G ++ GD+V +D
Sbjct: 786 NELSNLVLKGAVEPGDTVVVDA 807
>gi|443322190|ref|ZP_21051221.1| ATP-dependent chaperone ClpB [Gloeocapsa sp. PCC 73106]
gi|442788076|gb|ELR97778.1| ATP-dependent chaperone ClpB [Gloeocapsa sp. PCC 73106]
Length = 870
Score = 317 bits (811), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 153/270 (56%), Positives = 196/270 (72%), Gaps = 6/270 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRPI+SF+F GPTGVGKTELA ALA F S+ AMVRIDMSEYMEKH
Sbjct: 589 AIQRSRAGLADPNRPIASFIFLGPTGVGKTELAKALAVSLFDSESAMVRIDMSEYMEKHA 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTE +R RP++V+LFDEIEKAH DV NVMLQ+LDDGR+TD
Sbjct: 649 VSRLIGAPPGYVGYEEGGQLTEVIRRRPYAVVLFDEIEKAHPDVFNVMLQILDDGRLTDS 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD----QMERGVAEELRRRFRPEFLNRIDE 177
+G VD KNTIIIMTSNIG I + G D QM+ V E +R+ FRPEFLNRIDE
Sbjct: 709 QGHVVDFKNTIIIMTSNIGSQYIL--DVAGDDSQYEQMKSRVIEVMRQNFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+F L QL EIV+I ++++ +RL + + L ++ + L GY+P YGARPL+R
Sbjct: 767 MIIFHSLKPSQLNEIVEIQVRQLEKRLAEQKLTLKLSEAARSFLASVGYDPVYGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
AI R LE +A+ IL G + D++ +D +
Sbjct: 827 AIQRYLETPIAKAILRGEFKPDDTIWVDIE 856
>gi|410696680|gb|AFV75748.1| ATP-dependent chaperone ClpB [Thermus oshimai JL-2]
Length = 854
Score = 316 bits (810), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 154/271 (56%), Positives = 198/271 (73%), Gaps = 2/271 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DPNRPI SFLF GPTGVGKTELA LA F ++EAMVRIDM+EYMEKH
Sbjct: 573 AIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMVRIDMTEYMEKHA 632
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEAVR RP++VILFDEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 633 VSRLIGAPPGYVGYEEGGQLTEAVRRRPYTVILFDEIEKAHPDVFNLLLQILDDGRLTDS 692
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR--ESILGSDQMERGVAEELRRRFRPEFLNRIDEVI 179
G+TVD +NT+II+TSN+G +I + L + + V EL+R FRPEFLNR+DE++
Sbjct: 693 HGRTVDFRNTVIILTSNLGSPLILEGLQQGLPYEAIRDRVFRELQRHFRPEFLNRLDEIV 752
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
+FR L+K Q+ +IV+I L + RL + + L +T K L E GY+P +GARPL+R I
Sbjct: 753 LFRPLSKEQIRQIVEIQLANLRARLGERRISLELTEAAKDFLAERGYDPVFGARPLKRVI 812
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGG 270
R LE LAE IL+G I+ GD V ++ G
Sbjct: 813 QRALETPLAEKILSGEIKDGDKVVVEATPQG 843
>gi|147678457|ref|YP_001212672.1| ATPase with chaperone activity, ATP-binding subunit [Pelotomaculum
thermopropionicum SI]
gi|146274554|dbj|BAF60303.1| ATPase with chaperone activity, ATP-binding subunit [Pelotomaculum
thermopropionicum SI]
Length = 871
Score = 316 bits (810), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 154/282 (54%), Positives = 198/282 (70%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G+ DPNRP+ SF+F GPTGVGKTELA ALA F + AM+R DMSEYMEKH
Sbjct: 586 AIRRARAGVADPNRPMGSFIFLGPTGVGKTELARALAHFLFNDERAMLRFDMSEYMEKHA 645
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTEAVR RP++VILFDEIEKAH DV N++LQLLDDGR+TDG
Sbjct: 646 VSRLIGAPPGYVGYDEGGQLTEAVRRRPYAVILFDEIEKAHPDVFNILLQLLDDGRLTDG 705
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVF 181
G+TVD KNT++IMTSN+G ++ ++E V +EL+ FRPEFLNRIDEV++F
Sbjct: 706 HGRTVDFKNTVVIMTSNLGSHWFREINLKNRAELEARVMDELKASFRPEFLNRIDEVVIF 765
Query: 182 RQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGR 241
L K +L++IVDI L + RL + L VT K L EEG++P YGARPL+RAI R
Sbjct: 766 NNLGKEELIKIVDIQLNLLKARLAKLGLTLEVTPEVKALLAEEGFDPVYGARPLKRAIQR 825
Query: 242 LLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMT 283
LE+ L+ IL G GDS+ + D + ++ R+ +
Sbjct: 826 RLENPLSVHILEGKHAQGDSILVTVDKATGSLTFQSRSSAQA 867
>gi|428310426|ref|YP_007121403.1| ATP-dependent chaperone ClpB [Microcoleus sp. PCC 7113]
gi|428252038|gb|AFZ17997.1| ATP-dependent chaperone ClpB [Microcoleus sp. PCC 7113]
Length = 875
Score = 316 bits (810), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 152/269 (56%), Positives = 196/269 (72%), Gaps = 2/269 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRP +SF+F GPTGVGKTELA ALA F +++A+VRIDMSEYMEKH
Sbjct: 589 AIQRSRAGLSDPNRPTASFIFLGPTGVGKTELAKALASYLFDTEDALVRIDMSEYMEKHA 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTE++R RP++VILFDEIEKAH DV NVMLQ+LDDGRVTD
Sbjct: 649 VSRLIGAPPGYVGYEEGGQLTESIRRRPYAVILFDEIEKAHPDVFNVMLQILDDGRVTDA 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS--DQMERGVAEELRRRFRPEFLNRIDEVI 179
+G TVD KNT+IIMTSN+G I + S D+M V E +R FRPEFLNRIDE+I
Sbjct: 709 QGHTVDFKNTVIIMTSNVGSQYILDLATEDSQYDEMRSRVMEAMRSSFRPEFLNRIDEII 768
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
+F L K QL IV + +K + +RL + M L ++ + L E GY+P +GARPL+RAI
Sbjct: 769 IFHSLQKHQLRHIVQLQVKRLEQRLADRKMSLKLSESALDFLAEVGYDPVFGARPLKRAI 828
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDS 268
R LE +A+ IL G GD++ +D ++
Sbjct: 829 QRELETQIAKAILRGEFNDGDTIFVDVEN 857
>gi|379794996|ref|YP_005324994.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus MSHR1132]
gi|356871986|emb|CCE58325.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus MSHR1132]
Length = 818
Score = 316 bits (810), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 153/272 (56%), Positives = 200/272 (73%), Gaps = 9/272 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG----SDQME-----RGVAEELRRRFRPEFLNRI 175
TVD +NTIIIMTSN+G + + G SD+ + + + +EL+ FRPEFLNR+
Sbjct: 646 TVDFRNTIIIMTSNVGAQELQDQRFAGFGGSSDEQDYETIRKTMLKELKNSFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L K +L EIV +M+ ++ RL +N+ + VT K K+ EEGY+P YGARPL
Sbjct: 706 DDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIVVTDKAKDKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RAI + +EDNL+E+IL G G VT+D D
Sbjct: 766 IRAIQKTIEDNLSELILDGNKIEGKKVTVDHD 797
>gi|78184486|ref|YP_376921.1| ATPase [Synechococcus sp. CC9902]
gi|78168780|gb|ABB25877.1| ATPase [Synechococcus sp. CC9902]
Length = 862
Score = 316 bits (810), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 157/278 (56%), Positives = 201/278 (72%), Gaps = 6/278 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRPI+SFLF GPTGVGKTEL+ ALA F S +AMVRIDMSEYMEKHT
Sbjct: 588 AIQRSRAGLSDPNRPIASFLFLGPTGVGKTELSKALANRLFDSDDAMVRIDMSEYMEKHT 647
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEAVR RP++VILFDE+EKAH DV NVMLQ+LDDGRVTDG
Sbjct: 648 VSRLIGAPPGYVGYEAGGQLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDG 707
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQ---MERGVAEELRRRFRPEFLNRIDEV 178
+G+TVD NT++I+TSNIG I E DQ ME V E L+ FRPEFLNR+D+
Sbjct: 708 QGRTVDFTNTVLILTSNIGSQSIL-ELAGDPDQHQAMEARVNEALKAHFRPEFLNRLDDQ 766
Query: 179 IVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRA 238
I+F L K +L +IV + + + +RLEA+ ++L ++ L GY+P YGARPL+RA
Sbjct: 767 IIFHSLRKDELKQIVTLQVARLQQRLEARKLDLQLSPEASDWLANAGYDPVYGARPLKRA 826
Query: 239 IGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYR 276
I R LE +A+ IL G GD ++++ S N + +R
Sbjct: 827 IQRELETPIAKAILAGQYSEGDVISLEVAS--NSLAFR 862
>gi|407474767|ref|YP_006789167.1| chaperone protein ClpB [Clostridium acidurici 9a]
gi|407051275|gb|AFS79320.1| chaperone protein ClpB [Clostridium acidurici 9a]
Length = 818
Score = 316 bits (810), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 156/287 (54%), Positives = 210/287 (73%), Gaps = 15/287 (5%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RARVG++DPN+PI +F+F GPTGVGKT L +LA FG ++A++RIDMSEYMEKH+VSK
Sbjct: 530 RARVGLKDPNKPIGTFIFVGPTGVGKTYLTKSLAEALFGDEDAVIRIDMSEYMEKHSVSK 589
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPGYVG++ GGQLTE VR +P+SVILFDE+EKAH +V N++LQLLDDGR+TD KG+
Sbjct: 590 LVGSPPGYVGYDEGGQLTEKVRRKPYSVILFDEVEKAHPEVFNILLQLLDDGRLTDSKGR 649
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG-------------SDQMERGVAEELRRRFRPEF 171
VD KNT+II+TSN+G S I +++ LG ++M+ + EEL+R FRPEF
Sbjct: 650 VVDFKNTVIILTSNVGASTIKKQNTLGFSAPSEDKVEKKEYEKMKENIMEELKRTFRPEF 709
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNRIDE IVF LNK + +IV+IM+K++ +RLE N+ + VT + + E+G++P YG
Sbjct: 710 LNRIDETIVFHPLNKDHIKQIVNIMVKDLEKRLEKLNIHIEVTEKARDYIGEKGFDPDYG 769
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHR 278
ARPL RAI L+E+ L+E +L G I DSV +D D G +++ R
Sbjct: 770 ARPLERAIRNLVENELSEEMLRGNISKDDSVEIDFD--GEKLVFNKR 814
>gi|148239084|ref|YP_001224471.1| chaperone ClpB [Synechococcus sp. WH 7803]
gi|147847623|emb|CAK23174.1| Chaperone ClpB [Synechococcus sp. WH 7803]
Length = 722
Score = 316 bits (810), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 154/272 (56%), Positives = 200/272 (73%), Gaps = 8/272 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRPI+SFLF GPTGVGKTEL+ ALA + F S+EAMVRIDMSEYMEKHT
Sbjct: 441 AIQRSRAGLSDPNRPIASFLFLGPTGVGKTELSKALAAQLFDSEEAMVRIDMSEYMEKHT 500
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEAVR RP++VILFDE+EKAH DV NVMLQ+LDDGRVTDG
Sbjct: 501 VSRLIGAPPGYVGYEAGGQLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDG 560
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD-----QMERGVAEELRRRFRPEFLNRID 176
+G+TVD N ++I+TSNIG I LG D +MER V E LR FRPEFLNR+D
Sbjct: 561 QGRTVDFTNAVLILTSNIGSQSILD---LGGDDGQHGEMERRVNEALRAHFRPEFLNRLD 617
Query: 177 EVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLR 236
+ I+F L + +L +IV + ++ + RL+ + + L ++ L GY+P YGARPL+
Sbjct: 618 DQIIFHSLRRDELRQIVTLQVERLRARLDERKLGLNLSEAATDWLANAGYDPVYGARPLK 677
Query: 237 RAIGRLLEDNLAEIILTGYIQVGDSVTMDCDS 268
RA+ R LE +A+ IL+G GD+V +D ++
Sbjct: 678 RAVQRELETPIAKAILSGRYGDGDTVHVDVEA 709
>gi|406983152|gb|EKE04399.1| hypothetical protein ACD_20C00084G0019 [uncultured bacterium]
Length = 837
Score = 316 bits (810), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 151/278 (54%), Positives = 206/278 (74%), Gaps = 11/278 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG++ P+RPI SF+F+GPTGVGKTELA ALA FGS+E M+RIDMSE+ME+HT
Sbjct: 523 AIRRARVGLKSPSRPIGSFIFSGPTGVGKTELAKALAESMFGSEENMIRIDMSEFMERHT 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
SK GSPPGYVG+ GGQLTEA+R RP+SV+LFDEIEKAH DV N++LQ+LDDGR++D
Sbjct: 583 TSKLIGSPPGYVGYNEGGQLTEAIRKRPYSVVLFDEIEKAHPDVFNLLLQILDDGRLSDS 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG--------SDQMER---GVAEELRRRFRPE 170
+G+ + KN++IIMTSN+G + S LG D+ ER V EE+++ FRPE
Sbjct: 643 RGRVTNFKNSVIIMTSNVGARSLENTSKLGFAVAEDEEKDRYERVKDTVMEEMKKEFRPE 702
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNR+D++IVF L K ++ +IVDIML ++ +R++ + + L + + K L EEGY+ +Y
Sbjct: 703 FLNRLDDIIVFSHLTKEEIRKIVDIMLTDLIKRIKGQELMLEIPNEVKDFLAEEGYSQTY 762
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDS 268
GARPLRR I + +ED++AE ILTG + GD + +D D+
Sbjct: 763 GARPLRRVIQKRIEDSIAEEILTGAYKEGDVIKLDLDN 800
>gi|284007736|emb|CBA73548.1| protein disaggregation chaperone [Arsenophonus nasoniae]
Length = 863
Score = 316 bits (810), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 152/269 (56%), Positives = 200/269 (74%), Gaps = 1/269 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F S +AMVRIDMSE+MEKHT
Sbjct: 589 AIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFLFDSDDAMVRIDMSEFMEKHT 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEA+R RP+SVIL DEIEKAH DV N++LQ+LDDGR+TDG
Sbjct: 649 VSRLVGAPPGYVGYEEGGYLTEAIRRRPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDG 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA-RESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT++IMTSN+G +I R LG ++M+ V E + R FRPEF+NRIDEV+V
Sbjct: 709 QGRTVDFRNTVVIMTSNLGSDLIQERFGSLGYNEMKEIVMEVVSRSFRPEFINRIDEVVV 768
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F LNK Q+ +I I L +Y+R+E + ++ + +KL E G++P +GARPL+RAI
Sbjct: 769 FHPLNKEQITDIAQIQLSRLYKRMEEQGYKVKIKPAALEKLSEAGFDPVFGARPLKRAIQ 828
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
+ +E+ LAE +L+G + G VT+D G
Sbjct: 829 QEIENPLAEQMLSGKLVPGKQVTLDIKKG 857
>gi|379708456|ref|YP_005263661.1| ATP-dependent Clp protease ATP-binding subunit clpC [Nocardia
cyriacigeorgica GUH-2]
gi|374845955|emb|CCF63025.1| ATP-dependent Clp protease ATP-binding subunit clpC [Nocardia
cyriacigeorgica GUH-2]
Length = 819
Score = 316 bits (810), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 153/285 (53%), Positives = 201/285 (70%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DPNRPI SFLF GPTGVGKTELA ALA FG ++ ++R DMSE+ EKHT
Sbjct: 533 AVRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKALAEAVFGDEDRLIRFDMSEFQEKHT 592
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+++ QLT+ VR +P+SVILFDEIEKAH DV NV+LQLLDDGRVTD
Sbjct: 593 VSRLVGAPPGYVGYDDAAQLTDKVRRQPYSVILFDEIEKAHPDVFNVLLQLLDDGRVTDS 652
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVF 181
KG+TVD KNTI+IMTSNIG +I D + + E LR FRPEFLNRID+ IVF
Sbjct: 653 KGRTVDFKNTIVIMTSNIGSDLILSAPDGDLDSITPTLNERLRSHFRPEFLNRIDDTIVF 712
Query: 182 RQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGR 241
+L++ Q+ IVD++L L A++++L VT L E GY P +GARPLRR + +
Sbjct: 713 HRLDQAQIHRIVDLVLDGTRRLLHAQDIDLDVTDPAVDWLAEHGYQPEFGARPLRRTVQK 772
Query: 242 LLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMTVCA 286
+++ L+ ++L G ++ GD+V +D D GG + R G+ TV A
Sbjct: 773 EVDNKLSRLLLDGDLKSGDTVRLDADGGGLQLAAVERRGAKTVEA 817
>gi|407475965|ref|YP_006789842.1| class III stress response-related ATPase [Exiguobacterium
antarcticum B7]
gi|407060044|gb|AFS69234.1| class III stress response-related ATPase [Exiguobacterium
antarcticum B7]
Length = 815
Score = 316 bits (810), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 156/293 (53%), Positives = 203/293 (69%), Gaps = 11/293 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA A+A FG ++A++RIDMSEYMEKH
Sbjct: 523 AIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARAVAEAMFGDEDAIIRIDMSEYMEKHA 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG+E GGQLTE VR +P+SVIL DEIEKAH +V N++LQ+LDDGR+TD
Sbjct: 583 TSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVILLDEIEKAHPEVFNILLQVLDDGRLTDS 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---SDQMER-------GVAEELRRRFRPEF 171
KG+TVD +NTII+MTSN+G S + R +G SD +R V +EL++ FRPEF
Sbjct: 643 KGRTVDFRNTIIVMTSNVGASALKRNKYVGFAVSDDTDREYKDMKGKVMDELKKAFRPEF 702
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNRIDE IVF L K + EIV +M K + +RL + + +T K+ + GY+P YG
Sbjct: 703 LNRIDETIVFHSLEKKHIEEIVKLMAKTLEKRLAEQQVHFELTPAALSKIADIGYDPEYG 762
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMTV 284
ARP+RRA+ R ED L+E +L G IQ G+ V +D + G I+ RH+ T
Sbjct: 763 ARPIRRALQREAEDRLSEALLAGDIQKGERVALDVED-GEFIVRRHQAEPATT 814
>gi|317969669|ref|ZP_07971059.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Synechococcus sp. CB0205]
Length = 872
Score = 316 bits (810), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 157/273 (57%), Positives = 197/273 (72%), Gaps = 12/273 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRPI+SFLF GPTGVGKTEL+ ALA + F S+EAMVRIDMSEYMEKHT
Sbjct: 587 AIQRSRAGLSDPNRPIASFLFLGPTGVGKTELSKALASQLFDSEEAMVRIDMSEYMEKHT 646
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEAVR RP++VILFDE+EKAH DV NVMLQ+LDDGRVTDG
Sbjct: 647 VSRLIGAPPGYVGYEEGGQLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDG 706
Query: 122 KGQTVDLKNTIIIMTSNIGDSVI-------ARESILGSDQMERGVAEELRRRFRPEFLNR 174
+G+TVD NT++I+TSNIG I AR S +ME V E LR FRPEFLNR
Sbjct: 707 QGRTVDFTNTVLILTSNIGSQSILDLAGDPARHS-----EMEARVNEALRGHFRPEFLNR 761
Query: 175 IDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARP 234
+DE I+F L + +L +IV++ ++ + +RLE K + L V L GY+P YGARP
Sbjct: 762 LDETIIFHSLKQEELRQIVELQIQRLAKRLEDKKLGLQVNADALDWLAGVGYDPVYGARP 821
Query: 235 LRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
L+RAI + LE +A+ IL G G V +D +
Sbjct: 822 LKRAIQKELETPIAKGILAGQFSAGHDVAVDVE 854
>gi|323703791|ref|ZP_08115429.1| ATPase AAA-2 domain protein [Desulfotomaculum nigrificans DSM 574]
gi|323531260|gb|EGB21161.1| ATPase AAA-2 domain protein [Desulfotomaculum nigrificans DSM 574]
Length = 818
Score = 316 bits (810), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 155/279 (55%), Positives = 202/279 (72%), Gaps = 11/279 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RP+ SF+F GPTGVGKTELA ALA FG ++A+VRIDMSEYMEKH
Sbjct: 528 AVRRARAGLKDPKRPVGSFIFLGPTGVGKTELARALAEALFGDEDALVRIDMSEYMEKHA 587
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTEAVR +P+SV+L DEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 588 VSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDA 647
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----SDQ-------MERGVAEELRRRFRPE 170
KG+TVD +NT+IIMTSN+G S I +G +DQ M+ V E L+R FRPE
Sbjct: 648 KGRTVDFRNTVIIMTSNVGLSTIKSVGRVGFAAQADQNEAEYEKMKERVEEALKRTFRPE 707
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNRIDE IVF LN+ + +IV +MLKE+ +R+E + + T K+KL E GY+ Y
Sbjct: 708 FLNRIDETIVFHPLNREHIKQIVGLMLKEVAKRMEEHEVYVEFTEAAKEKLAEIGYSEEY 767
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
GARPLRR I R +ED L+E ++ G + GD V +D ++G
Sbjct: 768 GARPLRREIQRKVEDRLSEELIKGTFKKGDKVVIDVENG 806
>gi|240144490|ref|ZP_04743091.1| negative regulator of genetic competence ClpC/mecB [Roseburia
intestinalis L1-82]
gi|257203477|gb|EEV01762.1| negative regulator of genetic competence ClpC/mecB [Roseburia
intestinalis L1-82]
Length = 815
Score = 316 bits (810), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 155/267 (58%), Positives = 195/267 (73%), Gaps = 11/267 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R RVG++DP RPI SFLF GPTGVGKTE++ ALA FGS+++M+R+DMSEYMEKH+
Sbjct: 530 AVRRGRVGLKDPKRPIGSFLFLGPTGVGKTEISKALAEAVFGSEQSMIRVDMSEYMEKHS 589
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG E GGQL+E VR P+SVILFDEIEKAH DV N++LQ+LDDG +TD
Sbjct: 590 VSKMIGSPPGYVGHEEGGQLSEKVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDS 649
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
+G+ VD KNTIIIMTSN G I LG D+M+ V EE+RR F+PEF
Sbjct: 650 QGRKVDFKNTIIIMTSNAGAQAIIEPKKLGFAVSDDEKQNYDRMKNSVMEEVRRIFKPEF 709
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAK-NMELTVTHTFKKKLIEEGYNPSY 230
LNRIDE IVFR LNK + +IV +MLKE+ +R E + + LTV + KK ++++ Y+P Y
Sbjct: 710 LNRIDETIVFRALNKDDMKQIVALMLKELTDRCEKQMGIHLTVRDSVKKHIVDKAYDPKY 769
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQ 257
GARPLRR I +ED LAE IL+G ++
Sbjct: 770 GARPLRRQIQNDIEDELAEEILSGKVK 796
>gi|149183498|ref|ZP_01861926.1| ClpC [Bacillus sp. SG-1]
gi|148848792|gb|EDL63014.1| ClpC [Bacillus sp. SG-1]
Length = 813
Score = 316 bits (809), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 149/272 (54%), Positives = 199/272 (73%), Gaps = 9/272 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +E+M+RIDMSEYMEKH+ S+
Sbjct: 526 RARAGLKDPKRPIGSFVFLGPTGVGKTELARALAESMFGDEESMIRIDMSEYMEKHSTSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPGYVG+E GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+L+DGR+TD KG+
Sbjct: 586 LVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSD---------QMERGVAEELRRRFRPEFLNRI 175
TVD +NT++IMTSN+G + + +G + M+ V EEL+R FRPEFLNRI
Sbjct: 646 TVDFRNTVLIMTSNVGAESLKKNKHVGFNIQDGEQDYKDMKGKVMEELKRAFRPEFLNRI 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
DE+IVF L K L EIV +M ++ RL+ +++ L +T K+K+ +EG++P YGARPL
Sbjct: 706 DEIIVFHSLEKAHLKEIVTLMSDQLTTRLKEQDISLELTDAAKEKIADEGFDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RRAI + +ED L+E +L G + G + +D +
Sbjct: 766 RRAIQKHIEDRLSEELLRGTVLTGQHIVIDVE 797
>gi|218134185|ref|ZP_03462989.1| hypothetical protein BACPEC_02075 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991560|gb|EEC57566.1| ATPase family associated with various cellular activities (AAA)
[[Bacteroides] pectinophilus ATCC 43243]
Length = 819
Score = 316 bits (809), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 158/279 (56%), Positives = 206/279 (73%), Gaps = 11/279 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R RVG++DP RPI SFLF GPTGVGKTEL+ ALA FGS+ A++R+DMSEYMEKHT
Sbjct: 529 AIRRGRVGLKDPKRPIGSFLFLGPTGVGKTELSKALADAMFGSESALIRVDMSEYMEKHT 588
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG++ GGQL+E VR P+SVILFDEIEKAH DV N++LQ+LDDG +TD
Sbjct: 589 VSKIIGSPPGYVGYDEGGQLSEKVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDS 648
Query: 122 KGQTVDLKNTIIIMTSNIG-DSVIARESI---LGSDQ------MERGVAEELRRRFRPEF 171
G+ VD KNT+IIMTSN G ++++A +++ +GSD+ M+ V EE+RR F+PEF
Sbjct: 649 TGRVVDFKNTVIIMTSNAGAENIVAPKTLGFNVGSDEKQNHELMKGRVMEEVRRLFKPEF 708
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYER-LEAKNMELTVTHTFKKKLIEEGYNPSY 230
LNRIDE+IVF LNK + +IVDIM+K + R LE + + +T K+ +I++GY+ Y
Sbjct: 709 LNRIDEIIVFHVLNKSHMEKIVDIMIKNVNARTLEQMKISIELTEEAKQYIIDKGYDSKY 768
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
GARPLRRAI +ED +AE IL G I+ G+ V + C G
Sbjct: 769 GARPLRRAIQTEIEDPMAEKILEGTIKQGNRVLVTCKDG 807
>gi|91204090|emb|CAJ71743.1| strongly similar to ATP-dependent protease Clp (chain B)
[Candidatus Kuenenia stuttgartiensis]
Length = 864
Score = 316 bits (809), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 152/273 (55%), Positives = 202/273 (73%), Gaps = 5/273 (1%)
Query: 3 LERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTV 62
+ RAR G++DPNRPI +FLF GPTGVGKTEL ALA F +++AMVRIDMSE+ME+H+V
Sbjct: 590 IRRARAGLQDPNRPIGTFLFLGPTGVGKTELCKALAAFLFDNEDAMVRIDMSEFMEQHSV 649
Query: 63 SKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGK 122
++ G+PPGYVG+E GG+LTEA+R RP++V+LFDEIEKAHRDV NV+LQ+ DDGR+TDG
Sbjct: 650 ARLIGAPPGYVGYEEGGRLTEAIRRRPYAVVLFDEIEKAHRDVFNVLLQVFDDGRLTDGH 709
Query: 123 GQTVDLKNTIIIMTSNIGDSVIARESILG---SDQMERGVAEELRRRFRPEFLNRIDEVI 179
G+TVD KNTII+MTSNI I + + G ++++R V + L+ FRPEFLNRIDE I
Sbjct: 710 GRTVDFKNTIIVMTSNIASQWI--QDLTGPENEEELKREVKQALKETFRPEFLNRIDETI 767
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF L+K + +I DI L ++ +RL N++LTVT K+ LIEEGY+P +GARPL+R I
Sbjct: 768 VFHSLSKELIKQIADIQLNDLRKRLARNNLKLTVTDRVKETLIEEGYDPHFGARPLKRTI 827
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
+L+E+ L+ IL G G + +D G V
Sbjct: 828 QQLIENPLSMEILGGKFPDGSEIMVDMQDGKAV 860
>gi|403382836|ref|ZP_10924893.1| protein ClpC [Paenibacillus sp. JC66]
Length = 807
Score = 316 bits (809), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 150/278 (53%), Positives = 206/278 (74%), Gaps = 10/278 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RP+ SF+F GPTGVGKTELA ALA FG + A++RIDMSEYMEKH+
Sbjct: 523 AIRRARAGLKDPKRPMGSFIFLGPTGVGKTELARALAESMFGDENAIIRIDMSEYMEKHS 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ G+PPGYVG++ GGQLTE VR +P+SV+L DEIEKAH +V N++LQ+L+DGR+TD
Sbjct: 583 TSRLVGAPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDS 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
KG+TVD +NT+IIMTSN+G +I + S LG + M+ V EL++ FRPEF
Sbjct: 643 KGRTVDFRNTLIIMTSNVGADLIKKNSALGFTANLDAGHDYNNMKDKVMTELKKSFRPEF 702
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNRIDE+IVF L++ + EIV +M +E+ +RL+ + ++ +T + KK L +EGY+P+YG
Sbjct: 703 LNRIDELIVFHALDQEHINEIVTLMSEELRKRLKEQEVDFILTESAKKFLAKEGYDPAYG 762
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
ARPLRRAI + +ED L+E +L G I GD++T+D G
Sbjct: 763 ARPLRRAIQKHIEDRLSEELLKGNISKGDTLTIDEKEG 800
>gi|333922411|ref|YP_004495991.1| ATPase AAA-2 domain-containing protein [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|333747972|gb|AEF93079.1| ATPase AAA-2 domain protein [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 818
Score = 316 bits (809), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 153/276 (55%), Positives = 201/276 (72%), Gaps = 11/276 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RP+ SF+F GPTGVGKTELA ALA FG ++A+VRIDMSEYMEKH VS+
Sbjct: 531 RARAGLKDPKRPVGSFIFLGPTGVGKTELARALAEALFGDEDALVRIDMSEYMEKHAVSR 590
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG++ GGQLTEAVR +P+SV+L DEIEKAH DV N++LQ+L+DGR+TD KG+
Sbjct: 591 LVGAPPGYVGYDEGGQLTEAVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDAKGR 650
Query: 125 TVDLKNTIIIMTSNIGDSVI-----------ARESILGSDQMERGVAEELRRRFRPEFLN 173
TVD +NT+IIMTSN+G S I A ++ ++M+ V E L+R FRPEFLN
Sbjct: 651 TVDFRNTVIIMTSNVGLSTIKSVGRVGFAAQAEQNEAEYEKMKERVEEALKRTFRPEFLN 710
Query: 174 RIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGAR 233
RIDE IVF LN+ + +IV +MLKE+ +R+E + + T K+KL E GY+ YGAR
Sbjct: 711 RIDETIVFHPLNREHIKQIVGLMLKEVAKRMEEHEVYVEFTEAAKEKLAEIGYSEEYGAR 770
Query: 234 PLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
PLRR I R +ED L+E ++ G + GD V +D ++G
Sbjct: 771 PLRREIQRKVEDRLSEELIKGTFKKGDKVVIDVENG 806
>gi|403743591|ref|ZP_10953143.1| ATPase AAA-2 domain-containing protein [Alicyclobacillus hesperidum
URH17-3-68]
gi|403122621|gb|EJY56826.1| ATPase AAA-2 domain-containing protein [Alicyclobacillus hesperidum
URH17-3-68]
Length = 810
Score = 316 bits (809), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 150/274 (54%), Positives = 204/274 (74%), Gaps = 8/274 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++A++RIDMSE+ME+HT
Sbjct: 521 AIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDEDALIRIDMSEFMERHT 580
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG+E GGQLTE VR +P+SV+L DEIEKAH +V N++LQ+LDDGR+TDG
Sbjct: 581 TSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLDDGRLTDG 640
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQ--------MERGVAEELRRRFRPEFLN 173
KG+TVD +NT+IIMTSN+G + + +G + M+ V ++L++ FRPEFLN
Sbjct: 641 KGRTVDFRNTVIIMTSNVGAEELRKGGSVGFKRDESSRYLDMKDKVMQDLKKTFRPEFLN 700
Query: 174 RIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGAR 233
RIDE+IVF L++ + IVD+M+ + RL+ + +E T+T KK L +EG++P YGAR
Sbjct: 701 RIDEIIVFHSLDEDHIGRIVDMMVHNLQRRLKEQEIEFTLTDEAKKFLSKEGFDPQYGAR 760
Query: 234 PLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
PL+RAI R +ED L+E +L+G I+ GDSV + D
Sbjct: 761 PLQRAIVRHIEDRLSEALLSGQIKKGDSVVLGLD 794
>gi|46199425|ref|YP_005092.1| endopeptidase Clp ATP-binding chain B, clpB [Thermus thermophilus
HB27]
gi|54035771|sp|Q72IK9.1|CLPB_THET2 RecName: Full=Chaperone protein ClpB
gi|46197050|gb|AAS81465.1| endopeptidase clp ATP-binding chain B, clpB [Thermus thermophilus
HB27]
Length = 854
Score = 316 bits (809), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 157/274 (57%), Positives = 197/274 (71%), Gaps = 4/274 (1%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DPNRPI SFLF GPTGVGKTELA LA F ++EAM+RIDM+EYMEKH
Sbjct: 573 AIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHA 632
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEAVR RP+SVILFDEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 633 VSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDS 692
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMER---GVAEELRRRFRPEFLNRIDEV 178
G+TVD +NT+II+TSN+G +I E + ER V + L++ FRPEFLNR+DE+
Sbjct: 693 HGRTVDFRNTVIILTSNLGSPLIL-EGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEI 751
Query: 179 IVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRA 238
+VFR L K Q+ +IV+I L + RL K + L +T K L E GY+P +GARPLRR
Sbjct: 752 VVFRPLTKEQIRQIVEIQLSYLRARLAEKRISLELTEAAKDFLAERGYDPVFGARPLRRV 811
Query: 239 IGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
I R LE LA+ IL G ++ GD V +D G V
Sbjct: 812 IQRELETPLAQKILAGEVKEGDRVQVDVGPAGLV 845
>gi|308071007|ref|YP_003872612.1| Negative regulator of genetic competence clpC/mecB [Paenibacillus
polymyxa E681]
gi|305860286|gb|ADM72074.1| Negative regulator of genetic competence clpC/mecB [Paenibacillus
polymyxa E681]
Length = 814
Score = 316 bits (809), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 151/279 (54%), Positives = 203/279 (72%), Gaps = 10/279 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RP+ SF+F GPTGVGKTELA ALA FG + A++RIDMSEYMEKH+
Sbjct: 523 AIRRARAGLKDPKRPMGSFIFLGPTGVGKTELARALAESMFGDENAVIRIDMSEYMEKHS 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ G+PPGYVG+E GGQLTE VR +P+SV+L DEIEKAH +V N++LQ+L+DGR+TD
Sbjct: 583 TSRLVGAPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDS 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
KG+ VD +NT+II+TSN+G I R S LG D M+ V +EL++ FRPEF
Sbjct: 643 KGRVVDFRNTLIILTSNVGAQAIKRNSTLGFTAVVDAGADYDNMKGKVMDELKKSFRPEF 702
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNRIDE+IVF L + + EIV +M +E+ +RL ++ +T KK L +EG++P+YG
Sbjct: 703 LNRIDEIIVFHSLEEKHIAEIVSLMSEELRKRLNEYEVDFELTDNAKKFLAKEGFDPAYG 762
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGG 270
ARPLRRAI + +ED L+E +LTG I GDS+ +D ++G
Sbjct: 763 ARPLRRAIQKHIEDRLSEELLTGNITKGDSLFIDEENGA 801
>gi|254431585|ref|ZP_05045288.1| ATP-dependent chaperone ClpB [Cyanobium sp. PCC 7001]
gi|197626038|gb|EDY38597.1| ATP-dependent chaperone ClpB [Cyanobium sp. PCC 7001]
Length = 883
Score = 316 bits (809), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 156/275 (56%), Positives = 197/275 (71%), Gaps = 8/275 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRPI+SFLF GPTGVGKTEL+ ALA + F S EAMVRIDMSEYMEKH
Sbjct: 589 AIQRSRAGLSDPNRPIASFLFLGPTGVGKTELSKALAAQLFDSDEAMVRIDMSEYMEKHA 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEAVR RP++VILFDE+EKAH DV NVMLQ+LDDGRVTDG
Sbjct: 649 VSRLIGAPPGYVGYEEGGQLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDG 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD-----QMERGVAEELRRRFRPEFLNRID 176
+G+TVD NT++I+TSNIG S I L D +ME+ V + LR FRPEFLNR+D
Sbjct: 709 QGRTVDFTNTVLILTSNIGSSSILD---LAGDPARHGEMEKRVNDALRAHFRPEFLNRLD 765
Query: 177 EVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLR 236
E I+F L + +L EIV++ +K + RL+ + + L + L GY+P YGARPL+
Sbjct: 766 ETIIFHSLKQEELREIVELQVKRLERRLDDRKLGLALNADALDWLAGVGYDPVYGARPLK 825
Query: 237 RAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGN 271
RAI R LE +A+ IL G G ++T+D N
Sbjct: 826 RAIQRELETPIAKAILAGEFTPGHTITVDVVEASN 860
>gi|38492937|pdb|1QVR|A Chain A, Crystal Structure Analysis Of Clpb
gi|38492938|pdb|1QVR|B Chain B, Crystal Structure Analysis Of Clpb
gi|38492939|pdb|1QVR|C Chain C, Crystal Structure Analysis Of Clpb
gi|5231279|dbj|BAA81745.1| ClpB [Thermus thermophilus HB8]
gi|8051691|dbj|BAA96085.1| ClpB [Thermus thermophilus HB8]
Length = 854
Score = 316 bits (809), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 157/274 (57%), Positives = 197/274 (71%), Gaps = 4/274 (1%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DPNRPI SFLF GPTGVGKTELA LA F ++EAM+RIDM+EYMEKH
Sbjct: 573 AIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHA 632
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEAVR RP+SVILFDEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 633 VSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDS 692
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMER---GVAEELRRRFRPEFLNRIDEV 178
G+TVD +NT+II+TSN+G +I E + ER V + L++ FRPEFLNR+DE+
Sbjct: 693 HGRTVDFRNTVIILTSNLGSPLIL-EGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEI 751
Query: 179 IVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRA 238
+VFR L K Q+ +IV+I L + RL K + L +T K L E GY+P +GARPLRR
Sbjct: 752 VVFRPLTKEQIRQIVEIQLSYLRARLAEKRISLELTEAAKDFLAERGYDPVFGARPLRRV 811
Query: 239 IGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
I R LE LA+ IL G ++ GD V +D G V
Sbjct: 812 IQRELETPLAQKILAGEVKEGDRVQVDVGPAGLV 845
>gi|418286169|ref|ZP_12898820.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21209]
gi|418924752|ref|ZP_13478655.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG2018]
gi|365167723|gb|EHM59100.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21209]
gi|377746047|gb|EHT70018.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG2018]
Length = 818
Score = 316 bits (809), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 153/272 (56%), Positives = 200/272 (73%), Gaps = 9/272 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG----SD-----QMERGVAEELRRRFRPEFLNRI 175
TVD +NTIIIMTSN+G + + G SD +++ + +EL+ FRPEFLNR+
Sbjct: 646 TVDFRNTIIIMTSNVGAQELQDQRFAGFGGSSDGQDYETIQKTMLKELKNSFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L K +L EIV +M+ ++ RL +N+ + VT K K+ EEGY+P YGARPL
Sbjct: 706 DDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RAI + +EDNL+E+IL G G VT+D D
Sbjct: 766 IRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 797
>gi|55981456|ref|YP_144753.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Thermus
thermophilus HB8]
gi|66774200|sp|Q9RA63.2|CLPB_THET8 RecName: Full=Chaperone protein ClpB
gi|55772869|dbj|BAD71310.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Thermus
thermophilus HB8]
Length = 854
Score = 316 bits (809), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 157/274 (57%), Positives = 197/274 (71%), Gaps = 4/274 (1%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DPNRPI SFLF GPTGVGKTELA LA F ++EAM+RIDM+EYMEKH
Sbjct: 573 AIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHA 632
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEAVR RP+SVILFDEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 633 VSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDS 692
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMER---GVAEELRRRFRPEFLNRIDEV 178
G+TVD +NT+II+TSN+G +I E + ER V + L++ FRPEFLNR+DE+
Sbjct: 693 HGRTVDFRNTVIILTSNLGSPLIL-EGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEI 751
Query: 179 IVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRA 238
+VFR L K Q+ +IV+I L + RL K + L +T K L E GY+P +GARPLRR
Sbjct: 752 VVFRPLTKEQIRQIVEIQLSYLRARLAEKRISLELTEAAKDFLAERGYDPVFGARPLRRV 811
Query: 239 IGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
I R LE LA+ IL G ++ GD V +D G V
Sbjct: 812 IQRELETPLAQKILAGEVKEGDRVQVDVGPAGLV 845
>gi|291534335|emb|CBL07447.1| ATPases with chaperone activity, ATP-binding subunit [Roseburia
intestinalis M50/1]
Length = 815
Score = 316 bits (809), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 155/267 (58%), Positives = 195/267 (73%), Gaps = 11/267 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R RVG++DP RPI SFLF GPTGVGKTE++ ALA FGS+++M+R+DMSEYMEKH+
Sbjct: 530 AVRRGRVGLKDPRRPIGSFLFLGPTGVGKTEISKALAEAVFGSEQSMIRVDMSEYMEKHS 589
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG E GGQL+E VR P+SVILFDEIEKAH DV N++LQ+LDDG +TD
Sbjct: 590 VSKMIGSPPGYVGHEEGGQLSEKVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDS 649
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
+G+ VD KNTIIIMTSN G I LG D+M+ V EE+RR F+PEF
Sbjct: 650 QGRKVDFKNTIIIMTSNAGAQAIIEPKKLGFAVSDDEKQNYDRMKNSVMEEVRRIFKPEF 709
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAK-NMELTVTHTFKKKLIEEGYNPSY 230
LNRIDE IVFR LNK + +IV +MLKE+ +R E + + LTV + KK ++++ Y+P Y
Sbjct: 710 LNRIDETIVFRALNKDDMKQIVALMLKELTDRCEKQMGIHLTVRDSVKKHIVDKAYDPKY 769
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQ 257
GARPLRR I +ED LAE IL+G ++
Sbjct: 770 GARPLRRQIQNDIEDELAEEILSGKVK 796
>gi|386360004|ref|YP_006058249.1| ATP-dependent chaperone ClpB [Thermus thermophilus JL-18]
gi|383509031|gb|AFH38463.1| ATP-dependent chaperone ClpB [Thermus thermophilus JL-18]
Length = 854
Score = 316 bits (809), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 157/274 (57%), Positives = 197/274 (71%), Gaps = 4/274 (1%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DPNRPI SFLF GPTGVGKTELA LA F ++EAM+RIDM+EYMEKH
Sbjct: 573 AIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHA 632
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEAVR RP+SVILFDEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 633 VSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDS 692
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMER---GVAEELRRRFRPEFLNRIDEV 178
G+TVD +NT+II+TSN+G +I E + ER V + L++ FRPEFLNR+DE+
Sbjct: 693 HGRTVDFRNTVIILTSNLGSPLIL-EGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEI 751
Query: 179 IVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRA 238
+VFR L K Q+ +IV+I L + RL K + L +T K L E GY+P +GARPLRR
Sbjct: 752 VVFRPLTKEQIRQIVEIQLSYLRARLAEKRISLELTEAAKDFLAERGYDPVFGARPLRRV 811
Query: 239 IGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
I R LE LA+ IL G ++ GD V +D G V
Sbjct: 812 IQRELETPLAQKILAGEVKEGDRVQVDVGPAGLV 845
>gi|310644235|ref|YP_003948994.1| ATPase AAA [Paenibacillus polymyxa SC2]
gi|309249186|gb|ADO58753.1| ATPase AAA-2 domain-containing protein [Paenibacillus polymyxa SC2]
gi|392304928|emb|CCI71291.1| ATP-dependent Clp protease ATP-binding subunit clpC [Paenibacillus
polymyxa M1]
Length = 814
Score = 315 bits (808), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 151/279 (54%), Positives = 202/279 (72%), Gaps = 10/279 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FG + A++RIDMSEYMEKH+
Sbjct: 523 AIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDENAVIRIDMSEYMEKHS 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ G+PPGYVG+E GGQLTE VR +P+SV+L DEIEKAH +V N++LQ+L+DGR+TD
Sbjct: 583 TSRLVGAPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDS 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
KG+ VD +NT+II+TSN+G I R S LG D M+ V +EL++ FRPEF
Sbjct: 643 KGRVVDFRNTLIILTSNVGAQAIKRNSTLGFTAVVDAGADYDNMKGKVMDELKKSFRPEF 702
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNRIDE+IVF L + + EIV +M +E+ +RL ++ +T K L +EG++P+YG
Sbjct: 703 LNRIDEIIVFHSLEEKHIAEIVSLMSEELRKRLNEYEVDFELTDKAKNFLAKEGFDPAYG 762
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGG 270
ARPLRRAI + +ED L+E +LTG I GDS+ +D ++G
Sbjct: 763 ARPLRRAIQKHIEDRLSEELLTGNISKGDSLYIDEENGA 801
>gi|119486634|ref|ZP_01620684.1| ATPase [Lyngbya sp. PCC 8106]
gi|119456251|gb|EAW37383.1| ATPase [Lyngbya sp. PCC 8106]
Length = 873
Score = 315 bits (808), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 153/271 (56%), Positives = 198/271 (73%), Gaps = 6/271 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DP RP++SF+F GPTGVGKTELA ALA F ++EAMVRIDMSEYMEKH
Sbjct: 589 AIQRSRAGLGDPKRPVASFIFLGPTGVGKTELAKALAAYLFDTEEAMVRIDMSEYMEKHA 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTEA+R RP++VILFDEIEKAH DV NVMLQ+LDDGRVTD
Sbjct: 649 VSRLIGAPPGYVGYDEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNVMLQILDDGRVTDA 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD----QMERGVAEELRRRFRPEFLNRIDE 177
+G TVD KN++IIMTSNIG I I+G D +M+ V E +R FRPEFLNRIDE
Sbjct: 709 QGHTVDFKNSVIIMTSNIGSQYIL--DIVGDDSRYEEMQGRVMETMRASFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+F L + QL +IV + ++ + ERL + M L +T L + G++P YGARPL+R
Sbjct: 767 IIIFHALQRQQLQKIVQLQIQHLVERLAERKMSLKLTDAAVSFLADVGFDPVYGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDS 268
AI R LE +A+ IL G GD++ +D ++
Sbjct: 827 AIQRELETQIAKGILRGEFNDGDTIFVDVEN 857
>gi|375310836|ref|ZP_09776101.1| ATPase aaa-2 domain-containing protein [Paenibacillus sp. Aloe-11]
gi|375077204|gb|EHS55447.1| ATPase aaa-2 domain-containing protein [Paenibacillus sp. Aloe-11]
Length = 814
Score = 315 bits (808), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 151/279 (54%), Positives = 202/279 (72%), Gaps = 10/279 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FG + A++RIDMSEYMEKH+
Sbjct: 523 AIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDENAVIRIDMSEYMEKHS 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ G+PPGYVG+E GGQLTE VR +P+SV+L DEIEKAH +V N++LQ+L+DGR+TD
Sbjct: 583 TSRLVGAPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDS 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
KG+ VD +NT+II+TSN+G I R S LG D M+ V +EL++ FRPEF
Sbjct: 643 KGRVVDFRNTLIILTSNVGAQAIKRNSTLGFTAVVDAGADYDNMKGKVMDELKKSFRPEF 702
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNRIDE+IVF L + + EIV +M +E+ +RL ++ +T K L +EG++P+YG
Sbjct: 703 LNRIDEIIVFHSLEEKHIAEIVSLMSEELRKRLNEYEVDFDLTDKAKTFLAKEGFDPAYG 762
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGG 270
ARPLRRAI + +ED L+E +LTG I GDS+ +D ++G
Sbjct: 763 ARPLRRAIQKHIEDRLSEELLTGNIAKGDSLLIDEENGA 801
>gi|163815425|ref|ZP_02206798.1| hypothetical protein COPEUT_01588 [Coprococcus eutactus ATCC 27759]
gi|158449062|gb|EDP26057.1| ATPase family associated with various cellular activities (AAA)
[Coprococcus eutactus ATCC 27759]
Length = 825
Score = 315 bits (808), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 159/293 (54%), Positives = 207/293 (70%), Gaps = 17/293 (5%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+RVG++DP RPI +FLF GPTGVGKTEL+ ALA FGS++A++R+DMSEYMEKH+
Sbjct: 525 AIKRSRVGLKDPRRPIGTFLFLGPTGVGKTELSKALADVVFGSEDALIRVDMSEYMEKHS 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGFE GGQL+E VR P+SVILFDEIEKAH DV N++LQ+LDDG +TD
Sbjct: 585 VSKLIGSPPGYVGFEEGGQLSEKVRTNPYSVILFDEIEKAHSDVFNILLQVLDDGHITDS 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
+G+ VD KNTIIIMTSN G I LG + M++ V +EL+R F+PEF
Sbjct: 645 QGRKVDFKNTIIIMTSNTGAQRIIDPKQLGFVTVQDDNKEHEDMKKNVMDELKRTFKPEF 704
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAK-NMELTVTHTFKKKLIEEGYNPSY 230
LNRID+ IVF L++ + +I +MLKE+ R++A+ ++EL T KK + E+GY+ Y
Sbjct: 705 LNRIDDTIVFHALSEKNVRDIAGLMLKELKNRVQAQMDIELKFTDNMKKYIFEKGYDKKY 764
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMT 283
GARPLRRAI +ED LAE IL G + G+ VT+ V + NGS+T
Sbjct: 765 GARPLRRAIQTYVEDELAEAILAGGVHKGEVVTV------TVKKIKGENGSVT 811
>gi|168701615|ref|ZP_02733892.1| ATPase AAA-2 domain protein [Gemmata obscuriglobus UQM 2246]
Length = 871
Score = 315 bits (808), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 152/275 (55%), Positives = 202/275 (73%), Gaps = 4/275 (1%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DPNRPI SF+F GPTGVGKTELA ALA F ++AM+RIDMSEY EKHTVS+
Sbjct: 588 RARSGLKDPNRPIGSFIFLGPTGVGKTELARALAEFLFDDEKAMIRIDMSEYQEKHTVSR 647
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG++ GGQLTEAVR RP+SV+LFDEIEKAH DV N +LQ+LDDGR+TDG+G+
Sbjct: 648 LVGAPPGYVGYDEGGQLTEAVRRRPYSVVLFDEIEKAHPDVFNTLLQVLDDGRLTDGQGR 707
Query: 125 TVDLKNTIIIMTSNIGDSVIA--RESILGS--DQMERGVAEELRRRFRPEFLNRIDEVIV 180
TVD KNTI+IMTSN+G I + + +G D+M V EELR+ FRPEFLNRIDE+IV
Sbjct: 708 TVDFKNTIVIMTSNVGSQRILQYKGTHIGEVYDRMRAAVMEELRKGFRPEFLNRIDEIIV 767
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L + L +I+++ L + +RL + + L +T K ++ GY+P+YGARPL+R I
Sbjct: 768 FHALTEADLTKIIEVQLGNLRKRLAERKIGLALTEGAKAHMVRVGYDPAYGARPLKRTIQ 827
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMY 275
+ +E LA ++L G + G SV +D D+ + + +
Sbjct: 828 KEVETPLARLLLKGEVADGGSVAVDYDAAHDALSF 862
>gi|87303275|ref|ZP_01086068.1| ATPase [Synechococcus sp. WH 5701]
gi|87282170|gb|EAQ74131.1| ATPase [Synechococcus sp. WH 5701]
Length = 875
Score = 315 bits (808), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 154/274 (56%), Positives = 198/274 (72%), Gaps = 8/274 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRPI+SFLF GPTGVGKTEL+ ALA + F S +AMVRIDMSEYMEKH
Sbjct: 587 AIQRSRAGLSDPNRPIASFLFLGPTGVGKTELSKALASQLFDSDDAMVRIDMSEYMEKHA 646
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEAVR RP++VILFDE+EKAH DV NVMLQ+LDDGRVTDG
Sbjct: 647 VSRLIGAPPGYVGYEEGGQLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDG 706
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD-----QMERGVAEELRRRFRPEFLNRID 176
+G+TVD NT++I+TSNIG S I L D +ME+ V E LR FRPEFLNR+D
Sbjct: 707 QGRTVDFTNTVLILTSNIGSSSILD---LAGDPARHGEMEKRVNEALRAHFRPEFLNRLD 763
Query: 177 EVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLR 236
E I+F L +L +IV++ ++ + +RLE + + L + L GY+P YGARPL+
Sbjct: 764 ETIIFHSLRAEELRQIVELQVQRLRQRLEDRKLGLDLDGAALDWLAGVGYDPVYGARPLK 823
Query: 237 RAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGG 270
RAI R LE +A+ IL G G ++ +D ++G
Sbjct: 824 RAIQRQLETPIAKAILAGQFPEGSTIAVDVETGA 857
>gi|418871544|ref|ZP_13425920.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-125]
gi|418949170|ref|ZP_13501429.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-157]
gi|375368097|gb|EHS72024.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-125]
gi|375369614|gb|EHS73487.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-157]
Length = 818
Score = 315 bits (807), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 153/272 (56%), Positives = 200/272 (73%), Gaps = 9/272 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDEDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG----SD-----QMERGVAEELRRRFRPEFLNRI 175
TVD +NTIIIMTSN+G + + G SD + + + +EL+ FRPEFLNR+
Sbjct: 646 TVDFRNTIIIMTSNVGAQELQDQRFAGFGGSSDGQDYETIRKTMLKELKNSFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L K +L EIV +M+ ++ RL +N+ + VT K K+ EEGY+P YGARPL
Sbjct: 706 DDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RAI + +EDNL+E+IL G G VT+D D
Sbjct: 766 IRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 797
>gi|283769680|ref|ZP_06342572.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus H19]
gi|283459827|gb|EFC06917.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus H19]
Length = 818
Score = 315 bits (807), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 153/272 (56%), Positives = 200/272 (73%), Gaps = 9/272 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG----SD-----QMERGVAEELRRRFRPEFLNRI 175
TVD +NTIIIMTSN+G + + G SD + + + +EL+ FRPEFLNR+
Sbjct: 646 TVDFRNTIIIMTSNVGAQELQDQRFAGFGGSSDGQDYETIRKTMLKELKNSFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L K +L EIV +M+ ++ RL +N+++ VT K K+ EEGY+P YGARPL
Sbjct: 706 DDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNIKIIVTDKAKDKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RAI + +EDNL+E+IL G G VT+D D
Sbjct: 766 IRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 797
>gi|404416854|ref|ZP_10998667.1| stress response-related Clp ATPase [Staphylococcus arlettae CVD059]
gi|403490742|gb|EJY96274.1| stress response-related Clp ATPase [Staphylococcus arlettae CVD059]
Length = 824
Score = 315 bits (807), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 151/272 (55%), Positives = 201/272 (73%), Gaps = 9/272 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+R+DMSE+MEKH VS+
Sbjct: 527 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEEDAMIRVDMSEFMEKHAVSR 586
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 587 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 646
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSDQMERG---------VAEELRRRFRPEFLNRI 175
VD +NT+IIMTSN+G + + G E G + +EL+ FRPEFLNR+
Sbjct: 647 RVDFRNTVIIMTSNVGAQELQDQKFAGFGGAEEGQDYETIRKTMLKELKNAFRPEFLNRV 706
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L+K +L EIV +M+ ++ ERL +++ ++VT T K+K+ EEGY+P YGARPL
Sbjct: 707 DDIIVFHKLDKDELKEIVTMMVNKLTERLSEQDISISVTDTAKEKIAEEGYDPEYGARPL 766
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RAI + +EDNL+E+IL G G V +D D
Sbjct: 767 IRAIQKTVEDNLSELILDGNKIEGKDVVIDHD 798
>gi|427701446|ref|YP_007044668.1| ATP-dependent chaperone ClpB [Cyanobium gracile PCC 6307]
gi|427344614|gb|AFY27327.1| ATP-dependent chaperone ClpB [Cyanobium gracile PCC 6307]
Length = 877
Score = 315 bits (807), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 154/271 (56%), Positives = 196/271 (72%), Gaps = 8/271 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRPI+SFLF GPTGVGKTEL+ ALA + F S+EAMVRIDMSEYMEKH
Sbjct: 587 AIQRSRAGLSDPNRPIASFLFLGPTGVGKTELSKALASQLFDSEEAMVRIDMSEYMEKHA 646
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEAVR RP++VILFDE+EKAH DV NVMLQ+LDDGRVTDG
Sbjct: 647 VSRLIGAPPGYVGYEEGGQLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDG 706
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD-----QMERGVAEELRRRFRPEFLNRID 176
+G+TVD NT++I+TSNIG + I L D +ME+ V E LR FRPEFLNR+D
Sbjct: 707 QGRTVDFTNTVLILTSNIGSASILD---LAGDPARHGEMEKRVNEALRGHFRPEFLNRLD 763
Query: 177 EVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLR 236
E I+F L +L +IV++ ++ + RLE + + L V L GY+P YGARPL+
Sbjct: 764 ESIIFHSLKAEELRQIVELQVQRLARRLEERKLALQVDGEALDWLAAVGYDPVYGARPLK 823
Query: 237 RAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RAI R LE +A+ IL G G ++ +D +
Sbjct: 824 RAIQRELETPIAKAILAGTFPAGSTIAVDVE 854
>gi|331092135|ref|ZP_08340965.1| hypothetical protein HMPREF9477_01608 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330401907|gb|EGG81481.1| hypothetical protein HMPREF9477_01608 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 817
Score = 315 bits (807), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 152/280 (54%), Positives = 206/280 (73%), Gaps = 11/280 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R RVG++DPNRPI SFLF GPTGVGKTEL+ LA FG++EA++R+DMSEYMEKH+
Sbjct: 524 AVKRGRVGLKDPNRPIGSFLFLGPTGVGKTELSKTLAEALFGNEEALIRVDMSEYMEKHS 583
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG ++GGQL+E VR P+SVILFDEIEKAH DV N++LQ+LDDG +TD
Sbjct: 584 VSKMIGSPPGYVGHDDGGQLSEKVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDS 643
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG--------SD--QMERGVAEELRRRFRPEF 171
+G+ VD KNT+IIMTSN G I LG SD +M+ V +E+++ F+PEF
Sbjct: 644 QGRKVDFKNTVIIMTSNAGAKAIVEPKKLGFVANEDPDSDYKKMKSNVMDEVKQLFKPEF 703
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAK-NMELTVTHTFKKKLIEEGYNPSY 230
LNRIDE+IVF LN+ Q+ +IV++M KE+ +R++ + N++L + + KK+++E+G + Y
Sbjct: 704 LNRIDEIIVFHALNREQMKKIVNLMCKELSDRVQKQLNIKLVIRDSVKKEIVEKGTDLKY 763
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGG 270
GARPLRRA+ +LED +A+ IL G IQ G V + G
Sbjct: 764 GARPLRRAMQNILEDKMADAILEGEIQAGTQVEVGMSKKG 803
>gi|392407856|ref|YP_006444464.1| chaperone ATPase [Anaerobaculum mobile DSM 13181]
gi|390620992|gb|AFM22139.1| ATPase with chaperone activity, ATP-binding subunit [Anaerobaculum
mobile DSM 13181]
Length = 829
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 147/275 (53%), Positives = 204/275 (74%), Gaps = 10/275 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SFLF GPTGVGKTEL+ ALA FG + +M+R+DMSE+ME+H
Sbjct: 529 AIRRARSGLKDPKRPIGSFLFLGPTGVGKTELSKALAEFLFGDENSMIRLDMSEFMERHE 588
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK G+PPGYVG+E GG+LTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TDG
Sbjct: 589 VSKLIGAPPGYVGYEEGGKLTEAVRRRPYAVVLFDEIEKAHPDVFNILLQILEDGRLTDG 648
Query: 122 KGQTVDLKNTIIIMTSNIGDS----------VIARESILGSDQMERGVAEELRRRFRPEF 171
+G+ VD KNT+IIMTSN+G + ES L + ++ + E +RR FRPEF
Sbjct: 649 QGRVVDFKNTVIIMTSNLGAQDLMKGPSIGFSVTSESGLDFEDAKKNILEAVRRTFRPEF 708
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
+NRIDE++VF+ L + +L++IVD+M+K++ +RL K + + VT K L+++GY P +G
Sbjct: 709 INRIDEIVVFKPLAEKELLQIVDLMIKDVAKRLAEKGLIIEVTDAAKNFLLKKGYEPKFG 768
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
ARPLRR I R +ED LA+I+L G I+ G+ + +D
Sbjct: 769 ARPLRRTIQRYIEDKLADILLEGKIKPGEVIKVDV 803
>gi|377564982|ref|ZP_09794290.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia sputi
NBRC 100414]
gi|377527870|dbj|GAB39455.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia sputi
NBRC 100414]
Length = 861
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 149/262 (56%), Positives = 196/262 (74%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G+ DPNRPI SFLF GPTGVGKTELA ALA FG ++ M+R DMSE+ EKH V++
Sbjct: 545 RARAGLSDPNRPIGSFLFLGPTGVGKTELAKALAAAVFGDEDRMIRFDMSEFQEKHNVAR 604
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+++ GQLT+ VR +P+SVILFDEIEKAH DV NV+LQLLDDGRVTDG+G+
Sbjct: 605 LVGAPPGYVGYDDAGQLTDKVRRQPYSVILFDEIEKAHPDVFNVLLQLLDDGRVTDGQGR 664
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVFRQL 184
TVD KNT++IMTSNIG +I +++ V + LR+RFRPEFLNRIDE +VF +L
Sbjct: 665 TVDFKNTLVIMTSNIGSDLILNAPDGDVEKVVPDVMDLLRQRFRPEFLNRIDETVVFDRL 724
Query: 185 NKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGRLLE 244
+K QL +IVD+ L L+++++ L VT K +L EEGY P +GARPLRR I + L+
Sbjct: 725 DKTQLRQIVDLTLDGTRRMLKSQSIGLDVTDAAKDQLAEEGYQPEFGARPLRRLIQKQLD 784
Query: 245 DNLAEIILTGYIQVGDSVTMDC 266
+ L+ ++L G ++ GD+V +D
Sbjct: 785 NELSNLVLKGSVEPGDTVVVDA 806
>gi|378549452|ref|ZP_09824668.1| hypothetical protein CCH26_05167 [Citricoccus sp. CH26A]
Length = 845
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 148/282 (52%), Positives = 207/282 (73%), Gaps = 10/282 (3%)
Query: 1 MTLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKH 60
+ R R G++DPNRP SF+F GPTGVGKTELA ALA FG ++A++ +DMSE+ EKH
Sbjct: 534 QAIRRTRAGLKDPNRPSGSFIFAGPTGVGKTELAKALAEFLFGDEDALITLDMSEFQEKH 593
Query: 61 TVSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTD 120
TVS+ FG+PPGYVG+E GGQLTE VR RP SV+LFDE+EKAH D+ N +LQ+L+DGR+TD
Sbjct: 594 TVSRLFGAPPGYVGYEEGGQLTEKVRRRPFSVVLFDEVEKAHADLFNSLLQILEDGRLTD 653
Query: 121 GKGQTVDLKNTIIIMTSNIGDSVIAR----------ESILGSDQMERGVAEELRRRFRPE 170
+G+ VD KNT+IIMT+N+G I++ ++ G D+M+ V EELR+ FRPE
Sbjct: 654 SQGRVVDFKNTVIIMTTNLGTKDISKGVMTGFQSAADTQTGYDRMKGKVQEELRQHFRPE 713
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNR+D+VIVF QL+K ++++IVD+ + + +RL+ +++ +T+T K+ L + GY+P++
Sbjct: 714 FLNRVDDVIVFPQLSKDEIVQIVDLFVARLQKRLDDQDLTITITKPAKEFLADRGYDPAF 773
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
GARPLRR I L+ED L+E IL G I G S+T+D + G
Sbjct: 774 GARPLRRTIQHLVEDQLSEKILFGEITPGSSITVDLEGEGEA 815
>gi|418282574|ref|ZP_12895339.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21202]
gi|365169575|gb|EHM60821.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21202]
Length = 818
Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 153/272 (56%), Positives = 199/272 (73%), Gaps = 9/272 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG----SD-----QMERGVAEELRRRFRPEFLNRI 175
TVD +NTIIIMTSN+G + + G SD + + + +EL+ FRPEFLNR+
Sbjct: 646 TVDFRNTIIIMTSNVGAQELQDQRFAGFGGSSDGQDYETIRKTMLKELKNSFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L K +L EIV +M+ ++ RL +N+ + VT K K+ EEGY+P YGARPL
Sbjct: 706 DDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RAI + +EDNL+E+IL G G VT+D D
Sbjct: 766 IRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 797
>gi|258422629|ref|ZP_05685535.1| endopeptidase [Staphylococcus aureus A9635]
gi|417890327|ref|ZP_12534404.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21200]
gi|418308157|ref|ZP_12919810.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21194]
gi|418559680|ref|ZP_13124215.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21252]
gi|418888425|ref|ZP_13442562.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1524]
gi|418993239|ref|ZP_13540878.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG290]
gi|257847201|gb|EEV71209.1| endopeptidase [Staphylococcus aureus A9635]
gi|341855054|gb|EGS95908.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21200]
gi|365241637|gb|EHM82381.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21194]
gi|371974523|gb|EHO91853.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21252]
gi|377747202|gb|EHT71168.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG290]
gi|377754877|gb|EHT78782.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1524]
Length = 818
Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 153/272 (56%), Positives = 199/272 (73%), Gaps = 9/272 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG----SD-----QMERGVAEELRRRFRPEFLNRI 175
TVD +NTIIIMTSN+G + + G SD + + + +EL+ FRPEFLNR+
Sbjct: 646 TVDFRNTIIIMTSNVGAQELQDQRFAGFGGSSDGQDYETIRKTMLKELKNSFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L K +L EIV +M+ ++ RL +N+ + VT K K+ EEGY+P YGARPL
Sbjct: 706 DDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RAI + +EDNL+E+IL G G VT+D D
Sbjct: 766 IRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 797
>gi|338813698|ref|ZP_08625791.1| clpc ATPase [Acetonema longum DSM 6540]
gi|337274331|gb|EGO62875.1| clpc ATPase [Acetonema longum DSM 6540]
Length = 811
Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 147/281 (52%), Positives = 206/281 (73%), Gaps = 10/281 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FG + AM+R+DMSEYMEKHT
Sbjct: 525 AVRRARSGLKDPKRPIGSFIFLGPTGVGKTELARALAEAMFGDENAMIRLDMSEYMEKHT 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ GSPPGYVG+E GGQLT+A+R +P+SV+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 585 VSRLVGSPPGYVGYEEGGQLTDAIRRKPYSVVLFDEIEKAHYDVFNILLQILEDGRLTDS 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARES-----ILGSDQMERGVA-----EELRRRFRPEF 171
KG+TVD KN +IIMTSN+G + +++ + GS + + A EE++R FRPEF
Sbjct: 645 KGRTVDFKNAVIIMTSNVGAKHLKKDAAAVGFLAGSSENDEKAAKSRVMEEVKRTFRPEF 704
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNR+DE+IVF L +L +I+D+MLK++ +RL + + V K+ +++EG++P +G
Sbjct: 705 LNRVDEMIVFSSLTSPELKQIIDLMLKDVAKRLSEYAIAVDVQDAAKEIIMKEGHDPDFG 764
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
ARPLRRAI +L+ED ++E++L + GD++ D G +
Sbjct: 765 ARPLRRAIQKLVEDPISEMLLRREVAAGDTILADVAEDGQL 805
>gi|262049567|ref|ZP_06022436.1| endopeptidase [Staphylococcus aureus D30]
gi|259162307|gb|EEW46880.1| endopeptidase [Staphylococcus aureus D30]
Length = 818
Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 153/272 (56%), Positives = 199/272 (73%), Gaps = 9/272 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG----SD-----QMERGVAEELRRRFRPEFLNRI 175
TVD +NTIIIMTSN+G + + G SD + + + +EL+ FRPEFLNR+
Sbjct: 646 TVDFRNTIIIMTSNVGAQELQDQRFAGFGGSSDGQDYETIRKTMLKELKNSFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L K +L EIV +M+ ++ RL +N+ + VT K K+ EEGY+P YGARPL
Sbjct: 706 DDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RAI + +EDNL+E+IL G G VT+D D
Sbjct: 766 IRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 797
>gi|397903987|ref|ZP_10504920.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Caloramator
australicus RC3]
gi|343178731|emb|CCC57819.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Caloramator
australicus RC3]
Length = 818
Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 150/268 (55%), Positives = 198/268 (73%), Gaps = 12/268 (4%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
GI+DP RPI SF+F GPTGVGKTEL+ ALA FG + AM+RIDMSEYMEKHTVS+ GS
Sbjct: 536 GIKDPKRPIGSFIFLGPTGVGKTELSKALAEAMFGDENAMIRIDMSEYMEKHTVSRLIGS 595
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG+E GGQLTE VR +P+SV+LFDEIEKAH DV N++LQ+L+DGR+TDGKG+TVD
Sbjct: 596 PPGYVGYEEGGQLTEKVRRKPYSVVLFDEIEKAHPDVFNILLQILEDGRLTDGKGKTVDF 655
Query: 129 KNTIIIMTSNIGDSVIARESILG------------SDQMERGVAEELRRRFRPEFLNRID 176
+NTI+IMTSN+G I ++ LG ++M++ V E+L++ FRPEFLNRID
Sbjct: 656 RNTIVIMTSNVGAQTIKKQQTLGFAATTEKEKEDSYEKMKQNVMEDLKKTFRPEFLNRID 715
Query: 177 EVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLR 236
E+IVF L + +I ++MLK + RL+ +E++ K L ++G++P+YGARPLR
Sbjct: 716 EIIVFHPLEDKDIEKIAELMLKSVINRLKDLEVEISYDEDVIKHLSKQGFDPTYGARPLR 775
Query: 237 RAIGRLLEDNLAEIILTGYIQVGDSVTM 264
RAI + +ED L+E +L G I+ GD V M
Sbjct: 776 RAITKAVEDKLSEEMLKGNIKRGDKVVM 803
>gi|82750232|ref|YP_415973.1| endopeptidase [Staphylococcus aureus RF122]
gi|282915846|ref|ZP_06323611.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus D139]
gi|122063322|sp|Q2YSD6.1|CLPC_STAAB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|82655763|emb|CAI80163.1| endopeptidase [Staphylococcus aureus RF122]
gi|282320142|gb|EFB50487.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus D139]
Length = 818
Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 153/272 (56%), Positives = 199/272 (73%), Gaps = 9/272 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG----SD-----QMERGVAEELRRRFRPEFLNRI 175
TVD +NTIIIMTSN+G + + G SD + + + +EL+ FRPEFLNR+
Sbjct: 646 TVDFRNTIIIMTSNVGAQELQDQRFAGFGGSSDGQDYETIRKTMLKELKNSFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L K +L EIV +M+ ++ RL +N+ + VT K K+ EEGY+P YGARPL
Sbjct: 706 DDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RAI + +EDNL+E+IL G G VT+D D
Sbjct: 766 IRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 797
>gi|156741186|ref|YP_001431315.1| ATPase [Roseiflexus castenholzii DSM 13941]
gi|156232514|gb|ABU57297.1| ATPase AAA-2 domain protein [Roseiflexus castenholzii DSM 13941]
Length = 825
Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 152/286 (53%), Positives = 201/286 (70%), Gaps = 10/286 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA F S++AM RIDMSE+ E+HT
Sbjct: 525 AIRRARSGLKDPRRPIGSFIFVGPTGVGKTELAKALAEFLFDSEDAMTRIDMSEFQERHT 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GQLTE++R RP+ V+LFDEIEKAH DV N +LQLLDDGR+TD
Sbjct: 585 VSRLIGAPPGYVGYEEAGQLTESIRRRPYQVVLFDEIEKAHPDVFNTLLQLLDDGRLTDA 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEE---------LRRRFRPEFL 172
+G TVD +NT+IIMTSN+G + R+ LG + AEE LR+ FRPEFL
Sbjct: 645 QGHTVDFRNTVIIMTSNVGTEHV-RQQNLGLVRTHDKSAEEAARERVLEALRQAFRPEFL 703
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE+IVF L + +L +IVD++ +E+ ERL + + L +T KK L+ EGYNP+YGA
Sbjct: 704 NRIDEIIVFHALTEQELQQIVDLLAREVDERLREQGLTLELTPAAKKVLVREGYNPAYGA 763
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHR 278
RPLRR + R++E L+ +L G + GD++ +D D + + R
Sbjct: 764 RPLRRTVQRMVETPLSRSLLRGTFKAGDTIIVDVDPQTGELTFTRR 809
>gi|15923515|ref|NP_371049.1| endopeptidase [Staphylococcus aureus subsp. aureus Mu50]
gi|15926202|ref|NP_373735.1| endopeptidase [Staphylococcus aureus subsp. aureus N315]
gi|49482754|ref|YP_039978.1| stress response-related Clp ATPase [Staphylococcus aureus subsp.
aureus MRSA252]
gi|49485389|ref|YP_042610.1| stress response-related Clp ATPase [Staphylococcus aureus subsp.
aureus MSSA476]
gi|87161024|ref|YP_493213.1| endopeptidase [Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|88194286|ref|YP_499078.1| endopeptidase [Staphylococcus aureus subsp. aureus NCTC 8325]
gi|148266984|ref|YP_001245927.1| ATPase [Staphylococcus aureus subsp. aureus JH9]
gi|150393031|ref|YP_001315706.1| ATPase [Staphylococcus aureus subsp. aureus JH1]
gi|151220699|ref|YP_001331521.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus aureus subsp. aureus str. Newman]
gi|156978853|ref|YP_001441112.1| endopeptidase [Staphylococcus aureus subsp. aureus Mu3]
gi|161508764|ref|YP_001574423.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221141039|ref|ZP_03565532.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
str. JKD6009]
gi|253731128|ref|ZP_04865293.1| ClpB ATPase [Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253732532|ref|ZP_04866697.1| ClpB ATPase [Staphylococcus aureus subsp. aureus TCH130]
gi|255005318|ref|ZP_05143919.2| endopeptidase [Staphylococcus aureus subsp. aureus Mu50-omega]
gi|257795377|ref|ZP_05644356.1| endopeptidase [Staphylococcus aureus A9781]
gi|258408936|ref|ZP_05681217.1| endopeptidase [Staphylococcus aureus A9763]
gi|258420427|ref|ZP_05683370.1| endopeptidase [Staphylococcus aureus A9719]
gi|258439347|ref|ZP_05690279.1| endopeptidase [Staphylococcus aureus A9299]
gi|258444087|ref|ZP_05692424.1| endopeptidase [Staphylococcus aureus A8115]
gi|258446355|ref|ZP_05694513.1| endopeptidase [Staphylococcus aureus A6300]
gi|258448448|ref|ZP_05696563.1| endopeptidase [Staphylococcus aureus A6224]
gi|258452743|ref|ZP_05700741.1| endopeptidase [Staphylococcus aureus A5948]
gi|258453804|ref|ZP_05701778.1| endopeptidase [Staphylococcus aureus A5937]
gi|269202147|ref|YP_003281416.1| ClpA-related protein [Staphylococcus aureus subsp. aureus ED98]
gi|282894957|ref|ZP_06303180.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus A8117]
gi|282903112|ref|ZP_06311003.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus C160]
gi|282904902|ref|ZP_06312760.1| endopeptidase [Staphylococcus aureus subsp. aureus Btn1260]
gi|282907852|ref|ZP_06315687.1| ATP-dependent chaperone ClpB [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282910165|ref|ZP_06317969.1| ATP-dependent chaperone ClpB [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282918312|ref|ZP_06326049.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus C427]
gi|282928860|ref|ZP_06336451.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus A10102]
gi|283957322|ref|ZP_06374775.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus A017934/97]
gi|284023534|ref|ZP_06377932.1| ClpA-related protein [Staphylococcus aureus subsp. aureus 132]
gi|294850300|ref|ZP_06791034.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus A9754]
gi|295406901|ref|ZP_06816704.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus A8819]
gi|295427062|ref|ZP_06819698.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus EMRSA16]
gi|297208762|ref|ZP_06925190.1| ClpC ATPase [Staphylococcus aureus subsp. aureus ATCC 51811]
gi|297246275|ref|ZP_06930124.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus A8796]
gi|297590586|ref|ZP_06949225.1| Clpc ATPase [Staphylococcus aureus subsp. aureus MN8]
gi|304381877|ref|ZP_07364524.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|379013806|ref|YP_005290042.1| ClpA-related protein [Staphylococcus aureus subsp. aureus VC40]
gi|379020295|ref|YP_005296957.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus aureus subsp. aureus M013]
gi|384549389|ref|YP_005738641.1| Clp protease ATP binding subunit [Staphylococcus aureus subsp.
aureus JKD6159]
gi|384861187|ref|YP_005743907.1| Clp protease ATP binding subunit [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|384863853|ref|YP_005749212.1| negative regulator of genetic competence clpC/mecB [Staphylococcus
aureus subsp. aureus ECT-R 2]
gi|384868552|ref|YP_005748748.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus TCH60]
gi|384869110|ref|YP_005751824.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus T0131]
gi|385780790|ref|YP_005756961.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus 11819-97]
gi|386728282|ref|YP_006194665.1| hemolysin [Staphylococcus aureus subsp. aureus 71193]
gi|386830168|ref|YP_006236822.1| putative stress response-related Clp ATPase [Staphylococcus aureus
subsp. aureus HO 5096 0412]
gi|387142214|ref|YP_005730607.1| putative stress response-related Clp ATPase [Staphylococcus aureus
subsp. aureus TW20]
gi|387149685|ref|YP_005741249.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB
[Staphylococcus aureus 04-02981]
gi|387601879|ref|YP_005733400.1| negative regulator of genetic competence ClpC/mecB [Staphylococcus
aureus subsp. aureus ST398]
gi|387779664|ref|YP_005754462.1| putative stress response-related Clp ATPase [Staphylococcus aureus
subsp. aureus LGA251]
gi|404477910|ref|YP_006709340.1| stress response-related Clp ATPase [Staphylococcus aureus
08BA02176]
gi|415684080|ref|ZP_11449235.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
CGS00]
gi|415688911|ref|ZP_11452426.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
CGS01]
gi|415693998|ref|ZP_11455603.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
CGS03]
gi|417648357|ref|ZP_12298183.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21189]
gi|417650784|ref|ZP_12300549.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21172]
gi|417654130|ref|ZP_12303857.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21193]
gi|417796780|ref|ZP_12443984.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21305]
gi|417798480|ref|ZP_12445646.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21310]
gi|417801347|ref|ZP_12448440.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21318]
gi|417889316|ref|ZP_12533407.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21195]
gi|417893562|ref|ZP_12537588.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21201]
gi|417895979|ref|ZP_12539955.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21235]
gi|417899762|ref|ZP_12543663.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21259]
gi|417902183|ref|ZP_12546052.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21266]
gi|418279368|ref|ZP_12892731.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21178]
gi|418310656|ref|ZP_12922192.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21331]
gi|418312992|ref|ZP_12924490.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21334]
gi|418315148|ref|ZP_12926612.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21340]
gi|418318082|ref|ZP_12929496.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21232]
gi|418320331|ref|ZP_12931692.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus VCU006]
gi|418423697|ref|ZP_12996844.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS1]
gi|418426641|ref|ZP_12999667.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS2]
gi|418429567|ref|ZP_13002498.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS3a]
gi|418432462|ref|ZP_13005262.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS4]
gi|418436176|ref|ZP_13007993.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS5]
gi|418439075|ref|ZP_13010796.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS6]
gi|418442055|ref|ZP_13013672.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS7]
gi|418445183|ref|ZP_13016674.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS8]
gi|418448123|ref|ZP_13019528.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS9]
gi|418450947|ref|ZP_13022289.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS10]
gi|418453964|ref|ZP_13025237.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS11a]
gi|418456868|ref|ZP_13028083.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS11b]
gi|418561558|ref|ZP_13126046.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21262]
gi|418566028|ref|ZP_13130417.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21264]
gi|418566752|ref|ZP_13131120.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21272]
gi|418570503|ref|ZP_13134771.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21283]
gi|418573446|ref|ZP_13137640.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21333]
gi|418581200|ref|ZP_13145283.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1605]
gi|418595404|ref|ZP_13159018.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21342]
gi|418599346|ref|ZP_13162835.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21343]
gi|418601623|ref|ZP_13165043.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21345]
gi|418639547|ref|ZP_13201792.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-3]
gi|418642050|ref|ZP_13204251.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-24]
gi|418643846|ref|ZP_13206001.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-55]
gi|418646212|ref|ZP_13208323.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-88]
gi|418651241|ref|ZP_13213249.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-91]
gi|418654853|ref|ZP_13216746.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-99]
gi|418656945|ref|ZP_13218729.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-105]
gi|418658745|ref|ZP_13220454.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-111]
gi|418662543|ref|ZP_13224087.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-122]
gi|418874542|ref|ZP_13428808.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC93]
gi|418877374|ref|ZP_13431613.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1165]
gi|418880231|ref|ZP_13434451.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1213]
gi|418883158|ref|ZP_13437358.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1769]
gi|418885818|ref|ZP_13439968.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1150]
gi|418891128|ref|ZP_13445245.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1176]
gi|418893984|ref|ZP_13448085.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1057]
gi|418896910|ref|ZP_13450983.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC341D]
gi|418899874|ref|ZP_13453933.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1214]
gi|418905107|ref|ZP_13459136.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC345D]
gi|418908279|ref|ZP_13462287.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG149]
gi|418913715|ref|ZP_13467688.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC340D]
gi|418916334|ref|ZP_13470297.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1267]
gi|418919339|ref|ZP_13473285.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC348]
gi|418922157|ref|ZP_13476074.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1233]
gi|418930554|ref|ZP_13484402.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1750]
gi|418933455|ref|ZP_13487279.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC128]
gi|418980365|ref|ZP_13528148.1| Negative regulator of genetic competence clpC/mecB [Staphylococcus
aureus subsp. aureus DR10]
gi|418981392|ref|ZP_13529107.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1242]
gi|418985025|ref|ZP_13532715.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1500]
gi|418990419|ref|ZP_13538080.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1096]
gi|419774829|ref|ZP_14300783.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus CO-23]
gi|419785934|ref|ZP_14311678.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-M]
gi|421149287|ref|ZP_15608945.1| endopeptidase [Staphylococcus aureus subsp. aureus str. Newbould
305]
gi|422744661|ref|ZP_16798616.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus MRSA177]
gi|422745104|ref|ZP_16799050.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus MRSA131]
gi|424775944|ref|ZP_18202931.1| hemolysin B [Staphylococcus aureus subsp. aureus CM05]
gi|424784378|ref|ZP_18211188.1| ATP-dependent Clp protease [Staphylococcus aureus CN79]
gi|440707559|ref|ZP_20888254.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21282]
gi|440733999|ref|ZP_20913612.1| endopeptidase [Staphylococcus aureus subsp. aureus DSM 20231]
gi|443637217|ref|ZP_21121302.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21236]
gi|443638292|ref|ZP_21122339.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21196]
gi|448741467|ref|ZP_21723431.1| endopeptidase [Staphylococcus aureus KT/314250]
gi|81649908|sp|Q6GBW3.1|CLPC_STAAS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|81651703|sp|Q6GJE4.1|CLPC_STAAR RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|81706177|sp|Q7A797.1|CLPC_STAAN RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|81782085|sp|Q99W78.1|CLPC_STAAM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|122063320|sp|Q2FJB5.1|CLPC_STAA3 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|122063321|sp|Q2G0P5.1|CLPC_STAA8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|122063323|sp|P0C281.1|CLPC_STAAC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|13700415|dbj|BAB41713.1| endopeptidase [Staphylococcus aureus subsp. aureus N315]
gi|14246293|dbj|BAB56687.1| endopeptidase [Staphylococcus aureus subsp. aureus Mu50]
gi|49240883|emb|CAG39550.1| putative stress response-related Clp ATPase [Staphylococcus aureus
subsp. aureus MRSA252]
gi|49243832|emb|CAG42257.1| putative stress response-related Clp ATPase [Staphylococcus aureus
subsp. aureus MSSA476]
gi|87126998|gb|ABD21512.1| endopeptidase [Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|87201844|gb|ABD29654.1| endopeptidase, putative [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|147740053|gb|ABQ48351.1| ATPase AAA-2 domain protein [Staphylococcus aureus subsp. aureus
JH9]
gi|149945483|gb|ABR51419.1| ATPase AAA-2 domain protein [Staphylococcus aureus subsp. aureus
JH1]
gi|150373499|dbj|BAF66759.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus aureus subsp. aureus str. Newman]
gi|156720988|dbj|BAF77405.1| endopeptidase [Staphylococcus aureus subsp. aureus Mu3]
gi|160367573|gb|ABX28544.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253725142|gb|EES93871.1| ClpB ATPase [Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253729461|gb|EES98190.1| ClpB ATPase [Staphylococcus aureus subsp. aureus TCH130]
gi|257789349|gb|EEV27689.1| endopeptidase [Staphylococcus aureus A9781]
gi|257840287|gb|EEV64750.1| endopeptidase [Staphylococcus aureus A9763]
gi|257843617|gb|EEV68023.1| endopeptidase [Staphylococcus aureus A9719]
gi|257847684|gb|EEV71683.1| endopeptidase [Staphylococcus aureus A9299]
gi|257850757|gb|EEV74702.1| endopeptidase [Staphylococcus aureus A8115]
gi|257854949|gb|EEV77894.1| endopeptidase [Staphylococcus aureus A6300]
gi|257858317|gb|EEV81204.1| endopeptidase [Staphylococcus aureus A6224]
gi|257859616|gb|EEV82466.1| endopeptidase [Staphylococcus aureus A5948]
gi|257864060|gb|EEV86814.1| endopeptidase [Staphylococcus aureus A5937]
gi|262074437|gb|ACY10410.1| ClpA-related protein [Staphylococcus aureus subsp. aureus ED98]
gi|269940097|emb|CBI48473.1| putative stress response-related Clp ATPase [Staphylococcus aureus
subsp. aureus TW20]
gi|282317446|gb|EFB47818.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus C427]
gi|282325557|gb|EFB55865.1| ATP-dependent chaperone ClpB [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282328236|gb|EFB58514.1| ATP-dependent chaperone ClpB [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282331727|gb|EFB61238.1| endopeptidase [Staphylococcus aureus subsp. aureus Btn1260]
gi|282589468|gb|EFB94557.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus A10102]
gi|282596067|gb|EFC01028.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus C160]
gi|282762639|gb|EFC02776.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus A8117]
gi|283469817|emb|CAQ49028.1| negative regulator of genetic competence ClpC/mecB [Staphylococcus
aureus subsp. aureus ST398]
gi|283790773|gb|EFC29588.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus A017934/97]
gi|285816224|gb|ADC36711.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB
[Staphylococcus aureus 04-02981]
gi|294822812|gb|EFG39247.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus A9754]
gi|294968132|gb|EFG44158.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus A8819]
gi|295128850|gb|EFG58480.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus EMRSA16]
gi|296886707|gb|EFH25612.1| ClpC ATPase [Staphylococcus aureus subsp. aureus ATCC 51811]
gi|297176873|gb|EFH36131.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus A8796]
gi|297576885|gb|EFH95600.1| Clpc ATPase [Staphylococcus aureus subsp. aureus MN8]
gi|302332238|gb|ADL22431.1| Clp protease ATP binding subunit [Staphylococcus aureus subsp.
aureus JKD6159]
gi|302750416|gb|ADL64593.1| Clp protease ATP binding subunit [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|304339663|gb|EFM05610.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|312439057|gb|ADQ78128.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus TCH60]
gi|312829020|emb|CBX33862.1| negative regulator of genetic competence clpC/mecB [Staphylococcus
aureus subsp. aureus ECT-R 2]
gi|315128816|gb|EFT84815.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
CGS03]
gi|315193888|gb|EFU24282.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
CGS00]
gi|315196665|gb|EFU27012.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
CGS01]
gi|320141611|gb|EFW33450.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus MRSA131]
gi|320141761|gb|EFW33589.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus MRSA177]
gi|329313245|gb|AEB87658.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus T0131]
gi|329727906|gb|EGG64355.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21172]
gi|329731020|gb|EGG67393.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21189]
gi|329731944|gb|EGG68300.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21193]
gi|334268166|gb|EGL86611.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21305]
gi|334275810|gb|EGL94085.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21310]
gi|334276873|gb|EGL95116.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21318]
gi|341841185|gb|EGS82648.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21235]
gi|341843778|gb|EGS84999.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21266]
gi|341844370|gb|EGS85587.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21259]
gi|341851726|gb|EGS92637.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21195]
gi|341854333|gb|EGS95204.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21201]
gi|344176766|emb|CCC87228.1| putative stress response-related Clp ATPase [Staphylococcus aureus
subsp. aureus LGA251]
gi|359829604|gb|AEV77582.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus aureus subsp. aureus M013]
gi|364521779|gb|AEW64529.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus 11819-97]
gi|365170702|gb|EHM61663.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21178]
gi|365227517|gb|EHM68711.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus VCU006]
gi|365236360|gb|EHM77256.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21331]
gi|365236933|gb|EHM77809.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21334]
gi|365243778|gb|EHM84446.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21340]
gi|365244323|gb|EHM84984.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21232]
gi|371971902|gb|EHO89294.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21264]
gi|371977415|gb|EHO94686.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21262]
gi|371981811|gb|EHO98973.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21333]
gi|371983497|gb|EHP00639.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21272]
gi|371984012|gb|EHP01140.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21283]
gi|374362503|gb|AEZ36608.1| ClpA-related protein [Staphylococcus aureus subsp. aureus VC40]
gi|374397453|gb|EHQ68663.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21343]
gi|374398042|gb|EHQ69240.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21345]
gi|374401543|gb|EHQ72609.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21342]
gi|375014250|gb|EHS07942.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-99]
gi|375017187|gb|EHS10809.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-3]
gi|375017827|gb|EHS11430.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-24]
gi|375026147|gb|EHS19533.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-91]
gi|375027272|gb|EHS20637.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-55]
gi|375031945|gb|EHS25205.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-105]
gi|375033412|gb|EHS26605.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-88]
gi|375036042|gb|EHS29129.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-122]
gi|375037645|gb|EHS30664.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-111]
gi|377696082|gb|EHT20438.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1165]
gi|377698332|gb|EHT22680.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1057]
gi|377704956|gb|EHT29264.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1214]
gi|377707212|gb|EHT31505.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1242]
gi|377708157|gb|EHT32448.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1500]
gi|377711984|gb|EHT36207.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1605]
gi|377716271|gb|EHT40454.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1769]
gi|377716421|gb|EHT40603.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1750]
gi|377722541|gb|EHT46666.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1096]
gi|377727116|gb|EHT51223.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1150]
gi|377732085|gb|EHT56136.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1176]
gi|377732669|gb|EHT56719.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1213]
gi|377735480|gb|EHT59510.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1233]
gi|377751686|gb|EHT75614.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1267]
gi|377755618|gb|EHT79516.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG149]
gi|377758321|gb|EHT82206.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC340D]
gi|377761689|gb|EHT85558.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC341D]
gi|377766647|gb|EHT90480.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC345D]
gi|377767304|gb|EHT91102.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC348]
gi|377771235|gb|EHT94989.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC128]
gi|377771882|gb|EHT95635.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC93]
gi|379991893|gb|EIA13355.1| Negative regulator of genetic competence clpC/mecB [Staphylococcus
aureus subsp. aureus DR10]
gi|383361743|gb|EID39109.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-M]
gi|383971330|gb|EID87408.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus CO-23]
gi|384229575|gb|AFH68822.1| Negative regulator of genetic competence clpC/mecB [Staphylococcus
aureus subsp. aureus 71193]
gi|385195560|emb|CCG15169.1| putative stress response-related Clp ATPase [Staphylococcus aureus
subsp. aureus HO 5096 0412]
gi|387720914|gb|EIK08805.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS3a]
gi|387721079|gb|EIK08966.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS2]
gi|387722489|gb|EIK10287.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS1]
gi|387727528|gb|EIK15041.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS4]
gi|387729536|gb|EIK16971.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS5]
gi|387731576|gb|EIK18858.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS6]
gi|387738379|gb|EIK25422.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS8]
gi|387739630|gb|EIK26626.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS9]
gi|387739792|gb|EIK26775.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS7]
gi|387746895|gb|EIK33615.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS10]
gi|387748305|gb|EIK34994.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS11a]
gi|387749110|gb|EIK35754.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS11b]
gi|394330204|gb|EJE56296.1| endopeptidase [Staphylococcus aureus subsp. aureus str. Newbould
305]
gi|402346723|gb|EJU81800.1| hemolysin B [Staphylococcus aureus subsp. aureus CM05]
gi|404439399|gb|AFR72592.1| putative stress response-related Clp ATPase [Staphylococcus aureus
08BA02176]
gi|408422956|emb|CCJ10367.1| Clp protease ATP binding subunit [Staphylococcus aureus subsp.
aureus ST228]
gi|408424944|emb|CCJ12331.1| Clp protease ATP binding subunit [Staphylococcus aureus subsp.
aureus ST228]
gi|408426933|emb|CCJ14296.1| Clp protease ATP binding subunit [Staphylococcus aureus subsp.
aureus ST228]
gi|408428921|emb|CCJ26086.1| Clp protease ATP binding subunit [Staphylococcus aureus subsp.
aureus ST228]
gi|408430909|emb|CCJ18224.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus ST228]
gi|408432903|emb|CCJ20188.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus ST228]
gi|408434892|emb|CCJ22152.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus ST228]
gi|408436877|emb|CCJ24120.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus ST228]
gi|421956977|gb|EKU09301.1| ATP-dependent Clp protease [Staphylococcus aureus CN79]
gi|436431894|gb|ELP29246.1| endopeptidase [Staphylococcus aureus subsp. aureus DSM 20231]
gi|436505881|gb|ELP41740.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21282]
gi|443406095|gb|ELS64680.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21236]
gi|443409729|gb|ELS68221.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21196]
gi|445547768|gb|ELY16030.1| endopeptidase [Staphylococcus aureus KT/314250]
Length = 818
Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 153/272 (56%), Positives = 199/272 (73%), Gaps = 9/272 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG----SD-----QMERGVAEELRRRFRPEFLNRI 175
TVD +NTIIIMTSN+G + + G SD + + + +EL+ FRPEFLNR+
Sbjct: 646 TVDFRNTIIIMTSNVGAQELQDQRFAGFGGSSDGQDYETIRKTMLKELKNSFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L K +L EIV +M+ ++ RL +N+ + VT K K+ EEGY+P YGARPL
Sbjct: 706 DDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RAI + +EDNL+E+IL G G VT+D D
Sbjct: 766 IRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 797
>gi|167998873|ref|XP_001752142.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696537|gb|EDQ82875.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 881
Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 156/291 (53%), Positives = 204/291 (70%), Gaps = 15/291 (5%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RARVG++DPNRPI++ LF GPTGVGKTEL ALA YFGS+E+M+R+DMSEYME+HT
Sbjct: 566 AVRRARVGLKDPNRPIAAMLFCGPTGVGKTELTKALAQHYFGSEESMIRLDMSEYMERHT 625
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GG LTEAVR RP +VIL DEIEKAH DV N++LQ+ +DG +TD
Sbjct: 626 VSKLVGSPPGYVGYGEGGILTEAVRRRPFTVILMDEIEKAHPDVFNMLLQIFEDGHLTDS 685
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR--ESILG-------------SDQMERGVAEELRRR 166
+G+ V KN +I+MTSNIG IA+ S +G Q++ V +EL+
Sbjct: 686 QGRKVSFKNVLIVMTSNIGSQQIAKGGSSRIGFTYHNPDEADGGKYSQLKELVMDELKGY 745
Query: 167 FRPEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGY 226
FRPE LNR+DEV+VFR L K Q+ IVDIML+E RL A+ + L ++ K + ++GY
Sbjct: 746 FRPELLNRLDEVVVFRSLEKSQVRAIVDIMLEETKTRLSARGLNLEISEAMVKLICDQGY 805
Query: 227 NPSYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRH 277
+ SYGARPLRRA+ L+EDNL+E +L G + GD+ +D D GN + R+
Sbjct: 806 DRSYGARPLRRAVMSLVEDNLSEALLQGEFKDGDTALIDIDETGNPKVLRY 856
>gi|418950315|ref|ZP_13502500.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-160]
gi|375377281|gb|EHS80761.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-160]
Length = 818
Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 153/272 (56%), Positives = 199/272 (73%), Gaps = 9/272 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG----SD-----QMERGVAEELRRRFRPEFLNRI 175
TVD +NTIIIMTSN+G + + G SD + + + +EL+ FRPEFLNR+
Sbjct: 646 TVDFRNTIIIMTSNVGAQELQDQRFAGFGGSSDGQDYETIRKTMLKELKNSFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L K +L EIV +M+ ++ RL +N+ + VT K K+ EEGY+P YGARPL
Sbjct: 706 DDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RAI + +EDNL+E+IL G G VT+D D
Sbjct: 766 IRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 797
>gi|257432644|ref|ZP_05609004.1| endopeptidase [Staphylococcus aureus subsp. aureus E1410]
gi|257282059|gb|EEV12194.1| endopeptidase [Staphylococcus aureus subsp. aureus E1410]
Length = 818
Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 153/272 (56%), Positives = 199/272 (73%), Gaps = 9/272 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG----SD-----QMERGVAEELRRRFRPEFLNRI 175
TVD +NTIIIMTSN+G + + G SD + + + +EL+ FRPEFLNR+
Sbjct: 646 TVDFRNTIIIMTSNVGAQELQDQRFAGFGGSSDGQDYETIRKTMLKELKNSFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L K +L EIV +M+ ++ RL +N+ + VT K K+ EEGY+P YGARPL
Sbjct: 706 DDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RAI + +EDNL+E+IL G G VT+D D
Sbjct: 766 IRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 797
>gi|390456410|ref|ZP_10241938.1| ATPase AAA [Paenibacillus peoriae KCTC 3763]
Length = 814
Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 150/279 (53%), Positives = 202/279 (72%), Gaps = 10/279 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FG + A++RIDMSEYMEKH+
Sbjct: 523 AIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDENAVIRIDMSEYMEKHS 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ G+PPGYVG+E GGQLTE VR +P+SV+L DEIEKAH +V N++LQ+L+DGR+TD
Sbjct: 583 TSRLVGAPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDS 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
KG+ VD +NT+II+TSN+G I R S LG D M+ V +EL++ FRPEF
Sbjct: 643 KGRVVDFRNTLIILTSNVGAQAIKRNSTLGFTAVVDAGADYDNMKGKVMDELKKSFRPEF 702
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNRIDE+IVF L + + EIV +M +E+ +RL ++ +T K L +EG++P+YG
Sbjct: 703 LNRIDEIIVFHSLEEKHIAEIVSLMSEELRKRLNEYEVDFELTDKAKTFLAKEGFDPAYG 762
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGG 270
ARPLRRAI + +ED L+E +L+G I GDS+ +D ++G
Sbjct: 763 ARPLRRAIQKHIEDRLSEELLSGNISKGDSLLIDEENGA 801
>gi|339006576|ref|ZP_08639151.1| negative regulator of genetic competence ClpC/MecB [Brevibacillus
laterosporus LMG 15441]
gi|421875241|ref|ZP_16306835.1| negative regulator of genetic competence ClpC/MecB [Brevibacillus
laterosporus GI-9]
gi|338775785|gb|EGP35313.1| negative regulator of genetic competence ClpC/MecB [Brevibacillus
laterosporus LMG 15441]
gi|372455709|emb|CCF16384.1| negative regulator of genetic competence ClpC/MecB [Brevibacillus
laterosporus GI-9]
Length = 820
Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 148/270 (54%), Positives = 201/270 (74%), Gaps = 9/270 (3%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTGVGKTELA A+A FG ++AM+R+DMSEYMEKHT ++ G+
Sbjct: 537 GLKDPKRPIGSFIFLGPTGVGKTELARAVAETLFGDEDAMIRVDMSEYMEKHTTARLVGA 596
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG++ GGQLTE VR +P+SVIL DEIEKAH DV N++LQ+LDDGR+TD KG+TVD
Sbjct: 597 PPGYVGYDEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDSKGRTVDF 656
Query: 129 KNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFLNRIDEVI 179
+NT++IMTSN+G S+I + S LG M+ V +EL+R FRPEFLNRIDE+I
Sbjct: 657 RNTVVIMTSNVGASMIKKNSSLGFTTNDSEKKYQDMKDKVMDELKRSFRPEFLNRIDEII 716
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF L + + +IV +M +++ +RL + ++ ++ KK L +EG++P+YGARPLRRAI
Sbjct: 717 VFHSLEQEHIEKIVTLMTEDLRKRLVEQEIDFKLSEEAKKILAKEGFDPAYGARPLRRAI 776
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
R +ED L+E +L G I GD+V +D + G
Sbjct: 777 QRNIEDRLSEELLKGTITKGDTVQIDAEDG 806
>gi|304315908|ref|YP_003851053.1| ATPase AAA [Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|302777410|gb|ADL67969.1| ATPase AAA-2 domain protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 810
Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 146/272 (53%), Positives = 205/272 (75%), Gaps = 11/272 (4%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTGVGKTEL+ ALA FG + A+VRIDMSEYMEK +VS+ GS
Sbjct: 532 GLKDPRRPIGSFIFLGPTGVGKTELSKALAEAMFGDESAIVRIDMSEYMEKFSVSRLIGS 591
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG+E GG+LTE +R +P+SVILFDEIEKAH DV N++LQ+LDDGR+TD KG+TVD
Sbjct: 592 PPGYVGYEEGGELTEKIRRKPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSKGRTVDF 651
Query: 129 KNTIIIMTSNIGDSVIARESILG-----------SDQMERGVAEELRRRFRPEFLNRIDE 177
KNT+IIMTSN+G +I +++ LG ++M+ + +EL++ FRPEFLNRID+
Sbjct: 652 KNTLIIMTSNVGAQLIKKQTTLGFMPEGEENKASYEKMKENILDELKKSFRPEFLNRIDD 711
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+IVFRQL + + +I D+M+ ++ +RL+ N+ L T K++L++EGY+ +YGARPLRR
Sbjct: 712 IIVFRQLTQDDIRKITDLMIADLNKRLKDNNISLEFTDDAKEELLKEGYDVTYGARPLRR 771
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
AI +++E L+E++L G ++ GD + + G
Sbjct: 772 AIQKVVESELSELMLKGEVKSGDKILVKLKDG 803
>gi|220930935|ref|YP_002507843.1| ATPase AAA-2 domain-containing protein [Halothermothrix orenii H
168]
gi|219992245|gb|ACL68848.1| ATPase AAA-2 domain protein [Halothermothrix orenii H 168]
Length = 806
Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 153/282 (54%), Positives = 202/282 (71%), Gaps = 10/282 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA F +E MVRIDMSEYMEKH
Sbjct: 523 AVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEAMFNDEETMVRIDMSEYMEKHA 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ GSPPGYVG E GGQLTE +R RP+SV+LFDEIEKAH DV N++LQ+L+DG +TD
Sbjct: 583 VSRLVGSPPGYVGHEEGGQLTEPIRRRPYSVVLFDEIEKAHPDVFNILLQILEDGHLTDT 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
G+ VD KNT++IMTSN+G + I ++S LG + M+ + +LRR FRPEF
Sbjct: 643 HGRRVDFKNTVVIMTSNVGANFIEKQSRLGFKAGNDEKQNYEDMKDKLMSDLRRTFRPEF 702
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNR+DE+IVF LN+ + +IVD+ML ++ +RLE K +++ VT K L E+G++ +G
Sbjct: 703 LNRVDEIIVFHALNRDHIKQIVDLMLDDVKKRLEDKEIDIEVTEGAKHVLAEKGFDSEFG 762
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
ARPLRR I R++E+ L+E IL G ++ GD V +D G V+
Sbjct: 763 ARPLRRTIQRMVENPLSEKILEGKVKEGDKVVVDEQDGKVVV 804
>gi|282924437|ref|ZP_06332109.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus A9765]
gi|418911193|ref|ZP_13465176.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG547]
gi|418927840|ref|ZP_13481726.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1612]
gi|282592848|gb|EFB97852.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus A9765]
gi|377724571|gb|EHT48686.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG547]
gi|377737752|gb|EHT61761.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1612]
Length = 818
Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 153/272 (56%), Positives = 199/272 (73%), Gaps = 9/272 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG----SD-----QMERGVAEELRRRFRPEFLNRI 175
TVD +NTIIIMTSN+G + + G SD + + + +EL+ FRPEFLNR+
Sbjct: 646 TVDFRNTIIIMTSNVGAQELQDQRFAGFGGSSDGQDYETIRKTMLKELKNSFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L K +L EIV +M+ ++ RL +N+ + VT K K+ EEGY+P YGARPL
Sbjct: 706 DDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RAI + +EDNL+E+IL G G VT+D D
Sbjct: 766 IRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 797
>gi|257424638|ref|ZP_05601065.1| endopeptidase [Staphylococcus aureus subsp. aureus 55/2053]
gi|257427306|ref|ZP_05603705.1| endopeptidase [Staphylococcus aureus subsp. aureus 65-1322]
gi|257429942|ref|ZP_05606326.1| endopeptidase [Staphylococcus aureus subsp. aureus 68-397]
gi|257435548|ref|ZP_05611596.1| ATPase AAA-2 domain-containing protein [Staphylococcus aureus
subsp. aureus M876]
gi|282913357|ref|ZP_06321146.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus M899]
gi|282923274|ref|ZP_06330954.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus C101]
gi|293500403|ref|ZP_06666254.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus 58-424]
gi|293509348|ref|ZP_06668059.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus M809]
gi|293523935|ref|ZP_06670622.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus M1015]
gi|257272208|gb|EEV04331.1| endopeptidase [Staphylococcus aureus subsp. aureus 55/2053]
gi|257275499|gb|EEV06972.1| endopeptidase [Staphylococcus aureus subsp. aureus 65-1322]
gi|257279139|gb|EEV09740.1| endopeptidase [Staphylococcus aureus subsp. aureus 68-397]
gi|257284739|gb|EEV14858.1| ATPase AAA-2 domain-containing protein [Staphylococcus aureus
subsp. aureus M876]
gi|282314142|gb|EFB44532.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus C101]
gi|282322389|gb|EFB52711.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus M899]
gi|290920898|gb|EFD97959.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus M1015]
gi|291095408|gb|EFE25669.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus 58-424]
gi|291467445|gb|EFF09960.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus M809]
Length = 818
Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 153/272 (56%), Positives = 199/272 (73%), Gaps = 9/272 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG----SD-----QMERGVAEELRRRFRPEFLNRI 175
TVD +NTIIIMTSN+G + + G SD + + + +EL+ FRPEFLNR+
Sbjct: 646 TVDFRNTIIIMTSNVGAQELQDQRFAGFGGSSDGQDYETIRKTMLKELKNSFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L K +L EIV +M+ ++ RL +N+ + VT K K+ EEGY+P YGARPL
Sbjct: 706 DDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RAI + +EDNL+E+IL G G VT+D D
Sbjct: 766 IRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 797
>gi|418578415|ref|ZP_13142510.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1114]
gi|418902788|ref|ZP_13456829.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1770]
gi|377696442|gb|EHT20797.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1114]
gi|377741803|gb|EHT65788.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1770]
Length = 818
Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 153/272 (56%), Positives = 199/272 (73%), Gaps = 9/272 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG----SD-----QMERGVAEELRRRFRPEFLNRI 175
TVD +NTIIIMTSN+G + + G SD + + + +EL+ FRPEFLNR+
Sbjct: 646 TVDFRNTIIIMTSNVGAQELQDQRFAGFGGSSDGQDYETIRKTMLKELKNSFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L K +L EIV +M+ ++ RL +N+ + VT K K+ EEGY+P YGARPL
Sbjct: 706 DDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RAI + +EDNL+E+IL G G VT+D D
Sbjct: 766 IRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 797
>gi|433654066|ref|YP_007297774.1| ATPase with chaperone activity, ATP-binding subunit
[Thermoanaerobacterium thermosaccharolyticum M0795]
gi|433292255|gb|AGB18077.1| ATPase with chaperone activity, ATP-binding subunit
[Thermoanaerobacterium thermosaccharolyticum M0795]
Length = 810
Score = 314 bits (805), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 146/272 (53%), Positives = 205/272 (75%), Gaps = 11/272 (4%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTGVGKTEL+ ALA FG + A+VRIDMSEYMEK +VS+ GS
Sbjct: 532 GLKDPRRPIGSFIFLGPTGVGKTELSKALAEAMFGDESAIVRIDMSEYMEKFSVSRLIGS 591
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG+E GG+LTE +R +P+SVILFDEIEKAH DV N++LQ+LDDGR+TD KG+TVD
Sbjct: 592 PPGYVGYEEGGELTEKIRRKPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSKGRTVDF 651
Query: 129 KNTIIIMTSNIGDSVIARESILG-----------SDQMERGVAEELRRRFRPEFLNRIDE 177
KNT+IIMTSN+G +I +++ LG ++M+ + +EL++ FRPEFLNRID+
Sbjct: 652 KNTLIIMTSNVGAQLIKKQTTLGFMPEGEENKASYEKMKENILDELKKSFRPEFLNRIDD 711
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+IVFRQL + + +I D+M+ ++ +RL+ N+ L T K++L++EGY+ +YGARPLRR
Sbjct: 712 IIVFRQLTQDDIRKITDLMIADLNKRLKDNNISLEFTDDAKEELLKEGYDVTYGARPLRR 771
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
AI +++E L+E++L G ++ GD + + G
Sbjct: 772 AIQKVVESELSELMLKGEVKSGDKILVKLKDG 803
>gi|108803150|ref|YP_643087.1| ATPase [Rubrobacter xylanophilus DSM 9941]
gi|108764393|gb|ABG03275.1| ATPase AAA-2 [Rubrobacter xylanophilus DSM 9941]
Length = 837
Score = 314 bits (805), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 153/285 (53%), Positives = 202/285 (70%), Gaps = 10/285 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR GI+DP RP+ SF+F GPTGVGKTELA LA FG +EAMVRIDMSEY EKHT
Sbjct: 551 AIRRARAGIKDPRRPVGSFIFLGPTGVGKTELARTLAEYLFGEEEAMVRIDMSEYQEKHT 610
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GQLTE +R RP+SV+LFDEIEKAH D+ N +LQ+LDDGR+TD
Sbjct: 611 VSRLVGAPPGYVGYEEAGQLTEQIRRRPYSVVLFDEIEKAHPDIFNTLLQILDDGRLTDA 670
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD--------QMERGVAEELRRRFRPEFLN 173
+G+TVD +N +IIMTSN+G + E G +MER L + FRPEFLN
Sbjct: 671 QGRTVDFRNAVIIMTSNVGSQHLVSERQFGFTAREGVDFREMERRARNALEQTFRPEFLN 730
Query: 174 RIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGAR 233
R+DE+IVFR L+K +M+IVDIML+ + + LE++ + + VT ++ L EEGY+P +GAR
Sbjct: 731 RVDEIIVFRPLSKEDVMQIVDIMLRRLNKHLESQRISVEVTPEAREFLAEEGYDPKFGAR 790
Query: 234 PLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHR 278
PL RAI R +E+ L+ I+ G GD+V +D D G+ + +R +
Sbjct: 791 PLSRAIRRHIENPLSSSIIEGEFSPGDTVVVDRD--GDRLTFRAK 833
>gi|448744005|ref|ZP_21725910.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus KT/Y21]
gi|445562744|gb|ELY18910.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus KT/Y21]
Length = 818
Score = 314 bits (805), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 153/272 (56%), Positives = 199/272 (73%), Gaps = 9/272 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG----SD-----QMERGVAEELRRRFRPEFLNRI 175
TVD +NTIIIMTSN+G + + G SD + + + +EL+ FRPEFLNR+
Sbjct: 646 TVDFRNTIIIMTSNVGAQELQDQRFAGFGGSSDGQDYETIRKTMLKELKNSFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L K +L EIV +M+ ++ RL +N+ + VT K K+ EEGY+P YGARPL
Sbjct: 706 DDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RAI + +EDNL+E+IL G G VT+D D
Sbjct: 766 IRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 797
>gi|296275770|ref|ZP_06858277.1| ClpA-related protein [Staphylococcus aureus subsp. aureus MR1]
Length = 567
Score = 314 bits (805), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 153/272 (56%), Positives = 199/272 (73%), Gaps = 9/272 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +AM+R+DMSE+MEKH VS+
Sbjct: 275 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDDAMIRVDMSEFMEKHAVSR 334
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 335 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 394
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG----SD-----QMERGVAEELRRRFRPEFLNRI 175
TVD +NTIIIMTSN+G + + G SD + + + +EL+ FRPEFLNR+
Sbjct: 395 TVDFRNTIIIMTSNVGAQELQDQRFAGFGGSSDGQDYETIRKTMLKELKNSFRPEFLNRV 454
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L K +L EIV +M+ ++ RL +N+ + VT K K+ EEGY+P YGARPL
Sbjct: 455 DDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPL 514
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RAI + +EDNL+E+IL G G VT+D D
Sbjct: 515 IRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 546
>gi|441510815|ref|ZP_20992716.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
aichiensis NBRC 108223]
gi|441445051|dbj|GAC50677.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
aichiensis NBRC 108223]
Length = 854
Score = 314 bits (805), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 149/262 (56%), Positives = 196/262 (74%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G+ DPNRPI SFLF GPTGVGKTELA ALA FG ++ M+R DMSE+ EKH V++
Sbjct: 544 RARAGLSDPNRPIGSFLFLGPTGVGKTELAKALAAAVFGDEDRMIRFDMSEFQEKHNVAR 603
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+++ GQLT+ VR +P+SVILFDEIEKAH DV NV+LQLLDDGRVTDG+G+
Sbjct: 604 LVGAPPGYVGYDDAGQLTDKVRRQPYSVILFDEIEKAHPDVFNVLLQLLDDGRVTDGQGR 663
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVFRQL 184
TVD KNT++IMTSNIG +I +++ V + LR+RFRPEFLNRIDE +VF +L
Sbjct: 664 TVDFKNTLVIMTSNIGSDLILNAPDGDVEKVVPDVMDLLRQRFRPEFLNRIDETVVFDRL 723
Query: 185 NKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGRLLE 244
+K QL +IVD+ L L+++++ L VT K +L EEGY P +GARPLRR I + L+
Sbjct: 724 DKAQLRQIVDLTLDGTRRMLKSQSIGLEVTDAAKDQLAEEGYQPEFGARPLRRLIQKQLD 783
Query: 245 DNLAEIILTGYIQVGDSVTMDC 266
+ L+ ++L G ++ GD+V +D
Sbjct: 784 NELSNLVLKGAVEPGDTVVVDA 805
>gi|312127146|ref|YP_003992020.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
hydrothermalis 108]
gi|311777165|gb|ADQ06651.1| ATPase AAA-2 domain protein [Caldicellulosiruptor hydrothermalis
108]
Length = 829
Score = 314 bits (805), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 153/293 (52%), Positives = 208/293 (70%), Gaps = 11/293 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R RVG++DP RPI SF+F GPTGVGKTELA ALA FG+++AM+RIDMSEYMEK
Sbjct: 530 AIRRGRVGLKDPKRPIGSFIFLGPTGVGKTELARALAEALFGTEDAMIRIDMSEYMEKFN 589
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+E GGQLTE VR RP+SV+LFDEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 590 VSKLIGSPPGYVGYEEGGQLTEKVRRRPYSVVLFDEIEKAHPDVFNLLLQILDDGRLTDS 649
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG-----------SDQMERGVAEELRRRFRPE 170
+G+TV +NT+IIMTSNIG ++I LG +Q++ V EL++ FRPE
Sbjct: 650 QGRTVSFRNTVIIMTSNIGANLITNPKKLGFSTSEDEKQRTYEQIKENVMGELKKTFRPE 709
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNRIDE+IVF L++ + +IV+IMLK + ER++A T + + + ++G++P +
Sbjct: 710 FLNRIDEIIVFHPLDEDDVKKIVEIMLKNLQERIKASEYYAEFTTSLVEAIAKKGFDPVF 769
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMT 283
GARPL+RAI ++ED ++E IL G I+ GD +D G VI+ + + + +
Sbjct: 770 GARPLKRAIQSMVEDKISEAILEGKIKQGDEFIVDYVDGNTVIVKKEKASTSS 822
>gi|374995806|ref|YP_004971305.1| ATP-dependent chaperone ClpB [Desulfosporosinus orientis DSM 765]
gi|357214172|gb|AET68790.1| ATP-dependent chaperone ClpB [Desulfosporosinus orientis DSM 765]
Length = 866
Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 151/276 (54%), Positives = 199/276 (72%), Gaps = 2/276 (0%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DPNRP+ SFLF GPTGVGKTEL+ ALA F ++AMVRIDMSEYMEKHTVS+
Sbjct: 589 RARAGLQDPNRPLGSFLFLGPTGVGKTELSRALAEFLFDDEQAMVRIDMSEYMEKHTVSR 648
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E GGQLTEAVR +P+SVILFDE+EKAH DV NV+LQLLDDGR+TDG+G+
Sbjct: 649 LIGAPPGYVGYEEGGQLTEAVRRKPYSVILFDEVEKAHSDVFNVLLQLLDDGRLTDGQGR 708
Query: 125 TVDLKNTIIIMTSNIGDSVIAR--ESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVFR 182
V+ KNT++I+TSNI I + +++ + EELR FRPEFLNR+DEVIVF
Sbjct: 709 NVNFKNTVVILTSNIASPTIQELTQRNASKEEVRSAINEELRHYFRPEFLNRLDEVIVFH 768
Query: 183 QLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGRL 242
L + + +IV+I L ++ +RL + L +T+ K+KL EGY+P YGARPL+R I +
Sbjct: 769 PLGREHIGQIVNIQLGQLRKRLNDNKLTLELTNAAKEKLTNEGYDPIYGARPLKRVIQQR 828
Query: 243 LEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHR 278
L++ LA +L G + G + +D D GN + +
Sbjct: 829 LQNPLALKLLQGEFKPGQEILVDVDQFGNYAFFSKK 864
>gi|416127894|ref|ZP_11597159.1| negative regulator of genetic competence clpC/mecB [Staphylococcus
epidermidis FRI909]
gi|418328513|ref|ZP_12939624.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis 14.1.R1.SE]
gi|418631361|ref|ZP_13193825.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU128]
gi|418634140|ref|ZP_13196536.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU129]
gi|420178488|ref|ZP_14684819.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM057]
gi|420179587|ref|ZP_14685875.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM053]
gi|420191066|ref|ZP_14697002.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM037]
gi|420200939|ref|ZP_14706577.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM031]
gi|420203524|ref|ZP_14709086.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM015]
gi|420233736|ref|ZP_14738315.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH051475]
gi|319399727|gb|EFV87976.1| negative regulator of genetic competence clpC/mecB [Staphylococcus
epidermidis FRI909]
gi|365231831|gb|EHM72848.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis 14.1.R1.SE]
gi|374835462|gb|EHR99072.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU128]
gi|374837442|gb|EHS01006.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU129]
gi|394246423|gb|EJD91681.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM057]
gi|394253576|gb|EJD98581.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM053]
gi|394258024|gb|EJE02919.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM037]
gi|394267420|gb|EJE12013.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM031]
gi|394274485|gb|EJE18901.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM015]
gi|394304910|gb|EJE48301.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH051475]
Length = 817
Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 152/272 (55%), Positives = 200/272 (73%), Gaps = 9/272 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESIL-------GSD--QMERGVAEELRRRFRPEFLNRI 175
TVD +NT+IIMTSN+G + + GSD + + + +EL+ FRPEFLNR+
Sbjct: 646 TVDFRNTVIIMTSNVGAQELQDQRFAGFGGASEGSDYETVRKTMMKELKNSFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L K +L EIV +M+ ++ RL +N+ + VT K+K+ EEGY+P YGARPL
Sbjct: 706 DDIIVFHKLTKDELKEIVTMMVNKLTHRLSEQNINIVVTDKAKEKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RAI + +EDNL+E+IL G G VT+D D
Sbjct: 766 IRAIQKTVEDNLSELILDGNKIEGKEVTIDHD 797
>gi|189485561|ref|YP_001956502.1| chaperone ClpB [uncultured Termite group 1 bacterium phylotype
Rs-D17]
gi|170287520|dbj|BAG14041.1| chaperone ClpB [uncultured Termite group 1 bacterium phylotype
Rs-D17]
Length = 869
Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 150/275 (54%), Positives = 203/275 (73%), Gaps = 3/275 (1%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
R+R G+ DPNRPI SFLF GPTGVGKTELA ALA F ++ +VRIDMSEYMEKH+VS+
Sbjct: 594 RSRSGLSDPNRPIGSFLFLGPTGVGKTELAKALAELLFDDEKNIVRIDMSEYMEKHSVSR 653
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
F G+PPGYVGFE GGQLTEAVR RP+ ++LFDE+EKA+R+V NVMLQL DDGR+TDG+G+
Sbjct: 654 FIGAPPGYVGFEEGGQLTEAVRRRPYCIVLFDEVEKANREVFNVMLQLFDDGRLTDGRGK 713
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVFRQL 184
TVD KNT+IIMTSNIG I D+M+ V +ELR FRPEFLNRIDE+I+FR L
Sbjct: 714 TVDFKNTVIIMTSNIGSQHIQESE--NYDEMKNKVMQELRNYFRPEFLNRIDEIIIFRNL 771
Query: 185 NKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGRLLE 244
+M+L +I++I +K R AKN+ + +T K + +GY+P++GARPL+RAI L
Sbjct: 772 GEMELNKIIEIQIKSFESRFAAKNIHVKLTDKAKDFISSKGYDPAFGARPLKRAIQTYLL 831
Query: 245 DNLAEIILTGYIQVGDSVTMD-CDSGGNVIMYRHR 278
+ L+ +++G + GD++ + + G+ + ++ +
Sbjct: 832 NPLSSKLISGEFKEGDNIFVSAAEKAGDRLEFKKK 866
>gi|420213021|ref|ZP_14718362.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM001]
gi|394277269|gb|EJE21595.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM001]
Length = 817
Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 152/272 (55%), Positives = 200/272 (73%), Gaps = 9/272 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESIL-------GSD--QMERGVAEELRRRFRPEFLNRI 175
TVD +NT+IIMTSN+G + + GSD + + + +EL+ FRPEFLNR+
Sbjct: 646 TVDFRNTVIIMTSNVGAQELQDQRFAGFGGASEGSDYETVRKTMMKELKNSFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L K +L EIV +M+ ++ RL +N+ + VT K+K+ EEGY+P YGARPL
Sbjct: 706 DDIIVFHKLTKDELKEIVTMMVNKLTHRLSEQNINIVVTDKAKEKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RAI + +EDNL+E+IL G G VT+D D
Sbjct: 766 IRAIQKTVEDNLSELILDGNKIEGKEVTIDHD 797
>gi|319790046|ref|YP_004151679.1| ATPase AAA-2 domain protein [Thermovibrio ammonificans HB-1]
gi|317114548|gb|ADU97038.1| ATPase AAA-2 domain protein [Thermovibrio ammonificans HB-1]
Length = 847
Score = 314 bits (804), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 149/271 (54%), Positives = 203/271 (74%), Gaps = 4/271 (1%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++ PNRP+ SFLF GPTGVGKTELA ALA FG + A++R+DMSEYMEKH
Sbjct: 539 AIRRARAGLQPPNRPLGSFLFLGPTGVGKTELAKALAEYLFGDESAIIRLDMSEYMEKHA 598
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK G+PPGYVG+E GGQLTEAVR +P+SVIL DEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 599 VSKLIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPDVFNILLQILDDGRLTDA 658
Query: 122 KGQTVDLKNTIIIMTSNIGDSV---IARESILGS-DQMERGVAEELRRRFRPEFLNRIDE 177
KG+TVD NT+IIMTSN+G +++E + D+++ + EEL+RRFRPEFLNRIDE
Sbjct: 659 KGRTVDFSNTVIIMTSNVGSEYLMNLSKEEFEKNYDKIKEQIMEELKRRFRPEFLNRIDE 718
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+F L + ++ +IVD+++ ++ +RLE + +++ +T K +L + GY P +GARPLRR
Sbjct: 719 IIIFHPLAEEEIKKIVDLLIAKLNKRLEERGIKVKLTEAAKSELAKRGYVPEFGARPLRR 778
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDS 268
I R +E L+ IL G ++ GD+V +D D
Sbjct: 779 TIQREVETPLSVKILEGSVKEGDTVVVDYDK 809
>gi|312793061|ref|YP_004025984.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312180201|gb|ADQ40371.1| ATPase AAA-2 domain protein [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 829
Score = 314 bits (804), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 154/293 (52%), Positives = 208/293 (70%), Gaps = 11/293 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R RVG++DP RPI SF+F GPTGVGKTELA ALA FG+++AM+RIDMSEYMEK
Sbjct: 530 AIRRGRVGLKDPKRPIGSFIFLGPTGVGKTELARALAEALFGTEDAMIRIDMSEYMEKFN 589
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+E GGQLTE VR RP+SV+LFDEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 590 VSKLIGSPPGYVGYEEGGQLTEKVRRRPYSVVLFDEIEKAHPDVFNLLLQILDDGRLTDS 649
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----SDQMER-------GVAEELRRRFRPE 170
+G+TV +NT+IIMTSNIG ++I LG D+ +R V EL++ FRPE
Sbjct: 650 QGRTVSFRNTVIIMTSNIGANLITNPKKLGFSTSEDEKQRTYERIKENVMTELKKTFRPE 709
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNRIDE+IVF L++ + +IV+IMLK + ER++A T + + + ++G++P +
Sbjct: 710 FLNRIDEIIVFHPLDEEDVKKIVEIMLKNLQERIKASEYYAEFTTSLVEAIAKKGFDPVF 769
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMT 283
GARPL+RAI ++ED ++E IL G I+ GD +D G VI+ + + + +
Sbjct: 770 GARPLKRAIQSMVEDKISEAILEGKIKQGDEFIVDYVDGNTVIIKKEKASTSS 822
>gi|88809567|ref|ZP_01125074.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Synechococcus sp. WH 7805]
gi|88786317|gb|EAR17477.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Synechococcus sp. WH 7805]
Length = 872
Score = 314 bits (804), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 153/271 (56%), Positives = 198/271 (73%), Gaps = 8/271 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRPI+SFLF GPTGVGKTEL+ ALA + F S++AMVRIDMSEYMEKHT
Sbjct: 590 AIQRSRAGLSDPNRPIASFLFLGPTGVGKTELSKALAAQLFDSEDAMVRIDMSEYMEKHT 649
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEAVR RP++VILFDE+EKAH DV NVMLQ+LDDGRVTDG
Sbjct: 650 VSRLIGAPPGYVGYEAGGQLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDG 709
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD-----QMERGVAEELRRRFRPEFLNRID 176
+G+TVD N ++I+TSNIG I LG D +MER V + LR FRPEFLNR+D
Sbjct: 710 QGRTVDFTNAVLILTSNIGSQSILD---LGGDDGQHTEMERRVNDALRAHFRPEFLNRLD 766
Query: 177 EVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLR 236
+ I+F L + +L IV + ++ + RL+ + + L +T L GY+P YGARPL+
Sbjct: 767 DQIIFHSLRRDELRRIVTLQVERLRSRLDERKLGLNLTEAATDWLANAGYDPVYGARPLK 826
Query: 237 RAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RA+ R LE +A+ IL+G GD+V +D +
Sbjct: 827 RAVQRELETPIAKAILSGRYGDGDTVHVDVE 857
>gi|219848748|ref|YP_002463181.1| ATPase AAA-2 domain-containing protein [Chloroflexus aggregans DSM
9485]
gi|219543007|gb|ACL24745.1| ATPase AAA-2 domain protein [Chloroflexus aggregans DSM 9485]
Length = 826
Score = 314 bits (804), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 159/297 (53%), Positives = 205/297 (69%), Gaps = 14/297 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G+RDP RPI SFLF GPTGVGKTELA ALA F S+EAM R+DMSEY E+HT
Sbjct: 525 AIRRARSGLRDPRRPIGSFLFVGPTGVGKTELARALAEFMFDSEEAMTRVDMSEYQERHT 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTE+VR RP+ VILFDEIEKAHRDV N +LQ+LDDGR+TDG
Sbjct: 585 VSRLIGAPPGYVGYDEGGQLTESVRRRPYQVILFDEIEKAHRDVFNALLQVLDDGRLTDG 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESI-----------LGSDQMERGVAEELRRRFRPE 170
+G+TVD +NTIIIMTSN G + I + + + V E LR+ FRPE
Sbjct: 645 QGRTVDFRNTIIIMTSNAGTEYLQGGGIGFNVAGKAAKTIDLREARKKVDEALRQTFRPE 704
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNRIDE+I+F L+ L +IV++ L E+ RL + + LT+T K+ L+ EGYNP +
Sbjct: 705 FLNRIDEIILFHPLSMEDLTKIVELQLGELINRLREQQIGLTLTQAAKEYLVREGYNPVF 764
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMTVCAR 287
GARPLRR I RL+E ++ +L G+ GD + +D ++G V HR G +T+ R
Sbjct: 765 GARPLRRTIQRLVETPISRELLRGHFTAGDLIEVDVENGQLVF---HRGGILTMEER 818
>gi|27467205|ref|NP_763842.1| endopeptidase [Staphylococcus epidermidis ATCC 12228]
gi|57866102|ref|YP_187761.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus epidermidis RP62A]
gi|242241856|ref|ZP_04796301.1| ClpB ATPase [Staphylococcus epidermidis W23144]
gi|293367900|ref|ZP_06614538.1| conserved hypothetical protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|417658249|ref|ZP_12307885.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU045]
gi|417910375|ref|ZP_12554097.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU037]
gi|418604270|ref|ZP_13167628.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU041]
gi|418606457|ref|ZP_13169734.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU057]
gi|418609533|ref|ZP_13172675.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU065]
gi|418611880|ref|ZP_13174943.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU117]
gi|418626332|ref|ZP_13188945.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU126]
gi|420166780|ref|ZP_14673460.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM088]
gi|420175670|ref|ZP_14682104.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM061]
gi|420193494|ref|ZP_14699346.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM023]
gi|420196769|ref|ZP_14702508.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM020]
gi|420218753|ref|ZP_14723807.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH04008]
gi|420222653|ref|ZP_14727570.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH08001]
gi|420225510|ref|ZP_14730340.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH06004]
gi|420226413|ref|ZP_14731197.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH05003]
gi|420228732|ref|ZP_14733449.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH04003]
gi|420231100|ref|ZP_14735755.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH051668]
gi|81675398|sp|Q5HRM8.1|CLPC_STAEQ RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|81843102|sp|Q8CQ88.1|CLPC_STAES RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|27314747|gb|AAO03884.1|AE016744_287 endopeptidase [Staphylococcus epidermidis ATCC 12228]
gi|57636760|gb|AAW53548.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus epidermidis RP62A]
gi|242234634|gb|EES36946.1| ClpB ATPase [Staphylococcus epidermidis W23144]
gi|291317929|gb|EFE58337.1| conserved hypothetical protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329738043|gb|EGG74264.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU045]
gi|341650550|gb|EGS74370.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU037]
gi|374405287|gb|EHQ76229.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU041]
gi|374406860|gb|EHQ77735.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU065]
gi|374407864|gb|EHQ78709.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU057]
gi|374821395|gb|EHR85458.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU117]
gi|374832889|gb|EHR96592.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU126]
gi|394232700|gb|EJD78313.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM088]
gi|394242848|gb|EJD88226.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM061]
gi|394259936|gb|EJE04764.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM023]
gi|394267271|gb|EJE11872.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM020]
gi|394288915|gb|EJE32813.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH08001]
gi|394291827|gb|EJE35612.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH04008]
gi|394293577|gb|EJE37291.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH06004]
gi|394298789|gb|EJE42351.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH05003]
gi|394300195|gb|EJE43711.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH04003]
gi|394303175|gb|EJE46603.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH051668]
Length = 817
Score = 314 bits (804), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 152/272 (55%), Positives = 200/272 (73%), Gaps = 9/272 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESIL-------GSD--QMERGVAEELRRRFRPEFLNRI 175
TVD +NT+IIMTSN+G + + GSD + + + +EL+ FRPEFLNR+
Sbjct: 646 TVDFRNTVIIMTSNVGAQELQDQRFAGFGGASEGSDYETVRKTMMKELKNSFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L K +L EIV +M+ ++ RL +N+ + VT K+K+ EEGY+P YGARPL
Sbjct: 706 DDIIVFHKLTKDELKEIVTMMVNKLTHRLSEQNINIVVTDKAKEKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RAI + +EDNL+E+IL G G VT+D D
Sbjct: 766 IRAIQKTVEDNLSELILDGNKIEGKEVTIDHD 797
>gi|251809941|ref|ZP_04824414.1| ClpB ATPase [Staphylococcus epidermidis BCM-HMP0060]
gi|282875025|ref|ZP_06283900.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis SK135]
gi|417646131|ref|ZP_12296010.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU144]
gi|417657343|ref|ZP_12307008.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU028]
gi|417911486|ref|ZP_12555191.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU105]
gi|417914018|ref|ZP_12557673.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU109]
gi|418326361|ref|ZP_12937547.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU071]
gi|418412965|ref|ZP_12986212.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
epidermidis BVS058A4]
gi|418617569|ref|ZP_13180460.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU120]
gi|418621530|ref|ZP_13184299.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU123]
gi|418624700|ref|ZP_13187370.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU125]
gi|418629608|ref|ZP_13192105.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU127]
gi|418664665|ref|ZP_13226132.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU081]
gi|419770348|ref|ZP_14296428.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-250]
gi|419772786|ref|ZP_14298812.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-K]
gi|420169340|ref|ZP_14675941.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM087]
gi|420171652|ref|ZP_14678190.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM070]
gi|420172258|ref|ZP_14678768.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM067]
gi|420182216|ref|ZP_14688354.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM049]
gi|420186453|ref|ZP_14692521.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM040]
gi|420188161|ref|ZP_14694175.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM039]
gi|420195785|ref|ZP_14701572.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM021]
gi|420203004|ref|ZP_14708590.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM018]
gi|420207055|ref|ZP_14712558.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM008]
gi|420208689|ref|ZP_14714147.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM003]
gi|420213834|ref|ZP_14719116.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH05005]
gi|420218208|ref|ZP_14723306.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH05001]
gi|421607888|ref|ZP_16049122.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus epidermidis AU12-03]
gi|251806484|gb|EES59141.1| ClpB ATPase [Staphylococcus epidermidis BCM-HMP0060]
gi|281296353|gb|EFA88872.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis SK135]
gi|329729477|gb|EGG65880.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU144]
gi|329734648|gb|EGG70955.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU028]
gi|341653063|gb|EGS76836.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU105]
gi|341653849|gb|EGS77614.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU109]
gi|365225772|gb|EHM67010.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU071]
gi|374410321|gb|EHQ81080.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU081]
gi|374817996|gb|EHR82168.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU120]
gi|374826897|gb|EHR90773.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU125]
gi|374828761|gb|EHR92586.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU123]
gi|374833371|gb|EHR97059.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU127]
gi|383357294|gb|EID34769.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-250]
gi|383358879|gb|EID36321.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-K]
gi|394231370|gb|EJD77000.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM087]
gi|394237114|gb|EJD82609.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM070]
gi|394242898|gb|EJD88275.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM067]
gi|394250200|gb|EJD95394.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM049]
gi|394252169|gb|EJD97210.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM040]
gi|394255421|gb|EJE00372.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM039]
gi|394262906|gb|EJE07658.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM021]
gi|394268877|gb|EJE13428.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM018]
gi|394276375|gb|EJE20716.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM008]
gi|394281390|gb|EJE25639.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM003]
gi|394284232|gb|EJE28386.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH05005]
gi|394284688|gb|EJE28790.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH05001]
gi|406656502|gb|EKC82907.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus epidermidis AU12-03]
gi|410879558|gb|EKS27399.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
epidermidis BVS058A4]
Length = 817
Score = 314 bits (804), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 152/272 (55%), Positives = 200/272 (73%), Gaps = 9/272 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESIL-------GSD--QMERGVAEELRRRFRPEFLNRI 175
TVD +NT+IIMTSN+G + + GSD + + + +EL+ FRPEFLNR+
Sbjct: 646 TVDFRNTVIIMTSNVGAQELQDQRFAGFGGASEGSDYETVRKTMMKELKNSFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L K +L EIV +M+ ++ RL +N+ + VT K+K+ EEGY+P YGARPL
Sbjct: 706 DDIIVFHKLTKDELKEIVTMMVNKLTHRLSEQNINIVVTDKAKEKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RAI + +EDNL+E+IL G G VT+D D
Sbjct: 766 IRAIQKTVEDNLSELILDGNKIEGKEVTIDHD 797
>gi|452990568|emb|CCQ98240.1| class III stress response-related ATPase, AAA+ superfamily
[Clostridium ultunense Esp]
Length = 812
Score = 314 bits (804), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 150/272 (55%), Positives = 205/272 (75%), Gaps = 11/272 (4%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RARVG++DP +P+ +F+F GPTGVGKT LA ALA FG +E+M+RIDMSEYMEKH+VS+
Sbjct: 527 RARVGLKDPKKPVGTFIFVGPTGVGKTYLAKALAETLFGDEESMIRIDMSEYMEKHSVSR 586
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPGYVG++ GGQLTEAVR +P+SVILFDEIEKAH DV N++LQ+LDDGR+TD KG+
Sbjct: 587 LVGSPPGYVGYDEGGQLTEAVRRKPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSKGR 646
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG-----------SDQMERGVAEELRRRFRPEFLN 173
TVD KNT+IIMTSN+G + I ++++LG ++M+ + +ELRR FRPEFLN
Sbjct: 647 TVDFKNTVIIMTSNVGATSIRKQNVLGFSPASEEEKEEYEKMKENIMDELRRTFRPEFLN 706
Query: 174 RIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGAR 233
RIDEVIVF L + + EIV IM+K++ ++++ N+ + VT + +G++P YGAR
Sbjct: 707 RIDEVIVFHSLKEEDVKEIVGIMIKDLEKKMKKLNINIKVTDRTIDYISRKGFDPVYGAR 766
Query: 234 PLRRAIGRLLEDNLAEIILTGYIQVGDSVTMD 265
PL R I +++ED LAE IL G + D++++D
Sbjct: 767 PLERTITKMIEDQLAEEILKGKVSKDDNISID 798
>gi|418614178|ref|ZP_13177162.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU118]
gi|374821459|gb|EHR85520.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU118]
Length = 817
Score = 314 bits (804), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 152/272 (55%), Positives = 200/272 (73%), Gaps = 9/272 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESIL-------GSD--QMERGVAEELRRRFRPEFLNRI 175
TVD +NT+IIMTSN+G + + GSD + + + +EL+ FRPEFLNR+
Sbjct: 646 TVDFRNTVIIMTSNVGAQELQDQRFAGFGGASEGSDYETVRKTMMKELKNSFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L K +L EIV +M+ ++ RL +N+ + VT K+K+ EEGY+P YGARPL
Sbjct: 706 DDIIVFHKLTKDELKEIVTMMVNKLTHRLSEQNINIVVTDKAKEKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RAI + +EDNL+E+IL G G VT+D D
Sbjct: 766 IRAIQKTVEDNLSELILDGNKIEGKEVTIDHD 797
>gi|344996728|ref|YP_004799071.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343964947|gb|AEM74094.1| ATPase AAA-2 domain protein [Caldicellulosiruptor lactoaceticus 6A]
Length = 829
Score = 314 bits (804), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 154/293 (52%), Positives = 208/293 (70%), Gaps = 11/293 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R RVG++DP RPI SF+F GPTGVGKTELA ALA FG+++AM+RIDMSEYMEK
Sbjct: 530 AIRRGRVGLKDPKRPIGSFIFLGPTGVGKTELARALAEALFGTEDAMIRIDMSEYMEKFN 589
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+E GGQLTE VR RP+SV+LFDEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 590 VSKLIGSPPGYVGYEEGGQLTEKVRRRPYSVVLFDEIEKAHPDVFNLLLQILDDGRLTDS 649
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----SDQMER-------GVAEELRRRFRPE 170
+G+TV +NT+IIMTSNIG ++I LG D+ +R V EL++ FRPE
Sbjct: 650 QGRTVSFRNTVIIMTSNIGANLITNPKKLGFSTSEDEKQRTYERIKENVMTELKKTFRPE 709
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNRIDE+IVF L++ + +IV+IMLK + ER++A T + + + ++G++P +
Sbjct: 710 FLNRIDEIIVFHPLDEEDVKKIVEIMLKNLQERIKASEYYAEFTTSLVEAIAKKGFDPVF 769
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMT 283
GARPL+RAI ++ED ++E IL G I+ GD +D G VI+ + + + +
Sbjct: 770 GARPLKRAIQSMVEDKISEAILEGKIKQGDEFIVDYVDGNTVIIKKEKASTSS 822
>gi|119509203|ref|ZP_01628353.1| ATPase [Nodularia spumigena CCY9414]
gi|119466045|gb|EAW46932.1| ATPase [Nodularia spumigena CCY9414]
Length = 872
Score = 314 bits (804), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 153/269 (56%), Positives = 197/269 (73%), Gaps = 6/269 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRPI+SF+F GPTGVGKTELA ALA F ++E++VRIDMSEYMEKH
Sbjct: 589 AIQRSRAGLADPNRPIASFIFLGPTGVGKTELAKALAAYMFDTEESLVRIDMSEYMEKHA 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTE +R RP++VILFDEIEKAH DV N++LQ+LDDGRVTD
Sbjct: 649 VSRLIGAPPGYVGYEEGGQLTEVIRRRPYAVILFDEIEKAHADVFNILLQILDDGRVTDS 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS----DQMERGVAEELRRRFRPEFLNRIDE 177
+G+TVD KN IIIMTSNIG I + G D+M R V E +R FRPEFLNRIDE
Sbjct: 709 QGRTVDFKNAIIIMTSNIGSQYIL--DVAGEAEHYDEMRRRVMEAMRNSFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+F L+K +L +IV + ++ + ERL + M L ++ + L E GY+P YGARPL+R
Sbjct: 767 IIIFHGLDKKELRQIVLLQVERLRERLSDRKMSLKLSDSSLDFLAEVGYDPVYGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
AI R LE +A+ IL G GD++ +D
Sbjct: 827 AIQRELETQIAKAILRGEFHDGDTIFVDV 855
>gi|116075417|ref|ZP_01472677.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Synechococcus sp. RS9916]
gi|116067614|gb|EAU73368.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Synechococcus sp. RS9916]
Length = 877
Score = 314 bits (804), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 152/270 (56%), Positives = 196/270 (72%), Gaps = 8/270 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRPI+SFLF GPTGVGKTEL+ ALA + F S +AMVRIDMSEYMEKH+
Sbjct: 590 AIQRSRAGLSDPNRPIASFLFLGPTGVGKTELSKALAAQLFDSDDAMVRIDMSEYMEKHS 649
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEA+R RP+SV+LFDE+EKAH DV NVMLQ+LDDGRVTDG
Sbjct: 650 VSRLIGAPPGYVGYEAGGQLTEAIRRRPYSVVLFDEVEKAHPDVFNVMLQILDDGRVTDG 709
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD-----QMERGVAEELRRRFRPEFLNRID 176
+G+TVD N ++I+TSNIG I LG D +MER V E LR FRPEFLNR+D
Sbjct: 710 QGRTVDFTNAVLILTSNIGSQSILD---LGGDDSQHSEMERRVNEALRAHFRPEFLNRLD 766
Query: 177 EVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLR 236
+ I+F L + +L +IV + ++ + RL + + LT++ L GY+P YGARPL+
Sbjct: 767 DQIIFHSLRREELRQIVSLQVERLRHRLSDRKLSLTISEGATDWLANAGYDPVYGARPLK 826
Query: 237 RAIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
RAI R LE +A+ IL G+ G +V +D
Sbjct: 827 RAIQRELETPIAKAILGGHYGEGATVEVDA 856
>gi|56418613|ref|YP_145931.1| ATP-dependent Clp protease ATPase [Geobacillus kaustophilus HTA426]
gi|297528454|ref|YP_003669729.1| ATPase AAA [Geobacillus sp. C56-T3]
gi|375006890|ref|YP_004980520.1| negative regulator of genetic competence [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|448236388|ref|YP_007400446.1| ATP-dependent Clp protease [Geobacillus sp. GHH01]
gi|56378455|dbj|BAD74363.1| ATP-dependent Clp protease ATPase subunit [Geobacillus kaustophilus
HTA426]
gi|297251706|gb|ADI25152.1| ATPase AAA-2 domain protein [Geobacillus sp. C56-T3]
gi|359285736|gb|AEV17420.1| Negative regulator of genetic competence [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|445205230|gb|AGE20695.1| ATP-dependent Clp protease [Geobacillus sp. GHH01]
Length = 810
Score = 314 bits (804), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 149/285 (52%), Positives = 203/285 (71%), Gaps = 9/285 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++A++RIDMSEYMEKH+
Sbjct: 523 AVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEAMFGDEDALIRIDMSEYMEKHS 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG+E GGQLTE VR +P+SV+L DE+EKAH DV N++LQ+L+DGR+TD
Sbjct: 583 TSRLIGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEMEKAHPDVFNILLQVLEDGRLTDS 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD---------QMERGVAEELRRRFRPEFL 172
KG+TVD +NTIIIMTSN+G + R +G + M+ V +EL++ FRPEFL
Sbjct: 643 KGRTVDFRNTIIIMTSNVGADALKRNKYVGFNIQDGNQQYKDMKSKVMDELKKAFRPEFL 702
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE+IVF L K L +IV +M + +RL+ ++++L +T +K+ EG++P YGA
Sbjct: 703 NRIDEIIVFHSLEKDHLKQIVRLMADTLVKRLKEQDIDLELTEAAIEKIAAEGFDPEYGA 762
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRH 277
RPLRRA+ + +ED L+E +L G I G V +D G V++ +
Sbjct: 763 RPLRRALQKHVEDRLSEELLKGTIAKGQKVVVDVKDGEFVVLSKQ 807
>gi|357039780|ref|ZP_09101572.1| ATPase AAA-2 domain protein [Desulfotomaculum gibsoniae DSM 7213]
gi|355357586|gb|EHG05359.1| ATPase AAA-2 domain protein [Desulfotomaculum gibsoniae DSM 7213]
Length = 815
Score = 314 bits (804), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 151/281 (53%), Positives = 206/281 (73%), Gaps = 10/281 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AMVRIDMSEYMEK
Sbjct: 530 AIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEAMFGDEDAMVRIDMSEYMEKFA 589
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLT+AVR +P+SV+L DEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 590 VSRLVGAPPGYVGYDEGGQLTDAVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDA 649
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
KG+TVD +NT+IIMTSN+G +I RE+ +G + M++ V ++LRR FRPEF
Sbjct: 650 KGRTVDFRNTVIIMTSNVGVGLIKRETTMGFKTNEGANTSYENMKKRVMDDLRRAFRPEF 709
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNRID++IVF L+++ + EIV +M++E+ RL + + VT + L EG++ YG
Sbjct: 710 LNRIDDIIVFHGLSQVHIKEIVGLMVQEVAGRLAENEIAIEVTDAAGEYLAREGFDEEYG 769
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
ARPLRRAI + +ED L+E +L G + GD V +D ++GG +
Sbjct: 770 ARPLRRAIQKEIEDRLSEEMLRGTFRRGDRVLIDKETGGGL 810
>gi|261417579|ref|YP_003251261.1| ATPase AAA [Geobacillus sp. Y412MC61]
gi|319765237|ref|YP_004130738.1| ATPase AAA [Geobacillus sp. Y412MC52]
gi|261374036|gb|ACX76779.1| ATPase AAA-2 domain protein [Geobacillus sp. Y412MC61]
gi|317110103|gb|ADU92595.1| ATPase AAA-2 domain protein [Geobacillus sp. Y412MC52]
Length = 810
Score = 313 bits (803), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 149/285 (52%), Positives = 203/285 (71%), Gaps = 9/285 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++A++RIDMSEYMEKH+
Sbjct: 523 AVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEAMFGDEDALIRIDMSEYMEKHS 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG+E GGQLTE VR +P+SV+L DE+EKAH DV N++LQ+L+DGR+TD
Sbjct: 583 TSRLIGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEMEKAHPDVFNILLQVLEDGRLTDS 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD---------QMERGVAEELRRRFRPEFL 172
KG+TVD +NTIIIMTSN+G + R +G + M+ V +EL++ FRPEFL
Sbjct: 643 KGRTVDFRNTIIIMTSNVGADALKRNKYVGFNIQDGNQQYKDMKSKVMDELKKAFRPEFL 702
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE+IVF L K L +IV +M + +RL+ ++++L +T +K+ EG++P YGA
Sbjct: 703 NRIDEIIVFHSLEKDHLKQIVRLMADTLVKRLKEQDIDLELTEAAIEKIAAEGFDPEYGA 762
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRH 277
RPLRRA+ + +ED L+E +L G I G V +D G V++ +
Sbjct: 763 RPLRRALQKHVEDRLSEELLKGTIAKGQKVVVDVKDGEFVVLSKQ 807
>gi|402813960|ref|ZP_10863554.1| chaperone protein ClpB [Paenibacillus alvei DSM 29]
gi|402507807|gb|EJW18328.1| chaperone protein ClpB [Paenibacillus alvei DSM 29]
Length = 551
Score = 313 bits (803), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 149/293 (50%), Positives = 206/293 (70%), Gaps = 10/293 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RP+ SF+F GPTGVGKTELA ALA FG + A++RIDMSEYMEKH+
Sbjct: 259 AIRRARAGLKDPKRPMGSFIFLGPTGVGKTELARALAESLFGDENAVIRIDMSEYMEKHS 318
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
++ G+PPGYVG+E GGQLTE VR +P+SV+L DEIEKAH +V N++LQ+L+DGR+TD
Sbjct: 319 TARLVGAPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDS 378
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
KG+ VD +NT+II+TSN+G I R S LG + M+ V EL++ FRPEF
Sbjct: 379 KGRVVDFRNTLIILTSNVGAEAIKRNSTLGFTAIDDAGKDYNNMKDKVMGELKKSFRPEF 438
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNRIDE+IVF L + + EIV +M E+ +RL+ ++++ +T K L +EG++P+YG
Sbjct: 439 LNRIDEIIVFHSLEQQHIAEIVSLMAGELRKRLKEQDVDFQLTDNAKNFLAKEGFDPAYG 498
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMTV 284
ARPLRRAI + +ED L+E +L G + GDSV +D G V+++ + V
Sbjct: 499 ARPLRRAIQKHIEDRLSEELLKGNVSKGDSVVIDEKDGELVVLHNKEANTANV 551
>gi|54035803|sp|Q7U637.2|CLPB1_SYNPX RecName: Full=Chaperone protein ClpB 1
Length = 862
Score = 313 bits (803), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 153/270 (56%), Positives = 196/270 (72%), Gaps = 8/270 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRPI+SFLF GPTGVGKTEL+ ALA F S +AMVRIDMSEYMEKHT
Sbjct: 588 AIQRSRAGLSDPNRPIASFLFLGPTGVGKTELSKALANRLFDSDDAMVRIDMSEYMEKHT 647
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEAVR RP++VILFDE+EKAH DV NVMLQ+LDDGRVTDG
Sbjct: 648 VSRLIGAPPGYVGYEAGGQLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDG 707
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD-----QMERGVAEELRRRFRPEFLNRID 176
+G+TVD NT++I+TSNIG I L D ME+ V E L+ +FRPEFLNR+D
Sbjct: 708 QGRTVDFTNTVLILTSNIGSQSILE---LAGDPEQHTAMEQRVNEALKAKFRPEFLNRLD 764
Query: 177 EVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLR 236
+ I+FR L K +L IV + ++ + RLE + ++L ++ L G++P YGARPL+
Sbjct: 765 DQIIFRSLEKEELRRIVSLQVERLRSRLEQRKLDLQLSDIAADWLATIGFDPVYGARPLK 824
Query: 237 RAIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
RAI R LE +A+ IL G + G +V +D
Sbjct: 825 RAIQRELETPIAKAILAGQLSEGQTVQVDA 854
>gi|428306875|ref|YP_007143700.1| ATP-dependent chaperone ClpB [Crinalium epipsammum PCC 9333]
gi|428248410|gb|AFZ14190.1| ATP-dependent chaperone ClpB [Crinalium epipsammum PCC 9333]
Length = 875
Score = 313 bits (803), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 155/271 (57%), Positives = 197/271 (72%), Gaps = 6/271 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRP +SF+F GPTGVGKTEL ALA F +++A+VRIDMSEYMEKH
Sbjct: 589 AIQRSRAGLADPNRPTASFIFLGPTGVGKTELGKALAAYLFDTEDALVRIDMSEYMEKHA 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEA+R RP+SVILFDEIEKAH DV NVMLQ+LDDGRVTD
Sbjct: 649 VSRLIGAPPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRVTDS 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS----DQMERGVAEELRRRFRPEFLNRIDE 177
+G+TVD KNTIIIMTSNIG I I G ++M V + +R FRPEFLNRIDE
Sbjct: 709 QGRTVDFKNTIIIMTSNIGSQFIL--DIAGDETRYEEMRSRVMDAMRNSFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+F L+K +L IV + +K + ERL + M L ++ + L E GY+P YGARPL+R
Sbjct: 767 IIIFHGLSKAELRYIVQLQIKRLQERLRDRKMSLKLSESALDFLAEVGYDPVYGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDS 268
AI R LE +A+ IL G GD++ +D ++
Sbjct: 827 AIQRELETQIAKSILRGDFNDGDTIYVDVEN 857
>gi|251799676|ref|YP_003014407.1| ATPase AAA [Paenibacillus sp. JDR-2]
gi|247547302|gb|ACT04321.1| ATPase AAA-2 domain protein [Paenibacillus sp. JDR-2]
Length = 817
Score = 313 bits (803), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 152/279 (54%), Positives = 200/279 (71%), Gaps = 10/279 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FG + A++RIDMSEYMEKH+
Sbjct: 523 AIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEAMFGDENAVIRIDMSEYMEKHS 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ G+PPGYVG+E GGQLTE VR +P+SV+L DEIEKAH +V N++LQ+L+DGR+TD
Sbjct: 583 TSRLVGAPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDS 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
KG+ VD +NT+IIMTSN+G I R S LG +QM+ V EL++ FRPEF
Sbjct: 643 KGRVVDFRNTLIIMTSNVGADQIKRNSSLGFTAVQDSGREFNQMKDKVMTELKKSFRPEF 702
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNRIDE IVF L + + +IV +M E+ +RL + ++ +T + K L +EG++P YG
Sbjct: 703 LNRIDETIVFHSLEQEHIAQIVTLMSDELRKRLREQEVDFILTDSAKAFLAKEGFDPQYG 762
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGG 270
ARPLRRAI + +ED L+E +L G I+ GDS T+D GG
Sbjct: 763 ARPLRRAIQKHIEDRLSEDLLLGKIRKGDSFTIDEKDGG 801
>gi|124025347|ref|YP_001014463.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Prochlorococcus marinus str. NATL1A]
gi|123960415|gb|ABM75198.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Prochlorococcus marinus str. NATL1A]
Length = 863
Score = 313 bits (803), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 144/267 (53%), Positives = 200/267 (74%), Gaps = 2/267 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DP+RPI+SFLF GPTGVGKTEL+ ALA + F S+ A++RIDMSEYMEKH+
Sbjct: 589 AIQRSRTGLSDPSRPIASFLFLGPTGVGKTELSKALASQLFDSENALIRIDMSEYMEKHS 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
+S+ G+PPGYVG+E GGQLTEA+R +P+ V+LFDEIEKAH+DV NV+LQ+LD+GRVTDG
Sbjct: 649 ISRLIGAPPGYVGYEAGGQLTEAIRRKPYCVLLFDEIEKAHKDVFNVLLQILDEGRVTDG 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG--SDQMERGVAEELRRRFRPEFLNRIDEVI 179
+G+T + KNTIII+TSN+G +I+ + S ++ + +EL+ FRPEFLNR+DE+I
Sbjct: 709 QGRTTNFKNTIIILTSNLGSELISDNDVTNDPSTNIDELINQELKSNFRPEFLNRLDEII 768
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
F L K L+++VD+ L + ERLEAK +EL + + E GYNPSYGARPL+R I
Sbjct: 769 NFEPLKKETLLKVVDLQLNRLRERLEAKGIELEINDDVLSLITELGYNPSYGARPLKRVI 828
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDC 266
+ LE +A+ IL G + G ++ ++
Sbjct: 829 QKELESEIAKYILKGKYKEGSTIKIES 855
>gi|417902906|ref|ZP_12546767.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21269]
gi|341850525|gb|EGS91643.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21269]
Length = 818
Score = 313 bits (803), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 152/270 (56%), Positives = 198/270 (73%), Gaps = 9/270 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG----SD-----QMERGVAEELRRRFRPEFLNRI 175
TVD +NTIIIMTSN+G + + G SD + + + +EL+ FRPEFLNR+
Sbjct: 646 TVDFRNTIIIMTSNVGAQELQDQRFAGFGGSSDGQDYETIRKTMLKELKNSFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L K +L EIV +M+ ++ RL +N+ + VT K K+ EEGY+P YGARPL
Sbjct: 706 DDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMD 265
RAI + +EDNL+E+IL G G VT+D
Sbjct: 766 IRAIQKTIEDNLSELILNGNQIEGKKVTVD 795
>gi|116619644|ref|YP_821800.1| ATPase [Candidatus Solibacter usitatus Ellin6076]
gi|116222806|gb|ABJ81515.1| ATPase AAA-2 domain protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 869
Score = 313 bits (803), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 155/271 (57%), Positives = 199/271 (73%), Gaps = 6/271 (2%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA F + AM+RIDMSEY EKHTVS+
Sbjct: 583 RARSGLKDPQRPIGSFIFMGPTGVGKTELARALAEYMFDDEHAMIRIDMSEYQEKHTVSR 642
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG++ GGQLTEAVR RP+SVILFDEIEKAH DV NV+LQ+LDDGR+TDG+G+
Sbjct: 643 LVGAPPGYVGYDEGGQLTEAVRRRPYSVILFDEIEKAHHDVFNVLLQVLDDGRLTDGQGR 702
Query: 125 TVDLKNTIIIMTSNIGDSVI----ARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
TVD KNTI+IMTSN+G + I S G ++M+ V EE+RR+FRPEFLNR+DE+IV
Sbjct: 703 TVDFKNTIVIMTSNVGSARILEYQGAYSGAGFERMKEAVLEEMRRQFRPEFLNRVDEIIV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L++ L +IV+I L + RL +++ L +T + L+ GY+P YGARPL+RAI
Sbjct: 763 FHALSEEDLKKIVEIQLGRLRARLADRHITLELTDAARANLVHTGYDPHYGARPLKRAIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDC--DSG 269
+ +E L ++ G I+ G V +D DSG
Sbjct: 823 KKIETPLGRQLIQGAIRDGQVVKVDATGDSG 853
>gi|33866037|ref|NP_897596.1| endopeptidase Clp ATP-binding chain B [Synechococcus sp. WH 8102]
gi|33639012|emb|CAE08018.1| endopeptidase Clp ATP-binding chain B [Synechococcus sp. WH 8102]
Length = 875
Score = 313 bits (802), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 153/270 (56%), Positives = 196/270 (72%), Gaps = 8/270 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRPI+SFLF GPTGVGKTEL+ ALA F S +AMVRIDMSEYMEKHT
Sbjct: 601 AIQRSRAGLSDPNRPIASFLFLGPTGVGKTELSKALANRLFDSDDAMVRIDMSEYMEKHT 660
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEAVR RP++VILFDE+EKAH DV NVMLQ+LDDGRVTDG
Sbjct: 661 VSRLIGAPPGYVGYEAGGQLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDG 720
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD-----QMERGVAEELRRRFRPEFLNRID 176
+G+TVD NT++I+TSNIG I L D ME+ V E L+ +FRPEFLNR+D
Sbjct: 721 QGRTVDFTNTVLILTSNIGSQSILE---LAGDPEQHTAMEQRVNEALKAKFRPEFLNRLD 777
Query: 177 EVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLR 236
+ I+FR L K +L IV + ++ + RLE + ++L ++ L G++P YGARPL+
Sbjct: 778 DQIIFRSLEKEELRRIVSLQVERLRSRLEQRKLDLQLSDIAADWLATIGFDPVYGARPLK 837
Query: 237 RAIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
RAI R LE +A+ IL G + G +V +D
Sbjct: 838 RAIQRELETPIAKAILAGQLSEGQTVQVDA 867
>gi|164688260|ref|ZP_02212288.1| hypothetical protein CLOBAR_01905 [Clostridium bartlettii DSM
16795]
gi|164602673|gb|EDQ96138.1| ATP-dependent chaperone protein ClpB [Clostridium bartlettii DSM
16795]
Length = 864
Score = 313 bits (802), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 149/268 (55%), Positives = 201/268 (75%), Gaps = 1/268 (0%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++D N+PI SF+F GPTGVGKTELA LA F S+E ++RIDMSEYMEKH+VS+
Sbjct: 593 RARAGLKDENKPIGSFIFLGPTGVGKTELAKTLARSLFDSEENIIRIDMSEYMEKHSVSR 652
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G PPGYVG+E GGQLTEAVR P+SVILFDEIEKAH DV N+ LQ+LDDGR+TD KG
Sbjct: 653 LVGPPPGYVGYEEGGQLTEAVRRAPYSVILFDEIEKAHEDVFNMFLQILDDGRLTDNKGN 712
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVFRQL 184
TVD KNTIIIMTSNIG S + ++ +++ + V E++RRF+PEFLNR+D++I+F+ L
Sbjct: 713 TVDFKNTIIIMTSNIGSSYLLQDQGKITEETKGLVMGEMKRRFKPEFLNRVDDIIMFKSL 772
Query: 185 NKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGRLLE 244
+K ++ +I+DI + + RL+ K++ + VT K ++ EGY+P YGARPL+R IG LE
Sbjct: 773 DKEEIKKIIDIFMNSLANRLKDKDINMEVTDAAKDIMVREGYDPVYGARPLKRYIGNTLE 832
Query: 245 DNLAEIILTGYIQVGDSVTMDCDSGGNV 272
+A ++ G I+ GD++ +D D G N+
Sbjct: 833 TIIARKLIAGQIRNGDTIVVDGD-GDNI 859
>gi|209525054|ref|ZP_03273598.1| ATP-dependent chaperone ClpB [Arthrospira maxima CS-328]
gi|209494463|gb|EDZ94774.1| ATP-dependent chaperone ClpB [Arthrospira maxima CS-328]
Length = 872
Score = 313 bits (802), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 153/271 (56%), Positives = 199/271 (73%), Gaps = 6/271 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+++R+R G+ DPNRP++SF+F GPTGVGKTELA ALA F ++EA+VR+DMSEYMEKH+
Sbjct: 589 SIQRSRAGLSDPNRPVASFIFLGPTGVGKTELAKALASYLFDTEEAIVRVDMSEYMEKHS 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTEA+R RP++VILFDEIEKAH DV NVMLQ+LDDGRVTD
Sbjct: 649 VSRLLGAPPGYVGYDEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNVMLQILDDGRVTDA 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD----QMERGVAEELRRRFRPEFLNRIDE 177
+G+TVD KNTIIIMTSNIG I I G D +M V + +R FRPEFLNRIDE
Sbjct: 709 QGRTVDFKNTIIIMTSNIGSQYIL--DIAGDDSRYEEMRHRVMDSMRSAFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+F L QL EIV + L + +RLE M L ++ + L + G++P YGARPL+R
Sbjct: 767 IIIFHSLKPHQLREIVLLQLGNLSQRLEQHKMSLKLSESALDYLADVGFDPVYGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDS 268
AI R LE +A+ IL G G+++ +D ++
Sbjct: 827 AIQRELETQIAKGILRGEFNDGNTIYVDVEN 857
>gi|406837813|ref|ZP_11097407.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
vini DSM 20605]
Length = 821
Score = 313 bits (802), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 150/294 (51%), Positives = 207/294 (70%), Gaps = 9/294 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DPNRPI SF+F GPTGVGKTELA ALA FGS+ A++RIDMSEYMEK++
Sbjct: 524 AIRRARSGLKDPNRPIGSFMFLGPTGVGKTELAKALAEAMFGSENAIIRIDMSEYMEKYS 583
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG++ GGQLTE VR P+SV+LFDEIEKAH DV N++LQ+LDDG +TD
Sbjct: 584 TSRLVGSPPGYVGYDEGGQLTEKVRQHPYSVVLFDEIEKAHPDVFNILLQVLDDGYLTDS 643
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQ---------MERGVAEELRRRFRPEFL 172
KG+ VD +NTIIIMTSN+G + + E +G + M + E L++ FRPEFL
Sbjct: 644 KGRKVDFRNTIIIMTSNLGATALRDEKQVGFSRKNTQNDFQAMSTKIKEVLKQTFRPEFL 703
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE I+F QL+K +L +IV +M KE+ +R+ +N+++ +T + E+G++P YGA
Sbjct: 704 NRIDETIIFHQLDKDELHQIVKLMAKEVLDRVREQNVKIKITPAAIDLVAEKGFDPEYGA 763
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMTVCA 286
RP+RRA+ +ED L+E+++TG I+VG V++ G VI + + A
Sbjct: 764 RPIRRALQTEVEDKLSEMLITGQIKVGSVVSVGASRGKIVINVKESKQDLKKSA 817
>gi|379724697|ref|YP_005316828.1| protein ClpC [Paenibacillus mucilaginosus 3016]
gi|386727451|ref|YP_006193777.1| protein ClpC [Paenibacillus mucilaginosus K02]
gi|378573369|gb|AFC33679.1| ClpC [Paenibacillus mucilaginosus 3016]
gi|384094576|gb|AFH66012.1| protein ClpC [Paenibacillus mucilaginosus K02]
Length = 814
Score = 313 bits (802), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 150/282 (53%), Positives = 205/282 (72%), Gaps = 10/282 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RP+ SF+F GPTGVGKTELA ALA FG + +++RIDMSEYMEKH+
Sbjct: 523 AIRRARAGLKDPKRPMGSFIFLGPTGVGKTELARALAESLFGDENSVIRIDMSEYMEKHS 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ G+PPGYVG+E GGQLTE VR +P+SV+L DEIEKAH +V N++LQ+L+DGR+TD
Sbjct: 583 TSRLVGAPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDS 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
KG+TVD +NT+IIMTSN+G VI + S LG M+ V EL++ FRPEF
Sbjct: 643 KGRTVDFRNTLIIMTSNVGADVIKKNSTLGFTATIDAGKEYGNMKDKVMGELKKSFRPEF 702
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNRIDE+IVF L++ + +IV +M +E+ +RL+ + ++ +T K L +EGY+PS+G
Sbjct: 703 LNRIDEIIVFHSLDEAHIGQIVSLMAEELRKRLKEQEVDFVLTDAAKAFLAKEGYDPSFG 762
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
ARPLRRAI + +ED L+E +L G I GD++T+D G V+
Sbjct: 763 ARPLRRAIQKHIEDRLSEELLRGNISKGDTLTIDEKDGDLVV 804
>gi|337751755|ref|YP_004645917.1| protein ClpC [Paenibacillus mucilaginosus KNP414]
gi|336302944|gb|AEI46047.1| ClpC [Paenibacillus mucilaginosus KNP414]
Length = 814
Score = 313 bits (802), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 150/282 (53%), Positives = 205/282 (72%), Gaps = 10/282 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RP+ SF+F GPTGVGKTELA ALA FG + +++RIDMSEYMEKH+
Sbjct: 523 AIRRARAGLKDPKRPMGSFIFLGPTGVGKTELARALAESLFGDENSVIRIDMSEYMEKHS 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ G+PPGYVG+E GGQLTE VR +P+SV+L DEIEKAH +V N++LQ+L+DGR+TD
Sbjct: 583 TSRLVGAPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDS 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
KG+TVD +NT+IIMTSN+G VI + S LG M+ V EL++ FRPEF
Sbjct: 643 KGRTVDFRNTLIIMTSNVGADVIKKNSTLGFTATIDAGKEYGNMKDKVMGELKKSFRPEF 702
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNRIDE+IVF L++ + +IV +M +E+ +RL+ + ++ +T K L +EGY+PS+G
Sbjct: 703 LNRIDEIIVFHSLDEAHIGQIVSLMAEELRKRLKEQEVDFVLTDAAKAFLAKEGYDPSFG 762
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
ARPLRRAI + +ED L+E +L G I GD++T+D G V+
Sbjct: 763 ARPLRRAIQKHIEDRLSEELLRGNISKGDTLTIDEKDGDLVV 804
>gi|253315634|ref|ZP_04838847.1| endopeptidase [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
Length = 818
Score = 313 bits (802), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 153/272 (56%), Positives = 199/272 (73%), Gaps = 9/272 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG----SD-----QMERGVAEELRRRFRPEFLNRI 175
TVD +NTIIIMTSN+G + + G SD + + + +EL+ FRPEFLNR+
Sbjct: 646 TVDFRNTIIIMTSNVGAQELQDQRFAGFGGSSDGQDYETIRKTMLKELKNSFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L K +L EIV +M+ ++ RL +N+ + VT K K+ EEGY+P YGARPL
Sbjct: 706 DDIIVFHKLTKEELKEIVTMMVNKLTNRLFEQNINIIVTDKAKDKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RAI + +EDNL+E+IL G G VT+D D
Sbjct: 766 IRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 797
>gi|255282672|ref|ZP_05347227.1| negative regulator of genetic competence ClpC/MecB [Bryantella
formatexigens DSM 14469]
gi|255266693|gb|EET59898.1| ATPase family associated with various cellular activities (AAA)
[Marvinbryantia formatexigens DSM 14469]
Length = 819
Score = 313 bits (802), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 153/279 (54%), Positives = 203/279 (72%), Gaps = 11/279 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R RVG++DP RPI SFLF GPTGVGKTEL+ LA FGS+++M+R+DMSEYMEKH+
Sbjct: 527 AVKRGRVGLKDPARPIGSFLFLGPTGVGKTELSKVLAEVVFGSEQSMIRVDMSEYMEKHS 586
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ GSPPGYVG+E GGQL+E VR P+SVIL DE+EKAH DV N++LQ+LDDG +TD
Sbjct: 587 VSRLVGSPPGYVGYEEGGQLSEKVRRNPYSVILLDEVEKAHPDVFNILLQVLDDGHITDA 646
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
+G+ VD KNTIIIMTSN G I LG ++M+ V EE++R F+PEF
Sbjct: 647 QGRKVDFKNTIIIMTSNAGAQAIVEPKKLGFTAVNDEKQNYERMKGSVMEEVKRLFKPEF 706
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAK-NMELTVTHTFKKKLIEEGYNPSY 230
LNRIDE+IVFR LNK ++ IV ++LK+ ER + + ++ L++ + KK + E+GY+P +
Sbjct: 707 LNRIDEIIVFRSLNKEEIDRIVALLLKDFEERCKKQMDIRLSIGPSVKKFIAEKGYDPKF 766
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
GARPL+RAI +ED LAE IL+G I GD+VT +G
Sbjct: 767 GARPLKRAIQSHVEDALAEEILSGRISAGDAVTARMANG 805
>gi|148658380|ref|YP_001278585.1| ATPase [Roseiflexus sp. RS-1]
gi|148570490|gb|ABQ92635.1| ATPase AAA-2 domain protein [Roseiflexus sp. RS-1]
Length = 871
Score = 313 bits (801), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 150/277 (54%), Positives = 203/277 (73%), Gaps = 2/277 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DPNRP+ SFLF GPTGVGKTELA ALA F ++AM+RIDMSEYMEKHT
Sbjct: 586 AVRRARAGLQDPNRPLGSFLFLGPTGVGKTELARALAEFLFDDEQAMIRIDMSEYMEKHT 645
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG+E GGQLTEAVR +P+SV+LFDE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 646 VARLIGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEVEKAHHDVFNILLQILDDGRLTDG 705
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQ--MERGVAEELRRRFRPEFLNRIDEVI 179
G+ V+ KNT+IIMTSNI I + G+ Q + V EELR + RPEFLNRIDE+I
Sbjct: 706 HGRVVNFKNTVIIMTSNIASPTIQELAQRGASQEIIRASVMEELRAQLRPEFLNRIDEII 765
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VFR L++ Q+ +IVDI L + + L + + L ++ ++KL+ EGY+P +GARPL+R I
Sbjct: 766 VFRPLSRDQIGKIVDIQLNRLRKLLADRKITLDLSPAAREKLVAEGYDPVFGARPLKRVI 825
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYR 276
+ +++ LA +L G + GD++ +D S G+ R
Sbjct: 826 QQRIQNPLALRLLQGEFRDGDTILIDVASDGSFTFER 862
>gi|418954707|ref|ZP_13506663.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-189]
gi|375372472|gb|EHS76212.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-189]
Length = 818
Score = 313 bits (801), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 152/272 (55%), Positives = 198/272 (72%), Gaps = 9/272 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG----SD-----QMERGVAEELRRRFRPEFLNRI 175
TVD +NTIIIMTSN+G + + G SD + + + +EL+ FRPEFLNR+
Sbjct: 646 TVDFRNTIIIMTSNVGAQELQDQRFAGFGGSSDGQDYETIRKTMLKELKNSFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L K +L EIV +M+ ++ RL +N+ + VT K K+ EEGY+P YG RPL
Sbjct: 706 DDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGTRPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RAI + +EDNL+E+IL G G VT+D D
Sbjct: 766 IRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 797
>gi|384546805|ref|YP_005736058.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus aureus subsp. aureus ED133]
gi|416840758|ref|ZP_11903945.1| endopeptidase [Staphylococcus aureus O11]
gi|416846026|ref|ZP_11906369.1| endopeptidase [Staphylococcus aureus O46]
gi|298693856|gb|ADI97078.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus aureus subsp. aureus ED133]
gi|323439794|gb|EGA97511.1| endopeptidase [Staphylococcus aureus O11]
gi|323443104|gb|EGB00724.1| endopeptidase [Staphylococcus aureus O46]
Length = 818
Score = 313 bits (801), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 152/270 (56%), Positives = 198/270 (73%), Gaps = 9/270 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG----SD-----QMERGVAEELRRRFRPEFLNRI 175
TVD +NTIIIMTSN+G + + G SD + + + +EL+ FRPEFLNR+
Sbjct: 646 TVDFRNTIIIMTSNVGAQELQDQRFAGFGGSSDGQDYETIRKTMLKELKNSFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L K +L EIV +M+ ++ RL +N+ + VT K K+ EEGY+P YGARPL
Sbjct: 706 DDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMD 265
RAI + +EDNL+E+IL G G VT+D
Sbjct: 766 IRAIQKTIEDNLSELILDGNQIEGKKVTVD 795
>gi|242372741|ref|ZP_04818315.1| ClpB ATPase [Staphylococcus epidermidis M23864:W1]
gi|242349514|gb|EES41115.1| ClpB ATPase [Staphylococcus epidermidis M23864:W1]
Length = 818
Score = 313 bits (801), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 149/270 (55%), Positives = 199/270 (73%), Gaps = 9/270 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFLNRI 175
TVD +NT+IIMTSN+G + + G + + + + +EL+ FRPEFLNR+
Sbjct: 646 TVDFRNTVIIMTSNVGAQELQDQRFAGFGGASEGNDYETIRKTMMKELKNSFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L+K +L EIV +M+ ++ RL +N+ + VT K+K+ EEGY+P YGARPL
Sbjct: 706 DDIIVFHKLSKEELKEIVTMMVNKLTARLSEQNINIVVTDKAKEKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMD 265
RAI + +EDNL+E+IL G G VT+D
Sbjct: 766 IRAIQKTVEDNLSELILDGNKIEGKEVTID 795
>gi|225377785|ref|ZP_03755006.1| hypothetical protein ROSEINA2194_03436 [Roseburia inulinivorans DSM
16841]
gi|225210369|gb|EEG92723.1| hypothetical protein ROSEINA2194_03436 [Roseburia inulinivorans DSM
16841]
Length = 818
Score = 313 bits (801), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 156/272 (57%), Positives = 198/272 (72%), Gaps = 11/272 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R RVG++DP RPI SFLF GPTGVGKTE++ ALA FG+++AM+R+DMSEYMEKH+
Sbjct: 531 AVRRGRVGLKDPRRPIGSFLFLGPTGVGKTEISKALAEAVFGNEQAMIRVDMSEYMEKHS 590
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG E+GGQL+E VR P+SVILFDEIEKAH DV N++LQ+LDDG +TD
Sbjct: 591 VSKMIGSPPGYVGHEDGGQLSEKVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDS 650
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---SD-------QMERGVAEELRRRFRPEF 171
+G+ VD KNTIIIMTSN G I LG SD +M+ V EE+RR F+PEF
Sbjct: 651 QGRRVDFKNTIIIMTSNAGAQSIVEPKKLGFASSDDEKQNYERMKNSVMEEVRRIFKPEF 710
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAK-NMELTVTHTFKKKLIEEGYNPSY 230
LNRIDE IVFR LNK + +IV +MLK++ +R +++ ++ L V + K ++E+ Y P Y
Sbjct: 711 LNRIDETIVFRSLNKNDMKQIVTLMLKDLTDRCKSQMDITLHVRDSVKNYIVEKAYEPKY 770
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSV 262
GARPLRR I +ED LAE IL G ++ GD V
Sbjct: 771 GARPLRRKIQNEIEDQLAEEILDGKVKKGDEV 802
>gi|153952834|ref|YP_001393599.1| protein ClpC [Clostridium kluyveri DSM 555]
gi|146345715|gb|EDK32251.1| ClpC [Clostridium kluyveri DSM 555]
Length = 812
Score = 313 bits (801), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 149/270 (55%), Positives = 201/270 (74%), Gaps = 12/270 (4%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
R+RVG++DP RPI SF+F GPTGVGKTEL+ ALA FG + ++RIDMSEYMEKHTVSK
Sbjct: 528 RSRVGLKDPKRPIGSFIFLGPTGVGKTELSKALAEAMFGDENNLIRIDMSEYMEKHTVSK 587
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPGYVG++ GGQLTE VR P+SV+LFDEIEKAH +V N++LQ+L+DGR+TDGKG+
Sbjct: 588 LIGSPPGYVGYDEGGQLTEKVRRNPYSVVLFDEIEKAHPEVFNILLQILEDGRLTDGKGK 647
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG------------SDQMERGVAEELRRRFRPEFL 172
T++ KNTIIIMTSN+G S I ++ +G D+M+ + EEL+ FRPEFL
Sbjct: 648 TINFKNTIIIMTSNVGVSTIKKQKSMGFTIVSDNEKQDEYDKMKDNIMEELKTSFRPEFL 707
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRID++IVF QL + L +IV IML ++ RL+ K++++ ++ L +EG++ +YGA
Sbjct: 708 NRIDDIIVFHQLQEDDLKQIVKIMLNDVSMRLKEKDIDINFNEKAQELLAKEGFDITYGA 767
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSV 262
RPLRRAI + +ED L+E +L G ++ GD V
Sbjct: 768 RPLRRAITKTVEDKLSEEMLKGNVKRGDKV 797
>gi|163846611|ref|YP_001634655.1| ATPase [Chloroflexus aurantiacus J-10-fl]
gi|222524408|ref|YP_002568879.1| ATPase AAA-2 domain-containing protein [Chloroflexus sp. Y-400-fl]
gi|163667900|gb|ABY34266.1| ATPase AAA-2 domain protein [Chloroflexus aurantiacus J-10-fl]
gi|222448287|gb|ACM52553.1| ATPase AAA-2 domain protein [Chloroflexus sp. Y-400-fl]
Length = 826
Score = 313 bits (801), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 154/294 (52%), Positives = 204/294 (69%), Gaps = 14/294 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G+RDP RPI SFLF GPTGVGKTELA ALA F S+EAM R+DMSEY E+HT
Sbjct: 525 AIRRARSGLRDPRRPIGSFLFVGPTGVGKTELARALAEFMFDSEEAMTRVDMSEYQERHT 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTE++R RP+ V+LFDEIEKAHRDV N +LQ+LDDGR+TDG
Sbjct: 585 VSRLIGAPPGYVGYDEGGQLTESIRRRPYQVVLFDEIEKAHRDVFNALLQVLDDGRLTDG 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARE-----------SILGSDQMERGVAEELRRRFRPE 170
+G+TVD +NTIIIMTSN G + + + + V E LR+ FRPE
Sbjct: 645 QGRTVDFRNTIIIMTSNAGTEHLQGGGIGFNVGGKNAKTIDMREARKKVDEALRQTFRPE 704
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNRIDE+I+F L+ L IV++ + ++ ERL + + L++T K+ L++EGYNP +
Sbjct: 705 FLNRIDEIILFHPLSMDDLTRIVELQIADLVERLREQQIGLSLTQAAKEYLVQEGYNPVF 764
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMTV 284
GARPLRR I RLLE ++ +L G + GD + +D ++G V HR G +T+
Sbjct: 765 GARPLRRTIQRLLETPISRELLRGMFRAGDQIEVDVENGQLVF---HRGGILTM 815
>gi|409990893|ref|ZP_11274211.1| ATPase [Arthrospira platensis str. Paraca]
gi|291570318|dbj|BAI92590.1| ClpB protein [Arthrospira platensis NIES-39]
gi|409938252|gb|EKN79598.1| ATPase [Arthrospira platensis str. Paraca]
Length = 872
Score = 313 bits (801), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 153/271 (56%), Positives = 200/271 (73%), Gaps = 6/271 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+++R+R G+ DPNRP++SF+F GPTGVGKTELA ALA F ++EA+VRIDMSEYMEKH+
Sbjct: 589 SIQRSRAGLSDPNRPVASFIFLGPTGVGKTELAKALASYLFDTEEAIVRIDMSEYMEKHS 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+++GGQLTEA+R RP++VILFDEIEKAH DV NVMLQ+LDDGRVTD
Sbjct: 649 VSRLLGAPPGYVGYDDGGQLTEAIRRRPYAVILFDEIEKAHPDVFNVMLQILDDGRVTDS 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD----QMERGVAEELRRRFRPEFLNRIDE 177
+G+TVD KNTIIIMTSNIG I I G D +M V + +R FRPEFLNRIDE
Sbjct: 709 QGRTVDFKNTIIIMTSNIGSQYIL--DIAGDDSRYEEMRHRVMDSMRSAFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+F L QL EIV + L + +RLE M L ++ + L + G++P YGARPL+R
Sbjct: 767 IIIFHSLKPHQLREIVLLQLGNLSQRLEQHKMSLKLSESALDYLADVGFDPVYGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDS 268
AI + LE +A+ IL G G+++ +D ++
Sbjct: 827 AIQQELETQIAKGILRGEFNDGNTIYVDVEN 857
>gi|423065707|ref|ZP_17054497.1| ATP-dependent chaperone ClpB [Arthrospira platensis C1]
gi|406712761|gb|EKD07940.1| ATP-dependent chaperone ClpB [Arthrospira platensis C1]
Length = 872
Score = 312 bits (800), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 153/271 (56%), Positives = 198/271 (73%), Gaps = 6/271 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+++R+R G+ DPNRP++SF+F GPTGVGKTELA ALA F ++EA+VR+DMSEYMEKH+
Sbjct: 589 SIQRSRAGLSDPNRPVASFIFLGPTGVGKTELAKALASYLFDTEEAIVRVDMSEYMEKHS 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTEA+R RP++VILFDEIEKAH DV NVMLQ+LDDGRVTD
Sbjct: 649 VSRLLGAPPGYVGYDEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNVMLQILDDGRVTDA 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD----QMERGVAEELRRRFRPEFLNRIDE 177
+G+TVD KNTIIIMTSNIG I I G D +M V + +R FRPEFLNRIDE
Sbjct: 709 QGRTVDFKNTIIIMTSNIGSQYIL--DIAGDDSRYEEMRHRVMDSMRSAFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+F L QL EIV + L + RLE M L ++ + L + G++P YGARPL+R
Sbjct: 767 IIIFHSLKPHQLREIVRLQLVNLSRRLEQHKMSLKLSESALDYLADVGFDPVYGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDS 268
AI R LE +A+ IL G G+++ +D ++
Sbjct: 827 AIQRELETQIAKGILRGEFNDGNTIYVDVEN 857
>gi|434392140|ref|YP_007127087.1| ATP-dependent chaperone ClpB [Gloeocapsa sp. PCC 7428]
gi|428263981|gb|AFZ29927.1| ATP-dependent chaperone ClpB [Gloeocapsa sp. PCC 7428]
Length = 872
Score = 312 bits (800), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 153/271 (56%), Positives = 195/271 (71%), Gaps = 6/271 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRP +SF+F GPTGVGKTELA ALA F ++EAMVRIDMSEYMEKH
Sbjct: 589 AIARSRAGLADPNRPTASFIFLGPTGVGKTELAKALAAYLFDTEEAMVRIDMSEYMEKHA 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTEA+R RP++V+LFDEIEKAH DV NVMLQ+LDDGRVTD
Sbjct: 649 VSRLIGAPPGYVGYDEGGQLTEAIRRRPYAVVLFDEIEKAHPDVFNVMLQILDDGRVTDA 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD----QMERGVAEELRRRFRPEFLNRIDE 177
+G TVD KNTIIIMTSNIG I I G D +M V + +R FRPEFLNRIDE
Sbjct: 709 QGHTVDFKNTIIIMTSNIGSQYIL--DIAGDDSRYEEMRSRVMDAMRNSFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+F L K +L IV + ++ + +RL + M L +++ L E GY+P +GARPL+R
Sbjct: 767 IIIFHALQKQELRHIVQLQVQRLEKRLAERKMSLKLSNAALDFLAEVGYDPVFGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDS 268
AI R LE +A+ IL G GD++ +D ++
Sbjct: 827 AIQRELETQIAKSILRGEFNDGDTIYVDVEN 857
>gi|78043878|ref|YP_361153.1| negative regulator of genetic competence clpC/mecB
[Carboxydothermus hydrogenoformans Z-2901]
gi|77995993|gb|ABB14892.1| negative regulator of genetic competence clpC/mecB
[Carboxydothermus hydrogenoformans Z-2901]
Length = 811
Score = 312 bits (800), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 150/270 (55%), Positives = 204/270 (75%), Gaps = 9/270 (3%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTGVGKTELA ALA FG ++A++RIDMSEYMEKHTV++ G+
Sbjct: 535 GLKDPKRPIGSFIFLGPTGVGKTELARALAEALFGDEDALIRIDMSEYMEKHTVARLIGA 594
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG+E GGQLTEAVR +P+SVIL DEIEKAH +V N++LQ+L+DGR+TD KG+TVD
Sbjct: 595 PPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQVLEDGRLTDSKGRTVDF 654
Query: 129 KNTIIIMTSNIGDSVIARESILGSDQM---------ERGVAEELRRRFRPEFLNRIDEVI 179
KNT+IIMTSNIG +I +E+ LG + + + EL+R FRPEFLNRIDE+I
Sbjct: 655 KNTVIIMTSNIGAHLIKKEARLGFKNVADEKKEEDIKEKLMAELKRTFRPEFLNRIDEII 714
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF L + L +IV +MLKE+ +RLE + M++ + + +++EGY+ ++GARPLRRAI
Sbjct: 715 VFHSLTEEHLKQIVRLMLKEVGKRLEEQEMKVEFDDSLIEVILKEGYDEAFGARPLRRAI 774
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
+++ED L+E +L G I+ GD+V + + G
Sbjct: 775 QKIVEDKLSEELLLGNIKKGDTVKLYAEDG 804
>gi|357420234|ref|YP_004933226.1| ATPase AAA [Thermovirga lienii DSM 17291]
gi|355397700|gb|AER67129.1| ATPase AAA-2 domain protein [Thermovirga lienii DSM 17291]
Length = 820
Score = 312 bits (800), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 144/271 (53%), Positives = 202/271 (74%), Gaps = 10/271 (3%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SFLF GPTGVGKTELA +LA FGS++AMVR DMSEYME+H V+K G+
Sbjct: 540 GLKDPKRPIGSFLFLGPTGVGKTELARSLAEFLFGSEDAMVRFDMSEYMERHEVAKLIGA 599
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG+E GG+LTEA+R RP+SV+LFDEIEKAH DV N++LQ+L+DGR+TDG+G TVD
Sbjct: 600 PPGYVGYEEGGKLTEALRRRPYSVVLFDEIEKAHPDVFNILLQILEDGRLTDGQGHTVDF 659
Query: 129 KNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEFLNRIDEV 178
+N++I+MTSN+G + + LG ++M+ + E LR+ FRPEFLNR+D++
Sbjct: 660 RNSVIVMTSNVGAQDLMKTRSLGFSTSAEESFDLNKMKGSIMEALRKTFRPEFLNRVDDI 719
Query: 179 IVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRA 238
I+F+ L + +L++I+DIMLKE+ RL+ + +E+ V K L+E+GY+P YGARPLRR
Sbjct: 720 IIFKPLGREELLQILDIMLKEVETRLKEQGVEIVVPDETKAFLLEQGYDPKYGARPLRRT 779
Query: 239 IGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
+ R++ED +A+++L G I G + + G
Sbjct: 780 LQRMVEDKMADMLLEGKISKGSKIEIVVSDG 810
>gi|219853499|ref|YP_002470621.1| hypothetical protein CKR_0156 [Clostridium kluyveri NBRC 12016]
gi|219567223|dbj|BAH05207.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 816
Score = 312 bits (800), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 149/270 (55%), Positives = 201/270 (74%), Gaps = 12/270 (4%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
R+RVG++DP RPI SF+F GPTGVGKTEL+ ALA FG + ++RIDMSEYMEKHTVSK
Sbjct: 532 RSRVGLKDPKRPIGSFIFLGPTGVGKTELSKALAEAMFGDENNLIRIDMSEYMEKHTVSK 591
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPGYVG++ GGQLTE VR P+SV+LFDEIEKAH +V N++LQ+L+DGR+TDGKG+
Sbjct: 592 LIGSPPGYVGYDEGGQLTEKVRRNPYSVVLFDEIEKAHPEVFNILLQILEDGRLTDGKGK 651
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG------------SDQMERGVAEELRRRFRPEFL 172
T++ KNTIIIMTSN+G S I ++ +G D+M+ + EEL+ FRPEFL
Sbjct: 652 TINFKNTIIIMTSNVGVSTIKKQKSMGFTIVSDNEKQDEYDKMKDNIMEELKTSFRPEFL 711
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRID++IVF QL + L +IV IML ++ RL+ K++++ ++ L +EG++ +YGA
Sbjct: 712 NRIDDIIVFHQLQEDDLKQIVKIMLNDVSMRLKEKDIDINFNEKAQELLAKEGFDITYGA 771
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSV 262
RPLRRAI + +ED L+E +L G ++ GD V
Sbjct: 772 RPLRRAITKTVEDKLSEEMLKGNVKRGDKV 801
>gi|410461714|ref|ZP_11315360.1| Class III stress response-related ATPase, ClpC [Bacillus
azotoformans LMG 9581]
gi|409925481|gb|EKN62692.1| Class III stress response-related ATPase, ClpC [Bacillus
azotoformans LMG 9581]
Length = 807
Score = 312 bits (800), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 148/280 (52%), Positives = 202/280 (72%), Gaps = 8/280 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++A++RIDMSEYMEKHT
Sbjct: 525 AIRRARSGLKDPKRPIGSFIFLGPTGVGKTELARALAEAMFGDEDALIRIDMSEYMEKHT 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG E GGQLTE VR +P SVIL DEIEKAH +V N++LQ+L+DGR+TD
Sbjct: 585 TSRLVGSPPGYVGHEEGGQLTEKVRRKPFSVILLDEIEKAHPEVFNILLQVLEDGRLTDS 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD--------QMERGVAEELRRRFRPEFLN 173
KG+TVD +NTI+IMTSN+G S + R +G + M+ V + L++ FRPEFLN
Sbjct: 645 KGRTVDFRNTIVIMTSNVGASELKRNKYVGFNVQEGQEYKDMKSKVMDALKKAFRPEFLN 704
Query: 174 RIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGAR 233
RIDE+IVF L K + EI+ +M E+ +RL+ ++++ ++ K+K+ EG++P YGAR
Sbjct: 705 RIDEIIVFHSLEKQHINEIITLMANELTKRLKEQDIDFALSDAAKEKIANEGFDPEYGAR 764
Query: 234 PLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
PLRRA+ + +ED L+E +L G IQ G + +D ++ V+
Sbjct: 765 PLRRALQKQVEDRLSEELLKGTIQKGHKIIIDVENDDYVV 804
>gi|75812792|ref|YP_320409.1| ATPase [Anabaena variabilis ATCC 29413]
gi|75705548|gb|ABA25220.1| ATPase [Anabaena variabilis ATCC 29413]
Length = 873
Score = 312 bits (800), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 152/270 (56%), Positives = 197/270 (72%), Gaps = 6/270 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRPI+SF+F GPTGVGKTELA ALA F +++A+VRIDMSEYMEKHT
Sbjct: 590 AIQRSRAGLADPNRPIASFIFLGPTGVGKTELAKALAVYLFDTEDALVRIDMSEYMEKHT 649
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG+E GGQLTEA+R RP+SVILFDEIEKAH DV NV+LQ+LDDGR+TD
Sbjct: 650 VARLIGAPPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHPDVFNVLLQILDDGRLTDS 709
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD----QMERGVAEELRRRFRPEFLNRIDE 177
+G+TVD KNTI IMTSNIG I + G D QM V E +R FRPEFLNRIDE
Sbjct: 710 QGRTVDFKNTIAIMTSNIGSIYIL--DVAGDDSKYEQMRDRVMEAVRESFRPEFLNRIDE 767
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+F L K +L EIV + ++ + ERL + + L ++ +++ GY+P YGARPL+R
Sbjct: 768 IIIFHSLRKDELREIVKLQVQRLEERLRERKLSLKISDEALNWIVQVGYDPVYGARPLKR 827
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
AI R LE +A+ IL G GD++ + +
Sbjct: 828 AIQRELETPIAKAILRGEFHEGDTIYVHVE 857
>gi|320354684|ref|YP_004196023.1| ATP-dependent chaperone ClpB [Desulfobulbus propionicus DSM 2032]
gi|320123186|gb|ADW18732.1| ATP-dependent chaperone ClpB [Desulfobulbus propionicus DSM 2032]
Length = 863
Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 148/261 (56%), Positives = 197/261 (75%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP+RP+ SF+F GPTGVGKTELA +LA F S++AM+RIDMSEYMEKH+V++
Sbjct: 591 RARAGLQDPDRPLGSFIFLGPTGVGKTELARSLAEFLFDSEQAMIRIDMSEYMEKHSVAR 650
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG++ GG LTEAVR RP++VIL DEIEKAH DV NV+LQ+LDDGR+TDGKG+
Sbjct: 651 LIGAPPGYVGYDEGGMLTEAVRRRPYAVILLDEIEKAHPDVFNVLLQVLDDGRMTDGKGR 710
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVFRQL 184
TVD KNTI+IMTSN+G +I + + M R + + L R+F+PEFLNRIDE+I F L
Sbjct: 711 TVDFKNTILIMTSNLGSHIIMEMAQTDPETMRRQIDDLLHRQFKPEFLNRIDEIITFHGL 770
Query: 185 NKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGRLLE 244
+ L +IVDI +K + +RL ++T+T K+ L++ GY+P++GARPL+RAI R +E
Sbjct: 771 TRDNLSQIVDIQIKRMAKRLAEHKYKVTLTKEAKQFLVDTGYDPAFGARPLKRAIQRYIE 830
Query: 245 DNLAEIILTGYIQVGDSVTMD 265
D LA IL G GD + +D
Sbjct: 831 DPLALEILEGNFAEGDHILID 851
>gi|434404939|ref|YP_007147824.1| ATP-dependent chaperone ClpB [Cylindrospermum stagnale PCC 7417]
gi|428259194|gb|AFZ25144.1| ATP-dependent chaperone ClpB [Cylindrospermum stagnale PCC 7417]
Length = 895
Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 154/269 (57%), Positives = 194/269 (72%), Gaps = 6/269 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRPI+SF+F GPTGVGKTELA ALA F ++E++VRIDMSEYMEKHT
Sbjct: 612 AIQRSRAGLADPNRPIASFVFLGPTGVGKTELAKALAAYMFDTEESLVRIDMSEYMEKHT 671
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEA+R RP++VILFDEIEKAH DV N+ LQ+LDDGRVTD
Sbjct: 672 VSRLIGAPPGYVGYEEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNIFLQILDDGRVTDA 731
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS----DQMERGVAEELRRRFRPEFLNRIDE 177
+G TVD KN IIIMTSNIG I I G D+M R V E +R FRPEFLNRIDE
Sbjct: 732 QGHTVDFKNCIIIMTSNIGSQYIL--DIAGDDSRYDEMHRRVMEAMRNSFRPEFLNRIDE 789
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+F L K +L IV + ++ + +RL + M L ++ L E GY+P +GARPL+R
Sbjct: 790 IIIFHSLQKSELRRIVLLQVERLRQRLSDRKMSLRLSDAALDFLAEVGYDPVFGARPLKR 849
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
AI R LE +A+ IL G GD++ +D
Sbjct: 850 AIQRELETQIAKAILRGEFNDGDTIFVDV 878
>gi|228475267|ref|ZP_04059992.1| negative regulator of genetic competence ClpC/mecB [Staphylococcus
hominis SK119]
gi|228270732|gb|EEK12141.1| negative regulator of genetic competence ClpC/mecB [Staphylococcus
hominis SK119]
Length = 823
Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 151/280 (53%), Positives = 203/280 (72%), Gaps = 11/280 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEEDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFLNRI 175
VD +NT+IIMTSN+G + + G + + + + +EL+ FRPEFLNR+
Sbjct: 646 QVDFRNTVIIMTSNVGAQELQDQRFAGFGGASEGQDYETIRKTMMKELKNSFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L K +L EIV +M+ ++ +RL +++ + VT K+K+ EEGY+P YGARPL
Sbjct: 706 DDIIVFHKLTKDELKEIVTMMVNKLTKRLSEQDINIVVTDKAKEKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMY 275
RAI + +EDNL+E+IL G G VT+D D GN Y
Sbjct: 766 IRAIQKTVEDNLSELILDGNQIEGKEVTIDHD--GNEFKY 803
>gi|407783886|ref|ZP_11131078.1| ATP-dependent Clp protease ATP-binding subunit [Oceanibaculum
indicum P24]
gi|407199417|gb|EKE69436.1| ATP-dependent Clp protease ATP-binding subunit [Oceanibaculum
indicum P24]
Length = 865
Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 151/270 (55%), Positives = 199/270 (73%), Gaps = 3/270 (1%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DPNRPI SFLF GPTGVGKTEL ALA F ++AMVRIDMSEYMEKH
Sbjct: 583 AIRRARAGLQDPNRPIGSFLFLGPTGVGKTELTKALAEFLFDDEQAMVRIDMSEYMEKHA 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR RP+ VILFDE+EKAH DV NV+LQ+LDDGR+TDG
Sbjct: 643 VSRLIGAPPGYVGYEEGGALTEAVRRRPYQVILFDEVEKAHPDVFNVLLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD--QMERGVAEELRRRFRPEFLNRIDEVI 179
+G+TVD +NT+IIMTSN+G ++A ++ G+D M V E +R FRPEFLNR+D+++
Sbjct: 703 QGRTVDFRNTLIIMTSNLGSEIMASDAS-GADVESMRAAVMEVVRAAFRPEFLNRLDDIL 761
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
+F +L + + IV++ L +Y+ LE +N+ L ++ K L + GY+P YGARPL+R I
Sbjct: 762 LFHRLTRENMTGIVEVQLGRLYKLLEDRNIALDLSDAAKAWLGDAGYDPVYGARPLKRVI 821
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
R L++ LA +IL G I GD V +D + G
Sbjct: 822 QRELQNPLATMILEGSIHDGDRVKVDVEDG 851
>gi|259047337|ref|ZP_05737738.1| negative regulator of genetic competence ClpC/MecB [Granulicatella
adiacens ATCC 49175]
gi|259036033|gb|EEW37288.1| negative regulator of genetic competence ClpC/MecB [Granulicatella
adiacens ATCC 49175]
Length = 825
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 152/281 (54%), Positives = 198/281 (70%), Gaps = 9/281 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++ RAR G++DP RPI SFLF G TGVGKTELA LA FG ++A+VRIDMSEYMEKH
Sbjct: 531 SIRRARSGLKDPKRPIGSFLFLGSTGVGKTELAKTLAEAMFGDQDALVRIDMSEYMEKHA 590
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ GSPPGYVGF+ GGQLTE +R++P+SVIL DEIEKAH DV N++LQ+LDDG +TD
Sbjct: 591 VSRLVGSPPGYVGFDEGGQLTEKIRNKPYSVILLDEIEKAHPDVFNILLQVLDDGHLTDS 650
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+ VD +NTI+IMTSN+G + + E +G ME+ + EEL+ FRPE L
Sbjct: 651 KGRKVDFRNTILIMTSNLGATALRDEKSVGFGAKTVQHDHAAMEKRIREELKNAFRPELL 710
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE+IVF +L K +L +IV +M K+I RL N+EL T + EEG++P YGA
Sbjct: 711 NRIDEIIVFHKLTKPELRQIVQLMTKDIKTRLAELNIELKFTSGVIDLIAEEGFDPEYGA 770
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
RP+RRAI + +ED L+E +L+G ++ G VT+ G I
Sbjct: 771 RPIRRAIQKKIEDPLSEALLSGEVRFGQKVTIGSQKGKVTI 811
>gi|427391054|ref|ZP_18885460.1| ATP-dependent chaperone ClpB [Actinobaculum massiliae
ACS-171-V-Col2]
gi|425732392|gb|EKU95202.1| ATP-dependent chaperone ClpB [Actinobaculum massiliae
ACS-171-V-Col2]
Length = 921
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 148/266 (55%), Positives = 198/266 (74%), Gaps = 1/266 (0%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
R+R G+ DPNRP SF+F GPTGVGKTELA ALA F + AMVRIDMSEY EKHTVS+
Sbjct: 597 RSRAGVADPNRPDGSFMFLGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYAEKHTVSR 656
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPGYVG+E GGQLTEAVR RP+SVIL DE+EKAH DV +V+LQ+LDDGR+TDG+G+
Sbjct: 657 LIGSPPGYVGYEEGGQLTEAVRRRPYSVILLDEVEKAHPDVFDVLLQVLDDGRLTDGQGR 716
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVFRQL 184
TVD +NTI++MTSN+G + +A + L +Q + V E+R F+PEFLNR+D++++FR L
Sbjct: 717 TVDFRNTILVMTSNLGSAALANPA-LADEQKDDAVMAEVRGHFKPEFLNRLDDIVIFRPL 775
Query: 185 NKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGRLLE 244
+ Q+ +IVD+ + ++ RL + + L VT ++ L +GY+P+YGARPLRR I R +
Sbjct: 776 SMEQIGQIVDLQVSQLERRLAERRIHLDVTPAAREYLTLDGYDPAYGARPLRRLIQREIG 835
Query: 245 DNLAEIILTGYIQVGDSVTMDCDSGG 270
D LA IL G+++ GD+V +D G
Sbjct: 836 DQLAREILAGHVEDGDTVRVDLPEPG 861
>gi|304405673|ref|ZP_07387332.1| ATPase AAA-2 domain protein [Paenibacillus curdlanolyticus YK9]
gi|304345712|gb|EFM11547.1| ATPase AAA-2 domain protein [Paenibacillus curdlanolyticus YK9]
Length = 822
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 153/295 (51%), Positives = 206/295 (69%), Gaps = 13/295 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FG + A++RIDMSEYMEKH+
Sbjct: 523 AIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESIFGDENAVIRIDMSEYMEKHS 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ G+PPGYVG+E GGQLTE VR +P+SV+L DEIEKAH +V N++LQ+L+DGR+TD
Sbjct: 583 TSRLVGAPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDS 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD----------QMERGVAEELRRRFRPEF 171
KG+ VD +NT+IIMTSN+G I R S LG QM+ V EL++ FRPEF
Sbjct: 643 KGRVVDFRNTLIIMTSNVGADQIKRNSTLGFTAVQDSGREFIQMKDKVMGELKKSFRPEF 702
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNRIDE IVF L + + +IV +M +E+ +RL+ + ++ ++T K L +EG++P YG
Sbjct: 703 LNRIDETIVFHSLEQEHIAQIVTLMSEELRKRLKEQEVDFSLTEAAKNFLAKEGFDPQYG 762
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMTVCA 286
ARPLRRAI + +ED L+E +L G I GD++ +D G V+ HR+ + A
Sbjct: 763 ARPLRRAIQKHIEDRLSEDLLMGTITKGDTLLIDEKDGALVV---HRSSAEPEAA 814
>gi|312135577|ref|YP_004002915.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
owensensis OL]
gi|311775628|gb|ADQ05115.1| ATPase AAA-2 domain protein [Caldicellulosiruptor owensensis OL]
Length = 829
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 151/293 (51%), Positives = 207/293 (70%), Gaps = 11/293 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R RVG++DP RPI SF+F GPTGVGKTELA ALA FG+++A++RIDMSEYMEK
Sbjct: 530 AIRRGRVGLKDPKRPIGSFIFLGPTGVGKTELARALAEALFGTEDALIRIDMSEYMEKFN 589
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+E GGQLTE VR RP+SV+LFDEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 590 VSKLIGSPPGYVGYEEGGQLTEKVRRRPYSVVLFDEIEKAHPDVFNLLLQILDDGRLTDS 649
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG-----------SDQMERGVAEELRRRFRPE 170
+G+TV +NT+IIMTSNIG ++I LG ++++ V EL++ FRPE
Sbjct: 650 QGRTVSFRNTVIIMTSNIGANLITNPKKLGFSTSEDEKQKTYERIKENVMNELKKTFRPE 709
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNRIDE+IVF L++ + +IV+IMLK + ER++A T + + ++G++P +
Sbjct: 710 FLNRIDEIIVFHPLDEEDVKKIVEIMLKNLQERIKASEYYAEFTPALVEAIAKKGFDPVF 769
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMT 283
GARPL+RAI ++ED ++E IL G I+ GD +D G VI+ + + + +
Sbjct: 770 GARPLKRAIQSMVEDKISEAILEGKIKQGDEFIVDFVEGNTVIIKKEKASTSS 822
>gi|427714065|ref|YP_007062689.1| ATP-dependent chaperone ClpB [Synechococcus sp. PCC 6312]
gi|427378194|gb|AFY62146.1| ATP-dependent chaperone ClpB [Synechococcus sp. PCC 6312]
Length = 873
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 153/267 (57%), Positives = 193/267 (72%), Gaps = 6/267 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRPI+SF+F GPTGVGKTELA ALA F ++EAMVRIDMSEYMEKH
Sbjct: 589 AIQRSRAGLSDPNRPIASFIFLGPTGVGKTELAKALAAYLFDTEEAMVRIDMSEYMEKHA 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTEA+R RP++V+LFDEIEKAH DV NV LQ+LDDGRVTD
Sbjct: 649 VSRLIGAPPGYVGYDEGGQLTEAIRRRPYAVVLFDEIEKAHPDVFNVFLQILDDGRVTDA 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD----QMERGVAEELRRRFRPEFLNRIDE 177
+G+TVD KNTI+IMTSNIG I + G D +M V E +R FRPEFLNR+DE
Sbjct: 709 QGRTVDFKNTILIMTSNIGSQYIL--DVAGDDSRYGEMRERVMEAMRTHFRPEFLNRVDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
I+F L K QL EI+ I ++ + RL+ + M L +T L E GY+P YGARPL+R
Sbjct: 767 FIIFHSLKKAQLREIIKIQVQRLETRLQDRKMSLNLTPEALDFLAEVGYDPVYGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTM 264
AI + LE +A+ IL G GD++ +
Sbjct: 827 AIQQQLETQIAKGILRGDYHDGDTIQV 853
>gi|418619636|ref|ZP_13182459.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
hominis VCU122]
gi|374824202|gb|EHR88173.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
hominis VCU122]
Length = 823
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 151/280 (53%), Positives = 203/280 (72%), Gaps = 11/280 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEEDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFLNRI 175
VD +NT+IIMTSN+G + + G + + + + +EL+ FRPEFLNR+
Sbjct: 646 QVDFRNTVIIMTSNVGAQELQDQRFAGFGGASEGQDYETIRKTMMKELKNSFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L K +L EIV +M+ ++ +RL +++ + VT K+K+ EEGY+P YGARPL
Sbjct: 706 DDIIVFHKLTKDELKEIVTMMVNKLTKRLSEQDINIVVTDKAKEKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMY 275
RAI + +EDNL+E+IL G G VT+D D GN Y
Sbjct: 766 IRAIQKTVEDNLSELILDGNQIEGKEVTIDHD--GNEFKY 803
>gi|417643008|ref|ZP_12293079.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
warneri VCU121]
gi|445060498|ref|YP_007385902.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus warneri SG1]
gi|330686262|gb|EGG97874.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU121]
gi|443426555|gb|AGC91458.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus warneri SG1]
Length = 817
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 149/272 (54%), Positives = 199/272 (73%), Gaps = 9/272 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFLNRI 175
VD +NT+IIMTSN+G + + G + + + + +EL+ FRPEFLNR+
Sbjct: 646 QVDFRNTVIIMTSNVGAQELQDQRFAGFGGADDGQDYESIRKTMMKELKNAFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L+K +L EIV +M+ ++ RL +N+ + VT K+K+ EEGY+P YGARPL
Sbjct: 706 DDIIVFHKLSKEELKEIVTMMVNKLTLRLSEQNINIKVTEKAKEKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RAI + +EDNL+E+IL G G VT+D D
Sbjct: 766 IRAIQKTVEDNLSELILDGNQLEGKEVTVDHD 797
>gi|427732092|ref|YP_007078329.1| ATP-dependent chaperone ClpB [Nostoc sp. PCC 7524]
gi|427368011|gb|AFY50732.1| ATP-dependent chaperone ClpB [Nostoc sp. PCC 7524]
Length = 872
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 153/269 (56%), Positives = 195/269 (72%), Gaps = 6/269 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRPI+SF+F GPTGVGKTELA ALA F ++EA+VRIDMSEYMEKH
Sbjct: 589 AIQRSRAGLADPNRPIASFVFLGPTGVGKTELAKALAAYMFDTEEALVRIDMSEYMEKHA 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEA+R RP++VILFDEIEKAH DV N+ LQ+LDDGRVTD
Sbjct: 649 VSRLIGAPPGYVGYEEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNIFLQILDDGRVTDA 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS----DQMERGVAEELRRRFRPEFLNRIDE 177
+G TVD KNTIIIMTSNIG I + G D+M V E +R FRPEFLNRIDE
Sbjct: 709 QGHTVDFKNTIIIMTSNIGSQYIL--DVAGDDSRYDEMRHRVMEAMRNSFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+F L+K +L +IV + ++ + +RL + M L ++ L E GY+P +GARPL+R
Sbjct: 767 IIIFHGLDKKELRQIVQLQVERLRDRLGDRKMSLRLSEAALDFLAEVGYDPVFGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
AI R LE +A+ IL G GD++ +D
Sbjct: 827 AIQRELETQIAKAILRGEFNDGDTIFVDV 855
>gi|384440211|ref|YP_005654935.1| hypothetical protein [Thermus sp. CCB_US3_UF1]
gi|359291344|gb|AEV16861.1| hypothetical protein TCCBUS3UF1_18220 [Thermus sp. CCB_US3_UF1]
Length = 854
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 158/281 (56%), Positives = 197/281 (70%), Gaps = 6/281 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SFLF GPTGVGKTELA LA F ++EAMVRIDM+EYMEKH
Sbjct: 573 AIRRARAGLKDPGRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMVRIDMTEYMEKHA 632
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEAVR RP++VILFDEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 633 VSRLIGAPPGYVGYEEGGQLTEAVRRRPYTVILFDEIEKAHPDVFNLLLQILDDGRLTDS 692
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEE----LRRRFRPEFLNRIDE 177
G+TVD +NT+II+TSN+G +I E I ER + EE L+R FRPEFLNR+DE
Sbjct: 693 HGRTVDFRNTVIILTSNLGSPIIL-EGIQKGWPYER-IREEVFAILQRHFRPEFLNRLDE 750
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
++VFR L + QL IV+I L ++ RL K + L +T K L E G++P +GARPL+R
Sbjct: 751 IVVFRPLTREQLRAIVEIQLAQLRARLAEKRIALELTEAAKDFLAERGFDPVFGARPLKR 810
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHR 278
IGR LE LA+ IL G I G V +D G + R
Sbjct: 811 VIGRELETPLAKRILAGEIVEGSRVVVDAGPAGLIFRSEER 851
>gi|314937170|ref|ZP_07844517.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
hominis subsp. hominis C80]
gi|313655789|gb|EFS19534.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
hominis subsp. hominis C80]
Length = 823
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 151/280 (53%), Positives = 203/280 (72%), Gaps = 11/280 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEEDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFLNRI 175
VD +NT+IIMTSN+G + + G + + + + +EL+ FRPEFLNR+
Sbjct: 646 QVDFRNTVIIMTSNVGAQELQDQRFAGFGGASEGQDYETIRKTMMKELKNSFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L K +L EIV +M+ ++ +RL +++ + VT K+K+ EEGY+P YGARPL
Sbjct: 706 DDIIVFHKLTKDELKEIVTMMVNKLTKRLSEQDINIVVTDKAKEKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMY 275
RAI + +EDNL+E+IL G G VT+D D GN Y
Sbjct: 766 IRAIQKTVEDNLSELILDGNQIEGKEVTIDHD--GNEFKY 803
>gi|78212541|ref|YP_381320.1| ATPase [Synechococcus sp. CC9605]
gi|78197000|gb|ABB34765.1| ATPase [Synechococcus sp. CC9605]
Length = 862
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 149/270 (55%), Positives = 197/270 (72%), Gaps = 6/270 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRPI+SFLF GPTGVGKTEL+ ALA F S +AMVRIDMSEYMEKHT
Sbjct: 588 AIQRSRAGLSDPNRPIASFLFLGPTGVGKTELSKALANRLFDSDDAMVRIDMSEYMEKHT 647
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEAVR RP++VILFDE+EKAH DV NVMLQ+LDDGRVTDG
Sbjct: 648 VSRLIGAPPGYVGYEAGGQLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDG 707
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMERG----VAEELRRRFRPEFLNRIDE 177
+G+TVD NT++I+TSNIG I + G + R V E LR FRPEFLNR+D+
Sbjct: 708 QGRTVDFTNTVLILTSNIGSQSIL--ELAGDPEQHRATESRVNEALRAHFRPEFLNRLDD 765
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
I+F L + +L +IV + ++ + +RL + +EL+++ L GY+P YGARPL+R
Sbjct: 766 QIIFHSLRRAELRQIVTLQVERLRQRLAERKLELSLSDGAADWLASAGYDPVYGARPLKR 825
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
A+ R LE +A++IL+G + ++ +D D
Sbjct: 826 AVQRELETPIAKLILSGRLGENSAIAVDVD 855
>gi|222529809|ref|YP_002573691.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor bescii
DSM 6725]
gi|222456656|gb|ACM60918.1| ATPase AAA-2 domain protein [Caldicellulosiruptor bescii DSM 6725]
Length = 829
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 153/293 (52%), Positives = 207/293 (70%), Gaps = 11/293 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R RVG++DP RPI SF+F GPTGVGKTELA ALA FG+++AM+RIDMSEYMEK
Sbjct: 530 AIRRGRVGLKDPKRPIGSFIFLGPTGVGKTELARALAEALFGTEDAMIRIDMSEYMEKFN 589
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+E GGQLTE VR RP+SV+LFDEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 590 VSKLIGSPPGYVGYEEGGQLTEKVRRRPYSVVLFDEIEKAHPDVFNLLLQILDDGRLTDS 649
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----SDQMER-------GVAEELRRRFRPE 170
+G+TV +NT+IIMTSNIG ++I LG D+ +R V EL++ FRPE
Sbjct: 650 QGRTVSFRNTVIIMTSNIGANLITNPKKLGFSTSEDEKQRTYERIKENVMAELKKTFRPE 709
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNRIDE+IVF L++ + +IV+IMLK + ER++A T + + + ++G++P +
Sbjct: 710 FLNRIDEIIVFHPLDEEDVKKIVEIMLKNLQERIKASEYYAEFTSSLVEAIAKKGFDPVF 769
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMT 283
GARPL+RAI ++ED ++E IL G I+ GD +D G I+ + + + +
Sbjct: 770 GARPLKRAIQSMVEDKISEAILEGKIKQGDEFIVDFIDGNTEIIKKEKASTSS 822
>gi|121535702|ref|ZP_01667506.1| ATPase AAA-2 domain protein [Thermosinus carboxydivorans Nor1]
gi|121305733|gb|EAX46671.1| ATPase AAA-2 domain protein [Thermosinus carboxydivorans Nor1]
Length = 814
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 152/278 (54%), Positives = 202/278 (72%), Gaps = 10/278 (3%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SFLF GPTGVGKTELA ALA FG +EAM+R DMSEYMEKHTVS+ G+
Sbjct: 534 GLKDPKRPIGSFLFLGPTGVGKTELARALAEALFGKEEAMIRFDMSEYMEKHTVSRLIGA 593
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG+E GGQLT+AVR P+SVIL DEIEKAH DV N++LQ+L+DGR+TDG+G+TVD
Sbjct: 594 PPGYVGYEEGGQLTDAVRRHPYSVILLDEIEKAHYDVFNILLQVLEDGRLTDGQGRTVDF 653
Query: 129 KNTIIIMTSNIGDSVIARES----ILGSDQMERG------VAEELRRRFRPEFLNRIDEV 178
+NT+IIMTSN+G S + +++ L + + V EE++R FRPEF+NRIDE+
Sbjct: 654 RNTVIIMTSNVGASHLRKDTAALGFLADKEQDNAQAAKTRVMEEVKRTFRPEFINRIDEI 713
Query: 179 IVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRA 238
IVF L L +IV++ML + +RL +++L VT K +LI+EG + YGARPLRRA
Sbjct: 714 IVFNSLTDDDLKQIVELMLANVAKRLADTDLKLEVTDRAKAELIKEGRDYVYGARPLRRA 773
Query: 239 IGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYR 276
I +++ED +AE++L I GD+V +D D G + +
Sbjct: 774 IQKMVEDEIAELMLRRDITSGDTVVVDADENGKLTFTK 811
>gi|340356808|ref|ZP_08679449.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Sporosarcina
newyorkensis 2681]
gi|339620146|gb|EGQ24717.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Sporosarcina
newyorkensis 2681]
Length = 817
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 148/291 (50%), Positives = 209/291 (71%), Gaps = 9/291 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+RIDMSEYMEKH
Sbjct: 526 AIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEVMFGDEDAMIRIDMSEYMEKHA 585
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG+E GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 586 TSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDS 645
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG-------SD--QMERGVAEELRRRFRPEFL 172
KG+TVD +NT++IMTSN+G + + + +G SD M+ + EL++ FRPEFL
Sbjct: 646 KGRTVDFRNTVMIMTSNVGATELKKNRYVGFNIQDGESDYEDMKEKMLSELKKTFRPEFL 705
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NR+D++IVF L K L +IV +M +++ +RL +++EL +T + K+ +EGY+P YGA
Sbjct: 706 NRVDDMIVFHSLEKEHLRQIVSLMSEDLAKRLAEQDIELVLTEAAQDKITDEGYDPEYGA 765
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMT 283
RPLRRA+ + +ED L+E +L G + +G+ V +D + V+ + S++
Sbjct: 766 RPLRRALQKHVEDRLSEELLEGKVLMGEKVVIDVNDDKFVVRTEKQTESVS 816
>gi|222152128|ref|YP_002561288.1| stress response-related Clp ATPase ClpC [Macrococcus caseolyticus
JCSC5402]
gi|222121257|dbj|BAH18592.1| truncated stress response-related Clp ATPase ClpC [Macrococcus
caseolyticus JCSC5402]
Length = 545
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 147/273 (53%), Positives = 203/273 (74%), Gaps = 9/273 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+R+DMSE+MEKH+
Sbjct: 260 AVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAKALAEAMFGEEDAMIRVDMSEFMEKHS 319
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ GSPPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 320 VSRMVGSPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGRLTDS 379
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+TVD +NT+IIMTSN+G I +G + + + + +EL+++FRPEFL
Sbjct: 380 KGRTVDFRNTVIIMTSNVGAQEIKDNKFVGFGGQTAAQDYETIRKMMMDELKKQFRPEFL 439
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRID++IVF +L K L EIV +M++ + RL+ +++ +++T K+K+ +EGY+P YGA
Sbjct: 440 NRIDDIIVFHKLEKDHLKEIVTLMVEGLANRLKEQDIHISLTDAAKEKIADEGYDPEYGA 499
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMD 265
RPL RAI + +ED L+E +L G G +T+D
Sbjct: 500 RPLARAIQKHIEDQLSEELLKGEELTGHHITID 532
>gi|188590460|ref|YP_001919641.1| negative regulator of genetic competence ClpC/mecB [Clostridium
botulinum E3 str. Alaska E43]
gi|188500741|gb|ACD53877.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium botulinum E3 str. Alaska E43]
Length = 814
Score = 311 bits (798), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 151/282 (53%), Positives = 209/282 (74%), Gaps = 11/282 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RARVGI+DPNRPI +F+F GPTGVGKTEL+ ALA FG + +++RIDMSEYME ++VSK
Sbjct: 532 RARVGIKDPNRPIGTFIFLGPTGVGKTELSKALAEAMFGDENSIIRIDMSEYMESNSVSK 591
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPGYVG+++GGQLTEAVR +P+SV+L DEIEKAH+DV N++LQ+++DGR+TD G+
Sbjct: 592 LIGSPPGYVGYDDGGQLTEAVRRKPYSVVLLDEIEKAHQDVFNILLQIMEDGRLTDSHGK 651
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEFLNR 174
V+ KNTI+IMTSN+G I ++ +G ++M+ V EEL+R F+PEFLNR
Sbjct: 652 VVNFKNTIVIMTSNVGAHQIKKQKAIGFNTSVDENSEYEKMKDNVLEELKRSFKPEFLNR 711
Query: 175 IDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARP 234
ID+ IVF +L + L++IVD+MLK I +RLE KN+ L KK LI + + +YGARP
Sbjct: 712 IDDTIVFHKLKEEDLLDIVDLMLKSITKRLENKNIHLNFEKDSKKFLINKRVDLNYGARP 771
Query: 235 LRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYR 276
LRR I + +ED L+E IL G I++GD + ++ +S N++ +
Sbjct: 772 LRRIITKEVEDKLSEEILLGNIKIGDRIKVN-ESKDNLVFTK 812
>gi|425738218|ref|ZP_18856484.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
massiliensis S46]
gi|425480228|gb|EKU47396.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
massiliensis S46]
Length = 815
Score = 311 bits (798), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 149/272 (54%), Positives = 203/272 (74%), Gaps = 9/272 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEEDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SV+LFDEIEKAH +V N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVVLFDEIEKAHPEVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESIL---GSDQ------MERGVAEELRRRFRPEFLNRI 175
VD +NT+IIMTSN+G + + GSDQ + + + +EL+ FRPEFLNR+
Sbjct: 646 KVDFRNTVIIMTSNVGAQELQDQRFAGFGGSDQTNDYETIRKTMLKELKNAFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L K +L EIV +M+ ++ +RL+ +N+ + VT K ++ EEGY+P YGARPL
Sbjct: 706 DDIIVFHRLEKEELKEIVTMMVNKLTKRLDEQNIHIQVTDKAKDRIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RAI + +EDNL+E+IL G G +VT+D D
Sbjct: 766 IRAIQKAIEDNLSELILDGRNIEGKAVTVDYD 797
>gi|331082536|ref|ZP_08331661.1| hypothetical protein HMPREF0992_00585 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330400514|gb|EGG80144.1| hypothetical protein HMPREF0992_00585 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 809
Score = 311 bits (798), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 152/274 (55%), Positives = 200/274 (72%), Gaps = 11/274 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R RVG++DP RPI SFL GPTGVGKTEL+ ALA FGS++AM+R+DMSEYMEKH+
Sbjct: 520 AIKRGRVGLKDPKRPIGSFLLLGPTGVGKTELSKALAEAVFGSEDAMIRVDMSEYMEKHS 579
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+E GGQL+E VR P+SV+LFDEIEKAH DV N++LQ+LDDG +TD
Sbjct: 580 VSKLIGSPPGYVGYEEGGQLSEKVRRSPYSVLLFDEIEKAHPDVFNLLLQVLDDGHITDA 639
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
+G+ VD K TIIIMTSN G I LG +M+ V EE++R F+PEF
Sbjct: 640 QGRKVDFKETIIIMTSNAGAQAIVEPKKLGFGTADDAQADYKKMKDSVMEEVKRLFKPEF 699
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAK-NMELTVTHTFKKKLIEEGYNPSY 230
LNRID++IVF LNK ++ +IV I+LKE +R + + N+++ + K+ + +EG++P Y
Sbjct: 700 LNRIDDIIVFHTLNKEEIKKIVGILLKEFAKRCKTQLNIDVKIRENVKEFIGKEGFDPKY 759
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTM 264
GARPL+RAI +ED +AE IL G I+ GDSVT+
Sbjct: 760 GARPLKRAIQSKIEDAMAEEILEGRIKAGDSVTI 793
>gi|404369969|ref|ZP_10975296.1| chaperone ClpB [Clostridium sp. 7_2_43FAA]
gi|226913900|gb|EEH99101.1| chaperone ClpB [Clostridium sp. 7_2_43FAA]
Length = 864
Score = 311 bits (798), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 152/266 (57%), Positives = 198/266 (74%), Gaps = 4/266 (1%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++D N+PI SF+F GPTGVGKTELA LA F S+E ++RIDMSEYMEKH+VS+
Sbjct: 593 RARAGLKDVNKPIGSFIFLGPTGVGKTELAKTLARNLFDSEENIIRIDMSEYMEKHSVSR 652
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG++ GGQLTEAVR P+SVILFDEIEKAH DV N+ LQ+LDDGR+TD KG+
Sbjct: 653 LVGAPPGYVGYDEGGQLTEAVRRNPYSVILFDEIEKAHEDVFNIFLQILDDGRLTDNKGK 712
Query: 125 TVDLKNTIIIMTSNIGDSVI---ARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVF 181
TVD KNTIIIMTSNIG S + E ++ D + V E++ RF+PEFLNR+D++I+F
Sbjct: 713 TVDFKNTIIIMTSNIGSSYLLENKNEDVV-DDNIRAQVMNEMKLRFKPEFLNRVDDIIMF 771
Query: 182 RQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGR 241
+ L++ + +I+DI LKE+ RL+ KN+ L VT K + +EGY+P YGARPL+R I
Sbjct: 772 KPLSENGIKKIIDIFLKEVSSRLKDKNITLEVTDEAKTIMAKEGYDPVYGARPLKRYIQN 831
Query: 242 LLEDNLAEIILTGYIQVGDSVTMDCD 267
LE+NLA I+ G I G +V +D +
Sbjct: 832 SLENNLARKIIKGEIGYGSNVVVDAN 857
>gi|196233971|ref|ZP_03132808.1| ATP-dependent chaperone ClpB [Chthoniobacter flavus Ellin428]
gi|196222020|gb|EDY16553.1| ATP-dependent chaperone ClpB [Chthoniobacter flavus Ellin428]
Length = 856
Score = 311 bits (798), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 154/271 (56%), Positives = 197/271 (72%), Gaps = 8/271 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++D NRP+ SF+F GPTGVGKTELA ALA F + AMVRIDMSEYMEKH+
Sbjct: 585 AVRRARAGLQDENRPVGSFIFLGPTGVGKTELARALAEFLFDDESAMVRIDMSEYMEKHS 644
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVGFE GGQL+EAVR +P+SV+LFDEIEKAH+DV NV+LQ+LDDGR+TDG
Sbjct: 645 VARLIGAPPGYVGFEEGGQLSEAVRRKPYSVVLFDEIEKAHQDVFNVLLQVLDDGRITDG 704
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD---QMERGVAEELRRRFRPEFLNRIDEV 178
+G+TVD KN +IIMTSN+G ++IL +D Q E V + LR FRPEFLNR+DEV
Sbjct: 705 QGRTVDFKNAVIIMTSNLGS-----QAILDADNAEQREARVMDALRSHFRPEFLNRVDEV 759
Query: 179 IVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRA 238
I+F +LN L IV+I + + +RL A+ + L +T+ K L EGY+P YGARPL+RA
Sbjct: 760 IIFDRLNDEDLKRIVEIQVNRLIKRLAAQKITLKLTNEAKLHLAREGYDPVYGARPLKRA 819
Query: 239 IGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
+ R L D L+ IL G + GD +T G
Sbjct: 820 VQRSLLDPLSLEILAGKFREGDVITAHAHEG 850
>gi|167629433|ref|YP_001679932.1| clpc ATPase [Heliobacterium modesticaldum Ice1]
gi|167592173|gb|ABZ83921.1| clpc ATPase [Heliobacterium modesticaldum Ice1]
Length = 814
Score = 311 bits (798), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 152/282 (53%), Positives = 198/282 (70%), Gaps = 14/282 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AMVRIDMSEYMEKH+
Sbjct: 526 AVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEALFGQEDAMVRIDMSEYMEKHS 585
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGY+G + GGQLTEAVR RP+SVIL DEIEKA+ +V N++LQ+L+DGR+TD
Sbjct: 586 VSRLVGAPPGYIGHDEGGQLTEAVRRRPYSVILLDEIEKANPEVFNILLQVLEDGRLTDS 645
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMERG--------------VAEELRRRF 167
KG+TVD +NT+IIMTSN+G I R +++G E+G V EEL+R F
Sbjct: 646 KGRTVDFRNTVIIMTSNVGAQTIKRSAVMGFKPTEQGAKEREVQYEGMKNRVMEELKRSF 705
Query: 168 RPEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYN 227
RPEFLNRIDE+IVF L + IVD+ML E+ RL + + VT + L + GY+
Sbjct: 706 RPEFLNRIDEMIVFHTLAAEDIRRIVDLMLGEVNRRLAEAGLSMEVTDAARDHLAKVGYD 765
Query: 228 PSYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
++GARPLRRAI RL+ED ++E +L G + GD + + G
Sbjct: 766 ETFGARPLRRAILRLVEDEISEALLKGEYKAGDQIIVGMADG 807
>gi|319891481|ref|YP_004148356.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB
[Staphylococcus pseudintermedius HKU10-03]
gi|386320177|ref|YP_006016340.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
pseudintermedius ED99]
gi|317161177|gb|ADV04720.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB
[Staphylococcus pseudintermedius HKU10-03]
gi|323465348|gb|ADX77501.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
pseudintermedius ED99]
Length = 819
Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 152/280 (54%), Positives = 201/280 (71%), Gaps = 11/280 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEAMFGEEDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFLNRI 175
VD +NT+IIMTSN+G + + G + + + + +EL+ FRPEFLNR+
Sbjct: 646 RVDFRNTVIIMTSNVGAQELQDQRFAGFGGSSEGQDYETIRKTMMKELKSAFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D+ IVF +LNK +L EIV +M+ ++ RL +N+ + VT K K+ EEGY+P YGARPL
Sbjct: 706 DDTIVFHKLNKDELKEIVTMMVGKLTSRLSEQNINVRVTEAAKDKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMY 275
RAI + +EDNL+E+IL G G +VT+D D G Y
Sbjct: 766 IRAIQKTVEDNLSELILEGKELEGKNVTVDYD--GETFQY 803
>gi|300088401|ref|YP_003758923.1| ATP-dependent chaperone ClpB [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299528134|gb|ADJ26602.1| ATP-dependent chaperone ClpB [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 857
Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 148/268 (55%), Positives = 197/268 (73%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++ RAR G++DPNRP+ SF+F GPTGVGKTELA ALA F ++AMVR+DMSEYMEKHT
Sbjct: 585 SIRRARAGLQDPNRPVGSFIFLGPTGVGKTELAKALAEFMFDDEKAMVRLDMSEYMEKHT 644
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR RP+SV+L DEIEKAH DV N +LQ+LDDGR+TDG
Sbjct: 645 VSRLVGAPPGYVGYEEGGHLTEAVRRRPYSVVLLDEIEKAHPDVFNTLLQILDDGRLTDG 704
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVF 181
+G+TVD KNT+IIMTSNIG IA ++M+ V E L+ FRPEFLNR+DE+++F
Sbjct: 705 QGRTVDFKNTVIIMTSNIGSQWIAELGTGHEEEMKDKVLEALKTSFRPEFLNRVDEIVIF 764
Query: 182 RQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGR 241
QL+ + IVDI + +RL +++E+ +T ++KL E G++P+YGARPL+RAI R
Sbjct: 765 HQLSWENIKRIVDIQFTGLKKRLAGRHLEVELTDEAREKLAEIGFDPAYGARPLKRAIQR 824
Query: 242 LLEDNLAEIILTGYIQVGDSVTMDCDSG 269
+ D LA +L G + G+ + + G
Sbjct: 825 QVLDPLAVAVLEGRFKDGEVIKVTVRDG 852
>gi|260589120|ref|ZP_05855033.1| negative regulator of genetic competence ClpC/MecB [Blautia
hansenii DSM 20583]
gi|260540540|gb|EEX21109.1| negative regulator of genetic competence ClpC/MecB [Blautia
hansenii DSM 20583]
Length = 809
Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 152/274 (55%), Positives = 200/274 (72%), Gaps = 11/274 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R RVG++DP RPI SFL GPTGVGKTEL+ ALA FGS++AM+R+DMSEYMEKH+
Sbjct: 520 AIKRGRVGLKDPKRPIGSFLLLGPTGVGKTELSKALAEAVFGSEDAMIRVDMSEYMEKHS 579
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+E GGQL+E VR P+SV+LFDEIEKAH DV N++LQ+LDDG +TD
Sbjct: 580 VSKLIGSPPGYVGYEEGGQLSEKVRRSPYSVLLFDEIEKAHPDVFNLLLQVLDDGHITDA 639
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
+G+ VD K TIIIMTSN G I LG +M+ V EE++R F+PEF
Sbjct: 640 QGRKVDFKETIIIMTSNAGAQAIVEPKKLGFGTADDAQADYKKMKDSVMEEVKRLFKPEF 699
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAK-NMELTVTHTFKKKLIEEGYNPSY 230
LNRID++IVF LNK ++ +IV I+LKE +R + + N+++ + K+ + +EG++P Y
Sbjct: 700 LNRIDDIIVFHTLNKEEIKKIVGILLKEFAKRCKTQLNIDVKIRENVKEFIGKEGFDPKY 759
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTM 264
GARPL+RAI +ED +AE IL G I+ GDSVT+
Sbjct: 760 GARPLKRAIQSKIEDAMAEEILEGRIKAGDSVTI 793
>gi|295108565|emb|CBL22518.1| ATPases with chaperone activity, ATP-binding subunit [Ruminococcus
obeum A2-162]
Length = 832
Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 152/274 (55%), Positives = 200/274 (72%), Gaps = 11/274 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R RVG++DP+RPI SFLF GPTGVGKTEL+ ALA FGS++AM+R+DMSEYMEKH+
Sbjct: 531 AVKRGRVGLKDPHRPIGSFLFLGPTGVGKTELSKALAEAVFGSEQAMIRVDMSEYMEKHS 590
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG++ GGQL+E VR P+SV+LFDEIEKAH DV N++LQ+LDDG +TD
Sbjct: 591 VSKLIGSPPGYVGYDEGGQLSEKVRRNPYSVLLFDEIEKAHPDVFNILLQVLDDGHITDA 650
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
G+ VD K TIIIMTSN+G I LG ++M+ GV EE+RR F+PEF
Sbjct: 651 HGRKVDFKQTIIIMTSNVGAQAIIEPKKLGFMSEKDDRQDYERMKSGVMEEVRRLFKPEF 710
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAK-NMELTVTHTFKKKLIEEGYNPSY 230
LNRIDE++VF L K ++ +IV+I+LK + +R + + +EL ++ + K L E G++ Y
Sbjct: 711 LNRIDEIMVFHPLKKPEIKKIVNILLKNLEKRCDEQLGIELKISESVKDYLAESGFDSKY 770
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTM 264
GARPLRRAI LED +A IL G I+ GD+V +
Sbjct: 771 GARPLRRAIQNRLEDPMANKILDGGIKTGDTVKI 804
>gi|125974293|ref|YP_001038203.1| ATPase AAA-2 [Clostridium thermocellum ATCC 27405]
gi|256003489|ref|ZP_05428479.1| ATPase AAA-2 domain protein [Clostridium thermocellum DSM 2360]
gi|281418347|ref|ZP_06249367.1| ATPase AAA-2 domain protein [Clostridium thermocellum JW20]
gi|385779762|ref|YP_005688927.1| ATPase [Clostridium thermocellum DSM 1313]
gi|419722358|ref|ZP_14249502.1| ATPase AAA-2 domain protein [Clostridium thermocellum AD2]
gi|419725938|ref|ZP_14252972.1| ATPase AAA-2 domain protein [Clostridium thermocellum YS]
gi|125714518|gb|ABN53010.1| ATPase AAA-2 domain protein [Clostridium thermocellum ATCC 27405]
gi|255992513|gb|EEU02605.1| ATPase AAA-2 domain protein [Clostridium thermocellum DSM 2360]
gi|281409749|gb|EFB40007.1| ATPase AAA-2 domain protein [Clostridium thermocellum JW20]
gi|316941442|gb|ADU75476.1| ATPase AAA-2 domain protein [Clostridium thermocellum DSM 1313]
gi|380770714|gb|EIC04600.1| ATPase AAA-2 domain protein [Clostridium thermocellum YS]
gi|380781543|gb|EIC11197.1| ATPase AAA-2 domain protein [Clostridium thermocellum AD2]
Length = 818
Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 148/276 (53%), Positives = 199/276 (72%), Gaps = 11/276 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R RVG++DP RP+ SF+F GPTGVGKTEL+ ALA FG + AM+RIDMSEYMEKH+
Sbjct: 524 AIRRGRVGLKDPKRPVGSFIFLGPTGVGKTELSKALAEALFGEENAMIRIDMSEYMEKHS 583
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ GSPPGYVG+E GGQLTE VR +P+SV+LFDEIEKAH D+ N++LQ+L+DGR+TD
Sbjct: 584 VSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLFDEIEKAHPDIFNILLQILEDGRLTDS 643
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG-----------SDQMERGVAEELRRRFRPE 170
+G+ VD +NT+IIMTSNIG +I LG + M+ V EL++ FRPE
Sbjct: 644 QGRVVDFRNTVIIMTSNIGARLITEPKQLGFAPVAQDKKKSYEDMKNNVMNELKKNFRPE 703
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNRIDE+IVF L + L +IV +M+ + ERL+ ++E+ V+ K L ++G++P Y
Sbjct: 704 FLNRIDEIIVFHPLEEEHLKQIVGLMIDNLAERLKQNSIEIEVSDEAKALLAKKGFDPVY 763
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
GARPLRRA+ ++ED LAE +L G ++ GD V +D
Sbjct: 764 GARPLRRAVQSMVEDRLAEEMLEGRVKSGDKVFVDV 799
>gi|376004657|ref|ZP_09782304.1| protein disaggregation chaperone [Arthrospira sp. PCC 8005]
gi|375327005|emb|CCE18057.1| protein disaggregation chaperone [Arthrospira sp. PCC 8005]
Length = 872
Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 152/271 (56%), Positives = 199/271 (73%), Gaps = 6/271 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+++R+R G+ DPNRP++SF+F GPTGVGKTELA ALA F ++EA+VR+DMSEYMEKH+
Sbjct: 589 SIQRSRAGLSDPNRPVASFIFLGPTGVGKTELAKALASYLFDTEEAIVRVDMSEYMEKHS 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTEA+R RP++VILFDEIEKAH DV NVMLQ+LDDGRVTD
Sbjct: 649 VSRLLGAPPGYVGYDEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNVMLQILDDGRVTDA 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD----QMERGVAEELRRRFRPEFLNRIDE 177
+G+TVD KNTIIIMTSNIG I I G D +M V + +R FRPEFLNRIDE
Sbjct: 709 QGRTVDFKNTIIIMTSNIGSQYIL--DIAGDDSRYEEMRHRVMDSMRSAFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+F L QL EIV + L + +RLE M L ++ + L + G++P YGARPL+R
Sbjct: 767 IIIFHSLKPHQLREIVLLQLGNLSQRLEQHKMSLKLSESALDYLADVGFDPVYGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDS 268
AI + LE +A+ IL G G+++ +D ++
Sbjct: 827 AIQQELETQIAKGILRGEFNDGNTIYVDVEN 857
>gi|312621967|ref|YP_004023580.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202434|gb|ADQ45761.1| ATPase AAA-2 domain protein [Caldicellulosiruptor kronotskyensis
2002]
Length = 829
Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 153/293 (52%), Positives = 207/293 (70%), Gaps = 11/293 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R RVG++DP RPI SF+F GPTGVGKTELA ALA FG+++AM+RIDMSEYMEK
Sbjct: 530 AIRRGRVGLKDPKRPIGSFIFLGPTGVGKTELARALAEALFGTEDAMIRIDMSEYMEKFN 589
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+E GGQLTE VR RP+SV+LFDEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 590 VSKLIGSPPGYVGYEEGGQLTEKVRRRPYSVVLFDEIEKAHPDVFNLLLQILDDGRLTDS 649
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----SDQMER-------GVAEELRRRFRPE 170
+G+TV +NT+IIMTSNIG ++I LG D+ +R V EL++ FRPE
Sbjct: 650 QGRTVSFRNTVIIMTSNIGANLITNPKKLGFSTSEDEKQRTYERIKENVMAELKKTFRPE 709
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNRIDE+IVF L++ + +IV+IMLK + ER++A T + + + ++G++P +
Sbjct: 710 FLNRIDEIIVFHPLDEEDVKKIVEIMLKNLQERIKASEYYAEFTPSLVEAIAKKGFDPVF 769
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMT 283
GARPL+RAI ++ED ++E IL G I+ GD +D G I+ + + + +
Sbjct: 770 GARPLKRAIQSMVEDKISEAILEGKIKQGDEFIVDFVDGNTEIIKKEKASTSS 822
>gi|218297177|ref|ZP_03497839.1| ATP-dependent chaperone ClpB [Thermus aquaticus Y51MC23]
gi|218242454|gb|EED08993.1| ATP-dependent chaperone ClpB [Thermus aquaticus Y51MC23]
Length = 854
Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 152/267 (56%), Positives = 196/267 (73%), Gaps = 2/267 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DPNRPI SFLF GPTGVGKTELA LA F ++EAMVRIDM+EYMEKH
Sbjct: 573 AIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMVRIDMTEYMEKHA 632
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEAVR RP+SVILFDEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 633 VSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDS 692
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR--ESILGSDQMERGVAEELRRRFRPEFLNRIDEVI 179
G+TVD +NT+II+TSN+G +I + L +++ V L++ FRPEFLNR+DE++
Sbjct: 693 HGRTVDFRNTVIILTSNLGSPLILEGIQKGLPYERIRDEVFGVLQKHFRPEFLNRLDEIV 752
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VFR L++ Q+ +IVDI L + RL K + L ++ K L + GY+P +GARPL+R I
Sbjct: 753 VFRPLSREQIRQIVDIQLANLRARLSEKRITLELSEAAKDFLAQRGYDPVFGARPLKRVI 812
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDC 266
R LE LA+ IL G I+ GD V +D
Sbjct: 813 QRELETPLAKKILAGEIKEGDRVLVDV 839
>gi|37521111|ref|NP_924488.1| endopeptidase Clp ATP-binding chain [Gloeobacter violaceus PCC
7421]
gi|35212107|dbj|BAC89483.1| endopeptidase Clp ATP-binding chain [Gloeobacter violaceus PCC
7421]
Length = 778
Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 154/277 (55%), Positives = 202/277 (72%), Gaps = 12/277 (4%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++ P RP +SF+F GPTGVGKTELA ALA FGS++AM+R+DMSE+ME +TVSK GS
Sbjct: 484 GMKSPERPQASFIFAGPTGVGKTELAKALAATVFGSEDAMIRLDMSEFMESYTVSKLIGS 543
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG++ GGQLTEAVR RP++VIL DEIEKAH DV N++LQLLDDGR+TD KG+TV
Sbjct: 544 PPGYVGYDEGGQLTEAVRRRPYTVILLDEIEKAHPDVFNILLQLLDDGRLTDAKGRTVSF 603
Query: 129 KNTIIIMTSNIGDSVIARE------SILGSDQMERGVA------EELRRRFRPEFLNRID 176
KN +IIMTSN+G VI R + GS R VA EEL++ FRPEFLNR+D
Sbjct: 604 KNALIIMTSNLGSRVIERGGGGLGFNTTGSAGERRYVAIRDRVQEELKQVFRPEFLNRLD 663
Query: 177 EVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLR 236
EVIVF+ L++ +L ++ ++L E ER+ +EL + F K+I EGY+P++GARPLR
Sbjct: 664 EVIVFQPLDREELGQVARLLLNESLERVRELGIELEASPAFIDKVIAEGYSPAWGARPLR 723
Query: 237 RAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
RA+ RLLED++A+ +L G + G+ +D D+ G VI
Sbjct: 724 RAVQRLLEDSVADAVLLGRLVSGERYLVDVDADGKVI 760
>gi|253577148|ref|ZP_04854468.1| ATPase AAA-2 domain-containing protein [Paenibacillus sp. oral
taxon 786 str. D14]
gi|251843392|gb|EES71420.1| ATPase AAA-2 domain-containing protein [Paenibacillus sp. oral
taxon 786 str. D14]
Length = 814
Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 148/278 (53%), Positives = 205/278 (73%), Gaps = 10/278 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RP+ SF+F GPTGVGKTELA ALA FG + A++RIDMSEYMEKH+
Sbjct: 523 AIRRARAGLKDPKRPMGSFIFLGPTGVGKTELARALAEAMFGDENAVIRIDMSEYMEKHS 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
++ G+PPGYVG+E GGQLTE VR +P+SV+L DEIEKAH +V N++LQ+L+DGR+TD
Sbjct: 583 TARLVGAPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDS 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
KG+ VD +NT+II+TSN+G I R + LG + M+ V EEL++ FRPEF
Sbjct: 643 KGRVVDFRNTLIILTSNVGADAIKRNTRLGFTAVQDAGADYENMKGKVMEELKKSFRPEF 702
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNRIDE+IVF L + + +IV +M +E+ +RL +++ T+T K L + GY+P+YG
Sbjct: 703 LNRIDEIIVFHSLEEQHIGQIVTLMSEELRKRLREYDVDFTLTDRAKAFLAKVGYDPAYG 762
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
ARPLRRAI + +ED L+E +LTG ++ GDS+T+D ++G
Sbjct: 763 ARPLRRAIQKHIEDRLSEELLTGNVKKGDSLTIDEENG 800
>gi|157690869|ref|YP_001485331.1| class III stress response-related ATPase [Bacillus pumilus
SAFR-032]
gi|194017457|ref|ZP_03056068.1| negative regulator of genetic competence ClpC/mecB [Bacillus
pumilus ATCC 7061]
gi|157679627|gb|ABV60771.1| class III stress response-related ATPase [Bacillus pumilus
SAFR-032]
gi|194010729|gb|EDW20300.1| negative regulator of genetic competence ClpC/mecB [Bacillus
pumilus ATCC 7061]
Length = 811
Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 149/274 (54%), Positives = 198/274 (72%), Gaps = 9/274 (3%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTGVGKTELA ALA FG +EAM+RIDMSEYMEKH+ S+ GS
Sbjct: 531 GLKDPKRPIGSFIFLGPTGVGKTELARALAESIFGDEEAMIRIDMSEYMEKHSTSRLVGS 590
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG+E GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+L+DGR+TD KG+TVD
Sbjct: 591 PPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDF 650
Query: 129 KNTIIIMTSNIGDSVIARESILGSDQMERG---------VAEELRRRFRPEFLNRIDEVI 179
+NTI+IMTSN+G S + R +G + + G V EL+R FRPEF+NRIDE+I
Sbjct: 651 RNTILIMTSNVGASELKRNKYVGFNVQDEGQNYKDMKGKVMGELKRAFRPEFINRIDEII 710
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF L K L EIV +M ++ +RL+ +++ + +T K K+ +EG + YGARPLRRAI
Sbjct: 711 VFHSLEKKHLKEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIADEGVDLEYGARPLRRAI 770
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
+ +ED L+E +L G I+ G + +D + G V+
Sbjct: 771 QKHVEDRLSEELLKGNIEKGQQIVLDVEDGEIVV 804
>gi|251778894|ref|ZP_04821814.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|243083209|gb|EES49099.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 814
Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 150/282 (53%), Positives = 209/282 (74%), Gaps = 11/282 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RARVGI+DPNRPI +F+F GPTGVGKTEL+ ALA FG + +++RIDMSEYME ++VSK
Sbjct: 532 RARVGIKDPNRPIGTFIFLGPTGVGKTELSKALAEAMFGDENSIIRIDMSEYMESNSVSK 591
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPGY+G+++GGQLTEAVR +P+SV+L DEIEKAH+DV N++LQ+++DGR+TD G+
Sbjct: 592 LIGSPPGYIGYDDGGQLTEAVRRKPYSVVLLDEIEKAHQDVFNILLQIMEDGRLTDSHGK 651
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEFLNR 174
V+ KNTI+IMTSN+G I ++ +G ++M+ V EEL+R F+PEFLNR
Sbjct: 652 VVNFKNTIVIMTSNVGAHQIKKQKAIGFNTSVDENSEYEKMKDNVLEELKRSFKPEFLNR 711
Query: 175 IDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARP 234
ID+ IVF +L + L++IVD+MLK I +RLE KN+ L KK LI + + +YGARP
Sbjct: 712 IDDTIVFHKLKEEDLLDIVDLMLKSITKRLENKNIHLNFEKDSKKFLINKRVDLNYGARP 771
Query: 235 LRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYR 276
LRR I + +ED L+E IL G I++GD + ++ +S N++ +
Sbjct: 772 LRRIITKEVEDKLSEEILLGNIKIGDRIKVN-ESKDNLVFTK 812
>gi|75908552|ref|YP_322848.1| ATPase [Anabaena variabilis ATCC 29413]
gi|75702277|gb|ABA21953.1| ATPase [Anabaena variabilis ATCC 29413]
Length = 872
Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 155/269 (57%), Positives = 194/269 (72%), Gaps = 6/269 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRPI+SF+F GPTGVGKTELA ALA F ++EAMVRIDMSEYMEKH
Sbjct: 589 AIQRSRAGLADPNRPIASFVFLGPTGVGKTELAKALASYMFDTEEAMVRIDMSEYMEKHA 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEA+R RP++VILFDEIEKAH DV N+ LQ+LDDGRVTD
Sbjct: 649 VSRLIGAPPGYVGYEEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNIFLQILDDGRVTDA 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS----DQMERGVAEELRRRFRPEFLNRIDE 177
+G TVD KNTIIIMTSNIG I I G D+M V E +R FRPEFLNRIDE
Sbjct: 709 QGHTVDFKNTIIIMTSNIGSQYIL--DIAGDNSRYDEMRHRVMEAMRNSFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
VI+F L+K +L +IV + ++ + RL + + L ++ L E GY+P +GARPL+R
Sbjct: 767 VIIFHGLDKKELRQIVQLQVERLKARLGDRKISLRLSDAALDFLAEVGYDPVFGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
AI R LE +A+ IL G GD++ +D
Sbjct: 827 AIQRELETQIAKAILRGEFNDGDTIFVDV 855
>gi|256963095|ref|ZP_05567266.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis HIP11704]
gi|307272616|ref|ZP_07553867.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0855]
gi|256953591|gb|EEU70223.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis HIP11704]
gi|306510718|gb|EFM79737.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0855]
Length = 831
Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 146/291 (50%), Positives = 206/291 (70%), Gaps = 9/291 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FGS+EA++R+DMSE+MEK++
Sbjct: 533 AIRRARSGLKDPARPIGSFMFLGPTGVGKTELAKALAEAMFGSEEALIRVDMSEFMEKYS 592
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG+E GGQLTE +R RP+SVIL DE+EKAH DV N++LQ+LDDG +TD
Sbjct: 593 TSRLIGSPPGYVGYEEGGQLTEKIRQRPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDA 652
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+ VD +NTI+IMTSN+G + I E +G + M++ + EEL++ FRPEFL
Sbjct: 653 KGRKVDFRNTILIMTSNLGATAIREEKHVGFNVKDISKNHELMQKRIMEELKKAFRPEFL 712
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE +VF L + ++ EIV IM + + +R+ + +++ +T + + + G++P YGA
Sbjct: 713 NRIDETVVFHSLKQEEIHEIVKIMSQSVVKRMAEQEVKVKITPAAIEVIGKVGFDPEYGA 772
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMT 283
RP+RRA+ + +ED L+E +L+G IQ+GD VT+ G + R S T
Sbjct: 773 RPIRRALQKEVEDRLSEALLSGQIQLGDKVTLGASKGKITLNVRAPKASKT 823
>gi|158335282|ref|YP_001516454.1| chaperone ClpB [Acaryochloris marina MBIC11017]
gi|158305523|gb|ABW27140.1| chaperone ClpB [Acaryochloris marina MBIC11017]
Length = 875
Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 152/271 (56%), Positives = 197/271 (72%), Gaps = 6/271 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRPI+SF+F GPTGVGKTEL ALA F +++AMVRIDMSEYMEKHT
Sbjct: 589 AIQRSRAGLADPNRPIASFIFLGPTGVGKTELGKALAAYLFDTEDAMVRIDMSEYMEKHT 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG++ GGQLTEAVR RP++VILFDEIEKAH DV N+MLQ+LDDGRVTD
Sbjct: 649 VARMIGAPPGYVGYDEGGQLTEAVRRRPYAVILFDEIEKAHPDVFNIMLQILDDGRVTDS 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD----QMERGVAEELRRRFRPEFLNRIDE 177
+G+TVD KN +IIMTSNIG I + G D +M+ V + +R FRPEFLNRIDE
Sbjct: 709 QGRTVDFKNAVIIMTSNIGSQHIL--DLAGDDSRYSEMQNRVMDAMRSHFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+FR L K QL I + ++ + +RL + M L ++ + L E GY+P YGARPL+R
Sbjct: 767 LIIFRSLRKDQLRRITQLQVQRLAKRLSDRKMSLKLSESALDFLAEVGYDPVYGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDS 268
AI R LE +A+ IL G GD++ D ++
Sbjct: 827 AIQRELETQIAKAILRGDFGEGDTIFADVEN 857
>gi|162456450|ref|YP_001618817.1| ABC transporter ATPase [Sorangium cellulosum So ce56]
gi|161167032|emb|CAN98337.1| ATPase with chaperone activity, two ATP-bindingdomains [Sorangium
cellulosum So ce56]
Length = 869
Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 152/276 (55%), Positives = 202/276 (73%), Gaps = 7/276 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ D RPI SFLF GPTGVGKTELA ALA F + AMVR+DMSEY E+H
Sbjct: 585 AIRRSRAGLGDERRPIGSFLFLGPTGVGKTELARALAEILFDDERAMVRLDMSEYGERHA 644
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG+E GGQLTE VR RP+SV+LFDEIEKAH D+ N +LQ+LDDGR+TDG
Sbjct: 645 VARLIGAPPGYVGYEEGGQLTEPVRRRPYSVVLFDEIEKAHPDIWNTLLQVLDDGRLTDG 704
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA----RESILGSDQME---RGVAEELRRRFRPEFLNR 174
+G TVD KNTIII+TSN+G A R ++ ++ E R V EE+R+ FRPEFLNR
Sbjct: 705 QGHTVDFKNTIIILTSNLGTPAAAAIEERANLPADEKAELVRRAVIEEVRKHFRPEFLNR 764
Query: 175 IDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARP 234
+D++IVFR+L + Q+ +IVDI L + +RL+ + + T++ K LIE+G++P YGARP
Sbjct: 765 LDDLIVFRRLAREQMEQIVDIQLDLLRKRLDRRGLLFTISSEAKGYLIEQGWDPQYGARP 824
Query: 235 LRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGG 270
L+RAI R +ED LA+ IL G + GD+V ++ +GG
Sbjct: 825 LKRAIQRSIEDELAKRILAGEFKQGDTVRIERGAGG 860
>gi|359462099|ref|ZP_09250662.1| chaperone ClpB [Acaryochloris sp. CCMEE 5410]
Length = 874
Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 152/271 (56%), Positives = 197/271 (72%), Gaps = 6/271 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRPI+SF+F GPTGVGKTEL ALA F +++AMVRIDMSEYMEKHT
Sbjct: 589 AIQRSRAGLADPNRPIASFIFLGPTGVGKTELGKALAAYLFDTEDAMVRIDMSEYMEKHT 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG++ GGQLTEAVR RP++VILFDEIEKAH DV N+MLQ+LDDGRVTD
Sbjct: 649 VARMIGAPPGYVGYDEGGQLTEAVRRRPYAVILFDEIEKAHPDVFNIMLQILDDGRVTDS 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD----QMERGVAEELRRRFRPEFLNRIDE 177
+G+TVD KN +IIMTSNIG I + G D +M+ V + +R FRPEFLNRIDE
Sbjct: 709 QGRTVDFKNAVIIMTSNIGSQHIL--DLAGDDSRYSEMQNRVMDAMRSHFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+FR L K QL I + ++ + +RL + M L ++ + L E GY+P YGARPL+R
Sbjct: 767 LIIFRSLRKDQLRRITQLQVQRLAKRLSDRKMSLKLSESALDFLAEVGYDPVYGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDS 268
AI R LE +A+ IL G GD++ D ++
Sbjct: 827 AIQRELETQIAKAILRGDFGEGDTIFADVEN 857
>gi|152990623|ref|YP_001356345.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Nitratiruptor
sp. SB155-2]
gi|151422484|dbj|BAF69988.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Nitratiruptor
sp. SB155-2]
Length = 862
Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 144/274 (52%), Positives = 204/274 (74%), Gaps = 3/274 (1%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R + G+ D NRPI SF+F GPTGVGKTE A LA F ++++++RIDMSEYMEKH
Sbjct: 586 AIKRNKAGLSDTNRPIGSFMFLGPTGVGKTETAKTLARFLFDTEKSLIRIDMSEYMEKHA 645
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEAVR +P+SV+LFDEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 646 VSRLVGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNILLQVLDDGRLTDN 705
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVF 181
KG TVD +NTIIIMTSNI I + E+ V +EL+R F+PEFLNR+D++++F
Sbjct: 706 KGVTVDFRNTIIIMTSNIASDKIM--EFKDPEDREKAVKDELKRYFKPEFLNRLDDIVIF 763
Query: 182 RQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGR 241
L + ++++IVDIM I E+L+ +++++ +T + KK + + G++P YGARPL+RA+
Sbjct: 764 NPLGEQEIVKIVDIMFARIQEKLKERDIKIELTESAKKLVAKAGFDPVYGARPLKRALYE 823
Query: 242 LLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMY 275
++ED LAE+IL ++ GDSV D + G V++Y
Sbjct: 824 IVEDTLAELILEDKVKEGDSVKFDAE-GDQVVVY 856
>gi|242072916|ref|XP_002446394.1| hypothetical protein SORBIDRAFT_06g015220 [Sorghum bicolor]
gi|241937577|gb|EES10722.1| hypothetical protein SORBIDRAFT_06g015220 [Sorghum bicolor]
Length = 939
Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 151/287 (52%), Positives = 207/287 (72%), Gaps = 12/287 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+RVG+ DP+RPI++ LF GPTGVGKTEL ALA YFGS+ AMVR+DMSEYME+HT
Sbjct: 638 AVKRSRVGLNDPDRPIATLLFCGPTGVGKTELTKALAASYFGSEAAMVRLDMSEYMERHT 697
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGY+GF GG LTEAVR +P +V+L DEIEKAH D+ N++LQ+ +DG +TD
Sbjct: 698 VSKLIGSPPGYMGFGEGGTLTEAVRRKPFTVVLLDEIEKAHPDIFNILLQVFEDGHLTDS 757
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA--RESILGSDQ----------MERGVAEELRRRFRP 169
+G+ V KNT+I+MTSN+G + I+ R SI S Q M+ V EEL+ FRP
Sbjct: 758 QGRRVSFKNTLIVMTSNVGSTSISSGRRSIGFSTQKDTEETTYAVMKSLVMEELKAFFRP 817
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
E LNR+DEV+VFR L K Q+M I++++L+E+ RL A + L ++ + K + ++GY+ S
Sbjct: 818 ELLNRLDEVVVFRPLEKTQMMAILNLILQEVKSRLLALGIGLEISDSMKNLISQQGYDRS 877
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYR 276
YGARPLRRA+ +L+ED ++E IL G + GD++ MD D+ G + R
Sbjct: 878 YGARPLRRAVTQLVEDVISEAILFGQFKPGDTILMDTDATGKPCLSR 924
>gi|381190965|ref|ZP_09898477.1| endopeptidase Clp ATP-binding chain B, clpB [Thermus sp. RL]
gi|380451054|gb|EIA38666.1| endopeptidase Clp ATP-binding chain B, clpB [Thermus sp. RL]
Length = 854
Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 153/280 (54%), Positives = 196/280 (70%), Gaps = 16/280 (5%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DPNRPI SFLF GPTGVGKTELA LA F ++EAM+RIDM+EYMEKH
Sbjct: 573 AIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHA 632
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEAVR RP+SVILFDEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 633 VSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDS 692
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEE---------LRRRFRPEFL 172
G+TVD +NT+II+TSN+G +I D +++G E ++ FRPEFL
Sbjct: 693 HGRTVDFRNTVIILTSNLGSPLIL-------DGIQKGWPYEXIRDEVLXVXQQHFRPEFL 745
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NR+DE++VFR L K Q+ +IV+I L + RL K + L +T K L E GY+P +GA
Sbjct: 746 NRLDEIVVFRPLTKEQIRQIVEIQLSYLRARLAEKRISLELTEAAKDFLAERGYDPVFGA 805
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
RPL+R I R LE LA+ IL G ++ GD + +D G V
Sbjct: 806 RPLKRVIQRELETPLAQKILAGEVKEGDRLQVDVGPAGLV 845
>gi|257868131|ref|ZP_05647784.1| ATP-dependent Clp protease [Enterococcus casseliflavus EC30]
gi|257874594|ref|ZP_05654247.1| ATP-dependent Clp protease [Enterococcus casseliflavus EC10]
gi|257877740|ref|ZP_05657393.1| ATP-dependent Clp protease [Enterococcus casseliflavus EC20]
gi|257802245|gb|EEV31117.1| ATP-dependent Clp protease [Enterococcus casseliflavus EC30]
gi|257808758|gb|EEV37580.1| ATP-dependent Clp protease [Enterococcus casseliflavus EC10]
gi|257811906|gb|EEV40726.1| ATP-dependent Clp protease [Enterococcus casseliflavus EC20]
Length = 829
Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 145/277 (52%), Positives = 203/277 (73%), Gaps = 9/277 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++ RAR G++DPNRPI SF+F GPTGVGKTELA ALA FGS++A+VR+DMSE+MEK++
Sbjct: 536 SIRRARSGLKDPNRPIGSFMFLGPTGVGKTELAKALAEAMFGSEDALVRVDMSEFMEKYS 595
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG++ GGQLTE +R +P+SVIL DE+EKAH DV N++LQ+LDDG +TD
Sbjct: 596 TSRLIGSPPGYVGYDEGGQLTEKIRSKPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDA 655
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+ VD +NTI+IMTSNIG I E +G M++ + EEL++ FRPEFL
Sbjct: 656 KGRKVDFRNTILIMTSNIGAQQIREEKSVGFNVTDLTKDHQAMQKRILEELKKAFRPEFL 715
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NR+DE +VF+ L + ++ EIV IM K I +RL ++++L +T + + + G++P YGA
Sbjct: 716 NRVDETVVFQSLGEGEIHEIVKIMSKAIIKRLSNQDIQLKITPSAIDVIGKAGFDPEYGA 775
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
RP+RRA+ + +ED L+E +L+G I +GD VT+ G
Sbjct: 776 RPIRRALQKEVEDRLSEALLSGQIHLGDKVTIGASKG 812
>gi|225574400|ref|ZP_03783010.1| hypothetical protein RUMHYD_02469 [Blautia hydrogenotrophica DSM
10507]
gi|225038402|gb|EEG48648.1| ATPase family associated with various cellular activities (AAA)
[Blautia hydrogenotrophica DSM 10507]
Length = 827
Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 153/272 (56%), Positives = 197/272 (72%), Gaps = 11/272 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R RVG++DP RPI SFLF GPTGVGKTEL+ ALA FG+++AM+R+DMSEYMEKH+
Sbjct: 536 AVKRGRVGLKDPARPIGSFLFLGPTGVGKTELSKALAEAVFGTEQAMIRVDMSEYMEKHS 595
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG++ GGQL+E VR P+SVILFDEIEKAH DV N++LQ+LDDG +TD
Sbjct: 596 VSKLIGSPPGYVGYDEGGQLSEKVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDA 655
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
+G+ +D K TIIIMTSN G VI LG ++M+ V +E+RR F+PEF
Sbjct: 656 QGRKIDFKQTIIIMTSNAGAQVIVEPKKLGFGAQEDEKQDYERMKSSVMDEVRRMFKPEF 715
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERL-EAKNMELTVTHTFKKKLIEEGYNPSY 230
LNRIDE+IVF LNK + +IV I+LK + +R + + L V++T K+ L E G++ Y
Sbjct: 716 LNRIDEIIVFHSLNKEHIKKIVSILLKNLEKRCKDTMGITLKVSNTVKEHLAEAGFDSKY 775
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSV 262
GARPLRRAI +ED +A IL G IQ GD+V
Sbjct: 776 GARPLRRAIQTKIEDAMANEILEGRIQQGDTV 807
>gi|153813279|ref|ZP_01965947.1| hypothetical protein RUMOBE_03696 [Ruminococcus obeum ATCC 29174]
gi|149830692|gb|EDM85783.1| ATPase family associated with various cellular activities (AAA)
[Ruminococcus obeum ATCC 29174]
Length = 708
Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 153/274 (55%), Positives = 199/274 (72%), Gaps = 11/274 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R RVG++DPNRPI SFLF GPTGVGKTEL+ ALA FGS++AM+R+DMSEYMEKH+
Sbjct: 419 AVKRGRVGLKDPNRPIGSFLFLGPTGVGKTELSKALAEAVFGSEQAMIRVDMSEYMEKHS 478
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG++ GGQL+E VR P+SV+LFDEIEKAH DV N++LQ+LDDG +TD
Sbjct: 479 VSKMIGSPPGYVGYDEGGQLSEKVRRNPYSVLLFDEIEKAHPDVFNILLQVLDDGHITDA 538
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
G+ VD K TIIIMTSN+G I LG ++M+ GV EE+RR F+PEF
Sbjct: 539 HGRKVDFKQTIIIMTSNVGAQAIIEPKKLGFMSQDNEKQDYERMKSGVMEEVRRLFKPEF 598
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERL-EAKNMELTVTHTFKKKLIEEGYNPSY 230
LNRIDE++VF L K ++ +IV+I+LK + +R E ++L +T + + L E G++ Y
Sbjct: 599 LNRIDEIMVFHPLKKPEIRKIVNILLKNLEKRCAEQMGIQLKITDSVRDYLAESGFDSKY 658
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTM 264
GARPLRRAI LED +A IL G I+ GD+V +
Sbjct: 659 GARPLRRAIQNKLEDPMANEILEGRIRTGDTVKV 692
>gi|298246165|ref|ZP_06969971.1| ATP-dependent chaperone ClpB [Ktedonobacter racemifer DSM 44963]
gi|297553646|gb|EFH87511.1| ATP-dependent chaperone ClpB [Ktedonobacter racemifer DSM 44963]
Length = 864
Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 148/269 (55%), Positives = 200/269 (74%), Gaps = 1/269 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G++DPNRP++SFLF GPTGVGKTELA ALA F ++AMVRIDMSEYMEKH+
Sbjct: 584 AIRRSRAGLQDPNRPLASFLFLGPTGVGKTELARALAEFLFDDEQAMVRIDMSEYMEKHS 643
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEAVR P+SVIL DEIEKA +V NV+LQLLDDGR+TDG
Sbjct: 644 VSRLIGAPPGYVGYEEGGQLTEAVRRHPYSVILLDEIEKAAPEVFNVLLQLLDDGRLTDG 703
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEELRRR-FRPEFLNRIDEVIV 180
+G+TVD +NT++IMTSN+G + + + + ++R V + LR FRPEF+NRIDEVI+
Sbjct: 704 QGRTVDFRNTVVIMTSNVGTTWLHEYDGMDEEDVQRTVRQRLREEGFRPEFINRIDEVII 763
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F ++K Q+ IVDI + + RL +++ L +T K L EEGY+P +GARPL+R I
Sbjct: 764 FHPISKEQVRNIVDIQINRLRPRLAERHITLQLTDAAKDYLAEEGYDPQFGARPLKRTIQ 823
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
+ +E+ +A IL G ++ GD+V +D +G
Sbjct: 824 KEVENRIARAILDGSVRDGDTVQIDVQNG 852
>gi|407978585|ref|ZP_11159414.1| class III stress response-related ATPase [Bacillus sp. HYC-10]
gi|407414781|gb|EKF36407.1| class III stress response-related ATPase [Bacillus sp. HYC-10]
Length = 811
Score = 311 bits (796), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 149/274 (54%), Positives = 198/274 (72%), Gaps = 9/274 (3%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTGVGKTELA ALA FG +EAM+RIDMSEYMEKH+ S+ GS
Sbjct: 531 GLKDPKRPIGSFIFLGPTGVGKTELARALAESIFGDEEAMIRIDMSEYMEKHSTSRLVGS 590
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG++ GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+L+DGR+TD KG+TVD
Sbjct: 591 PPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDF 650
Query: 129 KNTIIIMTSNIGDSVIARESILGSDQMERG---------VAEELRRRFRPEFLNRIDEVI 179
+NTI+IMTSN+G S + R +G + + G V EL+R FRPEF+NRIDE+I
Sbjct: 651 RNTILIMTSNVGASELKRNKYVGFNVQDEGQNYKDMKGKVMGELKRAFRPEFINRIDEII 710
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF L K L EIV +M ++ +RL+ +++ + +T K K+ EEG + YGARPLRRAI
Sbjct: 711 VFHSLEKKHLKEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIAEEGVDLEYGARPLRRAI 770
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
+ +ED L+E +L G I+ G + +D + G V+
Sbjct: 771 QKHVEDRLSEELLKGNIEKGQHIVLDVEDGEIVV 804
>gi|395759442|pdb|4FCT|A Chain A, Crystal Structure Of The C-Terminal Domain Of Clpb
gi|395759449|pdb|4FD2|A Chain A, Crystal Structure Of The C-Terminal Domain Of Clpb
gi|395759450|pdb|4FD2|B Chain B, Crystal Structure Of The C-Terminal Domain Of Clpb
gi|395759451|pdb|4FD2|D Chain D, Crystal Structure Of The C-Terminal Domain Of Clpb
Length = 308
Score = 311 bits (796), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 157/280 (56%), Positives = 197/280 (70%), Gaps = 4/280 (1%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DPNRPI SFLF GPTGVGKTELA LA F ++EAM+RIDM+EYMEKH
Sbjct: 29 AIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHA 88
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEAVR RP+SVILFD IEKAH DV N++LQ+LDDGR+TD
Sbjct: 89 VSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDAIEKAHPDVFNILLQILDDGRLTDS 148
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMER---GVAEELRRRFRPEFLNRIDEV 178
G+TVD +NT+II+TSN+G +I E + ER V + L++ FRPEFLNR+DE+
Sbjct: 149 HGRTVDFRNTVIILTSNLGSPLIL-EGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEI 207
Query: 179 IVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRA 238
+VFR L K Q+ +IV+I L + RL K + L +T K L E GY+P +GARPLRR
Sbjct: 208 VVFRPLTKEQIRQIVEIQLSYLRARLAEKRISLELTEAAKDFLAERGYDPVFGARPLRRV 267
Query: 239 IGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHR 278
I R LE LA+ IL G ++ GD V +D G V R
Sbjct: 268 IQRELETPLAQKILAGEVKEGDRVQVDVGPAGLVFAVPAR 307
>gi|392411290|ref|YP_006447897.1| ATP-dependent chaperone ClpB [Desulfomonile tiedjei DSM 6799]
gi|390624426|gb|AFM25633.1| ATP-dependent chaperone ClpB [Desulfomonile tiedjei DSM 6799]
Length = 863
Score = 311 bits (796), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 149/271 (54%), Positives = 200/271 (73%), Gaps = 2/271 (0%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G+ DPNRPI SF+F GPTGVGKTELA ALA F ++A+VR+DMSEYME+H+V++
Sbjct: 591 RARSGLHDPNRPIGSFIFLGPTGVGKTELARALAEFLFDDEQAIVRVDMSEYMERHSVAR 650
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E GG LTEAVR RP+SV+LFDEIEKAH +V N +LQ+LDDGR+TDGKG+
Sbjct: 651 LIGAPPGYVGYEEGGYLTEAVRRRPYSVVLFDEIEKAHPEVFNALLQILDDGRLTDGKGR 710
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVFRQL 184
TVD KNTIIIMTSNIG S I + + ++M + V + LR F+PEFLNR+D++I+F L
Sbjct: 711 TVDFKNTIIIMTSNIGSSEIRELAGVSEERMRQRVMDALRAHFKPEFLNRLDDIIIFHAL 770
Query: 185 NKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGRLLE 244
K Q+ +IVDI + + +RL + L + ++ L EG++P+YGARPL+RAI RL+E
Sbjct: 771 TKDQIKKIVDIQMNRLNKRLAESKLHLVLDDGARELLSSEGFDPAYGARPLKRAIQRLIE 830
Query: 245 DNLAEIILTGYIQVGDSVTMDCDSGGNVIMY 275
+ L+ +L G Q GD++ D GN + +
Sbjct: 831 NRLSLDLLKGRFQPGDTIVAKVD--GNQLAF 859
>gi|217076807|ref|YP_002334523.1| chaperone ClpB [Thermosipho africanus TCF52B]
gi|217036660|gb|ACJ75182.1| chaperone ClpB [Thermosipho africanus TCF52B]
Length = 788
Score = 311 bits (796), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 147/274 (53%), Positives = 203/274 (74%), Gaps = 2/274 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ +AR GI+DPNRPI +FLF GP+GVGKTELA +A FGS+ A++RIDMSEYMEKH+
Sbjct: 507 AIRKARAGIKDPNRPIGTFLFLGPSGVGKTELAKTIAELLFGSENALIRIDMSEYMEKHS 566
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG++ GGQLTEAVR +P+SVIL DE+EKAH +V NV+LQ+ DDGR+TDG
Sbjct: 567 VARLIGAPPGYVGYDQGGQLTEAVRRKPYSVILLDEVEKAHPEVFNVLLQVFDDGRLTDG 626
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD--QMERGVAEELRRRFRPEFLNRIDEVI 179
KG TVD +NTIIIMTSN+ I R+ G D ++E V E+L+ FRPEF+NRID V+
Sbjct: 627 KGNTVDFRNTIIIMTSNLASDKILRKVEAGVDFEKIEESVREDLKHYFRPEFINRIDHVV 686
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
+F+ L K + EIV+ ++ + RL+ KN+++ +T K+ L E+GY+P++GARPLRR I
Sbjct: 687 IFKPLTKEHMKEIVEKLVARLENRLKEKNLKIKLTEKAKEYLAEKGYDPAFGARPLRRLI 746
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
R +E L+ I+ G I GD V +D ++G ++
Sbjct: 747 EREIETPLSVKIIAGEIAEGDIVLVDEENGKLIV 780
>gi|332707255|ref|ZP_08427308.1| ATP-dependent chaperone ClpB [Moorea producens 3L]
gi|332353989|gb|EGJ33476.1| ATP-dependent chaperone ClpB [Moorea producens 3L]
Length = 875
Score = 311 bits (796), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 155/271 (57%), Positives = 193/271 (71%), Gaps = 6/271 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRP +SF+F GPTGVGKTELA ALA F ++EAMVRIDMSEYMEKHT
Sbjct: 589 AIQRSRAGLADPNRPTASFIFLGPTGVGKTELAKALAAYLFDTEEAMVRIDMSEYMEKHT 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEA+R RP++VILFDEIEKAH DV NVMLQ+LDDGRVTD
Sbjct: 649 VSRLIGAPPGYVGYEEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNVMLQILDDGRVTDA 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD----QMERGVAEELRRRFRPEFLNRIDE 177
+G TVD KN++IIMTSNIG I + G D +M V E +R FRPEFLNRIDE
Sbjct: 709 QGHTVDFKNSVIIMTSNIGSQYIL--DVAGDDSKYEEMRSRVMEAMRSSFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
VI+F L K QL IV + + +RL + M L ++ L + GY+P +GARPL+R
Sbjct: 767 VIIFHTLQKHQLRNIVQLQTLRLEQRLAERKMSLKLSDAALDFLADLGYDPVFGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDS 268
AI R LE LA+ IL GD++ +D ++
Sbjct: 827 AIQRELETPLAKGILRSEFNDGDTIFVDVNN 857
>gi|222100676|ref|YP_002535244.1| ATPase AAA-2 domain protein [Thermotoga neapolitana DSM 4359]
gi|221573066|gb|ACM23878.1| ATPase AAA-2 domain protein [Thermotoga neapolitana DSM 4359]
Length = 795
Score = 311 bits (796), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 156/268 (58%), Positives = 199/268 (74%), Gaps = 2/268 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ +AR GI+DPNRP+ +FLF GPTGVGKTELA LA FGS+ A++RIDMSEYMEKH
Sbjct: 512 AIRKARAGIKDPNRPVGTFLFLGPTGVGKTELAKTLAEVLFGSENALIRIDMSEYMEKHA 571
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK G+PPGYVG+E GGQLTEAVR RP+SVIL DEIEKAH DV N++LQ++DDGR+TD
Sbjct: 572 VSKLIGAPPGYVGYEEGGQLTEAVRRRPYSVILLDEIEKAHPDVFNILLQIMDDGRLTDA 631
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD--QMERGVAEELRRRFRPEFLNRIDEVI 179
KG VD KNTIIIMTSNI +I G ++E V EEL+ FRPEF+NRID V+
Sbjct: 632 KGNVVDFKNTIIIMTSNIASDLILNFVREGKSFEEIEEKVREELKHYFRPEFINRIDHVV 691
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF+ L K + +IV+IMLK + RL+ +N+ LT+T K+ L E+GY+P++GARPLRR I
Sbjct: 692 VFKPLTKEHMKQIVEIMLKRLEGRLKDRNIRLTITDAAKEYLAEKGYDPTFGARPLRRLI 751
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCD 267
R +E LA +I+ G ++ G +V +D D
Sbjct: 752 EREIETPLARMIIAGEVKEGQTVRVDFD 779
>gi|52078581|ref|YP_077372.1| class III stress response-related ATPase [Bacillus licheniformis
DSM 13 = ATCC 14580]
gi|319649145|ref|ZP_08003353.1| genetic competence ClpC/mecB negative regulatory protein [Bacillus
sp. BT1B_CT2]
gi|404487450|ref|YP_006711556.1| ATP-dependent Clp protease ClpC [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|423680479|ref|ZP_17655318.1| class III stress response-related ATPase [Bacillus licheniformis
WX-02]
gi|52001792|gb|AAU21734.1| class III stress response-related ATPase [Bacillus licheniformis
DSM 13 = ATCC 14580]
gi|52346444|gb|AAU39078.1| ATP-dependent Clp protease ClpC [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|317388845|gb|EFV69664.1| genetic competence ClpC/mecB negative regulatory protein [Bacillus
sp. BT1B_CT2]
gi|383441585|gb|EID49294.1| class III stress response-related ATPase [Bacillus licheniformis
WX-02]
Length = 810
Score = 311 bits (796), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 148/274 (54%), Positives = 200/274 (72%), Gaps = 9/274 (3%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTGVGKTELA ALA FG +EAM+RIDMSEYMEKH+ S+ GS
Sbjct: 530 GLKDPKRPIGSFIFLGPTGVGKTELARALAESIFGDEEAMIRIDMSEYMEKHSTSRLVGS 589
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG++ GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+L+DGR+TD KG+TVD
Sbjct: 590 PPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDF 649
Query: 129 KNTIIIMTSNIGDSVIARESILGSD---------QMERGVAEELRRRFRPEFLNRIDEVI 179
+NTI+IMTSN+G S + R +G + M+ V EL+R FRPEF+NRIDE+I
Sbjct: 650 RNTILIMTSNVGASELRRNKYVGFNVQDETQNYKDMKDKVMGELKRAFRPEFINRIDEII 709
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF L K L +IV +M ++ +RL+ +++ + +T K+K+ +EG + YGARPLRRAI
Sbjct: 710 VFHSLEKKHLKDIVSLMSDQLTKRLKEQDLSIELTEAAKEKIADEGVDLEYGARPLRRAI 769
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
+ +ED L+E +L G+IQ G + +D + G V+
Sbjct: 770 QKHVEDRLSEELLKGHIQKGQHIVLDVEDGEFVV 803
>gi|229917386|ref|YP_002886032.1| ATPase AAA [Exiguobacterium sp. AT1b]
gi|229468815|gb|ACQ70587.1| ATPase AAA-2 domain protein [Exiguobacterium sp. AT1b]
Length = 811
Score = 311 bits (796), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 148/282 (52%), Positives = 198/282 (70%), Gaps = 10/282 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA A+A FG ++A++RIDMSEYMEKH
Sbjct: 523 AIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARAVAEAMFGDEDAIIRIDMSEYMEKHA 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG+E GGQLTE VR +P+SVIL DEIEKAH +V N++LQ+LDDGR+TD
Sbjct: 583 TSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVILLDEIEKAHPEVFNILLQVLDDGRLTDS 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
KG+TVD +NT+IIMTSN+G + + R +G +M+ V EEL++ FRPEF
Sbjct: 643 KGRTVDFRNTVIIMTSNVGAAALQRNKYVGFTVEDDVKREYTEMKDKVLEELKKAFRPEF 702
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNRIDE+ VF L K + EI+ +M + + +RL + ++ ++T K+ + GY+P YG
Sbjct: 703 LNRIDEITVFHSLQKEHIQEIIKLMAETLKKRLAEQGVDFSLTDAALDKIADVGYDPEYG 762
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
ARPLRRA+ R +ED L+E +L G I G V +D G V+
Sbjct: 763 ARPLRRALQREVEDRLSEAMLGGTIARGSKVALDVQDGEFVV 804
>gi|288574596|ref|ZP_06392953.1| ATPase AAA-2 domain protein [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288570337|gb|EFC91894.1| ATPase AAA-2 domain protein [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 824
Score = 311 bits (796), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 152/266 (57%), Positives = 200/266 (75%), Gaps = 11/266 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SFLF GPTGVGKTE+A +LA FGS++A+V +DMSE+ME+H
Sbjct: 527 AIRRARSGLKDPKRPIGSFLFLGPTGVGKTEMARSLADFLFGSEDALVTLDMSEFMERHE 586
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK G+PPGYVG E+GG+LTE +R RP+SVILFDEIEKA+ DV NV+LQ+L++GR+TDG
Sbjct: 587 VSKLIGAPPGYVGHESGGKLTETIRRRPYSVILFDEIEKANPDVFNVLLQILEEGRLTDG 646
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SD--QMERGVAEELRRRFRPE 170
+G+ VD +NT++IMTSNIG I + G SD + + + EE+RR FRPE
Sbjct: 647 QGRKVDFRNTVVIMTSNIGARNIVKRQGFGFATDNHEGFSDWSSVSKNIDEEVRRAFRPE 706
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNRIDE +VF L+K Q++ I+D+MLKE+ ERL K + LTV+ K+ ++E+GY P Y
Sbjct: 707 FLNRIDEQVVFSPLSKEQMLGILDVMLKEVRERLSEKGIRLTVSTKAKELILEKGYQPQY 766
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYI 256
GARPLRR I RLLED LA++IL G +
Sbjct: 767 GARPLRRTIQRLLEDPLADMILDGSL 792
>gi|427736204|ref|YP_007055748.1| ATP-dependent chaperone ClpB [Rivularia sp. PCC 7116]
gi|427371245|gb|AFY55201.1| ATP-dependent chaperone ClpB [Rivularia sp. PCC 7116]
Length = 872
Score = 311 bits (796), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 154/271 (56%), Positives = 194/271 (71%), Gaps = 6/271 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRPI+SF+F GPTGVGKTEL ALA F ++EAMVRIDMSEYMEKH
Sbjct: 589 AIQRSRAGLADPNRPIASFIFLGPTGVGKTELGKALASYMFDTEEAMVRIDMSEYMEKHA 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEA+R RP++VILFDEIEKAH DV N+MLQ+LDDGRVTD
Sbjct: 649 VSRLVGAPPGYVGYEEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNIMLQILDDGRVTDS 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD----QMERGVAEELRRRFRPEFLNRIDE 177
+G+TVD KNTIIIMTSNIG I + G D +M V E +R FRPEFLNRIDE
Sbjct: 709 QGRTVDFKNTIIIMTSNIGSQFIL--DVAGDDSGYEEMRTRVMEAMRSSFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I F L K +L +IV + ++ + RL + M L + L E GY+P +GARPL+R
Sbjct: 767 IIFFHALQKSELRKIVQLQVERLRHRLADRKMSLKLADAALDFLAEVGYDPVFGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDS 268
AI R LE +A+ IL G GD++ +D ++
Sbjct: 827 AIQRELETQIAKSILRGEFNDGDTIFVDVEN 857
>gi|239636922|ref|ZP_04677920.1| negative regulator of genetic competence ClpC/mecB [Staphylococcus
warneri L37603]
gi|239597470|gb|EEQ79969.1| negative regulator of genetic competence ClpC/mecB [Staphylococcus
warneri L37603]
Length = 817
Score = 311 bits (796), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 148/272 (54%), Positives = 199/272 (73%), Gaps = 9/272 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGY+G ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYIGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFLNRI 175
VD +NT+IIMTSN+G + + G + + + + +EL+ FRPEFLNR+
Sbjct: 646 QVDFRNTVIIMTSNVGAQELQDQRFAGFGGADDGQDYESIRKTMMKELKNAFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L+K +L EIV +M+ ++ RL +N+ + VT K+K+ EEGY+P YGARPL
Sbjct: 706 DDIIVFHKLSKDELKEIVTMMVNKLTLRLSEQNINIKVTEKAKEKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RAI + +EDNL+E+IL G G VT+D D
Sbjct: 766 IRAIQKTVEDNLSELILDGNQLEGKEVTVDHD 797
>gi|354564799|ref|ZP_08983975.1| ATP-dependent chaperone ClpB [Fischerella sp. JSC-11]
gi|353549925|gb|EHC19364.1| ATP-dependent chaperone ClpB [Fischerella sp. JSC-11]
Length = 872
Score = 310 bits (795), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 152/271 (56%), Positives = 197/271 (72%), Gaps = 6/271 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRPI+SF+F GPTGVGKTELA ALA F ++EA+VRIDMSEYMEKH
Sbjct: 589 AIQRSRAGLADPNRPIASFIFLGPTGVGKTELAKALAAYLFDTEEALVRIDMSEYMEKHA 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTE++R RP++VILFDEIEKAH DV N++LQ+LDDGRVTD
Sbjct: 649 VSRLIGAPPGYVGYEEGGQLTESIRRRPYAVILFDEIEKAHPDVFNILLQILDDGRVTDA 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS----DQMERGVAEELRRRFRPEFLNRIDE 177
+G TVD KNTIIIMTSNIG I + G D+M V E +R FRPEFLNRIDE
Sbjct: 709 QGHTVDFKNTIIIMTSNIGSQFIL--DVAGDESRYDEMRHRVMEAMRNSFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+F L K +L EIV + ++ + +RL + + L ++ L E GY+P +GARPL+R
Sbjct: 767 IIIFHGLQKEELREIVQLQIERLRQRLGDRKISLKLSDAALDFLAEVGYDPVFGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDS 268
AI R LE +A+ IL G GD++ +D ++
Sbjct: 827 AIQRELETPIAKAILRGEFNDGDTIFVDIEN 857
>gi|297618415|ref|YP_003703574.1| ATPase AAA [Syntrophothermus lipocalidus DSM 12680]
gi|297146252|gb|ADI03009.1| ATPase AAA-2 domain protein [Syntrophothermus lipocalidus DSM
12680]
Length = 830
Score = 310 bits (795), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 147/277 (53%), Positives = 207/277 (74%), Gaps = 10/277 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FGS+EA++R+DMSEYMEKH
Sbjct: 546 AVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEALFGSEEALIRLDMSEYMEKHA 605
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ GSPPGYVG++ GGQLTE VR +P+SVIL DEIEKAH DV N++LQ+L+DGR+TDG
Sbjct: 606 VARMIGSPPGYVGYDEGGQLTEKVRRKPYSVILLDEIEKAHPDVYNILLQVLEDGRLTDG 665
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
KG+TVD +NT++IMTSN+G I + LG ++M+ + E+L+ FRPEF
Sbjct: 666 KGRTVDFRNTVVIMTSNVGADTIRKARNLGFGRQDADEQDHEKMKEKIMEKLKATFRPEF 725
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNRIDEVIVF LN +L +I +++++++ +RLE + L VT KK +I++G++P +G
Sbjct: 726 LNRIDEVIVFHSLNDTELGQIFELLIRDLRKRLEDQGFRLQVTDDAKKFIIKQGHDPVFG 785
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDS 268
ARPL+RAI + +E+ L+E IL ++ GD++ +D ++
Sbjct: 786 ARPLKRAIQKNVENLLSEEILKRTVEPGDTILIDVEN 822
>gi|239623567|ref|ZP_04666598.1| ATPase AAA-2 domain-containing protein [Clostridiales bacterium
1_7_47_FAA]
gi|239521598|gb|EEQ61464.1| ATPase AAA-2 domain-containing protein [Clostridiales bacterium
1_7_47FAA]
Length = 876
Score = 310 bits (795), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 158/289 (54%), Positives = 206/289 (71%), Gaps = 13/289 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R RVG++DP RPI SFLF GPTGVGKTEL+ AL+ FG++ A++R+DMSEYMEKH+
Sbjct: 527 AIRRGRVGLKDPGRPIGSFLFLGPTGVGKTELSKALSEAMFGTENALIRVDMSEYMEKHS 586
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG++ GGQL+E VR P+SVILFDEIEKAH DV N++LQ+LDDG +TD
Sbjct: 587 VSKMIGSPPGYVGYDEGGQLSEKVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDA 646
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----SDQ------MERGVAEELRRRFRPEF 171
+G+ +D KNTIIIMTSN G I LG SD M+ V +E++R F+PEF
Sbjct: 647 QGRKIDFKNTIIIMTSNAGAENIISPKRLGFGMTSDAKADYNFMKDRVMDEVKRLFKPEF 706
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYER-LEAKNMELTVTHTFKKKLIEEGYNPSY 230
LNRIDE+IVF QL K + I DIML+ I +R E ++L VT ++ LI++GY+ Y
Sbjct: 707 LNRIDEIIVFHQLTKEHIRGIADIMLRTIGKRSKEQLGIQLAVTDGAREYLIDKGYDDKY 766
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRN 279
GARPLRR I L+ED +AE +L G I+ GD+VT+D D G + ++ R+
Sbjct: 767 GARPLRRTIQNLVEDKMAEEMLDGSIKAGDTVTVDFD--GEKLTFKARS 813
>gi|328956590|ref|YP_004373976.1| class III stress response-like ATPase, AAA+ superfamily
[Carnobacterium sp. 17-4]
gi|328672914|gb|AEB28960.1| class III stress response-like ATPase, AAA+ superfamily
[Carnobacterium sp. 17-4]
Length = 830
Score = 310 bits (795), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 141/277 (50%), Positives = 202/277 (72%), Gaps = 9/277 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G++DPNRPI SF+F GPTGVGKTELA ALA FG++EA+VR+DMSE+MEK++
Sbjct: 531 AIRRSRSGLKDPNRPIGSFMFLGPTGVGKTELAKALAEAMFGNEEALVRVDMSEFMEKYS 590
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG++ GGQLTE +R +P+SVILFDE+EKAH DV N++LQ+LDDG +TD
Sbjct: 591 TSRLIGSPPGYVGYDEGGQLTEKIRQKPYSVILFDEVEKAHPDVFNILLQVLDDGHLTDA 650
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+ VD KNT++IMTSN+G + + E +G ME+ + EEL++ F+PEF+
Sbjct: 651 KGRKVDFKNTVMIMTSNLGATALRDEKAVGFGTANNKKDHSAMEKRIMEELKKTFKPEFI 710
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRID+ IVF L K +L +IV +M I +RL+ ++E+ +T + + GY+P YGA
Sbjct: 711 NRIDDSIVFHSLEKEELTQIVKLMAHTIIKRLKDMDIEVKITQAAIDVIAKAGYDPEYGA 770
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
RP+RRA+ + +ED L+E +L+G +++GD +T+ G
Sbjct: 771 RPIRRALQKEVEDRLSEELLSGRVKIGDQITIGASKG 807
>gi|260434470|ref|ZP_05788440.1| ATP-dependent chaperone ClpB [Synechococcus sp. WH 8109]
gi|260412344|gb|EEX05640.1| ATP-dependent chaperone ClpB [Synechococcus sp. WH 8109]
Length = 862
Score = 310 bits (795), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 150/272 (55%), Positives = 197/272 (72%), Gaps = 8/272 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRPI+SFLF GPTGVGKTEL+ ALA F S +AMVRIDMSEYMEKHT
Sbjct: 588 AIQRSRAGLSDPNRPIASFLFLGPTGVGKTELSKALANRLFDSDDAMVRIDMSEYMEKHT 647
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEAVR RP++VILFDE+EKAH DV NVMLQ+LDDGRVTDG
Sbjct: 648 VSRLIGAPPGYVGYEAGGQLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDG 707
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD-----QMERGVAEELRRRFRPEFLNRID 176
+G TVD NT++I+TSNIG I L SD ME V + LR FRPEFLNR+D
Sbjct: 708 QGHTVDFTNTVLILTSNIGSQSILE---LASDPEQHGAMESRVNDALRAHFRPEFLNRLD 764
Query: 177 EVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLR 236
+ I+F L + +L +IV + ++ + +RL + +EL+++ L GY+P YGARPL+
Sbjct: 765 DQIIFHSLRREELRQIVTLQVERLRQRLAERKLELSLSDGAADWLANAGYDPVYGARPLK 824
Query: 237 RAIGRLLEDNLAEIILTGYIQVGDSVTMDCDS 268
RA+ R LE +A+ IL G G +++++ ++
Sbjct: 825 RAVQRELETPIAKAILAGRYSEGQAISVELEA 856
>gi|187934747|ref|YP_001884953.1| ATP-dependent chaperone ClpB [Clostridium botulinum B str. Eklund
17B]
gi|187722900|gb|ACD24121.1| ATP-dependent chaperone ClpB [Clostridium botulinum B str. Eklund
17B]
Length = 868
Score = 310 bits (795), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 150/265 (56%), Positives = 198/265 (74%), Gaps = 6/265 (2%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++D NRPI SF+F GPTGVGKTELA LA F S+E ++RIDMSEYMEKH+VS+
Sbjct: 593 RARAGLKDINRPIGSFIFLGPTGVGKTELAKTLARNLFDSEENIIRIDMSEYMEKHSVSR 652
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG++ GGQLTEAVR P+SV+LFDEIEKAH DV N+ LQ+LDDGR+TD KG+
Sbjct: 653 LVGAPPGYVGYDEGGQLTEAVRRNPYSVVLFDEIEKAHDDVFNIFLQILDDGRLTDNKGK 712
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAE----ELRRRFRPEFLNRIDEVIV 180
TVD KNTIIIMTSNIG + + D +E + E +L+ RF+PEFLNR+D++I+
Sbjct: 713 TVDFKNTIIIMTSNIGSNYLLENK--SEDYIESSIKEDVMNQLKLRFKPEFLNRVDDIIM 770
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F+ L++ + +I+DI L E+ RL+ KN+EL VT + K +++EGYNP YGARPL+R I
Sbjct: 771 FKPLSENGIKKIIDIFLDEVKNRLKDKNIELEVTDSAKSIMVKEGYNPIYGARPLKRYIQ 830
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMD 265
LE++LA +I+ G + G V +D
Sbjct: 831 NTLENSLARMIIKGDLIYGSKVIVD 855
>gi|354566494|ref|ZP_08985666.1| ATP-dependent chaperone ClpB [Fischerella sp. JSC-11]
gi|353545510|gb|EHC14961.1| ATP-dependent chaperone ClpB [Fischerella sp. JSC-11]
Length = 874
Score = 310 bits (795), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 151/265 (56%), Positives = 192/265 (72%), Gaps = 6/265 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRPI+SF+F GPTGVGKTELA ALA F ++EAMVRIDMSEYMEKHT
Sbjct: 590 AIQRSRAGLADPNRPIASFIFLGPTGVGKTELAKALAAYLFDTEEAMVRIDMSEYMEKHT 649
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTEA+R RP++VILFDEIEKAH DV NVMLQ+LDDGR+TD
Sbjct: 650 VSRLIGAPPGYVGYDEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNVMLQILDDGRLTDA 709
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD----QMERGVAEELRRRFRPEFLNRIDE 177
+G TVD KNT++IMTSNIG I + G D +M V E +R FRPEFLNRIDE
Sbjct: 710 QGHTVDFKNTVVIMTSNIGSQYIL--DVAGDDSKYEEMRDRVMEAMRANFRPEFLNRIDE 767
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+F L QL EIV + ++ + +RL + + L ++ L + GY+P YGARPL+R
Sbjct: 768 IIIFHSLQSQQLREIVKLQVQRLEQRLVERKLALKLSEEALDWLAQVGYDPVYGARPLKR 827
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSV 262
AI LE +A+ IL G GD++
Sbjct: 828 AIQTELETPIAKAILRGEFHEGDTI 852
>gi|33862722|ref|NP_894282.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Prochlorococcus marinus str. MIT 9313]
gi|54035808|sp|Q7V8B1.1|CLPB_PROMM RecName: Full=Chaperone protein ClpB
gi|33634638|emb|CAE20624.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Prochlorococcus marinus str. MIT 9313]
Length = 865
Score = 310 bits (795), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 157/282 (55%), Positives = 201/282 (71%), Gaps = 12/282 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRPI+SFLF GPTGVGKTEL+ ALA + F S+ A+VRIDMSEYMEKH+
Sbjct: 589 AIQRSRAGLSDPNRPIASFLFLGPTGVGKTELSKALASQLFDSEAALVRIDMSEYMEKHS 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEAVR RP++VILFDE+EKAH+DV NVMLQ+LDDGRVTDG
Sbjct: 649 VSRLIGAPPGYVGYEAGGQLTEAVRRRPYAVILFDEVEKAHQDVFNVMLQILDDGRVTDG 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD-----QMERGVAEELRRRFRPEFLNRID 176
+G+TVD NT++I+TSNIG I LG D +MER V + L FRPEFLNR+D
Sbjct: 709 QGRTVDFTNTVLILTSNIGSQSILD---LGGDDSQYREMERRVHDALHAHFRPEFLNRLD 765
Query: 177 EVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLR 236
E I+F L + +L +IV + + + ERL + + L ++ T L GY+P YGARPL+
Sbjct: 766 ETIIFHSLRREELRQIVALQVNRLRERLCDRKLGLEISDTAADWLANAGYDPVYGARPLK 825
Query: 237 RAIGRLLEDNLAEIILTGYIQVGDS--VTMDCDSGGNVIMYR 276
RAI R LE +A+ IL G GDS V +D D + +R
Sbjct: 826 RAIQRELETPIAKSILAGL--YGDSQIVHVDVDVDQERLSFR 865
>gi|81299898|ref|YP_400106.1| ATPase [Synechococcus elongatus PCC 7942]
gi|81168779|gb|ABB57119.1| ATPase [Synechococcus elongatus PCC 7942]
Length = 883
Score = 310 bits (795), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 153/271 (56%), Positives = 195/271 (71%), Gaps = 6/271 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DP RPI+SF+F GPTGVGKTELA ALA F +++AM+RIDMSEYMEKH
Sbjct: 598 AIQRSRAGLSDPKRPIASFIFLGPTGVGKTELAKALAAYLFDTEDAMIRIDMSEYMEKHA 657
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTEAVR RP+SVILFDEIEKAH DV NVMLQ+LDDGRVTD
Sbjct: 658 VSRLIGAPPGYVGYDEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRVTDS 717
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD----QMERGVAEELRRRFRPEFLNRIDE 177
+G+TVD KNTI+I+TSNIG I + G D +M V E LR FRPEFLNR+DE
Sbjct: 718 RGRTVDFKNTILILTSNIGSQYIL--DVAGDDSRYEEMRSRVTEALRANFRPEFLNRVDE 775
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
I+F L K QL +IV I L + ERL + + L+++ L+E G++P YGARPL+R
Sbjct: 776 TIIFHSLRKDQLQQIVRIQLHRLEERLSDRKLSLSMSPEAIDFLVEIGFDPVYGARPLKR 835
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDS 268
I R LE +A+ IL G GD++ + ++
Sbjct: 836 VIQRELETAIAKAILRGQFSDGDTIQVAVEN 866
>gi|124023532|ref|YP_001017839.1| ATP-dependent Clp protease Hsp 100, ATP-binding subunit ClpB
[Prochlorococcus marinus str. MIT 9303]
gi|123963818|gb|ABM78574.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Prochlorococcus marinus str. MIT 9303]
Length = 863
Score = 310 bits (795), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 155/280 (55%), Positives = 199/280 (71%), Gaps = 10/280 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRPI+SFLF GPTGVGKTEL+ ALA + F S+ A+VRIDMSEYMEKH+
Sbjct: 589 AIQRSRAGLSDPNRPIASFLFLGPTGVGKTELSKALASQLFDSEAALVRIDMSEYMEKHS 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEAVR RP++VILFDE+EKAH DV NVMLQ+LDDGRVTDG
Sbjct: 649 VSRLIGAPPGYVGYEAGGQLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDG 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD-----QMERGVAEELRRRFRPEFLNRID 176
+G+TVD NT++I+TSNIG I LG D +MER V + L FRPEFLNR+D
Sbjct: 709 QGRTVDFTNTVLILTSNIGSQSILD---LGGDDSQYGEMERRVHDALHAHFRPEFLNRLD 765
Query: 177 EVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLR 236
E I+F L + +L +IV + + + ERL + + L ++ T L GY+P YGARPL+
Sbjct: 766 ETIIFHSLRREELRQIVALQVNRLRERLGDRKLGLEISDTAADWLANAGYDPVYGARPLK 825
Query: 237 RAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYR 276
RAI R LE +A+ IL G+ GDS + D + +R
Sbjct: 826 RAIQRELETPIAKSILAGF--YGDSQIVHVDVDEERLSFR 863
>gi|345856613|ref|ZP_08809088.1| ATP-dependent chaperone ClpB [Desulfosporosinus sp. OT]
gi|344330288|gb|EGW41591.1| ATP-dependent chaperone ClpB [Desulfosporosinus sp. OT]
Length = 865
Score = 310 bits (795), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 153/272 (56%), Positives = 197/272 (72%), Gaps = 4/272 (1%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DPNRP+ SFLF GPTGVGKTELA ALA F ++AMVRIDMSEYMEKHTV++
Sbjct: 589 RARAGLQDPNRPLGSFLFLGPTGVGKTELARALAEFLFDDEQAMVRIDMSEYMEKHTVAR 648
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E GGQLTE VR +P+SVILFDEIEKAH DV NV+LQLLDDGR+TDG+G+
Sbjct: 649 LIGAPPGYVGYEEGGQLTEVVRRKPYSVILFDEIEKAHSDVTNVLLQLLDDGRLTDGQGR 708
Query: 125 TVDLKNTIIIMTSNIGDSVI---ARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVF 181
V+ KNT++I+TSNI I AR S +++ + EELR FRPEFLNR+DEVIVF
Sbjct: 709 IVNFKNTVVILTSNIASPSIQDLARRSA-SQEEVRSTINEELRHHFRPEFLNRLDEVIVF 767
Query: 182 RQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGR 241
L + + IV+I L + ERL +N+ L +T + +L EGY+P YGARPL+R I +
Sbjct: 768 HPLERKHIGRIVEIQLGLLRERLSERNLTLELTEQARIQLANEGYDPVYGARPLKRVIQQ 827
Query: 242 LLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
L++ LA +L G + G + +D D G ++
Sbjct: 828 RLQNPLALKLLQGEFKEGQQILVDVDELGTIL 859
>gi|428201915|ref|YP_007080504.1| ATP-dependent chaperone ClpB [Pleurocapsa sp. PCC 7327]
gi|427979347|gb|AFY76947.1| ATP-dependent chaperone ClpB [Pleurocapsa sp. PCC 7327]
Length = 871
Score = 310 bits (795), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 151/270 (55%), Positives = 196/270 (72%), Gaps = 6/270 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRP +SF+F GPTGVGKTELA ALA F ++EAMVRIDMSEYMEKH+
Sbjct: 588 AIQRSRAGLADPNRPTASFIFLGPTGVGKTELAKALAASLFDTEEAMVRIDMSEYMEKHS 647
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEA+R RP+SVILFDEIEKAH DV NVMLQ+LDDGR+TD
Sbjct: 648 VSRLMGAPPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHADVFNVMLQILDDGRLTDS 707
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS----DQMERGVAEELRRRFRPEFLNRIDE 177
+G VD KNTIIIMTSNIG I + G ++M V + +R FRPEFLNRIDE
Sbjct: 708 QGHVVDFKNTIIIMTSNIGSQYIL--DLAGDESRYEEMRSRVMDAMRSSFRPEFLNRIDE 765
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+F L K +L +IV + ++ + +RL + + L ++ L E GY+P +GARPL+R
Sbjct: 766 IIIFHGLQKHELRQIVKLQVERLEQRLTEQKLSLKLSEAAIDFLAEIGYDPVFGARPLKR 825
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
AI R LE +A+ IL G + GD++ +D +
Sbjct: 826 AIQRYLETAIAKAILRGEFKPGDTIFVDVE 855
>gi|56750469|ref|YP_171170.1| ClpB protein [Synechococcus elongatus PCC 6301]
gi|56685428|dbj|BAD78650.1| ClpB protein [Synechococcus elongatus PCC 6301]
Length = 883
Score = 310 bits (794), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 153/271 (56%), Positives = 195/271 (71%), Gaps = 6/271 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DP RPI+SF+F GPTGVGKTELA ALA F +++AM+RIDMSEYMEKH
Sbjct: 598 AIQRSRAGLSDPKRPIASFIFLGPTGVGKTELAKALAAYLFDTEDAMIRIDMSEYMEKHA 657
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTEAVR RP+SVILFDEIEKAH DV NVMLQ+LDDGRVTD
Sbjct: 658 VSRLIGAPPGYVGYDEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRVTDS 717
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD----QMERGVAEELRRRFRPEFLNRIDE 177
+G+TVD KNTI+I+TSNIG I + G D +M V E LR FRPEFLNR+DE
Sbjct: 718 RGRTVDFKNTILILTSNIGSQYIL--DVAGDDSRYEEMRSRVTEALRANFRPEFLNRVDE 775
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
I+F L K QL +IV I L + ERL + + L+++ L+E G++P YGARPL+R
Sbjct: 776 TIIFHSLRKDQLQQIVRIQLHRLEERLSDRKLSLSMSPEAIDFLVEIGFDPVYGARPLKR 835
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDS 268
I R LE +A+ IL G GD++ + ++
Sbjct: 836 VIQRELETAIAKAILRGQFSDGDTIQVAVEN 866
>gi|21282209|ref|NP_645297.1| endopeptidase [Staphylococcus aureus subsp. aureus MW2]
gi|300912852|ref|ZP_07130294.1| clpc ATPase [Staphylococcus aureus subsp. aureus TCH70]
gi|418987425|ref|ZP_13535098.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1835]
gi|81762804|sp|Q8NXY8.1|CLPC_STAAW RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|21203645|dbj|BAB94345.1| endopeptidase [Staphylococcus aureus subsp. aureus MW2]
gi|300885956|gb|EFK81159.1| clpc ATPase [Staphylococcus aureus subsp. aureus TCH70]
gi|377719213|gb|EHT43383.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1835]
Length = 818
Score = 310 bits (794), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 152/272 (55%), Positives = 198/272 (72%), Gaps = 9/272 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+P GYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPLGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG----SD-----QMERGVAEELRRRFRPEFLNRI 175
TVD +NTIIIMTSN+G + + G SD + + + +EL+ FRPEFLNR+
Sbjct: 646 TVDFRNTIIIMTSNVGAQELQDQRFAGFGGSSDGQDYETIRKTMLKELKNSFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L K +L EIV +M+ ++ RL +N+ + VT K K+ EEGY+P YGARPL
Sbjct: 706 DDIIVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RAI + +EDNL+E+IL G G VT+D D
Sbjct: 766 IRAIQKTIEDNLSELILDGNQIEGKKVTVDHD 797
>gi|420264399|ref|ZP_14767030.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
sp. C1]
gi|394768372|gb|EJF48300.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
sp. C1]
Length = 826
Score = 310 bits (794), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 145/277 (52%), Positives = 203/277 (73%), Gaps = 9/277 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++ RAR G++DPNRPI SF+F GPTGVGKTELA ALA FGS++A+VR+DMSE+MEK++
Sbjct: 533 SIRRARSGLKDPNRPIGSFMFLGPTGVGKTELAKALAEAMFGSEDALVRVDMSEFMEKYS 592
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG++ GGQLTE +R +P+SVIL DE+EKAH DV N++LQ+LDDG +TD
Sbjct: 593 TSRLIGSPPGYVGYDEGGQLTEKIRSKPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDA 652
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+ VD +NTI+IMTSNIG I E +G M++ + EEL++ FRPEFL
Sbjct: 653 KGRKVDFRNTILIMTSNIGAQQIREEKSVGFNVTDLTKDHQAMQKRILEELKKAFRPEFL 712
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NR+DE +VF+ L + ++ EIV IM K I +RL ++++L +T + + + G++P YGA
Sbjct: 713 NRVDETVVFQSLGEGEIHEIVKIMSKAIIKRLGNQDIQLKITPSAIDVIGKAGFDPEYGA 772
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
RP+RRA+ + +ED L+E +L+G I +GD VT+ G
Sbjct: 773 RPIRRALQKEVEDRLSEALLSGQIHLGDKVTIGASKG 809
>gi|885934|gb|AAB09631.1| ClpB [Synechococcus elongatus PCC 7942]
Length = 883
Score = 310 bits (794), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 153/271 (56%), Positives = 195/271 (71%), Gaps = 6/271 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DP RPI+SF+F GPTGVGKTELA ALA F +++AM+RIDMSEYMEKH
Sbjct: 598 AIQRSRAGLSDPKRPIASFIFLGPTGVGKTELAKALAAYLFDTEDAMIRIDMSEYMEKHA 657
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTEAVR RP+SVILFDEIEKAH DV NVMLQ+LDDGRVTD
Sbjct: 658 VSRLIGAPPGYVGYDEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRVTDS 717
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD----QMERGVAEELRRRFRPEFLNRIDE 177
+G+TVD KNTI+I+TSNIG I + G D +M V E LR FRPEFLNR+DE
Sbjct: 718 RGRTVDFKNTILILTSNIGSQYIL--DVAGDDSRYEEMRSRVTEALRANFRPEFLNRVDE 775
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
I+F L K QL +IV I L + ERL + + L+++ L+E G++P YGARPL+R
Sbjct: 776 TIIFHSLRKDQLQQIVRIQLHRLEERLSDRKLSLSMSPEAIDFLVEIGFDPVYGARPLKR 835
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDS 268
I R LE +A+ IL G GD++ + ++
Sbjct: 836 VIQRELETAIAKAILRGQFSDGDTIQVAVEN 866
>gi|430371703|ref|ZP_19429425.1| ATP-dependent Clp protease [Enterococcus faecalis M7]
gi|429515041|gb|ELA04572.1| ATP-dependent Clp protease [Enterococcus faecalis M7]
Length = 372
Score = 310 bits (794), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 143/277 (51%), Positives = 202/277 (72%), Gaps = 9/277 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FGS+EA++R+DMSE+MEK++
Sbjct: 74 AIRRARSGLKDPARPIGSFMFLGPTGVGKTELAKALAEAMFGSEEALIRVDMSEFMEKYS 133
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG+E GGQLTE +R RP+SVIL DE+EKAH DV N++LQ+LDDG +TD
Sbjct: 134 TSRLIGSPPGYVGYEEGGQLTEKIRQRPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDA 193
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+ VD +NTI+IMTSN+G + I E +G + M++ + EEL++ FRPEFL
Sbjct: 194 KGRKVDFRNTILIMTSNLGATAIREEKHVGFNVKDISKNHELMQKRIMEELKKAFRPEFL 253
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE +VF L + ++ EIV IM + + +R+ + +++ +T + + + G++P YGA
Sbjct: 254 NRIDETVVFHSLKQEEIHEIVKIMSQSVVKRMAEQEVKVKITPAAIEVIGKVGFDPEYGA 313
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
RP+RRA+ + +ED L+E +L+G IQ+GD VT+ G
Sbjct: 314 RPIRRALQKEVEDRLSEALLSGQIQLGDKVTLGASKG 350
>gi|282900582|ref|ZP_06308524.1| ATPase [Cylindrospermopsis raciborskii CS-505]
gi|281194382|gb|EFA69337.1| ATPase [Cylindrospermopsis raciborskii CS-505]
Length = 871
Score = 310 bits (794), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 151/269 (56%), Positives = 196/269 (72%), Gaps = 6/269 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRPI+SF+F GPTGVGKTELA ALA F ++E++VRIDMSEYMEKHT
Sbjct: 589 AIQRSRAGLADPNRPIASFIFLGPTGVGKTELAKALAAYMFDTEESLVRIDMSEYMEKHT 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTE +R RP++VILFDEIEKAH DV N+ LQ+LDDGRVTD
Sbjct: 649 VSRLIGAPPGYVGYEEGGQLTETIRRRPYAVILFDEIEKAHPDVFNIFLQILDDGRVTDS 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS----DQMERGVAEELRRRFRPEFLNRIDE 177
+G+TVD KNTIIIMTSNIG I + G D+M V E +R FRPEFLNRIDE
Sbjct: 709 QGRTVDFKNTIIIMTSNIGSQYIL--DVAGDDSRYDEMRHRVMETMRNSFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+F L K +L +IV + ++ + +RL + M L ++ + L E GY+P +GARPL+R
Sbjct: 767 IIIFHSLQKSELRKIVQLQVERLTQRLTDRKMSLELSGSALDFLAEVGYDPVFGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
A+ R LE +A+ IL G GD++ +D
Sbjct: 827 ALQRELETKIAKAILRGEFDEGDTIFVDV 855
>gi|336392462|ref|ZP_08573861.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus coryniformis subsp. torquens KCTC 3535]
Length = 830
Score = 310 bits (794), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 147/295 (49%), Positives = 205/295 (69%), Gaps = 9/295 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FGS++ M+R+DMSEYMEK++
Sbjct: 535 AIRRARSGLKDPQRPIGSFMFLGPTGVGKTELAKALAEAMFGSEDNMIRVDMSEYMEKYS 594
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ G+PPGYVG+E GGQLTE VR +P+SV+L DE+EKAH DV N++LQ+LDDG +TD
Sbjct: 595 TSRLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEVEKAHPDVFNILLQVLDDGYLTDS 654
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+ VD +NTI+IMTSN+G + + E +G M + EEL++ FRPEF+
Sbjct: 655 KGRRVDFRNTILIMTSNLGATALRDEKSVGFGAQKVQQDYKAMRSRILEELKKSFRPEFI 714
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDEV+VF L K +L +IV IM K + +RL +N+++ +T + + G++P YGA
Sbjct: 715 NRIDEVVVFHSLTKPELHQIVKIMAKNVLKRLHDQNIDVKITPAAIDVIAKAGFDPEYGA 774
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMTVCAR 287
RP+RRAI + +ED L+E +L+G+I+VG+SVT+ G + R T +
Sbjct: 775 RPIRRAIQQQVEDRLSEELLSGHIKVGESVTIGARKGEITVNVRDSESDTTPTVK 829
>gi|357048825|ref|ZP_09110059.1| hypothetical protein HMPREF9478_00042 [Enterococcus saccharolyticus
30_1]
gi|355384778|gb|EHG31836.1| hypothetical protein HMPREF9478_00042 [Enterococcus saccharolyticus
30_1]
Length = 824
Score = 310 bits (794), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 146/284 (51%), Positives = 204/284 (71%), Gaps = 9/284 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++ RAR G++DPNRPI SF+F GPTGVGKTELA ALA FGS++++VR+DMSE+MEK++
Sbjct: 531 SIRRARSGLKDPNRPIGSFMFLGPTGVGKTELAKALAEAMFGSEDSLVRVDMSEFMEKYS 590
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG++ GGQLTE +R +P+SVIL DE+EKAH DV N++LQ+LDDG +TD
Sbjct: 591 TSRLIGSPPGYVGYDEGGQLTEKIRSKPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDA 650
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+ VD +NTI+IMTSNIG I E +G M++ + EEL++ FRPEFL
Sbjct: 651 KGRKVDFRNTILIMTSNIGAQQIREEKNVGFNVVDLSKDHQAMQKRILEELKKAFRPEFL 710
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NR+DE +VFR L + ++ EIV IM K I +RL ++++L +T + + G++P YGA
Sbjct: 711 NRVDETVVFRSLGEDEIHEIVKIMSKAIIKRLSDQDIQLKITSAAIDVIGKAGFDPEYGA 770
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYR 276
RP+RRA+ + +ED L+E +L+G I +GD VT+ G + R
Sbjct: 771 RPIRRALQKEVEDRLSEALLSGQIHLGDRVTIGASKGSITLNVR 814
>gi|225175258|ref|ZP_03729254.1| ATPase AAA-2 domain protein [Dethiobacter alkaliphilus AHT 1]
gi|225169434|gb|EEG78232.1| ATPase AAA-2 domain protein [Dethiobacter alkaliphilus AHT 1]
Length = 818
Score = 310 bits (794), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 152/289 (52%), Positives = 204/289 (70%), Gaps = 9/289 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+R+DMSEYMEKHT
Sbjct: 526 AIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESLFGDEDAMIRLDMSEYMEKHT 585
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
++ GSPPGYVG+++GGQLTE VR +P+SVILFDEIEKAH +V NV+LQ+L+DGR+TDG
Sbjct: 586 TARLVGSPPGYVGYDDGGQLTEKVRRKPYSVILFDEIEKAHPEVFNVLLQVLEDGRLTDG 645
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+ VD +NT+IIMTSN+G + +++ +G + M+ V +EL+R FRPEFL
Sbjct: 646 KGRAVDFRNTVIIMTSNVGAGELKKQATMGFRAADREKTYEDMKGKVMDELKRTFRPEFL 705
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDEVIVF L + L EIV++ML E+ RL + L V+ K L +EGY+P+YGA
Sbjct: 706 NRIDEVIVFHPLEEEHLTEIVELMLDELARRLGDYEIRLEVSPEAKAFLAKEGYDPTYGA 765
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGS 281
RPLRR + + +ED ++E +L G D++ ++ G V GS
Sbjct: 766 RPLRRVLQKRIEDEVSEKMLRGDFTHNDTIQVNVQDDGLVFRKAEAVGS 814
>gi|418323135|ref|ZP_12934424.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
pettenkoferi VCU012]
gi|365230228|gb|EHM71338.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
pettenkoferi VCU012]
Length = 827
Score = 310 bits (794), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 149/280 (53%), Positives = 203/280 (72%), Gaps = 11/280 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEEDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDE+EKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEVEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFLNRI 175
TVD +NT+IIMTSN+G + + G + + + + +EL+ FRPEFLNR+
Sbjct: 646 TVDFRNTVIIMTSNVGAQELQDQRFAGFGGASENNDYETIRKTMMKELKNAFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L++ +L EIV +M+ ++ +RL +++ + VT K K+ EEGY+P YGARPL
Sbjct: 706 DDIIVFHKLSQDELKEIVTMMVNKLTDRLAEQDIVIKVTDAAKAKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMY 275
RAI + +EDNL+E+IL G G V +D D GN Y
Sbjct: 766 IRAIQKTVEDNLSELILAGNQLEGKDVIIDHD--GNEFQY 803
>gi|93141242|sp|P53533.3|CLPB1_SYNE7 RecName: Full=Chaperone protein ClpB 1
Length = 874
Score = 310 bits (794), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 153/271 (56%), Positives = 195/271 (71%), Gaps = 6/271 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DP RPI+SF+F GPTGVGKTELA ALA F +++AM+RIDMSEYMEKH
Sbjct: 589 AIQRSRAGLSDPKRPIASFIFLGPTGVGKTELAKALAAYLFDTEDAMIRIDMSEYMEKHA 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTEAVR RP+SVILFDEIEKAH DV NVMLQ+LDDGRVTD
Sbjct: 649 VSRLIGAPPGYVGYDEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRVTDS 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD----QMERGVAEELRRRFRPEFLNRIDE 177
+G+TVD KNTI+I+TSNIG I + G D +M V E LR FRPEFLNR+DE
Sbjct: 709 RGRTVDFKNTILILTSNIGSQYIL--DVAGDDSRYEEMRSRVTEALRANFRPEFLNRVDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
I+F L K QL +IV I L + ERL + + L+++ L+E G++P YGARPL+R
Sbjct: 767 TIIFHSLRKDQLQQIVRIQLHRLEERLSDRKLSLSMSPEAIDFLVEIGFDPVYGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDS 268
I R LE +A+ IL G GD++ + ++
Sbjct: 827 VIQRELETAIAKAILRGQFSDGDTIQVAVEN 857
>gi|325567772|ref|ZP_08144383.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
casseliflavus ATCC 12755]
gi|325158545|gb|EGC70692.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
casseliflavus ATCC 12755]
Length = 829
Score = 310 bits (794), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 145/277 (52%), Positives = 203/277 (73%), Gaps = 9/277 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++ RAR G++DPNRPI SF+F GPTGVGKTELA ALA FGS++A+VR+DMSE+MEK++
Sbjct: 536 SIRRARSGLKDPNRPIGSFMFLGPTGVGKTELAKALAEAMFGSEDALVRVDMSEFMEKYS 595
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG++ GGQLTE +R +P+SVIL DE+EKAH DV N++LQ+LDDG +TD
Sbjct: 596 TSRLIGSPPGYVGYDEGGQLTEKIRSKPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDA 655
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+ VD +NTI+IMTSNIG I E +G M++ + EEL++ FRPEFL
Sbjct: 656 KGRKVDFRNTILIMTSNIGAQQIREEKSVGFNVTDLTKDHQAMQKRILEELKKAFRPEFL 715
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NR+DE +VF+ L + ++ EIV IM K I +RL ++++L +T + + + G++P YGA
Sbjct: 716 NRVDETVVFQSLGEGEIHEIVKIMSKAIIKRLGNQDIQLKITPSAIDVIGKAGFDPEYGA 775
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
RP+RRA+ + +ED L+E +L+G I +GD VT+ G
Sbjct: 776 RPIRRALQKEVEDRLSEALLSGQIHLGDKVTIGASKG 812
>gi|318041187|ref|ZP_07973143.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Synechococcus sp. CB0101]
Length = 872
Score = 310 bits (794), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 156/272 (57%), Positives = 194/272 (71%), Gaps = 8/272 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRPI+SFLF GPTGVGKTEL ALA + F S EAMVRIDMSEYMEKH
Sbjct: 587 AIQRSRAGLSDPNRPIASFLFLGPTGVGKTELCKALASQLFDSDEAMVRIDMSEYMEKHA 646
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEAVR RP++VILFDE+EKAH DV NVMLQ+LDDGRVTDG
Sbjct: 647 VSRLIGAPPGYVGYEEGGQLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDG 706
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD-----QMERGVAEELRRRFRPEFLNRID 176
+G+TVD NT++I+TSNIG I L D +ME V E LR FRPEFLNR+D
Sbjct: 707 QGRTVDFTNTVLILTSNIGSQSILD---LAGDPERHSEMEARVNEALRGHFRPEFLNRLD 763
Query: 177 EVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLR 236
E I+F L + +L +IV++ ++ + +RLE K + L + L GY+P YGARPL+
Sbjct: 764 ETIIFHSLKQDELRQIVELQVQRLAKRLEDKKLGLQLNADALDWLAGVGYDPVYGARPLK 823
Query: 237 RAIGRLLEDNLAEIILTGYIQVGDSVTMDCDS 268
RAI R LE +A+ IL G G +V +D S
Sbjct: 824 RAIQRELETPIAKGILGGQFTGGHTVAVDVAS 855
>gi|257871152|ref|ZP_05650805.1| ATP-dependent Clp protease [Enterococcus gallinarum EG2]
gi|257805316|gb|EEV34138.1| ATP-dependent Clp protease [Enterococcus gallinarum EG2]
Length = 827
Score = 310 bits (794), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 146/284 (51%), Positives = 204/284 (71%), Gaps = 9/284 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++ RAR G++DPNRPI SF+F GPTGVGKTELA ALA FGS++++VR+DMSE+MEK++
Sbjct: 534 SIRRARSGLKDPNRPIGSFMFLGPTGVGKTELAKALAEAMFGSEDSLVRVDMSEFMEKYS 593
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG++ GGQLTE +R +P+SVIL DE+EKAH DV N++LQ+LDDG +TD
Sbjct: 594 TSRLIGSPPGYVGYDEGGQLTEKIRSKPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDA 653
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+ VD +NTI+IMTSNIG I E +G M++ + EEL++ FRPEFL
Sbjct: 654 KGRKVDFRNTILIMTSNIGAQQIREEKNVGFNVVDLSKDHQAMQKRILEELKKAFRPEFL 713
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NR+DE +VFR L + ++ EIV IM K I +RL ++++L +T + + G++P YGA
Sbjct: 714 NRVDETVVFRSLGEDEIHEIVKIMSKAIIKRLSDQDIQLKITSAAIDVIGKAGFDPEYGA 773
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYR 276
RP+RRA+ + +ED L+E +L+G I +GD VT+ G + R
Sbjct: 774 RPIRRALQKEVEDRLSEALLSGQIHLGDRVTIGASKGSITLNVR 817
>gi|406830251|ref|ZP_11089845.1| ATP-dependent chaperone ClpB [Schlesneria paludicola DSM 18645]
Length = 871
Score = 310 bits (794), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 151/269 (56%), Positives = 196/269 (72%), Gaps = 1/269 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G++DP+RPI SF+F GPTGVGKTEL ALA F + AMVRIDMSE+MEKH+
Sbjct: 595 AVRRSRSGLQDPHRPIGSFIFLGPTGVGKTELCKALAEFLFDDERAMVRIDMSEFMEKHS 654
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG+E GG+LTEAVR RP+SV+L DEIEKAHRDV NV+LQLLDDGR+TD
Sbjct: 655 VARLIGAPPGYVGYEEGGKLTEAVRRRPYSVLLLDEIEKAHRDVFNVLLQLLDDGRLTDS 714
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD-QMERGVAEELRRRFRPEFLNRIDEVIV 180
G+TVD NTI++MTSNIG I + D +++R V + LR+ F PEFLNR+DEVIV
Sbjct: 715 HGRTVDFTNTIVVMTSNIGSQTIMDLTDKEDDKEIQRRVLQALRKEFLPEFLNRVDEVIV 774
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L K ++ +IVD+ L + +RLE L VT +K+L EEGY+P YGARPL+R I
Sbjct: 775 FHPLGKNEIRQIVDLQLVRLEKRLEENGFTLVVTDAARKQLAEEGYDPVYGARPLKRVIQ 834
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
+ L++ LA IL G G ++T+D +G
Sbjct: 835 QRLQNELANAILGGDFAEGATITIDVQNG 863
>gi|416401055|ref|ZP_11687155.1| ClpB protein [Crocosphaera watsonii WH 0003]
gi|357262155|gb|EHJ11339.1| ClpB protein [Crocosphaera watsonii WH 0003]
Length = 872
Score = 310 bits (794), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 151/270 (55%), Positives = 196/270 (72%), Gaps = 6/270 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DP+RP +SF+F GPTGVGKTELA ALA F ++EA+VRIDMSEYMEKH+
Sbjct: 589 AIQRSRAGLSDPDRPTASFIFLGPTGVGKTELAKALAKNLFDTEEAIVRIDMSEYMEKHS 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTEA+R RP+SVILFDEIEKAH DV N+MLQ+LDDGR+TD
Sbjct: 649 VSRLIGAPPGYVGYDEGGQLTEAIRRRPYSVILFDEIEKAHGDVFNIMLQILDDGRLTDS 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS----DQMERGVAEELRRRFRPEFLNRIDE 177
+G+ VD KNTIIIMTSNIG I + G D+M V E +R FRPEFLNRIDE
Sbjct: 709 QGRVVDFKNTIIIMTSNIGSQYIL--DVAGDDTRYDEMRSRVMEAMRNSFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+F L K QL EIV + ++ + RLE + M L + + + GY+P YGARPL+R
Sbjct: 767 IIIFHSLQKEQLREIVKLQVQLLRSRLEDQKMSLKLADIALDFVADIGYDPVYGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
A+ R LE +A+ IL G + GD++ +D +
Sbjct: 827 AVQRYLETPIAKSILRGEFKAGDTIFVDVE 856
>gi|225873988|ref|YP_002755447.1| ATP-dependent chaperone protein ClpB [Acidobacterium capsulatum
ATCC 51196]
gi|225792293|gb|ACO32383.1| ATP-dependent chaperone protein ClpB [Acidobacterium capsulatum
ATCC 51196]
Length = 874
Score = 310 bits (794), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 147/277 (53%), Positives = 202/277 (72%), Gaps = 3/277 (1%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DP RPI SF+F GPTGVGKTE A ALA F ++AM+RIDMSEYMEKH
Sbjct: 589 AIRRSRAGLSDPKRPIGSFIFLGPTGVGKTETARALAEFLFDDEQAMIRIDMSEYMEKHA 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG++ GGQLTEAVR RP+SV+LFDEIEKAH DV NV+LQ+LDDGR+TD
Sbjct: 649 VARLIGAPPGYVGYDEGGQLTEAVRRRPYSVVLFDEIEKAHPDVFNVLLQVLDDGRLTDS 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESI---LGSDQMERGVAEELRRRFRPEFLNRIDEV 178
KG+TVD KNT++IMTSN+G + E++ +Q V E LR+ FRPEFLNR+D++
Sbjct: 709 KGRTVDFKNTVLIMTSNLGAQALHAEALQDEAAFEQAREQVMEVLRQSFRPEFLNRVDDI 768
Query: 179 IVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRA 238
++FR L + QL+ IVD+ LK++ + L+ +++ + +T + +L GY+ +YGARPL+RA
Sbjct: 769 VIFRPLGEAQLVHIVDLRLKDLEQLLKERHITIELTDAARHQLFLSGYDRAYGARPLKRA 828
Query: 239 IGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMY 275
+ RL++D LA IL G + GD V +D D N + +
Sbjct: 829 MQRLIQDPLAMRILDGEVLHGDHVRIDADPLKNQLSF 865
>gi|67923982|ref|ZP_00517435.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal
[Crocosphaera watsonii WH 8501]
gi|67854157|gb|EAM49463.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal
[Crocosphaera watsonii WH 8501]
Length = 872
Score = 310 bits (794), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 151/270 (55%), Positives = 196/270 (72%), Gaps = 6/270 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DP+RP +SF+F GPTGVGKTELA ALA F ++EA+VRIDMSEYMEKH+
Sbjct: 589 AIQRSRAGLSDPDRPTASFIFLGPTGVGKTELAKALAKNLFDTEEAIVRIDMSEYMEKHS 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTEA+R RP+SVILFDEIEKAH DV N+MLQ+LDDGR+TD
Sbjct: 649 VSRLIGAPPGYVGYDEGGQLTEAIRRRPYSVILFDEIEKAHGDVFNIMLQILDDGRLTDS 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS----DQMERGVAEELRRRFRPEFLNRIDE 177
+G+ VD KNTIIIMTSNIG I + G D+M V E +R FRPEFLNRIDE
Sbjct: 709 QGRVVDFKNTIIIMTSNIGSQYIL--DVAGDDTRYDEMRSRVMEAMRNSFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+F L K QL EIV + ++ + RLE + M L + + + GY+P YGARPL+R
Sbjct: 767 IIIFHSLQKEQLREIVKLQVQLLRSRLEDQKMSLKLADISLDFVADIGYDPVYGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
A+ R LE +A+ IL G + GD++ +D +
Sbjct: 827 AVQRYLETPIAKSILRGEFKAGDTIFVDVE 856
>gi|298491220|ref|YP_003721397.1| ATP-dependent chaperone ClpB ['Nostoc azollae' 0708]
gi|298233138|gb|ADI64274.1| ATP-dependent chaperone ClpB ['Nostoc azollae' 0708]
Length = 872
Score = 310 bits (794), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 153/269 (56%), Positives = 193/269 (71%), Gaps = 6/269 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRPI+SF+F GPTGVGKTELA ALA F S+E++VRIDMSEYM+KHT
Sbjct: 589 AIQRSRAGLADPNRPIASFVFLGPTGVGKTELAKALAAYMFDSEESLVRIDMSEYMDKHT 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEA+R RP++VILFDEIEKAH DV N++LQ+LDDGRVTD
Sbjct: 649 VSRLIGAPPGYVGYEEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNILLQILDDGRVTDS 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD----QMERGVAEELRRRFRPEFLNRIDE 177
+ +TVD KNTIIIMTSNIG I G D +M V E +R FRPEFLNRIDE
Sbjct: 709 QARTVDFKNTIIIMTSNIGSQYIL--DFAGDDSRYSEMRHRVMEAMRNSFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
VI+F L K +L +IV + + + +RL K M L + L + GY+P +GARPL+R
Sbjct: 767 VIIFHSLQKSELRQIVQLQVDRLRQRLSDKKMSLRLAGAALDFLAQVGYDPVFGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
AI R LE +A+ IL G GD++ +D
Sbjct: 827 AIQRELETQIAKAILRGEFSDGDTIFVDV 855
>gi|322421265|ref|YP_004200488.1| ATP-dependent chaperone ClpB [Geobacter sp. M18]
gi|320127652|gb|ADW15212.1| ATP-dependent chaperone ClpB [Geobacter sp. M18]
Length = 871
Score = 310 bits (794), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 148/273 (54%), Positives = 198/273 (72%), Gaps = 1/273 (0%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G+ DPNRPI SF+F GPTGVGKTE A ALA F +A+VR DMSEY EKHTV++
Sbjct: 590 RARSGLSDPNRPIGSFIFLGPTGVGKTETARALASFLFDDDQAIVRFDMSEYQEKHTVAR 649
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E GGQLTEAVR RP+ ++LFDEIEKAH +V NV LQ+LDDGR+TDG+G+
Sbjct: 650 LIGAPPGYVGYEEGGQLTEAVRRRPYCIVLFDEIEKAHPEVFNVFLQILDDGRLTDGQGR 709
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVFRQL 184
TVD KN +IIMTSN+G I + +M+ V E LR F+PEFLNR+DE++++ L
Sbjct: 710 TVDFKNAVIIMTSNLGSQWIQQYGATDYARMQSEVMETLREAFKPEFLNRVDEIVIYHAL 769
Query: 185 NKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGRLLE 244
++ EIV I L+ + RLE K++ L VT ++ L EGY+P+YGARPL+RA+ R ++
Sbjct: 770 PLERIKEIVSIQLQSLTRRLEEKSIGLQVTDQAQEFLAREGYDPAYGARPLKRALQRKIQ 829
Query: 245 DNLAEIILTGYIQVGDSVTMD-CDSGGNVIMYR 276
D LA ++L G GD+V +D D GG++++ +
Sbjct: 830 DPLALMLLEGKFGPGDAVQVDVADGGGSLVIAK 862
>gi|126656761|ref|ZP_01727975.1| ClpB protein [Cyanothece sp. CCY0110]
gi|126621981|gb|EAZ92689.1| ClpB protein [Cyanothece sp. CCY0110]
Length = 872
Score = 310 bits (794), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 151/270 (55%), Positives = 195/270 (72%), Gaps = 6/270 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRP +SF+F GPTGVGKTELA ALA F ++EA+VRIDMSEYMEKH+
Sbjct: 589 AIQRSRAGLADPNRPTASFIFLGPTGVGKTELAKALAKNLFDTEEAIVRIDMSEYMEKHS 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTEA+R RP+SVILFDEIEKAH DV N+MLQ+LDDGR+TD
Sbjct: 649 VSRLIGAPPGYVGYDEGGQLTEAIRRRPYSVILFDEIEKAHGDVFNIMLQILDDGRLTDS 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS----DQMERGVAEELRRRFRPEFLNRIDE 177
+G+ VD KNTIIIMTSNIG I + G D+M V + +R FRPEFLNRIDE
Sbjct: 709 QGRVVDFKNTIIIMTSNIGSQYIL--DVAGDDTRYDEMRSRVMDAMRNNFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+F L K QL EIV + ++ + RLE + M L + + + GY+P YGARPL+R
Sbjct: 767 IIIFHSLQKEQLREIVKLQIQLLRNRLEDQKMSLKLADVALDFVADIGYDPVYGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
A+ R LE +A+ IL G + GD++ D +
Sbjct: 827 AVQRYLETPIAKSILRGEFKAGDTIFADVE 856
>gi|227547847|ref|ZP_03977896.1| ATP-dependent protease regulatory subunit, ClpB [Corynebacterium
lipophiloflavum DSM 44291]
gi|227080081|gb|EEI18044.1| ATP-dependent protease regulatory subunit, ClpB [Corynebacterium
lipophiloflavum DSM 44291]
Length = 852
Score = 310 bits (794), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 146/269 (54%), Positives = 203/269 (75%), Gaps = 11/269 (4%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
R+R G+ DPNRPI SFLF GPTGVGKTELA +LA F + AMVRIDMSEY EKH+V++
Sbjct: 589 RSRAGVADPNRPIGSFLFLGPTGVGKTELAKSLAEFLFDDETAMVRIDMSEYGEKHSVAR 648
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG++ GGQLTEAVR RP+S++LFDE+EKAH+DV +V+LQ+LD+GR+TDG+G+
Sbjct: 649 LVGAPPGYVGYDAGGQLTEAVRRRPYSLVLFDEVEKAHQDVFDVLLQVLDEGRLTDGQGR 708
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVFRQL 184
TVD +NT+II+TSN+G + RE I+ E ++R F+PEF+NR+D+V+VF L
Sbjct: 709 TVDFRNTVIILTSNLG-AGGGREEIM----------EAVKRHFKPEFINRLDDVVVFEPL 757
Query: 185 NKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGRLLE 244
+ L+ IVDI L+++ +RL ++ + LTV+ + K L E GY+P+YGARPLRR I + +
Sbjct: 758 SSELLVGIVDIQLEQLAQRLTSRRLTLTVSDSAKAWLAERGYDPAYGARPLRRLIQQAIG 817
Query: 245 DNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
D LA+ +L GY++ GD+V +D GG +
Sbjct: 818 DRLAKELLAGYVRDGDTVAVDVADGGEAL 846
>gi|427419377|ref|ZP_18909560.1| ATP-dependent chaperone ClpB [Leptolyngbya sp. PCC 7375]
gi|425762090|gb|EKV02943.1| ATP-dependent chaperone ClpB [Leptolyngbya sp. PCC 7375]
Length = 868
Score = 310 bits (793), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 152/271 (56%), Positives = 200/271 (73%), Gaps = 6/271 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRP +SF+F GPTGVGKTELA ALA F ++EA+VRIDMSEYMEKH
Sbjct: 589 AIQRSRAGLADPNRPTASFIFLGPTGVGKTELAKALASYLFDTEEAIVRIDMSEYMEKHA 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTEA+R RP+SVILFDEIEKAH DV N+MLQ+LDDGRVTD
Sbjct: 649 VSRLIGAPPGYVGYDEGGQLTEALRRRPYSVILFDEIEKAHPDVFNIMLQILDDGRVTDS 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD----QMERGVAEELRRRFRPEFLNRIDE 177
+G+TVD KN++IIMTSNIG I + G D +M V + LR FRPEFLNR+DE
Sbjct: 709 QGRTVDFKNSVIIMTSNIGSQFIL--DVAGDDSRYEEMRTRVMDVLRSSFRPEFLNRVDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+F L K QL EIV + ++ + +RL + + L+++ + L + GY+P YGARPL+R
Sbjct: 767 MIIFHSLQKSQLREIVKLQVQALEKRLADQKIGLSLSESALDFLADVGYDPVYGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDS 268
AI R LE +A+ IL G + GD+V +D ++
Sbjct: 827 AIQRELETAIAKSILRGDYKGGDTVVVDVEN 857
>gi|333396625|ref|ZP_08478442.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus coryniformis subsp. coryniformis KCTC
3167]
Length = 829
Score = 310 bits (793), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 145/277 (52%), Positives = 201/277 (72%), Gaps = 9/277 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FGS++ M+R+DMSEYMEK++
Sbjct: 534 AIRRARSGLKDPQRPIGSFMFLGPTGVGKTELAKALAEAMFGSEDNMIRVDMSEYMEKYS 593
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ G+PPGYVG+E GGQLTE VR +P+SV+L DE+EKAH DV N++LQ+LDDG +TD
Sbjct: 594 TSRLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEVEKAHPDVFNILLQVLDDGYLTDS 653
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+ VD +NTI+IMTSN+G + + E +G M + EEL++ FRPEF+
Sbjct: 654 KGRRVDFRNTILIMTSNLGATALRDEKSVGFGAQKVQQDYKAMRSRILEELKKSFRPEFI 713
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDEV+VF L K +L +IV IM K + +RL +N+++ +T + + G++P YGA
Sbjct: 714 NRIDEVVVFHSLTKPELHQIVKIMAKNVLKRLHDQNIDVKITPAAIDVIAKAGFDPEYGA 773
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
RP+RRAI + +ED L+E +L+G+I+VG+SVT+ G
Sbjct: 774 RPIRRAIQQQVEDRLSEELLSGHIKVGESVTIGARKG 810
>gi|302872270|ref|YP_003840906.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
obsidiansis OB47]
gi|302575129|gb|ADL42920.1| ATPase AAA-2 domain protein [Caldicellulosiruptor obsidiansis OB47]
Length = 829
Score = 310 bits (793), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 151/293 (51%), Positives = 206/293 (70%), Gaps = 11/293 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R RVG++DP RPI SF+F GPTGVGKTELA ALA FG+++AM+RIDMSEYMEK
Sbjct: 530 AIRRGRVGLKDPKRPIGSFIFLGPTGVGKTELARALAEALFGTEDAMIRIDMSEYMEKFN 589
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+E GGQLTE VR RP+SV+LFDEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 590 VSKLIGSPPGYVGYEEGGQLTEKVRRRPYSVVLFDEIEKAHPDVFNLLLQILDDGRLTDS 649
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG-----------SDQMERGVAEELRRRFRPE 170
+G+TV +NT+IIMTSNIG ++I LG ++++ V EL++ FRPE
Sbjct: 650 QGRTVSFRNTVIIMTSNIGANLITNPKKLGFSTSEDEKQKTYERIKENVMAELKKTFRPE 709
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNRIDE+IVF L++ + +IV+IMLK + ER++A T + + ++G++P +
Sbjct: 710 FLNRIDEIIVFHPLDEEDVKKIVEIMLKNLQERIKASEYYAEFTPALIEAIAKKGFDPVF 769
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMT 283
GARPL+RAI ++ED ++E IL G I+ GD +D VI+ + + + +
Sbjct: 770 GARPLKRAIQTMVEDKISEAILEGKIKQGDEFIVDFVDENTVIVKKEKTSTSS 822
>gi|422867278|ref|ZP_16913875.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX1467]
gi|329577560|gb|EGG58995.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX1467]
Length = 700
Score = 310 bits (793), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 143/277 (51%), Positives = 202/277 (72%), Gaps = 9/277 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FGS+EA++R+DMSE+MEK++
Sbjct: 402 AIRRARSGLKDPARPIGSFMFLGPTGVGKTELAKALAEAMFGSEEALIRVDMSEFMEKYS 461
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG+E GGQLTE +R RP+SVIL DE+EKAH DV N++LQ+LDDG +TD
Sbjct: 462 TSRLIGSPPGYVGYEEGGQLTEKIRQRPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDA 521
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+ VD +NTI+IMTSN+G + I E +G + M++ + EEL++ FRPEFL
Sbjct: 522 KGRKVDFRNTILIMTSNLGATAIREEKHVGFNVKDISKNHELMQKRIMEELKKAFRPEFL 581
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE +VF L + ++ EIV IM + + +R+ + +++ +T + + + G++P YGA
Sbjct: 582 NRIDETVVFHSLKQEEIHEIVKIMSQSVVKRMAEQEVKVKITPAAIEVIGKVGFDPEYGA 641
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
RP+RRA+ + +ED L+E +L+G IQ+GD VT+ G
Sbjct: 642 RPIRRALQKEVEDRLSEALLSGQIQLGDKVTLGASKG 678
>gi|148242005|ref|YP_001227162.1| chaperone ClpB [Synechococcus sp. RCC307]
gi|147850315|emb|CAK27809.1| Chaperone ClpB [Synechococcus sp. RCC307]
Length = 863
Score = 310 bits (793), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 152/271 (56%), Positives = 192/271 (70%), Gaps = 8/271 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DP RPI+SFLF GPTGVGKTEL+ ALA + F S +AMVRIDMSEYMEKH
Sbjct: 589 AIQRSRAGLSDPRRPIASFLFLGPTGVGKTELSKALANQLFDSDDAMVRIDMSEYMEKHA 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVGFE GGQLTEAVR RP++VILFDE+EKAH DV NVMLQ+LDDGRVTD
Sbjct: 649 VSRLIGAPPGYVGFEEGGQLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDS 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD-----QMERGVAEELRRRFRPEFLNRID 176
+G+TVD NT++I+TSNIG I LG D +ME V E LR FRPEFLNR+D
Sbjct: 709 QGRTVDFTNTVLILTSNIGSQSILD---LGGDDSRHSEMEERVNEALRAHFRPEFLNRLD 765
Query: 177 EVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLR 236
E I+F L +L IVD+ ++ + +RL + ++L ++ L GY+P YGARPL+
Sbjct: 766 ETIIFHSLRADELRHIVDLQVQRLAQRLAERKIQLELSARASDWLATAGYDPVYGARPLK 825
Query: 237 RAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RAI R LE +A+ IL G G + +D +
Sbjct: 826 RAIQRELETPIAKAILAGRYSEGSTAAVDVE 856
>gi|242061800|ref|XP_002452189.1| hypothetical protein SORBIDRAFT_04g021410 [Sorghum bicolor]
gi|241932020|gb|EES05165.1| hypothetical protein SORBIDRAFT_04g021410 [Sorghum bicolor]
Length = 957
Score = 310 bits (793), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 151/284 (53%), Positives = 204/284 (71%), Gaps = 11/284 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+RVG+ DP+RPI++ LF GPTGVGKTEL ALA YFGS+ AM+R+DMSEYME+HT
Sbjct: 657 AVKRSRVGLNDPDRPIATLLFCGPTGVGKTELTKALAASYFGSESAMLRLDMSEYMERHT 716
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGY+G+ G LTEAVR +P +V+L DEIEKAH D+ N++LQ+ +DG +TD
Sbjct: 717 VSKLIGSPPGYIGYGETGTLTEAVRRKPFTVVLMDEIEKAHPDIFNILLQIFEDGHLTDS 776
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA--RESI--LGSD-------QMERGVAEELRRRFRPE 170
+G+ V KNT+I+MTSN+G + I+ R+SI L D M+ V EEL+ FRPE
Sbjct: 777 QGRKVSFKNTLIVMTSNVGSTTISKGRQSIGFLKEDTESSSYFAMKSLVMEELKAFFRPE 836
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
LNRIDE++VFR L K Q++ I+DI+LKE+ RL A + L V+ K + +EGY+ SY
Sbjct: 837 LLNRIDEMVVFRPLEKTQMLAILDIILKEVKGRLLALGIGLEVSEAMKHLICQEGYDKSY 896
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
GARPLRRA+ ++ED ++E IL G + GD++ MD D+ G M
Sbjct: 897 GARPLRRAVAHIIEDVISEAILFGEFKPGDTILMDIDAEGKPCM 940
>gi|300861491|ref|ZP_07107575.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecalis TUSoD Ef11]
gi|422741397|ref|ZP_16795423.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX2141]
gi|428768366|ref|YP_007154477.1| Clp protease [Enterococcus faecalis str. Symbioflor 1]
gi|295114559|emb|CBL33196.1| ATPases with chaperone activity, ATP-binding subunit [Enterococcus
sp. 7L76]
gi|300848952|gb|EFK76705.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecalis TUSoD Ef11]
gi|315143909|gb|EFT87925.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX2141]
gi|427186539|emb|CCO73763.1| Clp protease [Enterococcus faecalis str. Symbioflor 1]
Length = 831
Score = 310 bits (793), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 143/277 (51%), Positives = 202/277 (72%), Gaps = 9/277 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FGS+EA++R+DMSE+MEK++
Sbjct: 533 AIRRARSGLKDPARPIGSFMFLGPTGVGKTELAKALAEAMFGSEEALIRVDMSEFMEKYS 592
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG+E GGQLTE +R RP+SVIL DE+EKAH DV N++LQ+LDDG +TD
Sbjct: 593 TSRLIGSPPGYVGYEEGGQLTEKIRQRPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDA 652
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+ VD +NTI+IMTSN+G + I E +G + M++ + EEL++ FRPEFL
Sbjct: 653 KGRKVDFRNTILIMTSNLGATAIREEKHVGFNVKDISKNHELMQKRIMEELKKAFRPEFL 712
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE +VF L + ++ EIV IM + + +R+ + +++ +T + + + G++P YGA
Sbjct: 713 NRIDETVVFHSLKQEEIHEIVKIMSQSVVKRMAEQEVKVKITPAAIEVIGKVGFDPEYGA 772
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
RP+RRA+ + +ED L+E +L+G IQ+GD VT+ G
Sbjct: 773 RPIRRALQKEVEDRLSEALLSGQIQLGDKVTLGASKG 809
>gi|420146514|ref|ZP_14653925.1| Chaperone protein ClpB [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
gi|398401747|gb|EJN55199.1| Chaperone protein ClpB [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
Length = 829
Score = 310 bits (793), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 145/277 (52%), Positives = 201/277 (72%), Gaps = 9/277 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FGS++ M+R+DMSEYMEK++
Sbjct: 534 AIRRARSGLKDPQRPIGSFMFLGPTGVGKTELAKALAEAMFGSEDNMIRVDMSEYMEKYS 593
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ G+PPGYVG+E GGQLTE VR +P+SV+L DE+EKAH DV N++LQ+LDDG +TD
Sbjct: 594 TSRLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEVEKAHPDVFNILLQVLDDGYLTDS 653
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+ VD +NTI+IMTSN+G + + E +G M + EEL++ FRPEF+
Sbjct: 654 KGRRVDFRNTILIMTSNLGATALRDEKSVGFGAQKVQQDYKAMRSRILEELKKSFRPEFI 713
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDEV+VF L K +L +IV IM K + +RL +N+++ +T + + G++P YGA
Sbjct: 714 NRIDEVVVFHSLTKPELHQIVKIMAKNVLKRLHDQNIDVKITPAAIDVIAKAGFDPEYGA 773
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
RP+RRAI + +ED L+E +L+G+I+VG+SVT+ G
Sbjct: 774 RPIRRAIQQQVEDRLSEELLSGHIKVGESVTIGARKG 810
>gi|257080312|ref|ZP_05574673.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis E1Sol]
gi|256988342|gb|EEU75644.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis E1Sol]
Length = 831
Score = 310 bits (793), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 143/277 (51%), Positives = 202/277 (72%), Gaps = 9/277 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FGS+EA++R+DMSE+MEK++
Sbjct: 533 AIRRARSGLKDPARPIGSFMFLGPTGVGKTELAKALAEAMFGSEEALIRVDMSEFMEKYS 592
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG+E GGQLTE +R RP+SVIL DE+EKAH DV N++LQ+LDDG +TD
Sbjct: 593 TSRLIGSPPGYVGYEEGGQLTEKIRQRPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDA 652
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+ VD +NTI+IMTSN+G + I E +G + M++ + EEL++ FRPEFL
Sbjct: 653 KGRKVDFRNTILIMTSNLGATAIREEKHVGFNVKDISKNHELMQKRIMEELKKAFRPEFL 712
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE +VF L + ++ EIV IM + + +R+ + +++ +T + + + G++P YGA
Sbjct: 713 NRIDETVVFHSLKQEEIHEIVKIMSQSVVKRMAEQEVKVKITPAAIEVIGKVGFDPEYGA 772
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
RP+RRA+ + +ED L+E +L+G IQ+GD VT+ G
Sbjct: 773 RPIRRALQKEVEDRLSEALLSGQIQLGDKVTLGASKG 809
>gi|29377725|ref|NP_816879.1| ATP-dependent Clp protease, ATP-binding protein ClpC [Enterococcus
faecalis V583]
gi|227517135|ref|ZP_03947184.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis TX0104]
gi|227555222|ref|ZP_03985269.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis HH22]
gi|257088425|ref|ZP_05582786.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis D6]
gi|257418098|ref|ZP_05595092.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis T11]
gi|422714244|ref|ZP_16770976.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0309A]
gi|422716305|ref|ZP_16773016.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0309B]
gi|422721899|ref|ZP_16778478.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX2137]
gi|424672474|ref|ZP_18109436.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis 599]
gi|424677514|ref|ZP_18114366.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV103]
gi|424680868|ref|ZP_18117664.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV116]
gi|424682811|ref|ZP_18119573.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV129]
gi|424688566|ref|ZP_18125171.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV25]
gi|424690735|ref|ZP_18127267.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV31]
gi|424694470|ref|ZP_18130873.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV37]
gi|424697804|ref|ZP_18134116.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV41]
gi|424701101|ref|ZP_18137278.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV62]
gi|424704695|ref|ZP_18140790.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV63]
gi|424711826|ref|ZP_18144038.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV65]
gi|424717779|ref|ZP_18147055.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV68]
gi|424721762|ref|ZP_18150839.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV72]
gi|424724563|ref|ZP_18153501.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV73]
gi|424727723|ref|ZP_18156352.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV81]
gi|424744327|ref|ZP_18172621.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV85]
gi|424753742|ref|ZP_18181671.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV93]
gi|29345193|gb|AAO82949.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Enterococcus
faecalis V583]
gi|227075415|gb|EEI13378.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis TX0104]
gi|227175651|gb|EEI56623.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis HH22]
gi|256996455|gb|EEU83757.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis D6]
gi|257159926|gb|EEU89886.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis T11]
gi|315028021|gb|EFT39953.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX2137]
gi|315575413|gb|EFU87604.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0309B]
gi|315580852|gb|EFU93043.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0309A]
gi|402352709|gb|EJU87549.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV116]
gi|402354333|gb|EJU89144.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV103]
gi|402355646|gb|EJU90411.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis 599]
gi|402360230|gb|EJU94834.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV25]
gi|402363478|gb|EJU97957.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV31]
gi|402366381|gb|EJV00762.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV129]
gi|402370657|gb|EJV04854.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV37]
gi|402372546|gb|EJV06661.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV62]
gi|402374375|gb|EJV08400.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV41]
gi|402381195|gb|EJV14906.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV63]
gi|402382846|gb|EJV16484.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV65]
gi|402383726|gb|EJV17311.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV68]
gi|402390441|gb|EJV23784.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV72]
gi|402394441|gb|EJV27613.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV73]
gi|402395898|gb|EJV28978.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV81]
gi|402399294|gb|EJV32178.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV85]
gi|402403745|gb|EJV36401.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV93]
Length = 831
Score = 310 bits (793), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 143/277 (51%), Positives = 202/277 (72%), Gaps = 9/277 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FGS+EA++R+DMSE+MEK++
Sbjct: 533 AIRRARSGLKDPARPIGSFMFLGPTGVGKTELAKALAEAMFGSEEALIRVDMSEFMEKYS 592
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG+E GGQLTE +R RP+SVIL DE+EKAH DV N++LQ+LDDG +TD
Sbjct: 593 TSRLIGSPPGYVGYEEGGQLTEKIRQRPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDA 652
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+ VD +NTI+IMTSN+G + I E +G + M++ + EEL++ FRPEFL
Sbjct: 653 KGRKVDFRNTILIMTSNLGATAIREEKHVGFNVKDISKNHELMQKRIMEELKKAFRPEFL 712
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE +VF L + ++ EIV IM + + +R+ + +++ +T + + + G++P YGA
Sbjct: 713 NRIDETVVFHSLKQEEIHEIVKIMSQSVVKRMAEQEVKVKITPAAIEVIGKVGFDPEYGA 772
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
RP+RRA+ + +ED L+E +L+G IQ+GD VT+ G
Sbjct: 773 RPIRRALQKEVEDRLSEALLSGQIQLGDKVTLGASKG 809
>gi|255970546|ref|ZP_05421132.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis T1]
gi|256617980|ref|ZP_05474826.1| UvrB/UvrC protein [Enterococcus faecalis ATCC 4200]
gi|256958535|ref|ZP_05562706.1| UvrB/UvrC protein [Enterococcus faecalis DS5]
gi|257078149|ref|ZP_05572510.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis JH1]
gi|257091493|ref|ZP_05585854.1| ATP-dependent Clp protease ATP-binding subunit [Enterococcus
faecalis CH188]
gi|257420295|ref|ZP_05597285.1| ATP-dependent Clp protease [Enterococcus faecalis X98]
gi|294780724|ref|ZP_06746084.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis PC1.1]
gi|307270010|ref|ZP_07551335.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX4248]
gi|307274514|ref|ZP_07555695.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX2134]
gi|312899758|ref|ZP_07759078.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0470]
gi|312905574|ref|ZP_07764688.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0635]
gi|312953740|ref|ZP_07772573.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0102]
gi|384514494|ref|YP_005709587.1| ATPase/chaperone ClpC [Enterococcus faecalis OG1RF]
gi|397701405|ref|YP_006539193.1| clpC ATPase [Enterococcus faecalis D32]
gi|421513228|ref|ZP_15960008.1| ATP-dependent Clp protease [Enterococcus faecalis ATCC 29212]
gi|422690562|ref|ZP_16748612.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0630]
gi|422692538|ref|ZP_16750555.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0031]
gi|422694175|ref|ZP_16752177.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX4244]
gi|422698655|ref|ZP_16756547.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX1346]
gi|422700278|ref|ZP_16758127.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX1342]
gi|422708175|ref|ZP_16765709.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0043]
gi|422710749|ref|ZP_16767703.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0027]
gi|422726124|ref|ZP_16782578.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0312]
gi|422731699|ref|ZP_16788055.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0645]
gi|430356044|ref|ZP_19424742.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis OG1X]
gi|255961564|gb|EET94040.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis T1]
gi|256597507|gb|EEU16683.1| UvrB/UvrC protein [Enterococcus faecalis ATCC 4200]
gi|256949031|gb|EEU65663.1| UvrB/UvrC protein [Enterococcus faecalis DS5]
gi|256986179|gb|EEU73481.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis JH1]
gi|257000305|gb|EEU86825.1| ATP-dependent Clp protease ATP-binding subunit [Enterococcus
faecalis CH188]
gi|257162119|gb|EEU92079.1| ATP-dependent Clp protease [Enterococcus faecalis X98]
gi|294452164|gb|EFG20606.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis PC1.1]
gi|306508786|gb|EFM77875.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX2134]
gi|306513675|gb|EFM82282.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX4248]
gi|310628344|gb|EFQ11627.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0102]
gi|310631303|gb|EFQ14586.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0635]
gi|311293110|gb|EFQ71666.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0470]
gi|315035218|gb|EFT47150.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0027]
gi|315148386|gb|EFT92402.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX4244]
gi|315152751|gb|EFT96767.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0031]
gi|315154576|gb|EFT98592.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0043]
gi|315158946|gb|EFU02963.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0312]
gi|315162279|gb|EFU06296.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0645]
gi|315171228|gb|EFU15245.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX1342]
gi|315172856|gb|EFU16873.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX1346]
gi|315576520|gb|EFU88711.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0630]
gi|327536383|gb|AEA95217.1| ATPase/chaperone ClpC, probable specificity factor for ClpP
protease [Enterococcus faecalis OG1RF]
gi|397338044|gb|AFO45716.1| clpC ATPase [Enterococcus faecalis D32]
gi|401673667|gb|EJS80045.1| ATP-dependent Clp protease [Enterococcus faecalis ATCC 29212]
gi|429514421|gb|ELA03970.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis OG1X]
Length = 831
Score = 310 bits (793), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 143/277 (51%), Positives = 202/277 (72%), Gaps = 9/277 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FGS+EA++R+DMSE+MEK++
Sbjct: 533 AIRRARSGLKDPARPIGSFMFLGPTGVGKTELAKALAEAMFGSEEALIRVDMSEFMEKYS 592
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG+E GGQLTE +R RP+SVIL DE+EKAH DV N++LQ+LDDG +TD
Sbjct: 593 TSRLIGSPPGYVGYEEGGQLTEKIRQRPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDA 652
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+ VD +NTI+IMTSN+G + I E +G + M++ + EEL++ FRPEFL
Sbjct: 653 KGRKVDFRNTILIMTSNLGATAIREEKHVGFNVKDISKNHELMQKRIMEELKKAFRPEFL 712
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE +VF L + ++ EIV IM + + +R+ + +++ +T + + + G++P YGA
Sbjct: 713 NRIDETVVFHSLKQEEIHEIVKIMSQSVVKRMAEQEVKVKITPAAIEVIGKVGFDPEYGA 772
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
RP+RRA+ + +ED L+E +L+G IQ+GD VT+ G
Sbjct: 773 RPIRRALQKEVEDRLSEALLSGQIQLGDKVTLGASKG 809
>gi|386856960|ref|YP_006261137.1| putative Chaperone clpB [Deinococcus gobiensis I-0]
gi|380000489|gb|AFD25679.1| putative Chaperone clpB [Deinococcus gobiensis I-0]
Length = 852
Score = 310 bits (793), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 153/271 (56%), Positives = 195/271 (71%), Gaps = 2/271 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G+ DPNRP+ SF+F GPTGVGKTELA ALA F S EAMVR+DMSEYMEKHT
Sbjct: 573 AIRRARAGLNDPNRPLGSFMFLGPTGVGKTELAKALAEYLFDSSEAMVRLDMSEYMEKHT 632
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG+E GGQLTEAVR RP+SV+L DEIEKAH DV NV+LQ+LDDGR+TDG
Sbjct: 633 VARLIGAPPGYVGYEEGGQLTEAVRRRPYSVLLLDEIEKAHPDVFNVLLQVLDDGRLTDG 692
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQME--RGVAEELRRRFRPEFLNRIDEVI 179
+G+TVD +NT+II+TSNIG +I G D E V EL+ FRPEFLNR+D+++
Sbjct: 693 QGRTVDFRNTLIILTSNIGSPLILEMQARGEDAAEIREAVLGELQGHFRPEFLNRVDDIV 752
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF L+ L +IVDI + + RL + + L ++ K KL E GY+P++GARPL+RAI
Sbjct: 753 VFDALSAADLRKIVDIQMGGLRRRLTERRVTLHLSDGAKNKLAEIGYDPAFGARPLKRAI 812
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGG 270
R +E LA IL+G + G + +D GG
Sbjct: 813 AREIETPLAREILSGRVPDGSVLNVDYGDGG 843
>gi|289705692|ref|ZP_06502076.1| negative regulator of genetic competence ClpC/MecB [Micrococcus
luteus SK58]
gi|289557532|gb|EFD50839.1| negative regulator of genetic competence ClpC/MecB [Micrococcus
luteus SK58]
Length = 851
Score = 310 bits (793), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 145/280 (51%), Positives = 204/280 (72%), Gaps = 10/280 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R R G++DPNRP SF+F GPTGVGKTELA +LA FG ++A++ +DMSE+ EKHT
Sbjct: 535 AIRRTRAGLKDPNRPSGSFIFAGPTGVGKTELAKSLAEFLFGDEDALITLDMSEFQEKHT 594
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ FG+PPGYVG+E GGQLTE VR RP SV+LFDE+EKAH+D+ N +LQ+L+DGR+TD
Sbjct: 595 VSRLFGAPPGYVGYEEGGQLTEKVRRRPFSVVLFDEVEKAHQDLFNSLLQILEDGRLTDS 654
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR----------ESILGSDQMERGVAEELRRRFRPEF 171
+G+ VD KNT+IIMT+N+G I++ ++ G ++M+ V EELR+ FRPEF
Sbjct: 655 QGRVVDFKNTVIIMTTNLGTRDISKGVMTGFQSATDTTTGYERMKGKVKEELRQHFRPEF 714
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNR+D+VIVF QL K +++EIVD+ + + +RL ++M + +T + K+ L + GY+P+ G
Sbjct: 715 LNRVDDVIVFPQLQKHEIVEIVDLFISRLGKRLAEQDMSIELTQSAKELLADRGYDPAMG 774
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGN 271
ARPLRR I +++ED L+E IL G I G +T+D G
Sbjct: 775 ARPLRRTIQQMVEDQLSEKILFGEIPAGSHITVDATGEGE 814
>gi|325282967|ref|YP_004255508.1| ATP-dependent chaperone ClpB [Deinococcus proteolyticus MRP]
gi|324314776|gb|ADY25891.1| ATP-dependent chaperone ClpB [Deinococcus proteolyticus MRP]
Length = 852
Score = 310 bits (793), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 153/257 (59%), Positives = 189/257 (73%), Gaps = 2/257 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
T+ RAR G+ DPNRP+ SF+F GPTGVGKTELA ALA F S +AMVRIDMSEYMEKHT
Sbjct: 573 TIRRARAGLNDPNRPLGSFMFLGPTGVGKTELAKALAEFLFDSSDAMVRIDMSEYMEKHT 632
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG+E GGQLTEAVR RP+SVIL DEIEKAH DV NV+LQ+LDDGR+TDG
Sbjct: 633 VARLIGAPPGYVGYEEGGQLTEAVRRRPYSVILLDEIEKAHPDVFNVLLQVLDDGRLTDG 692
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS--DQMERGVAEELRRRFRPEFLNRIDEVI 179
+G+TVD +NT+II+TSNIG +I G D + V EELR FRPEFLNR+D++I
Sbjct: 693 QGRTVDFRNTLIILTSNIGSPLILEMQAQGQQPDDIRNAVLEELRGHFRPEFLNRVDDII 752
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF L L +IVDI L + +RL + + L +T K +L GY+P++GARPL+RAI
Sbjct: 753 VFDALTAENLRQIVDIQLGGLRKRLAERRVTLNLTDAAKDRLAAVGYDPAFGARPLKRAI 812
Query: 240 GRLLEDNLAEIILTGYI 256
R +E LA IL G +
Sbjct: 813 SREIETPLARRILAGDV 829
>gi|422719707|ref|ZP_16776335.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0017]
gi|315032999|gb|EFT44931.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0017]
Length = 831
Score = 310 bits (793), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 143/277 (51%), Positives = 202/277 (72%), Gaps = 9/277 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FGS+EA++R+DMSE+MEK++
Sbjct: 533 AIRRARSGLKDPARPIGSFMFLGPTGVGKTELAKALAEAMFGSEEALIRVDMSEFMEKYS 592
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG+E GGQLTE +R RP+SVIL DE+EKAH DV N++LQ+LDDG +TD
Sbjct: 593 TSRLIGSPPGYVGYEEGGQLTEKIRQRPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDA 652
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+ VD +NTI+IMTSN+G + I E +G + M++ + EEL++ FRPEFL
Sbjct: 653 KGRKVDFRNTILIMTSNLGATAIREEKHVGFNVKDISKNHELMQKRIMEELKKAFRPEFL 712
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE +VF L + ++ EIV IM + + +R+ + +++ +T + + + G++P YGA
Sbjct: 713 NRIDETVVFHSLKQEEIHEIVKIMSQSVVKRMAEQGVKVKITPAAIEVIGKVGFDPEYGA 772
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
RP+RRA+ + +ED L+E +L+G IQ+GD VT+ G
Sbjct: 773 RPIRRALQKEVEDRLSEALLSGQIQLGDKVTLGASKG 809
>gi|308175906|ref|YP_003915312.1| ATP-dependent Clp protease ATP-binding subunit [Arthrobacter
arilaitensis Re117]
gi|307743369|emb|CBT74341.1| ATP-dependent Clp protease ATP-binding subunit [Arthrobacter
arilaitensis Re117]
Length = 840
Score = 310 bits (793), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 147/284 (51%), Positives = 203/284 (71%), Gaps = 10/284 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R R G++DPNRP SF+F GPTGVGKTELA ALA FG +EA++ +DMSEY EKHT
Sbjct: 535 AIRRTRAGLKDPNRPGGSFIFAGPTGVGKTELAKALAEFLFGEEEALITLDMSEYSEKHT 594
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ FG+PPGYVG+E GGQLTE VR RP SV+LFDE+EKAH D+ N +LQ+L+DGR+TD
Sbjct: 595 VSRLFGAPPGYVGYEEGGQLTEKVRRRPFSVVLFDEVEKAHADLFNSLLQILEDGRLTDS 654
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR----------ESILGSDQMERGVAEELRRRFRPEF 171
+G+ VD KNTIIIMT+N+G I++ ++ G ++M+ V EELR+ FRPEF
Sbjct: 655 QGRVVDFKNTIIIMTTNLGTRDISKGVMTGFQSAADTKTGYERMQAKVQEELRQHFRPEF 714
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNR+D+ +VF QLN+ ++ EIVD+ + + +RL+ ++M + +T + L + GY+P+ G
Sbjct: 715 LNRVDDTVVFPQLNQDEIEEIVDLFVARLAKRLKDRDMTIELTQAARSLLAQRGYDPAMG 774
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMY 275
ARPLRR I R +ED L+E IL G I G +T+D + G + +
Sbjct: 775 ARPLRRTIQRDIEDQLSERILFGQIVAGQKITVDVEGEGELQKF 818
>gi|295106036|emb|CBL03579.1| ATPases with chaperone activity, ATP-binding subunit [Gordonibacter
pamelaeae 7-10-1-b]
Length = 854
Score = 310 bits (793), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 151/278 (54%), Positives = 205/278 (73%), Gaps = 10/278 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G++DP RP SF+F GP+GVGKTEL+ ALA F S++A++ DMSEYMEKH+
Sbjct: 527 AIRRSRSGLKDPKRPAGSFIFLGPSGVGKTELSKALAEFLFNSEDALLSFDMSEYMEKHS 586
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ GSPPGYVGF+ GGQLT+AVR RP+SV+LFDEIEKAH DV N++LQ+L++GR+TD
Sbjct: 587 VSRLVGSPPGYVGFDEGGQLTKAVRQRPYSVVLFDEIEKAHPDVFNILLQILEEGRLTDA 646
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SD-QMERGVAEELRRRFRPEF 171
+G+TVD +NT+IIMTSN+G IA+ + LG SD +++ V E+++ FRPEF
Sbjct: 647 QGRTVDFRNTVIIMTSNVGAREIAQPTTLGFSTEEHAGLSDKEIKSRVMSEMKKLFRPEF 706
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNRIDE+IVF+ LN Q+ EIV +M+ ++ ERL A+NM + +T T K + +EG + ++G
Sbjct: 707 LNRIDEIIVFKSLNDEQIAEIVKLMVADLRERLIAQNMSINLTDTACKLIAKEGTDATFG 766
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
ARPLRRAI RLLED L+E IL G G + +D G
Sbjct: 767 ARPLRRAIQRLLEDPLSEEILEGKWSTGSIIDVDAVDG 804
>gi|257417375|ref|ZP_05594369.1| UvrB/UvrC protein [Enterococcus faecalis ARO1/DG]
gi|257159203|gb|EEU89163.1| UvrB/UvrC protein [Enterococcus faecalis ARO1/DG]
Length = 831
Score = 310 bits (793), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 143/277 (51%), Positives = 202/277 (72%), Gaps = 9/277 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FGS+EA++R+DMSE+MEK++
Sbjct: 533 AIRRARSGLKDPARPIGSFMFLGPTGVGKTELAKALAEAMFGSEEALIRVDMSEFMEKYS 592
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG+E GGQLTE +R RP+SVIL DE+EKAH DV N++LQ+LDDG +TD
Sbjct: 593 TSRLIGSPPGYVGYEEGGQLTEKIRQRPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDA 652
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+ VD +NTI+IMTSN+G + I E +G + M++ + EEL++ FRPEFL
Sbjct: 653 KGRKVDFRNTILIMTSNLGATAIREEKHVGFNVKDISKNHELMQKRIMEELKKAFRPEFL 712
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE +VF L + ++ EIV IM + + +R+ + +++ +T + + + G++P YGA
Sbjct: 713 NRIDETVVFHSLKQEEIHEIVKIMSQSVVKRMAEQEVKVKITPAAIEVIGKVGFDPEYGA 772
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
RP+RRA+ + +ED L+E +L+G IQ+GD VT+ G
Sbjct: 773 RPIRRALQKEVEDRLSEALLSGQIQLGDKVTLGASKG 809
>gi|422728728|ref|ZP_16785136.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0012]
gi|315150882|gb|EFT94898.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0012]
Length = 831
Score = 310 bits (793), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 143/277 (51%), Positives = 202/277 (72%), Gaps = 9/277 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FGS+EA++R+DMSE+MEK++
Sbjct: 533 AIRRARSGLKDPARPIGSFMFLGPTGVGKTELAKALAEAMFGSEEALIRVDMSEFMEKYS 592
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG+E GGQLTE +R RP+SVIL DE+EKAH DV N++LQ+LDDG +TD
Sbjct: 593 TSRLIGSPPGYVGYEEGGQLTEKIRQRPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDA 652
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+ VD +NTI+IMTSN+G + I E +G + M++ + EEL++ FRPEFL
Sbjct: 653 KGRKVDFRNTILIMTSNLGATAIREEKHVGFNVKDISKNHELMQKRIMEELKKAFRPEFL 712
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE +VF L + ++ EIV IM + + +R+ + +++ +T + + + G++P YGA
Sbjct: 713 NRIDETVVFHSLKQEEIHEIVKIMSQSVVKRMAEQEVKVKITPAAIEVIGKVGFDPEYGA 772
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
RP+RRA+ + +ED L+E +L+G IQ+GD VT+ G
Sbjct: 773 RPIRRALQKEVEDRLSEALLSGQIQLGDKVTLGASKG 809
>gi|170078948|ref|YP_001735586.1| endopeptidase Clp ATP-binding subunit B1 [Synechococcus sp. PCC
7002]
gi|169886617|gb|ACB00331.1| endopeptidase Clp ATP-binding chain B1 [Synechococcus sp. PCC 7002]
Length = 864
Score = 310 bits (793), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 152/269 (56%), Positives = 193/269 (71%), Gaps = 6/269 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRP +SF+F GPTGVGKTELA ALA F ++EA+VRIDMSEYMEKH
Sbjct: 589 AIQRSRAGLADPNRPTASFIFLGPTGVGKTELAKALAQFLFDTEEALVRIDMSEYMEKHA 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEA+R RP+SVILFDEIEKAH DV NVMLQ+LDDGR+TD
Sbjct: 649 VSRLMGAPPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHADVFNVMLQILDDGRLTDS 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD----QMERGVAEELRRRFRPEFLNRIDE 177
+G+TVD KNT+IIMTSNIG I I G D +M V E + FRPEFLNRIDE
Sbjct: 709 QGRTVDFKNTVIIMTSNIGSQFIL--DIAGDDARYEEMRNRVMEAMNANFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+F L K QL IV + + + ERL + + + +T + E GYNP YGARPL+R
Sbjct: 767 LIIFHGLQKDQLRSIVQLQVNRLAERLAEQKISIQLTPEAYDFIAEVGYNPVYGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
A+ + +E +A+ IL G + G ++T+D
Sbjct: 827 AVQKYVETAIAKGILKGEFKAGSAITVDV 855
>gi|257083072|ref|ZP_05577433.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis Fly1]
gi|256991102|gb|EEU78404.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis Fly1]
Length = 831
Score = 310 bits (793), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 143/277 (51%), Positives = 202/277 (72%), Gaps = 9/277 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FGS+EA++R+DMSE+MEK++
Sbjct: 533 AIRRARSGLKDPARPIGSFMFLGPTGVGKTELAKALAEAMFGSEEALIRVDMSEFMEKYS 592
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG+E GGQLTE +R RP+SVIL DE+EKAH DV N++LQ+LDDG +TD
Sbjct: 593 TSRLIGSPPGYVGYEEGGQLTEKIRQRPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDA 652
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+ VD +NTI+IMTSN+G + I E +G + M++ + EEL++ FRPEFL
Sbjct: 653 KGRKVDFRNTILIMTSNLGATAIREEKHVGFNVKDISKNHELMQKRIMEELKKAFRPEFL 712
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE +VF L + ++ EIV IM + + +R+ + +++ +T + + + G++P YGA
Sbjct: 713 NRIDETVVFHSLKQEEIHEIVKIMSQSVVKRMAEQEVKVKITPAAIEVIGKVGFDPEYGA 772
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
RP+RRA+ + +ED L+E +L+G IQ+GD VT+ G
Sbjct: 773 RPIRRALQKEVEDRLSEALLSGQIQLGDKVTLGASKG 809
>gi|384517059|ref|YP_005704364.1| clpC ATPase [Enterococcus faecalis 62]
gi|323479192|gb|ADX78631.1| clpC ATPase [Enterococcus faecalis 62]
Length = 831
Score = 310 bits (793), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 143/277 (51%), Positives = 202/277 (72%), Gaps = 9/277 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FGS+EA++R+DMSE+MEK++
Sbjct: 533 AIRRARSGLKDPARPIGSFMFLGPTGVGKTELAKALAEAMFGSEEALIRVDMSEFMEKYS 592
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG+E GGQLTE +R RP+SVIL DE+EKAH DV N++LQ+LDDG +TD
Sbjct: 593 TSRLIGSPPGYVGYEEGGQLTEKIRQRPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDA 652
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+ VD +NTI+IMTSN+G + I E +G + M++ + EEL++ FRPEFL
Sbjct: 653 KGRKVDFRNTILIMTSNLGATAIREEKHVGFNVKDISKNHELMQKRIMEELKKAFRPEFL 712
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE +VF L + ++ EIV IM + + +R+ + +++ +T + + + G++P YGA
Sbjct: 713 NRIDETVVFHSLKQEEIHEIVKIMSQSVVKRMAEQEVKVKITPAAIEVIGKVGFDPEYGA 772
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
RP+RRA+ + +ED L+E +L+G IQ+GD VT+ G
Sbjct: 773 RPIRRALQKEVEDRLSEALLSGQIQLGDKVTLGASKG 809
>gi|113953637|ref|YP_731101.1| ATP-dependent Clp protease Hsp 100, ATP-binding subunit ClpB
[Synechococcus sp. CC9311]
gi|113880988|gb|ABI45946.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
[Synechococcus sp. CC9311]
Length = 863
Score = 310 bits (793), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 151/268 (56%), Positives = 196/268 (73%), Gaps = 8/268 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPN+PI+SFLF GPTGVGKTEL+ ALA + F S++A+VRIDMSEYMEKHT
Sbjct: 589 AIQRSRAGLSDPNQPIASFLFLGPTGVGKTELSKALAAQLFDSEDALVRIDMSEYMEKHT 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEAVR RP++VILFDE+EKAH DV NVMLQ+LDDGRVTDG
Sbjct: 649 VSRLIGAPPGYVGYEAGGQLTEAVRRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDG 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD-----QMERGVAEELRRRFRPEFLNRID 176
+G+TVD N ++I+TSNIG I LG D +ME V E LR FRPEFLNRID
Sbjct: 709 QGRTVDFTNAVLILTSNIGSQSILD---LGGDDSQHQEMESRVNEALRNHFRPEFLNRID 765
Query: 177 EVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLR 236
+ I+F L + +L IV + ++ + +RL + ++L ++ L GY+P YGARPL+
Sbjct: 766 DTIIFHSLRRDELRLIVALQVERLRKRLSERKLDLHISEEATDWLANAGYDPVYGARPLK 825
Query: 237 RAIGRLLEDNLAEIILTGYIQVGDSVTM 264
RAI R LE +A+ IL+G + G SV +
Sbjct: 826 RAIQRELETPIAKAILSGAYEEGSSVQI 853
>gi|256854930|ref|ZP_05560294.1| ATP-dependent Clp protease [Enterococcus faecalis T8]
gi|307290756|ref|ZP_07570654.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0411]
gi|422684442|ref|ZP_16742680.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX4000]
gi|256710490|gb|EEU25534.1| ATP-dependent Clp protease [Enterococcus faecalis T8]
gi|306498176|gb|EFM67695.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0411]
gi|315030822|gb|EFT42754.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX4000]
Length = 831
Score = 310 bits (793), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 143/277 (51%), Positives = 202/277 (72%), Gaps = 9/277 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FGS+EA++R+DMSE+MEK++
Sbjct: 533 AIRRARSGLKDPARPIGSFMFLGPTGVGKTELAKALAEAMFGSEEALIRVDMSEFMEKYS 592
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG+E GGQLTE +R RP+SVIL DE+EKAH DV N++LQ+LDDG +TD
Sbjct: 593 TSRLIGSPPGYVGYEEGGQLTEKIRQRPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDA 652
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+ VD +NTI+IMTSN+G + I E +G + M++ + EEL++ FRPEFL
Sbjct: 653 KGRKVDFRNTILIMTSNLGATAIREEKHVGFNVKDISKNHELMQKRIMEELKKAFRPEFL 712
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE +VF L + ++ EIV IM + + +R+ + +++ +T + + + G++P YGA
Sbjct: 713 NRIDETVVFHSLKQEEIHEIVKIMSQSVVKRMAEQEVKVKITPAAIEVIGKVGFDPEYGA 772
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
RP+RRA+ + +ED L+E +L+G IQ+GD VT+ G
Sbjct: 773 RPIRRALQKEVEDRLSEALLSGQIQLGDKVTLGASKG 809
>gi|424760005|ref|ZP_18187660.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis R508]
gi|402404076|gb|EJV36710.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis R508]
Length = 831
Score = 310 bits (793), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 143/277 (51%), Positives = 202/277 (72%), Gaps = 9/277 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FGS+EA++R+DMSE+MEK++
Sbjct: 533 AIRRARSGLKDPARPIGSFMFLGPTGVGKTELAKALAEAMFGSEEALIRVDMSEFMEKYS 592
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG+E GGQLTE +R RP+SVIL DE+EKAH DV N++LQ+LDDG +TD
Sbjct: 593 TSRLIGSPPGYVGYEEGGQLTEKIRQRPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDA 652
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+ VD +NTI+IMTSN+G + I E +G + M++ + EEL++ FRPEFL
Sbjct: 653 KGRKVDFRNTILIMTSNLGATAIREEKHVGFNVKDISKNHELMQKRIMEELKKAFRPEFL 712
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE +VF L + ++ EIV IM + + +R+ + +++ +T + + + G++P YGA
Sbjct: 713 NRIDETVVFHSLKQEEIHEIVKIMSQSVVKRMAEQEVKVKITPAAIEVIGKVGFDPEYGA 772
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
RP+RRA+ + +ED L+E +L+G IQ+GD VT+ G
Sbjct: 773 RPIRRALQKEVEDRLSEALLSGQIQLGDKVTLGASKG 809
>gi|256960597|ref|ZP_05564768.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis Merz96]
gi|293384400|ref|ZP_06630281.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis R712]
gi|293389786|ref|ZP_06634227.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis S613]
gi|312906551|ref|ZP_07765552.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis DAPTO 512]
gi|312910758|ref|ZP_07769596.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis DAPTO 516]
gi|256951093|gb|EEU67725.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis Merz96]
gi|291078248|gb|EFE15612.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis R712]
gi|291080912|gb|EFE17875.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis S613]
gi|310627420|gb|EFQ10703.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis DAPTO 512]
gi|311288957|gb|EFQ67513.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis DAPTO 516]
Length = 831
Score = 310 bits (793), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 143/277 (51%), Positives = 202/277 (72%), Gaps = 9/277 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FGS+EA++R+DMSE+MEK++
Sbjct: 533 AIRRARSGLKDPARPIGSFMFLGPTGVGKTELAKALAEAMFGSEEALIRVDMSEFMEKYS 592
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG+E GGQLTE +R RP+SVIL DE+EKAH DV N++LQ+LDDG +TD
Sbjct: 593 TSRLIGSPPGYVGYEEGGQLTEKIRQRPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDA 652
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+ VD +NTI+IMTSN+G + I E +G + M++ + EEL++ FRPEFL
Sbjct: 653 KGRKVDFRNTILIMTSNLGATAIREEKHVGFNVKDISKNHELMQKRIMEELKKAFRPEFL 712
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE +VF L + ++ EIV IM + + +R+ + +++ +T + + + G++P YGA
Sbjct: 713 NRIDETVVFHSLKQEEIHEIVKIMSQSVVKRMAEQEVKVKITPAAIEVIGKVGFDPEYGA 772
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
RP+RRA+ + +ED L+E +L+G IQ+GD VT+ G
Sbjct: 773 RPIRRALQKEVEDRLSEALLSGQIQLGDKVTLGASKG 809
>gi|126653478|ref|ZP_01725571.1| ATP-dependent Clp protease ATPase subunit [Bacillus sp. B14905]
gi|126589756|gb|EAZ83890.1| ATP-dependent Clp protease ATPase subunit [Bacillus sp. B14905]
Length = 814
Score = 310 bits (793), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 145/273 (53%), Positives = 200/273 (73%), Gaps = 9/273 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+R+DMSEYMEKH+
Sbjct: 524 AIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEVMFGDEDAMIRVDMSEYMEKHS 583
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVGF++GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 584 TSRLVGSPPGYVGFDDGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDS 643
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+ VD +NT++IMTSN+G + + LG + M+ + EEL++ FRPEFL
Sbjct: 644 KGRVVDFRNTVVIMTSNVGADALKYQKSLGFNVGGADSKHNDMKSTMLEELKKAFRPEFL 703
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE+IVF L K L EI+ +M + +RL+ +++ L +T +K+ +EGY+P YGA
Sbjct: 704 NRIDEMIVFHSLEKEHLKEIIAMMGNALTKRLKEQDISLELTDAALEKIAQEGYDPQYGA 763
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMD 265
RPLRRA+ + +ED L+E +L G ++ G+ V +D
Sbjct: 764 RPLRRALQKQVEDRLSEELLKGNVEKGNHVVID 796
>gi|255974129|ref|ZP_05424715.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis T2]
gi|307283899|ref|ZP_07564072.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0860]
gi|422736196|ref|ZP_16792461.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX1341]
gi|255967001|gb|EET97623.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis T2]
gi|306503549|gb|EFM72796.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0860]
gi|315167028|gb|EFU11045.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX1341]
Length = 831
Score = 310 bits (793), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 143/277 (51%), Positives = 202/277 (72%), Gaps = 9/277 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FGS+EA++R+DMSE+MEK++
Sbjct: 533 AIRRARSGLKDPARPIGSFMFLGPTGVGKTELAKALAEAMFGSEEALIRVDMSEFMEKYS 592
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG+E GGQLTE +R RP+SVIL DE+EKAH DV N++LQ+LDDG +TD
Sbjct: 593 TSRLIGSPPGYVGYEEGGQLTEKIRQRPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDA 652
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+ VD +NTI+IMTSN+G + I E +G + M++ + EEL++ FRPEFL
Sbjct: 653 KGRKVDFRNTILIMTSNLGATAIREEKHVGFNVKDISKNHELMQKRIMEELKKAFRPEFL 712
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE +VF L + ++ EIV IM + + +R+ + +++ +T + + + G++P YGA
Sbjct: 713 NRIDETVVFHSLKQEEIHEIVKIMSQSVVKRMAEQEVKVKITPAAIEVIGKVGFDPEYGA 772
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
RP+RRA+ + +ED L+E +L+G IQ+GD VT+ G
Sbjct: 773 RPIRRALQKEVEDRLSEALLSGQIQLGDKVTLGASKG 809
>gi|254413004|ref|ZP_05026776.1| ATPase, AAA family [Coleofasciculus chthonoplastes PCC 7420]
gi|196180168|gb|EDX75160.1| ATPase, AAA family [Coleofasciculus chthonoplastes PCC 7420]
Length = 875
Score = 310 bits (793), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 151/271 (55%), Positives = 194/271 (71%), Gaps = 6/271 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRP +SF+F GPTGVGKTELA ALA F +++A+VRIDMSEYMEKH
Sbjct: 589 AIQRSRAGLADPNRPTASFIFLGPTGVGKTELAKALAAYLFDTEDALVRIDMSEYMEKHA 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGY+G+E GGQLTE++R RP++VILFDEIEKAH DV N+MLQ+LDDGRVTD
Sbjct: 649 VSRLIGAPPGYIGYEEGGQLTESIRRRPYAVILFDEIEKAHNDVFNIMLQILDDGRVTDA 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS----DQMERGVAEELRRRFRPEFLNRIDE 177
+G TVD KNT+IIMTSNIG I + G D+M V E +R FRPEFLNRIDE
Sbjct: 709 QGHTVDFKNTVIIMTSNIGSQYIL--DLAGDDTHYDEMRGRVMEAMRTSFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
VI+F L K QL IV + + + +RL + M L ++ L E GY+P +GARPL+R
Sbjct: 767 VIIFHALQKHQLRHIVSLQTQLLEKRLAERQMALKLSEAAIDYLAEVGYDPVFGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDS 268
AI R LE LA+ +L G GD++ +D ++
Sbjct: 827 AIQRELETQLAKAMLRGEFSDGDTIFVDVEN 857
>gi|229547309|ref|ZP_04436034.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis TX1322]
gi|229307548|gb|EEN73535.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis TX1322]
Length = 831
Score = 310 bits (793), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 143/277 (51%), Positives = 202/277 (72%), Gaps = 9/277 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FGS+EA++R+DMSE+MEK++
Sbjct: 533 AIRRARSGLKDPARPIGSFMFLGPTGVGKTELAKALAEAMFGSEEALIRVDMSEFMEKYS 592
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG+E GGQLTE +R RP+SVIL DE+EKAH DV N++LQ+LDDG +TD
Sbjct: 593 TSRLIGSPPGYVGYEEGGQLTEKIRQRPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDA 652
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+ VD +NTI+IMTSN+G + I E +G + M++ + EEL++ FRPEFL
Sbjct: 653 KGRKVDFRNTILIMTSNLGATAIREEKHVGFNVKDISKNHELMQKRIMEELKKAFRPEFL 712
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE +VF L + ++ EIV IM + + +R+ + +++ +T + + + G++P YGA
Sbjct: 713 NRIDETVVFHSLKQEEIHEIVKIMSQSVVKRMAEQEVKVKITPAAIEVIGKVGFDPEYGA 772
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
RP+RRA+ + +ED L+E +L+G IQ+GD VT+ G
Sbjct: 773 RPIRRALQKEVEDRLSEALLSGQIQLGDKVTLGASKG 809
>gi|256760910|ref|ZP_05501490.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis T3]
gi|307288063|ref|ZP_07568079.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0109]
gi|422704997|ref|ZP_16762805.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX1302]
gi|256682161|gb|EEU21856.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis T3]
gi|306500941|gb|EFM70256.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0109]
gi|315163552|gb|EFU07569.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX1302]
Length = 831
Score = 309 bits (792), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 143/277 (51%), Positives = 202/277 (72%), Gaps = 9/277 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FGS+EA++R+DMSE+MEK++
Sbjct: 533 AIRRARSGLKDPARPIGSFMFLGPTGVGKTELAKALAEAMFGSEEALIRVDMSEFMEKYS 592
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG+E GGQLTE +R RP+SVIL DE+EKAH DV N++LQ+LDDG +TD
Sbjct: 593 TSRLIGSPPGYVGYEEGGQLTEKIRQRPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDA 652
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+ VD +NTI+IMTSN+G + I E +G + M++ + EEL++ FRPEFL
Sbjct: 653 KGRKVDFRNTILIMTSNLGATAIREEKHVGFNVKDISKNHELMQKRIMEELKKAFRPEFL 712
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE +VF L + ++ EIV IM + + +R+ + +++ +T + + + G++P YGA
Sbjct: 713 NRIDETVVFHSLKQEEIHEIVKIMSQSVVKRMAEQEVKVKITPAAIEVIGKVGFDPEYGA 772
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
RP+RRA+ + +ED L+E +L+G IQ+GD VT+ G
Sbjct: 773 RPIRRALQKEVEDRLSEALLSGQIQLGDKVTLGASKG 809
>gi|187934389|ref|YP_001884443.1| negative regulator of genetic competence ClpC/mecB [Clostridium
botulinum B str. Eklund 17B]
gi|187722542|gb|ACD23763.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum B str. Eklund 17B]
Length = 814
Score = 309 bits (792), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 150/282 (53%), Positives = 209/282 (74%), Gaps = 11/282 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RARVGI+DPNRPI +F+F GPTGVGKTEL+ ALA FG + +++RIDMSEYME ++VSK
Sbjct: 532 RARVGIKDPNRPIGTFIFLGPTGVGKTELSKALAETMFGDENSIIRIDMSEYMESNSVSK 591
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPGYVG+++GGQLTEAVR +P+SV+L DEIEKAH+DV N++LQ+++DGR+TD G+
Sbjct: 592 LIGSPPGYVGYDDGGQLTEAVRRKPYSVVLLDEIEKAHQDVFNILLQIMEDGRLTDSHGK 651
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEFLNR 174
V+ KNTI+IMTSN+G I ++ +G ++M+ V EEL+R F+PEFLNR
Sbjct: 652 VVNFKNTIVIMTSNVGAHQIKKQKTIGFNTSIDENSEYEKMKDNVLEELKRSFKPEFLNR 711
Query: 175 IDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARP 234
ID+ IVF +L + L++IVD+MLK I +RLE K++ L KK LI + + +YGARP
Sbjct: 712 IDDTIVFHKLKEDDLLDIVDLMLKSITKRLENKDIHLNFEKDSKKFLINKRIDLNYGARP 771
Query: 235 LRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYR 276
LRR I + +ED L+E IL G I++GD + ++ +S N++ +
Sbjct: 772 LRRIITKEVEDKLSEEILLGNIKIGDRIKVN-ESKDNLVFTK 812
>gi|428318743|ref|YP_007116625.1| ATP-dependent chaperone ClpB [Oscillatoria nigro-viridis PCC 7112]
gi|428242423|gb|AFZ08209.1| ATP-dependent chaperone ClpB [Oscillatoria nigro-viridis PCC 7112]
Length = 871
Score = 309 bits (792), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 151/268 (56%), Positives = 199/268 (74%), Gaps = 3/268 (1%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRP++SF+F GPTGVGKTELA ALA F ++EA+VRIDMSEYMEKH
Sbjct: 590 AIQRSRAGLADPNRPVASFIFLGPTGVGKTELAKALAAYLFDTEEAIVRIDMSEYMEKHA 649
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTEAVR RP+SVILFDEIEKAH DV N+MLQ+LDDGRVTD
Sbjct: 650 VSRLIGAPPGYVGYDEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNIMLQILDDGRVTDA 709
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMERG-VAEELRRRFRPEFLNRIDEVIV 180
+G TVD KN++IIMTSN+G I + G +++ R V E +R FRPEFLNRIDE+I+
Sbjct: 710 QGHTVDFKNSVIIMTSNVGSQYIL--DVAGDNELMRSRVMEAMRGTFRPEFLNRIDEMII 767
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L+K +L +IV + +K + +RL + M L ++ + L E GY+P YGARPL+R I
Sbjct: 768 FHGLSKTELRQIVLLQVKRLEKRLADRKMSLKLSESAIDFLAEIGYDPVYGARPLKRGIQ 827
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDS 268
R LE +A+ IL G GD++ +D ++
Sbjct: 828 RELETQMAKGILRGDFADGDTIFVDIEN 855
>gi|419761278|ref|ZP_14287534.1| chaperone ClpB [Thermosipho africanus H17ap60334]
gi|407513584|gb|EKF48481.1| chaperone ClpB [Thermosipho africanus H17ap60334]
Length = 788
Score = 309 bits (792), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 146/274 (53%), Positives = 203/274 (74%), Gaps = 2/274 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ +AR GI+DPNRPI +FLF GP+GVGKTELA +A FGS+ A++RIDMSEYMEKH+
Sbjct: 507 AIRKARAGIKDPNRPIGTFLFLGPSGVGKTELAKTIAELLFGSENALIRIDMSEYMEKHS 566
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG++ GGQLT+AVR +P+SVIL DE+EKAH +V NV+LQ+ DDGR+TDG
Sbjct: 567 VARLIGAPPGYVGYDQGGQLTDAVRRKPYSVILLDEVEKAHPEVFNVLLQVFDDGRLTDG 626
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD--QMERGVAEELRRRFRPEFLNRIDEVI 179
KG TVD +NTIIIMTSN+ I R+ G D ++E V E+L+ FRPEF+NRID V+
Sbjct: 627 KGNTVDFRNTIIIMTSNLASDKILRKVEAGVDFEKIEESVREDLKHYFRPEFINRIDHVV 686
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
+F+ L K + EIV+ ++ + RL+ KN+++ +T K+ L E+GY+P++GARPLRR I
Sbjct: 687 IFKPLTKEHMKEIVEKLVARLENRLKEKNLKIKLTEKAKEYLAEKGYDPAFGARPLRRLI 746
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
R +E L+ I+ G I GD V +D ++G ++
Sbjct: 747 EREIETPLSVKIIAGEIAEGDIVLVDEENGKLIV 780
>gi|186683260|ref|YP_001866456.1| ATPase [Nostoc punctiforme PCC 73102]
gi|186465712|gb|ACC81513.1| ATPase AAA-2 domain protein [Nostoc punctiforme PCC 73102]
Length = 880
Score = 309 bits (792), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 151/270 (55%), Positives = 196/270 (72%), Gaps = 6/270 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRPI+SF+F GPTGVGKTELA ALA F +++A+VRIDMSEYMEKH
Sbjct: 597 AIQRSRAGLADPNRPIASFIFLGPTGVGKTELAKALAEYLFDTEDALVRIDMSEYMEKHA 656
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG+E GGQLTEA+R RP+SVILFDEIEKAH DV NV+LQ+LDDGR+TD
Sbjct: 657 VARLIGAPPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHPDVFNVLLQILDDGRLTDS 716
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD----QMERGVAEELRRRFRPEFLNRIDE 177
+G+TVD KNTI IMTSNIG I + G D QM V E +R FRPEFLNRIDE
Sbjct: 717 QGRTVDFKNTIAIMTSNIGSIYIL--DVAGDDSKYEQMRDRVMEAVRESFRPEFLNRIDE 774
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+F L K +L EIV + ++ + ERL + + L ++ +++ GY+P YGARPL+R
Sbjct: 775 IIIFHSLRKDELREIVKLQVQRLEERLRERKLSLKISDQALDWIVQVGYDPVYGARPLKR 834
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
AI R LE +A+ IL G GD++ + +
Sbjct: 835 AIQRELETPIAKAILRGEFHEGDTIYVHVE 864
>gi|443635019|ref|ZP_21119190.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus subtilis subsp. inaquosorum KCTC 13429]
gi|443345210|gb|ELS59276.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus subtilis subsp. inaquosorum KCTC 13429]
Length = 810
Score = 309 bits (792), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 149/274 (54%), Positives = 196/274 (71%), Gaps = 9/274 (3%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTGVGKTELA ALA FG +EAM+RIDMSEYMEKH+ S+ GS
Sbjct: 530 GLKDPKRPIGSFIFLGPTGVGKTELARALAESIFGDEEAMIRIDMSEYMEKHSTSRLVGS 589
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG++ GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+L+DGR+TD KG+TVD
Sbjct: 590 PPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDF 649
Query: 129 KNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFLNRIDEVI 179
+NTI+IMTSN+G S + R +G M+ V EL+R FRPEF+NRIDE+I
Sbjct: 650 RNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEII 709
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF L K L EIV +M ++ +RL+ +++ + +T K K+ EEG + YGARPLRRAI
Sbjct: 710 VFHSLEKKHLTEIVSLMSDQLTKRLKEQDLSIELTEAAKAKVAEEGVDLEYGARPLRRAI 769
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
+ +ED L+E +L G I G + +D + G V+
Sbjct: 770 QKHVEDRLSEELLRGNIHKGQHIVLDVEDGEFVV 803
>gi|229547888|ref|ZP_04436613.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis ATCC 29200]
gi|229306909|gb|EEN72905.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis ATCC 29200]
Length = 831
Score = 309 bits (792), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 143/277 (51%), Positives = 202/277 (72%), Gaps = 9/277 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FGS+EA++R+DMSE+MEK++
Sbjct: 533 AIRRARSGLKDPARPIGSFMFLGPTGVGKTELAKALAEAMFGSEEALIRVDMSEFMEKYS 592
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG+E GGQLTE +R RP+SVIL DE+EKAH DV N++LQ+LDDG +TD
Sbjct: 593 TSRLIGSPPGYVGYEEGGQLTEKIRQRPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDA 652
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+ VD +NTI+IMTSN+G + I E +G + M++ + EEL++ FRPEFL
Sbjct: 653 KGRKVDFRNTILIMTSNLGATAIREEKHVGFNVKDISKNHELMQKRIMEELKKAFRPEFL 712
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE +VF L + ++ EIV IM + + +R+ + +++ +T + + + G++P YGA
Sbjct: 713 NRIDETVVFHSLKQEEIHEIVKIMSQSVVKRMAEQEVKVKITPAAIEVIGKVGFDPEYGA 772
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
RP+RRA+ + +ED L+E +L+G IQ+GD VT+ G
Sbjct: 773 RPIRRALQKEVEDRLSEALLSGQIQLGDKVTLGASKG 809
>gi|125582344|gb|EAZ23275.1| hypothetical protein OsJ_06970 [Oryza sativa Japonica Group]
Length = 784
Score = 309 bits (792), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 150/284 (52%), Positives = 203/284 (71%), Gaps = 11/284 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+RVG+ DP+RPI++ LF GPTGVGKTEL ALA YFGS+ AM+R+DMSEYME+HT
Sbjct: 484 AVKRSRVGLNDPDRPIATLLFCGPTGVGKTELTKALAASYFGSESAMLRLDMSEYMERHT 543
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGY+G+ G LTEAVR +P +V+L DEIEKAH D+ N++LQ+ +DG ++D
Sbjct: 544 VSKLIGSPPGYIGYGETGTLTEAVRRKPFTVVLLDEIEKAHPDIFNILLQIFEDGHLSDS 603
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR---------ESILGSD--QMERGVAEELRRRFRPE 170
+G+ V KNT+I+MTSNIG + I++ E S M+ V EEL+ FRPE
Sbjct: 604 QGRRVSFKNTLIVMTSNIGSTSISKGRRSMGFMTEDTESSSYVAMKSLVMEELKAFFRPE 663
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
LNRIDE++VFR L K Q++ I+DI+L+E+ RL A + L V+ K + EEGY+ SY
Sbjct: 664 LLNRIDEMVVFRPLEKTQMLAILDIILQEVKGRLLALGIGLEVSDAMKDLICEEGYDKSY 723
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
GARPLRRA+ L+ED ++E IL G + GD++ MD D+GG + M
Sbjct: 724 GARPLRRAVTHLIEDVISEAILFGEYKPGDTILMDIDAGGKLCM 767
>gi|138893757|ref|YP_001124210.1| negative regulator of genetic competence ClpC/MecB [Geobacillus
thermodenitrificans NG80-2]
gi|196251133|ref|ZP_03149812.1| ATPase AAA-2 domain protein [Geobacillus sp. G11MC16]
gi|134265270|gb|ABO65465.1| Negative regulator of genetic competence ClpC/MecB [Geobacillus
thermodenitrificans NG80-2]
gi|196209374|gb|EDY04154.1| ATPase AAA-2 domain protein [Geobacillus sp. G11MC16]
Length = 811
Score = 309 bits (792), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 148/285 (51%), Positives = 202/285 (70%), Gaps = 9/285 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++A++RIDMSEYMEKH+
Sbjct: 524 AVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEAMFGDEDALIRIDMSEYMEKHS 583
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG+E GGQLTE VR +P+SV+L DE+EKAH DV N++LQ+L+DGR+TD
Sbjct: 584 TSRLIGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEMEKAHPDVFNILLQVLEDGRLTDS 643
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD---------QMERGVAEELRRRFRPEFL 172
KG+TVD +NTIIIMTSN+G + R +G + M+ V +EL++ FRPEFL
Sbjct: 644 KGRTVDFRNTIIIMTSNVGADALKRNKYVGFNIQDGNQQYKDMKGKVMDELKKAFRPEFL 703
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE+IVF L K L +IV +M + +RL+ ++++L +T +K+ EG++ YGA
Sbjct: 704 NRIDEIIVFHSLEKDHLKQIVRLMADTLVKRLKEQDIDLELTEAAIEKIAAEGFDLEYGA 763
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRH 277
RPLRRA+ + +ED L+E +L G I G V +D G V++ +
Sbjct: 764 RPLRRALQKHIEDRLSEELLKGTIAKGQKVAVDVKDGEFVVLSKQ 808
>gi|294101565|ref|YP_003553423.1| ATPase AAA-2 domain-containing protein [Aminobacterium colombiense
DSM 12261]
gi|293616545|gb|ADE56699.1| ATPase AAA-2 domain protein [Aminobacterium colombiense DSM 12261]
Length = 830
Score = 309 bits (792), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 143/273 (52%), Positives = 204/273 (74%), Gaps = 12/273 (4%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RP+ SFLF GPTGVGKTELA LA FGS++AM+R+DMSE+ME+H V K G+
Sbjct: 538 GMKDPRRPVGSFLFLGPTGVGKTELARRLADFLFGSEDAMIRLDMSEFMERHEVGKLIGA 597
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG++ GG+LTEA+R RP+SV+LFDEIEKAH DV N++LQ+L+DGR+TDG+G TVD
Sbjct: 598 PPGYVGYDEGGKLTEAIRRRPYSVVLFDEIEKAHEDVFNILLQILEDGRLTDGQGHTVDF 657
Query: 129 KNTIIIMTSNIGDSVIARESILG------------SDQMERGVAEELRRRFRPEFLNRID 176
+N +IIMTSNIG + + LG D+ + + + +++ FRPEF+NR+D
Sbjct: 658 RNAVIIMTSNIGAKDWVKGTSLGFSISGEADGYFDWDKTKSDILDAVQKTFRPEFINRVD 717
Query: 177 EVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLR 236
E++VFR L+K +++ IVDIML ++ ERL +++++ V+ K ++E+GYNP YGARPLR
Sbjct: 718 EMVVFRPLSKKEMLVIVDIMLSDVRERLRYQDIDIKVSEEAKAFILEKGYNPRYGARPLR 777
Query: 237 RAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
R I +L+ED +A+++L G I+ G V++D D G
Sbjct: 778 RKIQQLIEDRMADMLLEGKIKKGSLVSIDEDKG 810
>gi|115446435|ref|NP_001046997.1| Os02g0526400 [Oryza sativa Japonica Group]
gi|75123405|sp|Q6H795.1|CLPD1_ORYSJ RecName: Full=Chaperone protein ClpD1, chloroplastic; AltName:
Full=ATP-dependent Clp protease ATP-binding subunit ClpD
homolog 1; AltName: Full=Casein lytic proteinase D1;
Flags: Precursor
gi|49388289|dbj|BAD25404.1| ATP-dependent Clp protease ATP-binding subunit precursor [Oryza
sativa Japonica Group]
gi|113536528|dbj|BAF08911.1| Os02g0526400 [Oryza sativa Japonica Group]
Length = 938
Score = 309 bits (792), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 150/284 (52%), Positives = 203/284 (71%), Gaps = 11/284 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+RVG+ DP+RPI++ LF GPTGVGKTEL ALA YFGS+ AM+R+DMSEYME+HT
Sbjct: 638 AVKRSRVGLNDPDRPIATLLFCGPTGVGKTELTKALAASYFGSESAMLRLDMSEYMERHT 697
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGY+G+ G LTEAVR +P +V+L DEIEKAH D+ N++LQ+ +DG ++D
Sbjct: 698 VSKLIGSPPGYIGYGETGTLTEAVRRKPFTVVLLDEIEKAHPDIFNILLQIFEDGHLSDS 757
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR---------ESILGSD--QMERGVAEELRRRFRPE 170
+G+ V KNT+I+MTSNIG + I++ E S M+ V EEL+ FRPE
Sbjct: 758 QGRRVSFKNTLIVMTSNIGSTSISKGRRSMGFMTEDTESSSYVAMKSLVMEELKAFFRPE 817
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
LNRIDE++VFR L K Q++ I+DI+L+E+ RL A + L V+ K + EEGY+ SY
Sbjct: 818 LLNRIDEMVVFRPLEKTQMLAILDIILQEVKGRLLALGIGLEVSDAMKDLICEEGYDKSY 877
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
GARPLRRA+ L+ED ++E IL G + GD++ MD D+GG + M
Sbjct: 878 GARPLRRAVTHLIEDVISEAILFGEYKPGDTILMDIDAGGKLCM 921
>gi|398309188|ref|ZP_10512662.1| genetic competence negative regulator ClpC/MecB [Bacillus
mojavensis RO-H-1]
Length = 810
Score = 309 bits (792), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 149/274 (54%), Positives = 196/274 (71%), Gaps = 9/274 (3%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTGVGKTELA ALA FG +EAM+RIDMSEYMEKH+ S+ GS
Sbjct: 530 GLKDPKRPIGSFIFLGPTGVGKTELARALAESIFGDEEAMIRIDMSEYMEKHSTSRLVGS 589
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG++ GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+L+DGR+TD KG+TVD
Sbjct: 590 PPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDF 649
Query: 129 KNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFLNRIDEVI 179
+NTI+IMTSN+G S + R +G M+ V EL+R FRPEF+NRIDE+I
Sbjct: 650 RNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEII 709
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF L K L EIV +M ++ +RL+ +++ + +T K K+ EEG + YGARPLRRAI
Sbjct: 710 VFHSLEKKHLAEIVSLMSDQLTKRLKEQDLSIELTEAAKAKVAEEGVDLEYGARPLRRAI 769
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
+ +ED L+E +L G I G + +D + G V+
Sbjct: 770 QKHVEDRLSEELLRGNIHKGHHIVLDVEDGEFVV 803
>gi|299541899|ref|ZP_07052222.1| negative regulator of genetic competence clpC/mecB [Lysinibacillus
fusiformis ZC1]
gi|424739339|ref|ZP_18167758.1| negative regulator of genetic competence clpC/mecB [Lysinibacillus
fusiformis ZB2]
gi|298725637|gb|EFI66278.1| negative regulator of genetic competence clpC/mecB [Lysinibacillus
fusiformis ZC1]
gi|422946736|gb|EKU41142.1| negative regulator of genetic competence clpC/mecB [Lysinibacillus
fusiformis ZB2]
Length = 814
Score = 309 bits (792), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 146/273 (53%), Positives = 199/273 (72%), Gaps = 9/273 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+R+DMSEYMEKH+
Sbjct: 524 AIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEVMFGDEDAMIRVDMSEYMEKHS 583
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVGF++GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 584 TSRLVGSPPGYVGFDDGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDS 643
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+ VD +NT++IMTSN+G + + LG M+ + EEL++ FRPEFL
Sbjct: 644 KGRVVDFRNTVVIMTSNVGADALKYQKNLGFNVGGAESKHKDMKGTMLEELKKAFRPEFL 703
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE+IVF L K L EI+ +M + +RL+ +++ L +T +K+ EEGY+P YGA
Sbjct: 704 NRIDEMIVFHALEKEHLKEIIAMMGNALTKRLKEQDISLELTDAALEKIAEEGYDPQYGA 763
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMD 265
RPLRRA+ + +ED L+E +L G ++ G+ V +D
Sbjct: 764 RPLRRALQKQVEDRLSEELLKGNVEKGNQVVID 796
>gi|422016627|ref|ZP_16363208.1| protein disaggregation chaperone [Providencia burhodogranariea DSM
19968]
gi|414092612|gb|EKT54287.1| protein disaggregation chaperone [Providencia burhodogranariea DSM
19968]
Length = 857
Score = 309 bits (792), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 149/268 (55%), Positives = 199/268 (74%), Gaps = 1/268 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SF+F GPTGVGKTEL ALA F S +AMVRIDMSE+MEKH+
Sbjct: 583 AIRRSRAGLSDPNRPIGSFMFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA-RESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT+IIMTSN+G +I R ++G +M+ V E + FRPEF+NRIDEV+V
Sbjct: 703 QGRTVDFRNTVIIMTSNLGSDLIQERFGVIGYSEMKDMVMEVVAHSFRPEFINRIDEVVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L K +M I +I L +Y+RLE E++ T +K+ E G++P +GARPL+RAI
Sbjct: 763 FHPLGKEHIMNIANIQLARLYKRLEEHGYEVSATPAALEKIGEAGFDPIFGARPLKRAIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDS 268
+ +E+ LA+ IL+G + G VT+D ++
Sbjct: 823 QEIENPLAQEILSGKLIPGKPVTLDVEN 850
>gi|289551675|ref|YP_003472579.1| ATP-dependent Clp protease, ATP-binding subunit ClpC/Negative
regulator of genetic competence clcC/mecB
[Staphylococcus lugdunensis HKU09-01]
gi|315659135|ref|ZP_07912000.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
lugdunensis M23590]
gi|385785222|ref|YP_005761395.1| putative stress response-related Clp ATPase [Staphylococcus
lugdunensis N920143]
gi|418416002|ref|ZP_12989205.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
lugdunensis ACS-027-V-Sch2]
gi|289181206|gb|ADC88451.1| ATP-dependent Clp protease, ATP-binding subunit ClpC/Negative
regulator of genetic competence clcC/mecB
[Staphylococcus lugdunensis HKU09-01]
gi|315495859|gb|EFU84189.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
lugdunensis M23590]
gi|339895478|emb|CCB54806.1| putative stress response-related Clp ATPase [Staphylococcus
lugdunensis N920143]
gi|410873860|gb|EKS21794.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
lugdunensis ACS-027-V-Sch2]
Length = 819
Score = 309 bits (792), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 147/272 (54%), Positives = 202/272 (74%), Gaps = 9/272 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAETMFGEEDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFLNRI 175
VD +NT+IIMTSN+G + + G + + + + +EL+ FRPEFLNR+
Sbjct: 646 RVDFRNTVIIMTSNVGAQELQDQRFAGFGGASEGQDYETIRKTMMKELKNAFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L+K +L EIV +M+ ++ +RL +++++ VT K+ + EEGY+P YGARPL
Sbjct: 706 DDIIVFHKLSKDELKEIVTMMVNKLTQRLSEQDIQIEVTDKAKEVIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RAI + +EDNL+E+IL G G +VT+D D
Sbjct: 766 IRAIQKTVEDNLSELILEGNQIEGKAVTIDHD 797
>gi|172036856|ref|YP_001803357.1| ATP-dependent Clp protease ATP-binding subunit [Cyanothece sp. ATCC
51142]
gi|354554660|ref|ZP_08973964.1| ATP-dependent chaperone ClpB [Cyanothece sp. ATCC 51472]
gi|171698310|gb|ACB51291.1| ATP-dependent Clp protease, ATP-binding subunit [Cyanothece sp.
ATCC 51142]
gi|353553469|gb|EHC22861.1| ATP-dependent chaperone ClpB [Cyanothece sp. ATCC 51472]
Length = 872
Score = 309 bits (792), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 151/270 (55%), Positives = 195/270 (72%), Gaps = 6/270 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRP +SF+F GPTGVGKTELA ALA F ++EA+VRIDMSEYMEKH+
Sbjct: 589 AIQRSRAGLSDPNRPTASFIFLGPTGVGKTELAKALAKNLFDTEEAIVRIDMSEYMEKHS 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTEA+R RP+SVILFDEIEKAH DV N+MLQ+LDDGR+TD
Sbjct: 649 VSRLIGAPPGYVGYDEGGQLTEAIRRRPYSVILFDEIEKAHGDVFNIMLQILDDGRLTDS 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS----DQMERGVAEELRRRFRPEFLNRIDE 177
+G+ VD KNTIIIMTSNIG I + G D+M V + +R FRPEFLNRIDE
Sbjct: 709 QGRVVDFKNTIIIMTSNIGSQYIL--DVAGDDSHYDEMRSRVMDAMRNNFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+F L K QL EIV + ++ + RLE + M L + + + GY+P YGARPL+R
Sbjct: 767 IIIFHSLEKEQLREIVKLQIQLLRSRLEDQKMSLKLADVALDFVADIGYDPVYGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
A+ R LE +A+ IL G + GD++ D +
Sbjct: 827 AVQRYLETPIAKSILRGEFKPGDTIFADVE 856
>gi|163791642|ref|ZP_02186039.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Carnobacterium sp. AT7]
gi|159873091|gb|EDP67198.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Carnobacterium sp. AT7]
Length = 830
Score = 309 bits (792), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 140/277 (50%), Positives = 204/277 (73%), Gaps = 9/277 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G++DPNRPI SF+F GPTGVGKTELA ALA FG++EA+VR+DMSE+MEK++
Sbjct: 531 AIRRSRSGLKDPNRPIGSFMFLGPTGVGKTELAKALAEAMFGNEEALVRVDMSEFMEKYS 590
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG++ GGQLTE +R +P+SVILFDE+EKAH DV N++LQ+LDDG +TD
Sbjct: 591 TSRLIGSPPGYVGYDEGGQLTEKIRQKPYSVILFDEVEKAHPDVFNILLQVLDDGHLTDS 650
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+ VD KNT++IMTSN+G + + E +G ME+ + EEL++ F+PEF+
Sbjct: 651 KGRKVDFKNTVMIMTSNLGATALRDEKSVGFGTANSKKDHSAMEKRIMEELKKTFKPEFI 710
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRID+ IVF L K +L +IV +M + + +RL+ ++++ +T + + + GY+P YGA
Sbjct: 711 NRIDDSIVFHSLEKPELTQIVKLMAQTVVKRLKDMDIDVKITQSAIDVIAKAGYDPEYGA 770
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
RP+RRA+ + +ED L+E +L+G +++GD VT+ G
Sbjct: 771 RPIRRALQKEIEDRLSEELLSGRVKIGDQVTIGATKG 807
>gi|335425025|ref|ZP_08554016.1| ATP-dependent chaperone ClpB [Salinisphaera shabanensis E1L3A]
gi|334886701|gb|EGM25048.1| ATP-dependent chaperone ClpB [Salinisphaera shabanensis E1L3A]
Length = 861
Score = 309 bits (792), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 144/266 (54%), Positives = 195/266 (73%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ++A F ++ AMVRIDMSE+MEKH+
Sbjct: 583 AIRRSRSGLSDPNRPIGSFLFLGPTGVGKTELCKSIATFLFDTESAMVRIDMSEFMEKHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG+E GG LTEAVR +P+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VARLIGAPPGYVGYEQGGYLTEAVRRKPYSVILLDEVEKAHSDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVF 181
+G+TVD +NT+I+MTSN+G +I S D M V E + + FRPEF+NRIDE +VF
Sbjct: 703 QGRTVDFRNTVIVMTSNLGSQLIQELSDTSYDTMRESVMEVVAQHFRPEFINRIDESVVF 762
Query: 182 RQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGR 241
L + Q+ EI I ++E++ RL + + L +++ KL E G++P YGARPL+R+I
Sbjct: 763 HPLAQAQIREIARIQMRELHTRLAERELTLDISNAAVDKLAEAGFDPVYGARPLKRSIQT 822
Query: 242 LLEDNLAEIILTGYIQVGDSVTMDCD 267
L+E+ LA+ IL G GD+VT+D D
Sbjct: 823 LVENPLAKRILAGEFVAGDTVTVDLD 848
>gi|352516241|ref|YP_004885558.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Tetragenococcus halophilus NBRC 12172]
gi|348600348|dbj|BAK93394.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Tetragenococcus halophilus NBRC 12172]
Length = 830
Score = 309 bits (791), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 145/277 (52%), Positives = 202/277 (72%), Gaps = 9/277 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++ RAR G++DPNRPI SF+F GPTGVGKTELA LA FG ++A++R+DMSEYMEK++
Sbjct: 536 SIRRARSGLKDPNRPIGSFMFLGPTGVGKTELAKTLAESMFGEEDALIRLDMSEYMEKYS 595
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG++ GGQLTE VR +P+SVIL DE+EKAH +V N +LQ+LDDG++TD
Sbjct: 596 TSRLIGSPPGYVGYDEGGQLTEKVRSKPYSVILLDEVEKAHPEVFNTLLQVLDDGQLTDS 655
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG++VD +NTI+IMTSNIG I E+ +G + M++ + EEL++ FRPEFL
Sbjct: 656 KGRSVDFRNTILIMTSNIGAQEIREETNVGFNVVDVKQDHEAMQKRILEELKKAFRPEFL 715
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NR+DE IVFR L K ++ EIV IM K + +R+E ++++L +T + E G++P YGA
Sbjct: 716 NRVDETIVFRSLEKDEIHEIVKIMSKSVVKRMEEQDIQLKITPAAIDVIGEAGFDPEYGA 775
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
RP+RRA+ + +ED L+E +L+G I G VT+ G
Sbjct: 776 RPIRRALQKEIEDRLSEALLSGEIYFGSRVTIGASKG 812
>gi|282896326|ref|ZP_06304348.1| Chaperone protein clpB 2 [Raphidiopsis brookii D9]
gi|281198822|gb|EFA73701.1| Chaperone protein clpB 2 [Raphidiopsis brookii D9]
Length = 871
Score = 309 bits (791), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 151/269 (56%), Positives = 195/269 (72%), Gaps = 6/269 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRPI+SF+F GPTGVGKTELA ALA F ++E++VRIDMSEYMEKHT
Sbjct: 589 AIQRSRAGLADPNRPIASFIFLGPTGVGKTELAKALAAYMFDTEESLVRIDMSEYMEKHT 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTE +R RP++VILFDEIEKAH DV N+ LQ+LDDGRVTD
Sbjct: 649 VSRLIGAPPGYVGYEEGGQLTETIRRRPYAVILFDEIEKAHPDVFNIFLQILDDGRVTDS 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS----DQMERGVAEELRRRFRPEFLNRIDE 177
+G+TVD KNTIIIMTSNIG I + G D+M V E +R FRPEFLNRIDE
Sbjct: 709 QGRTVDFKNTIIIMTSNIGSQYIL--DVAGDDSRYDEMRHRVMETMRNSFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+F L K +L +IV + ++ + +RL + M L ++ + L E GY+P +GARPL+R
Sbjct: 767 IIIFHSLQKSELRKIVQLQVERLTQRLTDRKMSLELSGSALDFLAEVGYDPVFGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
A+ R LE +A+ IL G GD + +D
Sbjct: 827 ALQRELETQIAKAILRGEFDEGDRIFVDV 855
>gi|428308083|ref|YP_007144908.1| ATP-dependent chaperone ClpB [Crinalium epipsammum PCC 9333]
gi|428249618|gb|AFZ15398.1| ATP-dependent chaperone ClpB [Crinalium epipsammum PCC 9333]
Length = 885
Score = 309 bits (791), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 149/269 (55%), Positives = 199/269 (73%), Gaps = 2/269 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SFLF GPTGVGKTELA ALA F S+EA+VRIDMSEYMEKH
Sbjct: 596 AIRRARAGMKDPGRPIGSFLFMGPTGVGKTELARALAQFLFDSEEALVRIDMSEYMEKHA 655
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQL+EA+R RP+SV+L DE+EKAH DV N++LQ+LDDGR+TD
Sbjct: 656 VSRLVGAPPGYVGYEEGGQLSEAIRRRPYSVVLLDEVEKAHPDVFNILLQVLDDGRITDS 715
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS--DQMERGVAEELRRRFRPEFLNRIDEVI 179
+G+TVD NT+I+MTSNIG I S S D+M++ V + LR FRPEFLNRID++I
Sbjct: 716 QGRTVDFCNTVIVMTSNIGSDHILNISGDDSQYDEMQKRVTDALRSHFRPEFLNRIDDLI 775
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
+F LN+ +L +IV+I +K I + L + +++ ++ T + L E GY+P YGARPL+RAI
Sbjct: 776 IFHTLNRNELSQIVNIQIKRIEQLLADQKIKIELSPTAQAHLAEAGYDPVYGARPLKRAI 835
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDS 268
R L++ +A IL GD++ +D D+
Sbjct: 836 QRELQNPIATKILENTFLEGDTILVDSDN 864
>gi|408355460|ref|YP_006843991.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Amphibacillus
xylanus NBRC 15112]
gi|407726231|dbj|BAM46229.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Amphibacillus
xylanus NBRC 15112]
Length = 811
Score = 309 bits (791), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 144/282 (51%), Positives = 203/282 (71%), Gaps = 9/282 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+RIDMSEYMEKHT
Sbjct: 526 AIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEAMFGDEDAMIRIDMSEYMEKHT 585
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG+E GGQLTE VR +P+SV+L DEIEKAH +V N++LQ+L+DGR+TD
Sbjct: 586 TSRLVGSPPGYVGYEEGGQLTEKVRSKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDS 645
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+ VD +NT++IMTSN+G S + + +G QM+ V + L++ FRPEFL
Sbjct: 646 KGRLVDFRNTVLIMTSNVGASELQKNKFVGFNIDDHQTDHKQMKANVTDALKKAFRPEFL 705
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE IVF L + + +IV +M++++ +RL + ++ T+++ +K+ EEG++P YGA
Sbjct: 706 NRIDETIVFHALERGHMKDIVTLMVRQLQDRLVKQGLDFTISNKAIEKIAEEGFDPEYGA 765
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
RPLRR+I + +ED L+E +L G I +++ + S G I+
Sbjct: 766 RPLRRSIQKNIEDLLSEALLRGEINKNETIRIGLSSNGKFII 807
>gi|156740924|ref|YP_001431053.1| ATPase [Roseiflexus castenholzii DSM 13941]
gi|156232252|gb|ABU57035.1| ATPase AAA-2 domain protein [Roseiflexus castenholzii DSM 13941]
Length = 871
Score = 309 bits (791), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 148/274 (54%), Positives = 201/274 (73%), Gaps = 2/274 (0%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DPNRP+ SFLF GPTGVGKTELA ALA F ++AMVRIDMSEYMEKHTV++
Sbjct: 589 RARAGLQDPNRPLGSFLFLGPTGVGKTELARALAEFLFDDEQAMVRIDMSEYMEKHTVAR 648
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E GGQLTEAVR +P+SV+LFDE+EKAH DV N++LQ+LDDGR+TDG G+
Sbjct: 649 LIGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNILLQILDDGRLTDGHGR 708
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSDQ--MERGVAEELRRRFRPEFLNRIDEVIVFR 182
V+ KNT+IIMTSNI I + G+ Q + V EELR + RPEFLNRIDE+IVF+
Sbjct: 709 VVNFKNTVIIMTSNIASPTIQELAQRGASQDIIRASVMEELRTQLRPEFLNRIDEIIVFK 768
Query: 183 QLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGRL 242
L++ Q+ +IV+I L + L + + L ++ ++KL+ EGY+P +GARPL+R I +
Sbjct: 769 PLSREQIGQIVEIQLNRLRRLLADRKISLELSPAAREKLVAEGYDPVFGARPLKRVIQQR 828
Query: 243 LEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYR 276
+++ LA +L G + GD++ +D G++ R
Sbjct: 829 IQNPLALHLLQGEFRDGDTILIDVAPDGSLAFER 862
>gi|309810835|ref|ZP_07704636.1| negative regulator of genetic competence ClpC/MecB [Dermacoccus sp.
Ellin185]
gi|308435141|gb|EFP58972.1| negative regulator of genetic competence ClpC/MecB [Dermacoccus sp.
Ellin185]
Length = 874
Score = 309 bits (791), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 149/280 (53%), Positives = 202/280 (72%), Gaps = 10/280 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R R G++DP RP SF+F GPTGVGKTELA +LA FG ++A++ +DMSEY EKHT
Sbjct: 535 AIRRTRAGLKDPRRPGGSFIFAGPTGVGKTELAKSLAEFLFGDEDALITLDMSEYAEKHT 594
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ FGSPPGYVG+E GGQLTE VR +P SV+LFDE+EKAH D+ N +LQ+L+DGR+TD
Sbjct: 595 VSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHADIFNSLLQILEDGRLTDS 654
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
+G+ VD KNT+IIMT+N+G IA+ LG D+M+ V EEL++ FRPEF
Sbjct: 655 QGRVVDFKNTVIIMTTNLGTRDIAKGVSLGFAAGNDQRSNYDRMKAKVGEELKQHFRPEF 714
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNR+D+ IVF QL++ +++EIVD+M+ ++ ERL+ ++M + +T K L + GY+P+ G
Sbjct: 715 LNRVDDTIVFPQLSQAEIVEIVDLMVAKLDERLKDQDMAIELTQGAKDLLAKRGYDPALG 774
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGN 271
ARPLRR I R +ED L+E IL G I GD V +D + G
Sbjct: 775 ARPLRRTIQREIEDQLSEKILFGEISKGDLVLVDVEGEGK 814
>gi|294495078|ref|YP_003541571.1| ATP-dependent chaperone ClpB [Methanohalophilus mahii DSM 5219]
gi|292666077|gb|ADE35926.1| ATP-dependent chaperone ClpB [Methanohalophilus mahii DSM 5219]
Length = 869
Score = 309 bits (791), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 151/268 (56%), Positives = 196/268 (73%), Gaps = 2/268 (0%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RA GI+DP RPI SF+F GPTGVGKTELA ALA E F S++ M+RIDMSEYMEKHTV++
Sbjct: 590 RAHAGIKDPRRPIGSFIFLGPTGVGKTELAKALATELFDSEDHMIRIDMSEYMEKHTVAR 649
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGY+G + GGQLTEAVR P+SV+LFDEIEKAH DV N+MLQLLDDGR+TD KG+
Sbjct: 650 LIGAPPGYIGHDEGGQLTEAVRRNPYSVVLFDEIEKAHHDVFNIMLQLLDDGRLTDSKGR 709
Query: 125 TVDLKNTIIIMTSNIG-DSVIAR-ESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVFR 182
TVD KNTI+IMTSNI D I++ E + +M+ EL + FRPEFLNRIDE+ +FR
Sbjct: 710 TVDFKNTIVIMTSNICVDYAISKLEEGVAYSKMQETAMNELTKHFRPEFLNRIDEIAIFR 769
Query: 183 QLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGRL 242
L K QL IVDI ++++ +RL+ + ++L +T KK L + GY+ +YGARPL+R I
Sbjct: 770 ALTKDQLTYIVDIKIEDLVQRLKERRIDLEITDRAKKYLGDAGYSETYGARPLKRVIQNE 829
Query: 243 LEDNLAEIILTGYIQVGDSVTMDCDSGG 270
LE + + I++ + D+V +D D G
Sbjct: 830 LETEVGKRIVSKEVMESDTVVVDADERG 857
>gi|367467387|ref|ZP_09467329.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Patulibacter
sp. I11]
gi|365817543|gb|EHN12499.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Patulibacter
sp. I11]
Length = 866
Score = 309 bits (791), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 149/280 (53%), Positives = 201/280 (71%), Gaps = 11/280 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G++DP RP SF+F GPTGVGKTELA +LA FG +AMVR+DMSEYMEKH
Sbjct: 536 AIRRSRAGLKDPKRPTGSFIFLGPTGVGKTELAKSLAHFLFGDADAMVRVDMSEYMEKHA 595
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ GSPPGYVG++ GGQLTEAVR +P+SV+L DEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 596 VSRLVGSPPGYVGYDEGGQLTEAVRRKPYSVLLLDEIEKAHPDVFNLLLQILEDGRLTDS 655
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG-----------SDQMERGVAEELRRRFRPE 170
+G+TVD ++ I+IMTSNIG S IA+ + LG + M++ V EL++ F+PE
Sbjct: 656 QGRTVDFRHAIVIMTSNIGASEIAKSTPLGFQVGDEDESLTYEDMKQRVTGELKKAFKPE 715
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNRIDEVIVF +L K ++ +IVD+ML + L+ + + L +T K L E+G++P+
Sbjct: 716 FLNRIDEVIVFHKLTKPEITQIVDLMLDRVRVSLKDRELTLELTDGLKDLLAEKGWDPAM 775
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGG 270
GARPLRRAI R +ED LA+ +L I+ G +V +D G
Sbjct: 776 GARPLRRAIQRYIEDPLADFVLANQIKPGATVKIDVAPEG 815
>gi|326498075|dbj|BAJ94900.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 946
Score = 309 bits (791), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 150/295 (50%), Positives = 212/295 (71%), Gaps = 12/295 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+RVG+ DP+RPI++ LF GPTGVGKTEL ALA YFGS+ AMVR+DMSEYME+H
Sbjct: 645 AVKRSRVGMSDPDRPIATLLFCGPTGVGKTELTKALASTYFGSESAMVRLDMSEYMERHA 704
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGY+GF GG LTEAVR +P +V+LFDEIEKAH D+ N++LQ+ +DG +TD
Sbjct: 705 VSKLIGSPPGYMGFGEGGTLTEAVRRKPFTVVLFDEIEKAHPDIFNILLQVFEDGHLTDS 764
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESI-LG----SDQ-------MERGVAEELRRRFRP 169
+G+ V KNT+I+MTSN+G + I++ ++ +G SD M+ V EEL+ FRP
Sbjct: 765 QGRRVSFKNTLIVMTSNVGSTSISKGTMSMGFQTQSDTEENTYAVMKSLVMEELKAFFRP 824
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
E LNR+DEV+VFR L K Q++ I++I+++E+ RL A + L V+ K + ++GY+ S
Sbjct: 825 ELLNRMDEVVVFRPLEKTQMLAILNIIMEEVKGRLLALGIGLVVSDAMKNMISQQGYDKS 884
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMTV 284
YGARPLRRA+ +L+ED ++E IL+G + GD++ MD D G + R + ++ V
Sbjct: 885 YGARPLRRAVTQLVEDVISEAILSGQYKPGDTIMMDTDDKGKPCLSRLNDQTVQV 939
>gi|398303898|ref|ZP_10507484.1| genetic competence negative regulator ClpC/MecB [Bacillus
vallismortis DV1-F-3]
Length = 810
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 149/274 (54%), Positives = 196/274 (71%), Gaps = 9/274 (3%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTGVGKTELA ALA FG +EAM+RIDMSEYMEKH+ S+ GS
Sbjct: 530 GLKDPKRPIGSFIFLGPTGVGKTELARALAESIFGDEEAMIRIDMSEYMEKHSTSRLVGS 589
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG++ GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+L+DGR+TD KG+TVD
Sbjct: 590 PPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDF 649
Query: 129 KNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFLNRIDEVI 179
+NTI+IMTSN+G S + R +G M+ V EL+R FRPEF+NRIDE+I
Sbjct: 650 RNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEII 709
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF L K L EIV +M ++ +RL+ +++ + +T K K+ EEG + YGARPLRRAI
Sbjct: 710 VFHSLEKKHLTEIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAI 769
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
+ +ED L+E +L G I G + +D + G V+
Sbjct: 770 QKHVEDRLSEELLRGNIHKGQHIVLDVEDGEFVV 803
>gi|390959920|ref|YP_006423677.1| ATP-dependent chaperone ClpB [Terriglobus roseus DSM 18391]
gi|390414838|gb|AFL90342.1| ATP-dependent chaperone ClpB [Terriglobus roseus DSM 18391]
Length = 879
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 150/268 (55%), Positives = 195/268 (72%), Gaps = 3/268 (1%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DP RPI SF+F GPTGVGKTE A ALA F ++AMVRIDMSEYMEKH
Sbjct: 591 AIRRSRAGLSDPKRPIGSFIFLGPTGVGKTETARALADFMFDDEQAMVRIDMSEYMEKHA 650
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVGF+ GGQLTEAVR RP++VILFDEIEKAH DV NV+LQ+LDDGR+TD
Sbjct: 651 VARLIGAPPGYVGFDEGGQLTEAVRRRPYAVILFDEIEKAHPDVFNVLLQVLDDGRLTDA 710
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMERG---VAEELRRRFRPEFLNRIDEV 178
KG+TVD KNT++I+TSNIG S + G D E V EEL++ FRPEFLNR+D++
Sbjct: 711 KGRTVDFKNTVLILTSNIGASALTTAWAEGPDGFEDAKTRVLEELKKHFRPEFLNRVDDL 770
Query: 179 IVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRA 238
+VF L + QL IVD+ L E+ L + ++L +T + + E GY+ +YGARPL+RA
Sbjct: 771 VVFHSLGEEQLTHIVDLRLGELQALLTDRKIKLELTPKARHLIFEAGYDRAYGARPLKRA 830
Query: 239 IGRLLEDNLAEIILTGYIQVGDSVTMDC 266
I R+++D LA IL+G ++ GD V +D
Sbjct: 831 IQRMVQDPLAIKILSGEVRHGDHVVVDA 858
>gi|428224381|ref|YP_007108478.1| ATP-dependent chaperone ClpB [Geitlerinema sp. PCC 7407]
gi|427984282|gb|AFY65426.1| ATP-dependent chaperone ClpB [Geitlerinema sp. PCC 7407]
Length = 885
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 154/280 (55%), Positives = 196/280 (70%), Gaps = 13/280 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRP +SF+F GPTGVGKTELA ALA F +++AMVRIDMSEYMEKHT
Sbjct: 589 AIQRSRAGLADPNRPTASFIFLGPTGVGKTELAKALAAFLFDTEDAMVRIDMSEYMEKHT 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTEA+R RP+SVILFDEIEKAH DV NVMLQ+LDDGRVTD
Sbjct: 649 VSRLIGAPPGYVGYDEGGQLTEAIRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRVTDA 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVI-------------ARESILGSDQMERGVAEELRRRFR 168
+G TVD NTIIIMTSNIG I + L ++M+ V + LR FR
Sbjct: 709 QGHTVDFTNTIIIMTSNIGSQYILDLPSSAVSATSGTEDDTLQYEEMKSRVMDALRSSFR 768
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNRIDE+I+F +L K Q+ +IV + + ERL + M L ++ L + GY+P
Sbjct: 769 PEFLNRIDEIIIFHRLYKTQIRQIVRLQTLRLSERLADRKMTLKLSDAALDFLADVGYDP 828
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDS 268
YGARPL+RAI R LE +A+ IL G GD++ +D ++
Sbjct: 829 VYGARPLKRAIQRELETQIAKRILRGEFLAGDTIFVDIEN 868
>gi|402848341|ref|ZP_10896604.1| ClpB protein [Rhodovulum sp. PH10]
gi|402501346|gb|EJW12995.1| ClpB protein [Rhodovulum sp. PH10]
Length = 869
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 147/272 (54%), Positives = 203/272 (74%), Gaps = 1/272 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DPNRPI SF+F GPTGVGKTEL ALA F ++AMVRIDMSEYMEKH
Sbjct: 588 AVRRARAGLQDPNRPIGSFMFLGPTGVGKTELTKALAEFLFDDEQAMVRIDMSEYMEKHA 647
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG+E GG LTEA+R RP+ VILFDEIEKAH DV NV+LQ+LDDGR+TDG
Sbjct: 648 VARLIGAPPGYVGYEEGGALTEAIRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDG 707
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESI-LGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT+IIMTSN+G V+ ++ SD ++ V +R FRPEFLNR+DE+I+
Sbjct: 708 QGRTVDFRNTLIIMTSNLGSQVLMEQAEGEDSDLVKAQVMAVVRSAFRPEFLNRVDEIIL 767
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F +L + Q+ IV+I L + + L+ + + L++ K+ L ++G++P+YGARPL+RAI
Sbjct: 768 FHRLEREQMGRIVEIQLGRLQKLLDERKIALSLDARAKEWLADKGFDPTYGARPLKRAIQ 827
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
+ ++D LAE+IL G ++ GD+V++ G V
Sbjct: 828 KAVQDPLAELILAGKVKDGDTVSVTSGPAGLV 859
>gi|375089908|ref|ZP_09736230.1| hypothetical protein HMPREF9708_00620 [Facklamia languida CCUG
37842]
gi|374566194|gb|EHR37441.1| hypothetical protein HMPREF9708_00620 [Facklamia languida CCUG
37842]
Length = 825
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 152/286 (53%), Positives = 198/286 (69%), Gaps = 9/286 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++ P RPI SFLF GPTGVGKTELA LA FGS+E M+RIDMSEYMEKH+
Sbjct: 539 AIRRARSGLKSPQRPIGSFLFLGPTGVGKTELAKTLADSMFGSQENMIRIDMSEYMEKHS 598
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
+S+ GSPPGYVG++ GQLTE VR +P+SVIL DEIEKAH DV N++LQ+ DDG++TDG
Sbjct: 599 ISRMIGSPPGYVGYDEAGQLTEKVRQKPYSVILLDEIEKAHPDVFNLLLQVFDDGQLTDG 658
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+ VD +NTIIIMTSN+G + + + +G ME + EEL+R FRPEFL
Sbjct: 659 KGRQVDFRNTIIIMTSNLGATALRDDKSVGFGAVDYSHDFKAMEARIMEELKRAFRPEFL 718
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE IVF+ L K Q+ EIV + I RL ++ +T T + E G++P YGA
Sbjct: 719 NRIDETIVFKSLTKDQIREIVKLHTAVIISRLADMEIKARITETAVDIIAESGFDPEYGA 778
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHR 278
RP+RRAI + +ED L+E++L G I++GD +T+ SG I R +
Sbjct: 779 RPIRRAIQKQIEDELSEMLLDGSIELGDQITIGGRSGSININNRSK 824
>gi|70727483|ref|YP_254399.1| endopeptidase Clp ATP-binding subunit C [Staphylococcus
haemolyticus JCSC1435]
gi|122063324|sp|Q4L3I4.1|CLPC_STAHJ RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|68448209|dbj|BAE05793.1| endopeptidas Clp ATP-binding chain C [Staphylococcus haemolyticus
JCSC1435]
Length = 824
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 147/272 (54%), Positives = 199/272 (73%), Gaps = 9/272 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEEDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG + GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDEGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFLNRI 175
VD +NT+IIMTSN+G + + G + + + + +EL+ FRPEFLNR+
Sbjct: 646 QVDFRNTVIIMTSNVGAQELQDQRFAGFGGGSEGHDYETIRKTMMKELKNSFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L+K +L EIV +M+ ++ +RL +++ + VT K+K+ EEGY+P YGARPL
Sbjct: 706 DDIIVFHKLSKDELKEIVTMMVNKLTQRLSEQDINIVVTDKAKEKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RAI + +EDNL+E+IL G G V +D D
Sbjct: 766 IRAIQKTVEDNLSELILDGNQIEGKEVVIDHD 797
>gi|296333083|ref|ZP_06875537.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305672785|ref|YP_003864456.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus subtilis subsp. spizizenii str. W23]
gi|350264184|ref|YP_004875491.1| genetic competence negative regulator ClpC/MecB [Bacillus subtilis
subsp. spizizenii TU-B-10]
gi|296149699|gb|EFG90594.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305411028|gb|ADM36146.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus subtilis subsp. spizizenii str. W23]
gi|349597071|gb|AEP84859.1| Negative regulator of genetic competence ClpC/MecB [Bacillus
subtilis subsp. spizizenii TU-B-10]
Length = 810
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 149/274 (54%), Positives = 196/274 (71%), Gaps = 9/274 (3%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTGVGKTELA ALA FG +EAM+RIDMSEYMEKH+ S+ GS
Sbjct: 530 GLKDPKRPIGSFIFLGPTGVGKTELARALAESIFGDEEAMIRIDMSEYMEKHSTSRLVGS 589
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG++ GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+L+DGR+TD KG+TVD
Sbjct: 590 PPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDF 649
Query: 129 KNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFLNRIDEVI 179
+NTI+IMTSN+G S + R +G M+ V EL+R FRPEF+NRIDE+I
Sbjct: 650 RNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEII 709
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF L K L EIV +M ++ +RL+ +++ + +T K K+ EEG + YGARPLRRAI
Sbjct: 710 VFHSLEKKHLTEIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAI 769
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
+ +ED L+E +L G I G + +D + G V+
Sbjct: 770 QKHVEDRLSEELLRGNIHKGQHIVLDVEDGEFVV 803
>gi|16331154|ref|NP_441882.1| ClpB protein [Synechocystis sp. PCC 6803]
gi|383322897|ref|YP_005383750.1| ClpB protein [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383326066|ref|YP_005386919.1| ClpB protein [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383491950|ref|YP_005409626.1| ClpB protein [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384437218|ref|YP_005651942.1| ClpB protein [Synechocystis sp. PCC 6803]
gi|451815311|ref|YP_007451763.1| ClpB protein [Synechocystis sp. PCC 6803]
gi|54035750|sp|P74459.1|CLPB1_SYNY3 RecName: Full=Chaperone protein ClpB 1
gi|1653648|dbj|BAA18560.1| ClpB protein [Synechocystis sp. PCC 6803]
gi|339274250|dbj|BAK50737.1| ClpB protein [Synechocystis sp. PCC 6803]
gi|359272216|dbj|BAL29735.1| ClpB protein [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359275386|dbj|BAL32904.1| ClpB protein [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359278556|dbj|BAL36073.1| ClpB protein [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407961469|dbj|BAM54709.1| ClpB protein [Bacillus subtilis BEST7613]
gi|451781280|gb|AGF52249.1| ClpB protein [Synechocystis sp. PCC 6803]
Length = 898
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 148/270 (54%), Positives = 197/270 (72%), Gaps = 2/270 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP+RPI SFLF GPTGVGKTELA ALA F S+EAMVRIDMSEYMEKH
Sbjct: 598 AIRRARAGMKDPSRPIGSFLFMGPTGVGKTELARALAGFLFDSEEAMVRIDMSEYMEKHA 657
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQL+EAVR RP+SV+L DE+EKAH DV N++LQ+LDDGR+TD
Sbjct: 658 VSRLIGAPPGYVGYEEGGQLSEAVRRRPYSVVLLDEVEKAHLDVFNILLQVLDDGRITDS 717
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS--DQMERGVAEELRRRFRPEFLNRIDEVI 179
+G+ VD +NTII+MTSNIG I S + D+M++ V + LR+ FRPEFLNRID++I
Sbjct: 718 QGRVVDFRNTIIVMTSNIGSDHILSLSADDADYDKMQKQVLQSLRKHFRPEFLNRIDDLI 777
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
+F L + +L IV + +K I + L+ + + L+++ ++ GY+P+YGARPL+RAI
Sbjct: 778 IFHTLKRDELRRIVVLQIKRIEKLLDEQKITLSLSDAALDHIVSAGYDPTYGARPLKRAI 837
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
R LE+ +A IL GD + +DC G
Sbjct: 838 QRQLENPIATKILENTFVAGDKILIDCVDG 867
>gi|347531245|ref|YP_004838008.1| ATPase AAA-2 [Roseburia hominis A2-183]
gi|345501393|gb|AEN96076.1| ATPase AAA-2 [Roseburia hominis A2-183]
Length = 817
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 154/272 (56%), Positives = 194/272 (71%), Gaps = 11/272 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R RVG++DP RPI SFLF GPTGVGKTE++ ALA FG ++AM+RIDMSEYMEKH+
Sbjct: 530 AVRRGRVGLKDPKRPIGSFLFLGPTGVGKTEISKALAEAVFGQEQAMIRIDMSEYMEKHS 589
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG E+GGQL+E VR P++VILFDEIEKAH DV N++LQ+LDDG +TD
Sbjct: 590 VSKMIGSPPGYVGHEDGGQLSEKVRRNPYAVILFDEIEKAHPDVFNILLQVLDDGHITDS 649
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
+G+ VD KNTIIIMTSN G I LG ++M+ V EE+RR F+PEF
Sbjct: 650 QGRKVDFKNTIIIMTSNAGAQAIVEPKKLGFASGNDEKQNYERMKGSVMEEVRRIFKPEF 709
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAK-NMELTVTHTFKKKLIEEGYNPSY 230
LNRIDE IVFR LNK + +IV +M KE+ +R E + + L V K+ ++++ Y+P Y
Sbjct: 710 LNRIDETIVFRALNKDDMKQIVGLMTKELAKRCETQLGITLVVRDAAKQYIVDKAYDPKY 769
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSV 262
GARPLRR I +ED LAE +L G I+ GD V
Sbjct: 770 GARPLRRKIQDEIEDPLAEKLLDGSIRRGDEV 801
>gi|389573541|ref|ZP_10163615.1| negative regulator of genetic competence ClpC/mecB [Bacillus sp. M
2-6]
gi|388426856|gb|EIL84667.1| negative regulator of genetic competence ClpC/mecB [Bacillus sp. M
2-6]
Length = 811
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 148/274 (54%), Positives = 198/274 (72%), Gaps = 9/274 (3%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTGVGKTELA ALA FG +EAM+RIDMSEYMEKH+ S+ GS
Sbjct: 531 GLKDPKRPIGSFIFLGPTGVGKTELARALAESIFGDEEAMIRIDMSEYMEKHSTSRLVGS 590
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG++ GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+L+DGR+TD KG+TVD
Sbjct: 591 PPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDF 650
Query: 129 KNTIIIMTSNIGDSVIARESILGSD---------QMERGVAEELRRRFRPEFLNRIDEVI 179
+NTI+IMTSN+G S + R +G + M+ V EL+R FRPEF+NRIDE+I
Sbjct: 651 RNTILIMTSNVGASELKRNKYVGFNVQDESQNYKDMKGKVMGELKRAFRPEFINRIDEII 710
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF L K L EIV +M ++ +RL+ +++ + +T K K+ +EG + YGARPLRRAI
Sbjct: 711 VFHSLEKKHLKEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIADEGVDLEYGARPLRRAI 770
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
+ +ED L+E +L G I+ G + +D + G V+
Sbjct: 771 QKHVEDRLSEELLKGNIEKGQHIVLDVEDGEIVV 804
>gi|313885400|ref|ZP_07819150.1| negative regulator of genetic competence ClpC/MecB [Eremococcus
coleocola ACS-139-V-Col8]
gi|312619130|gb|EFR30569.1| negative regulator of genetic competence ClpC/MecB [Eremococcus
coleocola ACS-139-V-Col8]
Length = 819
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 147/277 (53%), Positives = 201/277 (72%), Gaps = 9/277 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RA G+++PNRPI SFLF GPTGVGKTELA ALA FGS++ M+R+DMSEYMEKHT
Sbjct: 534 AIRRAYSGLKNPNRPIGSFLFLGPTGVGKTELAKALASAMFGSQDNMIRVDMSEYMEKHT 593
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GQLTE VR +P+SVIL DE+EKAH DV N++LQ+ DDG +TDG
Sbjct: 594 VSRLVGAPPGYVGYDEAGQLTEQVRQKPYSVILLDEVEKAHPDVFNILLQVFDDGHLTDG 653
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---SD------QMERGVAEELRRRFRPEFL 172
KG+ VD +NTIIIMTSN+G + + + +G SD M+ + EE++R FRPEF+
Sbjct: 654 KGRKVDFRNTIIIMTSNMGATALRDDKSVGFGVSDVSQDHKAMQSRIMEEVKRGFRPEFI 713
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE+IVF LNK ++ +IV + KE+ RL + +T T + E G++P YGA
Sbjct: 714 NRIDEIIVFHALNKEEIRQIVKLQTKEVIARLSDMEIGARITDTAVDIIAEAGFDPEYGA 773
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
RP+RRAI + +ED+L+E++L G I++GD++T+ G
Sbjct: 774 RPIRRAIQKQIEDSLSEMLLKGEIELGDAITIGGRQG 810
>gi|428209571|ref|YP_007093924.1| ATP-dependent chaperone ClpB [Chroococcidiopsis thermalis PCC 7203]
gi|428011492|gb|AFY90055.1| ATP-dependent chaperone ClpB [Chroococcidiopsis thermalis PCC 7203]
Length = 875
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 152/271 (56%), Positives = 195/271 (71%), Gaps = 6/271 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRPI+SF+F GPTGVGKTELA ALA F ++EA+VRIDMSEYMEKH
Sbjct: 589 AIQRSRAGLADPNRPIASFIFLGPTGVGKTELAKALAAYLFDTEEALVRIDMSEYMEKHA 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTEA+R RP+SV+LFDEIEKAH DV NVMLQ+LDDGRVTD
Sbjct: 649 VSRLIGAPPGYVGYDEGGQLTEAIRRRPYSVVLFDEIEKAHPDVFNVMLQILDDGRVTDA 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD----QMERGVAEELRRRFRPEFLNRIDE 177
+G TVD KNTI+IMTSNIG I I G D +M V E +R FRPEFLNRIDE
Sbjct: 709 QGHTVDFKNTIVIMTSNIGSQYIL--DIAGDDSRYEEMRGRVMEAMRNSFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+F L +L +IV + ++ + +RL + M L ++ L E GY+P +GARPL+R
Sbjct: 767 IIIFHALQIQELRQIVKLQIQRLEQRLGDRKMSLRLSDAALDFLAEVGYDPVFGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDS 268
AI R LE +A+ IL GD++ +D ++
Sbjct: 827 AIQRELETQIAKSILRNEFNDGDTIFVDVEN 857
>gi|320109104|ref|YP_004184694.1| ATP-dependent chaperone ClpB [Terriglobus saanensis SP1PR4]
gi|319927625|gb|ADV84700.1| ATP-dependent chaperone ClpB [Terriglobus saanensis SP1PR4]
Length = 869
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 148/278 (53%), Positives = 202/278 (72%), Gaps = 5/278 (1%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DP RPI SF+F GPTGVGKTE A ALA F ++AMVRIDMSEYMEKH
Sbjct: 589 AIRRSRAGLSDPKRPIGSFIFLGPTGVGKTETARALAEFLFDDEQAMVRIDMSEYMEKHA 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG++ GGQLTEA+R RP++V+LFDEIEKAH DV NV+LQ+LDDGR+TD
Sbjct: 649 VARLIGAPPGYVGYDEGGQLTEAIRRRPYAVVLFDEIEKAHPDVFNVLLQVLDDGRLTDS 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMERG---VAEELRRRFRPEFLNRIDEV 178
KG+TVD KNT++IMTSN G S+++ G D E V +ELR++FRPEFLNR+D++
Sbjct: 709 KGRTVDFKNTVLIMTSNTGASILSSAWASGEDGFEEAKVRVMDELRKQFRPEFLNRVDDI 768
Query: 179 IVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRA 238
+VF L + QL I+D+ LK++ L + + L +T + + + GY+ +YGARPL+RA
Sbjct: 769 VVFHPLAESQLTHIIDLRLKDLENLLADRRITLDMTPAARHLIFKSGYDRAYGARPLKRA 828
Query: 239 IGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYR 276
I RL++D LA IL+G + GD V +D + G+ + +R
Sbjct: 829 IQRLVQDPLAMRILSGEVLHGDHVVVDAE--GDKLAFR 864
>gi|212712900|ref|ZP_03321028.1| hypothetical protein PROVALCAL_03997 [Providencia alcalifaciens DSM
30120]
gi|422019412|ref|ZP_16365960.1| protein disaggregation chaperone [Providencia alcalifaciens Dmel2]
gi|212684445|gb|EEB43973.1| hypothetical protein PROVALCAL_03997 [Providencia alcalifaciens DSM
30120]
gi|414103251|gb|EKT64829.1| protein disaggregation chaperone [Providencia alcalifaciens Dmel2]
Length = 857
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 149/268 (55%), Positives = 199/268 (74%), Gaps = 1/268 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SF+F GPTGVGKTEL ALA F S +AMVRIDMSE+MEKH+
Sbjct: 583 AIRRSRAGLSDPNRPIGSFMFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA-RESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT+IIMTSN+G +I R ++G +M+ V E + FRPEF+NRIDEV+V
Sbjct: 703 QGRTVDFRNTVIIMTSNLGSDLIQERFGMIGYSEMKDMVMEVVAHNFRPEFINRIDEVVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L K Q+ I +I L +Y+RLE E+T T +K+ E G++P +GARPL+RAI
Sbjct: 763 FHPLGKEQITNIANIQLARLYKRLEEHGYEVTATAAALEKIGEAGFDPIFGARPLKRAIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDS 268
+ +E+ LA+ IL+G + G +T+D ++
Sbjct: 823 QEIENPLAQEILSGKLIPGKPITLDVEN 850
>gi|297582418|ref|YP_003698198.1| ATPase AAA-2 domain-containing protein [Bacillus selenitireducens
MLS10]
gi|297140875|gb|ADH97632.1| ATPase AAA-2 domain protein [Bacillus selenitireducens MLS10]
Length = 815
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 149/283 (52%), Positives = 202/283 (71%), Gaps = 9/283 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA A+A FG ++A++RIDMSEYMEKH S+
Sbjct: 532 RARAGLKDPKRPIGSFIFLGPTGVGKTELARAVAETLFGDEDAIIRIDMSEYMEKHNTSR 591
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPGYVG + GGQLTE VR +P+SVIL DEIEKAH +V N++LQ+L+DG +TD KG+
Sbjct: 592 LVGSPPGYVGHDEGGQLTEKVRRKPYSVILLDEIEKAHPEVFNILLQVLEDGFLTDSKGR 651
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG--SDQ-------MERGVAEELRRRFRPEFLNRI 175
VD +NT +IMTSN+G + +E LG ++Q M+ V EEL++ FRPEFLNRI
Sbjct: 652 RVDFRNTAVIMTSNVGAQALKQEKSLGFTANQEDAKYKDMKSKVMEELKKSFRPEFLNRI 711
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
DE IVF L K + EIV +M E+ +RL+ + ++ ++ K+K+ +EG++P YGARPL
Sbjct: 712 DETIVFHSLEKSHISEIVTLMAGELQKRLKEQEIDFELSDKAKEKIADEGFDPEYGARPL 771
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHR 278
RRA+ + +ED L+E +L G I G SV +D + G V+ + R
Sbjct: 772 RRALQKQVEDRLSEELLRGTISKGQSVVLDVEDGEYVVRQKER 814
>gi|365926352|ref|ZP_09449115.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus mali KCTC 3596 = DSM 20444]
Length = 821
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 148/288 (51%), Positives = 204/288 (70%), Gaps = 10/288 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DPNRPI SF+F GPTGVGKTELA +LA FGS+++M+RIDMSEYMEK+
Sbjct: 527 AIRRARSGLKDPNRPIGSFMFLGPTGVGKTELAKSLAEVIFGSEDSMIRIDMSEYMEKYA 586
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG+E GGQLTE VR P+SVILFDE+EKAH DV N++LQ+LDDG ++D
Sbjct: 587 TSRLIGSPPGYVGYEEGGQLTEKVRQHPYSVILFDEVEKAHPDVFNILLQVLDDGYLSDS 646
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---SD------QMERGVAEELRRRFRPEFL 172
KG+ VD KNTIIIMTSN+G + + E +G +D +M + E L++ FRPEFL
Sbjct: 647 KGRKVDFKNTIIIMTSNLGATALRDEKEVGFGSTDSANDFTKMSAKINEILKKSFRPEFL 706
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE I+F L K +L +IV +M E+ R+ A+N+ + +T + + G++P YGA
Sbjct: 707 NRIDETIIFHSLKKEELHKIVKLMANELLNRVRAQNVSIKITPAAVDVITKNGFDPEYGA 766
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGG-NVIMYRHRN 279
RP+RRA+ +ED L+E+++TG ++VG VT+ G N+ + + N
Sbjct: 767 RPIRRALQTEVEDKLSELLITGQVKVGSKVTIGASKGKINITVSENEN 814
>gi|383454395|ref|YP_005368384.1| ATP-dependent chaperone protein ClpB [Corallococcus coralloides DSM
2259]
gi|380732359|gb|AFE08361.1| ATP-dependent chaperone protein ClpB [Corallococcus coralloides DSM
2259]
Length = 874
Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 151/273 (55%), Positives = 197/273 (72%), Gaps = 5/273 (1%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DPNRPI SF+F GPTGVGKTE A ALA F AMVRIDMSEYMEKH
Sbjct: 585 AVRRARSGLQDPNRPIGSFIFLGPTGVGKTETAKALAEFLFDDDTAMVRIDMSEYMEKHA 644
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEAVR RP++V+LFDEIEKAH DV N++LQ+LD+GRVTD
Sbjct: 645 VSRLVGAPPGYVGYEEGGQLTEAVRRRPYTVVLFDEIEKAHHDVFNILLQILDEGRVTDS 704
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQME---RG-VAEELRRRFRPEFLNRIDE 177
+G+TVD +NT++I+TSNIG I +E + G+D + RG V E LR FRPEFLNR+DE
Sbjct: 705 QGRTVDFRNTVLILTSNIGSQAI-QEGMAGTDTLNEKTRGEVMEALRAHFRPEFLNRVDE 763
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+++F L K + IVDI L ++ + L+AK + L +T + ++ L E GY+P+YGARPL+R
Sbjct: 764 IVIFEPLRKKDIYRIVDIQLGKLQKLLQAKRLTLDLTDSARELLAERGYDPTYGARPLKR 823
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGG 270
A+ + L D LA +L G G+ + D G
Sbjct: 824 AVQKYLLDPLAIKVLNGEFAPGEHIQADAGPDG 856
>gi|358068823|ref|ZP_09155271.1| hypothetical protein HMPREF9333_02156 [Johnsonella ignava ATCC
51276]
gi|356693003|gb|EHI54696.1| hypothetical protein HMPREF9333_02156 [Johnsonella ignava ATCC
51276]
Length = 862
Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 152/276 (55%), Positives = 197/276 (71%), Gaps = 11/276 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R RVG++DP RPI SFLF GPTGVGKTEL+ ALA FG++ A++R+DMSEYME+H+
Sbjct: 558 AIRRGRVGLKDPKRPIGSFLFLGPTGVGKTELSKALAECMFGTENALIRVDMSEYMERHS 617
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGY+G++ GGQL+E VR P+SVILFDE+EKAH DV NV+LQ+LDDG +TD
Sbjct: 618 VSKMVGSPPGYIGYDEGGQLSEKVRRNPYSVILFDEVEKAHPDVFNVLLQVLDDGHITDA 677
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
G+ +D KNTIIIMTSN+G I +LG +M+ GV EEL R F+PEF
Sbjct: 678 HGRRIDFKNTIIIMTSNVGAERIVSPKLLGFTSAVDDAADHKKMKEGVLEELGRLFKPEF 737
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYER-LEAKNMELTVTHTFKKKLIEEGYNPSY 230
LNRIDE IVF QL K + EI++I+L++I +R +E +M L V+ K LI++GY+ Y
Sbjct: 738 LNRIDETIVFHQLTKENMHEILEILLRDINKRTIEQMDMRLEVSDAAKDFLIDKGYDKKY 797
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
GARPL+R + LED LAE +L G I+ D+V D
Sbjct: 798 GARPLKRTLQNYLEDKLAESVLDGSIKNKDTVLADI 833
>gi|320539058|ref|ZP_08038732.1| protein disaggregation chaperone [Serratia symbiotica str. Tucson]
gi|320030898|gb|EFW12903.1| protein disaggregation chaperone [Serratia symbiotica str. Tucson]
Length = 859
Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 149/268 (55%), Positives = 199/268 (74%), Gaps = 1/268 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F S EA+VRIDMSE+MEKH+
Sbjct: 583 AIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALASFLFDSDEAIVRIDMSEFMEKHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV NV+LQ+LDDGR+TDG
Sbjct: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNVLLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARE-SILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT++IMTSN+G ++ + +QM+ V E + FRPEF+NRIDEV+V
Sbjct: 703 QGRTVDFRNTVVIMTSNLGSDLVQEHFGQMSYEQMKESVMEMVSHHFRPEFINRIDEVVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L++ + EIV I L +Y+RLE + E+T+T + L + G++P YGARPL+RAI
Sbjct: 763 FHPLSQNHIAEIVKIQLARLYKRLEERGYEVTMTEPALELLGKTGFDPVYGARPLKRAIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDS 268
+ +E+ LA+ IL+G + G VT+D ++
Sbjct: 823 QEIENPLAQEILSGMLIPGKLVTLDVEN 850
>gi|411120315|ref|ZP_11392691.1| ATP-dependent chaperone ClpB [Oscillatoriales cyanobacterium
JSC-12]
gi|410710471|gb|EKQ67982.1| ATP-dependent chaperone ClpB [Oscillatoriales cyanobacterium
JSC-12]
Length = 873
Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 152/279 (54%), Positives = 195/279 (69%), Gaps = 6/279 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRP++SF+F GPTGVGKTELA ALA F ++EAMVRIDMSEYMEKH
Sbjct: 589 AIQRSRAGLADPNRPVASFIFLGPTGVGKTELAKALAAYLFDTEEAMVRIDMSEYMEKHA 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTEA+R RP++VILFDEIEKAH DV N+ LQ+LDDGRVTD
Sbjct: 649 VSRLIGAPPGYVGYDEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNIFLQILDDGRVTDA 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQ----MERGVAEELRRRFRPEFLNRIDE 177
+G TVD KNTIIIMTSNIG I + G D M V + +R +FRPEFLNR+DE
Sbjct: 709 QGHTVDFKNTIIIMTSNIGSQFIL--DVAGDDTQYEVMRSRVIDAMRAQFRPEFLNRVDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
I+F L K +L IV + + + +RL + M L ++ L + GY+P YGARPL+R
Sbjct: 767 FIIFHGLQKSELRNIVKLQTQRLEQRLGDRKMSLKLSDAAIDFLADVGYDPVYGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYR 276
AI R LE +A+ IL G Q GD++ +D ++ R
Sbjct: 827 AIQRELETQIAKSILRGEFQDGDTIFVDVGENERLVFKR 865
>gi|410084770|ref|ZP_11281491.1| ClpB protein [Morganella morganii SC01]
gi|409768415|gb|EKN52475.1| ClpB protein [Morganella morganii SC01]
Length = 812
Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 148/269 (55%), Positives = 196/269 (72%), Gaps = 1/269 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F S +AMVRIDMSE+MEKH+
Sbjct: 538 AIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALADFLFDSDDAMVRIDMSEFMEKHS 597
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 598 VARLIGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 657
Query: 122 KGQTVDLKNTIIIMTSNIG-DSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT++IMTSN+G D + L D M+ V E + FRPEF+NRIDEV+V
Sbjct: 658 QGRTVDFRNTVVIMTSNLGSDRIQEHFGELNYDAMKGAVMEVVSHHFRPEFINRIDEVVV 717
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L K Q+ I I LK +Y+RLE ++T+T + KL E G++P +GARPL+RAI
Sbjct: 718 FHPLAKEQIHAIAKIQLKRLYKRLEEHGYQVTITDSALDKLAEAGFDPVFGARPLKRAIQ 777
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
+ +E+ +A+ +L+G + G +T+D G
Sbjct: 778 QEIENPMAQAMLSGKLIPGKMITLDLTDG 806
>gi|429766605|ref|ZP_19298863.1| ATP-dependent chaperone protein ClpB [Clostridium celatum DSM 1785]
gi|429184099|gb|EKY25131.1| ATP-dependent chaperone protein ClpB [Clostridium celatum DSM 1785]
Length = 866
Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 149/263 (56%), Positives = 194/263 (73%), Gaps = 2/263 (0%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++D NRPI SF+F GPTGVGKTELA LA F S+E ++RIDMSEYMEKH VS+
Sbjct: 593 RARAGLKDVNRPIGSFIFLGPTGVGKTELAKTLARNLFDSEENIIRIDMSEYMEKHAVSR 652
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E GGQLTEAVR +P+SVILFDEIEKAH DV N+ LQ+LDDGR+TD KG+
Sbjct: 653 LVGAPPGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHEDVFNMFLQILDDGRLTDNKGK 712
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGS--DQMERGVAEELRRRFRPEFLNRIDEVIVFR 182
TVD KNTIIIMTSNIG S + + + Q+ V E++ RF+PEFLNR+D++I+F+
Sbjct: 713 TVDFKNTIIIMTSNIGSSYLLENTSEDTIDPQIREQVMNEMKMRFKPEFLNRVDDIIMFK 772
Query: 183 QLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGRL 242
L++ + +I+DI + E+ RL+ +N+ L +T K L EGY+P YGARPL+R I
Sbjct: 773 PLSESGITKIIDIFVNEVSNRLKDRNISLEITPEAKHILAVEGYDPVYGARPLKRYIQNT 832
Query: 243 LEDNLAEIILTGYIQVGDSVTMD 265
LE+ LA +I+ G + G VT+D
Sbjct: 833 LENKLARLIIAGEVNYGSHVTID 855
>gi|169830065|ref|YP_001700223.1| negative regulator of genetic competence clpC/mecB [Lysinibacillus
sphaericus C3-41]
gi|168994553|gb|ACA42093.1| Negative regulator of genetic competence clpC/mecB [Lysinibacillus
sphaericus C3-41]
Length = 813
Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 145/273 (53%), Positives = 199/273 (72%), Gaps = 9/273 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+R+DMSEYMEKH+
Sbjct: 523 AIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEVMFGDEDAMIRVDMSEYMEKHS 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVGF++GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 583 TSRLVGSPPGYVGFDDGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDS 642
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+ VD +NT++IMTSN+G + + LG M+ + EEL++ FRPEFL
Sbjct: 643 KGRVVDFRNTVVIMTSNVGADALKYQKSLGFNVGGADSKHKDMKSTMLEELKKAFRPEFL 702
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE+IVF L K L EI+ +M + +RL+ +++ L +T +K+ +EGY+P YGA
Sbjct: 703 NRIDEMIVFHSLEKEHLKEIIAMMGNALTKRLKEQDISLELTDAALEKIAQEGYDPQYGA 762
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMD 265
RPLRRA+ + +ED L+E +L G ++ G+ V +D
Sbjct: 763 RPLRRALQKQVEDRLSEELLKGNVEKGNHVIID 795
>gi|334119144|ref|ZP_08493231.1| ATP-dependent chaperone ClpB [Microcoleus vaginatus FGP-2]
gi|333458615|gb|EGK87232.1| ATP-dependent chaperone ClpB [Microcoleus vaginatus FGP-2]
Length = 871
Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 151/268 (56%), Positives = 199/268 (74%), Gaps = 3/268 (1%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRP++SF+F GPTGVGKTELA ALA F ++EA+VRIDMSEYMEKH
Sbjct: 590 AIQRSRAGLADPNRPVASFIFLGPTGVGKTELAKALASYLFDTEEAIVRIDMSEYMEKHA 649
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTEAVR RP+SVILFDEIEKAH DV N+MLQ+LDDGRVTD
Sbjct: 650 VSRLIGAPPGYVGYDEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNIMLQILDDGRVTDA 709
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG-SDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G TVD KN++IIMTSN+G I + G +++M V E +R FRPEFLNRIDE+I+
Sbjct: 710 QGHTVDFKNSVIIMTSNVGSQYIL--DVAGDNEEMRSRVMEAMRGTFRPEFLNRIDEMII 767
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L+K +L +IV + +K + +RL + M L ++ + L E GY+P YGARPL+R I
Sbjct: 768 FHGLSKAELRQIVLLQVKRLEKRLADRKMSLKLSESAIDFLAEIGYDPVYGARPLKRGIQ 827
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDS 268
R LE +A+ IL G GD++ +D ++
Sbjct: 828 RELETQMAKGILRGDFADGDTIFVDIEN 855
>gi|389842947|ref|YP_006345027.1| chaperone ATPase [Mesotoga prima MesG1.Ag.4.2]
gi|387857693|gb|AFK05784.1| ATPase with chaperone activity, ATP-binding subunit [Mesotoga prima
MesG1.Ag.4.2]
Length = 829
Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 149/293 (50%), Positives = 212/293 (72%), Gaps = 13/293 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++ RAR G++DP RPI +FLF GPTGVGKTELA ALA FG +A+VR DMSEYME+ +
Sbjct: 533 SIRRARSGLKDPRRPIGTFLFLGPTGVGKTELAKALAEYLFGDDKALVRFDMSEYMERFS 592
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GG LTE +R RP SVILFDEIEKAH D+ N++LQ++DDGR+TD
Sbjct: 593 VSRLIGAPPGYVGYDEGGTLTERIRKRPFSVILFDEIEKAHPDIFNILLQIMDDGRLTDS 652
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-ESILG----------SDQMERGVAEELRRRFRPE 170
+G+ VD +NTI+IMTSN+G I + +S +G + M+ V EE++R FRPE
Sbjct: 653 QGRQVDFRNTIVIMTSNLGGEFINKTKSSIGFVESSHEEKEYEAMKTSVLEEVKRTFRPE 712
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNR+DEV+VF QL K Q+ I+DI++ ++ +RL K+++L ++ ++ L+EEG+NP Y
Sbjct: 713 FLNRLDEVVVFHQLTKDQIKTIIDILMNDMRKRLNEKHLKLILSEAAQEFLVEEGFNPVY 772
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMT 283
GARPL+RAI + +ED L+E +L G Q GD +T + D+ V++++ + T
Sbjct: 773 GARPLKRAIQKYVEDPLSEELLRGRFQDGDLITAEVDN--RVLIFKKKKDEKT 823
>gi|421494136|ref|ZP_15941488.1| CLPB [Morganella morganii subsp. morganii KT]
gi|455738463|ref|YP_007504729.1| ClpB protein [Morganella morganii subsp. morganii KT]
gi|400191693|gb|EJO24837.1| CLPB [Morganella morganii subsp. morganii KT]
gi|455420026|gb|AGG30356.1| ClpB protein [Morganella morganii subsp. morganii KT]
Length = 857
Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 148/269 (55%), Positives = 196/269 (72%), Gaps = 1/269 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F S +AMVRIDMSE+MEKH+
Sbjct: 583 AIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALADFLFDSDDAMVRIDMSEFMEKHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VARLIGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIG-DSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT++IMTSN+G D + L D M+ V E + FRPEF+NRIDEV+V
Sbjct: 703 QGRTVDFRNTVVIMTSNLGSDRIQEHFGELNYDAMKGAVMEVVSHHFRPEFINRIDEVVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L K Q+ I I LK +Y+RLE ++T+T + KL E G++P +GARPL+RAI
Sbjct: 763 FHPLAKEQIHAIAKIQLKRLYKRLEEHGYQVTITDSALDKLAEAGFDPVFGARPLKRAIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
+ +E+ +A+ +L+G + G +T+D G
Sbjct: 823 QEIENPMAQAMLSGKLIPGKMITLDLTDG 851
>gi|443328933|ref|ZP_21057525.1| ATP-dependent chaperone ClpB [Xenococcus sp. PCC 7305]
gi|442791478|gb|ELS00973.1| ATP-dependent chaperone ClpB [Xenococcus sp. PCC 7305]
Length = 893
Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 144/268 (53%), Positives = 198/268 (73%), Gaps = 3/268 (1%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SFLF GPTGVGKTELA ALA F S+EAM+RIDMSEYMEKH
Sbjct: 596 AIRRARAGMKDPGRPIGSFLFMGPTGVGKTELARALAAFLFDSEEAMIRIDMSEYMEKHA 655
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQL+EAVR RP+SV+L DE+EKAH+DV N++LQ+LDDGR+TD
Sbjct: 656 VSRLVGAPPGYVGYEEGGQLSEAVRRRPYSVVLLDEVEKAHKDVFNILLQVLDDGRITDS 715
Query: 122 KGQTVDLKNTIIIMTSNIGDS---VIARESILGSDQMERGVAEELRRRFRPEFLNRIDEV 178
+G+ VD +NTII+MTSN+G I+ E+ +++E+ V + LR+ FRPEF+NRID++
Sbjct: 716 QGRVVDFRNTIIVMTSNVGSEHILNISGENDTKYEEVEKRVTQALRKHFRPEFVNRIDDL 775
Query: 179 IVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRA 238
I+F L + QL +IV I +K I L + + + ++ + +++E GY+P++GARPL+RA
Sbjct: 776 IIFHSLKREQLRDIVTIQIKRIENLLAEQKIAIKLSDSALDRIVEVGYDPAFGARPLKRA 835
Query: 239 IGRLLEDNLAEIILTGYIQVGDSVTMDC 266
I R LE+ +A IL GD + +DC
Sbjct: 836 IQRELENPIATKILDNSFAEGDEILVDC 863
>gi|421076461|ref|ZP_15537448.1| ATPase AAA-2 domain protein [Pelosinus fermentans JBW45]
gi|392525472|gb|EIW48611.1| ATPase AAA-2 domain protein [Pelosinus fermentans JBW45]
Length = 812
Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 148/279 (53%), Positives = 204/279 (73%), Gaps = 11/279 (3%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTGVGKTELA ALA F + +M+R+DMSEYMEKHTVS+ G+
Sbjct: 533 GLKDPKRPIGSFIFLGPTGVGKTELAKALAATLFNDESSMIRLDMSEYMEKHTVSRLIGA 592
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG++ GGQLT+AVR +P++VIL DEIEKAH DV N++LQ+L+DGR+TD +G+ VD
Sbjct: 593 PPGYVGYDEGGQLTDAVRRKPYAVILLDEIEKAHYDVFNILLQVLEDGRLTDSQGRKVDF 652
Query: 129 KNTIIIMTSNIGDSVIARES----ILGSDQM-------ERGVAEELRRRFRPEFLNRIDE 177
KNT+IIMTSN+G + R++ L D+M + V EE++R FRPEF+NR+DE
Sbjct: 653 KNTVIIMTSNVGAKHLRRDNTMLGFLADDKMNNEAENAKNRVMEEVKRTFRPEFINRVDE 712
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+IVF L +L IVDIMLK++ +RLE + L + K +L++EG + +YGARPLRR
Sbjct: 713 MIVFGSLTDTELTSIVDIMLKDVGKRLEDNTLYLECSDKAKAELVKEGRDYAYGARPLRR 772
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYR 276
AI +L+ED +AE++L + GD+V +D D+ G V + +
Sbjct: 773 AIQKLVEDEIAELMLRHQVIKGDTVLIDVDADGKVKLMK 811
>gi|392959702|ref|ZP_10325183.1| ATPase AAA-2 domain protein [Pelosinus fermentans DSM 17108]
gi|421056369|ref|ZP_15519287.1| ATPase AAA-2 domain protein [Pelosinus fermentans B4]
gi|421058700|ref|ZP_15521366.1| ATPase AAA-2 domain protein [Pelosinus fermentans B3]
gi|421065887|ref|ZP_15527574.1| ATPase AAA-2 domain protein [Pelosinus fermentans A12]
gi|421070056|ref|ZP_15531193.1| ATPase AAA-2 domain protein [Pelosinus fermentans A11]
gi|392438207|gb|EIW16065.1| ATPase AAA-2 domain protein [Pelosinus fermentans B4]
gi|392448794|gb|EIW25971.1| ATPase AAA-2 domain protein [Pelosinus fermentans A11]
gi|392456086|gb|EIW32845.1| ATPase AAA-2 domain protein [Pelosinus fermentans DSM 17108]
gi|392457903|gb|EIW34503.1| ATPase AAA-2 domain protein [Pelosinus fermentans A12]
gi|392460300|gb|EIW36618.1| ATPase AAA-2 domain protein [Pelosinus fermentans B3]
Length = 813
Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 148/279 (53%), Positives = 204/279 (73%), Gaps = 11/279 (3%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTGVGKTELA ALA F + +M+R+DMSEYMEKHTVS+ G+
Sbjct: 534 GLKDPKRPIGSFIFLGPTGVGKTELAKALAATLFNDESSMIRLDMSEYMEKHTVSRLIGA 593
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG++ GGQLT+AVR +P++VIL DEIEKAH DV N++LQ+L+DGR+TD +G+ VD
Sbjct: 594 PPGYVGYDEGGQLTDAVRRKPYAVILLDEIEKAHYDVFNILLQVLEDGRLTDSQGRKVDF 653
Query: 129 KNTIIIMTSNIGDSVIARES----ILGSDQM-------ERGVAEELRRRFRPEFLNRIDE 177
KNT+IIMTSN+G + R++ L D+M + V EE++R FRPEF+NR+DE
Sbjct: 654 KNTVIIMTSNVGAKHLRRDNTMLGFLADDKMNNEAENAKNRVMEEVKRTFRPEFINRVDE 713
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+IVF L +L IVDIMLK++ +RLE + L + K +L++EG + +YGARPLRR
Sbjct: 714 MIVFGSLTDTELTSIVDIMLKDVGKRLEDNTLYLECSDKAKAELVKEGRDYAYGARPLRR 773
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYR 276
AI +L+ED +AE++L + GD+V +D D+ G V + +
Sbjct: 774 AIQKLVEDEIAELMLRHQVIKGDTVLIDVDADGKVKLMK 812
>gi|254421795|ref|ZP_05035513.1| ATPase, AAA family [Synechococcus sp. PCC 7335]
gi|196189284|gb|EDX84248.1| ATPase, AAA family [Synechococcus sp. PCC 7335]
Length = 871
Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 151/271 (55%), Positives = 199/271 (73%), Gaps = 6/271 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+++R+R G+ DP+RP++SF+F GPTGVGKTELA ALA F ++EAMVRIDMSEYMEKH+
Sbjct: 588 SIQRSRAGLADPDRPMASFIFLGPTGVGKTELAKALASYLFDTEEAMVRIDMSEYMEKHS 647
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTEAVR RP +VILFDEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 648 VSRLVGAPPGYVGYDEGGQLTEAVRRRPFAVILFDEIEKAHPDVFNILLQVLDDGRITDS 707
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS----DQMERGVAEELRRRFRPEFLNRIDE 177
+G+TVD N+IIIMTSNIG I I G D+M V + LR +FRPEFLNRIDE
Sbjct: 708 QGRTVDFTNSIIIMTSNIGSQYIL--DIAGDDTQYDEMRSRVTDALRSQFRPEFLNRIDE 765
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+F L K QL +IV I +K + RLE + + L ++ L + GY+P+YGARPL+R
Sbjct: 766 IIIFHALVKSQLRDIVKIQIKRLEARLEERKLALKLSDAALDFLADVGYDPTYGARPLKR 825
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDS 268
AI R +E +A+ IL GD++ +D ++
Sbjct: 826 AIQREIETKIAKAILRSEFLPGDTIFVDVEN 856
>gi|186684542|ref|YP_001867738.1| ATPase [Nostoc punctiforme PCC 73102]
gi|186466994|gb|ACC82795.1| ATPase AAA-2 domain protein [Nostoc punctiforme PCC 73102]
Length = 872
Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 152/269 (56%), Positives = 194/269 (72%), Gaps = 6/269 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRPI+SF+F GPTGVGKTELA ALA F S++A+VRIDMSEYMEKH
Sbjct: 589 AIQRSRAGLADPNRPIASFIFLGPTGVGKTELAKALAGYMFDSEDALVRIDMSEYMEKHA 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEA+R RP+SVILFDEIEKAH DV N+ LQ+LDDGRVTD
Sbjct: 649 VSRLIGAPPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHPDVFNIFLQILDDGRVTDA 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS----DQMERGVAEELRRRFRPEFLNRIDE 177
+G VD KN IIIMTSNIG I + G D+M R V E +R FRPEFLNRIDE
Sbjct: 709 QGHKVDFKNAIIIMTSNIGSQYIL--DVAGDNAHYDEMRRRVMEAMRNSFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+F L+K +L +IV + ++ + +RL + + L ++ L E GY+P YGARPL+R
Sbjct: 767 IIIFHGLDKKELRQIVLLQVQRLRQRLADRKISLKLSDAALDFLAEVGYDPVYGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
AI R LE +A+ IL G G+++ +D
Sbjct: 827 AIQRELETQIAKAILRGEFTDGNTIFVDV 855
>gi|406909140|gb|EKD49459.1| hypothetical protein ACD_63C00138G0006, partial [uncultured
bacterium]
Length = 870
Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 145/297 (48%), Positives = 208/297 (70%), Gaps = 13/297 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R R G++DPNRPI SF+F GPTGVGKTELA ALA + FG+++ ++R+DMSEYME+H+
Sbjct: 572 AVRRGRAGLKDPNRPIGSFIFLGPTGVGKTELARALAEQVFGNEDTIIRVDMSEYMEQHS 631
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V+K GSPPGYVG+E GGQLTE VR +P+SVIL DEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 632 VAKLTGSPPGYVGYEEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQILDDGRLTDA 691
Query: 122 KGQTVDLKNTIIIMTSNIGDSVI-------------ARESILGSDQMERGVAEELRRRFR 168
KG+ VD KNTIII TSNIG I +E D++ + EL++ FR
Sbjct: 692 KGRAVDFKNTIIIATSNIGSQRIQEVTEGRIGFDDKVKERKADKDELRVELMGELKKTFR 751
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNR+DE+I+F L+K ++ IVD+++K++ L +N+ + +T K K+ +EGY+P
Sbjct: 752 PEFLNRVDEIIIFEALSKNEIRRIVDLLIKDVQRLLHGQNVTIKLTDKAKDKIAKEGYDP 811
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMTVC 285
++GARPL+R I + +++ L+E +L+G + GD++ +D ++G + R TV
Sbjct: 812 TFGARPLKRFIQKEIDNPLSEKLLSGKYKGGDNIEVDVENGKFIFKSSRRKIKQTVA 868
>gi|403385695|ref|ZP_10927752.1| negative regulator of genetic competence clpC/mecB [Kurthia sp.
JC30]
Length = 820
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 150/273 (54%), Positives = 196/273 (71%), Gaps = 9/273 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +++M+RIDMSEYMEKH+
Sbjct: 526 AIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEVMFGDEDSMIRIDMSEYMEKHS 585
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG++ GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 586 TSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLDDGRLTDS 645
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA-RESI-LGSDQMERGVA-------EELRRRFRPEFL 172
KG+ VD +NT++IMTSNIG + R+S+ G+ + + A EEL++ FRPEFL
Sbjct: 646 KGRVVDFRNTVVIMTSNIGAEALKYRKSVGFGAQETSKSEANAKDVMLEELKKAFRPEFL 705
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE IVF L K +L EIV M ++ +RL +N+EL +T K+ EGY+P YGA
Sbjct: 706 NRIDETIVFHSLKKDELAEIVGKMSDQLTKRLSEQNIELELTKAALDKIAAEGYDPEYGA 765
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMD 265
RP+RRA+ + +ED L+E IL G + G V D
Sbjct: 766 RPIRRALQKHVEDRLSEEILKGTVLTGQVVVFD 798
>gi|290476239|ref|YP_003469139.1| ATP-dependent protease [Xenorhabdus bovienii SS-2004]
gi|289175572|emb|CBJ82375.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Xenorhabdus bovienii SS-2004]
Length = 860
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 151/268 (56%), Positives = 198/268 (73%), Gaps = 1/268 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SF+F GPTGVGKTEL ALA F S +AMVR+DMSE+MEKHT
Sbjct: 586 AIRRSRAGLSDPNRPIGSFMFLGPTGVGKTELCKALANFLFDSDDAMVRLDMSEFMEKHT 645
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR RP+SVIL DEIEKAH DV N++LQ+LDDGR+TDG
Sbjct: 646 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDG 705
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA-RESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT+IIMTSN+G +I R L M+ V E + FRPEF+NR+DEV+V
Sbjct: 706 QGRTVDFRNTVIIMTSNLGSDIIQERFGALDYTGMKDMVMEVVGHHFRPEFINRVDEVVV 765
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L K L I +I L+ +Y RLE + ++T+T T +KL + G++P YGARPL+RAI
Sbjct: 766 FHPLGKEHLTSIANIQLQRLYHRLEERGYQVTMTSTALEKLSDAGFDPVYGARPLKRAIQ 825
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDS 268
+ +E+ LA+ IL+G + G VT+D ++
Sbjct: 826 QEIENPLAQKILSGKLIPGKLVTLDLEN 853
>gi|253579478|ref|ZP_04856747.1| ATPase AAA-2 domain-containing protein [Ruminococcus sp.
5_1_39B_FAA]
gi|251848979|gb|EES76940.1| ATPase AAA-2 domain-containing protein [Ruminococcus sp.
5_1_39BFAA]
Length = 820
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 159/275 (57%), Positives = 201/275 (73%), Gaps = 13/275 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R RVG++DPNRPI SFLF GPTGVGKTEL+ ALA FGS++AM+R+DMSEYMEKH+
Sbjct: 533 AVKRGRVGLKDPNRPIGSFLFLGPTGVGKTELSKALAEAVFGSEQAMIRVDMSEYMEKHS 592
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+E GGQL+E VR P+SV+LFDEIEKAH DV N++LQ+LDDG +TD
Sbjct: 593 VSKLIGSPPGYVGYEEGGQLSEKVRRNPYSVLLFDEIEKAHPDVFNILLQVLDDGHITDA 652
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG--SD--------QMERGVAEELRRRFRPEF 171
+G+ VD K TIIIMTSN G I LG SD +M+ GV EE+RR F+PEF
Sbjct: 653 QGRKVDFKQTIIIMTSNAGAQAIMEPKRLGFMSDNDEKKDYERMKGGVMEEVRRIFKPEF 712
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNME--LTVTHTFKKKLIEEGYNPS 229
LNRID+++VF LNK + +IV ++LK + +R A+ ME LTVT+ K + E+G +
Sbjct: 713 LNRIDDIMVFHVLNKEDIRKIVTLLLKTLEKRC-AEQMEIHLTVTNAVKDFIAEKGSDNK 771
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTM 264
YGARPLRRAI +ED LA IL G ++ GDSV +
Sbjct: 772 YGARPLRRAIQSKIEDALANEILEGRVKRGDSVQV 806
>gi|393198912|ref|YP_006460754.1| chaperone ATPase [Solibacillus silvestris StLB046]
gi|327438243|dbj|BAK14608.1| ATPase with chaperone activity, ATP-binding subunit [Solibacillus
silvestris StLB046]
Length = 814
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 146/273 (53%), Positives = 197/273 (72%), Gaps = 9/273 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+R+DMSEYMEKH+
Sbjct: 525 AIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEVMFGDEDAMIRVDMSEYMEKHS 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVGF++GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 585 TSRLVGSPPGYVGFDDGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDS 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+ VD +NT++IMTSN+G + +G M+ + EEL++ FRPEFL
Sbjct: 645 KGRVVDFRNTVVIMTSNVGADALKYRKHVGFGAGLNASKDKDMKSTMLEELKKAFRPEFL 704
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE+IVF L K L EIV +M + +RL+ +++EL +T +K+ EEGY+P YGA
Sbjct: 705 NRIDEMIVFHSLEKDHLKEIVSLMANSLKKRLKEQDIELQLTDAALEKISEEGYDPQYGA 764
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMD 265
RPLRRA+ + +ED L+E +L G + +V +D
Sbjct: 765 RPLRRALQKHVEDRLSEELLKGTLDKTQTVVLD 797
>gi|297564892|ref|YP_003683864.1| ATP-dependent chaperone ClpB [Meiothermus silvanus DSM 9946]
gi|296849341|gb|ADH62356.1| ATP-dependent chaperone ClpB [Meiothermus silvanus DSM 9946]
Length = 855
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 150/271 (55%), Positives = 200/271 (73%), Gaps = 2/271 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DPNRPI SFLF GPTGVGKTELA LA + F ++E MVRIDMSEY EKHT
Sbjct: 574 AIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAAQLFDTEENMVRIDMSEYQEKHT 633
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG+E GGQLTEAVR RP+SVILFDEIEKAH DV NV+LQ+LDDGR+TDG
Sbjct: 634 VARLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNVLLQILDDGRLTDG 693
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR--ESILGSDQMERGVAEELRRRFRPEFLNRIDEVI 179
+G+TVD +NT+II+TSN+G +I ++ L + + V E L++ FRPEFLNR+DE++
Sbjct: 694 QGRTVDFRNTVIILTSNLGSPLILEGIQAGLPYETIRNRVFEVLQKNFRPEFLNRLDEIV 753
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF+ L + Q+ +IV+I L+ + RL + + L ++ K+ L E GY+P +GARPL+R I
Sbjct: 754 VFKPLTQEQIAQIVEIQLEGLRRRLAERRITLELSPEAKRFLAERGYDPVFGARPLKRVI 813
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGG 270
R LE LA+ IL G +Q G + ++ G
Sbjct: 814 QRELETPLAKKILAGEVQDGAYLRVNAGPQG 844
>gi|375089120|ref|ZP_09735456.1| hypothetical protein HMPREF9703_01538 [Dolosigranulum pigrum ATCC
51524]
gi|374560921|gb|EHR32274.1| hypothetical protein HMPREF9703_01538 [Dolosigranulum pigrum ATCC
51524]
Length = 831
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 152/289 (52%), Positives = 201/289 (69%), Gaps = 9/289 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DPNRPI SFLF GPTGVGKTELA LA F S++ ++R+DMSE+MEKH
Sbjct: 535 AIRRARSGLKDPNRPIGSFLFLGPTGVGKTELAKTLAEAMFSSEDHLIRVDMSEFMEKHN 594
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG + GGQLTE +R P+SV+L DE+EKAH DV N++LQ+LDDG++TDG
Sbjct: 595 TSRLIGSPPGYVGHDEGGQLTEKIRQNPYSVVLLDEVEKAHPDVFNLLLQVLDDGQITDG 654
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---SDQ------MERGVAEELRRRFRPEFL 172
KG+ VD KNT+IIMTSN+G + + E +G SD M+ V +EL+ FRPEF+
Sbjct: 655 KGRLVDFKNTVIIMTSNLGATALRDEKTVGFGASDSWADYEAMKDRVLKELKNEFRPEFI 714
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NR+DE IVF L + L EIV+++ ++I RL N++L +THT + E GYNP YGA
Sbjct: 715 NRVDESIVFHSLEQDHLREIVELLSEDIVGRLAEMNIDLKITHTAIDVIGEVGYNPEYGA 774
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGS 281
RPL+RAI LED L++ +L+G + GD VT+ SG + R R S
Sbjct: 775 RPLKRAIQTELEDRLSDALLSGDVIPGDKVTIGARSGEIYLKVRERTAS 823
>gi|315640281|ref|ZP_07895398.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
italicus DSM 15952]
gi|315483943|gb|EFU74422.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
italicus DSM 15952]
Length = 826
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 144/270 (53%), Positives = 199/270 (73%), Gaps = 9/270 (3%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DPNRPI SF+F GPTGVGKTELA ALA FGS++A++R+DMSEYMEK++ S+ GS
Sbjct: 539 GLKDPNRPIGSFMFLGPTGVGKTELAKALAEAMFGSEDALIRVDMSEYMEKYSTSRLIGS 598
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG++ GGQLTE VR +P+SVIL DE+EKAH DV N++LQ+LDDGR+TD KG+ VD
Sbjct: 599 PPGYVGYDEGGQLTEKVRAKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDSKGRNVDF 658
Query: 129 KNTIIIMTSNIGDSVIARESILGSD---------QMERGVAEELRRRFRPEFLNRIDEVI 179
KNTI+IMTSNIG + I E +G + M++ + +EL++ +RPEFLNRIDE +
Sbjct: 659 KNTILIMTSNIGATQIREEKNVGFNVVDVSKDYQSMQKRIMQELKKAYRPEFLNRIDETV 718
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VFR LN+ ++ EIV IM + I RL+ + ++L +T + + G++P YGARP+RRA+
Sbjct: 719 VFRALNQEEIHEIVKIMSQSIVRRLQDQEIQLKITPAALDVIGKVGFDPEYGARPIRRAL 778
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
+ +ED L+E +L G + +GD VT+ G
Sbjct: 779 QKEVEDRLSEALLAGQVHLGDRVTIGAKKG 808
>gi|293392742|ref|ZP_06637060.1| chaperone protein ClpB [Serratia odorifera DSM 4582]
gi|291424601|gb|EFE97812.1| chaperone protein ClpB [Serratia odorifera DSM 4582]
Length = 857
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 148/268 (55%), Positives = 194/268 (72%), Gaps = 1/268 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F S +AMVRIDMSE+MEKH+
Sbjct: 583 AIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALASFLFDSDDAMVRIDMSEFMEKHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARE-SILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT++IMTSN+G +I + QM+ V E + FRPEF+NRIDEV+V
Sbjct: 703 QGRTVDFRNTVVIMTSNLGSDLIQEHFGQMNYAQMKESVMEMVSHHFRPEFINRIDEVVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L + + EI I L +Y+RLE + +T+T L + GY+P YGARPL+RAI
Sbjct: 763 FHPLGQQHIAEIAKIQLARLYQRLEERGYAVTITEPALTLLGKTGYDPVYGARPLKRAIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDS 268
+ +E+ LA+ IL+G + G VT+D ++
Sbjct: 823 QEIENPLAQQILSGALVPGKPVTLDVEN 850
>gi|428221827|ref|YP_007105997.1| ATP-dependent chaperone ClpB [Synechococcus sp. PCC 7502]
gi|427995167|gb|AFY73862.1| ATP-dependent chaperone ClpB [Synechococcus sp. PCC 7502]
Length = 869
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 152/271 (56%), Positives = 196/271 (72%), Gaps = 6/271 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRPI+SF+F GPTGVGKTELA ALA F ++EAMVRIDMSEYMEKH+
Sbjct: 590 AIQRSRAGLSDPNRPIASFIFLGPTGVGKTELAKALANYLFDTEEAMVRIDMSEYMEKHS 649
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTEA+R RP++VILFDEIEKAH DV N+MLQ+LDDGRVTD
Sbjct: 650 VSRLVGAPPGYVGYDEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNIMLQILDDGRVTDS 709
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQ----MERGVAEELRRRFRPEFLNRIDE 177
+G+TVD KN IIIMTSNIG I I G D M V E +R FRPEFLNRIDE
Sbjct: 710 QGRTVDFKNAIIIMTSNIGSQYIL--DIGGDDSKYEIMRDRVMESMRSSFRPEFLNRIDE 767
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+F L + +L +IV + ++ + +RL + M L ++ + + E GY+P YGARPL+R
Sbjct: 768 IIIFHSLRREELRQIVKLQVQRLEQRLSERKMSLHLSESALDFVAEVGYDPVYGARPLKR 827
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDS 268
I R LE +A+ IL G GD + +D ++
Sbjct: 828 VIQRQLETQIAKSILRGDFIDGDHIFVDVEN 858
>gi|73663540|ref|YP_302321.1| stress response-related Clp ATPase [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
gi|122063325|sp|Q49V34.1|CLPC_STAS1 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|72496055|dbj|BAE19376.1| putative stress response-related Clp ATPase [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
Length = 820
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 146/272 (53%), Positives = 199/272 (73%), Gaps = 9/272 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFLNRI 175
VD +NT+IIMTSN+G + + G + + + + +EL+ FRPEFLNR+
Sbjct: 646 RVDFRNTVIIMTSNVGAQELQDQRFAGFGGATEGQDYESIRKTMMKELKNAFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L+K +L +IV +M+ ++ RL +++ ++VT K+K+ EEGY+P YGARPL
Sbjct: 706 DDIIVFHKLSKDELKQIVTMMVNKLTNRLSEQDINISVTEAAKEKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RAI + +EDNL+E+IL G G V +D D
Sbjct: 766 IRAIQKTVEDNLSELILDGNQIEGKEVKIDHD 797
>gi|184201561|ref|YP_001855768.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Kocuria
rhizophila DC2201]
gi|183581791|dbj|BAG30262.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Kocuria
rhizophila DC2201]
Length = 872
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 145/292 (49%), Positives = 209/292 (71%), Gaps = 10/292 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++ R R G++DP RP SF+F GPTGVGKTELA ALA FG ++A++ +DMSEY EKHT
Sbjct: 534 SIRRTRAGLKDPRRPGGSFIFAGPTGVGKTELAKALAEFLFGDEDALITLDMSEYQEKHT 593
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ FG+PPGYVG+E GGQLTE VR +P SV+LFDE+EKAH+D+ N +LQ+L+DGR+TD
Sbjct: 594 VSRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHQDLFNSLLQILEDGRLTDS 653
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
+G+ VD KNT+IIMT+N+G I+R +G D+M+ V EEL+ FRPEF
Sbjct: 654 QGRVVDFKNTVIIMTTNLGTRDISRTVPVGFQASGDAATSYDRMQAKVQEELKEHFRPEF 713
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNR+DE+IVF QL++ ++++IVD+ + + +RL ++M +T+T KK + ++GY+P+ G
Sbjct: 714 LNRVDEIIVFPQLSEAEIVQIVDLFVARLQQRLREQDMSITLTDEAKKLVAKKGYDPAMG 773
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMT 283
ARPLRR + R +ED L+E IL G I G+ +T+ + G+ + + M+
Sbjct: 774 ARPLRRTMQREIEDQLSERILFGEIASGEKITVGVEGEGDDATFTFSSTPMS 825
>gi|406666957|ref|ZP_11074720.1| Negative regulator of genetic competence ClpC/MecB [Bacillus
isronensis B3W22]
gi|405385240|gb|EKB44676.1| Negative regulator of genetic competence ClpC/MecB [Bacillus
isronensis B3W22]
Length = 814
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 146/273 (53%), Positives = 197/273 (72%), Gaps = 9/273 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+R+DMSEYMEKH+
Sbjct: 525 AIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEVMFGDEDAMIRVDMSEYMEKHS 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVGF++GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 585 TSRLVGSPPGYVGFDDGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDS 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+ VD +NT++IMTSN+G + +G M+ + EEL++ FRPEFL
Sbjct: 645 KGRVVDFRNTVVIMTSNVGADALKYRKHVGFGAGLNASKDKDMKSTMLEELKKAFRPEFL 704
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE+IVF L K L EIV +M + +RL+ +++EL +T +K+ EEGY+P YGA
Sbjct: 705 NRIDEMIVFHSLEKDHLKEIVSLMANSLKKRLKEQDIELQLTDAALEKISEEGYDPQYGA 764
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMD 265
RPLRRA+ + +ED L+E +L G + +V +D
Sbjct: 765 RPLRRALQKHVEDRLSEELLKGTLDKTQTVVLD 797
>gi|418577091|ref|ZP_13141221.1| putative stress response-related Clp ATPase [Staphylococcus
saprophyticus subsp. saprophyticus KACC 16562]
gi|379324453|gb|EHY91601.1| putative stress response-related Clp ATPase [Staphylococcus
saprophyticus subsp. saprophyticus KACC 16562]
Length = 820
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 146/272 (53%), Positives = 199/272 (73%), Gaps = 9/272 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFLNRI 175
VD +NT+IIMTSN+G + + G + + + + +EL+ FRPEFLNR+
Sbjct: 646 RVDFRNTVIIMTSNVGAQELQDQRFAGFGGATEGQDYESIRKTMMKELKNAFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L+K +L +IV +M+ ++ RL +++ ++VT K+K+ EEGY+P YGARPL
Sbjct: 706 DDIIVFHKLSKDELKQIVTMMVNKLTNRLSEQDINISVTEAAKEKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RAI + +EDNL+E+IL G G V +D D
Sbjct: 766 IRAIQKTVEDNLSELILDGNQIEGKEVKIDHD 797
>gi|392426238|ref|YP_006467232.1| ATP-dependent chaperone ClpB [Desulfosporosinus acidiphilus SJ4]
gi|391356201|gb|AFM41900.1| ATP-dependent chaperone ClpB [Desulfosporosinus acidiphilus SJ4]
Length = 862
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 150/269 (55%), Positives = 197/269 (73%), Gaps = 2/269 (0%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DPNRP+ SFLF GPTGVGKTELA ALA F +A+VRIDMSEYMEKHTV++
Sbjct: 589 RARAGLQDPNRPLGSFLFLGPTGVGKTELARALAEFLFDDDQALVRIDMSEYMEKHTVAR 648
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E GGQLTEAVR +P+SVILFDE EKAH DV NV+LQLLDDGR+TDG+G+
Sbjct: 649 LIGAPPGYVGYEEGGQLTEAVRRKPYSVILFDETEKAHSDVTNVLLQLLDDGRLTDGQGR 708
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSDQME--RGVAEELRRRFRPEFLNRIDEVIVFR 182
V+ KNT++I+TSNI +I S + Q E + EELR+ FRPEFLNR+DEVIVF
Sbjct: 709 IVNFKNTVVILTSNIASPLIQEMSRRNAAQEEVRSAINEELRQHFRPEFLNRLDEVIVFH 768
Query: 183 QLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGRL 242
L++ + +IV+I L + +RL + + L +T +KL +EGY+P YGARPL+R I +
Sbjct: 769 PLDRSHIGKIVEIQLGLLRKRLSERKISLELTEQALQKLADEGYDPIYGARPLKRVIQQR 828
Query: 243 LEDNLAEIILTGYIQVGDSVTMDCDSGGN 271
L++ +A +L G + G + +D D G+
Sbjct: 829 LQNPVALKLLQGEFKDGQKIVVDVDVSGD 857
>gi|295094990|emb|CBK84081.1| ATPases with chaperone activity, ATP-binding subunit [Coprococcus
sp. ART55/1]
Length = 827
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 150/274 (54%), Positives = 201/274 (73%), Gaps = 11/274 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+RVG++DP RP+ SFLF GPTGVGKTEL+ ALA FGS++A++R+DMSEYMEKH+
Sbjct: 528 AIKRSRVGLKDPKRPMGSFLFLGPTGVGKTELSKALADIVFGSEDALIRVDMSEYMEKHS 587
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGFE GGQL+E VR P+SV+LFDEIEKAH DV N++LQ+LDDG +TD
Sbjct: 588 VSKMIGSPPGYVGFEEGGQLSEKVRTNPYSVVLFDEIEKAHSDVFNILLQVLDDGHITDS 647
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
+G+ VD KNTIIIMTSN G I LG ++M+ V +EL+R F+PEF
Sbjct: 648 QGRKVDFKNTIIIMTSNTGAQGIVDPKQLGFVTVSDETKEHEKMKSNVMDELKRTFKPEF 707
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAK-NMELTVTHTFKKKLIEEGYNPSY 230
LNRID++IVF L++ + +I +MLKE+ R++ + ++EL T KK + +GY+ Y
Sbjct: 708 LNRIDDIIVFHALSEANVKDITGLMLKELKNRVQTQMDIELKFTDHAKKYIFGKGYDKKY 767
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTM 264
GARPL+RAI +ED LAE +L G ++ GD+VT+
Sbjct: 768 GARPLKRAIQTYVEDVLAEAMLRGDVKKGDTVTV 801
>gi|374309006|ref|YP_005055436.1| ATP-dependent chaperone ClpB [Granulicella mallensis MP5ACTX8]
gi|358751016|gb|AEU34406.1| ATP-dependent chaperone ClpB [Granulicella mallensis MP5ACTX8]
Length = 877
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 148/272 (54%), Positives = 196/272 (72%), Gaps = 3/272 (1%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DP RPI SF+F GPTGVGKTE A ALA F ++AMVRIDMSEYMEKH
Sbjct: 595 AIRRSRAGLSDPKRPIGSFIFLGPTGVGKTETARALAEFLFDDEQAMVRIDMSEYMEKHA 654
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVGF+ GGQLTEA+R RP++V+LFDEIEKAH DV NV+LQ+LDDGR+TD
Sbjct: 655 VARLIGAPPGYVGFDEGGQLTEAIRRRPYAVVLFDEIEKAHPDVFNVLLQVLDDGRLTDS 714
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD---QMERGVAEELRRRFRPEFLNRIDEV 178
KG+TVD KNT++IMTSN+G ++ G D + + V EELR+ FRPEFLNR+D+
Sbjct: 715 KGRTVDFKNTVLIMTSNLGAGQLSTAWAEGEDGFAEAKNRVMEELRKHFRPEFLNRVDDT 774
Query: 179 IVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRA 238
+VF L + QL IVD+ L ++ + L + + LT+T + + + GY+ +YGARPL+RA
Sbjct: 775 VVFHPLGESQLTHIVDLRLADLQKMLADRRITLTLTDAARTAIFKAGYDRAYGARPLKRA 834
Query: 239 IGRLLEDNLAEIILTGYIQVGDSVTMDCDSGG 270
I RL++D LA IL G + GD V ++ D G
Sbjct: 835 IQRLVQDPLAMRILDGRVLHGDRVKVEADKKG 866
>gi|332160283|ref|YP_004296860.1| protein disaggregation chaperone [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325664513|gb|ADZ41157.1| protein disaggregation chaperone [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 857
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 150/269 (55%), Positives = 198/269 (73%), Gaps = 1/269 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F S +AMVRIDMSE+MEKH+
Sbjct: 583 AIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALATFLFDSDDAMVRIDMSEFMEKHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA-RESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT++IMTSN+G +I R +M+ V E + R FRPEF+NRIDEV+V
Sbjct: 703 QGRTVDFRNTVVIMTSNLGSDLIQERFGERSYSEMKEMVMEVVTRHFRPEFINRIDEVVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L + L I I L+ +Y+RLE + ++T+T + L E G++P YGARPL+RAI
Sbjct: 763 FHPLGRAHLASIASIQLERLYKRLEERGYQVTITQPALEFLGETGFDPVYGARPLKRAIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
+ +E+ LA+ IL+G + G VT+D ++G
Sbjct: 823 QEIENPLAQQILSGKLIPGVPVTLDVENG 851
>gi|355676751|ref|ZP_09060247.1| hypothetical protein HMPREF9469_03284 [Clostridium citroniae
WAL-17108]
gi|354813340|gb|EHE97951.1| hypothetical protein HMPREF9469_03284 [Clostridium citroniae
WAL-17108]
Length = 850
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 160/304 (52%), Positives = 208/304 (68%), Gaps = 18/304 (5%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R RVG++DP RPI SFLF GPTGVGKTEL+ AL+ FG++ A++R+DMSEYMEKH+
Sbjct: 529 AIRRGRVGLKDPGRPIGSFLFLGPTGVGKTELSKALSEAMFGTENALIRVDMSEYMEKHS 588
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG++ GGQL+E VR P+SVILFDEIEKAH DV N++LQ+LDDG +TD
Sbjct: 589 VSKMIGSPPGYVGYDEGGQLSEKVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDA 648
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----SDQ------MERGVAEELRRRFRPEF 171
+G+ +D KNTIIIMTSN G I LG SD M+ V +E++R F+PEF
Sbjct: 649 QGRKIDFKNTIIIMTSNAGAENIISPKRLGFGAASDAKADYTFMKERVMDEVKRLFKPEF 708
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAK-NMELTVTHTFKKKLIEEGYNPSY 230
LNRIDE+IVF QL+K + I DIML I +R + + +ELTVT ++ LI++GY+ Y
Sbjct: 709 LNRIDEIIVFHQLSKDHIKGIADIMLSTIGKRSKDQLGIELTVTDEAREYLIDKGYDEKY 768
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD-------SGGNVIMYRHRNGSMT 283
GARPLRR I L+ED +AE +L G I+ GD+V + D S R +G+ T
Sbjct: 769 GARPLRRTIQNLVEDKMAEEMLDGSIKAGDTVQVGFDGEKLTFTSKSKAAPKRRTSGTKT 828
Query: 284 VCAR 287
A+
Sbjct: 829 EAAK 832
>gi|428301253|ref|YP_007139559.1| ATP-dependent chaperone ClpB [Calothrix sp. PCC 6303]
gi|428237797|gb|AFZ03587.1| ATP-dependent chaperone ClpB [Calothrix sp. PCC 6303]
Length = 872
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 152/271 (56%), Positives = 192/271 (70%), Gaps = 6/271 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRPI+SF+F GPTGVGKTELA ALA F + EAMVRIDMSEYMEKH
Sbjct: 589 AIQRSRAGLADPNRPIASFIFLGPTGVGKTELAKALAAYLFDTDEAMVRIDMSEYMEKHA 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTEA+R RP++V+LFDEIEKAH DV N+ LQ+LDDGRVTD
Sbjct: 649 VSRLIGAPPGYVGYDEGGQLTEAIRRRPYTVVLFDEIEKAHPDVFNIFLQILDDGRVTDA 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQ----MERGVAEELRRRFRPEFLNRIDE 177
+G+T+D KNTIIIMTSNIG I + G D M V E +R FRPEFLNR+DE
Sbjct: 709 QGRTIDFKNTIIIMTSNIGSQYIL--DVAGDDSNYDDMRFRVTEAMRNAFRPEFLNRVDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
I+F L K +L IV + + + RL + M L V+ T L E GY+P YGARPL+R
Sbjct: 767 QIIFHTLQKSELRNIVQLQINRLRNRLSDRKMSLKVSDTALDFLAEVGYDPVYGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDS 268
AI R LE +A+ IL G G+++ +D ++
Sbjct: 827 AIQRELETQIAKRILRGEFSDGNTIFVDVEN 857
>gi|452972567|gb|EME72396.1| ATP-dependent Clp protease ClpC [Bacillus sonorensis L12]
Length = 810
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 148/274 (54%), Positives = 199/274 (72%), Gaps = 9/274 (3%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTGVGKTELA ALA FG +EAM+RIDMSEYMEKH+ S+ GS
Sbjct: 530 GLKDPKRPIGSFIFLGPTGVGKTELARALAESIFGDEEAMIRIDMSEYMEKHSTSRLVGS 589
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG++ GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+L+DGR+TD KG+TVD
Sbjct: 590 PPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDF 649
Query: 129 KNTIIIMTSNIGDSVIARESILGSD---------QMERGVAEELRRRFRPEFLNRIDEVI 179
+NTI+IMTSN+G S + R +G + M+ V EL+R FRPEF+NRIDE+I
Sbjct: 650 RNTILIMTSNVGASELRRNKYVGFNVQDETQNYKDMKDKVMGELKRAFRPEFINRIDEII 709
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF L K L +IV +M ++ +RL+ +++ + +T K+K+ EEG + YGARPLRRAI
Sbjct: 710 VFHSLEKKHLKDIVSLMSDQLTKRLKEQDLSIELTEAAKEKIAEEGVDLEYGARPLRRAI 769
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
+ +ED L+E +L G I G + +D ++G V+
Sbjct: 770 QKHVEDRLSEELLKGNITKGQHIVLDVENGEFVV 803
>gi|354585457|ref|ZP_09004344.1| ATPase AAA-2 domain protein [Paenibacillus lactis 154]
gi|353188726|gb|EHB54246.1| ATPase AAA-2 domain protein [Paenibacillus lactis 154]
Length = 818
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 146/275 (53%), Positives = 201/275 (73%), Gaps = 10/275 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RP+ SF+F GPTGVGKTELA ALA FG + A+VRIDMSEYMEKH+ ++
Sbjct: 526 RARAGLKDPKRPMGSFIFLGPTGVGKTELARALAEAMFGDENAVVRIDMSEYMEKHSTAR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E GGQLTE VR +P+SV+L DEIEKAH +V N++LQ+L+DGR+TD KG+
Sbjct: 586 LVGAPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEFLNR 174
VD +NT+II+TSN+G I R S LG + M+ V +EL++ FRPEFLNR
Sbjct: 646 VVDFRNTLIILTSNVGAEAIKRNSTLGFTAVTDAGRDYNNMKTKVMDELKKSFRPEFLNR 705
Query: 175 IDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARP 234
IDE+IVF L + + EIV +M E+ +RL ++E +T K + +EGY+P++GARP
Sbjct: 706 IDEIIVFHSLEEKHIAEIVTLMSDELRKRLREFDVEFELTDQAKAFIAKEGYDPAFGARP 765
Query: 235 LRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
LRRAI + +ED L+E +L G ++ GD++ +D ++G
Sbjct: 766 LRRAIQKHIEDRLSEELLKGNVKKGDALIIDEENG 800
>gi|333925693|ref|YP_004499272.1| ATP-dependent chaperone ClpB [Serratia sp. AS12]
gi|333930646|ref|YP_004504224.1| ATP-dependent chaperone ClpB [Serratia plymuthica AS9]
gi|386327517|ref|YP_006023687.1| ATP-dependent chaperone ClpB [Serratia sp. AS13]
gi|421781776|ref|ZP_16218240.1| ATP-dependent chaperone protein ClpB [Serratia plymuthica A30]
gi|333472253|gb|AEF43963.1| ATP-dependent chaperone ClpB [Serratia plymuthica AS9]
gi|333489753|gb|AEF48915.1| ATP-dependent chaperone ClpB [Serratia sp. AS12]
gi|333959850|gb|AEG26623.1| ATP-dependent chaperone ClpB [Serratia sp. AS13]
gi|407756109|gb|EKF66228.1| ATP-dependent chaperone protein ClpB [Serratia plymuthica A30]
Length = 857
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 149/268 (55%), Positives = 195/268 (72%), Gaps = 1/268 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F S +AMVRIDMSE+MEKH+
Sbjct: 583 AIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALASFLFDSDDAMVRIDMSEFMEKHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARE-SILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT++IMTSN+G +I + QM+ V E + FRPEF+NRIDEV+V
Sbjct: 703 QGRTVDFRNTVVIMTSNLGSDLIQEHFGQMNYAQMKESVMEMVTHHFRPEFINRIDEVVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L + + EI I L +Y+RLE + E+T+T L + GY+P YGARPL+RAI
Sbjct: 763 FHPLGQKHIAEIAKIQLARLYKRLEERGYEVTMTEPALALLGQTGYDPVYGARPLKRAIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDS 268
+ +E+ LA+ IL+G + G VT+D ++
Sbjct: 823 QEIENPLAQQILSGKLIPGKLVTLDVEN 850
>gi|170289227|ref|YP_001739465.1| ATPase [Thermotoga sp. RQ2]
gi|170176730|gb|ACB09782.1| ATPase AAA-2 domain protein [Thermotoga sp. RQ2]
Length = 791
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 152/269 (56%), Positives = 197/269 (73%), Gaps = 3/269 (1%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
T+ RARVGI++P RPI FLF GPTGVGKTELA LA FGS++AM+R+DMSEYMEKH+
Sbjct: 520 TIRRARVGIKNPRRPIGVFLFLGPTGVGKTELARTLADVLFGSEDAMIRLDMSEYMEKHS 579
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG+E GGQLTEAVR RP+SVIL DEIEKAH DV N++LQ+ +DGR+TDG
Sbjct: 580 VARLIGAPPGYVGYEEGGQLTEAVRKRPYSVILLDEIEKAHPDVFNILLQVFEDGRLTDG 639
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVF 181
KG TVD +NTIIIMTSNIG I + + + + +ELR F+PEFLNRID ++ F
Sbjct: 640 KGNTVDFRNTIIIMTSNIGSEKILE---MSENSVRIEIEKELRNTFKPEFLNRIDAIVYF 696
Query: 182 RQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGR 241
+ L ++ +IV+IM++++ E L+ KN+ + +T K+ L E GY PS GARPLRR I
Sbjct: 697 KPLTMEEVKKIVEIMVRQLQEILKEKNISIELTERAKEYLAEAGYVPSLGARPLRRIIEL 756
Query: 242 LLEDNLAEIILTGYIQVGDSVTMDCDSGG 270
LE +A+ IL G I+ GD V +D D G
Sbjct: 757 ELESMIADKILEGEIKEGDRVLVDADEYG 785
>gi|51894268|ref|YP_076959.1| class III stress response-related ATPase [Symbiobacterium
thermophilum IAM 14863]
gi|51857957|dbj|BAD42115.1| class III stress response-related ATPase [Symbiobacterium
thermophilum IAM 14863]
Length = 833
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 150/286 (52%), Positives = 205/286 (71%), Gaps = 10/286 (3%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTG GKT LA ALA FG ++AMVRIDMSEYME+HT S+ G+
Sbjct: 538 GLKDPKRPIGSFIFLGPTGTGKTHLAKALAEALFGDEDAMVRIDMSEYMERHTTSRLVGA 597
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG+E GGQLTEAVR RP+ V+L DEIEKAH +V N++LQ+L+DGR+T+ KG+TVD
Sbjct: 598 PPGYVGYEEGGQLTEAVRRRPYCVVLLDEIEKAHPEVFNILLQVLEDGRLTEAKGRTVDF 657
Query: 129 KNTIIIMTSNIGDSVIARESILG----SDQMER------GVAEELRRRFRPEFLNRIDEV 178
+NT+IIMTSN G I + LG D+ ER V +E++R FRPEFLNR+DE+
Sbjct: 658 RNTVIIMTSNAGAQAIQGDKKLGFTVQEDEKERYERMKSRVMDEVKRLFRPEFLNRLDEI 717
Query: 179 IVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRA 238
I+F L K L EIV + +K++ +RL+ + +ELT++ + +KL+ EGY+ +GARPLRRA
Sbjct: 718 IIFHSLTKDHLKEIVRLEVKKVADRLKEQGVELTLSDSALEKLVAEGYDEKFGARPLRRA 777
Query: 239 IGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMTV 284
I RL+ED L+E +L + G+ V +D D+ G ++ R + +V
Sbjct: 778 IQRLVEDPLSEEMLRQPFKYGEQVYVDTDAEGKIVFKRTEPSAESV 823
>gi|422022041|ref|ZP_16368550.1| protein disaggregation chaperone [Providencia sneebia DSM 19967]
gi|414097791|gb|EKT59444.1| protein disaggregation chaperone [Providencia sneebia DSM 19967]
Length = 857
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 151/269 (56%), Positives = 199/269 (73%), Gaps = 3/269 (1%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F S +AM+RIDMSE+MEKH
Sbjct: 583 AIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDAMIRIDMSEFMEKHA 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG+E GG LTEAVR RP+SVILFDEIEKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILFDEIEKAHPDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESI--LGSDQMERGVAEELRRRFRPEFLNRIDEVI 179
+G+TVD +NT+IIMTSN+G +I +ES + +M+ V E L R FRPEF+NRIDEV+
Sbjct: 703 QGRTVDFRNTVIIMTSNLGSDLI-QESFGRISYPEMKDMVMEVLTRSFRPEFINRIDEVV 761
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF L+K + I +I L +Y+RLE E++ T +K+ E GY+P +GARPL+RAI
Sbjct: 762 VFHPLDKANIANIANIQLSRLYKRLEEHGYEVSATPAALEKIGEAGYDPIFGARPLKRAI 821
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDS 268
+ +E+ LA+ IL+G + G V +D ++
Sbjct: 822 QQEIENPLAQEILSGKLIPGKPVVLDVEN 850
>gi|413937085|gb|AFW71636.1| hypothetical protein ZEAMMB73_446197 [Zea mays]
Length = 947
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 151/284 (53%), Positives = 204/284 (71%), Gaps = 11/284 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+RVG+ DP+RPI++ LF GPTGVGKTEL ALA YFGS+ AM+R+DMSEYME+HT
Sbjct: 647 AVKRSRVGLNDPDRPIATLLFCGPTGVGKTELTKALAASYFGSESAMLRLDMSEYMERHT 706
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGY+G+ G LTEAVR +P +V+L DEIEKAH D+ N++LQ+ +DG +TD
Sbjct: 707 VSKLIGSPPGYIGYGETGTLTEAVRRKPFTVVLLDEIEKAHPDIFNILLQIFEDGHLTDS 766
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA--RESI--LGSD-------QMERGVAEELRRRFRPE 170
+G+ V KNT+I+MTSN+G + I+ R+SI L D M+ V EEL+ FRPE
Sbjct: 767 QGRRVSFKNTLIVMTSNVGSTSISKGRQSIGFLKEDTESGSYFAMKSLVMEELKAFFRPE 826
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
LNRIDE++VFR L K Q++ I+DI+LKE+ RL A + L V+ K + +EGY+ SY
Sbjct: 827 LLNRIDEMVVFRPLEKTQMLAILDIILKEVKGRLLALGIGLEVSDAMKDLICQEGYDKSY 886
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
GARPLRRA+ ++ED ++E IL G + GD++ MD D+ G M
Sbjct: 887 GARPLRRAVTHIIEDVISEAILFGEFKPGDTILMDIDAEGKPCM 930
>gi|321313756|ref|YP_004206043.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus subtilis BSn5]
gi|320020030|gb|ADV95016.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus subtilis BSn5]
Length = 810
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 148/274 (54%), Positives = 196/274 (71%), Gaps = 9/274 (3%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTGVGKTELA ALA FG +E+M+RIDMSEYMEKH+ S+ GS
Sbjct: 530 GLKDPKRPIGSFIFLGPTGVGKTELARALAESIFGDEESMIRIDMSEYMEKHSTSRLVGS 589
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG++ GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+L+DGR+TD KG+TVD
Sbjct: 590 PPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDF 649
Query: 129 KNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFLNRIDEVI 179
+NTI+IMTSN+G S + R +G M+ V EL+R FRPEF+NRIDE+I
Sbjct: 650 RNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEII 709
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF L K L EIV +M ++ +RL+ +++ + +T K K+ EEG + YGARPLRRAI
Sbjct: 710 VFHSLEKKHLTEIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAI 769
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
+ +ED L+E +L G I G + +D + G V+
Sbjct: 770 QKHVEDRLSEELLRGNIHKGQHIVLDVEDGEFVV 803
>gi|312143562|ref|YP_003995008.1| ATP-dependent chaperone ClpB [Halanaerobium hydrogeniformans]
gi|311904213|gb|ADQ14654.1| ATP-dependent chaperone ClpB [Halanaerobium hydrogeniformans]
Length = 860
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 144/268 (53%), Positives = 196/268 (73%), Gaps = 2/268 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G++D +RP++SFLF GPTGVGKTELA LA F ++A++R+DMSEYME+H
Sbjct: 589 AIRRSRTGLQDADRPLASFLFMGPTGVGKTELAKTLAAYLFDDEKALIRLDMSEYMERHA 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGFE GGQLTE VR +P+SVILFDEIEKAH+DV N++LQ+LDDG +TD
Sbjct: 649 VSKLIGSPPGYVGFEEGGQLTEKVRRKPYSVILFDEIEKAHQDVFNILLQILDDGVLTDS 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVF 181
+G+ VD KNT+IIMTSNIG I + ++ + + L+ FRPEFLNRIDE I+F
Sbjct: 709 QGKEVDFKNTVIIMTSNIGSQFIM--DLQEKSEIREKIEQSLKSHFRPEFLNRIDEKIIF 766
Query: 182 RQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGR 241
L+K L +I+DI + + + L K++E+ +T K++L+E GY+P+YGARPLRR I
Sbjct: 767 NSLSKENLFDIIDIQISYLQQNLADKDIEIELTKNAKEELLEIGYDPAYGARPLRRVIQS 826
Query: 242 LLEDNLAEIILTGYIQVGDSVTMDCDSG 269
++D LA +L G I+ GD +T+D + G
Sbjct: 827 QIKDELAMALLEGKIEEGDIITVDFEDG 854
>gi|384173746|ref|YP_005555131.1| Negative regulator of genetic competence ClpC/MecB [Bacillus
subtilis subsp. subtilis str. RO-NN-1]
gi|386756665|ref|YP_006229881.1| ATPase AAA-2 domain-containing protein [Bacillus sp. JS]
gi|428277501|ref|YP_005559236.1| class III stress response-related ATPase [Bacillus subtilis subsp.
natto BEST195]
gi|430755612|ref|YP_007211173.1| ATP-dependent Clp protease ClpC [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|449092799|ref|YP_007425290.1| class III stress response-related ATPase, AAA+ superfamily
[Bacillus subtilis XF-1]
gi|291482458|dbj|BAI83533.1| class III stress response-related ATPase [Bacillus subtilis subsp.
natto BEST195]
gi|349592970|gb|AEP89157.1| Negative regulator of genetic competence ClpC/MecB [Bacillus
subtilis subsp. subtilis str. RO-NN-1]
gi|384929947|gb|AFI26625.1| ATPase AAA-2 domain-containing protein [Bacillus sp. JS]
gi|430020132|gb|AGA20738.1| ATP-dependent Clp protease ClpC [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|449026714|gb|AGE61953.1| class III stress response-related ATPase, AAA+ superfamily
[Bacillus subtilis XF-1]
Length = 810
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 148/274 (54%), Positives = 196/274 (71%), Gaps = 9/274 (3%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTGVGKTELA ALA FG +E+M+RIDMSEYMEKH+ S+ GS
Sbjct: 530 GLKDPKRPIGSFIFLGPTGVGKTELARALAESIFGDEESMIRIDMSEYMEKHSTSRLVGS 589
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG++ GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+L+DGR+TD KG+TVD
Sbjct: 590 PPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDF 649
Query: 129 KNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFLNRIDEVI 179
+NTI+IMTSN+G S + R +G M+ V EL+R FRPEF+NRIDE+I
Sbjct: 650 RNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEII 709
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF L K L EIV +M ++ +RL+ +++ + +T K K+ EEG + YGARPLRRAI
Sbjct: 710 VFHSLEKKHLTEIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAI 769
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
+ +ED L+E +L G I G + +D + G V+
Sbjct: 770 QKHVEDRLSEELLRGNIHKGQHIVLDVEDGEFVV 803
>gi|300867974|ref|ZP_07112613.1| ATPase AAA-2 [Oscillatoria sp. PCC 6506]
gi|300333995|emb|CBN57791.1| ATPase AAA-2 [Oscillatoria sp. PCC 6506]
Length = 870
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 149/268 (55%), Positives = 197/268 (73%), Gaps = 3/268 (1%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRP++SF+F GPTGVGKTELA ALA F +++AMVRIDMSEYMEKH
Sbjct: 589 AIQRSRAGLADPNRPVASFIFLGPTGVGKTELAKALAAYLFDTEDAMVRIDMSEYMEKHA 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTEA+R RP++VILFDEIEKAH DV N+MLQ+LDDGRVTD
Sbjct: 649 VSRLIGAPPGYVGYDEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNIMLQILDDGRVTDA 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD-QMERGVAEELRRRFRPEFLNRIDEVIV 180
+G TVD KN +IIMTSN+G I + G D +M V E +R FRPEFLNRIDE I+
Sbjct: 709 QGHTVDFKNAVIIMTSNVGSQYIL--DVGGDDEEMRSRVMEAMRGTFRPEFLNRIDETII 766
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F+ L+K +L +IV + + + +RL + M + ++ + L E GY+P YGARPL+RAI
Sbjct: 767 FQGLSKQELRQIVKLQIGRLDKRLADRKMSIKLSDSALDFLAEVGYDPVYGARPLKRAIQ 826
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDS 268
R LE +A+ IL G GD++ +D ++
Sbjct: 827 RELETQIAKSILRGDFSDGDTIFVDIEN 854
>gi|443474687|ref|ZP_21064658.1| ATP-dependent chaperone ClpB [Pseudanabaena biceps PCC 7429]
gi|443020577|gb|ELS34522.1| ATP-dependent chaperone ClpB [Pseudanabaena biceps PCC 7429]
Length = 872
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 152/271 (56%), Positives = 195/271 (71%), Gaps = 6/271 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRPI+SF+F GPTGVGKTELA ALA F ++E+MVRIDMSEYMEKH+
Sbjct: 589 AIQRSRAGLADPNRPIASFIFLGPTGVGKTELAKALAAYLFDTEESMVRIDMSEYMEKHS 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEAVR RP++VILFDEIEKAH DV N+MLQ+LDDGRVTD
Sbjct: 649 VSRLVGAPPGYVGYEEGGQLTEAVRRRPYAVILFDEIEKAHPDVFNIMLQILDDGRVTDS 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD----QMERGVAEELRRRFRPEFLNRIDE 177
+G+TVD KN IIIMTSN+G I I G D +M V E +R FRPEFLNRIDE
Sbjct: 709 QGRTVDFKNAIIIMTSNVGSQYIL--DIAGDDSRYEEMRERVMESMRASFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+++F L + +L IV + ++ + +RL + M L + L E GY+P YGARPL+R
Sbjct: 767 IVIFHALRRDELRRIVKLQVQRLEKRLSDRRMTLKIADVALDFLAEVGYDPVYGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDS 268
I R LE +A+ IL G GD++ +D ++
Sbjct: 827 IIQRQLETKIAKGILRGEFTDGDTIFVDIEN 857
>gi|293333298|ref|NP_001169769.1| uncharacterized protein LOC100383653 [Zea mays]
gi|224031561|gb|ACN34856.1| unknown [Zea mays]
Length = 433
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 151/284 (53%), Positives = 204/284 (71%), Gaps = 11/284 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+RVG+ DP+RPI++ LF GPTGVGKTEL ALA YFGS+ AM+R+DMSEYME+HT
Sbjct: 133 AVKRSRVGLNDPDRPIATLLFCGPTGVGKTELTKALAASYFGSESAMLRLDMSEYMERHT 192
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGY+G+ G LTEAVR +P +V+L DEIEKAH D+ N++LQ+ +DG +TD
Sbjct: 193 VSKLIGSPPGYIGYGETGTLTEAVRRKPFTVVLLDEIEKAHPDIFNILLQIFEDGHLTDS 252
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA--RESI--LGSD-------QMERGVAEELRRRFRPE 170
+G+ V KNT+I+MTSN+G + I+ R+SI L D M+ V EEL+ FRPE
Sbjct: 253 QGRRVSFKNTLIVMTSNVGSTSISKGRQSIGFLKEDTESGSYFAMKSLVMEELKAFFRPE 312
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
LNRIDE++VFR L K Q++ I+DI+LKE+ RL A + L V+ K + +EGY+ SY
Sbjct: 313 LLNRIDEMVVFRPLEKTQMLAILDIILKEVKGRLLALGIGLEVSDAMKDLICQEGYDKSY 372
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
GARPLRRA+ ++ED ++E IL G + GD++ MD D+ G M
Sbjct: 373 GARPLRRAVTHIIEDVISEAILFGEFKPGDTILMDIDAEGKPCM 416
>gi|114567873|ref|YP_755027.1| ATPase [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
gi|114338808|gb|ABI69656.1| ATPases with chaperone activity, ATP-binding subunit
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
Length = 828
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 142/278 (51%), Positives = 206/278 (74%), Gaps = 10/278 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G+++P RPI SF+F GPTGVGKTELA +LA FGS++A++R+DMSEYMEKH
Sbjct: 541 AVRRARAGLKNPKRPIGSFVFLGPTGVGKTELARSLAEAMFGSEDAIIRLDMSEYMEKHA 600
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ GSPPGYVG++ GGQLTE VR +P+SVIL DEIEKAH DV N++LQ+++DGR+TDG
Sbjct: 601 VSRMIGSPPGYVGYDEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVMEDGRLTDG 660
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
+G+TVD +NT++IMTSN+G I +G QM+ V E+L+ F+PEF
Sbjct: 661 QGRTVDFRNTVVIMTSNVGADSIKNSKKVGFTRAIDEAHDYSQMKERVMEQLKHTFKPEF 720
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
+NRIDE+IVF+ LN+ +L EIVD++L ++ ER++ + ++ ++ +++EGY+P++G
Sbjct: 721 MNRIDEIIVFQNLNEQELKEIVDLLLLDLKERVKENGYGMEISPAARELILKEGYDPAFG 780
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
ARPL+RAI +L+ED+++E IL + GD + +D G
Sbjct: 781 ARPLKRAIQKLVEDSISEEILKKNLLPGDKILVDAVEG 818
>gi|16077154|ref|NP_387967.1| class III stress response-related ATPase [Bacillus subtilis subsp.
subtilis str. 168]
gi|221307897|ref|ZP_03589744.1| class III stress response-related ATPase [Bacillus subtilis subsp.
subtilis str. 168]
gi|221312218|ref|ZP_03594023.1| class III stress response-related ATPase [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221317152|ref|ZP_03598446.1| class III stress response-related ATPase [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221321415|ref|ZP_03602709.1| class III stress response-related ATPase [Bacillus subtilis subsp.
subtilis str. SMY]
gi|402774329|ref|YP_006628273.1| class III stress response-related ATPase [Bacillus subtilis QB928]
gi|418034764|ref|ZP_12673233.1| class III stress response-related ATPase [Bacillus subtilis subsp.
subtilis str. SC-8]
gi|452916619|ref|ZP_21965241.1| negative regulator of genetic competence ClpC/MecB [Bacillus
subtilis MB73/2]
gi|586900|sp|P37571.1|CLPC_BACSU RecName: Full=Negative regulator of genetic competence ClpC/MecB
gi|442360|gb|AAA19233.1| ClpC adenosine triphosphatase [Bacillus subtilis]
gi|467474|dbj|BAA05320.1| clpA/clpB family [Bacillus subtilis]
gi|2632353|emb|CAB11862.1| class III stress response-related ATPase, AAA+ superfamily
[Bacillus subtilis subsp. subtilis str. 168]
gi|351468418|gb|EHA28638.1| class III stress response-related ATPase [Bacillus subtilis subsp.
subtilis str. SC-8]
gi|402479515|gb|AFQ56024.1| Class III stress response-related ATPase, AAA+superfamily [Bacillus
subtilis QB928]
gi|407955777|dbj|BAM49017.1| class III stress response-related ATPase [Bacillus subtilis
BEST7613]
gi|407963048|dbj|BAM56287.1| class III stress response-related ATPase [Bacillus subtilis
BEST7003]
gi|452114528|gb|EME04928.1| negative regulator of genetic competence ClpC/MecB [Bacillus
subtilis MB73/2]
Length = 810
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 148/274 (54%), Positives = 196/274 (71%), Gaps = 9/274 (3%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTGVGKTELA ALA FG +E+M+RIDMSEYMEKH+ S+ GS
Sbjct: 530 GLKDPKRPIGSFIFLGPTGVGKTELARALAESIFGDEESMIRIDMSEYMEKHSTSRLVGS 589
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG++ GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+L+DGR+TD KG+TVD
Sbjct: 590 PPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDF 649
Query: 129 KNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFLNRIDEVI 179
+NTI+IMTSN+G S + R +G M+ V EL+R FRPEF+NRIDE+I
Sbjct: 650 RNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEII 709
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF L K L EIV +M ++ +RL+ +++ + +T K K+ EEG + YGARPLRRAI
Sbjct: 710 VFHSLEKKHLTEIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAI 769
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
+ +ED L+E +L G I G + +D + G V+
Sbjct: 770 QKHVEDRLSEELLRGNIHKGQHIVLDVEDGEFVV 803
>gi|37525237|ref|NP_928581.1| protein disaggregation chaperone [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|54035796|sp|Q7N788.1|CLPB_PHOLL RecName: Full=Chaperone protein ClpB
gi|36784664|emb|CAE13564.1| heat shock protein F84.1 [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 857
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 149/268 (55%), Positives = 196/268 (73%), Gaps = 1/268 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F S +AMVRIDMSE+MEKH
Sbjct: 583 AIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFLFDSDDAMVRIDMSEFMEKHA 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHSDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA-RESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT++IMTSN+G +I R L D+M+ V + FRPEF+NRIDE +V
Sbjct: 703 QGRTVDFRNTVVIMTSNLGSDMIQERFGSLNYDEMKDIVMGIVSHNFRPEFINRIDEAVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L + L I DI L+ +Y+RLE + ++T+T + L E G++P YGARPL+RAI
Sbjct: 763 FHPLGRRHLSAIADIQLQRLYKRLEERGYQVTITQQALEILAEAGFDPVYGARPLKRAIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDS 268
+ +E+ LA+ IL+G + G VT+D ++
Sbjct: 823 QEIENPLAQKILSGQLLPGKPVTLDVEN 850
>gi|357163239|ref|XP_003579667.1| PREDICTED: chaperone protein ClpD2, chloroplastic-like
[Brachypodium distachyon]
Length = 942
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 150/287 (52%), Positives = 204/287 (71%), Gaps = 12/287 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+RVG+ DPNRPI++ LF GPTGVGKTEL ALA YFGS+ +MVR+DMSEYME+H
Sbjct: 641 AVKRSRVGMSDPNRPIATLLFCGPTGVGKTELTKALAAIYFGSESSMVRLDMSEYMERHA 700
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGY+GF GG LTEAVR +P +V+L DEIEKAH D+ N++LQ+ +DG +TD
Sbjct: 701 VSKLIGSPPGYMGFGEGGTLTEAVRRKPFTVVLLDEIEKAHPDIFNILLQVFEDGHLTDS 760
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA--RESILGSDQ----------MERGVAEELRRRFRP 169
+G+ V KNT+I+MTSN+G + I+ R SI Q M+ V EEL+ FRP
Sbjct: 761 QGRRVSFKNTLIVMTSNVGSASISKGRMSIGFQTQNDTEENTYNVMKSLVTEELKAFFRP 820
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
E LNR+DEV+VFR L K Q++ I++I+L+E+ RL A + L ++ K + +EGY+ S
Sbjct: 821 ELLNRMDEVVVFRPLEKTQMLAILNIILQEVKGRLLALGIGLQISDAMKNVISQEGYDKS 880
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYR 276
YGARPLRRA+ +L+ED ++E IL+G + GD++ MD D G + R
Sbjct: 881 YGARPLRRAVTQLVEDAISEGILSGQYKPGDTIMMDADDKGKPCLSR 927
>gi|326203327|ref|ZP_08193192.1| ATPase AAA-2 domain protein [Clostridium papyrosolvens DSM 2782]
gi|325986585|gb|EGD47416.1| ATPase AAA-2 domain protein [Clostridium papyrosolvens DSM 2782]
Length = 810
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 148/286 (51%), Positives = 204/286 (71%), Gaps = 12/286 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R RVG++DP RP+ SF+F GPTGVGKTEL ALA FG +++M+R+DMSE+MEKH+
Sbjct: 525 AIRRGRVGLKDPKRPVGSFIFMGPTGVGKTELCKALAEAMFGDEKSMIRVDMSEFMEKHS 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG++ GGQLTE VR RP+SV+LFDEIEKAH D+ N++LQ+L+DGR+TD
Sbjct: 585 VSKLVGSPPGYVGYDEGGQLTERVRRRPYSVLLFDEIEKAHPDIFNILLQILEDGRLTDS 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG-----------SDQMERGVAEELRRRFRPE 170
+G+ VD +NTIIIMTSN+G I LG + M+ V EL++ FRPE
Sbjct: 645 QGRVVDFRNTIIIMTSNVGARTITEPKRLGFSTSNDESAKNYEDMKNNVMGELKKMFRPE 704
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNRID++IVF L+K + EIV +ML + RL+A + + V+ L ++G++P +
Sbjct: 705 FLNRIDDIIVFHPLSKENIKEIVRLMLDVLVNRLKANEIAMEVSEEAMGHLAQKGFDPVF 764
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYR 276
GARPLRRAI ++ED LAE +L G ++ GDS+ +D D G N+++ +
Sbjct: 765 GARPLRRAIQSMVEDKLAEDMLEGKVKAGDSIRIDFD-GENIVINK 809
>gi|363899121|ref|ZP_09325632.1| hypothetical protein HMPREF9625_00292 [Oribacterium sp. ACB1]
gi|395209294|ref|ZP_10398388.1| negative regulator of genetic competence ClpC/MecB [Oribacterium
sp. ACB8]
gi|361959451|gb|EHL12738.1| hypothetical protein HMPREF9625_00292 [Oribacterium sp. ACB1]
gi|394704925|gb|EJF12454.1| negative regulator of genetic competence ClpC/MecB [Oribacterium
sp. ACB8]
Length = 818
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 151/281 (53%), Positives = 202/281 (71%), Gaps = 12/281 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R RVG++DP RPI SF+F GPTGVGKTEL+ ALA FGS++ ++R+DMSEYMEK++
Sbjct: 526 AIKRGRVGLKDPKRPIGSFMFLGPTGVGKTELSKALAEVVFGSEQNLIRVDMSEYMEKYS 585
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG++ GGQL+E VR P+SVILFDEIEKAH DVLN++LQ+LDDG +TD
Sbjct: 586 VSKMIGSPPGYVGYDEGGQLSEKVRRNPYSVILFDEIEKAHPDVLNILLQVLDDGHITDS 645
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQ-----------MERGVAEELRRRFRPE 170
+G+ V KNTIIIMTSN+G I LG D M+ V EEL+R F+PE
Sbjct: 646 QGRKVSFKNTIIIMTSNVGAEQIMSPKKLGFDSPAGQGDGDYNYMKNKVLEELKRLFKPE 705
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAK-NMELTVTHTFKKKLIEEGYNPS 229
FLNRIDE+IVFR ++K + +I+DI+LK +Y+R + + N+ + + K LIE+GY+P
Sbjct: 706 FLNRIDEIIVFRPISKEDMSKILDILLKNLYKRAKGEMNLGINLDKKAKTFLIEKGYDPK 765
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGG 270
+GARPL+R I +E+ L+E IL G +Q G+ V + D G
Sbjct: 766 FGARPLKRTIQTEVENLLSEAILDGDVQAGERVNLRVDKNG 806
>gi|427723066|ref|YP_007070343.1| ATP-dependent chaperone ClpB [Leptolyngbya sp. PCC 7376]
gi|427354786|gb|AFY37509.1| ATP-dependent chaperone ClpB [Leptolyngbya sp. PCC 7376]
Length = 1051
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 148/260 (56%), Positives = 193/260 (74%), Gaps = 2/260 (0%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP+RPI SF+F GPTGVGKTELA ALA F S+EAMVRIDMSEYMEKH VS+ G+
Sbjct: 615 GMKDPSRPIGSFMFMGPTGVGKTELARALAAFLFDSEEAMVRIDMSEYMEKHAVSRLIGA 674
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG+E GGQL+EAVR RP+SV+L DE+EKAH+DV N++LQ+LDDGR+TD +G+TVD
Sbjct: 675 PPGYVGYEEGGQLSEAVRRRPYSVVLLDEVEKAHKDVFNILLQVLDDGRITDSQGRTVDF 734
Query: 129 KNTIIIMTSNIGDSVIARESILGS--DQMERGVAEELRRRFRPEFLNRIDEVIVFRQLNK 186
+NTII+MTSN+G I S + DQM++ V LR+RFRPEFLNRIDE+I+F L +
Sbjct: 735 RNTIIVMTSNVGSEFILNLSGDDTKYDQMQQKVTGSLRKRFRPEFLNRIDELIIFHTLMR 794
Query: 187 MQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGRLLEDN 246
+L EIV + +K I + L + + LT+T ++E GY P++GARPL+RAI R LE+
Sbjct: 795 DELKEIVKLQIKRIEKLLADQKIALTLTDAALDHVVEAGYEPTFGARPLKRAIQRELENP 854
Query: 247 LAEIILTGYIQVGDSVTMDC 266
++ IL GD + DC
Sbjct: 855 ISTKILEADFTDGDRIIADC 874
>gi|412988426|emb|CCO17762.1| ClpC [Bathycoccus prasinos]
Length = 1022
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 148/283 (52%), Positives = 204/283 (72%), Gaps = 16/283 (5%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+L RAR G+ + NRPI+S +F GPTGVGKTEL ALA EYFG +E+M+R+DMSEYME+HT
Sbjct: 684 SLRRARCGLANENRPIASMMFAGPTGVGKTELTKALAKEYFGDEESMIRLDMSEYMERHT 743
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK G+PPGYVGF+ GGQLTEAVR RP SV+LFDEIEKAH DV NVMLQ+L+DGR+TD
Sbjct: 744 VSKLIGAPPGYVGFDGGGQLTEAVRKRPFSVVLFDEIEKAHPDVFNVMLQMLEDGRLTDS 803
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARE--SILGSD--------------QMERGVAEELRR 165
KG+ +NTIII+TSN+G VI++ LG D M V +E++
Sbjct: 804 KGRVTSFRNTIIIITSNVGSQVISKNGGGGLGFDLSAFEENPGEAAYNTMRDKVLDEMKN 863
Query: 166 RFRPEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEG 225
FRPEFLNR+DE++V+RQL++ + +I +ML E RL +N+ L +T + L +EG
Sbjct: 864 HFRPEFLNRLDEIVVYRQLDQEDVSKISALMLNETGSRLHERNIGLALTESVMAHLQKEG 923
Query: 226 YNPSYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDS 268
++ ++GARP+RRA+ ++++DN+AE +LTG I G++ +D ++
Sbjct: 924 FDQAWGARPMRRAVQQIIDDNVAEAVLTGEIGEGETALVDFNA 966
>gi|381184365|ref|ZP_09892990.1| ClpC ATPase [Listeriaceae bacterium TTU M1-001]
gi|380315745|gb|EIA19239.1| ClpC ATPase [Listeriaceae bacterium TTU M1-001]
Length = 820
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 144/278 (51%), Positives = 200/278 (71%), Gaps = 9/278 (3%)
Query: 1 MTLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKH 60
+ + RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+R+DMSEYMEK
Sbjct: 521 LAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDEDAMIRVDMSEYMEKF 580
Query: 61 TVSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTD 120
+ ++ G+PPGYVG+E GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 581 STARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEIEKAHPDVFNMLLQVLDDGRLTD 640
Query: 121 GKGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEF 171
KG+ VD +NT+IIMTSNIG + + +G ME V +EL++ FRPEF
Sbjct: 641 SKGRVVDFRNTVIIMTSNIGAQEMKVDKSMGFNVTDVTKDHKAMEHRVLQELKKAFRPEF 700
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
+NRIDE IVF L + +L +IV ++ ++ +RL +++ + +T K K+ +EGY+P YG
Sbjct: 701 INRIDETIVFHSLTEKELKQIVTLLTGQLTKRLAERDIHVKLTDGAKSKIAKEGYDPEYG 760
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
ARPL+RAI + +ED L+E +L G +QVGD++ + G
Sbjct: 761 ARPLKRAIQKNIEDRLSEELLRGNVQVGDTIEIGVKDG 798
>gi|54035876|sp|Q8YM56.2|CLPB2_ANASP RecName: Full=Chaperone protein ClpB 2
Length = 872
Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 151/269 (56%), Positives = 193/269 (71%), Gaps = 6/269 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRP +SF+F GPTGVGKTELA ALA F +++A+VRIDMSEYMEKH
Sbjct: 589 AIQRSRAGLADPNRPTASFVFLGPTGVGKTELAKALASYMFDTEDALVRIDMSEYMEKHA 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTE +R RP++VILFDEIEKAH DV N+ LQ+LDDGRVTD
Sbjct: 649 VSRLIGAPPGYVGYEEGGQLTETIRRRPYAVILFDEIEKAHPDVFNIFLQILDDGRVTDA 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS----DQMERGVAEELRRRFRPEFLNRIDE 177
+G TVD KNTIIIMTSNIG I I G D+M V E +R FRPEFLNRIDE
Sbjct: 709 QGHTVDFKNTIIIMTSNIGSQYIL--DIAGDNSRYDEMRHRVMEAMRNSFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
VI+F L+K +L +IV + ++ + RL+ + + L ++ L E GY+P +GARPL+R
Sbjct: 767 VIIFHSLDKKELRQIVQLQVERLKARLDDRKISLRLSDVALDFLAEVGYDPVFGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
AI R LE +A+ IL G GD++ +D
Sbjct: 827 AIQRELETQIAKAILRGEFNDGDTIFVDV 855
>gi|418637208|ref|ZP_13199533.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
lugdunensis VCU139]
gi|374839348|gb|EHS02862.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
lugdunensis VCU139]
Length = 819
Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 146/272 (53%), Positives = 202/272 (74%), Gaps = 9/272 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAETMFGEEDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFLNRI 175
VD +NT+IIMTSN+G + + G + + + + +EL+ FRPEFLNR+
Sbjct: 646 RVDFRNTVIIMTSNVGAQELQDQRFAGFGGASEGQDYETIRKTMMKELKNAFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D++IVF +L+K +L EIV +++ ++ +RL +++++ VT K+ + EEGY+P YGARPL
Sbjct: 706 DDIIVFHKLSKDELKEIVTMIVNKLTQRLSEQDIQIEVTDKAKEVIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RAI + +EDNL+E+IL G G +VT+D D
Sbjct: 766 IRAIQKTVEDNLSELILEGNQIEGKAVTIDHD 797
>gi|429220788|ref|YP_007182432.1| ATP-dependent chaperone ClpB [Deinococcus peraridilitoris DSM
19664]
gi|429131651|gb|AFZ68666.1| ATP-dependent chaperone ClpB [Deinococcus peraridilitoris DSM
19664]
Length = 852
Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 151/274 (55%), Positives = 198/274 (72%), Gaps = 3/274 (1%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DP RPI SF+F GPTGVGKTELA ALA F +++AMVR+DMSEYMEKHT
Sbjct: 573 AIRRSRAGLSDPRRPIGSFMFLGPTGVGKTELAKALAAFLFDTEDAMVRLDMSEYMEKHT 632
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG+E GGQLTEAVR RP+SVIL DEIEKAH DV NV+LQ+LDDGR+TDG
Sbjct: 633 VARLIGAPPGYVGYEEGGQLTEAVRRRPYSVILLDEIEKAHPDVFNVLLQVLDDGRLTDG 692
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQ--MERGVAEELRRRFRPEFLNRIDEVI 179
+G+TVD +N+++IMTSNIG +I G D + V L + FRPEFLNR+D++I
Sbjct: 693 QGRTVDFRNSLVIMTSNIGSPLILEAQARGDDAETIRSAVMGALSQAFRPEFLNRVDDII 752
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF L L +IVDI L+ + ERL + + L +T L GY+P++GARPL+RAI
Sbjct: 753 VFDALTSADLHQIVDIQLRGLRERLAERRVTLHLTDAAVNHLAAVGYDPNFGARPLKRAI 812
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
GR +E LA IL+G + G ++T+D GG+++
Sbjct: 813 GREIETPLAREILSGKLPDGSALTLDY-QGGHLV 845
>gi|374334801|ref|YP_005091488.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Oceanimonas
sp. GK1]
gi|372984488|gb|AEY00738.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Oceanimonas
sp. GK1]
Length = 857
Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 146/273 (53%), Positives = 201/273 (73%), Gaps = 1/273 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRP+ SFLF GPTGVGKTEL ALA F S++AMVRIDMSE+MEKH+
Sbjct: 583 AIRRSRAGLSDPNRPVGSFLFMGPTGVGKTELCKALADFLFDSRDAMVRIDMSEFMEKHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR +P+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS-DQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT++IMTSNIG +I S DQM+ + E L +FRPEF+NRIDE++V
Sbjct: 703 QGRTVDFRNTVVIMTSNIGSDLIQEHSASKDYDQMKAMLMEVLGHQFRPEFINRIDEIVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L + Q+ I I L+ + ERLE+ + +++++ +KL G++P +GARPL+RAI
Sbjct: 763 FHPLAQDQIKAIARIQLQGLVERLESMDYQVSISDALLEKLATAGFDPLFGARPLKRAIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
+ +ED LA+ +L+G + G + +D D G V+
Sbjct: 823 QKVEDPLAQAMLSGRVVPGKLLKLDADDNGLVL 855
>gi|291546937|emb|CBL20045.1| ATPases with chaperone activity, ATP-binding subunit [Ruminococcus
sp. SR1/5]
Length = 821
Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 153/274 (55%), Positives = 198/274 (72%), Gaps = 11/274 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R RVG++DP RPI SFLF GPTGVGKTEL+ ALA FGS++AM+R+DMSEYMEKH+
Sbjct: 531 AVKRGRVGLKDPARPIGSFLFLGPTGVGKTELSKALAEAVFGSEQAMIRVDMSEYMEKHS 590
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+E GGQL+E VR P+SVILFDEIEKAH DV N++LQ+LDDG +TD
Sbjct: 591 VSKMIGSPPGYVGYEEGGQLSEKVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDA 650
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
+G+ VD K TIIIMTSN G +I LG ++M+ GV EE+RR F+PEF
Sbjct: 651 QGRKVDFKQTIIIMTSNAGAQMIMEPKHLGFMSGDTEKRDYERMKSGVMEEVRRMFKPEF 710
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAK-NMELTVTHTFKKKLIEEGYNPSY 230
LNRIDE++VF LNK + +IV I+LK + +R + + ++ L VT K + + G++ Y
Sbjct: 711 LNRIDEIMVFHSLNKENIRKIVTILLKNLEKRCQEQLDIILKVTGAAKDLIADAGFDSKY 770
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTM 264
GARPLRRAI +ED +A IL G I+ GD+V +
Sbjct: 771 GARPLRRAIQTKIEDEMATEILEGRIKAGDTVQV 804
>gi|255539981|ref|XP_002511055.1| ERD1 protein, chloroplast precursor, putative [Ricinus communis]
gi|223550170|gb|EEF51657.1| ERD1 protein, chloroplast precursor, putative [Ricinus communis]
Length = 946
Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 148/292 (50%), Positives = 213/292 (72%), Gaps = 15/292 (5%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+RVG++DP+RPI++ +F GPTGVGKTELA ALA YFGS+ AM+R+DMSEYME+HT
Sbjct: 645 AVKRSRVGLKDPDRPIAAMMFCGPTGVGKTELAKALAACYFGSESAMLRLDMSEYMERHT 704
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK G+PPGYVG+ GG LTEA+R RP +++L DEIEKAH DV N++LQL +DG +TD
Sbjct: 705 VSKLIGAPPGYVGYGEGGTLTEAIRRRPFTLVLLDEIEKAHPDVFNILLQLFEDGHLTDS 764
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA---RESI--LGSDQ-------MERGVAEELRRRFRP 169
+G+ V KN +++MTSN+G + IA R SI + +D ++ V EEL+ FRP
Sbjct: 765 QGRKVSFKNALVVMTSNVGSTAIAKGGRTSIGFMIADNESTSYAGIKALVMEELKTYFRP 824
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
E LNRIDEV+VF L K+Q+++I+ +ML+E+ ERL + + L V+ T K+ + ++GY+P
Sbjct: 825 ELLNRIDEVVVFHPLEKIQMLKILSLMLREVKERLISLGIGLEVSETIKELVCKQGYDPV 884
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGS 281
YGARPLRRA+ ++E+ ++E +L G + GD+ +D D+ GN ++ NGS
Sbjct: 885 YGARPLRRAVTEIIENPVSEALLAGEFKPGDTARVDLDASGNPVVI---NGS 933
>gi|170077059|ref|YP_001733697.1| endopeptidase Clp ATP-binding subunit B [Synechococcus sp. PCC
7002]
gi|169884728|gb|ACA98441.1| endopeptidase Clp ATP-binding chain B [Synechococcus sp. PCC 7002]
Length = 979
Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 152/281 (54%), Positives = 200/281 (71%), Gaps = 7/281 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP+RPI SF+F GPTGVGKTELA ALA F S+EAMVRIDMSEYMEKH
Sbjct: 604 AIRRARAGMKDPSRPIGSFMFMGPTGVGKTELARALAAFLFDSEEAMVRIDMSEYMEKHA 663
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQL+EAVR RP+SV+L DE+EKAH+DV N++LQ+LDDGR+TD
Sbjct: 664 VSRLIGAPPGYVGYEEGGQLSEAVRRRPYSVVLLDEVEKAHKDVFNILLQVLDDGRITDS 723
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS----DQMERGVAEELRRRFRPEFLNRIDE 177
+G+ VD +NTII+MTSNIG I S+ G D+M V LR+ FRPEFLNRIDE
Sbjct: 724 QGRVVDFRNTIIVMTSNIGSEFIL--SLSGDDANYDKMRDKVTGALRKNFRPEFLNRIDE 781
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+F L + +L EIV + + I + L + + L++T ++E GY+P++GARPL+R
Sbjct: 782 LIIFHTLKRDELREIVKLQIHRIEKLLADQKITLSLTDAALDHVVEAGYDPTFGARPLKR 841
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHR 278
AI R LE+ +A IL GD + +DC G ++ R R
Sbjct: 842 AIQRELENPIANRILETDFMEGDRILVDCVEGA-LVFDRQR 881
>gi|292900313|ref|YP_003539682.1| chaperone ClpB [Erwinia amylovora ATCC 49946]
gi|291200161|emb|CBJ47287.1| chaperone ClpB (heat shock protein) [Erwinia amylovora ATCC 49946]
Length = 857
Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 148/269 (55%), Positives = 197/269 (73%), Gaps = 1/269 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F S +AMVRIDMSE+MEKH+
Sbjct: 583 AIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA-RESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT++IMTSN+G +I R L +M+ V + + FRPEF+NRIDE++V
Sbjct: 703 QGRTVDFRNTVVIMTSNLGSDLIQERFGALNYGEMKELVMSVVSQNFRPEFINRIDELVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L + + I I L+ +Y+RLE + L V+ ++L E GY+P YGARPL+RAI
Sbjct: 763 FHPLGEEHIASIARIQLQRLYQRLEERGFTLHVSDAALQQLGENGYDPVYGARPLKRAIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
+ +E+ LA+ IL+G + G ++ MD D+G
Sbjct: 823 QQIENPLAQQILSGALIPGKTIEMDVDAG 851
>gi|440682733|ref|YP_007157528.1| ATP-dependent chaperone ClpB [Anabaena cylindrica PCC 7122]
gi|428679852|gb|AFZ58618.1| ATP-dependent chaperone ClpB [Anabaena cylindrica PCC 7122]
Length = 872
Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 150/269 (55%), Positives = 193/269 (71%), Gaps = 6/269 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRPI+SF+F GPTGVGKTELA ALA F ++E++VRIDMSEYMEKHT
Sbjct: 589 AIQRSRAGLSDPNRPIASFIFLGPTGVGKTELAKALAAYMFDTEESLVRIDMSEYMEKHT 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEA+R RP++VILFDEIEKAH DV N+ LQ+LDDGRVTD
Sbjct: 649 VSRLIGAPPGYVGYEEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNIFLQILDDGRVTDA 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS----DQMERGVAEELRRRFRPEFLNRIDE 177
+G+T+D KN IIIMTSNIG I + G D+M V E +R FRPEFLNR+DE
Sbjct: 709 QGRTIDFKNCIIIMTSNIGSQYIL--DVAGDDSRYDEMRHRVMEAMRGSFRPEFLNRVDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
I+F L K +L +IV + + + +RL + M L ++ L E GY+P +GARPL+R
Sbjct: 767 FIIFHSLQKSELRQIVQLQVDRLRQRLSDRKMSLRLSDYALDFLAEVGYDPVFGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
AI R LE +A+ IL G GD++ +D
Sbjct: 827 AIQRELETQIAKAILRGEFNDGDTIFVDV 855
>gi|334338866|ref|YP_004543846.1| ATPase AAA-2 domain-containing protein [Desulfotomaculum ruminis
DSM 2154]
gi|334090220|gb|AEG58560.1| ATPase AAA-2 domain protein [Desulfotomaculum ruminis DSM 2154]
Length = 815
Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 150/272 (55%), Positives = 197/272 (72%), Gaps = 11/272 (4%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RP+ SF+F GPTGVGKTELA ALA FG ++A+VRIDMSEYMEKH VS+ G+
Sbjct: 536 GLKDPKRPVGSFIFLGPTGVGKTELARALAEALFGDEDALVRIDMSEYMEKHAVSRLVGA 595
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG++ GGQLTEAVR +P+SV+L DEIEKAH DV N++LQ+L+DGR+TD KG+ VD+
Sbjct: 596 PPGYVGYDEGGQLTEAVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRVVDM 655
Query: 129 KNTIIIMTSNIGDSVIARESILG----SDQ-------MERGVAEELRRRFRPEFLNRIDE 177
+NT+IIMTSNIG S + +G +DQ M+ V E L+R FRPEFLNRIDE
Sbjct: 656 RNTVIIMTSNIGLSTLKATGKVGFAASADQSRAEYEKMKERVEEALKRTFRPEFLNRIDE 715
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
IVF L++ + EIV++MLKE+ +R+E + L + +++L E GY+ +GARPLRR
Sbjct: 716 SIVFHSLSREHIKEIVNLMLKEVTKRMEDPEVYLEFSEAARERLAETGYSEEFGARPLRR 775
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
I R +ED L+E +L G Q GD V +D G
Sbjct: 776 EIQRKVEDRLSEELLRGTFQKGDKVAVDVQEG 807
>gi|419761157|ref|ZP_14287416.1| chaperone ClpB [Thermosipho africanus H17ap60334]
gi|407513700|gb|EKF48587.1| chaperone ClpB [Thermosipho africanus H17ap60334]
Length = 790
Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 146/274 (53%), Positives = 200/274 (72%), Gaps = 2/274 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ +AR GI+DPNRPI +FLF GP+GVGKTELA +A FGS+ +++RIDMSEYMEKH+
Sbjct: 507 AIRKARAGIKDPNRPIGTFLFLGPSGVGKTELAKTIAELLFGSENSLIRIDMSEYMEKHS 566
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG++ GGQLTEAVR +P+SVIL DE+EKAH +V NV+LQ+ DDGR+TDG
Sbjct: 567 VARLIGAPPGYVGYDQGGQLTEAVRRKPYSVILLDEVEKAHPEVFNVLLQVFDDGRLTDG 626
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD--QMERGVAEELRRRFRPEFLNRIDEVI 179
KG TVD +NTIIIMTSN+ I R+ G D ++E V E+L+ FRPEF+NRID V+
Sbjct: 627 KGNTVDFRNTIIIMTSNLASDKILRKVEAGIDFEKIEESVREDLKHYFRPEFINRIDHVV 686
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
+F+ L K + EIV+ ++ + +RL+ K +++ +T K+ L E GY+P++GARPLRR I
Sbjct: 687 IFKPLTKEHMKEIVEKLVARLEKRLKEKQLKIKLTDEAKELLAERGYDPAFGARPLRRLI 746
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
R +E L+ I+ G I GD V +D G +I
Sbjct: 747 EREIETPLSRKIIAGEIAEGDIVLVDAKDGELII 780
>gi|292487321|ref|YP_003530193.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Erwinia
amylovora CFBP1430]
gi|291552740|emb|CBA19785.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Erwinia
amylovora CFBP1430]
gi|312171427|emb|CBX79686.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Erwinia
amylovora ATCC BAA-2158]
Length = 857
Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 148/269 (55%), Positives = 197/269 (73%), Gaps = 1/269 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F S +AMVRIDMSE+MEKH+
Sbjct: 583 AIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA-RESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT++IMTSN+G +I R L +M+ V + + FRPEF+NRIDE++V
Sbjct: 703 QGRTVDFRNTVVIMTSNLGSDLIQERFGALNYGEMKELVMSVVSQNFRPEFINRIDELVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L + + I I L+ +Y+RLE + L V+ ++L E GY+P YGARPL+RAI
Sbjct: 763 FHPLGEEHIASIARIQLQRLYQRLEERGFTLHVSDAALQQLGENGYDPVYGARPLKRAIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
+ +E+ LA+ IL+G + G ++ MD D+G
Sbjct: 823 QQIENPLAQQILSGALIPGKTIEMDVDAG 851
>gi|197116967|ref|YP_002137394.1| ATP-dependent chaperone ClpB [Geobacter bemidjiensis Bem]
gi|197086327|gb|ACH37598.1| ATP-dependent chaperone ClpB [Geobacter bemidjiensis Bem]
Length = 864
Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 146/269 (54%), Positives = 194/269 (72%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G+ DPNRPI SF+F GPTGVGKTE A ALA F +A+VRIDMSEY EKHTV++
Sbjct: 590 RARSGLSDPNRPIGSFIFLGPTGVGKTETARALASFLFDDDQAIVRIDMSEYQEKHTVAR 649
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E GGQLTEAVR RP+ ++LFDEIEKAH +V NV LQ+LDDGR+TDG+G+
Sbjct: 650 LIGAPPGYVGYEEGGQLTEAVRRRPYCIVLFDEIEKAHPEVFNVFLQILDDGRLTDGQGR 709
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVFRQL 184
TVD KN++IIMTSN+G I + +M+ V E LR F+PEFLNR+DE++++ L
Sbjct: 710 TVDFKNSVIIMTSNLGSQWIQQYGAADYGKMQSEVMETLREAFKPEFLNRVDEIVIYHSL 769
Query: 185 NKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGRLLE 244
++ EIV I L+ + +RLE K + L VT ++ L EGY+P+YGARPL+RA+ R ++
Sbjct: 770 PLERIKEIVSIQLQSLTKRLEEKGLGLEVTEQAREFLAREGYDPAYGARPLKRALQRKIQ 829
Query: 245 DNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
D LA ++L GD V +D + G+ +
Sbjct: 830 DPLALMLLENKFAPGDIVVVDLPAQGDSL 858
>gi|345021357|ref|ZP_08784970.1| ATP-dependent Clp protease [Ornithinibacillus scapharcae TW25]
Length = 808
Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 145/282 (51%), Positives = 201/282 (71%), Gaps = 9/282 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA F ++AM+RIDMSEYMEKH+
Sbjct: 525 AIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEAMFADEDAMIRIDMSEYMEKHS 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG+E GGQLTE VR +P+SV+L DEIEKAH +V N++LQ+L+DGR+TD
Sbjct: 585 TSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDS 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMERG---------VAEELRRRFRPEFL 172
KG+ VD +NT++IMTSN+G S + R +G + E G V +EL++ FRPEFL
Sbjct: 645 KGRVVDFRNTVLIMTSNVGASELKRNKYVGFNLEEEGKDYKDMKSKVIDELKKAFRPEFL 704
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE IVF L K + IV +M+K++ +RL ++++ ++T +K+ EG++P YGA
Sbjct: 705 NRIDETIVFHSLEKKHMKSIVTLMIKDVQKRLAEQDIDFSLTDKAVEKIANEGFDPEYGA 764
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
RPLRR+I + +ED ++E +L G I G V + ++ G I+
Sbjct: 765 RPLRRSIQKNIEDLMSEELLKGKISFGQKVKIGLNNKGEFII 806
>gi|339626578|ref|YP_004718221.1| class III stress response-related ATPase [Sulfobacillus acidophilus
TPY]
gi|379006033|ref|YP_005255484.1| ATPase AAA-2 domain-containing protein [Sulfobacillus acidophilus
DSM 10332]
gi|339284367|gb|AEJ38478.1| class III stress response-related ATPase [Sulfobacillus acidophilus
TPY]
gi|361052295|gb|AEW03812.1| ATPase AAA-2 domain protein [Sulfobacillus acidophilus DSM 10332]
Length = 823
Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 149/297 (50%), Positives = 207/297 (69%), Gaps = 11/297 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G+++P RPI SFLF GPTGVGK+ELA ALA FG ++AM+ IDMSEYME+H
Sbjct: 525 AIRRARAGLKNPRRPIGSFLFLGPTGVGKSELAKALAQALFGDEDAMITIDMSEYMERHA 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEAVR P+SV+L DEIEKAH +V N++LQ+L++GR+T+
Sbjct: 585 VSRLVGAPPGYVGYEEGGQLTEAVRRHPYSVVLLDEIEKAHPEVFNILLQVLEEGRLTEA 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQ---------MERGVAEELRRRFRPEFL 172
KG+ VD +NT+IIMTSN+G VI R++ +G + M+ + +E++ FRPEF+
Sbjct: 645 KGRAVDFRNTVIIMTSNVGAEVIKRQATIGFRKDTEETAYRDMKDRLMDEVKHTFRPEFI 704
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NR+DE+IVF +L++ L EIV IMLKE+ +R+ LTV+ K + +EG++P +GA
Sbjct: 705 NRVDEIIVFHELSEKHLAEIVGIMLKEVEDRIGQNGYRLTVSDAAKAIIAKEGFDPVFGA 764
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI--MYRHRNGSMTVCAR 287
RPLRRAI L+ED LAE IL G G + +D + G V M H + ++ +
Sbjct: 765 RPLRRAIQHLVEDELAEQILAGKFAEGAHIYVDAEDGKLVFRTMTEHDSAMESIAQK 821
>gi|320333992|ref|YP_004170703.1| ATP-dependent chaperone ClpB [Deinococcus maricopensis DSM 21211]
gi|319755281|gb|ADV67038.1| ATP-dependent chaperone ClpB [Deinococcus maricopensis DSM 21211]
Length = 853
Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 151/270 (55%), Positives = 194/270 (71%), Gaps = 2/270 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G+ DPNRP+ SF+F GPTGVGKTELA ALA F S +AMVR+DMSEYMEKHT
Sbjct: 574 AIRRARAGLNDPNRPLGSFMFLGPTGVGKTELAKALAEFLFDSSDAMVRLDMSEYMEKHT 633
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG+E GGQLTEAVR RP+SVIL DE+EKAH DV NV+LQ+LDDGR+TDG
Sbjct: 634 VARLIGAPPGYVGYEEGGQLTEAVRRRPYSVILLDEVEKAHPDVFNVLLQVLDDGRLTDG 693
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS--DQMERGVAEELRRRFRPEFLNRIDEVI 179
+G+TVD +NT++IMTSNIG +I G D + V L+ FRPEFLNRID++I
Sbjct: 694 QGRTVDFRNTLVIMTSNIGSPLILEAQARGEDPDAIRDAVMGALQGNFRPEFLNRIDDII 753
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF L + IVDI ++ + +RL + + + +T T K L GY+P++GARPL+RAI
Sbjct: 754 VFDALTNADIHRIVDIQMRGLVKRLAERRITVHLTDTAKDHLARVGYDPNFGARPLKRAI 813
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
R +E LA IL+G + G S+T+D G
Sbjct: 814 AREVETPLAREILSGRVADGSSLTVDYLDG 843
>gi|160895376|ref|ZP_02076146.1| hypothetical protein CLOL250_02934 [Clostridium sp. L2-50]
gi|156862947|gb|EDO56378.1| ATPase family associated with various cellular activities (AAA)
[Clostridium sp. L2-50]
Length = 817
Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 148/274 (54%), Positives = 200/274 (72%), Gaps = 11/274 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+RVG++DP RP+ SFLF GPTGVGKTEL+ ALA FGS++A++R+DMSEYMEKH+
Sbjct: 527 AIKRSRVGLKDPKRPVGSFLFLGPTGVGKTELSKALAEAVFGSEDALIRVDMSEYMEKHS 586
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGFE GGQL+E VR P+SVILFDEIEKAH DV N++LQ+LDDG +TD
Sbjct: 587 VSKLIGSPPGYVGFEEGGQLSEKVRSNPYSVILFDEIEKAHSDVFNILLQVLDDGHITDS 646
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
+G+ VD KNTIIIMTSN G I LG + M++ V +E+++ F+PEF
Sbjct: 647 QGRKVDFKNTIIIMTSNTGAQRIIDPKKLGFVTASNADTEHEDMKKNVMDEVKQNFKPEF 706
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAK-NMELTVTHTFKKKLIEEGYNPSY 230
LNRID++IVFR L + + I +++LKE+ +R+ ++ ++L KK + E+GY+ Y
Sbjct: 707 LNRIDDIIVFRALTEDDVRNISNLLLKELKQRVASQMEIQLKFGDAVKKLIFEKGYDKKY 766
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTM 264
GARPL+RAI +ED LAE +L G I+ GD+V +
Sbjct: 767 GARPLKRAIQTNIEDELAEAVLKGEIKRGDTVQV 800
>gi|325294725|ref|YP_004281239.1| ATPase AAA [Desulfurobacterium thermolithotrophum DSM 11699]
gi|325065173|gb|ADY73180.1| ATPase AAA-2 domain protein [Desulfurobacterium thermolithotrophum
DSM 11699]
Length = 844
Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 146/271 (53%), Positives = 200/271 (73%), Gaps = 4/271 (1%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++ PNRP+ SFLF GPTGVGKTELA LA FG + A++R+DMSEYMEKH
Sbjct: 538 AIRRARAGLQPPNRPLGSFLFLGPTGVGKTELAKTLAEYLFGDETAIIRLDMSEYMEKHA 597
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK G+PPGYVG+E GGQLTEAVR +P+SVIL DEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 598 VSKLIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPDVFNILLQILDDGRLTDA 657
Query: 122 KGQTVDLKNTIIIMTSNIGDSV---IARESILGS-DQMERGVAEELRRRFRPEFLNRIDE 177
KG+TVD NT+IIMTSN+G +++E D+++ + EL++RFRPEFLNRIDE
Sbjct: 658 KGRTVDFSNTVIIMTSNVGSEYLMNLSKEEFEKRYDEIKEQIMNELKKRFRPEFLNRIDE 717
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+F L++ ++ +IVD+++ ++ +RLE + +++ +T K L ++GY P +GARPLRR
Sbjct: 718 IIIFHPLSEEEIKQIVDLLITKLNKRLEDRGIKIVLTEEAKSALAKKGYVPEFGARPLRR 777
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDS 268
I R +E L+ IL G ++ GD V +D D
Sbjct: 778 TIQRDIETPLSVKILEGTVKDGDKVKIDYDK 808
>gi|88770803|gb|ABD52004.1| ClpB [Methanohalophilus portucalensis FDF-1]
Length = 869
Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 150/268 (55%), Positives = 197/268 (73%), Gaps = 2/268 (0%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RA+ GI+DP RPI SF+F GPTGVGKTELA ALA E F S++ M+R+DMSEYMEKHTV++
Sbjct: 590 RAQAGIKDPRRPIGSFIFLGPTGVGKTELAKALATELFDSEDHMIRVDMSEYMEKHTVAR 649
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+P GY+G + GGQLTEAVR P+SV+LFDEIEKAH DV N+MLQLLDDGR+TD KG+
Sbjct: 650 LIGAPLGYIGHDEGGQLTEAVRRNPYSVVLFDEIEKAHHDVFNIMLQLLDDGRLTDSKGR 709
Query: 125 TVDLKNTIIIMTSNIG-DSVIAR-ESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVFR 182
TVD KNTI+IMTSNI D I++ E + +M+ EL + FRPEFLNRIDE+ +FR
Sbjct: 710 TVDFKNTIVIMTSNICVDYAISKLEEGVAYSKMQETAMNELTKHFRPEFLNRIDEIAIFR 769
Query: 183 QLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGRL 242
L K QL IVDI ++++ +RL+ + ++L +T KK L + GY+ +YGARPL+R I
Sbjct: 770 ALTKDQLTYIVDIKIEDLVQRLKERRIDLEITDRAKKYLGDAGYSETYGARPLKRVIQNE 829
Query: 243 LEDNLAEIILTGYIQVGDSVTMDCDSGG 270
LE + + I++G + D+V +D D G
Sbjct: 830 LETEVGKRIVSGEVMESDTVVVDADERG 857
>gi|428784253|ref|ZP_19001745.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Erwinia
amylovora ACW56400]
gi|426277392|gb|EKV55118.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Erwinia
amylovora ACW56400]
Length = 836
Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 148/269 (55%), Positives = 197/269 (73%), Gaps = 1/269 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F S +AMVRIDMSE+MEKH+
Sbjct: 562 AIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHS 621
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 622 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 681
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA-RESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT++IMTSN+G +I R L +M+ V + + FRPEF+NRIDE++V
Sbjct: 682 QGRTVDFRNTVVIMTSNLGSDLIQERFGALNYGEMKELVMSVVSQNFRPEFINRIDELVV 741
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L + + I I L+ +Y+RLE + L V+ ++L E GY+P YGARPL+RAI
Sbjct: 742 FHPLGEEHIASIARIQLQRLYQRLEERGFTLHVSDAALQQLGENGYDPVYGARPLKRAIQ 801
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
+ +E+ LA+ IL+G + G ++ MD D+G
Sbjct: 802 QQIENPLAQQILSGALIPGKTIEMDVDAG 830
>gi|15612666|ref|NP_240969.1| class III stress response-related ATPase [Bacillus halodurans
C-125]
gi|10172715|dbj|BAB03822.1| class III stress response-related ATPase [Bacillus halodurans
C-125]
Length = 813
Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 148/278 (53%), Positives = 194/278 (69%), Gaps = 9/278 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA A+A FG ++A +RIDMSEYMEKH S+
Sbjct: 528 RARAGLKDPKRPIGSFIFLGPTGVGKTELARAVAETLFGDEDAFIRIDMSEYMEKHATSR 587
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPGYVG + GGQLTE VR +P+SVIL DEIEKAH +V N++LQ+L+DGR+TD KG+
Sbjct: 588 LVGSPPGYVGHDEGGQLTEKVRRKPYSVILLDEIEKAHPEVFNILLQVLEDGRLTDSKGR 647
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFLNRI 175
TVD +NT +IMTSN+G S + + LG M+ V EL+ FRPEFLNRI
Sbjct: 648 TVDFRNTAVIMTSNVGASTLRKNKFLGFTTDSEGSEYKDMKDKVMTELKNSFRPEFLNRI 707
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
DE+IVF L K + EI+ +M ++ +RLE + + +T K K+ + GY+P YGARPL
Sbjct: 708 DEIIVFHSLEKKHVREIITLMADQLKKRLEEQGVSFELTEAAKDKITDLGYDPEYGARPL 767
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
RRA+ R +ED L+E +L G IQ G +D ++G V+
Sbjct: 768 RRALQREVEDRLSEELLKGTIQKGQRAIIDVENGELVV 805
>gi|17232576|ref|NP_489124.1| endopeptidase Clp ATP-binding subunit B [Nostoc sp. PCC 7120]
gi|17134222|dbj|BAB76783.1| endopeptidase Clp ATP-binding chain B [Nostoc sp. PCC 7120]
Length = 835
Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 151/269 (56%), Positives = 193/269 (71%), Gaps = 6/269 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRP +SF+F GPTGVGKTELA ALA F +++A+VRIDMSEYMEKH
Sbjct: 552 AIQRSRAGLADPNRPTASFVFLGPTGVGKTELAKALASYMFDTEDALVRIDMSEYMEKHA 611
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTE +R RP++VILFDEIEKAH DV N+ LQ+LDDGRVTD
Sbjct: 612 VSRLIGAPPGYVGYEEGGQLTETIRRRPYAVILFDEIEKAHPDVFNIFLQILDDGRVTDA 671
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS----DQMERGVAEELRRRFRPEFLNRIDE 177
+G TVD KNTIIIMTSNIG I I G D+M V E +R FRPEFLNRIDE
Sbjct: 672 QGHTVDFKNTIIIMTSNIGSQYIL--DIAGDNSRYDEMRHRVMEAMRNSFRPEFLNRIDE 729
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
VI+F L+K +L +IV + ++ + RL+ + + L ++ L E GY+P +GARPL+R
Sbjct: 730 VIIFHSLDKKELRQIVQLQVERLKARLDDRKISLRLSDVALDFLAEVGYDPVFGARPLKR 789
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
AI R LE +A+ IL G GD++ +D
Sbjct: 790 AIQRELETQIAKAILRGEFNDGDTIFVDV 818
>gi|425445231|ref|ZP_18825264.1| Chaperone [Microcystis aeruginosa PCC 9443]
gi|389734825|emb|CCI01576.1| Chaperone [Microcystis aeruginosa PCC 9443]
Length = 872
Score = 307 bits (786), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 151/269 (56%), Positives = 192/269 (71%), Gaps = 6/269 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRP +SF+F GPTGVGKTELA ALA F ++EA+VRIDMSEYMEKH+
Sbjct: 589 AIQRSRAGLSDPNRPTASFIFLGPTGVGKTELAKALARNLFDTEEALVRIDMSEYMEKHS 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTEA+R RP+SVILFDEIEKAH DV NVMLQ+LDDGR+TD
Sbjct: 649 VSRLMGAPPGYVGYDEGGQLTEAIRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRLTDS 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS----DQMERGVAEELRRRFRPEFLNRIDE 177
+G VD KNTIIIMTSNIG I + G ++M+ V E +R FRPEFLNRIDE
Sbjct: 709 QGHLVDFKNTIIIMTSNIGSQYIL--DVAGDESRYEEMQARVMEAMRNSFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
I+F L K QL IV + L + +RL + + L + L E GY+P YGARPL+R
Sbjct: 767 TIIFHSLQKAQLRSIVKLQLANLSDRLMEQKLALKLADIALDYLAEIGYDPVYGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
A+ R +E +A+ IL G + GD++ +D
Sbjct: 827 AVQRYVETPIAKAILRGEFKGGDTIFVDV 855
>gi|354596494|ref|ZP_09014511.1| ATP-dependent chaperone ClpB [Brenneria sp. EniD312]
gi|353674429|gb|EHD20462.1| ATP-dependent chaperone ClpB [Brenneria sp. EniD312]
Length = 857
Score = 307 bits (786), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 152/273 (55%), Positives = 199/273 (72%), Gaps = 2/273 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++ R+R G+ DPNRPI SFLF GPTGVGKTEL LA F S +AMVRIDMSE+MEKH+
Sbjct: 583 SIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLASFLFDSDDAMVRIDMSEFMEKHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR RP+SVIL DEIEKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMERG-VAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT++IMTSN+G +I S RG V E + FRPEF+NRIDEV+V
Sbjct: 703 QGRTVDFRNTVVIMTSNLGSDLIQERFGERSYAEMRGMVLEVVSHSFRPEFINRIDEVVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L + + I I L+ +Y+RLE + +T+T ++L E G++P YGARPL+RAI
Sbjct: 763 FHPLGRQHIASIAKIQLQRLYKRLEERGYTVTITDAALERLGEIGFDPVYGARPLKRAIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
+L+E+ LA+ IL+G + G VT+D D G N++
Sbjct: 823 QLIENPLAQQILSGKLIPGKPVTLDAD-GENIV 854
>gi|118444397|ref|YP_877171.1| negative regulator of genetic competence clpC/mecB [Clostridium
novyi NT]
gi|118134853|gb|ABK61897.1| Negative regulator of genetic competence clpC/mecB [Clostridium
novyi NT]
Length = 813
Score = 307 bits (786), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 152/269 (56%), Positives = 197/269 (73%), Gaps = 11/269 (4%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RARVG++D RPI SF+F GPTGVGKTEL+ ALA FG + M+RIDMSEYMEKH VS+
Sbjct: 530 RARVGLKDSKRPIGSFIFLGPTGVGKTELSKALAEAMFGDENNMIRIDMSEYMEKHAVSR 589
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPGYVG + GGQLTE VR P+SVILFDEIEKAH +V N++LQ+L+DGR+TD KG+
Sbjct: 590 LVGSPPGYVGHDEGGQLTEQVRRHPYSVILFDEIEKAHPEVFNILLQILEDGRLTDSKGK 649
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG-----------SDQMERGVAEELRRRFRPEFLN 173
TVD KNTIII+TSN+G S I +++ LG ++M+ V EEL+ FRPEFLN
Sbjct: 650 TVDFKNTIIILTSNVGASRINKQNTLGFSRSEDEAEDEYEKMKDNVMEELKNSFRPEFLN 709
Query: 174 RIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGAR 233
RID++IVF L++ L EIV +ML E+ RL+ K++ + +K L+++G + +YGAR
Sbjct: 710 RIDDIIVFHSLDEENLKEIVKLMLDEVSNRLKDKDIYIDFDDETEKLLVKKGIDVTYGAR 769
Query: 234 PLRRAIGRLLEDNLAEIILTGYIQVGDSV 262
PLRR I R++ED L+E IL G I+ GD V
Sbjct: 770 PLRRTITRIIEDKLSEEILKGVIKKGDKV 798
>gi|329929240|ref|ZP_08282999.1| negative regulator of genetic competence ClpC/MecB [Paenibacillus
sp. HGF5]
gi|328936799|gb|EGG33238.1| negative regulator of genetic competence ClpC/MecB [Paenibacillus
sp. HGF5]
Length = 818
Score = 307 bits (786), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 150/292 (51%), Positives = 207/292 (70%), Gaps = 13/292 (4%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RP+ SF+F GPTGVGKTELA ALA FG + A+VRIDMSEYMEKH+ S+
Sbjct: 526 RARAGLKDPKRPMGSFIFLGPTGVGKTELARALAEAMFGDENAVVRIDMSEYMEKHSTSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E GGQLTE VR +P+SV+L DEIEKAH +V N++LQ+L+DGR+TD KG+
Sbjct: 586 LVGAPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEFLNR 174
VD +NT+II+TSN+G I + S LG + M+ V +EL++ FRPEFLNR
Sbjct: 646 VVDFRNTLIILTSNVGAEAIKKNSTLGFTAVTDAGRDYNNMKGKVMDELKKSFRPEFLNR 705
Query: 175 IDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARP 234
IDE+IVF L + + EIV +M E+ +RL+ + +T K + +EGY+P++GARP
Sbjct: 706 IDEIIVFHSLEEKHIAEIVTLMSDELRKRLKEFEVHFELTDKAKAFIAKEGYDPAFGARP 765
Query: 235 LRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMTVCA 286
LRRAI + +ED L+E +L G + GDS+ +D +G V+ ++N S+T +
Sbjct: 766 LRRAIQKHIEDRLSEELLKGNVAKGDSLVIDEANGELVV---NKNQSVTAAS 814
>gi|428216552|ref|YP_007101017.1| ATP-dependent chaperone ClpB [Pseudanabaena sp. PCC 7367]
gi|427988334|gb|AFY68589.1| ATP-dependent chaperone ClpB [Pseudanabaena sp. PCC 7367]
Length = 875
Score = 307 bits (786), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 151/271 (55%), Positives = 198/271 (73%), Gaps = 6/271 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+++R+R G+ DPNRPI+SF+F GPTGVGKTELA ALA F +++AMVRIDMSEYMEKH+
Sbjct: 589 SIQRSRAGLADPNRPIASFIFMGPTGVGKTELAKALAAYLFDAEDAMVRIDMSEYMEKHS 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTE VR RP++VILFDEIEKAH DV N+MLQ+LDDGRVTD
Sbjct: 649 VSRLVGAPPGYVGYEEGGQLTEIVRRRPYAVILFDEIEKAHPDVFNIMLQILDDGRVTDS 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD----QMERGVAEELRRRFRPEFLNRIDE 177
+G+TVD KNT+IIMTSNIG I ++G D +M V LR FRPEFLNR+DE
Sbjct: 709 QGRTVDFKNTVIIMTSNIGSQFIL--DVVGDDSRYEEMRDRVINALRANFRPEFLNRVDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+F L K +L EIV + +K + +RL + M L ++ + E GY+P YGARPL+R
Sbjct: 767 IIIFHALVKAELREIVKLQIKRLEKRLVDRKMGLKLSEAALDFIAEVGYDPVYGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDS 268
I R +E +A+ +L G GD++ +D ++
Sbjct: 827 IIQRQIETQIAKSLLRGEFGEGDTIFVDIEN 857
>gi|423074005|ref|ZP_17062740.1| ATP-dependent chaperone protein ClpB [Desulfitobacterium hafniense
DP7]
gi|361855154|gb|EHL07151.1| ATP-dependent chaperone protein ClpB [Desulfitobacterium hafniense
DP7]
Length = 864
Score = 307 bits (786), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 148/274 (54%), Positives = 197/274 (71%), Gaps = 2/274 (0%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
R+R G++DPNRP+ SFLF GPTGVGKTELA ALA F + +VRIDMSEYMEKHTVS+
Sbjct: 589 RSRAGLQDPNRPLGSFLFLGPTGVGKTELAKALAEFLFDDDQGIVRIDMSEYMEKHTVSR 648
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E GGQLTEAVR +P+SV+LFDE+EKAH DV NV+LQLLDDGR+TDG+G+
Sbjct: 649 LIGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEVEKAHGDVFNVLLQLLDDGRLTDGQGR 708
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSDQ--MERGVAEELRRRFRPEFLNRIDEVIVFR 182
V+ KNT++I+TSNI +I + G+ Q + V EELR FRPEFLNR+DE+IVF
Sbjct: 709 VVNFKNTVVILTSNIASPLIQELTASGAAQEVLRSRVTEELRLHFRPEFLNRLDEIIVFH 768
Query: 183 QLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGRL 242
L + + IV I + ++ + L + M L ++ K+I++GY+P YGARPL+R I +
Sbjct: 769 PLGQEHIGSIVQIQINKLRDYLAPRKMTLELSQAALNKIIQQGYDPIYGARPLKRVIQQN 828
Query: 243 LEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYR 276
L++ LA IL G + GD V +D D G ++ +
Sbjct: 829 LQNPLAMKILQGALYEGDHVLVDLDPQGQLLFKK 862
>gi|89894414|ref|YP_517901.1| hypothetical protein DSY1668 [Desulfitobacterium hafniense Y51]
gi|89333862|dbj|BAE83457.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 864
Score = 307 bits (786), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 148/274 (54%), Positives = 197/274 (71%), Gaps = 2/274 (0%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
R+R G++DPNRP+ SFLF GPTGVGKTELA ALA F + +VRIDMSEYMEKHTVS+
Sbjct: 589 RSRAGLQDPNRPLGSFLFLGPTGVGKTELAKALAEFLFDDDQGIVRIDMSEYMEKHTVSR 648
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E GGQLTEAVR +P+SV+LFDE+EKAH DV NV+LQLLDDGR+TDG+G+
Sbjct: 649 LIGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEVEKAHGDVFNVLLQLLDDGRLTDGQGR 708
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSDQ--MERGVAEELRRRFRPEFLNRIDEVIVFR 182
V+ KNT++I+TSNI +I + G+ Q + V EELR FRPEFLNR+DE+IVF
Sbjct: 709 VVNFKNTVVILTSNIASPLIQELTASGAAQEVLRSRVTEELRLHFRPEFLNRLDEIIVFH 768
Query: 183 QLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGRL 242
L + + IV I + ++ + L + M L ++ K+I++GY+P YGARPL+R I +
Sbjct: 769 PLGQEHIGSIVQIQINKLRDYLAPRKMTLELSQAALNKIIQQGYDPIYGARPLKRVIQQN 828
Query: 243 LEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYR 276
L++ LA IL G + GD V +D D G ++ +
Sbjct: 829 LQNPLAMKILQGALYEGDHVLVDLDPQGQLLFKK 862
>gi|113474405|ref|YP_720466.1| ATPase [Trichodesmium erythraeum IMS101]
gi|110165453|gb|ABG49993.1| ATPase AAA-2 [Trichodesmium erythraeum IMS101]
Length = 870
Score = 307 bits (786), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 150/267 (56%), Positives = 193/267 (72%), Gaps = 1/267 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRP++SF+F GPTGVGKTEL ALA F +++AMVRIDMSEYMEKH+
Sbjct: 589 AIQRSRAGLADPNRPVASFIFLGPTGVGKTELGKALAAYLFDTEDAMVRIDMSEYMEKHS 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTEA+R RP++VILFDEIEKAH DV N+MLQ+LDDGRVTD
Sbjct: 649 VSRLIGAPPGYVGYDEGGQLTEAIRRRPYTVILFDEIEKAHPDVFNIMLQILDDGRVTDS 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVF 181
+G VD KN++IIMTSNIG I + +QM+ V E LR FRPEFLNRIDE I+F
Sbjct: 709 QGHKVDFKNSVIIMTSNIGSQYIL-DVTDDYEQMQGRVMEALRAAFRPEFLNRIDETIIF 767
Query: 182 RQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGR 241
L K QL EIV + + + +RL + M L +T L + GY+P YGARPL+RAI R
Sbjct: 768 HGLQKEQLREIVQLQVVRLEKRLAERKMSLKLTDAAINFLADVGYDPVYGARPLKRAIQR 827
Query: 242 LLEDNLAEIILTGYIQVGDSVTMDCDS 268
LE +A+ IL GD++ +D ++
Sbjct: 828 ELETQIAKSILRSEFNDGDTIFVDIEN 854
>gi|429503620|ref|YP_007184804.1| Clp protease ATP-binding subunit [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|429485210|gb|AFZ89134.1| Clp protease ATP-binding subunit [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
Length = 810
Score = 307 bits (786), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 147/274 (53%), Positives = 196/274 (71%), Gaps = 9/274 (3%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTGVGKTELA ALA FG +EAM+R+DMSEYMEKH+ S+ GS
Sbjct: 530 GLKDPKRPIGSFIFLGPTGVGKTELARALAESIFGDEEAMIRVDMSEYMEKHSTSRLVGS 589
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG++ GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+L+DGR+TD KG+TVD
Sbjct: 590 PPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDF 649
Query: 129 KNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFLNRIDEVI 179
+NTI+IMTSN+G S + R +G M+ V EL+R FRPEF+NRIDE+I
Sbjct: 650 RNTILIMTSNVGASELKRNKYVGFNVQDESQNHKDMKDKVMGELKRAFRPEFINRIDEII 709
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF L K L +IV +M ++ +RL+ +++ + +T K K+ EEG + YGARPLRRAI
Sbjct: 710 VFHSLEKKHLTDIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAI 769
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
+ +ED L+E +L G I G + +D + G V+
Sbjct: 770 QKHVEDRLSEELLRGNIDKGQHIVLDVEDGEFVV 803
>gi|291563625|emb|CBL42441.1| ATPases with chaperone activity, ATP-binding subunit
[butyrate-producing bacterium SS3/4]
Length = 829
Score = 307 bits (786), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 151/287 (52%), Positives = 197/287 (68%), Gaps = 11/287 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R RVG++DP RPI SFLF GPTGVGKTEL ALA FG++ A++R+DMSEYMEKH+
Sbjct: 529 AIRRGRVGLKDPKRPIGSFLFLGPTGVGKTELCKALAEAMFGTENALIRVDMSEYMEKHS 588
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+E GGQL+E VR P+SVILFDE+EKAH DV N++LQ+LDDG +TD
Sbjct: 589 VSKMIGSPPGYVGYEGGGQLSEKVRRNPYSVILFDEVEKAHPDVFNILLQVLDDGHITDS 648
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
+G +D KNT+IIMTSN G I LG +M+ GV +E++R F+PEF
Sbjct: 649 QGHKIDFKNTVIIMTSNAGAENIIAPRQLGFMSQDDEKVRYQRMKTGVMDEVKRMFKPEF 708
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAK-NMELTVTHTFKKKLIEEGYNPSY 230
LNRID+ IVF L K + EIV I+L + +R + + ++ L K+ L+E+GY+ Y
Sbjct: 709 LNRIDDTIVFHPLTKDHMKEIVTILLNVLAKRTKNQMSIRLNAGDDVKEYLVEKGYDEKY 768
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRH 277
GARPL+R I L+ED LAE++L G ++ GDSV + C G RH
Sbjct: 769 GARPLKRTIQNLIEDKLAELVLEGKVREGDSVKITCKDGELKFSARH 815
>gi|261367173|ref|ZP_05980056.1| ATP-dependent chaperone protein ClpB [Subdoligranulum variabile DSM
15176]
gi|282570767|gb|EFB76302.1| ATP-dependent chaperone protein ClpB [Subdoligranulum variabile DSM
15176]
Length = 870
Score = 307 bits (786), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 147/278 (52%), Positives = 201/278 (72%), Gaps = 8/278 (2%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
R+R GI +PNRPI SFLF GPTGVGKTELA ALA F ++ MVRIDM+EYMEK +VS+
Sbjct: 592 RSRAGIANPNRPIGSFLFLGPTGVGKTELAKALAQALFDDEKNMVRIDMTEYMEKFSVSR 651
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E GGQLTEAVR P+SV+LFDE+EKAH DV N++LQ+LDDGR+TD +G+
Sbjct: 652 LIGAPPGYVGYEEGGQLTEAVRRHPYSVVLFDEVEKAHPDVFNILLQVLDDGRITDSQGR 711
Query: 125 TVDLKNTIIIMTSNIGDSVI--------ARESILGSDQMERGVAEELRRRFRPEFLNRID 176
TVD KNT+II+TSN+G +I A S SD+ + + + L+R+FRPEFLNR+D
Sbjct: 712 TVDFKNTVIILTSNLGSDLILEDLEKSRANGSNELSDEAKNAIDQLLKRQFRPEFLNRLD 771
Query: 177 EVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLR 236
+++ ++ L K ++ IVD+ML ++ RLE K + L VT K +I+ GY+P YGARPL+
Sbjct: 772 DIVYYKSLTKQEIGSIVDLMLTDLRRRLEDKQLHLDVTEAAKNAIIDGGYDPIYGARPLK 831
Query: 237 RAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
R I +E +A+ I+ G GD++T+D D+ G + +
Sbjct: 832 RYIQSHVETMIAKEIIAGAHGAGDTLTVDADNTGRLYL 869
>gi|436669980|ref|YP_007317719.1| ATP-dependent chaperone ClpB [Cylindrospermum stagnale PCC 7417]
gi|428262252|gb|AFZ28201.1| ATP-dependent chaperone ClpB [Cylindrospermum stagnale PCC 7417]
Length = 880
Score = 307 bits (786), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 151/270 (55%), Positives = 195/270 (72%), Gaps = 6/270 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRPI+SF+F GPTGVGKTELA ALA F +++A+VRIDMSEYMEKH
Sbjct: 597 AIQRSRAGLADPNRPIASFIFLGPTGVGKTELAKALAEYLFDTEDALVRIDMSEYMEKHA 656
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG+E GGQLTEA+R RP+SVILFDEIEKAH DV NV+LQ+LDDGR+TD
Sbjct: 657 VARLIGAPPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHPDVFNVLLQILDDGRLTDS 716
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD----QMERGVAEELRRRFRPEFLNRIDE 177
+G+TVD KNTI IMTSNIG I + G D QM V E +R FRPEFLNRIDE
Sbjct: 717 QGRTVDFKNTIAIMTSNIGSIYIL--DVAGDDSKYEQMRDRVMEAVRESFRPEFLNRIDE 774
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I F L K +L EIV + ++ + ERL + + L ++ +++ GY+P YGARPL+R
Sbjct: 775 IIFFHSLRKDELREIVKLQVQRLEERLRERKLLLKISDEALNWIVQVGYDPVYGARPLKR 834
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
AI R LE +A+ IL G GD++ + +
Sbjct: 835 AIQRELETPIAKAILRGEFHEGDTIYVHVE 864
>gi|154684604|ref|YP_001419765.1| ClpC [Bacillus amyloliquefaciens FZB42]
gi|375360776|ref|YP_005128815.1| ATP-dependent Clp protease ATP-binding subunit clpC [Bacillus
amyloliquefaciens subsp. plantarum CAU B946]
gi|384263716|ref|YP_005419423.1| class III stress response-related ATPase ClpC [Bacillus
amyloliquefaciens subsp. plantarum YAU B9601-Y2]
gi|387896613|ref|YP_006326909.1| Clp protease ATP-binding subunit [Bacillus amyloliquefaciens Y2]
gi|394994757|ref|ZP_10387464.1| ClpC [Bacillus sp. 916]
gi|451348524|ref|YP_007447155.1| Clp protease ATP-binding subunit [Bacillus amyloliquefaciens IT-45]
gi|452854149|ref|YP_007495832.1| class III stress response-related ATPase, AAA+ superfamily
[Bacillus amyloliquefaciens subsp. plantarum UCMB5036]
gi|154350455|gb|ABS72534.1| ClpC [Bacillus amyloliquefaciens FZB42]
gi|371566770|emb|CCF03620.1| ATP-dependent Clp protease ATP-binding subunit clpC [Bacillus
amyloliquefaciens subsp. plantarum CAU B946]
gi|380497069|emb|CCG48107.1| class III stress response-related ATPase ClpC [Bacillus
amyloliquefaciens subsp. plantarum YAU B9601-Y2]
gi|387170723|gb|AFJ60184.1| Clp protease ATP-binding subunit [Bacillus amyloliquefaciens Y2]
gi|393804324|gb|EJD65736.1| ClpC [Bacillus sp. 916]
gi|449852282|gb|AGF29274.1| Clp protease ATP-binding subunit [Bacillus amyloliquefaciens IT-45]
gi|452078409|emb|CCP20159.1| class III stress response-related ATPase, AAA+ superfamily
[Bacillus amyloliquefaciens subsp. plantarum UCMB5036]
Length = 810
Score = 307 bits (786), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 147/274 (53%), Positives = 196/274 (71%), Gaps = 9/274 (3%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTGVGKTELA ALA FG +EAM+R+DMSEYMEKH+ S+ GS
Sbjct: 530 GLKDPKRPIGSFIFLGPTGVGKTELARALAESIFGDEEAMIRVDMSEYMEKHSTSRLVGS 589
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG++ GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+L+DGR+TD KG+TVD
Sbjct: 590 PPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDF 649
Query: 129 KNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFLNRIDEVI 179
+NTI+IMTSN+G S + R +G M+ V EL+R FRPEF+NRIDE+I
Sbjct: 650 RNTILIMTSNVGASELKRNKYVGFNVQDESQNHKDMKDKVMGELKRAFRPEFINRIDEII 709
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF L K L +IV +M ++ +RL+ +++ + +T K K+ EEG + YGARPLRRAI
Sbjct: 710 VFHSLEKKHLTDIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAI 769
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
+ +ED L+E +L G I G + +D + G V+
Sbjct: 770 QKHVEDRLSEELLRGNIDKGQHIVLDVEDGEFVV 803
>gi|386812609|ref|ZP_10099834.1| chaperone ClpB [planctomycete KSU-1]
gi|386404879|dbj|GAB62715.1| chaperone ClpB [planctomycete KSU-1]
Length = 869
Score = 307 bits (786), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 145/270 (53%), Positives = 201/270 (74%), Gaps = 5/270 (1%)
Query: 3 LERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTV 62
+ RAR G++DPNRP+ FLF GPTGVGKTEL ALA F ++ AMVRIDMSE+ME H+V
Sbjct: 590 IRRARAGLQDPNRPMGVFLFLGPTGVGKTELCKALAAFLFDNENAMVRIDMSEFMESHSV 649
Query: 63 SKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGK 122
++ G+PPGYVG+E GG+LTEA+R RP+SVILFDEIEKAHRDV N++LQ+ DDGR+TDG
Sbjct: 650 ARLIGAPPGYVGYEEGGRLTEAIRRRPYSVILFDEIEKAHRDVFNILLQVFDDGRLTDGH 709
Query: 123 GQTVDLKNTIIIMTSNIGDSVIARESILG---SDQMERGVAEELRRRFRPEFLNRIDEVI 179
G+TVD KNTII+MTSNI I + + G +++ + + L+ FRPEFLNRIDE+I
Sbjct: 710 GRTVDFKNTIIVMTSNIASQWI--QDLTGPENEEELRSRIKQALKEVFRPEFLNRIDEII 767
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
+F L+ + +I +I LKE+ +RL N++LT+T K+KL++EGY+P +GARPL+R I
Sbjct: 768 IFHGLSIDLIKQIANIQLKELQKRLNKYNLQLTITDGVKEKLVQEGYDPHFGARPLKRTI 827
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
+++E+ L+ IL G + G + +D ++G
Sbjct: 828 QQMIENPLSIEILEGKLTEGSEIKVDMNNG 857
>gi|312144275|ref|YP_003995721.1| ATPase AAA-2 domain-containing protein [Halanaerobium
hydrogeniformans]
gi|311904926|gb|ADQ15367.1| ATPase AAA-2 domain protein [Halanaerobium hydrogeniformans]
Length = 817
Score = 307 bits (786), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 150/275 (54%), Positives = 192/275 (69%), Gaps = 10/275 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA LA F ++AM+R+DMSEYMEKH+VS+
Sbjct: 525 RARAGLKDPKRPIGSFIFLGPTGVGKTELAKTLAETMFNDEDAMIRVDMSEYMEKHSVSR 584
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPGYVG + GGQLTE VR RP+SV+LFDEIEKAH DV NV+LQ+L+DG +TD G+
Sbjct: 585 LVGSPPGYVGHDEGGQLTEPVRRRPYSVVLFDEIEKAHPDVFNVLLQILEDGVLTDTHGR 644
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEFLNR 174
VD KNTI+IMTSN+G I ++S LG + M+ V +LR+ FRPEFLNR
Sbjct: 645 KVDFKNTIVIMTSNVGADFIEKQSKLGFKTENDEQSNYESMKDNVITQLRKTFRPEFLNR 704
Query: 175 IDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARP 234
+DE+IVF LNK + +I D+ML ++ ERL K ME+ +T K KL E+GY+ +GARP
Sbjct: 705 LDEIIVFHALNKEHIKQIADLMLDDLRERLNEKEMEIEITEAAKDKLAEDGYDSEFGARP 764
Query: 235 LRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
LRR I R +E+ L+ IL I + +D G
Sbjct: 765 LRRTIQRQIENELSIKILDKEIGENSKIKIDVVDG 799
>gi|218245816|ref|YP_002371187.1| ATP-dependent chaperone ClpB [Cyanothece sp. PCC 8801]
gi|257058862|ref|YP_003136750.1| ATP-dependent chaperone ClpB [Cyanothece sp. PCC 8802]
gi|218166294|gb|ACK65031.1| ATP-dependent chaperone ClpB [Cyanothece sp. PCC 8801]
gi|256589028|gb|ACU99914.1| ATP-dependent chaperone ClpB [Cyanothece sp. PCC 8802]
Length = 872
Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 150/271 (55%), Positives = 193/271 (71%), Gaps = 6/271 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRP +SF+F GPTGVGKTELA ALA F ++EA+VRIDMSEYMEKH
Sbjct: 589 AIQRSRAGLSDPNRPTASFIFLGPTGVGKTELAKALAKNLFDTEEALVRIDMSEYMEKHA 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTEA+R RP+SVILFDEIEKAH DV NVMLQ+LDDGR+TD
Sbjct: 649 VSRLLGAPPGYVGYDEGGQLTEAIRRRPYSVILFDEIEKAHNDVFNVMLQILDDGRLTDA 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD----QMERGVAEELRRRFRPEFLNRIDE 177
+G VD KNTIIIMTSNIG I + G D +M V E + FRPEFLNRIDE
Sbjct: 709 QGHVVDFKNTIIIMTSNIGSQYIL--DVAGDDSRYEEMRSRVMEAMTNSFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+F L K QL EI+ + + + RL + + L ++ + E GY+P YGARPL+R
Sbjct: 767 IIIFHGLQKSQLREIIKLQVALLETRLSEQKIYLKLSEEALDFVAEIGYDPVYGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDS 268
AI + LE +A+ IL G + GD++ +D ++
Sbjct: 827 AIQKYLETAIAKSILRGEFKAGDTIFVDVEA 857
>gi|421733018|ref|ZP_16172133.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus amyloliquefaciens subsp. plantarum M27]
gi|407073059|gb|EKE46057.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus amyloliquefaciens subsp. plantarum M27]
Length = 811
Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 147/274 (53%), Positives = 196/274 (71%), Gaps = 9/274 (3%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTGVGKTELA ALA FG +EAM+R+DMSEYMEKH+ S+ GS
Sbjct: 531 GLKDPKRPIGSFIFLGPTGVGKTELARALAESIFGDEEAMIRVDMSEYMEKHSTSRLVGS 590
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG++ GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+L+DGR+TD KG+TVD
Sbjct: 591 PPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDF 650
Query: 129 KNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFLNRIDEVI 179
+NTI+IMTSN+G S + R +G M+ V EL+R FRPEF+NRIDE+I
Sbjct: 651 RNTILIMTSNVGASELKRNKYVGFNVQDESQNHKDMKDKVMGELKRAFRPEFINRIDEII 710
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF L K L +IV +M ++ +RL+ +++ + +T K K+ EEG + YGARPLRRAI
Sbjct: 711 VFHSLEKKHLTDIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAI 770
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
+ +ED L+E +L G I G + +D + G V+
Sbjct: 771 QKHVEDRLSEELLRGNIDKGQHIVLDVEDGEFVV 804
>gi|228995472|ref|ZP_04155141.1| Negative regulator of genetic competence [Bacillus mycoides
Rock3-17]
gi|229003095|ref|ZP_04160946.1| Negative regulator of genetic competence [Bacillus mycoides
Rock1-4]
gi|228758155|gb|EEM07349.1| Negative regulator of genetic competence [Bacillus mycoides
Rock1-4]
gi|228764276|gb|EEM13154.1| Negative regulator of genetic competence [Bacillus mycoides
Rock3-17]
Length = 811
Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 147/274 (53%), Positives = 197/274 (71%), Gaps = 9/274 (3%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+RIDMSEYMEKH+ S+ GS
Sbjct: 531 GLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGS 590
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG+E GGQLTE VR +P+SV+L DE+EKAH DV N++LQ+L+DGR+TD KG+TVD
Sbjct: 591 PPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDF 650
Query: 129 KNTIIIMTSNIGDSVIARESILGSD---------QMERGVAEELRRRFRPEFLNRIDEVI 179
+NTI+IMTSN+G + R LG + M+ V +EL++ FRPEFLNRIDE+I
Sbjct: 651 RNTIVIMTSNVGAEALKRNKHLGFNVQDESRDYSDMKGKVMDELKKAFRPEFLNRIDEII 710
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF L K + EIV +M+ ++ RL+ + +EL +T T + + ++G++ YGARPLRRAI
Sbjct: 711 VFHMLEKKHIQEIVTLMVNQLVNRLKEQEIELELTSTAIESIADKGFDREYGARPLRRAI 770
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
+ +ED L+E +L G I+ G V D + VI
Sbjct: 771 QKHVEDRLSEELLKGAIEKGQKVVFDAEGESFVI 804
>gi|440229579|ref|YP_007343372.1| ATP-dependent chaperone ClpB [Serratia marcescens FGI94]
gi|440051284|gb|AGB81187.1| ATP-dependent chaperone ClpB [Serratia marcescens FGI94]
Length = 857
Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 148/268 (55%), Positives = 195/268 (72%), Gaps = 1/268 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F S +AMVRIDMSE+MEKH+
Sbjct: 583 AIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALASFLFDSDDAMVRIDMSEFMEKHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARE-SILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT++IMTSN+G +I + QM+ V E + FRPEF+NRIDEV+V
Sbjct: 703 QGRTVDFRNTVVIMTSNLGSDLIQEHFGQMNYAQMKESVMEMVGHHFRPEFINRIDEVVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L + + I I L +Y+RLE + E+T+T + L + GY+P YGARPL+RAI
Sbjct: 763 FHPLGQKHIAAIAKIQLDRLYQRLEERGYEVTITEPALELLGKTGYDPVYGARPLKRAIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDS 268
+ +E+ LA+ IL+G + G VT+D ++
Sbjct: 823 QEIENPLAQQILSGELVPGKPVTLDVEN 850
>gi|386774044|ref|ZP_10096422.1| ATPase with chaperone activity, ATP-binding subunit
[Brachybacterium paraconglomeratum LC44]
Length = 862
Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 145/279 (51%), Positives = 204/279 (73%), Gaps = 10/279 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R R G++DP RP SF+F GPTGVGKTELA ALA FG +EA++++DMSE+ EKHT
Sbjct: 527 AIRRTRAGLKDPKRPGGSFIFAGPTGVGKTELAKALAEFLFGDEEALIQLDMSEFGEKHT 586
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ FGSPPGYVG++ GGQLTE VR +P SV+LFDE+EKAH D+ N +LQ+L+DGR+TD
Sbjct: 587 ASRLFGSPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHVDIFNSLLQILEDGRLTDS 646
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
+G+ VD KNTIIIMT+N+G IA+ +G ++M+ V EEL++ F+PEF
Sbjct: 647 QGRVVDFKNTIIIMTTNLGTRDIAKGVSMGFTAGGDLSTDYERMKSKVHEELKQHFKPEF 706
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNR+D+V+VF QL++ ++++IVD+ + ++ RL+ ++M L +T K L E+GY+P G
Sbjct: 707 LNRVDDVVVFPQLSRTEIIQIVDLEVAKLSRRLQDRDMTLELTQPAKDLLAEKGYDPVLG 766
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGG 270
ARPLRR I R +ED+L+E IL G +QVGD + +D + G
Sbjct: 767 ARPLRRTIQRDIEDSLSERILFGQVQVGDQIVVDAEGEG 805
>gi|354557532|ref|ZP_08976790.1| ATP-dependent chaperone ClpB [Desulfitobacterium metallireducens
DSM 15288]
gi|353550326|gb|EHC19763.1| ATP-dependent chaperone ClpB [Desulfitobacterium metallireducens
DSM 15288]
Length = 863
Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 145/271 (53%), Positives = 202/271 (74%), Gaps = 2/271 (0%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP+RP+ SFLF GPTGVGKTELA ALA F ++A+VRIDMSEYMEKHTVS+
Sbjct: 589 RARAGLQDPDRPLGSFLFLGPTGVGKTELAKALAEFLFDDEQAIVRIDMSEYMEKHTVSR 648
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E GGQLTEAVR +P+SV+LFDEIEKAHRDV NV+LQLLDDGR+TDG+G+
Sbjct: 649 LIGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHRDVFNVLLQLLDDGRLTDGQGR 708
Query: 125 TVDLKNTIIIMTSNIGDSVIAR--ESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVFR 182
V+ KNT++I+TSNI I S G +++ V EEL+ FRPEFLNR+D++IVF
Sbjct: 709 VVNFKNTVVILTSNIASPAIQEMNRSSAGQEEIRTRVTEELKNYFRPEFLNRLDDIIVFN 768
Query: 183 QLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGRL 242
L + + +IV+I L+++++RL + + + ++ + ++ +EGY+P YGARPL+R I +
Sbjct: 769 PLGQEHIGKIVEIQLQQLHDRLAERKLIIKLSDKARGQIAQEGYDPIYGARPLKRVIQQR 828
Query: 243 LEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
L++ LA +L G + G + +D + G+ I
Sbjct: 829 LQNPLAMKLLQGEFKEGQQIHVDFNPEGHFI 859
>gi|403388385|ref|ZP_10930442.1| ATPase AAA-2 domain-containing protein [Clostridium sp. JC122]
Length = 867
Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 154/269 (57%), Positives = 197/269 (73%), Gaps = 14/269 (5%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DPNRPI SF+F GPTGVGKTELA LA F S+E +VRIDMSEYMEK++VS+
Sbjct: 593 RARAGLKDPNRPIGSFIFLGPTGVGKTELAKTLARNLFDSEENIVRIDMSEYMEKYSVSR 652
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G PPGYVG+E GGQLTEAVR P+SVILFDEIEKAH DV N+ LQ+LDDGR+TD KG+
Sbjct: 653 LIGPPPGYVGYEEGGQLTEAVRRNPYSVILFDEIEKAHEDVFNIFLQILDDGRLTDNKGK 712
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAE--------ELRRRFRPEFLNRID 176
TVD KNTIIIMTSN+G S L +Q E G++E E++ RF+PEFLNR+D
Sbjct: 713 TVDFKNTIIIMTSNLGSSY------LLENQDESGISEDARNAVMNEMKLRFKPEFLNRLD 766
Query: 177 EVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLR 236
++I+F+ L+ + +I+DI LK++ RL +N+ L VT K L +EGY+P YGARPL+
Sbjct: 767 DIIMFKPLSGEGIKKIIDIFLKDVRIRLSDRNITLQVTDYAKDILAKEGYDPVYGARPLK 826
Query: 237 RAIGRLLEDNLAEIILTGYIQVGDSVTMD 265
R IG +LE +A +I++G I G V +D
Sbjct: 827 RYIGNVLETKIARMIISGEIYDGCIVLVD 855
>gi|150019935|ref|YP_001305289.1| ATPase [Thermosipho melanesiensis BI429]
gi|149792456|gb|ABR29904.1| ATPase AAA-2 domain protein [Thermosipho melanesiensis BI429]
Length = 818
Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 148/279 (53%), Positives = 200/279 (71%), Gaps = 11/279 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++ RAR G++DP RP+ FLF GPTGVGKTELA LA FG ++A++R DMSEYMEK +
Sbjct: 523 SIRRARSGLKDPRRPVGVFLFLGPTGVGKTELAKTLAEYLFGDEKALIRFDMSEYMEKFS 582
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTE VR RP SVILFDEIEKAH DV N++LQ++DDGR+TD
Sbjct: 583 VSRLIGAPPGYVGYEEGGTLTEKVRRRPFSVILFDEIEKAHPDVFNLLLQIMDDGRLTDS 642
Query: 122 KGQTVDLKNTIIIMTSNI-GDSVIARESILG----------SDQMERGVAEELRRRFRPE 170
+G VD +NTIIIMTSNI G+ +++ + LG +M+ V EE+++ FRPE
Sbjct: 643 QGHVVDFRNTIIIMTSNIGGNQIVSSKKTLGFVNSENLNAEFKEMKSKVLEEVKKTFRPE 702
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNRIDE++VF +L + + EI+DI+LK+I RLE K ++L +T K L++EGY+P+Y
Sbjct: 703 FLNRIDEIVVFHKLTEKHIREIIDILLKDIRRRLEEKGLKLELTKNAKDFLVQEGYDPAY 762
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
GARPL+R I R +ED L+E +L G + D + + G
Sbjct: 763 GARPLKRTIQRYIEDPLSEELLKGKFKENDVIVCAFERG 801
>gi|219668839|ref|YP_002459274.1| ATP-dependent chaperone ClpB [Desulfitobacterium hafniense DCB-2]
gi|219539099|gb|ACL20838.1| ATP-dependent chaperone ClpB [Desulfitobacterium hafniense DCB-2]
Length = 864
Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 148/274 (54%), Positives = 197/274 (71%), Gaps = 2/274 (0%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
R+R G++DPNRP+ SFLF GPTGVGKTELA ALA F + +VRIDMSEYMEKHTVS+
Sbjct: 589 RSRAGLQDPNRPLGSFLFLGPTGVGKTELAKALAEFLFDDDQGIVRIDMSEYMEKHTVSR 648
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E GGQLTEAVR +P+SV+LFDE+EKAH DV NV+LQLLDDGR+TDG+G+
Sbjct: 649 LIGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEVEKAHGDVFNVLLQLLDDGRLTDGQGR 708
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSDQ--MERGVAEELRRRFRPEFLNRIDEVIVFR 182
V+ KNT++I+TSNI +I + G+ Q + V EELR FRPEFLNR+DE+IVF
Sbjct: 709 VVNFKNTVVILTSNIASPLIQELTASGAAQEVLRSRVTEELRLHFRPEFLNRLDEIIVFH 768
Query: 183 QLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGRL 242
L + + IV I + ++ + L + M L ++ K+I++GY+P YGARPL+R I +
Sbjct: 769 PLGQEHIGSIVQIQINKLRDYLAPRKMTLELSQGALNKIIQQGYDPIYGARPLKRVIQQN 828
Query: 243 LEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYR 276
L++ LA IL G + GD V +D D G ++ +
Sbjct: 829 LQNPLAMKILQGILHEGDHVLVDLDPQGQLLFKK 862
>gi|406671491|ref|ZP_11078730.1| hypothetical protein HMPREF9706_00990 [Facklamia hominis CCUG
36813]
gi|405580741|gb|EKB54800.1| hypothetical protein HMPREF9706_00990 [Facklamia hominis CCUG
36813]
Length = 828
Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 145/270 (53%), Positives = 194/270 (71%), Gaps = 9/270 (3%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++ P RPI SFLF GPTGVGKTELA LA FGSK+ M+R+DMSEYMEKH V++ GS
Sbjct: 545 GLKSPQRPIGSFLFLGPTGVGKTELAKTLAQSMFGSKDHMIRVDMSEYMEKHAVARLIGS 604
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG++ GQLTE VR +P+SVIL DE+EKAH DV N++LQ+ DDG++TDGKG+TVD
Sbjct: 605 PPGYVGYDEAGQLTEKVRQKPYSVILLDEVEKAHPDVFNILLQVFDDGQLTDGKGRTVDF 664
Query: 129 KNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFLNRIDEVI 179
++TIIIMTSNIG + + + +G D M++ V EEL+R FRPEFLNRIDE +
Sbjct: 665 RHTIIIMTSNIGATALRDDKAVGFGAVDYSDDYDAMKKRVLEELKRAFRPEFLNRIDETL 724
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF L+K + +IV + EI +RL ++ +T T + + G++P YGARP+RRAI
Sbjct: 725 VFHSLDKKAIRQIVKLQAHEIVDRLAQMEIKARMTDTAVDIIAKAGFDPEYGARPIRRAI 784
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
+ +ED L+E++L G IQ+GD +T+ SG
Sbjct: 785 QKQIEDQLSEMLLAGDIQLGDQITIGGRSG 814
>gi|296271367|ref|YP_003653999.1| ATPase AAA-2 domain-containing protein [Thermobispora bispora DSM
43833]
gi|296094154|gb|ADG90106.1| ATPase AAA-2 domain protein [Thermobispora bispora DSM 43833]
Length = 834
Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 147/280 (52%), Positives = 202/280 (72%), Gaps = 10/280 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R R G++DP RP SF+F GP+GVGKTEL+ ALA FG ++A++ +DMSEYMEKHT
Sbjct: 527 AIRRTRAGLKDPRRPGGSFIFAGPSGVGKTELSKALAEFLFGDEDALIMLDMSEYMEKHT 586
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ FGSPPGYVG+E GGQLTE VR +P SV+LFDEIEKAH D+ N +LQ+L+DGR+TD
Sbjct: 587 VSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHPDIFNSLLQILEDGRLTDA 646
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
+G+ VD KNT+IIMT+N+G I++ +G D+M+ V EEL++ FRPEF
Sbjct: 647 QGRVVDFKNTVIIMTTNLGTRDISKGIGVGFAKSDDTETTYDRMKAKVQEELKQHFRPEF 706
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNR+D+++VF QL + ++++IVD+M+ + ERL+ ++M L +T KK L E GY+P G
Sbjct: 707 LNRVDDIVVFHQLTQKEIIQIVDLMIARVDERLKDRDMGLVLTDAAKKLLAERGYDPVMG 766
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGN 271
ARPLRR I R +ED L+E IL G ++ G V +D + G
Sbjct: 767 ARPLRRTIQREIEDTLSEKILYGELRPGHIVKVDVEGEGE 806
>gi|188534765|ref|YP_001908562.1| protein disaggregation chaperone [Erwinia tasmaniensis Et1/99]
gi|188029807|emb|CAO97688.1| Chaperone ClpB [Erwinia tasmaniensis Et1/99]
Length = 859
Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 147/269 (54%), Positives = 194/269 (72%), Gaps = 1/269 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F S +AMVRIDMSE+MEKH+
Sbjct: 583 AIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA-RESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT++IMTSN+G +I R L +M+ V + FRPEF+NRIDE++V
Sbjct: 703 QGRTVDFRNTVVIMTSNLGSDLIQERFGALSYGEMKELVMSVVSHSFRPEFINRIDELVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L + + I I L+ +Y+RLE + L ++ ++L E GY+P YGARPL+RAI
Sbjct: 763 FHPLGEQHIASIARIQLQRLYQRLEERGYTLHISDAALQQLAENGYDPVYGARPLKRAIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
+ +E+ LA+ IL+G +Q G + MD G
Sbjct: 823 QQIENPLAQQILSGALQPGKIIEMDVKDG 851
>gi|385653550|ref|ZP_10048103.1| ATP-dependent Clp protease, ATP-binding subunit [Leucobacter
chromiiresistens JG 31]
Length = 841
Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 145/277 (52%), Positives = 204/277 (73%), Gaps = 9/277 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
T+ R R G++DP RP SF+F GPTGVGKTELA ALA F ++A++ +DMSEY EKHT
Sbjct: 529 TIRRQRAGLKDPKRPSGSFIFAGPTGVGKTELAKALAEFLFDDEDALISLDMSEYGEKHT 588
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ FG+PPG+VGFE GGQLTE VR +P SV+LFDEIEKAH D+ N +LQ+L++GR+TDG
Sbjct: 589 VSRLFGAPPGFVGFEEGGQLTEKVRRKPFSVVLFDEIEKAHPDIFNSLLQILEEGRLTDG 648
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA---------RESILGSDQMERGVAEELRRRFRPEFL 172
+G+ +D KNT+IIMT+N+G + IA +S +G D M+ V EEL++ F+PEFL
Sbjct: 649 QGRVIDFKNTVIIMTTNLGSTAIAGGPVGFQIEGDSSVGYDMMKGKVNEELKKHFKPEFL 708
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NR+D+ IVF QL K +L++IVD+ +K++ +RL ++M + ++ +++L E GY+P+ GA
Sbjct: 709 NRVDDTIVFPQLTKPELLQIVDLFVKQLKDRLLDRDMHIEISTAARERLAEVGYDPTLGA 768
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
RPLRRA+ R +ED L+E IL+ + GD V +D G
Sbjct: 769 RPLRRAMQREIEDRLSERILSAELLAGDLVKVDFVDG 805
>gi|381398100|ref|ZP_09923508.1| ATPase AAA-2 domain protein [Microbacterium laevaniformans OR221]
gi|380774766|gb|EIC08062.1| ATPase AAA-2 domain protein [Microbacterium laevaniformans OR221]
Length = 841
Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 152/285 (53%), Positives = 205/285 (71%), Gaps = 11/285 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
T+ R R G++DP RP SF+F GPTGVGKTELA ALA F + A++ +DMSE+ EKHT
Sbjct: 532 TIRRQRAGLKDPKRPSGSFIFAGPTGVGKTELAKALAEFLFDDEGALISLDMSEFGEKHT 591
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ FG+PPG+VGFE GGQLTE VR +P SV+LFDEIEKAH D+ N +LQ+L++GR+TDG
Sbjct: 592 VSRLFGAPPGFVGFEEGGQLTEKVRRKPFSVVLFDEIEKAHPDIFNSLLQILEEGRLTDG 651
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARE----SILGSDQ-----MERGVAEELRRRFRPEFL 172
+G+ VD KNT+IIMT+N+G S IA + G+ Q M+ V EEL+R F+PEFL
Sbjct: 652 QGRVVDFKNTVIIMTTNLGSSAIAGGPVGFQVEGNSQTTYERMKGKVDEELKRHFKPEFL 711
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NR+D+VIVF QLNK +L +IV + K + ERL ++M + +T K +LIE G++P+ GA
Sbjct: 712 NRVDDVIVFPQLNKQELRQIVGLFTKRLSERLLDRDMTVELTDAAKDRLIEIGFDPTLGA 771
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRH 277
RPLRRA+ R +ED L+E IL G + GD V +D ++G ++ H
Sbjct: 772 RPLRRAMQREVEDQLSERILHGELNPGDHVKVDAENG--TFLFEH 814
>gi|258512699|ref|YP_003186133.1| ATPase AAA-2 domain-containing protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257479425|gb|ACV59744.1| ATPase AAA-2 domain protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 812
Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 148/273 (54%), Positives = 198/273 (72%), Gaps = 7/273 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++A++RIDMSEYME+H+
Sbjct: 522 AIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEALFGDEDALIRIDMSEYMERHS 581
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG+E GGQLTE VR +P+SV+L DEIEKAH +V N++LQ+LDDGR+TDG
Sbjct: 582 TSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLDDGRLTDG 641
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQ-------MERGVAEELRRRFRPEFLNR 174
KG+TVD +NT+IIMTSN+G + + LG + M+ V +EL+R FRPEFLNR
Sbjct: 642 KGRTVDFRNTVIIMTSNVGAEELRKGGALGFKREEDKYLGMKDKVMDELKRTFRPEFLNR 701
Query: 175 IDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARP 234
IDE+IVF L++ + IVD M+ + RL+ + +E +T KK L + G++P YGARP
Sbjct: 702 IDEIIVFHPLDETHIERIVDKMVDNLKRRLKEQEIEFELTDEAKKFLAKVGFDPQYGARP 761
Query: 235 LRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
L+RAI R +ED L+ ++ G I+ GD V + D
Sbjct: 762 LQRAIVRNVEDLLSSALIAGEIKKGDRVLLGVD 794
>gi|228989289|ref|ZP_04149281.1| Negative regulator of genetic competence [Bacillus pseudomycoides
DSM 12442]
gi|228770442|gb|EEM19014.1| Negative regulator of genetic competence [Bacillus pseudomycoides
DSM 12442]
Length = 811
Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 147/274 (53%), Positives = 197/274 (71%), Gaps = 9/274 (3%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+RIDMSEYMEKH+ S+ GS
Sbjct: 531 GLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGS 590
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG+E GGQLTE VR +P+SV+L DE+EKAH DV N++LQ+L+DGR+TD KG+TVD
Sbjct: 591 PPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDF 650
Query: 129 KNTIIIMTSNIGDSVIARESILGSD---------QMERGVAEELRRRFRPEFLNRIDEVI 179
+NTI+IMTSN+G + R LG + M+ V +EL++ FRPEFLNRIDE+I
Sbjct: 651 RNTIVIMTSNVGAEALKRNKHLGFNVQDESRDYSDMKGKVMDELKKAFRPEFLNRIDEII 710
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF L K + EIV +M+ ++ RL+ + +EL +T T + + ++G++ YGARPLRRAI
Sbjct: 711 VFHMLEKKHIQEIVTLMVNQLVNRLKEQEIELELTSTAIEAIADKGFDREYGARPLRRAI 770
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
+ +ED L+E +L G I+ G V D + VI
Sbjct: 771 QKHVEDRLSEELLKGAIEKGQKVVFDAEGESFVI 804
>gi|172056511|ref|YP_001812971.1| ATP-dependent chaperone ClpB [Exiguobacterium sibiricum 255-15]
gi|171989032|gb|ACB59954.1| ATP-dependent chaperone ClpB [Exiguobacterium sibiricum 255-15]
Length = 857
Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 149/272 (54%), Positives = 195/272 (71%), Gaps = 4/272 (1%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR GI+DPNRPI SFLF GPTGVGKTELA ALA F S+E +VRIDMSEYMEKH VS+
Sbjct: 586 RARAGIKDPNRPIGSFLFLGPTGVGKTELAKALAAAMFDSEEHIVRIDMSEYMEKHNVSR 645
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E GGQLTEAVR P+SV+LFDEIEKAH DV N++LQ+LDDGR+TD +G+
Sbjct: 646 LVGAPPGYVGYEEGGQLTEAVRRSPYSVLLFDEIEKAHGDVFNILLQVLDDGRLTDAQGR 705
Query: 125 TVDLKNTIIIMTSNIGDSVI---ARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVF 181
VD KNTI+IMTSNIG ++ A++ + + + E V +EL++ FRPEFLNRID+ I+F
Sbjct: 706 VVDFKNTIVIMTSNIGSHILLEAAKDGDIDAAE-EEAVRQELKKYFRPEFLNRIDDTILF 764
Query: 182 RQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGR 241
L++ ++ I+D + ++ ERL + + + VT K + E + P YGARP+ R I R
Sbjct: 765 HPLHRAEIERIIDKAVSKMAERLSGREITIDVTEAAKTLIFNEAFEPQYGARPINRYIQR 824
Query: 242 LLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
+E LA +++G IQ G V +D D VI
Sbjct: 825 TIETKLARALISGSIQDGSHVAIDTDGTELVI 856
>gi|15644143|ref|NP_229192.1| ATP-dependent Clp protease, ATPase subunit [Thermotoga maritima
MSB8]
gi|418045448|ref|ZP_12683543.1| ATPase AAA-2 domain protein [Thermotoga maritima MSB8]
gi|4981954|gb|AAD36462.1|AE001792_2 ATP-dependent Clp protease, ATPase subunit [Thermotoga maritima
MSB8]
gi|351676333|gb|EHA59486.1| ATPase AAA-2 domain protein [Thermotoga maritima MSB8]
Length = 791
Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 152/269 (56%), Positives = 197/269 (73%), Gaps = 3/269 (1%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
T+ RARVGI++P RPI FLF GPTGVGKTELA LA FGS++AM+R+DMSEYMEKH+
Sbjct: 520 TIRRARVGIKNPRRPIGVFLFLGPTGVGKTELARTLADVLFGSEDAMIRLDMSEYMEKHS 579
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG+E GGQLTEAVR RP+SVIL DEIEKAH DV N++LQ+ +DGR+TDG
Sbjct: 580 VARLIGAPPGYVGYEEGGQLTEAVRKRPYSVILLDEIEKAHPDVFNILLQVFEDGRLTDG 639
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVF 181
KG TVD +NTIIIMTSNIG I + + + + +ELR F+PEFLNRID ++ F
Sbjct: 640 KGNTVDFRNTIIIMTSNIGSEKILE---MSENGVRIEIEKELRNTFKPEFLNRIDAIVYF 696
Query: 182 RQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGR 241
+ L ++ +IV+IM++++ E L+ KN+ + +T K+ L E GY PS GARPLRR I
Sbjct: 697 KPLTMEEVKKIVEIMVRQLQEILKEKNISIELTERAKEYLAEAGYVPSLGARPLRRIIEL 756
Query: 242 LLEDNLAEIILTGYIQVGDSVTMDCDSGG 270
LE +A+ IL G I+ GD V +D D G
Sbjct: 757 ELESMIADKILEGEIKEGDRVLVDADEYG 785
>gi|403047553|ref|ZP_10903021.1| stress response-related Clp ATPase [Staphylococcus sp. OJ82]
gi|402763087|gb|EJX17181.1| stress response-related Clp ATPase [Staphylococcus sp. OJ82]
Length = 820
Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 148/272 (54%), Positives = 196/272 (72%), Gaps = 9/272 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSDQMERG---------VAEELRRRFRPEFLNRI 175
VD +NT+IIMTSN+G + + G G + +EL+ FRPEFLNR+
Sbjct: 646 RVDFRNTVIIMTSNVGAQELQDQRFAGFGGASEGQDYETIRNTMMKELKNAFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D+ IVF +L+K +L EIV +M+ ++ +RL +++ + VT K+K+ EEGY+P YGARPL
Sbjct: 706 DDTIVFHKLSKEELKEIVTMMINKLTDRLSEQDINIEVTDAAKEKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RAI + +EDNL+E+IL G G V +D D
Sbjct: 766 IRAIQKTVEDNLSELILDGNQIEGKKVEIDHD 797
>gi|300857273|ref|YP_003782257.1| ATPase [Clostridium ljungdahlii DSM 13528]
gi|300437388|gb|ADK17155.1| predicted ATPase with chaperone activity [Clostridium ljungdahlii
DSM 13528]
Length = 813
Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 146/262 (55%), Positives = 197/262 (75%), Gaps = 12/262 (4%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RARVG++DP RPI SF+F GPTGVGKTEL+ ALA FG + M+RIDMSEYMEKHTVS+
Sbjct: 529 RARVGLKDPKRPIGSFIFLGPTGVGKTELSKALAEAMFGDENNMIRIDMSEYMEKHTVSR 588
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPGYVG++ GGQLTE VR P+SV+LFDEIEKAH +V N++LQ+L+DGR+TDGKG+
Sbjct: 589 LIGSPPGYVGYDEGGQLTEKVRRNPYSVVLFDEIEKAHPEVFNILLQILEDGRLTDGKGK 648
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG------------SDQMERGVAEELRRRFRPEFL 172
T++ KNTIIIMTSN+G + I ++ +G ++M+ + EEL+ FRPEFL
Sbjct: 649 TINFKNTIIIMTSNVGAATIRKQKSMGFTAAKGDDKESQYEKMKDNIMEELKNSFRPEFL 708
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRID++IVF QL + L +IV +MLK++ RL+ + +E+ T ++ L +EG++ +YGA
Sbjct: 709 NRIDDIIVFHQLEEEDLKQIVKLMLKDVSSRLKDQEIEIGFTDKAQELLAKEGFDLTYGA 768
Query: 233 RPLRRAIGRLLEDNLAEIILTG 254
RPLRRAI + +ED L+E +L G
Sbjct: 769 RPLRRAITKTVEDKLSEEMLRG 790
>gi|291542191|emb|CBL15301.1| ATPases with chaperone activity, ATP-binding subunit [Ruminococcus
bromii L2-63]
Length = 821
Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 152/281 (54%), Positives = 201/281 (71%), Gaps = 13/281 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R RVG++DP RP+ SF+F GPTGVGKTEL ALA FG + AM+R+DMSEYMEKHT
Sbjct: 531 AIRRGRVGLKDPKRPVGSFIFLGPTGVGKTELCKALAEAMFGDENAMLRLDMSEYMEKHT 590
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVGFE GGQLTE VR +P+SV+LFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 591 VSKLIGSPPGYVGFEEGGQLTEKVRRKPYSVVLFDEIEKAHPDVFNMLLQILEDGRLTDS 650
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA-RESILG------------SDQMERGVAEELRRRFR 168
+G+TVD KNTIIIMTSN+G +I ++S LG ++ V ELR+ FR
Sbjct: 651 QGRTVDFKNTIIIMTSNVGARLITEKQSSLGFNSENENAEESEKKDIKELVTGELRKVFR 710
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNR+D++IVF +LNK ++ +I MLK + RL+ N++++ T K+ ++G++
Sbjct: 711 PEFLNRVDDIIVFNKLNKDEIKQIAVKMLKTLENRLDKMNIKISFTDNAVSKIADKGFDE 770
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
+YGARPLRRAI +ED L+E +L G ++ G VT D G
Sbjct: 771 NYGARPLRRAIQNEIEDPLSEQMLEGKVKDGAVVTCDFADG 811
>gi|134298058|ref|YP_001111554.1| ATPase [Desulfotomaculum reducens MI-1]
gi|134050758|gb|ABO48729.1| ATPase AAA-2 domain protein [Desulfotomaculum reducens MI-1]
Length = 812
Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 151/283 (53%), Positives = 203/283 (71%), Gaps = 11/283 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RP+ SF+F GPTGVGKTELA ALA FG ++A+VRIDMSEYMEKH
Sbjct: 527 AVRRARAGLKDPKRPVGSFIFLGPTGVGKTELARALAESLFGDEDALVRIDMSEYMEKHA 586
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTEAVR +P+SV+L DEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 587 VSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDS 646
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG-----SDQ-----MERGVAEELRRRFRPEF 171
+G+ VD +NT+IIMTSN+G S I +G DQ M+ V E L+R FRPEF
Sbjct: 647 RGRVVDFRNTVIIMTSNVGLSTIKSVGKVGFAATAQDQADYEKMKERVEEGLKRTFRPEF 706
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNRIDE IVF L + + +IVD+ML+E+ +R+E + L+ T K+ L + GY+ YG
Sbjct: 707 LNRIDETIVFHPLTREHIQQIVDLMLQEVAQRMEEHEVYLSFTEGAKEILAQVGYSEEYG 766
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
ARPLRR I R +ED+L+E ++ G + G+ V + + GG +I+
Sbjct: 767 ARPLRREIQRRVEDHLSEELIKGTFKKGERVVIGAE-GGQIIV 808
>gi|427717076|ref|YP_007065070.1| ATP-dependent chaperone ClpB [Calothrix sp. PCC 7507]
gi|427349512|gb|AFY32236.1| ATP-dependent chaperone ClpB [Calothrix sp. PCC 7507]
Length = 871
Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 150/269 (55%), Positives = 192/269 (71%), Gaps = 6/269 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRPI+SF+F GPTGVGKTELA ALA F +++A+VRIDMSEYMEKH
Sbjct: 589 AIQRSRAGLADPNRPIASFIFLGPTGVGKTELAKALAAYMFDTEDALVRIDMSEYMEKHA 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEA+R RP++VILFDEIEKAH DV N+ LQ+LDDGRVTD
Sbjct: 649 VSRLIGAPPGYVGYEEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNIFLQILDDGRVTDA 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS----DQMERGVAEELRRRFRPEFLNRIDE 177
+G VD KN IIIMTSNIG I + G D+M+ V E +R FRPEFLNRIDE
Sbjct: 709 QGHKVDFKNAIIIMTSNIGSQYIL--DVAGDDSSYDEMQHRVMEAMRNSFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+F L K +L IV + + + +RL + M L ++ + L E GY+P +GARPL+R
Sbjct: 767 IIIFHTLQKQELRRIVLLQVDRLRKRLTDRKMSLKLSDSALDFLAEVGYDPVFGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
AI R LE +A+ IL G GD++ +D
Sbjct: 827 AIQRELETQIAKAILRGDFNDGDTIFVDV 855
>gi|385267113|ref|ZP_10045200.1| ATPase AAA-2 domain-containing protein [Bacillus sp. 5B6]
gi|385151609|gb|EIF15546.1| ATPase AAA-2 domain-containing protein [Bacillus sp. 5B6]
Length = 811
Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 147/274 (53%), Positives = 196/274 (71%), Gaps = 9/274 (3%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTGVGKTELA ALA FG +EAM+R+DMSEYMEKH+ S+ GS
Sbjct: 531 GLKDPKRPIGSFIFLGPTGVGKTELARALAESIFGDEEAMIRVDMSEYMEKHSTSRLVGS 590
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG++ GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+L+DGR+TD KG+TVD
Sbjct: 591 PPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDF 650
Query: 129 KNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFLNRIDEVI 179
+NTI+IMTSN+G S + R +G M+ V EL+R FRPEF+NRIDE+I
Sbjct: 651 RNTILIMTSNVGASELKRNKYVGFNVQDESQNHKDMKDKVMGELKRAFRPEFINRIDEII 710
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF L K L +IV +M ++ +RL+ +++ + +T K K+ EEG + YGARPLRRAI
Sbjct: 711 VFHSLEKKHLTDIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAI 770
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
+ +ED L+E +L G I G + +D + G V+
Sbjct: 771 QKHVEDRLSEELLRGNIDKGQHIVLDVEDGEFVV 804
>gi|403071334|ref|ZP_10912666.1| ATP-dependent Clp protease [Oceanobacillus sp. Ndiop]
Length = 809
Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 147/282 (52%), Positives = 202/282 (71%), Gaps = 9/282 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA F +EAM+RIDMSEYME+H
Sbjct: 526 AIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEVMFADEEAMIRIDMSEYMERHA 585
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG+E GGQLTE VR +P+SV+L DEIEKAH +V N++LQ+L+DGR+TD
Sbjct: 586 TSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDS 645
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD---------QMERGVAEELRRRFRPEFL 172
KG+ VD +NT+IIMTSN+G S + R +G + +M+ V EEL++ FRPEFL
Sbjct: 646 KGRLVDFRNTVIIMTSNVGASELKRNKYVGFNLGEENKDYKEMKSKVMEELKKAFRPEFL 705
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE IVF L K + +IV +ML+++ RL+ +++ L++T +K+ EG++P YGA
Sbjct: 706 NRIDETIVFHSLEKEHMKDIVTLMLEQLQRRLKGQDIHLSLTDKAVEKIANEGFDPEYGA 765
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
RPLRR+I + +ED L+E +L I G +V + ++ G I+
Sbjct: 766 RPLRRSIQKNIEDLLSEELLKESISKGQNVKIGLNNKGEFIV 807
>gi|443325328|ref|ZP_21054028.1| ATP-dependent chaperone ClpB [Xenococcus sp. PCC 7305]
gi|442795057|gb|ELS04444.1| ATP-dependent chaperone ClpB [Xenococcus sp. PCC 7305]
Length = 871
Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 151/270 (55%), Positives = 195/270 (72%), Gaps = 6/270 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DP+RP +SF+F GPTGVGKTELA ALA F S++A+VRIDMSEYMEKH
Sbjct: 589 AIQRSRAGLADPDRPTASFIFLGPTGVGKTELAKALAKNLFDSEDALVRIDMSEYMEKHN 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEA+R RP+SVILFDEIEKAH DV N+MLQ+LDDGR+TD
Sbjct: 649 VSRLVGAPPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHGDVFNIMLQILDDGRLTDS 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD----QMERGVAEELRRRFRPEFLNRIDE 177
+G+TVD KN+IIIMTSNIG I + G D +M V ++ FRPEFLNRIDE
Sbjct: 709 QGRTVDFKNSIIIMTSNIGSQHIL--DVAGDDSKYEEMRSRVMGAMQDSFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+F L K QL IV + ++ + +RL + + L ++ L E GY+P YGARPL+R
Sbjct: 767 IIIFHSLTKEQLQPIVKLQVQALEKRLAEQKLALKLSDAAVDFLSELGYDPVYGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
AI R LE +A+ IL G Q GD++ +D +
Sbjct: 827 AIQRYLETAIAKAILRGEFQGGDTIFVDVE 856
>gi|384136760|ref|YP_005519474.1| ATPase [Alicyclobacillus acidocaldarius subsp. acidocaldarius
Tc-4-1]
gi|339290845|gb|AEJ44955.1| ATPase AAA-2 domain protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length = 812
Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 148/273 (54%), Positives = 198/273 (72%), Gaps = 7/273 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++A++RIDMSEYME+H+
Sbjct: 522 AIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEALFGDEDALIRIDMSEYMERHS 581
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG+E GGQLTE VR +P+SV+L DEIEKAH +V N++LQ+LDDGR+TDG
Sbjct: 582 TSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLDDGRLTDG 641
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQ-------MERGVAEELRRRFRPEFLNR 174
KG+TVD +NT+IIMTSN+G + + LG + M+ V +EL+R FRPEFLNR
Sbjct: 642 KGRTVDFRNTVIIMTSNVGAEELRKGGALGFKREEDKYLGMKDKVMDELKRTFRPEFLNR 701
Query: 175 IDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARP 234
IDE+IVF L++ + IVD M+ + RL+ + +E +T KK L + G++P YGARP
Sbjct: 702 IDEIIVFHPLDETHIERIVDKMVDNLKRRLKEQEIEFELTDEAKKFLAKVGFDPQYGARP 761
Query: 235 LRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
L+RAI R +ED L+ ++ G I+ GD V + D
Sbjct: 762 LQRAIVRNVEDLLSSALIAGEIKKGDRVLLGVD 794
>gi|288554696|ref|YP_003426631.1| class III stress response-related ATPase [Bacillus pseudofirmus
OF4]
gi|288545856|gb|ADC49739.1| class III stress response-related ATPase [Bacillus pseudofirmus
OF4]
Length = 813
Score = 306 bits (785), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 149/282 (52%), Positives = 195/282 (69%), Gaps = 9/282 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA A+A FG ++A++RIDMSEYMEKH S+
Sbjct: 528 RARAGLKDPKRPIGSFIFLGPTGVGKTELARAVAETLFGDEDAVIRIDMSEYMEKHATSR 587
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPGYVG E+GGQLTE VR +P+SVIL DEIEKAH +V N++LQ+L+DGR+TD KG+
Sbjct: 588 LVGSPPGYVGHEDGGQLTEKVRRKPYSVILLDEIEKAHPEVFNILLQVLEDGRLTDSKGR 647
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFLNRI 175
TVD +NT IIMTSN+G S + R LG M+ V EL+R FRPEFLNRI
Sbjct: 648 TVDFRNTAIIMTSNVGASTLKRNKYLGFTTESEGQEYKDMKGKVMAELKRSFRPEFLNRI 707
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
DE+IVF L K + EI+ +M ++ +RL+ + ++ +T K K+ + GY+P YGARPL
Sbjct: 708 DEIIVFHSLEKKHVREIITLMADQLKQRLKEQGIDFELTEAAKDKITDLGYDPEYGARPL 767
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRH 277
RRA+ + +ED L+E +L G I G +D V+ R
Sbjct: 768 RRALQKQVEDRLSEELLKGTIFKGQKAIIDVKDDELVVETRE 809
>gi|220927785|ref|YP_002504694.1| ATPase AAA [Clostridium cellulolyticum H10]
gi|219998113|gb|ACL74714.1| ATPase AAA-2 domain protein [Clostridium cellulolyticum H10]
Length = 810
Score = 306 bits (784), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 147/286 (51%), Positives = 204/286 (71%), Gaps = 12/286 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R RVG++DP RP+ SF+F GPTGVGKTEL ALA FG +++M+R+DMSE+MEKH+
Sbjct: 525 AIRRGRVGLKDPKRPVGSFIFMGPTGVGKTELCKALAEAMFGDEKSMIRVDMSEFMEKHS 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG++ GGQLTE VR +P+SV+LFDEIEKAH D+ N++LQ+L+DGR+TD
Sbjct: 585 VSKLVGSPPGYVGYDEGGQLTERVRRKPYSVLLFDEIEKAHPDIFNILLQILEDGRLTDS 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG-----------SDQMERGVAEELRRRFRPE 170
+G+ VD +NTIIIMTSN+G I LG + M+ V EL++ FRPE
Sbjct: 645 QGRVVDFRNTIIIMTSNVGARTITEPKRLGFSASNDESAKNYEDMKSNVMSELKKMFRPE 704
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNRID++IVF L+K + EIV +ML + RL+A + + V+ L ++G++P +
Sbjct: 705 FLNRIDDIIVFHPLSKENIKEIVRLMLDVLVNRLKANEIIMEVSEEAMGYLAQKGFDPVF 764
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYR 276
GARPLRRAI ++ED LAE +L G ++ GDS+ +D D G N+++ +
Sbjct: 765 GARPLRRAIQSMVEDKLAEDMLEGKVKAGDSIRIDLD-GENIVVIK 809
>gi|335998580|ref|ZP_08564491.1| ATP-binding Clp protease subunit [Lactobacillus ruminis SPM0211]
gi|335348435|gb|EGM49941.1| ATP-binding Clp protease subunit [Lactobacillus ruminis SPM0211]
Length = 834
Score = 306 bits (784), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 144/277 (51%), Positives = 202/277 (72%), Gaps = 9/277 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G+ DP RPI SF+F GPTGVGKTELA ALA FGS++AM+RIDMSEYMEK++
Sbjct: 533 AIRRARSGLSDPTRPIGSFMFLGPTGVGKTELAKALAEAMFGSEDAMIRIDMSEYMEKYS 592
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ G+PPGYVG++ GGQLTE VR++P+SV+L DE+EKAH DV N++LQ+LDDG +TD
Sbjct: 593 TSRLIGAPPGYVGYDEGGQLTEKVRNKPYSVVLLDEVEKAHPDVFNILLQVLDDGYLTDS 652
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---SD------QMERGVAEELRRRFRPEFL 172
KG+ V+ +NTIIIMTSN+G + + E +G +D M + E L++RFRPEFL
Sbjct: 653 KGRKVNFRNTIIIMTSNLGATALRDEKSVGFGATDLSNDYAAMSSKIRESLKKRFRPEFL 712
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE+++F L K +L +IV +M K++ +R+ + ++L VT + + + G++P YGA
Sbjct: 713 NRIDEIVIFHSLEKDELHQIVKLMAKDVIKRIAEQKVKLKVTPAAIEVVAKAGFDPEYGA 772
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
RP+RRA+ +ED L+E +L G IQ+GD+VT+ G
Sbjct: 773 RPIRRALQTEVEDLLSEALLQGKIQIGDTVTIGAKKG 809
>gi|239916715|ref|YP_002956273.1| ATPase with chaperone activity, ATP-binding subunit [Micrococcus
luteus NCTC 2665]
gi|281414827|ref|ZP_06246569.1| ATPase with chaperone activity, ATP-binding subunit [Micrococcus
luteus NCTC 2665]
gi|239837922|gb|ACS29719.1| ATPase with chaperone activity, ATP-binding subunit [Micrococcus
luteus NCTC 2665]
Length = 851
Score = 306 bits (784), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 144/280 (51%), Positives = 202/280 (72%), Gaps = 10/280 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R R G++DPNRP SF+F GPTGVGKTELA +LA FG ++A++ +DMSE+ EKHT
Sbjct: 535 AIRRTRAGLKDPNRPSGSFIFAGPTGVGKTELAKSLAEFLFGDEDALITLDMSEFQEKHT 594
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ FG+PPGYVG+E GGQLTE VR RP SV+LFDE+EKAH+D+ N +LQ+L+DGR+TD
Sbjct: 595 VSRLFGAPPGYVGYEEGGQLTEKVRRRPFSVVLFDEVEKAHQDLFNSLLQILEDGRLTDS 654
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR----------ESILGSDQMERGVAEELRRRFRPEF 171
+G+ VD KNT+IIMT+N+G I++ ++ G ++M+ V EELR+ FRPEF
Sbjct: 655 QGRVVDFKNTVIIMTTNLGTRDISKGVMTGFQSATDTTTGYERMKGKVKEELRQHFRPEF 714
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNR+D+VIVF QL K +++EIVD+ + + RL +++ + +T + K L + GY+P+ G
Sbjct: 715 LNRVDDVIVFPQLQKHEIVEIVDLFVARLGRRLAEQDLSIELTQSAKDLLADRGYDPAMG 774
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGN 271
ARPLRR I +++ED L+E IL G I G +T+D G
Sbjct: 775 ARPLRRTIQQMVEDQLSEKILFGEIPAGSLITVDATGEGE 814
>gi|219847263|ref|YP_002461696.1| ATP-dependent chaperone ClpB [Chloroflexus aggregans DSM 9485]
gi|219541522|gb|ACL23260.1| ATP-dependent chaperone ClpB [Chloroflexus aggregans DSM 9485]
Length = 861
Score = 306 bits (784), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 150/273 (54%), Positives = 199/273 (72%), Gaps = 2/273 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DPNRP+ SFLF GPTGVGKTELA ALA F ++AMVRIDMSEYMEKH+
Sbjct: 585 AVRRARAGLQDPNRPLGSFLFLGPTGVGKTELARALAEFLFDDEQAMVRIDMSEYMEKHS 644
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG++ GGQLTEAVR +P+SV+LFDEIEKAH DV NV+LQ+LDDGR+TDG
Sbjct: 645 VARLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRLTDG 704
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQME--RGVAEELRRRFRPEFLNRIDEVI 179
+G+ V+ KNT+IIMTSNI + I + G+ Q E V EELR RPEFLNRIDEVI
Sbjct: 705 QGRVVNFKNTVIIMTSNIASATIQELARAGAPQGEIRAAVMEELRSVLRPEFLNRIDEVI 764
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF L++ + +IV+I L + + L + + LT+T + +L EGY+P YGARPL+R I
Sbjct: 765 VFSPLSREHIDQIVEIQLNRLRKLLADRKLNLTLTDAARAQLAAEGYDPVYGARPLKRVI 824
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
+ +++ LA +L G G ++ +D ++G V
Sbjct: 825 QQRIQNPLALQLLQGAFPEGSTIIVDVENGNFV 857
>gi|268593139|ref|ZP_06127360.1| ATP-dependent chaperone protein ClpB [Providencia rettgeri DSM
1131]
gi|291311412|gb|EFE51865.1| ATP-dependent chaperone protein ClpB [Providencia rettgeri DSM
1131]
Length = 857
Score = 306 bits (784), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 148/268 (55%), Positives = 197/268 (73%), Gaps = 1/268 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SF+F GPTGVGKTEL ALA F S +AMVRIDMSE+MEKH
Sbjct: 583 AIRRSRAGLSDPNRPIGSFMFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHA 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA-RESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT+IIMTSN+G +I R ++G +M+ V E + FRPEF+NRIDEV+V
Sbjct: 703 QGRTVDFRNTVIIMTSNLGSDLIQERFGMIGYSEMKDMVMEVVSHSFRPEFINRIDEVVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L K Q+ I +I L +Y+RLE E++ T +K+ E G++P +GARPL+RAI
Sbjct: 763 FHPLGKEQITNIANIQLARLYKRLEEHGYEVSATPAALEKIGEAGFDPIFGARPLKRAIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDS 268
+ +E+ LA+ IL+G + G V +D ++
Sbjct: 823 QEIENPLAQEILSGKLLPGKPVVLDVEN 850
>gi|352094640|ref|ZP_08955811.1| ATP-dependent chaperone ClpB [Synechococcus sp. WH 8016]
gi|351680980|gb|EHA64112.1| ATP-dependent chaperone ClpB [Synechococcus sp. WH 8016]
Length = 863
Score = 306 bits (784), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 149/268 (55%), Positives = 194/268 (72%), Gaps = 8/268 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPN+PI+SFLF GPTGVGKTEL+ ALA + F S++A+VRIDMSEYMEKHT
Sbjct: 589 AIQRSRAGLSDPNQPIASFLFLGPTGVGKTELSKALAAQLFDSEDALVRIDMSEYMEKHT 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEA+R RP++VILFDE+EKAH DV NVMLQ+LDDGRVTDG
Sbjct: 649 VSRLIGAPPGYVGYEAGGQLTEAIRRRPYAVILFDEVEKAHPDVFNVMLQILDDGRVTDG 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD-----QMERGVAEELRRRFRPEFLNRID 176
+G+TVD N ++I+TSNIG I LG D +ME V + LR FRPEFLNRID
Sbjct: 709 QGRTVDFTNAVLILTSNIGSQSILD---LGGDDNQHQEMESRVNDALRSHFRPEFLNRID 765
Query: 177 EVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLR 236
+ I+F L + +L IV + ++ + +RL + + L ++ L GY+P YGARPL+
Sbjct: 766 DTIIFHSLRRDELRLIVALQVERLRQRLSERKLGLNISEEATDWLANAGYDPVYGARPLK 825
Query: 237 RAIGRLLEDNLAEIILTGYIQVGDSVTM 264
RAI R LE +A+ IL G + G SV +
Sbjct: 826 RAIQRELETPIAKAILAGAYEEGSSVQI 853
>gi|404372678|ref|ZP_10977973.1| hypothetical protein CSBG_00014 [Clostridium sp. 7_2_43FAA]
gi|404301168|gb|EEH96388.2| hypothetical protein CSBG_00014 [Clostridium sp. 7_2_43FAA]
Length = 812
Score = 306 bits (784), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 140/284 (49%), Positives = 211/284 (74%), Gaps = 13/284 (4%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RARVG++DPNRPI +F+F GPTGVGKTEL+NALA FG K+ ++RIDMSEYMEKH+V++
Sbjct: 529 RARVGLKDPNRPIGTFIFCGPTGVGKTELSNALAEAMFGDKKNLIRIDMSEYMEKHSVAR 588
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGY+G + GGQLTEAVR P+SVIL DEIEKAH DV N++LQ+++DGR+TD KG+
Sbjct: 589 LIGAPPGYIGHDEGGQLTEAVRRNPYSVILLDEIEKAHPDVFNILLQIMEDGRLTDSKGK 648
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG-----------SDQMERGVAEELRRRFRPEFLN 173
++ KNTI+IMTSN+G I +++ LG ++M++ + EE++++F+PEF+N
Sbjct: 649 IINFKNTIVIMTSNVGAHDIKKQNTLGFSASNSLVDSEYEKMKKNIMEEIKQQFKPEFIN 708
Query: 174 RIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGAR 233
RID++IVF +L +++IV++ML ++L+ + + + + K+ L+ +G + +YGAR
Sbjct: 709 RIDDIIVFHKLEDSDILKIVNLMLNNTIDKLKDRKITINLNEESKRFLVNKGVDTNYGAR 768
Query: 234 PLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRH 277
PLRR I + LED L+E +L GYI+ GD++ + C+ G + ++H
Sbjct: 769 PLRRIITKELEDKLSEEMLKGYIKGGDNLEVYCN--GEELYFKH 810
>gi|261346206|ref|ZP_05973850.1| ATP-dependent chaperone protein ClpB [Providencia rustigianii DSM
4541]
gi|282565512|gb|EFB71047.1| ATP-dependent chaperone protein ClpB [Providencia rustigianii DSM
4541]
Length = 857
Score = 306 bits (784), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 148/268 (55%), Positives = 197/268 (73%), Gaps = 1/268 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SF+F GPTGVGKTEL ALA F S +AMVRIDMSE+MEKH
Sbjct: 583 AIRRSRAGLSDPNRPIGSFMFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHA 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA-RESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT+IIMTSN+G +I R ++ +M+ V E + FRPEF+NRIDEV+V
Sbjct: 703 QGRTVDFRNTVIIMTSNLGSDLIQERFGMIDYSEMKNMVMEVVSHNFRPEFINRIDEVVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L K Q+ I +I L +Y+RLE E+T T +K+ E G++P +GARPL+RAI
Sbjct: 763 FHPLGKEQIANIANIQLARLYKRLEEHGYEVTATAAALEKIGEAGFDPIFGARPLKRAIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDS 268
+ +E+ LA+ IL+G + G +T+D ++
Sbjct: 823 QEIENPLAQEILSGKLIPGKPITLDVEN 850
>gi|338812538|ref|ZP_08624710.1| ATP-dependent chaperone ClpB [Acetonema longum DSM 6540]
gi|337275468|gb|EGO63933.1| ATP-dependent chaperone ClpB [Acetonema longum DSM 6540]
Length = 866
Score = 306 bits (784), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 150/266 (56%), Positives = 195/266 (73%), Gaps = 8/266 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR GI+DP RPI SF+F GPTGVGKTELA AL+ F + +M+RIDMSEYMEKHTVS+
Sbjct: 590 RARAGIKDPQRPIGSFIFLGPTGVGKTELAKALSEVLFDDERSMIRIDMSEYMEKHTVSR 649
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGY+G++ GGQLTEAVR RP+SVIL DE+EKAH DV N++LQ+LDDGR+TDGKG+
Sbjct: 650 LVGAPPGYIGYDEGGQLTEAVRRRPYSVILLDEVEKAHSDVFNILLQILDDGRLTDGKGR 709
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSD--QMERGVAEELRRRFRPEFLNRIDEVIVFR 182
TVD KNT++IMTSNIG + IL D + V E ++R FRPEFLNRID++IVF
Sbjct: 710 TVDFKNTVVIMTSNIGS-----QEILNGDFAAAKERVLEMMKRHFRPEFLNRIDDIIVFN 764
Query: 183 QLNKMQLMEIVDIMLKEIYERLEAK-NMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGR 241
LN+ Q+ I ++L+ + ERL+ + N+ L+ L ++GY+P+YGARPLRR IGR
Sbjct: 765 ALNRDQVASIAGLLLQSLGERLKKQLNITLSWDSDTLNLLAKQGYDPNYGARPLRRLIGR 824
Query: 242 LLEDNLAEIILTGYIQVGDSVTMDCD 267
L+E L++ I+ G I G V + D
Sbjct: 825 LVETELSKKIVKGEIPEGSHVALHAD 850
>gi|315649734|ref|ZP_07902818.1| ATPase AAA-2 domain protein [Paenibacillus vortex V453]
gi|315274922|gb|EFU38298.1| ATPase AAA-2 domain protein [Paenibacillus vortex V453]
Length = 818
Score = 306 bits (784), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 153/292 (52%), Positives = 208/292 (71%), Gaps = 13/292 (4%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RP+ SF+F GPTGVGKTELA ALA FG + A+VRIDMSEYMEKH+ S+
Sbjct: 526 RARAGLKDPKRPMGSFIFLGPTGVGKTELARALAEAMFGDENAVVRIDMSEYMEKHSTSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E GGQLTE VR +P+SV+L DEIEKAH +V N++LQ+L+DGR+TD KG+
Sbjct: 586 LVGAPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG----SDQ------MERGVAEELRRRFRPEFLNR 174
VD +NT+II+TSN+G I + S LG SD M+ V +EL++ FRPEFLNR
Sbjct: 646 VVDFRNTLIILTSNVGAEAIKKNSTLGFTAVSDSGRDYNNMKGKVMDELKKSFRPEFLNR 705
Query: 175 IDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARP 234
IDE+IVF L + + EIV +M E+ +RL ++ +T K + +EGY+P++GARP
Sbjct: 706 IDEIIVFHSLEEKHIAEIVTLMSDELRKRLLEFEVQFELTDKAKTFIAKEGYDPAFGARP 765
Query: 235 LRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMTVCA 286
LRRAI + +ED L+E +L G I GDS+ +D +G V+ ++N S+T +
Sbjct: 766 LRRAIQKHIEDRLSEELLRGNITKGDSLIIDEANGELVV---NKNESVTAAS 814
>gi|311070733|ref|YP_003975656.1| ClpC protein [Bacillus atrophaeus 1942]
gi|419823202|ref|ZP_14346762.1| ClpC protein [Bacillus atrophaeus C89]
gi|310871250|gb|ADP34725.1| ClpC [Bacillus atrophaeus 1942]
gi|388472733|gb|EIM09496.1| ClpC protein [Bacillus atrophaeus C89]
Length = 812
Score = 306 bits (784), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 148/274 (54%), Positives = 196/274 (71%), Gaps = 9/274 (3%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTGVGKTELA ALA FG +EAM+RIDMSEYMEKH+ S+ GS
Sbjct: 530 GLKDPKRPIGSFVFLGPTGVGKTELARALAESIFGDEEAMIRIDMSEYMEKHSTSRLVGS 589
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG++ GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+L+DGR+TD KG+TVD
Sbjct: 590 PPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDF 649
Query: 129 KNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFLNRIDEVI 179
+NTI+IMTSN+G S + R +G M+ V EL+R FRPEF+NRIDE+I
Sbjct: 650 RNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEII 709
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF L K L EIV +M ++ +RL+ +++ + +T K K+ +EG + YGARPLRRAI
Sbjct: 710 VFHSLEKKHLNEIVTLMSDQLTKRLKEQDLSIELTEAAKAKVADEGVDLEYGARPLRRAI 769
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
+ +ED L+E +L G I G + +D + G V+
Sbjct: 770 QKHVEDRLSEELLRGNIDKGQHIVLDVEDGEFVV 803
>gi|157369131|ref|YP_001477120.1| protein disaggregation chaperone [Serratia proteamaculans 568]
gi|157320895|gb|ABV39992.1| ATPase AAA-2 domain protein [Serratia proteamaculans 568]
Length = 857
Score = 306 bits (784), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 148/267 (55%), Positives = 195/267 (73%), Gaps = 1/267 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F S +AMVRIDMSE+MEKH+
Sbjct: 583 AIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALASFLFDSDDAMVRIDMSEFMEKHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARE-SILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT++IMTSN+G +I + QM+ V E + FRPEF+NRIDEV+V
Sbjct: 703 QGRTVDFRNTVVIMTSNLGSDLIQEHFGQMNYAQMKESVMEMVTHHFRPEFINRIDEVVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L + + EI I L +Y+RLE + E+T+T + L + G++P YGARPL+RAI
Sbjct: 763 FHPLGQKHIAEIAKIQLARLYKRLEERGYEVTMTEPALELLGKTGFDPVYGARPLKRAIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCD 267
+ +E+ LA+ IL+G + G VT+D +
Sbjct: 823 QEIENPLAQQILSGKLIPGKLVTLDVE 849
>gi|406669840|ref|ZP_11077103.1| hypothetical protein HMPREF9707_01006 [Facklamia ignava CCUG 37419]
gi|405581810|gb|EKB55819.1| hypothetical protein HMPREF9707_01006 [Facklamia ignava CCUG 37419]
Length = 832
Score = 306 bits (784), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 148/286 (51%), Positives = 202/286 (70%), Gaps = 9/286 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RA G+++PNRPI SFLF GPTGVGKTELA ALA FGS++ M+R+DMSEYMEKH+
Sbjct: 547 AIRRAYSGLKNPNRPIGSFLFLGPTGVGKTELAKALAATIFGSEDNMIRVDMSEYMEKHS 606
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ GSPPGYVG++ GQLTE VR++P+SVIL DE+EKAH DV N++LQ DDG +TDG
Sbjct: 607 VSRLVGSPPGYVGYDEAGQLTEKVRNKPYSVILLDEVEKAHPDVFNILLQAFDDGHMTDG 666
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+ VD +NTI IMTSN+G + + + +G D M + EE+++ FRPEF+
Sbjct: 667 KGRRVDFRNTIFIMTSNLGATALRDDKSVGFGAVDYSNDYDAMAARIHEEVKKTFRPEFI 726
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE IVF+ L+K ++ EIV + +EI RLE + VT T + + G++P YGA
Sbjct: 727 NRIDETIVFKPLSKEEIREIVKLQAQEIINRLEDLEISARVTDTAVDIIADAGFDPEYGA 786
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHR 278
RP+RRAI + +ED L+E++L+G I++GD +T+ SG I R +
Sbjct: 787 RPIRRAIQKQIEDELSEMLLSGAIELGDQITIGGRSGAININNRSK 832
>gi|379012281|ref|YP_005270093.1| chaperone protein ClpB [Acetobacterium woodii DSM 1030]
gi|375303070|gb|AFA49204.1| chaperone protein ClpB [Acetobacterium woodii DSM 1030]
Length = 867
Score = 306 bits (784), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 148/274 (54%), Positives = 204/274 (74%), Gaps = 5/274 (1%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
R+R GI++PN PI SFLF GPTGVGKTELA A+A F S+E M+RIDMSEYMEK +VS+
Sbjct: 594 RSRAGIKNPNSPIGSFLFLGPTGVGKTELAKAVAATLFDSEENMIRIDMSEYMEKFSVSR 653
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E GGQLTEAVR +P+SVIL DEIEKAH+DV N++LQ+LDDGR+TD +G+
Sbjct: 654 LIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHKDVFNILLQILDDGRITDSQGR 713
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG----SDQMERGVAEELRRRFRPEFLNRIDEVIV 180
TVD KNTIIIMTSNIG + E I +++ E V E L+ FRPEFLNRIDE+++
Sbjct: 714 TVDFKNTIIIMTSNIGSEYLL-EGINADGEITEKTEAAVMELLKGYFRPEFLNRIDEIVL 772
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
++ LNK + EIV ++LKE+ +RLE + + +T+T +I+ G++P+YGARPL+R +
Sbjct: 773 YKPLNKAAIREIVMLLLKELQKRLEERRITVTLTPKAIDAVIDMGFDPAYGARPLKRYLQ 832
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
+ +E + + I+ G + G ++T+D D+ G+ M
Sbjct: 833 KHIETMVGKEIIKGNVHEGQNITIDVDANGDFYM 866
>gi|443312779|ref|ZP_21042394.1| ATP-dependent chaperone ClpB [Synechocystis sp. PCC 7509]
gi|442777235|gb|ELR87513.1| ATP-dependent chaperone ClpB [Synechocystis sp. PCC 7509]
Length = 876
Score = 306 bits (784), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 149/271 (54%), Positives = 196/271 (72%), Gaps = 6/271 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRP +SF+F GPTGVGKTELA A+A F ++EA+VRIDMSEYMEKH
Sbjct: 588 AIQRSRAGLADPNRPTASFIFLGPTGVGKTELAKAIAAYLFDTEEALVRIDMSEYMEKHA 647
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTEA+R RP++VILFDEIEKAH DV N+MLQ+LDDGRVTD
Sbjct: 648 VSRLIGAPPGYVGYDEGGQLTEALRRRPYAVILFDEIEKAHPDVFNIMLQILDDGRVTDA 707
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS----DQMERGVAEELRRRFRPEFLNRIDE 177
+G TVD KN+IIIMTSNIG I + G D+M R V E +R FRPEFLNRIDE
Sbjct: 708 QGHTVDFKNSIIIMTSNIGSQYIL--DLAGDDSQYDEMYRRVMEAMRGSFRPEFLNRIDE 765
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
I+F L K +L +IV + + + +RL + + L ++ + L E GY+P +GARPL+R
Sbjct: 766 TIIFHALQKNELRQIVQLQVVRLADRLSDRKISLKLSDSALDFLAEVGYDPVFGARPLKR 825
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDS 268
AI + LE +A+ IL G GD++ +D ++
Sbjct: 826 AIQKELETQIAKAILRGEFHDGDTIFVDVEN 856
>gi|302390927|ref|YP_003826747.1| ATPase AAA [Acetohalobium arabaticum DSM 5501]
gi|302203004|gb|ADL11682.1| ATPase AAA-2 domain protein [Acetohalobium arabaticum DSM 5501]
Length = 813
Score = 306 bits (784), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 147/279 (52%), Positives = 200/279 (71%), Gaps = 11/279 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA LA F +EAM+RIDMSEYMEKH VS+
Sbjct: 530 RARAGLKDPKRPIGSFIFLGPTGVGKTELAKTLAEAMFDDEEAMIRIDMSEYMEKHAVSR 589
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG E GGQLTE VR +P SVIL DEIEKAH +V N++LQ+L+DG++TD +G+
Sbjct: 590 LVGAPPGYVGHEEGGQLTEQVRRQPFSVILLDEIEKAHPEVFNMLLQVLEDGQLTDSQGR 649
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG-----------SDQMERGVAEELRRRFRPEFLN 173
TVD KNTIIIMTSN+G ++I +S +G +M+ V EL+++FRPEFLN
Sbjct: 650 TVDFKNTIIIMTSNVGANLIENQSGVGFTPSEKNAETSYQRMKEKVTSELKKQFRPEFLN 709
Query: 174 RIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGAR 233
R+DE IVF L + EI+D+ML+E++ERL+ K + + VT K+ + E+G++ +GAR
Sbjct: 710 RLDETIVFHALELEHIKEIIDLMLEEVFERLDEKEITIEVTDDAKEVIAEKGFDKEFGAR 769
Query: 234 PLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
PL+R I R++E+ L+E ++ G GD + +D D N+
Sbjct: 770 PLKRTIRRMMENPLSEKLIAGEFSDGDHIVVDVDEEENL 808
>gi|266621305|ref|ZP_06114240.1| negative regulator of genetic competence ClpC/MecB [Clostridium
hathewayi DSM 13479]
gi|288867045|gb|EFC99343.1| negative regulator of genetic competence ClpC/MecB [Clostridium
hathewayi DSM 13479]
Length = 816
Score = 306 bits (784), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 155/272 (56%), Positives = 195/272 (71%), Gaps = 11/272 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R RVG++DP RPI SFLF GPTGVGKTEL+ ALA FG++ A++R+DMSEYMEKH+
Sbjct: 526 AIRRGRVGLKDPKRPIGSFLFLGPTGVGKTELSKALAEAMFGTENALIRVDMSEYMEKHS 585
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG++ GGQL+E VR P+SVILFDEIEKAH DV N++LQ+LDDG +TD
Sbjct: 586 VSKMIGSPPGYVGYDEGGQLSEKVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDA 645
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----SDQ------MERGVAEELRRRFRPEF 171
+G+ +D KNT+IIMTSN G I LG +D+ M+ V EE++ F+PEF
Sbjct: 646 QGRKIDFKNTVIIMTSNAGAESIISPKRLGFGAVADEKADYKVMKDRVMEEVKHIFKPEF 705
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERL-EAKNMELTVTHTFKKKLIEEGYNPSY 230
+NRIDE+IVF LNK + +IV IMLKEI +R E N+ L+V K+ LI +GY+ Y
Sbjct: 706 INRIDEIIVFHPLNKGHMKDIVTIMLKEIMKRTKEQMNITLSVDEAAKEFLINKGYDEKY 765
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSV 262
GARPLRR I LED LAE IL G ++ GD V
Sbjct: 766 GARPLRRTIQSCLEDRLAEEILDGAVKEGDEV 797
>gi|238752926|ref|ZP_04614388.1| Chaperone protein clpB 1 [Yersinia rohdei ATCC 43380]
gi|238708834|gb|EEQ01090.1| Chaperone protein clpB 1 [Yersinia rohdei ATCC 43380]
Length = 857
Score = 306 bits (784), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 149/269 (55%), Positives = 198/269 (73%), Gaps = 1/269 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F S +AMVRIDMSE+MEKH+
Sbjct: 583 AIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALAMFLFDSDDAMVRIDMSEFMEKHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA-RESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT++IMTSN+G +I R +M+ V E + FRPEF+NRIDEV+V
Sbjct: 703 QGRTVDFRNTVVIMTSNLGSDLIQERFGERSYAEMKDMVMEVVTHHFRPEFINRIDEVVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L + L I +I L+ +Y+RLE + ++T+T + L E G++P YGARPL+RAI
Sbjct: 763 FHPLGRAHLASIANIQLERLYKRLEERGYQVTITQPALEFLGEAGFDPVYGARPLKRAIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
+ +E+ LA+ IL+G + G VT+D ++G
Sbjct: 823 QEIENPLAQQILSGKLIPGIPVTLDVENG 851
>gi|331268385|ref|YP_004394877.1| ATPase AAA-2 domain-containing protein [Clostridium botulinum
BKT015925]
gi|329124935|gb|AEB74880.1| ATPase AAA-2 domain protein [Clostridium botulinum BKT015925]
Length = 813
Score = 306 bits (784), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 151/269 (56%), Positives = 196/269 (72%), Gaps = 11/269 (4%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RARVG++DP RPI SF+F GPTGVGKTEL+ ALA FG + M+R+DMSEYMEKH VS+
Sbjct: 530 RARVGLKDPKRPIGSFIFLGPTGVGKTELSKALAEAMFGDENNMIRVDMSEYMEKHAVSR 589
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPGYVG + GGQLTE VR P+SV+LFDEIEKAH +V N++LQ+L+DGR+TD KG+
Sbjct: 590 LVGSPPGYVGHDEGGQLTEKVRRNPYSVVLFDEIEKAHPEVFNILLQILEDGRLTDSKGK 649
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG--------SDQMER---GVAEELRRRFRPEFLN 173
TVD +NTIII+TSN+G S I +++ LG D+ ER V EL+R FRPEFLN
Sbjct: 650 TVDFRNTIIILTSNVGASTINKQNTLGFSNSEDEAEDEYERMKDNVMVELKRSFRPEFLN 709
Query: 174 RIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGAR 233
RID++IVF LN+ L EIV +ML+E+ RL+ + + + +K L +G++ +YGAR
Sbjct: 710 RIDDIIVFHTLNQEDLKEIVKLMLEEVSGRLKNREVYIEFDEKAEKLLSSKGFDSAYGAR 769
Query: 234 PLRRAIGRLLEDNLAEIILTGYIQVGDSV 262
PLRR I + +ED L+E IL G I+ GD V
Sbjct: 770 PLRRTITKTVEDKLSEEILKGIIKKGDHV 798
>gi|433457230|ref|ZP_20415238.1| ATP-dependent Clp protease, ATP-binding subunit [Arthrobacter
crystallopoietes BAB-32]
gi|432195128|gb|ELK51687.1| ATP-dependent Clp protease, ATP-binding subunit [Arthrobacter
crystallopoietes BAB-32]
Length = 812
Score = 306 bits (784), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 145/281 (51%), Positives = 202/281 (71%), Gaps = 10/281 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R R G++DPNRP SF+F GPTGVGKTELA ALA FG ++A++ +DMSEY EKHT
Sbjct: 507 AIRRTRAGLKDPNRPSGSFIFAGPTGVGKTELAKALAEFLFGEEDALITLDMSEYSEKHT 566
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ FG+PPGYVG+E GGQLTE VR RP SV+LFDE+EKAH D+ N +LQ+L+DGR+TD
Sbjct: 567 VSRLFGAPPGYVGYEEGGQLTEKVRRRPFSVVLFDEVEKAHADLFNSLLQILEDGRLTDS 626
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR----------ESILGSDQMERGVAEELRRRFRPEF 171
+G+ VD KNT+IIMT+N+G I++ ++ G ++M V +EL++ FRPEF
Sbjct: 627 QGRVVDFKNTVIIMTTNLGTRDISKGVMTGFQSGTDTKTGYERMRARVQDELKQHFRPEF 686
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNR+D+ +VF QL + ++++IVD+ + + +RL KNM++ +T K L GY+P+ G
Sbjct: 687 LNRVDDTVVFPQLTEEEIVQIVDLFVTRLQKRLAEKNMKIDLTPAAKVLLANRGYDPTMG 746
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNV 272
ARPLRR I R +ED L+E IL G IQ G+++ +D D G+
Sbjct: 747 ARPLRRTIQREVEDQLSEKILFGEIQPGETIHVDVDGEGDA 787
>gi|376259729|ref|YP_005146449.1| chaperone ATPase [Clostridium sp. BNL1100]
gi|373943723|gb|AEY64644.1| ATPase with chaperone activity, ATP-binding subunit [Clostridium
sp. BNL1100]
Length = 810
Score = 306 bits (784), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 147/286 (51%), Positives = 204/286 (71%), Gaps = 12/286 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R RVG++DP RP+ SF+F GPTGVGKTEL ALA FG +++M+R+DMSE+MEKH+
Sbjct: 525 AIRRGRVGLKDPKRPVGSFIFMGPTGVGKTELCKALAEAMFGDEKSMIRVDMSEFMEKHS 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG++ GGQLTE VR +P+SV+LFDEIEKAH D+ N++LQ+L+DGR+TD
Sbjct: 585 VSKLVGSPPGYVGYDEGGQLTERVRRKPYSVLLFDEIEKAHPDIFNILLQILEDGRLTDS 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG-----------SDQMERGVAEELRRRFRPE 170
+G+ VD +NTIIIMTSN+G I LG + M+ V EL++ FRPE
Sbjct: 645 QGRVVDFRNTIIIMTSNVGARTITEPKRLGFSASNDESAKNYEDMKNNVMGELKKMFRPE 704
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNRID++IVF L+K + EIV +ML + RL+A + + V+ L ++G++P +
Sbjct: 705 FLNRIDDIIVFHPLSKENIKEIVRLMLDVLVNRLKANEITMEVSEEAMDYLAQKGFDPVF 764
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYR 276
GARPLRRAI ++ED LAE +L G ++ GDS+ +D D G N+++ +
Sbjct: 765 GARPLRRAIQSMVEDKLAEDMLEGKVKAGDSIRIDFD-GENIVVNK 809
>gi|57233811|ref|YP_182121.1| chaperone ClpB [Dehalococcoides ethenogenes 195]
gi|57224259|gb|AAW39316.1| chaperone ClpB [Dehalococcoides ethenogenes 195]
Length = 812
Score = 306 bits (783), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 149/291 (51%), Positives = 203/291 (69%), Gaps = 16/291 (5%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G++DP RPI SFLF GPTGVGKTELA +LA+ F + AMVR+DMSEY EKHT
Sbjct: 522 AIRRSRAGLKDPRRPIGSFLFLGPTGVGKTELARSLAWFLFDDETAMVRLDMSEYQEKHT 581
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTE VR RP+ VIL DEIEKAH DV N +LQLLDDGR+TDG
Sbjct: 582 VSRLVGAPPGYVGYDEGGQLTELVRRRPYRVILLDEIEKAHPDVYNTLLQLLDDGRLTDG 641
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESIL--------------GSDQMERGVAEELRRRF 167
+G+TVD KNT+IIMTSN G I RES L G ++M+ V E+++ F
Sbjct: 642 QGRTVDFKNTVIIMTSNAGIETIKRESALGFAVRTDDSKTRHDGYERMKDKVMAEVKKTF 701
Query: 168 RPEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYN 227
RPEF+NR+DE+IVF +L + Q+ +IVD ++K++ +RLE + ++L +T K L + GY+
Sbjct: 702 RPEFINRVDEIIVFHELAEEQIRQIVDFIIKDVSKRLEERKLKLELTDAAKGWLAKVGYD 761
Query: 228 PSYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHR 278
P++GARPLRRAI R +E LA+ +L + ++ T+ D + + +
Sbjct: 762 PAFGARPLRRAIERYIESPLADKLLRN--EFSENATILVDKADEALSFSQK 810
>gi|313681700|ref|YP_004059438.1| ATPase AAA-2 domain-containing protein [Sulfuricurvum kujiense DSM
16994]
gi|313154560|gb|ADR33238.1| ATPase AAA-2 domain protein [Sulfuricurvum kujiense DSM 16994]
Length = 859
Score = 306 bits (783), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 145/266 (54%), Positives = 196/266 (73%), Gaps = 4/266 (1%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R + G+ D +RPI SFLF GPTGVGKT+ A LA F S E+M+RIDMSEYMEKH
Sbjct: 587 AIKRNKAGLSDKSRPIGSFLFLGPTGVGKTQTAKTLAKFLFDSSESMIRIDMSEYMEKHA 646
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVGF+ GGQLTEAVR +P+SVILFDE+EKAH DV NV+LQ+LDDGR+TD
Sbjct: 647 VSRLVGAPPGYVGFDEGGQLTEAVRRKPYSVILFDEVEKAHPDVFNVLLQVLDDGRLTDN 706
Query: 122 KGQTVDLKNTIIIMTSNIG-DSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
KG VD NTIII+TSNI D ++A G ++E V EL++ F+PEFLNR+D+V+V
Sbjct: 707 KGVVVDFTNTIIILTSNIASDKIMAHH---GDPKLEEMVLGELKQHFKPEFLNRLDDVVV 763
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L + Q++ IVD+ K+I ++E +++ LT+T + K+ + G++P YGARPL+RA+
Sbjct: 764 FNPLGEAQILSIVDLFFKDISAKVEERDITLTLTESAKRYIARAGFDPVYGARPLKRALY 823
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDC 266
++ED LA++IL G + G SVT D
Sbjct: 824 EIVEDRLADLILGGEVDEGSSVTFDA 849
>gi|94985312|ref|YP_604676.1| ATPase AAA [Deinococcus geothermalis DSM 11300]
gi|94555593|gb|ABF45507.1| ATPase AAA-2 [Deinococcus geothermalis DSM 11300]
Length = 861
Score = 306 bits (783), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 155/283 (54%), Positives = 199/283 (70%), Gaps = 6/283 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G+ DPNRP+ SF+F GPTGVGKTELA ALA F S +AM+RIDMSEYMEKH+
Sbjct: 582 AIRRARAGLNDPNRPLGSFMFLGPTGVGKTELAKALAEFLFDSPDAMIRIDMSEYMEKHS 641
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG+E GGQLTEAVR RP+SVIL DEIEKAH DV NV+LQ+LDDGR+TDG
Sbjct: 642 VARLIGAPPGYVGYEEGGQLTEAVRRRPYSVILLDEIEKAHPDVFNVLLQVLDDGRLTDG 701
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS--DQMERGVAEELRRRFRPEFLNRIDEVI 179
+G+TVD +NT+IIMTSNIG +I G + + V + L+ FRPEFLNRID++I
Sbjct: 702 QGRTVDFRNTLIIMTSNIGSHLILEAQARGDSPESIREQVLQVLQAHFRPEFLNRIDDII 761
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF L L +IV+I L + RL + + L +T K KL + GY+P++GARPL+R I
Sbjct: 762 VFDALTPANLHKIVEIQLGGLRRRLAERRVTLHLTDAAKDKLAQIGYDPAFGARPLKRVI 821
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSM 282
R +E LA IL G + G ++T+D D GN +R G +
Sbjct: 822 AREIETPLAREILQGRVPEGSTLTVDYD--GN--QFRFETGVL 860
>gi|336321879|ref|YP_004601847.1| ATPase AAA [[Cellvibrio] gilvus ATCC 13127]
gi|336105460|gb|AEI13279.1| ATPase AAA-2 domain protein [[Cellvibrio] gilvus ATCC 13127]
Length = 860
Score = 306 bits (783), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 147/279 (52%), Positives = 202/279 (72%), Gaps = 10/279 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R R G++DP RP SF+F GPTGVGKTELA ALA FG ++A++++DMSE+ EKHT
Sbjct: 527 AIRRTRAGLKDPKRPGGSFIFAGPTGVGKTELAKALAEFLFGDEDALIQLDMSEFSEKHT 586
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ FGSPPGYVG++ GGQLTE VR RP SV+LFDE+EKAH D+ N +LQ+L+DGR+TD
Sbjct: 587 VSRLFGSPPGYVGYDEGGQLTEKVRRRPFSVVLFDEVEKAHADIFNSLLQILEDGRLTDS 646
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
+G+ VD KNT+IIMT+N+G IA+ + G ++M+ V +EL+ FRPEF
Sbjct: 647 QGRVVDFKNTVIIMTTNLGTRDIAKGVMTGFQAGGDLSTDYERMKAKVNDELKTHFRPEF 706
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNR+D+V+VF QL++ ++ IVD+M+ ++ +RL K+M L +T KK L E+GY+P G
Sbjct: 707 LNRVDDVVVFPQLSQPEIFSIVDLMIAKLDQRLRDKDMGLEITPAAKKLLSEKGYDPVLG 766
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGG 270
ARPLRRAI R +ED L+E IL G ++ G V +D + G
Sbjct: 767 ARPLRRAIQREIEDALSEKILFGELKAGQQVIVDAEGEG 805
>gi|160892843|ref|ZP_02073632.1| hypothetical protein CLOL250_00373 [Clostridium sp. L2-50]
gi|156865402|gb|EDO58833.1| ATP-dependent chaperone protein ClpB [Clostridium sp. L2-50]
Length = 860
Score = 306 bits (783), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 143/263 (54%), Positives = 198/263 (75%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
R++ GI+DP++PI SFLF GPTGVGKTELA LA F +++ MVRIDMSEYMEK++VS+
Sbjct: 588 RSKAGIKDPSKPIGSFLFLGPTGVGKTELAKTLAEALFDNEQNMVRIDMSEYMEKYSVSR 647
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG++ GGQLTEAVR +P+SV+LFDE+EKAH DV NV+LQ+LDDGR+TD +G+
Sbjct: 648 LIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNVLLQVLDDGRITDSQGR 707
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVFRQL 184
TVD KNTIIIMTSNIG IA +D++ V +L++ FRPEFLNRIDE I+F+ L
Sbjct: 708 TVDFKNTIIIMTSNIGGVDIAEGGGEITDEIRETVMNKLKQHFRPEFLNRIDETIIFKSL 767
Query: 185 NKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGRLLE 244
+K + IVD+M+K++ +RL + + + +T K +I++GY+P YGARPL+R I + +E
Sbjct: 768 SKENIGSIVDLMVKDLNKRLAGQEITIKLTDEAKSAIIDQGYDPVYGARPLKRFIQKNVE 827
Query: 245 DNLAEIILTGYIQVGDSVTMDCD 267
+A +IL G + ++ +D D
Sbjct: 828 TLVARMILAGEVSTQSAIIIDYD 850
>gi|385800597|ref|YP_005837001.1| ATPase [Halanaerobium praevalens DSM 2228]
gi|309389961|gb|ADO77841.1| ATPase AAA-2 domain protein [Halanaerobium praevalens DSM 2228]
Length = 806
Score = 306 bits (783), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 150/272 (55%), Positives = 192/272 (70%), Gaps = 10/272 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++ P RPI SF+F GPTGVGKTELA LA F +EAM+R+DMSEYMEKH+VS+
Sbjct: 525 RARAGLKAPKRPIGSFIFLGPTGVGKTELAKTLAETMFNDEEAMIRVDMSEYMEKHSVSR 584
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPGYVG + GGQLTE VR RP+SVILFDEIEKAH DV N++LQ+L+DG +TD G+
Sbjct: 585 LVGSPPGYVGHDEGGQLTEPVRRRPYSVILFDEIEKAHPDVFNILLQILEDGVLTDSHGR 644
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEFLNR 174
VD KNTI++MTSN+G I ++S LG + M+ V +LR+ F+PEFLNR
Sbjct: 645 KVDFKNTIVVMTSNVGADFIEKQSQLGFKAENDEKDNYENMKDNVMSKLRKTFKPEFLNR 704
Query: 175 IDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARP 234
+DE IVF LN+ + +IVD+ML E+ ERL K +EL +T K+KL E+GY+ +GARP
Sbjct: 705 LDETIVFHALNQEHIKKIVDLMLDELKERLAEKEIELEMTEKAKEKLAEDGYDSEFGARP 764
Query: 235 LRRAIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
LRR I R +E+ LA IL + VT+D
Sbjct: 765 LRREIQRQIENTLAVKILDKEFENNKKVTIDV 796
>gi|383785544|ref|YP_005470114.1| chaperone clpB [Leptospirillum ferrooxidans C2-3]
gi|383084457|dbj|BAM07984.1| chaperone clpB [Leptospirillum ferrooxidans C2-3]
Length = 863
Score = 306 bits (783), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 146/266 (54%), Positives = 197/266 (74%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR GI+DPNRP+ SF F GPTGVGKTELA ALA F S +AM+RIDMSEYMEKH
Sbjct: 587 AIRRARAGIQDPNRPLGSFFFLGPTGVGKTELAKALAEFLFDSDQAMIRIDMSEYMEKHA 646
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTE++R +P+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 647 VSRLVGAPPGYVGYEEGGQLTESIRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 706
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVF 181
+G+ VD +NT+IIMTSN+G +I L +D+ ++ V E L + FRPEFLNRIDE+IVF
Sbjct: 707 QGRVVDFRNTVIIMTSNVGSDIIRERVGLDADETKQEVLEILSKTFRPEFLNRIDEIIVF 766
Query: 182 RQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGR 241
L + ++ IV I L + RL+ + ++L ++ +++L GY+P YGARPL+RA+
Sbjct: 767 HPLLRHEIGRIVRIQLDGLNARLKDQGIQLEISPAAEEELTAVGYDPVYGARPLKRAVQS 826
Query: 242 LLEDNLAEIILTGYIQVGDSVTMDCD 267
L+ + LA+ IL+G I G V++D D
Sbjct: 827 LILNPLAQKILSGGISQGSVVSVDFD 852
>gi|422009842|ref|ZP_16356824.1| protein disaggregation chaperone [Providencia rettgeri Dmel1]
gi|414092015|gb|EKT53694.1| protein disaggregation chaperone [Providencia rettgeri Dmel1]
Length = 857
Score = 306 bits (783), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 148/268 (55%), Positives = 197/268 (73%), Gaps = 1/268 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SF+F GPTGVGKTEL ALA F S +AMVRIDMSE+MEKH
Sbjct: 583 AIRRSRAGLSDPNRPIGSFMFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHA 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA-RESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT+IIMTSN+G +I R ++G +M+ V E + FRPEF+NRIDEV+V
Sbjct: 703 QGRTVDFRNTVIIMTSNLGSDLIQERFGMIGYSEMKDMVMEVVSHSFRPEFINRIDEVVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L K Q+ I +I L +Y+RLE E++ T +K+ E G++P +GARPL+RAI
Sbjct: 763 FHPLGKEQITNIANIQLARLYKRLEEHGYEVSATPAALEKIGEAGFDPIFGARPLKRAIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDS 268
+ +E+ LA+ IL+G + G V +D ++
Sbjct: 823 QEIENPLAQEILSGKLLPGKPVILDVEN 850
>gi|238924658|ref|YP_002938174.1| ATPase AAA-2 [Eubacterium rectale ATCC 33656]
gi|238876333|gb|ACR76040.1| ATPase AAA-2 [Eubacterium rectale ATCC 33656]
Length = 818
Score = 306 bits (783), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 156/294 (53%), Positives = 206/294 (70%), Gaps = 20/294 (6%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R RVG++DP +PI SFLF GPTGVGKTE++ ALA FG ++AM+R+DMSEYMEKH+
Sbjct: 533 AVRRGRVGLKDPKKPIGSFLFLGPTGVGKTEVSKALAEAVFGKEDAMIRVDMSEYMEKHS 592
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG E GGQL+E VR P SVILFDEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 593 VSKMIGSPPGYVGHEEGGQLSEKVRRNPFSVILFDEIEKAHPDVFNILLQVLDDGRITDS 652
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
+G+TVD KNTIIIMTSN G S I LG ++M+ V EE+RR F+PEF
Sbjct: 653 QGRTVDFKNTIIIMTSNAGASSIIEPKRLGFGAGEDEKQDHERMKNSVMEEVRRIFKPEF 712
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERL-EAKNMELTVTHTFKKKLIEEGYNPSY 230
LNRIDE IVFR LNK + IV +++KE+ +R E ++ELTV + K ++++ Y+ Y
Sbjct: 713 LNRIDETIVFRALNKDDMKHIVTLLVKELKKRCKEQLDIELTVRDSAKSFIVDKAYDRKY 772
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMTV 284
GARPL+R + +ED ++E I+TG I+ G+ V +I +++ S+TV
Sbjct: 773 GARPLKRKLQEEIEDRMSEDIITGKIKRGNKV---------IISTKNKQISLTV 817
>gi|414161188|ref|ZP_11417449.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
simulans ACS-120-V-Sch1]
gi|410876450|gb|EKS24356.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
simulans ACS-120-V-Sch1]
Length = 821
Score = 306 bits (783), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 148/271 (54%), Positives = 198/271 (73%), Gaps = 10/271 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDEDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDE+EKAH DV N+MLQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEVEKAHPDVFNIMLQVLDDGFLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESIL----GSDQ------MERGVAEELRRRFRPEFLNR 174
VD +NT+IIMTSN+G + + GSD+ + + +EL+ FRPEFLNR
Sbjct: 646 RVDFRNTVIIMTSNVGAQELQDQRFAGFGGGSDEGADYETIRSTMMKELKNAFRPEFLNR 705
Query: 175 IDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARP 234
+D++IVF +L+K +L EIV M+ + +RL +++ + VT K+K+ EEGY+P YGARP
Sbjct: 706 VDDIIVFHKLDKAELKEIVTKMVSNLTDRLSEQDINIEVTEAAKEKIAEEGYDPQYGARP 765
Query: 235 LRRAIGRLLEDNLAEIILTGYIQVGDSVTMD 265
L RAI + +EDNL+E+IL G G V +D
Sbjct: 766 LIRAIQKTVEDNLSELILDGNQLEGKDVVVD 796
>gi|284043144|ref|YP_003393484.1| ATPase AAA [Conexibacter woesei DSM 14684]
gi|283947365|gb|ADB50109.1| ATPase AAA-2 domain protein [Conexibacter woesei DSM 14684]
Length = 868
Score = 306 bits (783), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 147/275 (53%), Positives = 201/275 (73%), Gaps = 11/275 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G++DP RP SF+F GP+GVGKTELA LA FG ++AMVRIDMSEYMEKH
Sbjct: 536 AIRRSRAGLKDPKRPTGSFVFLGPSGVGKTELARTLAEFLFGDEDAMVRIDMSEYMEKHA 595
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ GSPPGY+G++ GGQLTEAVR +P+SV+L DEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 596 VSRLVGSPPGYIGYDEGGQLTEAVRRKPYSVLLLDEIEKAHPDVFNILLQILEDGRLTDA 655
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG-----------SDQMERGVAEELRRRFRPE 170
+G+TVD ++ I+IMTSNIG S IAR + LG D M+ + EL++ FRPE
Sbjct: 656 QGRTVDFRHAIVIMTSNIGASEIARNTPLGFAVSDDETGITYDDMKTRIMGELKKVFRPE 715
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNRID+VIVF +L K ++ EIV+++L+ I E L + ++L +T K L+++G++P+
Sbjct: 716 FLNRIDDVIVFHKLAKDEIKEIVELLLRRIRESLAERELQLELTEEAKDLLVDKGWDPAM 775
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMD 265
GARPLRRAI R +ED LA+ +L + G +V +D
Sbjct: 776 GARPLRRAIQRYIEDPLADFVLRSELMAGGTVMVD 810
>gi|328951491|ref|YP_004368826.1| ATP-dependent chaperone ClpB [Marinithermus hydrothermalis DSM
14884]
gi|328451815|gb|AEB12716.1| ATP-dependent chaperone ClpB [Marinithermus hydrothermalis DSM
14884]
Length = 855
Score = 306 bits (783), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 153/273 (56%), Positives = 192/273 (70%), Gaps = 6/273 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DPNRPI SFLF GPTGVGKTELA LA F S+EAMVRIDM+EYMEKH
Sbjct: 574 AIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDSEEAMVRIDMTEYMEKHA 633
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG+E GGQLTE VR +P++VILFDEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 634 VARLIGAPPGYVGYEEGGQLTEVVRRKPYTVILFDEIEKAHPDVFNILLQILDDGRLTDS 693
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEE----LRRRFRPEFLNRIDE 177
G+ VD +NT+II+TSN+G +I E I E G+ E L+ FRPEFLNR+DE
Sbjct: 694 HGRVVDFRNTVIILTSNLGSPLIL-EGIQQGSSYE-GIRERVFRVLQEHFRPEFLNRLDE 751
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+IVFR L K Q++ IVD+ L+ + RL+ K + L +T K L E GY+P++GARPLRR
Sbjct: 752 IIVFRPLTKEQIVRIVDLQLQRLQARLQEKRVTLELTPEAKTWLAERGYDPAFGARPLRR 811
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGG 270
I R +E LA +IL G I G V G
Sbjct: 812 VIQREVETPLARMILEGRIPEGARVVARPGEAG 844
>gi|308171976|ref|YP_003918681.1| class III stress response-like ATPase, AAA+ superfamily [Bacillus
amyloliquefaciens DSM 7]
gi|384157699|ref|YP_005539772.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus amyloliquefaciens TA208]
gi|384162492|ref|YP_005543871.1| class III stress response ATPase [Bacillus amyloliquefaciens LL3]
gi|384166714|ref|YP_005548092.1| class III stress response-related ATPase [Bacillus
amyloliquefaciens XH7]
gi|307604840|emb|CBI41211.1| class III stress response-related ATPase, AAA+ superfamily
[Bacillus amyloliquefaciens DSM 7]
gi|328551787|gb|AEB22279.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus amyloliquefaciens TA208]
gi|328910047|gb|AEB61643.1| class III stress response ATPase [Bacillus amyloliquefaciens LL3]
gi|341825993|gb|AEK87244.1| class III stress response-related ATPase, AAA+ superfamily
[Bacillus amyloliquefaciens XH7]
Length = 811
Score = 306 bits (783), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 146/274 (53%), Positives = 196/274 (71%), Gaps = 9/274 (3%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTGVGKTELA ALA FG +EAM+R+DMSEYMEKH+ S+ GS
Sbjct: 531 GLKDPKRPIGSFIFLGPTGVGKTELARALAESIFGDEEAMIRVDMSEYMEKHSTSRLVGS 590
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG++ GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+L+DGR+TD KG+TVD
Sbjct: 591 PPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDF 650
Query: 129 KNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFLNRIDEVI 179
+NTI+IMTSN+G S + R +G M+ V EL+R FRPEF+NRIDE+I
Sbjct: 651 RNTILIMTSNVGASELKRNKYVGFNVQDESQNHKDMKDKVMGELKRAFRPEFINRIDEII 710
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF L K L +IV +M ++ +RL+ +++ + +T K K+ +EG + YGARPLRRAI
Sbjct: 711 VFHSLEKKHLTDIVSLMSDQLTKRLKEQDLSIELTEAAKAKVADEGVDLEYGARPLRRAI 770
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
+ +ED L+E +L G I G + +D + G V+
Sbjct: 771 QKHVEDRLSEELLRGNIDKGQHIVLDVEDGEFVV 804
>gi|448240622|ref|YP_007404675.1| protein disaggregation chaperone [Serratia marcescens WW4]
gi|445210986|gb|AGE16656.1| protein disaggregation chaperone [Serratia marcescens WW4]
gi|453064614|gb|EMF05578.1| protein disaggregation chaperone [Serratia marcescens VGH107]
Length = 857
Score = 306 bits (783), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 148/268 (55%), Positives = 194/268 (72%), Gaps = 1/268 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F S +AMVRIDMSE+MEKH+
Sbjct: 583 AIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALASFLFDSDDAMVRIDMSEFMEKHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARE-SILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT++IMTSN+G +I + QM+ V E + FRPEF+NRIDEV+V
Sbjct: 703 QGRTVDFRNTVVIMTSNLGSDLIQEHFGQMNYAQMKESVMEMVSHHFRPEFINRIDEVVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L + + I I L +Y+RLE + E+T+T L + GY+P YGARPL+RAI
Sbjct: 763 FHPLGEKHIAAIAKIQLSRLYKRLEERGYEVTMTEPALALLSKTGYDPVYGARPLKRAIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDS 268
+ +E+ LA+ IL+G + G VT+D ++
Sbjct: 823 QEIENPLAQQILSGKLIPGKLVTLDVEN 850
>gi|123441247|ref|YP_001005234.1| protein disaggregation chaperone [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|420257395|ref|ZP_14760155.1| protein disaggregation chaperone [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|122088208|emb|CAL10996.1| Clp ATPase [Yersinia enterocolitica subsp. enterocolitica 8081]
gi|404515185|gb|EKA28960.1| protein disaggregation chaperone [Yersinia enterocolitica subsp.
enterocolitica WA-314]
Length = 857
Score = 306 bits (783), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 149/269 (55%), Positives = 197/269 (73%), Gaps = 1/269 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F S +AMVRIDMSE+MEKH+
Sbjct: 583 AIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALATFLFDSDDAMVRIDMSEFMEKHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA-RESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT++IMTSN+G +I R +M+ V E + FRPEF+NRIDEV+V
Sbjct: 703 QGRTVDFRNTVVIMTSNLGSDLIQERFGERSYSEMKEMVMEVVTHHFRPEFINRIDEVVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L + L I I L+ +Y+RLE + ++T+T + L E G++P YGARPL+RAI
Sbjct: 763 FHPLGRAHLASIASIQLERLYKRLEERGYQVTITQPALEFLGETGFDPVYGARPLKRAIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
+ +E+ LA+ IL+G + G VT+D ++G
Sbjct: 823 QEIENPLAQQILSGKLIPGVPVTLDVENG 851
>gi|448236977|ref|YP_007401035.1| chaperonin [Geobacillus sp. GHH01]
gi|445205819|gb|AGE21284.1| chaperonin [Geobacillus sp. GHH01]
Length = 864
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 146/271 (53%), Positives = 204/271 (75%), Gaps = 3/271 (1%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DPNRPI SFLF GPTGVGKTELA ALA F S+E ++R+DMSEYMEKH VS+
Sbjct: 588 RARAGMKDPNRPIGSFLFLGPTGVGKTELAKALAEALFDSEEQLIRLDMSEYMEKHAVSR 647
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E GGQLTEAVR +P+SV+LFDEIEKAH DV N++LQLLDDGR+TD +G+
Sbjct: 648 LIGAPPGYVGYEEGGQLTEAVRRKPYSVLLFDEIEKAHPDVFNILLQLLDDGRLTDSQGR 707
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG--SDQMERGVAEELRRRFRPEFLNRIDEVIVFR 182
TVD KNT++IMTSNIG ++ E+ G ++ + V ++LR FRPEFLNRID++++F+
Sbjct: 708 TVDFKNTVVIMTSNIGSPLLL-ENKQGDIDEETRKQVFDQLRAHFRPEFLNRIDDIVLFK 766
Query: 183 QLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGRL 242
L+ ++ IV+ +E+ RL +++EL +T K+ + E G++P YGARPL+R + +
Sbjct: 767 PLSMNEVKGIVEKFARELSARLADRHIELVLTEAAKQYIAEAGFDPVYGARPLKRFMQKQ 826
Query: 243 LEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
+E LA+ ++ G ++ +VT+D D+G VI
Sbjct: 827 IETPLAKELIAGRVKDYSTVTVDVDNGQIVI 857
>gi|271970316|ref|YP_003344512.1| class III stress response-related ATPase [Streptosporangium roseum
DSM 43021]
gi|270513491|gb|ACZ91769.1| class III stress response-related ATPase [Streptosporangium roseum
DSM 43021]
Length = 835
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 146/280 (52%), Positives = 204/280 (72%), Gaps = 10/280 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++ R R G++DP RP SF+F GP+GVGKTEL+ ALA FG ++A++ +DMSE+MEKHT
Sbjct: 527 SIRRTRAGLKDPRRPGGSFIFAGPSGVGKTELSKALAEFLFGDEDALIMLDMSEFMEKHT 586
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ FGSPPGYVG+E GGQLTE VR +P SV+LFDEIEKAH D+ N +LQ+L+DGR+TD
Sbjct: 587 VSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHPDIFNSLLQILEDGRLTDA 646
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
+G+ VD KNT+IIMT+N+G I++ +G D+M+ V EEL++ FRPEF
Sbjct: 647 QGRVVDFKNTVIIMTTNLGTRDISKGQGVGFAKSNDTESNYDRMKSKVQEELKQHFRPEF 706
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNR+D+++VF QL ++++IVD+ML ++ ERL+ ++M L VT K+ L + GY+P G
Sbjct: 707 LNRVDDIVVFHQLTPKEIIKIVDLMLAQVGERLKDRDMGLEVTQDAKQLLADRGYDPVMG 766
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGN 271
ARPLRR I R LED+L+E IL G ++ G V + + G+
Sbjct: 767 ARPLRRTIQRELEDSLSEKILYGELRPGQIVKISIEGEGD 806
>gi|281412255|ref|YP_003346334.1| ATPase AAA-2 domain protein [Thermotoga naphthophila RKU-10]
gi|281373358|gb|ADA66920.1| ATPase AAA-2 domain protein [Thermotoga naphthophila RKU-10]
Length = 820
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 150/281 (53%), Positives = 201/281 (71%), Gaps = 13/281 (4%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI FLF GPTGVGKTELA ALA FG + A++R DMSEYME+ +VS+ G+
Sbjct: 533 GLKDPRRPIGVFLFLGPTGVGKTELAKALAEYLFGDERALIRFDMSEYMERFSVSRLIGA 592
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG+E GG LTE VR RP SVILFDEIEKAH DV N++LQ++DDGR+TD +G+ VD
Sbjct: 593 PPGYVGYEEGGTLTEKVRRRPFSVILFDEIEKAHPDVFNILLQIMDDGRLTDSQGREVDF 652
Query: 129 KNTIIIMTSNIGDSVIARES----ILGSDQMERG-------VAEELRRRFRPEFLNRIDE 177
+NTIIIMTSNIG S I + +G + E+ V EE++R FRPEFLNRIDE
Sbjct: 653 RNTIIIMTSNIGSSYINKSKRTLGFVGDNNEEKEFEKIKDLVLEEVKRTFRPEFLNRIDE 712
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
I+F LNK + +I+DI+L+++ +RL KNM+L +T + K+ L+E+G++P YGARPL+R
Sbjct: 713 TIIFHPLNKEHIEQIIDILLRDLRKRLSEKNMKLVLTKSAKEFLVEKGFDPVYGARPLKR 772
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHR 278
AI R +ED L+E IL G GD++ C + + + + +
Sbjct: 773 AIQRYVEDPLSEEILRGKFNEGDTIV--CSARKDALRFTRK 811
>gi|238760706|ref|ZP_04621827.1| Chaperone protein clpB 1 [Yersinia aldovae ATCC 35236]
gi|238701079|gb|EEP93675.1| Chaperone protein clpB 1 [Yersinia aldovae ATCC 35236]
Length = 857
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 149/269 (55%), Positives = 197/269 (73%), Gaps = 1/269 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F S +AMVRIDMSE+MEKH+
Sbjct: 583 AIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALATFLFDSDDAMVRIDMSEFMEKHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA-RESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT++IMTSN+G +I R +M+ V E + FRPEF+NRIDEV+V
Sbjct: 703 QGRTVDFRNTVVIMTSNLGSDLIQERFGERSYSEMKEMVMEVVTHHFRPEFINRIDEVVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L + L I I L+ +Y+RLE + ++T+T + L E G++P YGARPL+RAI
Sbjct: 763 FHPLGRAHLASIASIQLERLYKRLEERGYQVTITQPALEFLGETGFDPVYGARPLKRAIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
+ +E+ LA+ IL+G + G VT+D ++G
Sbjct: 823 QEIENPLAQQILSGKLIPGVPVTLDVENG 851
>gi|357385913|ref|YP_004900637.1| ClpB protein [Pelagibacterium halotolerans B2]
gi|351594550|gb|AEQ52887.1| ClpB protein [Pelagibacterium halotolerans B2]
Length = 871
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 147/274 (53%), Positives = 199/274 (72%), Gaps = 1/274 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DPNRPI SF+F GPTGVGKTEL ALA F + AMVR+DMSE+MEKH
Sbjct: 585 AVRRARAGLQDPNRPIGSFMFLGPTGVGKTELTKALAQFLFDDETAMVRLDMSEFMEKHA 644
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG++ GG LTEAVR RP+ V+LFDEIEKAH DV NV+LQ+LDDGR+TDG
Sbjct: 645 VARLIGAPPGYVGYDEGGVLTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDG 704
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMERG-VAEELRRRFRPEFLNRIDEVIV 180
+G TVD +NT+IIMTSN+G +A + S ++ RG V + ++ FRPEFLNR+DE+++
Sbjct: 705 QGHTVDFRNTLIIMTSNLGSEYLAAQPDGESVELVRGKVLDTVKASFRPEFLNRVDEILL 764
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F +L + Q+ IVDI LK + + L+A+ + + VT + L EGY+ +YGARPL+R I
Sbjct: 765 FHRLERSQMGAIVDIQLKRLQKLLDAREISIEVTPAARDWLANEGYDSAYGARPLKRVIQ 824
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
R ++D LAE +L G + G +V +D G VI+
Sbjct: 825 RSVQDELAEKMLAGDVADGGTVKVDAGEDGLVIL 858
>gi|386309637|ref|YP_006005693.1| clpb protein [Yersinia enterocolitica subsp. palearctica Y11]
gi|418243771|ref|ZP_12870225.1| protein disaggregation chaperone [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|433551271|ref|ZP_20507314.1| ClpB protein [Yersinia enterocolitica IP 10393]
gi|318604489|emb|CBY25987.1| clpb protein [Yersinia enterocolitica subsp. palearctica Y11]
gi|330863598|emb|CBX73708.1| chaperone protein clpB [Yersinia enterocolitica W22703]
gi|351776724|gb|EHB19022.1| protein disaggregation chaperone [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|431788370|emb|CCO70354.1| ClpB protein [Yersinia enterocolitica IP 10393]
Length = 857
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 149/269 (55%), Positives = 197/269 (73%), Gaps = 1/269 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F S +AMVRIDMSE+MEKH+
Sbjct: 583 AIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALATFLFDSDDAMVRIDMSEFMEKHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA-RESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT++IMTSN+G +I R +M+ V E + FRPEF+NRIDEV+V
Sbjct: 703 QGRTVDFRNTVVIMTSNLGSDLIQERFGERSYSEMKEMVMEVVTHHFRPEFINRIDEVVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L + L I I L+ +Y+RLE + ++T+T + L E G++P YGARPL+RAI
Sbjct: 763 FHPLGRAHLASIASIQLERLYKRLEERGYQVTITQPALEFLGETGFDPVYGARPLKRAIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
+ +E+ LA+ IL+G + G VT+D ++G
Sbjct: 823 QEIENPLAQQILSGKLIPGVPVTLDVENG 851
>gi|229083400|ref|ZP_04215749.1| Negative regulator of genetic competence [Bacillus cereus Rock3-44]
gi|228699909|gb|EEL52545.1| Negative regulator of genetic competence [Bacillus cereus Rock3-44]
Length = 811
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 146/274 (53%), Positives = 196/274 (71%), Gaps = 9/274 (3%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+RIDMSEYMEKH+ S+ GS
Sbjct: 531 GLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGS 590
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG+E GGQLTE VR +P+SV+L DE+EKAH DV N++LQ+L+DGR+TD KG+TVD
Sbjct: 591 PPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDF 650
Query: 129 KNTIIIMTSNIGDSVIARESILGSDQMERG---------VAEELRRRFRPEFLNRIDEVI 179
+NTI+IMTSN+G + R LG + + G V +EL++ FRPEFLNRIDE+I
Sbjct: 651 RNTIVIMTSNVGAEALKRNKHLGFNVQDEGRDYSDMKGKVMDELKKAFRPEFLNRIDEII 710
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF L K + EIV +M+ ++ RL+ + +EL +T + + ++G++ YGARPLRRAI
Sbjct: 711 VFHMLEKKHIQEIVTLMVNQLVNRLKEQEIELELTSKAIEAIADKGFDREYGARPLRRAI 770
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
+ +ED L+E +L G I+ G V D + VI
Sbjct: 771 QKHVEDRLSEELLKGAIEKGQKVVFDAEGESFVI 804
>gi|238765381|ref|ZP_04626305.1| Chaperone protein clpB 1 [Yersinia kristensenii ATCC 33638]
gi|238696423|gb|EEP89216.1| Chaperone protein clpB 1 [Yersinia kristensenii ATCC 33638]
Length = 857
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 149/269 (55%), Positives = 196/269 (72%), Gaps = 1/269 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F S +AMVRIDMSE+MEKH+
Sbjct: 583 AIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALAMFLFDSDDAMVRIDMSEFMEKHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA-RESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT++IMTSN+G +I R +M+ V E + FRPEF+NRIDEV+V
Sbjct: 703 QGRTVDFRNTVVIMTSNLGSDLIQERFGERSYTEMKEMVMEVVTHHFRPEFINRIDEVVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L + L I I L +Y+RLE + ++T+T + L E G++P YGARPL+RAI
Sbjct: 763 FHPLGRAHLASIASIQLARLYKRLEERGYQVTITQPALEFLGETGFDPVYGARPLKRAIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
+ +E+ LA+ IL+G + G VT+D ++G
Sbjct: 823 QEIENPLAQQILSGKLIPGVPVTLDVENG 851
>gi|224475673|ref|YP_002633279.1| ClpC ATPase family protein [Staphylococcus carnosus subsp. carnosus
TM300]
gi|222420280|emb|CAL27094.1| ClpC ATPase family protein [Staphylococcus carnosus subsp. carnosus
TM300]
Length = 821
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 146/271 (53%), Positives = 198/271 (73%), Gaps = 10/271 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDEDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGFLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEFLNR 174
VD +NT+I+MTSN+G + + G + + + +EL+ FRPEFLNR
Sbjct: 646 RVDFRNTVIVMTSNVGAQELQDQRFTGFGGGSSEGQDYETIRSTMLKELKNAFRPEFLNR 705
Query: 175 IDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARP 234
+D++IVF +LNK +L EIV M+ ++ +RL +++ ++VT K+K+ EEGY+P YGARP
Sbjct: 706 VDDIIVFHKLNKDELKEIVTKMVNKLTDRLSEQDINISVTEKAKEKIAEEGYDPQYGARP 765
Query: 235 LRRAIGRLLEDNLAEIILTGYIQVGDSVTMD 265
L RAI + +EDNL+E+IL G G V +D
Sbjct: 766 LIRAIQKTVEDNLSELILDGNQLEGKDVVVD 796
>gi|257068481|ref|YP_003154736.1| ATPase with chaperone activity, ATP-binding subunit
[Brachybacterium faecium DSM 4810]
gi|256559299|gb|ACU85146.1| ATPase with chaperone activity, ATP-binding subunit
[Brachybacterium faecium DSM 4810]
Length = 879
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 145/279 (51%), Positives = 204/279 (73%), Gaps = 10/279 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R R G++DP RP SF+F GPTGVGKTELA ALA FG +E+++++DMSE+ EKHT
Sbjct: 527 AIRRTRAGLKDPKRPGGSFIFAGPTGVGKTELAKALAEFLFGDEESLIQLDMSEFGEKHT 586
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ FGSPPGYVG++ GGQLTE VR +P SV+LFDE+EKAH D+ N +LQ+L+DGR+TD
Sbjct: 587 ASRLFGSPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHVDIFNSLLQILEDGRLTDS 646
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
+G+ VD KNTIIIMT+N+G IA+ +G ++M+ V EEL++ F+PEF
Sbjct: 647 QGRVVDFKNTIIIMTTNLGTRDIAKGVSIGFTAGGGLSTDYERMKSKVHEELKQHFKPEF 706
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNR+D+V+VF QL+K +++EIVD+ + ++ RL ++M LT++ K+ + E+GY+P G
Sbjct: 707 LNRVDDVVVFPQLSKEEIVEIVDLEIAKLETRLRDRDMSLTLSSEAKELVAEKGYDPVLG 766
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGG 270
ARPLRR I R +ED L+E IL G +QVGD + +D + G
Sbjct: 767 ARPLRRTIQRDIEDTLSERILFGQVQVGDEIVVDAEGEG 805
>gi|218781272|ref|YP_002432590.1| ATP-dependent chaperone ClpB [Desulfatibacillum alkenivorans AK-01]
gi|218762656|gb|ACL05122.1| ATP-dependent chaperone ClpB [Desulfatibacillum alkenivorans AK-01]
Length = 862
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 150/272 (55%), Positives = 195/272 (71%), Gaps = 1/272 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DPNRPI SF+F GPTGVGKTELA ALA F +A+VR+DMSEYMEKH+
Sbjct: 588 AVRRARSGLQDPNRPIGSFIFMGPTGVGKTELAKALAEFIFDDDQAIVRVDMSEYMEKHS 647
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GG LTEAVR RP+SVILFDEIEKAH DV NV+LQ+LDDGR+TDG
Sbjct: 648 VSRLIGAPPGYVGYDEGGYLTEAVRRRPYSVILFDEIEKAHPDVFNVLLQILDDGRMTDG 707
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVF 181
G+TVD KNTIIIMTSN+G I ++M R V + LR FRPEFLNR+DE ++F
Sbjct: 708 HGKTVDFKNTIIIMTSNVGSQFIQDLGSSNPEEMRRRVMDALRATFRPEFLNRVDETVIF 767
Query: 182 RQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGR 241
L+ L ++V I + +RL +++ L +T L ++GY+P+YGARPL+R I R
Sbjct: 768 NSLSVEDLAQVVRIQTDRLIKRLTDQHVNLVITEEALVLLGQKGYDPAYGARPLKRVIQR 827
Query: 242 LLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
LE+ LA +IL G I +VT+D G +++
Sbjct: 828 SLENQLALLILEGKIHPDSTVTVDA-QGDDIV 858
>gi|148270522|ref|YP_001244982.1| ATPase [Thermotoga petrophila RKU-1]
gi|147736066|gb|ABQ47406.1| ATPase AAA-2 domain protein [Thermotoga petrophila RKU-1]
Length = 791
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 156/270 (57%), Positives = 197/270 (72%), Gaps = 5/270 (1%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
T+ RARVGI++P RPI FLF GPTGVGKTELA LA FGS++AM+R+DMSEYMEKH+
Sbjct: 520 TIRRARVGIKNPRRPIGVFLFLGPTGVGKTELARTLADVLFGSEDAMIRLDMSEYMEKHS 579
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG+E GGQLTEAVR RP+SVIL DEIEKAH DV N++LQ+ +DGR+TDG
Sbjct: 580 VARLIGAPPGYVGYEEGGQLTEAVRKRPYSVILLDEIEKAHPDVFNILLQVFEDGRLTDG 639
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD-QMERGVAEELRRRFRPEFLNRIDEVIV 180
KG TVD +NTIIIMTSNIG I S G ++ER ELR F+PEFLNRID ++
Sbjct: 640 KGNTVDFRNTIIIMTSNIGSEKILEMSENGVRIEIER----ELRNTFKPEFLNRIDAIVY 695
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F+ L ++ +IV+IM++++ E L+ KN+ + +T K L E GY PS GARPLRR I
Sbjct: 696 FKPLTMEEVKKIVEIMVRQLQEILKEKNISIELTERAKDYLAEAGYVPSLGARPLRRIIE 755
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSGG 270
LE +A+ IL G I+ GD V +D D G
Sbjct: 756 LELESMIADKILEGEIKEGDRVLVDADEYG 785
>gi|83310659|ref|YP_420923.1| ATPase with chaperone activity [Magnetospirillum magneticum AMB-1]
gi|82945500|dbj|BAE50364.1| ATPase with chaperone activity [Magnetospirillum magneticum AMB-1]
Length = 790
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 149/282 (52%), Positives = 204/282 (72%), Gaps = 1/282 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DPNRPI SFLF GPTGVGKTEL ALA F + AMVR+DMSEYMEKH+
Sbjct: 509 AVRRARAGLQDPNRPIGSFLFLGPTGVGKTELTKALAEFMFDDETAMVRMDMSEYMEKHS 568
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG+E GG LTEAVR RP+ VILFDE+EKAH DV NV+LQ+LDDGR+TDG
Sbjct: 569 VARLIGAPPGYVGYEEGGALTEAVRRRPYQVILFDEVEKAHPDVFNVLLQVLDDGRLTDG 628
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA-RESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT+I++TSN+G ++A +E S ++ V E +R FRPEFLNR+DE+++
Sbjct: 629 QGRTVDFRNTLIVLTSNLGSEILANQEEGHDSAEVRAEVMEVVRASFRPEFLNRLDEILL 688
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F +L + + IVDI LK + L + + L++ + L E+GY+P+YGARPL+R I
Sbjct: 689 FHRLGRGDMSGIVDIQLKRLRALLADRKITLSLDAGAMEWLAEKGYDPAYGARPLKRVIQ 748
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSM 282
R L++ LA +IL G ++ GD+VT+ GG ++ R G +
Sbjct: 749 RALQNPLAGLILEGVVKDGDAVTVAAGEGGLLMNGRFTGGEV 790
>gi|159026800|emb|CAO86645.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 692
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 150/269 (55%), Positives = 191/269 (71%), Gaps = 6/269 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRP +SF+F GPTGVGKTELA ALA F ++EA+VRIDMSEYMEKH+
Sbjct: 409 AIQRSRAGLSDPNRPTASFIFLGPTGVGKTELAKALARNLFDTEEALVRIDMSEYMEKHS 468
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTEA+R RP+SVILFDEIEKAH DV NVMLQ+LDDGR+TD
Sbjct: 469 VSRLMGAPPGYVGYDEGGQLTEAIRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRLTDS 528
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS----DQMERGVAEELRRRFRPEFLNRIDE 177
+G VD KNTIIIMTSNIG I + G ++M+ V E +R FRPEFLNRIDE
Sbjct: 529 QGHLVDFKNTIIIMTSNIGSQYIL--DVAGDESRYEEMQARVMEAMRNSFRPEFLNRIDE 586
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
I+F L K QL IV + + +RL + + L + L E GY+P YGARPL+R
Sbjct: 587 TIIFHSLQKAQLRSIVKLQTANLSDRLMEQKLALKLADIALDYLAEIGYDPVYGARPLKR 646
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
A+ R +E +A+ IL G + GD++ +D
Sbjct: 647 AVQRYVETPIAKAILRGEFKGGDTIFVDV 675
>gi|289522311|ref|ZP_06439165.1| negative regulator of genetic competence ClpC/MecB [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289504147|gb|EFD25311.1| negative regulator of genetic competence ClpC/MecB [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 832
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/275 (52%), Positives = 201/275 (73%), Gaps = 10/275 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SFLF GPTGVGKTEL+ ALA FG + +M+R+DMSE+ME+H
Sbjct: 529 AIRRARSGLKDPQRPIGSFLFLGPTGVGKTELSKALAEFMFGDENSMIRLDMSEFMERHE 588
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK G+PPGYVG+E GG+LTEAVR RP++V+LFDEIEKAH DV N++LQ+L+DGR+TDG
Sbjct: 589 VSKLIGAPPGYVGYEEGGKLTEAVRRRPYAVVLFDEIEKAHPDVFNILLQILEDGRLTDG 648
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
+G+ VD KNT+IIMTSN+G + + +G + ++ + + +RR FRPEF
Sbjct: 649 QGRVVDFKNTVIIMTSNLGAQDLMKGPAIGFAAESEYQIDFEAAKKNILDAVRRTFRPEF 708
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
+NRIDE++VF+ L + +L++IVDIM+ ++ ERL K + + V+ K L+++GY P +G
Sbjct: 709 INRIDEIVVFKPLGEKELLQIVDIMIDDVAERLAEKGIFIEVSDAAKGFLLKKGYEPKFG 768
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
ARPLRR I R +ED LA+I+L G I+ + +D
Sbjct: 769 ARPLRRTIQRYIEDRLADILLEGKIKPESVIKVDV 803
>gi|281412829|ref|YP_003346908.1| ATPase AAA-2 domain protein [Thermotoga naphthophila RKU-10]
gi|281373932|gb|ADA67494.1| ATPase AAA-2 domain protein [Thermotoga naphthophila RKU-10]
Length = 791
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 156/270 (57%), Positives = 197/270 (72%), Gaps = 5/270 (1%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
T+ RARVGI++P RPI FLF GPTGVGKTELA LA FGS++AM+R+DMSEYMEKH+
Sbjct: 520 TIRRARVGIKNPRRPIGVFLFLGPTGVGKTELARTLADVLFGSEDAMIRLDMSEYMEKHS 579
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG+E GGQLTEAVR RP+SVIL DEIEKAH DV N++LQ+ +DGR+TDG
Sbjct: 580 VARLIGAPPGYVGYEEGGQLTEAVRKRPYSVILLDEIEKAHPDVFNILLQVFEDGRLTDG 639
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD-QMERGVAEELRRRFRPEFLNRIDEVIV 180
KG TVD +NTIIIMTSNIG I S G ++ER ELR F+PEFLNRID ++
Sbjct: 640 KGNTVDFRNTIIIMTSNIGSEKILEMSENGVRIEIER----ELRNTFKPEFLNRIDAIVY 695
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F+ L ++ +IV+IM++++ E L+ KN+ + +T K L E GY PS GARPLRR I
Sbjct: 696 FKPLTMEEVKKIVEIMVRQLQEILKEKNISIELTERAKDYLAEAGYVPSLGARPLRRIIE 755
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSGG 270
LE +A+ IL G I+ GD V +D D G
Sbjct: 756 LELESMIADKILEGEIKEGDRVLVDADEYG 785
>gi|375088340|ref|ZP_09734680.1| hypothetical protein HMPREF9703_00762 [Dolosigranulum pigrum ATCC
51524]
gi|374562378|gb|EHR33708.1| hypothetical protein HMPREF9703_00762 [Dolosigranulum pigrum ATCC
51524]
Length = 740
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 145/268 (54%), Positives = 198/268 (73%), Gaps = 6/268 (2%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
R+RVGI+DPNRP+ SFLF GPTGVGKTELA LA E F S++ M+R+DMSEYMEKH+VS+
Sbjct: 463 RSRVGIQDPNRPLGSFLFLGPTGVGKTELAKVLARELFESEDNMIRLDMSEYMEKHSVSQ 522
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPGYVG ++GGQLTEAVR P+S+ILFDE+EKAH+DV N++LQ+LDDG +TD KG+
Sbjct: 523 LIGSPPGYVGHDDGGQLTEAVRFNPYSIILFDEVEKAHKDVFNLLLQVLDDGVLTDAKGR 582
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSD------QMERGVAEELRRRFRPEFLNRIDEV 178
VD KNTI+I+TSNIG ++ + G D ++ + E LR+ FRPEFLNRIDEV
Sbjct: 583 RVDFKNTILILTSNIGAHLLLDQVKAGDDTPEISSEVREALHEMLRQHFRPEFLNRIDEV 642
Query: 179 IVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRA 238
+ F+ L+ + IV++ L + ERL+A+N+ L +T KK + +E Y+P+YGARP+RR
Sbjct: 643 VTFKPLSMAVMAGIVELQLATLQERLQAQNIVLAITDQAKKWIAQEAYDPAYGARPIRRF 702
Query: 239 IGRLLEDNLAEIILTGYIQVGDSVTMDC 266
+ LE +A++I+ I+ G +T+D
Sbjct: 703 LTTHLETPIAKMIIAEEIEAGQQLTIDV 730
>gi|206901239|ref|YP_002251189.1| negative regulator of genetic competence ClpC/mecB [Dictyoglomus
thermophilum H-6-12]
gi|206740342|gb|ACI19400.1| negative regulator of genetic competence ClpC/mecB [Dictyoglomus
thermophilum H-6-12]
Length = 823
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/285 (50%), Positives = 201/285 (70%), Gaps = 10/285 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G++DP RPI F+F GPTGVGKTELA ALA FG++ A++R DMSE+MEKHT
Sbjct: 531 AIRRSRSGLKDPRRPIGVFMFLGPTGVGKTELARALAEYLFGNENALIRFDMSEFMEKHT 590
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTE V RP+SVIL DEIEKAH DV N++LQ++D+G++TDG
Sbjct: 591 VSRLIGAPPGYVGYEEGGQLTEKVHRRPYSVILLDEIEKAHSDVFNILLQIMDEGQLTDG 650
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
G+ V KNTI+IMTSN G +E+ +G D+++ + E+++ FRPEF
Sbjct: 651 HGRRVSFKNTILIMTSNFGAEYFKQEASIGFASKEDREKSFDKIKELILSEMKKYFRPEF 710
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNR+DE++ FR L K L +I++++LK + ERL K ++L ++ K+ L+E+GY+P YG
Sbjct: 711 LNRLDEIVFFRPLTKDDLKQILELLLKPVRERLREKRLDLEISDEVKEFLLEKGYDPQYG 770
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYR 276
ARPL+R I +ED LAE IL G + GD + + D GN++ +
Sbjct: 771 ARPLKRTIQYYMEDPLAEFILQGEFKEGDVIKAELDKKGNIVFRK 815
>gi|253681670|ref|ZP_04862467.1| negative regulator of genetic competence ClpC/MecB [Clostridium
botulinum D str. 1873]
gi|253561382|gb|EES90834.1| negative regulator of genetic competence ClpC/MecB [Clostridium
botulinum D str. 1873]
Length = 813
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 151/266 (56%), Positives = 194/266 (72%), Gaps = 11/266 (4%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RARVG++DP RPI SF+F GPTGVGKTEL+ ALA FG + M+RIDMSEYMEKH VS+
Sbjct: 530 RARVGLKDPKRPIGSFIFLGPTGVGKTELSKALAEAMFGDENNMIRIDMSEYMEKHAVSR 589
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPGYVG + GGQLTE VR P+SV+LFDEIEKAH +V N++LQ+L+DGR+TD KG+
Sbjct: 590 LVGSPPGYVGHDEGGQLTEKVRRNPYSVVLFDEIEKAHPEVFNILLQILEDGRLTDSKGK 649
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG--------SDQMER---GVAEELRRRFRPEFLN 173
TVD +NTIII+TSN+G S I +++ LG D+ ER V EL+R FRPEFLN
Sbjct: 650 TVDFRNTIIILTSNVGASTINKQNTLGFSNSEDKAEDEYERMKDNVMVELKRSFRPEFLN 709
Query: 174 RIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGAR 233
RID++IVF LN+ L EIV +ML+E+ RL+ K + + +K L +G++ +YGAR
Sbjct: 710 RIDDIIVFHTLNQEDLKEIVKLMLQEVSSRLKNKEVYIEFDEKAEKLLANKGFDTAYGAR 769
Query: 234 PLRRAIGRLLEDNLAEIILTGYIQVG 259
PLRR I + +ED L+E IL G I+ G
Sbjct: 770 PLRRTITKTVEDKLSEEILKGVIKKG 795
>gi|443317310|ref|ZP_21046724.1| ATP-dependent chaperone ClpB [Leptolyngbya sp. PCC 6406]
gi|442783071|gb|ELR92997.1| ATP-dependent chaperone ClpB [Leptolyngbya sp. PCC 6406]
Length = 872
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 147/270 (54%), Positives = 196/270 (72%), Gaps = 6/270 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRPI+SF+F GPTGVGKTELA ALA F ++EAMVRIDMSEYMEKH
Sbjct: 589 AIQRSRAGLADPNRPIASFIFLGPTGVGKTELAKALAAYMFDTEEAMVRIDMSEYMEKHA 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVGFE GGQLTEA+R RP++VILFDEIEKAH DV N+MLQ+LDDGR+TD
Sbjct: 649 VARLIGAPPGYVGFEEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNIMLQVLDDGRLTDS 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQ----MERGVAEELRRRFRPEFLNRIDE 177
+G+TVD +N+++IMTSN+G I + G D+ M V E +R +FRPEFLNR+DE
Sbjct: 709 QGRTVDFRNSVVIMTSNVGSQYIL--DLAGDDEKYDLMRDRVMEAMRSQFRPEFLNRVDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+F L QL +IV + ++ + +RL + M LT++ + G++P YGARPL+R
Sbjct: 767 MIIFHSLRLEQLRQIVKLQIRRLEQRLSDRKMTLTLSEEALDWVAHVGFDPVYGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
A+ + LE LA+ IL G Q GD + D +
Sbjct: 827 AVQKELETPLAKGILRGEFQNGDRIYADVE 856
>gi|392969833|ref|ZP_10335245.1| ATP-dependent Clp protease ATP-binding subunit [Staphylococcus
equorum subsp. equorum Mu2]
gi|392512121|emb|CCI58441.1| ATP-dependent Clp protease ATP-binding subunit [Staphylococcus
equorum subsp. equorum Mu2]
Length = 820
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 148/272 (54%), Positives = 195/272 (71%), Gaps = 9/272 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +AM+R+DMSE+MEKH VS+
Sbjct: 526 RARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDDAMIRVDMSEFMEKHAVSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG ++GGQLTE VR +P+SVILFDEIEKAH DV N++LQ+LDDG +TD KG+
Sbjct: 586 LVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSDQMERG---------VAEELRRRFRPEFLNRI 175
VD +NT+IIMTSN+G + + G G + +EL+ FRPEFLNR+
Sbjct: 646 RVDFRNTVIIMTSNVGAQELQDQRFAGFGGASEGQDYETIRNTMMKELKNAFRPEFLNRV 705
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
D+ IVF +L+K +L EIV +M+ ++ RL +++ + VT K+K+ EEGY+P YGARPL
Sbjct: 706 DDTIVFHKLSKEELKEIVTMMINKLTGRLSEQDINIEVTDAAKEKIAEEGYDPEYGARPL 765
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RAI + +EDNL+E+IL G G V +D D
Sbjct: 766 IRAIQKTVEDNLSELILDGNQIEGKKVEIDHD 797
>gi|125539703|gb|EAY86098.1| hypothetical protein OsI_07468 [Oryza sativa Indica Group]
Length = 889
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 148/284 (52%), Positives = 201/284 (70%), Gaps = 11/284 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+RVG+ DP+RPI++ LF GPTGVGKTEL ALA YFGS+ AM+R+DMSEYME+HT
Sbjct: 589 AVKRSRVGLNDPDRPIATLLFCGPTGVGKTELTKALAASYFGSESAMLRLDMSEYMERHT 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGY+G+ G LTEAVR +P +V+L DEIEKAH D+ N++LQ+ +DG ++D
Sbjct: 649 VSKLIGSPPGYIGYGETGTLTEAVRRKPFTVVLLDEIEKAHPDIFNILLQIFEDGHLSDS 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR---------ESILGSD--QMERGVAEELRRRFRPE 170
+G+ V KNT+I+MTSN+G + I++ E S M+ V EEL+ FRPE
Sbjct: 709 QGRRVSFKNTLIVMTSNVGSTSISKGRRSMGFMTEDTESSSYVAMKSLVMEELKAFFRPE 768
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
LNRIDE++VFR L K Q++ I+DI+L+E+ RL A + L V+ K + EEGY+ SY
Sbjct: 769 LLNRIDEMVVFRPLEKTQMLAILDIILQEVKGRLLALGIGLEVSDAMKDLICEEGYDKSY 828
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
GARPLRRA+ L+ED ++E IL G + GD++ MD D+ G M
Sbjct: 829 GARPLRRAVTHLIEDVISEAILFGEYKPGDTILMDIDAAGKPCM 872
>gi|229917967|ref|YP_002886613.1| ATP-dependent chaperone ClpB [Exiguobacterium sp. AT1b]
gi|229469396|gb|ACQ71168.1| ATP-dependent chaperone ClpB [Exiguobacterium sp. AT1b]
Length = 863
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 146/269 (54%), Positives = 195/269 (72%), Gaps = 4/269 (1%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR GI+DPNRPI SFLF GPTGVGKTEL ALA F S++ +VR+DMSEYMEKH VS+
Sbjct: 586 RARAGIKDPNRPIGSFLFLGPTGVGKTELGKALAEAMFDSEDHIVRLDMSEYMEKHAVSR 645
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGY+G+E GGQLTEAVR P+SV+L DE+EKAH DV N++LQLLDDGR+TD G+
Sbjct: 646 LVGAPPGYIGYEEGGQLTEAVRRNPYSVLLLDEVEKAHPDVFNILLQLLDDGRLTDSHGR 705
Query: 125 TVDLKNTIIIMTSNIGDSVI---ARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVF 181
VD KNTI+IMTSNIG ++ AR+ ++ D+ ER V ++LRR FRPEFLNR+DE I+F
Sbjct: 706 IVDFKNTIVIMTSNIGADILLEAARDGVIDEDE-ERQVLDKLRRHFRPEFLNRVDETILF 764
Query: 182 RQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGR 241
L K Q+ +IV+ + + ERL +++ + +T K + +E Y P +GARP+ R + R
Sbjct: 765 HPLTKDQIGQIVEKAVGRMSERLTTRSIHIEITDAAKTFVADEAYEPQFGARPINRYVQR 824
Query: 242 LLEDNLAEIILTGYIQVGDSVTMDCDSGG 270
+E LA IL G ++ G +V +D ++G
Sbjct: 825 TIETKLARSILAGDVEDGQTVIIDVENGA 853
>gi|26518520|gb|AAN78327.1| ATP-dependent Clp protease ATP-binding subunit precursor [Oryza
sativa Indica Group]
Length = 938
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 148/284 (52%), Positives = 201/284 (70%), Gaps = 11/284 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+RVG+ DP+RPI++ LF GPTGVGKTEL ALA YFGS+ AM+R+DMSEYME+HT
Sbjct: 638 AVKRSRVGLNDPDRPIATLLFCGPTGVGKTELTKALAASYFGSESAMLRLDMSEYMERHT 697
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGY+G+ G LTEAVR +P +V+L DEIEKAH D+ N++LQ+ +DG ++D
Sbjct: 698 VSKLIGSPPGYIGYGETGTLTEAVRRKPFTVVLLDEIEKAHPDIFNILLQIFEDGHLSDS 757
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR---------ESILGSD--QMERGVAEELRRRFRPE 170
+G+ V KNT+I+MTSN+G + I++ E S M+ V EEL+ FRPE
Sbjct: 758 QGRRVSFKNTLIVMTSNVGSTSISKGRRSMGFMTEDTESSSYVAMKSLVMEELKAFFRPE 817
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
LNRIDE++VFR L K Q++ I+DI+L+E+ RL A + L V+ K + EEGY+ SY
Sbjct: 818 LLNRIDEMVVFRPLEKTQMLAILDIILQEVKGRLLALGIGLEVSDAMKDLICEEGYDKSY 877
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
GARPLRRA+ L+ED ++E IL G + GD++ MD D+ G M
Sbjct: 878 GARPLRRAVTHLIEDVISEAILFGEYKPGDTILMDIDAAGKPCM 921
>gi|116668736|ref|YP_829669.1| ATPase [Arthrobacter sp. FB24]
gi|116608845|gb|ABK01569.1| ATPase AAA-2 domain protein [Arthrobacter sp. FB24]
Length = 830
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 147/280 (52%), Positives = 200/280 (71%), Gaps = 10/280 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R R G++DP RP SF+F GPTGVGKTELA ALA FG ++A++ +DMSEY EKHT
Sbjct: 530 AIRRTRAGLKDPKRPGGSFIFAGPTGVGKTELAKALAEFLFGEEDALITLDMSEYSEKHT 589
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ FG+PPGYVG+E GGQLTE VR RP SV+LFDE+EKAH D+ N +LQ+L+DGR+TD
Sbjct: 590 VSRLFGAPPGYVGYEEGGQLTEKVRRRPFSVVLFDEVEKAHADLFNSLLQILEDGRLTDS 649
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR----------ESILGSDQMERGVAEELRRRFRPEF 171
+G+ VD KNT+IIMT+N+G I++ ++ G ++M V EEL++ FRPEF
Sbjct: 650 QGRVVDFKNTVIIMTTNLGTRDISKSVATGFQSGTDTQTGYNRMRARVTEELKQHFRPEF 709
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNR+D+V+VF QL + +++EIVD+ + + +RL+ K+M + +T K L GY+P+ G
Sbjct: 710 LNRVDDVVVFPQLTQDEIIEIVDLFVSRLEKRLKDKDMGIELTKAAKVLLATRGYDPAMG 769
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGN 271
ARPLRR I R +ED L+E IL G I GD V +D D G+
Sbjct: 770 ARPLRRTIQREIEDQLSEKILFGEIHAGDIVVVDVDGEGD 809
>gi|328954749|ref|YP_004372082.1| ATP-dependent chaperone ClpB [Coriobacterium glomerans PW2]
gi|328455073|gb|AEB06267.1| ATP-dependent chaperone ClpB [Coriobacterium glomerans PW2]
Length = 872
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 151/280 (53%), Positives = 191/280 (68%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SF F GPTGVGKTELA ALA F + A+VRIDMSEYMEK +
Sbjct: 587 AVRRSRAGLSDPNRPIGSFFFLGPTGVGKTELAKALAECLFDDERALVRIDMSEYMEKFS 646
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V + G+PPGYVG++ GGQLTEA+R RP+SVIL DE+EKAH DV NV+LQ+LDDGR+TDG
Sbjct: 647 VQRLIGAPPGYVGYDEGGQLTEAIRRRPYSVILLDEMEKAHPDVFNVLLQVLDDGRLTDG 706
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVF 181
+G+ V KNTI+IMTSN+ + IA S + M R V +R FRPEFLNRIDEV+VF
Sbjct: 707 QGRQVSFKNTIVIMTSNVASTAIAELSGRDDEGMRREVDAAMRATFRPEFLNRIDEVVVF 766
Query: 182 RQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGR 241
L Q+ +IVDI L ++ RL + M L VT K+ L G +P YGARPL+R I
Sbjct: 767 HPLGMAQIEKIVDIQLDDVRSRLANERMTLAVTPAAKQMLAVGGLDPVYGARPLKRLIQS 826
Query: 242 LLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGS 281
+ D +A I+ G + GD VT+D D+ GN + + S
Sbjct: 827 DVVDAIARAIIDGAVHEGDQVTVDVDTSGNFSVVQDATAS 866
>gi|425450141|ref|ZP_18829973.1| Chaperone [Microcystis aeruginosa PCC 7941]
gi|389769125|emb|CCI05925.1| Chaperone [Microcystis aeruginosa PCC 7941]
Length = 872
Score = 305 bits (781), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 150/269 (55%), Positives = 191/269 (71%), Gaps = 6/269 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRP +SF+F GPTGVGKTELA ALA F ++EA+VRIDMSEYMEKH+
Sbjct: 589 AIQRSRAGLSDPNRPTASFIFLGPTGVGKTELAKALARNLFDTEEALVRIDMSEYMEKHS 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTEA+R RP+SVILFDEIEKAH DV NVMLQ+LDDGR+TD
Sbjct: 649 VSRLMGAPPGYVGYDEGGQLTEAIRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRLTDS 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS----DQMERGVAEELRRRFRPEFLNRIDE 177
+G VD KNTIIIMTSNIG I + G ++M+ V E +R FRPEFLNRIDE
Sbjct: 709 QGHLVDFKNTIIIMTSNIGSQYIL--DVAGDESRYEEMQARVMEAMRNSFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
I+F L K QL IV + + +RL + + L + L E GY+P YGARPL+R
Sbjct: 767 TIIFHSLQKAQLRSIVKLQTANLSDRLMEQKLALKLADIALDYLAEIGYDPVYGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
A+ R +E +A+ IL G + GD++ +D
Sbjct: 827 AVQRYVETPIAKAILRGEFKGGDTIFVDV 855
>gi|259909394|ref|YP_002649750.1| protein disaggregation chaperone [Erwinia pyrifoliae Ep1/96]
gi|387872373|ref|YP_005803754.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Erwinia
pyrifoliae DSM 12163]
gi|224965016|emb|CAX56546.1| Chaperone protein [Erwinia pyrifoliae Ep1/96]
gi|283479467|emb|CAY75383.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Erwinia
pyrifoliae DSM 12163]
Length = 857
Score = 305 bits (781), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 149/278 (53%), Positives = 199/278 (71%), Gaps = 4/278 (1%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F S +AMVRIDMSE+MEKH+
Sbjct: 583 AIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA-RESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT++IMTSN+G +I R L +M+ V + FRPEF+NRIDE++V
Sbjct: 703 QGRTVDFRNTVVIMTSNLGSDLIQERFGALSYGEMKELVMSVVSHSFRPEFINRIDELVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L + + I I L+ +Y+RLE + L V+ ++L E GY+P YGARPL+RAI
Sbjct: 763 FHPLGEKHIASIARIQLQRLYQRLEERGFTLHVSDAALQQLGENGYDPVYGARPLKRAIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHR 278
+ +E+ LA+ IL+G + G ++ MD G I++ H+
Sbjct: 823 QQIENPLAQQILSGALVPGKTIEMDVKDG---IIFAHQ 857
>gi|148269862|ref|YP_001244322.1| ATPase [Thermotoga petrophila RKU-1]
gi|147735406|gb|ABQ46746.1| ATPase AAA-2 domain protein [Thermotoga petrophila RKU-1]
Length = 820
Score = 305 bits (781), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 149/266 (56%), Positives = 195/266 (73%), Gaps = 11/266 (4%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI FLF GPTGVGKTELA ALA FG + A++R DMSEYME+ +VS+ G+
Sbjct: 533 GLKDPRRPIGVFLFLGPTGVGKTELAKALAEYLFGDERALIRFDMSEYMERFSVSRLIGA 592
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG+E GG LTE VR RP SVILFDEIEKAH DV N++LQ++DDGR+TD +G+ VD
Sbjct: 593 PPGYVGYEEGGTLTEKVRRRPFSVILFDEIEKAHPDVFNILLQIMDDGRLTDSQGREVDF 652
Query: 129 KNTIIIMTSNIGDSVIARES----ILGSDQMERG-------VAEELRRRFRPEFLNRIDE 177
+NTIIIMTSNIG S I + +G + E+ V EE++R FRPEFLNRIDE
Sbjct: 653 RNTIIIMTSNIGSSYINKSKRTLGFVGDNNEEKEFEKIKDLVLEEVKRTFRPEFLNRIDE 712
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
I+F LNK + +I+DI+L+++ +RL KNM+L +T + K+ L+E+G++P YGARPL+R
Sbjct: 713 TIIFHPLNKEHIEQIIDILLRDLRKRLSEKNMKLVLTKSAKEFLVEKGFDPVYGARPLKR 772
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVT 263
AI R +ED L+E IL G GD++
Sbjct: 773 AIQRYVEDPLSEEILRGKFNEGDTIV 798
>gi|254456778|ref|ZP_05070206.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Sulfurimonas
gotlandica GD1]
gi|373868113|ref|ZP_09604511.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Sulfurimonas
gotlandica GD1]
gi|207085570|gb|EDZ62854.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Sulfurimonas
gotlandica GD1]
gi|372470214|gb|EHP30418.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Sulfurimonas
gotlandica GD1]
Length = 859
Score = 305 bits (781), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 141/268 (52%), Positives = 196/268 (73%), Gaps = 2/268 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R + G+ D N PI SFLF GPTGVGKT+ A LA F S+++M+RIDMSEYMEKH
Sbjct: 587 AIKRNKAGLSDANTPIGSFLFLGPTGVGKTQTAKTLAKFLFDSEDSMIRIDMSEYMEKHA 646
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+ PGYVG+E GGQLTEAVR +P+SVILFDE+EKAH DV N++LQ+LDDGR+TD
Sbjct: 647 VSRLVGAAPGYVGYEEGGQLTEAVRRKPYSVILFDEVEKAHPDVFNILLQVLDDGRLTDN 706
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVF 181
KG TVD NTIII+TSNI I SD+++ V EL++ F+PEFLNR+D++++F
Sbjct: 707 KGVTVDFSNTIIILTSNIASDKIINNP--ASDELDNMVLSELKQAFKPEFLNRLDDIVIF 764
Query: 182 RQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGR 241
L + Q+++IVDI +I ++E +++ELT++ + K + E G++P YGARPL+RA+
Sbjct: 765 NALGREQIIDIVDIFFSDISRKVEQRDIELTLSDSAKAYIAEAGFDPVYGARPLKRALYE 824
Query: 242 LLEDNLAEIILTGYIQVGDSVTMDCDSG 269
++ED LAE+IL G + G V D ++G
Sbjct: 825 IVEDRLAELILEGKVMEGSKVLFDIENG 852
>gi|443654507|ref|ZP_21131355.1| ATP-dependent chaperone ClpB [Microcystis aeruginosa DIANCHI905]
gi|443333775|gb|ELS48316.1| ATP-dependent chaperone ClpB [Microcystis aeruginosa DIANCHI905]
Length = 872
Score = 305 bits (781), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 150/269 (55%), Positives = 191/269 (71%), Gaps = 6/269 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRP +SF+F GPTGVGKTELA ALA F ++EA+VRIDMSEYMEKH+
Sbjct: 589 AIQRSRAGLSDPNRPTASFIFLGPTGVGKTELAKALARNLFDTEEALVRIDMSEYMEKHS 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTEA+R RP+SVILFDEIEKAH DV NVMLQ+LDDGR+TD
Sbjct: 649 VSRLMGAPPGYVGYDEGGQLTEAIRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRLTDS 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS----DQMERGVAEELRRRFRPEFLNRIDE 177
+G VD KNTIIIMTSNIG I + G ++M+ V E +R FRPEFLNRIDE
Sbjct: 709 QGHLVDFKNTIIIMTSNIGSQYIL--DVAGDESRYEEMQARVMEAMRNSFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
I+F L K QL IV + + +RL + + L + L E GY+P YGARPL+R
Sbjct: 767 TIIFHSLQKAQLRSIVKLQTANLSDRLMEQKLALKLADIALDYLAEIGYDPVYGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
A+ R +E +A+ IL G + GD++ +D
Sbjct: 827 AVQRYVETPIAKAILRGEFKGGDTIFVDV 855
>gi|425434409|ref|ZP_18814878.1| Chaperone [Microcystis aeruginosa PCC 9432]
gi|425460090|ref|ZP_18839572.1| Chaperone [Microcystis aeruginosa PCC 9808]
gi|389676061|emb|CCH94825.1| Chaperone [Microcystis aeruginosa PCC 9432]
gi|389827257|emb|CCI21612.1| Chaperone [Microcystis aeruginosa PCC 9808]
Length = 872
Score = 305 bits (781), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 150/269 (55%), Positives = 191/269 (71%), Gaps = 6/269 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRP +SF+F GPTGVGKTELA ALA F ++EA+VRIDMSEYMEKH+
Sbjct: 589 AIQRSRAGLSDPNRPTASFIFLGPTGVGKTELAKALARNLFDTEEALVRIDMSEYMEKHS 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTEA+R RP+SVILFDEIEKAH DV NVMLQ+LDDGR+TD
Sbjct: 649 VSRLMGAPPGYVGYDEGGQLTEAIRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRLTDS 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS----DQMERGVAEELRRRFRPEFLNRIDE 177
+G VD KNTIIIMTSNIG I + G ++M+ V E +R FRPEFLNRIDE
Sbjct: 709 QGHLVDFKNTIIIMTSNIGSQYIL--DVAGDESRYEEMQARVMEAMRNSFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
I+F L K QL IV + + +RL + + L + L E GY+P YGARPL+R
Sbjct: 767 TIIFHSLQKAQLRSIVKLQTANLSDRLMEQKLALKLADIALDYLAEIGYDPVYGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
A+ R +E +A+ IL G + GD++ +D
Sbjct: 827 AVQRYVETPIAKAILRGEFKGGDTIFVDV 855
>gi|253699226|ref|YP_003020415.1| ATP-dependent chaperone ClpB [Geobacter sp. M21]
gi|251774076|gb|ACT16657.1| ATP-dependent chaperone ClpB [Geobacter sp. M21]
Length = 862
Score = 305 bits (781), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 145/269 (53%), Positives = 195/269 (72%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G+ DPNRPI SF+F GPTGVGKTE A ALA F +A+VRIDMSEY EKHTV++
Sbjct: 590 RARSGLSDPNRPIGSFIFLGPTGVGKTETARALASFLFDDDQAVVRIDMSEYQEKHTVAR 649
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E GGQLTEAVR RP+ ++LFDEIEKAH +V NV LQ+LDDGR+TDG+G+
Sbjct: 650 LIGAPPGYVGYEEGGQLTEAVRRRPYCIVLFDEIEKAHPEVFNVFLQILDDGRLTDGQGR 709
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVFRQL 184
TVD KN++IIMTSN+G I + +M+ V E LR F+PEFLNR+DE++++ L
Sbjct: 710 TVDFKNSVIIMTSNLGSQWIQQYGATDYGKMQSEVMETLREAFKPEFLNRVDEIVIYHAL 769
Query: 185 NKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGRLLE 244
++ EIV I L+ + +RLE K + L VT ++ L EGY+P+YGARPL+RA+ R ++
Sbjct: 770 PLERIKEIVCIQLQSLTKRLEEKGIGLEVTEQAREFLAREGYDPAYGARPLKRALQRKIQ 829
Query: 245 DNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
D LA ++L GD+V ++ + G+ +
Sbjct: 830 DPLALMLLENKFAPGDTVRVELSAQGDFL 858
>gi|425469785|ref|ZP_18848692.1| Chaperone [Microcystis aeruginosa PCC 9701]
gi|389880328|emb|CCI38899.1| Chaperone [Microcystis aeruginosa PCC 9701]
Length = 872
Score = 305 bits (781), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 150/269 (55%), Positives = 191/269 (71%), Gaps = 6/269 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRP +SF+F GPTGVGKTELA ALA F ++EA+VRIDMSEYMEKH+
Sbjct: 589 AIQRSRAGLSDPNRPTASFIFLGPTGVGKTELAKALARNLFDTEEALVRIDMSEYMEKHS 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTEA+R RP+SVILFDEIEKAH DV NVMLQ+LDDGR+TD
Sbjct: 649 VSRLMGAPPGYVGYDEGGQLTEAIRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRLTDS 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS----DQMERGVAEELRRRFRPEFLNRIDE 177
+G VD KNTIIIMTSNIG I + G ++M+ V E +R FRPEFLNRIDE
Sbjct: 709 QGHLVDFKNTIIIMTSNIGSQYIL--DVAGDESRYEEMQARVMEAMRNSFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
I+F L K QL IV + + +RL + + L + L E GY+P YGARPL+R
Sbjct: 767 TIIFHSLQKAQLRSIVKLQTANLSDRLMEQKLALKLADIALDYLAEIGYDPVYGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
A+ R +E +A+ IL G + GD++ +D
Sbjct: 827 AVQRYVETPIAKAILRGEFKGGDTIFVDV 855
>gi|260681795|ref|YP_003213080.1| ATP-dependent Clp protease [Clostridium difficile CD196]
gi|260685392|ref|YP_003216525.1| ATP-dependent Clp protease [Clostridium difficile R20291]
gi|260207958|emb|CBA60088.1| ATP-dependent Clp protease [Clostridium difficile CD196]
gi|260211408|emb|CBE01489.1| ATP-dependent Clp protease [Clostridium difficile R20291]
Length = 749
Score = 305 bits (781), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 148/274 (54%), Positives = 198/274 (72%), Gaps = 13/274 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G++DPNRPI SFLF GPTGVGKTEL+ ALA FG + ++RIDMSEYMEKH
Sbjct: 462 AIRRSRAGLKDPNRPIGSFLFLGPTGVGKTELSKALAEVQFGDENQIIRIDMSEYMEKHA 521
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ GSPPGYVG + GGQLTE VR P+SVILFDEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 522 VSRMIGSPPGYVGHDEGGQLTEKVRRNPYSVILFDEIEKAHPDVFNILLQILDDGRLTDS 581
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG-------------SDQMERGVAEELRRRFR 168
KG+TVD KNTI+IMTSN+G S I R+ LG ++M+ + EL++RFR
Sbjct: 582 KGRTVDFKNTIVIMTSNVGASTIGRQKTLGFSIAKGDEEEKSQYEKMKENIMGELKQRFR 641
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNRID++IVF LN+ + +IV +M ++ ERL+ +++L ++ K + + G++
Sbjct: 642 PEFLNRIDDIIVFHSLNENHISKIVLLMAAKLQERLKEMDIKLEMSDEAVKLISKSGFDL 701
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSV 262
YGARPL+RA+ + LED L+E IL G ++ G +V
Sbjct: 702 EYGARPLKRALQKELEDELSEAILKGNVKKGSNV 735
>gi|217076366|ref|YP_002334082.1| ClpC ATPase [Thermosipho africanus TCF52B]
gi|217036219|gb|ACJ74741.1| ClpC ATPase [Thermosipho africanus TCF52B]
Length = 819
Score = 305 bits (781), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 148/279 (53%), Positives = 203/279 (72%), Gaps = 11/279 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++ RAR G++DP RP+ FLF GPTGVGKTELA LA FG ++A++R DMSEYMEK +
Sbjct: 524 SIRRARSGLKDPRRPVGVFLFLGPTGVGKTELAKTLAEYLFGDEKALIRFDMSEYMEKFS 583
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTE VR RP SVILFDEIEKAH DV N++LQ++DDGR+TD
Sbjct: 584 VSRLIGAPPGYVGYEEGGALTERVRRRPFSVILFDEIEKAHPDVFNLLLQIMDDGRLTDS 643
Query: 122 KGQTVDLKNTIIIMTSNIGDSVI-----------ARESILGSDQMERGVAEELRRRFRPE 170
+G VD +NTIIIMTSNIG S I +++S + +M+ V EE+++ FRPE
Sbjct: 644 QGHVVDFRNTIIIMTSNIGGSQIVSGKRSLGFVDSKDSNIEFKEMKEKVIEEVKKTFRPE 703
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNRIDEV+VF +L + + EI++I+LK+I +RL K + L ++ + K L++EGY+P+Y
Sbjct: 704 FLNRIDEVVVFHKLTENHIREIIEILLKDIRKRLSEKGILLELSKSAKDFLVQEGYDPAY 763
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
GARPL+RAI R +ED L+E +L G + D++ ++G
Sbjct: 764 GARPLKRAIQRHIEDPLSEELLKGKFKENDTIVCSYENG 802
>gi|270308576|ref|YP_003330634.1| ATP-dependent Clp protease ATP-binding subunit [Dehalococcoides sp.
VS]
gi|270154468|gb|ACZ62306.1| ATP-dependent Clp protease ATP-binding subunit [Dehalococcoides sp.
VS]
Length = 812
Score = 305 bits (781), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 151/293 (51%), Positives = 201/293 (68%), Gaps = 16/293 (5%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G++DP RPI SFLF GPTGVGKTELA +LA+ F + AMVR+DMSEY EKHT
Sbjct: 522 AIRRSRAGLKDPRRPIGSFLFLGPTGVGKTELARSLAWFLFDDETAMVRLDMSEYQEKHT 581
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTE VR RP+ VIL DEIEKAH DV N +LQLLDDGR+TDG
Sbjct: 582 VSRLVGAPPGYVGYDEGGQLTELVRRRPYRVILLDEIEKAHPDVYNTLLQLLDDGRLTDG 641
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG-----------SDQMER---GVAEELRRRF 167
+G+TVD KNT+IIMTSN G I RES LG D ER V E+++ F
Sbjct: 642 QGRTVDFKNTVIIMTSNAGIETIKRESALGFAIRNDDSKTRQDSYERMKDKVMAEVKKTF 701
Query: 168 RPEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYN 227
RPEF+NR+DE+IVF +L + Q+ +IVD M+K++ +RL+ + ++L +T K L + GY+
Sbjct: 702 RPEFINRVDEIIVFHELAEEQIRKIVDFMIKDVSKRLDERKLKLELTDAAKGWLAKVGYD 761
Query: 228 PSYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNG 280
P++GARPLRRAI R +E LA +L + ++ T+ D + + +
Sbjct: 762 PAFGARPLRRAIERYIESPLAGKLLRN--EFSENATILVDKADEALSFSQKTA 812
>gi|374581523|ref|ZP_09654617.1| ATP-dependent chaperone ClpB [Desulfosporosinus youngiae DSM 17734]
gi|374417605|gb|EHQ90040.1| ATP-dependent chaperone ClpB [Desulfosporosinus youngiae DSM 17734]
Length = 872
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 148/269 (55%), Positives = 193/269 (71%), Gaps = 2/269 (0%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DPNRP+ SFLF GPTGVGKTEL+ ALA F ++AMVRIDMSEYMEKHTVS+
Sbjct: 589 RARAGLQDPNRPLGSFLFLGPTGVGKTELSRALAEFLFDDEQAMVRIDMSEYMEKHTVSR 648
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E GGQLTEAVR +P+SVILFDE+EKAH DV NV+LQLLDDGR+TDG+G+
Sbjct: 649 LIGAPPGYVGYEEGGQLTEAVRRKPYSVILFDEVEKAHSDVYNVLLQLLDDGRLTDGQGR 708
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSDQME--RGVAEELRRRFRPEFLNRIDEVIVFR 182
V+ KNT++I+TSNI I + + + E + EELR FRPEFLNR+DE IVF
Sbjct: 709 IVNFKNTVVILTSNIASPTIQELTQRNASKQEVRTAINEELRHYFRPEFLNRLDETIVFH 768
Query: 183 QLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGRL 242
L + + +IV+I L ++ +RL + + ++ K +L EGY+P YGARPL+R I +
Sbjct: 769 PLGREHIGQIVEIQLGQLRQRLGESKLTMELSEKAKAQLTNEGYDPIYGARPLKRVIQQR 828
Query: 243 LEDNLAEIILTGYIQVGDSVTMDCDSGGN 271
L++ LA +L G G + +D D GN
Sbjct: 829 LQNPLALKLLQGEFMPGQEILVDIDEFGN 857
>gi|291550515|emb|CBL26777.1| ATPases with chaperone activity, ATP-binding subunit [Ruminococcus
torques L2-14]
Length = 814
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 152/280 (54%), Positives = 197/280 (70%), Gaps = 11/280 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R RVG++DP RPI SFLF GPTGVGKTEL+ ALA FG ++AM+R+DMSEYMEKH+
Sbjct: 527 AVKRGRVGLKDPKRPIGSFLFLGPTGVGKTELSKALAEALFGKEDAMIRVDMSEYMEKHS 586
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG E GGQL++ VR P+SVILFDEIEKAH DV NV+LQ+LDDG +TD
Sbjct: 587 VSKMIGSPPGYVGHEEGGQLSDQVRTHPYSVILFDEIEKAHPDVFNVLLQVLDDGHITDS 646
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG--------SD--QMERGVAEELRRRFRPEF 171
+G+ VD NT+IIMTSN G I LG SD +M++ V +E+++ FRPEF
Sbjct: 647 QGRKVDFSNTVIIMTSNAGAKAIVEPKKLGFATKEDPASDYKKMKQNVMDEVKQIFRPEF 706
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAK-NMELTVTHTFKKKLIEEGYNPSY 230
LNRIDE+IVF L K ++ +IV ++ + +RLE++ N+ L + + K ++E+G + Y
Sbjct: 707 LNRIDEIIVFHSLGKEEMKKIVSLLCNQFTKRLESQMNIHLKLRESAKALIVEKGTDAKY 766
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGG 270
GARPLRRA+ LED LA+ IL G IQ GD V G
Sbjct: 767 GARPLRRALQTELEDKLADAILNGEIQEGDHVAAGASKKG 806
>gi|238798951|ref|ZP_04642414.1| Chaperone protein clpB 1 [Yersinia mollaretii ATCC 43969]
gi|238717180|gb|EEQ09033.1| Chaperone protein clpB 1 [Yersinia mollaretii ATCC 43969]
Length = 857
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 148/269 (55%), Positives = 198/269 (73%), Gaps = 1/269 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F S +AMVRIDMSE+MEKH+
Sbjct: 583 AIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALATFLFDSDDAMVRIDMSEFMEKHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA-RESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT++IMTSN+G +I R +M+ V E + FRPEF+NRIDEV+V
Sbjct: 703 QGRTVDFRNTVVIMTSNLGSDLIQERFGERSYTEMKNMVMEVVTHHFRPEFINRIDEVVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L + L I I L+ +Y+RLE + ++T+T + + L E G++P YGARPL+RAI
Sbjct: 763 FHPLGRAHLASIASIQLERLYKRLEERGYQVTITQSALEFLGEAGFDPVYGARPLKRAIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
+ +E+ L++ IL+G + G VT+D ++G
Sbjct: 823 QEIENPLSQQILSGKLIPGVPVTLDVENG 851
>gi|384261932|ref|YP_005417118.1| Chaperone clpB [Rhodospirillum photometricum DSM 122]
gi|378403032|emb|CCG08148.1| Chaperone clpB [Rhodospirillum photometricum DSM 122]
Length = 902
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 148/273 (54%), Positives = 196/273 (71%), Gaps = 1/273 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G+ DPNRPI SFLF GPTGVGKTEL ALA F ++AMVRIDMSEYMEKH
Sbjct: 619 AVRRARAGLGDPNRPIGSFLFLGPTGVGKTELTRALAAFLFDDEQAMVRIDMSEYMEKHA 678
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GG LTEAVR RP+ VILFDE+EKAH DV NV+LQ+LDDGR+TDG
Sbjct: 679 VSRLIGAPPGYVGYDEGGALTEAVRRRPYQVILFDEVEKAHPDVFNVLLQVLDDGRLTDG 738
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMER-GVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT+I++TSN+G V+A + M R V E+R FRPEFLNR+DE+++
Sbjct: 739 QGRTVDFRNTLIVLTSNLGAEVLAGQPEGEDSAMVRDAVMAEVRLAFRPEFLNRLDEILL 798
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F +L + + IV+I K + ERL+ + M L + + L E GY+P+YGARPL+R +
Sbjct: 799 FHRLFRENMAGIVEIQTKRLAERLKERKMALEIDPQARDWLAEHGYDPAYGARPLKRVLQ 858
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
R LE+ LA ++L G + GD+V + + G V+
Sbjct: 859 RALENPLATMVLDGRLVDGDTVRVSANEWGLVV 891
>gi|289433587|ref|YP_003463459.1| ClpC ATPase [Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|289169831|emb|CBH26369.1| ClpC ATPase [Listeria seeligeri serovar 1/2b str. SLCC3954]
Length = 820
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 142/278 (51%), Positives = 201/278 (72%), Gaps = 9/278 (3%)
Query: 1 MTLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKH 60
+ + RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +++M+RIDMSEYMEK
Sbjct: 521 LAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDEDSMIRIDMSEYMEKF 580
Query: 61 TVSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTD 120
+ ++ G+PPGYVG+E GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 581 STARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEIEKAHPDVFNMLLQVLDDGRLTD 640
Query: 121 GKGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEF 171
KG+ VD +NT+IIMTSNIG + ++ +G ME V ++L++ FRPEF
Sbjct: 641 SKGRVVDFRNTVIIMTSNIGAQEMKQDKSMGFNVTDPLKDHKAMEHRVLQDLKQAFRPEF 700
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
+NRIDE IVF L + +L +IV ++ ++ +RL +++ + +T K K+ ++GY+P YG
Sbjct: 701 INRIDETIVFHSLQEKELKQIVTLLTAQLTKRLSERDIHVKLTEGAKSKIAKDGYDPEYG 760
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
ARPL+RAI + +ED L+E +L G I+VGD++ + G
Sbjct: 761 ARPLKRAIQKEVEDMLSEELLRGNIKVGDTIEIGVKDG 798
>gi|420747927|ref|ZP_15224009.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-64]
gi|391614450|gb|EIS56315.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-64]
Length = 857
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 147/269 (54%), Positives = 197/269 (73%), Gaps = 1/269 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F S +AMVRIDMSE+MEKH+
Sbjct: 583 AIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALATFLFDSDDAMVRIDMSEFMEKHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARE-SILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT++IMTSN+G +I + +M+ V + + FRPEF+NRIDEV+V
Sbjct: 703 QGRTVDFRNTVVIMTSNLGSDLIQEHFGQMNYSEMKTVVMDVVSHHFRPEFINRIDEVVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L + L I +I L+ +Y+RLE + E+ +T + L E G++P YGARPL+RAI
Sbjct: 763 FHPLGRAHLASIANIQLERLYKRLEERGYEVKITQPALEFLGEAGFDPVYGARPLKRAIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
+ +E+ LA+ IL+G + G VT+D ++G
Sbjct: 823 QEIENPLAQQILSGKLIPGIPVTLDVENG 851
>gi|226226898|ref|YP_002761004.1| chaperone ClpB [Gemmatimonas aurantiaca T-27]
gi|226090089|dbj|BAH38534.1| chaperone ClpB [Gemmatimonas aurantiaca T-27]
Length = 871
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 148/279 (53%), Positives = 197/279 (70%), Gaps = 3/279 (1%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G++DPNRPI SF+F GPTGVGKTE A ALA F + AMVRIDMSEYMEKH
Sbjct: 586 AVRRSRAGLQDPNRPIGSFIFLGPTGVGKTETARALAEFLFDDEHAMVRIDMSEYMEKHA 645
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG+E GGQLTEAVR RP+SVILFDEIEKAH DV N++LQLLDDGR+TD
Sbjct: 646 VARLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQLLDDGRLTDS 705
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESIL---GSDQMERGVAEELRRRFRPEFLNRIDEV 178
+G+TVD +N +IIMTSN+G +I ++E+ V LR F+PEFLNRID+V
Sbjct: 706 QGRTVDFRNAVIIMTSNVGSQLILERGQTDDGAWSRVEQEVLGALRGVFKPEFLNRIDDV 765
Query: 179 IVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRA 238
+VF L + +L IVD+ L + + L + + LT+T ++ L + GY+P +GARPL+RA
Sbjct: 766 VVFHPLGRGELDHIVDLQLAHLRKLLSDRKLSLTLTDAARQYLADAGYDPIFGARPLKRA 825
Query: 239 IGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRH 277
+ RLL++ LA +L G + GD++ D GG + + H
Sbjct: 826 VQRLLQNPLALAVLEGRFKDGDTIHADLVEGGEGLSFSH 864
>gi|257784988|ref|YP_003180205.1| ATPase AAA-2 domain-containing protein [Atopobium parvulum DSM
20469]
gi|257473495|gb|ACV51614.1| ATPase AAA-2 domain protein [Atopobium parvulum DSM 20469]
Length = 876
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 147/289 (50%), Positives = 208/289 (71%), Gaps = 10/289 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R ++DP RP SF+F GP+GVGKTELA ALA FGS++A++ DMSEYME+HT
Sbjct: 546 AIRRSRSPLKDPKRPGGSFIFLGPSGVGKTELAKALAEFLFGSEDALLSYDMSEYMERHT 605
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V+K G+PPGYVG++ GG+LT+AVR RP+SV+LFDEIEKAH DV N++LQ+LD+GR+TDG
Sbjct: 606 VAKLVGAPPGYVGYDEGGELTKAVRRRPYSVLLFDEIEKAHPDVFNILLQILDEGRLTDG 665
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG-SDQMERGVAE---------ELRRRFRPEF 171
+G+ VD NT++IMTSNIG IAR + +G S + +G+++ EL+R FRPEF
Sbjct: 666 QGRHVDFSNTVVIMTSNIGAREIARTNTMGFSSEGSKGLSDKEITSRVMSELKRGFRPEF 725
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNR+DE++VF+ L+ QL IVD+M+ E+ +RL A M + +T K + ++G +P YG
Sbjct: 726 LNRVDEIVVFKSLSAEQLRGIVDLMVLELRDRLIANGMSIELTEAAKDLIAKDGTDPVYG 785
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNG 280
ARPLRR I ++ED L+E +L+G GD V +D D+ G +++ G
Sbjct: 786 ARPLRRTIQSMIEDPLSEELLSGQWVAGDIVAVDVDAEGKKLVFTKTTG 834
>gi|255654110|ref|ZP_05399519.1| ATP-dependent Clp protease [Clostridium difficile QCD-23m63]
gi|296449851|ref|ZP_06891618.1| ATPase with chaperone activity, ATP-binding subunit [Clostridium
difficile NAP08]
gi|296877915|ref|ZP_06901935.1| ATPase with chaperone activity, ATP-binding subunit [Clostridium
difficile NAP07]
gi|296261338|gb|EFH08166.1| ATPase with chaperone activity, ATP-binding subunit [Clostridium
difficile NAP08]
gi|296431112|gb|EFH16939.1| ATPase with chaperone activity, ATP-binding subunit [Clostridium
difficile NAP07]
Length = 815
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 148/274 (54%), Positives = 198/274 (72%), Gaps = 13/274 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G++DPNRPI SFLF GPTGVGKTEL+ ALA FG + ++RIDMSEYMEKH
Sbjct: 528 AIRRSRAGLKDPNRPIGSFLFLGPTGVGKTELSKALAEVQFGDENQIIRIDMSEYMEKHA 587
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ GSPPGYVG + GGQLTE VR P+SVILFDEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 588 VSRMIGSPPGYVGHDEGGQLTEKVRRNPYSVILFDEIEKAHPDVFNILLQILDDGRLTDS 647
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG-------------SDQMERGVAEELRRRFR 168
KG+TVD KNTI+IMTSN+G S I R+ LG ++M+ + EL++RFR
Sbjct: 648 KGRTVDFKNTIVIMTSNVGASTIGRQKTLGFSIAKGDEEEKSQYEKMKENIMGELKQRFR 707
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNRID++IVF LN+ + +IV +M ++ ERL+ +++L ++ K + + G++
Sbjct: 708 PEFLNRIDDIIVFHSLNENHISKIVLLMAAKLQERLKEMDIKLEMSDEAVKLISKSGFDL 767
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSV 262
YGARPL+RA+ + LED L+E IL G ++ G +V
Sbjct: 768 EYGARPLKRALQKELEDELSEAILKGNVKKGSNV 801
>gi|222053891|ref|YP_002536253.1| ATP-dependent chaperone ClpB [Geobacter daltonii FRC-32]
gi|221563180|gb|ACM19152.1| ATP-dependent chaperone ClpB [Geobacter daltonii FRC-32]
Length = 866
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 143/274 (52%), Positives = 198/274 (72%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
R+R G+ DPNRPI SF+F GPTGVGKTE A ALA F +A+VRIDMSEY E+HTV++
Sbjct: 591 RSRSGLSDPNRPIGSFIFLGPTGVGKTETARALAEFLFDDDQAIVRIDMSEYQERHTVAR 650
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E GGQLTEA+R RP+S++LFDEIEKAH DV N++LQ+LDDGR+TDG+G+
Sbjct: 651 LIGAPPGYVGYEEGGQLTEAIRRRPYSIVLFDEIEKAHSDVFNILLQVLDDGRLTDGQGR 710
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVFRQL 184
TVD +NT+IIMTSN+G I + + +M V LR F+PEFLNRIDE+I++ L
Sbjct: 711 TVDFRNTVIIMTSNLGSQFIQQYASGDYAKMRTMVMGTLRENFKPEFLNRIDEIIIYHSL 770
Query: 185 NKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGRLLE 244
Q+ IV + +K + +RL +N+ L +T + L +EGY+P+YGARPL+R + + ++
Sbjct: 771 PLEQIKHIVSLQIKGLQKRLAERNLGLEITGRASEYLAKEGYDPAYGARPLKRTLQKKVQ 830
Query: 245 DNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHR 278
D LA ++L G Q GD+V +D G+ ++ + R
Sbjct: 831 DPLALMLLQGKFQEGDTVVVDVAMDGDSLVIKKR 864
>gi|411011697|ref|ZP_11388026.1| ATP-dependent chaperone protein ClpB [Aeromonas aquariorum AAK1]
Length = 857
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 147/270 (54%), Positives = 194/270 (71%), Gaps = 1/270 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F +++AMVRIDMSE+MEKH+
Sbjct: 583 AIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALAEFLFDTQDAMVRIDMSEFMEKHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA-RESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT++IMTSN+G +I S D+M+ + E L R FRPEF+NRIDE +V
Sbjct: 703 QGRTVDFRNTVVIMTSNLGSDLIQEHHSEKDYDEMKAMLMEVLARSFRPEFINRIDETVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L + + I I LK + RLEA+ E+ V+ KL+ G++P YGARPL+RAI
Sbjct: 763 FHPLGEEHIKSIARIQLKSLMSRLEAQGYEVEVSEALLNKLVHAGFDPVYGARPLKRAIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSGG 270
+E+ LA+ +L+G I G + + DS G
Sbjct: 823 HKVENPLAQALLSGRIVPGKKLLLGADSNG 852
>gi|440753054|ref|ZP_20932257.1| ATP-dependent chaperone ClpB [Microcystis aeruginosa TAIHU98]
gi|440177547|gb|ELP56820.1| ATP-dependent chaperone ClpB [Microcystis aeruginosa TAIHU98]
Length = 872
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 150/269 (55%), Positives = 191/269 (71%), Gaps = 6/269 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRP +SF+F GPTGVGKTELA ALA F ++EA+VRIDMSEYMEKH+
Sbjct: 589 AIQRSRAGLSDPNRPTASFIFLGPTGVGKTELAKALARNLFDTEEALVRIDMSEYMEKHS 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTEA+R RP+SVILFDEIEKAH DV NVMLQ+LDDGR+TD
Sbjct: 649 VSRLMGAPPGYVGYDEGGQLTEAIRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRLTDS 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS----DQMERGVAEELRRRFRPEFLNRIDE 177
+G VD KNTIIIMTSNIG I + G ++M+ V E +R FRPEFLNRIDE
Sbjct: 709 QGHLVDFKNTIIIMTSNIGSQYIL--DVAGDESRYEEMQARVMEAMRNSFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
I+F L K QL IV + + +RL + + L + L E GY+P YGARPL+R
Sbjct: 767 TIIFHSLQKAQLRSIVKLQTANLSDRLMEQKLALKLADIALDYLAEIGYDPVYGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
A+ R +E +A+ IL G + GD++ +D
Sbjct: 827 AVQRYVETPIAKAILRGEFKGGDTIFVDV 855
>gi|414078516|ref|YP_006997834.1| ATP-dependent chaperone ClpB [Anabaena sp. 90]
gi|413971932|gb|AFW96021.1| ATP-dependent chaperone ClpB [Anabaena sp. 90]
Length = 872
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 150/269 (55%), Positives = 194/269 (72%), Gaps = 6/269 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRPI+SF+F GPTGVGKTELA ALA F ++EA+VRIDMSEYM+KH
Sbjct: 589 AIQRSRAGLSDPNRPIASFVFLGPTGVGKTELAKALAAYMFDTEEALVRIDMSEYMDKHN 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEA+R RP++VILFDEIEKAH DV N+ LQ+LDDGRVTD
Sbjct: 649 VSRLIGAPPGYVGYEEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNIFLQILDDGRVTDA 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS----DQMERGVAEELRRRFRPEFLNRIDE 177
+G+TVD KN+IIIMTSNIG I I G D+M V E +R FRPEFLNR+DE
Sbjct: 709 QGRTVDFKNSIIIMTSNIGSQYIL--DISGDDTRYDEMRNRVMEAMRSSFRPEFLNRLDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+F L K +L IV + + + +RL + + L ++ + L E GY+P +GARPL+R
Sbjct: 767 LIIFHSLQKSELRNIVQLQVDRLKQRLIDRKISLKLSSSALDFLAEVGYDPVFGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
AI R LE +A+ IL G GD++ +D
Sbjct: 827 AIQRELETQIAKAILRGDFSDGDTIFVDV 855
>gi|298249049|ref|ZP_06972853.1| ATP-dependent chaperone ClpB [Ktedonobacter racemifer DSM 44963]
gi|297547053|gb|EFH80920.1| ATP-dependent chaperone ClpB [Ktedonobacter racemifer DSM 44963]
Length = 872
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 145/269 (53%), Positives = 203/269 (75%), Gaps = 1/269 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DPNRP++SFLF GPTGVGKTELA ALA F + A++RIDMSEYME+H+
Sbjct: 585 AIRRARAGLQDPNRPLASFLFLGPTGVGKTELARALAEFLFDDEHAIIRIDMSEYMERHS 644
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG+E GGQLTEAVR RP+SV+LFDEIEKA +V N++LQ+LDDGR+TDG
Sbjct: 645 VARLIGAPPGYVGYEEGGQLTEAVRRRPYSVVLFDEIEKAAPEVFNILLQVLDDGRLTDG 704
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEELR-RRFRPEFLNRIDEVIV 180
+G+TVD KNT++IMTSN+G ++ L D+++R V + LR FRPEF+NRIDE+IV
Sbjct: 705 QGRTVDFKNTVLIMTSNVGVLWLSELEKLDEDEVQRVVRQRLRGEGFRPEFINRIDEIIV 764
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
FR + + Q+ +IV+I L+ + RL +++ L +T T + +L E GY+ +GARPL+R I
Sbjct: 765 FRPIAREQMQDIVNIQLERLRLRLSERHITLQLTSTARDRLAEMGYDEEFGARPLKRVIQ 824
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
R +E+ +A +L G ++ GD+V +D G
Sbjct: 825 REVENRIARELLDGTVRDGDTVVIDVKDG 853
>gi|51595198|ref|YP_069389.1| protein disaggregation chaperone [Yersinia pseudotuberculosis IP
32953]
gi|108808757|ref|YP_652673.1| protein disaggregation chaperone [Yersinia pestis Antiqua]
gi|108810986|ref|YP_646753.1| protein disaggregation chaperone [Yersinia pestis Nepal516]
gi|145600170|ref|YP_001164246.1| protein disaggregation chaperone [Yersinia pestis Pestoides F]
gi|153947726|ref|YP_001402169.1| protein disaggregation chaperone [Yersinia pseudotuberculosis IP
31758]
gi|153997675|ref|ZP_02022775.1| Clp ATPase [Yersinia pestis CA88-4125]
gi|162419640|ref|YP_001607805.1| protein disaggregation chaperone [Yersinia pestis Angola]
gi|165926588|ref|ZP_02222420.1| chaperone ClpB [Yersinia pestis biovar Orientalis str. F1991016]
gi|166009977|ref|ZP_02230875.1| chaperone ClpB [Yersinia pestis biovar Antiqua str. E1979001]
gi|166213111|ref|ZP_02239146.1| chaperone ClpB [Yersinia pestis biovar Antiqua str. B42003004]
gi|167399363|ref|ZP_02304887.1| chaperone ClpB [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167421665|ref|ZP_02313418.1| chaperone ClpB [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167423529|ref|ZP_02315282.1| chaperone ClpB [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|167470275|ref|ZP_02334979.1| protein disaggregation chaperone [Yersinia pestis FV-1]
gi|170025564|ref|YP_001722069.1| protein disaggregation chaperone [Yersinia pseudotuberculosis
YPIII]
gi|186894216|ref|YP_001871328.1| protein disaggregation chaperone [Yersinia pseudotuberculosis
PB1/+]
gi|229838891|ref|ZP_04459050.1| Clp ATPase [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229896559|ref|ZP_04511726.1| Clp ATPase [Yersinia pestis Pestoides A]
gi|229899458|ref|ZP_04514601.1| Clp ATPase [Yersinia pestis biovar Orientalis str. India 195]
gi|229901202|ref|ZP_04516325.1| Clp ATPase [Yersinia pestis Nepal516]
gi|270489387|ref|ZP_06206461.1| ATP-dependent chaperone protein ClpB [Yersinia pestis KIM D27]
gi|294504989|ref|YP_003569051.1| Clp ATPase [Yersinia pestis Z176003]
gi|384127314|ref|YP_005509928.1| Clp ATPase [Yersinia pestis D182038]
gi|384138885|ref|YP_005521587.1| protein disaggregation chaperone [Yersinia pestis A1122]
gi|384415963|ref|YP_005625325.1| Clp ATPase [Yersinia pestis biovar Medievalis str. Harbin 35]
gi|420548363|ref|ZP_15046177.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-01]
gi|420553708|ref|ZP_15050949.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-02]
gi|420559314|ref|ZP_15055821.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-03]
gi|420564702|ref|ZP_15060658.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-04]
gi|420569749|ref|ZP_15065242.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-05]
gi|420575407|ref|ZP_15070361.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-06]
gi|420580714|ref|ZP_15075187.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-07]
gi|420586076|ref|ZP_15080044.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-08]
gi|420591186|ref|ZP_15084638.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-09]
gi|420596572|ref|ZP_15089481.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-10]
gi|420607664|ref|ZP_15099430.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-12]
gi|420613051|ref|ZP_15104260.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-13]
gi|420618438|ref|ZP_15108953.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-14]
gi|420623734|ref|ZP_15113729.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-15]
gi|420628814|ref|ZP_15118338.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-16]
gi|420633939|ref|ZP_15122930.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-19]
gi|420639152|ref|ZP_15127623.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-25]
gi|420644612|ref|ZP_15132606.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-29]
gi|420649905|ref|ZP_15137388.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-32]
gi|420655541|ref|ZP_15142452.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-34]
gi|420661053|ref|ZP_15147383.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-36]
gi|420666330|ref|ZP_15152136.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-42]
gi|420671193|ref|ZP_15156570.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-45]
gi|420676540|ref|ZP_15161430.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-46]
gi|420682170|ref|ZP_15166514.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-47]
gi|420687501|ref|ZP_15171252.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-48]
gi|420692731|ref|ZP_15175841.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-52]
gi|420698491|ref|ZP_15180908.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-53]
gi|420704343|ref|ZP_15185556.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-54]
gi|420709667|ref|ZP_15190294.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-55]
gi|420715143|ref|ZP_15195157.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-56]
gi|420720653|ref|ZP_15199880.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-58]
gi|420726119|ref|ZP_15204693.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-59]
gi|420731705|ref|ZP_15209713.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-60]
gi|420736721|ref|ZP_15214245.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-61]
gi|420742197|ref|ZP_15219166.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-63]
gi|420753353|ref|ZP_15228856.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-65]
gi|420759153|ref|ZP_15233516.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-66]
gi|420764404|ref|ZP_15238135.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-71]
gi|420769637|ref|ZP_15242829.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-72]
gi|420774617|ref|ZP_15247339.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-76]
gi|420780234|ref|ZP_15252283.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-88]
gi|420785835|ref|ZP_15257175.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-89]
gi|420790971|ref|ZP_15261792.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-90]
gi|420796494|ref|ZP_15266757.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-91]
gi|420801561|ref|ZP_15271310.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-92]
gi|420806908|ref|ZP_15276153.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-93]
gi|420817777|ref|ZP_15285946.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-95]
gi|420823093|ref|ZP_15290713.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-96]
gi|420828176|ref|ZP_15295282.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-98]
gi|420833864|ref|ZP_15300421.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-99]
gi|420838725|ref|ZP_15304812.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-100]
gi|420843920|ref|ZP_15309529.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-101]
gi|420849585|ref|ZP_15314612.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-102]
gi|420855254|ref|ZP_15319408.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-103]
gi|420860444|ref|ZP_15323983.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-113]
gi|421764775|ref|ZP_16201563.1| protein disaggregation chaperone [Yersinia pestis INS]
gi|51588480|emb|CAH20088.1| ATP-dependent protease, Hsp 100, part of novel multi-chaperone
system with DnaK, DnaJ, and GrpE [Yersinia
pseudotuberculosis IP 32953]
gi|108774634|gb|ABG17153.1| Clp ATPase [Yersinia pestis Nepal516]
gi|108780670|gb|ABG14728.1| Clp ATPase [Yersinia pestis Antiqua]
gi|145211866|gb|ABP41273.1| Clp ATPase [Yersinia pestis Pestoides F]
gi|149289312|gb|EDM39392.1| Clp ATPase [Yersinia pestis CA88-4125]
gi|152959221|gb|ABS46682.1| chaperone ClpB [Yersinia pseudotuberculosis IP 31758]
gi|162352455|gb|ABX86403.1| chaperone ClpB [Yersinia pestis Angola]
gi|165921516|gb|EDR38713.1| chaperone ClpB [Yersinia pestis biovar Orientalis str. F1991016]
gi|165990884|gb|EDR43185.1| chaperone ClpB [Yersinia pestis biovar Antiqua str. E1979001]
gi|166205898|gb|EDR50378.1| chaperone ClpB [Yersinia pestis biovar Antiqua str. B42003004]
gi|166960584|gb|EDR56605.1| chaperone ClpB [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167051867|gb|EDR63275.1| chaperone ClpB [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167057699|gb|EDR67445.1| chaperone ClpB [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|169752098|gb|ACA69616.1| ATP-dependent chaperone ClpB [Yersinia pseudotuberculosis YPIII]
gi|186697242|gb|ACC87871.1| ATP-dependent chaperone ClpB [Yersinia pseudotuberculosis PB1/+]
gi|229681927|gb|EEO78020.1| Clp ATPase [Yersinia pestis Nepal516]
gi|229687860|gb|EEO79933.1| Clp ATPase [Yersinia pestis biovar Orientalis str. India 195]
gi|229695257|gb|EEO85304.1| Clp ATPase [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229700337|gb|EEO88369.1| Clp ATPase [Yersinia pestis Pestoides A]
gi|262366978|gb|ACY63535.1| Clp ATPase [Yersinia pestis D182038]
gi|270337891|gb|EFA48668.1| ATP-dependent chaperone protein ClpB [Yersinia pestis KIM D27]
gi|294355448|gb|ADE65789.1| Clp ATPase [Yersinia pestis Z176003]
gi|320016467|gb|ADW00039.1| Clp ATPase [Yersinia pestis biovar Medievalis str. Harbin 35]
gi|342854014|gb|AEL72567.1| protein disaggregation chaperone [Yersinia pestis A1122]
gi|391423090|gb|EIQ85605.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-01]
gi|391423345|gb|EIQ85839.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-02]
gi|391423480|gb|EIQ85958.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-03]
gi|391438151|gb|EIQ98939.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-04]
gi|391439203|gb|EIQ99882.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-05]
gi|391443012|gb|EIR03370.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-06]
gi|391454927|gb|EIR14087.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-07]
gi|391455840|gb|EIR14924.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-08]
gi|391457773|gb|EIR16690.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-09]
gi|391470814|gb|EIR28445.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-10]
gi|391473165|gb|EIR30566.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-12]
gi|391486889|gb|EIR42879.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-13]
gi|391488482|gb|EIR44325.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-15]
gi|391488509|gb|EIR44344.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-14]
gi|391502865|gb|EIR57119.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-16]
gi|391503067|gb|EIR57296.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-19]
gi|391508126|gb|EIR61897.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-25]
gi|391518865|gb|EIR71549.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-29]
gi|391520255|gb|EIR72819.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-34]
gi|391521247|gb|EIR73729.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-32]
gi|391533240|gb|EIR84536.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-36]
gi|391536320|gb|EIR87315.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-42]
gi|391538825|gb|EIR89599.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-45]
gi|391551799|gb|EIS01281.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-46]
gi|391551880|gb|EIS01352.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-47]
gi|391552363|gb|EIS01793.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-48]
gi|391566625|gb|EIS14594.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-52]
gi|391567817|gb|EIS15635.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-53]
gi|391572166|gb|EIS19427.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-54]
gi|391581134|gb|EIS27050.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-55]
gi|391583185|gb|EIS28870.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-56]
gi|391593775|gb|EIS38035.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-58]
gi|391596756|gb|EIS40654.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-60]
gi|391597876|gb|EIS41656.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-59]
gi|391611119|gb|EIS53327.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-61]
gi|391611657|gb|EIS53811.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-63]
gi|391624356|gb|EIS65004.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-65]
gi|391628755|gb|EIS68776.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-66]
gi|391635025|gb|EIS74231.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-71]
gi|391637031|gb|EIS75996.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-72]
gi|391647158|gb|EIS84820.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-76]
gi|391650621|gb|EIS87885.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-88]
gi|391655003|gb|EIS91787.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-89]
gi|391659979|gb|EIS96191.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-90]
gi|391667560|gb|EIT02880.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-91]
gi|391677021|gb|EIT11368.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-93]
gi|391677724|gb|EIT12005.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-92]
gi|391691050|gb|EIT24012.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-95]
gi|391694003|gb|EIT26705.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-96]
gi|391695490|gb|EIT28056.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-98]
gi|391707961|gb|EIT39259.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-99]
gi|391711122|gb|EIT42111.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-100]
gi|391712084|gb|EIT42995.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-101]
gi|391723962|gb|EIT53588.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-102]
gi|391724696|gb|EIT54249.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-103]
gi|391727374|gb|EIT56603.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-113]
gi|411174326|gb|EKS44359.1| protein disaggregation chaperone [Yersinia pestis INS]
Length = 857
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 147/269 (54%), Positives = 197/269 (73%), Gaps = 1/269 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F S +AMVRIDMSE+MEKH+
Sbjct: 583 AIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALATFLFDSDDAMVRIDMSEFMEKHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARE-SILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT++IMTSN+G +I + +M+ V + + FRPEF+NRIDEV+V
Sbjct: 703 QGRTVDFRNTVVIMTSNLGSDLIQEHFGQMNYSEMKTVVMDVVSHHFRPEFINRIDEVVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L + L I +I L+ +Y+RLE + E+ +T + L E G++P YGARPL+RAI
Sbjct: 763 FHPLGRAHLASIANIQLERLYKRLEERGYEVKITQPALEFLGEAGFDPVYGARPLKRAIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
+ +E+ LA+ IL+G + G VT+D ++G
Sbjct: 823 QEIENPLAQQILSGKLIPGIPVTLDVENG 851
>gi|16799341|ref|NP_469609.1| endopeptidase Clp ATP-binding chain C [Listeria innocua Clip11262]
gi|423099292|ref|ZP_17086999.1| negative regulator of genetic competence ClpC/MecB [Listeria
innocua ATCC 33091]
gi|16412693|emb|CAC95497.1| endopeptidase Clp ATP-binding chain C [Listeria innocua Clip11262]
gi|370794190|gb|EHN61972.1| negative regulator of genetic competence ClpC/MecB [Listeria
innocua ATCC 33091]
Length = 820
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 143/278 (51%), Positives = 201/278 (72%), Gaps = 9/278 (3%)
Query: 1 MTLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKH 60
+ + RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +++M+RIDMSEYMEK
Sbjct: 521 LAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDEDSMIRIDMSEYMEKF 580
Query: 61 TVSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTD 120
+ ++ G+PPGYVG+E GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 581 STARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEIEKAHPDVFNMLLQVLDDGRLTD 640
Query: 121 GKGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEF 171
KG+ VD +NT+IIMTSNIG + ++ +G ME V ++L++ FRPEF
Sbjct: 641 SKGRVVDFRNTVIIMTSNIGAQEMKQDKSMGFNVIDPLKDHKAMEHRVLQDLKQAFRPEF 700
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
+NRIDE IVF L + +L +IV ++ ++ +RL +++ + +T K K+ ++GY+P YG
Sbjct: 701 INRIDETIVFHSLQEKELKQIVTLLTSQLTKRLAERDIHVKLTEGAKAKIAKDGYDPEYG 760
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
ARPL+RAI + +ED L+E +L G I+VGD+V + G
Sbjct: 761 ARPLKRAIQKEVEDMLSEELLRGNIKVGDNVEIGVKDG 798
>gi|425453742|ref|ZP_18833495.1| Chaperone [Microcystis aeruginosa PCC 9807]
gi|389800393|emb|CCI20267.1| Chaperone [Microcystis aeruginosa PCC 9807]
Length = 872
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 150/269 (55%), Positives = 191/269 (71%), Gaps = 6/269 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRP +SF+F GPTGVGKTELA ALA F ++EA+VRIDMSEYMEKH+
Sbjct: 589 AIQRSRAGLSDPNRPTASFIFLGPTGVGKTELAKALARNLFDTEEALVRIDMSEYMEKHS 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTEA+R RP+SVILFDEIEKAH DV NVMLQ+LDDGR+TD
Sbjct: 649 VSRLMGAPPGYVGYDEGGQLTEAIRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRLTDS 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS----DQMERGVAEELRRRFRPEFLNRIDE 177
+G VD KNTIIIMTSNIG I + G ++M+ V E +R FRPEFLNRIDE
Sbjct: 709 QGHLVDFKNTIIIMTSNIGSQYIL--DVAGDESRYEEMQARVMEAMRNSFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
I+F L K QL IV + + + +RL + + L L E GY+P YGARPL+R
Sbjct: 767 TIIFHSLQKAQLRSIVKLQIGNLSDRLMEQKLALKFADIALDYLAEIGYDPVYGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
A+ R +E +A+ IL G + GD++ +D
Sbjct: 827 AVQRYVETPIAKAILRGEFKGGDTIFVDV 855
>gi|384123457|ref|YP_005506077.1| Clp ATPase [Yersinia pestis D106004]
gi|262363053|gb|ACY59774.1| Clp ATPase [Yersinia pestis D106004]
Length = 733
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 147/269 (54%), Positives = 197/269 (73%), Gaps = 1/269 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F S +AMVRIDMSE+MEKH+
Sbjct: 459 AIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALATFLFDSDDAMVRIDMSEFMEKHS 518
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 519 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 578
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARE-SILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT++IMTSN+G +I + +M+ V + + FRPEF+NRIDEV+V
Sbjct: 579 QGRTVDFRNTVVIMTSNLGSDLIQEHFGQMNYSEMKTVVMDVVSHHFRPEFINRIDEVVV 638
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L + L I +I L+ +Y+RLE + E+ +T + L E G++P YGARPL+RAI
Sbjct: 639 FHPLGRAHLASIANIQLERLYKRLEERGYEVKITQPALEFLGEAGFDPVYGARPLKRAIQ 698
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
+ +E+ LA+ IL+G + G VT+D ++G
Sbjct: 699 QEIENPLAQQILSGKLIPGIPVTLDVENG 727
>gi|88854764|ref|ZP_01129430.1| ATP-dependent Clp protease, ATP-binding subunit [marine
actinobacterium PHSC20C1]
gi|88815925|gb|EAR25781.1| ATP-dependent Clp protease, ATP-binding subunit [marine
actinobacterium PHSC20C1]
Length = 825
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 146/273 (53%), Positives = 199/273 (72%), Gaps = 9/273 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
T+ R R G++DPNRP SF+F GPTGVGKTELA ALA F + AM+ +DMSEY EKHT
Sbjct: 527 TIRRTRAGLKDPNRPSGSFIFAGPTGVGKTELAKALAEFLFDDESAMISLDMSEYGEKHT 586
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ FG+PPG+VGFE GGQLTE VR +P SV+LFDEIEKAH D+ N +LQ+L++GR+TDG
Sbjct: 587 VSRLFGAPPGFVGFEEGGQLTEKVRRKPFSVVLFDEIEKAHPDIFNSLLQILEEGRLTDG 646
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR---------ESILGSDQMERGVAEELRRRFRPEFL 172
+G+ +D KNT+IIMT+N+G I +S D+M V EEL++ F+PEFL
Sbjct: 647 QGRVIDFKNTVIIMTTNLGTKDITAGPMGFQVEGDSATSYDRMRGKVVEELKKHFKPEFL 706
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NR+DE IVF QL+K +L++IVD+ +K + ER+ +++ + +T K++LIE G++P+ GA
Sbjct: 707 NRVDETIVFPQLSKPELLQIVDLFIKRLSERMMDRDLTVELTVPAKERLIEVGFDPTLGA 766
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMD 265
RPLRRA+ +ED L+E IL G + GD V +D
Sbjct: 767 RPLRRAVQHEVEDALSEKILHGELNAGDHVHVD 799
>gi|94265726|ref|ZP_01289463.1| AAA ATPase, central region:Clp, N terminal [delta proteobacterium
MLMS-1]
gi|93453739|gb|EAT04115.1| AAA ATPase, central region:Clp, N terminal [delta proteobacterium
MLMS-1]
Length = 867
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 146/278 (52%), Positives = 203/278 (73%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DPNRP+ SF+F GPTGVGKTELA +LA F +++AM+R+DMSE+MEKH+
Sbjct: 588 AVRRARAGLQDPNRPLGSFIFMGPTGVGKTELARSLAAFLFDTEKAMIRLDMSEFMEKHS 647
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG+E GG LTEAVR RP+SVILFDEIEKAH DV NV+LQ+LDDGR+TDG
Sbjct: 648 VARLIGAPPGYVGYEEGGYLTEAVRRRPYSVILFDEIEKAHPDVFNVLLQILDDGRMTDG 707
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVF 181
+G+TVD KNTI+IMTSN+G +I ++++ V E L +FRPEFLNR+DE+I+F
Sbjct: 708 QGRTVDFKNTILIMTSNLGSQLIMELGEARREEIKTRVDEILHAQFRPEFLNRLDEIIIF 767
Query: 182 RQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGR 241
L++ L +I+D+ + + RL ++ ++ +T K+ LIE GY+P+YGARPL+RAI R
Sbjct: 768 HALSREDLRQIIDLQAELLTGRLAERHYQIELTPAAKEFLIEVGYDPNYGARPLKRAIQR 827
Query: 242 LLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRN 279
+ D LA IL G GD++ ++ G + + R
Sbjct: 828 HVLDALAMKILEGNFAEGDTIVVERWEGAESLSFERRQ 865
>gi|256826231|ref|YP_003150191.1| ATPase with chaperone activity [Kytococcus sedentarius DSM 20547]
gi|256689624|gb|ACV07426.1| ATPase with chaperone activity, ATP-binding subunit [Kytococcus
sedentarius DSM 20547]
Length = 866
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 146/276 (52%), Positives = 202/276 (73%), Gaps = 10/276 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R R G++DP RP SF+F GPTGVGKTELA ALA FG ++A++++DMSE+ EKHT
Sbjct: 534 AIRRTRAGLKDPRRPGGSFIFAGPTGVGKTELAKALAEFLFGDEDALIQLDMSEFGEKHT 593
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ FGSPPGYVG++ GGQLTE VR +P SV+LFDE+EKAH DV N +LQ+L+DGR+TD
Sbjct: 594 VSRMFGSPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHPDVFNSLLQILEDGRLTDS 653
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
+G+TVD KNTIIIMT+N+G IA+ LG ++++ V+EEL++ FRPEF
Sbjct: 654 QGRTVDFKNTIIIMTTNLGARDIAKGVSLGFSAGPESGTDYERLKAKVSEELKQHFRPEF 713
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNR+D+ +VF QL++ ++++IVD+M+ + ERL K+M + +T K+ L + GY+P G
Sbjct: 714 LNRVDDTVVFPQLSQAEIVQIVDLMIDRLSERLADKDMAIELTQDAKELLAKRGYDPVLG 773
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
ARPLRRAI R +ED ++E IL G GD + +D D
Sbjct: 774 ARPLRRAIQREIEDVISEKILYGEFAAGDIIEVDVD 809
>gi|218930300|ref|YP_002348175.1| protein disaggregation chaperone [Yersinia pestis CO92]
gi|54035780|sp|Q74X11.2|CLPB_YERPE RecName: Full=Chaperone protein ClpB
gi|115348911|emb|CAL21868.1| Clp ATPase [Yersinia pestis CO92]
Length = 857
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 147/269 (54%), Positives = 197/269 (73%), Gaps = 1/269 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F S +AMVRIDMSE+MEKH+
Sbjct: 583 AIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALATFLFDSDDAMVRIDMSEFMEKHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARE-SILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT++IMTSN+G +I + +M+ V + + FRPEF+NRIDEV+V
Sbjct: 703 QGRTVDFRNTVVIMTSNLGSDLIQEHFGQMNYSEMKTVVMDVVSHHFRPEFINRIDEVVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L + L I +I L+ +Y+RLE + E+ +T + L E G++P YGARPL+RAI
Sbjct: 763 FHPLGRAHLASIANIQLERLYKRLEERGYEVKITQPALEFLGEAGFDPVYGARPLKRAIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
+ +E+ LA+ IL+G + G VT+D ++G
Sbjct: 823 QEIENPLAQQILSGKLIPGIPVTLDVENG 851
>gi|159896561|ref|YP_001542808.1| ATPase [Herpetosiphon aurantiacus DSM 785]
gi|159889600|gb|ABX02680.1| ATPase AAA-2 domain protein [Herpetosiphon aurantiacus DSM 785]
Length = 822
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 149/281 (53%), Positives = 202/281 (71%), Gaps = 9/281 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA F ++AM R+DMSEY E+HT
Sbjct: 525 AIRRARSGLKDPRRPIGSFIFVGPTGVGKTELAKALAAFLFDDEDAMTRVDMSEYQERHT 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTE++R RP+ VILFDEIEKAH DV N +LQ+LDDGR+TD
Sbjct: 585 VSRLVGAPPGYVGYDEGGQLTESIRRRPYQVILFDEIEKAHGDVFNSLLQVLDDGRLTDA 644
Query: 122 KGQTVDLKNTIIIMTSNIG-DSVIA------RESILGSDQMERGVAEELRRRFRPEFLNR 174
+G+TVD +NT+IIMTSN+G D + A RE+ + ++ + V + ++R FRPEFLNR
Sbjct: 645 QGRTVDFRNTVIIMTSNVGTDEIRAGSIGFRRENKIDMGEVRKRVDDAMKRTFRPEFLNR 704
Query: 175 IDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARP 234
IDE+I+F+ L +L I+DI+ E+ RL + L +T K+ L++EGYNP YGARP
Sbjct: 705 IDEIILFKPLEMAELTGIIDILASEVAGRLGELQITLHLTRAAKELLVQEGYNPVYGARP 764
Query: 235 LRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMY 275
LRR + RL+E L+ +L G GD V +D ++G VI++
Sbjct: 765 LRRTLQRLVETPLSRALLKGEFSAGDVVEVDVENG--VIIF 803
>gi|126697592|ref|YP_001086489.1| class III stress response-related ATPase [Clostridium difficile
630]
gi|254973677|ref|ZP_05270149.1| ATP-dependent Clp protease [Clostridium difficile QCD-66c26]
gi|255091069|ref|ZP_05320547.1| ATP-dependent Clp protease [Clostridium difficile CIP 107932]
gi|255099184|ref|ZP_05328161.1| ATP-dependent Clp protease [Clostridium difficile QCD-63q42]
gi|255304967|ref|ZP_05349139.1| ATP-dependent Clp protease [Clostridium difficile ATCC 43255]
gi|255312722|ref|ZP_05354305.1| ATP-dependent Clp protease [Clostridium difficile QCD-76w55]
gi|255515482|ref|ZP_05383158.1| ATP-dependent Clp protease [Clostridium difficile QCD-97b34]
gi|255648575|ref|ZP_05395477.1| ATP-dependent Clp protease [Clostridium difficile QCD-37x79]
gi|306518705|ref|ZP_07405052.1| ATP-dependent Clp protease [Clostridium difficile QCD-32g58]
gi|384359346|ref|YP_006197198.1| ATP-dependent Clp protease [Clostridium difficile BI1]
gi|423080678|ref|ZP_17069297.1| negative regulator of genetic competence ClpC/MecB [Clostridium
difficile 002-P50-2011]
gi|423085125|ref|ZP_17073582.1| negative regulator of genetic competence ClpC/MecB [Clostridium
difficile 050-P50-2011]
gi|423089367|ref|ZP_17077727.1| negative regulator of genetic competence ClpC/MecB [Clostridium
difficile 70-100-2010]
gi|115249029|emb|CAJ66840.1| class III stress response-related ATPase, AAA+ superfamily
[Clostridium difficile 630]
gi|357550773|gb|EHJ32582.1| negative regulator of genetic competence ClpC/MecB [Clostridium
difficile 050-P50-2011]
gi|357552742|gb|EHJ34509.1| negative regulator of genetic competence ClpC/MecB [Clostridium
difficile 002-P50-2011]
gi|357558303|gb|EHJ39802.1| negative regulator of genetic competence ClpC/MecB [Clostridium
difficile 70-100-2010]
Length = 815
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 148/274 (54%), Positives = 198/274 (72%), Gaps = 13/274 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G++DPNRPI SFLF GPTGVGKTEL+ ALA FG + ++RIDMSEYMEKH
Sbjct: 528 AIRRSRAGLKDPNRPIGSFLFLGPTGVGKTELSKALAEVQFGDENQIIRIDMSEYMEKHA 587
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ GSPPGYVG + GGQLTE VR P+SVILFDEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 588 VSRMIGSPPGYVGHDEGGQLTEKVRRNPYSVILFDEIEKAHPDVFNILLQILDDGRLTDS 647
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG-------------SDQMERGVAEELRRRFR 168
KG+TVD KNTI+IMTSN+G S I R+ LG ++M+ + EL++RFR
Sbjct: 648 KGRTVDFKNTIVIMTSNVGASTIGRQKTLGFSIAKGDEEEKSQYEKMKENIMGELKQRFR 707
Query: 169 PEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNP 228
PEFLNRID++IVF LN+ + +IV +M ++ ERL+ +++L ++ K + + G++
Sbjct: 708 PEFLNRIDDIIVFHSLNENHISKIVLLMAAKLQERLKEMDIKLEMSDEAVKLISKSGFDL 767
Query: 229 SYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSV 262
YGARPL+RA+ + LED L+E IL G ++ G +V
Sbjct: 768 EYGARPLKRALQKELEDELSEAILKGNVKKGSNV 801
>gi|323339619|ref|ZP_08079892.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
ruminis ATCC 25644]
gi|417974548|ref|ZP_12615358.1| negative regulator of genetic competence [Lactobacillus ruminis
ATCC 25644]
gi|323092944|gb|EFZ35543.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
ruminis ATCC 25644]
gi|346329069|gb|EGX97378.1| negative regulator of genetic competence [Lactobacillus ruminis
ATCC 25644]
Length = 834
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 143/277 (51%), Positives = 201/277 (72%), Gaps = 9/277 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G+ DP RPI SF+F GPTG GKTELA ALA FGS++AM+RIDMSEYMEK++
Sbjct: 533 AIRRARSGLSDPTRPIGSFMFLGPTGAGKTELAKALAEAMFGSEDAMIRIDMSEYMEKYS 592
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ G+PPGYVG++ GGQLTE VR++P+SV+L DE+EKAH DV N++LQ+LDDG +TD
Sbjct: 593 TSRLIGAPPGYVGYDEGGQLTEKVRNKPYSVVLLDEVEKAHPDVFNILLQVLDDGYLTDS 652
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---SD------QMERGVAEELRRRFRPEFL 172
KG+ V+ +NTIIIMTSN+G + + E +G +D M + E L++RFRPEFL
Sbjct: 653 KGRKVNFRNTIIIMTSNLGATALRDEKSVGFGATDLSNDYAAMSSKIRESLKKRFRPEFL 712
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE+++F L K +L +IV +M K++ +R+ + ++L VT + + + G++P YGA
Sbjct: 713 NRIDEIVIFHSLEKDELHQIVKLMAKDVIKRIAEQKVKLKVTPAAIEVVAKAGFDPEYGA 772
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
RP+RRA+ +ED L+E +L G IQ+GD+VT+ G
Sbjct: 773 RPIRRALQTEVEDLLSEALLQGKIQIGDTVTIGAKKG 809
>gi|206603499|gb|EDZ39979.1| Chaperone clpB [Leptospirillum sp. Group II '5-way CG']
Length = 866
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 142/266 (53%), Positives = 195/266 (73%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR GI+DPNRP+ SF F GPTGVGKTELA +LA F S +AM RIDMSEYMEKH+
Sbjct: 589 AIRRARAGIQDPNRPLGSFFFLGPTGVGKTELAKSLAVFLFDSDQAMTRIDMSEYMEKHS 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG+E GGQLTEAVR RP +VIL DEIEKAH DV N++LQ+LDDGR+TDG
Sbjct: 649 VARLIGAPPGYVGYEEGGQLTEAVRRRPFTVILLDEIEKAHPDVFNILLQVLDDGRLTDG 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVF 181
+G+ V +NT++IMTSN+G +I + L ++ ++ V E L R FRPEFLNRID++IVF
Sbjct: 709 QGRVVSFRNTVVIMTSNVGSDIIRERAGLNEEETKKMVQEVLARTFRPEFLNRIDDIIVF 768
Query: 182 RQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGR 241
L + ++ IV+I L+E+ +RL+ + +++ +T + +L GY+P +GARPLRRAI
Sbjct: 769 HPLTRHEIARIVEIQLREVNQRLKDQGVDVEMTQAAEDELTHVGYDPVFGARPLRRAIQN 828
Query: 242 LLEDNLAEIILTGYIQVGDSVTMDCD 267
+ + LA+ IL G + G + +D +
Sbjct: 829 YILNPLAQKILAGKFEKGHKILIDWN 854
>gi|147669859|ref|YP_001214677.1| ATPase [Dehalococcoides sp. BAV1]
gi|146270807|gb|ABQ17799.1| ATPase AAA-2 domain protein [Dehalococcoides sp. BAV1]
Length = 812
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 150/291 (51%), Positives = 202/291 (69%), Gaps = 16/291 (5%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G++DP RPI SFLF GPTGVGKTELA +LA+ F + AMVR+DMSEY EKHT
Sbjct: 522 AIRRSRAGLKDPRRPIGSFLFLGPTGVGKTELARSLAWFLFDDETAMVRLDMSEYQEKHT 581
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTE VR RP+ VIL DEIEKAH DV N +LQLLDDGR+TDG
Sbjct: 582 VSRLVGAPPGYVGYDEGGQLTELVRRRPYRVILLDEIEKAHPDVYNSLLQLLDDGRLTDG 641
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG--------------SDQMERGVAEELRRRF 167
+G+TVD KNT+IIMTSN G I RES LG ++M+ V E+++ F
Sbjct: 642 QGRTVDFKNTVIIMTSNAGIETIKRESALGFAVRTDDTKTRHDSYERMKDKVMTEVKKTF 701
Query: 168 RPEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYN 227
RPEF+NR+DE+IVF +L + Q+ +IVD M+K++ +RLE + ++L +T K L + GY+
Sbjct: 702 RPEFINRVDEIIVFHELAEEQIRQIVDFMIKDVSKRLEERKLKLELTDEAKGWLAKVGYD 761
Query: 228 PSYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHR 278
P++GARPLRRAI R +E LA +L + ++ T+ D + + +
Sbjct: 762 PAFGARPLRRAIERYVESPLAGKLLRN--EFSENATILVDKADEALSFSQK 810
>gi|452963184|gb|EME68265.1| ATPase with chaperone activity [Magnetospirillum sp. SO-1]
Length = 863
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 149/282 (52%), Positives = 204/282 (72%), Gaps = 1/282 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DPNRPI SFLF GPTGVGKTEL ALA F + AMVR+DMSEYMEKH+
Sbjct: 582 AVRRARAGLQDPNRPIGSFLFLGPTGVGKTELTKALAEFLFDDETAMVRMDMSEYMEKHS 641
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG+E GG LTEAVR RP+ VILFDE+EKAH DV NV+LQ+LDDGR+TDG
Sbjct: 642 VARLIGAPPGYVGYEEGGALTEAVRRRPYQVILFDEVEKAHPDVFNVLLQVLDDGRLTDG 701
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA-RESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT+I++TSN+G ++A +E S ++ V E +R FRPEFLNR+DE+++
Sbjct: 702 QGRTVDFRNTLIVLTSNLGSEILANQEEGHDSAEVRAEVMEVVRASFRPEFLNRLDEILL 761
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F +L + + IVDI LK + L + +EL++ + L E+GY+P YGARPL+R I
Sbjct: 762 FHRLGRGDMSGIVDIQLKRLRALLADRKIELSLDAGAMEWLAEKGYDPVYGARPLKRVIQ 821
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSM 282
R L++ LA +IL G ++ GD+V + GG ++ R +G +
Sbjct: 822 RALQNPLAGLILEGAVKDGDAVKVAVGEGGLLLNGRFTSGEV 863
>gi|22124822|ref|NP_668245.1| protein disaggregation chaperone [Yersinia pestis KIM10+]
gi|45440507|ref|NP_992046.1| protein disaggregation chaperone [Yersinia pestis biovar Microtus
str. 91001]
gi|21957649|gb|AAM84496.1|AE013694_1 heat shock protein [Yersinia pestis KIM10+]
gi|45435364|gb|AAS60923.1| Clp ATPase [Yersinia pestis biovar Microtus str. 91001]
Length = 864
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 147/269 (54%), Positives = 197/269 (73%), Gaps = 1/269 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F S +AMVRIDMSE+MEKH+
Sbjct: 590 AIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALATFLFDSDDAMVRIDMSEFMEKHS 649
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 650 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 709
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARE-SILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT++IMTSN+G +I + +M+ V + + FRPEF+NRIDEV+V
Sbjct: 710 QGRTVDFRNTVVIMTSNLGSDLIQEHFGQMNYSEMKTVVMDVVSHHFRPEFINRIDEVVV 769
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L + L I +I L+ +Y+RLE + E+ +T + L E G++P YGARPL+RAI
Sbjct: 770 FHPLGRAHLASIANIQLERLYKRLEERGYEVKITQPALEFLGEAGFDPVYGARPLKRAIQ 829
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
+ +E+ LA+ IL+G + G VT+D ++G
Sbjct: 830 QEIENPLAQQILSGKLIPGIPVTLDVENG 858
>gi|422420829|ref|ZP_16497782.1| negative regulator of genetic competence ClpC/MecB, partial
[Listeria seeligeri FSL S4-171]
gi|313639760|gb|EFS04509.1| negative regulator of genetic competence ClpC/MecB [Listeria
seeligeri FSL S4-171]
Length = 783
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 142/278 (51%), Positives = 201/278 (72%), Gaps = 9/278 (3%)
Query: 1 MTLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKH 60
+ + RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +++M+RIDMSEYMEK
Sbjct: 484 LAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDEDSMIRIDMSEYMEKF 543
Query: 61 TVSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTD 120
+ ++ G+PPGYVG+E GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 544 STARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEIEKAHPDVFNMLLQVLDDGRLTD 603
Query: 121 GKGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEF 171
KG+ VD +NT+IIMTSNIG + ++ +G ME V ++L++ FRPEF
Sbjct: 604 SKGRVVDFRNTVIIMTSNIGAQEMKQDKSMGFNVTDPLKDHKAMEHRVLQDLKQAFRPEF 663
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
+NRIDE IVF L + +L +IV ++ ++ +RL +++ + +T K K+ ++GY+P YG
Sbjct: 664 INRIDETIVFHSLQEKELKQIVTLLTAQLTKRLSERDIHVKLTEGAKSKIAKDGYDPEYG 723
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
ARPL+RAI + +ED L+E +L G I+VGD++ + G
Sbjct: 724 ARPLKRAIQKEVEDMLSEELLRGNIKVGDTIEIGVKDG 761
>gi|168022328|ref|XP_001763692.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685185|gb|EDQ71582.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 915
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 150/274 (54%), Positives = 197/274 (71%), Gaps = 8/274 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPN+PI+SF+F GPTGVGKTELA ALA F ++EA+VRIDMSEYMEKH
Sbjct: 601 AIQRSRAGLSDPNKPIASFMFMGPTGVGKTELAKALASYLFNTEEAIVRIDMSEYMEKHA 660
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEAVR RP++VILFDEIEKAH DV N+ LQ+LDDGRVTD
Sbjct: 661 VSRLVGAPPGYVGYEEGGQLTEAVRRRPYAVILFDEIEKAHSDVFNIFLQILDDGRVTDS 720
Query: 122 KGQTVDLKNTIIIMTSNIGDSVI--ARESILGSDQ------MERGVAEELRRRFRPEFLN 173
+G+TV NT+IIMTSN+G + + +SI G+++ M V E R FRPEF+N
Sbjct: 721 QGRTVSFTNTVIIMTSNVGSQYVLNSADSIAGNNKEVVYEAMRARVMEAARNTFRPEFMN 780
Query: 174 RIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGAR 233
RIDE IVF+QL++ Q+ IV + L + +RL K + L VT + + L GY+P+YGAR
Sbjct: 781 RIDEYIVFQQLDRDQISRIVKLQLDRVQKRLMDKKITLKVTESAVQLLASLGYDPNYGAR 840
Query: 234 PLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
P++R I + +E+ LA IL G D+V +D D
Sbjct: 841 PVKRVIQQSVENELARSILRGDFTEEDTVLVDTD 874
>gi|229015484|ref|ZP_04172482.1| Negative regulator of genetic competence [Bacillus cereus AH1273]
gi|229021693|ref|ZP_04178275.1| Negative regulator of genetic competence [Bacillus cereus AH1272]
gi|423393465|ref|ZP_17370691.1| chaperone ClpB [Bacillus cereus BAG1X1-3]
gi|228739561|gb|EEL89975.1| Negative regulator of genetic competence [Bacillus cereus AH1272]
gi|228745771|gb|EEL95775.1| Negative regulator of genetic competence [Bacillus cereus AH1273]
gi|401629572|gb|EJS47385.1| chaperone ClpB [Bacillus cereus BAG1X1-3]
Length = 811
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 146/274 (53%), Positives = 196/274 (71%), Gaps = 9/274 (3%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+RIDMSEYMEKH+ S+ GS
Sbjct: 531 GLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGS 590
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG+E GGQLTE VR +P+SV+L DE+EKAH DV N++LQ+L+DGR+TD KG+TVD
Sbjct: 591 PPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDF 650
Query: 129 KNTIIIMTSNIGDSVIARESILGSDQMERG---------VAEELRRRFRPEFLNRIDEVI 179
+NTI+IMTSN+G + R LG + + G V +EL++ FRPEFLNRIDE+I
Sbjct: 651 RNTIVIMTSNVGADALKRNKHLGFNVQDEGRDYSDMKGKVMDELKKAFRPEFLNRIDEII 710
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF L K + EIV +M+ ++ +RL+ + +EL +T + ++G++ YGARPLRRAI
Sbjct: 711 VFHMLEKKHIQEIVTLMVNQLVKRLKEQEIELHLTEGAIAAIADKGFDREYGARPLRRAI 770
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
+ +ED L+E +L G I+ G V D + VI
Sbjct: 771 QKHVEDRLSEELLKGAIEKGQKVIFDVEGESFVI 804
>gi|238756475|ref|ZP_04617782.1| Chaperone protein clpB 1 [Yersinia ruckeri ATCC 29473]
gi|238705324|gb|EEP97734.1| Chaperone protein clpB 1 [Yersinia ruckeri ATCC 29473]
Length = 857
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 151/269 (56%), Positives = 195/269 (72%), Gaps = 1/269 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F S +AMVRIDMSE+MEKH+
Sbjct: 583 AIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALATFLFDSDDAMVRIDMSEFMEKHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA-RESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT++IMTSN+G +I R +M+ V E + FRPEF+NRIDEV+V
Sbjct: 703 QGRTVDFRNTVVIMTSNLGSDLIQERFGERSYTEMKNMVMEIVGHHFRPEFINRIDEVVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L + QL I I L +Y+RLE + E+T+T + L E G++P YGARPL+RAI
Sbjct: 763 FHPLGRAQLASIAKIQLARLYKRLEERGYEVTITEPALEFLGEAGFDPVYGARPLKRAIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
+ +E+ LA+ IL+G + G VT+D G
Sbjct: 823 QEIENPLAQQILSGKLLPGIPVTLDVVDG 851
>gi|116871616|ref|YP_848397.1| ClpB ATPase [Listeria welshimeri serovar 6b str. SLCC5334]
gi|116740494|emb|CAK19614.1| ClpB ATPase [Listeria welshimeri serovar 6b str. SLCC5334]
Length = 820
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 143/278 (51%), Positives = 201/278 (72%), Gaps = 9/278 (3%)
Query: 1 MTLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKH 60
+ + RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +++M+RIDMSEYMEK
Sbjct: 521 LAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDEDSMIRIDMSEYMEKF 580
Query: 61 TVSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTD 120
+ ++ G+PPGYVG+E GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 581 STARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEIEKAHPDVFNMLLQVLDDGRLTD 640
Query: 121 GKGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEF 171
KG+ VD +NT+IIMTSNIG + ++ +G ME V ++L++ FRPEF
Sbjct: 641 SKGRVVDFRNTVIIMTSNIGAQEMKQDKSMGFNVIDPLKDHKAMEHRVLQDLKQAFRPEF 700
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
+NRIDE IVF L + +L +IV ++ ++ +RL +++ + +T K K+ ++GY+P YG
Sbjct: 701 INRIDETIVFHSLQEKELKQIVTLLTSQLTKRLAERDIHVKLTEGAKAKIAKDGYDPEYG 760
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
ARPL+RAI + +ED L+E +L G I+VGD+V + G
Sbjct: 761 ARPLKRAIQKEVEDMLSEELLRGNIKVGDNVEIGVKEG 798
>gi|420602242|ref|ZP_15094525.1| AAA domain family protein [Yersinia pestis PY-11]
gi|391472129|gb|EIR29624.1| AAA domain family protein [Yersinia pestis PY-11]
Length = 415
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 147/269 (54%), Positives = 197/269 (73%), Gaps = 1/269 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F S +AMVRIDMSE+MEKH+
Sbjct: 141 AIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALATFLFDSDDAMVRIDMSEFMEKHS 200
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 201 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 260
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARE-SILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT++IMTSN+G +I + +M+ V + + FRPEF+NRIDEV+V
Sbjct: 261 QGRTVDFRNTVVIMTSNLGSDLIQEHFGQMNYSEMKTVVMDVVSHHFRPEFINRIDEVVV 320
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L + L I +I L+ +Y+RLE + E+ +T + L E G++P YGARPL+RAI
Sbjct: 321 FHPLGRAHLASIANIQLERLYKRLEERGYEVKITQPALEFLGEAGFDPVYGARPLKRAIQ 380
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
+ +E+ LA+ IL+G + G VT+D ++G
Sbjct: 381 QEIENPLAQQILSGKLIPGIPVTLDVENG 409
>gi|383807762|ref|ZP_09963321.1| ATP-dependent protease, ATPase subunit [Candidatus Aquiluna sp.
IMCC13023]
gi|383298505|gb|EIC91121.1| ATP-dependent protease, ATPase subunit [Candidatus Aquiluna sp.
IMCC13023]
Length = 825
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 147/277 (53%), Positives = 204/277 (73%), Gaps = 9/277 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
T+ R R G++DP RP SF+F GPTGVGKTELA ALA F ++A++ +DMSEY EKHT
Sbjct: 532 TIRRQRAGLKDPKRPSGSFIFAGPTGVGKTELAKALAEFLFEDEDALIALDMSEYSEKHT 591
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ FG+PPG+VG+E GGQLTE +R +P SV+LFDEIEKAH D+ N +LQ+L++GR+TDG
Sbjct: 592 VSRLFGAPPGFVGYEEGGQLTEKIRRKPFSVVLFDEIEKAHPDIFNSLLQILEEGRLTDG 651
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESI---LGSD------QMERGVAEELRRRFRPEFL 172
+G+ VD KNTIIIMT+N+G I ++ L D QM+ V EEL++ F+PEFL
Sbjct: 652 QGRVVDFKNTIIIMTTNLGTREITGSTLGFSLEGDSQNDYTQMKGKVNEELKKNFKPEFL 711
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NR+D+VIVF QL++ +L++IVD+ + + RL+ +++ LT+T + K +LIE GY+P+ GA
Sbjct: 712 NRVDDVIVFPQLSREELLQIVDLFISRLQLRLDDRDLMLTLTSSAKDRLIELGYDPTMGA 771
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
RPLRRA+ R +ED ++E ILTGYI + +D G
Sbjct: 772 RPLRRAVQREIEDAISERILTGYIGTSQDILVDYLEG 808
>gi|222100174|ref|YP_002534742.1| ATP-dependent Clp protease, ATPase subunit [Thermotoga neapolitana
DSM 4359]
gi|221572564|gb|ACM23376.1| ATP-dependent Clp protease, ATPase subunit [Thermotoga neapolitana
DSM 4359]
Length = 790
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 154/270 (57%), Positives = 198/270 (73%), Gaps = 6/270 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
T+ RARVGI++P RPI FLF GPTGVGKTELA LA FGS++AM+R+DMSEYMEKH+
Sbjct: 520 TIRRARVGIKNPRRPIGVFLFLGPTGVGKTELARTLADVLFGSEDAMIRLDMSEYMEKHS 579
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG+E GGQLTEAVR RP+SVIL DEIEKAH DV N++LQ+ +DGR+TDG
Sbjct: 580 VARLIGAPPGYVGYEEGGQLTEAVRRRPYSVILLDEIEKAHPDVFNILLQVFEDGRLTDG 639
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMER-GVAEELRRRFRPEFLNRIDEVIV 180
KG TVD +NTIIIMTSNIG E IL S + R + +E+R F+PEFLNRID ++
Sbjct: 640 KGNTVDFRNTIIIMTSNIGS-----EKILESQENVRLEIEKEIRNVFKPEFLNRIDAIVY 694
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F+ L ++ +IV+IM+K++ + L+ K + L +T K+ L E GY PS GARPLRR I
Sbjct: 695 FKPLTMDEVKKIVEIMVKQLEDILKDKRITLELTERAKEYLAEAGYVPSLGARPLRRIIE 754
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSGG 270
LE +A+ IL G I+ GD + +D D G
Sbjct: 755 LELESMIADKILEGEIKEGDHIVVDADEYG 784
>gi|50955646|ref|YP_062934.1| ATP-dependent Clp protease, ATP-binding subunit [Leifsonia xyli
subsp. xyli str. CTCB07]
gi|50952128|gb|AAT89829.1| ATP-dependent Clp protease, ATP-binding subunit [Leifsonia xyli
subsp. xyli str. CTCB07]
Length = 839
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 147/277 (53%), Positives = 201/277 (72%), Gaps = 9/277 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
T+ R R G++DP RP SF+F GPTGVGKTELA ALA F + AM+ +DMSEY EKHT
Sbjct: 528 TIRRTRAGLKDPKRPSGSFIFAGPTGVGKTELAKALAEFLFDDETAMISLDMSEYGEKHT 587
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ FG+PPG+VGFE+GGQLTE VR +P SV+LFDEIEKAH D+ N +LQ+L++GR+TDG
Sbjct: 588 VSRLFGAPPGFVGFEDGGQLTEKVRRKPFSVVLFDEIEKAHPDIFNSLLQILEEGRLTDG 647
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESI---------LGSDQMERGVAEELRRRFRPEFL 172
+G+ VD KNT+IIMT+N+G I+ + G D+M V EEL++ F+PEFL
Sbjct: 648 QGRVVDFKNTVIIMTTNLGTKDISGAPVGFQIEGDPTTGYDRMRGKVYEELKKNFKPEFL 707
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NR+DE+IVF QL+K +L++IVD+ +K + +RL ++M + + K++LIE G++P+ GA
Sbjct: 708 NRVDEIIVFPQLSKPELLQIVDLFIKRLSDRLLDRDMTIELEIAAKERLIEVGFDPTLGA 767
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
RPLRRA+ +ED L+E IL G + GD V +D G
Sbjct: 768 RPLRRAVQHEIEDRLSEKILHGELSAGDHVHVDFVDG 804
>gi|325289939|ref|YP_004266120.1| ATP-dependent chaperone ClpB [Syntrophobotulus glycolicus DSM 8271]
gi|324965340|gb|ADY56119.1| ATP-dependent chaperone ClpB [Syntrophobotulus glycolicus DSM 8271]
Length = 863
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 146/268 (54%), Positives = 197/268 (73%), Gaps = 4/268 (1%)
Query: 3 LERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTV 62
+ RAR G+ DPNRP+ SFLF GPTGVGKTELA ALA F ++A++RIDMSEYMEKH V
Sbjct: 587 IRRARTGLHDPNRPLGSFLFLGPTGVGKTELAKALAEFLFDDEQALIRIDMSEYMEKHAV 646
Query: 63 SKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGK 122
S+ G+PPGYVG+E GGQLTEAVR +P+SVIL DEIEKAH +V N++LQLLDDGR+TDG+
Sbjct: 647 SRLVGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHHEVFNILLQLLDDGRLTDGQ 706
Query: 123 GQTVDLKNTIIIMTSNIGDSVIARE---SILGSDQMERGVAEELRRRFRPEFLNRIDEVI 179
G+ V+ KN++IIMTSNI S I RE SI ++ V EL + FRPEF+NR+DE+I
Sbjct: 707 GRVVNFKNSVIIMTSNIASSAI-RELGGSIKDPQRLRSTVNTELSKYFRPEFINRVDEII 765
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
+F +K + +I+DI L+++ RL + + L ++ + +LIEEGY+P YGARPL+RAI
Sbjct: 766 IFDPHDKESISQIIDIQLEKLKARLRERGINLELSDKARDRLIEEGYDPVYGARPLKRAI 825
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCD 267
+ +++ +A I+L G G + +D D
Sbjct: 826 QQRIQNRIAMILLEGNTLAGAKILVDVD 853
>gi|400975586|ref|ZP_10802817.1| ATP-dependent Clp protease, ATP-binding subunit [Salinibacterium
sp. PAMC 21357]
Length = 825
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 145/273 (53%), Positives = 199/273 (72%), Gaps = 9/273 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
T+ R R G++DPNRP SF+F GPTGVGKTELA ALA F + A++ +DMSEY EKHT
Sbjct: 527 TIRRTRAGLKDPNRPSGSFIFAGPTGVGKTELAKALAEFLFDDENALISLDMSEYGEKHT 586
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ FG+PPG+VGFE GGQLTE VR +P SV+LFDEIEKAH D+ N +LQ+L++GR+TDG
Sbjct: 587 VSRLFGAPPGFVGFEEGGQLTEKVRRKPFSVVLFDEIEKAHPDIFNSLLQILEEGRLTDG 646
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR---------ESILGSDQMERGVAEELRRRFRPEFL 172
+G+ +D KNT+IIMT+N+G I +S D+M V EEL++ F+PEFL
Sbjct: 647 QGRVIDFKNTVIIMTTNLGTKDITAGPMGFQVEGDSATSYDRMRGKVVEELKKHFKPEFL 706
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NR+DE IVF QLNK +L++IVD+ +K + ER+ +++ + +T K++LI+ G++P+ GA
Sbjct: 707 NRVDETIVFPQLNKPELLQIVDLFIKRLSERMMDRDLTVEITVPAKERLIDVGFDPALGA 766
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMD 265
RPLRRA+ +ED L+E IL G + GD V +D
Sbjct: 767 RPLRRAVQHEVEDALSEKILHGELNAGDHVHVD 799
>gi|390442448|ref|ZP_10230443.1| Chaperone [Microcystis sp. T1-4]
gi|389834227|emb|CCI34569.1| Chaperone [Microcystis sp. T1-4]
Length = 872
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 149/269 (55%), Positives = 191/269 (71%), Gaps = 6/269 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DP+RP +SF+F GPTGVGKTELA ALA F ++EA+VRIDMSEYMEKH+
Sbjct: 589 AIQRSRAGLSDPHRPTASFIFLGPTGVGKTELAKALARNLFDTEEALVRIDMSEYMEKHS 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTEA+R RP+SVILFDEIEKAH DV NVMLQ+LDDGR+TD
Sbjct: 649 VSRLMGAPPGYVGYDEGGQLTEAIRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRLTDS 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS----DQMERGVAEELRRRFRPEFLNRIDE 177
+G VD KNTIIIMTSNIG I + G ++M+ V E +R FRPEFLNRIDE
Sbjct: 709 QGHLVDFKNTIIIMTSNIGSQYIL--DVAGDESRYEEMQARVMEAMRNSFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
I+F L K QL IV + + + +RL + + L L E GY+P YGARPL+R
Sbjct: 767 TIIFHSLQKAQLRSIVKLQIGNLSDRLMEQKLALKFADIALDYLAEIGYDPVYGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
A+ R +E +A+ IL G + GD++ +D
Sbjct: 827 AVQRYVETPIAKAILRGEFKAGDTIFVDV 855
>gi|402572994|ref|YP_006622337.1| ATP-dependent chaperone ClpB [Desulfosporosinus meridiei DSM 13257]
gi|402254191|gb|AFQ44466.1| ATP-dependent chaperone ClpB [Desulfosporosinus meridiei DSM 13257]
Length = 864
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 147/269 (54%), Positives = 197/269 (73%), Gaps = 2/269 (0%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DPNRP+ SFLF GPTGVGKTEL+ ALA F ++AMVRIDMSEYMEKHTVS+
Sbjct: 589 RARAGLQDPNRPLGSFLFLGPTGVGKTELSRALAEFLFDDEQAMVRIDMSEYMEKHTVSR 648
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E GGQLTEAVR +P+SVILFDE+EKAH DV NV+LQLLDDGR+TDG+G+
Sbjct: 649 LIGAPPGYVGYEEGGQLTEAVRRKPYSVILFDEVEKAHTDVSNVLLQLLDDGRLTDGQGR 708
Query: 125 TVDLKNTIIIMTSNIGDSVIAR--ESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVFR 182
V+ KNT++I+TSNI I + +++ + ELR FRPEFLNR+DE+IVF
Sbjct: 709 IVNFKNTVVILTSNIASPSIQELTQRNASKEEVRNTINGELRHYFRPEFLNRLDEIIVFH 768
Query: 183 QLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGRL 242
L + + +IV+I L ++++RL + + L ++ K++L EGY+P YGARPL+R I +
Sbjct: 769 PLGREHIGQIVNIQLNQLHKRLSERKLTLELSLKAKEQLTNEGYDPVYGARPLKRVILQR 828
Query: 243 LEDNLAEIILTGYIQVGDSVTMDCDSGGN 271
L++ LA +L G + G + +D D GN
Sbjct: 829 LQNPLALKLLQGEFKEGQRILVDIDDFGN 857
>gi|347547703|ref|YP_004854031.1| putative endopeptidase Clp ATP-binding chain C [Listeria ivanovii
subsp. ivanovii PAM 55]
gi|346980774|emb|CBW84681.1| Putative endopeptidase Clp ATP-binding chain C [Listeria ivanovii
subsp. ivanovii PAM 55]
Length = 820
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 142/278 (51%), Positives = 201/278 (72%), Gaps = 9/278 (3%)
Query: 1 MTLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKH 60
+ + RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +++M+RIDMSEYMEK
Sbjct: 521 LAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDEDSMIRIDMSEYMEKF 580
Query: 61 TVSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTD 120
+ ++ G+PPGYVG+E GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 581 STARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEIEKAHPDVFNMLLQVLDDGRLTD 640
Query: 121 GKGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEF 171
KG+ VD +NT+IIMTSNIG + ++ +G ME V ++L++ FRPEF
Sbjct: 641 SKGRVVDFRNTVIIMTSNIGAQEMKQDKSMGFNVIDPLKDHKAMEHRVLQDLKQAFRPEF 700
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
+NRIDE IVF L + +L +IV ++ ++ +RL +++ + +T K K+ ++GY+P YG
Sbjct: 701 INRIDETIVFHSLQEKELKQIVTLLTAQLTKRLAERDIHVKLTEGAKAKIAKDGYDPEYG 760
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
ARPL+RAI + +ED L+E +L G I+VGD++ + G
Sbjct: 761 ARPLKRAIQKEVEDMLSEELLRGNIKVGDTIEIGVKDG 798
>gi|218290044|ref|ZP_03494211.1| ATPase AAA-2 domain protein [Alicyclobacillus acidocaldarius LAA1]
gi|218239878|gb|EED07066.1| ATPase AAA-2 domain protein [Alicyclobacillus acidocaldarius LAA1]
Length = 812
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 147/270 (54%), Positives = 197/270 (72%), Gaps = 7/270 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++A++RIDMSEYME+H+
Sbjct: 522 AIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEALFGDEDALIRIDMSEYMERHS 581
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG+E GGQLTE VR +P+SV+L DEIEKAH +V N++LQ+LDDGR+TDG
Sbjct: 582 TSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLDDGRLTDG 641
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQ-------MERGVAEELRRRFRPEFLNR 174
KG+TVD +NT+IIMTSN+G + + LG + M+ V +EL+R FRPEFLNR
Sbjct: 642 KGRTVDFRNTVIIMTSNVGAEELRKGGALGFKREEDKYLGMKDKVMDELKRTFRPEFLNR 701
Query: 175 IDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARP 234
IDE+IVF L++ + IVD M+ + RL+ + +E +T KK L + G++P YGARP
Sbjct: 702 IDEIIVFHPLDETHIERIVDKMVDNLKRRLKEQEIEFELTDEAKKFLAKVGFDPQYGARP 761
Query: 235 LRRAIGRLLEDNLAEIILTGYIQVGDSVTM 264
L+RAI R +ED L+ ++ G I+ GD V +
Sbjct: 762 LQRAIVRNVEDLLSSALIAGEIKKGDRVLL 791
>gi|392377944|ref|YP_004985103.1| chaperone [Azospirillum brasilense Sp245]
gi|356879425|emb|CCD00337.1| chaperone [Azospirillum brasilense Sp245]
Length = 874
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 152/291 (52%), Positives = 206/291 (70%), Gaps = 8/291 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DPNRP+ SFLF GPTGVGKTEL ALA F + AMVRIDMSE+MEKH+
Sbjct: 583 AVRRARAGLQDPNRPMGSFLFLGPTGVGKTELTKALAEFLFDDEHAMVRIDMSEFMEKHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG+E GG LTEAVR RP+ VILFDE+EKAH DV NV+LQ+LDDGR+TDG
Sbjct: 643 VARLIGAPPGYVGYEEGGSLTEAVRRRPYQVILFDEVEKAHPDVFNVLLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQ----MERGVAEELRRRFRPEFLNRIDE 177
+G+TVD +NT+I+MTSN+G +A LG DQ + V E +R FRPEFLNR+DE
Sbjct: 703 QGRTVDFRNTLIVMTSNLGSEYLA---TLGEDQDVDTVRAEVMEAVRAAFRPEFLNRLDE 759
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+++FR+L++ + IVDI + + L+ + + L V K+ L + GY+P YGARPL+R
Sbjct: 760 ILIFRRLSREDMSGIVDIQFRRLQRLLDDRKLVLEVDDAAKRWLADAGYDPVYGARPLKR 819
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM-YRHRNGSMTVCAR 287
I R L++ LAE+IL G ++ GD+V + G +I +H +G+ +R
Sbjct: 820 VIQRELQNPLAEMILRGKVRDGDTVRVTATELGLLIEPPQHGDGATEQPSR 870
>gi|146297365|ref|YP_001181136.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145410941|gb|ABP67945.1| ATPase AAA-2 domain protein [Caldicellulosiruptor saccharolyticus
DSM 8903]
Length = 830
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 148/291 (50%), Positives = 202/291 (69%), Gaps = 11/291 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R RVG++DP RPI SF+F GPTGVGKTEL ALA FG+++A++RIDMSEYMEK
Sbjct: 530 AIRRGRVGLKDPKRPIGSFIFLGPTGVGKTELCRALAEALFGTEDALIRIDMSEYMEKFN 589
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+E GGQLTE VR RP+SV+LFDEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 590 VSKLIGSPPGYVGYEEGGQLTEKVRRRPYSVVLFDEIEKAHPDVFNLLLQILDDGRLTDS 649
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG-----------SDQMERGVAEELRRRFRPE 170
+G+TV +NT+IIMTSNIG +I LG +Q++ V EL++ FRPE
Sbjct: 650 QGRTVSFRNTVIIMTSNIGAQLITNPKKLGFSTSEDEKQRTYEQIKESVMGELKKTFRPE 709
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNRIDE+IVF L++ + +IV+I+L + ER+++ T + + ++G++P +
Sbjct: 710 FLNRIDEIIVFHPLDEEDVKKIVEILLNNLKERIKSSEYYAEFTPALVEAIAKKGFDPLF 769
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGS 281
GARPL+RAI ++ED ++E IL G I+ GD +D VI + ++ S
Sbjct: 770 GARPLKRAIQTMVEDKISEAILEGQIKQGDKFIVDYVDDKTVITKKEKSSS 820
>gi|157363652|ref|YP_001470419.1| ATPase [Thermotoga lettingae TMO]
gi|157314256|gb|ABV33355.1| ATPase AAA-2 domain protein [Thermotoga lettingae TMO]
Length = 815
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 151/284 (53%), Positives = 204/284 (71%), Gaps = 13/284 (4%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI FLF GPTGVGKTEL L FG ++A++R DMSEYME+ +VS+ G+
Sbjct: 529 GLKDPRRPIGVFLFLGPTGVGKTELTKVLTAHLFGDEKALLRFDMSEYMERFSVSRLIGA 588
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG+E GG LTE VR RP SVILFDEIEKAH DV N++LQ++DDGR+TD +G+ VD
Sbjct: 589 PPGYVGYEEGGTLTERVRRRPFSVILFDEIEKAHPDVFNILLQIMDDGRLTDSQGREVDF 648
Query: 129 KNTIIIMTSNIGDSVI----------ARESILGSDQMERGVAEELRRRFRPEFLNRIDEV 178
KNTI++MTSNIG ++I ++++ +M+ V EE+++ FRPEFLNRIDEV
Sbjct: 649 KNTIVVMTSNIGGNLINKSKKTMGFVSQDADKDYQEMKSLVLEEVKKTFRPEFLNRIDEV 708
Query: 179 IVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRA 238
IVF LN+ + +IVDI++ ++++RLE+K M L +T K LIE+GY+P +GARPLRRA
Sbjct: 709 IVFHPLNRDHIEKIVDILVSDVHKRLESKGMTLKLTKEAKNFLIEKGYDPVFGARPLRRA 768
Query: 239 IGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMY-RHRNGS 281
I + LED LAE +L G GD+V C GN + + +HR+ +
Sbjct: 769 IQQYLEDPLAEELLRGKFAFGDTVV--CKVSGNGLKFTKHRSKA 810
>gi|428769477|ref|YP_007161267.1| ATP-dependent chaperone ClpB [Cyanobacterium aponinum PCC 10605]
gi|428683756|gb|AFZ53223.1| ATP-dependent chaperone ClpB [Cyanobacterium aponinum PCC 10605]
Length = 873
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 152/270 (56%), Positives = 196/270 (72%), Gaps = 6/270 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRP +SF+F GPTGVGKTELA ALA F ++EA+VRIDMSEYMEKHT
Sbjct: 589 AIQRSRAGLSDPNRPTASFIFLGPTGVGKTELAKALAGILFDTEEAIVRIDMSEYMEKHT 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEA+R RP+SV+LFDEIEKAH DV NVMLQ+LDDGR+TD
Sbjct: 649 VSRLMGAPPGYVGYEEGGQLTEAIRRRPYSVVLFDEIEKAHPDVFNVMLQILDDGRLTDS 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD----QMERGVAEELRRRFRPEFLNRIDE 177
+G+TVD NTIIIMTSNIG I + G D QM V + +R FRPEFLNRIDE
Sbjct: 709 QGRTVDFSNTIIIMTSNIGSQFIL--DVSGDDSKYEQMRSRVMDAMRANFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+F L K QL IV + + + RL + + L+++ + L E GY+P YGARPL+R
Sbjct: 767 IIIFHSLEKSQLRHIVKLQVARLETRLAEQKLSLSLSESALDFLAEIGYDPVYGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
A+ + LE +A+ IL G + GD++ +D +
Sbjct: 827 AVQKYLETAIAKSILKGEFKDGDTIFVDVE 856
>gi|73749097|ref|YP_308336.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Dehalococcoides sp. CBDB1]
gi|289433073|ref|YP_003462946.1| ATPase AAA [Dehalococcoides sp. GT]
gi|452204078|ref|YP_007484211.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Dehalococcoides mccartyi DCMB5]
gi|73660813|emb|CAI83420.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Dehalococcoides sp. CBDB1]
gi|288946793|gb|ADC74490.1| ATPase AAA-2 domain protein [Dehalococcoides sp. GT]
gi|452111137|gb|AGG06869.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Dehalococcoides mccartyi DCMB5]
Length = 812
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 150/291 (51%), Positives = 202/291 (69%), Gaps = 16/291 (5%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G++DP RPI SFLF GPTGVGKTELA +LA+ F + AMVR+DMSEY EKHT
Sbjct: 522 AIRRSRAGLKDPRRPIGSFLFLGPTGVGKTELARSLAWFLFDDETAMVRLDMSEYQEKHT 581
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTE VR RP+ VIL DEIEKAH DV N +LQLLDDGR+TDG
Sbjct: 582 VSRLVGAPPGYVGYDEGGQLTELVRRRPYRVILLDEIEKAHPDVYNSLLQLLDDGRLTDG 641
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG--------------SDQMERGVAEELRRRF 167
+G+TVD KNT+IIMTSN G I RES LG ++M+ V E+++ F
Sbjct: 642 QGRTVDFKNTVIIMTSNAGIETIKRESALGFAVRTDDTKTRHDSYERMKDKVMTEVKKTF 701
Query: 168 RPEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYN 227
RPEF+NR+DE+IVF +L + Q+ +IVD M+K++ +RLE + ++L +T K L + GY+
Sbjct: 702 RPEFINRVDEIIVFHELAEEQIRQIVDFMIKDVSKRLEERKLKLELTDEAKGWLAKVGYD 761
Query: 228 PSYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHR 278
P++GARPLRRAI R +E LA +L + ++ T+ D + + +
Sbjct: 762 PAFGARPLRRAIERYVESPLAGKLLRN--EFSENATILVDKADEALSFSQK 810
>gi|422302916|ref|ZP_16390274.1| Chaperone [Microcystis aeruginosa PCC 9806]
gi|389792189|emb|CCI12069.1| Chaperone [Microcystis aeruginosa PCC 9806]
Length = 872
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 150/269 (55%), Positives = 191/269 (71%), Gaps = 6/269 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRP +SF+F GPTGVGKTELA ALA F ++EA+VRIDMSEYMEKH+
Sbjct: 589 AIQRSRAGLSDPNRPTASFIFLGPTGVGKTELAKALARNLFDTEEALVRIDMSEYMEKHS 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTEA+R RP+SVILFDEIEKAH DV NVMLQ+LDDGR+TD
Sbjct: 649 VSRLMGAPPGYVGYDEGGQLTEAIRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRLTDS 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS----DQMERGVAEELRRRFRPEFLNRIDE 177
+G VD KNTIIIMTSNIG I + G ++M+ V E +R FRPEFLNRIDE
Sbjct: 709 QGHLVDFKNTIIIMTSNIGSQYIL--DVAGDESRYEEMQARVMEAMRNSFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
I+F L K QL IV + + + +RL + + L L E GY+P YGARPL+R
Sbjct: 767 TIIFHSLQKAQLRSIVKLQIGNLSDRLIEQKLALKFADIALDYLAEIGYDPVYGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
A+ R +E +A+ IL G + GD++ +D
Sbjct: 827 AVQRYVETPIAKAILRGEFKGGDTIFVDV 855
>gi|431792439|ref|YP_007219344.1| chaperone ATPase [Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430782665|gb|AGA67948.1| ATPase with chaperone activity, ATP-binding subunit
[Desulfitobacterium dichloroeliminans LMG P-21439]
Length = 827
Score = 304 bits (779), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 142/275 (51%), Positives = 203/275 (73%), Gaps = 9/275 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RP+ SF+F GPTGVGKTELA ALA FG ++A+VRIDMSEYMEKH
Sbjct: 531 AVRRARAGLKDPKRPVGSFIFLGPTGVGKTELARALAEALFGEEDALVRIDMSEYMEKHA 590
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGY+G + GGQLTEA+R +P+SVIL DEIEKAH +V N++LQ+L+DGR+TD
Sbjct: 591 VSRLVGAPPGYIGHDEGGQLTEAIRRKPYSVILLDEIEKAHPEVFNILLQVLEDGRLTDT 650
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQ---------MERGVAEELRRRFRPEFL 172
KG+TVD +N +IIMTSN+G S++ +E++ +++ M V E+L++ FRPEFL
Sbjct: 651 KGRTVDFRNAVIIMTSNVGASMMKKEAMGFANRRDETTEYKNMSARVMEDLKKTFRPEFL 710
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NR+DE +VF L L++I +I++K++ RL+ ++ +L V + + + +EG +P+YGA
Sbjct: 711 NRVDETVVFHSLQSEGLLKITEILMKQVSTRLKEQDYDLQVEKSALELIAKEGNDPTYGA 770
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RPLRRAI RL+ED L+E IL G + GD + + +
Sbjct: 771 RPLRRAIQRLIEDGLSEKILLGEFKPGDKIKVTAE 805
>gi|72381856|ref|YP_291211.1| ATPase [Prochlorococcus marinus str. NATL2A]
gi|72001706|gb|AAZ57508.1| ATPase [Prochlorococcus marinus str. NATL2A]
Length = 863
Score = 304 bits (779), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 142/266 (53%), Positives = 197/266 (74%), Gaps = 2/266 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DP+RPI+SFLF GPTGVGKTEL+ ALA + F S+ +++RIDMSEYMEKH+
Sbjct: 589 AIQRSRTGLSDPSRPIASFLFLGPTGVGKTELSKALASQLFDSENSLIRIDMSEYMEKHS 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEA+R +P+ V+LFDEIEKAH+DV NV+LQ+LD+GRVTDG
Sbjct: 649 VSRLIGAPPGYVGYEAGGQLTEAIRRKPYCVLLFDEIEKAHKDVFNVLLQILDEGRVTDG 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS--DQMERGVAEELRRRFRPEFLNRIDEVI 179
+G+T + KNTIII+TSN+G +I+ + ++ + +EL+ FRPEFLNR+DE+I
Sbjct: 709 QGRTTNFKNTIIILTSNLGSELISENDVTNDPLTNIDELINQELKSNFRPEFLNRLDEII 768
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
F L K L+++VD+ L + ERL AK +EL + + E GYNPSYGARPL+R I
Sbjct: 769 NFEPLKKETLLKVVDLQLNRLRERLGAKGIELKIDDDVLFFITELGYNPSYGARPLKRVI 828
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMD 265
+ LE +A IL G + G ++ ++
Sbjct: 829 QKELESEIARYILKGKYKEGCTIKIE 854
>gi|365898598|ref|ZP_09436548.1| Chaperone [Bradyrhizobium sp. STM 3843]
gi|365420664|emb|CCE09090.1| Chaperone [Bradyrhizobium sp. STM 3843]
Length = 879
Score = 304 bits (779), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 148/276 (53%), Positives = 199/276 (72%), Gaps = 5/276 (1%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G++DPNRPI SF+F GPTGVGKTEL ALA F + AMVR+DMSEYMEKH+
Sbjct: 584 AVRRSRAGLQDPNRPIGSFMFLGPTGVGKTELTKALAEYLFNDETAMVRLDMSEYMEKHS 643
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GG LTEAVR RP+ V+LFDEIEKAH DV NV+LQ+LDDGR+TDG
Sbjct: 644 VSRLIGAPPGYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDG 703
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQME--RGVAEELRRRFRPEFLNRIDEVI 179
+G+TVD +NT+IIMTSN+G + + G D E V +R FRPEFLNR+DE+I
Sbjct: 704 QGRTVDFRNTLIIMTSNLGSEFLVNQP-EGEDTSEVRDQVMATVRAHFRPEFLNRVDEII 762
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
+F +L K ++ IV+I + + LE + +EL++ + L +G++P+YGARPL+R I
Sbjct: 763 LFHRLQKSEMGRIVEIQFARLQKLLEERKIELSLDGAARDWLAVKGWDPAYGARPLKRVI 822
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMY 275
R L+D LAE+IL G I+ GD V + + GNV+ +
Sbjct: 823 QRHLQDPLAEMILAGEIKDGDKVAISSE--GNVLTF 856
>gi|384177987|ref|YP_005563749.1| negative regulator of genetic competence clpC/mecB [Bacillus
thuringiensis serovar finitimus YBT-020]
gi|324324071|gb|ADY19331.1| negative regulator of genetic competence clpC/mecB [Bacillus
thuringiensis serovar finitimus YBT-020]
Length = 811
Score = 304 bits (779), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 146/274 (53%), Positives = 195/274 (71%), Gaps = 9/274 (3%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+RIDMSEYMEKH+ S+ GS
Sbjct: 531 GLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGS 590
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG+E GGQLTE VR +P+SV+L DE+EKAH DV N++LQ+L+DGR+TD KG+TVD
Sbjct: 591 PPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDF 650
Query: 129 KNTIIIMTSNIGDSVIARESILGSDQMERG---------VAEELRRRFRPEFLNRIDEVI 179
+NTI+IMTSN+G + R LG + + G V +EL++ FRPEFLNRIDE+I
Sbjct: 651 RNTIVIMTSNVGAEALKRNKHLGFNVQDEGRDYSDMKGKVMDELKKAFRPEFLNRIDEII 710
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF L K + EIV +M+ ++ RL+ + +EL +T + ++G++ YGARPLRRAI
Sbjct: 711 VFHMLEKKHIQEIVTLMVNQLVNRLKEQEIELQLTEGAISAIADKGFDREYGARPLRRAI 770
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
+ +ED L+E +L G I+ G V D + VI
Sbjct: 771 QKHVEDRLSEELLKGAIEKGQKVIFDVEGESFVI 804
>gi|261409551|ref|YP_003245792.1| ATPase AAA-2 domain-containing protein [Paenibacillus sp. Y412MC10]
gi|261286014|gb|ACX67985.1| ATPase AAA-2 domain protein [Paenibacillus sp. Y412MC10]
Length = 818
Score = 304 bits (779), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 147/279 (52%), Positives = 200/279 (71%), Gaps = 10/279 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RP+ SF+F GPTGVGKTELA ALA FG + A+VRIDMSEYMEKH+ S+
Sbjct: 526 RARAGLKDPKRPMGSFIFLGPTGVGKTELARALAEAMFGDENAVVRIDMSEYMEKHSTSR 585
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E GGQLTE VR +P+SV+L DEIEKAH +V N++LQ+L+DGR+TD KG+
Sbjct: 586 LVGAPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGR 645
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEFLNR 174
VD +NT+II+TSN+G I + S LG + M+ V +EL++ FRPEFLNR
Sbjct: 646 VVDFRNTLIILTSNVGAEAIKKNSTLGFTAVTDAGRDYNNMKGKVMDELKKSFRPEFLNR 705
Query: 175 IDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARP 234
IDE+IVF L + + EIV +M E+ +RL+ + +T K + +EGY+P++GARP
Sbjct: 706 IDEIIVFHSLEEKHIAEIVTLMSDELRKRLKEFEVHFELTDKAKAFIAKEGYDPAFGARP 765
Query: 235 LRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
LRRAI + +ED L+E +L G + GDS+ +D +G V+
Sbjct: 766 LRRAIQKHIEDRLSEELLKGNVTKGDSLVIDEANGELVV 804
>gi|307154709|ref|YP_003890093.1| ATP-dependent chaperone ClpB [Cyanothece sp. PCC 7822]
gi|306984937|gb|ADN16818.1| ATP-dependent chaperone ClpB [Cyanothece sp. PCC 7822]
Length = 924
Score = 304 bits (779), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 149/260 (57%), Positives = 191/260 (73%), Gaps = 2/260 (0%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP+RPI SFLF GPTGVGKTELA ALA F S+EAMVRIDMSEYMEKH VS+ G+
Sbjct: 604 GMKDPSRPIGSFLFMGPTGVGKTELARALAQFLFDSEEAMVRIDMSEYMEKHAVSRLIGA 663
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG+E GGQL+EAVR RP+SV+L DE+EKAHRDV N++LQ+LDDGR+TD +G+ VD
Sbjct: 664 PPGYVGYEEGGQLSEAVRRRPYSVVLLDEVEKAHRDVFNILLQVLDDGRITDSQGRVVDF 723
Query: 129 KNTIIIMTSNIGDSVIARESILGSD--QMERGVAEELRRRFRPEFLNRIDEVIVFRQLNK 186
+NTII+MTSNIG I S +D +M + V LR+ FRPEFLNRID++I+F L K
Sbjct: 724 RNTIIVMTSNIGSEHILNVSANDTDYEEMRKRVLVALRKHFRPEFLNRIDDLIIFHTLKK 783
Query: 187 MQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGRLLEDN 246
+L IV + L+ I L + + L +T+ + ++ GY+P+YGARPL+RAI R LE+
Sbjct: 784 DELRHIVRLQLQRIQRLLSEQKISLDLTNAAQDYIVNVGYDPTYGARPLKRAIQRELENP 843
Query: 247 LAEIILTGYIQVGDSVTMDC 266
LA IL GD+V +DC
Sbjct: 844 LAMKILEQSFIEGDTVVIDC 863
>gi|406982444|gb|EKE03762.1| hypothetical protein ACD_20C00155G0001 [uncultured bacterium]
Length = 872
Score = 304 bits (779), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 147/271 (54%), Positives = 197/271 (72%), Gaps = 6/271 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP+RP+ SF+F GPTGVGKTELA +LA F ++AM+RIDM+EYMEKH+
Sbjct: 591 AIRRARAGLKDPDRPVGSFIFLGPTGVGKTELARSLAEFLFNDQDAMIRIDMTEYMEKHS 650
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG+E GGQLTE VR +P+SVILFDEIEKAH DV N+MLQ+LDDGR+TD
Sbjct: 651 VARLIGAPPGYVGYEEGGQLTEQVRRKPYSVILFDEIEKAHPDVFNLMLQILDDGRLTDS 710
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR---ESILGSDQME---RGVAEELRRRFRPEFLNRI 175
KG+TVD KN++IIMTSNIG +I ++ GS E V E +R+ FRPEFLNRI
Sbjct: 711 KGRTVDFKNSVIIMTSNIGGHIILEGTLNAMFGSTNTETVKNQVMELMRQHFRPEFLNRI 770
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
DEV+ F LN QL +IVDI L + + + + ++L +T K+ L GY+P+YGARPL
Sbjct: 771 DEVVFFNALNMQQLAQIVDIQLDRLRKLVAERELKLEITEDAKELLATRGYDPAYGARPL 830
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
+R I + LE+ L++ +L G GD++ +D
Sbjct: 831 KRVIRQYLENPLSKSLLEGRFIDGDTIKIDV 861
>gi|296140886|ref|YP_003648129.1| ATPase AAA [Tsukamurella paurometabola DSM 20162]
gi|296029020|gb|ADG79790.1| ATPase AAA-2 domain protein [Tsukamurella paurometabola DSM 20162]
Length = 853
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 145/269 (53%), Positives = 194/269 (72%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP+RPI SFLF GPTGVGKTELA ALA FG ++ ++R DMSE+ EKHTVS+
Sbjct: 552 RARAGLKDPSRPIGSFLFLGPTGVGKTELAKALAATVFGDEDRLIRFDMSEFQEKHTVSR 611
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E GQLT+ VR +P+SVILFDEIEKAH DV N++LQLLDDGRVTD +G+
Sbjct: 612 LVGAPPGYVGYEEAGQLTDKVRRQPYSVILFDEIEKAHPDVFNILLQLLDDGRVTDAQGR 671
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVFRQL 184
TVD KNTI+I+TSNIG +I + + V E L FRPEFLNRID+ ++F +L
Sbjct: 672 TVDFKNTIVILTSNIGADLILEAPEDDWESVVPKVKERLNAHFRPEFLNRIDDTVIFHRL 731
Query: 185 NKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGRLLE 244
+K Q+ IV+++L+ L ++++L VT + L EEG+ P +GARPLRR + + L+
Sbjct: 732 DKEQIRNIVELILESTRGLLRGQDVQLDVTEKAEDWLAEEGFQPQFGARPLRRTVQKELD 791
Query: 245 DNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
+ L+ ++L G I GD+V +D D G VI
Sbjct: 792 NRLSSMLLKGEIVPGDTVRVDADDNGLVI 820
>gi|359493969|ref|XP_002283802.2| PREDICTED: chaperone protein ClpD, chloroplastic-like [Vitis
vinifera]
gi|147770910|emb|CAN67541.1| hypothetical protein VITISV_012383 [Vitis vinifera]
gi|302142786|emb|CBI20081.3| unnamed protein product [Vitis vinifera]
Length = 946
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 146/290 (50%), Positives = 208/290 (71%), Gaps = 12/290 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+RVG++DPNRPI++ LF GPTGVGKTELA ALA YFGS+ AMVR+DMSEYME+H+
Sbjct: 643 AVKRSRVGLKDPNRPIAAMLFCGPTGVGKTELAKALAACYFGSEAAMVRLDMSEYMEQHS 702
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG+ GG LTEA+R +P +V+L DEIEKAH D+ N++LQ+ +DG +TD
Sbjct: 703 VSKLIGSPPGYVGYGEGGTLTEAIRRQPFTVVLLDEIEKAHPDIFNILLQMFEDGHLTDS 762
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA--RESILG----SDQ------MERGVAEELRRRFRP 169
+G+ V +N +++MTSN+G + IA R+S +G D+ M+ V EEL+ FRP
Sbjct: 763 QGRRVLFRNALVVMTSNVGSAAIAKGRQSSIGFSIADDEPTSYAGMKALVMEELKAYFRP 822
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
E LNR+DE++VF L K Q++EI++ ML+E+ ERL + + + V+ + L ++GY+ +
Sbjct: 823 ELLNRLDEIVVFHPLEKAQMLEILNTMLQEVKERLSSLGIGMEVSVSVIDLLCQQGYDKN 882
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRN 279
YGARPLRRA+ ++ED L+E +LT Q GD +D D+ GN + + N
Sbjct: 883 YGARPLRRAVTLIIEDPLSEALLTEEYQPGDIAVVDLDASGNPFVRKQSN 932
>gi|300722275|ref|YP_003711559.1| ATP-dependent protease [Xenorhabdus nematophila ATCC 19061]
gi|297628776|emb|CBJ89354.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Xenorhabdus nematophila ATCC
19061]
Length = 857
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 150/277 (54%), Positives = 203/277 (73%), Gaps = 3/277 (1%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SF+F GPTGVGKTEL ALA F S +AMVRIDMSE+MEKH+
Sbjct: 583 AIRRSRAGLSDPNRPIGSFMFLGPTGVGKTELCKALANFLFDSDDAMVRIDMSEFMEKHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA-RESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+T+D +NT++IMTSN+G +I R L M+ V E + FRPEF+NRIDE++V
Sbjct: 703 QGRTIDFRNTVVIMTSNLGSDMIQERFGSLDYAGMKDMVMEVVGHHFRPEFINRIDEIVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L K L+ I +I L+ +Y+RLE + ++ +T + KL E G++P YGARPL+RAI
Sbjct: 763 FHPLGKEHLVSIANIQLQRLYQRLEERGYQVVMTPSALDKLSEAGFDPVYGARPLKRAIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRH 277
+ +E+ LA+ IL+G + G+ VT+D ++ N I+ R
Sbjct: 823 QEIENPLAQQILSGKLIPGELVTLDLEN--NHIIARQ 857
>gi|217978067|ref|YP_002362214.1| ATP-dependent chaperone ClpB [Methylocella silvestris BL2]
gi|217503443|gb|ACK50852.1| ATP-dependent chaperone ClpB [Methylocella silvestris BL2]
Length = 864
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 146/273 (53%), Positives = 198/273 (72%), Gaps = 1/273 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DPNRPI SF+F GPTGVGKTEL ALA F + A++RIDMSEYMEKH+
Sbjct: 583 AVRRARAGLQDPNRPIGSFMFLGPTGVGKTELTKALAAFLFDDENALLRIDMSEYMEKHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG+E GG LTEAVR RP+ V+LFDEIEKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VARLIGAPPGYVGYEEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDS-VIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +N +IIMTSN+G ++ ++ S+ + V + +R FRPEFLNR+DE+I+
Sbjct: 703 QGRTVDFRNVLIIMTSNLGSEFLVLQKEGEDSNAVHSEVMQVVRAHFRPEFLNRVDEIIL 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F +L + + IVDI LK + LE + + L +T + L E+GY+P+YGARPL+R I
Sbjct: 763 FHRLRRQDMGAIVDIQLKRLDRLLEDRKITLELTPQARDWLAEKGYDPAYGARPLKRVIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
+ L+D LAE IL+G I G+ V + D G +I
Sbjct: 823 KALQDPLAEAILSGKIHDGEHVRIGADEKGLLI 855
>gi|54294637|ref|YP_127052.1| endopeptidase Clp ATP-binding chain B (ClpB) [Legionella
pneumophila str. Lens]
gi|53754469|emb|CAH15953.1| endopeptidase Clp ATP-binding chain B (ClpB) [Legionella
pneumophila str. Lens]
Length = 858
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 143/269 (53%), Positives = 195/269 (72%), Gaps = 1/269 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F ++EAMVRIDMSE+MEKH+
Sbjct: 583 AIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALASFLFDTEEAMVRIDMSEFMEKHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ++DDGR+TDG
Sbjct: 643 VARLIGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHTDVFNILLQVMDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-ESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT+I+MTSN+G +I S D+++ V + + + FRPEF+NRIDE +V
Sbjct: 703 QGRTVDFRNTVIVMTSNLGSQLIQEMSSKFNYDEIKAAVMDLVSQHFRPEFINRIDESVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L K Q+ +I I + ++ RL+ +N+ L VT L E G++P YGARPL+R I
Sbjct: 763 FHSLTKEQIAKIAAIQINYLHHRLKQQNITLEVTSEALSHLAEAGFDPVYGARPLKRTIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
+ LE+ LA+ +LTG + GD++ + G
Sbjct: 823 QKLENPLAQSLLTGKFKSGDTIIVSYKDG 851
>gi|317493980|ref|ZP_07952397.1| ATP-dependent chaperone ClpB [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316918307|gb|EFV39649.1| ATP-dependent chaperone ClpB [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 857
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 148/277 (53%), Positives = 201/277 (72%), Gaps = 3/277 (1%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F S +AMVRIDMSE+MEKH+
Sbjct: 583 AIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFLFDSDDAMVRIDMSEFMEKHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA-RESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT++IMTSN+G +I R L +M+ V + FRPEF+NRIDE +V
Sbjct: 703 QGRTVDFRNTVVIMTSNLGSDLIQDRFGQLDYGEMKELVMSVVSHHFRPEFINRIDETVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L++ + I I L+ +Y+RLE K +T+T ++L + G++P YGARPL+RAI
Sbjct: 763 FHPLDQKNIKAIARIQLERLYQRLEEKGYSVTITDAALEQLSKAGFDPVYGARPLKRAIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRH 277
+ +E+ LA+ IL+G + G ++T+D D G+ I+ +
Sbjct: 823 QEIENPLAQQILSGKLIPGKAITLDVD--GDQIIAKQ 857
>gi|442805484|ref|YP_007373633.1| chaperone protein ClpB [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442741334|gb|AGC69023.1| chaperone protein ClpB [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 865
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 145/268 (54%), Positives = 201/268 (75%), Gaps = 5/268 (1%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++D NRPI SF+F GPTGVGKT+LA LA F S+E ++RIDMSEYMEKH+V+K
Sbjct: 589 RARAGLKDLNRPIGSFIFLGPTGVGKTQLAKTLAEALFDSEENLIRIDMSEYMEKHSVAK 648
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E GGQLTEAVR +P+SVILFDEIEKAH DV N++LQLLDDGR+TD +G+
Sbjct: 649 LIGAPPGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHPDVFNLLLQLLDDGRLTDSQGR 708
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG----SDQMERGVAEELRRRFRPEFLNRIDEVIV 180
TV+ KN +IIMTSNIG ++ ESI S+ + V + L+ FRPEFLNR+D++++
Sbjct: 709 TVNFKNAVIIMTSNIGSDILL-ESITENGEISETVRNMVMDSLKNYFRPEFLNRVDDIVL 767
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F+ L + ++ I+D++L E+ ERL+ +N++L +T K+ +++ Y+PSYGARPLRR I
Sbjct: 768 FKPLGRKEIYGIIDLILNELRERLKDRNIKLEITDEAKEVILDRAYSPSYGARPLRRFIQ 827
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDS 268
+++E +L I+ G I G T+D D+
Sbjct: 828 KVIETDLGRRIIAGEIHEGSVATIDADN 855
>gi|217967862|ref|YP_002353368.1| ATPase [Dictyoglomus turgidum DSM 6724]
gi|217336961|gb|ACK42754.1| ATPase AAA-2 domain protein [Dictyoglomus turgidum DSM 6724]
Length = 823
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 142/285 (49%), Positives = 201/285 (70%), Gaps = 10/285 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G++DP RPI F+F GPTGVGKTELA ALA FG++ A++R DMSE+MEKHT
Sbjct: 531 AIRRSRSGLKDPRRPIGVFMFLGPTGVGKTELARALAEYLFGNENALIRFDMSEFMEKHT 590
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTE V RP+SVILFDEIEKAH DV N++LQ++D+G++TDG
Sbjct: 591 VSRLIGAPPGYVGYEEGGQLTEKVHRRPYSVILFDEIEKAHSDVFNILLQIMDEGQLTDG 650
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
G+ V KNTI+IMTSN G +E+ +G D+++ + E+++ FRPEF
Sbjct: 651 HGRRVSFKNTILIMTSNFGAEYFKQEASIGFASKEDREKSFDKIKDLILSEMKKYFRPEF 710
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNR+DE++ F+ L K L +I++++LK + ER+ K +EL ++ K+ L+E+GY+P YG
Sbjct: 711 LNRLDEIVFFKPLTKEDLKQILELLLKPVQERIREKKLELEISDEVKELLLEKGYDPQYG 770
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYR 276
ARPL+R I +ED LAE IL G + GD + + D G ++ +
Sbjct: 771 ARPLKRTIQYYIEDPLAEFILQGDFKEGDIIRAELDKKGEIVFRK 815
>gi|17864015|gb|AAL47016.1|AF449501_1 ClpB ATP protease [Paracoccidioides brasiliensis]
Length = 792
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 149/269 (55%), Positives = 196/269 (72%), Gaps = 7/269 (2%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
R+R G+ DPNRP SFLF GPTGVGKTEL ALA F S +AM+RIDMSE+MEKH+VS+
Sbjct: 517 RSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDDAMIRIDMSEFMEKHSVSR 576
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E GG LTEAVR +P+SV+LFDE+EKAH DV N++LQ+LDDGR+TD +G+
Sbjct: 577 LVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFNILLQVLDDGRLTDSQGR 636
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGS----DQMERGVAEELRRRFRPEFLNRIDEVIV 180
VD KNT+I+MTSN+G S + RE LG D + V + FRPEF+NRIDE++V
Sbjct: 637 VVDFKNTVIVMTSNLGSSDV-RE--LGDNPSRDDVRNVVMAAVSEHFRPEFINRIDELVV 693
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L K Q+ I DI L + RL ++++LTV + +LIE G++P YGARPL+RAI
Sbjct: 694 FHALEKAQIRGIADIQLDRLRARLADRDIKLTVDDSAFDQLIEAGFDPVYGARPLKRAIQ 753
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
+ +E+NLA+ IL G Q GD++ + D+G
Sbjct: 754 QQVENNLAQKILAGDFQPGDTIVITADAG 782
>gi|365834579|ref|ZP_09376024.1| ATP-dependent chaperone protein ClpB [Hafnia alvei ATCC 51873]
gi|364568968|gb|EHM46597.1| ATP-dependent chaperone protein ClpB [Hafnia alvei ATCC 51873]
Length = 857
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 148/277 (53%), Positives = 201/277 (72%), Gaps = 3/277 (1%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F S +AMVRIDMSE+MEKH+
Sbjct: 583 AIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFLFDSDDAMVRIDMSEFMEKHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA-RESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT++IMTSN+G +I R L +M+ V + FRPEF+NRIDE +V
Sbjct: 703 QGRTVDFRNTVVIMTSNLGSDLIQDRFGQLDYGEMKELVMSVVSHHFRPEFINRIDETVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L++ + I I L+ +Y+RLE K +T+T ++L + G++P YGARPL+RAI
Sbjct: 763 FHPLDQKNIKAIARIQLERLYQRLEEKGYSVTITDAALEQLSKAGFDPVYGARPLKRAIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRH 277
+ +E+ LA+ IL+G + G ++T+D D G+ I+ +
Sbjct: 823 QEIENPLAQQILSGKLIPGKAITLDVD--GDQIIAKQ 857
>gi|170288547|ref|YP_001738785.1| ATPase [Thermotoga sp. RQ2]
gi|170176050|gb|ACB09102.1| ATPase AAA-2 domain protein [Thermotoga sp. RQ2]
Length = 820
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 149/266 (56%), Positives = 194/266 (72%), Gaps = 11/266 (4%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI FLF GPTGVGKTELA ALA FG + A++R DMSEYME+ +VS+ G+
Sbjct: 533 GLKDPRRPIGVFLFLGPTGVGKTELAKALAEYLFGDERALIRFDMSEYMERFSVSRLIGA 592
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG+E GG LTE VR RP SVILFDEIEKAH DV N++LQ++DDGR+TD +G+ VD
Sbjct: 593 PPGYVGYEEGGTLTEKVRRRPFSVILFDEIEKAHPDVFNILLQIMDDGRLTDSQGREVDF 652
Query: 129 KNTIIIMTSNIGDSVIARES----ILGSDQMERG-------VAEELRRRFRPEFLNRIDE 177
+NTIIIMTSNIG S I + +G + ER V EE++R FRPEFLNRIDE
Sbjct: 653 RNTIIIMTSNIGSSYINKSKRTLGFVGDNNEEREFEKIKDLVLEEVKRTFRPEFLNRIDE 712
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
I+F L K + +I+DI+L+++ +RL KNM+L +T + K+ L+E+G++P YGARPL+R
Sbjct: 713 TIIFHPLKKEHIEQIIDILLRDLRKRLSEKNMKLVLTKSAKEFLVEKGFDPVYGARPLKR 772
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVT 263
AI R +ED L+E IL G GD++
Sbjct: 773 AIQRYVEDPLSEEILRGKFNEGDTIV 798
>gi|433461663|ref|ZP_20419269.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Halobacillus
sp. BAB-2008]
gi|432189835|gb|ELK46900.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Halobacillus
sp. BAB-2008]
Length = 819
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 144/289 (49%), Positives = 205/289 (70%), Gaps = 9/289 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+RIDMSEYMEKH+
Sbjct: 530 AIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEEDAMIRIDMSEYMEKHS 589
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG++ GGQLTE VR++P+SV+L DEIEKAH +V N++LQ+L+DGR+TD
Sbjct: 590 TSRLVGSPPGYVGYDEGGQLTEKVRNKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDS 649
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG-----SDQ----MERGVAEELRRRFRPEFL 172
KG+ VD +NT++IMTSN+G S + + +G +DQ M+ V + L++ FRPEFL
Sbjct: 650 KGRLVDFRNTVLIMTSNVGASELKQNKYVGFSMGEADQDYKDMKSKVTDALKKAFRPEFL 709
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE IVF L K + +IV +M +E+ +RL+ + ++ T++ + + + G++P YGA
Sbjct: 710 NRIDETIVFHSLEKKHMKDIVVLMAEELRKRLQEQEIDFTLSDAAIQHIADSGFDPEYGA 769
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGS 281
RPLRRAI + +ED L+E +L I G V +D D N +++ + +
Sbjct: 770 RPLRRAIQKNVEDLLSEELLKENIAKGQKVKIDLDENKNYVVHTQQEST 818
>gi|332800110|ref|YP_004461609.1| ATPase AAA-2 domain-containing protein [Tepidanaerobacter
acetatoxydans Re1]
gi|438003416|ref|YP_007273159.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB
[Tepidanaerobacter acetatoxydans Re1]
gi|332697845|gb|AEE92302.1| ATPase AAA-2 domain protein [Tepidanaerobacter acetatoxydans Re1]
gi|432180210|emb|CCP27183.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB
[Tepidanaerobacter acetatoxydans Re1]
Length = 813
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 150/268 (55%), Positives = 195/268 (72%), Gaps = 10/268 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RA G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+R+DMSEYMEK
Sbjct: 520 AIRRAYAGLKDPARPIGSFIFLGPTGVGKTELARALADAMFGDEDAMIRLDMSEYMEKFA 579
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG+LTE VR RP+SVILFDEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 580 VSRIVGAPPGYVGYEEGGELTEKVRRRPYSVILFDEIEKAHPDVFNILLQILEDGRLTDA 639
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---SDQMERGVAE-------ELRRRFRPEF 171
KG+TVD +NTI+IMTSN+G ++I + +LG + E+ AE EL+R F+PEF
Sbjct: 640 KGRTVDFRNTILIMTSNVGANLIQKPKVLGFAPVQEEEKSYAEMKDMVLNELKRTFKPEF 699
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNRIDE+IVF L++ + EIV +M+ E+ RL K + + VT K L +EGY+P YG
Sbjct: 700 LNRIDEIIVFHPLSEEHIREIVTLMIDEVNRRLTEKQISIEVTDKAKDVLAKEGYDPMYG 759
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVG 259
ARPLRR I + +ED L+E +L G I G
Sbjct: 760 ARPLRRVIQKRIEDRLSEEMLKGSITDG 787
>gi|89893184|ref|YP_516671.1| hypothetical protein DSY0438 [Desulfitobacterium hafniense Y51]
gi|219666457|ref|YP_002456892.1| ATPase AAA [Desulfitobacterium hafniense DCB-2]
gi|423073164|ref|ZP_17061907.1| negative regulator of genetic competence ClpC/MecB
[Desulfitobacterium hafniense DP7]
gi|89332632|dbj|BAE82227.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219536717|gb|ACL18456.1| ATPase AAA-2 domain protein [Desulfitobacterium hafniense DCB-2]
gi|361855994|gb|EHL07928.1| negative regulator of genetic competence ClpC/MecB
[Desulfitobacterium hafniense DP7]
Length = 826
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 141/274 (51%), Positives = 202/274 (73%), Gaps = 9/274 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RP+ SF+F GPTGVGKTELA ALA FG ++A++RIDMSEYMEKH
Sbjct: 531 AVRRARAGLKDPKRPVGSFIFLGPTGVGKTELARALAEALFGEEDALIRIDMSEYMEKHA 590
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGY+G + GGQLTEA+R +P+SVIL DEIEKAH +V N++LQ+L+DGR+TD
Sbjct: 591 VSRLVGAPPGYIGHDEGGQLTEAIRRKPYSVILLDEIEKAHPEVFNILLQVLEDGRLTDT 650
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQ---------MERGVAEELRRRFRPEFL 172
KG+TVD +N +IIMTSN+G S + +E++ + + M V EEL++ FRPEFL
Sbjct: 651 KGRTVDFRNAVIIMTSNVGASFMKKEALGFASRRDEETEYKNMSSRVMEELKKTFRPEFL 710
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NR+DE++VF L L++I +I++K++ RL+ + +L V + + + +EG +P++GA
Sbjct: 711 NRVDEIVVFHSLQTEGLLKITEILMKQVNGRLQEQGYDLQVEKSALELIAKEGNDPTFGA 770
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
RPLRRAI RL+ED+L+E IL G + GD + ++
Sbjct: 771 RPLRRAIQRLIEDSLSEKILLGEFKSGDKIKVEA 804
>gi|392392052|ref|YP_006428654.1| chaperone ATPase [Desulfitobacterium dehalogenans ATCC 51507]
gi|390523130|gb|AFL98860.1| ATPase with chaperone activity, ATP-binding subunit
[Desulfitobacterium dehalogenans ATCC 51507]
Length = 826
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 145/283 (51%), Positives = 207/283 (73%), Gaps = 11/283 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RP+ SF+F GPTGVGKTELA AL+ FG ++A++RIDMSEYMEKH
Sbjct: 531 AVRRARAGLKDPKRPVGSFIFLGPTGVGKTELARALSEALFGEEDALIRIDMSEYMEKHA 590
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGY+G + GGQLTEAVR +P+SVIL DEIEKAH +V N++LQ+L+DGR+TD
Sbjct: 591 VSRLVGAPPGYIGHDEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQVLEDGRLTDT 650
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQ---------MERGVAEELRRRFRPEFL 172
KG+TVD +N +IIMTSN+G S + +E++ + + M V EEL+R FRPEFL
Sbjct: 651 KGRTVDFRNAVIIMTSNVGASFMRKEALGFASRRDEETEYKNMSSRVMEELKRTFRPEFL 710
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NR+DE++VF L LM+I +I++K++ RL+ + +L V + + + +EG +P++GA
Sbjct: 711 NRVDEIVVFHSLQAEGLMKITEILMKQVNGRLKEQGYDLQVEKSALELIAKEGNDPAFGA 770
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMY 275
RPLRRAI RL+ED+L+E IL G + GD + ++ + GN + +
Sbjct: 771 RPLRRAIQRLIEDSLSEKILLGEFKSGDKIKVEEE--GNKMKF 811
>gi|229074143|ref|ZP_04207189.1| Negative regulator of genetic competence [Bacillus cereus Rock4-18]
gi|229094804|ref|ZP_04225809.1| Negative regulator of genetic competence [Bacillus cereus Rock3-29]
gi|229100880|ref|ZP_04231685.1| Negative regulator of genetic competence [Bacillus cereus Rock3-28]
gi|229113758|ref|ZP_04243193.1| Negative regulator of genetic competence [Bacillus cereus Rock1-3]
gi|407708030|ref|YP_006831615.1| ATP/GTP hydrolase [Bacillus thuringiensis MC28]
gi|423381871|ref|ZP_17359154.1| chaperone ClpB [Bacillus cereus BAG1O-2]
gi|423439740|ref|ZP_17416646.1| chaperone ClpB [Bacillus cereus BAG4X2-1]
gi|423450103|ref|ZP_17426981.1| chaperone ClpB [Bacillus cereus BAG5O-1]
gi|423467997|ref|ZP_17444765.1| chaperone ClpB [Bacillus cereus BAG6O-1]
gi|423537397|ref|ZP_17513815.1| chaperone ClpB [Bacillus cereus HuB2-9]
gi|423543125|ref|ZP_17519513.1| chaperone ClpB [Bacillus cereus HuB4-10]
gi|423543569|ref|ZP_17519927.1| chaperone ClpB [Bacillus cereus HuB5-5]
gi|423620310|ref|ZP_17596141.1| chaperone ClpB [Bacillus cereus VD115]
gi|423626976|ref|ZP_17602751.1| chaperone ClpB [Bacillus cereus VD148]
gi|228669629|gb|EEL25036.1| Negative regulator of genetic competence [Bacillus cereus Rock1-3]
gi|228682534|gb|EEL36606.1| Negative regulator of genetic competence [Bacillus cereus Rock3-28]
gi|228688547|gb|EEL42420.1| Negative regulator of genetic competence [Bacillus cereus Rock3-29]
gi|228708913|gb|EEL61040.1| Negative regulator of genetic competence [Bacillus cereus Rock4-18]
gi|401126726|gb|EJQ34460.1| chaperone ClpB [Bacillus cereus BAG5O-1]
gi|401166825|gb|EJQ74125.1| chaperone ClpB [Bacillus cereus HuB4-10]
gi|401187734|gb|EJQ94806.1| chaperone ClpB [Bacillus cereus HuB5-5]
gi|401248870|gb|EJR55191.1| chaperone ClpB [Bacillus cereus VD115]
gi|401250171|gb|EJR56475.1| chaperone ClpB [Bacillus cereus VD148]
gi|401628497|gb|EJS46338.1| chaperone ClpB [Bacillus cereus BAG1O-2]
gi|402411864|gb|EJV44227.1| chaperone ClpB [Bacillus cereus BAG6O-1]
gi|402421921|gb|EJV54165.1| chaperone ClpB [Bacillus cereus BAG4X2-1]
gi|402459103|gb|EJV90841.1| chaperone ClpB [Bacillus cereus HuB2-9]
gi|407385715|gb|AFU16216.1| Negative regulator of genetic competence [Bacillus thuringiensis
MC28]
Length = 811
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 146/274 (53%), Positives = 195/274 (71%), Gaps = 9/274 (3%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+RIDMSEYMEKH+ S+ GS
Sbjct: 531 GLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGS 590
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG+E GGQLTE VR +P+SV+L DE+EKAH DV N++LQ+L+DGR+TD KG+TVD
Sbjct: 591 PPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDF 650
Query: 129 KNTIIIMTSNIGDSVIARESILGSD---------QMERGVAEELRRRFRPEFLNRIDEVI 179
+NTI+IMTSN+G + R LG + M+ V +EL++ FRPEFLNRIDE+I
Sbjct: 651 RNTIVIMTSNVGADALKRNKYLGFNVQDESRDYSDMKGKVMDELKKAFRPEFLNRIDEII 710
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF L K + EIV +M+ ++ RL+ + +EL +T + ++G++ YGARPLRRAI
Sbjct: 711 VFHMLEKKHIQEIVTLMVNQLVNRLKEQEIELQLTEGAISAIADKGFDREYGARPLRRAI 770
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
+ +ED L+E +L G I+ G V D + VI
Sbjct: 771 QKHVEDRLSEELLKGAIEKGQKVIFDVEGESFVI 804
>gi|409402759|ref|ZP_11252252.1| chaperone protein ClpB [Acidocella sp. MX-AZ02]
gi|409128742|gb|EKM98629.1| chaperone protein ClpB [Acidocella sp. MX-AZ02]
Length = 859
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 149/274 (54%), Positives = 196/274 (71%), Gaps = 3/274 (1%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DPNRPI SFLF GPTGVGKTEL ALA F + AMVRIDMSE+MEKH
Sbjct: 579 AVRRARAGLQDPNRPIGSFLFLGPTGVGKTELTKALAEFLFDDERAMVRIDMSEFMEKHA 638
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GG LTEAVR RP+ V+LFDE+EKAH DV NV+LQ+LDDGR+TDG
Sbjct: 639 VSRLIGAPPGYVGYDEGGVLTEAVRRRPYQVVLFDEVEKAHEDVFNVLLQVLDDGRLTDG 698
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD--QMERGVAEELRRRFRPEFLNRIDEVI 179
+G+TVD KNTII++TSN+G ++A ++ G D E GV +R FRPEFLNR+DE++
Sbjct: 699 QGRTVDFKNTIIVLTSNLGSDILAAQT-EGEDVRLAEAGVMARVREHFRPEFLNRLDEIV 757
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
+F +L + + IV I LK + L +N+ L + + + L E GY+P YGARPL+R I
Sbjct: 758 LFGRLQRADMGAIVSIQLKRLEALLAERNIRLELDQSARDWLAEAGYDPVYGARPLKRVI 817
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
R L++ LA +IL G ++ G+SV + G VI
Sbjct: 818 QRNLQNPLAGLILEGAVKDGESVKVSGSPDGLVI 851
>gi|228912821|ref|ZP_04076468.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228846757|gb|EEM91762.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 811
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 146/274 (53%), Positives = 196/274 (71%), Gaps = 9/274 (3%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+RIDMSEYMEKH+ S+ GS
Sbjct: 531 GLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGS 590
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG+E GGQLTE VR +P+SV+L DE+EKAH DV N++LQ+L+DGR+TD KG+TVD
Sbjct: 591 PPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDF 650
Query: 129 KNTIIIMTSNIGDSVIARESILGSD---------QMERGVAEELRRRFRPEFLNRIDEVI 179
+NTI+IMTSN+G + R LG + +M+ V +EL++ FRPEFLNRIDE+I
Sbjct: 651 RNTIVIMTSNVGAEALKRNKHLGFNVQDESRDYSEMKGKVMDELKKAFRPEFLNRIDEII 710
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF L K + EIV +M+ ++ RL+ + +EL +T + ++G++ YGARPLRRAI
Sbjct: 711 VFHMLEKKHIQEIVTLMVNQLVNRLKEQEIELHLTEGAISAIADKGFDREYGARPLRRAI 770
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
+ +ED L+E +L G I+ G V D + VI
Sbjct: 771 QKHVEDRLSEELLKGAIEKGQKVIFDVEGESFVI 804
>gi|332295188|ref|YP_004437111.1| ATPase AAA [Thermodesulfobium narugense DSM 14796]
gi|332178291|gb|AEE13980.1| ATPase AAA-2 domain protein [Thermodesulfobium narugense DSM 14796]
Length = 812
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 145/275 (52%), Positives = 200/275 (72%), Gaps = 8/275 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
TL R R G++DP +P+ SFLF GPTGVGKTELA LA FGS+E+++R DMSEYMEKHT
Sbjct: 518 TLRRTRAGLQDPKKPLGSFLFLGPTGVGKTELAKTLAEYLFGSEESLLRFDMSEYMEKHT 577
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+ GGQLT+AVR RP SVILFDEIEKAH DV N++LQ+LDDGR+TDG
Sbjct: 578 VSRLIGAPPGYVGYTEGGQLTDAVRRRPSSVILFDEIEKAHPDVFNLLLQILDDGRLTDG 637
Query: 122 KGQTVDLKNTIIIMTSNIGDSV--------IARESILGSDQMERGVAEELRRRFRPEFLN 173
KG+TV+ KNTI+IMTSN+G + +A + L ++++ + EL+ FRPEFLN
Sbjct: 638 KGRTVNFKNTILIMTSNLGTHMLKEGSPGFLASSNSLDYEKLKSQIQRELKDTFRPEFLN 697
Query: 174 RIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGAR 233
RIDE+I+F L + ++ I ML+ + E+L+ +++T + +L +EGY+P +GAR
Sbjct: 698 RIDEIIIFNSLTQEDMINITKKMLENVKEKLKVNLIDITFSEKVVNQLAKEGYDPKFGAR 757
Query: 234 PLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDS 268
PL+R I + +ED +A+ I+ G I+ DS+ +D DS
Sbjct: 758 PLKRLIQKKIEDPIADKIIEGSIKQCDSIEVDFDS 792
>gi|291523120|emb|CBK81413.1| ATP-dependent chaperone ClpB [Coprococcus catus GD/7]
Length = 864
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 151/277 (54%), Positives = 197/277 (71%), Gaps = 5/277 (1%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
R++ GI+D NRPI SFLF GPTGVGKTELA ALA F + MVRIDMSEYMEK +VS+
Sbjct: 586 RSKAGIQDENRPIGSFLFLGPTGVGKTELAKALAENLFDDENNMVRIDMSEYMEKFSVSR 645
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E GGQLTEAVR +P+SVILFDEIEKAH DV NV+LQ+LDDGRVTD +G+
Sbjct: 646 LIGAPPGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHPDVFNVLLQILDDGRVTDSQGR 705
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG----SDQMERGVAEELRRRFRPEFLNRIDEVIV 180
TVD KNTI+IMTSNIG S + E I SD+ + +L+ FRPEFLNR+DE+I+
Sbjct: 706 TVDFKNTILIMTSNIGSSYLL-EGIDSEGNISDEARQNTMNDLKAHFRPEFLNRLDEIIM 764
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F+ L K + I+DI++ + +RLE K + L +T K + + GY+P YGARPL+R I
Sbjct: 765 FKPLTKDNISGIIDILIGRLNKRLETKELTLQLTPAAKDYITDHGYDPVYGARPLKRYIQ 824
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRH 277
+ +E +A++IL ++ GD + +D D+ G H
Sbjct: 825 KNVETMVAKMILGNELEPGDCINVDADANGLTTTTTH 861
>gi|54297663|ref|YP_124032.1| endopeptidase Clp ATP-binding chain B (ClpB) [Legionella
pneumophila str. Paris]
gi|296107341|ref|YP_003619041.1| ATP-dependent Clp protease [Legionella pneumophila 2300/99 Alcoy]
gi|53751448|emb|CAH12866.1| endopeptidase Clp ATP-binding chain B (ClpB) [Legionella
pneumophila str. Paris]
gi|295649242|gb|ADG25089.1| ATP-dependent Clp protease [Legionella pneumophila 2300/99 Alcoy]
gi|307610448|emb|CBX00019.1| endopeptidase Clp ATP-binding chain B [Legionella pneumophila 130b]
Length = 858
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 143/269 (53%), Positives = 195/269 (72%), Gaps = 1/269 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F ++EAMVRIDMSE+MEKH+
Sbjct: 583 AIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALASFLFDTEEAMVRIDMSEFMEKHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ++DDGR+TDG
Sbjct: 643 VARLIGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHTDVFNILLQVMDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-ESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT+I+MTSN+G +I S D+++ V + + + FRPEF+NRIDE +V
Sbjct: 703 QGRTVDFRNTVIVMTSNLGSQLIQEMSSKFNYDEIKAAVMDLVSQHFRPEFINRIDESVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L K Q+ +I I + ++ RL+ +N+ L VT L E G++P YGARPL+R I
Sbjct: 763 FHSLTKEQIAKIAAIQINYLHHRLKQQNITLEVTSEALSHLAEAGFDPVYGARPLKRTIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
+ LE+ LA+ +LTG + GD++ + G
Sbjct: 823 QKLENPLAQSLLTGKFKSGDTIIVSYKDG 851
>gi|253580252|ref|ZP_04857518.1| clp protease ATP binding subunit [Ruminococcus sp. 5_1_39B_FAA]
gi|251848345|gb|EES76309.1| clp protease ATP binding subunit [Ruminococcus sp. 5_1_39BFAA]
Length = 863
Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 148/280 (52%), Positives = 201/280 (71%), Gaps = 7/280 (2%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
R++ GI+DP +PI SFLF GPTGVGKTELA LA F ++ MVRIDMSEYMEK++VS+
Sbjct: 586 RSKAGIKDPTKPIGSFLFLGPTGVGKTELAKTLAENLFDDEQNMVRIDMSEYMEKYSVSR 645
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E GGQLTEAVR +P+SV+LFDEIEKAH DV NV+LQ+LDDGR+TD +G+
Sbjct: 646 LIGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRITDSQGR 705
Query: 125 TVDLKNTIIIMTSNIG-----DSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVI 179
TVD KNTI+IMTSNIG D + I Q + V ++LR FRPEFLNR+DE+I
Sbjct: 706 TVDFKNTILIMTSNIGSPYLLDGIDENGEIKPEAQSQ--VMDDLRGHFRPEFLNRLDEII 763
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
+F+ L K + +IVD+M+ E+ +RL + + L +T K ++IE GY+P YGARPL+R +
Sbjct: 764 MFKPLTKSNIGKIVDLMVGELDKRLADQELSLELTDAAKDQVIENGYDPVYGARPLKRYL 823
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRN 279
+ +E A IL+G + GD++ +D +G ++ + N
Sbjct: 824 QKYVETLAARKILSGDVHAGDTLVLDVQNGEFIVTVKDGN 863
>gi|39995764|ref|NP_951715.1| ATP-dependent chaperone ClpB [Geobacter sulfurreducens PCA]
gi|409911208|ref|YP_006889673.1| ATP-dependent chaperone ClpB [Geobacter sulfurreducens KN400]
gi|54035778|sp|Q74FF1.1|CLPB_GEOSL RecName: Full=Chaperone protein ClpB
gi|39982528|gb|AAR33988.1| ATP-dependent chaperone ClpB [Geobacter sulfurreducens PCA]
gi|298504774|gb|ADI83497.1| ATP-dependent chaperone ClpB [Geobacter sulfurreducens KN400]
Length = 865
Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 146/270 (54%), Positives = 195/270 (72%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G+ DPNRPI SFLF GPTGVGKTE A ALA F +A+VRIDMSEY EKHT
Sbjct: 589 AIRRARSGLSDPNRPIGSFLFLGPTGVGKTETAKALAEFLFNDDQAIVRIDMSEYQEKHT 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG+E GGQLTEAVR RP+S++LFDEIEKAH +V NV+LQ+LDDGR+TDG
Sbjct: 649 VARLIGAPPGYVGYEEGGQLTEAVRRRPYSIVLFDEIEKAHPEVFNVLLQVLDDGRLTDG 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVF 181
+G+TVD +NT+IIMTSN+G I + +M+ V E L+ F+PEFLNRIDE++++
Sbjct: 709 QGRTVDFRNTVIIMTSNLGSQWIQQYGSSDYARMKAMVTETLKEGFKPEFLNRIDEIVIY 768
Query: 182 RQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGR 241
L Q+ +IVDI ++ + +RL + + L ++ ++ L EGY+P+YGARPL+R I R
Sbjct: 769 HALPLEQIKKIVDIQVECLKQRLADRRIVLELSDKAREYLSREGYDPAYGARPLKRTIQR 828
Query: 242 LLEDNLAEIILTGYIQVGDSVTMDCDSGGN 271
++D LA +L G Q GD+V +D G
Sbjct: 829 KIQDPLALALLEGKFQEGDTVRVDLSVSGE 858
>gi|397667476|ref|YP_006509013.1| protein disaggregation chaperone [Legionella pneumophila subsp.
pneumophila]
gi|395130887|emb|CCD09136.1| protein disaggregation chaperone [Legionella pneumophila subsp.
pneumophila]
Length = 858
Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 143/269 (53%), Positives = 195/269 (72%), Gaps = 1/269 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F ++EAMVRIDMSE+MEKH+
Sbjct: 583 AIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALASFLFDTEEAMVRIDMSEFMEKHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ++DDGR+TDG
Sbjct: 643 VARLIGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHTDVFNILLQVMDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-ESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT+I+MTSN+G +I S D+++ V + + + FRPEF+NRIDE +V
Sbjct: 703 QGRTVDFRNTVIVMTSNLGSQLIQEMSSKFNYDEIKAAVMDLVSQHFRPEFINRIDESVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L K Q+ +I I + ++ RL+ +N+ L VT L E G++P YGARPL+R I
Sbjct: 763 FHSLTKEQIAKIAAIQINYLHHRLKQQNITLEVTSEALSHLAEAGFDPVYGARPLKRTIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
+ LE+ LA+ +LTG + GD++ + G
Sbjct: 823 QKLENPLAQSLLTGKFKSGDTIIVSYKDG 851
>gi|253990664|ref|YP_003042020.1| chaperone clpb [Photorhabdus asymbiotica]
gi|253782114|emb|CAQ85278.1| chaperone clpb [Photorhabdus asymbiotica]
Length = 857
Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 148/268 (55%), Positives = 195/268 (72%), Gaps = 1/268 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F S +AMVRIDMSE+MEKH
Sbjct: 583 AIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFLFDSDDAMVRIDMSEFMEKHA 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA-RESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT++IMTSN+G +I R L +M+ V + FRPEF+NRIDEV+V
Sbjct: 703 QGRTVDFRNTVVIMTSNLGSDMIQERFGGLNYGEMKDMVMGIVSHHFRPEFINRIDEVVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L + L I DI L+ +Y+RLE + ++ +T + L E G++P YGARPL+RAI
Sbjct: 763 FHPLGRRHLSAIADIQLQRLYKRLEERGYQVAITQQALEMLAEAGFDPVYGARPLKRAIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDS 268
+ +E+ LA+ IL+G + G VT+D ++
Sbjct: 823 QEIENPLAQKILSGQLLPGKPVTLDVEN 850
>gi|91774122|ref|YP_566814.1| ATPase AAA-2 [Methanococcoides burtonii DSM 6242]
gi|91713137|gb|ABE53064.1| Chaperone ClpB/Hsp104 [Methanococcoides burtonii DSM 6242]
Length = 869
Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 151/274 (55%), Positives = 192/274 (70%), Gaps = 2/274 (0%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RA GI+DP RPI SF+F GPTGVGKTELA ALA E F + M+RIDMSEYMEKHTVS+
Sbjct: 590 RAYAGIKDPKRPIGSFIFLGPTGVGKTELAKALAAEMFNDENNMIRIDMSEYMEKHTVSR 649
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGY+G + GGQLTEAVR RP++V+LFDEIEKAH DV NVMLQ+LDDGR+TD G+
Sbjct: 650 LIGAPPGYIGHDEGGQLTEAVRRRPYAVVLFDEIEKAHHDVFNVMLQILDDGRLTDSHGR 709
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSD--QMERGVAEELRRRFRPEFLNRIDEVIVFR 182
TVD KNT+IIMTSNI + G D +M+ EL + FRPEF+NRIDE+ +FR
Sbjct: 710 TVDFKNTLIIMTSNICVDRTLSKLEEGEDYAKMQEMAQNELAKHFRPEFINRIDELAIFR 769
Query: 183 QLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGRL 242
L K QL+ IVDI ++ +RL+ K M L ++ K L E GY+ +YGARPL+R I
Sbjct: 770 PLTKEQLVTIVDIKATDLIQRLKEKRMVLEISKKAKHYLAEAGYSETYGARPLKRVIQNE 829
Query: 243 LEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYR 276
+E +A++I+ G G ++ +D D G V+ R
Sbjct: 830 VETAVAKLIVGGQALEGSTIEVDADDRGIVVNVR 863
>gi|16331048|ref|NP_441776.1| ClpB protein [Synechocystis sp. PCC 6803]
gi|383322790|ref|YP_005383643.1| ClpB protein [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383325959|ref|YP_005386812.1| ClpB protein [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383491843|ref|YP_005409519.1| ClpB protein [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384437111|ref|YP_005651835.1| ClpB protein [Synechocystis sp. PCC 6803]
gi|451815205|ref|YP_007451657.1| ClpB protein [Synechocystis sp. PCC 6803]
gi|2493734|sp|P74361.1|CLPB2_SYNY3 RecName: Full=Chaperone protein ClpB 2
gi|1653543|dbj|BAA18456.1| ClpB protein [Synechocystis sp. PCC 6803]
gi|339274143|dbj|BAK50630.1| ClpB protein [Synechocystis sp. PCC 6803]
gi|359272109|dbj|BAL29628.1| ClpB protein [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359275279|dbj|BAL32797.1| ClpB protein [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359278449|dbj|BAL35966.1| ClpB protein [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407961585|dbj|BAM54825.1| ClpB protein [Bacillus subtilis BEST7613]
gi|451781174|gb|AGF52143.1| ClpB protein [Synechocystis sp. PCC 6803]
Length = 872
Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 149/268 (55%), Positives = 191/268 (71%), Gaps = 6/268 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRP +SF+F GPTGVGKTELA ALA F ++EA+VRIDMSEYMEKH
Sbjct: 589 AIQRSRAGLSDPNRPTASFIFLGPTGVGKTELAKALAKNLFDTEEALVRIDMSEYMEKHA 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEA+R RP+SVILFDEIEKAH DV NVMLQ+LDDGR+TD
Sbjct: 649 VSRLMGAPPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHGDVFNVMLQILDDGRLTDA 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD----QMERGVAEELRRRFRPEFLNRIDE 177
+G VD KNTIIIMTSN+G I + G D +M V + +R FRPEFLNR+DE
Sbjct: 709 QGHVVDFKNTIIIMTSNLGSQYIL--DVAGDDSRYEEMRSRVMDVMRENFRPEFLNRVDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
I+F L K +L IV I ++ + RLE + + L +T L GY+P YGARPL+R
Sbjct: 767 TIIFHGLQKSELRSIVQIQIQSLATRLEEQKLTLKLTDKALDFLAAVGYDPVYGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMD 265
A+ + LE +A+ IL G + G+++ +D
Sbjct: 827 AVQKYLETAIAKGILRGDYKPGETIVVD 854
>gi|385787426|ref|YP_005818535.1| protein disaggregation chaperone [Erwinia sp. Ejp617]
gi|310766698|gb|ADP11648.1| protein disaggregation chaperone [Erwinia sp. Ejp617]
Length = 857
Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 149/278 (53%), Positives = 199/278 (71%), Gaps = 4/278 (1%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F S +AMVRIDMSE+MEKH+
Sbjct: 583 AIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA-RESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT++IMTSN+G +I R L +M+ V + + FRPEF+NRIDE++V
Sbjct: 703 QGRTVDFRNTVVIMTSNLGSDLIQERFGALSYGEMKELVMSVVSQNFRPEFINRIDELVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L + + I I L+ +Y+RLE + L V+ + L E GY+P YGARPL+RAI
Sbjct: 763 FHPLGERHIASIARIQLQRLYQRLEERGFTLHVSDAALQLLGENGYDPVYGARPLKRAIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHR 278
+ +E+ LA+ IL+G + G ++ MD G I++ H+
Sbjct: 823 QQIENPLAQQILSGALVPGKTIEMDVKDG---IIFAHQ 857
>gi|402299365|ref|ZP_10818976.1| class III stress response-related ATPase [Bacillus alcalophilus
ATCC 27647]
gi|401725403|gb|EJS98688.1| class III stress response-related ATPase [Bacillus alcalophilus
ATCC 27647]
Length = 813
Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 147/271 (54%), Positives = 191/271 (70%), Gaps = 9/271 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA A+A FG +++++RIDMSEYMEKH S+
Sbjct: 528 RARAGLKDPKRPIGSFIFLGPTGVGKTELARAVAETLFGDEDSVIRIDMSEYMEKHATSR 587
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPGYVG E GGQLTE VR +P+SVIL DEIEKAH +V N++LQ+L+DGR+TD KG+
Sbjct: 588 LVGSPPGYVGHEEGGQLTEKVRRKPYSVILLDEIEKAHPEVFNILLQVLEDGRLTDSKGR 647
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFLNRI 175
TVD +NT IIMTSN+G S + R LG M+ V EL+R FRPEFLNRI
Sbjct: 648 TVDFRNTAIIMTSNVGASALKRNKYLGFAIESEGQEYKDMKDKVMGELKRSFRPEFLNRI 707
Query: 176 DEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPL 235
DE+IVF L K + EI ++M +++ +RL + +EL +T K+ + GY+P YGARPL
Sbjct: 708 DEIIVFHSLEKKHVREITNLMAEQLKKRLYEQGIELELTEKALDKITDIGYDPEYGARPL 767
Query: 236 RRAIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
RRA+ + +ED L+E +L G I G +D
Sbjct: 768 RRALQKQVEDRLSEELLKGTISKGQKAVIDV 798
>gi|297530994|ref|YP_003672269.1| ATP-dependent chaperone ClpB [Geobacillus sp. C56-T3]
gi|297254246|gb|ADI27692.1| ATP-dependent chaperone ClpB [Geobacillus sp. C56-T3]
Length = 864
Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 145/270 (53%), Positives = 201/270 (74%), Gaps = 1/270 (0%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DPNRPI SFLF GPTGVGKTELA ALA F S+E ++R+DMSEYMEKH VS+
Sbjct: 588 RARAGMKDPNRPIGSFLFLGPTGVGKTELAKALAEALFDSEEQLIRLDMSEYMEKHAVSR 647
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E GGQLTEAVR +P+SV+LFDEIEKAH +V N++LQLLDDGR+TD +G+
Sbjct: 648 LIGAPPGYVGYEEGGQLTEAVRRKPYSVLLFDEIEKAHPEVFNILLQLLDDGRLTDSQGR 707
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSDQMERG-VAEELRRRFRPEFLNRIDEVIVFRQ 183
TVD KNT++IMTSNIG ++ D+ R V ++LR FRPEFLNRID++++F+
Sbjct: 708 TVDFKNTVVIMTSNIGSPLLLENKQGDIDEETRKQVFDQLRAHFRPEFLNRIDDIVLFKP 767
Query: 184 LNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGRLL 243
L+ ++ IV+ +E+ RL +++EL +T K+ + E G++P YGARPL+R + + +
Sbjct: 768 LSMNEVKGIVEKFARELSARLADRHIELVLTEAAKQYIAEAGFDPVYGARPLKRFMQKQI 827
Query: 244 EDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
E LA+ ++ G ++ +VT+D D+G VI
Sbjct: 828 ETPLAKELIAGRVKDYSTVTVDVDNGQIVI 857
>gi|238785830|ref|ZP_04629799.1| Chaperone protein clpB 1 [Yersinia bercovieri ATCC 43970]
gi|238713243|gb|EEQ05286.1| Chaperone protein clpB 1 [Yersinia bercovieri ATCC 43970]
Length = 857
Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 148/269 (55%), Positives = 197/269 (73%), Gaps = 1/269 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F S +AMVRIDMSE+MEKH+
Sbjct: 583 AIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALATFLFDSDDAMVRIDMSEFMEKHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA-RESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT++IMTSN+G +I R +M+ V E + FRPEF+NRIDEV+V
Sbjct: 703 QGRTVDFRNTVVIMTSNLGSDLIQERFGERSYAEMKNMVMEVVSHHFRPEFINRIDEVVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L + L I I L+ +Y+RLE + ++T+T + L E G++P YGARPL+RAI
Sbjct: 763 FHPLGRAHLASIASIQLERLYKRLEERGYQVTITQPALEFLGEAGFDPVYGARPLKRAIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
+ +E+ L++ IL+G + G VT+D ++G
Sbjct: 823 QEIENPLSQQILSGKLIPGVPVTLDVENG 851
>gi|451817033|ref|YP_007453234.1| chaperone protein ClpB [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451783012|gb|AGF53980.1| chaperone protein ClpB [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 823
Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 145/272 (53%), Positives = 202/272 (74%), Gaps = 12/272 (4%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RARVGI+DPNRPI SF+F GPTGVGKTEL+ ALA FG + +++R+DMSEYME H+V++
Sbjct: 530 RARVGIKDPNRPIGSFIFLGPTGVGKTELSKALAEAMFGDENSIIRVDMSEYMESHSVAR 589
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPGYVG+E GGQLTEAVR +P+S++L DEIEKA+ +V N++LQ+++DGR+TDGKG+
Sbjct: 590 LIGSPPGYVGYEEGGQLTEAVRRKPYSIVLLDEIEKANPEVFNILLQIMEDGRLTDGKGK 649
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG------------SDQMERGVAEELRRRFRPEFL 172
V+ KNTIIIMTSN+G I ++ +G ++M+ + EL+++FRPEFL
Sbjct: 650 VVNFKNTIIIMTSNVGAHQIKKQKSIGFSSNSNNNEETEYEKMKENILGELKQKFRPEFL 709
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRID+ IVF +L+ L +I+D+ML I ERLE++++ L KK L+ +G + YGA
Sbjct: 710 NRIDDTIVFHKLSDDDLNQIIDLMLASIKERLESRDIYLNFEDNSKKFLLNKGIDLDYGA 769
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTM 264
RPLRR I + +ED L+E IL G I++GD V++
Sbjct: 770 RPLRRLIIKEVEDKLSEEILQGNIRIGDRVSV 801
>gi|365873802|ref|ZP_09413335.1| ATP-dependent chaperone ClpB [Thermanaerovibrio velox DSM 12556]
gi|363983889|gb|EHM10096.1| ATP-dependent chaperone ClpB [Thermanaerovibrio velox DSM 12556]
Length = 873
Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 148/273 (54%), Positives = 199/273 (72%), Gaps = 4/273 (1%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR GI+DP RPI SFLF GPTGVGKTELA ALA F S++ MVRIDMSEYMEKH+VS+
Sbjct: 594 RARAGIKDPRRPIGSFLFLGPTGVGKTELAKALAEALFDSEDNMVRIDMSEYMEKHSVSR 653
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E GGQLTE VR +P+SVILFDE+EKAH DV N +LQ+LDDGRVTD G+
Sbjct: 654 LIGAPPGYVGYEEGGQLTEQVRRKPYSVILFDEVEKAHPDVFNTLLQILDDGRVTDSHGK 713
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSD--QMERGVAEELRRRFRPEFLNRIDEVIVFR 182
TVD KN +II+TSN+G ++R + GSD + + +E+R FRPEF+NR+DE+IVF+
Sbjct: 714 TVDFKNCVIILTSNVGSQHLSRVTS-GSDFEEAAKKALDEVRALFRPEFINRLDEIIVFK 772
Query: 183 QLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGRL 242
L K ++ IV +++ ++ ERL+ +N+ + + + +EGY+P YGARPL+RAI R+
Sbjct: 773 PLTKDEVRTIVSMLISKVAERLKDRNISVEASEKAMDLIAQEGYDPIYGARPLKRAIQRM 832
Query: 243 LEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMY 275
+E LA+ IL G ++ G +D G ++ Y
Sbjct: 833 IETPLAKAILKGELKEGGWTRIDV-QGKDLSFY 864
>gi|428773610|ref|YP_007165398.1| ATP-dependent chaperone ClpB [Cyanobacterium stanieri PCC 7202]
gi|428687889|gb|AFZ47749.1| ATP-dependent chaperone ClpB [Cyanobacterium stanieri PCC 7202]
Length = 863
Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 149/270 (55%), Positives = 194/270 (71%), Gaps = 6/270 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DP+RP +SF+F GPTGVGKTELA ALA F +++A+VRIDMSEYMEKHT
Sbjct: 589 AIQRSRAGLADPHRPTASFIFLGPTGVGKTELAKALAQILFDTEDAIVRIDMSEYMEKHT 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEA+R RP+SV+LFDEIEKAH DV NVMLQ+LDDGR+TD
Sbjct: 649 VSRLMGAPPGYVGYEEGGQLTEAIRRRPYSVVLFDEIEKAHPDVFNVMLQILDDGRLTDS 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQ----MERGVAEELRRRFRPEFLNRIDE 177
+G+TVD KNTIIIMTSNIG I + G D M V + +R FRPEFLNRIDE
Sbjct: 709 QGRTVDFKNTIIIMTSNIGSQYIL--DLAGDDAQYETMRTRVMDAMRDNFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
+I+F L K QL IV++ + + ERL + + L + L + GY+P YGARPL+R
Sbjct: 767 IIIFHSLKKSQLRHIVNLQVNRLRERLAEQKLALDIADEALDFLADIGYDPVYGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
A+ R LE +A+ IL G + G+++ + +
Sbjct: 827 AVQRYLETAIAKAILKGEFKDGETINVTVE 856
>gi|302385738|ref|YP_003821560.1| ATPase AAA-2 domain-containing protein [Clostridium saccharolyticum
WM1]
gi|302196366|gb|ADL03937.1| ATPase AAA-2 domain protein [Clostridium saccharolyticum WM1]
Length = 816
Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 151/280 (53%), Positives = 198/280 (70%), Gaps = 11/280 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R RVG++DP RPI SFLF GPTGVGKTEL+ AL+ FG++ A++R+DMSEYMEKH+
Sbjct: 527 AIRRGRVGLKDPKRPIGSFLFLGPTGVGKTELSKALSEAMFGTEHALIRVDMSEYMEKHS 586
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGY+G++ GGQL+E VR P+SVILFDEIEKAH DV N++LQ+LDDG +TD
Sbjct: 587 VSKMIGSPPGYIGYDEGGQLSEKVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDA 646
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----SDQ------MERGVAEELRRRFRPEF 171
+G+ +D KNT+IIMTSN G I LG +D+ M+ V EE++R F+PEF
Sbjct: 647 QGRKIDFKNTVIIMTSNAGAENIISPKRLGFGAVADEKADYKIMKDRVMEEVKRLFKPEF 706
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERL-EAKNMELTVTHTFKKKLIEEGYNPSY 230
+NRIDE+IVF LNK + +IV IM+K+I +R E ++ L + K+ LI +GY+ Y
Sbjct: 707 INRIDEIIVFHPLNKTHMKDIVTIMMKDIMKRTREQMSITLEIGEDAKEYLINKGYDEKY 766
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGG 270
GARPLRR I LED LAE IL G ++ GD V + + G
Sbjct: 767 GARPLRRTIQNCLEDKLAEEILNGTVKTGDEVAVTAGAEG 806
>gi|261419034|ref|YP_003252716.1| ATP-dependent chaperone ClpB [Geobacillus sp. Y412MC61]
gi|319765851|ref|YP_004131352.1| ATP-dependent chaperone ClpB [Geobacillus sp. Y412MC52]
gi|261375491|gb|ACX78234.1| ATP-dependent chaperone ClpB [Geobacillus sp. Y412MC61]
gi|317110717|gb|ADU93209.1| ATP-dependent chaperone ClpB [Geobacillus sp. Y412MC52]
Length = 864
Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 145/271 (53%), Positives = 204/271 (75%), Gaps = 3/271 (1%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DPNRPI SFLF GPTGVGKTELA ALA F S+E ++R+DMSEYMEKH VS+
Sbjct: 588 RARAGMKDPNRPIGSFLFLGPTGVGKTELAKALAEALFDSEEQLIRLDMSEYMEKHAVSR 647
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E GGQLTEAVR +P+SV+LFDEIEKAH +V N++LQLLDDGR+TD +G+
Sbjct: 648 LIGAPPGYVGYEEGGQLTEAVRRKPYSVLLFDEIEKAHPEVFNILLQLLDDGRLTDSQGR 707
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG--SDQMERGVAEELRRRFRPEFLNRIDEVIVFR 182
TVD KNT++IMTSNIG ++ E+ G ++ + V ++LR FRPEFLNRID++++F+
Sbjct: 708 TVDFKNTVVIMTSNIGSPLLL-ENKQGDIDEETHKQVFDQLRAHFRPEFLNRIDDIVLFK 766
Query: 183 QLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGRL 242
L+ ++ IV+ +E+ RL +++EL +T K+ + E G++P YGARPL+R + +
Sbjct: 767 PLSMNEVKGIVEKFARELSARLADRHIELVLTEAAKQYIAEAGFDPVYGARPLKRFMQKQ 826
Query: 243 LEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
+E LA+ ++ G ++ +VT+D D+G VI
Sbjct: 827 IETPLAKELIAGRVKDYSTVTVDVDNGQIVI 857
>gi|423204378|ref|ZP_17190934.1| chaperone ClpB [Aeromonas veronii AMC34]
gi|404627243|gb|EKB24048.1| chaperone ClpB [Aeromonas veronii AMC34]
Length = 857
Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 146/270 (54%), Positives = 196/270 (72%), Gaps = 1/270 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F +++AMVRIDMSE+MEKH+
Sbjct: 583 AIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALAEFLFDTQDAMVRIDMSEFMEKHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA-RESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT++IMTSN+G +I S D+M+ + + L R FRPEF+NRIDE +V
Sbjct: 703 QGRTVDFRNTVVIMTSNLGSDLIQEHHSEKDYDEMKAMLMDVLTRSFRPEFINRIDETVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L + + I I LK + RLEA+ E+ V+ +KL+ G++P YGARPL+RAI
Sbjct: 763 FHPLGEEHIKSIARIQLKSLMGRLEAQGYEVEVSEALLEKLVHAGFDPVYGARPLKRAIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSGG 270
+ +E+ LA+ +L+G I G + + DS G
Sbjct: 823 QKVENPLAQALLSGRIVPGKKLVLGADSNG 852
>gi|442803766|ref|YP_007371915.1| chaperone protein ClpB [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442739616|gb|AGC67305.1| chaperone protein ClpB [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 810
Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 148/274 (54%), Positives = 194/274 (70%), Gaps = 11/274 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R RVG++DP RP+ SF+F GPTGVGKTEL+ ALA FG + M+R+DMSEYMEKHT
Sbjct: 525 AIRRGRVGLKDPKRPVGSFIFLGPTGVGKTELSKALAEALFGDESHMIRLDMSEYMEKHT 584
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ GSPPGYVG+E GGQLTE VR +P+SV+LFDEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 585 VSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLFDEIEKAHPDVFNILLQILDDGRLTDA 644
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG-----------SDQMERGVAEELRRRFRPE 170
G+ VD +NT+IIMTSNIG I LG ++M++ V EL++ FRPE
Sbjct: 645 SGRLVDFRNTVIIMTSNIGARDIVEPRKLGFSAALENEAKDYEEMKKNVMNELKKTFRPE 704
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNR+DE+IVF L + + +I +ML E+ +RL+ N+ L K+ L E+GY+ Y
Sbjct: 705 FLNRVDELIVFHPLTRENINDIAGLMLNEVAKRLKNVNITLIADDQVKEFLAEKGYDKVY 764
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTM 264
GARPLRR I L+ED +AE +L G I+ GD+V +
Sbjct: 765 GARPLRRTIQNLVEDRIAEEMLDGKIREGDTVKI 798
>gi|182420087|ref|ZP_02951321.1| negative regulator of genetic competence ClpC/mecB [Clostridium
butyricum 5521]
gi|237666342|ref|ZP_04526327.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium butyricum E4 str. BoNT E BL5262]
gi|182376124|gb|EDT73711.1| negative regulator of genetic competence ClpC/mecB [Clostridium
butyricum 5521]
gi|237657541|gb|EEP55096.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium butyricum E4 str. BoNT E BL5262]
Length = 814
Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 145/270 (53%), Positives = 201/270 (74%), Gaps = 10/270 (3%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RARVGI+DPNRPI SF+F GPTGVGKTEL+ ALA FG + +++R+DMSEYME H+V+K
Sbjct: 532 RARVGIKDPNRPIGSFIFLGPTGVGKTELSKALAEAMFGDENSIIRVDMSEYMESHSVAK 591
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGY+G E+GGQLTEAVR +P+S++L DEIEKAH+D+ N++LQ+++DGR+TDGKG+
Sbjct: 592 LIGAPPGYIGHEDGGQLTEAVRRKPYSIVLLDEIEKAHQDIFNILLQIMEDGRLTDGKGK 651
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG--------SD--QMERGVAEELRRRFRPEFLNR 174
V+ KNTIIIMTSN+G I ++ +G SD +M+ + EL+++F+PEFLNR
Sbjct: 652 VVNFKNTIIIMTSNVGAHQIKKQKTIGFNSAQNEESDYEKMKENILGELKKQFKPEFLNR 711
Query: 175 IDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARP 234
ID+ IVF +LN L +I+D+MLK I +RLE + + L K+ L+ +G + GARP
Sbjct: 712 IDDTIVFHKLNDQDLDKIMDLMLKSIKDRLEHREIYLNFEDNSKEFLLNKGIDLENGARP 771
Query: 235 LRRAIGRLLEDNLAEIILTGYIQVGDSVTM 264
LRR + + +ED L+E IL G IQ+GD V +
Sbjct: 772 LRRILIKEVEDRLSEEILQGNIQIGDKVKV 801
>gi|291548302|emb|CBL21410.1| ATP-dependent chaperone ClpB [Ruminococcus sp. SR1/5]
Length = 860
Score = 304 bits (778), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 145/271 (53%), Positives = 197/271 (72%), Gaps = 7/271 (2%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
R++ GI+DP +PI SFLF GPTGVGKTELA LA F ++ MVRIDMSEYMEK++VS+
Sbjct: 586 RSKAGIKDPTKPIGSFLFLGPTGVGKTELAKTLAATLFDDEQNMVRIDMSEYMEKYSVSR 645
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E GGQLTEAVR +P+SV+LFDEIEKAH DV NV+LQ+LDDGR+TD +G+
Sbjct: 646 LIGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRITDSQGR 705
Query: 125 TVDLKNTIIIMTSNIG-----DSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVI 179
TVD KNTI+IMTSNIG D + + I + + V +LR FRPEFLNR+DE+I
Sbjct: 706 TVDFKNTILIMTSNIGSPYLLDGIDEKGDI--KPEAQEQVMNDLRGHFRPEFLNRLDEII 763
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
+F+ L K + +IVD+M+KE+ +RL + + L +T K+ +++ GY+P YGARPL+R +
Sbjct: 764 MFKPLTKDNVGKIVDLMVKELSDRLADQELSLELTDAAKQMVVDNGYDPVYGARPLKRYL 823
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGG 270
+E A+ IL+G + GD++ +D G
Sbjct: 824 QNYVETLTAKKILSGDVHAGDTIVLDVKDGA 854
>gi|153812816|ref|ZP_01965484.1| hypothetical protein RUMOBE_03223 [Ruminococcus obeum ATCC 29174]
gi|149831028|gb|EDM86117.1| ATP-dependent chaperone protein ClpB [Ruminococcus obeum ATCC
29174]
Length = 860
Score = 304 bits (778), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 147/272 (54%), Positives = 197/272 (72%), Gaps = 3/272 (1%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
R++ GI+DP +PI SFLF GPTGVGKTELA LA F ++ MVRIDMSEYMEK++VS+
Sbjct: 586 RSKAGIKDPTKPIGSFLFLGPTGVGKTELAKTLAATLFDDEQNMVRIDMSEYMEKYSVSR 645
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E GGQLTEAVR +P+SV+LFDEIEKAH DV NV+LQ+LDDGR+TD +G+
Sbjct: 646 LIGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRITDSQGR 705
Query: 125 TVDLKNTIIIMTSNIGDSVIAR---ESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVF 181
TVD KNTI+IMTSNIG + E+ + + V +LR FRPEFLNR+DE+I+F
Sbjct: 706 TVDFKNTILIMTSNIGSPYLLEGIDENGEIKPEAQEQVMNDLRGHFRPEFLNRLDEIILF 765
Query: 182 RQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGR 241
+ L K + IVD+M+KE+ +RL + + L +T + ++IE GY+P YGARPL+R +
Sbjct: 766 KPLTKDNIGGIVDLMVKELSDRLADQELSLELTDAARTQVIENGYDPVYGARPLKRYLQN 825
Query: 242 LLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
+E A+ IL+G + GD++ +D G VI
Sbjct: 826 YVETLAAKKILSGDVHAGDTLVLDVKDGEFVI 857
>gi|425439209|ref|ZP_18819540.1| Chaperone [Microcystis aeruginosa PCC 9717]
gi|389714881|emb|CCI00598.1| Chaperone [Microcystis aeruginosa PCC 9717]
Length = 872
Score = 304 bits (778), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 149/269 (55%), Positives = 192/269 (71%), Gaps = 6/269 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRP +SF+F GPTGVGKTELA ALA F ++EA+VRIDMSEYMEKH+
Sbjct: 589 AIQRSRAGLSDPNRPTASFIFLGPTGVGKTELAKALARNLFDTEEALVRIDMSEYMEKHS 648
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GGQLTEA+R RP+SVILFDEIEKAH DV NVMLQ+LDDGR+TD
Sbjct: 649 VSRLMGAPPGYVGYDEGGQLTEAIRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRLTDS 708
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS----DQMERGVAEELRRRFRPEFLNRIDE 177
+G VD KNTIIIMTSNIG I + G ++M+ V E +R FRPEFLNRIDE
Sbjct: 709 QGHLVDFKNTIIIMTSNIGSQYIL--DVAGDESRYEEMQARVMEAMRNSFRPEFLNRIDE 766
Query: 178 VIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRR 237
I+F L K QL IV + + + +RL + + L + L E G++P YGARPL+R
Sbjct: 767 TIIFHSLQKAQLRSIVKLQVANLSDRLMEQKLALKLADIALDYLAEIGHDPVYGARPLKR 826
Query: 238 AIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
A+ R +E +A+ IL G + GD++ +D
Sbjct: 827 AVQRYVETPIAKAILRGEFKGGDTIFVDV 855
>gi|422808348|ref|ZP_16856759.1| negative regulator of genetic competence ClpC/mecB [Listeria
monocytogenes FSL J1-208]
gi|378753382|gb|EHY63966.1| negative regulator of genetic competence ClpC/mecB [Listeria
monocytogenes FSL J1-208]
Length = 820
Score = 304 bits (778), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 143/278 (51%), Positives = 200/278 (71%), Gaps = 9/278 (3%)
Query: 1 MTLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKH 60
+ + RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +++M+RIDMSEYMEK
Sbjct: 521 LAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDEDSMIRIDMSEYMEKF 580
Query: 61 TVSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTD 120
+ ++ G+PPGYVG+E GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 581 STARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEIEKAHPDVFNMLLQVLDDGRLTD 640
Query: 121 GKGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEF 171
KG+ VD +NT+IIMTSNIG + ++ +G ME V ++L++ FRPEF
Sbjct: 641 SKGRVVDFRNTVIIMTSNIGAQEMKQDKSMGFNVIDPLKDHKAMEHRVLQDLKQAFRPEF 700
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
+NRIDE IVF L + +L +IV ++ ++ +RL +++ + +T K K+ ++GY+P YG
Sbjct: 701 INRIDETIVFHSLQEKELKQIVTLLTSQLTKRLAERDIHVKLTEGAKAKIAKDGYDPEYG 760
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
ARPL+RAI + +ED L+E +L G I+VGD V + G
Sbjct: 761 ARPLKRAIQKEVEDMLSEELLRGNIKVGDYVEIGVKDG 798
>gi|297172680|gb|ADI23647.1| hypothetical protein [uncultured Gemmatimonadales bacterium
HF4000_15H13]
Length = 826
Score = 304 bits (778), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 147/291 (50%), Positives = 203/291 (69%), Gaps = 9/291 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G++DP RPI SF+F+GPTGVGKTELA ALA F ++A++R+DMSEYMEK +
Sbjct: 536 AIRRSRAGLKDPRRPIGSFIFSGPTGVGKTELARALAEFLFADRDALIRVDMSEYMEKFS 595
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E+ G LT+AVR RP+SV+L DEIEKAH DV N++LQ+LD+G +TD
Sbjct: 596 VSRLIGAPPGYVGYEDSGALTKAVRRRPYSVVLLDEIEKAHPDVFNILLQVLDEGHLTDN 655
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
G+ +D KNT++IMTSN+G IA+ LG D M+ V +E+ R F PEFL
Sbjct: 656 YGRVIDFKNTVLIMTSNLGAREIAKGGGLGFQSADPTKSYDVMQDKVRQEIERAFNPEFL 715
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NR+D+ IVF L+K ++ EIV I+L E+ ERL ++M LT+T + L++EGY+ +GA
Sbjct: 716 NRVDDTIVFHPLSKDEIAEIVHILLAEMRERLSEEDMTLTITDAAVELLVDEGYDEKFGA 775
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMT 283
RPL+RAI + LED L+E ILT GD + +D D G + R + + T
Sbjct: 776 RPLKRAIQKFLEDPLSEKILTAEFTAGDEIEVDADPDGGSLTLRVESTTKT 826
>gi|254853501|ref|ZP_05242849.1| ClpC ATPase [Listeria monocytogenes FSL R2-503]
gi|258606873|gb|EEW19481.1| ClpC ATPase [Listeria monocytogenes FSL R2-503]
Length = 821
Score = 304 bits (778), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 143/278 (51%), Positives = 200/278 (71%), Gaps = 9/278 (3%)
Query: 1 MTLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKH 60
+ + RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +++M+RIDMSEYMEK
Sbjct: 521 LAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDEDSMIRIDMSEYMEKF 580
Query: 61 TVSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTD 120
+ ++ G+PPGYVG+E GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 581 STARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEIEKAHPDVFNMLLQVLDDGRLTD 640
Query: 121 GKGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEF 171
KG+ VD +NT+IIMTSNIG + ++ +G ME V ++L++ FRPEF
Sbjct: 641 SKGRVVDFRNTVIIMTSNIGAQEMKQDKSMGFNVIDPLKDHKAMEHRVLQDLKQAFRPEF 700
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
+NRIDE IVF L + +L +IV ++ ++ +RL +++ + +T K K+ ++GY+P YG
Sbjct: 701 INRIDETIVFHSLQEKELKQIVTLLTAQLTKRLAERDIHVKLTEGAKSKIAKDGYDPEYG 760
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
ARPL+RAI + +ED L+E +L G I+VGD V + G
Sbjct: 761 ARPLKRAIQKEVEDMLSEELLRGNIKVGDYVEIGVKDG 798
>gi|46906465|ref|YP_012854.1| ClpC ATPase [Listeria monocytogenes serotype 4b str. F2365]
gi|47093952|ref|ZP_00231688.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes str. 4b H7858]
gi|226222861|ref|YP_002756968.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|254825724|ref|ZP_05230725.1| ClpC ATPase [Listeria monocytogenes FSL J1-194]
gi|254932450|ref|ZP_05265809.1| ClpC ATPase [Listeria monocytogenes HPB2262]
gi|300764643|ref|ZP_07074635.1| ClpC ATPase [Listeria monocytogenes FSL N1-017]
gi|386730997|ref|YP_006204493.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
07PF0776]
gi|404279782|ref|YP_006680680.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2755]
gi|404285599|ref|YP_006692185.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes serotype 7 str. SLCC2482]
gi|405748575|ref|YP_006672041.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes ATCC 19117]
gi|405751449|ref|YP_006674914.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2378]
gi|405754317|ref|YP_006677781.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2540]
gi|406703005|ref|YP_006753359.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes L312]
gi|417314282|ref|ZP_12100983.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
J1816]
gi|424713097|ref|YP_007013812.1| Negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes serotype 4b str. LL195]
gi|424821963|ref|ZP_18246976.1| Chaperone protein ClpB [Listeria monocytogenes str. Scott A]
gi|46879729|gb|AAT03031.1| ClpC ATPase [Listeria monocytogenes serotype 4b str. F2365]
gi|47017673|gb|EAL08470.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes str. 4b H7858]
gi|225875323|emb|CAS04020.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|293584007|gb|EFF96039.1| ClpC ATPase [Listeria monocytogenes HPB2262]
gi|293594968|gb|EFG02729.1| ClpC ATPase [Listeria monocytogenes FSL J1-194]
gi|300514750|gb|EFK41805.1| ClpC ATPase [Listeria monocytogenes FSL N1-017]
gi|328467843|gb|EGF38883.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
J1816]
gi|332310643|gb|EGJ23738.1| Chaperone protein ClpB [Listeria monocytogenes str. Scott A]
gi|384389755|gb|AFH78825.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
07PF0776]
gi|404217775|emb|CBY69139.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes ATCC 19117]
gi|404220649|emb|CBY72012.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2378]
gi|404223517|emb|CBY74879.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2540]
gi|404226417|emb|CBY47822.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2755]
gi|404244528|emb|CBY02753.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes serotype 7 str. SLCC2482]
gi|406360035|emb|CBY66308.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes L312]
gi|424012281|emb|CCO62821.1| Negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes serotype 4b str. LL195]
Length = 820
Score = 304 bits (778), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 143/278 (51%), Positives = 200/278 (71%), Gaps = 9/278 (3%)
Query: 1 MTLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKH 60
+ + RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +++M+RIDMSEYMEK
Sbjct: 521 LAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDEDSMIRIDMSEYMEKF 580
Query: 61 TVSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTD 120
+ ++ G+PPGYVG+E GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 581 STARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEIEKAHPDVFNMLLQVLDDGRLTD 640
Query: 121 GKGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEF 171
KG+ VD +NT+IIMTSNIG + ++ +G ME V ++L++ FRPEF
Sbjct: 641 SKGRVVDFRNTVIIMTSNIGAQEMKQDKSMGFNVIDPLKDHKAMEHRVLQDLKQAFRPEF 700
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
+NRIDE IVF L + +L +IV ++ ++ +RL +++ + +T K K+ ++GY+P YG
Sbjct: 701 INRIDETIVFHSLQEKELKQIVTLLTAQLTKRLAERDIHVKLTEGAKSKIAKDGYDPEYG 760
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
ARPL+RAI + +ED L+E +L G I+VGD V + G
Sbjct: 761 ARPLKRAIQKEVEDMLSEELLRGNIKVGDYVEIGVKDG 798
>gi|16802278|ref|NP_463763.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
EGD-e]
gi|47097423|ref|ZP_00234971.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes str. 1/2a F6854]
gi|254828692|ref|ZP_05233379.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes FSL
N3-165]
gi|254913462|ref|ZP_05263474.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
J2818]
gi|254937957|ref|ZP_05269654.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes
F6900]
gi|284800527|ref|YP_003412392.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
08-5578]
gi|284993713|ref|YP_003415481.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
08-5923]
gi|386042568|ref|YP_005961373.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Listeria
monocytogenes 10403S]
gi|386045869|ref|YP_005964201.1| Clp protease ATP binding subunit [Listeria monocytogenes J0161]
gi|386049161|ref|YP_005967152.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes FSL
R2-561]
gi|386052509|ref|YP_005970067.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes
Finland 1998]
gi|404282664|ref|YP_006683561.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2372]
gi|404409465|ref|YP_006695053.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC5850]
gi|404412333|ref|YP_006697920.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC7179]
gi|405757220|ref|YP_006686496.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2479]
gi|16409597|emb|CAD00759.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
EGD-e]
gi|47014200|gb|EAL05185.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes str. 1/2a F6854]
gi|258601096|gb|EEW14421.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes FSL
N3-165]
gi|258610567|gb|EEW23175.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes
F6900]
gi|284056089|gb|ADB67030.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
08-5578]
gi|284059180|gb|ADB70119.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
08-5923]
gi|293591469|gb|EFF99803.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
J2818]
gi|345532860|gb|AEO02301.1| Clp protease ATP binding subunit [Listeria monocytogenes J0161]
gi|345535802|gb|AEO05242.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Listeria
monocytogenes 10403S]
gi|346423007|gb|AEO24532.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes FSL
R2-561]
gi|346645160|gb|AEO37785.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes
Finland 1998]
gi|404229291|emb|CBY50695.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC5850]
gi|404232166|emb|CBY53569.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2372]
gi|404235102|emb|CBY56504.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2479]
gi|404238032|emb|CBY59433.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC7179]
gi|441469781|emb|CCQ19536.1| Negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes]
gi|441472917|emb|CCQ22671.1| Negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes N53-1]
Length = 820
Score = 304 bits (778), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 143/278 (51%), Positives = 200/278 (71%), Gaps = 9/278 (3%)
Query: 1 MTLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKH 60
+ + RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +++M+RIDMSEYMEK
Sbjct: 521 LAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDEDSMIRIDMSEYMEKF 580
Query: 61 TVSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTD 120
+ ++ G+PPGYVG+E GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 581 STARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEIEKAHPDVFNMLLQVLDDGRLTD 640
Query: 121 GKGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEF 171
KG+ VD +NT+IIMTSNIG + ++ +G ME V ++L++ FRPEF
Sbjct: 641 SKGRVVDFRNTVIIMTSNIGAQEMKQDKSMGFNVTDPLKDHKAMEHRVLQDLKQAFRPEF 700
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
+NRIDE IVF L + +L +IV ++ ++ +RL +++ + +T K K+ ++GY+P YG
Sbjct: 701 INRIDETIVFHSLQEKELKQIVTLLTAQLTKRLAERDIHVKLTEGAKSKIAKDGYDPEYG 760
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
ARPL+RAI + +ED L+E +L G I+VGD V + G
Sbjct: 761 ARPLKRAIQKEVEDMLSEELLRGNIKVGDYVEIGVKDG 798
>gi|158425824|ref|YP_001527116.1| ATPase AAA [Azorhizobium caulinodans ORS 571]
gi|158332713|dbj|BAF90198.1| AAA ATPase [Azorhizobium caulinodans ORS 571]
Length = 879
Score = 304 bits (778), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 147/282 (52%), Positives = 202/282 (71%), Gaps = 14/282 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DPNRPI SFLF GPTGVGKTEL ALA F + AMVR+DMSEYMEKH+
Sbjct: 583 AVRRARAGLQDPNRPIGSFLFIGPTGVGKTELTKALASFLFDDETAMVRLDMSEYMEKHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GG LTEAVR RP+ V+LFDE+EKAH+DV NV+LQ+LDDGR+TDG
Sbjct: 643 VSRLIGAPPGYVGYEEGGALTEAVRRRPYQVVLFDEVEKAHQDVFNVLLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR--------------ESILGSDQMERGVAEELRRRF 167
+G+TVD +NT+IIMTSN+G +A E ++ ++ V + +RR F
Sbjct: 703 QGRTVDFRNTLIIMTSNLGAEYLADPRQPVGFGIPGHDGEKVVSDEEAYELVMQAVRRHF 762
Query: 168 RPEFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYN 227
RPEF+NRIDE+++F +L K Q+ IV+I LK + + LE + + L +T + L ++GY+
Sbjct: 763 RPEFINRIDEIVMFHRLRKDQMGGIVEIQLKRLAKLLEDRKITLDLTPEARAFLADKGYD 822
Query: 228 PSYGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
P+YGARPL+R I +L++D LA+ IL+G + G V + ++G
Sbjct: 823 PAYGARPLKRTIQKLVQDPLAQQILSGEVLDGSRVHIGLENG 864
>gi|308806005|ref|XP_003080314.1| AAA ATPase, central region:Clp, N terminal:C (ISS) [Ostreococcus
tauri]
gi|116058774|emb|CAL54481.1| AAA ATPase, central region:Clp, N terminal:C (ISS) [Ostreococcus
tauri]
Length = 839
Score = 304 bits (778), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 144/289 (49%), Positives = 199/289 (68%), Gaps = 8/289 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G+ D ++P++S +F+GPTGVGKTELA A+A YFG+++AMVRIDMSEYME H+
Sbjct: 508 AIRRARAGLADASKPVASIIFSGPTGVGKTELAKAVAQTYFGAEKAMVRIDMSEYMESHS 567
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G PPGY+GF GGQLTEAVR PHS++L DEIEKAH DV N++LQ+L+DGR+TD
Sbjct: 568 VSRLIGPPPGYIGFGEGGQLTEAVRTNPHSLVLLDEIEKAHPDVFNILLQVLEDGRLTDS 627
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGS-------DQMERGVAEELRRRFRPEFLNR 174
KG+TVD N +++MTSNIG I +S+ G ++ V EL R +RPEFLNR
Sbjct: 628 KGRTVDFTNAMLVMTSNIGSREIL-DSMTGEGDEEAKYKALQTKVKRELGREYRPEFLNR 686
Query: 175 IDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARP 234
+DE++VF+ L K ++ EI DIML + +R K + L + F+ L G++ +GARP
Sbjct: 687 LDEIVVFKPLQKTEVSEIADIMLNTVAKRAAGKGISLKFSPKFRSVLYANGFSTRFGARP 746
Query: 235 LRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMT 283
+RR + LLE+NLAE +L G+ GD+VT D D ++I +M+
Sbjct: 747 MRRCVRGLLENNLAECMLDGFASSGDTVTFDYDEDADIITVSTATSTMS 795
>gi|255528348|ref|ZP_05395154.1| ATP-dependent chaperone ClpB [Clostridium carboxidivorans P7]
gi|296185567|ref|ZP_06853976.1| ATP-dependent chaperone protein ClpB [Clostridium carboxidivorans
P7]
gi|255507958|gb|EET84392.1| ATP-dependent chaperone ClpB [Clostridium carboxidivorans P7]
gi|296049695|gb|EFG89120.1| ATP-dependent chaperone protein ClpB [Clostridium carboxidivorans
P7]
Length = 870
Score = 304 bits (778), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 146/264 (55%), Positives = 199/264 (75%), Gaps = 2/264 (0%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DP RPI SF+F GPTGVGKTELA LA F S+E +VRIDMSEYMEK++VS+
Sbjct: 592 RARAGMKDPKRPIGSFIFLGPTGVGKTELAKTLARTLFDSEENIVRIDMSEYMEKYSVSR 651
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E GGQLTEAVR P+SVILFDEIEKAH DV N+ LQ+LDDGR+TD +G+
Sbjct: 652 LIGAPPGYVGYEEGGQLTEAVRRNPYSVILFDEIEKAHDDVFNIFLQILDDGRLTDNQGK 711
Query: 125 TVDLKNTIIIMTSNIGDS-VIARESILGSDQMERG-VAEELRRRFRPEFLNRIDEVIVFR 182
+D KN IIIMTSNIG S ++ + I G +Q R V E++ RF+PEFLNR+D++I+F+
Sbjct: 712 VIDFKNCIIIMTSNIGSSYLLENKEISGVEQHIRDRVMSEMKSRFKPEFLNRLDDIILFK 771
Query: 183 QLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGRL 242
L+ ++ +I+ I +++I +RL+ KN+ L +T KK + EEGY+P YGARPL+R I +
Sbjct: 772 PLSTEEIKDIISIFIEDIRKRLKEKNISLKITEAAKKLMAEEGYDPVYGARPLKRYIENV 831
Query: 243 LEDNLAEIILTGYIQVGDSVTMDC 266
LE ++A+ I+ G + G ++ +D
Sbjct: 832 LETSIAKKIIKGDVYEGCTIGVDV 855
>gi|56419334|ref|YP_146652.1| ATP-dependent Clp protease ATP-binding subunit [Geobacillus
kaustophilus HTA426]
gi|56379176|dbj|BAD75084.1| ATP-dependent Clp protease ATP-binding subunit [Geobacillus
kaustophilus HTA426]
Length = 862
Score = 304 bits (778), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 144/270 (53%), Positives = 200/270 (74%), Gaps = 1/270 (0%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DPNRPI SFLF GPTGVGKTELA ALA F S+E ++R+DMSEYMEKH VS+
Sbjct: 589 RARAGMKDPNRPIGSFLFLGPTGVGKTELAKALAEALFDSEEQLIRLDMSEYMEKHAVSR 648
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E GGQLTEAVR +P+SV+LFDEIEKAH DV N++LQLLDDGR+TD G+
Sbjct: 649 LIGAPPGYVGYEEGGQLTEAVRRKPYSVLLFDEIEKAHSDVFNILLQLLDDGRLTDSHGR 708
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSDQMERG-VAEELRRRFRPEFLNRIDEVIVFRQ 183
TVD KNT++IMTSNIG ++ D+ R V ++LR FRPEFLNRID++++F+
Sbjct: 709 TVDFKNTVVIMTSNIGSPLLLEHKDDDIDEQTRSQVFDQLRAHFRPEFLNRIDDIVLFKP 768
Query: 184 LNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGRLL 243
L+ ++ I++ +E+ RL +++EL +T K+ + E G++P YGARPL+R + + +
Sbjct: 769 LSMNEVKGIIEKFARELSARLADRHIELVLTEAAKQYIAEAGFDPVYGARPLKRFMQKQI 828
Query: 244 EDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
E LA+ ++ G ++ +VT+D ++G VI
Sbjct: 829 ETPLAKELIAGRVKDYSTVTVDAENGRLVI 858
>gi|392529183|ref|ZP_10276320.1| class III stress response-like ATPase, AAA+ superfamily protein
[Carnobacterium maltaromaticum ATCC 35586]
Length = 830
Score = 304 bits (778), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 143/277 (51%), Positives = 198/277 (71%), Gaps = 9/277 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DPNRPI SF+F GPTGVGKTELA ALA FGS++A++R+DMSEYMEK++
Sbjct: 533 AMRRARSGLKDPNRPIGSFMFLGPTGVGKTELAKALAESMFGSEDALIRVDMSEYMEKYS 592
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG++ GGQLTE +R +P+SV+L DE+EKAH DV N++LQ+LDDG +TD
Sbjct: 593 TSRLIGSPPGYVGYDEGGQLTEKIRQKPYSVVLLDEVEKAHPDVFNILLQVLDDGHLTDA 652
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+ VD KNTI+IMTSN+G + + E +G ME+ + EEL+ FRPEF+
Sbjct: 653 KGRKVDFKNTILIMTSNLGATSLRDEKSVGFSTKDTKKDHKAMEKRILEELKNTFRPEFI 712
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE IVF L K +L EIV +M I +RL+ ++ + +T + + + G++P YGA
Sbjct: 713 NRIDETIVFHSLEKNELNEIVKLMAAIIVKRLKDLDIHVKITPAAIEVIAKAGFDPEYGA 772
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
RPLRRA+ + +ED L+E +L +++GD VT+ G
Sbjct: 773 RPLRRALQKEVEDRLSEELLNKTVKIGDHVTIGAAKG 809
>gi|312115440|ref|YP_004013036.1| ATP-dependent chaperone ClpB [Rhodomicrobium vannielii ATCC 17100]
gi|311220569|gb|ADP71937.1| ATP-dependent chaperone ClpB [Rhodomicrobium vannielii ATCC 17100]
Length = 866
Score = 304 bits (778), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 148/276 (53%), Positives = 198/276 (71%), Gaps = 1/276 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DPNRPI SF+F GPTGVGKTEL+ ALA F + AMVRIDMSEYMEKH+
Sbjct: 585 AVRRARAGLQDPNRPIGSFMFLGPTGVGKTELSRALAAFLFDDESAMVRIDMSEYMEKHS 644
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG+E GG LTEAVR RP+ V+LFDEIEKAH DV NV+LQ+LDDGR+TDG
Sbjct: 645 VARLIGAPPGYVGYEEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDG 704
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMERG-VAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NTIIIMTSN+G + + S+ R V +R FRPEFLNRID++++
Sbjct: 705 QGRTVDFRNTIIIMTSNLGSEYLVNQPEGESEAEVRAQVMAVVRSHFRPEFLNRIDDILL 764
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F +L + ++ IVDI LK + + L+ + + L + + L GY P+YGARPL+R I
Sbjct: 765 FHRLRRDEMGAIVDIQLKRLQKLLDERKIVLEMDEKARTWLANRGYEPAYGARPLKRVIQ 824
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYR 276
R ++D L+E+IL G ++ GD+V + S G +I R
Sbjct: 825 RAVQDPLSELILAGAVKDGDTVRITAGSDGLIINDR 860
>gi|326792086|ref|YP_004309907.1| ATPase AAA [Clostridium lentocellum DSM 5427]
gi|326542850|gb|ADZ84709.1| ATPase AAA-2 domain protein [Clostridium lentocellum DSM 5427]
Length = 822
Score = 303 bits (777), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 153/287 (53%), Positives = 202/287 (70%), Gaps = 15/287 (5%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
R RVG++DPNRPI SF+F GPTGVGKTEL ALA FG + AMVR+DMSEYMEKHTVSK
Sbjct: 533 RGRVGLKDPNRPIGSFMFLGPTGVGKTELTKALAEAMFGDENAMVRVDMSEYMEKHTVSK 592
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
GSPPGYVG+E GGQLTE VR +P+ V+LFDEIEKAH DV N++LQ+LDDG +TD +G+
Sbjct: 593 MIGSPPGYVGYEEGGQLTEKVRRKPYCVVLFDEIEKAHGDVFNILLQILDDGHITDSRGR 652
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEFLNR 174
++ KNTIIIMTSNIG I +G + M++ V EE++R F+PEFLNR
Sbjct: 653 RINFKNTIIIMTSNIGARSIISPKKVGFISTEDAEKSYEDMKKNVMEEVKRTFKPEFLNR 712
Query: 175 IDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKN--MELTVTHTFKKKLIEEGYNPSYGA 232
IDE +VF L+ ++ EI DIM+K + R+ +KN +E+ +T L ++GYN +YGA
Sbjct: 713 IDETLVFHPLSTKEIREIADIMIKRLITRI-SKNVGIEIQLTEEALDFLGKKGYNQAYGA 771
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRN 279
RPLRR I +ED L++ IL+G + GD V++ D G V ++ ++
Sbjct: 772 RPLRRTIQTYIEDKLSDEILSGNFKEGDVVSVTVD--GEVCVFTKQD 816
>gi|269792687|ref|YP_003317591.1| ATP-dependent chaperone ClpB [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269100322|gb|ACZ19309.1| ATP-dependent chaperone ClpB [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 871
Score = 303 bits (777), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 144/263 (54%), Positives = 196/263 (74%), Gaps = 1/263 (0%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR GI+DP RPI SFLF GPTGVGKTELA ALA F S++ M+RIDMSEYMEKH+VS+
Sbjct: 594 RARAGIKDPRRPIGSFLFLGPTGVGKTELAKALAEALFDSEDNMIRIDMSEYMEKHSVSR 653
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG++ GGQLTE VR +P+SVILFDE+EKAH DV N +LQ+LDDGRVTD G+
Sbjct: 654 LIGAPPGYVGYDEGGQLTEQVRRKPYSVILFDEVEKAHPDVFNTLLQILDDGRVTDSHGK 713
Query: 125 TVDLKNTIIIMTSNIGDSVIAR-ESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVFRQ 183
TVD KN +II+TSN+G ++R + ++ + +E++ FRPEF+NR+DE+IVF+
Sbjct: 714 TVDFKNCVIILTSNVGSQHLSRCTDPMAFEEASKRAIDEVKSLFRPEFINRLDEMIVFKP 773
Query: 184 LNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGRLL 243
L K ++ IV+++L ++ ERL+ +NM L T + + +G++P YGARPL+RAI R++
Sbjct: 774 LGKEEIGAIVEMLLGKVSERLKDRNMTLQWTPRAVEAIAHQGFDPVYGARPLKRAIQRMV 833
Query: 244 EDNLAEIILTGYIQVGDSVTMDC 266
E LA+ IL G +Q G V++D
Sbjct: 834 ETPLAKAILKGDLQEGGKVSLDA 856
>gi|407476337|ref|YP_006790214.1| chaperone protein ClpB [Exiguobacterium antarcticum B7]
gi|407060416|gb|AFS69606.1| Chaperone protein ClpB [Exiguobacterium antarcticum B7]
Length = 857
Score = 303 bits (777), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 148/271 (54%), Positives = 192/271 (70%), Gaps = 2/271 (0%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR GI+DPNRPI SFLF GPTGVGKTELA ALA F S+E +VRIDMSEYMEKH VS+
Sbjct: 586 RARAGIKDPNRPIGSFLFLGPTGVGKTELAKALAAAMFDSEEHIVRIDMSEYMEKHNVSR 645
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E GGQLTEAVR P+SV+LFDEIEKAH DV N++LQ+LDDGR+TD +G+
Sbjct: 646 LVGAPPGYVGYEEGGQLTEAVRRSPYSVLLFDEIEKAHGDVFNILLQVLDDGRLTDAQGR 705
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGS--DQMERGVAEELRRRFRPEFLNRIDEVIVFR 182
VD KNTI+IMTSNIG +++ + G+ E V +EL+ FRPEFLNRID+ I+F
Sbjct: 706 MVDFKNTIVIMTSNIGSNILLEAAKDGNIDAAEEEAVRQELKNYFRPEFLNRIDDTILFH 765
Query: 183 QLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGRL 242
L++ ++ I+D + ++ +RL + + + VT K + E + P YGARP+ R I R
Sbjct: 766 PLHRAEIERIIDKAVSKMADRLSGREITIDVTDAAKTLIFNEAFEPQYGARPINRYIQRT 825
Query: 243 LEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
+E LA +++G IQ G V +D D VI
Sbjct: 826 IETKLARALISGAIQDGSHVAVDTDGTELVI 856
>gi|422408257|ref|ZP_16485218.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes FSL F2-208]
gi|313611199|gb|EFR86009.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes FSL F2-208]
Length = 820
Score = 303 bits (777), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 143/278 (51%), Positives = 200/278 (71%), Gaps = 9/278 (3%)
Query: 1 MTLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKH 60
+ + RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +++M+RIDMSEYMEK
Sbjct: 521 LAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDEDSMIRIDMSEYMEKF 580
Query: 61 TVSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTD 120
+ ++ G+PPGYVG+E GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 581 STARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEIEKAHPDVFNMLLQVLDDGRLTD 640
Query: 121 GKGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEF 171
KG+ VD +NT+IIMTSNIG + ++ +G ME V ++L++ FRPEF
Sbjct: 641 SKGRVVDFRNTVIIMTSNIGAQEMKQDKSMGFNVIDPLKDHKAMEHRVLQDLKQAFRPEF 700
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
+NRIDE IVF L + +L +IV ++ ++ +RL +++ + +T K K+ ++GY+P YG
Sbjct: 701 INRIDETIVFHSLQEKELKQIVTLLTAQLTKRLAERDIHVKLTEGAKAKIAKDGYDPEYG 760
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
ARPL+RAI + +ED L+E +L G I+VGD V + G
Sbjct: 761 ARPLKRAIQKEVEDMLSEELLRGNIKVGDYVEIGVKDG 798
>gi|217965681|ref|YP_002351359.1| negative regulator of genetic competence ClpC/mecB [Listeria
monocytogenes HCC23]
gi|290892627|ref|ZP_06555620.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes FSL
J2-071]
gi|386006961|ref|YP_005925239.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes L99]
gi|386025542|ref|YP_005946318.1| Clp endopeptidase ATP-binding subunit [Listeria monocytogenes M7]
gi|404406685|ref|YP_006689400.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2376]
gi|217334951|gb|ACK40745.1| negative regulator of genetic competence ClpC/mecB [Listeria
monocytogenes HCC23]
gi|290557936|gb|EFD91457.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes FSL
J2-071]
gi|307569771|emb|CAR82950.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes L99]
gi|336022123|gb|AEH91260.1| Clp endopeptidase ATP-binding subunit; putative ClpB [Listeria
monocytogenes M7]
gi|404240834|emb|CBY62234.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2376]
Length = 820
Score = 303 bits (777), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 143/278 (51%), Positives = 200/278 (71%), Gaps = 9/278 (3%)
Query: 1 MTLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKH 60
+ + RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +++M+RIDMSEYMEK
Sbjct: 521 LAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDEDSMIRIDMSEYMEKF 580
Query: 61 TVSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTD 120
+ ++ G+PPGYVG+E GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 581 STARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEIEKAHPDVFNMLLQVLDDGRLTD 640
Query: 121 GKGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEF 171
KG+ VD +NT+IIMTSNIG + ++ +G ME V ++L++ FRPEF
Sbjct: 641 SKGRVVDFRNTVIIMTSNIGAQEMKQDKSMGFNVIDPLKDHKAMEHRVLQDLKQAFRPEF 700
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
+NRIDE IVF L + +L +IV ++ ++ +RL +++ + +T K K+ ++GY+P YG
Sbjct: 701 INRIDETIVFHSLQEKELKQIVTLLTAQLTKRLAERDIHVKLTEGAKAKIAKDGYDPEYG 760
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
ARPL+RAI + +ED L+E +L G I+VGD V + G
Sbjct: 761 ARPLKRAIQKEVEDMLSEELLRGNIKVGDYVEIGVKDG 798
>gi|334706239|ref|ZP_08522105.1| ATP-dependent chaperone protein ClpB [Aeromonas caviae Ae398]
Length = 857
Score = 303 bits (777), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 145/270 (53%), Positives = 196/270 (72%), Gaps = 1/270 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F +++AMVRIDMSE+MEKH+
Sbjct: 583 AIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALAEFLFDTQDAMVRIDMSEFMEKHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA-RESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT++IMTSN+G +I S D+M+ + E L R FRPEF+NRIDE +V
Sbjct: 703 QGRTVDFRNTVVIMTSNLGSDLIQEHHSEKDYDEMKAMLMEVLTRSFRPEFINRIDETVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L + + I I LK + RLE++ E+ V+ KL+ G++P YGARPL+RAI
Sbjct: 763 FHPLGEEHIKSIARIQLKSLMNRLESQGFEVEVSEELLTKLVHAGFDPVYGARPLKRAIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSGG 270
+ +E+ LA+ +L+G + G ++ + DS G
Sbjct: 823 QKVENPLAQALLSGRVIPGKTLRLGADSNG 852
>gi|255520324|ref|ZP_05387561.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes FSL
J1-175]
Length = 819
Score = 303 bits (777), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 143/278 (51%), Positives = 200/278 (71%), Gaps = 9/278 (3%)
Query: 1 MTLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKH 60
+ + RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +++M+RIDMSEYMEK
Sbjct: 521 LAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDEDSMIRIDMSEYMEKF 580
Query: 61 TVSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTD 120
+ ++ G+PPGYVG+E GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 581 STARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEIEKAHPDVFNMLLQVLDDGRLTD 640
Query: 121 GKGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEF 171
KG+ VD +NT+IIMTSNIG + ++ +G ME V ++L++ FRPEF
Sbjct: 641 SKGRVVDFRNTVIIMTSNIGAQEMKQDKSMGFNVIDPLKDHKAMEHRVLQDLKQAFRPEF 700
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
+NRIDE IVF L + +L +IV ++ ++ +RL +++ + +T K K+ ++GY+P YG
Sbjct: 701 INRIDETIVFHSLQEKELKQIVTLLTAQLTKRLAERDIHVKLTEGAKSKIAKDGYDPEYG 760
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
ARPL+RAI + +ED L+E +L G I+VGD V + G
Sbjct: 761 ARPLKRAIQKEVEDMLSEELLRGNIKVGDYVEIGVKDG 798
>gi|296130887|ref|YP_003638137.1| ATPase AAA-2 domain-containing protein [Cellulomonas flavigena DSM
20109]
gi|296022702|gb|ADG75938.1| ATPase AAA-2 domain protein [Cellulomonas flavigena DSM 20109]
Length = 858
Score = 303 bits (777), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 144/279 (51%), Positives = 201/279 (72%), Gaps = 10/279 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R R G++DP RP SF+F GPTGVGKTELA ALA FG ++A++++DMSE+ EKHT
Sbjct: 527 AIRRTRAGLKDPKRPGGSFIFAGPTGVGKTELAKALAEFLFGDEDALIQLDMSEFSEKHT 586
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ FGSPPGYVG++ GGQLTE VR +P SV+LFDE+EKAH D+ N +LQ+L+DGR+TD
Sbjct: 587 VSRLFGSPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHADIFNSLLQILEDGRLTDS 646
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
+G+ +D KNT+IIMT+N+G IA+ + G ++M+ V +EL+ FRPEF
Sbjct: 647 QGRVIDFKNTVIIMTTNLGTRDIAKGVMTGFQAGGELATDYERMKAKVNDELKTHFRPEF 706
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNR+D+V+VF QL++ ++ +IVD+M+ ++ RL K+M + +T KK L E GY+P G
Sbjct: 707 LNRVDDVVVFPQLSQPEIFQIVDLMIAKLDARLRDKDMSIEITPAAKKLLAERGYDPVLG 766
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGG 270
ARPLRRAI R +ED L+E IL G ++ G +V +D G
Sbjct: 767 ARPLRRAIQREIEDTLSEKILFGELKAGQTVIVDAQGEG 805
>gi|295109439|emb|CBL23392.1| ATP-dependent chaperone ClpB [Ruminococcus obeum A2-162]
Length = 860
Score = 303 bits (777), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 148/274 (54%), Positives = 200/274 (72%), Gaps = 7/274 (2%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
R++ GI+DP++PI SFLF GPTGVGKTELA LA F ++ MVRIDMSEYMEK++VS+
Sbjct: 586 RSKAGIKDPSKPIGSFLFLGPTGVGKTELAKTLAATLFDDEQNMVRIDMSEYMEKYSVSR 645
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E GGQLTEAVR +P+SV+LFDEIEKAH DV NV+LQ+LDDGR+TD +G+
Sbjct: 646 LIGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRITDSQGR 705
Query: 125 TVDLKNTIIIMTSNIG-----DSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVI 179
TVD KNTI+IMTSNIG D + + I + + V +LR FRPEFLNR+DE+I
Sbjct: 706 TVDFKNTILIMTSNIGSPYLLDGIDEKGEI--KPEAQEQVMNDLRGHFRPEFLNRLDEII 763
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
+F+ L K + IVD+M+KE+ +RL + + L +T + ++IE GY+P YGARPL+R +
Sbjct: 764 MFKPLTKENIGGIVDLMVKELSDRLADQELSLELTDAARTQVIENGYDPIYGARPLKRYL 823
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
+E +A+ IL+G + GD++ +D G VI
Sbjct: 824 QNYVETLVAKKILSGDVHQGDTLVLDVKDGEFVI 857
>gi|229170933|ref|ZP_04298534.1| Negative regulator of genetic competence [Bacillus cereus MM3]
gi|423405194|ref|ZP_17382367.1| chaperone ClpB [Bacillus cereus BAG2X1-2]
gi|423462644|ref|ZP_17439438.1| chaperone ClpB [Bacillus cereus BAG5X2-1]
gi|423480037|ref|ZP_17456751.1| chaperone ClpB [Bacillus cereus BAG6X1-1]
gi|228612473|gb|EEK69694.1| Negative regulator of genetic competence [Bacillus cereus MM3]
gi|401130823|gb|EJQ38479.1| chaperone ClpB [Bacillus cereus BAG5X2-1]
gi|401645564|gb|EJS63219.1| chaperone ClpB [Bacillus cereus BAG2X1-2]
gi|402424021|gb|EJV56217.1| chaperone ClpB [Bacillus cereus BAG6X1-1]
Length = 811
Score = 303 bits (777), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 146/274 (53%), Positives = 196/274 (71%), Gaps = 9/274 (3%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+RIDMSEYMEKH+ S+ GS
Sbjct: 531 GLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGS 590
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG+E GGQLTE VR +P+SV+L DE+EKAH DV N++LQ+L+DGR+TD KG+TVD
Sbjct: 591 PPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDF 650
Query: 129 KNTIIIMTSNIGDSVIARESILGSD---------QMERGVAEELRRRFRPEFLNRIDEVI 179
+NTI+IMTSN+G + R LG + M+ V +EL++ FRPEFLNRIDE+I
Sbjct: 651 RNTIVIMTSNVGADALKRNKHLGFNVQDESRDYSDMKGKVMDELKKAFRPEFLNRIDEII 710
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF L K + EIV +M+ ++ +RL+ + +EL +T + ++G++ YGARPLRRAI
Sbjct: 711 VFHMLEKKHIQEIVTLMVNQLVKRLKEQEIELHLTEGAISAIADKGFDREYGARPLRRAI 770
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
+ +ED L+E +L G I+ G V D + VI
Sbjct: 771 QKHVEDRLSEELLKGAIEKGQKVIFDVEGESFVI 804
>gi|225389435|ref|ZP_03759159.1| hypothetical protein CLOSTASPAR_03183, partial [Clostridium
asparagiforme DSM 15981]
gi|225044504|gb|EEG54750.1| hypothetical protein CLOSTASPAR_03183 [Clostridium asparagiforme
DSM 15981]
Length = 347
Score = 303 bits (777), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 153/272 (56%), Positives = 194/272 (71%), Gaps = 11/272 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R RVG++DP+RPI SFLF GPTGVGKTEL+ LA FG++ A++R+DMSEYMEKH+
Sbjct: 34 AIRRGRVGLKDPSRPIGSFLFLGPTGVGKTELSKTLAEAMFGTESALIRVDMSEYMEKHS 93
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGYVG++ GGQL+E VR P+SVILFDEIEKAH DV N++LQ+LDDG +TD
Sbjct: 94 VSKMIGSPPGYVGYDEGGQLSEKVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGHITDA 153
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----------SDQMERGVAEELRRRFRPEF 171
+G+ +D KNTIIIMTSN G I LG D M+ V EE++R F+PEF
Sbjct: 154 QGRKIDFKNTIIIMTSNAGAENIISPKRLGFGMASDAKADYDFMKGRVMEEVKRLFKPEF 213
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAK-NMELTVTHTFKKKLIEEGYNPSY 230
LNRIDE+IVF QLNK + IV+IML+ I +R + + + LTV K LI++GY+ Y
Sbjct: 214 LNRIDEIIVFHQLNKEHMKGIVEIMLRSIVKRAKDQLGISLTVGEEAKTLLIDKGYDEKY 273
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSV 262
GARPLRR I +LED +AE +L G I+ G V
Sbjct: 274 GARPLRRTIQSMLEDKMAEAMLDGTIKTGCKV 305
>gi|148359294|ref|YP_001250501.1| endopeptidase Clp ATP-binding chain B (ClpB) [Legionella
pneumophila str. Corby]
gi|148281067|gb|ABQ55155.1| endopeptidase Clp ATP-binding chain B (ClpB) [Legionella
pneumophila str. Corby]
Length = 858
Score = 303 bits (777), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 142/269 (52%), Positives = 196/269 (72%), Gaps = 1/269 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F ++EAMVRIDMSE+MEKH+
Sbjct: 583 AIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALASFLFDTEEAMVRIDMSEFMEKHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG+E GG LTEAVR RP+SV+L DE+EKAH DV N++LQ++DDGR+TDG
Sbjct: 643 VARLIGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHTDVFNILLQVMDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR-ESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +NT+I+MTSN+G +I S D+++ V + + + FRPEF+NRIDE +V
Sbjct: 703 QGRTVDFRNTVIVMTSNLGSQLIQEMSSKFNYDEIKAAVMDLVSQHFRPEFINRIDESVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L K Q+ +I I + ++ RL+ +N+ L VT+ L E G++P YGARPL+R I
Sbjct: 763 FHSLAKEQIAKIAAIQINYLHHRLKQQNITLEVTNEALSHLAEAGFDPVYGARPLKRTIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
+ LE+ LA+ +LTG + GD++ + G
Sbjct: 823 QKLENPLAQSLLTGKFKSGDTIIVSYKDG 851
>gi|54035749|sp|O87444.2|CLPB_PLEBO RecName: Full=Chaperone protein ClpB
Length = 873
Score = 303 bits (777), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 158/273 (57%), Positives = 190/273 (69%), Gaps = 16/273 (5%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+R G+ DPNRP +SF+F GPTGVGKTELA ALA F ++EAMVRIDMSEYMEKH+
Sbjct: 590 AIQRSRAGLSDPNRPTASFIFLGPTGVGKTELAKALAAFLFDTEEAMVRIDMSEYMEKHS 649
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG+E GGQLTEAVR RP+SVILFDEIEKAH DV NVMLQ+LDDGRVTD
Sbjct: 650 VSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRVTDS 709
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIAR--------ESILGSDQMERGVAEELRRRFRPEFLN 173
+G+TVD KNTIIIMTSNIG I E IL V E + FRPEFLN
Sbjct: 710 QGRTVDFKNTIIIMTSNIGSQYIFEYGGDDDRYEEILSR------VMEAMLSNFRPEFLN 763
Query: 174 RIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGAR 233
RIDE+I+F L K QL EIV I + RL A+ M L ++ + EG++P YGAR
Sbjct: 764 RIDEIIIFHSLQKAQLREIVKIQTHRLESRL-ARKMSLKLSDA-ALDFLAEGFDPVYGAR 821
Query: 234 PLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
PL+RAI R LE +A+ IL GD++ +D
Sbjct: 822 PLKRAIQRELETTIAKEILRSNFTEGDTIFVDV 854
>gi|410658561|ref|YP_006910932.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Dehalobacter
sp. DCA]
gi|410661548|ref|YP_006913919.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Dehalobacter
sp. CF]
gi|409020916|gb|AFV02947.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Dehalobacter
sp. DCA]
gi|409023904|gb|AFV05934.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Dehalobacter
sp. CF]
Length = 827
Score = 303 bits (777), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 142/274 (51%), Positives = 202/274 (73%), Gaps = 9/274 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++ RAR G++DP RPI SF+F GPTGVGKT+LA +LA FG + +++R+DMSEYMEKH
Sbjct: 530 SIRRARAGLKDPKRPIGSFIFLGPTGVGKTQLARSLAESLFGDENSLIRVDMSEYMEKHA 589
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ GSPPGYVG + GGQLTEAVR +P+SVILFDEIEKAH +V N++LQ+L+DGR+TD
Sbjct: 590 VSRMVGSPPGYVGHDEGGQLTEAVRRKPYSVILFDEIEKAHPEVFNILLQVLEDGRLTDS 649
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARES---ILGSDQ------MERGVAEELRRRFRPEFL 172
KG+ VD +N ++IMTSN+G S + +ES + G + M + EEL++ FRPEFL
Sbjct: 650 KGRLVDFRNCVLIMTSNVGASFLKKESLGFVSGRSEESEYKSMSSRIMEELKKTFRPEFL 709
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NR+DE++VF L + L++I I++K++ +RL+ + +EL + + L EEG +P+YGA
Sbjct: 710 NRVDEMVVFHPLKQDDLVKITKILIKDVSKRLKEQELELVLDDEVLEHLAEEGNDPTYGA 769
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDC 266
RPLRRAI +++ED L+E IL G GD++ ++
Sbjct: 770 RPLRRAIQKMIEDPLSEKILEGTYNAGDTIKVEL 803
>gi|1314297|gb|AAC44446.1| ClpC ATPase [Listeria monocytogenes]
Length = 825
Score = 303 bits (777), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 143/278 (51%), Positives = 200/278 (71%), Gaps = 9/278 (3%)
Query: 1 MTLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKH 60
+ + RAR G++DP RPI SF+F GPTGVGKTELA ALA FG +++M+RIDMSEYMEK
Sbjct: 526 LAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDEDSMIRIDMSEYMEKF 585
Query: 61 TVSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTD 120
+ ++ G+PPGYVG+E GGQLTE VR +P+SV+L DEIEKAH DV N++LQ+LDDGR+TD
Sbjct: 586 STARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEIEKAHPDVFNMLLQVLDDGRLTD 645
Query: 121 GKGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEF 171
KG+ VD +NT+IIMTSNIG + ++ +G ME V ++L++ FRPEF
Sbjct: 646 SKGRVVDFRNTVIIMTSNIGAQEMKQDKSMGFNVTDPLKDHKAMEHRVLQDLKQAFRPEF 705
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
+NRIDE IVF L + +L +IV ++ ++ +RL +++ + +T K K+ ++GY+P YG
Sbjct: 706 INRIDETIVFHSLQEKELKQIVTLLTAQLTKRLAERDIHVKLTEGAKSKIAKDGYDPEYG 765
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
ARPL+RAI + +ED L+E +L G I+VGD V + G
Sbjct: 766 ARPLKRAIQKEVEDMLSEELLRGNIKVGDYVEIGVKDG 803
>gi|414085563|ref|YP_006994274.1| torsin family protein [Carnobacterium maltaromaticum LMA28]
gi|412999150|emb|CCO12959.1| torsin family protein [Carnobacterium maltaromaticum LMA28]
Length = 365
Score = 303 bits (777), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 143/277 (51%), Positives = 198/277 (71%), Gaps = 9/277 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DPNRPI SF+F GPTGVGKTELA ALA FGS++A++R+DMSEYMEK++
Sbjct: 68 AMRRARSGLKDPNRPIGSFMFLGPTGVGKTELAKALAESMFGSEDALIRVDMSEYMEKYS 127
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG++ GGQLTE +R +P+SV+L DE+EKAH DV N++LQ+LDDG +TD
Sbjct: 128 TSRLIGSPPGYVGYDEGGQLTEKIRQKPYSVVLLDEVEKAHPDVFNILLQVLDDGHLTDA 187
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG---------SDQMERGVAEELRRRFRPEFL 172
KG+ VD KNTI+IMTSN+G + + E +G ME+ + EEL+ FRPEF+
Sbjct: 188 KGRKVDFKNTILIMTSNLGATSLRDEKSVGFSTKDTKKDHKAMEKRILEELKNTFRPEFI 247
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE IVF L K +L EIV +M I +RL+ ++ + +T + + + G++P YGA
Sbjct: 248 NRIDETIVFHSLEKNELNEIVKLMAAIIVKRLKDLDIHVKITPAAIEVIAKAGFDPEYGA 307
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSG 269
RPLRRA+ + +ED L+E +L +++GD VT+ G
Sbjct: 308 RPLRRALQKEVEDRLSEELLNKTVKIGDHVTIGAAKG 344
>gi|357393001|ref|YP_004907842.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Kitasatospora
setae KM-6054]
gi|311899478|dbj|BAJ31886.1| putative ATP-dependent Clp protease ATP-binding subunit ClpC
[Kitasatospora setae KM-6054]
Length = 829
Score = 303 bits (777), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 146/268 (54%), Positives = 194/268 (72%), Gaps = 1/268 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRP+ SFLF GPTGVGKTELA ALA FG ++ +VR DMSE+ EKHT
Sbjct: 551 AVRRSRAGMADPNRPVGSFLFLGPTGVGKTELAKALAELIFGDEDRLVRFDMSEFQEKHT 610
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ G+PPGYVG++ GQLTEAVR RP+SV+LFDE+EKAH DV N +LQ+LDDGR+TD
Sbjct: 611 VSRLVGAPPGYVGYDEAGQLTEAVRRRPYSVLLFDEVEKAHPDVFNALLQVLDDGRLTDA 670
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMERGVAEELRRRFRPEFLNRIDEVIVF 181
+G+TVD +NT++IMTSNIG +I + +R + EELR RF PEFLNRID++IVF
Sbjct: 671 QGRTVDFRNTVVIMTSNIGSQLILSHKGETEEIRDR-LMEELRGRFLPEFLNRIDDIIVF 729
Query: 182 RQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGR 241
L+ L+ IVD+ML R++A+ +EL VT K L+ +G+ P +GARPLRR I
Sbjct: 730 DALDADDLLRIVDLMLANSERRVKAQGLELEVTSAAKDWLVGKGHQPEFGARPLRRTIQT 789
Query: 242 LLEDNLAEIILTGYIQVGDSVTMDCDSG 269
L++ LA ++L+G +Q GD++ D G
Sbjct: 790 QLDNRLATMLLSGDLQPGDTIVADAKDG 817
>gi|229159255|ref|ZP_04287279.1| Negative regulator of genetic competence [Bacillus cereus R309803]
gi|228624147|gb|EEK80949.1| Negative regulator of genetic competence [Bacillus cereus R309803]
Length = 811
Score = 303 bits (777), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 146/274 (53%), Positives = 196/274 (71%), Gaps = 9/274 (3%)
Query: 9 GIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSKFFGS 68
G++DP RPI SF+F GPTGVGKTELA ALA FG ++AM+RIDMSEYMEKH+ S+ GS
Sbjct: 531 GLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDEDAMIRIDMSEYMEKHSTSRLVGS 590
Query: 69 PPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQTVDL 128
PPGYVG+E GGQLTE VR +P+SV+L DE+EKAH DV N++LQ+L+DGR+TD KG+TVD
Sbjct: 591 PPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDF 650
Query: 129 KNTIIIMTSNIGDSVIARESILGSD---------QMERGVAEELRRRFRPEFLNRIDEVI 179
+NTI+IMTSN+G + R LG + M+ V +EL++ FRPEFLNRIDE+I
Sbjct: 651 RNTIVIMTSNVGAEALKRNKHLGFNVQDESRDYSDMKGKVMDELKKAFRPEFLNRIDEII 710
Query: 180 VFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAI 239
VF L K + EIV++M+ ++ RL+ + +EL +T + ++G++ YGARPLRRAI
Sbjct: 711 VFHMLEKKHIQEIVNLMVNQLVNRLKEQEIELHLTEGAISAIADKGFDREYGARPLRRAI 770
Query: 240 GRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVI 273
+ +ED L+E +L G I+ G V D + VI
Sbjct: 771 QKHVEDRLSEELLKGAIEKGQKVIFDVEGETFVI 804
>gi|381208304|ref|ZP_09915375.1| ATP-dependent Clp protease [Lentibacillus sp. Grbi]
Length = 810
Score = 303 bits (777), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 145/283 (51%), Positives = 201/283 (71%), Gaps = 10/283 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DP RPI SF+F GPTGVGKTELA ALA F +EAM+RIDMSEYMEKH
Sbjct: 526 AIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFADEEAMIRIDMSEYMEKHA 585
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
S+ GSPPGYVG++ GGQLTE VR +P+SV+L DE+EKAH +V N++LQ+L+DGR+TD
Sbjct: 586 TSRLVGSPPGYVGYDEGGQLTEKVRTKPYSVVLLDEVEKAHPEVFNILLQVLEDGRLTDS 645
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILG----SDQ------MERGVAEELRRRFRPEF 171
KG+ VD +NT++IMTSN+G + + R +G DQ M+ V +EL++ FRPEF
Sbjct: 646 KGRVVDFRNTVLIMTSNVGANELKRNKYVGFALDDDQEQDYQNMKTKVTDELKKAFRPEF 705
Query: 172 LNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYG 231
LNRIDE IVF L + + IV++M+K++ RL +++E T+T +K+ EG++P YG
Sbjct: 706 LNRIDETIVFHSLERKHMKYIVNLMIKQLQSRLIQQDIEFTLTDKAVEKIANEGFDPEYG 765
Query: 232 ARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIM 274
ARPLRR+I + +ED L+E +L Q G+ V + ++ G I+
Sbjct: 766 ARPLRRSIQKNIEDMLSEELLKENFQKGEKVKIGLNNKGEFII 808
>gi|116309455|emb|CAH66527.1| H0502B11.7 [Oryza sativa Indica Group]
Length = 937
Score = 303 bits (777), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 147/287 (51%), Positives = 203/287 (70%), Gaps = 12/287 (4%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++R+RVG+ DP+RPI++ +F GPTGVGKTEL ALA YFGS+ A VR+DMSEYME+H
Sbjct: 636 AVKRSRVGLNDPDRPIATLIFCGPTGVGKTELTKALAASYFGSESATVRLDMSEYMERHA 695
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VSK GSPPGY+GF GG LTEAVR +P +V+L DEIEKAH D+ N++LQ+ +DG +TD
Sbjct: 696 VSKLIGSPPGYMGFGEGGTLTEAVRRKPFTVVLLDEIEKAHPDIFNILLQIFEDGHLTDS 755
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA--RESILGSDQ----------MERGVAEELRRRFRP 169
+G+ V KNT+I+MTSN+G + I+ + SI Q M+ V EEL+ FRP
Sbjct: 756 QGRRVSFKNTLIVMTSNVGSTSISNGKRSIGFQTQTDTEEKSYAAMKSLVMEELKAFFRP 815
Query: 170 EFLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPS 229
E LNRIDEV+VF L K Q++ I++IML+E+ R+ A + L V+ + K + + GY+ S
Sbjct: 816 ELLNRIDEVVVFHPLEKTQMLAILNIMLQEVKGRILALGIGLEVSDSMKDLISQHGYDKS 875
Query: 230 YGARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYR 276
YGARPLRRA+ +L+ED ++E IL+G + GD++ MD D+ G + R
Sbjct: 876 YGARPLRRAVTQLVEDVISEAILSGQFKPGDTIMMDTDATGKPCLSR 922
>gi|399037187|ref|ZP_10734066.1| ATP-dependent chaperone ClpB [Rhizobium sp. CF122]
gi|398065179|gb|EJL56830.1| ATP-dependent chaperone ClpB [Rhizobium sp. CF122]
Length = 867
Score = 303 bits (777), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 151/296 (51%), Positives = 203/296 (68%), Gaps = 23/296 (7%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ RAR G++DPNRPI SF+F GPTGVGKTEL ALA F + AMVR+DMSEYMEKH+
Sbjct: 584 AVRRARAGLQDPNRPIGSFIFLGPTGVGKTELTKALARFLFDDETAMVRMDMSEYMEKHS 643
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG++ GG LTEAVR RP+ V+LFDEIEKAH DV N++LQ+LDDGR+TDG
Sbjct: 644 VARLIGAPPGYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNILLQVLDDGRLTDG 703
Query: 122 KGQTVDLKNTIIIMTSNIG-----------DSVIARESILGSDQMERGVAEELRRRFRPE 170
+G+TVD +NT+IIMTSN+G DS + RE ++ E +R FRPE
Sbjct: 704 QGRTVDFRNTMIIMTSNLGAEYLTQLKEGDDSEVVREQVM----------EVVRSHFRPE 753
Query: 171 FLNRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSY 230
FLNRIDE+I+F +L + ++ IVDI LK + L + + L + + L +GY+P Y
Sbjct: 754 FLNRIDEIILFHRLKREEMGAIVDIQLKRLVALLAERKITLELDDDARTWLANKGYDPVY 813
Query: 231 GARPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMTVCA 286
GARPL+R I + ++D LAE IL+G QV D T+ SG + +++R RN ++ A
Sbjct: 814 GARPLKRVIQKYVQDPLAEQILSG--QVPDGSTVKITSGTDRLLFRTRNTAVNEAA 867
>gi|108804998|ref|YP_644935.1| ATPase [Rubrobacter xylanophilus DSM 9941]
gi|108766241|gb|ABG05123.1| ATPase AAA-2 [Rubrobacter xylanophilus DSM 9941]
Length = 834
Score = 303 bits (777), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 145/275 (52%), Positives = 198/275 (72%), Gaps = 9/275 (3%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
++ R G++DPNRP SF+F GPTGVGKTELA LA FG ++AM+R+DMSEYME+HT
Sbjct: 532 SIRRTMAGLKDPNRPSGSFVFLGPTGVGKTELARTLAEYLFGDQDAMIRLDMSEYMERHT 591
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
VS+ GSPPGYVG++ GGQLTE VR RP+SV+LFDEIEKAH DV N++LQ+L+DG++TD
Sbjct: 592 VSRLVGSPPGYVGYDEGGQLTEQVRRRPYSVVLFDEIEKAHPDVFNILLQILEDGQLTDA 651
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSDQMERG---------VAEELRRRFRPEFL 172
+G+TVD KN ++IMTSN+G I + LG E G V ELR+ FRPE L
Sbjct: 652 QGRTVDFKNVVLIMTSNVGAQHINKTKTLGFGAGEEGLSYKEMKSRVTSELRKIFRPELL 711
Query: 173 NRIDEVIVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGA 232
NRIDE+IVF +L + + +I++I +K + E+L +N+ L T KL EEGY+P++GA
Sbjct: 712 NRIDEIIVFHKLEREHVRQIIEIQVKRLREQLAERNVTLEFTPEALDKLAEEGYDPAFGA 771
Query: 233 RPLRRAIGRLLEDNLAEIILTGYIQVGDSVTMDCD 267
RPL+R + R++ED ++E+IL G I G VT++ +
Sbjct: 772 RPLKRVLQRMVEDPMSEMILRGDIPDGSKVTIEAN 806
>gi|117619764|ref|YP_858496.1| ATP-dependent chaperone protein ClpB [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117561171|gb|ABK38119.1| ATP-dependent chaperone protein ClpB [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 857
Score = 303 bits (777), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 146/270 (54%), Positives = 195/270 (72%), Gaps = 1/270 (0%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRPI SFLF GPTGVGKTEL ALA F +++AMVRIDMSE+MEKH+
Sbjct: 583 AIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALAEFLFDTQDAMVRIDMSEFMEKHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVG+E GG LTEAVR RP+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIA-RESILGSDQMERGVAEELRRRFRPEFLNRIDEVIV 180
+G+TVD +N+++IMTSN+G +I S D+M+ + E L R FRPEF+NRIDE +V
Sbjct: 703 QGRTVDFRNSVVIMTSNLGSDLIQEHHSEKDYDEMKGMLMEVLTRSFRPEFINRIDETVV 762
Query: 181 FRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIG 240
F L + + I I LK + RLEA+ E+ V+ +KL+ G++P YGARPL+RAI
Sbjct: 763 FHPLGEEHIKSIARIQLKSLMGRLEAQGYEVEVSEALLEKLVHAGFDPVYGARPLKRAIQ 822
Query: 241 RLLEDNLAEIILTGYIQVGDSVTMDCDSGG 270
+E+ LA+ +L+G I G + + DS G
Sbjct: 823 HKVENPLAQALLSGRIVPGKKLVLGADSNG 852
>gi|77165844|ref|YP_344369.1| ATP-dependent Clp protease [Nitrosococcus oceani ATCC 19707]
gi|254434018|ref|ZP_05047526.1| ATPase, AAA family [Nitrosococcus oceani AFC27]
gi|76884158|gb|ABA58839.1| ATP-dependent Clp protease [Nitrosococcus oceani ATCC 19707]
gi|207090351|gb|EDZ67622.1| ATPase, AAA family [Nitrosococcus oceani AFC27]
Length = 865
Score = 303 bits (777), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 147/287 (51%), Positives = 203/287 (70%), Gaps = 7/287 (2%)
Query: 2 TLERARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHT 61
+ R+R G+ DPNRP SFLF GPTGVGKTEL ALA F ++EAMVRIDMSE+ME+H+
Sbjct: 583 AIRRSRAGLADPNRPNGSFLFLGPTGVGKTELCKALAAFLFDTEEAMVRIDMSEFMERHS 642
Query: 62 VSKFFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDG 121
V++ G+PPGYVGFE GG LTEAVR +P+SVIL DE+EKAH DV N++LQ+LDDGR+TDG
Sbjct: 643 VARLIGAPPGYVGFEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDG 702
Query: 122 KGQTVDLKNTIIIMTSNIGDSVIARESILGSD---QMERGVAEELRRRFRPEFLNRIDEV 178
G+TVD +NT+++MTSN+G VI + + G D +M+ V E + + FRPEF+NR+D+V
Sbjct: 703 HGRTVDFRNTVVVMTSNLGSHVI--QEMAGEDRYQEMKSAVMEIVGQHFRPEFINRVDDV 760
Query: 179 IVFRQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRA 238
+VF L K QL I I + + +RL + M LT+ KL E G++P YGARPL+RA
Sbjct: 761 VVFHPLQKAQLQAIAQIQIGYLQQRLAQREMVLTIPEEALSKLAEAGFDPVYGARPLKRA 820
Query: 239 IGRLLEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYRHRNGSMTVC 285
I + +E+ LA+ IL G + GDS+ + D G+ +++ +++V
Sbjct: 821 IQQRIENPLAQEILAGKFEPGDSIEVGVD--GDQFIFKREARAVSVA 865
>gi|392393805|ref|YP_006430407.1| ATP-dependent chaperone ClpB [Desulfitobacterium dehalogenans ATCC
51507]
gi|390524883|gb|AFM00614.1| ATP-dependent chaperone ClpB [Desulfitobacterium dehalogenans ATCC
51507]
Length = 864
Score = 303 bits (777), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 147/274 (53%), Positives = 196/274 (71%), Gaps = 2/274 (0%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
R+R G++DPNRP+ SFLF GPTGVGKTELA ALA F ++ +VRIDMSEYMEKHTVS+
Sbjct: 589 RSRAGLQDPNRPLGSFLFLGPTGVGKTELAKALAEFLFDDEQGIVRIDMSEYMEKHTVSR 648
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E GGQLTEAVR +P+SV+LFDE+EKAH DV NV+LQLLDDGR+TDG+G+
Sbjct: 649 LIGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEVEKAHGDVFNVLLQLLDDGRLTDGQGR 708
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSDQ--MERGVAEELRRRFRPEFLNRIDEVIVFR 182
V+ KNT++I+TSNI +I + G+ Q + V EEL+ FRPEFLNR+DE+IVF
Sbjct: 709 VVNFKNTVVILTSNIASPLIQELTASGASQEALRSRVTEELKVYFRPEFLNRLDEIIVFH 768
Query: 183 QLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGRL 242
L + + IV I + + + L + + L ++ K+I++GY+P YGARPL+R I +
Sbjct: 769 PLGQEHIGSIVQIQINRLRDYLAPRKITLGLSDAALNKIIQQGYDPVYGARPLKRVIQQN 828
Query: 243 LEDNLAEIILTGYIQVGDSVTMDCDSGGNVIMYR 276
L++ LA IL G I GD V + D G ++ R
Sbjct: 829 LQNPLAMKILQGVIHEGDHVVVKLDPQGELLFER 862
>gi|296122295|ref|YP_003630073.1| ATP-dependent chaperone ClpB [Planctomyces limnophilus DSM 3776]
gi|296014635|gb|ADG67874.1| ATP-dependent chaperone ClpB [Planctomyces limnophilus DSM 3776]
Length = 871
Score = 303 bits (777), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 147/268 (54%), Positives = 197/268 (73%), Gaps = 5/268 (1%)
Query: 5 RARVGIRDPNRPISSFLFTGPTGVGKTELANALAFEYFGSKEAMVRIDMSEYMEKHTVSK 64
RAR G++DPNRPI SF+F GPTGVGKTEL ALA F ++AMVRIDMSE+MEKH+V++
Sbjct: 597 RARSGMQDPNRPIGSFMFLGPTGVGKTELCKALAEFLFDDEKAMVRIDMSEFMEKHSVAR 656
Query: 65 FFGSPPGYVGFENGGQLTEAVRHRPHSVILFDEIEKAHRDVLNVMLQLLDDGRVTDGKGQ 124
G+PPGYVG+E GG+LTEAVR RP+SV+L DE+EKAHRDV NV+LQ+LDDGR+TDG+G+
Sbjct: 657 LIGAPPGYVGYEEGGKLTEAVRRRPYSVLLLDEVEKAHRDVFNVLLQVLDDGRLTDGQGR 716
Query: 125 TVDLKNTIIIMTSNIGDSVIARESILGSD---QMERGVAEELRRRFRPEFLNRIDEVIVF 181
TVD NTII+MTSNIG +I + G+D ++ V LR+ F PEFLNR+DEVIVF
Sbjct: 717 TVDFTNTIIVMTSNIGSQLIM--DLSGTDDEGEIHSRVMGALRKEFLPEFLNRVDEVIVF 774
Query: 182 RQLNKMQLMEIVDIMLKEIYERLEAKNMELTVTHTFKKKLIEEGYNPSYGARPLRRAIGR 241
L + ++ +IVD+ L ++ +RL ++ L V+ + K L EGY+P+YGARPL+R I +
Sbjct: 775 HPLGRKEIRQIVDLQLAKLIKRLAEHDIRLEVSDSVKDVLATEGYDPTYGARPLKRVIQQ 834
Query: 242 LLEDNLAEIILTGYIQVGDSVTMDCDSG 269
L++ LA +L+G + V +D G
Sbjct: 835 RLQNELANSLLSGEFSESNVVRVDAHHG 862
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.138 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,407,646,037
Number of Sequences: 23463169
Number of extensions: 179479669
Number of successful extensions: 742360
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 12531
Number of HSP's successfully gapped in prelim test: 3265
Number of HSP's that attempted gapping in prelim test: 710110
Number of HSP's gapped (non-prelim): 20116
length of query: 287
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 146
effective length of database: 9,050,888,538
effective search space: 1321429726548
effective search space used: 1321429726548
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 76 (33.9 bits)