Query 047232
Match_columns 175
No_of_seqs 196 out of 1227
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 09:02:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047232.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/047232hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02216 protein SRG1 100.0 1.5E-48 3.3E-53 326.2 16.0 171 1-175 169-357 (357)
2 PLN03001 oxidoreductase, 2OG-F 100.0 1.7E-48 3.6E-53 313.6 15.2 170 1-174 76-261 (262)
3 PLN02947 oxidoreductase 100.0 6.3E-48 1.4E-52 323.9 16.7 171 1-175 182-371 (374)
4 PLN02639 oxidoreductase, 2OG-F 100.0 8.3E-48 1.8E-52 319.8 15.6 170 1-174 150-336 (337)
5 PLN02758 oxidoreductase, 2OG-F 100.0 1.3E-47 2.9E-52 321.0 16.5 171 1-175 171-359 (361)
6 PLN02912 oxidoreductase, 2OG-F 100.0 9.9E-48 2.1E-52 320.3 15.4 170 1-174 157-344 (348)
7 PLN02276 gibberellin 20-oxidas 100.0 1.1E-47 2.5E-52 321.4 14.1 169 2-174 167-351 (361)
8 PLN02254 gibberellin 3-beta-di 100.0 3E-47 6.5E-52 318.3 15.0 161 1-165 165-347 (358)
9 PLN03178 leucoanthocyanidin di 100.0 3.1E-47 6.7E-52 318.8 14.1 172 1-175 168-358 (360)
10 PLN02904 oxidoreductase 100.0 4.8E-47 1E-51 317.1 15.1 170 1-175 168-354 (357)
11 PLN02299 1-aminocyclopropane-1 100.0 2.8E-46 6.1E-51 308.6 14.7 171 1-175 115-308 (321)
12 PLN02393 leucoanthocyanidin di 100.0 4.6E-46 1E-50 311.8 15.7 171 1-175 170-360 (362)
13 PLN02997 flavonol synthase 100.0 9.2E-46 2E-50 305.9 15.6 158 1-162 141-316 (325)
14 PLN02750 oxidoreductase, 2OG-F 100.0 1.6E-45 3.5E-50 306.9 15.7 160 1-164 153-330 (345)
15 PLN03002 oxidoreductase, 2OG-F 100.0 2.1E-45 4.6E-50 304.7 15.2 162 1-166 140-324 (332)
16 PLN02365 2-oxoglutarate-depend 100.0 3.5E-45 7.6E-50 299.8 15.3 165 1-173 112-296 (300)
17 PLN02704 flavonol synthase 100.0 2.7E-45 5.8E-50 304.6 14.6 157 1-161 157-331 (335)
18 PLN02515 naringenin,2-oxogluta 100.0 9.9E-45 2.2E-49 303.1 16.5 160 1-165 155-332 (358)
19 PLN02156 gibberellin 2-beta-di 100.0 1.1E-44 2.5E-49 300.3 15.8 161 1-165 135-317 (335)
20 PLN00417 oxidoreductase, 2OG-F 100.0 1.1E-44 2.4E-49 302.0 14.4 168 1-174 162-347 (348)
21 PTZ00273 oxidase reductase; Pr 100.0 1.2E-44 2.7E-49 299.0 14.1 160 1-164 137-313 (320)
22 KOG0143 Iron/ascorbate family 100.0 4.6E-44 9.9E-49 295.1 16.0 167 1-172 135-320 (322)
23 PLN02984 oxidoreductase, 2OG-F 100.0 1.5E-43 3.2E-48 294.2 15.8 161 1-175 158-339 (341)
24 PLN02485 oxidoreductase 100.0 2.4E-43 5.2E-48 292.3 14.6 160 1-164 143-327 (329)
25 PLN02403 aminocyclopropanecarb 100.0 1.7E-42 3.7E-47 283.9 14.4 164 1-175 110-296 (303)
26 COG3491 PcbC Isopenicillin N s 100.0 5.8E-39 1.3E-43 257.6 13.4 145 2-150 135-297 (322)
27 PF03171 2OG-FeII_Oxy: 2OG-Fe( 99.8 1.6E-20 3.5E-25 129.6 6.2 79 41-122 2-98 (98)
28 PF13640 2OG-FeII_Oxy_3: 2OG-F 96.0 0.0088 1.9E-07 40.6 3.4 72 44-121 2-100 (100)
29 smart00702 P4Hc Prolyl 4-hydro 95.1 0.49 1.1E-05 35.5 10.6 100 11-121 58-178 (178)
30 PF12851 Tet_JBP: Oxygenase do 95.0 0.1 2.2E-06 39.6 6.4 64 58-121 85-170 (171)
31 PRK05467 Fe(II)-dependent oxyg 93.7 1.1 2.4E-05 35.5 10.0 45 77-121 129-177 (226)
32 PRK15401 alpha-ketoglutarate-d 90.0 6.8 0.00015 30.8 10.5 57 43-105 118-183 (213)
33 TIGR02466 conserved hypothetic 87.6 8.8 0.00019 29.8 9.6 34 86-119 159-197 (201)
34 PF13532 2OG-FeII_Oxy_2: 2OG-F 86.3 6.8 0.00015 29.5 8.4 60 42-107 98-166 (194)
35 PF13759 2OG-FeII_Oxy_5: Putat 83.0 2.3 5.1E-05 28.9 4.0 33 86-118 63-100 (101)
36 TIGR00568 alkb DNA alkylation 79.1 25 0.00054 26.5 9.0 56 43-104 97-161 (169)
37 PF08699 DUF1785: Domain of un 44.7 48 0.0011 19.8 3.7 24 78-102 19-42 (52)
38 PLN00052 prolyl 4-hydroxylase; 44.3 1.9E+02 0.004 24.1 8.6 36 89-124 206-254 (310)
39 PF02678 Pirin: Pirin; InterP 42.4 24 0.00053 24.5 2.4 19 56-74 40-58 (107)
40 PF01361 Tautomerase: Tautomer 41.2 45 0.00098 19.9 3.3 25 8-32 14-38 (60)
41 PF11876 DUF3396: Protein of u 39.1 12 0.00026 29.2 0.4 97 12-108 39-155 (208)
42 COG2140 Thermophilic glucose-6 38.7 96 0.0021 24.4 5.3 36 70-105 115-152 (209)
43 PRK02289 4-oxalocrotonate taut 38.2 52 0.0011 19.9 3.2 25 8-32 15-39 (60)
44 PF12791 RsgI_N: Anti-sigma fa 37.5 26 0.00056 21.0 1.7 24 82-108 10-34 (56)
45 smart00460 TGc Transglutaminas 35.9 37 0.0008 20.5 2.3 16 80-95 53-68 (68)
46 PRK01964 4-oxalocrotonate taut 35.3 58 0.0013 19.8 3.1 24 8-31 15-38 (64)
47 TIGR00370 conserved hypothetic 34.8 62 0.0013 25.1 3.8 40 67-107 158-200 (202)
48 cd00491 4Oxalocrotonate_Tautom 34.1 68 0.0015 18.8 3.2 24 8-31 14-37 (58)
49 PF11548 Receptor_IA-2: Protei 33.9 39 0.00084 22.9 2.2 33 13-45 18-51 (91)
50 PRK02220 4-oxalocrotonate taut 33.6 64 0.0014 19.2 3.1 24 8-31 15-38 (61)
51 TIGR00013 taut 4-oxalocrotonat 31.9 78 0.0017 18.9 3.3 24 8-31 15-38 (63)
52 PRK01271 4-oxalocrotonate taut 31.3 74 0.0016 20.7 3.2 25 8-32 16-40 (76)
53 PRK00745 4-oxalocrotonate taut 31.1 77 0.0017 18.9 3.1 25 8-32 15-39 (62)
54 PTZ00397 macrophage migration 28.8 78 0.0017 21.8 3.2 24 8-31 72-95 (116)
55 COG2879 Uncharacterized small 28.5 60 0.0013 20.4 2.2 21 146-166 38-58 (65)
56 PF08921 DUF1904: Domain of un 26.3 92 0.002 21.7 3.1 26 8-33 12-37 (108)
57 PF01187 MIF: Macrophage migra 24.7 1E+02 0.0022 21.3 3.2 24 8-31 70-93 (114)
58 PF06560 GPI: Glucose-6-phosph 23.8 1.6E+02 0.0034 22.6 4.3 47 67-121 92-145 (182)
59 PTZ00450 macrophage migration 23.5 1.1E+02 0.0024 21.3 3.2 24 8-31 72-95 (113)
60 TIGR01565 homeo_ZF_HD homeobox 23.5 54 0.0012 20.2 1.4 32 3-34 16-51 (58)
61 PF01104 Bunya_NS-S: Bunyaviru 23.1 2.5E+02 0.0054 19.0 5.4 45 85-137 41-85 (91)
62 PF10055 DUF2292: Uncharacteri 22.2 70 0.0015 18.0 1.5 13 64-76 13-25 (38)
63 PF02373 JmjC: JmjC domain, hy 21.6 91 0.002 20.8 2.4 33 76-108 77-110 (114)
64 COG1741 Pirin-related protein 21.0 2.2E+02 0.0048 23.3 4.9 30 57-86 56-91 (276)
65 PF11142 DUF2917: Protein of u 21.0 1.5E+02 0.0032 18.4 3.1 34 80-113 20-53 (63)
66 COG1942 Uncharacterized protei 20.7 1.3E+02 0.0027 19.2 2.7 22 10-31 18-39 (69)
No 1
>PLN02216 protein SRG1
Probab=100.00 E-value=1.5e-48 Score=326.17 Aligned_cols=171 Identities=32% Similarity=0.611 Sum_probs=159.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccC-CceeeEeeeCCCCCCCCCCccccCCCCCCceEEEec-CCCC
Q 047232 1 DIIVDHAKKTTELALTLFELISEALGLNANRLKDMDCA-EGLFLLGHYYPACPEPELTMGTDSHADTSFLTVLLQ-DRLG 78 (175)
Q Consensus 1 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~-~~~~l~~~~Yp~~~~~~~~~g~~~HtD~g~lTiL~q-d~~~ 78 (175)
+++++|+++|.+++.+|++++|++||+++++|.+.+.. ..+.+|++|||||++++..+|+++|||+|+||||+| ++++
T Consensus 169 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~lRl~~YPp~p~~~~~~G~~~HtD~g~lTlL~q~~~v~ 248 (357)
T PLN02216 169 DTLETYSAEVKSIAKILFAKMASALEIKPEEMEKLFDDDLGQSIRMNYYPPCPQPDQVIGLTPHSDAVGLTILLQVNEVE 248 (357)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhccCchheeEEeecCCCCCcccccCccCcccCceEEEEEecCCCC
Confidence 36899999999999999999999999999999887654 346799999999998888999999999999999999 5699
Q ss_pred CeeEeeCCeEEEEeecCCeEEEEecccccc----------------CCCCeEEEEEeeccCCCCCCceEeecCccccCCC
Q 047232 79 GLQVLHENEWVNVTPIHGALVVNLGDMMQA----------------NVGPRVSVACFFRSHFQSEKARLYGPINELLSEE 142 (175)
Q Consensus 79 GLqV~~~g~W~~V~p~~~~~vVniGd~le~----------------~~~~R~Si~~F~~p~~d~~~~~~i~pl~~~~~~~ 142 (175)
||||+++|+|++|+|+||++|||+||+||+ ..++|||++||+.|+. |++|+|+|++++++
T Consensus 249 GLQV~~~g~Wi~V~p~pgalvVNiGD~L~~~TNG~~kS~~HRVv~~~~~~R~Si~~F~~P~~----d~~i~p~~~lv~~~ 324 (357)
T PLN02216 249 GLQIKKDGKWVSVKPLPNALVVNVGDILEIITNGTYRSIEHRGVVNSEKERLSVATFHNTGM----GKEIGPAKSLVERQ 324 (357)
T ss_pred ceeEEECCEEEECCCCCCeEEEEcchhhHhhcCCeeeccCceeecCCCCCEEEEEEEecCCC----CCeEeCcHHHcCCC
Confidence 999999999999999999999999999998 3578999999999999 89999999999999
Q ss_pred CCCCCCCccHHHHHHHHHhcCCCCCCCccccCC
Q 047232 143 NPPIYKEITVKEYLSHSYSIGLDGTSPLDHFKL 175 (175)
Q Consensus 143 ~~~~y~~~~~~dy~~~~~~~~~~~~~~l~~~~~ 175 (175)
+|++|++++++||+..+++..+.++..++.++|
T Consensus 325 ~p~~Y~~~t~~ey~~~~~~~~~~~~~~~~~~~~ 357 (357)
T PLN02216 325 KAALFKSLTTKEYFDGLFSRELDGKAYLDAMRI 357 (357)
T ss_pred CCCCCCCcCHHHHHHHHHhcccCCcchhhhhcC
Confidence 999999999999999999999989999999886
No 2
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.7e-48 Score=313.63 Aligned_cols=170 Identities=35% Similarity=0.561 Sum_probs=157.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCCceeeEeeeCCCCCCCCCCccccCCCCCCceEEEecCCCCCe
Q 047232 1 DIIVDHAKKTTELALTLFELISEALGLNANRLKDMDCAEGLFLLGHYYPACPEPELTMGTDSHADTSFLTVLLQDRLGGL 80 (175)
Q Consensus 1 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~l~~~~Yp~~~~~~~~~g~~~HtD~g~lTiL~qd~~~GL 80 (175)
+++++|+++|.+++.+|++++|++||+++++|.+.+......+|++|||||+.++..+|+++|||+|+||||+||+++||
T Consensus 76 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~v~GL 155 (262)
T PLN03001 76 EVVGEYGDCMKALAQKLLAFISESLGLPCSCIEDAVGDFYQNITVSYYPPCPQPELTLGLQSHSDFGAITLLIQDDVEGL 155 (262)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcchhheeecCCCCCCcccccCCcCCcCCCeeEEEEeCCCCce
Confidence 46899999999999999999999999999999887766666799999999998888999999999999999999999999
Q ss_pred eEeeCCeEEEEeecCCeEEEEecccccc----------------CCCCeEEEEEeeccCCCCCCceEeecCccccCCCCC
Q 047232 81 QVLHENEWVNVTPIHGALVVNLGDMMQA----------------NVGPRVSVACFFRSHFQSEKARLYGPINELLSEENP 144 (175)
Q Consensus 81 qV~~~g~W~~V~p~~~~~vVniGd~le~----------------~~~~R~Si~~F~~p~~d~~~~~~i~pl~~~~~~~~~ 144 (175)
||+++|+|++|+|+||++|||+||+|++ ..++|||++||++|+. |++|+|+++++++++|
T Consensus 156 qV~~~g~Wi~V~p~p~a~vVNiGD~l~~~tng~~~S~~HRVv~~~~~~R~Sia~F~~p~~----d~~i~p~~e~v~~~~p 231 (262)
T PLN03001 156 QLLKDAEWLMVPPISDAILIIIADQTEIITNGNYKSAQHRAIANANKARLSVATFHDPAK----TAKIAPASALSTESFP 231 (262)
T ss_pred EEeeCCeEEECCCCCCcEEEEccHHHHHHhCCccccccceEEcCCCCCEEEEEEEEcCCC----CCEEeCChHhcCCCCC
Confidence 9999999999999999999999999998 3578999999999999 8999999999999999
Q ss_pred CCCCCccHHHHHHHHHhcCCCCCCCccccC
Q 047232 145 PIYKEITVKEYLSHSYSIGLDGTSPLDHFK 174 (175)
Q Consensus 145 ~~y~~~~~~dy~~~~~~~~~~~~~~l~~~~ 174 (175)
++|++++++||+..++++...++..++.+.
T Consensus 232 ~~y~~~~~~e~l~~~~~~~~~~~~~~~~~~ 261 (262)
T PLN03001 232 PRYCEIVYGEYVSSWYSKGPEGKRNIDALL 261 (262)
T ss_pred CcCCCccHHHHHHHHHHhccCCcchhhhhc
Confidence 999999999999999998777777776553
No 3
>PLN02947 oxidoreductase
Probab=100.00 E-value=6.3e-48 Score=323.86 Aligned_cols=171 Identities=40% Similarity=0.642 Sum_probs=157.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcCCCc---ccccccccCCceeeEeeeCCCCCCCCCCccccCCCCCCceEEEecCCC
Q 047232 1 DIIVDHAKKTTELALTLFELISEALGLNA---NRLKDMDCAEGLFLLGHYYPACPEPELTMGTDSHADTSFLTVLLQDRL 77 (175)
Q Consensus 1 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~---~~~~~~~~~~~~~l~~~~Yp~~~~~~~~~g~~~HtD~g~lTiL~qd~~ 77 (175)
+++++|+++|.+++.+|++++|++||+++ ++|.+.+....+.+|+||||||++++..+|+++|||+|+||||+||++
T Consensus 182 ~~~~~Y~~~~~~L~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lrln~YPp~p~~~~~~G~~~HTD~g~lTlL~Qd~v 261 (374)
T PLN02947 182 KVAATYAKATKRLFLELMEAILESLGIVKRGSDELLEEFEAGSQMMVVNCYPACPEPELTLGMPPHSDYGFLTLLLQDEV 261 (374)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCccchHHHHHHhcCcceeeeeecCCCCCCcccccCCCCccCCCceEEEEecCC
Confidence 36899999999999999999999999974 456555555667899999999999988999999999999999999999
Q ss_pred CCeeEeeCCeEEEEeecCCeEEEEecccccc----------------CCCCeEEEEEeeccCCCCCCceEeecCccccCC
Q 047232 78 GGLQVLHENEWVNVTPIHGALVVNLGDMMQA----------------NVGPRVSVACFFRSHFQSEKARLYGPINELLSE 141 (175)
Q Consensus 78 ~GLqV~~~g~W~~V~p~~~~~vVniGd~le~----------------~~~~R~Si~~F~~p~~d~~~~~~i~pl~~~~~~ 141 (175)
+||||+++|+|++|+|+||++|||+||+||+ ..++|||++||+.|+. |++|+|+++++++
T Consensus 262 ~GLQV~~~g~Wi~V~p~pga~VVNvGD~Lq~~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~----d~~i~Pl~~lv~~ 337 (374)
T PLN02947 262 EGLQIMHAGRWVTVEPIPGSFVVNVGDHLEIFSNGRYKSVLHRVRVNSTKPRISVASLHSLPF----ERVVGPAPELVDE 337 (374)
T ss_pred CCeeEeECCEEEeCCCCCCeEEEEeCceeeeeeCCEEeccccccccCCCCCEEEEEEEecCCC----CCEEeCChHhcCC
Confidence 9999999999999999999999999999998 3578999999999999 8999999999999
Q ss_pred CCCCCCCCccHHHHHHHHHhcCCCCCCCccccCC
Q 047232 142 ENPPIYKEITVKEYLSHSYSIGLDGTSPLDHFKL 175 (175)
Q Consensus 142 ~~~~~y~~~~~~dy~~~~~~~~~~~~~~l~~~~~ 175 (175)
++|++|++++++||++.+.+....+++.++.+||
T Consensus 338 ~~p~~Y~~~~~~ey~~~~~~~~~~~~~~l~~~~~ 371 (374)
T PLN02947 338 QNPRRYMDTDFATFLAYLASAEGKHKNFLESRKL 371 (374)
T ss_pred CCCCcCCCCCHHHHHHHHHHhccCchhhhhhhhc
Confidence 9999999999999999999998888999988775
No 4
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=8.3e-48 Score=319.80 Aligned_cols=170 Identities=39% Similarity=0.669 Sum_probs=158.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCCceeeEeeeCCCCCCCCCCccccCCCCCCceEEEecC-CCCC
Q 047232 1 DIIVDHAKKTTELALTLFELISEALGLNANRLKDMDCAEGLFLLGHYYPACPEPELTMGTDSHADTSFLTVLLQD-RLGG 79 (175)
Q Consensus 1 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~l~~~~Yp~~~~~~~~~g~~~HtD~g~lTiL~qd-~~~G 79 (175)
+++++|+++|.+++.+|++++|++||+++++|++.+....+.+|++|||||++++..+|+++|||+|+||||+|| +++|
T Consensus 150 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HTD~g~lTlL~qd~~v~G 229 (337)
T PLN02639 150 EIVSTYCREVRELGFRLQEAISESLGLEKDYIKNVLGEQGQHMAVNYYPPCPEPELTYGLPAHTDPNALTILLQDQQVAG 229 (337)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhCCCccEEEEEcCCCCCCcccccCCCCCcCCCceEEEEecCCcCc
Confidence 368999999999999999999999999999998877777778999999999988888999999999999999998 4999
Q ss_pred eeEeeCCeEEEEeecCCeEEEEecccccc----------------CCCCeEEEEEeeccCCCCCCceEeecCccccCCCC
Q 047232 80 LQVLHENEWVNVTPIHGALVVNLGDMMQA----------------NVGPRVSVACFFRSHFQSEKARLYGPINELLSEEN 143 (175)
Q Consensus 80 LqV~~~g~W~~V~p~~~~~vVniGd~le~----------------~~~~R~Si~~F~~p~~d~~~~~~i~pl~~~~~~~~ 143 (175)
|||+++|+|++|+|+||++|||+||+|++ ..++|||++||++|+. |++|+|+|+++++++
T Consensus 230 LQV~~~g~Wi~V~p~pg~lVVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Sia~F~~p~~----d~~i~pl~~~~~~~~ 305 (337)
T PLN02639 230 LQVLKDGKWVAVNPHPGAFVINIGDQLQALSNGRYKSVWHRAVVNTDKERMSVASFLCPCD----DAVISPAKKLTDDGT 305 (337)
T ss_pred eEeecCCeEEeccCCCCeEEEechhHHHHHhCCeeeccCcccccCCCCCEEEEEEEecCCC----CceEeCchHHcCCCC
Confidence 99998999999999999999999999998 3578999999999999 899999999999999
Q ss_pred CCCCCCccHHHHHHHHHhcCCCCCCCccccC
Q 047232 144 PPIYKEITVKEYLSHSYSIGLDGTSPLDHFK 174 (175)
Q Consensus 144 ~~~y~~~~~~dy~~~~~~~~~~~~~~l~~~~ 174 (175)
|++|+|++++||++.++.....+++.|+.++
T Consensus 306 p~~y~p~~~~e~~~~~~~~~~~~~~~l~~~~ 336 (337)
T PLN02639 306 AAVYRDFTYAEYYKKFWSRNLDQEHCLELFK 336 (337)
T ss_pred CCCCCCCCHHHHHHHHHhccCCCchhhHhhc
Confidence 9999999999999999998888888887764
No 5
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.3e-47 Score=320.96 Aligned_cols=171 Identities=33% Similarity=0.603 Sum_probs=159.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCCceeeEeeeCCCCCCCCCCccccCCCCCCceEEEecCC--CC
Q 047232 1 DIIVDHAKKTTELALTLFELISEALGLNANRLKDMDCAEGLFLLGHYYPACPEPELTMGTDSHADTSFLTVLLQDR--LG 78 (175)
Q Consensus 1 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~l~~~~Yp~~~~~~~~~g~~~HtD~g~lTiL~qd~--~~ 78 (175)
+++++|+++|.+++..|+++++++||+++++|.+.+....+.+|++|||+|+.++..+|+++|||+|+||||+||+ ++
T Consensus 171 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lR~~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~~~v~ 250 (361)
T PLN02758 171 ETLEVYSREIRELCQRLLKYIAMTLGLKEDRFEEMFGEAVQAVRMNYYPPCSRPDLVLGLSPHSDGSALTVLQQGKGSCV 250 (361)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhHHHhcCccceeeeecCCCCCCcccccCccCccCCceeEEEEeCCCCCC
Confidence 4689999999999999999999999999999998777777789999999999888899999999999999999984 89
Q ss_pred CeeEeeCCeEEEEeecCCeEEEEecccccc----------------CCCCeEEEEEeeccCCCCCCceEeecCccccCCC
Q 047232 79 GLQVLHENEWVNVTPIHGALVVNLGDMMQA----------------NVGPRVSVACFFRSHFQSEKARLYGPINELLSEE 142 (175)
Q Consensus 79 GLqV~~~g~W~~V~p~~~~~vVniGd~le~----------------~~~~R~Si~~F~~p~~d~~~~~~i~pl~~~~~~~ 142 (175)
||||+++|+|++|+|+||++|||+||+||+ ..++|||++||++|+. |++|+|+|++++++
T Consensus 251 GLQV~~~g~Wi~V~p~pgalVVNiGD~L~~~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~----d~~i~pl~elv~~~ 326 (361)
T PLN02758 251 GLQILKDNTWVPVHPVPNALVINIGDTLEVLTNGKYKSVEHRAVTNKEKDRLSIVTFYAPSY----EVELGPMPELVDDE 326 (361)
T ss_pred CeeeeeCCEEEeCCCCCCeEEEEccchhhhhcCCeeecccceeecCCCCCEEEEEEEecCCC----CCeEeCCHHHcCCC
Confidence 999999999999999999999999999998 3578999999999999 89999999999999
Q ss_pred CCCCCCCccHHHHHHHHHhcCCCCCCCccccCC
Q 047232 143 NPPIYKEITVKEYLSHSYSIGLDGTSPLDHFKL 175 (175)
Q Consensus 143 ~~~~y~~~~~~dy~~~~~~~~~~~~~~l~~~~~ 175 (175)
+|++|++++++||+..++++...++..++.+++
T Consensus 327 ~p~~Y~~~~~~ey~~~~~~~~~~~~~~~~~~~~ 359 (361)
T PLN02758 327 NPCKYRRYNHGEYSRHYVTSKLQGKKTLEFAKI 359 (361)
T ss_pred CCCcCCCccHHHHHHHHHhcccCchhhhhhhcc
Confidence 999999999999999999998888888887764
No 6
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=9.9e-48 Score=320.33 Aligned_cols=170 Identities=38% Similarity=0.696 Sum_probs=158.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCCceeeEeeeCCCCCCCCCCccccCCCCCCceEEEecCCCCCe
Q 047232 1 DIIVDHAKKTTELALTLFELISEALGLNANRLKDMDCAEGLFLLGHYYPACPEPELTMGTDSHADTSFLTVLLQDRLGGL 80 (175)
Q Consensus 1 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~l~~~~Yp~~~~~~~~~g~~~HtD~g~lTiL~qd~~~GL 80 (175)
+++++|+++|.+++.+|++++|++||+++++|++.+....+.+|++|||||+.++..+|+++|||+|+||||+||+++||
T Consensus 157 ~~~~~y~~~~~~l~~~il~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YPp~~~~~~~~G~~~HtD~g~lTlL~Qd~v~GL 236 (348)
T PLN02912 157 EVTAEYATSVRALVLTLLEAISESLGLEKDRVSNTLGKHGQHMAINYYPPCPQPELTYGLPGHKDANLITVLLQDEVSGL 236 (348)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCccceeeeeecCCCCChhhcCCcCCCcCCCceEEEEECCCCce
Confidence 46899999999999999999999999999999987776677899999999998878899999999999999999999999
Q ss_pred eEeeCCeEEEEeecCCeEEEEecccccc----------------CCCCeEEEEEeeccCCCCCCceEeecCccccCCC--
Q 047232 81 QVLHENEWVNVTPIHGALVVNLGDMMQA----------------NVGPRVSVACFFRSHFQSEKARLYGPINELLSEE-- 142 (175)
Q Consensus 81 qV~~~g~W~~V~p~~~~~vVniGd~le~----------------~~~~R~Si~~F~~p~~d~~~~~~i~pl~~~~~~~-- 142 (175)
||+++|+|++|+|+||++|||+||+|++ ..++|||++||++|+. |++|+|+|++++++
T Consensus 237 QV~~~g~Wi~V~p~pgalvVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Sia~F~~p~~----d~~i~pl~~~v~~~~~ 312 (348)
T PLN02912 237 QVFKDGKWIAVNPIPNTFIVNLGDQMQVISNDKYKSVLHRAVVNTDKERISIPTFYCPSE----DAVIGPAQELINEEED 312 (348)
T ss_pred EEEECCcEEECCCcCCeEEEEcCHHHHHHhCCEEEcccccccCCCCCCEEEEEEEecCCC----CCeEeCCHHHhCcCCC
Confidence 9999999999999999999999999998 4578999999999999 89999999999875
Q ss_pred CCCCCCCccHHHHHHHHHhcCCCCCCCccccC
Q 047232 143 NPPIYKEITVKEYLSHSYSIGLDGTSPLDHFK 174 (175)
Q Consensus 143 ~~~~y~~~~~~dy~~~~~~~~~~~~~~l~~~~ 174 (175)
+|++|++++++||+..+++..+.+++.|+.+|
T Consensus 313 ~p~~y~~~~~~ey~~~~~~~~~~~~~~l~~~~ 344 (348)
T PLN02912 313 SLAIYRNFTYAEYFEKFWDTAFATESCIDSFK 344 (348)
T ss_pred CCCCCCCCcHHHHHHHHHhcccCCcchhhhhh
Confidence 48999999999999999998888888888776
No 7
>PLN02276 gibberellin 20-oxidase
Probab=100.00 E-value=1.1e-47 Score=321.41 Aligned_cols=169 Identities=33% Similarity=0.557 Sum_probs=157.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCCceeeEeeeCCCCCCCCCCccccCCCCCCceEEEecCCCCCee
Q 047232 2 IIVDHAKKTTELALTLFELISEALGLNANRLKDMDCAEGLFLLGHYYPACPEPELTMGTDSHADTSFLTVLLQDRLGGLQ 81 (175)
Q Consensus 2 ~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~l~~~~Yp~~~~~~~~~g~~~HtD~g~lTiL~qd~~~GLq 81 (175)
++++|+.+|.+++..||+++|++||+++++|++.+....+.+|++|||||+.++..+|+++|||+|+||||+||+++|||
T Consensus 167 ~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HTD~g~lTlL~Qd~v~GLQ 246 (361)
T PLN02276 167 VYQEYCEAMKTLSLKIMELLGISLGVDRGYYRKFFEDGDSIMRCNYYPPCQEPELTLGTGPHCDPTSLTILHQDQVGGLQ 246 (361)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCccceeeeEeCCCCCCcccccCCccccCCceeEEEEecCCCceE
Confidence 68899999999999999999999999999999877777788999999999988888999999999999999999999999
Q ss_pred EeeCCeEEEEeecCCeEEEEecccccc----------------CCCCeEEEEEeeccCCCCCCceEeecCccccCCCCCC
Q 047232 82 VLHENEWVNVTPIHGALVVNLGDMMQA----------------NVGPRVSVACFFRSHFQSEKARLYGPINELLSEENPP 145 (175)
Q Consensus 82 V~~~g~W~~V~p~~~~~vVniGd~le~----------------~~~~R~Si~~F~~p~~d~~~~~~i~pl~~~~~~~~~~ 145 (175)
|+.+|+|++|+|+||++|||+||+|++ ..++|||++||++|+. |++|.|+++++++++|+
T Consensus 247 V~~~g~Wi~V~p~pgalVVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Sia~F~~P~~----d~~i~pl~~~v~~~~p~ 322 (361)
T PLN02276 247 VFVDNKWRSVRPRPGALVVNIGDTFMALSNGRYKSCLHRAVVNSERERRSLAFFLCPKE----DKVVRPPQELVDREGPR 322 (361)
T ss_pred EEECCEEEEcCCCCCeEEEEcHHHHHHHhCCccccccceeecCCCCCEEEEEEEecCCC----CCEEeCChHhcCCCCCC
Confidence 999999999999999999999999998 4578999999999999 89999999999999999
Q ss_pred CCCCccHHHHHHHHHhcCCCCCCCccccC
Q 047232 146 IYKEITVKEYLSHSYSIGLDGTSPLDHFK 174 (175)
Q Consensus 146 ~y~~~~~~dy~~~~~~~~~~~~~~l~~~~ 174 (175)
+|++++++||++.+.+....+++.|+.++
T Consensus 323 ~y~~~~~~ey~~~~~~~~~~~~~~l~~~~ 351 (361)
T PLN02276 323 KYPDFTWSDLLEFTQKHYRADMNTLQAFS 351 (361)
T ss_pred cCCCCCHHHHHHHHHHhcccchhHHHHHH
Confidence 99999999999999988777777776543
No 8
>PLN02254 gibberellin 3-beta-dioxygenase
Probab=100.00 E-value=3e-47 Score=318.30 Aligned_cols=161 Identities=34% Similarity=0.597 Sum_probs=148.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccc-----cCCceeeEeeeCCCCCCCCCCccccCCCCCCceEEEecC
Q 047232 1 DIIVDHAKKTTELALTLFELISEALGLNANRLKDMD-----CAEGLFLLGHYYPACPEPELTMGTDSHADTSFLTVLLQD 75 (175)
Q Consensus 1 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~-----~~~~~~l~~~~Yp~~~~~~~~~g~~~HtD~g~lTiL~qd 75 (175)
+++++|+++|.+++++|+++||++||+++++|.+.+ ....+.+|+||||||++++..+|+++|||+|+||||+||
T Consensus 165 ~~~~~Y~~~~~~L~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~~~lRl~~YPp~p~~~~~~G~~~HtD~g~lTiL~Qd 244 (358)
T PLN02254 165 DVMEEYQKEMKKLAERLMWLMLGSLGITEEDIKWAGPKSGSQGAQAALQLNSYPVCPDPDRAMGLAPHTDSSLLTILYQS 244 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhhcccccCcceeEEEecCCCCCCcccccCcCCccCCCcEEEEecC
Confidence 368999999999999999999999999998887644 344568999999999988889999999999999999999
Q ss_pred CCCCeeEeeCC-eEEEEeecCCeEEEEecccccc----------------CCCCeEEEEEeeccCCCCCCceEeecCccc
Q 047232 76 RLGGLQVLHEN-EWVNVTPIHGALVVNLGDMMQA----------------NVGPRVSVACFFRSHFQSEKARLYGPINEL 138 (175)
Q Consensus 76 ~~~GLqV~~~g-~W~~V~p~~~~~vVniGd~le~----------------~~~~R~Si~~F~~p~~d~~~~~~i~pl~~~ 138 (175)
+++||||+++| +|++|+|+||++|||+||+||+ ..++|||++||++|+. |++|+|++++
T Consensus 245 ~v~GLQV~~~~~~Wi~V~p~pgalVVNiGD~lq~~SNg~~kS~~HRVv~~~~~~R~Sia~F~~P~~----d~~i~pl~~l 320 (358)
T PLN02254 245 NTSGLQVFREGVGWVTVPPVPGSLVVNVGDLLHILSNGRFPSVLHRAVVNKTRHRISVAYFYGPPS----DVQISPLPKL 320 (358)
T ss_pred CCCCceEECCCCEEEEcccCCCCEEEEhHHHHHHHhCCeeccccceeecCCCCCEEEEEEEecCCC----CcEEeCcHHh
Confidence 99999999875 8999999999999999999998 3578999999999999 8999999999
Q ss_pred cCCCCCCCCCCccHHHHHHHHHhcCCC
Q 047232 139 LSEENPPIYKEITVKEYLSHSYSIGLD 165 (175)
Q Consensus 139 ~~~~~~~~y~~~~~~dy~~~~~~~~~~ 165 (175)
+++++|++|++++++||+..+++....
T Consensus 321 v~~~~p~~Y~~~t~~ey~~~~~~~~~~ 347 (358)
T PLN02254 321 VDPNHPPLYRSVTWKEYLATKAKHFNK 347 (358)
T ss_pred cCCCCCcccCCcCHHHHHHHHHHhhhh
Confidence 999999999999999999999877654
No 9
>PLN03178 leucoanthocyanidin dioxygenase; Provisional
Probab=100.00 E-value=3.1e-47 Score=318.78 Aligned_cols=172 Identities=30% Similarity=0.499 Sum_probs=157.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccC---CceeeEeeeCCCCCCCCCCccccCCCCCCceEEEecCCC
Q 047232 1 DIIVDHAKKTTELALTLFELISEALGLNANRLKDMDCA---EGLFLLGHYYPACPEPELTMGTDSHADTSFLTVLLQDRL 77 (175)
Q Consensus 1 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~---~~~~l~~~~Yp~~~~~~~~~g~~~HtD~g~lTiL~qd~~ 77 (175)
+++++|+++|.+++.+|++++|++||+++++|.+.+.. ..+.+|++|||+|+.++..+|+++|||+|+||||+||++
T Consensus 168 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HTD~g~lTlL~qd~v 247 (360)
T PLN03178 168 PATSEYSRSLRSLATKLLAILSLGLGLPEDRLEKEVGGLEELLLQMKINYYPRCPQPDLALGVEAHTDVSALTFILHNMV 247 (360)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcccchhhhheeccCCCCCCccccCcCCccCCCceEEEeeCCC
Confidence 36899999999999999999999999999999986652 345789999999998888999999999999999999999
Q ss_pred CCeeEeeCCeEEEEeecCCeEEEEecccccc----------------CCCCeEEEEEeeccCCCCCCceEeecCccccCC
Q 047232 78 GGLQVLHENEWVNVTPIHGALVVNLGDMMQA----------------NVGPRVSVACFFRSHFQSEKARLYGPINELLSE 141 (175)
Q Consensus 78 ~GLqV~~~g~W~~V~p~~~~~vVniGd~le~----------------~~~~R~Si~~F~~p~~d~~~~~~i~pl~~~~~~ 141 (175)
+||||+++|+|++|+|.||++|||+||+||+ ...+|||++||++|+.| ..++.|+|+++++
T Consensus 248 ~GLQV~~~g~Wi~V~p~pg~lvVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Si~~F~~P~~d---~~v~~pl~~~v~~ 324 (360)
T PLN03178 248 PGLQVLYEGKWVTAKCVPDSIVVHIGDTLEILSNGRYKSILHRGLVNKEKVRISWAVFCEPPKE---KIILKPLPELVSK 324 (360)
T ss_pred CceeEeECCEEEEcCCCCCeEEEEccHHHHHHhCCccccccceeecCCCCCeEEEEEEecCCcc---cccccCcHHHcCC
Confidence 9999999999999999999999999999998 35679999999999983 2456999999999
Q ss_pred CCCCCCCCccHHHHHHHHHhcCCCCCCCccccCC
Q 047232 142 ENPPIYKEITVKEYLSHSYSIGLDGTSPLDHFKL 175 (175)
Q Consensus 142 ~~~~~y~~~~~~dy~~~~~~~~~~~~~~l~~~~~ 175 (175)
++|++|+|++++||+..++...+.+++.++.++|
T Consensus 325 ~~p~~y~p~~~~eyl~~~~~~~~~~~~~~~~~~~ 358 (360)
T PLN03178 325 EEPPKFPPRTFGQHVSHKLFKKPQDERNIDAADI 358 (360)
T ss_pred CCcccCCCccHHHHHHHHHhcccCcchhHhHHhc
Confidence 8999999999999999999999889999988876
No 10
>PLN02904 oxidoreductase
Probab=100.00 E-value=4.8e-47 Score=317.06 Aligned_cols=170 Identities=34% Similarity=0.521 Sum_probs=157.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCCceeeEeeeCCCCCCCCCCccccCCCCCCceEEEecCCCCCe
Q 047232 1 DIIVDHAKKTTELALTLFELISEALGLNANRLKDMDCAEGLFLLGHYYPACPEPELTMGTDSHADTSFLTVLLQDRLGGL 80 (175)
Q Consensus 1 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~l~~~~Yp~~~~~~~~~g~~~HtD~g~lTiL~qd~~~GL 80 (175)
+++++|+++|.+++.+|++++|++||+++++|.+.+....+.+|++|||||+.++..+|+++|||+|+||||+|+ .+||
T Consensus 168 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YPp~p~~~~~~g~~~HtD~g~lTlL~qd-~~GL 246 (357)
T PLN02904 168 EKVGKYAEATHVLHKQLIEAISESLGLEKNYLQEEIEEGSQVMAVNCYPACPEPEIALGMPPHSDFGSLTILLQS-SQGL 246 (357)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcccEEEeeecCCCCCcccccCCcCccCCCceEEEecC-CCee
Confidence 368999999999999999999999999999998877666678999999999988888999999999999999997 5899
Q ss_pred eEee-CCeEEEEeecCCeEEEEecccccc----------------CCCCeEEEEEeeccCCCCCCceEeecCccccCCCC
Q 047232 81 QVLH-ENEWVNVTPIHGALVVNLGDMMQA----------------NVGPRVSVACFFRSHFQSEKARLYGPINELLSEEN 143 (175)
Q Consensus 81 qV~~-~g~W~~V~p~~~~~vVniGd~le~----------------~~~~R~Si~~F~~p~~d~~~~~~i~pl~~~~~~~~ 143 (175)
||++ +|+|++|+|+||++|||+||+||+ ..++|||++||+.|+. |++|+|+|+++++++
T Consensus 247 QV~~~~g~Wi~V~p~pgalVVNiGD~Le~~TNG~~kSt~HRVv~~~~~~R~Si~~F~~p~~----d~~i~Pl~~~v~~~~ 322 (357)
T PLN02904 247 QIMDCNKNWVCVPYIEGALIVQLGDQVEVMSNGIYKSVVHRVTVNKDYKRLSFASLHSLPL----HKKISPAPELVNENK 322 (357)
T ss_pred eEEeCCCCEEECCCCCCeEEEEccHHHHHHhCCeeeccCCcccCCCCCCEEEEEEeecCCC----CCeEeCCHHHcCCCC
Confidence 9997 599999999999999999999998 3578999999999999 899999999999999
Q ss_pred CCCCCCccHHHHHHHHHhcCCCCCCCccccCC
Q 047232 144 PPIYKEITVKEYLSHSYSIGLDGTSPLDHFKL 175 (175)
Q Consensus 144 ~~~y~~~~~~dy~~~~~~~~~~~~~~l~~~~~ 175 (175)
|++|++++++||++.++++...+++.++.+++
T Consensus 323 p~~Y~~~~~~ey~~~~~~~~~~~~~~~~~~~~ 354 (357)
T PLN02904 323 PAAYGEFSFNDFLDYISSNDITQERFIDTLKK 354 (357)
T ss_pred CCcCCCCCHHHHHHHHHhcccCcchHHHHhcc
Confidence 99999999999999999999888888877653
No 11
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase
Probab=100.00 E-value=2.8e-46 Score=308.62 Aligned_cols=171 Identities=29% Similarity=0.556 Sum_probs=152.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccC---CceeeEeeeCCCCCCCCCCccccCCCCCCceEEEecC-C
Q 047232 1 DIIVDHAKKTTELALTLFELISEALGLNANRLKDMDCA---EGLFLLGHYYPACPEPELTMGTDSHADTSFLTVLLQD-R 76 (175)
Q Consensus 1 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~---~~~~l~~~~Yp~~~~~~~~~g~~~HtD~g~lTiL~qd-~ 76 (175)
+++++|+++|.+++.+|++++|++||+++++|++.+.. ....+|++|||||+.++...|+++|||+|+||||+|| +
T Consensus 115 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lRl~~YPp~~~~~~~~G~~~HTD~g~lTlL~qd~~ 194 (321)
T PLN02299 115 KVMKDFALELEKLAEELLDLLCENLGLEKGYLKKAFHGSKGPTFGTKVSNYPPCPKPDLVKGLRAHTDAGGIILLFQDDK 194 (321)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCCCCccceeeeEecCCCCCcccccCccCccCCCeEEEEEecCC
Confidence 46899999999999999999999999999999875532 3456899999999988878899999999999999997 5
Q ss_pred CCCeeEeeCCeEEEEeecCCeEEEEecccccc----------------CCCCeEEEEEeeccCCCCCCceEeecCccccC
Q 047232 77 LGGLQVLHENEWVNVTPIHGALVVNLGDMMQA----------------NVGPRVSVACFFRSHFQSEKARLYGPINELLS 140 (175)
Q Consensus 77 ~~GLqV~~~g~W~~V~p~~~~~vVniGd~le~----------------~~~~R~Si~~F~~p~~d~~~~~~i~pl~~~~~ 140 (175)
++||||+++|+|++|+|.||++|||+||+||+ ...+|||++||++|+. |++|+|+|++++
T Consensus 195 v~GLQV~~~g~Wi~V~p~pg~lvVNiGD~l~~~Tng~~kS~~HRVv~~~~~~R~Si~~F~~p~~----d~~i~pl~~~v~ 270 (321)
T PLN02299 195 VSGLQLLKDGEWVDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVVAQTDGNRMSIASFYNPGS----DAVIYPAPALVE 270 (321)
T ss_pred CCCcCcccCCeEEECCCCCCeEEEEeCHHHHHHhCCceecccceeecCCCCCEEEEEEEecCCC----CceEeCchHhcC
Confidence 99999998899999999999999999999998 3567999999999998 899999999998
Q ss_pred CC--CCCCCCCccHHHHHHHHHhcCCCCC-CCccccCC
Q 047232 141 EE--NPPIYKEITVKEYLSHSYSIGLDGT-SPLDHFKL 175 (175)
Q Consensus 141 ~~--~~~~y~~~~~~dy~~~~~~~~~~~~-~~l~~~~~ 175 (175)
++ +|++|+|++++||++.++++...++ ..++.+++
T Consensus 271 ~~~~~p~~y~p~~~~e~l~~~~~~~~~~~~~~~~~~~~ 308 (321)
T PLN02299 271 KEAEEEQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKA 308 (321)
T ss_pred cccCCCcCCCCCcHHHHHHHHHHcccCCccchhhhhhc
Confidence 65 5799999999999999999877664 66766553
No 12
>PLN02393 leucoanthocyanidin dioxygenase like protein
Probab=100.00 E-value=4.6e-46 Score=311.83 Aligned_cols=171 Identities=33% Similarity=0.637 Sum_probs=156.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCC---ceeeEeeeCCCCCCCCCCccccCCCCCCceEEEecC-C
Q 047232 1 DIIVDHAKKTTELALTLFELISEALGLNANRLKDMDCAE---GLFLLGHYYPACPEPELTMGTDSHADTSFLTVLLQD-R 76 (175)
Q Consensus 1 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~---~~~l~~~~Yp~~~~~~~~~g~~~HtD~g~lTiL~qd-~ 76 (175)
+++++|+++|.+++.+|++++|++||+++++|.+.+... ...+|++|||+|++++..+|+++|||+|+||||+|+ +
T Consensus 170 ~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lRl~~YP~~p~~~~~~g~~~HtD~g~lTlL~q~~~ 249 (362)
T PLN02393 170 ELIEEYGEEVVKLCGRLMKVLSVNLGLEEDRLQNAFGGEDGVGACLRVNYYPKCPQPDLTLGLSPHSDPGGMTILLPDDN 249 (362)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhCCCccccceeeeeecCCCCCcccccccccccCCceEEEEeeCCC
Confidence 368999999999999999999999999999998865432 368999999999988888999999999999999984 6
Q ss_pred CCCeeEeeCCeEEEEeecCCeEEEEecccccc----------------CCCCeEEEEEeeccCCCCCCceEeecCccccC
Q 047232 77 LGGLQVLHENEWVNVTPIHGALVVNLGDMMQA----------------NVGPRVSVACFFRSHFQSEKARLYGPINELLS 140 (175)
Q Consensus 77 ~~GLqV~~~g~W~~V~p~~~~~vVniGd~le~----------------~~~~R~Si~~F~~p~~d~~~~~~i~pl~~~~~ 140 (175)
++||||+++|+|++|+|.||++|||+||+||+ ..++|||++||++|+. |++|.|+|++++
T Consensus 250 v~GLQV~~~g~W~~V~p~pgalVVNiGD~l~~~Tng~~kSt~HRVv~~~~~~R~SiafF~~P~~----d~~i~pl~~~v~ 325 (362)
T PLN02393 250 VAGLQVRRDDAWITVKPVPDAFIVNIGDQIQVLSNAIYKSVEHRVIVNSAKERVSLAFFYNPKS----DLPIEPLKELVT 325 (362)
T ss_pred CCcceeeECCEEEECCCCCCeEEEEcchhhHhhcCCeeeccceecccCCCCCEEEEEEEecCCC----CceEeCcHHhcC
Confidence 99999999999999999999999999999998 3568999999999999 899999999999
Q ss_pred CCCCCCCCCccHHHHHHHHHhcCCCCCCCccccCC
Q 047232 141 EENPPIYKEITVKEYLSHSYSIGLDGTSPLDHFKL 175 (175)
Q Consensus 141 ~~~~~~y~~~~~~dy~~~~~~~~~~~~~~l~~~~~ 175 (175)
+++|++|++++++||+..+.++...+++.++.+|+
T Consensus 326 ~~~p~~y~~~~~~ey~~~~~~~~~~~~~~~~~~~~ 360 (362)
T PLN02393 326 PDRPALYPPMTFDEYRLFIRTKGPRGKSQVESLKS 360 (362)
T ss_pred CCCCCCCCCccHHHHHHHHHhcccCcchHHhhhcc
Confidence 99999999999999999999888878887877664
No 13
>PLN02997 flavonol synthase
Probab=100.00 E-value=9.2e-46 Score=305.91 Aligned_cols=158 Identities=25% Similarity=0.494 Sum_probs=146.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCC--ceeeEeeeCCCCCCCCCCccccCCCCCCceEEEecCCCC
Q 047232 1 DIIVDHAKKTTELALTLFELISEALGLNANRLKDMDCAE--GLFLLGHYYPACPEPELTMGTDSHADTSFLTVLLQDRLG 78 (175)
Q Consensus 1 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~--~~~l~~~~Yp~~~~~~~~~g~~~HtD~g~lTiL~qd~~~ 78 (175)
+++++|++.|.+++.+|++++|++||+++++|.+.+... ...+|++|||||+.++..+|+++|||+|+||||+||+++
T Consensus 141 ~~~~~y~~~~~~l~~~ll~~ia~~Lgl~~~~f~~~~~~~~~~~~lRl~~YP~~~~~~~~~g~~~HTD~g~lTlL~Qd~v~ 220 (325)
T PLN02997 141 EVTEEYTKHMKRLTEKILGWLSEGLGLPRETFTQSIGGETAEYVLRVNFYPPTQDTELVIGAAAHSDMGAIALLIPNEVP 220 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCCcccceeeeecCCCCCCcccccCccCccCCCceEEEecCCCC
Confidence 468999999999999999999999999999998866533 347999999999988888999999999999999999999
Q ss_pred CeeEeeCCeEEEEeecCCeEEEEecccccc----------------CCCCeEEEEEeeccCCCCCCceEeecCccccCCC
Q 047232 79 GLQVLHENEWVNVTPIHGALVVNLGDMMQA----------------NVGPRVSVACFFRSHFQSEKARLYGPINELLSEE 142 (175)
Q Consensus 79 GLqV~~~g~W~~V~p~~~~~vVniGd~le~----------------~~~~R~Si~~F~~p~~d~~~~~~i~pl~~~~~~~ 142 (175)
||||+++|+|++|+|.||++|||+||+||+ ....|||++||++|+. |++|+|+|++++++
T Consensus 221 GLQV~~~g~Wi~V~p~pgalvVNiGD~Le~~TNG~~kSt~HRVv~~~~~~R~Si~fF~~P~~----d~~i~Plp~~v~~~ 296 (325)
T PLN02997 221 GLQAFKDEQWLDLNYINSAVVVIIGDQLMRMTNGRFKNVLHRAKTDKERLRISWPVFVAPRA----DMSVGPLPELTGDE 296 (325)
T ss_pred CEEEeECCcEEECCCCCCeEEEEechHHHHHhCCccccccceeeCCCCCCEEEEEEEecCCC----CCeEeCChHHcCCC
Confidence 999999999999999999999999999998 3467999999999999 89999999999999
Q ss_pred CCCCCCCccHHHHHHHHHhc
Q 047232 143 NPPIYKEITVKEYLSHSYSI 162 (175)
Q Consensus 143 ~~~~y~~~~~~dy~~~~~~~ 162 (175)
+|++|++++++||+..+++.
T Consensus 297 ~p~~y~~~~~~e~l~~r~~~ 316 (325)
T PLN02997 297 NPPKFETLIYNDYIDQKIRG 316 (325)
T ss_pred CCCcCCCccHHHHHHHHHhh
Confidence 99999999999999998774
No 14
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.6e-45 Score=306.91 Aligned_cols=160 Identities=36% Similarity=0.626 Sum_probs=149.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCCceeeEeeeCCCCCCCCCCccccCCCCCCceEEEecCCCCCe
Q 047232 1 DIIVDHAKKTTELALTLFELISEALGLNANRLKDMDCAEGLFLLGHYYPACPEPELTMGTDSHADTSFLTVLLQDRLGGL 80 (175)
Q Consensus 1 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~l~~~~Yp~~~~~~~~~g~~~HtD~g~lTiL~qd~~~GL 80 (175)
+++++|++.|.+++..|++++|++||+++++|++.+....+.+|++|||||+.++..+|+++|||+|+||||+||+++||
T Consensus 153 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lR~~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GL 232 (345)
T PLN02750 153 ELCQEYARQVEKLAFKLLELISLSLGLPADRLNGYFKDQISFARFNHYPPCPAPHLALGVGRHKDGGALTVLAQDDVGGL 232 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcceEEEEEecCCCCCcccccCcCCCCCCCeEEEEecCCCCce
Confidence 36899999999999999999999999999999988777778899999999988777899999999999999999999999
Q ss_pred eEee--CCeEEEEeecCCeEEEEecccccc----------------CCCCeEEEEEeeccCCCCCCceEeecCccccCCC
Q 047232 81 QVLH--ENEWVNVTPIHGALVVNLGDMMQA----------------NVGPRVSVACFFRSHFQSEKARLYGPINELLSEE 142 (175)
Q Consensus 81 qV~~--~g~W~~V~p~~~~~vVniGd~le~----------------~~~~R~Si~~F~~p~~d~~~~~~i~pl~~~~~~~ 142 (175)
||+. +|+|++|+|+||++|||+||+|++ ..++|||++||++|+. |++|+|++++++++
T Consensus 233 QV~~~~~g~Wi~V~p~pg~~vVNiGD~L~~~Tng~~~St~HRVv~~~~~~R~Si~~F~~P~~----d~~i~pl~~~v~~~ 308 (345)
T PLN02750 233 QISRRSDGEWIPVKPIPDAFIINIGNCMQVWTNDLYWSAEHRVVVNSQKERFSIPFFFFPSH----YVNIKPLDELINEQ 308 (345)
T ss_pred EEeecCCCeEEEccCCCCeEEEEhHHHHHHHhCCeeecccceeccCCCCCEEEEEEeecCCC----CCeecCcHHhcCCC
Confidence 9974 699999999999999999999998 3578999999999999 89999999999999
Q ss_pred CCCCCCCccHHHHHHHHHhcCC
Q 047232 143 NPPIYKEITVKEYLSHSYSIGL 164 (175)
Q Consensus 143 ~~~~y~~~~~~dy~~~~~~~~~ 164 (175)
+|++|+|++++||+..++...+
T Consensus 309 ~p~~y~p~~~~e~~~~~~~~~~ 330 (345)
T PLN02750 309 NPPKYKEFNWGKFFASRNRSDY 330 (345)
T ss_pred CCCccCCccHHHHHHHHHhccc
Confidence 9999999999999999888755
No 15
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=2.1e-45 Score=304.74 Aligned_cols=162 Identities=25% Similarity=0.389 Sum_probs=146.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc--cccCCceeeEeeeCCCCCCCC-CCccccCCCCCCceEEEecCCC
Q 047232 1 DIIVDHAKKTTELALTLFELISEALGLNANRLKD--MDCAEGLFLLGHYYPACPEPE-LTMGTDSHADTSFLTVLLQDRL 77 (175)
Q Consensus 1 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~--~~~~~~~~l~~~~Yp~~~~~~-~~~g~~~HtD~g~lTiL~qd~~ 77 (175)
+++++|+++|.+++..|++++|++||+++++|.+ ......+.+|++|||||+.++ ..+|+++|||+|+||||+||++
T Consensus 140 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~lrl~~YP~~~~~~~~~~g~~~HTD~g~lTlL~qd~v 219 (332)
T PLN03002 140 ETMEKYHQEALRVSMAIAKLLALALDLDVGYFDRTEMLGKPIATMRLLRYQGISDPSKGIYACGAHSDFGMMTLLATDGV 219 (332)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhccccccCCCchheeeeeCCCCCCcccCccccccccCCCeEEEEeeCCC
Confidence 3689999999999999999999999999999986 444455789999999998665 4789999999999999999999
Q ss_pred CCeeEeeC-----CeEEEEeecCCeEEEEecccccc---------------CCCCeEEEEEeeccCCCCCCceEeecCcc
Q 047232 78 GGLQVLHE-----NEWVNVTPIHGALVVNLGDMMQA---------------NVGPRVSVACFFRSHFQSEKARLYGPINE 137 (175)
Q Consensus 78 ~GLqV~~~-----g~W~~V~p~~~~~vVniGd~le~---------------~~~~R~Si~~F~~p~~d~~~~~~i~pl~~ 137 (175)
+||||+++ |+|++|+|+||++|||+||+|++ ...+|||++||++|+. |++|+|+++
T Consensus 220 ~GLQV~~~~~~~~g~Wi~Vpp~pg~~VVNiGD~L~~wTng~~kSt~HRVv~~~~~R~Sia~F~~p~~----d~~i~pl~~ 295 (332)
T PLN03002 220 MGLQICKDKNAMPQKWEYVPPIKGAFIVNLGDMLERWSNGFFKSTLHRVLGNGQERYSIPFFVEPNH----DCLVECLPT 295 (332)
T ss_pred CceEEecCCCCCCCcEEECCCCCCeEEEEHHHHHHHHhCCeeECcCCeecCCCCCeeEEEEEecCCC----CeeEecCCc
Confidence 99999864 68999999999999999999998 4568999999999999 899999999
Q ss_pred ccCCCCCCCCCCccHHHHHHHHHhcCCCC
Q 047232 138 LLSEENPPIYKEITVKEYLSHSYSIGLDG 166 (175)
Q Consensus 138 ~~~~~~~~~y~~~~~~dy~~~~~~~~~~~ 166 (175)
++++++|++|++++++||+..+++..+..
T Consensus 296 ~~~~~~p~~y~~~~~~e~l~~~~~~~~~~ 324 (332)
T PLN03002 296 CKSESDLPKYPPIKCSTYLTQRYEETHAK 324 (332)
T ss_pred ccCCCCcccCCCccHHHHHHHHHHHHhhh
Confidence 99999999999999999999999876643
No 16
>PLN02365 2-oxoglutarate-dependent dioxygenase
Probab=100.00 E-value=3.5e-45 Score=299.77 Aligned_cols=165 Identities=31% Similarity=0.469 Sum_probs=149.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcCC-CcccccccccCCceeeEeeeCCCCCCCCCCccccCCCCCCceEEEecCC-CC
Q 047232 1 DIIVDHAKKTTELALTLFELISEALGL-NANRLKDMDCAEGLFLLGHYYPACPEPELTMGTDSHADTSFLTVLLQDR-LG 78 (175)
Q Consensus 1 ~~~~~y~~~~~~l~~~ll~~la~~Lgl-~~~~~~~~~~~~~~~l~~~~Yp~~~~~~~~~g~~~HtD~g~lTiL~qd~-~~ 78 (175)
+++++|+++|.+++.+|++++|++||+ ++++|++. ...+|++||||++.++..+|+++|||+|+||||+||+ ++
T Consensus 112 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~f~~~----~~~lr~~~YP~~p~~~~~~g~~~HtD~g~lTlL~qd~~~~ 187 (300)
T PLN02365 112 ETIKKYAKAIHDLAMDLARKLAESLGLVEGDFFQGW----PSQFRINKYNFTPETVGSSGVQIHTDSGFLTILQDDENVG 187 (300)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHhhc----ccceeeeecCCCCCccccccccCccCCCceEEEecCCCcC
Confidence 368999999999999999999999999 88888764 3579999999998888889999999999999999984 99
Q ss_pred CeeEee--CCeEEEEeecCCeEEEEecccccc----------------CCCCeEEEEEeeccCCCCCCceEeecCccccC
Q 047232 79 GLQVLH--ENEWVNVTPIHGALVVNLGDMMQA----------------NVGPRVSVACFFRSHFQSEKARLYGPINELLS 140 (175)
Q Consensus 79 GLqV~~--~g~W~~V~p~~~~~vVniGd~le~----------------~~~~R~Si~~F~~p~~d~~~~~~i~pl~~~~~ 140 (175)
||||++ +|+|++|+|+||++|||+||+||+ ...+|||++||+.|+. |++|.|++++++
T Consensus 188 GLqV~~~~~g~Wi~V~p~pga~vVNiGD~l~~~TNG~~~St~HRVv~~~~~~R~Si~~F~~p~~----d~~i~p~~~~v~ 263 (300)
T PLN02365 188 GLEVMDPSSGEFVPVDPLPGTLLVNLGDVATAWSNGRLCNVKHRVQCKEATMRISIASFLLGPK----DDDVEAPPEFVD 263 (300)
T ss_pred ceEEEECCCCeEEecCCCCCeEEEEhhHHHHHHhCCceecccceeEcCCCCCEEEEEEEecCCC----CCeEeCCHHHcC
Confidence 999987 489999999999999999999998 3468999999999999 789999999999
Q ss_pred CCCCCCCCCccHHHHHHHHHhcCCCCCCCcccc
Q 047232 141 EENPPIYKEITVKEYLSHSYSIGLDGTSPLDHF 173 (175)
Q Consensus 141 ~~~~~~y~~~~~~dy~~~~~~~~~~~~~~l~~~ 173 (175)
+++|++|++++++||+..+......+...++.+
T Consensus 264 ~~~p~~y~~~~~~e~~~~~~~~~~~~~~~~~~~ 296 (300)
T PLN02365 264 AEHPRLYKPFTYEDYRKLRLSTKLHAGEALALI 296 (300)
T ss_pred CCCCccCCCccHHHHHHHHHhccccccchHhhh
Confidence 889999999999999999999887776666543
No 17
>PLN02704 flavonol synthase
Probab=100.00 E-value=2.7e-45 Score=304.55 Aligned_cols=157 Identities=32% Similarity=0.606 Sum_probs=145.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCC--ceeeEeeeCCCCCCCCCCccccCCCCCCceEEEecCCCC
Q 047232 1 DIIVDHAKKTTELALTLFELISEALGLNANRLKDMDCAE--GLFLLGHYYPACPEPELTMGTDSHADTSFLTVLLQDRLG 78 (175)
Q Consensus 1 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~--~~~l~~~~Yp~~~~~~~~~g~~~HtD~g~lTiL~qd~~~ 78 (175)
+++++|+++|.+++.+|+++++++||+++++|.+.+... .+.+|++|||||+.++..+|+++|||+|+||||+||+++
T Consensus 157 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~v~ 236 (335)
T PLN02704 157 EVNEEYAKYLRGVADKLFKTLSLGLGLEEDELKEAVGGEELEYLLKINYYPPCPRPDLALGVVAHTDMSAITILVPNEVQ 236 (335)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCCchhhhhhhhcCCCCCCcccccCccCccCCcceEEEecCCCC
Confidence 368999999999999999999999999999998765432 347899999999988888999999999999999999999
Q ss_pred CeeEeeCCeEEEEeecCCeEEEEecccccc----------------CCCCeEEEEEeeccCCCCCCceEeecCccccCCC
Q 047232 79 GLQVLHENEWVNVTPIHGALVVNLGDMMQA----------------NVGPRVSVACFFRSHFQSEKARLYGPINELLSEE 142 (175)
Q Consensus 79 GLqV~~~g~W~~V~p~~~~~vVniGd~le~----------------~~~~R~Si~~F~~p~~d~~~~~~i~pl~~~~~~~ 142 (175)
||||+++|+|++|+|.||++|||+||+||+ ...+|||++||++|+. |++|+|+|++++++
T Consensus 237 GLQV~~~g~Wi~V~p~pg~lvVNvGD~L~~~TNg~~kSt~HRVv~~~~~~R~Si~~F~~p~~----d~~i~pl~~~~~~~ 312 (335)
T PLN02704 237 GLQVFRDDHWFDVKYIPNALVIHIGDQIEILSNGKYKSVLHRTTVNKEKTRMSWPVFLEPPS----ELAVGPLPKLINED 312 (335)
T ss_pred ceeEeECCEEEeCCCCCCeEEEEechHHHHHhCCeeecccceeecCCCCCeEEEEEEecCCC----CceEeCChHhcCCC
Confidence 999999999999999999999999999998 3578999999999999 89999999999999
Q ss_pred CCCCCCCccHHHHHHHHHh
Q 047232 143 NPPIYKEITVKEYLSHSYS 161 (175)
Q Consensus 143 ~~~~y~~~~~~dy~~~~~~ 161 (175)
+|++|++++++||+..+++
T Consensus 313 ~p~~Y~~~~~~e~~~~~~~ 331 (335)
T PLN02704 313 NPPKFKTKKFKDYVYCKLN 331 (335)
T ss_pred CCccCCCCCHHHHHHHHHh
Confidence 9999999999999998876
No 18
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase
Probab=100.00 E-value=9.9e-45 Score=303.11 Aligned_cols=160 Identities=34% Similarity=0.565 Sum_probs=145.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCCceeeEeeeCCCCCCCCCCccccCCCCCCceEEEecCCCCCe
Q 047232 1 DIIVDHAKKTTELALTLFELISEALGLNANRLKDMDCAEGLFLLGHYYPACPEPELTMGTDSHADTSFLTVLLQDRLGGL 80 (175)
Q Consensus 1 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~l~~~~Yp~~~~~~~~~g~~~HtD~g~lTiL~qd~~~GL 80 (175)
+++++|+++|.+|+..|+++++++||+++++|.+.+....+.+|++|||+|+.++..+|+++|||+|+||||+||+++||
T Consensus 155 ~~~~~y~~~~~~L~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~G~~~HTD~g~lTlL~Qd~v~GL 234 (358)
T PLN02515 155 AVTEEYSEKLMGLACKLLEVLSEAMGLEKEALTKACVDMDQKVVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGL 234 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHhhcCccceEEEeecCCCCChhhccCCCCCCCCCeEEEEecCCCCce
Confidence 36899999999999999999999999999999887666667889999999988888899999999999999999999999
Q ss_pred eEeeCC--eEEEEeecCCeEEEEecccccc----------------CCCCeEEEEEeeccCCCCCCceEeecCccccCCC
Q 047232 81 QVLHEN--EWVNVTPIHGALVVNLGDMMQA----------------NVGPRVSVACFFRSHFQSEKARLYGPINELLSEE 142 (175)
Q Consensus 81 qV~~~g--~W~~V~p~~~~~vVniGd~le~----------------~~~~R~Si~~F~~p~~d~~~~~~i~pl~~~~~~~ 142 (175)
||+++| +|++|+|+||++|||+||+||+ ...+|||++||++|+. |++|+|++ +++++
T Consensus 235 QV~~~~~~~Wi~Vpp~pgalVVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Si~~F~~P~~----d~~i~Pl~-~~~~~ 309 (358)
T PLN02515 235 QATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNCSRLSIATFQNPAP----DATVYPLK-VREGE 309 (358)
T ss_pred EEEECCCCeEEECCCCCCeEEEEccHHHHHHhCCeeeeecceEECCCCCCEEEEEEEecCCC----CCEEECCC-cCCCC
Confidence 998763 7999999999999999999998 3578999999999999 89999997 66667
Q ss_pred CCCCCCCccHHHHHHHHHhcCCC
Q 047232 143 NPPIYKEITVKEYLSHSYSIGLD 165 (175)
Q Consensus 143 ~~~~y~~~~~~dy~~~~~~~~~~ 165 (175)
+|++|++++++||+..++...+.
T Consensus 310 ~p~~y~~~t~~eyl~~~~~~~~~ 332 (358)
T PLN02515 310 KPILEEPITFAEMYRRKMSRDLE 332 (358)
T ss_pred CCCcCCCcCHHHHHHHHHhcccc
Confidence 89999999999999999877553
No 19
>PLN02156 gibberellin 2-beta-dioxygenase
Probab=100.00 E-value=1.1e-44 Score=300.27 Aligned_cols=161 Identities=22% Similarity=0.449 Sum_probs=145.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcCCCc-cccccccc--CCceeeEeeeCCCCCCC--CCCccccCCCCCCceEEEecC
Q 047232 1 DIIVDHAKKTTELALTLFELISEALGLNA-NRLKDMDC--AEGLFLLGHYYPACPEP--ELTMGTDSHADTSFLTVLLQD 75 (175)
Q Consensus 1 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~-~~~~~~~~--~~~~~l~~~~Yp~~~~~--~~~~g~~~HtD~g~lTiL~qd 75 (175)
+++++|+++|.+++.+|++++|++||+++ ++|++++. .....+|++|||||+.. +..+|+++|||+|+||||+||
T Consensus 135 ~~~~~Y~~~~~~L~~~ll~~la~~LGl~~~~~f~~~~~~~~~~~~lRl~~YP~~~~~~~~~~~g~~~HTD~g~lTlL~Qd 214 (335)
T PLN02156 135 EAVEEYMKEMKRMSSKVLEMVEEELKIEPKEKLSKLVKVKESDSCLRMNHYPEKEETPEKVEIGFGEHTDPQLISLLRSN 214 (335)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCcCcHHHHHHHhcCCCccceEeEEeCCCCCCCccccccCCCCccCCCceEEEEeC
Confidence 36899999999999999999999999974 78887653 33467999999999753 247899999999999999999
Q ss_pred CCCCeeEe-eCCeEEEEeecCCeEEEEecccccc----------------CCCCeEEEEEeeccCCCCCCceEeecCccc
Q 047232 76 RLGGLQVL-HENEWVNVTPIHGALVVNLGDMMQA----------------NVGPRVSVACFFRSHFQSEKARLYGPINEL 138 (175)
Q Consensus 76 ~~~GLqV~-~~g~W~~V~p~~~~~vVniGd~le~----------------~~~~R~Si~~F~~p~~d~~~~~~i~pl~~~ 138 (175)
+++||||+ ++|+|++|+|+||++|||+||+||+ ..++|||++||+.|+. |++|.|++++
T Consensus 215 ~v~GLQV~~~~g~Wi~Vpp~pga~VVNiGD~l~~wTNg~~kSt~HRVv~~~~~~R~SiafF~~P~~----d~~i~pl~~~ 290 (335)
T PLN02156 215 DTAGLQICVKDGTWVDVPPDHSSFFVLVGDTLQVMTNGRFKSVKHRVVTNTKRSRISMIYFAGPPL----SEKIAPLSCL 290 (335)
T ss_pred CCCceEEEeCCCCEEEccCCCCcEEEEhHHHHHHHhCCeeeccceeeecCCCCCEEEEEEeecCCC----CCEEeCChHh
Confidence 99999998 5799999999999999999999998 3567999999999999 8999999999
Q ss_pred cCCCCCCCCCCccHHHHHHHHHhcCCC
Q 047232 139 LSEENPPIYKEITVKEYLSHSYSIGLD 165 (175)
Q Consensus 139 ~~~~~~~~y~~~~~~dy~~~~~~~~~~ 165 (175)
+++++|++|++++++||+..+.+..+.
T Consensus 291 v~~~~p~~y~p~~~~ey~~~~~~~~~~ 317 (335)
T PLN02156 291 VPKQDDCLYNEFTWSQYKLSAYKTKLG 317 (335)
T ss_pred cCCCCCccCCCccHHHHHHHHHhccCC
Confidence 999999999999999999999987653
No 20
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.1e-44 Score=302.05 Aligned_cols=168 Identities=26% Similarity=0.489 Sum_probs=146.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCC-ceeeEeeeCCCCCCCCCCccccCCCCCCceEEEecC-CCC
Q 047232 1 DIIVDHAKKTTELALTLFELISEALGLNANRLKDMDCAE-GLFLLGHYYPACPEPELTMGTDSHADTSFLTVLLQD-RLG 78 (175)
Q Consensus 1 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~-~~~l~~~~Yp~~~~~~~~~g~~~HtD~g~lTiL~qd-~~~ 78 (175)
+++++|+.+|.+++.+|++++|++||+++++|.+.+... .+.+|++|||||+.++..+|+++|||+|+||||+|| +++
T Consensus 162 ~~~~~y~~~~~~l~~~ll~~la~~LGl~~~~f~~~~~~~~~~~lRl~~YPp~~~~~~~~g~~~HTD~g~lTlL~qd~~v~ 241 (348)
T PLN00417 162 ETLHEYTMKQRLVIEKFFKAMARSLELEENCFLEMYGENATMDTRFNMYPPCPRPDKVIGVKPHADGSAFTLLLPDKDVE 241 (348)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhccCccceeeeeecCCCCCcccccCCcCccCCCceEEEEecCCCC
Confidence 368899999999999999999999999999998866543 356899999999988878999999999999999997 699
Q ss_pred CeeEeeCCeEEEEeecCCeEEEEecccccc----------------CCCCeEEEEEeeccCCCCCCceEeecCccccCCC
Q 047232 79 GLQVLHENEWVNVTPIHGALVVNLGDMMQA----------------NVGPRVSVACFFRSHFQSEKARLYGPINELLSEE 142 (175)
Q Consensus 79 GLqV~~~g~W~~V~p~~~~~vVniGd~le~----------------~~~~R~Si~~F~~p~~d~~~~~~i~pl~~~~~~~ 142 (175)
||||+++|+|++|+|+||++|||+||+||+ ...+|||++||++|+. |++|+|++++++++
T Consensus 242 GLQV~~~g~Wi~V~p~pg~lVVNiGD~Le~~Tng~~kSt~HRVv~~~~~~R~Si~fF~~P~~----d~~i~pl~~~v~~~ 317 (348)
T PLN00417 242 GLQFLKDGKWYKAPIVPDTILINVGDQMEIMSNGIYKSPVHRVVTNREKERISVATFCIPGA----DKEIQPVDGLVSEA 317 (348)
T ss_pred ceeEeECCeEEECCCCCCcEEEEcChHHHHHhCCeecccceEEecCCCCCEEEEEEEecCCC----CceecCchHhcCCC
Confidence 999999999999999999999999999998 3468999999999998 89999999999999
Q ss_pred CCCCCCCccHHHHHHHHHhcCCCCCCCccccC
Q 047232 143 NPPIYKEITVKEYLSHSYSIGLDGTSPLDHFK 174 (175)
Q Consensus 143 ~~~~y~~~~~~dy~~~~~~~~~~~~~~l~~~~ 174 (175)
+|++|++++ +|+...++....++..|+...
T Consensus 318 ~p~~Y~~~~--~~~~~~~~~~~~~~~~~~~~~ 347 (348)
T PLN00417 318 RPRLYKTVK--KYVELFFKYYQQGRRPIEAAL 347 (348)
T ss_pred CCCCCCCHH--HHHHHHHHHHhcCcchhhhhc
Confidence 999999999 444444444434555565543
No 21
>PTZ00273 oxidase reductase; Provisional
Probab=100.00 E-value=1.2e-44 Score=299.00 Aligned_cols=160 Identities=29% Similarity=0.478 Sum_probs=147.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCCceeeEeeeCCCCCCC-CCCccccCCCCCCceEEEecCCCCC
Q 047232 1 DIIVDHAKKTTELALTLFELISEALGLNANRLKDMDCAEGLFLLGHYYPACPEP-ELTMGTDSHADTSFLTVLLQDRLGG 79 (175)
Q Consensus 1 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~l~~~~Yp~~~~~-~~~~g~~~HtD~g~lTiL~qd~~~G 79 (175)
+++++|+++|.+++..|++++|++||+++++|.+.+....+.+|++||||++.+ +..+|+++|||+|+||+|+||.++|
T Consensus 137 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~~g~~~HTD~g~lTlL~qd~~~G 216 (320)
T PTZ00273 137 ELMETHYRDMQALALVLLRALALAIGLREDFFDSKFMEPLSVFRMKHYPALPQTKKGRTVCGEHTDYGIITLLYQDSVGG 216 (320)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHhhCCCcceeeeeecCCCCCccccCcccccccCCCeEEEEecCCCCc
Confidence 368999999999999999999999999999999877767778999999999864 4678999999999999999999999
Q ss_pred eeEee-CCeEEEEeecCCeEEEEecccccc---------------CCCCeEEEEEeeccCCCCCCceEeecCccccCCCC
Q 047232 80 LQVLH-ENEWVNVTPIHGALVVNLGDMMQA---------------NVGPRVSVACFFRSHFQSEKARLYGPINELLSEEN 143 (175)
Q Consensus 80 LqV~~-~g~W~~V~p~~~~~vVniGd~le~---------------~~~~R~Si~~F~~p~~d~~~~~~i~pl~~~~~~~~ 143 (175)
|||+. +|+|++|+|.||++|||+||+||+ ...+|||++||++|+. |++|+|+|+++++++
T Consensus 217 LqV~~~~g~Wi~V~p~pg~lvVNvGD~l~~~TnG~~kSt~HRVv~~~~~R~Si~~F~~p~~----d~~i~pl~~~~~~~~ 292 (320)
T PTZ00273 217 LQVRNLSGEWMDVPPLEGSFVVNIGDMMEMWSNGRYRSTPHRVVNTGVERYSMPFFCEPNP----NVIIKCLDNCHSEEN 292 (320)
T ss_pred eEEECCCCCEEeCCCCCCeEEEEHHHHHHHHHCCeeeCCCccccCCCCCeEEEEEEEcCCC----CceEecCccccCCCC
Confidence 99996 699999999999999999999998 4568999999999999 899999999999999
Q ss_pred CCCCCCccHHHHHHHHHhcCC
Q 047232 144 PPIYKEITVKEYLSHSYSIGL 164 (175)
Q Consensus 144 ~~~y~~~~~~dy~~~~~~~~~ 164 (175)
|++|++++++||+..++...+
T Consensus 293 ~~~y~~~~~~e~~~~~~~~~~ 313 (320)
T PTZ00273 293 PPKYPPVRAVDWLLKRFAETY 313 (320)
T ss_pred cccCCceeHHHHHHHHHHHHH
Confidence 999999999999999987754
No 22
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=100.00 E-value=4.6e-44 Score=295.15 Aligned_cols=167 Identities=45% Similarity=0.785 Sum_probs=151.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccC-CceeeEeeeCCCCCCCCCCccccCCCCCCceEEEecC-CCC
Q 047232 1 DIIVDHAKKTTELALTLFELISEALGLNANRLKDMDCA-EGLFLLGHYYPACPEPELTMGTDSHADTSFLTVLLQD-RLG 78 (175)
Q Consensus 1 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~-~~~~l~~~~Yp~~~~~~~~~g~~~HtD~g~lTiL~qd-~~~ 78 (175)
++|++|.+++.+++..|+++++++||++.+++.+.+.. ..+.+|+|||||||+++.++|+++|||.++||+|+|| +++
T Consensus 135 e~~~eY~~~~~~L~~~l~~~l~eslgl~~~~~~~~~~~~~~~~~r~n~Yp~cp~pe~~lGl~~HtD~~~lTiLlqd~~V~ 214 (322)
T KOG0143|consen 135 ETMEEYAKEVMELSEKLLRLLSESLGLEPEYLEKLFGETGGQVMRLNYYPPCPEPELTLGLGAHTDKSFLTILLQDDDVG 214 (322)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHhhCCccceEEEEeecCCCcCccccccccCccCcCceEEEEccCCcC
Confidence 47899999999999999999999999997666665544 4668999999999999999999999999999999998 899
Q ss_pred CeeEe-eCCeEEEEeecCCeEEEEecccccc----------------CCCCeEEEEEeeccCCCCCCceEeecCccccCC
Q 047232 79 GLQVL-HENEWVNVTPIHGALVVNLGDMMQA----------------NVGPRVSVACFFRSHFQSEKARLYGPINELLSE 141 (175)
Q Consensus 79 GLqV~-~~g~W~~V~p~~~~~vVniGd~le~----------------~~~~R~Si~~F~~p~~d~~~~~~i~pl~~~~~~ 141 (175)
||||. ++|.|++|+|+|+++|||+||+||+ ..++|+|+|||+.|+. +.+|.|+++++++
T Consensus 215 GLQv~~~dg~Wi~V~P~p~a~vVNiGD~l~~lSNG~ykSv~HRV~~n~~~~R~Sia~F~~p~~----d~~i~p~~elv~~ 290 (322)
T KOG0143|consen 215 GLQVFTKDGKWIDVPPIPGAFVVNIGDMLQILSNGRYKSVLHRVVVNGEKERISVAFFVFPPL----DKVIGPPEELVDE 290 (322)
T ss_pred ceEEEecCCeEEECCCCCCCEEEEcccHHhHhhCCcccceEEEEEeCCCCceEEEEEEecCCC----CceecChhhhCCC
Confidence 99999 5899999999999999999999998 3456999999999999 7999999999987
Q ss_pred CCCCCCCCccHHHHHHHHHhcCCCCCCCccc
Q 047232 142 ENPPIYKEITVKEYLSHSYSIGLDGTSPLDH 172 (175)
Q Consensus 142 ~~~~~y~~~~~~dy~~~~~~~~~~~~~~l~~ 172 (175)
. |++|+++++.+|++.+.+....++..++.
T Consensus 291 ~-~~~Y~~~~~~~y~~~~~~~~~~~~~~~~~ 320 (322)
T KOG0143|consen 291 E-PPKYKPFTFGDYLEFYFSKKLQGKTLLDY 320 (322)
T ss_pred C-CCccCcEEHHHHHHHHHhccccCcchhhh
Confidence 7 88899999999999999998877666554
No 23
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.5e-43 Score=294.25 Aligned_cols=161 Identities=30% Similarity=0.452 Sum_probs=143.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcCCC--cccccccccCCceeeEeeeCCCCCCCCCCccccCCCCCCceEEEecCCCC
Q 047232 1 DIIVDHAKKTTELALTLFELISEALGLN--ANRLKDMDCAEGLFLLGHYYPACPEPELTMGTDSHADTSFLTVLLQDRLG 78 (175)
Q Consensus 1 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~--~~~~~~~~~~~~~~l~~~~Yp~~~~~~~~~g~~~HtD~g~lTiL~qd~~~ 78 (175)
+++++|+++|.+++..|++++|++||++ +++|.+.+....+.+|++|||||+.++..+|+++|||+|+||||+||+++
T Consensus 158 ~~~~~y~~~~~~La~~ll~~lA~~Lgl~~~~~~f~~~~~~~~~~lRl~~YPp~~~~~~~~g~~aHTD~g~lTlL~Qd~v~ 237 (341)
T PLN02984 158 VLMEEYGKHLTRIAVTLFEAIAKTLSLELSGDQKMSYLSESTGVIRVYRYPQCSNEAEAPGMEVHTDSSVISILNQDEVG 237 (341)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCcchhHHHHHhcCccceEEEEeCCCCCCcccccCccCccCCCceEEEEeCCCC
Confidence 3689999999999999999999999999 99998877777778999999999887778999999999999999999999
Q ss_pred CeeEeeCCeEEEEeecCCeEEEEecccccc-----------------CCCCeEEEEEeeccCCCCCCceEeecCccccCC
Q 047232 79 GLQVLHENEWVNVTPIHGALVVNLGDMMQA-----------------NVGPRVSVACFFRSHFQSEKARLYGPINELLSE 141 (175)
Q Consensus 79 GLqV~~~g~W~~V~p~~~~~vVniGd~le~-----------------~~~~R~Si~~F~~p~~d~~~~~~i~pl~~~~~~ 141 (175)
||||+++|+|++|+|+||++|||+||+||+ ..++|||++||++|+. |++|.|
T Consensus 238 GLQV~~~g~Wv~V~p~pgalVVNiGD~Le~wTNg~~kSt~HRVv~~~~~~~R~Sia~F~~P~~----d~~i~p------- 306 (341)
T PLN02984 238 GLEVMKDGEWFNVKPIANTLVVNLGDMMQVISDDEYKSVLHRVGKRNKKKERYSICYFVFPEE----DCVIKS------- 306 (341)
T ss_pred CeeEeeCCceEECCCCCCeEEEECChhhhhhcCCeeeCCCCccccCCCCCCeEEEEEEecCCC----CCEEcc-------
Confidence 999999999999999999999999999998 2467999999999999 788863
Q ss_pred CCCCCCCCccHHHHHHHHHhcCCCC--CCCccccCC
Q 047232 142 ENPPIYKEITVKEYLSHSYSIGLDG--TSPLDHFKL 175 (175)
Q Consensus 142 ~~~~~y~~~~~~dy~~~~~~~~~~~--~~~l~~~~~ 175 (175)
++|+|++++||+..+....... +..++.++|
T Consensus 307 ---~~y~p~t~~e~l~~~~~~~~~~~~~~~~~~~~~ 339 (341)
T PLN02984 307 ---SKYKPFTYSDFEAQVQLDVKTLGSKVGLSRFKS 339 (341)
T ss_pred ---CCcCcccHHHHHHHHHhhhhccCCcccccceec
Confidence 6899999999999988665443 333777764
No 24
>PLN02485 oxidoreductase
Probab=100.00 E-value=2.4e-43 Score=292.29 Aligned_cols=160 Identities=26% Similarity=0.414 Sum_probs=143.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcCCCccccccc-ccCCceeeEeeeCCCCCC----CCCCccccCCCCCCceEEEecC
Q 047232 1 DIIVDHAKKTTELALTLFELISEALGLNANRLKDM-DCAEGLFLLGHYYPACPE----PELTMGTDSHADTSFLTVLLQD 75 (175)
Q Consensus 1 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~-~~~~~~~l~~~~Yp~~~~----~~~~~g~~~HtD~g~lTiL~qd 75 (175)
+++++|+++|.+++.+|++++|++||+++++|.+. .....+.+|++||||++. ++..+|+++|||+|+||||+||
T Consensus 143 ~~~~~y~~~~~~l~~~ll~~~a~~Lgl~~~~f~~~~~~~~~~~lrl~~YP~~~~~~~~~~~~~g~~~HTD~g~lTlL~qd 222 (329)
T PLN02485 143 ALMEEYIKLCTDLSRKILRGIALALGGSPDEFEGKMAGDPFWVMRIIGYPGVSNLNGPPENDIGCGAHTDYGLLTLVNQD 222 (329)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhhhhccCccceEEEEeCCCCccccCCcccCcccccccCCCeEEEEecc
Confidence 36899999999999999999999999999988764 344556799999999975 4457899999999999999997
Q ss_pred -CCCCeeEee-CCeEEEEeecCCeEEEEecccccc----------------CCCCeEEEEEeeccCCCCCCceEeecCcc
Q 047232 76 -RLGGLQVLH-ENEWVNVTPIHGALVVNLGDMMQA----------------NVGPRVSVACFFRSHFQSEKARLYGPINE 137 (175)
Q Consensus 76 -~~~GLqV~~-~g~W~~V~p~~~~~vVniGd~le~----------------~~~~R~Si~~F~~p~~d~~~~~~i~pl~~ 137 (175)
+++||||+. +|+|++|+|.||++|||+||+|++ ...+|||++||++|+. |++|+|+|+
T Consensus 223 ~~~~GLqV~~~~g~Wi~V~p~pg~~vVNiGD~L~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~----d~~i~pl~~ 298 (329)
T PLN02485 223 DDITALQVRNLSGEWIWAIPIPGTFVCNIGDMLKIWSNGVYQSTLHRVINNSPKYRVCVAFFYETNF----DAAVEPLDI 298 (329)
T ss_pred CCCCeeeEEcCCCcEEECCCCCCcEEEEhHHHHHHHHCCEeeCCCceecCCCCCCeEEEEEEecCCC----Cceeecchh
Confidence 589999995 699999999999999999999998 3568999999999999 899999999
Q ss_pred ccC--CCCCCCCCCccHHHHHHHHHhcCC
Q 047232 138 LLS--EENPPIYKEITVKEYLSHSYSIGL 164 (175)
Q Consensus 138 ~~~--~~~~~~y~~~~~~dy~~~~~~~~~ 164 (175)
+++ +++|++|++++++||+..++.+.+
T Consensus 299 ~~~~~~~~~~~y~~~t~~e~~~~~~~~~~ 327 (329)
T PLN02485 299 CKEKRTGGSQVFKRVVYGEHLVNKVLTNF 327 (329)
T ss_pred hcccccCCCCCCCcEeHHHHHHHHHHHhh
Confidence 987 667899999999999999987754
No 25
>PLN02403 aminocyclopropanecarboxylate oxidase
Probab=100.00 E-value=1.7e-42 Score=283.90 Aligned_cols=164 Identities=29% Similarity=0.496 Sum_probs=142.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcCCCccccccccc---CCceeeEeeeCCCCCCCCCCccccCCCCCCceEEEecC-C
Q 047232 1 DIIVDHAKKTTELALTLFELISEALGLNANRLKDMDC---AEGLFLLGHYYPACPEPELTMGTDSHADTSFLTVLLQD-R 76 (175)
Q Consensus 1 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~---~~~~~l~~~~Yp~~~~~~~~~g~~~HtD~g~lTiL~qd-~ 76 (175)
+++++|+++|.+++..|++++|++||+++++|.+.+. .....+|++||||+++++...|+++|||+|+||+|+|+ .
T Consensus 110 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YP~~~~~~~~~G~~~HtD~g~lTlL~q~~~ 189 (303)
T PLN02403 110 KTMDEYIAQLIKLAEKLSELMSENLGLDKDYIKEAFSGNKGPSVGTKVAKYPECPRPELVRGLREHTDAGGIILLLQDDQ 189 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhccCCCccceeeeEcCCCCCCcccccCccCccCCCeEEEEEecCC
Confidence 3689999999999999999999999999999987654 23346899999999887777899999999999999997 4
Q ss_pred CCCeeEeeCCeEEEEeecC-CeEEEEecccccc----------------CCCCeEEEEEeeccCCCCCCceEeecCcccc
Q 047232 77 LGGLQVLHENEWVNVTPIH-GALVVNLGDMMQA----------------NVGPRVSVACFFRSHFQSEKARLYGPINELL 139 (175)
Q Consensus 77 ~~GLqV~~~g~W~~V~p~~-~~~vVniGd~le~----------------~~~~R~Si~~F~~p~~d~~~~~~i~pl~~~~ 139 (175)
++||||+++|+|++|+|+| |++|||+||+||+ ..++|||++||++|+. |++|+|+|+++
T Consensus 190 v~GLqV~~~g~Wi~V~p~p~~~lvVNvGD~L~~~Tng~~~S~~HRVv~~~~~~R~Si~~F~~p~~----d~~i~pl~~~~ 265 (303)
T PLN02403 190 VPGLEFLKDGKWVPIPPSKNNTIFVNTGDQLEVLSNGRYKSTLHRVMADKNGSRLSIATFYNPAG----DAIISPAPKLL 265 (303)
T ss_pred CCceEeccCCeEEECCCCCCCEEEEEehHHHHHHhCCeeecccceeecCCCCCEEEEEEEEcCCC----CCeEeCchhhC
Confidence 9999999889999999999 6999999999998 3567999999999999 89999999886
Q ss_pred CCCCCCCCC-CccHHHHHHHHHhcCC-CCCCCccccCC
Q 047232 140 SEENPPIYK-EITVKEYLSHSYSIGL-DGTSPLDHFKL 175 (175)
Q Consensus 140 ~~~~~~~y~-~~~~~dy~~~~~~~~~-~~~~~l~~~~~ 175 (175)
. + +++++||++.+.+... .+++.++.+++
T Consensus 266 ~-------~~~~~~~eyl~~~~~~~~~~~~~~~~~~~~ 296 (303)
T PLN02403 266 Y-------PSNYRFQDYLKLYSTTKFGDKGPRFESMKK 296 (303)
T ss_pred C-------CCCccHHHHHHHHHHhccccccchHHHhhh
Confidence 3 3 4899999999887443 34666776653
No 26
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only]
Probab=100.00 E-value=5.8e-39 Score=257.62 Aligned_cols=145 Identities=29% Similarity=0.444 Sum_probs=132.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCCceeeEeeeCCCCCCCCCCccccCCCCCCceEEEecCCCCCee
Q 047232 2 IIVDHAKKTTELALTLFELISEALGLNANRLKDMDCAEGLFLLGHYYPACPEPELTMGTDSHADTSFLTVLLQDRLGGLQ 81 (175)
Q Consensus 2 ~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~l~~~~Yp~~~~~~~~~g~~~HtD~g~lTiL~qd~~~GLq 81 (175)
++..|+++|.+++.+||+++|++|+|++++|+..++.+.+.+|+.+||+.+..+...|.|+|||+|+||+|+||+++|||
T Consensus 135 ~ll~~~~~~~~~~~rLL~aiA~~LdL~~d~Fd~~~~d~~~~~RLlrYP~~~~~~~~~~~GaHtD~G~lTLl~Qd~~~GLq 214 (322)
T COG3491 135 ALLQYYRAMTAVGLRLLRAIALGLDLPEDFFDKRTSDPNSVLRLLRYPSRPAREGADGVGAHTDYGLLTLLFQDDVGGLE 214 (322)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhhccCCchheEEEEecCCCcccccccccccccCCCeEEEEEecccCCeE
Confidence 57899999999999999999999999999999998888889999999999888888889999999999999999999999
Q ss_pred EeeC-CeEEEEeecCCeEEEEecccccc----------------CCCCeEEEEEeeccCCCCCCceEeecCcc-ccCCCC
Q 047232 82 VLHE-NEWVNVTPIHGALVVNLGDMMQA----------------NVGPRVSVACFFRSHFQSEKARLYGPINE-LLSEEN 143 (175)
Q Consensus 82 V~~~-g~W~~V~p~~~~~vVniGd~le~----------------~~~~R~Si~~F~~p~~d~~~~~~i~pl~~-~~~~~~ 143 (175)
|+.+ |+|++|+|.||++|||+||+||+ +..+||||+||+.|+. |+.|.|+.+ +.+...
T Consensus 215 v~~~~g~Wl~v~P~pgtlvVNiGdmLe~~Tng~lrST~HRV~~~~~~~R~SipfF~~p~~----Da~I~Pl~~l~~~~a~ 290 (322)
T COG3491 215 VRPPNGGWLDVPPIPGTLVVNIGDMLERWTNGRLRSTVHRVRNPPGVDRYSIPFFLEPNF----DAEIAPLLPLCPEAAN 290 (322)
T ss_pred EecCCCCeeECCCCCCeEEEeHHHHHHHHhCCeeccccceeecCCCccceeeeeeccCCC----CccccccCCCCccccc
Confidence 9988 99999999999999999999998 3359999999999999 799998664 455566
Q ss_pred CCCCCCc
Q 047232 144 PPIYKEI 150 (175)
Q Consensus 144 ~~~y~~~ 150 (175)
++++..-
T Consensus 291 ~~~~~~t 297 (322)
T COG3491 291 EPRGPGT 297 (322)
T ss_pred CCcCCCC
Confidence 7777664
No 27
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit. The holoenzyme has the activity (1.14.11.2 from EC) catalysing the reaction: Procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2. The full enzyme consists of a alpha2 beta2 complex with the alpha subunit contributing most of the parts of the active site []. The family also includes lysyl hydrolases, isopenicillin synthases and AlkB. ; GO: 0016491 oxidoreductase activity, 0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, 0055114 oxidation-reduction process; PDB: 3ON7_D 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=99.82 E-value=1.6e-20 Score=129.65 Aligned_cols=79 Identities=42% Similarity=0.756 Sum_probs=64.7
Q ss_pred eeeEeeeCCCCCCCCCCccccCCCCC--CceEEEecCCCCCeeEeeCCeEEEEeecCCeEEEEecccccc----------
Q 047232 41 LFLLGHYYPACPEPELTMGTDSHADT--SFLTVLLQDRLGGLQVLHENEWVNVTPIHGALVVNLGDMMQA---------- 108 (175)
Q Consensus 41 ~~l~~~~Yp~~~~~~~~~g~~~HtD~--g~lTiL~qd~~~GLqV~~~g~W~~V~p~~~~~vVniGd~le~---------- 108 (175)
..+++++||+ ++...|+++|+|. +++|+|+|++++||||..+++|+.|++.++.++||+||+|++
T Consensus 2 ~~~~~~~Y~~---~~~~~~~~~H~D~~~~~~Til~~~~~~gL~~~~~~~~~~v~~~~~~~~v~~G~~l~~~t~g~~~~~~ 78 (98)
T PF03171_consen 2 SQLRLNRYPP---PENGVGIGPHTDDEDGLLTILFQDEVGGLQVRDDGEWVDVPPPPGGFIVNFGDALEILTNGRYPATL 78 (98)
T ss_dssp -EEEEEEE-S---CCGCEEEEEEEES--SSEEEEEETSTS-EEEEETTEEEE----TTCEEEEEBHHHHHHTTTSS----
T ss_pred CEEEEEECCC---cccCCceeCCCcCCCCeEEEEecccchheeccccccccCccCccceeeeeceeeeecccCCccCCce
Confidence 3578999998 5567899999999 999999999999999999999999999999999999999986
Q ss_pred ------CCCCeEEEEEeecc
Q 047232 109 ------NVGPRVSVACFFRS 122 (175)
Q Consensus 109 ------~~~~R~Si~~F~~p 122 (175)
....|+|++||++|
T Consensus 79 HrV~~~~~~~R~s~~~f~~p 98 (98)
T PF03171_consen 79 HRVVPPTEGERYSLTFFLRP 98 (98)
T ss_dssp EEEE--STS-EEEEEEEEE-
T ss_pred eeeEcCCCCCEEEEEEEECC
Confidence 45899999999987
No 28
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A ....
Probab=95.97 E-value=0.0088 Score=40.63 Aligned_cols=72 Identities=26% Similarity=0.337 Sum_probs=47.6
Q ss_pred EeeeCCCCCCCCCCccccCCCCC-----CceEEEec--CC-----CCCeeEee----CCeEEEEe-----ecCCeEEEEe
Q 047232 44 LGHYYPACPEPELTMGTDSHADT-----SFLTVLLQ--DR-----LGGLQVLH----ENEWVNVT-----PIHGALVVNL 102 (175)
Q Consensus 44 ~~~~Yp~~~~~~~~~g~~~HtD~-----g~lTiL~q--d~-----~~GLqV~~----~g~W~~V~-----p~~~~~vVni 102 (175)
++++|++. -.+.+|+|. ..+|+|+. +. .+.|++.. ++....++ |.+|.+|+.-
T Consensus 2 ~~~~y~~G------~~~~~H~D~~~~~~~~~t~llyL~~~~~~~~GG~l~~~~~~~~~~~~~~~~~~~~~p~~g~~v~F~ 75 (100)
T PF13640_consen 2 QLNRYPPG------GFFGPHTDNSYDPHRRVTLLLYLNDPEWEFEGGELEFYPSKDSDDVSREVEDFDIVPKPGRLVIFP 75 (100)
T ss_dssp EEEEEETT------EEEEEEESSSCCCSEEEEEEEESS-CS-HCEE--EEETTTS-TSSTCEEEGGGSEE-BTTEEEEEE
T ss_pred EEEEECcC------CEEeeeECCCCCCcceEEEEEEECCCCcccCCCEEEEeccccCCCcceEEEeccccCCCCEEEEEe
Confidence 45666542 247799988 58888844 22 35688874 35566666 9999999999
Q ss_pred c-ccccc-----CCCCeEEEEEeec
Q 047232 103 G-DMMQA-----NVGPRVSVACFFR 121 (175)
Q Consensus 103 G-d~le~-----~~~~R~Si~~F~~ 121 (175)
+ +.+.. ....|+++.+|++
T Consensus 76 ~~~~~H~v~~v~~~~~R~~l~~~~~ 100 (100)
T PF13640_consen 76 SDNSLHGVTPVGEGGRRYSLTFWFH 100 (100)
T ss_dssp SCTCEEEEEEE-EESEEEEEEEEEE
T ss_pred CCCCeecCcccCCCCCEEEEEEEEC
Confidence 9 44443 3578999998863
No 29
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues. Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor.
Probab=95.10 E-value=0.49 Score=35.48 Aligned_cols=100 Identities=20% Similarity=0.168 Sum_probs=63.7
Q ss_pred HHHHHHHHHHHHHHcCCCcccccccccCCceeeEeeeCCCCCCCCCCccccCCCCCC--------ceEEEec--C--CCC
Q 047232 11 TELALTLFELISEALGLNANRLKDMDCAEGLFLLGHYYPACPEPELTMGTDSHADTS--------FLTVLLQ--D--RLG 78 (175)
Q Consensus 11 ~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~l~~~~Yp~~~~~~~~~g~~~HtD~g--------~lTiL~q--d--~~~ 78 (175)
..+...|.+.++..++++... ......+.+..|.+. -...+|.|.. .+|+++. + ..+
T Consensus 58 ~~~~~~l~~~i~~~~~~~~~~-----~~~~~~~~~~~Y~~g------~~~~~H~D~~~~~~~~~r~~T~~~yLn~~~~GG 126 (178)
T smart00702 58 DLVIERIRQRLADFLGLLRGL-----PLSAEDAQVARYGPG------GHYGPHVDNFEDDENGDRIATFLLYLNDVEEGG 126 (178)
T ss_pred CHHHHHHHHHHHHHHCCCchh-----hccCcceEEEEECCC------CcccCcCCCCCCCCCCCeEEEEEEEeccCCcCc
Confidence 356777888888888875321 111223556778762 2367899966 6888765 3 234
Q ss_pred CeeEeeCC--eEEEEeecCCeEEEEe-cc--cccc----CCCCeEEEEEeec
Q 047232 79 GLQVLHEN--EWVNVTPIHGALVVNL-GD--MMQA----NVGPRVSVACFFR 121 (175)
Q Consensus 79 GLqV~~~g--~W~~V~p~~~~~vVni-Gd--~le~----~~~~R~Si~~F~~ 121 (175)
.|.+...+ ....|.|..|.+++.- ++ .+.. ....|+++..+++
T Consensus 127 ~~~f~~~~~~~~~~v~P~~G~~v~f~~~~~~~~H~v~pv~~G~r~~~~~W~~ 178 (178)
T smart00702 127 ELVFPGLGLMVCATVKPKKGDLLFFPSGRGRSLHGVCPVTRGSRWAITGWIR 178 (178)
T ss_pred eEEecCCCCccceEEeCCCCcEEEEeCCCCCccccCCcceeCCEEEEEEEEC
Confidence 46666544 3678999999988866 43 3433 3468999988763
No 30
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro []. Interestingly TET2 is considered as an oncogene, as it is found mutated in some types of cancer []. This entry represents the double-stranded beta helix (DSBH) fold of the 2-oxoglutarate (2OG) - Fe(II) oxygenases. DSBH comprises a part of the catalytic domain in TETS. It is found in many organisms including fruit fly, African malaria mosquito, zebrafish, mouse and human.
Probab=94.97 E-value=0.1 Score=39.59 Aligned_cols=64 Identities=25% Similarity=0.160 Sum_probs=47.6
Q ss_pred ccccCCCCC----CceEEEecC----CCCCeeEeeC----CeEEEEeecCCeEEEEecccccc----------CCCCeEE
Q 047232 58 MGTDSHADT----SFLTVLLQD----RLGGLQVLHE----NEWVNVTPIHGALVVNLGDMMQA----------NVGPRVS 115 (175)
Q Consensus 58 ~g~~~HtD~----g~lTiL~qd----~~~GLqV~~~----g~W~~V~p~~~~~vVniGd~le~----------~~~~R~S 115 (175)
.....|.|. ..+|++..- ..+|+-+... .-=+.|.+.+|++++..|-.+.. ....|+|
T Consensus 85 r~t~~HrD~~~~~~~~~~~~t~~~gd~~~g~l~lp~~~~~~~g~~~~~~~GtVl~~~~~~~~Hgvtpv~~~~~~~~~R~s 164 (171)
T PF12851_consen 85 RCTHSHRDTHNMPNGYDVLCTLGRGDYDGGRLELPGLDPNILGVAFAYQPGTVLIFCAKRELHGVTPVESPNRNHGTRIS 164 (171)
T ss_pred cCccceecCCCCCCCeEEEEecCCccccCceEeccccccccCCEEEecCCCcEEEEcccceeeecCcccCCCCCCCeEEE
Confidence 456889999 778888762 2355555432 25677889999999999998877 2378999
Q ss_pred EEEeec
Q 047232 116 VACFFR 121 (175)
Q Consensus 116 i~~F~~ 121 (175)
++||.+
T Consensus 165 lvfy~h 170 (171)
T PF12851_consen 165 LVFYQH 170 (171)
T ss_pred EEEEeE
Confidence 999975
No 31
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional
Probab=93.67 E-value=1.1 Score=35.49 Aligned_cols=45 Identities=20% Similarity=0.171 Sum_probs=34.3
Q ss_pred CCCeeEeeCCeEEEEeecCCeEEEEecccccc----CCCCeEEEEEeec
Q 047232 77 LGGLQVLHENEWVNVTPIHGALVVNLGDMMQA----NVGPRVSVACFFR 121 (175)
Q Consensus 77 ~~GLqV~~~g~W~~V~p~~~~~vVniGd~le~----~~~~R~Si~~F~~ 121 (175)
.+.|.+.....=..|.|..|.+|+.-...+.. ....||++.++..
T Consensus 129 GGEl~~~~~~g~~~Vkp~aG~~vlfps~~lH~v~pVt~G~R~~~~~Wi~ 177 (226)
T PRK05467 129 GGELVIEDTYGEHRVKLPAGDLVLYPSTSLHRVTPVTRGVRVASFFWIQ 177 (226)
T ss_pred CCceEEecCCCcEEEecCCCeEEEECCCCceeeeeccCccEEEEEecHH
Confidence 45587775422368999999999998887766 5678999998865
No 32
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional
Probab=90.01 E-value=6.8 Score=30.80 Aligned_cols=57 Identities=21% Similarity=0.135 Sum_probs=35.0
Q ss_pred eEeeeCCCCCCCCCCccccCCCCCC-----ceEEEecCCCCC-eeEe---eCCeEEEEeecCCeEEEEeccc
Q 047232 43 LLGHYYPACPEPELTMGTDSHADTS-----FLTVLLQDRLGG-LQVL---HENEWVNVTPIHGALVVNLGDM 105 (175)
Q Consensus 43 l~~~~Yp~~~~~~~~~g~~~HtD~g-----~lTiL~qd~~~G-LqV~---~~g~W~~V~p~~~~~vVniGd~ 105 (175)
..+|+|.+. . +++.|.|-. ..-+-.+=+.+. +.+. +.+.+..+...+|+++|.-|++
T Consensus 118 ~LvN~Y~~G-----~-~mg~H~D~~E~~~~~pI~SvSLG~~~~F~~~~~~~~~~~~~l~L~~Gdllvm~G~s 183 (213)
T PRK15401 118 CLINRYAPG-----A-KLSLHQDKDERDFRAPIVSVSLGLPAVFQFGGLKRSDPLQRILLEHGDVVVWGGPS 183 (213)
T ss_pred EEEEeccCc-----C-ccccccCCCcccCCCCEEEEeCCCCeEEEecccCCCCceEEEEeCCCCEEEECchH
Confidence 457999863 2 789999942 111111111111 2222 1256899999999999999985
No 33
>TIGR02466 conserved hypothetical protein. This family consists of uncharacterized proteins in Caulobacter crescentus CB15, Bdellovibrio bacteriovorus HD100, Synechococcus sp. WH 8102 (2), Silicibacter pomeroyi DSS-3 (2), and Hyphomonas neptunium ATCC 15444. The context of nearby genes differs substantially between members and does point to any specific biological role.
Probab=87.56 E-value=8.8 Score=29.85 Aligned_cols=34 Identities=21% Similarity=0.272 Sum_probs=28.7
Q ss_pred CeEEEEeecCCeEEEEecccccc-----CCCCeEEEEEe
Q 047232 86 NEWVNVTPIHGALVVNLGDMMQA-----NVGPRVSVACF 119 (175)
Q Consensus 86 g~W~~V~p~~~~~vVniGd~le~-----~~~~R~Si~~F 119 (175)
..|+.|.|.+|.+|+.=..+... +..+|+|++|=
T Consensus 159 ~~~~~v~P~~G~lvlFPS~L~H~v~p~~~~~~RISiSFN 197 (201)
T TIGR02466 159 QRFVYVPPQEGRVLLFESWLRHEVPPNESEEERISVSFN 197 (201)
T ss_pred CccEEECCCCCeEEEECCCCceecCCCCCCCCEEEEEEe
Confidence 46889999999999998887776 56799999984
No 34
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A ....
Probab=86.34 E-value=6.8 Score=29.45 Aligned_cols=60 Identities=20% Similarity=0.216 Sum_probs=33.7
Q ss_pred eeEeeeCCCCCCCCCCccccCCCCCCce---EEEec--C-CCCCeeEeeC---CeEEEEeecCCeEEEEeccccc
Q 047232 42 FLLGHYYPACPEPELTMGTDSHADTSFL---TVLLQ--D-RLGGLQVLHE---NEWVNVTPIHGALVVNLGDMMQ 107 (175)
Q Consensus 42 ~l~~~~Yp~~~~~~~~~g~~~HtD~g~l---TiL~q--d-~~~GLqV~~~---g~W~~V~p~~~~~vVniGd~le 107 (175)
...+|+|.+. . ++++|.|...+ ..+.. = ...-+.+... +..+.+...+|+++|.-|++=.
T Consensus 98 ~~liN~Y~~g-----~-~i~~H~D~~~~~~~~~I~slSLG~~~~~~f~~~~~~~~~~~~~L~~gsl~vm~g~~r~ 166 (194)
T PF13532_consen 98 QCLINYYRDG-----S-GIGPHSDDEEYGFGPPIASLSLGSSRVFRFRNKSDDDEPIEVPLPPGSLLVMSGEARY 166 (194)
T ss_dssp EEEEEEESST-----T--EEEE---TTC-CCSEEEEEEEES-EEEEEEECGGTS-EEEEEE-TTEEEEEETTHHH
T ss_pred EEEEEecCCC-----C-CcCCCCCcccccCCCcEEEEEEccCceEEEeeccCCCccEEEEcCCCCEEEeChHHhh
Confidence 3457999872 4 79999998733 11111 0 1112344432 6899999999999999998743
No 35
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A.
Probab=82.99 E-value=2.3 Score=28.86 Aligned_cols=33 Identities=21% Similarity=0.285 Sum_probs=24.5
Q ss_pred CeEEEEeecCCeEEEEecccccc-----CCCCeEEEEE
Q 047232 86 NEWVNVTPIHGALVVNLGDMMQA-----NVGPRVSVAC 118 (175)
Q Consensus 86 g~W~~V~p~~~~~vVniGd~le~-----~~~~R~Si~~ 118 (175)
..+..++|.+|.+||.=+.+... +..+|+||+|
T Consensus 63 ~~~~~~~p~~G~lvlFPs~l~H~v~p~~~~~~Risisf 100 (101)
T PF13759_consen 63 SPYYIVEPEEGDLVLFPSWLWHGVPPNNSDEERISISF 100 (101)
T ss_dssp -SEEEE---TTEEEEEETTSEEEE----SSS-EEEEEE
T ss_pred CceEEeCCCCCEEEEeCCCCEEeccCcCCCCCEEEEEc
Confidence 57888999999999999988877 5678999997
No 36
>TIGR00568 alkb DNA alkylation damage repair protein AlkB. Proteins in this family have an as of yet undetermined function in the repair of alkylation damage to DNA. Alignment and family designation based on phylogenomic analysis of Jonathan A. Eisen (PhD Thesis, Stanford University, 1999).
Probab=79.12 E-value=25 Score=26.51 Aligned_cols=56 Identities=18% Similarity=0.105 Sum_probs=33.1
Q ss_pred eEeeeCCCCCCCCCCccccCCCCCCceE---EEe--cCCCCC-eeEee---CCeEEEEeecCCeEEEEecc
Q 047232 43 LLGHYYPACPEPELTMGTDSHADTSFLT---VLL--QDRLGG-LQVLH---ENEWVNVTPIHGALVVNLGD 104 (175)
Q Consensus 43 l~~~~Yp~~~~~~~~~g~~~HtD~g~lT---iL~--qd~~~G-LqV~~---~g~W~~V~p~~~~~vVniGd 104 (175)
..+|+|++. -+++.|.|-.-+. .+. +=+.+. +.+.. ++....+...+|+++|.-|+
T Consensus 97 ~LvN~Y~~G------d~mg~H~D~~e~~~~~pI~SvSLG~~r~F~~~~~~~~~~~~~l~L~sGsllvM~G~ 161 (169)
T TIGR00568 97 CLVNRYAPG------ATLSLHQDRDEPDLRAPLLSVSLGLPAIFLIGGLKRNDPPKRLRLHSGDVVIMGGE 161 (169)
T ss_pred EEEEeecCC------CccccccccccccCCCCEEEEeCCCCEEEEecCCcCCCceEEEEeCCCCEEEECCc
Confidence 458999874 2589999952221 010 101111 22221 25588888999999999886
No 37
>PF08699 DUF1785: Domain of unknown function (DUF1785); InterPro: IPR014811 This region is found in argonaute [] proteins and often co-occurs with IPR003103 from INTERPRO and IPR003165 from INTERPRO. ; PDB: 1R6Z_P 3MJ0_A 4EI1_A 4F3T_A 4EI3_A 1R4K_A.
Probab=44.66 E-value=48 Score=19.76 Aligned_cols=24 Identities=33% Similarity=0.696 Sum_probs=21.0
Q ss_pred CCeeEeeCCeEEEEeecCCeEEEEe
Q 047232 78 GGLQVLHENEWVNVTPIHGALVVNL 102 (175)
Q Consensus 78 ~GLqV~~~g~W~~V~p~~~~~vVni 102 (175)
.|||+++ |=..+|.|..+.+++|+
T Consensus 19 ~Gle~~r-G~~qSvRp~~~~l~lNv 42 (52)
T PF08699_consen 19 GGLEAWR-GFFQSVRPTQGGLLLNV 42 (52)
T ss_dssp TTEEEEE-EEEEEEEEETTEEEEEE
T ss_pred CcEEEeE-eEEeeeEEcCCCCEEEE
Confidence 5899986 68889999999999998
No 38
>PLN00052 prolyl 4-hydroxylase; Provisional
Probab=44.31 E-value=1.9e+02 Score=24.11 Aligned_cols=36 Identities=19% Similarity=0.284 Sum_probs=23.0
Q ss_pred EEEeecCCeEEEEe-------cccccc------CCCCeEEEEEeeccCC
Q 047232 89 VNVTPIHGALVVNL-------GDMMQA------NVGPRVSVACFFRSHF 124 (175)
Q Consensus 89 ~~V~p~~~~~vVni-------Gd~le~------~~~~R~Si~~F~~p~~ 124 (175)
+.|.|..|..++.- +|.... ....++++.-+++-..
T Consensus 206 l~VkPkkG~ALlF~nl~~dG~~D~~SlHagcPVi~G~Kw~atkWi~~~~ 254 (310)
T PLN00052 206 LAVKPVKGDAVLFFSLHIDGVPDPLSLHGSCPVIEGEKWSAPKWIHIRS 254 (310)
T ss_pred eEeccCcceEEEEeccCCCCCCCcccccCCCeeecCeEEEEEEeeeccc
Confidence 78899988866632 222222 3457888888877643
No 39
>PF02678 Pirin: Pirin; InterPro: IPR003829 This entry represents N-terminal domain of Pirin proteins from both eukaryotes and prokaryotes. The function of Pirin is unknown but the gene coding for this protein is known to be expressed in all tissues in the human body although it is expressed most strongly in the liver and heart. Pirin is known to be a nuclear protein, exclusively localised within the nucleoplasma and predominantly concentrated within dot-like subnuclear structures []. Pirin is composed of two structurally similar domains arranged face to face. The N-terminal domain additionally features four beta-strands, and the C-terminal domain also includes four additional -strands and a short alpha-helix. Although the two domains are similar, the C-terminal domain of Pirin differs from the N-terminal domain as it does not contain a metal binding site and its sequence does not contain the conserved metal-coordinating residues []. Pirin is confirmed to be a member of the cupin superfamily on the basis of primary sequence and structural similarity. The presence of a metal binding site in the N-terminal beta-barrel of Pirin, may be significant in its role in regulating NFI DNA replication and NF-kappaB transcription factor activity []. Pirin structure has been found to closely resemble members of the cupin superfamily. Pirin contains the two characteristic sequences of the cupin superfamily, namely PG-(X)5-HXH-(X)4-E-(X)6-G and G-(X)5-PXG-(X)2-H-(X)3-N separated by a variable stretch of 15-50 amino acids. These motifs are best conserved in the N-terminal where the conserved histidine and glutamic acid residues correspond to the metal-coordinating residues. The C-terminal domain motifs lack the metal binding residues normally associated with the cupin fold []. Pirin was identified to be a metal-binding protein [], and was found that the metal-binding residues of Pirins are highly conserved across mammals, plants, fungi, and prokaryotic organisms. Pirin acts as a cofactor for the transcription factor NFI, the regulatory mechanism of which is generally believed to require the assistance of a metal ion []. Structural data supports the hypothesis that the bound iron of Pirin may participate in this transcriptional regulation by enhancing and stabilising the formation of the p50,Bcl3,DNA complex []. Metals have been implicated directly or indirectly in the NF-kappaB family of transcription factors that control expression of a number of early response genes associated with inflammatory responses, cell growth, cell cycle progression, and neoplastic transformation []. However, most metal-dependent transcription factors are DNA-binding proteins that bind to specific sequences when the metal binds to the protein. Pirin, on the other hand, appears to function differently and bind to the transcription factor DNA complex [].; PDB: 2VEC_A 1J1L_A 3ACL_A 2P17_A 1TQ5_A.
Probab=42.37 E-value=24 Score=24.50 Aligned_cols=19 Identities=16% Similarity=0.232 Sum_probs=16.9
Q ss_pred CCccccCCCCCCceEEEec
Q 047232 56 LTMGTDSHADTSFLTVLLQ 74 (175)
Q Consensus 56 ~~~g~~~HtD~g~lTiL~q 74 (175)
..++.-+|.++.++|.+++
T Consensus 40 ~gf~~HPH~g~eivTyv~~ 58 (107)
T PF02678_consen 40 AGFPMHPHRGFEIVTYVLE 58 (107)
T ss_dssp TEEEEEEECSEEEEEEEEE
T ss_pred CCCCCcCCCCceEEEEEec
Confidence 4578899999999999997
No 40
>PF01361 Tautomerase: Tautomerase enzyme; InterPro: IPR004370 4-Oxalocrotonate tautomerase (4-OT) catalyzes the isomerisation of beta,gamma-unsaturated enones to their alpha,beta-isomers. The enzyme is part of a plasmid-encoded pathway, which enables bacteria harbouring the plasmid to use various aromatic hydrocarbons as their sole sources of carbon and energy. The enzyme is a barrel-shaped hexamer, which can be viewed as a trimer of dimers. The hexamer contains a hydrophobic core formed by three beta-sheets and surrounded by three pairs of alpha-helices. Each 4-OT monomer of 62 amino acids has a relatively simple beta-alpha-beta fold as described by the structure of the enzyme from Pseudomonas putida []. The monomer begins with a conserved proline at the start of a beta-strand, followed by an alpha-helix and a 310 helix preceding a second parallel beta-strand, and ends with a beta-hairpin near the C terminus. The dimer results from antiparallel interactions between the beta-sheets and alpha-helices of the two monomers, forming a four-stranded beta-sheet with antiparallel alpha-helices on one side, creating two active sites, one at each end of the beta-sheet. Three dimers further associate to form a hexamer by the interactions of the strands of the C-terminal beta-hairpin loops with the edges of the four-stranded beta-sheets of neighbouring dimers, creating a series of cross-links that stabilise the hexamer Pro-1 of the mature protein functions as the general base while Arg-39 and an ordered water molecule each provide a hydrogen bond to the C-2 oxygen of substrate. Arg-39 plays an additional role in the binding of the C-1 carboxylate group. Arg-11 participates both in substrate binding and in catalysis. It interacts with the C-6 carboxylate group, thereby holding the substrate in place and drawing electron density to the C-5 position. The hydrophobic nature of the active site, which lowers the pKa of Pro-1 and provides a favourable environment for catalysis, is largely maintained by Phe-50. Because several Arg residues located near the active site are not conserved among all members of this family and because of the presence of fairly distantly related paralogs in Campylobacter jejuni, the family is regarded as not necessarily uniform in function.; GO: 0016853 isomerase activity, 0006725 cellular aromatic compound metabolic process; PDB: 4OTA_H 4OTC_G 4OTB_J 2FM7_A 1BJP_B 1S0Y_K 3EJ9_E 3EJ7_K 3EJ3_I 3MB2_A ....
Probab=41.20 E-value=45 Score=19.94 Aligned_cols=25 Identities=28% Similarity=0.527 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcccc
Q 047232 8 KKTTELALTLFELISEALGLNANRL 32 (175)
Q Consensus 8 ~~~~~l~~~ll~~la~~Lgl~~~~~ 32 (175)
++-.+++..|..++.+.||.+.+.+
T Consensus 14 e~K~~l~~~it~~~~~~lg~~~~~i 38 (60)
T PF01361_consen 14 EQKRELAEAITDAVVEVLGIPPERI 38 (60)
T ss_dssp HHHHHHHHHHHHHHHHHHTS-GGGE
T ss_pred HHHHHHHHHHHHHHHHHhCcCCCeE
Confidence 4567899999999999999997643
No 41
>PF11876 DUF3396: Protein of unknown function (DUF3396); InterPro: IPR021815 This family of proteins are functionally uncharacterised. This protein is found in bacteria and viruses. Proteins in this family are typically between 302 to 382 amino acids in length.
Probab=39.08 E-value=12 Score=29.24 Aligned_cols=97 Identities=23% Similarity=0.365 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHcCCCcccc----cc-c---ccCCce-eeEeeeCCCCCCCCC-Cc---cc-cCCCCCCceEEEec---
Q 047232 12 ELALTLFELISEALGLNANRL----KD-M---DCAEGL-FLLGHYYPACPEPEL-TM---GT-DSHADTSFLTVLLQ--- 74 (175)
Q Consensus 12 ~l~~~ll~~la~~Lgl~~~~~----~~-~---~~~~~~-~l~~~~Yp~~~~~~~-~~---g~-~~HtD~g~lTiL~q--- 74 (175)
+.-..++..+|+.|....++- .- . ...... .....+||..+-++. .. .+ ..=...+.+|+|-+
T Consensus 39 ~~~~~l~~~~a~~L~~~~G~aGl~~~~~~~~~~~~~~~ey~la~rfpGldv~~~~~~~~~~~~~~Ik~v~WlT~Lg~~~l 118 (208)
T PF11876_consen 39 GHFRALFLELAERLPPSHGYAGLAFNLPPYSRSENEPLEYALAQRFPGLDVGDPSTFESRDLGDGIKGVNWLTFLGDPLL 118 (208)
T ss_pred HHHHHHHHHHHHHCCCCeEeeEEEEecCCcccccccHHHHHHHHHCCCCCCCCchhhhhHHhccCCCCcchhheeCHHHH
Confidence 335666777788886665431 10 0 011111 112345666543221 11 11 22345689999977
Q ss_pred CCCCCeeEee---CCeEEEEeecCCeEEEEecccccc
Q 047232 75 DRLGGLQVLH---ENEWVNVTPIHGALVVNLGDMMQA 108 (175)
Q Consensus 75 d~~~GLqV~~---~g~W~~V~p~~~~~vVniGd~le~ 108 (175)
+..+|.+..+ ++.|+.+.+-.+.+||.+|+.=+.
T Consensus 119 ~~LGG~~~lr~~L~~~~~~i~~~~~g~vI~aG~~P~l 155 (208)
T PF11876_consen 119 EKLGGEDALRSALPGPWIRIHPYGGGVVIQAGEWPEL 155 (208)
T ss_pred HhhccHHHHHhhCCCCceEEEECCCcEEEEeCCCCCC
Confidence 3678877543 489999999999999999986555
No 42
>COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzymes [Carbohydrate transport and metabolism / General function prediction only]
Probab=38.72 E-value=96 Score=24.35 Aligned_cols=36 Identities=28% Similarity=0.422 Sum_probs=25.6
Q ss_pred EEEecCCCCCeeEee--CCeEEEEeecCCeEEEEeccc
Q 047232 70 TVLLQDRLGGLQVLH--ENEWVNVTPIHGALVVNLGDM 105 (175)
Q Consensus 70 TiL~qd~~~GLqV~~--~g~W~~V~p~~~~~vVniGd~ 105 (175)
.++.|+..+-..+.. .|.=+.|||.=+..++|+||.
T Consensus 115 ~m~v~~~~G~~~v~~~~~Gd~iyVPp~~gH~t~N~Gd~ 152 (209)
T COG2140 115 RMLVQKPEGEARVIAVRAGDVIYVPPGYGHYTINTGDE 152 (209)
T ss_pred EEEEEcCCCcEEEEEecCCcEEEeCCCcceEeecCCCC
Confidence 344454444455543 488999999999999999983
No 43
>PRK02289 4-oxalocrotonate tautomerase; Provisional
Probab=38.18 E-value=52 Score=19.91 Aligned_cols=25 Identities=16% Similarity=0.210 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcccc
Q 047232 8 KKTTELALTLFELISEALGLNANRL 32 (175)
Q Consensus 8 ~~~~~l~~~ll~~la~~Lgl~~~~~ 32 (175)
++-.+|+..|.+++++.+|.|++.+
T Consensus 15 EqK~~L~~~it~a~~~~~~~p~~~v 39 (60)
T PRK02289 15 EQKNALAREVTEVVSRIAKAPKEAI 39 (60)
T ss_pred HHHHHHHHHHHHHHHHHhCcCcceE
Confidence 4567899999999999999987653
No 44
>PF12791 RsgI_N: Anti-sigma factor N-terminus; InterPro: IPR024449 The heat shock genes in Bacillus subtilis can be classified into several groups according to their regulation [], and the sigma gene, sigI, of Bacillus subtilis belongs to the group IV heat-shock response genes and has many orthologues in the bacterial phylum Firmicutes []. Regulation of sigma factor I is carried out by RsgI from the same operon. This entry represents the N-terminal cytoplasmic portion of RsgI ('upstream' of the single transmembrane helix) which has been shown to interact directly with Sigma-I [].
Probab=37.52 E-value=26 Score=20.97 Aligned_cols=24 Identities=21% Similarity=0.538 Sum_probs=19.8
Q ss_pred Eee-CCeEEEEeecCCeEEEEecccccc
Q 047232 82 VLH-ENEWVNVTPIHGALVVNLGDMMQA 108 (175)
Q Consensus 82 V~~-~g~W~~V~p~~~~~vVniGd~le~ 108 (175)
|++ +|+++.|+..++ +.+|+..+.
T Consensus 10 VlT~dGeF~~ik~~~~---~~vG~eI~~ 34 (56)
T PF12791_consen 10 VLTPDGEFIKIKRKPG---MEVGQEIEF 34 (56)
T ss_pred EEcCCCcEEEEeCCCC---CcccCEEEE
Confidence 444 499999998888 899998887
No 45
>smart00460 TGc Transglutaminase/protease-like homologues. Transglutaminases are enzymes that establish covalent links between proteins. A subset of transglutaminase homologues appear to catalyse the reverse reaction, the hydrolysis of peptide bonds. Proteins with this domain are both extracellular and intracellular, and it is likely that the eukaryotic intracellular proteins are involved in signalling events.
Probab=35.89 E-value=37 Score=20.50 Aligned_cols=16 Identities=38% Similarity=0.650 Sum_probs=12.7
Q ss_pred eeEeeCCeEEEEeecC
Q 047232 80 LQVLHENEWVNVTPIH 95 (175)
Q Consensus 80 LqV~~~g~W~~V~p~~ 95 (175)
+||..+++|+.+.|.+
T Consensus 53 ~ev~~~~~W~~~D~~~ 68 (68)
T smart00460 53 AEVYLEGGWVPVDPTP 68 (68)
T ss_pred EEEEECCCeEEEeCCC
Confidence 5777789999998754
No 46
>PRK01964 4-oxalocrotonate tautomerase; Provisional
Probab=35.28 E-value=58 Score=19.81 Aligned_cols=24 Identities=29% Similarity=0.344 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccc
Q 047232 8 KKTTELALTLFELISEALGLNANR 31 (175)
Q Consensus 8 ~~~~~l~~~ll~~la~~Lgl~~~~ 31 (175)
++-.+++..|.+++++.||++++.
T Consensus 15 eqk~~l~~~it~~l~~~lg~p~~~ 38 (64)
T PRK01964 15 EKIKNLIREVTEAISATLDVPKER 38 (64)
T ss_pred HHHHHHHHHHHHHHHHHhCcChhh
Confidence 456789999999999999999864
No 47
>TIGR00370 conserved hypothetical protein TIGR00370.
Probab=34.80 E-value=62 Score=25.15 Aligned_cols=40 Identities=15% Similarity=0.259 Sum_probs=21.1
Q ss_pred CceEEEec-CCCCCeeEe--eCCeEEEEeecCCeEEEEeccccc
Q 047232 67 SFLTVLLQ-DRLGGLQVL--HENEWVNVTPIHGALVVNLGDMMQ 107 (175)
Q Consensus 67 g~lTiL~q-d~~~GLqV~--~~g~W~~V~p~~~~~vVniGd~le 107 (175)
|..|-++. +..+|.|+- ++-.|.+.. .....+...||.++
T Consensus 158 g~qt~IYp~~sPGGW~iIGrTp~~lfd~~-~~~p~ll~~GD~Vr 200 (202)
T TIGR00370 158 GLQTGVYPISTPGGWQLIGKTPLALFDPQ-ENPPTLLRAGDIVK 200 (202)
T ss_pred ccceEEEccCCCCcceEeeecchhhhCCC-CCCCcccCCCCEEE
Confidence 45566663 456777774 333332221 23446777777654
No 48
>cd00491 4Oxalocrotonate_Tautomerase 4-Oxalocrotonate Tautomerase: Catalyzes the isomerization of unsaturated ketones. The structure is a homohexamer that is arranged as a trimer of dimers. The hexamer contains six active sites, each formed by residues from three monomers, two from one dimer and the third from a neighboring monomer. Each monomer is a beta-alpha-beta fold with two small beta strands at the C-terminus that fold back on themselves. A pair of monomers form a dimer with two-fold symmetry, consisting of a 4-stranded beta sheet with two helices on one side and two additional small beta strands at each end. The dimers are assembled around a 3-fold axis of rotation to form a hexamer, with the short beta strands from each dimer contacting the neighboring dimers.
Probab=34.12 E-value=68 Score=18.76 Aligned_cols=24 Identities=29% Similarity=0.342 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccc
Q 047232 8 KKTTELALTLFELISEALGLNANR 31 (175)
Q Consensus 8 ~~~~~l~~~ll~~la~~Lgl~~~~ 31 (175)
++-++++..|.+++++.+|.+++.
T Consensus 14 eqk~~l~~~i~~~l~~~~g~~~~~ 37 (58)
T cd00491 14 EQKRELIERVTEAVSEILGAPEAT 37 (58)
T ss_pred HHHHHHHHHHHHHHHHHhCcCccc
Confidence 466789999999999999999754
No 49
>PF11548 Receptor_IA-2: Protein-tyrosine phosphatase receptor IA-2; InterPro: IPR021613 IA-2 is a protein-tyrosine phosphatase receptor that upon exocytosis, the cytoplasmic domain is cleaved and moves to the nucleus where it enhances transcription of the insulin gene. The mature exodomain of IA-2 participates in adhesion to the extracellular matrix and is self-proteolyzed in vitro by reactive oxygen species which may be a new shedding mechanism. ; PDB: 2QT7_B 3N01_B 3N4W_B 3NG8_A.
Probab=33.95 E-value=39 Score=22.93 Aligned_cols=33 Identities=15% Similarity=0.184 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHcCCCcccccccc-cCCceeeEe
Q 047232 13 LALTLFELISEALGLNANRLKDMD-CAEGLFLLG 45 (175)
Q Consensus 13 l~~~ll~~la~~Lgl~~~~~~~~~-~~~~~~l~~ 45 (175)
=+.+|++.+|+.|+|+.+.|.+.. ..+...+|+
T Consensus 18 ~G~~l~~~la~~l~l~s~~F~~i~V~g~avTFrv 51 (91)
T PF11548_consen 18 EGSRLMEKLAELLHLPSSSFINISVVGPAVTFRV 51 (91)
T ss_dssp HHHHHHHHHHHHHTS-GGGEEEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHHhCCCcccceeeeecCceEEEEe
Confidence 367899999999999999998753 223334444
No 50
>PRK02220 4-oxalocrotonate tautomerase; Provisional
Probab=33.59 E-value=64 Score=19.24 Aligned_cols=24 Identities=17% Similarity=0.213 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccc
Q 047232 8 KKTTELALTLFELISEALGLNANR 31 (175)
Q Consensus 8 ~~~~~l~~~ll~~la~~Lgl~~~~ 31 (175)
++-.+++..|.+.+++.+|++++.
T Consensus 15 eqk~~l~~~it~~l~~~~~~p~~~ 38 (61)
T PRK02220 15 EQLKALVKDVTAAVSKNTGAPAEH 38 (61)
T ss_pred HHHHHHHHHHHHHHHHHhCcChhh
Confidence 456789999999999999998754
No 51
>TIGR00013 taut 4-oxalocrotonate tautomerase family enzyme. 4-oxalocrotonate tautomerase is a homohexamer in which each monomer is very small, at about 62 amino acids. Pro-1 of the mature protein serves as a general base. The enzyme functions in meta-cleavage pathways of aromatic hydrocarbon catabolism. Because several Arg residues located near the active site in the crystal structure of Pseudomonas putida are not conserved among all members of this family, because the literature describes a general role in the isomerization of beta,gamma-unsaturated enones to their alpha,beta-isomers, and because of the presence of fairly distantly related paralogs in Campylobacter jejuni, the family is regarded as not necessarily uniform in function.
Probab=31.85 E-value=78 Score=18.94 Aligned_cols=24 Identities=25% Similarity=0.364 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccc
Q 047232 8 KKTTELALTLFELISEALGLNANR 31 (175)
Q Consensus 8 ~~~~~l~~~ll~~la~~Lgl~~~~ 31 (175)
++-.++++.|.+++++.||.+++.
T Consensus 15 eqK~~l~~~it~~l~~~lg~~~~~ 38 (63)
T TIGR00013 15 EQKRQLIEGVTEAMAETLGANLES 38 (63)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccc
Confidence 456788999999999999999764
No 52
>PRK01271 4-oxalocrotonate tautomerase; Provisional
Probab=31.32 E-value=74 Score=20.65 Aligned_cols=25 Identities=16% Similarity=0.292 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcccc
Q 047232 8 KKTTELALTLFELISEALGLNANRL 32 (175)
Q Consensus 8 ~~~~~l~~~ll~~la~~Lgl~~~~~ 32 (175)
++-.+++..|.+++++.||.+++.+
T Consensus 16 EqK~~La~~iT~a~~~~lg~~~e~v 40 (76)
T PRK01271 16 EQKAALAADITDVIIRHLNSKDSSI 40 (76)
T ss_pred HHHHHHHHHHHHHHHHHhCcCcceE
Confidence 4567899999999999999998754
No 53
>PRK00745 4-oxalocrotonate tautomerase; Provisional
Probab=31.06 E-value=77 Score=18.94 Aligned_cols=25 Identities=16% Similarity=0.287 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcccc
Q 047232 8 KKTTELALTLFELISEALGLNANRL 32 (175)
Q Consensus 8 ~~~~~l~~~ll~~la~~Lgl~~~~~ 32 (175)
++-.+++..|.+++.+.+|.+++.+
T Consensus 15 eqk~~l~~~it~~l~~~~~~p~~~v 39 (62)
T PRK00745 15 EQKRKLVEEITRVTVETLGCPPESV 39 (62)
T ss_pred HHHHHHHHHHHHHHHHHcCCChhHE
Confidence 4567899999999999999998643
No 54
>PTZ00397 macrophage migration inhibition factor-like protein; Provisional
Probab=28.83 E-value=78 Score=21.84 Aligned_cols=24 Identities=13% Similarity=0.387 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccc
Q 047232 8 KKTTELALTLFELISEALGLNANR 31 (175)
Q Consensus 8 ~~~~~l~~~ll~~la~~Lgl~~~~ 31 (175)
++-.+++..|.+.+++.||++++.
T Consensus 72 e~k~~l~~~i~~~l~~~lgi~~~r 95 (116)
T PTZ00397 72 SNNSSIAAAITKILASHLKVKSER 95 (116)
T ss_pred HHHHHHHHHHHHHHHHHhCcCccc
Confidence 456789999999999999999864
No 55
>COG2879 Uncharacterized small protein [Function unknown]
Probab=28.48 E-value=60 Score=20.44 Aligned_cols=21 Identities=14% Similarity=0.205 Sum_probs=17.7
Q ss_pred CCCCccHHHHHHHHHhcCCCC
Q 047232 146 IYKEITVKEYLSHSYSIGLDG 166 (175)
Q Consensus 146 ~y~~~~~~dy~~~~~~~~~~~ 166 (175)
.-+++|++||.+.+....+.+
T Consensus 38 d~p~mT~~EFfrec~daRy~~ 58 (65)
T COG2879 38 DKPPMTYEEFFRECQDARYGG 58 (65)
T ss_pred CCCcccHHHHHHHHHHhhcCC
Confidence 346899999999999988766
No 56
>PF08921 DUF1904: Domain of unknown function (DUF1904); InterPro: IPR015017 This entry represents a family of hypothetical bacterial proteins. ; PDB: 1U9D_B.
Probab=26.28 E-value=92 Score=21.68 Aligned_cols=26 Identities=19% Similarity=0.337 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccccc
Q 047232 8 KKTTELALTLFELISEALGLNANRLK 33 (175)
Q Consensus 8 ~~~~~l~~~ll~~la~~Lgl~~~~~~ 33 (175)
+.+.+++..|+.-||+..+.+.+.|.
T Consensus 12 e~v~~~S~~LideLa~i~~~p~e~ft 37 (108)
T PF08921_consen 12 EQVQELSKELIDELAEICGCPRENFT 37 (108)
T ss_dssp HHHHHHHHHHHHHHHHHHT--GGG-E
T ss_pred HHHHHHhHHHHHHHHHHHCCCcceEE
Confidence 46789999999999999999998765
No 57
>PF01187 MIF: Macrophage migration inhibitory factor (MIF); InterPro: IPR001398 Macrophage migration inhibitory factor (MIF) is a key regulatory cytokine within innate and adaptive immune responses, capable of promoting and modulating the magnitude of the response []. MIF is released from T-cells and macrophages, and acts within the neuroendocrine system. MIF is capable of tautomerase activity, although its biological function has not been fully characterised. It is induced by glucocorticoid and is capable of overriding the anti-inflammatory actions of glucocorticoid []. MIF regulates cytokine secretion and the expression of receptors involved in the immune response. It can be taken up into target cells in order to interact with intracellular signalling molecules, inhibiting p53 function, and/or activating components of the mitogen-activated protein kinase and Jun-activation domain-binding protein-1 (Jab-1) []. MIF has been linked to various inflammatory diseases, such as rheumatoid arthritis and atherosclerosis []. The MIF homologue D-dopachrome tautomerase (4.1.1.84 from EC) is involved in detoxification through the conversion of dopaminechrome (and possibly norepinephrinechrome), the toxic quinine product of the neurotransmitter dopamine (and norepinephrine), to an indole derivative that can serve as a precursor to neuromelanin [, ].; PDB: 1UIZ_C 3FWT_A 1HFO_F 2WKB_D 3RF4_B 2OS5_A 3RF5_A 2XCZ_A 3FWU_A 3B64_A ....
Probab=24.72 E-value=1e+02 Score=21.28 Aligned_cols=24 Identities=21% Similarity=0.522 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccc
Q 047232 8 KKTTELALTLFELISEALGLNANR 31 (175)
Q Consensus 8 ~~~~~l~~~ll~~la~~Lgl~~~~ 31 (175)
+...+++..|...+.+.||++.+.
T Consensus 70 ~~n~~~s~~i~~~l~~~LgIp~~R 93 (114)
T PF01187_consen 70 EQNKKYSAAITEFLEEELGIPPDR 93 (114)
T ss_dssp HHHHHHHHHHHHHHHHHHT--GGG
T ss_pred HHHHHHHHHHHHHHHHHhCCCcCc
Confidence 456789999999999999999864
No 58
>PF06560 GPI: Glucose-6-phosphate isomerase (GPI); InterPro: IPR010551 This entry consists of several bacterial and archaeal glucose-6-phosphate isomerase (GPI) proteins (5.3.1.9 from EC), which are involved in glycolysis and in gluconeogenesis and catalyse the conversion of D-glucose 6-phosphate to D-fructose 6-phosphate. The deduced amino acid sequence of the first archaeal PGI isolated from Pyrococcus furiosus revealed that it is not related to its eukaryotic and many of its bacterial counterparts. In contrast, this archaeal PGI shares similarity with the cupin superfamily that consists of a variety of proteins that are generally involved in sugar metabolism in both prokaryotes and eukaryotes [].; GO: 0004347 glucose-6-phosphate isomerase activity, 0006094 gluconeogenesis, 0006096 glycolysis, 0005737 cytoplasm; PDB: 1J3Q_B 1J3R_B 1J3P_A 2GC0_A 1X8E_A 1X82_A 1QY4_B 2GC2_B 1QXJ_A 1QXR_B ....
Probab=23.80 E-value=1.6e+02 Score=22.59 Aligned_cols=47 Identities=23% Similarity=0.239 Sum_probs=25.4
Q ss_pred CceEEEecCCCCCeeE-------eeCCeEEEEeecCCeEEEEeccccccCCCCeEEEEEeec
Q 047232 67 SFLTVLLQDRLGGLQV-------LHENEWVNVTPIHGALVVNLGDMMQANVGPRVSVACFFR 121 (175)
Q Consensus 67 g~lTiL~qd~~~GLqV-------~~~g~W~~V~p~~~~~vVniGd~le~~~~~R~Si~~F~~ 121 (175)
|-=.+|+|+ ..|.+| ...|+-+-|||-=+..+||+|| +-++++..+.
T Consensus 92 G~g~~lLq~-~~~~~~~~~~~v~~~~G~~v~IPp~yaH~tIN~g~-------~~L~~~~~~~ 145 (182)
T PF06560_consen 92 GEGLILLQK-EEGDDVGDVIAVEAKPGDVVYIPPGYAHRTINTGD-------EPLVFAAWVP 145 (182)
T ss_dssp SSEEEEEE--TTS-----EEEEEE-TTEEEEE-TT-EEEEEE-SS-------S-EEEEEEEE
T ss_pred CEEEEEEEe-cCCCcceeEEEEEeCCCCEEEECCCceEEEEECCC-------CcEEEEEEEe
Confidence 444567775 344221 2358888898888889999996 4455555443
No 59
>PTZ00450 macrophage migration inhibitory factor-like protein; Provisional
Probab=23.53 E-value=1.1e+02 Score=21.32 Aligned_cols=24 Identities=21% Similarity=0.328 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccc
Q 047232 8 KKTTELALTLFELISEALGLNANR 31 (175)
Q Consensus 8 ~~~~~l~~~ll~~la~~Lgl~~~~ 31 (175)
+...+++..|...+.+.||++.+.
T Consensus 72 ~~n~~~s~~i~~~l~~~LgIp~dR 95 (113)
T PTZ00450 72 SKPKMMTPRITAAITKECGIPAER 95 (113)
T ss_pred HHHHHHHHHHHHHHHHHcCCCccc
Confidence 456789999999999999999864
No 60
>TIGR01565 homeo_ZF_HD homeobox domain, ZF-HD class. This model represents a class of homoebox domain that differs substantially from the typical homoebox domain described in pfam model pfam00046. It is found in both C4 and C3 plants.
Probab=23.45 E-value=54 Score=20.20 Aligned_cols=32 Identities=19% Similarity=0.127 Sum_probs=22.5
Q ss_pred HHHHHHHHHH----HHHHHHHHHHHHcCCCcccccc
Q 047232 3 IVDHAKKTTE----LALTLFELISEALGLNANRLKD 34 (175)
Q Consensus 3 ~~~y~~~~~~----l~~~ll~~la~~Lgl~~~~~~~ 34 (175)
|++++....- ........+|..|||++..+.-
T Consensus 16 Le~~fe~~~y~~~~~~~~~r~~la~~lgl~~~vvKV 51 (58)
T TIGR01565 16 MRDFAEKLGWKLKDKRREEVREFCEEIGVTRKVFKV 51 (58)
T ss_pred HHHHHHHcCCCCCCCCHHHHHHHHHHhCCCHHHeee
Confidence 4555555554 6677788899999999876544
No 61
>PF01104 Bunya_NS-S: Bunyavirus non-structural protein NS-s; InterPro: IPR000797 The NSS proteins are encoded in the S RNA from ssRNA negative-strand viruses []. The S RNA also codes for the nucleoprotein N. The two main products are read from overlapping reading frames in the viral complementary sequence. ; GO: 0016032 viral reproduction
Probab=23.09 E-value=2.5e+02 Score=19.03 Aligned_cols=45 Identities=11% Similarity=0.023 Sum_probs=36.1
Q ss_pred CCeEEEEeecCCeEEEEeccccccCCCCeEEEEEeeccCCCCCCceEeecCcc
Q 047232 85 ENEWVNVTPIHGALVVNLGDMMQANVGPRVSVACFFRSHFQSEKARLYGPINE 137 (175)
Q Consensus 85 ~g~W~~V~p~~~~~vVniGd~le~~~~~R~Si~~F~~p~~d~~~~~~i~pl~~ 137 (175)
+-+|..+.-..+-++.|.+ ...-|++|..|.++..- -....++|.
T Consensus 41 Rpkl~s~~~~~~~l~L~L~-----~~~~~~lI~Iflet~~i---q~~tt~Lps 85 (91)
T PF01104_consen 41 RPKLSSVRRRNQRLILLLE-----GGRLRWLITIFLETGTI---QCQTTILPS 85 (91)
T ss_pred cccEEEEEeecCEEEEEEe-----cceeEEEEEEEcCCCcE---EEEEecccc
Confidence 3589999999999999988 78899999999998862 344556654
No 62
>PF10055 DUF2292: Uncharacterized small protein (DUF2292); InterPro: IPR018743 Members of this family of hypothetical bacterial proteins have no known function.
Probab=22.25 E-value=70 Score=17.99 Aligned_cols=13 Identities=23% Similarity=0.360 Sum_probs=10.8
Q ss_pred CCCCceEEEecCC
Q 047232 64 ADTSFLTVLLQDR 76 (175)
Q Consensus 64 tD~g~lTiL~qd~ 76 (175)
..+|.+|+..||+
T Consensus 13 i~yGsV~iiiqdG 25 (38)
T PF10055_consen 13 IRYGSVTIIIQDG 25 (38)
T ss_pred CCcceEEEEEECC
Confidence 4689999999975
No 63
>PF02373 JmjC: JmjC domain, hydroxylase; InterPro: IPR013129 Jumonji protein is required for neural tube formation in mice [].There is evidence of domain swapping within the jumonji family of transcription factors []. This domain is often associated with jmjN (see IPR003349 from INTERPRO) and belongs to the Cupin superfamily [].; PDB: 2YU2_A 2YU1_A 3AVR_A 3AVS_A 2OX0_B 2OQ6_B 2WWJ_A 2Q8D_A 3PDQ_A 2YBK_A ....
Probab=21.65 E-value=91 Score=20.80 Aligned_cols=33 Identities=24% Similarity=0.275 Sum_probs=20.9
Q ss_pred CCCCeeE-eeCCeEEEEeecCCeEEEEecccccc
Q 047232 76 RLGGLQV-LHENEWVNVTPIHGALVVNLGDMMQA 108 (175)
Q Consensus 76 ~~~GLqV-~~~g~W~~V~p~~~~~vVniGd~le~ 108 (175)
+++...+ +..|+-+-++|.-=..++|+|+.+..
T Consensus 77 gi~~~~~~Q~~Ge~V~i~pg~~H~v~n~g~~i~~ 110 (114)
T PF02373_consen 77 GIPVYRFVQKPGEFVFIPPGAYHQVFNLGDNISE 110 (114)
T ss_dssp TS--EEEEEETT-EEEE-TT-EEEEEESSSEEEE
T ss_pred CcccccceECCCCEEEECCCceEEEEeCCceEEE
Confidence 3455554 35799999998777799999987643
No 64
>COG1741 Pirin-related protein [General function prediction only]
Probab=21.01 E-value=2.2e+02 Score=23.26 Aligned_cols=30 Identities=23% Similarity=0.346 Sum_probs=22.4
Q ss_pred CccccCCCCCCceEEEec------CCCCCeeEeeCC
Q 047232 57 TMGTDSHADTSFLTVLLQ------DRLGGLQVLHEN 86 (175)
Q Consensus 57 ~~g~~~HtD~g~lTiL~q------d~~~GLqV~~~g 86 (175)
.++-.||.++.++|.+++ |..+.-++..+|
T Consensus 56 ~f~pHPHrg~etvTyvl~G~i~HrDS~Gn~~~i~pG 91 (276)
T COG1741 56 GFPPHPHRGLETVTYVLDGEIEHRDSLGNKGVIRPG 91 (276)
T ss_pred cCCCCCCCCcEEEEEEEccEEEEeecCCceeeeccc
Confidence 466789999999999998 445555555554
No 65
>PF11142 DUF2917: Protein of unknown function (DUF2917); InterPro: IPR021317 This bacterial family of proteins appears to be restricted to Proteobacteria.
Probab=21.01 E-value=1.5e+02 Score=18.38 Aligned_cols=34 Identities=21% Similarity=0.305 Sum_probs=25.6
Q ss_pred eeEeeCCeEEEEeecCCeEEEEeccccccCCCCe
Q 047232 80 LQVLHENEWVNVTPIHGALVVNLGDMMQANVGPR 113 (175)
Q Consensus 80 LqV~~~g~W~~V~p~~~~~vVniGd~le~~~~~R 113 (175)
|+|...--|+.+...++-.++..||.+.+....|
T Consensus 20 l~v~~G~vWlT~~g~~~D~~L~~G~~l~l~~g~~ 53 (63)
T PF11142_consen 20 LRVESGRVWLTREGDPDDYWLQAGDSLRLRRGGR 53 (63)
T ss_pred EEEccccEEEECCCCCCCEEECCCCEEEeCCCCE
Confidence 4444445799999889999999999888744444
No 66
>COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog [General function prediction only]
Probab=20.74 E-value=1.3e+02 Score=19.21 Aligned_cols=22 Identities=32% Similarity=0.430 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHcCCCccc
Q 047232 10 TTELALTLFELISEALGLNANR 31 (175)
Q Consensus 10 ~~~l~~~ll~~la~~Lgl~~~~ 31 (175)
=.+|+..|.+++++.||.+++.
T Consensus 18 K~~la~~vT~~~~~~lg~~~~~ 39 (69)
T COG1942 18 KAELAAEVTEVTVETLGKDPSA 39 (69)
T ss_pred HHHHHHHHHHHHHHHhCCCccc
Confidence 4689999999999999998754
Done!