Query 047232
Match_columns 175
No_of_seqs 196 out of 1227
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 15:45:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047232.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047232hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1w9y_A 1-aminocyclopropane-1-c 100.0 1E-47 3.5E-52 316.1 10.7 165 1-169 112-299 (319)
2 1gp6_A Leucoanthocyanidin diox 100.0 4.9E-47 1.7E-51 316.1 12.7 163 1-167 167-349 (356)
3 3oox_A Putative 2OG-Fe(II) oxy 100.0 3.3E-46 1.1E-50 306.2 14.8 158 1-162 129-308 (312)
4 1odm_A Isopenicillin N synthas 100.0 5.9E-44 2E-48 295.0 13.6 156 2-163 141-324 (331)
5 1dcs_A Deacetoxycephalosporin 100.0 3.9E-43 1.3E-47 287.9 8.5 155 1-164 117-306 (311)
6 3on7_A Oxidoreductase, iron/as 100.0 1.6E-39 5.4E-44 263.0 10.9 144 1-162 104-276 (280)
7 2rg4_A Uncharacterized protein 95.2 0.6 2.1E-05 35.4 12.9 39 86-124 166-209 (216)
8 3dkq_A PKHD-type hydroxylase S 93.9 0.2 6.8E-06 39.0 7.4 103 13-121 71-194 (243)
9 3itq_A Prolyl 4-hydroxylase, a 88.5 2.9 9.9E-05 31.7 8.7 96 12-122 90-212 (216)
10 2hbt_A EGL nine homolog 1; pro 86.8 2.5 8.5E-05 32.7 7.5 76 43-123 119-214 (247)
11 3s57_A Alpha-ketoglutarate-dep 86.7 3.2 0.00011 31.1 7.9 71 43-119 102-200 (204)
12 3i3q_A Alpha-ketoglutarate-dep 85.5 8.9 0.00031 28.8 9.8 71 43-120 107-201 (211)
13 2jig_A Prolyl-4 hydroxylase; h 84.7 3.8 0.00013 30.8 7.5 98 12-123 77-218 (224)
14 2iuw_A Alkylated repair protei 82.0 4.3 0.00015 31.1 6.9 73 43-121 128-229 (238)
15 2x4k_A 4-oxalocrotonate tautom 56.8 13 0.00044 21.2 3.5 24 9-32 18-41 (63)
16 3abf_A 4-oxalocrotonate tautom 52.3 19 0.00064 20.7 3.7 24 9-32 16-39 (64)
17 3tht_A Alkylated DNA repair pr 51.2 26 0.0009 28.3 5.5 59 42-107 199-264 (345)
18 1otf_A 4-oxalocrotonate tautom 45.1 25 0.00087 19.9 3.5 24 8-31 14-37 (62)
19 2opa_A Probable tautomerase YW 44.8 26 0.0009 19.8 3.5 24 8-31 14-37 (61)
20 2qt7_A Receptor-type tyrosine- 42.2 28 0.00095 22.7 3.5 34 13-46 18-52 (91)
21 2da7_A Zinc finger homeobox pr 39.8 3.9 0.00013 25.5 -0.9 35 2-36 19-53 (71)
22 3kt7_A PKHD-type hydroxylase T 38.8 91 0.0031 27.4 7.2 97 15-123 104-229 (633)
23 3ry0_A Putative tautomerase; o 38.4 37 0.0013 19.7 3.5 24 8-31 14-37 (65)
24 2ww6_A Fibritin, T4 fibritin; 37.5 26 0.00089 17.3 2.1 13 80-92 12-24 (27)
25 4hti_A Receptor-type tyrosine- 37.3 25 0.00084 23.3 2.7 34 13-46 25-59 (99)
26 3m21_A Probable tautomerase HP 36.1 42 0.0014 19.6 3.5 24 8-31 17-40 (67)
27 3m20_A 4-oxalocrotonate tautom 35.8 39 0.0013 19.5 3.3 23 9-31 14-36 (62)
28 3mb2_A 4-oxalocrotonate tautom 35.8 41 0.0014 20.1 3.5 25 8-32 15-39 (72)
29 1gyx_A YDCE, B1461, hypothetic 34.6 44 0.0015 20.2 3.5 25 8-32 15-39 (76)
30 2p17_A Pirin-like protein; GK1 31.9 20 0.00068 28.0 1.8 21 54-74 48-68 (277)
31 2nys_A AGR_C_3712P; SSPB, stri 30.5 78 0.0027 23.1 4.6 63 7-86 13-81 (176)
32 3djh_A Macrophage migration in 28.8 56 0.0019 21.4 3.5 24 8-31 70-93 (114)
33 3ej9_A Alpha-subunit of trans- 26.8 72 0.0025 19.3 3.5 24 8-31 15-38 (76)
34 2qas_A SSPB, hypothetical prot 26.6 1.1E+02 0.0039 21.8 4.8 63 7-86 21-89 (157)
35 3kan_A D-dopachrome tautomeras 25.6 68 0.0023 21.2 3.5 23 9-31 72-94 (117)
36 4dh4_A MIF; trimer, isomerase; 24.8 73 0.0025 20.7 3.5 24 8-31 71-94 (114)
37 2wkb_A Macrophage migration in 24.5 67 0.0023 21.4 3.3 23 10-32 16-38 (125)
38 3fwt_A Macrophage migration in 23.4 78 0.0027 21.5 3.5 24 8-31 92-115 (133)
39 1u9d_A Hypothetical protein VC 22.6 86 0.0029 21.4 3.5 26 8-33 27-52 (122)
40 2xcz_A Possible ATLS1-like lig 21.8 72 0.0025 20.7 3.0 22 10-31 16-37 (115)
41 2opw_A Phyhd1 protein; double- 21.6 1.8E+02 0.006 21.9 5.6 44 88-135 227-275 (291)
42 1uiz_A MIF, macrophage migrati 20.8 98 0.0034 20.0 3.5 24 8-31 71-94 (115)
43 1hfo_A Migration inhibitory fa 20.7 99 0.0034 19.9 3.5 24 8-31 70-93 (113)
44 1uty_A Non-structural protein 20.4 72 0.0025 23.4 2.8 33 76-108 80-116 (187)
45 3b64_A Macrophage migration in 20.2 79 0.0027 20.4 2.9 23 10-32 15-38 (112)
No 1
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=1e-47 Score=316.07 Aligned_cols=165 Identities=30% Similarity=0.602 Sum_probs=147.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccC---CceeeEeeeCCCCCCCCCCccccCCCCCCceEEEecC-C
Q 047232 1 DIIVDHAKKTTELALTLFELISEALGLNANRLKDMDCA---EGLFLLGHYYPACPEPELTMGTDSHADTSFLTVLLQD-R 76 (175)
Q Consensus 1 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~---~~~~l~~~~Yp~~~~~~~~~g~~~HtD~g~lTiL~qd-~ 76 (175)
+++++|+++|.+++.+|++++|++||+++++|.+.+.. ..+.+|++|||||++++..+|+++|||+|+||||+|| +
T Consensus 112 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~ 191 (319)
T 1w9y_A 112 EVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDK 191 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTCCEEEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCCccceeEEEecCCCcccccccccccccCCCceEEEEecCC
Confidence 36899999999999999999999999999999886652 4567999999999988888999999999999999995 7
Q ss_pred CCCeeEeeCCeEEEEeecCCeEEEEecccccc----------------CCCCeEEEEEeeccCCCCCCceEeecCccccC
Q 047232 77 LGGLQVLHENEWVNVTPIHGALVVNLGDMMQA----------------NVGPRVSVACFFRSHFQSEKARLYGPINELLS 140 (175)
Q Consensus 77 ~~GLqV~~~g~W~~V~p~~~~~vVniGd~le~----------------~~~~R~Si~~F~~p~~d~~~~~~i~pl~~~~~ 140 (175)
++||||+++|+|++|+|+||++|||+||+||+ ..++|+|++||++|+. |++|+|+|++++
T Consensus 192 v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~~kS~~HRVv~~~~~~R~Sia~F~~p~~----d~~i~pl~~l~~ 267 (319)
T 1w9y_A 192 VSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSLASFYNPGS----DAVIYPAPALVE 267 (319)
T ss_dssp CCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSSCCEEEEEEEECCT----TCEECCCGGGC-
T ss_pred CCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHhCCeeecccceecCCCCCCceEEEEEecCCC----CCeEeCchhhcC
Confidence 99999999999999999999999999999998 3578999999999999 899999999999
Q ss_pred CC---CCCCCCCccHHHHHHHHHhcCCCCCCC
Q 047232 141 EE---NPPIYKEITVKEYLSHSYSIGLDGTSP 169 (175)
Q Consensus 141 ~~---~~~~y~~~~~~dy~~~~~~~~~~~~~~ 169 (175)
++ +|++|++++++||++.+++..+.++..
T Consensus 268 ~~~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~~ 299 (319)
T 1w9y_A 268 KEAEENKQVYPKFVFDDYMKLYAGLKFQAKEP 299 (319)
T ss_dssp -------CCCCCEEHHHHHHTTTTTTCSSHHH
T ss_pred cccccCccccCcEeHHHHHHHHHhhhcCcchh
Confidence 87 599999999999999999887766543
No 2
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=4.9e-47 Score=316.14 Aligned_cols=163 Identities=29% Similarity=0.481 Sum_probs=151.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcCCCccccccccc---CCceeeEeeeCCCCCCCCCCccccCCCCCCceEEEecCCC
Q 047232 1 DIIVDHAKKTTELALTLFELISEALGLNANRLKDMDC---AEGLFLLGHYYPACPEPELTMGTDSHADTSFLTVLLQDRL 77 (175)
Q Consensus 1 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~---~~~~~l~~~~Yp~~~~~~~~~g~~~HtD~g~lTiL~qd~~ 77 (175)
+++++|+++|.+++.+|+++||++||+++++|.+.+. ...+.+|++|||||++++..+|+++|||+|+||||+||++
T Consensus 167 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~v 246 (356)
T 1gp6_A 167 EATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMV 246 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEECSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEEEEcCC
Confidence 3689999999999999999999999999999998776 4667899999999998888899999999999999999999
Q ss_pred CCeeEeeCCeEEEEeecCCeEEEEecccccc----------------CCCCeEEEEEeeccCCCCCCce-EeecCccccC
Q 047232 78 GGLQVLHENEWVNVTPIHGALVVNLGDMMQA----------------NVGPRVSVACFFRSHFQSEKAR-LYGPINELLS 140 (175)
Q Consensus 78 ~GLqV~~~g~W~~V~p~~~~~vVniGd~le~----------------~~~~R~Si~~F~~p~~d~~~~~-~i~pl~~~~~ 140 (175)
+||||+++|+|++|+|+||++|||+||+||+ ..++|||++||++|+. |+ +|+|++++++
T Consensus 247 ~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~----d~~~i~pl~~~~~ 322 (356)
T 1gp6_A 247 PGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPK----DKIVLKPLPEMVS 322 (356)
T ss_dssp CCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCT----TTCEECCCGGGCC
T ss_pred CCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCC----CCcEEeCChhhcC
Confidence 9999999999999999999999999999998 3578999999999999 78 9999999999
Q ss_pred CCCCCCCCCccHHHHHHHHHhcCCCCC
Q 047232 141 EENPPIYKEITVKEYLSHSYSIGLDGT 167 (175)
Q Consensus 141 ~~~~~~y~~~~~~dy~~~~~~~~~~~~ 167 (175)
+++|++|+++|++||++.+++.+++++
T Consensus 323 ~~~p~~y~~~t~~eyl~~~~~~~~d~~ 349 (356)
T 1gp6_A 323 VESPAKFPPRTFAQHIEHKLFGKEQEE 349 (356)
T ss_dssp SSSCCSSCCEEHHHHHHHHHHHHHHHH
T ss_pred CCCCccCCCccHHHHHHHHHHhccCcc
Confidence 999999999999999999888765443
No 3
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=3.3e-46 Score=306.21 Aligned_cols=158 Identities=25% Similarity=0.378 Sum_probs=144.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCCceeeEeeeCCCCCCCCCCccccCCCCCCceEEEecCCCCCe
Q 047232 1 DIIVDHAKKTTELALTLFELISEALGLNANRLKDMDCAEGLFLLGHYYPACPEPELTMGTDSHADTSFLTVLLQDRLGGL 80 (175)
Q Consensus 1 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~l~~~~Yp~~~~~~~~~g~~~HtD~g~lTiL~qd~~~GL 80 (175)
+++++|+++|.+++.+|++++|++||+++++|.+.+..+.+.+|++|||||+.++..+|+++|||+|+||||+||+++||
T Consensus 129 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GL 208 (312)
T 3oox_A 129 HDVSWLYNSLDGMGGKVLEAIATYLKLERDFFKPTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGL 208 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTHHHHTTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECCTTSCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHhcCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeEcCcCce
Confidence 36899999999999999999999999999999998777778899999999987655599999999999999999999999
Q ss_pred eEe-eCCeEEEEeecCCeEEEEecccccc---------------C-----CCCeEEEEEeeccCCCCCCceEeecCcccc
Q 047232 81 QVL-HENEWVNVTPIHGALVVNLGDMMQA---------------N-----VGPRVSVACFFRSHFQSEKARLYGPINELL 139 (175)
Q Consensus 81 qV~-~~g~W~~V~p~~~~~vVniGd~le~---------------~-----~~~R~Si~~F~~p~~d~~~~~~i~pl~~~~ 139 (175)
||+ ++|+|++|+|+||++|||+||+||+ . ..+|||++||++|+. |++|+|+|+++
T Consensus 209 qV~~~~g~W~~V~p~pg~~vVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~----d~~i~pl~~~v 284 (312)
T 3oox_A 209 EVLDRDGQWLPINPPPGCLVINIGDMLERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFAS----DYEIKTLQNCV 284 (312)
T ss_dssp EEECTTSCEEECCCCSSCEEEEECHHHHHHTTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCT----TCEECCCGGGC
T ss_pred EEECCCCcEEECCCCCCeEEEEhHHHHHHHhCCeecCCCceEeCCCccCCCCCEEEEEEEecCCC----CcEEecCcccc
Confidence 997 4699999999999999999999998 1 356999999999999 89999999999
Q ss_pred CCCCCCCCC-CccHHHHHHHHHhc
Q 047232 140 SEENPPIYK-EITVKEYLSHSYSI 162 (175)
Q Consensus 140 ~~~~~~~y~-~~~~~dy~~~~~~~ 162 (175)
++++|++|+ +++++||++.+++.
T Consensus 285 ~~~~p~~y~~~~t~~eyl~~r~~~ 308 (312)
T 3oox_A 285 TAENPDRYPESITADEFLQQRLRE 308 (312)
T ss_dssp CSSSCCSCSSCEEHHHHHHHHHHH
T ss_pred CCCCcccCCCCeeHHHHHHHHHHH
Confidence 999999999 99999999999875
No 4
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=5.9e-44 Score=295.00 Aligned_cols=156 Identities=17% Similarity=0.189 Sum_probs=145.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCCceeeE--eeeCC------C---CCCCCC-CccccCCCCCCce
Q 047232 2 IIVDHAKKTTELALTLFELISEALGLNANRLKDMDCAEGLFLL--GHYYP------A---CPEPEL-TMGTDSHADTSFL 69 (175)
Q Consensus 2 ~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~l~--~~~Yp------~---~~~~~~-~~g~~~HtD~g~l 69 (175)
++++|+++|.+++..|+++||++||+++++|.+.+..+.+.+| ++||| | |++++. .+|+++|||+|+|
T Consensus 141 ~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~l 220 (331)
T 1odm_A 141 FAEQYYWDVFGLSSALLKGYALALGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLI 220 (331)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeE
Confidence 6899999999999999999999999999999998877778899 99999 7 777776 8999999999999
Q ss_pred EEEecCCCCCeeEe-eCCeEEEEeecCCeEEEEecccccc---------------CCCCeEEEEEeeccCCCCCCceEee
Q 047232 70 TVLLQDRLGGLQVL-HENEWVNVTPIHGALVVNLGDMMQA---------------NVGPRVSVACFFRSHFQSEKARLYG 133 (175)
Q Consensus 70 TiL~qd~~~GLqV~-~~g~W~~V~p~~~~~vVniGd~le~---------------~~~~R~Si~~F~~p~~d~~~~~~i~ 133 (175)
|||+||+++||||+ ++| |++|+|+||++|||+||+||+ +.++|||++||++|+. |++|+
T Consensus 221 TlL~qd~v~GLQV~~~~g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~R~Sia~F~~P~~----d~~i~ 295 (331)
T 1odm_A 221 TVLYQSNVQNLQVETAAG-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKWVNAERQSLPFFVNLGY----DSVID 295 (331)
T ss_dssp EEEEECSSCCEEEEETTE-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEECCCSCEEEEEEEECCCT----TCBCC
T ss_pred EEEeeCCCCCEEEEcCCC-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCCCCCCEEEEEEEEcCCC----CCEEe
Confidence 99999999999999 568 999999999999999999998 4578999999999999 79999
Q ss_pred cCccccCCCCCCCCCCccHHHHHHHHHhcC
Q 047232 134 PINELLSEENPPIYKEITVKEYLSHSYSIG 163 (175)
Q Consensus 134 pl~~~~~~~~~~~y~~~~~~dy~~~~~~~~ 163 (175)
|+++++++++ ++|++++++||++.+++..
T Consensus 296 pl~~~~~~~~-~~y~~~t~~e~l~~~~~~~ 324 (331)
T 1odm_A 296 PFDPREPNGK-SDREPLSYGDYLQNGLVSL 324 (331)
T ss_dssp CCCTTSTTCC-CSSCCCBHHHHHHHHHHHH
T ss_pred CCCccccccc-cCCCCccHHHHHHHHHHHH
Confidence 9999998887 8999999999999988764
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=3.9e-43 Score=287.89 Aligned_cols=155 Identities=17% Similarity=0.184 Sum_probs=137.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcCC----CcccccccccCCceeeEeeeCCCCCCCC--C--CccccCCCCCCceEEE
Q 047232 1 DIIVDHAKKTTELALTLFELISEALGL----NANRLKDMDCAEGLFLLGHYYPACPEPE--L--TMGTDSHADTSFLTVL 72 (175)
Q Consensus 1 ~~~~~y~~~~~~l~~~ll~~la~~Lgl----~~~~~~~~~~~~~~~l~~~~Yp~~~~~~--~--~~g~~~HtD~g~lTiL 72 (175)
+++++|+++|.+++.+|+++||++||+ ++++|.+. .+.+|++|||||++++ . .+|+++|||+|+||||
T Consensus 117 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~f~~~----~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL 192 (311)
T 1dcs_A 117 RIWTQYFDRQYTASRAVAREVLRATGTEPDGGVEAFLDC----EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLI 192 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTCHHHHHSC----CCEEEEEEECC-----------CCEEEEEECSSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCcHhHHhhc----chhhheecCCCCCcccccCccccccccccCCCeEEEE
Confidence 368999999999999999999999999 88888765 5679999999998763 3 6789999999999999
Q ss_pred ecC-CCCC---eeEeeCCeEEEEeecCCeEEEEecccccc----------------C-----CCCeEEEEEeeccCCCCC
Q 047232 73 LQD-RLGG---LQVLHENEWVNVTPIHGALVVNLGDMMQA----------------N-----VGPRVSVACFFRSHFQSE 127 (175)
Q Consensus 73 ~qd-~~~G---LqV~~~g~W~~V~p~~~~~vVniGd~le~----------------~-----~~~R~Si~~F~~p~~d~~ 127 (175)
+|| .++| |||+++|+|++|+|+||++|||+||+||+ . .++|||++||++|+.
T Consensus 193 ~qd~~v~G~~~LqV~~~g~W~~V~p~pg~lvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~--- 269 (311)
T 1dcs_A 193 QQTPCANGFVSLQAEVGGAFTDLPYRPDAVLVFCGAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNA--- 269 (311)
T ss_dssp EEECCTTCCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCT---
T ss_pred ecCCCCCCceeEEEEeCCEEEeCcCCCCeEEEEHHHHHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCCC---
Confidence 998 8999 99999999999999999999999999998 2 568999999999999
Q ss_pred CceEeecCccccCCCCCCCC--CCccHHHHHHHHHhcCC
Q 047232 128 KARLYGPINELLSEENPPIY--KEITVKEYLSHSYSIGL 164 (175)
Q Consensus 128 ~~~~i~pl~~~~~~~~~~~y--~~~~~~dy~~~~~~~~~ 164 (175)
|++|+ +|+++++++|++| +++|++||++.++++.+
T Consensus 270 -d~~i~-l~~~~~~~~p~~y~~~~~t~~ey~~~~~~~~~ 306 (311)
T 1dcs_A 270 -DFTFS-VPLARECGFDVSLDGETATFQDWIGGNYVNIR 306 (311)
T ss_dssp -TCEEE-HHHHHHTTCCCCCCSSEEEHHHHHCSSCCCEE
T ss_pred -CcEEe-CCcccCCCCccccCCCCccHHHHHHHHHHHHh
Confidence 79999 9999998899999 99999999998877655
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=1.6e-39 Score=262.97 Aligned_cols=144 Identities=26% Similarity=0.358 Sum_probs=124.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcCCCc--cc---ccccccCCc-eeeEeeeCCCCCCCC--CCccccCCCCCCceEEE
Q 047232 1 DIIVDHAKKTTELALTLFELISEALGLNA--NR---LKDMDCAEG-LFLLGHYYPACPEPE--LTMGTDSHADTSFLTVL 72 (175)
Q Consensus 1 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~--~~---~~~~~~~~~-~~l~~~~Yp~~~~~~--~~~g~~~HtD~g~lTiL 72 (175)
+++++|+++|.+++.+|++++|++||++. ++ |.+++..+. +.+|++|||||+.++ ..+|+++|||+|+||||
T Consensus 104 ~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL 183 (280)
T 3on7_A 104 ANILAYYEKANTLASELLEWIETYSPDEIKAKFSIPLPEMIANSHKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVL 183 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTCSSCHHHHHTTCSSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhHHHHHHhcCCccceEEEEECCCCCCccccCcccccCCCCCCeEEEE
Confidence 36899999999999999999999999873 33 334444443 789999999998654 47899999999999999
Q ss_pred ecCCCCCeeEee-CCeEEEEeecCCeEEEEecccccc---------------C-----CCCeEEEEEeeccCCCCCCceE
Q 047232 73 LQDRLGGLQVLH-ENEWVNVTPIHGALVVNLGDMMQA---------------N-----VGPRVSVACFFRSHFQSEKARL 131 (175)
Q Consensus 73 ~qd~~~GLqV~~-~g~W~~V~p~~~~~vVniGd~le~---------------~-----~~~R~Si~~F~~p~~d~~~~~~ 131 (175)
+||+++||||++ +|+|++|+|+||++|||+||+||+ . ..+|||++||++|+. |++
T Consensus 184 ~qd~~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~Tng~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~~----d~~ 259 (280)
T 3on7_A 184 PTANEPGLQVKAKDGSWLDVPSDFGNIIINIGDMLQEASDGYFPSTSHRVINPEGTDKTKSRISLPLFLHPHP----SVV 259 (280)
T ss_dssp ECCSCCCEEEECTTSCEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEEECCTTCCTTSCEEECCEEECCCT----TCB
T ss_pred EecCCCCeEEEcCCCCEEECcCCCCEEEEEcChHHHHHhCCcccCCCceEeCCCCCCCCCCeEEEEEEEcCCC----CCE
Confidence 999999999995 699999999999999999999998 1 358999999999999 777
Q ss_pred eecCccccCCCCCCCCCCccHHHHHHHHHhc
Q 047232 132 YGPINELLSEENPPIYKEITVKEYLSHSYSI 162 (175)
Q Consensus 132 i~pl~~~~~~~~~~~y~~~~~~dy~~~~~~~ 162 (175)
|+| ++|++||++.+++.
T Consensus 260 i~p--------------~ita~~~l~~rl~~ 276 (280)
T 3on7_A 260 LSE--------------RYTADSYLMERLRE 276 (280)
T ss_dssp CSS--------------SCBHHHHHHHHHHH
T ss_pred ECC--------------CccHHHHHHHHHHH
Confidence 764 58999999999876
No 7
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=95.24 E-value=0.6 Score=35.41 Aligned_cols=39 Identities=15% Similarity=0.137 Sum_probs=30.1
Q ss_pred CeEEEEeecCCeEEEEecccccc-----CCCCeEEEEEeeccCC
Q 047232 86 NEWVNVTPIHGALVVNLGDMMQA-----NVGPRVSVACFFRSHF 124 (175)
Q Consensus 86 g~W~~V~p~~~~~vVniGd~le~-----~~~~R~Si~~F~~p~~ 124 (175)
..+..|.|.+|.+|+.-..+... +.++|+||+|.+.+..
T Consensus 166 ~~~~~i~P~~G~lvlFpS~l~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESWLRHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp CSEEEECCCTTEEEEEETTSCEEECCCCSSSCEEEEEEEEEC--
T ss_pred CCeeEecCCCCeEEEECCCCEEeccCCCCCCCEEEEEEEeecCC
Confidence 36779999999999999884443 4568999999887764
No 8
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=93.93 E-value=0.2 Score=39.00 Aligned_cols=103 Identities=17% Similarity=0.109 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHcCCCcccccccccCCceeeEeeeCCCCCCCCCCccccCCCCCC-----------ceEEEec--C----
Q 047232 13 LALTLFELISEALGLNANRLKDMDCAEGLFLLGHYYPACPEPELTMGTDSHADTS-----------FLTVLLQ--D---- 75 (175)
Q Consensus 13 l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~l~~~~Yp~~~~~~~~~g~~~HtD~g-----------~lTiL~q--d---- 75 (175)
++..|.+.|...|+....++..........+++++|.+-. -..+|.|.. .+|+++. |
T Consensus 71 ~~~~l~~~i~~~l~~~~~f~~~~L~~~~e~~~~~rY~~G~------~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~ 144 (243)
T 3dkq_A 71 VAVALGQQIMDRLLAHPQFVSAALPLQFYPPLFNRYQGGE------TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENY 144 (243)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHCEEEEEEEEEEEECTTC------EEEEECBCSEEEETTEEEECCEEEEEECSCGGGE
T ss_pred HHHHHHHHHHHHHccCcchhhcccccccccceEEEECCCC------eeccCCCCCCCCCCCccccceEEEEEEeCCCCCC
Confidence 5566666666677665433221111112235677786631 145666652 4555544 3
Q ss_pred CCCCeeEeeCCeEEEEeecCCeEEEEecccccc----CCCCeEEEEEeec
Q 047232 76 RLGGLQVLHENEWVNVTPIHGALVVNLGDMMQA----NVGPRVSVACFFR 121 (175)
Q Consensus 76 ~~~GLqV~~~g~W~~V~p~~~~~vVniGd~le~----~~~~R~Si~~F~~ 121 (175)
..|.|.+.....=..|+|..|.+++.-.+++.. ....|++++.+++
T Consensus 145 ~GGetvf~~~~~~~~V~P~~G~~v~F~s~~lH~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 145 QGGELVIQDTYGQQSIKLSAGSLVLYPSSSLHQVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp EECCEEEEETTEEEEECCCTTCEEEEETTSEEEECCEEEECEEEEEEEEE
T ss_pred CCceEEEeeCCCcEEEecCCCEEEEECCCCeEcCccccccCEEEEEEehh
Confidence 124466665544578999999999998877655 3468999999986
No 9
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=88.54 E-value=2.9 Score=31.68 Aligned_cols=96 Identities=20% Similarity=0.155 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHcCCCcccccccccCCceeeEeeeCCCCCCCCCCccccCCCCCC-----------ceEEEec--CC-C
Q 047232 12 ELALTLFELISEALGLNANRLKDMDCAEGLFLLGHYYPACPEPELTMGTDSHADTS-----------FLTVLLQ--DR-L 77 (175)
Q Consensus 12 ~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~l~~~~Yp~~~~~~~~~g~~~HtD~g-----------~lTiL~q--d~-~ 77 (175)
.+...|.+.++..+|++.+..+ .+++.+|.+... ..+|.|.. .+|+++- |. .
T Consensus 90 ~~v~~i~~Ri~~~~gl~~~~~E--------~lqv~~Y~~G~~------y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~ 155 (216)
T 3itq_A 90 ELTAKIEKRISSIMNVPASHGE--------GLHILNYEVDQQ------YKAHYDYFAEHSRSAANNRISTLVMYLNDVEE 155 (216)
T ss_dssp HHHHHHHHHHHHHHTSCGGGBC--------CCEEEEECBTCC------EEEECSSCCTTSGGGGGCEEEEEEEECSCCSE
T ss_pred HHHHHHHHHHHHhcCceecccc--------ceeEEEeCCCCc------cccccCCCcCCCcccCCceEEEEEEecccCCc
Confidence 4556677777777888643211 244556654211 45666653 3677655 22 2
Q ss_pred CCeeEeeCCeEEEEeecCCeEEEEec---------ccccc----CCCCeEEEEEeecc
Q 047232 78 GGLQVLHENEWVNVTPIHGALVVNLG---------DMMQA----NVGPRVSVACFFRS 122 (175)
Q Consensus 78 ~GLqV~~~g~W~~V~p~~~~~vVniG---------d~le~----~~~~R~Si~~F~~p 122 (175)
+|==+... .-+.|.|..|.+++.-. ..+.. ....|+++..+++-
T Consensus 156 GGeT~Fp~-~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~~ 212 (216)
T 3itq_A 156 GGETFFPK-LNLSVHPRKGMAVYFEYFYQDQSLNELTLHGGAPVTKGEKWIATQWVRR 212 (216)
T ss_dssp ECCEEETT-TTEEECCCTTCEEEEECCCSSHHHHHTTCEEECCEEESCEEEEEEEEES
T ss_pred CceeEecC-CCCEEecCCCeEEEEeccCCCCCCCCccccccceeccccEEEEEeeEec
Confidence 33222222 23789999999888765 23332 34578988887753
No 10
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=86.82 E-value=2.5 Score=32.66 Aligned_cols=76 Identities=17% Similarity=0.315 Sum_probs=50.7
Q ss_pred eEeeeCCCCCCCCCCccccCCCCCC-----ceEEEec--C------CCCCeeEeeCC--eEEEEeecCCeEEEEeccc--
Q 047232 43 LLGHYYPACPEPELTMGTDSHADTS-----FLTVLLQ--D------RLGGLQVLHEN--EWVNVTPIHGALVVNLGDM-- 105 (175)
Q Consensus 43 l~~~~Yp~~~~~~~~~g~~~HtD~g-----~lTiL~q--d------~~~GLqV~~~g--~W~~V~p~~~~~vVniGd~-- 105 (175)
+.+.+|++. .-....|.|.. .+|+++. + ..|-|++...+ ....|.|..|.+|+.-.+.
T Consensus 119 ~~~~~Y~~~-----G~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~~~~ 193 (247)
T 2hbt_A 119 AMVACYPGN-----GTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRN 193 (247)
T ss_dssp EEEEEECSS-----SCCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECSTTC
T ss_pred EEEEEecCC-----CCcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecCCCc
Confidence 445677751 12256677762 6787765 2 13446777654 6789999999999998763
Q ss_pred ccc---CCCCeEEEEEeeccC
Q 047232 106 MQA---NVGPRVSVACFFRSH 123 (175)
Q Consensus 106 le~---~~~~R~Si~~F~~p~ 123 (175)
+.. ....|+||+.++.-+
T Consensus 194 ~H~V~p~~~~R~sit~W~~~~ 214 (247)
T 2hbt_A 194 PHEVQPAYATRYAITVWYFDA 214 (247)
T ss_dssp CEEECCBSSCEEEEEEEEEEH
T ss_pred eeeeccCCCEEEEEEEEEcCC
Confidence 322 567999999877643
No 11
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=86.71 E-value=3.2 Score=31.05 Aligned_cols=71 Identities=18% Similarity=0.175 Sum_probs=44.6
Q ss_pred eEeeeCCCCCCCCCCccccCCCCCC--------ceEEEecCCCCCeeEeeC----------CeEEEEeecCCeEEEEecc
Q 047232 43 LLGHYYPACPEPELTMGTDSHADTS--------FLTVLLQDRLGGLQVLHE----------NEWVNVTPIHGALVVNLGD 104 (175)
Q Consensus 43 l~~~~Yp~~~~~~~~~g~~~HtD~g--------~lTiL~qd~~~GLqV~~~----------g~W~~V~p~~~~~vVniGd 104 (175)
..+|+|.+.. -++++|.|-. ..++=+. ...-+.+... +..+.+...+|+++|.-|+
T Consensus 102 ~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IasvSLG-~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~g~ 175 (204)
T 3s57_A 102 VLINRYKDGS-----DHICEHRDDERELAPGSPIASVSFG-ASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNHP 175 (204)
T ss_dssp EEEEEESSTT-----CCEEEECCCCTTBCTTCCEEEEEEE-SCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEETT
T ss_pred eEEEEECCCC-----CcccceecChhhccCCCcEEEEECC-CceEEEEEEcCCCccccccCCceEEEECCCCCEEEECch
Confidence 4578997732 2578888862 1222222 1122334321 2578899999999999998
Q ss_pred cccc----------CCCCeEEEEEe
Q 047232 105 MMQA----------NVGPRVSVACF 119 (175)
Q Consensus 105 ~le~----------~~~~R~Si~~F 119 (175)
+=.. ....|+|+.|-
T Consensus 176 ~q~~w~H~Ip~~~~~~~~RislTFR 200 (204)
T 3s57_A 176 TNTHWYHSLPVRKKVLAPRVNLTFR 200 (204)
T ss_dssp HHHHEEEEECCCTTCCSCEEEEEEE
T ss_pred hhheeEeeccccCCCCCCEEEEEee
Confidence 6543 23679999985
No 12
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=85.48 E-value=8.9 Score=28.84 Aligned_cols=71 Identities=18% Similarity=0.093 Sum_probs=45.2
Q ss_pred eEeeeCCCCCCCCCCccccCCCCC-----C--ceEEEecCCCCCeeEee---CCeEEEEeecCCeEEEEecccccc----
Q 047232 43 LLGHYYPACPEPELTMGTDSHADT-----S--FLTVLLQDRLGGLQVLH---ENEWVNVTPIHGALVVNLGDMMQA---- 108 (175)
Q Consensus 43 l~~~~Yp~~~~~~~~~g~~~HtD~-----g--~lTiL~qd~~~GLqV~~---~g~W~~V~p~~~~~vVniGd~le~---- 108 (175)
..+|+|.+. . ++++|.|- + .+|+-+. ...-+.+.. .+....+...+|+++|.-|++=..
T Consensus 107 ~LvN~Y~~G-----~-~i~~H~D~~e~~~~~pI~svSLG-~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r~~~H~I 179 (211)
T 3i3q_A 107 CLINRYAPG-----A-KLSLHQDKDEPDLRAPIVSVSLG-LPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGI 179 (211)
T ss_dssp EEEEEECTT-----C-CEEEECCCCCSCTTSCEEEEEEE-SCEEEEECCSSTTSCCEEEEECTTCEEEECGGGTTCCEEE
T ss_pred EEEEEEcCC-----C-CcccccCCCccccCCCEEEEECC-CCeEEEEecccCCCceEEEECCCCCEEEECchHHceEecc
Confidence 457999763 3 78999993 2 2232222 112234432 267889999999999999987443
Q ss_pred -CC---------CCeEEEEEee
Q 047232 109 -NV---------GPRVSVACFF 120 (175)
Q Consensus 109 -~~---------~~R~Si~~F~ 120 (175)
.. ..|+|+.|-.
T Consensus 180 ~~~~~~~~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 180 QPLKAGFHPLTIDCRYNLTFRQ 201 (211)
T ss_dssp CCCCCCCBTTTBTCEEEEEEEC
T ss_pred CcccCCcCCCCCCCEEEEEeee
Confidence 11 2599999864
No 13
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=84.73 E-value=3.8 Score=30.76 Aligned_cols=98 Identities=14% Similarity=0.156 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHcCCCcccccccccCCceeeEeeeCCCCCCCCCCccccCCCCC--------------CceEEEec--C
Q 047232 12 ELALTLFELISEALGLNANRLKDMDCAEGLFLLGHYYPACPEPELTMGTDSHADT--------------SFLTVLLQ--D 75 (175)
Q Consensus 12 ~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~l~~~~Yp~~~~~~~~~g~~~HtD~--------------g~lTiL~q--d 75 (175)
.+...|.+.|+..+|++....+ .+++.+|.+-. ...+|.|. ..+|+|+- |
T Consensus 77 ~~~~~i~~ri~~~~gl~~~~~e--------~~qv~rY~~G~------~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd 142 (224)
T 2jig_A 77 SVISKIEKRVAQVTMIPLENHE--------GLQVLHYHDGQ------KYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTT 142 (224)
T ss_dssp HHHHHHHHHHHHHHTCCGGGBC--------CCEEEEEETTC------CEEEECCSSCCTTSSSCCCCSCEEEEEEEECSC
T ss_pred HHHHHHHHHHHHHhCCCccccc--------ceEEEecCCCc------cccCcccCCCCccccccccCCCeEEEEEEEecC
Confidence 3556677777777888743222 24455565421 13455553 24777754 3
Q ss_pred C-CCC-eeEeeCC-------------eEEEEeecCCeEEEEec---------ccccc----CCCCeEEEEEeeccC
Q 047232 76 R-LGG-LQVLHEN-------------EWVNVTPIHGALVVNLG---------DMMQA----NVGPRVSVACFFRSH 123 (175)
Q Consensus 76 ~-~~G-LqV~~~g-------------~W~~V~p~~~~~vVniG---------d~le~----~~~~R~Si~~F~~p~ 123 (175)
. .+| +.+-..+ .-+.|.|..|.+|+.-- .++.. ....||++..+++-.
T Consensus 143 ~~~GGeT~Fp~~~~~~~~~~~~~c~~~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~~ 218 (224)
T 2jig_A 143 VEEGGETVLPNAEQKVTGDGWSECAKRGLAVKPIKGDALMFYSLKPDGSNDPASLHGSCPTLKGDKWSATKWIHVA 218 (224)
T ss_dssp CSEECCEEETTSSSCCCSTTSCTTGGGSEEECCCTTCEEEEESBCTTSCBCGGGCEEECCEEESEEEEEEEEEESS
T ss_pred CCCCCceeCCCcccccccccccccccCceEEecccCcEEEEEeeCCCCCCCCCCcccCCccccceEEEEEEeEEcC
Confidence 2 233 4432211 24899999999988753 22222 345799988887644
No 14
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=82.01 E-value=4.3 Score=31.07 Aligned_cols=73 Identities=21% Similarity=0.257 Sum_probs=46.3
Q ss_pred eEeeeCCCCCCCCCCccccCCCCCC--------ceEEEecCCCCCeeEeeC-----------CeEEEEeecCCeEEEEec
Q 047232 43 LLGHYYPACPEPELTMGTDSHADTS--------FLTVLLQDRLGGLQVLHE-----------NEWVNVTPIHGALVVNLG 103 (175)
Q Consensus 43 l~~~~Yp~~~~~~~~~g~~~HtD~g--------~lTiL~qd~~~GLqV~~~-----------g~W~~V~p~~~~~vVniG 103 (175)
..+|+|++- .-++++|.|-. +.|+=+. ...=+.+... +..+.+...+|+++|.-|
T Consensus 128 ~LvN~Y~~G-----~d~i~~H~D~~~~~~~~~~IaslSLG-~~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~G 201 (238)
T 2iuw_A 128 LLCNLYRNE-----KDSVDWHSDDEPSLGRCPIIASLSFG-ATRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIMEG 201 (238)
T ss_dssp EEEEEECST-----TCCEEEECCCCGGGCSSCCEEEEEEE-SCEEEEEEECCC--------CCCEEEEEECTTCEEEEEE
T ss_pred EEEEEECCC-----CCceeCCcCChhhcCCCCcEEEEECC-CCEEEEEeccCCccccCcccCCceEEEEcCCCCEEEECh
Confidence 457889763 22588888852 2222222 1112333321 368899999999999999
Q ss_pred ccccc----------CCCCeEEEEEeec
Q 047232 104 DMMQA----------NVGPRVSVACFFR 121 (175)
Q Consensus 104 d~le~----------~~~~R~Si~~F~~ 121 (175)
++=.. ....|+|+.|-..
T Consensus 202 ~~r~~w~H~I~~~~~~~~~RIsLTfR~v 229 (238)
T 2iuw_A 202 ATQADWQHRVPKEYHSREPRVNLTFRTV 229 (238)
T ss_dssp THHHHEEEEECCCSSCCCCEEEEEEECC
T ss_pred hhhCccEecCCCcCCCCCCEEEEEeeec
Confidence 86322 2578999999754
No 15
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=56.84 E-value=13 Score=21.19 Aligned_cols=24 Identities=13% Similarity=0.272 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHHHcCCCcccc
Q 047232 9 KTTELALTLFELISEALGLNANRL 32 (175)
Q Consensus 9 ~~~~l~~~ll~~la~~Lgl~~~~~ 32 (175)
+-.+++..|.+++++.||.+++++
T Consensus 18 ~k~~l~~~l~~~l~~~lg~p~~~v 41 (63)
T 2x4k_A 18 QLKNLVSEVTDAVEKTTGANRQAI 41 (63)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred HHHHHHHHHHHHHHHHhCcCcccE
Confidence 457899999999999999998754
No 16
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=52.34 E-value=19 Score=20.74 Aligned_cols=24 Identities=33% Similarity=0.349 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHcCCCcccc
Q 047232 9 KTTELALTLFELISEALGLNANRL 32 (175)
Q Consensus 9 ~~~~l~~~ll~~la~~Lgl~~~~~ 32 (175)
+-.+++..|.+++++.||.+++++
T Consensus 16 qk~~l~~~lt~~l~~~lg~~~~~v 39 (64)
T 3abf_A 16 KKRELVRRLTEMASRLLGEPYEEV 39 (64)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGE
T ss_pred HHHHHHHHHHHHHHHHhCCCcccE
Confidence 456899999999999999998753
No 17
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=51.25 E-value=26 Score=28.31 Aligned_cols=59 Identities=20% Similarity=0.166 Sum_probs=37.6
Q ss_pred eeEeeeCCCCCCCCCCccccCCCCCC------ceEEEecCCCCCeeEee-CCeEEEEeecCCeEEEEeccccc
Q 047232 42 FLLGHYYPACPEPELTMGTDSHADTS------FLTVLLQDRLGGLQVLH-ENEWVNVTPIHGALVVNLGDMMQ 107 (175)
Q Consensus 42 ~l~~~~Yp~~~~~~~~~g~~~HtD~g------~lTiL~qd~~~GLqV~~-~g~W~~V~p~~~~~vVniGd~le 107 (175)
...+|+|.+- -++++|.|-. ..|+=+. ...-+.+.. +|.++.+...+|+++|.-|++=.
T Consensus 199 ~~lvN~Y~~G------~~I~~H~D~~~~~~~~I~slSLG-~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~ 264 (345)
T 3tht_A 199 QMTINQYEPG------QGIPAHIDTHSAFEDEIVSLSLG-SEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRY 264 (345)
T ss_dssp EEEEEEECTT------CCEEEECCCTTTBCSCEEEEEES-SCEEEEEECTTSCEEEEEECTTEEEEECTHHHH
T ss_pred EEEEEEecCC------CCEeeccCCchhcCCeEEEEECC-CceeEEEccCCCceEEEEcCCCcEEEEChHHhh
Confidence 3557889762 2788999984 2222222 112234443 36788999999999999887543
No 18
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=45.10 E-value=25 Score=19.93 Aligned_cols=24 Identities=17% Similarity=0.238 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccc
Q 047232 8 KKTTELALTLFELISEALGLNANR 31 (175)
Q Consensus 8 ~~~~~l~~~ll~~la~~Lgl~~~~ 31 (175)
++-.+++..|.+++.+.||++++.
T Consensus 14 e~k~~l~~~i~~~l~~~lg~p~~~ 37 (62)
T 1otf_A 14 EQKETLIRQVSEAMANSLDAPLER 37 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHHHHHHHHHHHhCcCccc
Confidence 345789999999999999999864
No 19
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=44.83 E-value=26 Score=19.83 Aligned_cols=24 Identities=17% Similarity=0.320 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccc
Q 047232 8 KKTTELALTLFELISEALGLNANR 31 (175)
Q Consensus 8 ~~~~~l~~~ll~~la~~Lgl~~~~ 31 (175)
++-.+++..|.+++.+.||++++.
T Consensus 14 eqk~~l~~~i~~~l~~~lg~~~~~ 37 (61)
T 2opa_A 14 EQKRNLVEKVTEAVKETTGASEEK 37 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHHhCcCcCe
Confidence 345789999999999999999864
No 20
>2qt7_A Receptor-type tyrosine-protein phosphatase-like N; IA-2, ICA-512, protein-tyrosine phosphatase, transmembrane protein, diabetes, autoimmunity; 1.30A {Homo sapiens} PDB: 3n01_A 3np5_A 3ng8_A 3n4w_A
Probab=42.25 E-value=28 Score=22.68 Aligned_cols=34 Identities=12% Similarity=0.286 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHcCCCcccccccc-cCCceeeEee
Q 047232 13 LALTLFELISEALGLNANRLKDMD-CAEGLFLLGH 46 (175)
Q Consensus 13 l~~~ll~~la~~Lgl~~~~~~~~~-~~~~~~l~~~ 46 (175)
=+.+|++.+|+.|+++.++|.+.. ..+...+|+.
T Consensus 18 eG~~l~~~la~ll~l~~~~Ft~i~V~g~aVTFrV~ 52 (91)
T 2qt7_A 18 AGVKLLEILAEHVHMSSGSFINISVVGPALTFRIR 52 (91)
T ss_dssp HHHHHHHHHHHHHTSCGGGEEEEEEETTEEEEEEC
T ss_pred HHHHHHHHHHHHhcCCccceeeeEeecceEEEEec
Confidence 367899999999999999998853 3333455553
No 21
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.84 E-value=3.9 Score=25.51 Aligned_cols=35 Identities=20% Similarity=0.077 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccc
Q 047232 2 IIVDHAKKTTELALTLFELISEALGLNANRLKDMD 36 (175)
Q Consensus 2 ~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~ 36 (175)
+++.|+..-.+-...-+..||+.+||+.+....+|
T Consensus 19 ~Lk~yF~~n~~Ps~eei~~LA~~lgL~~~VVrVWF 53 (71)
T 2da7_A 19 VLKAYYAMNMEPNSDELLKISIAVGLPQEFVKEWF 53 (71)
T ss_dssp HHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHhCCCCCHHHHHHHHHHhCCCHHHHHHHH
Confidence 46778887777788888999999999998765544
No 22
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=38.85 E-value=91 Score=27.41 Aligned_cols=97 Identities=12% Similarity=0.110 Sum_probs=57.0
Q ss_pred HHHHHHHHHHcCCCcccccccccCCceeeEeeeCCCCCCCCCCccccCCCCC-C--ceEEEec----C------CCCCee
Q 047232 15 LTLFELISEALGLNANRLKDMDCAEGLFLLGHYYPACPEPELTMGTDSHADT-S--FLTVLLQ----D------RLGGLQ 81 (175)
Q Consensus 15 ~~ll~~la~~Lgl~~~~~~~~~~~~~~~l~~~~Yp~~~~~~~~~g~~~HtD~-g--~lTiL~q----d------~~~GLq 81 (175)
..++..+++..|++. +.. ....+.++.|++. --+..|.|. + .+|+++- | ..|-|+
T Consensus 104 ~~Fr~~Ls~iTGi~~--Lsg----~~~D~~~a~Y~~G------~fL~~H~D~~~~RrvS~VLYLN~pd~~W~~e~GGeL~ 171 (633)
T 3kt7_A 104 KQYRDFFGYVTKAGK--LSG----SKTDMSINTYTKG------CHLLTHDDVIGSRRISFILYLPDPDRKWKSHYGGGLR 171 (633)
T ss_dssp HHHHHHHHHHHTCCC--CCS----SCCCEEEEEECTT------CEEEEECCCCTTEEEEEEEECSCTTSCCCGGGBCCEE
T ss_pred HHHHHHHHHHhCCcc--cCC----CceeEEEEEeCCC------CeeeecCCCCCCeEEEEEEEcCCCCCCCCccCCceEE
Confidence 456667777777642 110 0011345566552 125678884 2 3566553 1 234488
Q ss_pred EeeC--------CeEEEEeecCCeEEEEecc---cccc-----CCCCeEEEEEeeccC
Q 047232 82 VLHE--------NEWVNVTPIHGALVVNLGD---MMQA-----NVGPRVSVACFFRSH 123 (175)
Q Consensus 82 V~~~--------g~W~~V~p~~~~~vVniGd---~le~-----~~~~R~Si~~F~~p~ 123 (175)
++.. .....|.|..|.+|+..-. ...- ..+.|+||+-+++-+
T Consensus 172 Lyd~d~~~~P~~d~~~~I~P~fNrLV~F~vsp~~S~H~V~eV~~~~~RlSItGWF~~p 229 (633)
T 3kt7_A 172 LFPSILPNVPHSDPSAKLVPQFNQIAFFKVLPGFSFHDXEEVKVDKHRLSIQGWYHIP 229 (633)
T ss_dssp ECCEEETTEECSSCSEEECCCTTEEEEEECCTTTCCEEECCBCSSCCEEEEEEEEECC
T ss_pred EecCCCcCCCCCCceEEEecCCCeEEEEEcCCCCCcCCCCccCCCCCEEEEEEEeccC
Confidence 7743 2477899999999998743 3331 477899998777633
No 23
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=38.35 E-value=37 Score=19.70 Aligned_cols=24 Identities=21% Similarity=0.254 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccc
Q 047232 8 KKTTELALTLFELISEALGLNANR 31 (175)
Q Consensus 8 ~~~~~l~~~ll~~la~~Lgl~~~~ 31 (175)
++-.+|+..|.+++.+.||++++.
T Consensus 14 eqk~~L~~~it~~~~~~lg~p~~~ 37 (65)
T 3ry0_A 14 QEVAALGEALTAAAHETLGTPVEA 37 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHHhCcCccc
Confidence 356789999999999999999864
No 24
>2ww6_A Fibritin, T4 fibritin; D-amino acids, chaperone, viral protein; HET: DPN PG4; 0.98A {Enterobacteria phage T4} PDB: 1rfo_A 1u0p_A 2kbl_A 2ww7_A*
Probab=37.53 E-value=26 Score=17.33 Aligned_cols=13 Identities=31% Similarity=0.434 Sum_probs=10.1
Q ss_pred eeEeeCCeEEEEe
Q 047232 80 LQVLHENEWVNVT 92 (175)
Q Consensus 80 LqV~~~g~W~~V~ 92 (175)
..|+++|+|+...
T Consensus 12 ~Yvr~dg~WV~l~ 24 (27)
T 2ww6_A 12 AYVRKFGEWVLLS 24 (27)
T ss_dssp EEEEETTEEEEGG
T ss_pred eeEEEcCeEEEcc
Confidence 4688899999753
No 25
>4hti_A Receptor-type tyrosine-protein phosphatase N2; phogrin, IA-2BETA, protein-tyrosine phosphatase, transmembra protein, diabetes, autoimmunity; 1.95A {Homo sapiens} PDB: 4htj_A
Probab=37.30 E-value=25 Score=23.29 Aligned_cols=34 Identities=12% Similarity=0.132 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHcCCCcccccccc-cCCceeeEee
Q 047232 13 LALTLFELISEALGLNANRLKDMD-CAEGLFLLGH 46 (175)
Q Consensus 13 l~~~ll~~la~~Lgl~~~~~~~~~-~~~~~~l~~~ 46 (175)
=+.+|++.+|+.|+++.++|.+.. ..+...+|+.
T Consensus 25 ~G~~l~~~la~~l~l~~~~F~~isV~g~aVTFrV~ 59 (99)
T 4hti_A 25 EGRRLVEDVARLLQVPSSAFADVEVLGPAVTFKVS 59 (99)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEEEETTEEEEEEC
T ss_pred HHHHHHHHHHHHhCCchhheeeeeecCceEEEEec
Confidence 367899999999999999998752 2333445554
No 26
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=36.05 E-value=42 Score=19.63 Aligned_cols=24 Identities=17% Similarity=0.245 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccc
Q 047232 8 KKTTELALTLFELISEALGLNANR 31 (175)
Q Consensus 8 ~~~~~l~~~ll~~la~~Lgl~~~~ 31 (175)
++-.+++..|.+++++.||++++.
T Consensus 17 eqK~~l~~~lt~~l~~~lg~p~~~ 40 (67)
T 3m21_A 17 EQKQQLIEGVSDLMVKVLNKNKAS 40 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHHHCcCccc
Confidence 356789999999999999999754
No 27
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=35.79 E-value=39 Score=19.49 Aligned_cols=23 Identities=22% Similarity=0.349 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHcCCCccc
Q 047232 9 KTTELALTLFELISEALGLNANR 31 (175)
Q Consensus 9 ~~~~l~~~ll~~la~~Lgl~~~~ 31 (175)
+-.+|+..|.+++++.||++++.
T Consensus 14 qK~~L~~~it~~~~~~lg~~~~~ 36 (62)
T 3m20_A 14 KKREFVERLTSVAAEIYGMDRSA 36 (62)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTS
T ss_pred HHHHHHHHHHHHHHHHhCcCcce
Confidence 45789999999999999999754
No 28
>3mb2_A 4-oxalocrotonate tautomerase family enzyme - ALPH; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=35.79 E-value=41 Score=20.05 Aligned_cols=25 Identities=20% Similarity=0.244 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcccc
Q 047232 8 KKTTELALTLFELISEALGLNANRL 32 (175)
Q Consensus 8 ~~~~~l~~~ll~~la~~Lgl~~~~~ 32 (175)
++-.+++..|.+++++.||++++..
T Consensus 15 eqK~~L~~~it~~l~~~lg~p~~~v 39 (72)
T 3mb2_A 15 EQKAELARALSAAAAAAFDVPLAEV 39 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGE
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccE
Confidence 3557899999999999999998643
No 29
>1gyx_A YDCE, B1461, hypothetical protein YDCE; tautomerase, isomerase, complete proteo; HET: EPE; 1.35A {Escherichia coli} SCOP: d.80.1.1 PDB: 1gyj_A* 1gyy_A*
Probab=34.61 E-value=44 Score=20.19 Aligned_cols=25 Identities=16% Similarity=0.296 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcccc
Q 047232 8 KKTTELALTLFELISEALGLNANRL 32 (175)
Q Consensus 8 ~~~~~l~~~ll~~la~~Lgl~~~~~ 32 (175)
++-.+++..|.+++.+.||++++..
T Consensus 15 eqk~~L~~~l~~~l~~~lgip~~~v 39 (76)
T 1gyx_A 15 QQKAALAADITDVIIRHLNSKDSSI 39 (76)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGC
T ss_pred HHHHHHHHHHHHHHHHHhCcCCceE
Confidence 3557899999999999999998643
No 30
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=31.92 E-value=20 Score=28.02 Aligned_cols=21 Identities=14% Similarity=0.183 Sum_probs=17.7
Q ss_pred CCCCccccCCCCCCceEEEec
Q 047232 54 PELTMGTDSHADTSFLTVLLQ 74 (175)
Q Consensus 54 ~~~~~g~~~HtD~g~lTiL~q 74 (175)
+...++..||.++.++|.+++
T Consensus 48 ~~~gf~~HPHrg~EtVTyvl~ 68 (277)
T 2p17_A 48 ERGTFDVHPHRGIETVTYVIS 68 (277)
T ss_dssp CTTCCCCEEECSEEEEEEEEE
T ss_pred CCCCCCCCCCCCcEEEEEEEE
Confidence 334677889999999999998
No 31
>2nys_A AGR_C_3712P; SSPB, stringent starvation protein B, NESG, ATR88, structural genomics, PSI-2, protein structure initiative; 2.70A {Agrobacterium tumefaciens str} SCOP: b.136.1.2
Probab=30.50 E-value=78 Score=23.08 Aligned_cols=63 Identities=13% Similarity=0.183 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCccc-c-ccccc-CCce---eeEeeeCCCCCCCCCCccccCCCCCCceEEEecCCCCCe
Q 047232 7 AKKTTELALTLFELISEALGLNANR-L-KDMDC-AEGL---FLLGHYYPACPEPELTMGTDSHADTSFLTVLLQDRLGGL 80 (175)
Q Consensus 7 ~~~~~~l~~~ll~~la~~Lgl~~~~-~-~~~~~-~~~~---~l~~~~Yp~~~~~~~~~g~~~HtD~g~lTiL~qd~~~GL 80 (175)
.++|+.+.+++|..++..=|||.+. | -.+.. ..+- ...-..||. =+||++|..-..|
T Consensus 13 ~~AlrgVvr~vL~~va~~g~LPg~HHFyITF~T~~pGV~i~~~L~~~YP~-----------------EMTIVLQhQF~dL 75 (176)
T 2nys_A 13 QDALRGVIRKVLGEVAATGRLPGDHHFFITFLTGAPGVRISQHLKSKYAE-----------------QMTIVIQHQFWDM 75 (176)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCCTTCCEEEEEESSSTTCBCCHHHHHHSSS-----------------EEEEEESSSCEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCccEEEEEEecCCCCccCCHHHHhhCCC-----------------ceEEEEEeeecCc
Confidence 4578888999999888866688642 2 11111 1111 111234553 4899999888999
Q ss_pred eEeeCC
Q 047232 81 QVLHEN 86 (175)
Q Consensus 81 qV~~~g 86 (175)
+|..+|
T Consensus 76 ~V~e~~ 81 (176)
T 2nys_A 76 KVTETG 81 (176)
T ss_dssp EECSSE
T ss_pred EEecCc
Confidence 998775
No 32
>3djh_A Macrophage migration inhibitory factor; homotrimer, cytokine, inflammatory response, isomerase, phosphoprotein; 1.25A {Homo sapiens} SCOP: d.80.1.3 PDB: 1ca7_A* 1ljt_A* 2ooh_A* 2ooz_A* 3b9s_A* 2oow_A* 3ce4_A 3dji_A* 3ijg_A* 3ijj_A* 3smb_A* 3smc_A* 3u18_A* 4f2k_A* 1gd0_A* 1gcz_A* 3jsf_A* 3jsg_A* 3jtu_A* 3l5p_A* ...
Probab=28.79 E-value=56 Score=21.41 Aligned_cols=24 Identities=21% Similarity=0.369 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccc
Q 047232 8 KKTTELALTLFELISEALGLNANR 31 (175)
Q Consensus 8 ~~~~~l~~~ll~~la~~Lgl~~~~ 31 (175)
++-.+++..|.+.+.+.||++++.
T Consensus 70 ~~n~~~s~~i~~~l~~~Lgi~~~r 93 (114)
T 3djh_A 70 AQNRSYSKLLCGLLAERLRISPDR 93 (114)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHHhCcCcce
Confidence 356789999999999999999864
No 33
>3ej9_A Alpha-subunit of trans-3-chloroacrylic acid dehal; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, isomerase, hydrolase; 1.50A {Pseudomonas pavonaceae} SCOP: d.80.1.1 PDB: 3ej3_A 1s0y_A 3ej7_A
Probab=26.84 E-value=72 Score=19.28 Aligned_cols=24 Identities=29% Similarity=0.390 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccc
Q 047232 8 KKTTELALTLFELISEALGLNANR 31 (175)
Q Consensus 8 ~~~~~l~~~ll~~la~~Lgl~~~~ 31 (175)
++-.+++..|.+++++.||++++.
T Consensus 15 eqK~~L~~~it~~l~~~lg~p~~~ 38 (76)
T 3ej9_A 15 EQKRALSAGLLRVISEATGEPREN 38 (76)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHHHCcCccc
Confidence 355789999999999999999864
No 34
>2qas_A SSPB, hypothetical protein; SSPB, adaptor, CLPX, unknown function, hydrolase activator; 2.55A {Caulobacter vibrioides} PDB: 2qaz_A
Probab=26.57 E-value=1.1e+02 Score=21.80 Aligned_cols=63 Identities=19% Similarity=0.158 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCccc-c-ccccc-CCce---eeEeeeCCCCCCCCCCccccCCCCCCceEEEecCCCCCe
Q 047232 7 AKKTTELALTLFELISEALGLNANR-L-KDMDC-AEGL---FLLGHYYPACPEPELTMGTDSHADTSFLTVLLQDRLGGL 80 (175)
Q Consensus 7 ~~~~~~l~~~ll~~la~~Lgl~~~~-~-~~~~~-~~~~---~l~~~~Yp~~~~~~~~~g~~~HtD~g~lTiL~qd~~~GL 80 (175)
.++|+.+.+++|..++..=||+.+. | -.+.. ..+- ...-..||. =+||++|..-..|
T Consensus 21 ~~AlrgVvr~vL~~va~~g~LPg~HHFyITF~T~~pGV~i~d~L~~~YP~-----------------EMTIVLQhQF~dL 83 (157)
T 2qas_A 21 QDALRGVVKAALKKAAAPGGLPEPHHLYITFKTKAAGVSGPQDLLSKYPD-----------------EMTIVLQHQYWDL 83 (157)
T ss_dssp HHHHHHHHHHHHHHHSSTTCSCTTCCEEEEEETTSTTCBCCHHHHHHSSS-----------------EEEEEESSSCEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCccEEEEEEecCCCCccCCHHHHhhCCC-----------------ceEEEEEeeecCc
Confidence 3466777777777777644477542 2 11111 1111 111234543 4899999888999
Q ss_pred eEeeCC
Q 047232 81 QVLHEN 86 (175)
Q Consensus 81 qV~~~g 86 (175)
+|..+|
T Consensus 84 ~V~e~~ 89 (157)
T 2qas_A 84 APGETF 89 (157)
T ss_dssp EECSSE
T ss_pred EEecCc
Confidence 998775
No 35
>3kan_A D-dopachrome tautomerase; immune response, cytokine, cytokine-inhibitor C; HET: RW1; 1.13A {Homo sapiens} SCOP: d.80.1.3 PDB: 1dpt_A* 3ker_A*
Probab=25.63 E-value=68 Score=21.21 Aligned_cols=23 Identities=22% Similarity=0.499 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHHcCCCccc
Q 047232 9 KTTELALTLFELISEALGLNANR 31 (175)
Q Consensus 9 ~~~~l~~~ll~~la~~Lgl~~~~ 31 (175)
+-.+++..|.+.+.+.||++++.
T Consensus 72 ~n~~~s~~i~~~l~~~Lgi~~~R 94 (117)
T 3kan_A 72 DNRSHSAHFFEFLTKELALGQDR 94 (117)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHHHHHHHHHHhCcCcCe
Confidence 46789999999999999999864
No 36
>4dh4_A MIF; trimer, isomerase; 1.82A {Toxoplasma gondii}
Probab=24.77 E-value=73 Score=20.74 Aligned_cols=24 Identities=25% Similarity=0.339 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccc
Q 047232 8 KKTTELALTLFELISEALGLNANR 31 (175)
Q Consensus 8 ~~~~~l~~~ll~~la~~Lgl~~~~ 31 (175)
++-.+++..|.+.+.+.||++++.
T Consensus 71 e~~~~l~~~i~~~l~~~Lgi~~~r 94 (114)
T 4dh4_A 71 STNCKIAAALSAACERHLGVPKNR 94 (114)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHHhCcCccc
Confidence 456789999999999999999864
No 37
>2wkb_A Macrophage migration inhibitory factor; cytokine; HET: CME; 1.78A {Plasmodium berghei} PDB: 3gad_A 3gac_A 2wkf_A*
Probab=24.46 E-value=67 Score=21.36 Aligned_cols=23 Identities=17% Similarity=0.174 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHcCCCcccc
Q 047232 10 TTELALTLFELISEALGLNANRL 32 (175)
Q Consensus 10 ~~~l~~~ll~~la~~Lgl~~~~~ 32 (175)
..+++..+-+++++.||.|+++.
T Consensus 16 ~~~l~~~l~~ala~~lgkPe~~~ 38 (125)
T 2wkb_A 16 AQNTLSEIEDAISNILGKPVAYI 38 (125)
T ss_dssp HHHHHHHHHHHHHHHHCSCCTTC
T ss_pred HHHHHHHHHHHHHHHhCCCHHHE
Confidence 57789999999999999999753
No 38
>3fwt_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.90A {Leishmania major}
Probab=23.42 E-value=78 Score=21.53 Aligned_cols=24 Identities=21% Similarity=0.326 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccc
Q 047232 8 KKTTELALTLFELISEALGLNANR 31 (175)
Q Consensus 8 ~~~~~l~~~ll~~la~~Lgl~~~~ 31 (175)
++-.+++..|.+.+.+.||++++.
T Consensus 92 e~n~~~s~~i~~~l~~~LgI~~~r 115 (133)
T 3fwt_A 92 SKPKMMTPRIAAAITKECGIPAER 115 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHHhCcChhh
Confidence 355788999999999999999864
No 39
>1u9d_A Hypothetical protein VC0714; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics; 1.70A {Vibrio cholerae o1 biovar eltor str} SCOP: d.80.1.5
Probab=22.63 E-value=86 Score=21.36 Aligned_cols=26 Identities=23% Similarity=0.239 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccccc
Q 047232 8 KKTTELALTLFELISEALGLNANRLK 33 (175)
Q Consensus 8 ~~~~~l~~~ll~~la~~Lgl~~~~~~ 33 (175)
+.+..++..|+.-|++..+.+++.|.
T Consensus 27 e~v~~lS~~Lid~La~i~~~~~e~fT 52 (122)
T 1u9d_A 27 HIVESLVPTLLNELSSLLSTARNAFT 52 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCE
T ss_pred HHHHHHhHHHHHHHHHHHCCCcccEE
Confidence 46789999999999999999998775
No 40
>2xcz_A Possible ATLS1-like light-inducible protein; cytokine, tautomerase, immune system, cyanobacterium; 1.64A {Prochlorococcus marinus}
Probab=21.78 E-value=72 Score=20.70 Aligned_cols=22 Identities=23% Similarity=0.223 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHHcCCCccc
Q 047232 10 TTELALTLFELISEALGLNANR 31 (175)
Q Consensus 10 ~~~l~~~ll~~la~~Lgl~~~~ 31 (175)
-.++...+-+++++.||.|+++
T Consensus 16 ~~~l~~~~~~~l~~~lgkp~~~ 37 (115)
T 2xcz_A 16 ANSLLQELSSKLAELLGKPEKY 37 (115)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHHHHHHHHHHCCChHH
Confidence 4678889999999999999874
No 41
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=21.62 E-value=1.8e+02 Score=21.95 Aligned_cols=44 Identities=18% Similarity=0.271 Sum_probs=31.8
Q ss_pred EEEEeecCCeEEEEecccccc-----CCCCeEEEEEeeccCCCCCCceEeecC
Q 047232 88 WVNVTPIHGALVVNLGDMMQA-----NVGPRVSVACFFRSHFQSEKARLYGPI 135 (175)
Q Consensus 88 W~~V~p~~~~~vVniGd~le~-----~~~~R~Si~~F~~p~~d~~~~~~i~pl 135 (175)
|+.++..+|.+++.-|.++.. +...|.++.+-+.+.. ++...+.
T Consensus 227 ~v~~~~~aGd~~~f~~~~~H~s~~N~s~~~R~~~~~~~~~~~----~~~~~~~ 275 (291)
T 2opw_A 227 FVPTPVQRGALVLIHGEVVHKSKQNLSDRSRQAYTFHLMEAS----GTTWSPE 275 (291)
T ss_dssp CEEECBCTTCEEEEETTCEEEECCBCSSSCCCEEEEEEEECT----TCEECTT
T ss_pred eeecccCCCcEEEEcCCceecCCCCCCCCceEEEEEEEEcCC----CCccCcc
Confidence 566777788888888877776 4568999998888764 3555543
No 42
>1uiz_A MIF, macrophage migration inhibitory factor; cytokine, tautomerase; 2.50A {Xenopus laevis} SCOP: d.80.1.3
Probab=20.76 E-value=98 Score=20.01 Aligned_cols=24 Identities=21% Similarity=0.419 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccc
Q 047232 8 KKTTELALTLFELISEALGLNANR 31 (175)
Q Consensus 8 ~~~~~l~~~ll~~la~~Lgl~~~~ 31 (175)
++-.++++.|.+.+.+.||++++.
T Consensus 71 eqk~~l~~~i~~~l~~~lgi~~~~ 94 (115)
T 1uiz_A 71 PQNKSYTKLLCDILTKQLNIPANR 94 (115)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHHhCcCcce
Confidence 345788999999999999999853
No 43
>1hfo_A Migration inhibitory factor; tautomerase; 1.65A {Trichinella spiralis} SCOP: d.80.1.3
Probab=20.73 E-value=99 Score=19.88 Aligned_cols=24 Identities=25% Similarity=0.549 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccc
Q 047232 8 KKTTELALTLFELISEALGLNANR 31 (175)
Q Consensus 8 ~~~~~l~~~ll~~la~~Lgl~~~~ 31 (175)
++-.++++.|.+.+.+.||++++.
T Consensus 70 eqk~~l~~~i~~~l~~~lgi~~~~ 93 (113)
T 1hfo_A 70 SRNRDHSAKLFDHLNTKLGIPKNR 93 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHHhCcCcCe
Confidence 345788999999999999999853
No 44
>1uty_A Non-structural protein 2; viral protein, RNA binding protein; 2.4A {Bluetongue virus} SCOP: b.147.1.1
Probab=20.40 E-value=72 Score=23.36 Aligned_cols=33 Identities=21% Similarity=0.210 Sum_probs=25.6
Q ss_pred CCCCeeEeeC--Ce--EEEEeecCCeEEEEecccccc
Q 047232 76 RLGGLQVLHE--NE--WVNVTPIHGALVVNLGDMMQA 108 (175)
Q Consensus 76 ~~~GLqV~~~--g~--W~~V~p~~~~~vVniGd~le~ 108 (175)
...|+|+..+ .+ +-.|.+.|.+..||+|+.+--
T Consensus 80 s~~GvE~t~eRWee~kFE~v~~~p~~~~i~igg~~~d 116 (187)
T 1uty_A 80 TPHGVEATTERWEEWKFEGVSVTPMATRVQYNGVMVD 116 (187)
T ss_dssp CSSCEEEESSCCTTBCCEEEECEEEEEEEEETTEEEE
T ss_pred eccceeeeccchhcceeeeeccccceEEEEECCEeee
Confidence 4578898865 44 458999999999999987653
No 45
>3b64_A Macrophage migration inhibitory factor-like protein; cytokine, MIF, LM1740MIF, lmmif, unknown function; 1.03A {Leishmania major}
Probab=20.23 E-value=79 Score=20.41 Aligned_cols=23 Identities=13% Similarity=0.306 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHH-HHcCCCcccc
Q 047232 10 TTELALTLFELIS-EALGLNANRL 32 (175)
Q Consensus 10 ~~~l~~~ll~~la-~~Lgl~~~~~ 32 (175)
-.+++..+-++++ +.+|.|+++.
T Consensus 15 ~~~l~~~~~~~l~~~~~gkPe~~~ 38 (112)
T 3b64_A 15 KRENLAQVYRAVTRDVLGKPEDLV 38 (112)
T ss_dssp HHHHHHHHHHHHHHHTSCSCGGGC
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHE
Confidence 5678899999999 9999999853
Done!