BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 047237
         (245 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|A7A063|NFT1_YEAS7 ABC transporter NFT1 OS=Saccharomyces cerevisiae (strain YJM789)
           GN=NFT1 PE=3 SV=1
          Length = 1558

 Score = 39.3 bits (90), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 60/150 (40%), Gaps = 25/150 (16%)

Query: 59  AITVITSNISAATFLSTVSLTLSSLIGAWLGSSTNNIFESELILGDTRASTISIKYISLL 118
           A+ ++ S +  + F  T +L     +  W  +   N    +LIL D R S IS    S+ 
Sbjct: 468 ALMILYSLLGWSAFAGTFALLAMIPLNFWCATFYGNYQADQLILTDKRTSGISEALNSIR 527

Query: 119 SCFLLAFSCFVQSTRHFVHATYLISMPEDNVPVKYAEIAIIKGGEFWSLGLRALYFALNL 178
              LLA+                           Y +I  ++ GE   L  +A  F LN 
Sbjct: 528 VIKLLAWENLF-----------------------YQKIINVRDGEIRLLKKKATIFFLNH 564

Query: 179 LLWFFGPIPMFLSSIILVIILHYLDTNTTP 208
           L+WFFG  P  +S+I   + + + +   TP
Sbjct: 565 LIWFFG--PTLVSAITFSVFIKFQNQTLTP 592


>sp|P0CE70|NFT1_YEASX ABC transporter NFT1 OS=Saccharomyces cerevisiae GN=NFT1 PE=2 SV=1
          Length = 1558

 Score = 39.3 bits (90), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 60/150 (40%), Gaps = 25/150 (16%)

Query: 59  AITVITSNISAATFLSTVSLTLSSLIGAWLGSSTNNIFESELILGDTRASTISIKYISLL 118
           A+ ++ S +  + F  T +L     +  W  +   N    +LIL D R S IS    S+ 
Sbjct: 468 ALMILYSLLGWSAFAGTFALLAMIPLNFWCATFYGNYQADQLILTDKRTSGISEALNSIR 527

Query: 119 SCFLLAFSCFVQSTRHFVHATYLISMPEDNVPVKYAEIAIIKGGEFWSLGLRALYFALNL 178
              LLA+                           Y +I  ++ GE   L  +A  F LN 
Sbjct: 528 VIKLLAWENLF-----------------------YQKIINVRDGEIRLLKKKATIFFLNH 564

Query: 179 LLWFFGPIPMFLSSIILVIILHYLDTNTTP 208
           L+WFFG  P  +S+I   + + + +   TP
Sbjct: 565 LIWFFG--PTLVSAITFSVFIKFQNQTLTP 592


>sp|C8ZCR2|NFT1_YEAS8 ABC transporter NFT1 OS=Saccharomyces cerevisiae (strain Lalvin
           EC1118 / Prise de mousse) GN=NFT1 PE=3 SV=1
          Length = 1558

 Score = 39.3 bits (90), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 60/150 (40%), Gaps = 25/150 (16%)

Query: 59  AITVITSNISAATFLSTVSLTLSSLIGAWLGSSTNNIFESELILGDTRASTISIKYISLL 118
           A+ ++ S +  + F  T +L     +  W  +   N    +LIL D R S IS    S+ 
Sbjct: 468 ALMILYSLLGWSAFAGTFALLAMIPLNFWCATFYGNYQADQLILTDKRTSGISEALNSIR 527

Query: 119 SCFLLAFSCFVQSTRHFVHATYLISMPEDNVPVKYAEIAIIKGGEFWSLGLRALYFALNL 178
              LLA+                           Y +I  ++ GE   L  +A  F LN 
Sbjct: 528 VIKLLAWENLF-----------------------YQKIINVRDGEIRLLKKKATIFFLNH 564

Query: 179 LLWFFGPIPMFLSSIILVIILHYLDTNTTP 208
           L+WFFG  P  +S+I   + + + +   TP
Sbjct: 565 LIWFFG--PTLVSAITFSVFIKFQNQTLTP 592


>sp|P0CE68|NFT1_YEAST ABC transporter NFT1 OS=Saccharomyces cerevisiae (strain ATCC
           204508 / S288c) GN=NFT1 PE=2 SV=1
          Length = 1218

 Score = 38.9 bits (89), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 60/150 (40%), Gaps = 25/150 (16%)

Query: 59  AITVITSNISAATFLSTVSLTLSSLIGAWLGSSTNNIFESELILGDTRASTISIKYISLL 118
           A+ ++ S +  + F  T +L     +  W  +   N    +LIL D R S IS    S+ 
Sbjct: 468 ALMILYSLLGWSAFAGTFALLAMIPLNFWCATFYGNYQADQLILTDKRTSGISEALNSIR 527

Query: 119 SCFLLAFSCFVQSTRHFVHATYLISMPEDNVPVKYAEIAIIKGGEFWSLGLRALYFALNL 178
              LLA+                           Y +I  ++ GE   L  +A  F LN 
Sbjct: 528 VIKLLAWENLF-----------------------YQKIINVRDGEIRLLKKKATIFFLNH 564

Query: 179 LLWFFGPIPMFLSSIILVIILHYLDTNTTP 208
           L+WFFG  P  +S+I   + + + +   TP
Sbjct: 565 LIWFFG--PTLVSAITFSVFIKFQNQTLTP 592


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.326    0.139    0.423 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,051,247
Number of Sequences: 539616
Number of extensions: 3318906
Number of successful extensions: 9802
Number of sequences better than 100.0: 7
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 9791
Number of HSP's gapped (non-prelim): 10
length of query: 245
length of database: 191,569,459
effective HSP length: 114
effective length of query: 131
effective length of database: 130,053,235
effective search space: 17036973785
effective search space used: 17036973785
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 60 (27.7 bits)