Query 047238
Match_columns 446
No_of_seqs 293 out of 1734
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 15:51:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047238.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047238hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 3.1E-62 1.1E-66 491.2 27.3 339 83-440 6-399 (413)
2 3psg_A Pepsinogen; hydrolase(a 100.0 1.4E-61 4.8E-66 480.5 27.0 306 85-440 45-370 (370)
3 2x0b_A Renin; hydrolase-hormon 100.0 7.2E-61 2.5E-65 476.3 22.3 303 86-440 51-383 (383)
4 1tzs_A Cathepsin E; hydrolase, 100.0 6.1E-60 2.1E-64 466.4 28.2 313 85-446 12-348 (351)
5 1j71_A Candidapepsin, aspartic 100.0 3.1E-60 1.1E-64 465.5 25.1 305 85-445 2-329 (334)
6 2qzx_A Candidapepsin-5; aspart 100.0 9.3E-60 3.2E-64 463.7 26.1 308 85-445 2-336 (342)
7 1am5_A Pepsin, acid proteinase 100.0 2.2E-59 7.5E-64 457.7 26.8 303 86-440 2-324 (324)
8 3cms_A Chymosin B; hydrolase, 100.0 1.9E-59 6.6E-64 457.8 23.6 304 86-440 4-323 (323)
9 3aup_A SBG7S, BG, basic 7S glo 100.0 1.2E-58 4.1E-63 465.3 28.6 336 85-443 9-396 (403)
10 1mpp_A Pepsin; hydrolase(acid 100.0 1.1E-58 3.9E-63 459.3 27.5 318 83-444 5-359 (361)
11 1htr_B Gastricsin; aspartyl pr 100.0 5.6E-59 1.9E-63 455.8 25.0 305 87-440 4-329 (329)
12 3fv3_A SAPP1P-secreted asparti 100.0 1.5E-58 5.1E-63 454.8 27.8 305 85-444 2-333 (339)
13 4aa9_A Chymosin; hydrolase, as 100.0 1.8E-59 6.3E-64 457.6 21.1 302 88-440 3-320 (320)
14 1dpj_A Proteinase A; proteinas 100.0 7.8E-59 2.7E-63 454.7 25.5 304 86-440 3-329 (329)
15 3pvk_A Candidapepsin-2; hydrol 100.0 8E-59 2.7E-63 457.3 25.4 308 85-444 2-335 (342)
16 2apr_A Rhizopuspepsin; hydrola 100.0 3.1E-58 1.1E-62 449.5 27.7 304 86-440 6-324 (325)
17 2bju_A Plasmepsin II; aspartic 100.0 3.3E-59 1.1E-63 471.8 21.3 301 86-440 128-450 (453)
18 3c9x_A Trichoderma reesei aspa 100.0 2.4E-58 8.4E-63 451.0 23.1 301 91-439 11-329 (329)
19 1miq_A Plasmepsin; aspartic pr 100.0 6.1E-58 2.1E-62 455.1 24.9 303 85-440 51-374 (375)
20 1oew_A Endothiapepsin; hydrola 100.0 4.4E-58 1.5E-62 449.2 23.0 299 92-439 12-329 (329)
21 3k1w_A Renin; protease, altern 100.0 2.9E-58 1E-62 453.1 21.6 305 84-440 6-340 (341)
22 1qdm_A Prophytepsin; aspartic 100.0 1.3E-56 4.4E-61 457.4 27.8 313 85-440 41-478 (478)
23 1yg9_A Aspartic protease BLA G 100.0 1.1E-56 3.6E-61 439.4 25.3 304 85-440 6-329 (330)
24 3qvc_A Histo-aspartic protease 100.0 9.9E-57 3.4E-61 454.3 25.3 304 84-440 125-449 (451)
25 1ibq_A Aspergillopepsin; aspar 100.0 2.3E-56 7.7E-61 436.3 23.1 297 92-440 11-325 (325)
26 1izd_A Aspartic proteinase; su 100.0 1.6E-56 5.4E-61 436.9 21.2 296 92-440 12-323 (323)
27 2ewy_A Beta-secretase 2; BACE2 100.0 1.8E-55 6E-60 439.9 28.1 321 88-443 5-358 (383)
28 3lpj_A Beta-secretase 1; alzhe 100.0 2.5E-55 8.4E-60 447.9 27.2 321 88-444 66-424 (455)
29 1bxo_A Protein (penicillopepsi 100.0 2.6E-56 9E-61 435.5 19.1 295 92-440 12-323 (323)
30 3vf3_A Beta-secretase 1; struc 100.0 6.9E-55 2.4E-59 438.3 28.3 316 93-444 26-378 (402)
31 2qp8_A Beta-secretase 1; BACE1 100.0 4.7E-55 1.6E-59 438.4 26.4 320 88-443 13-370 (395)
32 1t6e_X Xylanase inhibitor; two 100.0 1.3E-54 4.4E-59 432.9 23.7 323 86-441 3-374 (381)
33 1wkr_A Polyporopepsin; hydrola 100.0 2.5E-54 8.5E-59 424.7 24.9 298 87-445 4-338 (340)
34 1b5f_A Protein (cardosin A); h 100.0 6.7E-44 2.3E-48 332.6 16.9 221 87-342 4-238 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 1.3E-38 4.4E-43 297.7 18.8 217 197-440 2-241 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 1.1E-23 3.6E-28 166.7 9.5 88 87-193 4-96 (97)
37 1b5f_B Protein (cardosin A); h 99.7 3.1E-17 1.1E-21 127.2 7.7 77 359-440 3-87 (87)
38 2i1a_A DNA damage-inducible pr 94.8 0.034 1.1E-06 46.5 5.2 31 93-125 23-53 (148)
39 2i1a_A DNA damage-inducible pr 93.8 0.077 2.6E-06 44.2 5.3 26 412-437 109-134 (148)
40 3s8i_A Protein DDI1 homolog 1; 89.6 0.65 2.2E-05 38.6 6.2 27 412-438 108-134 (148)
41 1fmb_A EIAV protease; hydrolas 87.0 0.59 2E-05 36.3 4.0 26 98-125 10-35 (104)
42 2hs1_A HIV-1 protease; ultra-h 86.4 0.67 2.3E-05 35.5 3.9 27 98-126 10-36 (99)
43 3ec0_A Protease; HIV-2, inhibi 84.1 1.1 3.9E-05 34.2 4.2 27 98-126 10-36 (99)
44 3liy_A Protease; hydrolase, hy 81.6 1.3 4.5E-05 34.6 3.7 31 98-128 12-45 (116)
45 2hah_A Protease, retropepsin; 79.0 1.7 5.9E-05 34.3 3.7 25 98-125 16-40 (116)
46 3sqf_A Protease; folded monome 75.3 2.8 9.7E-05 32.8 4.0 27 98-126 11-37 (114)
47 3s8i_A Protein DDI1 homolog 1; 75.3 2.4 8.1E-05 35.1 3.8 32 93-126 21-52 (148)
48 3slz_A GAG-Pro-POL polyprotein 66.7 5.9 0.0002 32.0 4.1 28 97-126 23-50 (132)
49 3ka2_A [L-Ala51;Gly51']HIV-1 p 61.3 6.7 0.00023 34.1 3.8 25 98-124 10-34 (203)
50 2rsp_A RSV protease; hydrolase 60.0 6.4 0.00022 31.3 3.1 22 103-126 27-48 (124)
51 1lya_A Cathepsin D; lysosomal 49.2 14 0.00049 27.8 3.5 16 317-332 30-45 (97)
52 1bxo_A Protein (penicillopepsi 41.0 23 0.0008 32.9 4.3 43 270-333 4-46 (323)
53 1ibq_A Aspergillopepsin; aspar 40.7 31 0.0011 32.1 5.2 33 283-333 13-45 (325)
54 3c9x_A Trichoderma reesei aspa 40.0 23 0.0008 33.0 4.2 40 88-127 186-231 (329)
55 3ka2_A [L-Ala51;Gly51']HIV-1 p 39.4 25 0.00084 30.5 3.8 27 97-125 113-139 (203)
56 1izd_A Aspartic proteinase; su 38.5 25 0.00087 32.7 4.1 42 271-333 5-46 (323)
57 1mpp_A Pepsin; hydrolase(acid 37.1 44 0.0015 31.5 5.7 43 270-331 5-49 (361)
58 2apr_A Rhizopuspepsin; hydrola 37.1 35 0.0012 31.7 4.9 16 317-332 32-47 (325)
59 3aup_A SBG7S, BG, basic 7S glo 36.6 34 0.0012 32.9 4.8 42 274-331 11-52 (403)
60 3cms_A Chymosin B; hydrolase, 35.2 47 0.0016 30.8 5.4 45 271-332 2-46 (323)
61 3vla_A EDGP; extracellular, in 35.1 30 0.001 33.6 4.2 46 270-331 6-51 (413)
62 1oew_A Endothiapepsin; hydrola 31.0 57 0.002 30.3 5.3 16 317-332 32-47 (329)
63 1b5f_A Protein (cardosin A); h 29.9 50 0.0017 29.1 4.5 33 94-126 187-227 (239)
64 1lya_B Cathepsin D; lysosomal 24.2 66 0.0023 28.2 4.2 33 94-126 98-137 (241)
65 3slz_A GAG-Pro-POL polyprotein 23.9 64 0.0022 25.8 3.5 25 292-331 26-50 (132)
66 1t6e_X Xylanase inhibitor; two 23.0 45 0.0015 31.7 3.0 35 275-330 5-39 (381)
67 1yg9_A Aspartic protease BLA G 22.0 57 0.0019 30.3 3.4 15 317-331 32-46 (330)
68 3fv3_A SAPP1P-secreted asparti 21.4 84 0.0029 29.1 4.5 15 317-331 29-43 (339)
69 1j71_A Candidapepsin, aspartic 21.2 86 0.0029 29.1 4.5 15 317-331 29-43 (334)
70 2hs1_A HIV-1 protease; ultra-h 21.1 47 0.0016 25.1 2.0 30 286-330 6-35 (99)
71 2hah_A Protease, retropepsin; 20.9 70 0.0024 24.9 3.1 31 284-330 10-40 (116)
72 3pvk_A Candidapepsin-2; hydrol 20.5 78 0.0027 29.4 4.0 15 317-331 29-43 (342)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=3.1e-62 Score=491.20 Aligned_cols=339 Identities=22% Similarity=0.423 Sum_probs=283.3
Q ss_pred cccccccce--ecCccEEEEEEECCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCccceecCCCCCCCC-
Q 047238 83 LEDIHLPMA--KQDLFYSVEVNIGTPMKPQHLLFDTASSLVWTQCQPCIRCFDQTTPIFDPRASTTYSEIPCDDPLCRS- 159 (446)
Q Consensus 83 ~~~~~~pl~--~~~~~Y~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~- 159 (446)
.+.+..|++ ..+++|+++|.||||||+|.|+|||||+++||+|..| .+|+|++.+.|.++.|..
T Consensus 6 ~~~~~~pv~~d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c-------------~~Sst~~~v~C~s~~C~~~ 72 (413)
T 3vla_A 6 PSALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN-------------YVSSTYRPVRCRTSQCSLS 72 (413)
T ss_dssp CSEEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS-------------CCCTTCEECBTTSHHHHHT
T ss_pred CccEEEEeeecCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC-------------CCCCCcCccCCCccccccc
Confidence 346788988 5789999999999999999999999999999998865 479999999999988864
Q ss_pred C------------CCCCCCCceeeeee-CCCceEEEEEEEEEEEeecCCC-----ccccccEEEEeeecCCCCcCCCCcc
Q 047238 160 P------------FKCQNGKCVYTRRY-HVGDVTRGLASRETFAFPVRNG-----FTFVPRLAFGCSNDNSGFAFGGKIS 221 (446)
Q Consensus 160 ~------------~~C~~~~~~~~~~Y-~~g~~~~G~~~~D~v~l~~~~~-----~~~~~~~~fg~~~~~~~~~~~~~~~ 221 (446)
. ..|.++.|.|.+.| ++|+.+.|.+++|+|+|+..+| .+.++++.|||++.+.....+..++
T Consensus 73 ~~~~~~~c~s~~~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~~~~d 152 (413)
T 3vla_A 73 GSIACGDCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLASGVV 152 (413)
T ss_dssp TCCEEECCSSCCBTTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSCTTCC
T ss_pred ccCCCcccccCCCCCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCcccccc
Confidence 1 24566679999999 5888799999999999986443 2678899999999863201235789
Q ss_pred eeEecCCCCCchhHhhhhh--ccCceEEeeecCCCCceeEEEccCC-cc-----CCCC-ceeeeeecCCCC---------
Q 047238 222 GILGFNASPLSLSSQLRNR--IQGLFSYCLVREMEATSVIKFGRDA-DV-----RRRD-LETTPILLSDLR--------- 283 (446)
Q Consensus 222 GIlGLg~~~~s~~~Ql~~~--~~~~Fs~~l~~~~~~~g~l~fGg~d-~~-----~~g~-l~~~p~~~~~~~--------- 283 (446)
||||||++.+++++||.++ ..++||+||.+.....|.|+||++| .. +.++ +.|+||+.++..
T Consensus 153 GIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~ 232 (413)
T 3vla_A 153 GMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGE 232 (413)
T ss_dssp EEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTC
T ss_pred cccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCccccccccccC
Confidence 9999999999999998864 3599999999865678999999998 32 5678 999999986422
Q ss_pred --CeEEEEeeeEEEecEEEeeCCCccccccCCCCcEEEeccCccccccchHHHHHHHHHHHHHh---ccCCCCCCCCCCC
Q 047238 284 --PHFYLHLLEISIGRHIVRFPPGAFDIMRDGTGGFIIDTGTPVTFIRNGPYQTLMQRYDQILR---SLGRQRIPYNASQ 358 (446)
Q Consensus 284 --~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~---~~~~~~~~~~~~~ 358 (446)
.+|+|+|++|+||++.+.++...+.++.++.+++||||||++++||+++|++|.++|.+.+. +++... ..
T Consensus 233 ~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~-----~~ 307 (413)
T 3vla_A 233 PSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVAS-----VA 307 (413)
T ss_dssp CCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECC-----CT
T ss_pred CCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCC-----CC
Confidence 69999999999999999988777777666678899999999999999999999999999874 222221 23
Q ss_pred CCccccccCCCC-----CCcCeEEEEEcC--eEEEEcCCCeEEEEcCCCceEEEEEcCC----CceeechhhhceeEEEE
Q 047238 359 EFDYCYRYDSSF-----KAYPSMTFHLQE--ADYIVQPENMYFIEPDRGRFCVAIQDDP----KYSILGAWQQQNMLIIY 427 (446)
Q Consensus 359 ~~~~C~~~~~~~-----~~~p~i~~~f~g--~~~~l~~~~~y~~~~~~~~~C~~~~~~~----~~~ilG~~fl~~~y~vf 427 (446)
.++.|+..+... ..+|+|+|+|+| ++|+|++++ |+++..++..|++++..+ +.||||+.|||++|+||
T Consensus 308 ~~~~C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~-y~~~~~~~~~Cl~~~~~~~~~~~~~IlGd~fl~~~~vvf 386 (413)
T 3vla_A 308 PFGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSN-SMVYINDNVVCLGVVDGGSNLRTSIVIGGHQLEDNLVQF 386 (413)
T ss_dssp TCSCEEECTTCCEETTEECCCCEEEECSSTTCEEEECHHH-HEEEEETTEEEECEEEEESSCSSSEEECHHHHTTEEEEE
T ss_pred CCcceeccCCccccccccCCCcEEEEEcCCcEEEEeCccc-eEEEeCCCcEEEEEEecCCCcccceeEehhhhcCeEEEE
Confidence 568999875332 378999999998 899999999 999876677899886532 58999999999999999
Q ss_pred ECCCCEEEEEeCC
Q 047238 428 DLNVPALRFGSEN 440 (446)
Q Consensus 428 D~~~~riGfa~~~ 440 (446)
|++++|||||++.
T Consensus 387 D~~~~riGfa~~~ 399 (413)
T 3vla_A 387 DLATSRVGFSGTL 399 (413)
T ss_dssp ETTTTEEEEEEEG
T ss_pred ECCCCEEEEEEec
Confidence 9999999999843
No 2
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=1.4e-61 Score=480.50 Aligned_cols=306 Identities=20% Similarity=0.295 Sum_probs=261.0
Q ss_pred cccccce-ecCccEEEEEEECCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCccceecCCCCCCCCCCCC
Q 047238 85 DIHLPMA-KQDLFYSVEVNIGTPMKPQHLLFDTASSLVWTQCQPCIRCFDQTTPIFDPRASTTYSEIPCDDPLCRSPFKC 163 (446)
Q Consensus 85 ~~~~pl~-~~~~~Y~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~C 163 (446)
...+||. +.+.+|+++|+||||||+|.|+|||||+++||+|..|..|.|..++.|||++|+|++..+
T Consensus 45 ~~~~~l~n~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~~C~~~~~y~~~~SsT~~~~~------------ 112 (370)
T 3psg_A 45 IGDEPLENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSDHNQFNPDDSSTFEATS------------ 112 (370)
T ss_dssp SCCCTTGGGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCEEEE------------
T ss_pred cceecceeccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCcccCCCCCCCCccCcCcEECC------------
Confidence 4568888 789999999999999999999999999999999999998888999999999999999988
Q ss_pred CCCCceeeeeeCCCceEEEEEEEEEEEeecCCCccccccEEEEeeecCCCCcCCC--CcceeEecCCCCCc------hhH
Q 047238 164 QNGKCVYTRRYHVGDVTRGLASRETFAFPVRNGFTFVPRLAFGCSNDNSGFAFGG--KISGILGFNASPLS------LSS 235 (446)
Q Consensus 164 ~~~~~~~~~~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~~fg~~~~~~~~~~~~--~~~GIlGLg~~~~s------~~~ 235 (446)
|.|.+.|++|+ +.|.+++|+|+|+ ++.++++.|||++...+ ..+. .++||||||++..+ +++
T Consensus 113 ----~~~~i~Yg~Gs-~~G~~~~Dtv~ig----~~~v~~~~Fg~a~~~~~-~~~~~~~~dGIlGLg~~~~s~~~~~~~~~ 182 (370)
T 3psg_A 113 ----QELSITYGTGS-MTGILGYDTVQVG----GISDTNQIFGLSETEPG-SFLYYAPFDGILGLAYPSISASGATPVFD 182 (370)
T ss_dssp ----EEEEEESSSCE-EEEEEEEEEEEET----TEEEEEEEEEEECSCCC-GGGGGCSCSEEEECSCGGGCGGGCCCHHH
T ss_pred ----cEEEEEeCCce-EEEEEEEEEEeeC----CcccCCeEEEEEEeecc-cccccCCccceeccCCccccccCCCCHHH
Confidence 88999999999 9999999999999 58999999999998876 4332 78999999998765 344
Q ss_pred hhhhh---ccCceEEeeecCCCCceeEEEccCC-ccCCCCceeeeeecCCCCCeEEEEeeeEEEecEEEeeCCCcccccc
Q 047238 236 QLRNR---IQGLFSYCLVREMEATSVIKFGRDA-DVRRRDLETTPILLSDLRPHFYLHLLEISIGRHIVRFPPGAFDIMR 311 (446)
Q Consensus 236 Ql~~~---~~~~Fs~~l~~~~~~~g~l~fGg~d-~~~~g~l~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~ 311 (446)
+|.++ ..++||+||.++....|.|+|||+| ++|.|++.|+|+.. ..+|.|.+++|+|+++.+....
T Consensus 183 ~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~~pv~~---~~~w~v~l~~i~v~g~~~~~~~------- 252 (370)
T 3psg_A 183 NLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVSV---EGYWQITLDSITMDGETIACSG------- 252 (370)
T ss_dssp HHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECSE---ETTEEEEECEEESSSSEEECTT-------
T ss_pred HHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCcceeecccc---cceeEEEEeEEEECCEEEecCC-------
Confidence 55443 4789999999865578999999999 89999999999987 6899999999999998776432
Q ss_pred CCCCcEEEeccCccccccchHHHHHHHHHHHHHhccCCCCCCCCCCCCCccccccCCCCCCcCeEEEEEcCeEEEEcCCC
Q 047238 312 DGTGGFIIDTGTPVTFIRNGPYQTLMQRYDQILRSLGRQRIPYNASQEFDYCYRYDSSFKAYPSMTFHLQEADYIVQPEN 391 (446)
Q Consensus 312 ~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~i~~~f~g~~~~l~~~~ 391 (446)
...+||||||+++++|++++++|.+++++... .. ..+.++|+..+ .+|+|+|+|+|++++||+++
T Consensus 253 --~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~-----~~----g~~~v~C~~~~----~lP~i~f~~~g~~~~l~~~~ 317 (370)
T 3psg_A 253 --GCQAIVDTGTSLLTGPTSAIANIQSDIGASEN-----SD----GEMVISCSSID----SLPDIVFTIDGVQYPLSPSA 317 (370)
T ss_dssp --CEEEEECTTCCSEEEEHHHHHHHHHHTTCEEC-----TT----CCEECCGGGGG----GCCCEEEEETTEEEEECHHH
T ss_pred --CceEEEcCCCCcEECCHHHHHHHHHHhCCccc-----CC----CcEEEECCCcc----cCCcEEEEECCEEEEECHHH
Confidence 25799999999999999999999999865421 11 23458999876 89999999999999999999
Q ss_pred eEEEEcCCCceEEE-EEc------CCCceeechhhhceeEEEEECCCCEEEEEeCC
Q 047238 392 MYFIEPDRGRFCVA-IQD------DPKYSILGAWQQQNMLIIYDLNVPALRFGSEN 440 (446)
Q Consensus 392 ~y~~~~~~~~~C~~-~~~------~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 440 (446)
|+++ .+..|+. +.. .++.||||++|||++|+|||++++|||||+++
T Consensus 318 -yi~~--~~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~ 370 (370)
T 3psg_A 318 -YILQ--DDDSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp -HEEE--CSSCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred -hccc--CCCEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence 9998 3346985 443 12369999999999999999999999999975
No 3
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=7.2e-61 Score=476.31 Aligned_cols=303 Identities=19% Similarity=0.316 Sum_probs=258.7
Q ss_pred ccccce-ecCccEEEEEEECCCCceEEEEEEcCCCceeEeCCCCC----CCCCCCCCCCCCCCCCccceecCCCCCCCCC
Q 047238 86 IHLPMA-KQDLFYSVEVNIGTPMKPQHLLFDTASSLVWTQCQPCI----RCFDQTTPIFDPRASTTYSEIPCDDPLCRSP 160 (446)
Q Consensus 86 ~~~pl~-~~~~~Y~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~~~C~----~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~ 160 (446)
..+||. +.+.+|+++|+||||||+|.|+|||||+++||+|..|. .| ..++.|||++|+|++..+
T Consensus 51 ~~~~l~n~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~~~~~C--~~~~~y~~~~SsT~~~~~--------- 119 (383)
T 2x0b_A 51 SSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTAC--VYHKLFDASDSSSYKHNG--------- 119 (383)
T ss_dssp CEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHH--HTSCCBCGGGCTTCEEEE---------
T ss_pred ceEeeeecCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCCCCcccc--cCCCCCCCCCCCcEEECC---------
Confidence 458888 68999999999999999999999999999999999995 57 567999999999999988
Q ss_pred CCCCCCCceeeeeeCCCceEEEEEEEEEEEeecCCCccccccEEEEeeecCCCCcCC--CCcceeEecCCCCCc------
Q 047238 161 FKCQNGKCVYTRRYHVGDVTRGLASRETFAFPVRNGFTFVPRLAFGCSNDNSGFAFG--GKISGILGFNASPLS------ 232 (446)
Q Consensus 161 ~~C~~~~~~~~~~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~~fg~~~~~~~~~~~--~~~~GIlGLg~~~~s------ 232 (446)
|.|.++|++|+ +.|.+++|+|+|+ ++.++ +.|||++.+.+ ..+ ..++||||||++..+
T Consensus 120 -------~~~~i~Yg~Gs-~~G~~~~Dtv~ig----~~~v~-~~Fg~a~~~~g-~~f~~~~~dGIlGLg~~~~s~~~~~~ 185 (383)
T 2x0b_A 120 -------TELTLRYSTGT-VSGFLSQDIITVG----GITVT-QMFGEVTEMPA-LPFMLAEFDGVVGMGFIEQAIGRVTP 185 (383)
T ss_dssp -------EEEEEECSSCE-EEEEEEEEEEEET----TEEEE-EEEEEEEECCH-HHHTTCSSSEEEECSCGGGCGGGCCC
T ss_pred -------cEEEEEcCCcc-EEEEEEeeEEEEc----CceEE-EEEEEEEecCC-cccccCCCceEeccCCCccccCCCCc
Confidence 88999999999 9999999999999 57888 99999998765 333 378999999998776
Q ss_pred hhHhhhhh---ccCceEEeeecCCC----CceeEEEccCC-ccCCCCceeeeeecCCCCCeEEEEeeeEEEecEEEeeCC
Q 047238 233 LSSQLRNR---IQGLFSYCLVREME----ATSVIKFGRDA-DVRRRDLETTPILLSDLRPHFYLHLLEISIGRHIVRFPP 304 (446)
Q Consensus 233 ~~~Ql~~~---~~~~Fs~~l~~~~~----~~g~l~fGg~d-~~~~g~l~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~ 304 (446)
++.+|.++ ..++||+||.++.. ..|.|+|||+| ++|.|++.|+|+.. ..+|.|.|++|+|+++.+...
T Consensus 186 ~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~~---~~~w~v~l~~i~v~~~~~~~~- 261 (383)
T 2x0b_A 186 IFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIK---TGVWQIQMKGVSVGSSTLLCE- 261 (383)
T ss_dssp HHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBSS---TTSCEEEECEEEESSCCCBST-
T ss_pred HHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcCC---CceEEEEEeEEEeCCceEEcC-
Confidence 33444433 37999999998533 38999999999 88999999999987 689999999999998764321
Q ss_pred CccccccCCCCcEEEeccCccccccchHHHHHHHHHHHHHhccCCCCCCCCCCCCCccccccCCCCCCcCeEEEEEcCeE
Q 047238 305 GAFDIMRDGTGGFIIDTGTPVTFIRNGPYQTLMQRYDQILRSLGRQRIPYNASQEFDYCYRYDSSFKAYPSMTFHLQEAD 384 (446)
Q Consensus 305 ~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~i~~~f~g~~ 384 (446)
+...+||||||+++++|++++++|.+++++.. .. ..+.++|+..+ .+|+|+|+|+|++
T Consensus 262 --------~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~------~~----g~~~v~C~~~~----~~P~i~f~~~g~~ 319 (383)
T 2x0b_A 262 --------DGCLALVDTGASYISGSTSSIEKLMEALGAKK------RL----FDYVVKCNEGP----TLPDISFHLGGKE 319 (383)
T ss_dssp --------TCEEEEECTTCSSEEECHHHHHHHHHHHTCEE------CS----SCEEEEGGGTT----TCCCEEEEETTEE
T ss_pred --------CCcEEEEcCCCceEEcCHHHHHHHHHHhCCcc------cC----CcEEEeccccc----cCceEEEEECCEE
Confidence 12579999999999999999999999986542 11 23458999876 8999999999999
Q ss_pred EEEcCCCeEEEEcCC--CceEEE-EEc------CCCceeechhhhceeEEEEECCCCEEEEEeCC
Q 047238 385 YIVQPENMYFIEPDR--GRFCVA-IQD------DPKYSILGAWQQQNMLIIYDLNVPALRFGSEN 440 (446)
Q Consensus 385 ~~l~~~~~y~~~~~~--~~~C~~-~~~------~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 440 (446)
|+||+++ |+++..+ +..|+. +.. .++.||||+.|||++|+|||++++|||||+++
T Consensus 320 ~~l~~~~-yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGfA~a~ 383 (383)
T 2x0b_A 320 YTLTSAD-YVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 383 (383)
T ss_dssp EEECHHH-HBCCCCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEECHHH-hEeeccCCCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEeEEEcC
Confidence 9999999 9988654 458984 653 23589999999999999999999999999874
No 4
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=6.1e-60 Score=466.44 Aligned_cols=313 Identities=21% Similarity=0.283 Sum_probs=258.6
Q ss_pred cccccce-ecCccEEEEEEECCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCccceecCCCCCCCCCCCC
Q 047238 85 DIHLPMA-KQDLFYSVEVNIGTPMKPQHLLFDTASSLVWTQCQPCIRCFDQTTPIFDPRASTTYSEIPCDDPLCRSPFKC 163 (446)
Q Consensus 85 ~~~~pl~-~~~~~Y~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~C 163 (446)
.+.+||. ..+.+|+++|.||||+|++.|+|||||+++||+|..|..+.|..++.|||++|+|++...
T Consensus 12 ~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~~------------ 79 (351)
T 1tzs_A 12 SAKEPLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPACKTHSRFQPSQSSTYSQPG------------ 79 (351)
T ss_dssp --CCTTGGGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCBCCS------------
T ss_pred ccceeceecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCccccCCCCcCCcccCcceEECC------------
Confidence 3457888 578999999999999999999999999999999999974444678999999999999987
Q ss_pred CCCCceeeeeeCCCceEEEEEEEEEEEeecCCCccccccEEEEeeecCCCCcCC--CCcceeEecCCCCCc------hhH
Q 047238 164 QNGKCVYTRRYHVGDVTRGLASRETFAFPVRNGFTFVPRLAFGCSNDNSGFAFG--GKISGILGFNASPLS------LSS 235 (446)
Q Consensus 164 ~~~~~~~~~~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~~fg~~~~~~~~~~~--~~~~GIlGLg~~~~s------~~~ 235 (446)
|.|.+.|++|+ +.|.+++|+|+|+ ++.++++.|||++...+ ..+ ...+||||||++..+ ++.
T Consensus 80 ----~~~~i~Yg~Gs-~~G~~~~D~v~ig----~~~~~~~~fg~~~~~~~-~~~~~~~~~GilGLg~~~~s~~~~~~~~~ 149 (351)
T 1tzs_A 80 ----QSFSIQYGTGS-LSGIIGADQVSVE----GLTVVGQQFGESVTEPG-QTFVDAEFDGILGLGYPSLAVGGVTPVFD 149 (351)
T ss_dssp ----CEEEEESSSCE-EEEEEEEEEEEET----TEEEEEEEEEEECSCCC-GGGGGCSCSEEEECSCGGGSGGGCCCHHH
T ss_pred ----CEEEEEeCCCC-eEEEEEEeEEEEC----CeEECCeEEEEEEeccc-cccccCCCceEEecCCccccccCCCcHHH
Confidence 88999999998 8999999999998 57899999999998766 433 378999999998765 445
Q ss_pred hhhhh---ccCceEEeeecCCC--CceeEEEccCC-ccCCCCceeeeeecCCCCCeEEEEeeeEEEecEEEeeCCCcccc
Q 047238 236 QLRNR---IQGLFSYCLVREME--ATSVIKFGRDA-DVRRRDLETTPILLSDLRPHFYLHLLEISIGRHIVRFPPGAFDI 309 (446)
Q Consensus 236 Ql~~~---~~~~Fs~~l~~~~~--~~g~l~fGg~d-~~~~g~l~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~ 309 (446)
||.++ ..++||+||.+... ..|.|+|||+| ++|.|++.|+|+.. ..+|.|.|++|+|+++.+....
T Consensus 150 ~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~~~v~l~~i~v~~~~~~~~~----- 221 (351)
T 1tzs_A 150 NMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVTK---QAYWQIALDNIQVGGTVMFCSE----- 221 (351)
T ss_dssp HHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECSE---ETTEEEEEEEEEETTEEEECTT-----
T ss_pred HHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecCC---CceEEEEeCEEEECCceEEcCC-----
Confidence 55543 47999999998533 38999999999 88999999999987 5899999999999998764222
Q ss_pred ccCCCCcEEEeccCccccccchHHHHHHHHHHHHHhccCCCCCCCCCCCCCccccccCCCCCCcCeEEEEEcCeEEEEcC
Q 047238 310 MRDGTGGFIIDTGTPVTFIRNGPYQTLMQRYDQILRSLGRQRIPYNASQEFDYCYRYDSSFKAYPSMTFHLQEADYIVQP 389 (446)
Q Consensus 310 ~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~i~~~f~g~~~~l~~ 389 (446)
...+||||||++++||++++++|.+++++... . ..+.++|+..+ .+|+|+|+|+|++|+||+
T Consensus 222 ----~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~---~-------g~~~~~C~~~~----~~P~i~f~f~g~~~~i~~ 283 (351)
T 1tzs_A 222 ----GCQAIVDTGTSLITGPSDKIKQLQNAIGAAPV---D-------GEYAVECANLN----VMPDVTFTINGVPYTLSP 283 (351)
T ss_dssp ----CEEEEECTTCSSEEECHHHHHHHHHHHTCEEC---S-------SSEEECGGGGG----GSCCEEEEETTEEEEECT
T ss_pred ----CceEEeccCCcceeCCHHHHHHHHHHhCCccc---C-------CeEEEeCCCCc----cCCcEEEEECCEEEEECH
Confidence 25699999999999999999999999865421 0 12347999875 789999999999999999
Q ss_pred CCeEEEEcCC--CceEEE-EEcC------CCceeechhhhceeEEEEECCCCEEEEEeCCCCCCCC
Q 047238 390 ENMYFIEPDR--GRFCVA-IQDD------PKYSILGAWQQQNMLIIYDLNVPALRFGSENCANGRQ 446 (446)
Q Consensus 390 ~~~y~~~~~~--~~~C~~-~~~~------~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~c~~~~~ 446 (446)
++ |+++... +..|+. +... .+.||||+.|||++|+|||++++|||||+++|....|
T Consensus 284 ~~-yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~~~s~~~ 348 (351)
T 1tzs_A 284 TA-YTLLDFVDGMQFCSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAVPWSHPQ 348 (351)
T ss_dssp TT-SEECC-----CCEEESEEECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC------
T ss_pred HH-hEeeccCCCCCeEEEEEEECCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEEECCcccchh
Confidence 99 9987653 457985 6532 3589999999999999999999999999999976543
No 5
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=3.1e-60 Score=465.52 Aligned_cols=305 Identities=18% Similarity=0.266 Sum_probs=262.2
Q ss_pred cccccceecCccEEEEEEECCCCceEEEEEEcCCCceeEeCC--CCCCC-------CCCCCCCCCCCCCCccceecCCCC
Q 047238 85 DIHLPMAKQDLFYSVEVNIGTPMKPQHLLFDTASSLVWTQCQ--PCIRC-------FDQTTPIFDPRASTTYSEIPCDDP 155 (446)
Q Consensus 85 ~~~~pl~~~~~~Y~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~~--~C~~C-------~~~~~~~f~~~~SsT~~~~~c~~~ 155 (446)
.+++||...+.+|+++|.||||+|++.|+|||||+++||+|. .|..| .|..++.|||++|+|++...
T Consensus 2 ~~~~~l~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~---- 77 (334)
T 1j71_A 2 DVPTTLINEGPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNLN---- 77 (334)
T ss_dssp CEEEEEEECSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEEE----
T ss_pred ceeEEEecCCcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcccCC----
Confidence 367889888999999999999999999999999999999976 67644 34678999999999999988
Q ss_pred CCCCCCCCCCCCceeeeeeCCCceEEEEEEEEEEEeecCCCccccccEEEEeeecCCCCcCCCCcceeEecCCCCC----
Q 047238 156 LCRSPFKCQNGKCVYTRRYHVGDVTRGLASRETFAFPVRNGFTFVPRLAFGCSNDNSGFAFGGKISGILGFNASPL---- 231 (446)
Q Consensus 156 ~C~~~~~C~~~~~~~~~~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~GIlGLg~~~~---- 231 (446)
|.|.+.|++|+.+.|.+++|+|+|+ ++.++++.|||++.... .+||||||++..
T Consensus 78 ------------~~~~i~Yg~Gs~~~G~~~~D~v~~g----~~~~~~~~fg~~~~~~~------~~GilGLg~~~~~~~~ 135 (334)
T 1j71_A 78 ------------QDFSIEYGDLTSSQGSFYKDTVGFG----GISIKNQQFADVTTTSV------DQGIMGIGFTADEAGY 135 (334)
T ss_dssp ------------EEEEEEBTTSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEESS------SSCEEECSCGGGSSTT
T ss_pred ------------CceEEEECCCCEEEEEEEEEEEEEC----CEEEccEEEEEEEecCC------CccEEEEcCCcccCcc
Confidence 8899999999878999999999999 57899999999997654 789999999765
Q ss_pred ----chhHhhhhh---ccCceEEeeecCCCCceeEEEccCC-ccCCCCceeeeeecCCCCCeEEEEeeeEEEecEEEeeC
Q 047238 232 ----SLSSQLRNR---IQGLFSYCLVREMEATSVIKFGRDA-DVRRRDLETTPILLSDLRPHFYLHLLEISIGRHIVRFP 303 (446)
Q Consensus 232 ----s~~~Ql~~~---~~~~Fs~~l~~~~~~~g~l~fGg~d-~~~~g~l~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~ 303 (446)
+++.||.++ .+++||+||.+.....|.|+|||+| ++|.|++.|+|+.. ..+|.|.+++|+|+++.+..+
T Consensus 136 ~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~~~v~l~~i~v~g~~~~~~ 212 (334)
T 1j71_A 136 NLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVTS---SVELRVHLGSINFDGTSVSTN 212 (334)
T ss_dssp CCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECCC---SSSCEEEEEEEEETTEEEEEE
T ss_pred ccCCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCceEEEEccC---CCeEEEEEeEEEECCEeccCC
Confidence 567777654 3689999999855678999999999 88999999999987 579999999999999887532
Q ss_pred CCccccccCCCCcEEEeccCccccccchHHHHHHHHHHHHHhccCCCCCCCCCCCCC-ccccccCCCCCCcCeEEEEE-c
Q 047238 304 PGAFDIMRDGTGGFIIDTGTPVTFIRNGPYQTLMQRYDQILRSLGRQRIPYNASQEF-DYCYRYDSSFKAYPSMTFHL-Q 381 (446)
Q Consensus 304 ~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-~~C~~~~~~~~~~p~i~~~f-~ 381 (446)
..+||||||++++||++++++|++++.+... ... ..+. ++|+ .+|.|+|+| +
T Consensus 213 -----------~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~----~~~----~~~~~~~C~-------~~p~i~f~f~~ 266 (334)
T 1j71_A 213 -----------ADVVLDSGTTITYFSQSTADKFARIVGATWD----SRN----EIYRLPSCD-------LSGDAVFNFDQ 266 (334)
T ss_dssp -----------EEEEECTTCSSEEECHHHHHHHHHHHTCEEE----TTT----TEEECSSSC-------CCSEEEEEEST
T ss_pred -----------ccEEEeCCCCcEecCHHHHHHHHHHcCCccc----CCC----ceEEEEcCC-------CCCceEEEEcC
Confidence 3599999999999999999999999976542 111 1234 7997 479999999 5
Q ss_pred CeEEEEcCCCeEEEEcCCCceEEEEEcCCCceeechhhhceeEEEEECCCCEEEEEeCCCCCCC
Q 047238 382 EADYIVQPENMYFIEPDRGRFCVAIQDDPKYSILGAWQQQNMLIIYDLNVPALRFGSENCANGR 445 (446)
Q Consensus 382 g~~~~l~~~~~y~~~~~~~~~C~~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~c~~~~ 445 (446)
|++++||+++ |+++..++..|+..+...+.||||+.|||++|+|||++++|||||+++|+++.
T Consensus 267 g~~~~i~~~~-y~~~~~~~~~C~~~i~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~~ 329 (334)
T 1j71_A 267 GVKITVPLSE-LILKDSDSSICYFGISRNDANILGDNFLRRAYIVYDLDDKTISLAQVKYTSSS 329 (334)
T ss_dssp TCEEEEEGGG-GEEECSSSSCEEESEEECTTCEECHHHHTTEEEEEETTTTEEEEEEECCCSCC
T ss_pred CcEEEECHHH-heeecCCCCeeEEEEeECCCcEEChHhhccEEEEEECCCCEEEEEecCCCCcc
Confidence 7999999999 99986555569875444467999999999999999999999999999998753
No 6
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=9.3e-60 Score=463.74 Aligned_cols=308 Identities=17% Similarity=0.273 Sum_probs=261.4
Q ss_pred cccccceecCccEEEEEEECCCCceEEEEEEcCCCceeEeCC--CCCCC-------CCCCCCCCCCCCCCccceecCCCC
Q 047238 85 DIHLPMAKQDLFYSVEVNIGTPMKPQHLLFDTASSLVWTQCQ--PCIRC-------FDQTTPIFDPRASTTYSEIPCDDP 155 (446)
Q Consensus 85 ~~~~pl~~~~~~Y~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~~--~C~~C-------~~~~~~~f~~~~SsT~~~~~c~~~ 155 (446)
.+++||...+.+|+++|.||||+|++.|+|||||+++||+|. .|..| .|..++.|||++|+|++...
T Consensus 2 ~v~~~l~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~---- 77 (342)
T 2qzx_A 2 PVAVTLHNEAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQNLN---- 77 (342)
T ss_dssp CEEEEEEECSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEEEE----
T ss_pred ceeEEEecCCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCcccCC----
Confidence 366788888999999999999999999999999999999876 67643 34678899999999999988
Q ss_pred CCCCCCCCCCCCceeeeeeCCCceEEEEEEEEEEEeecCCCccccccEEEEeeecCCCCcCCCCcceeEecCCCCC----
Q 047238 156 LCRSPFKCQNGKCVYTRRYHVGDVTRGLASRETFAFPVRNGFTFVPRLAFGCSNDNSGFAFGGKISGILGFNASPL---- 231 (446)
Q Consensus 156 ~C~~~~~C~~~~~~~~~~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~GIlGLg~~~~---- 231 (446)
|.|.+.|++|+.+.|.+++|+|+|+ ++.++++.|||++.... .+||||||++..
T Consensus 78 ------------~~~~i~Yg~Gs~~~G~~~~D~v~~g----~~~v~~~~fg~~~~~~~------~~GilGLg~~~~~~~~ 135 (342)
T 2qzx_A 78 ------------TRFDIKYGDGSYAKGKLYKDTVGIG----GVSVRDQLFANVWSTSA------RKGILGIGFQSGEATE 135 (342)
T ss_dssp ------------EEEEEECTTSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEECS------SSCEEECSCGGGCSSS
T ss_pred ------------CcEEEEeCCCCeEEEEEEEEEEEEC----CEEecceEEEEEEecCC------CcCEEEEccccccCCC
Confidence 8899999999978999999999999 57899999999998654 789999999764
Q ss_pred ----chhHhhhhh---ccCceEEeeecCCCCceeEEEccCC-ccCCCCceeeeeecCCCCCeEEEEeeeEEEecEEEeeC
Q 047238 232 ----SLSSQLRNR---IQGLFSYCLVREMEATSVIKFGRDA-DVRRRDLETTPILLSDLRPHFYLHLLEISIGRHIVRFP 303 (446)
Q Consensus 232 ----s~~~Ql~~~---~~~~Fs~~l~~~~~~~g~l~fGg~d-~~~~g~l~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~ 303 (446)
+++.||.++ .+++||+||.+.....|.|+|||+| ++|.|++.|+|+.. ..+|.|.|++|+|+++.+..+
T Consensus 136 ~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~~~v~l~~i~v~g~~~~~~ 212 (342)
T 2qzx_A 136 FDYDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGSLVDLPITS---EKKLTVGLRSVNVRGRNVDAN 212 (342)
T ss_dssp SCCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCC---SSSCEEEEEEEEETTEEEEEE
T ss_pred ccCccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecceEEEeccC---CceEEEEEeEEEECCEecCCC
Confidence 567777654 3689999999855678999999999 88999999999988 569999999999999887532
Q ss_pred CCccccccCCCCcEEEeccCccccccchHHHHHHHHHHHHHhccCCCCCCCCCCCCCccccccCCCCCCcCeEEEEE-cC
Q 047238 304 PGAFDIMRDGTGGFIIDTGTPVTFIRNGPYQTLMQRYDQILRSLGRQRIPYNASQEFDYCYRYDSSFKAYPSMTFHL-QE 382 (446)
Q Consensus 304 ~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~i~~~f-~g 382 (446)
..+||||||++++||++++++|++++.+......... ..+.++|+ .+|.|+|+| +|
T Consensus 213 -----------~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~~~~~~-----~~~~~~C~-------~~p~i~f~f~~g 269 (342)
T 2qzx_A 213 -----------TNVLLDSGTTISYFTRSIVRNILYAIGAQMKFDSAGN-----KVYVADCK-------TSGTIDFQFGNN 269 (342)
T ss_dssp -----------EEEEECTTCSSEEECHHHHHHHHHHHTCEEEECTTSC-----EEEEECTT-------CCCEEEEEETTT
T ss_pred -----------cCEEEeCCCCCEEcCHHHHHHHHHHhCCeeeeccCCC-----cEEEEECC-------CCCcEEEEECCC
Confidence 3599999999999999999999999976643211101 12347897 479999999 57
Q ss_pred eEEEEcCCCeEEEEcC----C-CceEEEEEcCCCceeechhhhceeEEEEECCCCEEEEEeCCCCCCC
Q 047238 383 ADYIVQPENMYFIEPD----R-GRFCVAIQDDPKYSILGAWQQQNMLIIYDLNVPALRFGSENCANGR 445 (446)
Q Consensus 383 ~~~~l~~~~~y~~~~~----~-~~~C~~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~c~~~~ 445 (446)
++++||+++ |+++.. + +..|+..+...+.||||+.|||++|+|||++++|||||+++|+++.
T Consensus 270 ~~~~i~~~~-~~~~~~~~~~~~~~~C~~~i~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~~ 336 (342)
T 2qzx_A 270 LKISVPVSE-FLFQTYYTSGKPFPKCEVRIRESEDNILGDNFLRSAYVVYNLDDKKISMAPVKYTSES 336 (342)
T ss_dssp EEEEEEGGG-GEECCBCTTSCBCSSEEESEEECSSCEECHHHHTTEEEEEETTTTEEEEEEBCCCSCC
T ss_pred cEEEEcHHH-hcccccccCCCCCCccEEEEecCCCcEeChHhhhcEEEEEECCCCEEEEEeeCCCCCC
Confidence 999999999 998742 2 4679875444467999999999999999999999999999998653
No 7
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=2.2e-59 Score=457.67 Aligned_cols=303 Identities=22% Similarity=0.348 Sum_probs=259.3
Q ss_pred ccccce-ecCccEEEEEEECCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCccceecCCCCCCCCCCCCC
Q 047238 86 IHLPMA-KQDLFYSVEVNIGTPMKPQHLLFDTASSLVWTQCQPCIRCFDQTTPIFDPRASTTYSEIPCDDPLCRSPFKCQ 164 (446)
Q Consensus 86 ~~~pl~-~~~~~Y~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~C~ 164 (446)
+.+||. ..+.+|+++|.||||+|++.|+|||||+++||+|..|..+.|..++.|||++|+|++...
T Consensus 2 ~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~~~y~~~~SsT~~~~~------------- 68 (324)
T 1am5_A 2 VTEQMKNEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQACSNHNKFKPRQSSTYVETG------------- 68 (324)
T ss_dssp EEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCCSHHHHTSCCBCGGGCTTCEEEE-------------
T ss_pred ceeeeecCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccccCCCcCCCccCCCeEeCC-------------
Confidence 357888 688999999999999999999999999999999999975334678899999999999988
Q ss_pred CCCceeeeeeCCCceEEEEEEEEEEEeecCCCccccccEEEEeeecCCCCcCC--CCcceeEecCCCCCc------hhHh
Q 047238 165 NGKCVYTRRYHVGDVTRGLASRETFAFPVRNGFTFVPRLAFGCSNDNSGFAFG--GKISGILGFNASPLS------LSSQ 236 (446)
Q Consensus 165 ~~~~~~~~~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~~fg~~~~~~~~~~~--~~~~GIlGLg~~~~s------~~~Q 236 (446)
|.|.+.|++|+ +.|.+++|+|+|+ ++.++++.|||++...+ ..+ ...+||||||++..+ ++.+
T Consensus 69 ---~~~~i~Yg~Gs-~~G~~~~D~v~~g----~~~~~~~~fg~~~~~~~-~~~~~~~~~GilGLg~~~~s~~~~~~~~~~ 139 (324)
T 1am5_A 69 ---KTVDLTYGTGG-MRGILGQDTVSVG----GGSDPNQELGESQTEPG-PFQAAAPFDGILGLAYPSIAAAGAVPVFDN 139 (324)
T ss_dssp ---EEEEEECSSCE-EEEEEEEEEEESS----SSCEEEEEEEEEEECCS-TTTTTCSSSEEEECSCGGGCGGGCCCHHHH
T ss_pred ---cEEEEEECCCC-eEEEEEECceeEC----CcEEcccEEEEEEeccc-ccccCCCCceEEecCCccccccCCCchHHh
Confidence 88999999998 6999999999999 57889999999998766 433 378999999998765 4455
Q ss_pred hhhh---ccCceEEeeecCCCCceeEEEccCC-ccCCCCceeeeeecCCCCCeEEEEeeeEEEecEEEeeCCCccccccC
Q 047238 237 LRNR---IQGLFSYCLVREMEATSVIKFGRDA-DVRRRDLETTPILLSDLRPHFYLHLLEISIGRHIVRFPPGAFDIMRD 312 (446)
Q Consensus 237 l~~~---~~~~Fs~~l~~~~~~~g~l~fGg~d-~~~~g~l~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~ 312 (446)
|.++ ..++||+||.+.+...|.|+|||+| +++.|++.|+|+.. ..+|.|.+++|+|+++.+...
T Consensus 140 l~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~~~v~l~~i~v~~~~~~~~--------- 207 (324)
T 1am5_A 140 MGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVTA---EKYWQVALDGITVNGQTAACE--------- 207 (324)
T ss_dssp HHHTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEEE---ETTEEEEECEEEETTEECCCC---------
T ss_pred HHhcCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCceEEEecCC---CcEEEEEEeEEEECCceeecc---------
Confidence 5543 4789999999865568999999999 88999999999987 589999999999999875321
Q ss_pred CCCcEEEeccCccccccchHHHHHHHHHHHHHhccCCCCCCCCCCCCCccccccCCCCCCcCeEEEEEcCeEEEEcCCCe
Q 047238 313 GTGGFIIDTGTPVTFIRNGPYQTLMQRYDQILRSLGRQRIPYNASQEFDYCYRYDSSFKAYPSMTFHLQEADYIVQPENM 392 (446)
Q Consensus 313 ~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~i~~~f~g~~~~l~~~~~ 392 (446)
+ ..+||||||++++||++++++|.+++++. . .. ..+.++|+..+ .+|+|+|+|+|++++||+++
T Consensus 208 ~-~~aiiDSGTt~~~lp~~~~~~l~~~~~~~-~-----~~----g~~~~~C~~~~----~~P~i~f~f~g~~~~i~~~~- 271 (324)
T 1am5_A 208 G-CQAIVDTGTSKIVAPVSALANIMKDIGAS-E-----NQ----GEMMGNCASVQ----SLPDITFTINGVKQPLPPSA- 271 (324)
T ss_dssp C-EEEEECTTCSSEEECTTTHHHHHHHHTCE-E-----CC----CCEECCTTSSS----SSCCEEEEETTEEEEECHHH-
T ss_pred C-ceEEEecCCccEECCHHHHHHHHHHhCCc-c-----cC----CcEEEeCCCcc----cCCcEEEEECCEEEEECHHH-
Confidence 1 46999999999999999999999998654 1 11 22458999875 79999999999999999999
Q ss_pred EEEEcCCCceEEE-EEcC------CCceeechhhhceeEEEEECCCCEEEEEeCC
Q 047238 393 YFIEPDRGRFCVA-IQDD------PKYSILGAWQQQNMLIIYDLNVPALRFGSEN 440 (446)
Q Consensus 393 y~~~~~~~~~C~~-~~~~------~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 440 (446)
|+++. +..|+. +... ++.||||+.|||++|+|||++++|||||+++
T Consensus 272 y~~~~--~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 272 YIEGD--QAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp HEEES--SSCEEECEEECCSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred hcccC--CCeEEEEEEECccCCCCCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 99986 567984 6542 3579999999999999999999999999975
No 8
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=1.9e-59 Score=457.77 Aligned_cols=304 Identities=22% Similarity=0.328 Sum_probs=257.5
Q ss_pred ccccce-ecCccEEEEEEECCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCccceecCCCCCCCCCCCCC
Q 047238 86 IHLPMA-KQDLFYSVEVNIGTPMKPQHLLFDTASSLVWTQCQPCIRCFDQTTPIFDPRASTTYSEIPCDDPLCRSPFKCQ 164 (446)
Q Consensus 86 ~~~pl~-~~~~~Y~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~C~ 164 (446)
..+||. ..+.+|+++|.||||+|++.|+|||||+++||+|..|....|..++.|||++|+|++...
T Consensus 4 ~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~~~y~~~~SsT~~~~~------------- 70 (323)
T 3cms_A 4 ASVPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACKNHQRFDPRKSSTFQNLG------------- 70 (323)
T ss_dssp EEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEEE-------------
T ss_pred ceeeeEeccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCCcccccCCCCCCCccCCCeEECC-------------
Confidence 347888 578999999999999999999999999999999999943223578899999999999988
Q ss_pred CCCceeeeeeCCCceEEEEEEEEEEEeecCCCccccccEEEEeeecCCCCcCC--CCcceeEecCCCCCc------hhHh
Q 047238 165 NGKCVYTRRYHVGDVTRGLASRETFAFPVRNGFTFVPRLAFGCSNDNSGFAFG--GKISGILGFNASPLS------LSSQ 236 (446)
Q Consensus 165 ~~~~~~~~~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~~fg~~~~~~~~~~~--~~~~GIlGLg~~~~s------~~~Q 236 (446)
|.|.+.|++|+ +.|.+++|+|+|+ ++.++++.|||++...+ ..+ ...+||||||++..+ ++.+
T Consensus 71 ---~~~~i~Yg~Gs-~~G~~~~D~v~ig----~~~~~~~~fg~~~~~~~-~~~~~~~~~GilGLg~~~~s~~~~~~~~~~ 141 (323)
T 3cms_A 71 ---KPLSIHYGTGS-MQGILGYDTVTVS----NIVDIQQTVGLSTQEPG-DFFTYAEFDGILGMAYPSLASEYSIPVFDN 141 (323)
T ss_dssp ---EEEEEEETTEE-EEEEEEEEEEEET----TEEEEEEEEEEEEECCS-HHHHHSSCSEEEECSCGGGSCTTCCCHHHH
T ss_pred ---cEEEEEeCCCC-eEEEEEEEEEEEC----CeEEeccEEEEEEeccc-ccccccCCceEEecCcchhhccCCCCHHHH
Confidence 88999999998 8999999999998 57899999999998765 323 368999999998755 4455
Q ss_pred hhhh---ccCceEEeeecCCCCceeEEEccCC-ccCCCCceeeeeecCCCCCeEEEEeeeEEEecEEEeeCCCccccccC
Q 047238 237 LRNR---IQGLFSYCLVREMEATSVIKFGRDA-DVRRRDLETTPILLSDLRPHFYLHLLEISIGRHIVRFPPGAFDIMRD 312 (446)
Q Consensus 237 l~~~---~~~~Fs~~l~~~~~~~g~l~fGg~d-~~~~g~l~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~ 312 (446)
|.++ ..++||+||.+.+. .|.|+|||+| +++.|++.|+|+.. ..+|.|.+++|+|+++.+..+..
T Consensus 142 l~~q~~i~~~~FS~~l~~~~~-~G~l~fGg~d~~~~~g~l~~~p~~~---~~~~~v~l~~i~v~~~~~~~~~~------- 210 (323)
T 3cms_A 142 MMNRHLVAQDLFSVYMDRNGQ-ESMLTLGAIDPSYYTGSLHWVPVTV---QQYWQFTVDSVTISGVVVACEGG------- 210 (323)
T ss_dssp HHHTTCSSSSEEEEECCTTSS-CEEEEESCCCGGGEEEEEEEEECSS---BTTBEEEEEEEEETTEEEESTTC-------
T ss_pred HHHCCCCCCCEEEEEECCCCC-CEEEEECCCChhhccCceEEEECcc---CCeEEEEEeeEEECCEEeecCCC-------
Confidence 5543 37999999998533 3999999999 88999999999987 58999999999999988764332
Q ss_pred CCCcEEEeccCccccccchHHHHHHHHHHHHHhccCCCCCCCCCCCCCccccccCCCCCCcCeEEEEEcCeEEEEcCCCe
Q 047238 313 GTGGFIIDTGTPVTFIRNGPYQTLMQRYDQILRSLGRQRIPYNASQEFDYCYRYDSSFKAYPSMTFHLQEADYIVQPENM 392 (446)
Q Consensus 313 ~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~i~~~f~g~~~~l~~~~~ 392 (446)
..+||||||++++||++++++|.+++++... .. ..+.++|+..+ .+|+|+|+|+|++++||+++
T Consensus 211 --~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~-----~~----g~~~~~C~~~~----~~P~i~f~f~g~~~~i~~~~- 274 (323)
T 3cms_A 211 --CQAILDTGTSKLVGPSSDILNIQQAIGATQN-----QY----GEFDIDCDNLS----YMPTVVFEINGKMYPLTPSA- 274 (323)
T ss_dssp --EEEEECTTCCSEEECHHHHHHHHHHHTCEEE-----TT----TEEEECTTCTT----TSCCEEEEETTEEEEECHHH-
T ss_pred --cEEEEecCCccEeCCHHHHHHHHHHhCCeec-----CC----CcEEEECCCCc----cCceEEEEECCEEEEECHHH-
Confidence 5699999999999999999999999865311 11 22347999765 79999999999999999999
Q ss_pred EEEEcCCCceEEE-EEcC--CCceeechhhhceeEEEEECCCCEEEEEeCC
Q 047238 393 YFIEPDRGRFCVA-IQDD--PKYSILGAWQQQNMLIIYDLNVPALRFGSEN 440 (446)
Q Consensus 393 y~~~~~~~~~C~~-~~~~--~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 440 (446)
|+++ .+..|+. +... ++.||||+.|||++|+|||++++|||||+++
T Consensus 275 y~~~--~~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 275 YTSQ--DQGFCTSGFQSENHSQKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp HEEE--ETTEEEESEEEC---CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred hccC--CCCEEEEEEEeCCCCCcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 9998 4567985 6553 4689999999999999999999999999875
No 9
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=1.2e-58 Score=465.34 Aligned_cols=336 Identities=22% Similarity=0.386 Sum_probs=264.1
Q ss_pred cccccce--ecCccEEEEEEECCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCccceecCCCCCCCC-C-
Q 047238 85 DIHLPMA--KQDLFYSVEVNIGTPMKPQHLLFDTASSLVWTQCQPCIRCFDQTTPIFDPRASTTYSEIPCDDPLCRS-P- 160 (446)
Q Consensus 85 ~~~~pl~--~~~~~Y~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~-~- 160 (446)
.+.+||. ..+++|+++|.||||+|++.|+|||||+++||+|..| .+|+|++.+.|.++.|.. .
T Consensus 9 ~~~~pl~~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~-------------~~Sst~~~~~C~s~~C~~~~~ 75 (403)
T 3aup_A 9 LVVLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQ-------------YSSKTYQAPFCHSTQCSRANT 75 (403)
T ss_dssp CEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSC-------------CCCSSCBCCCTTBHHHHHTTC
T ss_pred cEEEeeecCCCCceEEEEEECCCCCceeEEEEECCCCceeECCCCC-------------CCCCCCCccCCCCccccCccc
Confidence 4678888 3789999999999999999999999999999998764 478999999998877754 1
Q ss_pred -----------CCCCCCCceeeeeeC-CCceEEEEEEEEEEEeecCCCc-------cccccEEEEeeecCCCCc-C-CCC
Q 047238 161 -----------FKCQNGKCVYTRRYH-VGDVTRGLASRETFAFPVRNGF-------TFVPRLAFGCSNDNSGFA-F-GGK 219 (446)
Q Consensus 161 -----------~~C~~~~~~~~~~Y~-~g~~~~G~~~~D~v~l~~~~~~-------~~~~~~~fg~~~~~~~~~-~-~~~ 219 (446)
..|.++.|.|.+.|+ +|+.+.|.+++|+|+|++.++. +.++++.|||++.... . + ...
T Consensus 76 ~~c~~c~~~~~s~~~~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~-~~~~~~~ 154 (403)
T 3aup_A 76 HQCLSCPAASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLV-QKGLPRN 154 (403)
T ss_dssp CCEEECSSSCBTTBCSSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGG-SSSSSTT
T ss_pred cCccccCCCCCCCCCCCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCccccc-ccCCCCC
Confidence 235556899999998 7888999999999999964322 6889999999998643 2 2 237
Q ss_pred cceeEecCCCCCchhHhhhhh--ccCceEEeeecCCCCceeEEEccCC-ccC--C-C-----CceeeeeecCCCCCeEEE
Q 047238 220 ISGILGFNASPLSLSSQLRNR--IQGLFSYCLVREMEATSVIKFGRDA-DVR--R-R-----DLETTPILLSDLRPHFYL 288 (446)
Q Consensus 220 ~~GIlGLg~~~~s~~~Ql~~~--~~~~Fs~~l~~~~~~~g~l~fGg~d-~~~--~-g-----~l~~~p~~~~~~~~~w~v 288 (446)
.+||||||++..++++|++.. ..++||+||.+.....|.|+||| | .+| . | ++.|+|++.++ ..+|.|
T Consensus 155 ~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~-~~~y~v 232 (403)
T 3aup_A 155 TQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITL-QGEYNV 232 (403)
T ss_dssp CCEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECT-TSCEEE
T ss_pred CceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECC-CchhccccccccccCceeecccccCC-CCcceE
Confidence 899999999999999998753 46899999998656789999999 8 777 4 5 99999999854 379999
Q ss_pred EeeeEEEecEEE-eeCCCccccccCCCCcEEEeccCccccccchHHHHHHHHHHHHHh-ccCCCCCCCCCCCCCcccccc
Q 047238 289 HLLEISIGRHIV-RFPPGAFDIMRDGTGGFIIDTGTPVTFIRNGPYQTLMQRYDQILR-SLGRQRIPYNASQEFDYCYRY 366 (446)
Q Consensus 289 ~l~~i~v~~~~~-~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~~C~~~ 366 (446)
.|++|+||++.+ .++...+.++..+.+++||||||++++||+++|++|++++.+.+. .+...... .....++|...
T Consensus 233 ~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~--~~~~c~~c~~~ 310 (403)
T 3aup_A 233 RVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVA--PFGLCFNSNKI 310 (403)
T ss_dssp CEEEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEECCCT--TCSCEECGGGC
T ss_pred EEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccccCCCC--CCCceEECCCc
Confidence 999999999988 666666666556667899999999999999999999999977653 22211110 01122566554
Q ss_pred CCCCCCcCeEEEEEcCe---EEEEcCCCeEEEEcCCCceEEEEEcCC----CceeechhhhceeEEEEECCCCEEEE---
Q 047238 367 DSSFKAYPSMTFHLQEA---DYIVQPENMYFIEPDRGRFCVAIQDDP----KYSILGAWQQQNMLIIYDLNVPALRF--- 436 (446)
Q Consensus 367 ~~~~~~~p~i~~~f~g~---~~~l~~~~~y~~~~~~~~~C~~~~~~~----~~~ilG~~fl~~~y~vfD~~~~riGf--- 436 (446)
+ .+|+|+|+|+|. +|+|++++ |+++..++..|++++..+ +.||||+.|||++|+|||++++||||
T Consensus 311 ~----~~P~i~f~f~g~~~~~~~l~~~~-y~~~~~~~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGf~A~ 385 (403)
T 3aup_A 311 N----AYPSVDLVMDKPNGPVWRISGED-LMVQAQPGVTCLGVMNGGMQPRAEITLGARQLEENLVVFDLARSRVGFSTS 385 (403)
T ss_dssp C----CCCCEEEEESSTTCCEEEECHHH-HEEEC---CEEECEEECCSCCSSSEEECHHHHTTSCEEEETTTTEEEEESS
T ss_pred C----cCCcEEEEEcCCCceEEEEcccc-eEEEcCCCeEEEEEEcCCCCCCCcEEEChHHhcCeEEEEECCCCEEEEecc
Confidence 3 789999999974 99999999 999876567899887643 47999999999999999999999999
Q ss_pred ----EeCCCCC
Q 047238 437 ----GSENCAN 443 (446)
Q Consensus 437 ----a~~~c~~ 443 (446)
++++|++
T Consensus 386 ~~~~~~~~C~~ 396 (403)
T 3aup_A 386 SLHSHGVKCAD 396 (403)
T ss_dssp CGGGGTCCGGG
T ss_pred cccccCCCccc
Confidence 5677765
No 10
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=1.1e-58 Score=459.30 Aligned_cols=318 Identities=19% Similarity=0.193 Sum_probs=265.2
Q ss_pred cccccccce-ecCccEEEEEEECCCCceEEEEEEcCCCceeEeCCCCC-CCCCCCCCCCCCCCCCccceecCCCCCCCCC
Q 047238 83 LEDIHLPMA-KQDLFYSVEVNIGTPMKPQHLLFDTASSLVWTQCQPCI-RCFDQTTPIFDPRASTTYSEIPCDDPLCRSP 160 (446)
Q Consensus 83 ~~~~~~pl~-~~~~~Y~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~~~C~-~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~ 160 (446)
++...+||. ..+.+|+++|.||||+|++.|+|||||+++||+|..|. ...|..++.|||++|+|++...
T Consensus 5 g~~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~--------- 75 (361)
T 1mpp_A 5 GSVDTPGLYDFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGKRFFDPSSSSTFKETD--------- 75 (361)
T ss_dssp CCEEEEEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCSSCCBCGGGCTTCEEEE---------
T ss_pred CccceEEeecCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCCCCcCCCccCCceEecC---------
Confidence 445668888 47899999999999999999999999999999999998 3233678999999999999988
Q ss_pred CCCCCCCceeeeeeCCCceEEEEEEEEEEEeecCCCccccccEEEEeeecCCC-----CcC-CCCcceeEecCCCCCch-
Q 047238 161 FKCQNGKCVYTRRYHVGDVTRGLASRETFAFPVRNGFTFVPRLAFGCSNDNSG-----FAF-GGKISGILGFNASPLSL- 233 (446)
Q Consensus 161 ~~C~~~~~~~~~~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~~fg~~~~~~~-----~~~-~~~~~GIlGLg~~~~s~- 233 (446)
|.|.+.|++|+ +.|.+++|+|+|+ ++.++++.|||++...+ ..+ ....+||||||++..+.
T Consensus 76 -------~~~~i~Yg~Gs-~~G~~~~D~v~~g----~~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~~~~s~~ 143 (361)
T 1mpp_A 76 -------YNLNITYGTGG-ANGIYFRDSITVG----GATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNTAM 143 (361)
T ss_dssp -------EEEEEECSSCE-EEEEEEEEEEEET----TEEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGGGSHH
T ss_pred -------CeEEEEECCce-EEEEEEEEEEEEC----CEEEeceEEEEEEeccCccccccccccCCCCCEEEeCCcccccc
Confidence 88999999999 8999999999999 57899999999997643 011 23789999999986654
Q ss_pred -----------hHhhhhh---ccCceEEeeecCCCCceeEEEccCC-ccCCCCceeeeeecCCCC-CeEEEEeeeEEEec
Q 047238 234 -----------SSQLRNR---IQGLFSYCLVREMEATSVIKFGRDA-DVRRRDLETTPILLSDLR-PHFYLHLLEISIGR 297 (446)
Q Consensus 234 -----------~~Ql~~~---~~~~Fs~~l~~~~~~~g~l~fGg~d-~~~~g~l~~~p~~~~~~~-~~w~v~l~~i~v~~ 297 (446)
+.||.++ ..++||+||.+. ...|.|+|||+| +++.|++.|+|+...... .+|.|.|++|+|++
T Consensus 144 ~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l~~i~v~~ 222 (361)
T 1mpp_A 144 EAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTN-DGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVTGVKIDG 222 (361)
T ss_dssp HHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCS-SSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEEEEEETT
T ss_pred cccccccCCCHHHHHHHcCCCCCcEEEEEecCC-CCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEEEeEEEECC
Confidence 3455443 479999999985 468999999999 889999999999984311 29999999999999
Q ss_pred EEEeeCCCccccccCCCCcEE-EeccCccccccchHHHHHHHHHHHHHhccCCCCCCCCCCCCCccccccCCCCCCc-Ce
Q 047238 298 HIVRFPPGAFDIMRDGTGGFI-IDTGTPVTFIRNGPYQTLMQRYDQILRSLGRQRIPYNASQEFDYCYRYDSSFKAY-PS 375 (446)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~i-iDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~-p~ 375 (446)
+.+..+. ...+| |||||++++||++++++|++++.+.... .. ..+.++|+..+ .+ |+
T Consensus 223 ~~~~~~~---------~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~~----~~----g~~~~~C~~~~----~~~p~ 281 (361)
T 1mpp_A 223 SDAVSFD---------GAQAFTIDTGTNFFIAPSSFAEKVVKAALPDATE----SQ----QGYTVPCSKYQ----DSKTT 281 (361)
T ss_dssp EEEEEEE---------EEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCEE----ET----TEEEEEHHHHT----TCCCE
T ss_pred eeeccCC---------CCEEEEECCCCCceeCCHHHHHHHHHHhCCcccC----CC----CcEEEECCCcc----cCCCc
Confidence 8774321 14699 9999999999999999999999664211 11 22348999865 67 99
Q ss_pred EEEEE--c-----CeEEEEcCCCeEEEEcCC-CceEE-EEEc-CCCceeechhhhceeEEEEECCCCEEEEEeCCCCCC
Q 047238 376 MTFHL--Q-----EADYIVQPENMYFIEPDR-GRFCV-AIQD-DPKYSILGAWQQQNMLIIYDLNVPALRFGSENCANG 444 (446)
Q Consensus 376 i~~~f--~-----g~~~~l~~~~~y~~~~~~-~~~C~-~~~~-~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~c~~~ 444 (446)
|+|+| + |++|+||+++ |+++... +..|+ ++.+ ..+.||||++|||++|+|||++++|||||+++|+.+
T Consensus 282 i~f~f~~g~~~~~g~~~~i~~~~-y~~~~~~~~~~C~~~i~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~~~~~ 359 (361)
T 1mpp_A 282 FSLVLQKSGSSSDTIDVSVPISK-MLLPVDKSGETCMFIVLPDGGNQFIVGNLFLRFFVNVYDFGKNRIGFAPLASGYE 359 (361)
T ss_dssp EEEEEECTTCSSCEEEEEEEGGG-GEEECSSSSCEEEESEEEESSSCCEEEHHHHTTEEEEEETTTTEEEEEEBCTTTC
T ss_pred EEEEEEcCCcCCCCeEEEECHHH-hEEecCCCCCeeEEEEEeCCCCCEEEChHHhccEEEEEECCCCEEEEEEcccCCC
Confidence 99999 7 8999999999 9998753 56897 5665 346899999999999999999999999999999865
No 11
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=5.6e-59 Score=455.76 Aligned_cols=305 Identities=24% Similarity=0.372 Sum_probs=258.4
Q ss_pred cccceecCccEEEEEEECCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCccceecCCCCCCCCCCCCCCC
Q 047238 87 HLPMAKQDLFYSVEVNIGTPMKPQHLLFDTASSLVWTQCQPCIRCFDQTTPIFDPRASTTYSEIPCDDPLCRSPFKCQNG 166 (446)
Q Consensus 87 ~~pl~~~~~~Y~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~C~~~ 166 (446)
.+||...+.+|+++|.||||+|++.|+|||||+++||+|..|..+.|..++.|||++|+|++...
T Consensus 4 ~~~l~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~~--------------- 68 (329)
T 1htr_B 4 YEPMAYMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTSHSRFNPSESSTYSTNG--------------- 68 (329)
T ss_dssp CCGGGGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEEE---------------
T ss_pred eeeeEEcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCCcccCCCCcCCCccCCCeEECC---------------
Confidence 46777788899999999999999999999999999999999975333668999999999999988
Q ss_pred CceeeeeeCCCceEEEEEEEEEEEeecCCCccccccEEEEeeecCCCCcCC--CCcceeEecCCCCCc------hhHhhh
Q 047238 167 KCVYTRRYHVGDVTRGLASRETFAFPVRNGFTFVPRLAFGCSNDNSGFAFG--GKISGILGFNASPLS------LSSQLR 238 (446)
Q Consensus 167 ~~~~~~~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~~fg~~~~~~~~~~~--~~~~GIlGLg~~~~s------~~~Ql~ 238 (446)
|.|.+.|++|+ +.|.+++|+|+|+ ++.++++.|||++...+ ..+ ...+||||||++..+ +++||.
T Consensus 69 -~~~~i~Yg~gs-~~G~~~~D~v~~g----~~~~~~~~fg~~~~~~~-~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~ 141 (329)
T 1htr_B 69 -QTFSLQYGSGS-LTGFFGYDTLTVQ----SIQVPNQEFGLSENEPG-TNFVYAQFDGIMGLAYPALSVDEATTAMQGMV 141 (329)
T ss_dssp -EEEEEEETTEE-EEEEEEEEEEEET----TEEEEEEEEEEESSCSS-GGGGGCSCCEEEECCCCSCCCTTCCSHHHHHH
T ss_pred -cEEEEEeCCCC-eEEEEEeeeEEEc----ceEECceEEEEEEEccc-cccccCCCceEEecCCCcccccCCCCHHHHHH
Confidence 88999999999 6999999999998 57899999999998765 433 378999999998765 455555
Q ss_pred hh---ccCceEEeeecCCCC-ceeEEEccCC-ccCCCCceeeeeecCCCCCeEEEEeeeEEEecEEEeeCCCccccccCC
Q 047238 239 NR---IQGLFSYCLVREMEA-TSVIKFGRDA-DVRRRDLETTPILLSDLRPHFYLHLLEISIGRHIVRFPPGAFDIMRDG 313 (446)
Q Consensus 239 ~~---~~~~Fs~~l~~~~~~-~g~l~fGg~d-~~~~g~l~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~ 313 (446)
++ ..++||+||.+.... .|.|+|||+| ++|.|++.|+|+.. ..+|.|.+++|+|+++.+.... .
T Consensus 142 ~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~~~v~l~~i~v~~~~~~~~~--------~ 210 (329)
T 1htr_B 142 QEGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVTQ---ELYWQIGIEEFLIGGQASGWCS--------E 210 (329)
T ss_dssp HTTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBCS---SSSCEEEECEEEETTEECCTTT--------T
T ss_pred hcCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECCC---CceEEEEEeEEEECCceeeecC--------C
Confidence 43 478999999985433 8999999999 88999999999987 6899999999999998754111 1
Q ss_pred CCcEEEeccCccccccchHHHHHHHHHHHHHhccCCCCCCCCCCCCCccccccCCCCCCcCeEEEEEcCeEEEEcCCCeE
Q 047238 314 TGGFIIDTGTPVTFIRNGPYQTLMQRYDQILRSLGRQRIPYNASQEFDYCYRYDSSFKAYPSMTFHLQEADYIVQPENMY 393 (446)
Q Consensus 314 ~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~i~~~f~g~~~~l~~~~~y 393 (446)
...+||||||++++||++++++|.+++++... .. ..+.++|+..+ .+|+|+|+|+|++|+||+++ |
T Consensus 211 ~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~~~-----~~----g~~~~~C~~~~----~~P~i~f~f~g~~~~i~~~~-y 276 (329)
T 1htr_B 211 GCQAIVDTGTSLLTVPQQYMSALLQATGAQED-----EY----GQFLVNCNSIQ----NLPSLTFIINGVEFPLPPSS-Y 276 (329)
T ss_dssp CEEEEECTTCCSEEEEGGGHHHHHHHHTCEEC-----TT----SCEEECGGGGG----GSCCEEEEETTEEEEECHHH-H
T ss_pred CceEEEecCCccEECCHHHHHHHHHHhCCeec-----CC----CeEEEeCCCcc----cCCcEEEEECCEEEEECHHH-h
Confidence 25799999999999999999999999865421 11 22448999875 78999999999999999999 9
Q ss_pred EEEcCCCceEEE-EEcC------CC-ceeechhhhceeEEEEECCCCEEEEEeCC
Q 047238 394 FIEPDRGRFCVA-IQDD------PK-YSILGAWQQQNMLIIYDLNVPALRFGSEN 440 (446)
Q Consensus 394 ~~~~~~~~~C~~-~~~~------~~-~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 440 (446)
+++.. + .|+. +... ++ .||||+.|||++|+|||++++|||||+++
T Consensus 277 ~~~~~-g-~C~~~~~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 277 ILSNN-G-YCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp EEECS-S-CEEESEEEECCCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred cccCC-C-EEEEEEEECCCCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 99865 3 8984 5431 34 79999999999999999999999999874
No 12
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=1.5e-58 Score=454.77 Aligned_cols=305 Identities=19% Similarity=0.315 Sum_probs=261.6
Q ss_pred cccccceecCccEEEEEEECCCCceEEEEEEcCCCceeEeCC-----CCCCCCCCCCCCCCCCCCCccceecCCCCCCCC
Q 047238 85 DIHLPMAKQDLFYSVEVNIGTPMKPQHLLFDTASSLVWTQCQ-----PCIRCFDQTTPIFDPRASTTYSEIPCDDPLCRS 159 (446)
Q Consensus 85 ~~~~pl~~~~~~Y~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~~-----~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~ 159 (446)
.+++||...+.+|+++|.||||+|++.|+|||||+++||++. .|..| ..++.|||++|+|++..+
T Consensus 2 ~i~~~l~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C--~~~~~y~~~~SsT~~~~~-------- 71 (339)
T 3fv3_A 2 SISLSLINEGPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDC--KSSGTFTPSSSSSYKNLG-------- 71 (339)
T ss_dssp CEEEEEEECSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCT--TTTCCBCGGGCTTCEEEE--------
T ss_pred ceeeEEEcCCCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCC--CCCCcCCCccCcceeeCC--------
Confidence 367899988999999999999999999999999999999854 44455 568999999999999998
Q ss_pred CCCCCCCCceeeeeeCCCceEEEEEEEEEEEeecCCCccccccEEEEeeecCCCCcCCCCcceeEecCCCCCc-------
Q 047238 160 PFKCQNGKCVYTRRYHVGDVTRGLASRETFAFPVRNGFTFVPRLAFGCSNDNSGFAFGGKISGILGFNASPLS------- 232 (446)
Q Consensus 160 ~~~C~~~~~~~~~~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~GIlGLg~~~~s------- 232 (446)
|.|.+.|++|+.+.|.+++|+|+|+ ++.++++.|||++...+ .+||||||++..+
T Consensus 72 --------~~~~i~Yg~gs~~~G~~~~D~v~~g----~~~v~~~~fg~~~~~~~------~~GilGLg~~~~~~~~~~~~ 133 (339)
T 3fv3_A 72 --------AAFTIRYGDGSTSQGTWGKDTVTIN----GVSITGQQIADVTQTSV------DQGILGIGYTSNEAVYDTSG 133 (339)
T ss_dssp --------EEEEEECTTSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEESS------SSCEEECSCGGGCCCBCTTS
T ss_pred --------ceEEEEECCCceEEEEEEEEEEEEC----CEEECceEEEEEEecCC------CceeEEecCccccccccccc
Confidence 8899999999779999999999999 57899999999998776 6999999997653
Q ss_pred ---------hhHhhhhh---ccCceEEeeecCCCCceeEEEccCC-ccCCCCceeeeeecCCCCCeEEEEeeeEEEecEE
Q 047238 233 ---------LSSQLRNR---IQGLFSYCLVREMEATSVIKFGRDA-DVRRRDLETTPILLSDLRPHFYLHLLEISIGRHI 299 (446)
Q Consensus 233 ---------~~~Ql~~~---~~~~Fs~~l~~~~~~~g~l~fGg~d-~~~~g~l~~~p~~~~~~~~~w~v~l~~i~v~~~~ 299 (446)
++.||.++ .+++||+||.+.....|.|+|||+| ++|.|++.|+|+.. ..+|.|.+++|+|+++.
T Consensus 134 ~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~~~v~l~~i~v~g~~ 210 (339)
T 3fv3_A 134 RQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVTS---SQALTISLASVNLKGSS 210 (339)
T ss_dssp CBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEBCC---SSSCEEEEEEEEESSCE
T ss_pred cccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecceEEEeccc---CccEEEEEEEEEECCEe
Confidence 66777654 4689999999865678999999999 88999999999988 57999999999999988
Q ss_pred EeeCCCccccccCCCCcEEEeccCccccccchHHHHHHHHHHHHHhccCCCCCCCCCCCCCccccccCCCCCCcCeEEEE
Q 047238 300 VRFPPGAFDIMRDGTGGFIIDTGTPVTFIRNGPYQTLMQRYDQILRSLGRQRIPYNASQEFDYCYRYDSSFKAYPSMTFH 379 (446)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~i~~~ 379 (446)
+... ..++|||||++++||++++++|++++.+..... .... ..+.++|+.. .+|+|+|+
T Consensus 211 ~~~~-----------~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~-~~~~----~~~~~~C~~~-----~~p~i~f~ 269 (339)
T 3fv3_A 211 FSFG-----------DGALLDSGTTLTYFPSDFAAQLADKAGARLVQV-ARDQ----YLYFIDCNTD-----TSGTTVFN 269 (339)
T ss_dssp EEEE-----------EEEEECTTBSSEEECHHHHHHHHHHHTCEEEEE-ETTE----EEEEECTTCC-----CCSEEEEE
T ss_pred ecCC-----------ccEEEeCCCCCEecCHHHHHHHHHHcCCEEccc-cccC----ceEEEecCCC-----CCCcEEEE
Confidence 7642 359999999999999999999999997653210 0011 2345899962 68999999
Q ss_pred Ec-CeEEEEcCCCeEEEEcCCCceEE-EEEcCCCceeechhhhceeEEEEECCCCEEEEEeCCCCCC
Q 047238 380 LQ-EADYIVQPENMYFIEPDRGRFCV-AIQDDPKYSILGAWQQQNMLIIYDLNVPALRFGSENCANG 444 (446)
Q Consensus 380 f~-g~~~~l~~~~~y~~~~~~~~~C~-~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~c~~~ 444 (446)
|+ |++++||+++ |+++..+ ..|+ ++.+ .+.||||++|||++|+|||++++|||||+++|+++
T Consensus 270 f~~g~~~~v~~~~-~~~~~~~-~~C~~~i~~-~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~~ 333 (339)
T 3fv3_A 270 FGNGAKITVPNTE-YVYQNGD-GTCLWGIQP-SDDTILGDNFLRHAYLLYNLDANTISIAQVKYTTD 333 (339)
T ss_dssp ETTSCEEEEEGGG-GEEECSS-SCEEESEEE-CSSCEECHHHHTTEEEEEETTTTEEEEEEBCCCSC
T ss_pred ECCCCEEEECHHH-heeeCCC-CeEEEEEEe-CCcEEeChHHHhCEEEEEECCCCEEEEEecCCCCc
Confidence 95 7999999999 9988543 4695 4655 56899999999999999999999999999999965
No 13
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=1.8e-59 Score=457.61 Aligned_cols=302 Identities=23% Similarity=0.352 Sum_probs=257.0
Q ss_pred ccce-ecCccEEEEEEECCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCccceecCCCCCCCCCCCCCCC
Q 047238 88 LPMA-KQDLFYSVEVNIGTPMKPQHLLFDTASSLVWTQCQPCIRCFDQTTPIFDPRASTTYSEIPCDDPLCRSPFKCQNG 166 (446)
Q Consensus 88 ~pl~-~~~~~Y~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~C~~~ 166 (446)
+||. +.+.+|+++|.||||+|++.|++||||+++||+|..|..|.|..++.|||++|+|++...
T Consensus 3 ~~l~n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~~~y~~~~SsT~~~~~--------------- 67 (320)
T 4aa9_A 3 EPLTSYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSNVCKNHHRFDPRKSSTFRNLG--------------- 67 (320)
T ss_dssp -----CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEEE---------------
T ss_pred ccceeccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCCccccCCCCCCCCCCCcCeEcCC---------------
Confidence 5777 578999999999999999999999999999999999987666788999999999999988
Q ss_pred CceeeeeeCCCceEEEEEEEEEEEeecCCCccccccEEEEeeecCCCCcCC--CCcceeEecCCCCCc------hhHhhh
Q 047238 167 KCVYTRRYHVGDVTRGLASRETFAFPVRNGFTFVPRLAFGCSNDNSGFAFG--GKISGILGFNASPLS------LSSQLR 238 (446)
Q Consensus 167 ~~~~~~~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~~fg~~~~~~~~~~~--~~~~GIlGLg~~~~s------~~~Ql~ 238 (446)
|.|.+.|++|+ +.|.+++|+|+|+ ++.++++.|||++...+ ..+ ...+||||||++..+ ++++|.
T Consensus 68 -~~~~i~Yg~gs-~~G~~~~D~v~ig----~~~v~~~~fg~~~~~~~-~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~ 140 (320)
T 4aa9_A 68 -KPLSIHYGTGS-MEGFLGYDTVTVS----NIVDPNQTVGLSTEQPG-EVFTYSEFDGILGLAYPSLASEYSVPVFDNMM 140 (320)
T ss_dssp -EEEEEEETTEE-EEEEEEEEEEEET----TEEEEEEEEEEEEECCS-HHHHSCCCSEEEECSCGGGSCTTCCCHHHHHH
T ss_pred -cEEEEEECCcE-EEEEEEEEEEEEC----CEeecCeEEEEEEEccc-ccccccCcccEEecCcccccccCCCCHHHHHH
Confidence 88999999999 8999999999999 57899999999998765 322 267999999987654 556665
Q ss_pred hh---ccCceEEeeecCCCCceeEEEccCC-ccCCCCceeeeeecCCCCCeEEEEeeeEEEecEEEeeCCCccccccCCC
Q 047238 239 NR---IQGLFSYCLVREMEATSVIKFGRDA-DVRRRDLETTPILLSDLRPHFYLHLLEISIGRHIVRFPPGAFDIMRDGT 314 (446)
Q Consensus 239 ~~---~~~~Fs~~l~~~~~~~g~l~fGg~d-~~~~g~l~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~ 314 (446)
++ ..++||+||.+. ...|.|+|||+| ++|.|++.|+|+.. ..+|.|.+++|+|+++.+..+..
T Consensus 141 ~~g~i~~~~Fs~~l~~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~w~v~l~~i~v~~~~~~~~~~--------- 207 (320)
T 4aa9_A 141 DRHLVARDLFSVYMDRN-GQGSMLTLGAIDPSYYTGSLHWVPVTL---QQYWQFTVDSVTINGVAVACVGG--------- 207 (320)
T ss_dssp HTTCSSSSEEEEECCSS-SSCCEEEETCCCGGGEEEEEEEEECSS---BTTBEEEECEEEETTEEEESTTC---------
T ss_pred hCCCCCCceEEEEeCCC-CCCeEEEEcccCHHHccCceEEEEccc---CCceEEEEeEEEECCEEeccCCC---------
Confidence 43 478999999985 578999999999 88999999999986 68999999999999998764322
Q ss_pred CcEEEeccCccccccchHHHHHHHHHHHHHhccCCCCCCCCCCCCCccccccCCCCCCcCeEEEEEcCeEEEEcCCCeEE
Q 047238 315 GGFIIDTGTPVTFIRNGPYQTLMQRYDQILRSLGRQRIPYNASQEFDYCYRYDSSFKAYPSMTFHLQEADYIVQPENMYF 394 (446)
Q Consensus 315 ~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~i~~~f~g~~~~l~~~~~y~ 394 (446)
..++|||||++++||++++++|.+++++... .. ..+.++|+..+ .+|+|+|+|+|++++||+++ |+
T Consensus 208 ~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~-----~~----g~~~~~C~~~~----~~p~i~f~f~g~~~~l~~~~-y~ 273 (320)
T 4aa9_A 208 CQAILDTGTSVLFGPSSDILKIQMAIGATEN-----RY----GEFDVNCGNLR----SMPTVVFEINGRDYPLSPSA-YT 273 (320)
T ss_dssp EEEEECTTCSSEEEEHHHHHHHHHHTTCEEC-----TT----SCEEECGGGGG----GCCCEEEEETTEEEEECHHH-HE
T ss_pred cEEEEECCCCcEECCHHHHHHHHHHhCCccc-----CC----CcEEEeCCCCC----cCceEEEEECCEEEEECHHH-hc
Confidence 5699999999999999999999999855411 11 23448999876 79999999999999999999 99
Q ss_pred EEcCCCceEEE-EEcC--CCceeechhhhceeEEEEECCCCEEEEEeCC
Q 047238 395 IEPDRGRFCVA-IQDD--PKYSILGAWQQQNMLIIYDLNVPALRFGSEN 440 (446)
Q Consensus 395 ~~~~~~~~C~~-~~~~--~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 440 (446)
.+ .+..|+. +... ++.||||++|||++|+|||++++|||||+++
T Consensus 274 ~~--~~~~C~~~i~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 274 SK--DQGFCTSGFQGDNNSELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp EE--ETTEEEESEEEETTCCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred cC--CCCeEEEEEEcCCCCCcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 76 3467985 5542 3579999999999999999999999999975
No 14
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=7.8e-59 Score=454.75 Aligned_cols=304 Identities=21% Similarity=0.332 Sum_probs=257.5
Q ss_pred ccccce-ecCccEEEEEEECCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCccceecCCCCCCCCCCCCC
Q 047238 86 IHLPMA-KQDLFYSVEVNIGTPMKPQHLLFDTASSLVWTQCQPCIRCFDQTTPIFDPRASTTYSEIPCDDPLCRSPFKCQ 164 (446)
Q Consensus 86 ~~~pl~-~~~~~Y~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~C~ 164 (446)
.++||. ..+.+|+++|.||||+|++.|+|||||+++||+|..|..|.|..++.|||++|+|++...
T Consensus 3 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~~------------- 69 (329)
T 1dpj_A 3 HDVPLTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLHSKYDHEASSSYKANG------------- 69 (329)
T ss_dssp EEEECEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEEE-------------
T ss_pred cceeeeecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCCCcccCCcCcCCcccCcCeEECC-------------
Confidence 357888 688999999999999999999999999999999999987555678899999999999987
Q ss_pred CCCceeeeeeCCCceEEEEEEEEEEEeecCCCccccccEEEEeeecCCCCcC--CCCcceeEecCCCCCch------hHh
Q 047238 165 NGKCVYTRRYHVGDVTRGLASRETFAFPVRNGFTFVPRLAFGCSNDNSGFAF--GGKISGILGFNASPLSL------SSQ 236 (446)
Q Consensus 165 ~~~~~~~~~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~~fg~~~~~~~~~~--~~~~~GIlGLg~~~~s~------~~Q 236 (446)
|.|.+.|++|+ +.|.+++|+|+|+ ++.++++.|||++...+ .. ....+||||||++..++ +.+
T Consensus 70 ---~~~~i~Yg~Gs-~~G~~~~D~v~ig----~~~~~~~~fg~~~~~~~-~~f~~~~~~GilGLg~~~~s~~~~~~~~~~ 140 (329)
T 1dpj_A 70 ---TEFAIQYGTGS-LEGYISQDTLSIG----DLTIPKQDFAEATSEPG-LTFAFGKFDGILGLGYDTISVDKVVPPFYN 140 (329)
T ss_dssp ---EEEEEEETTEE-EEEEEEEEEEEET----TEEEEEEEEEEEEECCH-HHHTTCSCSEEEECSCGGGCGGGCCCHHHH
T ss_pred ---cEEEEEECCce-EEEEEEEEEEEEC----CeEECCeEEEEEEecCc-cccccCCcceEEEeCCchhhccCCCCHHHH
Confidence 88999999996 9999999999998 57899999999998754 21 23689999999987764 234
Q ss_pred hhhh---ccCceEEeeecCC---CCceeEEEccCC-ccCCCCceeeeeecCCCCCeEEEEeeeEEEecEEEeeCCCcccc
Q 047238 237 LRNR---IQGLFSYCLVREM---EATSVIKFGRDA-DVRRRDLETTPILLSDLRPHFYLHLLEISIGRHIVRFPPGAFDI 309 (446)
Q Consensus 237 l~~~---~~~~Fs~~l~~~~---~~~g~l~fGg~d-~~~~g~l~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~ 309 (446)
|.++ ..++||+||.+.. ...|.|+|||+| ++|.|++.|+|+.. ..+|.|.+++|+|+++.+...
T Consensus 141 l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~~~v~l~~i~v~~~~~~~~------ 211 (329)
T 1dpj_A 141 AIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVRR---KAYWEVKFEGIGLGDEYAELE------ 211 (329)
T ss_dssp HHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECSS---BTTBEEEEEEEEETTEEEECS------
T ss_pred HHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcCC---CceEEEEeeeEEECCeEecCC------
Confidence 4433 3789999998732 347999999999 88999999999987 589999999999999877532
Q ss_pred ccCCCCcEEEeccCccccccchHHHHHHHHHHHHHhccCCCCCCCCCCCCCccccccCCCCCCcCeEEEEEcCeEEEEcC
Q 047238 310 MRDGTGGFIIDTGTPVTFIRNGPYQTLMQRYDQILRSLGRQRIPYNASQEFDYCYRYDSSFKAYPSMTFHLQEADYIVQP 389 (446)
Q Consensus 310 ~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~i~~~f~g~~~~l~~ 389 (446)
...+||||||++++||++++++|.+++++.. ... ..+.++|+... .+|+|+|+|+|++++||+
T Consensus 212 ----~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~-----~~~----g~~~~~C~~~~----~~P~i~f~f~g~~~~i~~ 274 (329)
T 1dpj_A 212 ----SHGAAIDTGTSLITLPSGLAEMINAEIGAKK-----GWT----GQYTLDCNTRD----NLPDLIFNFNGYNFTIGP 274 (329)
T ss_dssp ----SCEEEECTTCSCEEECHHHHHHHHHHHTCEE-----CTT----SSEEECGGGGG----GCCCEEEEETTEEEEECT
T ss_pred ----CccEEeeCCCCcEECCHHHHHHHHHHhCCcc-----CCC----CeEEEECCCCC----cCCcEEEEECCEEEEECH
Confidence 2579999999999999999999999986441 111 22347999875 789999999999999999
Q ss_pred CCeEEEEcCCCceEEE-EEcC------CCceeechhhhceeEEEEECCCCEEEEEeCC
Q 047238 390 ENMYFIEPDRGRFCVA-IQDD------PKYSILGAWQQQNMLIIYDLNVPALRFGSEN 440 (446)
Q Consensus 390 ~~~y~~~~~~~~~C~~-~~~~------~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 440 (446)
++ |+++.. ..|+. +... ++.||||++|||++|+|||++++|||||+++
T Consensus 275 ~~-y~~~~~--~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 275 YD-YTLEVS--GSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp TT-SEEEET--TEEEECEEECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred HH-hEecCC--CEEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 99 999764 57984 5432 3589999999999999999999999999975
No 15
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=8e-59 Score=457.30 Aligned_cols=308 Identities=17% Similarity=0.286 Sum_probs=259.3
Q ss_pred cccccceecCccEEEEEEECCCCceEEEEEEcCCCceeEeCCC--CCCC-------CCCCCCCCCCCCCCccceecCCCC
Q 047238 85 DIHLPMAKQDLFYSVEVNIGTPMKPQHLLFDTASSLVWTQCQP--CIRC-------FDQTTPIFDPRASTTYSEIPCDDP 155 (446)
Q Consensus 85 ~~~~pl~~~~~~Y~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~~~--C~~C-------~~~~~~~f~~~~SsT~~~~~c~~~ 155 (446)
.+.+|+...+.+|+++|.||||+|++.|++||||+++||+|.. |..| .|..++.|+|++|+|++..+
T Consensus 2 ~v~~~l~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~---- 77 (342)
T 3pvk_A 2 AVPVTLHNEQVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQDLN---- 77 (342)
T ss_dssp CEEEEEEECSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGTTCCBCGGGCTTCEEEE----
T ss_pred CcceEEecCCcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCCCCCcCCCccCcceeecC----
Confidence 3567888889999999999999999999999999999998764 6322 23568899999999999998
Q ss_pred CCCCCCCCCCCCceeeeeeCCCceEEEEEEEEEEEeecCCCccccccEEEEeeecCCCCcCCCCcceeEecCCCCC----
Q 047238 156 LCRSPFKCQNGKCVYTRRYHVGDVTRGLASRETFAFPVRNGFTFVPRLAFGCSNDNSGFAFGGKISGILGFNASPL---- 231 (446)
Q Consensus 156 ~C~~~~~C~~~~~~~~~~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~GIlGLg~~~~---- 231 (446)
|.|.+.|++|+.+.|.+++|+|+|+ ++.++++.|||++.... .+||||||++..
T Consensus 78 ------------~~~~i~Yg~gs~~~G~~~~D~v~ig----~~~v~~~~fg~~~~~~~------~~GilGLg~~~~~~~~ 135 (342)
T 3pvk_A 78 ------------TPFKIGYGDGSSSQGTLYKDTVGFG----GVSIKNQVLADVDSTSI------DQGILGVGYKTNEAGG 135 (342)
T ss_dssp ------------EEEEEECSSSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEESS------SSCEEECSCGGGCSSC
T ss_pred ------------CeEEEEecCCCeEEEEEEEEEEEEC----CEEecceEEEEEEccCC------CccEEEecCccccccc
Confidence 8899999999889999999999999 57899999999987654 799999999873
Q ss_pred ---chhHhhhhh---ccCceEEeeecCCCCceeEEEccCC-ccCCCCceeeeeecCCCCCeEEEEeeeEEEecEEEeeCC
Q 047238 232 ---SLSSQLRNR---IQGLFSYCLVREMEATSVIKFGRDA-DVRRRDLETTPILLSDLRPHFYLHLLEISIGRHIVRFPP 304 (446)
Q Consensus 232 ---s~~~Ql~~~---~~~~Fs~~l~~~~~~~g~l~fGg~d-~~~~g~l~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~ 304 (446)
+++.||.++ ..++||+||.+.....|.|+|||+| .+|.|++.|+|+.. ..+|.|.+++|+|+++.+..+.
T Consensus 136 ~~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~~~v~l~~i~v~g~~~~~~~ 212 (342)
T 3pvk_A 136 SYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPVTS---DRELRISLGSVEVSGKTINTDN 212 (342)
T ss_dssp SSCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCC---SSSCEEEEEEEEETTEEEEEEE
T ss_pred cCCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCccceeeeeEEeecCc---cceEEEEEeEEEECCEEecCCC
Confidence 577777654 4689999998865678999999999 89999999999988 5699999999999999886532
Q ss_pred CccccccCCCCcEEEeccCccccccchHHHHHHHHHHHHHhccCCCCCCCCCCCCCccccccCCCCCCcCeEEEEEc-Ce
Q 047238 305 GAFDIMRDGTGGFIIDTGTPVTFIRNGPYQTLMQRYDQILRSLGRQRIPYNASQEFDYCYRYDSSFKAYPSMTFHLQ-EA 383 (446)
Q Consensus 305 ~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~i~~~f~-g~ 383 (446)
..+||||||++++||++++++|.+++.+....... .. ..+.++|+ ..|+|+|+|+ |.
T Consensus 213 ----------~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~-~~----~~~~~~C~-------~~p~i~f~f~~g~ 270 (342)
T 3pvk_A 213 ----------VDVLLDSGTTITYLQQDLADQIIKAFNGKLTQDSN-GN----SFYEVDCN-------LSGDVVFNFSKNA 270 (342)
T ss_dssp ----------EEEEECTTCSSEEECHHHHHHHHHHTTCEEEECTT-SC----EEEEECSC-------CCSEEEEEESTTC
T ss_pred ----------ceEEEeCCCCCeecCHHHHHHHHHHcCCeecccCC-Cc----eEEEEecC-------CCCceEEEECCCC
Confidence 36999999999999999999999999766432110 01 11458998 4599999998 79
Q ss_pred EEEEcCCCeEEEEcC--CC---ceEEEEEcCCCceeechhhhceeEEEEECCCCEEEEEeCCCCCC
Q 047238 384 DYIVQPENMYFIEPD--RG---RFCVAIQDDPKYSILGAWQQQNMLIIYDLNVPALRFGSENCANG 444 (446)
Q Consensus 384 ~~~l~~~~~y~~~~~--~~---~~C~~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~c~~~ 444 (446)
+++||+++ |+++.. ++ ..|+..+...+.||||+.|||++|+|||++++|||||+++|++.
T Consensus 271 ~~~vp~~~-~~~~~~~~~g~~~~~C~~~i~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~~ 335 (342)
T 3pvk_A 271 KISVPASE-FAASLQGDDGQPYDKCQLLFDVNDANILGDNFLRSAYIVYDLDDNEISLAQVKYTSA 335 (342)
T ss_dssp EEEEEGGG-GEEC----------CEEESEEECTTCEECHHHHTTEEEEEETTTTEEEEEEBCCCSC
T ss_pred EEEEcHHH-heeeccccCCCcCCeeEEEEeeCCCeEeCHHHHhcEEEEEECCCCEEEEEecCCCCC
Confidence 99999999 998732 22 67986544457899999999999999999999999999999864
No 16
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=3.1e-58 Score=449.51 Aligned_cols=304 Identities=20% Similarity=0.316 Sum_probs=256.5
Q ss_pred ccccceecCccEEEEEEECCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCccceecCCCCCCCCCCCCCC
Q 047238 86 IHLPMAKQDLFYSVEVNIGTPMKPQHLLFDTASSLVWTQCQPCIRCFDQTTPIFDPRASTTYSEIPCDDPLCRSPFKCQN 165 (446)
Q Consensus 86 ~~~pl~~~~~~Y~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~C~~ 165 (446)
+.++....+.+|+++|.||||+|++.|+|||||+++||+|..|..| ++.++.|||++|+|++...
T Consensus 6 v~~~~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c-~~~~~~y~~~~SsT~~~~~-------------- 70 (325)
T 2apr_A 6 VPMTDYGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC-GSGQTKYDPNQSSTYQADG-------------- 70 (325)
T ss_dssp EEEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC-CTTSCCBCGGGCTTCEEEE--------------
T ss_pred eeeeecCCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH-hcCCCCCCcccCCCeeeCC--------------
Confidence 4445557899999999999999999999999999999999999999 8889999999999999976
Q ss_pred CCceeeeeeCCCceEEEEEEEEEEEeecCCCccccccEEEEeeecCCCCcCCC-CcceeEecCCCCCc-------hhHhh
Q 047238 166 GKCVYTRRYHVGDVTRGLASRETFAFPVRNGFTFVPRLAFGCSNDNSGFAFGG-KISGILGFNASPLS-------LSSQL 237 (446)
Q Consensus 166 ~~~~~~~~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~~fg~~~~~~~~~~~~-~~~GIlGLg~~~~s-------~~~Ql 237 (446)
|.|.+.|++|+.+.|.+++|+|+|+ ++.++++.|||++...+ .+.. ..+||||||++..+ +++||
T Consensus 71 --~~~~i~Yg~Gs~~~G~~~~D~v~~g----~~~v~~~~fg~~~~~~~-~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l 143 (325)
T 2apr_A 71 --RTWSISYGDGSSASGILAKDNVNLG----GLLIKGQTIELAKREAA-SFASGPNDGLLGLGFDTITTVRGVKTPMDNL 143 (325)
T ss_dssp --EEEEEECTTSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEECH-HHHTSSCSEEEECSCGGGCSSTTCCCHHHHH
T ss_pred --CEEEEEECCCCCEEEEEEEEEEEEC----CEEECcEEEEEEeccCc-ccccCCCceEEEeCCcccccccCCCCHHHHH
Confidence 8899999999989999999999998 57899999999998765 4222 58999999998754 45666
Q ss_pred hhh---ccCceEEeeecC-CCCceeEEEccCC-ccCCCCceeeeeecCCCCCeEEEEeeeEEEecEEEeeCCCccccccC
Q 047238 238 RNR---IQGLFSYCLVRE-MEATSVIKFGRDA-DVRRRDLETTPILLSDLRPHFYLHLLEISIGRHIVRFPPGAFDIMRD 312 (446)
Q Consensus 238 ~~~---~~~~Fs~~l~~~-~~~~g~l~fGg~d-~~~~g~l~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~ 312 (446)
.++ ..++||+||.+. ....|.|+|||+| ++|.|++.|+|+... ..+|.|.+++|+||++ +.. .
T Consensus 144 ~~qg~i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~~v~l~~i~vg~~-~~~--~------- 211 (325)
T 2apr_A 144 ISQGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNS--RGWWGITVDRATVGTS-TVA--S------- 211 (325)
T ss_dssp HHTTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCT--TSSCEEEECEEEETTE-EEE--C-------
T ss_pred HhcCCCCCceEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccCC--CCEEEEEEeEEEECCE-ecC--C-------
Confidence 543 378999999762 3568999999999 889999999999752 4799999999999993 321 1
Q ss_pred CCCcEEEeccCccccccchHHHHHHHHHHHHHhccCCCCCCCCCCCCCccccccCCCCCCcCeEEEEEcCeEEEEcCCCe
Q 047238 313 GTGGFIIDTGTPVTFIRNGPYQTLMQRYDQILRSLGRQRIPYNASQEFDYCYRYDSSFKAYPSMTFHLQEADYIVQPENM 392 (446)
Q Consensus 313 ~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~i~~~f~g~~~~l~~~~~ 392 (446)
...+||||||++++||+++|+++++++.+.+.. . ..+.++|+.. .+|+|+|+|+|.+++||+++
T Consensus 212 -~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~~~-----~----g~~~~~C~~~-----~~p~i~f~f~g~~~~ip~~~- 275 (325)
T 2apr_A 212 -SFDGILDTGTTLLILPNNIAASVARAYGASDNG-----D----GTYTISCDTS-----AFKPLVFSINGASFQVSPDS- 275 (325)
T ss_dssp -CEEEEECTTCSSEEEEHHHHHHHHHHHTCEECS-----S----SCEEECSCGG-----GCCCEEEEETTEEEEECGGG-
T ss_pred -CceEEEecCCccEECCHHHHHHHHHHHhcccCC-----C----CeEEEECCCC-----CCCcEEEEECCEEEEECHHH-
Confidence 146999999999999999999999998665321 1 1234789852 58999999999899999999
Q ss_pred EEEEcCCCceEEEE-EcC-CCceeechhhhceeEEEEECCCCEEEEEeCC
Q 047238 393 YFIEPDRGRFCVAI-QDD-PKYSILGAWQQQNMLIIYDLNVPALRFGSEN 440 (446)
Q Consensus 393 y~~~~~~~~~C~~~-~~~-~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 440 (446)
|+++.. +..|++. ... .+.||||+.|||++|+|||++++|||||+++
T Consensus 276 ~~~~~~-~~~C~~~i~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 276 LVFEEF-QGQCIAGFGYGNWGFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp GEEEEE-TTEEEESEEEESSSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred EEEcCC-CCeEEEEEEcCCCCCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 888654 5689874 332 4689999999999999999999999999874
No 17
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=3.3e-59 Score=471.79 Aligned_cols=301 Identities=19% Similarity=0.301 Sum_probs=256.6
Q ss_pred ccccce-ecCccEEEEEEECCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCccceecCCCCCCCCCCCCC
Q 047238 86 IHLPMA-KQDLFYSVEVNIGTPMKPQHLLFDTASSLVWTQCQPCIRCFDQTTPIFDPRASTTYSEIPCDDPLCRSPFKCQ 164 (446)
Q Consensus 86 ~~~pl~-~~~~~Y~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~C~ 164 (446)
..+||. ..+.+|+++|.||||+|++.|+|||||+++||+|..|..+.|..++.|||++|+|++..+
T Consensus 128 ~~~~L~n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~~~~C~~~~~ydps~SsT~~~~~------------- 194 (453)
T 2bju_A 128 DNIELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCLTKHLYDSSKSRTYEKDG------------- 194 (453)
T ss_dssp EEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSTTGGGSCCBCGGGCTTCEEEE-------------
T ss_pred CceeeEecCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCCccccCCCCcCCCccCCceeECC-------------
Confidence 457888 688999999999999999999999999999999999975555788999999999999988
Q ss_pred CCCceeeeeeCCCceEEEEEEEEEEEeecCCCccccccEEEEeeecCC--CCcCC--CCcceeEecCCCCCc------hh
Q 047238 165 NGKCVYTRRYHVGDVTRGLASRETFAFPVRNGFTFVPRLAFGCSNDNS--GFAFG--GKISGILGFNASPLS------LS 234 (446)
Q Consensus 165 ~~~~~~~~~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~~fg~~~~~~--~~~~~--~~~~GIlGLg~~~~s------~~ 234 (446)
|.|.+.|++|+ +.|.+++|+|+|+ ++.++ +.|||++... + ..+ ...+||||||++..+ ++
T Consensus 195 ---~~~~i~YgdGs-~~G~~~~Dtv~ig----~~~v~-~~Fg~a~~~~~~g-~~f~~~~~dGIlGLg~~~~s~~~~~~~~ 264 (453)
T 2bju_A 195 ---TKVEMNYVSGT-VSGFFSKDLVTVG----NLSLP-YKFIEVIDTNGFE-PTYTASTFDGILGLGWKDLSIGSVDPIV 264 (453)
T ss_dssp ---EEEEEECSSSE-EEEEEEEEEEEET----TEEEE-EEEEEEEECGGGT-THHHHSSCCEEEECSCGGGSTTCCCCHH
T ss_pred ---cEEEEEcCCCC-eEEEEEEEEEEEe----CcEEE-EEEEEEEEecccC-ccccccCCceeEeccCCcccccCCCcHH
Confidence 88999999999 8999999999999 57888 9999999876 4 323 368999999998755 34
Q ss_pred Hhhhhh---ccCceEEeeecCCCCceeEEEccCC-ccCCCCceeeeeecCCCCCeEEEEeeeEEEecEEEeeCCCccccc
Q 047238 235 SQLRNR---IQGLFSYCLVREMEATSVIKFGRDA-DVRRRDLETTPILLSDLRPHFYLHLLEISIGRHIVRFPPGAFDIM 310 (446)
Q Consensus 235 ~Ql~~~---~~~~Fs~~l~~~~~~~g~l~fGg~d-~~~~g~l~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~ 310 (446)
.+|.++ ..++||+||.+.+...|.|+|||+| ++|.|++.|+|+.. ..+|.|.++ |+|+++ + . .
T Consensus 265 ~~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~l~~~pv~~---~~~w~V~l~-I~Vgg~-~-~--~----- 331 (453)
T 2bju_A 265 VELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLNH---DLYWQITLD-AHVGNI-M-L--E----- 331 (453)
T ss_dssp HHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEEEE---ETTEEEEEE-EEETTE-E-E--E-----
T ss_pred HHHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCceEEEecCC---CceEEEEEE-EEECcE-E-e--c-----
Confidence 555543 3799999999865578999999999 88999999999987 589999999 999993 3 2 1
Q ss_pred cCCCCcEEEeccCccccccchHHHHHHHHHHHHHhccCCCCCCCCCC-CCCccccccCCCCCCcCeEEEEEcCeEEEEcC
Q 047238 311 RDGTGGFIIDTGTPVTFIRNGPYQTLMQRYDQILRSLGRQRIPYNAS-QEFDYCYRYDSSFKAYPSMTFHLQEADYIVQP 389 (446)
Q Consensus 311 ~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~-~~~~~C~~~~~~~~~~p~i~~~f~g~~~~l~~ 389 (446)
...+||||||++++||++++++|.+++++. +. .. . .+.++|+. . .+|+|+|+|+|++++||+
T Consensus 332 ---~~~aIiDSGTsl~~lP~~~~~~l~~~i~~~---~~--~~----g~~~~v~C~~-~----~~P~itf~fgg~~~~l~~ 394 (453)
T 2bju_A 332 ---KANCIVDSGTSAITVPTDFLNKMLQNLDVI---KV--PF----LPFYVTLCNN-S----KLPTFEFTSENGKYTLEP 394 (453)
T ss_dssp ---EEEEEECTTCCSEEECHHHHHHHTTTSSCE---EC--TT----SSCEEEETTC-T----TCCCEEEECSSCEEEECH
T ss_pred ---cccEEEcCCCCeEecCHHHHHHHHHHhCCc---cc--CC----CceEEEecCC-C----CCCcEEEEECCEEEEECH
Confidence 156999999999999999999999988653 11 11 2 24589997 3 789999999999999999
Q ss_pred CCeEEEEcCC--CceEEE-EEcCC---CceeechhhhceeEEEEECCCCEEEEEeCC
Q 047238 390 ENMYFIEPDR--GRFCVA-IQDDP---KYSILGAWQQQNMLIIYDLNVPALRFGSEN 440 (446)
Q Consensus 390 ~~~y~~~~~~--~~~C~~-~~~~~---~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 440 (446)
++ |+++... ...|+. +.+.+ +.||||++|||++|+|||++++|||||+++
T Consensus 395 ~~-yi~~~~~~g~~~C~~~~~~~~~~~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 395 EY-YLQHIEDVGPGLCMLNIIGLDFPVPTFILGDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp HH-HEEECTTTSTTEEEECEEECCCSSCEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred HH-hEeecccCCCceEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 99 9998753 468984 65543 489999999999999999999999999976
No 18
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=2.4e-58 Score=450.99 Aligned_cols=301 Identities=19% Similarity=0.248 Sum_probs=253.0
Q ss_pred eecCccEEEEEEECCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCccceecCCCCCCCCCCCCCCCCcee
Q 047238 91 AKQDLFYSVEVNIGTPMKPQHLLFDTASSLVWTQCQPCIRCFDQTTPIFDPRASTTYSEIPCDDPLCRSPFKCQNGKCVY 170 (446)
Q Consensus 91 ~~~~~~Y~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~C~~~~~~~ 170 (446)
...+.+|+++|.||||+|++.|+|||||+++||+|..|..|.|+.++.|||++|+|++.+.| |.|
T Consensus 11 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~~~~~y~~~~SsT~~~~~~---------------~~~ 75 (329)
T 3c9x_A 11 DSADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETPKSSATGHAIYTPSKSSTSKKVSG---------------ASW 75 (329)
T ss_dssp STTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCHHHHTTSCCBCGGGCTTCEECTT---------------CBE
T ss_pred CCCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCCccccCCCCcCCcccCcCceEcCC---------------CeE
Confidence 35788999999999999999999999999999999999999888999999999999998653 789
Q ss_pred eeeeCCCceEEEEEEEEEEEeecCCCccccccEEEEeeecCCCCcCC--CCcceeEecCCCCCc---------hhHhhhh
Q 047238 171 TRRYHVGDVTRGLASRETFAFPVRNGFTFVPRLAFGCSNDNSGFAFG--GKISGILGFNASPLS---------LSSQLRN 239 (446)
Q Consensus 171 ~~~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~~fg~~~~~~~~~~~--~~~~GIlGLg~~~~s---------~~~Ql~~ 239 (446)
.+.|++|+.+.|.+++|+|+|+ ++.++++.|||++...+ .+. ...+||||||++..+ ++++|.+
T Consensus 76 ~i~Yg~Gs~~~G~~~~D~v~ig----~~~v~~~~fg~~~~~~~-~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~ 150 (329)
T 3c9x_A 76 SISYGDGSSSSGDVYTDKVTIG----GFSVNTQGVESATRVST-EFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSNAAS 150 (329)
T ss_dssp EEECTTSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEECH-HHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHHT
T ss_pred EEEeCCCCcEEEEEEEEEEEEC----CEEEcceEEEEEEecCc-cccccCCCceeEEeCcccccccCCCCCCCHHHHHHH
Confidence 9999999989999999999998 57899999999998765 432 368999999997655 3445443
Q ss_pred h-ccCceEEeeecCCCCceeEEEccCC-ccCCCCceeeeeecCCCCCeEEEEeeeEEEecEEEeeCCCccccccCCCCcE
Q 047238 240 R-IQGLFSYCLVREMEATSVIKFGRDA-DVRRRDLETTPILLSDLRPHFYLHLLEISIGRHIVRFPPGAFDIMRDGTGGF 317 (446)
Q Consensus 240 ~-~~~~Fs~~l~~~~~~~g~l~fGg~d-~~~~g~l~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~ 317 (446)
+ ..++||+||.+ ...|.|+|||+| ++|.|++.|+|+... ..+|.|.+++|+|+++.+. .. ...+
T Consensus 151 ~i~~~~FS~~l~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~~v~l~~i~v~~~~~~--~~--------~~~a 216 (329)
T 3c9x_A 151 SLAEPLFTADLRH--GQNGSYNFGYIDTSVAKGPVAYTPVDNS--QGFWEFTASGYSVGGGKLN--RN--------SIDG 216 (329)
T ss_dssp TSSSSEEEEECCS--SSCEEEEESSCCGGGCSSCEEEEECBCT--TSSCEEEECCEEETTCCCC--SC--------CEEE
T ss_pred hcCCCEEEEEecC--CCCcEEEEeCcChhhcccceEEEEccCC--CceEEEEEeeEEECCEecc--CC--------CceE
Confidence 3 37899999987 468999999999 889999999999852 4799999999999998653 11 2469
Q ss_pred EEeccCccccccchHHHHHHHHHHHHHhccCCCCCCCCCCCCCccccccCCCCCCcCeEEEEEcCeEEEEcCCCeEEEEc
Q 047238 318 IIDTGTPVTFIRNGPYQTLMQRYDQILRSLGRQRIPYNASQEFDYCYRYDSSFKAYPSMTFHLQEADYIVQPENMYFIEP 397 (446)
Q Consensus 318 iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~i~~~f~g~~~~l~~~~~y~~~~ 397 (446)
||||||++++||++++++|++++.+... .... ..+.++|+. .+|+|+|+|+|++++||+++ |+++.
T Consensus 217 iiDSGTt~~~lp~~~~~~i~~~i~~a~~---~~~~----~~~~~~C~~------~~P~i~f~f~g~~~~ip~~~-~~~~~ 282 (329)
T 3c9x_A 217 IADTGTTLLLLDDNVVDAYYANVQSAQY---DNQQ----EGVVFDCDE------DLPSFSFGVGSSTITIPGDL-LNLTP 282 (329)
T ss_dssp EECTTCCSEEECHHHHHHHHTTCTTCEE---ETTT----TEEEEETTC------CCCCEEEEETTEEEEECGGG-GEEEE
T ss_pred EEECCCCcEeCCHHHHHHHHHhCCCcEE---cCCC----CEEEEECCC------CCCcEEEEECCEEEEECHHH-eeeec
Confidence 9999999999999999999988743211 0011 223378983 78999999999999999999 88875
Q ss_pred CC--CceEEE-EEcC--CCceeechhhhceeEEEEECCCCEEEEEeC
Q 047238 398 DR--GRFCVA-IQDD--PKYSILGAWQQQNMLIIYDLNVPALRFGSE 439 (446)
Q Consensus 398 ~~--~~~C~~-~~~~--~~~~ilG~~fl~~~y~vfD~~~~riGfa~~ 439 (446)
.+ ...|++ +... .+.||||+.|||++|+|||++++|||||+.
T Consensus 283 ~~~~~~~C~~~i~~~~~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 283 LEEGSSTCFGGLQSSSGIGINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp SSTTCSEEEESEEECTTTTSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred cCCCCCeEEEEEEcCCCCCcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 33 478987 5543 358999999999999999999999999974
No 19
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=6.1e-58 Score=455.13 Aligned_cols=303 Identities=17% Similarity=0.283 Sum_probs=257.6
Q ss_pred cccccce-ecCccEEEEEEECCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCccceecCCCCCCCCCCCC
Q 047238 85 DIHLPMA-KQDLFYSVEVNIGTPMKPQHLLFDTASSLVWTQCQPCIRCFDQTTPIFDPRASTTYSEIPCDDPLCRSPFKC 163 (446)
Q Consensus 85 ~~~~pl~-~~~~~Y~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~C 163 (446)
...+||. ..+.+|+++|.||||+|++.|+|||||+++||+|..|..+.|..++.|||++|+|++...
T Consensus 51 ~~~~pl~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~~------------ 118 (375)
T 1miq_A 51 NDVIELDDVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGCSIKNLYDSSKSKSYEKDG------------ 118 (375)
T ss_dssp TBCCCGGGTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCCSSGGGGSCCBCGGGCTTCEEEE------------
T ss_pred cceEEcccCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCCcccccCCCcCCCccCCceEECC------------
Confidence 4557888 578999999999999999999999999999999999975555778999999999999988
Q ss_pred CCCCceeeeeeCCCceEEEEEEEEEEEeecCCCccccccEEEEeeec----CCCCcCCCCcceeEecCCCCCc------h
Q 047238 164 QNGKCVYTRRYHVGDVTRGLASRETFAFPVRNGFTFVPRLAFGCSND----NSGFAFGGKISGILGFNASPLS------L 233 (446)
Q Consensus 164 ~~~~~~~~~~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~~fg~~~~----~~~~~~~~~~~GIlGLg~~~~s------~ 233 (446)
|.|.+.|++|+ +.|.+++|+|+|+ ++.+++ .|||++. +.. ......+||||||++..+ +
T Consensus 119 ----~~~~i~Yg~Gs-~~G~~~~Dtv~ig----~~~v~~-~Fg~~~~~~~~~~~-f~~~~~dGilGLg~~~~s~~~~~~~ 187 (375)
T 1miq_A 119 ----TKVDITYGSGT-VKGFFSKDLVTLG----HLSMPY-KFIEVTDTDDLEPI-YSSVEFDGILGLGWKDLSIGSIDPI 187 (375)
T ss_dssp ----EEEEEEETTEE-EEEEEEEEEEEET----TEEEEE-EEEEEEECGGGTTH-HHHSCCCEEEECSSCCTTCSSCCCH
T ss_pred ----cEEEEEeCCCe-EEEEEEEEEEEEc----CceECc-EEEEEEeccccccc-cccCCCceEEeCCCCcccccCCCCH
Confidence 88999999999 8999999999999 578889 9999998 432 101368999999998765 4
Q ss_pred hHhhhhh---ccCceEEeeecCCCCceeEEEccCC-ccCCCCceeeeeecCCCCCeEEEEeeeEEEecEEEeeCCCcccc
Q 047238 234 SSQLRNR---IQGLFSYCLVREMEATSVIKFGRDA-DVRRRDLETTPILLSDLRPHFYLHLLEISIGRHIVRFPPGAFDI 309 (446)
Q Consensus 234 ~~Ql~~~---~~~~Fs~~l~~~~~~~g~l~fGg~d-~~~~g~l~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~ 309 (446)
+.+|.++ ..++||+||.+.+...|.|+|||+| ++|.|++.|+|+.. ..+|.|.++ |+||++.+ .
T Consensus 188 ~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~w~v~l~-i~v~g~~~----~---- 255 (375)
T 1miq_A 188 VVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLNH---DLYWQIDLD-VHFGKQTM----E---- 255 (375)
T ss_dssp HHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBSS---SSSSEEEEE-EEETTEEE----E----
T ss_pred HHHHHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCceEEEecCC---CceEEEEEE-EEECCEEc----c----
Confidence 4555543 3799999999854468999999999 88999999999986 689999999 99999876 1
Q ss_pred ccCCCCcEEEeccCccccccchHHHHHHHHHHHHHhccCCCCCCCCCCCCCccccccCCCCCCcCeEEEEEcCeEEEEcC
Q 047238 310 MRDGTGGFIIDTGTPVTFIRNGPYQTLMQRYDQILRSLGRQRIPYNASQEFDYCYRYDSSFKAYPSMTFHLQEADYIVQP 389 (446)
Q Consensus 310 ~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~i~~~f~g~~~~l~~ 389 (446)
...+||||||++++||++++++|.+++++... . .. ..+.++|+. . .+|+|+|+|+|++|+||+
T Consensus 256 ----~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~--~--~~----g~~~~~C~~-~----~~P~i~f~f~g~~~~l~~ 318 (375)
T 1miq_A 256 ----KANVIVDSGTTTITAPSEFLNKFFANLNVIKV--P--FL----PFYVTTCDN-K----EMPTLEFKSANNTYTLEP 318 (375)
T ss_dssp ----EEEEEECTTBSSEEECHHHHHHHHHHHTCEEC--T--TS----SCEEEETTC-T----TCCCEEEECSSCEEEECG
T ss_pred ----cceEEecCCCccEEcCHHHHHHHHHHhCCccc--C--CC----CeEEEECCC-C----CCCcEEEEECCEEEEECH
Confidence 14699999999999999999999999865421 1 11 224589997 3 789999999999999999
Q ss_pred CCeEEEEcCC--CceEE-EEEcCC---CceeechhhhceeEEEEECCCCEEEEEeCC
Q 047238 390 ENMYFIEPDR--GRFCV-AIQDDP---KYSILGAWQQQNMLIIYDLNVPALRFGSEN 440 (446)
Q Consensus 390 ~~~y~~~~~~--~~~C~-~~~~~~---~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 440 (446)
++ |+++... ...|+ ++++.+ +.||||++|||++|+|||++++|||||+++
T Consensus 319 ~~-yi~~~~~~g~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 319 EY-YMNPILEVDDTLCMITMLPVDIDSNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp GG-SEEESSSSSCSEEEESEEECCSSSSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred HH-hEeeccCCCCCeEEEEEEECCCCCCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 99 9998753 45898 566544 689999999999999999999999999975
No 20
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=4.4e-58 Score=449.20 Aligned_cols=299 Identities=20% Similarity=0.256 Sum_probs=250.6
Q ss_pred ecCccEEEEEEECCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCccceecCCCCCCCCCCCCCCCCceee
Q 047238 92 KQDLFYSVEVNIGTPMKPQHLLFDTASSLVWTQCQPCIRCFDQTTPIFDPRASTTYSEIPCDDPLCRSPFKCQNGKCVYT 171 (446)
Q Consensus 92 ~~~~~Y~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~C~~~~~~~~ 171 (446)
..+.+|+++|.||||+|++.|+|||||+++||+|..|..|.| .++.|||++|+|++.+.| |.|.
T Consensus 12 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~-~~~~y~~~~SsT~~~~~~---------------~~~~ 75 (329)
T 1oew_A 12 SLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEV-XQTIYTPSKSTTAKLLSG---------------ATWS 75 (329)
T ss_dssp TTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCGGGC--CCCBCGGGCTTCEEEEE---------------EEEE
T ss_pred CCCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCCcccc-ccCccCCccCccceecCC---------------CeEE
Confidence 478899999999999999999999999999999999999988 889999999999999643 8899
Q ss_pred eeeCCCceEEEEEEEEEEEeecCCCccccccEEEEeeecCCCCcCC--CCcceeEecCCCCCc---------hhHhhhhh
Q 047238 172 RRYHVGDVTRGLASRETFAFPVRNGFTFVPRLAFGCSNDNSGFAFG--GKISGILGFNASPLS---------LSSQLRNR 240 (446)
Q Consensus 172 ~~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~~fg~~~~~~~~~~~--~~~~GIlGLg~~~~s---------~~~Ql~~~ 240 (446)
+.|++|+.+.|.+++|+|+|+ ++.++++.|||++...+ .++ ...+||||||++..+ +++||.++
T Consensus 76 i~Yg~Gs~~~G~~~~D~v~~g----~~~v~~~~fg~~~~~~~-~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~ 150 (329)
T 1oew_A 76 ISYGDGSSSSGDVYTDTVSVG----GLTVTGQAVESAKKVSS-SFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAKAS 150 (329)
T ss_dssp EECTTSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEECH-HHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHTTT
T ss_pred EEeCCCCcEEEEEEEEEEEEC----CEEEeeeEEEEEEecCc-cccccCCCceEEEeccccccccCcCCCCCHHHHHHHh
Confidence 999999989999999999999 57899999999998765 433 368999999997654 34555443
Q ss_pred -ccCceEEeeecCCCCceeEEEccCC-ccCCCCceeeeeecCCCCCeEEEEeeeEEEecEEEeeCCCccccccCCCCcEE
Q 047238 241 -IQGLFSYCLVREMEATSVIKFGRDA-DVRRRDLETTPILLSDLRPHFYLHLLEISIGRHIVRFPPGAFDIMRDGTGGFI 318 (446)
Q Consensus 241 -~~~~Fs~~l~~~~~~~g~l~fGg~d-~~~~g~l~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~i 318 (446)
..++||+||.+ ...|.|+|||+| ++|.|++.|+|+... ..+|.|.+++|+|+++.+... ...+|
T Consensus 151 i~~~~FS~~L~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~~v~l~~i~v~~~~~~~~----------~~~ai 216 (329)
T 1oew_A 151 LDSPVFTADLGY--HAPGTYNFGFIDTTAYTGSITYTAVSTK--QGFWEWTSTGYAVGSGTFKST----------SIDGI 216 (329)
T ss_dssp SSSSEEEEECCS--SSCEEEEESCCCTTSSSSCCEEEECBCT--TSSCEEEEEEEEETTSCCEEE----------EEEEE
T ss_pred ccCcEEEEEccC--CCCeEEEEeccChHhcccceEEEEccCC--CceEEEEEeeEEECCeeccCC----------CceEE
Confidence 37899999987 468999999999 889999999999852 479999999999999765411 14699
Q ss_pred EeccCccccccchHHHHHHHHHHHHHhccCCCCCCCCCCCCCccccccCCCCCCcCeEEEEEcCeEEEEcCCCeEEEEcC
Q 047238 319 IDTGTPVTFIRNGPYQTLMQRYDQILRSLGRQRIPYNASQEFDYCYRYDSSFKAYPSMTFHLQEADYIVQPENMYFIEPD 398 (446)
Q Consensus 319 iDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~i~~~f~g~~~~l~~~~~y~~~~~ 398 (446)
|||||++++||++++++|++++.+... .... ..+.++|+. .+|+|+|+|+|++++||+++ |+++..
T Consensus 217 iDSGTt~~~lP~~~~~~l~~~i~~a~~---~~~~----g~~~~~C~~------~~P~i~f~fgg~~~~ip~~~-~~~~~~ 282 (329)
T 1oew_A 217 ADTGTTLLYLPATVVSAYWAQVSGAKS---SSSV----GGYVFPCSA------TLPSFTFGVGSARIVIPGDY-IDFGPI 282 (329)
T ss_dssp ECTTCCSEEECHHHHHHHHTTSTTCEE---ETTT----TEEEEETTC------CCCCEEEEETTEEEEECHHH-HEEEES
T ss_pred EeCCCCCEECCHHHHHHHHHhCCCcEE---cCCC----CEEEEECCC------CCCcEEEEECCEEEEECHHH-eeeeec
Confidence 999999999999999999988743211 0111 223378983 68999999999999999999 888753
Q ss_pred C--CceEEE-EEcC--CCceeechhhhceeEEEEEC-CCCEEEEEeC
Q 047238 399 R--GRFCVA-IQDD--PKYSILGAWQQQNMLIIYDL-NVPALRFGSE 439 (446)
Q Consensus 399 ~--~~~C~~-~~~~--~~~~ilG~~fl~~~y~vfD~-~~~riGfa~~ 439 (446)
+ ...|++ +... .+.||||+.|||++|+|||+ +++|||||+.
T Consensus 283 ~~~~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 283 STGSSSCFGGIQSSAGIGINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp STTCSEEEESEEESTTTSSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred CCCCCeEEEEEEeCCCCCceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 2 468987 4443 36899999999999999999 9999999974
No 21
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=2.9e-58 Score=453.08 Aligned_cols=305 Identities=20% Similarity=0.330 Sum_probs=260.3
Q ss_pred ccccccce-ecCccEEEEEEECCCCceEEEEEEcCCCceeEeCCCCC----CCCCCCCCCCCCCCCCccceecCCCCCCC
Q 047238 84 EDIHLPMA-KQDLFYSVEVNIGTPMKPQHLLFDTASSLVWTQCQPCI----RCFDQTTPIFDPRASTTYSEIPCDDPLCR 158 (446)
Q Consensus 84 ~~~~~pl~-~~~~~Y~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~~~C~----~C~~~~~~~f~~~~SsT~~~~~c~~~~C~ 158 (446)
+.+.+||. ..+.+|+++|.||||+|++.|+|||||+++||+|..|. .| ..++.|+|++|+|++...
T Consensus 6 ~~~~~~l~n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C--~~~~~y~~~~SsT~~~~~------- 76 (341)
T 3k1w_A 6 TTSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTAC--VYHKLFDASDSSSYKHNG------- 76 (341)
T ss_dssp BCEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHH--HTSCCBCGGGCTTCEEEE-------
T ss_pred CCccccceEccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCcc--cCCCCCCCCcCcCeeECC-------
Confidence 35678998 67999999999999999999999999999999999997 45 578999999999999987
Q ss_pred CCCCCCCCCceeeeeeCCCceEEEEEEEEEEEeecCCCccccccEEEEeeecCCCCc-CC-CCcceeEecCCCCCc----
Q 047238 159 SPFKCQNGKCVYTRRYHVGDVTRGLASRETFAFPVRNGFTFVPRLAFGCSNDNSGFA-FG-GKISGILGFNASPLS---- 232 (446)
Q Consensus 159 ~~~~C~~~~~~~~~~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~~fg~~~~~~~~~-~~-~~~~GIlGLg~~~~s---- 232 (446)
|.|.+.|++|+ +.|.+++|+|+|+ ++.+ ++.|||++...+ . +. ...+||||||++..+
T Consensus 77 ---------~~~~i~Yg~gs-~~G~~~~D~v~ig----~~~v-~~~fg~~~~~~~-~~~~~~~~~GilGLg~~~~s~~~~ 140 (341)
T 3k1w_A 77 ---------TELTLRYSTGT-VSGFLSQDIITVG----GITV-TQMFGEVTEMPA-LPFMLAEFDGVVGMGFIEQAIGRV 140 (341)
T ss_dssp ---------EEEEEEETTEE-EEEEEEEEEEEET----TEEE-EEEEEEEEECCH-HHHTTCSSSEEEECSCGGGCGGGC
T ss_pred ---------CEEEEEECCcE-EEEEEEEEEEEEC----Ccee-eEEEEEEEEccc-cccccCCcceEEECCchhhcccCC
Confidence 88999999999 9999999999999 5778 999999998875 3 22 268999999998765
Q ss_pred --hhHhhhhh---ccCceEEeeecCC----CCceeEEEccCC-ccCCCCceeeeeecCCCCCeEEEEeeeEEEecEEEee
Q 047238 233 --LSSQLRNR---IQGLFSYCLVREM----EATSVIKFGRDA-DVRRRDLETTPILLSDLRPHFYLHLLEISIGRHIVRF 302 (446)
Q Consensus 233 --~~~Ql~~~---~~~~Fs~~l~~~~----~~~g~l~fGg~d-~~~~g~l~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~ 302 (446)
++.+|.++ ..++||+||.+.. ...|.|+|||+| ++|.|++.|+|+.. ..+|.|.+++|+|+++.+..
T Consensus 141 ~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~w~v~l~~i~v~~~~~~~ 217 (341)
T 3k1w_A 141 TPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIK---TGVWQIQMKGVSVGSSTLLC 217 (341)
T ss_dssp CCHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECSS---TTSCEEEECCEEETTEEEEC
T ss_pred CCHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecCC---CCEEEEEEeEEEECCEEeec
Confidence 45555543 4789999999853 348999999999 88999999999986 68999999999999987544
Q ss_pred CCCccccccCCCCcEEEeccCccccccchHHHHHHHHHHHHHhccCCCCCCCCCCCCCccccccCCCCCCcCeEEEEEcC
Q 047238 303 PPGAFDIMRDGTGGFIIDTGTPVTFIRNGPYQTLMQRYDQILRSLGRQRIPYNASQEFDYCYRYDSSFKAYPSMTFHLQE 382 (446)
Q Consensus 303 ~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~i~~~f~g 382 (446)
+.. ..+||||||++++||++++++|++++++... . ..+.++|.... .+|+|+|+|+|
T Consensus 218 ~~~---------~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~------~----~g~~~~C~~~~----~~p~i~f~f~g 274 (341)
T 3k1w_A 218 EDG---------CLALVDTGASYISGSTSSIEKLMEALGAKKR------L----FDYVVKCNEGP----TLPDISFHLGG 274 (341)
T ss_dssp TTC---------EEEEECTTCSSEEECHHHHHHHHHHHTCEEC------S----SCEEEEGGGGG----GCCCEEEEETT
T ss_pred CCC---------CEEEEECCCChhcCCHHHHHHHHHHcCCeec------C----CCeEEeCCCCC----cCCcEEEEECC
Confidence 332 5699999999999999999999999865421 1 22448999875 78999999999
Q ss_pred eEEEEcCCCeEEEEcCC--CceEEE-EEc------CCCceeechhhhceeEEEEECCCCEEEEEeCC
Q 047238 383 ADYIVQPENMYFIEPDR--GRFCVA-IQD------DPKYSILGAWQQQNMLIIYDLNVPALRFGSEN 440 (446)
Q Consensus 383 ~~~~l~~~~~y~~~~~~--~~~C~~-~~~------~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 440 (446)
++++||+++ |+++... +..|+. +.. ..+.||||++|||++|+|||++++|||||+++
T Consensus 275 ~~~~l~~~~-~~~~~~~~~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 275 KEYTLTSAD-YVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp EEEEECHHH-HBCCSCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEEECHHH-heeEccCCCCCeEEeEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 999999999 9987653 578985 544 13589999999999999999999999999986
No 22
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=1.3e-56 Score=457.43 Aligned_cols=313 Identities=18% Similarity=0.272 Sum_probs=256.5
Q ss_pred cccccce-ecCccEEEEEEECCCCceEEEEEEcCCCceeEeCCCCC---CCCCCCCCCCCCCCCCccceecCCCCCCCCC
Q 047238 85 DIHLPMA-KQDLFYSVEVNIGTPMKPQHLLFDTASSLVWTQCQPCI---RCFDQTTPIFDPRASTTYSEIPCDDPLCRSP 160 (446)
Q Consensus 85 ~~~~pl~-~~~~~Y~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~~~C~---~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~ 160 (446)
...+||. +.+.+|+++|.||||+|+|.|+|||||+++||+|..|. .| ..++.|||++|+|++..+
T Consensus 41 ~~~~~l~n~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~~~~C--~~~~~y~~~~SsT~~~~~--------- 109 (478)
T 1qdm_A 41 GDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIAC--YLHSRYKAGASSTYKKNG--------- 109 (478)
T ss_dssp SCSGGGCCGGGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCSCGGG--GGSCCBCGGGCTTCBCCC---------
T ss_pred CceEEeEeccCCEEEEEEEECCCCeEEEEEEcCCCcceEEecCCCCCCccc--cCCCCCCcccCCCeeeCC---------
Confidence 3558888 57899999999999999999999999999999999995 56 567899999999999887
Q ss_pred CCCCCCCceeeeeeCCCceEEEEEEEEEEEeecCCCccccccEEEEeeecCCCCcCC--CCcceeEecCCCCCch-----
Q 047238 161 FKCQNGKCVYTRRYHVGDVTRGLASRETFAFPVRNGFTFVPRLAFGCSNDNSGFAFG--GKISGILGFNASPLSL----- 233 (446)
Q Consensus 161 ~~C~~~~~~~~~~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~~fg~~~~~~~~~~~--~~~~GIlGLg~~~~s~----- 233 (446)
|.|.+.|++|+ +.|.+++|+|+|+ ++.++++.||+++...+ ..+ ..++||||||++..+.
T Consensus 110 -------~~~~i~Yg~Gs-~~G~~~~Dtv~ig----~~~v~~~~Fg~a~~~~~-~~f~~~~~dGIlGLg~~~~s~~~~~p 176 (478)
T 1qdm_A 110 -------KPAAIQYGTGS-IAGYFSEDSVTVG----DLVVKDQEFIEATKEPG-ITFLVAKFDGILGLGFKEISVGKAVP 176 (478)
T ss_dssp -------CEEEEEETTEE-EEEEEEEEEEEET----TEEEEEEEEEEEEECCB-SHHHHCSSSEEEECSCGGGCGGGCCC
T ss_pred -------cEEEEEcCCCC-eEEEEEEEEEEEC----CeEECCEEEEEEEecCC-cccccccccceecccccccccCCCCc
Confidence 78999999999 8999999999998 57899999999998765 322 3689999999988763
Q ss_pred -hHhhhhh---ccCceEEeeecC--CCCceeEEEccCC-ccCCCCceeeeeecCCCCCeEEEEeeeEEEecEEEeeCCCc
Q 047238 234 -SSQLRNR---IQGLFSYCLVRE--MEATSVIKFGRDA-DVRRRDLETTPILLSDLRPHFYLHLLEISIGRHIVRFPPGA 306 (446)
Q Consensus 234 -~~Ql~~~---~~~~Fs~~l~~~--~~~~g~l~fGg~d-~~~~g~l~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~ 306 (446)
..+|.++ ..++||+||.+. ....|.|+|||+| .+|.|++.|+|+.. ..+|.|.+++|+||++.+.+...
T Consensus 177 ~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~---~~~w~v~l~~i~v~g~~~~~~~~- 252 (478)
T 1qdm_A 177 VWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQ---KGYWQFDMGDVLVGGKSTGFCAG- 252 (478)
T ss_dssp HHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEE---ETTEEEEECCEEETTEECSTTTT-
T ss_pred HHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccC---CCeEEEEEeEEEECCEEEeecCC-
Confidence 3344432 378999999884 2468999999999 88999999999987 58999999999999987654322
Q ss_pred cccccCCCCcEEEeccCccccccchHHHHHHHHHHHHH----------------------------------hcc-----
Q 047238 307 FDIMRDGTGGFIIDTGTPVTFIRNGPYQTLMQRYDQIL----------------------------------RSL----- 347 (446)
Q Consensus 307 ~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~----------------------------------~~~----- 347 (446)
...+||||||++++||++++++|.+++++.. ++.
T Consensus 253 -------~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~iglC~~~~~ 325 (478)
T 1qdm_A 253 -------GCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDGT 325 (478)
T ss_dssp -------CEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC-----
T ss_pred -------CceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhccccccccCcc
Confidence 2579999999999999999999999885420 000
Q ss_pred -----------------------------------------------------------CCCCCCCCCCCCCccccccCC
Q 047238 348 -----------------------------------------------------------GRQRIPYNASQEFDYCYRYDS 368 (446)
Q Consensus 348 -----------------------------------------------------------~~~~~~~~~~~~~~~C~~~~~ 368 (446)
..... ...+.++|...+
T Consensus 326 ~~~~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~---~g~~~v~C~~~~- 401 (478)
T 1qdm_A 326 RGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSP---MGESAVDCGSLG- 401 (478)
T ss_dssp ----------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCS---SSCCEECGGGGT-
T ss_pred ccccccccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCC---CCeEEeeccccc-
Confidence 00000 022347888765
Q ss_pred CCCCcCeEEEEEcCeEEEEcCCCeEEEEcCC--CceEEE-EEc------CCCceeechhhhceeEEEEECCCCEEEEEeC
Q 047238 369 SFKAYPSMTFHLQEADYIVQPENMYFIEPDR--GRFCVA-IQD------DPKYSILGAWQQQNMLIIYDLNVPALRFGSE 439 (446)
Q Consensus 369 ~~~~~p~i~~~f~g~~~~l~~~~~y~~~~~~--~~~C~~-~~~------~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~ 439 (446)
.+|+|+|+|+|++|+|+|++ |+++... ...|++ +.. .++.||||+.|||++|+|||++++|||||++
T Consensus 402 ---~lP~i~f~~gg~~~~l~p~~-yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~rIGfA~a 477 (478)
T 1qdm_A 402 ---SMPDIEFTIGGKKFALKPEE-YILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKA 477 (478)
T ss_dssp ---TCCCEEEEETTEEEEECHHH-HEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred ---ccccEEEEECCEEEEEChHH-hEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCEEEEEeC
Confidence 89999999999999999999 9998765 358986 542 2357999999999999999999999999986
Q ss_pred C
Q 047238 440 N 440 (446)
Q Consensus 440 ~ 440 (446)
.
T Consensus 478 ~ 478 (478)
T 1qdm_A 478 A 478 (478)
T ss_dssp C
T ss_pred C
Confidence 3
No 23
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=1.1e-56 Score=439.44 Aligned_cols=304 Identities=15% Similarity=0.226 Sum_probs=257.3
Q ss_pred cccccce-ecCccEEEEEEECCCCceEEEEEEcCCCceeEeCCCCC--CCCCCCCCCCCCCCCCccceecCCCCCCCCCC
Q 047238 85 DIHLPMA-KQDLFYSVEVNIGTPMKPQHLLFDTASSLVWTQCQPCI--RCFDQTTPIFDPRASTTYSEIPCDDPLCRSPF 161 (446)
Q Consensus 85 ~~~~pl~-~~~~~Y~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~~~C~--~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~ 161 (446)
.+..||. ..+.+|+++|.|| +|++.|+|||||+++||+|..|. .|.+..++.|||++| |++..+
T Consensus 6 ~~~~~l~n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~~~y~~~~S-T~~~~~---------- 72 (330)
T 1yg9_A 6 PLYKLVHVFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECVGGACVCPNLQKYEKLKP-KYISDG---------- 72 (330)
T ss_dssp CSCSCEEEEECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCCSGGGGSTTCCCCCCSSC-EEEEEE----------
T ss_pred eeEeeeecCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCCccCcccccCccCCCCC-ceEECC----------
Confidence 4567888 5789999999999 89999999999999999999996 575577899999999 999887
Q ss_pred CCCCCCceeeeeeCCCceEEEEEEEEEEEeecCCCccccccEEEEeeecCCCCcCC-CCcceeEecCCCCCc-------h
Q 047238 162 KCQNGKCVYTRRYHVGDVTRGLASRETFAFPVRNGFTFVPRLAFGCSNDNSGFAFG-GKISGILGFNASPLS-------L 233 (446)
Q Consensus 162 ~C~~~~~~~~~~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~~fg~~~~~~~~~~~-~~~~GIlGLg~~~~s-------~ 233 (446)
+.|.+.|++|+ +.|.+++|+|+|+ ++.++++.|||++.... .+. ...+||||||++..+ +
T Consensus 73 ------~~~~i~Yg~Gs-~~G~~~~Dtv~ig----~~~~~~~~fg~~~~~~~-~f~~~~~~GilGLg~~~~s~~~~~~~~ 140 (330)
T 1yg9_A 73 ------NVQVKFFDTGS-AVGRGIEDSLTIS----QLTTSQQDIVLADELSQ-EVCILSADVVVGIAAPGCPNALKGKTV 140 (330)
T ss_dssp ------EEEEEETTTEE-EEEEEEEEEEEET----TEEEEEEEEEEEEEECT-HHHHTTCSEEEECSCTTSCCTTSCCCH
T ss_pred ------CEEEEEECCce-EEEEEEEEEEEEC----CEEEcCeEEEEEEEccc-ccccccCceEEEcCcchhccccCCCCH
Confidence 88999999999 6999999999999 57899999999998743 221 268999999998876 5
Q ss_pred hHhhhhh--ccCceEEeeecCCC--CceeEEEccCC-ccCCCCceeeeeecCCCCCeEEEEeeeEEEecEEEeeCCCccc
Q 047238 234 SSQLRNR--IQGLFSYCLVREME--ATSVIKFGRDA-DVRRRDLETTPILLSDLRPHFYLHLLEISIGRHIVRFPPGAFD 308 (446)
Q Consensus 234 ~~Ql~~~--~~~~Fs~~l~~~~~--~~g~l~fGg~d-~~~~g~l~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~ 308 (446)
++||.++ ..++||+||.+... ..|.|+|||+| ++|.|++.|+|+.. ..+|.|.+++|+|+++.+. ..
T Consensus 141 ~~~l~~qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~w~v~l~~i~v~~~~~~-~~---- 212 (330)
T 1yg9_A 141 LENFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVG---DDSWKFRLDGVKIGDTTVA-PA---- 212 (330)
T ss_dssp HHHHHHTTSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBSC---TTSCCEECSEEEETTEEEE-CT----
T ss_pred HHHHHhcCCCCceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECCC---CCEEEEEeCeEEECCEEEc-CC----
Confidence 6676543 37999999998532 38999999999 88999999999986 6899999999999998765 11
Q ss_pred cccCCCCcEEEeccCccccccchHHHHHHHHHHHHHhccCCCCCCCCCCCC-CccccccCCCCCCcCeEEEEEcCeEEEE
Q 047238 309 IMRDGTGGFIIDTGTPVTFIRNGPYQTLMQRYDQILRSLGRQRIPYNASQE-FDYCYRYDSSFKAYPSMTFHLQEADYIV 387 (446)
Q Consensus 309 ~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~-~~~C~~~~~~~~~~p~i~~~f~g~~~~l 387 (446)
...+||||||++++||++++++|++++++.... .+. ..+ .++|+... .+|+|+|+|+|++++|
T Consensus 213 -----~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~~---~g~----~~~~~~~C~~~~----~~p~i~f~fgg~~~~l 276 (330)
T 1yg9_A 213 -----GTQAIIDTSKAIIVGPKAYVNPINEAIGCVVEK---TTT----RRICKLDCSKIP----SLPDVTFVINGRNFNI 276 (330)
T ss_dssp -----TCEEEECTTCSSEEEEHHHHHHHHHHHTCEEEE---CSS----CEEEEECGGGGG----GSCCEEEEETTEEEEE
T ss_pred -----CcEEEEecCCccccCCHHHHHHHHHHhCCcccC---CCc----eEEEEEECCCcc----ccCcEEEEECCEEEEE
Confidence 257999999999999999999999998654210 110 034 57899765 7899999999999999
Q ss_pred cCCCeEEEEcCCCceEEE-EEc--CCCceeechhhhceeEEEEECCCCEEEEEeCC
Q 047238 388 QPENMYFIEPDRGRFCVA-IQD--DPKYSILGAWQQQNMLIIYDLNVPALRFGSEN 440 (446)
Q Consensus 388 ~~~~~y~~~~~~~~~C~~-~~~--~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 440 (446)
|+++ |+++. +..|+. +.. .++.||||+.|||++|+|||++++|||||+++
T Consensus 277 ~~~~-y~~~~--~~~C~~~i~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 277 SSQY-YIQQN--GNLCYSGFQPCGHSDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp CHHH-HEEEE--TTEEEESEEEETTCSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CHHH-hcccC--CCcEEEEEEeCCCCCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 9999 99987 467985 543 34689999999999999999999999999874
No 24
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=9.9e-57 Score=454.34 Aligned_cols=304 Identities=17% Similarity=0.242 Sum_probs=255.8
Q ss_pred ccccccce-ecCccEEEEEEECCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCccceecCCCCCCCCCCC
Q 047238 84 EDIHLPMA-KQDLFYSVEVNIGTPMKPQHLLFDTASSLVWTQCQPCIRCFDQTTPIFDPRASTTYSEIPCDDPLCRSPFK 162 (446)
Q Consensus 84 ~~~~~pl~-~~~~~Y~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~ 162 (446)
....+||. ..+.+|+++|+||||||++.|++||||+++||+|..|....|..++.|||++|+|++..+
T Consensus 125 ~~~~~pL~n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~s~~C~~~~~ydps~SsT~~~~~----------- 193 (451)
T 3qvc_A 125 EFDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESCESKNHYDSSKSKTYEKDD----------- 193 (451)
T ss_dssp --CCCCGGGGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCCSGGGTTSCCBCGGGCTTCEEEE-----------
T ss_pred cCCccceeecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCccccCCCCCCCCCCCcccccCC-----------
Confidence 35568888 578999999999999999999999999999999999954344778999999999999987
Q ss_pred CCCCCceeeeeeCCCceEEEEEEEEEEEeecCCCccccccEEEEeeec----CCCCcCCCCcceeEecCCCCCc------
Q 047238 163 CQNGKCVYTRRYHVGDVTRGLASRETFAFPVRNGFTFVPRLAFGCSND----NSGFAFGGKISGILGFNASPLS------ 232 (446)
Q Consensus 163 C~~~~~~~~~~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~~fg~~~~----~~~~~~~~~~~GIlGLg~~~~s------ 232 (446)
|.|.+.|++|+ +.|.+++|+|+|+ ++.++ +.|||++. ..+ ......+||||||++..+
T Consensus 194 -----~~f~i~YgdGs-~~G~~~~Dtv~ig----g~~v~-~~Fg~a~~t~~~~~~-f~~~~~dGILGLg~~~~s~~~~~~ 261 (451)
T 3qvc_A 194 -----TPVKLTSKAGT-ISGIFSKDLVTIG----KLSVP-YKFIEMTEIVGFEPF-YSESDVDGVFGLGWKDLSIGSIDP 261 (451)
T ss_dssp -----EEEEEECSSEE-EEEEEEEEEEEET----TEEEE-EEEEEEEEEEECTTH-HHHSCCCEEEECSSBCSSSSCCCC
T ss_pred -----CEEEEEECCCE-EEEEEEEEEEEEC----CEEEE-EEEEEEEeccccCCC-ccCCCCCEEEecCCCcccccCCCC
Confidence 88999999999 9999999999999 57888 99999988 543 112368999999998754
Q ss_pred hhHhhhhh---ccCceEEeeecCCCCceeEEEccCC-ccCCCCceeeeeecCCCCCeEEEEeeeEEEecEEEeeCCCccc
Q 047238 233 LSSQLRNR---IQGLFSYCLVREMEATSVIKFGRDA-DVRRRDLETTPILLSDLRPHFYLHLLEISIGRHIVRFPPGAFD 308 (446)
Q Consensus 233 ~~~Ql~~~---~~~~Fs~~l~~~~~~~g~l~fGg~d-~~~~g~l~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~ 308 (446)
++.+|.++ ..++||+||.+.....|.|+|||+| +++.|++.|+|+.. ..+|.|.++ |+|+++ ...
T Consensus 262 ~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~l~~~pv~~---~~~w~v~l~-I~Vgg~-~~~------ 330 (451)
T 3qvc_A 262 YIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGPLNYEKLNH---DLMWQVDLD-VHFGNV-SSK------ 330 (451)
T ss_dssp HHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEECSS---TTSSEEEEE-EEETTE-EEE------
T ss_pred HHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCceEEEEccc---CCeeEEEEE-EEECCc-cCC------
Confidence 55666543 4789999999965668999999999 88999999999986 689999999 999988 111
Q ss_pred cccCCCCcEEEeccCccccccchHHHHHHHHHHHHHhccCCCCCCCCCCCCCccccccCCCCCCcCeEEEEEcCeEEEEc
Q 047238 309 IMRDGTGGFIIDTGTPVTFIRNGPYQTLMQRYDQILRSLGRQRIPYNASQEFDYCYRYDSSFKAYPSMTFHLQEADYIVQ 388 (446)
Q Consensus 309 ~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~i~~~f~g~~~~l~ 388 (446)
...++|||||++++||++++++|.+++++... ... ..+.++|. .. .+|+|+|+|+|.+++||
T Consensus 331 -----~~~aiiDSGTt~i~lP~~~~~~i~~~i~a~~~----~~~----g~y~v~C~-~~----~~P~itf~fgg~~i~lp 392 (451)
T 3qvc_A 331 -----KANVILDSATSVITVPTEFFNQFVESASVFKV----PFL----SLYVTTCG-NT----KLPTLEYRSPNKVYTLE 392 (451)
T ss_dssp -----EEEEEECTTBSSEEECHHHHHHHHTTTTCEEC----TTS----SCEEEETT-CT----TCCCEEEEETTEEEEEC
T ss_pred -----CceEEEeCCCccccCCHHHHHHHHHHcCCeec----CCC----CeEEeeCC-cC----cCCcEEEEECCEEEEEc
Confidence 14699999999999999999999999865421 111 23448998 44 88999999999999999
Q ss_pred CCCeEEEEcCC--CceEEE-EEcC---CCceeechhhhceeEEEEECCCCEEEEEeCC
Q 047238 389 PENMYFIEPDR--GRFCVA-IQDD---PKYSILGAWQQQNMLIIYDLNVPALRFGSEN 440 (446)
Q Consensus 389 ~~~~y~~~~~~--~~~C~~-~~~~---~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 440 (446)
+++ |+++..+ +..|+. +.+. .+.||||++|||++|+|||++++|||||+++
T Consensus 393 ~~~-yi~~~~~~~~~~C~~~i~~~~~~~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 393 PKQ-YLEPLENIFSALCMLNIVPIDLEKNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp HHH-HEEECTTTSTTEEEECEEECCCSTTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred HHH-heeecccCCCCeEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 999 9998653 578985 5543 3579999999999999999999999999975
No 25
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=2.3e-56 Score=436.33 Aligned_cols=297 Identities=19% Similarity=0.223 Sum_probs=249.0
Q ss_pred ecCccEEEEEEECCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCccceecCCCCCCCCCCCCCCCCceee
Q 047238 92 KQDLFYSVEVNIGTPMKPQHLLFDTASSLVWTQCQPCIRCFDQTTPIFDPRASTTYSEIPCDDPLCRSPFKCQNGKCVYT 171 (446)
Q Consensus 92 ~~~~~Y~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~C~~~~~~~~ 171 (446)
..+.+|+++|.|| +|++.|+|||||+++||+|..|..|.|+.++.|||++|+ ++... |.|.
T Consensus 11 ~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~~~----------------~~~~ 71 (325)
T 1ibq_A 11 NNDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELPSSEQTGHDLYTPSSSA-TKLSG----------------YSWD 71 (325)
T ss_dssp TTTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSCHHHHTTSCCCBCCSSC-EECTT----------------CBEE
T ss_pred CCCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCCccccCCCCCCCchhcC-CccCC----------------CEEE
Confidence 4788999999999 899999999999999999999999988899999999998 54434 7899
Q ss_pred eeeCCCceEEEEEEEEEEEeecCCCccccccEEEEeeecCCCCcCC--CCcceeEecCCCCCc---------hhHhhhhh
Q 047238 172 RRYHVGDVTRGLASRETFAFPVRNGFTFVPRLAFGCSNDNSGFAFG--GKISGILGFNASPLS---------LSSQLRNR 240 (446)
Q Consensus 172 ~~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~~fg~~~~~~~~~~~--~~~~GIlGLg~~~~s---------~~~Ql~~~ 240 (446)
+.|++|+.+.|.+++|+|+|+ ++.++++.|||++...+ .++ ...+||||||++..+ +++||.++
T Consensus 72 i~Yg~Gs~~~G~~~~D~v~ig----~~~v~~~~fg~~~~~~~-~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~ 146 (325)
T 1ibq_A 72 ISYGDGSSASGDVYRDTVTVG----GVTTNKQAVEAASKISS-EFVQDTANDGLLGLAFSSINTVQPKAQTTFFDTVKSQ 146 (325)
T ss_dssp EECSSSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEECH-HHHTSTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG
T ss_pred EEeCCCCEEEEEEEEeEEEEC----CEEEcceEEEEEEecCc-cccccCCCceEEEeCcccccccCcCCCCCHHHHHHHh
Confidence 999999989999999999999 57899999999998765 433 368999999997654 34666543
Q ss_pred -ccCceEEeeecCCCCceeEEEccCC-ccCCCCceeeeeecCCCCCeEEEEeeeEEEecEEEeeCCCccccccCCCCcEE
Q 047238 241 -IQGLFSYCLVREMEATSVIKFGRDA-DVRRRDLETTPILLSDLRPHFYLHLLEISIGRHIVRFPPGAFDIMRDGTGGFI 318 (446)
Q Consensus 241 -~~~~Fs~~l~~~~~~~g~l~fGg~d-~~~~g~l~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~i 318 (446)
..++||+||.+ ...|.|+|||+| ++|.|++.|+|+... ..+|.|.+++|+|+++.+.. . ...+|
T Consensus 147 i~~~~FS~~l~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~w~v~l~~i~v~~~~~~~--~--------~~~ai 212 (325)
T 1ibq_A 147 LDSPLFAVQLKH--DAPGVYDFGYIDDSKYTGSITYTDADSS--QGYWGFSTDGYSIGDGSSSS--S--------GFSAI 212 (325)
T ss_dssp SSSSEEEEEEET--TEEEEEEESSCCGGGBSSCCEEEECBCT--TSSCEEEECEEEETTSCCBS--C--------CEEEE
T ss_pred cCCcEEEEEecC--CCCceEEECCcChhhccCceEEEEcCCC--CceEEEEECcEEECCeeccC--C--------CceEE
Confidence 47899999998 368999999999 889999999999852 47999999999999976531 1 25699
Q ss_pred EeccCccccccchHHHHHHHHHHHHHhccCCCCCCCCCCCCCccccccCCCCCCcCeEEEEEcCeEEEEcCCCeEEEEcC
Q 047238 319 IDTGTPVTFIRNGPYQTLMQRYDQILRSLGRQRIPYNASQEFDYCYRYDSSFKAYPSMTFHLQEADYIVQPENMYFIEPD 398 (446)
Q Consensus 319 iDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~i~~~f~g~~~~l~~~~~y~~~~~ 398 (446)
|||||++++||++++++|++++.+.. ..... ..+.++|+. .+|+|+|+|+|++++||+++ |+++..
T Consensus 213 iDSGTt~~~lP~~~~~~i~~~i~~a~---~~~~~----g~~~~~C~~------~~P~i~f~fgg~~~~i~~~~-~~~~~~ 278 (325)
T 1ibq_A 213 ADTGTTLILLDDEIVSAYYEQVSGAQ---ESYEA----GGYVFSCST------DLPDFTVVIGDYKAVVPGKY-INYAPV 278 (325)
T ss_dssp ECTTCCSEEECHHHHHHHHTTSTTCB---CCSSS----SSCEEETTC------CCCCEEEEETTEEEEECHHH-HEEEES
T ss_pred EeCCCCcEeCCHHHHHHHHHhCCCce---EcCcC----CeEEEEcCC------CCCcEEEEECCEEEEECHHH-hccccc
Confidence 99999999999999999999884321 11111 223478983 68999999999999999999 888753
Q ss_pred C--CceEEE-EEcC--CCceeechhhhceeEEEEECCCCEEEEEeCC
Q 047238 399 R--GRFCVA-IQDD--PKYSILGAWQQQNMLIIYDLNVPALRFGSEN 440 (446)
Q Consensus 399 ~--~~~C~~-~~~~--~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 440 (446)
+ ...|++ +... .+.||||++|||++|+|||++++|||||+++
T Consensus 279 ~~~~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 325 (325)
T 1ibq_A 279 STGSSTCYGGIQSNSGLGLSILGDVFLKSQYVVFNSEGPKLGFAAQA 325 (325)
T ss_dssp STTCSEEEESEEECTTTCSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CCCCCeEEEEEEcCCCCCceEEChHHhcCEEEEEECCCCEEEeeeCC
Confidence 3 368987 5443 3689999999999999999999999999864
No 26
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=1.6e-56 Score=436.91 Aligned_cols=296 Identities=17% Similarity=0.193 Sum_probs=248.5
Q ss_pred ecCccEEEEEEECCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCccceecCCCCCCCCCCCCCCCCceee
Q 047238 92 KQDLFYSVEVNIGTPMKPQHLLFDTASSLVWTQCQPCIRCFDQTTPIFDPRASTTYSEIPCDDPLCRSPFKCQNGKCVYT 171 (446)
Q Consensus 92 ~~~~~Y~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~C~~~~~~~~ 171 (446)
..+.+|+++|.|| +|++.|+|||||+++||+|..|..|.|+.++.|||++|+ ++... |.|.
T Consensus 12 ~~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~~~----------------~~~~ 72 (323)
T 1izd_A 12 SNDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTPSSERSGHDYYTPGSSA-QKIDG----------------ATWS 72 (323)
T ss_dssp GGGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHTTCCCBCCCTTC-EEEEE----------------EEEE
T ss_pred CCCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCCcccccCCCCCCccccC-CccCC----------------CeEE
Confidence 4788999999999 899999999999999999999999988899999999999 66555 8899
Q ss_pred eeeCCCceEEEEEEEEEEEeecCCCccccccEEEEeeecCCCCcCC--CCcceeEecCCCCCc---------hhHhhhhh
Q 047238 172 RRYHVGDVTRGLASRETFAFPVRNGFTFVPRLAFGCSNDNSGFAFG--GKISGILGFNASPLS---------LSSQLRNR 240 (446)
Q Consensus 172 ~~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~~fg~~~~~~~~~~~--~~~~GIlGLg~~~~s---------~~~Ql~~~ 240 (446)
+.|++|+.+.|.+++|+|+|+ ++.++++.|||++...+ .++ ...+||||||++..+ +.++|.++
T Consensus 73 i~Yg~Gs~~~G~~~~D~v~ig----~~~v~~~~fg~~~~~~~-~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~ 147 (323)
T 1izd_A 73 ISYGDGSSASGDVYKDKVTVG----GVSYDSQAVESAEKVSS-EFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNVKSS 147 (323)
T ss_dssp EECTTSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEECH-HHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG
T ss_pred EEcCCCCeEEEEEEEEEEEEC----CEEECceEEEEEEeccc-cccccCCCceEEecCcccccccCCCCCCCHHHHHHHh
Confidence 999999989999999999999 57899999999998765 433 368999999997655 34455433
Q ss_pred -ccCceEEeeecCCCCceeEEEccCC-ccCCCCceeeeeecCCCCCeEEEEeeeEEEecEEEeeCCCccccccCCCCcEE
Q 047238 241 -IQGLFSYCLVREMEATSVIKFGRDA-DVRRRDLETTPILLSDLRPHFYLHLLEISIGRHIVRFPPGAFDIMRDGTGGFI 318 (446)
Q Consensus 241 -~~~~Fs~~l~~~~~~~g~l~fGg~d-~~~~g~l~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~i 318 (446)
..++||+||.+ ...|.|+|||+| ++|.|++.|+|+... ..+|.|.+++|+|++ .+. .. ...+|
T Consensus 148 i~~~~FS~~L~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~w~v~l~~i~v~~-~~~--~~--------~~~ai 212 (323)
T 1izd_A 148 LSEPIFAVALKH--NAPGVYDFGYTDSSKYTGSITYTDVDNS--QGFWGFTADGYSIGS-DSS--SD--------SITGI 212 (323)
T ss_dssp SSSSEEEEECCT--TSCEEEEESSCCTTSEEEEEEEEECBCT--TSSCEEEESEEEETT-EEE--CC--------CEEEE
T ss_pred ccCcEEEEEccC--CCCCEEEECCcCccccccceEEEECCCC--CceEEEEECeEEECC-ccc--CC--------CceEE
Confidence 47999999987 368999999999 889999999999852 479999999999999 543 11 14699
Q ss_pred EeccCccccccchHHHHHHHHHHHHHhccCCCCCCCCCCCCCccccccCCCCCCcCeEEEEEcCeEEEEcCCCeEEEEcC
Q 047238 319 IDTGTPVTFIRNGPYQTLMQRYDQILRSLGRQRIPYNASQEFDYCYRYDSSFKAYPSMTFHLQEADYIVQPENMYFIEPD 398 (446)
Q Consensus 319 iDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~i~~~f~g~~~~l~~~~~y~~~~~ 398 (446)
|||||++++||++++++|++++.+... .... ..+.++|+. .+|+|+|+|+|++++||+++ |+++..
T Consensus 213 iDSGTs~~~lp~~~~~~i~~~i~ga~~---~~~~----g~~~~~C~~------~~P~i~f~fgg~~~~i~~~~-~~~~~~ 278 (323)
T 1izd_A 213 ADTGTTLLLLDDSIVDAYYEQVNGASY---DSSQ----GGYVFPSSA------SLPDFSVTIGDYTATVPGEY-ISFADV 278 (323)
T ss_dssp ECTTCCSEEECHHHHHHHHTTSTTCEE---ETTT----TEEEEETTC------CCCCEEEEETTEEEEECHHH-HEEEEC
T ss_pred EeCCCcceeCCHHHHHHHHHhCCCcEE---cCcC----CEEEEECCC------CCceEEEEECCEEEecCHHH-eEEecC
Confidence 999999999999999999998843210 0011 223478983 78999999999999999999 898765
Q ss_pred CCceEEE-EEcC--CCceeechhhhceeEEEEECCCCEEEEEeCC
Q 047238 399 RGRFCVA-IQDD--PKYSILGAWQQQNMLIIYDLNVPALRFGSEN 440 (446)
Q Consensus 399 ~~~~C~~-~~~~--~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 440 (446)
++..|++ +... .+.||||+.|||++|+|||++++|||||+++
T Consensus 279 ~~~~C~~~i~~~~~~~~~IlG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1izd_A 279 GNGQTFGGIQSNSGIGFSIFGDVFLKSQYVVFDASGPRLGFAAQA 323 (323)
T ss_dssp STTEEEESEEECTTTSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CCCeEEEEEEcCCCCCcEEEChHHhcCEEEEEECCCCEEEEeeCC
Confidence 5678987 5543 3689999999999999999999999999863
No 27
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=1.8e-55 Score=439.95 Aligned_cols=321 Identities=18% Similarity=0.271 Sum_probs=253.3
Q ss_pred ccce-ecCccEEEEEEECCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCccceecCCCCCCCCCCCCCCC
Q 047238 88 LPMA-KQDLFYSVEVNIGTPMKPQHLLFDTASSLVWTQCQPCIRCFDQTTPIFDPRASTTYSEIPCDDPLCRSPFKCQNG 166 (446)
Q Consensus 88 ~pl~-~~~~~Y~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~C~~~ 166 (446)
.+|. ..+..|+++|.||||+|++.|+|||||+++||+|..|..| ++.|||++|+|++...
T Consensus 5 ~~l~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~~----~~~f~~~~SsT~~~~~--------------- 65 (383)
T 2ewy_A 5 DNLQGDSGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSYI----DTYFDTERSSTYRSKG--------------- 65 (383)
T ss_dssp TCEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBTTB----SCCCCGGGCTTCEEEE---------------
T ss_pred eeccCCCCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCCcc----ccCcccccCccceeCC---------------
Confidence 4566 5677899999999999999999999999999999988665 6789999999999988
Q ss_pred CceeeeeeCCCceEEEEEEEEEEEeecCCCccccccEEEEeeecCCCCcCC--CCcceeEecCCCCCc--------hhHh
Q 047238 167 KCVYTRRYHVGDVTRGLASRETFAFPVRNGFTFVPRLAFGCSNDNSGFAFG--GKISGILGFNASPLS--------LSSQ 236 (446)
Q Consensus 167 ~~~~~~~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~~fg~~~~~~~~~~~--~~~~GIlGLg~~~~s--------~~~Q 236 (446)
|.|.+.|++|+ +.|.+++|+|+|++. ......+.|++.....+ .+. ...+||||||++..+ ++.+
T Consensus 66 -~~~~i~Yg~Gs-~~G~~~~Dtv~i~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~ 140 (383)
T 2ewy_A 66 -FDVTVKYTQGS-WTGFVGEDLVTIPKG--FNTSFLVNIATIFESEN-FFLPGIKWNGILGLAYATLAKPSSSLETFFDS 140 (383)
T ss_dssp -EEEEEECSSCE-EEEEEEEEEEEETTT--EEEEEEEEEEEEEEEES-CSCTTCCCCEEEECSCGGGCSSCTTSCCHHHH
T ss_pred -ceEEEEECCcE-EEEEEEEEEEEECCC--ccceeEEEEEEEEeecc-eeeccCcCceEEecCchhcccccccccCHHHH
Confidence 88999999999 799999999999842 11112467888766554 322 268999999997654 3334
Q ss_pred hhhh--ccCceEEeeec-------CCCCceeEEEccCC-ccCCCCceeeeeecCCCCCeEEEEeeeEEEecEEEeeCCCc
Q 047238 237 LRNR--IQGLFSYCLVR-------EMEATSVIKFGRDA-DVRRRDLETTPILLSDLRPHFYLHLLEISIGRHIVRFPPGA 306 (446)
Q Consensus 237 l~~~--~~~~Fs~~l~~-------~~~~~g~l~fGg~d-~~~~g~l~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~ 306 (446)
|.++ ..++||+||.+ .....|.|+|||+| ++|.|++.|+|+.. ..+|.|.+++|+|+++.+.++...
T Consensus 141 l~~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~~~v~l~~i~v~g~~~~~~~~~ 217 (383)
T 2ewy_A 141 LVTQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKE---EWYYQIEILKLEIGGQSLNLDCRE 217 (383)
T ss_dssp HHHHHTCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECSS---BTTBBCCEEEEEETTEECCCCTTT
T ss_pred HHHccCCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecCC---CceEEEEEEEEEECCEEccccccc
Confidence 4432 35899999963 23468999999999 88999999999987 579999999999999988765443
Q ss_pred cccccCCCCcEEEeccCccccccchHHHHHHHHHHHHHhccCCCCCCCCCCCCCccccccCCC-CCCcCeEEEEEcCe--
Q 047238 307 FDIMRDGTGGFIIDTGTPVTFIRNGPYQTLMQRYDQILRSLGRQRIPYNASQEFDYCYRYDSS-FKAYPSMTFHLQEA-- 383 (446)
Q Consensus 307 ~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~-~~~~p~i~~~f~g~-- 383 (446)
+. ...+||||||++++||++++++|++++.+....+......+ ..+.++|+..... ...+|+|+|+|+|.
T Consensus 218 ~~-----~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~--~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~ 290 (383)
T 2ewy_A 218 YN-----ADKAIVDSGTTLLRLPQKVFDAVVEAVARASLIPEFSDGFW--TGSQLACWTNSETPWSYFPKISIYLRDENS 290 (383)
T ss_dssp TT-----SSCEEECTTCSSEEEEHHHHHHHHHHHHHTTCSSCCCHHHH--HTSEEEEECSSSCGGGGSCCEEEEEECSST
T ss_pred cC-----CccEEEEcCCccccCCHHHHHHHHHHHhhhcccccCccccc--cccccccccCCcccHhhCCcEEEEECCCCC
Confidence 21 25799999999999999999999999988743211110000 0124799876422 23689999999874
Q ss_pred ----EEEEcCCCeEEEEcC---CCceEEEE--EcCCCceeechhhhceeEEEEECCCCEEEEEeCCCCC
Q 047238 384 ----DYIVQPENMYFIEPD---RGRFCVAI--QDDPKYSILGAWQQQNMLIIYDLNVPALRFGSENCAN 443 (446)
Q Consensus 384 ----~~~l~~~~~y~~~~~---~~~~C~~~--~~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~c~~ 443 (446)
+++|++++ |+.+.. .+..|+++ .+..+.||||+.|||++|+|||++++|||||+++|..
T Consensus 291 ~~~~~~~l~~~~-yi~~~~~~~~~~~C~~~~i~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~ 358 (383)
T 2ewy_A 291 SRSFRITILPQL-YIQPMMGAGLNYECYRFGISPSTNALVIGATVMEGFYVIFDRAQKRVGFAASPCAE 358 (383)
T ss_dssp TEEEEEEECHHH-HEEEECCCTTCSEEEEESEEEESSCEEECHHHHTTEEEEEETTTTEEEEEECTTCB
T ss_pred CceEEEEEChHH-heeecccCCCCceeEEEEecCCCCcEEEChHHhCCeeEEEECCCCeEEEEeccCCC
Confidence 79999999 998864 25679863 4445689999999999999999999999999999974
No 28
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=2.5e-55 Score=447.87 Aligned_cols=321 Identities=17% Similarity=0.250 Sum_probs=257.7
Q ss_pred ccce-ecCccEEEEEEECCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCccceecCCCCCCCCCCCCCCC
Q 047238 88 LPMA-KQDLFYSVEVNIGTPMKPQHLLFDTASSLVWTQCQPCIRCFDQTTPIFDPRASTTYSEIPCDDPLCRSPFKCQNG 166 (446)
Q Consensus 88 ~pl~-~~~~~Y~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~C~~~ 166 (446)
..|. ..+..|+++|.||||+|+|.|+|||||+++||+|..| | ..++.|||++|+|++...
T Consensus 66 ~~l~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c--c--~~~~~y~~~~SsT~~~~~--------------- 126 (455)
T 3lpj_A 66 DNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--P--FLHRYYQRQLSSTYRDLR--------------- 126 (455)
T ss_dssp TCEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--T--TCSCCCCGGGCTTCEEEE---------------
T ss_pred ccccCCCCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc--c--ccCCcccCCCCCCcccCC---------------
Confidence 3444 4667999999999999999999999999999999987 4 578899999999999988
Q ss_pred CceeeeeeCCCceEEEEEEEEEEEeecCCCccccc-cEEEEeeecCCCCcCC--CCcceeEecCCCCCc--------hhH
Q 047238 167 KCVYTRRYHVGDVTRGLASRETFAFPVRNGFTFVP-RLAFGCSNDNSGFAFG--GKISGILGFNASPLS--------LSS 235 (446)
Q Consensus 167 ~~~~~~~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~-~~~fg~~~~~~~~~~~--~~~~GIlGLg~~~~s--------~~~ 235 (446)
|.|.+.|++|+ +.|.+++|+|+|++. ..+. .+.|+++..... .+. ..++||||||++..+ ++.
T Consensus 127 -~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~---~~~~~~~~~~~~~~~~~-~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~ 200 (455)
T 3lpj_A 127 -KGVYVPYTQGK-WEGELGTDLVSIPHG---PNVTVRANIAAITESDK-FFINGSNWEGILGLAYAEIARPDDSLEPFFD 200 (455)
T ss_dssp -EEEEEECSSCE-EEEEEEEEEEECTTS---CSCEEEEEEEEEEEEES-CSCTTCCCCEEEECSCGGGCSSCTTSCCHHH
T ss_pred -ccEEEEeCCeE-EEEEEEEEEEEECCC---cceeeEEEEEEEEccCc-ccccCCCcceEEEeCccccccccCCCCcHHH
Confidence 88999999999 799999999999842 2222 367888877655 432 378999999997654 455
Q ss_pred hhhhh--ccCceEEeeecC----------CCCceeEEEccCC-ccCCCCceeeeeecCCCCCeEEEEeeeEEEecEEEee
Q 047238 236 QLRNR--IQGLFSYCLVRE----------MEATSVIKFGRDA-DVRRRDLETTPILLSDLRPHFYLHLLEISIGRHIVRF 302 (446)
Q Consensus 236 Ql~~~--~~~~Fs~~l~~~----------~~~~g~l~fGg~d-~~~~g~l~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~ 302 (446)
+|.++ ..++||+||.+. ....|.|+|||+| .+|.|++.|+|+.. ..+|.|.+++|+|+++.+.+
T Consensus 201 ~L~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~w~v~l~~i~v~g~~~~~ 277 (455)
T 3lpj_A 201 SLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRR---EWYYEVIIVRVEINGQDLKM 277 (455)
T ss_dssp HHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCS---BTTBBCCEEEEEETTEECCC
T ss_pred HHHHccCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecCC---CceeEEEEeEEEECCEEccc
Confidence 66553 347999999752 3468999999999 88999999999987 68999999999999998876
Q ss_pred CCCccccccCCCCcEEEeccCccccccchHHHHHHHHHHHHHhccCCCCCCCCCCCCCccccccCCC-CCCcCeEEEEEc
Q 047238 303 PPGAFDIMRDGTGGFIIDTGTPVTFIRNGPYQTLMQRYDQILRSLGRQRIPYNASQEFDYCYRYDSS-FKAYPSMTFHLQ 381 (446)
Q Consensus 303 ~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~-~~~~p~i~~~f~ 381 (446)
+...+. ...+||||||++++||++++++|++++.+...........+ ..+.++|+..... ...+|+|+|+|+
T Consensus 278 ~~~~~~-----~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~--~g~~~~C~~~~~~~~~~~P~i~f~f~ 350 (455)
T 3lpj_A 278 DCKEYN-----YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFW--LGEQLVCWQAGTTPWNIFPVISLYLM 350 (455)
T ss_dssp CGGGGG-----SSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTTSCCCHHHH--TTCSCEEESTTCCCGGGSCCEEEEEE
T ss_pred cccccC-----CCeEEEECCCcceeCCHHHHHHHHHHhhhhccccccCcccc--cCcceecccccCCchhcCCcEEEEEc
Confidence 543221 25799999999999999999999999999854221111100 1235899987521 224899999999
Q ss_pred Ce------EEEEcCCCeEEEEcCCC----ceEEEE--EcCCCceeechhhhceeEEEEECCCCEEEEEeCCCCCC
Q 047238 382 EA------DYIVQPENMYFIEPDRG----RFCVAI--QDDPKYSILGAWQQQNMLIIYDLNVPALRFGSENCANG 444 (446)
Q Consensus 382 g~------~~~l~~~~~y~~~~~~~----~~C~~~--~~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~c~~~ 444 (446)
|. +|+|++++ |+++..+. ..|+++ ....+.||||++|||++|+|||++++|||||+++|+..
T Consensus 351 g~~~~~~~~~~l~~~~-yi~~~~~~~~~~~~C~~f~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~ 424 (455)
T 3lpj_A 351 GEVTNQSFRITILPQQ-YLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVH 424 (455)
T ss_dssp CSSTTEEEEEEECHHH-HEEEECCTTCCSCEEEEECEEEESSCEEECHHHHTTEEEEEETTTTEEEEEEETTCCC
T ss_pred CCCcCceEEEEECHHH-heEeccCCCCCCceEEEEeccCCCCcEEEChHHhCCeEEEEECCCCEEEEEecccccc
Confidence 85 59999999 99986642 589874 33446899999999999999999999999999999764
No 29
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=2.6e-56 Score=435.48 Aligned_cols=295 Identities=18% Similarity=0.241 Sum_probs=247.2
Q ss_pred ecCccEEEEEEECCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCccceecCCCCCCCCCCCCCCCCceee
Q 047238 92 KQDLFYSVEVNIGTPMKPQHLLFDTASSLVWTQCQPCIRCFDQTTPIFDPRASTTYSEIPCDDPLCRSPFKCQNGKCVYT 171 (446)
Q Consensus 92 ~~~~~Y~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~C~~~~~~~~ 171 (446)
..+.+|+++|.|| +|++.|+|||||+++||+|..|..|.|+.++.|||++|+ ++... |.|.
T Consensus 12 ~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~~~----------------~~~~ 72 (323)
T 1bxo_A 12 ANDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELPASQQSGHSVYNPSATG-KELSG----------------YTWS 72 (323)
T ss_dssp GGGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHTTSCCBCHHHHC-EEEEE----------------EEEE
T ss_pred CCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCchhccCCCCCCcccCC-cccCC----------------CeEE
Confidence 4788999999999 899999999999999999999999988899999999999 66555 8899
Q ss_pred eeeCCCceEEEEEEEEEEEeecCCCccccccEEEEeeecCCCCcCC--CCcceeEecCCCCCc---------hhHhhhhh
Q 047238 172 RRYHVGDVTRGLASRETFAFPVRNGFTFVPRLAFGCSNDNSGFAFG--GKISGILGFNASPLS---------LSSQLRNR 240 (446)
Q Consensus 172 ~~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~~fg~~~~~~~~~~~--~~~~GIlGLg~~~~s---------~~~Ql~~~ 240 (446)
+.|++|+.+.|.+++|+|+|+ ++.++++.|||++...+ .++ ...+||||||++..+ ++++|.++
T Consensus 73 i~Yg~Gs~~~G~~~~D~v~ig----~~~v~~~~fg~~~~~~~-~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~ 147 (323)
T 1bxo_A 73 ISYGDGSSASGNVFTDSVTVG----GVTAHGQAVQAAQQISA-QFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTVKSS 147 (323)
T ss_dssp EECTTSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEECH-HHHTCTTCSEEEECSCGGGCCCBSSCCCCHHHHHGGG
T ss_pred EEeCCCCeEEEEEEEEEEEEC----CEEECcEEEEEEEecCc-ccccCCCCceEEEeCcccccccccCCCCCHHHHHHHh
Confidence 999999989999999999999 57899999999998765 433 368999999997654 34555433
Q ss_pred -ccCceEEeeecCCCCceeEEEccCC-ccCCCCceeeeeecCCCCCeEEEEeeeEEEecEEEeeCCCccccccCCCCcEE
Q 047238 241 -IQGLFSYCLVREMEATSVIKFGRDA-DVRRRDLETTPILLSDLRPHFYLHLLEISIGRHIVRFPPGAFDIMRDGTGGFI 318 (446)
Q Consensus 241 -~~~~Fs~~l~~~~~~~g~l~fGg~d-~~~~g~l~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~i 318 (446)
..++||+||.+ ...|.|+|||+| ++|.|++.|+|+... ..+|.|.+++|+|++ ... . ...+|
T Consensus 148 i~~~~FS~~L~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~w~v~l~~i~v~~-~~~---~--------~~~ai 211 (323)
T 1bxo_A 148 LAQPLFAVALKH--QQPGVYDFGFIDSSKYTGSLTYTGVDNS--QGFWSFNVDSYTAGS-QSG---D--------GFSGI 211 (323)
T ss_dssp BSSSEEEEECCS--SSCEEEEESSCCGGGBSSCCEEEECBCT--TSSCEEEEEEEEETT-EEE---E--------EEEEE
T ss_pred cCCcEEEEEEeC--CCCceEEEeCcChhhccCceEEEECCCC--CCeEEEEEeeEEECC-ccC---C--------CceEE
Confidence 47999999987 468999999999 889999999999852 479999999999998 211 1 14699
Q ss_pred EeccCccccccchHHHHHHHHHHHHHhccCCCCCCCCCCCCCccccccCCCCCCcCeEEEEEcCeEEEEcCCCeEEEEcC
Q 047238 319 IDTGTPVTFIRNGPYQTLMQRYDQILRSLGRQRIPYNASQEFDYCYRYDSSFKAYPSMTFHLQEADYIVQPENMYFIEPD 398 (446)
Q Consensus 319 iDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~i~~~f~g~~~~l~~~~~y~~~~~ 398 (446)
|||||++++||++++++|++++.+... .... ..+.++|+. .+|+|+|+|+|++++||+++ |+++..
T Consensus 212 iDSGTs~~~lP~~~~~~l~~~i~~a~~---~~~~----g~~~~~C~~------~~P~i~f~fgg~~~~l~~~~-~~~~~~ 277 (323)
T 1bxo_A 212 ADTGTTLLLLDDSVVSQYYSQVSGAQQ---DSNA----GGYVFDCST------NLPDFSVSISGYTATVPGSL-INYGPS 277 (323)
T ss_dssp ECTTCSSEEECHHHHHHHHTTSTTCEE---ETTT----TEEEECTTC------CCCCEEEEETTEEEEECHHH-HEEEEC
T ss_pred EeCCCCceeCCHHHHHHHHHhCCCceE---cCcC----CEEEEECCC------CCceEEEEECCEEEEECHHH-eEEecc
Confidence 999999999999999999998843211 0111 223478983 68999999999999999999 888764
Q ss_pred C-CceEEE-EEcC--CCceeechhhhceeEEEEECCCCEEEEEeCC
Q 047238 399 R-GRFCVA-IQDD--PKYSILGAWQQQNMLIIYDLNVPALRFGSEN 440 (446)
Q Consensus 399 ~-~~~C~~-~~~~--~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 440 (446)
+ ...|+. +... .+.||||++|||++|+|||++++|||||+++
T Consensus 278 ~~~~~C~~~i~~~~~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1bxo_A 278 GDGSTCLGGIQSNSGIGFSIFGDIFLKSQYVVFDSDGPQLGFAPQA 323 (323)
T ss_dssp SSSSCEEESEEECTTCSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CCCCeEEEEEECCCCCCcEEEChHHHcCEEEEEECCCCEEEEecCC
Confidence 4 468987 5543 3589999999999999999999999999864
No 30
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=6.9e-55 Score=438.29 Aligned_cols=316 Identities=16% Similarity=0.253 Sum_probs=252.2
Q ss_pred cCccEEEEEEECCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCccceecCCCCCCCCCCCCCCCCceeee
Q 047238 93 QDLFYSVEVNIGTPMKPQHLLFDTASSLVWTQCQPCIRCFDQTTPIFDPRASTTYSEIPCDDPLCRSPFKCQNGKCVYTR 172 (446)
Q Consensus 93 ~~~~Y~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~C~~~~~~~~~ 172 (446)
.+..|+++|.||||+|++.|+|||||+++||+|..| | ..++.|+|++|+|++... |.|.+
T Consensus 26 ~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c--~--~~~~~y~~~~SsT~~~~~----------------~~~~i 85 (402)
T 3vf3_A 26 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--P--FLHRYYQRQLSSTYRDLR----------------KGVYV 85 (402)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--T--TCSCCCCGGGCTTCEEEE----------------EEEEE
T ss_pred CCCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC--C--cccCCcCcccCcccccCC----------------CEEEE
Confidence 556899999999999999999999999999999987 4 568899999999999988 88999
Q ss_pred eeCCCceEEEEEEEEEEEeecCCCccccc-cEEEEeeecCCCCcCC--CCcceeEecCCCCCc--------hhHhhhhh-
Q 047238 173 RYHVGDVTRGLASRETFAFPVRNGFTFVP-RLAFGCSNDNSGFAFG--GKISGILGFNASPLS--------LSSQLRNR- 240 (446)
Q Consensus 173 ~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~-~~~fg~~~~~~~~~~~--~~~~GIlGLg~~~~s--------~~~Ql~~~- 240 (446)
.|++|+ +.|.+++|+|+|++. ..+. .+.|+++....+ .+. ...+||||||++..+ ++.+|.++
T Consensus 86 ~Yg~Gs-~~G~~~~D~v~ig~~---~~~~~~~~~~~~~~~~~-~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~ 160 (402)
T 3vf3_A 86 PYTQGK-WEGELGTDLVSIPHG---PNVTVRANIAAITESDK-FFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQT 160 (402)
T ss_dssp ECSSCE-EEEEEEEEEEECTTS---CSCEEEEEEEEEEEEES-CSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHS
T ss_pred EECcEE-EEEEEEEEEEEECCc---cccceeeeEEEEEcccc-ccccCCCccceEEcCchhhcccCCcCCcHHHHHHHcc
Confidence 999999 799999999999842 2233 345787776654 332 378999999997654 45566554
Q ss_pred -ccCceEEeeecC----------CCCceeEEEccCC-ccCCCCceeeeeecCCCCCeEEEEeeeEEEecEEEeeCCCccc
Q 047238 241 -IQGLFSYCLVRE----------MEATSVIKFGRDA-DVRRRDLETTPILLSDLRPHFYLHLLEISIGRHIVRFPPGAFD 308 (446)
Q Consensus 241 -~~~~Fs~~l~~~----------~~~~g~l~fGg~d-~~~~g~l~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~ 308 (446)
..++||+||.+. ....|.|+|||+| .+|.|++.|+|+.. ..+|.|.+++|+|+++.+.++...+.
T Consensus 161 ~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~w~v~l~~i~v~g~~~~~~~~~~~ 237 (402)
T 3vf3_A 161 HVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRR---EWYYEVIIVRVEINGQDLKMDCKEYN 237 (402)
T ss_dssp CCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECSS---BTTBEECEEEEEETTEECCCCGGGGG
T ss_pred CCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCCc---CcEEEEEEeEEEECCEEecccccccC
Confidence 347999999742 3458999999999 88999999999987 68999999999999998876443221
Q ss_pred cccCCCCcEEEeccCccccccchHHHHHHHHHHHHHhccCCCCCCCCCCCCCccccccCCC-CCCcCeEEEEEcCe----
Q 047238 309 IMRDGTGGFIIDTGTPVTFIRNGPYQTLMQRYDQILRSLGRQRIPYNASQEFDYCYRYDSS-FKAYPSMTFHLQEA---- 383 (446)
Q Consensus 309 ~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~-~~~~p~i~~~f~g~---- 383 (446)
...+||||||++++||++++++|++++.+...........+ ..+.++|+..... ...+|+|+|+|+|.
T Consensus 238 -----~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~--~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~ 310 (402)
T 3vf3_A 238 -----YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFW--LGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQ 310 (402)
T ss_dssp -----SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCTTGG--GTCSCEEEETTCCCGGGSCCEEEEEECSSTTE
T ss_pred -----CCeEEEECCCCcccCCHHHHHHHHHHHhhhccccccCcccc--ccccccccccccchHhhCCceEEEEecCCCCc
Confidence 25799999999999999999999999999854221111100 1235899986422 23589999999985
Q ss_pred --EEEEcCCCeEEEEcCCC----ceEEEE--EcCCCceeechhhhceeEEEEECCCCEEEEEeCCCCCC
Q 047238 384 --DYIVQPENMYFIEPDRG----RFCVAI--QDDPKYSILGAWQQQNMLIIYDLNVPALRFGSENCANG 444 (446)
Q Consensus 384 --~~~l~~~~~y~~~~~~~----~~C~~~--~~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~c~~~ 444 (446)
+++|++++ |+++..+. ..|+++ ....+.||||++|||++|+|||++++|||||+++|+..
T Consensus 311 ~~~~~l~~~~-yi~~~~~~~~~~~~C~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~ 378 (402)
T 3vf3_A 311 SFRITILPQQ-YLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVH 378 (402)
T ss_dssp EEEEEECHHH-HEEECCCGGGTTEEEEEECEEEESSCEEECHHHHTTEEEEEEGGGTEEEEEEETTCCB
T ss_pred eEEEEECHHH-heehhccCCCCCceEEEEeccCCCCcEEEChHHhCCeEEEEECCCCEEEEEecccCcc
Confidence 59999999 99986542 489863 33446899999999999999999999999999999964
No 31
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=4.7e-55 Score=438.37 Aligned_cols=320 Identities=17% Similarity=0.253 Sum_probs=254.0
Q ss_pred ccce-ecCccEEEEEEECCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCccceecCCCCCCCCCCCCCCC
Q 047238 88 LPMA-KQDLFYSVEVNIGTPMKPQHLLFDTASSLVWTQCQPCIRCFDQTTPIFDPRASTTYSEIPCDDPLCRSPFKCQNG 166 (446)
Q Consensus 88 ~pl~-~~~~~Y~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~C~~~ 166 (446)
.+|. ..+.+|+++|.||||+|++.|+|||||+++||+|..|..| ++.|||++|+|++...
T Consensus 13 ~~l~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~~~----~~~y~~~~SsT~~~~~--------------- 73 (395)
T 2qp8_A 13 DNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFL----HRYYQRQLSSTYRDLR--------------- 73 (395)
T ss_dssp TCEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTTC----SCCCCGGGCTTCEEEE---------------
T ss_pred eecCCCCCceEEEEEEecCCCceEEEEEecCCCceEEECCCCccc----cCCcCcccCCCceeCC---------------
Confidence 4455 4677899999999999999999999999999999988554 6889999999999988
Q ss_pred CceeeeeeCCCceEEEEEEEEEEEeecCCCccccc-cEEEEeeecCCCCcCC--CCcceeEecCCCCCc--------hhH
Q 047238 167 KCVYTRRYHVGDVTRGLASRETFAFPVRNGFTFVP-RLAFGCSNDNSGFAFG--GKISGILGFNASPLS--------LSS 235 (446)
Q Consensus 167 ~~~~~~~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~-~~~fg~~~~~~~~~~~--~~~~GIlGLg~~~~s--------~~~ 235 (446)
|.|.+.|++|+ +.|.+++|+|+|++ +..+. .+.|++.....+ .+. ...+||||||++..+ ++.
T Consensus 74 -~~~~i~Yg~Gs-~~G~~~~Dtv~ig~---g~~~~~~~~~~~~~~~~~-~f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~ 147 (395)
T 2qp8_A 74 -KGVYVPYTQGK-WEGELGTDLVSIPH---GPNVTVRANIAAITESDK-FFINGSNWEGILGLAYAEIARPDDSLEPFFD 147 (395)
T ss_dssp -EEEEEECSSCE-EEEEEEEEEEECTT---SCSCEEEEEEEEEEEEES-CSCTTCCCCEEEECSCGGGCSSCTTSCCHHH
T ss_pred -ceEEEEECCcE-EEEEEEeEEEEECC---CCCceEEEEEEEEEccCc-ccccccCccceEEcCchhhccCCCCCCCHHH
Confidence 88999999999 69999999999984 12222 366787766544 322 368999999997654 344
Q ss_pred hhhhh--ccCceEEeeecC----------CCCceeEEEccCC-ccCCCCceeeeeecCCCCCeEEEEeeeEEEecEEEee
Q 047238 236 QLRNR--IQGLFSYCLVRE----------MEATSVIKFGRDA-DVRRRDLETTPILLSDLRPHFYLHLLEISIGRHIVRF 302 (446)
Q Consensus 236 Ql~~~--~~~~Fs~~l~~~----------~~~~g~l~fGg~d-~~~~g~l~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~ 302 (446)
+|.++ ..++||+||.+. ....|.|+|||+| ++|.|++.|+|+.. ..+|.|.|++|+|+++.+.+
T Consensus 148 ~l~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~~~v~l~~i~v~g~~~~~ 224 (395)
T 2qp8_A 148 SLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRR---EWYYEVIIVRVEINGQDLKM 224 (395)
T ss_dssp HHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCS---BTTBBCCEEEEEETTEECCC
T ss_pred HHHHccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccCC---CceEEEEEEEEEECCEEccc
Confidence 65543 347999999752 1368999999999 88999999999987 57999999999999998765
Q ss_pred CCCccccccCCCCcEEEeccCccccccchHHHHHHHHHHHHHhccCCCCCCCCCCCCCccccccCCC-CCCcCeEEEEEc
Q 047238 303 PPGAFDIMRDGTGGFIIDTGTPVTFIRNGPYQTLMQRYDQILRSLGRQRIPYNASQEFDYCYRYDSS-FKAYPSMTFHLQ 381 (446)
Q Consensus 303 ~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~-~~~~p~i~~~f~ 381 (446)
+...+. ...+||||||++++||++++++|++++.+...........| ....++|+..... ...+|+|+|+|+
T Consensus 225 ~~~~~~-----~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~--~~~~~~C~~~~~~~~~~~P~i~f~f~ 297 (395)
T 2qp8_A 225 DCKEYN-----YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFW--LGEQLVCWQAGTTPWNIFPVISLYLM 297 (395)
T ss_dssp CGGGGG-----SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCHHHH--TTCSCEEESTTCCCGGGSCCEEEEEE
T ss_pred CccccC-----CceEEEEcCCCcEecCHHHHHHHHHHHhhhcccccCCcccc--ccccccccccccchHhhCCcEEEEEc
Confidence 443221 25799999999999999999999999988753211110000 0124799976422 235899999998
Q ss_pred Ce------EEEEcCCCeEEEEcCC----CceEEE--EEcCCCceeechhhhceeEEEEECCCCEEEEEeCCCCC
Q 047238 382 EA------DYIVQPENMYFIEPDR----GRFCVA--IQDDPKYSILGAWQQQNMLIIYDLNVPALRFGSENCAN 443 (446)
Q Consensus 382 g~------~~~l~~~~~y~~~~~~----~~~C~~--~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~c~~ 443 (446)
|. +|+|++++ |+++..+ ...|++ +.+..+.||||+.|||++|+|||++++|||||+++|..
T Consensus 298 g~~~~~~~~~~l~p~~-yi~~~~~~~~~~~~C~~~~i~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~ 370 (395)
T 2qp8_A 298 GEVTNQSFRITILPQQ-YLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHV 370 (395)
T ss_dssp CSSTTEEEEEEECHHH-HEEEECCTTCCSCEEEEECEEEESSCEEECHHHHTTEEEEEETTTTEEEEEEETTCC
T ss_pred cCCCCceEEEEECHHH-hEeecccCCCCCceEEEEEecCCCCcEEEChHHhCCeeEEEECCCCEEEEEeccCCC
Confidence 74 79999999 9988643 348974 44445689999999999999999999999999999985
No 32
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=1.3e-54 Score=432.91 Aligned_cols=323 Identities=24% Similarity=0.445 Sum_probs=250.8
Q ss_pred ccccce--ecCccEEEEEEECCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCccceecCCCCCCCC----
Q 047238 86 IHLPMA--KQDLFYSVEVNIGTPMKPQHLLFDTASSLVWTQCQPCIRCFDQTTPIFDPRASTTYSEIPCDDPLCRS---- 159 (446)
Q Consensus 86 ~~~pl~--~~~~~Y~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~---- 159 (446)
+.+||. ..+.+|+++|.|||| |+|||||+++||+|..|. +++.+.|.++.|..
T Consensus 3 ~~~pv~~~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~----------------~~~~~~C~s~~C~~~~~~ 61 (381)
T 1t6e_X 3 VLAPVTKDPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQ----------------PPAEIPCSSPTCLLANAY 61 (381)
T ss_dssp EEEEEEECTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTC----------------CCCCCBTTSHHHHHHHSS
T ss_pred eEEeEEecCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCCC----------------CCCccCCCCchhccccCC
Confidence 456776 578999999999998 999999999999987551 12233343333322
Q ss_pred -CCCCC---------CCCc-eeeeeeCCCceEEEEEEEEEEEeecCCCccccccE----EEEeeecCCCCcCCCCcceeE
Q 047238 160 -PFKCQ---------NGKC-VYTRRYHVGDVTRGLASRETFAFPVRNGFTFVPRL----AFGCSNDNSGFAFGGKISGIL 224 (446)
Q Consensus 160 -~~~C~---------~~~~-~~~~~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~----~fg~~~~~~~~~~~~~~~GIl 224 (446)
+..|. ++.| .|.++|++|+.+.|.+++|+|+|++.++++.++++ .|||++.+....++..++|||
T Consensus 62 ~~~sc~~~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~~~~~~dGIl 141 (381)
T 1t6e_X 62 PAPGCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASLPRGSTGVA 141 (381)
T ss_dssp CCTTCCCCCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTSCTTEEEEE
T ss_pred CCCCCCCccCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCCCCCCCceEE
Confidence 01222 2246 59999999997799999999999964434556665 569998762202235799999
Q ss_pred ecCCCCCchhHhhhhh--ccCceEEeeecCCCCceeEEEccCCc---cCCCCceeeeeecCCCCCeEEEEeeeEEEecEE
Q 047238 225 GFNASPLSLSSQLRNR--IQGLFSYCLVREMEATSVIKFGRDAD---VRRRDLETTPILLSDLRPHFYLHLLEISIGRHI 299 (446)
Q Consensus 225 GLg~~~~s~~~Ql~~~--~~~~Fs~~l~~~~~~~g~l~fGg~d~---~~~g~l~~~p~~~~~~~~~w~v~l~~i~v~~~~ 299 (446)
|||++.+++++||..+ .+++||+||.+. ..|.|+|||+|. ++.+++.|+|++.++...+|.|.|++|+||++.
T Consensus 142 GLg~~~~s~~~ql~~~~~~~~~FS~~L~~~--~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~vg~~~ 219 (381)
T 1t6e_X 142 GLANSGLALPAQVASAQKVANRFLLCLPTG--GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTR 219 (381)
T ss_dssp ECSSSTTSHHHHHHHHHTCCSEEEEECCSS--SCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTEE
T ss_pred EeCCCcchhHHHHhhhcccCceEEEEeCCC--CCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEEcCEE
Confidence 9999999999998753 578999999884 689999999884 478999999999865445677999999999998
Q ss_pred EeeCCCccccccCCCCcEEEeccCccccccchHHHHHHHHHHHHHhc--------cCCCCCCCCCCCCCccccccCCCC-
Q 047238 300 VRFPPGAFDIMRDGTGGFIIDTGTPVTFIRNGPYQTLMQRYDQILRS--------LGRQRIPYNASQEFDYCYRYDSSF- 370 (446)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~--------~~~~~~~~~~~~~~~~C~~~~~~~- 370 (446)
+.++...|. .+++||||||++++||+++|++|.+++.+.+.. ++.... ...+++|+..+...
T Consensus 220 ~~~~~~~~~-----~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~C~~~~~~~~ 290 (381)
T 1t6e_X 220 VPVPEGALA-----TGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEA----VAPFGVCYDTKTLGN 290 (381)
T ss_dssp CCCCTTCSC-----TTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECC----CTTCSCEEEGGGCCE
T ss_pred ecCCHHHcc-----CCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCC----CCCCCccCCCCCCcc
Confidence 876655442 257999999999999999999999999987642 121011 23568999765321
Q ss_pred ----CCcCeEEEEEcC-eEEEEcCCCeEEEEcCCCceEEEEEcCC---------CceeechhhhceeEEEEECCCCEEEE
Q 047238 371 ----KAYPSMTFHLQE-ADYIVQPENMYFIEPDRGRFCVAIQDDP---------KYSILGAWQQQNMLIIYDLNVPALRF 436 (446)
Q Consensus 371 ----~~~p~i~~~f~g-~~~~l~~~~~y~~~~~~~~~C~~~~~~~---------~~~ilG~~fl~~~y~vfD~~~~riGf 436 (446)
..+|+|+|+|+| ++|+|++++ |+++..++..|++++..+ +.||||+.|||++|+|||++++||||
T Consensus 291 ~~~~~~~P~i~f~f~gg~~~~l~~~~-y~~~~~~~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riGf 369 (381)
T 1t6e_X 291 NLGGYAVPNVQLGLDGGSDWTMTGKN-SMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGF 369 (381)
T ss_dssp ETTEECCCCEEEEETTSCEEEECHHH-HEEEEETTEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEE
T ss_pred cccCCcCCeEEEEECCCcEEEeCCCe-EEEEcCCCeEEEEEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEEE
Confidence 268999999985 999999999 999865567899887543 47999999999999999999999999
Q ss_pred EeCCC
Q 047238 437 GSENC 441 (446)
Q Consensus 437 a~~~c 441 (446)
|+++.
T Consensus 370 A~~~~ 374 (381)
T 1t6e_X 370 SRLPH 374 (381)
T ss_dssp EECCT
T ss_pred ecccC
Confidence 98653
No 33
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=2.5e-54 Score=424.72 Aligned_cols=298 Identities=17% Similarity=0.255 Sum_probs=245.6
Q ss_pred cccceecCccEEEEEEECCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCCCCCCCccceecCCCCCCCCCCCCCCC
Q 047238 87 HLPMAKQDLFYSVEVNIGTPMKPQHLLFDTASSLVWTQCQPCIRCFDQTTPIFDPRASTTYSEIPCDDPLCRSPFKCQNG 166 (446)
Q Consensus 87 ~~pl~~~~~~Y~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~C~~~ 166 (446)
++||...+.+|+++|.||||+|++.|+|||||+++||+|. +.|+|++|+++. .
T Consensus 4 ~~~l~n~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~----------~~y~~s~Ss~~~--~--------------- 56 (340)
T 1wkr_A 4 SVPATNQLVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD----------KSYVKTSTSSAT--S--------------- 56 (340)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEETTCCCCEECSS----------SCCCCCTTCEEE--E---------------
T ss_pred cEeeeccCcEEEEEEEECCCCcEEEEEEeCCChhheecCC----------CccCCcCCcccc--C---------------
Confidence 4788877889999999999999999999999999999753 579999888653 3
Q ss_pred CceeeeeeCCCceEEEEEEEEEEEeecCCCccccccEEEEeeecCCCCcCCCCcceeEecCCCCCch-------------
Q 047238 167 KCVYTRRYHVGDVTRGLASRETFAFPVRNGFTFVPRLAFGCSNDNSGFAFGGKISGILGFNASPLSL------------- 233 (446)
Q Consensus 167 ~~~~~~~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~GIlGLg~~~~s~------------- 233 (446)
|.|.+.|++|+ +.|.+++|+|+|+ ++.++++.|||++...+ +...+||||||++..++
T Consensus 57 -~~~~i~Yg~Gs-~~G~~~~Dtv~~g----~~~v~~~~fg~~~~~~~---~~~~~GilGLg~~~~s~~~~~~~~~~~~~~ 127 (340)
T 1wkr_A 57 -DKVSVTYGSGS-FSGTEYTDTVTLG----SLTIPKQSIGVASRDSG---FDGVDGILGVGPVDLTVGTLSPHTSTSIPT 127 (340)
T ss_dssp -EEEEEECSSCE-EEEEEEEEEEEET----TEEEEEEEEEEEEEEES---CTTCSEEEECSCGGGGTTSEESCTTCCCCC
T ss_pred -ceEEEEECCcE-EEEEEEEEEEEEC----CEEEcceEEEEEEccCC---CcCCCcEEECCccccccccccccccccCCC
Confidence 78999999998 9999999999998 57899999999998765 34689999999977553
Q ss_pred -hHhhhhh---ccCceEEeeecC---CCCceeEEEccCC-ccCCCCceeeeeecCCC-CCeEEEEeeeEEEec-EEEeeC
Q 047238 234 -SSQLRNR---IQGLFSYCLVRE---MEATSVIKFGRDA-DVRRRDLETTPILLSDL-RPHFYLHLLEISIGR-HIVRFP 303 (446)
Q Consensus 234 -~~Ql~~~---~~~~Fs~~l~~~---~~~~g~l~fGg~d-~~~~g~l~~~p~~~~~~-~~~w~v~l~~i~v~~-~~~~~~ 303 (446)
+.+|.++ ..++||+||.+. ....|.|+|||+| ++|.|++.|+|+..++. ..+|.|. ++|+|++ +.+..+
T Consensus 128 ~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~v~~~~~l~~~ 206 (340)
T 1wkr_A 128 VTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIRYGSSTSILSS 206 (340)
T ss_dssp HHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEEETTTEEEEEE
T ss_pred HHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeEEECCCeEccCC
Confidence 4444433 368999999863 3468999999999 88999999999998643 3799999 9999998 776421
Q ss_pred CCccccccCCCCcEEEeccCccccccchHHHHHHHHHHHHHhccCCCCCCCCCCCCCccccccCCCCCCcCeEEEEEcCe
Q 047238 304 PGAFDIMRDGTGGFIIDTGTPVTFIRNGPYQTLMQRYDQILRSLGRQRIPYNASQEFDYCYRYDSSFKAYPSMTFHLQEA 383 (446)
Q Consensus 304 ~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~i~~~f~g~ 383 (446)
..+||||||++++||++++++|.+++++.... .. ..+.++|.... .+|+|+|+|+|+
T Consensus 207 -----------~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~~----~~----g~~~~~C~~~~----~~p~i~f~f~g~ 263 (340)
T 1wkr_A 207 -----------TAGIVDTGTTLTLIASDAFAKYKKATGAVADN----NT----GLLRLTTAQYA----NLQSLFFTIGGQ 263 (340)
T ss_dssp -----------EEEEECTTBCSEEECHHHHHHHHHHHTCEECT----TT----SSEEECHHHHH----TCCCEEEEETTE
T ss_pred -----------CeEEEeCCcccccCCHHHHHHHHHhhCCEEcC----CC----CeEEeeccccc----cCCcEEEEECCE
Confidence 36999999999999999999998888654221 11 22348998765 789999999999
Q ss_pred EEEEcCCCeEEEEcC-------CCceEE-EEEc--C----CCceeechhhhceeEEEEECCCCEEEEEeCCCCCCC
Q 047238 384 DYIVQPENMYFIEPD-------RGRFCV-AIQD--D----PKYSILGAWQQQNMLIIYDLNVPALRFGSENCANGR 445 (446)
Q Consensus 384 ~~~l~~~~~y~~~~~-------~~~~C~-~~~~--~----~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~c~~~~ 445 (446)
+++|++++ |+++.. +...|+ .+.+ . +..||||+.|||++|+|||++++|||||+++|++.+
T Consensus 264 ~~~i~~~~-yi~~~~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~~ 338 (340)
T 1wkr_A 264 TFELTANA-QIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTSFTTAT 338 (340)
T ss_dssp EEEECTGG-GBCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECTTTTCC
T ss_pred EEEEcHHH-hccccccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEEEEecCCCCCC
Confidence 99999999 998753 124675 3443 1 236999999999999999999999999999998764
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=6.7e-44 Score=332.64 Aligned_cols=221 Identities=22% Similarity=0.329 Sum_probs=189.8
Q ss_pred cccce-ecCccEEEEEEECCCCceEEEEEEcCCCceeEeCCCCC---CCCCCCCCCCCCCCCCccceecCCCCCCCCCCC
Q 047238 87 HLPMA-KQDLFYSVEVNIGTPMKPQHLLFDTASSLVWTQCQPCI---RCFDQTTPIFDPRASTTYSEIPCDDPLCRSPFK 162 (446)
Q Consensus 87 ~~pl~-~~~~~Y~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~~~C~---~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~ 162 (446)
.+||. +.+.+|+++|.||||+|++.|+|||||+++||+|..|. .| ..++.|||++|+|++...
T Consensus 4 ~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C--~~~~~y~~~~SsT~~~~~----------- 70 (239)
T 1b5f_A 4 VVALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKAC--RAHSMYESSDSSTYKENG----------- 70 (239)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHH--HTSCCBCGGGCTTCEEEE-----------
T ss_pred eeeeeecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCccc--CCCCCCCCccCCCeeeCC-----------
Confidence 47888 68899999999999999999999999999999999996 56 467899999999999987
Q ss_pred CCCCCceeeeeeCCCceEEEEEEEEEEEeecCCCccccccEEEEeeecCCCCcCC--CCcceeEecCCCCCc--hhHhhh
Q 047238 163 CQNGKCVYTRRYHVGDVTRGLASRETFAFPVRNGFTFVPRLAFGCSNDNSGFAFG--GKISGILGFNASPLS--LSSQLR 238 (446)
Q Consensus 163 C~~~~~~~~~~Y~~g~~~~G~~~~D~v~l~~~~~~~~~~~~~fg~~~~~~~~~~~--~~~~GIlGLg~~~~s--~~~Ql~ 238 (446)
|.+.+.|++|+ +.|.+++|+|+|+ ++.++++.|||+....+ ..+ ..++||||||++..+ +..+|.
T Consensus 71 -----~~~~i~Yg~Gs-~~G~~~~D~v~~g----~~~v~~~~fg~~~~~~~-~~f~~~~~~GilGLg~~~~s~p~~~~l~ 139 (239)
T 1b5f_A 71 -----TFGAIIYGTGS-ITGFFSQDSVTIG----DLVVKEQDFIEATDEAD-NVFLHRLFDGILGLSFQTISVPVWYNML 139 (239)
T ss_dssp -----EEEEEECSSCE-EEEEEEEEEEEET----TEEEEEEEEEEEEEECH-HHHTTCSCCEEEECSCCSSSCCHHHHHH
T ss_pred -----cEEEEEECCCc-EEEEEEEEEEEEC----CcEEccEEEEEEEeccC-ccccccCcceEEecCccccccHHHHHHH
Confidence 78999999998 8999999999998 57899999999987654 212 378999999999887 333443
Q ss_pred hh---ccCceEEeeecC--CCCceeEEEccCC-ccCCCCceeeeeecCCCCCeEEEEeeeEEEecEEEeeCCCccccccC
Q 047238 239 NR---IQGLFSYCLVRE--MEATSVIKFGRDA-DVRRRDLETTPILLSDLRPHFYLHLLEISIGRHIVRFPPGAFDIMRD 312 (446)
Q Consensus 239 ~~---~~~~Fs~~l~~~--~~~~g~l~fGg~d-~~~~g~l~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~ 312 (446)
++ ..++||+||.+. ....|.|+|||+| ++|.|++.|+|+.. ..+|.|.|++|+|+++.+.+...
T Consensus 140 ~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~~~v~l~~i~v~~~~~~~~~~------- 209 (239)
T 1b5f_A 140 NQGLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVTY---QYYWQFGIGDVLIGDKSTGFCAP------- 209 (239)
T ss_dssp HTTCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEEE---ETTEEEEECCEEETTEECCTTTT-------
T ss_pred HCCCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEccc---CCeEEEEeeEEEECCEEecccCC-------
Confidence 32 378999999884 3468999999999 88999999999987 57999999999999987754322
Q ss_pred CCCcEEEeccCccccccchHHHHHHHHHHH
Q 047238 313 GTGGFIIDTGTPVTFIRNGPYQTLMQRYDQ 342 (446)
Q Consensus 313 ~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~ 342 (446)
...+||||||++++||++++++|.+++++
T Consensus 210 -~~~aiiDTGTt~~~lP~~~~~~i~~~iga 238 (239)
T 1b5f_A 210 -GCQAFADSGTSLLSGPTAIVTQINHAIGA 238 (239)
T ss_dssp -CEEEEECTTCSSEEECHHHHHHHHHHTTC
T ss_pred -CCEEEEecCcchhhCCHHHHHHHHHHhCC
Confidence 25699999999999999999999998753
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=1.3e-38 Score=297.67 Aligned_cols=217 Identities=19% Similarity=0.280 Sum_probs=178.4
Q ss_pred ccccccEEEEeeecCCCCcCCC--CcceeEecCCCCCc------hhHhhhhh---ccCceEEeeecCCC--CceeEEEcc
Q 047238 197 FTFVPRLAFGCSNDNSGFAFGG--KISGILGFNASPLS------LSSQLRNR---IQGLFSYCLVREME--ATSVIKFGR 263 (446)
Q Consensus 197 ~~~~~~~~fg~~~~~~~~~~~~--~~~GIlGLg~~~~s------~~~Ql~~~---~~~~Fs~~l~~~~~--~~g~l~fGg 263 (446)
+++++++.|||++.+.+ ..+. ..+||||||++..+ +++||.++ ..++||+||.+... ..|.|+|||
T Consensus 2 g~~v~~~~Fg~~~~~~~-~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg 80 (241)
T 1lya_B 2 GVKVERQVFGEATKQPG-ITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGG 80 (241)
T ss_dssp CEEEEEEEEEEEEECCS-STTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETS
T ss_pred CeEECCeEEEEEEEccC-CccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECC
Confidence 57889999999998876 4343 78999999998765 44565543 47999999998533 389999999
Q ss_pred CC-ccCCCCceeeeeecCCCCCeEEEEeeeEEEecEEEeeCCCccccccCCCCcEEEeccCccccccchHHHHHHHHHHH
Q 047238 264 DA-DVRRRDLETTPILLSDLRPHFYLHLLEISIGRHIVRFPPGAFDIMRDGTGGFIIDTGTPVTFIRNGPYQTLMQRYDQ 342 (446)
Q Consensus 264 ~d-~~~~g~l~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~l~~ 342 (446)
+| ++|.|++.|+|+.. ..+|.|.+++|+|+++.+.... ...+||||||+++++|++++++|.+++++
T Consensus 81 ~d~~~~~g~l~~~p~~~---~~~~~v~l~~i~v~~~~~~~~~---------~~~aiiDSGTt~~~lP~~~~~~l~~~~~~ 148 (241)
T 1lya_B 81 TDSKYYKGSLSYLNVTR---KAYWQVHLDQVEVASGLTLCKE---------GCEAIVDTGTSLMVGPVDEVRELQKAIGA 148 (241)
T ss_dssp CCGGGEEEEEEEEECSS---BTTBEEEEEEEEETTSCEESTT---------CEEEEECTTCSSEEECHHHHHHHHHHHTC
T ss_pred cCHHHcCCceEEEECcc---ccEEEEEEeEEEECCeeEeccC---------CCEEEEECCCccccCCHHHHHHHHHHhCC
Confidence 99 88999999999986 6899999999999997653211 25699999999999999999999999865
Q ss_pred HHhccCCCCCCCCCCCCCccccccCCCCCCcCeEEEEEcCeEEEEcCCCeEEEEcCC--CceEEE-EEcC------CCce
Q 047238 343 ILRSLGRQRIPYNASQEFDYCYRYDSSFKAYPSMTFHLQEADYIVQPENMYFIEPDR--GRFCVA-IQDD------PKYS 413 (446)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~p~i~~~f~g~~~~l~~~~~y~~~~~~--~~~C~~-~~~~------~~~~ 413 (446)
... .. ..+.++|+..+ .+|+|+|+|+|++++||+++ |+++..+ +..|+. +... .+.|
T Consensus 149 ~~~-----~~----g~~~~~C~~~~----~~p~i~f~f~g~~~~l~~~~-y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ 214 (241)
T 1lya_B 149 VPL-----IQ----GEYMIPCEKVS----TLPAITLKLGGKGYKLSPED-YTLKVSQAGKTLCLSGFMGMDIPPPSGPLW 214 (241)
T ss_dssp EEE-----ET----TEEEEEGGGGG----GSCCEEEEETTEEEEECTTT-SEEEETTTTSSEEEESEEECCCCTTTCCCE
T ss_pred eec-----cC----CcEEEECCCCc----cCCeEEEEECCEEEEECHHH-hEEEccCCCCCeeEEEEEecccCCCCCCeE
Confidence 421 11 23458999875 78999999999999999999 9998754 468985 6542 3589
Q ss_pred eechhhhceeEEEEECCCCEEEEEeCC
Q 047238 414 ILGAWQQQNMLIIYDLNVPALRFGSEN 440 (446)
Q Consensus 414 ilG~~fl~~~y~vfD~~~~riGfa~~~ 440 (446)
|||++|||++|+|||++++|||||+++
T Consensus 215 ilG~~fl~~~y~vfD~~~~~igfA~~~ 241 (241)
T 1lya_B 215 ILGDVFIGRYYTVFDRDNNRVGFAEAA 241 (241)
T ss_dssp EECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EechHHhcceEEEEECCCCEEEEEEcC
Confidence 999999999999999999999999874
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.90 E-value=1.1e-23 Score=166.74 Aligned_cols=88 Identities=27% Similarity=0.444 Sum_probs=81.7
Q ss_pred cccce-ecCccEEEEEEECCCCceEEEEEEcCCCceeEeCCCCC----CCCCCCCCCCCCCCCCccceecCCCCCCCCCC
Q 047238 87 HLPMA-KQDLFYSVEVNIGTPMKPQHLLFDTASSLVWTQCQPCI----RCFDQTTPIFDPRASTTYSEIPCDDPLCRSPF 161 (446)
Q Consensus 87 ~~pl~-~~~~~Y~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~~~C~----~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~ 161 (446)
.+||. ..+.+|+++|.||||+|+|.|+|||||+++||+|..|. .| ..++.|||++|+|++...
T Consensus 4 ~~~l~n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C--~~~~~y~p~~SsT~~~~~---------- 71 (97)
T 1lya_A 4 PEVLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIAC--WIHHKYNSDKSSTYVKNG---------- 71 (97)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHH--HTSCCBCGGGCTTCEEEE----------
T ss_pred eEeeEECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCccccc--CCCCCCCchhCCCceeCC----------
Confidence 47887 68899999999999999999999999999999999996 57 468999999999999988
Q ss_pred CCCCCCceeeeeeCCCceEEEEEEEEEEEeec
Q 047238 162 KCQNGKCVYTRRYHVGDVTRGLASRETFAFPV 193 (446)
Q Consensus 162 ~C~~~~~~~~~~Y~~g~~~~G~~~~D~v~l~~ 193 (446)
|.|.+.|++|+ +.|.+++|+|+|++
T Consensus 72 ------~~~~i~Yg~Gs-~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 72 ------TSFDIHYGSGS-LSGYLSQDTVSVPC 96 (97)
T ss_dssp ------EEEEEECSSCE-EEEEEEEEEEEESC
T ss_pred ------CcEEEEECCcE-EEEEEEEEEEEECC
Confidence 88999999999 99999999999984
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.69 E-value=3.1e-17 Score=127.24 Aligned_cols=77 Identities=16% Similarity=0.322 Sum_probs=66.1
Q ss_pred CCccccccCCCCCCcCeEEEEEcCeEEEEcCCCeEEEEcCC--CceEEE-EEc-----CCCceeechhhhceeEEEEECC
Q 047238 359 EFDYCYRYDSSFKAYPSMTFHLQEADYIVQPENMYFIEPDR--GRFCVA-IQD-----DPKYSILGAWQQQNMLIIYDLN 430 (446)
Q Consensus 359 ~~~~C~~~~~~~~~~p~i~~~f~g~~~~l~~~~~y~~~~~~--~~~C~~-~~~-----~~~~~ilG~~fl~~~y~vfD~~ 430 (446)
+.++|...+ .+|+|+|+|+|++++|++++ |+++... ...|++ ++. .++.||||+.|||++|+|||++
T Consensus 3 y~v~C~~~~----~~P~i~f~~gg~~~~l~~~~-yi~~~~~~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~ 77 (87)
T 1b5f_B 3 LQVDCNTLS----SMPNVSFTIGGKKFGLTPEQ-YILKVGKGEATQCISGFTAMDATLLGPLWILGDVFMRPYHTVFDYG 77 (87)
T ss_dssp CEECGGGGG----GCCCEEEEETTEEEEECHHH-HEEEESCTTTCEEEESEEECCCBSSSBEEEECHHHHTTEEEEEETT
T ss_pred EEEECCCCC----cCCcEEEEECCEEEEECHHH-hEEEccCCCCCEEEEEEEECCCCCCCCeEEechHHhccEEEEEECC
Confidence 458999875 79999999999999999999 9998654 368985 554 2357999999999999999999
Q ss_pred CCEEEEEeCC
Q 047238 431 VPALRFGSEN 440 (446)
Q Consensus 431 ~~riGfa~~~ 440 (446)
++|||||+++
T Consensus 78 ~~riGfA~~~ 87 (87)
T 1b5f_B 78 NLLVGFAEAA 87 (87)
T ss_dssp TTEEEEEEEC
T ss_pred CCEEEEEEcC
Confidence 9999999874
No 38
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=94.81 E-value=0.034 Score=46.46 Aligned_cols=31 Identities=16% Similarity=0.194 Sum_probs=27.5
Q ss_pred cCccEEEEEEECCCCceEEEEEEcCCCceeEeC
Q 047238 93 QDLFYSVEVNIGTPMKPQHLLFDTASSLVWTQC 125 (446)
Q Consensus 93 ~~~~Y~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~ 125 (446)
..+.+++++.|+ .+++++++|||++.+-+..
T Consensus 23 ~~~~~~v~v~In--G~~~~~LvDTGAs~s~is~ 53 (148)
T 2i1a_A 23 QVPMLYINIEIN--NYPVKAFVDTGAQTTIMST 53 (148)
T ss_dssp CCCCCEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred ccceEEEEEEEC--CEEEEEEEECCCCccccCH
Confidence 567799999999 8999999999999998854
No 39
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=93.78 E-value=0.077 Score=44.21 Aligned_cols=26 Identities=23% Similarity=0.231 Sum_probs=24.3
Q ss_pred ceeechhhhceeEEEEECCCCEEEEE
Q 047238 412 YSILGAWQQQNMLIIYDLNVPALRFG 437 (446)
Q Consensus 412 ~~ilG~~fl~~~y~vfD~~~~riGfa 437 (446)
..|||..||+++-...|+.+++|-|.
T Consensus 109 d~iLG~d~L~~~~~~ID~~~~~l~l~ 134 (148)
T 2i1a_A 109 DVLIGLDMLKRHLACVDLKENVLRIA 134 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEEET
T ss_pred CeEecHHHHhhCCEEEECCCCEEEEc
Confidence 58999999999999999999999885
No 40
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=89.62 E-value=0.65 Score=38.61 Aligned_cols=27 Identities=22% Similarity=0.170 Sum_probs=24.7
Q ss_pred ceeechhhhceeEEEEECCCCEEEEEe
Q 047238 412 YSILGAWQQQNMLIIYDLNVPALRFGS 438 (446)
Q Consensus 412 ~~ilG~~fl~~~y~vfD~~~~riGfa~ 438 (446)
..|||..||+.+-.+.|++++++-|..
T Consensus 108 d~LLGmD~L~~~~~~ID~~~~~L~l~~ 134 (148)
T 3s8i_A 108 DMLLGLDMLRRHQCSIDLKKNVLVIGT 134 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEECTT
T ss_pred CeeccHHHHHhCCEEEEcCCCEEEEcc
Confidence 579999999999999999999998864
No 41
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=86.96 E-value=0.59 Score=36.25 Aligned_cols=26 Identities=23% Similarity=0.236 Sum_probs=23.6
Q ss_pred EEEEEECCCCceEEEEEEcCCCceeEeC
Q 047238 98 SVEVNIGTPMKPQHLLFDTASSLVWTQC 125 (446)
Q Consensus 98 ~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~ 125 (446)
++.|.|| .|.+++++|||.+++-+..
T Consensus 10 ~v~v~I~--Gq~~e~LLDTGAD~TVl~~ 35 (104)
T 1fmb_A 10 TTIVLIN--DTPLNVLLDTGADTSVLTT 35 (104)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEcc
Confidence 6789999 8999999999999999963
No 42
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=86.44 E-value=0.67 Score=35.55 Aligned_cols=27 Identities=22% Similarity=0.233 Sum_probs=24.0
Q ss_pred EEEEEECCCCceEEEEEEcCCCceeEeCC
Q 047238 98 SVEVNIGTPMKPQHLLFDTASSLVWTQCQ 126 (446)
Q Consensus 98 ~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~~ 126 (446)
+++|.|| .|.+++++|||.+++-+...
T Consensus 10 ~vtvkI~--Gq~~eaLLDTGAD~TVl~~~ 36 (99)
T 2hs1_A 10 LVTIKIG--GQLKEALLDTGADDTIIEEM 36 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSEEESCC
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEecc
Confidence 5789999 89999999999999999643
No 43
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=84.11 E-value=1.1 Score=34.22 Aligned_cols=27 Identities=22% Similarity=0.186 Sum_probs=23.9
Q ss_pred EEEEEECCCCceEEEEEEcCCCceeEeCC
Q 047238 98 SVEVNIGTPMKPQHLLFDTASSLVWTQCQ 126 (446)
Q Consensus 98 ~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~~ 126 (446)
+++|.|| .|.+++++|||.+++-+...
T Consensus 10 ~vti~I~--Gq~~e~LLDTGAD~TVl~~~ 36 (99)
T 3ec0_A 10 VVTAYIE--GQPVEVLLDTGADDSIVAGI 36 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEESSC
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEcCc
Confidence 6779999 99999999999999999543
No 44
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=81.64 E-value=1.3 Score=34.62 Aligned_cols=31 Identities=13% Similarity=0.176 Sum_probs=25.6
Q ss_pred EEEEEEC---CCCceEEEEEEcCCCceeEeCCCC
Q 047238 98 SVEVNIG---TPMKPQHLLFDTASSLVWTQCQPC 128 (446)
Q Consensus 98 ~~~i~iG---tP~Q~~~v~~DTGS~~~Wv~~~~C 128 (446)
.++|.|| +|+|.+..++|||.+++-++...+
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~l 45 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIALF 45 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGS
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecccC
Confidence 5566666 789999999999999999976543
No 45
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=79.04 E-value=1.7 Score=34.29 Aligned_cols=25 Identities=16% Similarity=0.254 Sum_probs=22.4
Q ss_pred EEEEEECCCCceEEEEEEcCCCceeEeC
Q 047238 98 SVEVNIGTPMKPQHLLFDTASSLVWTQC 125 (446)
Q Consensus 98 ~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~ 125 (446)
++ |.|| .|.+++++|||.+++-+..
T Consensus 16 ~v-ikI~--Gq~~eaLLDTGAD~TVi~~ 40 (116)
T 2hah_A 16 IL-IFVN--GYPIKFLLDTGADITVLNR 40 (116)
T ss_dssp EE-EEET--TEEEEEEECTTCSSCEEEG
T ss_pred EE-EEEC--CEEEEEEecCCCCcEEEcc
Confidence 45 9999 8999999999999999864
No 46
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=75.34 E-value=2.8 Score=32.83 Aligned_cols=27 Identities=15% Similarity=0.106 Sum_probs=24.3
Q ss_pred EEEEEECCCCceEEEEEEcCCCceeEeCC
Q 047238 98 SVEVNIGTPMKPQHLLFDTASSLVWTQCQ 126 (446)
Q Consensus 98 ~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~~ 126 (446)
.+.+.|| .|.+.+++|||.+++-+...
T Consensus 11 ~vti~I~--Gq~~eaLLDTGADdTVi~~~ 37 (114)
T 3sqf_A 11 SLTLWLD--DKMFTGLINTGADVTIIKLE 37 (114)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEEGG
T ss_pred eEEEEEC--CEEEEEEEccCCCceEEecc
Confidence 6789999 89999999999999999754
No 47
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=75.28 E-value=2.4 Score=35.13 Aligned_cols=32 Identities=9% Similarity=0.180 Sum_probs=27.4
Q ss_pred cCccEEEEEEECCCCceEEEEEEcCCCceeEeCC
Q 047238 93 QDLFYSVEVNIGTPMKPQHLLFDTASSLVWTQCQ 126 (446)
Q Consensus 93 ~~~~Y~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~~ 126 (446)
....|++++.|+ .+++++++|||++.+.+...
T Consensus 21 ~~~~l~v~~~In--g~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 21 QVTMLYINCKVN--GHPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp -CCCCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred ccCEEEEEEEEC--CEEEEEEEeCCCCcEeeCHH
Confidence 345789999998 89999999999999999654
No 48
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=66.70 E-value=5.9 Score=31.99 Aligned_cols=28 Identities=18% Similarity=0.268 Sum_probs=24.5
Q ss_pred EEEEEEECCCCceEEEEEEcCCCceeEeCC
Q 047238 97 YSVEVNIGTPMKPQHLLFDTASSLVWTQCQ 126 (446)
Q Consensus 97 Y~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~~ 126 (446)
-++.+.|+ .|.+.+++|||.+++-+...
T Consensus 23 P~v~i~I~--G~~~~~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 23 PRITLKVG--GQPVTFLVDTGAQHSVLTQN 50 (132)
T ss_dssp SEEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred CEEEEEEC--CEEEEEEEeCCCCeEEEccc
Confidence 47789999 89999999999999999643
No 49
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=61.32 E-value=6.7 Score=34.10 Aligned_cols=25 Identities=24% Similarity=0.287 Sum_probs=23.2
Q ss_pred EEEEEECCCCceEEEEEEcCCCceeEe
Q 047238 98 SVEVNIGTPMKPQHLLFDTASSLVWTQ 124 (446)
Q Consensus 98 ~~~i~iGtP~Q~~~v~~DTGS~~~Wv~ 124 (446)
.++|.|| .|.+.+++|||.+++-+.
T Consensus 10 ~vtv~I~--Gq~~e~LLDTGAD~TVl~ 34 (203)
T 3ka2_A 10 LVTIRIG--GQLKEALLDTGADDTVIE 34 (203)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEC
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEe
Confidence 6789999 899999999999999995
No 50
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=60.02 E-value=6.4 Score=31.35 Aligned_cols=22 Identities=9% Similarity=0.019 Sum_probs=18.9
Q ss_pred ECCCCceEEEEEEcCCCceeEeCC
Q 047238 103 IGTPMKPQHLLFDTASSLVWTQCQ 126 (446)
Q Consensus 103 iGtP~Q~~~v~~DTGS~~~Wv~~~ 126 (446)
|| .|.+.+++|||.+++-+...
T Consensus 27 i~--gq~~eaLLDTGAD~TVl~~~ 48 (124)
T 2rsp_A 27 QR--SVYITALLDSGADITIISEE 48 (124)
T ss_dssp CS--EEEEEEEECTTCSSCEEETT
T ss_pred CC--CEEEEEEecCCCCcEEEecc
Confidence 66 78889999999999999754
No 51
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=49.16 E-value=14 Score=27.78 Aligned_cols=16 Identities=19% Similarity=0.366 Sum_probs=14.3
Q ss_pred EEEeccCccccccchH
Q 047238 317 FIIDTGTPVTFIRNGP 332 (446)
Q Consensus 317 ~iiDSGTt~~~lp~~~ 332 (446)
++||||++.+++|...
T Consensus 30 v~~DTGSs~lWv~~~~ 45 (97)
T 1lya_A 30 VVFDTGSSNLWVPSIH 45 (97)
T ss_dssp EEEETTCCCEEEEBTT
T ss_pred EEEeCCCCceEEeEcC
Confidence 8999999999999753
No 52
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=41.01 E-value=23 Score=32.93 Aligned_cols=43 Identities=16% Similarity=0.250 Sum_probs=28.4
Q ss_pred CCceeeeeecCCCCCeEEEEeeeEEEecEEEeeCCCccccccCCCCcEEEeccCccccccchHH
Q 047238 270 RDLETTPILLSDLRPHFYLHLLEISIGRHIVRFPPGAFDIMRDGTGGFIIDTGTPVTFIRNGPY 333 (446)
Q Consensus 270 g~l~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~ 333 (446)
|.+...|+.. ...|.++ |.||.+.+ .++||||++.+++|....
T Consensus 4 g~v~~~~~~~---~~~Y~~~---i~iG~Q~~---------------~v~~DTGSs~lWv~~~~C 46 (323)
T 1bxo_A 4 GVATNTPTAN---DEEYITP---VTIGGTTL---------------NLNFDTGSADLWVFSTEL 46 (323)
T ss_dssp EEEEEEECGG---GSCEEEE---EEETTEEE---------------EEEEETTCCCEEECBTTS
T ss_pred CceeeeecCC---CCEEEEE---EEECCEEE---------------EEEEeCCCcceEEecCCC
Confidence 3344455443 4567654 66774443 389999999999997644
No 53
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=40.73 E-value=31 Score=32.08 Aligned_cols=33 Identities=12% Similarity=0.340 Sum_probs=24.2
Q ss_pred CCeEEEEeeeEEEecEEEeeCCCccccccCCCCcEEEeccCccccccchHH
Q 047238 283 RPHFYLHLLEISIGRHIVRFPPGAFDIMRDGTGGFIIDTGTPVTFIRNGPY 333 (446)
Q Consensus 283 ~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~ 333 (446)
...|.++ |.||.+.+ .++||||++.+++|....
T Consensus 13 ~~~Y~~~---i~iG~Q~~---------------~v~~DTGSs~lWv~~~~C 45 (325)
T 1ibq_A 13 DEEYLTP---VTVGKSTL---------------HLDFDTGSADLWVFSDEL 45 (325)
T ss_dssp TSCEEEE---EEEBTEEE---------------EEEEETTCCCEEEECTTS
T ss_pred CCEEEEE---EEECCEEE---------------EEEEeCCCccceEeeCCC
Confidence 4667654 66774443 389999999999997644
No 54
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=40.02 E-value=23 Score=33.00 Aligned_cols=40 Identities=15% Similarity=0.244 Sum_probs=29.0
Q ss_pred ccceecCccEEEE---EEECC---CCceEEEEEEcCCCceeEeCCC
Q 047238 88 LPMAKQDLFYSVE---VNIGT---PMKPQHLLFDTASSLVWTQCQP 127 (446)
Q Consensus 88 ~pl~~~~~~Y~~~---i~iGt---P~Q~~~v~~DTGS~~~Wv~~~~ 127 (446)
.|+....+.|.++ |.||. +.....++||||++++++|...
T Consensus 186 ~p~~~~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lp~~~ 231 (329)
T 3c9x_A 186 TPVDNSQGFWEFTASGYSVGGGKLNRNSIDGIADTGTTLLLLDDNV 231 (329)
T ss_dssp EECBCTTSSCEEEECCEEETTCCCCSCCEEEEECTTCCSEEECHHH
T ss_pred EEccCCCceEEEEEeeEEECCEeccCCCceEEEECCCCcEeCCHHH
Confidence 4444345677776 57875 2467899999999999998753
No 55
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=39.43 E-value=25 Score=30.54 Aligned_cols=27 Identities=22% Similarity=0.191 Sum_probs=23.7
Q ss_pred EEEEEEECCCCceEEEEEEcCCCceeEeC
Q 047238 97 YSVEVNIGTPMKPQHLLFDTASSLVWTQC 125 (446)
Q Consensus 97 Y~~~i~iGtP~Q~~~v~~DTGS~~~Wv~~ 125 (446)
=.+++.|| .|.+.+++|||.+++-+..
T Consensus 113 P~~~iki~--Gq~~e~LlDTGAD~TVl~~ 139 (203)
T 3ka2_A 113 PLVTIRIG--GQLKEALLDTGADDTVIEE 139 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred CcEEEEEC--CEEEeeeecccCCceeeec
Confidence 36789999 8999999999999999953
No 56
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=38.48 E-value=25 Score=32.67 Aligned_cols=42 Identities=17% Similarity=0.370 Sum_probs=27.6
Q ss_pred CceeeeeecCCCCCeEEEEeeeEEEecEEEeeCCCccccccCCCCcEEEeccCccccccchHH
Q 047238 271 DLETTPILLSDLRPHFYLHLLEISIGRHIVRFPPGAFDIMRDGTGGFIIDTGTPVTFIRNGPY 333 (446)
Q Consensus 271 ~l~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~ 333 (446)
.+.-.|+.. ...|.++ |.||.+.+ .++||||++.+++|....
T Consensus 5 ~v~~~~~~~---~~~Y~~~---i~iG~q~~---------------~v~~DTGSs~lWv~~~~C 46 (323)
T 1izd_A 5 SVTTNPTSN---DEEYITQ---VTVGDDTL---------------GLDFDTGSADLWVFSSQT 46 (323)
T ss_dssp EEEEEECGG---GCCEEEE---EEETTEEE---------------EEEEETTCCCEEECBTTS
T ss_pred ceeeeEcCC---CCEEEEE---EEECCEEE---------------EEEEcCCCcceEEecCCC
Confidence 334445433 4566654 66774433 389999999999997644
No 57
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=37.13 E-value=44 Score=31.51 Aligned_cols=43 Identities=21% Similarity=0.338 Sum_probs=30.1
Q ss_pred CCceeeeeecCCCCCeEEEEeeeEEEe--cEEEeeCCCccccccCCCCcEEEeccCccccccch
Q 047238 270 RDLETTPILLSDLRPHFYLHLLEISIG--RHIVRFPPGAFDIMRDGTGGFIIDTGTPVTFIRNG 331 (446)
Q Consensus 270 g~l~~~p~~~~~~~~~w~v~l~~i~v~--~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~ 331 (446)
|.+..+|+.... ...|.++ |.|| .+.+ .++||||++.+++|..
T Consensus 5 g~~~~~~l~~~~-~~~Y~~~---i~iGtP~q~~---------------~v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 5 GSVDTPGLYDFD-LEEYAIP---VSIGTPGQDF---------------YLLFDTGSSDTWVPHK 49 (361)
T ss_dssp CCEEEEEEEETT-TTEEEEE---EEETTTTEEE---------------EEEEETTCCCCEEEBT
T ss_pred CccceEEeecCC-CCEEEEE---EEECCCCcEE---------------EEEEcCCCCCeEECCC
Confidence 666677877632 3567654 6677 3333 3899999999999975
No 58
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=37.13 E-value=35 Score=31.69 Aligned_cols=16 Identities=25% Similarity=0.318 Sum_probs=14.3
Q ss_pred EEEeccCccccccchH
Q 047238 317 FIIDTGTPVTFIRNGP 332 (446)
Q Consensus 317 ~iiDSGTt~~~lp~~~ 332 (446)
++||||++.+++|...
T Consensus 32 v~~DTGSs~lWv~~~~ 47 (325)
T 2apr_A 32 LDFDTGSSDLWIASTL 47 (325)
T ss_dssp EEEETTCCCCEEEBTT
T ss_pred EEEcCCCCCEEEccCC
Confidence 8999999999999753
No 59
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=36.61 E-value=34 Score=32.94 Aligned_cols=42 Identities=7% Similarity=0.100 Sum_probs=27.1
Q ss_pred eeeeecCCCCCeEEEEeeeEEEecEEEeeCCCccccccCCCCcEEEeccCccccccch
Q 047238 274 TTPILLSDLRPHFYLHLLEISIGRHIVRFPPGAFDIMRDGTGGFIIDTGTPVTFIRNG 331 (446)
Q Consensus 274 ~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~ 331 (446)
.+|+..+.....|.++ |.||. ++..+ .++||||++.+++|..
T Consensus 11 ~~pl~~~~~~~~Y~~~---i~iGT-----P~Q~~--------~v~~DTGSs~lWv~~~ 52 (403)
T 3aup_A 11 VLPVQNDGSTGLHWAN---LQKRT-----PLMQV--------PVLVDLNGNHLWVNCE 52 (403)
T ss_dssp EEEEEECTTTCCEEEE---EEETT-----TTEEE--------EEEEETTCSSEEEECS
T ss_pred EEeeecCCCCceEEEE---EECCC-----CCcee--------EEEEECCCCceeECCC
Confidence 3677644334667654 56773 22222 3899999999999865
No 60
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=35.15 E-value=47 Score=30.77 Aligned_cols=45 Identities=20% Similarity=0.437 Sum_probs=28.4
Q ss_pred CceeeeeecCCCCCeEEEEeeeEEEecEEEeeCCCccccccCCCCcEEEeccCccccccchH
Q 047238 271 DLETTPILLSDLRPHFYLHLLEISIGRHIVRFPPGAFDIMRDGTGGFIIDTGTPVTFIRNGP 332 (446)
Q Consensus 271 ~l~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~ 332 (446)
++...|+.... +..|.++ |.||. |+..+ .++||||++.+++|...
T Consensus 2 ~~~~~~l~n~~-~~~Y~~~---i~iGt-----P~q~~--------~v~~DTGSs~~Wv~~~~ 46 (323)
T 3cms_A 2 EVASVPLTNYL-DSQYFGK---IYLGT-----PPQEF--------TVLFDTGSSDFWVPSIY 46 (323)
T ss_dssp CCEEEEEEEET-TTEEEEE---EEETT-----TTEEE--------EEEEETTCCCEEEEBTT
T ss_pred CcceeeeEecc-CCEEEEE---EEECC-----CCeEE--------EEEEeCCccceEEcCCC
Confidence 44556666532 3566654 66773 22221 38999999999999753
No 61
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=35.13 E-value=30 Score=33.57 Aligned_cols=46 Identities=11% Similarity=0.164 Sum_probs=31.1
Q ss_pred CCceeeeeecCCCCCeEEEEeeeEEEecEEEeeCCCccccccCCCCcEEEeccCccccccch
Q 047238 270 RDLETTPILLSDLRPHFYLHLLEISIGRHIVRFPPGAFDIMRDGTGGFIIDTGTPVTFIRNG 331 (446)
Q Consensus 270 g~l~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~ 331 (446)
.+-..+|+..+.....|.++ |.||. |+..+ .++||||+.++++|-+
T Consensus 6 ~~~~~~pv~~d~~~~~Y~~~---i~iGT-----Ppq~~--------~v~~DTGS~~lWv~c~ 51 (413)
T 3vla_A 6 PSALVVPVKKDASTLQYVTT---INQRT-----PLVSE--------NLVVDLGGRFLWVDCD 51 (413)
T ss_dssp CSEEEEEEEECTTTCCEEEE---EEETT-----TTEEE--------EEEEETTCSSEEEECS
T ss_pred CccEEEEeeecCCCCeEEEE---EEcCC-----CCcce--------EEEEeCCChhhhcccC
Confidence 34456788887655667655 55663 22222 3899999999999964
No 62
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=30.99 E-value=57 Score=30.25 Aligned_cols=16 Identities=19% Similarity=0.314 Sum_probs=14.4
Q ss_pred EEEeccCccccccchH
Q 047238 317 FIIDTGTPVTFIRNGP 332 (446)
Q Consensus 317 ~iiDSGTt~~~lp~~~ 332 (446)
++||||++.+++|...
T Consensus 32 v~~DTGSs~lWv~~~~ 47 (329)
T 1oew_A 32 LDFDTGSSDLWVFSSE 47 (329)
T ss_dssp EEEETTCCCEEECBTT
T ss_pred EEECCCCCCeEEecCC
Confidence 8999999999999753
No 63
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=29.94 E-value=50 Score=29.07 Aligned_cols=33 Identities=18% Similarity=0.232 Sum_probs=24.7
Q ss_pred CccEEEE---EEECC-----CCceEEEEEEcCCCceeEeCC
Q 047238 94 DLFYSVE---VNIGT-----PMKPQHLLFDTASSLVWTQCQ 126 (446)
Q Consensus 94 ~~~Y~~~---i~iGt-----P~Q~~~v~~DTGS~~~Wv~~~ 126 (446)
.+.|.++ |.||. +.....++||||++++++|..
T Consensus 187 ~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~ 227 (239)
T 1b5f_A 187 QYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTA 227 (239)
T ss_dssp ETTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHH
T ss_pred CCeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHH
Confidence 4567665 67875 234578999999999999753
No 64
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=24.19 E-value=66 Score=28.15 Aligned_cols=33 Identities=18% Similarity=0.327 Sum_probs=24.4
Q ss_pred CccEEEE---EEECCC----CceEEEEEEcCCCceeEeCC
Q 047238 94 DLFYSVE---VNIGTP----MKPQHLLFDTASSLVWTQCQ 126 (446)
Q Consensus 94 ~~~Y~~~---i~iGtP----~Q~~~v~~DTGS~~~Wv~~~ 126 (446)
...|.++ |.||.- .....+++|||++++++|..
T Consensus 98 ~~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~ 137 (241)
T 1lya_B 98 KAYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVD 137 (241)
T ss_dssp BTTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHH
T ss_pred ccEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHH
Confidence 4566664 668752 34578999999999999775
No 65
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=23.88 E-value=64 Score=25.82 Aligned_cols=25 Identities=24% Similarity=0.583 Sum_probs=20.1
Q ss_pred eEEEecEEEeeCCCccccccCCCCcEEEeccCccccccch
Q 047238 292 EISIGRHIVRFPPGAFDIMRDGTGGFIIDTGTPVTFIRNG 331 (446)
Q Consensus 292 ~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~ 331 (446)
.+.|+|+.+. +++|||...+.|++.
T Consensus 26 ~i~I~G~~~~---------------~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 26 TLKVGGQPVT---------------FLVDTGAQHSVLTQN 50 (132)
T ss_dssp EEEETTEEEE---------------EEECTTCSSCEECSC
T ss_pred EEEECCEEEE---------------EEEeCCCCeEEEccc
Confidence 3778887654 899999999999864
No 66
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=23.03 E-value=45 Score=31.75 Aligned_cols=35 Identities=11% Similarity=0.328 Sum_probs=24.2
Q ss_pred eeeecCCCCCeEEEEeeeEEEecEEEeeCCCccccccCCCCcEEEeccCccccccc
Q 047238 275 TPILLSDLRPHFYLHLLEISIGRHIVRFPPGAFDIMRDGTGGFIIDTGTPVTFIRN 330 (446)
Q Consensus 275 ~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~ 330 (446)
+|+..+.....|.++ |.||. +++||||++.+++|-
T Consensus 5 ~pv~~~~~~~~Y~~~---i~iGt------------------Pv~~DTGSs~lWv~c 39 (381)
T 1t6e_X 5 APVTKDPATSLYTIP---FHDGA------------------SLVLDVAGPLVWSTC 39 (381)
T ss_dssp EEEEECTTTCCEEEE---EETTE------------------EEEEETTCCCEEECC
T ss_pred EeEEecCCCcEEEEE---EeCCC------------------EEEEECCCCceEEeC
Confidence 466654444667655 44552 289999999999995
No 67
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=22.04 E-value=57 Score=30.32 Aligned_cols=15 Identities=7% Similarity=0.129 Sum_probs=13.8
Q ss_pred EEEeccCccccccch
Q 047238 317 FIIDTGTPVTFIRNG 331 (446)
Q Consensus 317 ~iiDSGTt~~~lp~~ 331 (446)
++||||++.+++|..
T Consensus 32 v~~DTGSs~lWv~~~ 46 (330)
T 1yg9_A 32 TVFDSTSCNVVVASQ 46 (330)
T ss_dssp EEEETTCCCEEEECT
T ss_pred EEEeCCCcceEEecC
Confidence 899999999999965
No 68
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=21.39 E-value=84 Score=29.11 Aligned_cols=15 Identities=33% Similarity=0.578 Sum_probs=13.7
Q ss_pred EEEeccCccccccch
Q 047238 317 FIIDTGTPVTFIRNG 331 (446)
Q Consensus 317 ~iiDSGTt~~~lp~~ 331 (446)
++||||++.+++|..
T Consensus 29 v~~DTGSs~~Wv~~~ 43 (339)
T 3fv3_A 29 VIIDTGSSDFWVVDS 43 (339)
T ss_dssp EEEETTCCCEEEEEE
T ss_pred EEEeCCCCceEEecC
Confidence 899999999999854
No 69
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=21.16 E-value=86 Score=29.05 Aligned_cols=15 Identities=27% Similarity=0.545 Sum_probs=13.6
Q ss_pred EEEeccCccccccch
Q 047238 317 FIIDTGTPVTFIRNG 331 (446)
Q Consensus 317 ~iiDSGTt~~~lp~~ 331 (446)
++||||++.+++|..
T Consensus 29 v~~DTGSs~~Wv~~~ 43 (334)
T 1j71_A 29 VVIDTGSSDLWVVDT 43 (334)
T ss_dssp EEEETTCCCEEEEEE
T ss_pred EEEcCCCCCEEEecC
Confidence 899999999999854
No 70
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=21.05 E-value=47 Score=25.15 Aligned_cols=30 Identities=30% Similarity=0.481 Sum_probs=22.4
Q ss_pred EEEEeeeEEEecEEEeeCCCccccccCCCCcEEEeccCccccccc
Q 047238 286 FYLHLLEISIGRHIVRFPPGAFDIMRDGTGGFIIDTGTPVTFIRN 330 (446)
Q Consensus 286 w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~ 330 (446)
|.=.+..+.|+|+... +++|||.-.+.+.+
T Consensus 6 ~~rP~vtvkI~Gq~~e---------------aLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 6 WKRPLVTIKIGGQLKE---------------ALLDTGADDTIIEE 35 (99)
T ss_dssp SSCCEEEEEETTEEEE---------------EEECTTCSSEEESC
T ss_pred cCCCEEEEEECCEEEE---------------EEeccCCCcEEEec
Confidence 3334455888888664 89999999888874
No 71
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=20.90 E-value=70 Score=24.95 Aligned_cols=31 Identities=23% Similarity=0.410 Sum_probs=25.1
Q ss_pred CeEEEEeeeEEEecEEEeeCCCccccccCCCCcEEEeccCccccccc
Q 047238 284 PHFYLHLLEISIGRHIVRFPPGAFDIMRDGTGGFIIDTGTPVTFIRN 330 (446)
Q Consensus 284 ~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~ 330 (446)
..|.=.+. +.|+|+.+. +++|||.-.+.+.+
T Consensus 10 ~l~~rP~v-ikI~Gq~~e---------------aLLDTGAD~TVi~~ 40 (116)
T 2hah_A 10 LEKRPEIL-IFVNGYPIK---------------FLLDTGADITVLNR 40 (116)
T ss_dssp SSSCCEEE-EEETTEEEE---------------EEECTTCSSCEEEG
T ss_pred cccCCCEE-EEECCEEEE---------------EEecCCCCcEEEcc
Confidence 45666777 999998764 89999999888874
No 72
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=20.55 E-value=78 Score=29.37 Aligned_cols=15 Identities=27% Similarity=0.521 Sum_probs=13.7
Q ss_pred EEEeccCccccccch
Q 047238 317 FIIDTGTPVTFIRNG 331 (446)
Q Consensus 317 ~iiDSGTt~~~lp~~ 331 (446)
++||||++.+++|..
T Consensus 29 v~~DTGSs~~Wv~~~ 43 (342)
T 3pvk_A 29 VIVDTGSSDLWVPDV 43 (342)
T ss_dssp EEEETTCCCEEEEEE
T ss_pred EEEECCCcceEEEcC
Confidence 899999999999864
Done!