BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047239
(180 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|302758308|ref|XP_002962577.1| hypothetical protein SELMODRAFT_270329 [Selaginella moellendorffii]
gi|302824582|ref|XP_002993933.1| hypothetical protein SELMODRAFT_163230 [Selaginella moellendorffii]
gi|300138205|gb|EFJ04980.1| hypothetical protein SELMODRAFT_163230 [Selaginella moellendorffii]
gi|300169438|gb|EFJ36040.1| hypothetical protein SELMODRAFT_270329 [Selaginella moellendorffii]
Length = 199
Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 131/178 (73%), Positives = 155/178 (87%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+N++CKLDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+VCT
Sbjct: 22 PTLQNIVSTVNMDCKLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 81
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE Q+KLAARKYARI+QK+GFP QFKDFKIQNIVGSCDV+FPI+LE L H FS+
Sbjct: 82 GAKSEQQSKLAARKYARIIQKLGFPAQFKDFKIQNIVGSCDVKFPIRLEGLAYAHGHFSS 141
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYDQ 180
YEPELFPGLIYRMK+P + +LIF+SGK+V+TGAK R++IY AF NIYPVL + Q
Sbjct: 142 YEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDEIYEAFENIYPVLTEFRKMQQ 199
>gi|168003287|ref|XP_001754344.1| TATA-box binding protein, component of TFIID and TFIIIB
[Physcomitrella patens subsp. patens]
gi|162694446|gb|EDQ80794.1| TATA-box binding protein, component of TFIID and TFIIIB
[Physcomitrella patens subsp. patens]
Length = 214
Score = 285 bits (728), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 129/180 (71%), Positives = 156/180 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+N++C+L+LK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 21 IVPTLQNIVSTVNMDCRLELKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 80
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q+KLAARKYARI+QK+GFP QFKDFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 81 CTGAKSEQQSKLAARKYARIIQKLGFPAQFKDFKIQNIVGSCDVKFPIRLEGLAYAHGHF 140
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYDQ 180
S+YEPELFPGLIYRMK+P + +LIF+SGK+V+TGAK R++IY AF NIYPVL + Q
Sbjct: 141 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDEIYEAFENIYPVLTEFRKIQQ 200
>gi|255568956|ref|XP_002525448.1| TATA-box binding protein, putative [Ricinus communis]
gi|223535261|gb|EEF36938.1| TATA-box binding protein, putative [Ricinus communis]
Length = 201
Score = 283 bits (725), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 130/180 (72%), Positives = 155/180 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL+CKLDLK+IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 22 IVPTLQNIVSTVNLDCKLDLKQIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 81
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q+KLAARKYARI+QK+GFP +FKDFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 82 CTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 141
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYDQ 180
S+YEPELFPGLIYRMK+P + +LIF+SGK+VITGAK R++ Y AF NIYPVL + Q
Sbjct: 142 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQQ 201
>gi|357155673|ref|XP_003577198.1| PREDICTED: TATA-box-binding protein 2-like [Brachypodium
distachyon]
Length = 202
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 129/180 (71%), Positives = 155/180 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P++QNIV+T+NL+CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 23 IVPMLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 82
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q+KLAARKYARI+QK+GFP +FKDFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 83 CTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 142
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYDQ 180
S+YEPELFPGLIYRM++P + +LIF+SGK+V+TGAK RE+ Y AF NIYPVL + Q
Sbjct: 143 SSYEPELFPGLIYRMRQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLTEFRKVQQ 202
>gi|357119735|ref|XP_003561589.1| PREDICTED: TATA-box-binding protein 2-like [Brachypodium
distachyon]
Length = 200
Score = 283 bits (724), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 130/178 (73%), Positives = 153/178 (85%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL+CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+VCT
Sbjct: 23 PTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 82
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE Q+KLAARKYARI+QK+GFP +FKDFKIQNIVGSCDV+FPI+LE L H FS+
Sbjct: 83 GAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 142
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYDQ 180
YEPELFPGLIYRMK+P + +LIF+SGK+V+TGAK RE+ Y AF NIYPVL + Q
Sbjct: 143 YEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLTEFRKVQQ 200
>gi|162459971|ref|NP_001105319.1| TATA-box-binding protein 2 [Zea mays]
gi|1729908|sp|P50159.1|TBP2_MAIZE RecName: Full=TATA-box-binding protein 2; AltName: Full=TATA
sequence-binding protein 2; Short=TBP-2; AltName:
Full=TATA-binding factor 2; AltName: Full=TATA-box
factor 2; AltName: Full=Transcription initiation factor
TFIID TBP-2 subunit
gi|293906|gb|AAA65942.1| TATA-binding protein [Zea mays]
gi|195604414|gb|ACG24037.1| TATA-binding protein 2 [Zea mays]
gi|238014342|gb|ACR38206.1| unknown [Zea mays]
gi|413933540|gb|AFW68091.1| TATA-binding protein2 [Zea mays]
Length = 200
Score = 283 bits (724), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 130/180 (72%), Positives = 155/180 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL+CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 21 IVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 80
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q+KLAARKYARI+QK+GFP +FKDFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 81 CTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 140
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYDQ 180
S+YEPELFPGLIYRMK+P + +LIF+SGK+V+TGAK RE+ Y AF NIYPVL+ + Q
Sbjct: 141 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLSEFRKIQQ 200
>gi|242038657|ref|XP_002466723.1| hypothetical protein SORBIDRAFT_01g012880 [Sorghum bicolor]
gi|241920577|gb|EER93721.1| hypothetical protein SORBIDRAFT_01g012880 [Sorghum bicolor]
Length = 200
Score = 283 bits (724), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 130/180 (72%), Positives = 154/180 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL+CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 21 IVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 80
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q+KLAARKYARI+QK+GFP +FKDFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 81 CTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 140
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYDQ 180
S+YEPELFPGLIYRMK+P + +LIF+SGK+V+TGAK RE+ Y AF NIYPVL + Q
Sbjct: 141 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLTEFRKVQQ 200
>gi|413933539|gb|AFW68090.1| TATA-binding protein2, partial [Zea mays]
Length = 205
Score = 283 bits (723), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 130/180 (72%), Positives = 155/180 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL+CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 21 IVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 80
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q+KLAARKYARI+QK+GFP +FKDFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 81 CTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 140
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYDQ 180
S+YEPELFPGLIYRMK+P + +LIF+SGK+V+TGAK RE+ Y AF NIYPVL+ + Q
Sbjct: 141 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLSEFRKIQQ 200
>gi|974216|emb|CAA62224.1| TATA-box binding protein [Zea mays]
Length = 215
Score = 283 bits (723), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 129/172 (75%), Positives = 152/172 (88%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL+CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 21 IVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 80
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q+KLAARKYARI+QK+GFP +FKDFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 81 CTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 140
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRMK+P + +LIF+SGK+V+TGAK RE+ Y AF NIYPVL
Sbjct: 141 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVL 192
>gi|449452638|ref|XP_004144066.1| PREDICTED: TATA-box-binding protein-like [Cucumis sativus]
gi|449493574|ref|XP_004159356.1| PREDICTED: TATA-box-binding protein-like [Cucumis sativus]
Length = 200
Score = 283 bits (723), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 129/175 (73%), Positives = 153/175 (87%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL+CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 21 IVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 80
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q+KLAARKYARI+QK+GFP +FKDFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 81 CTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 140
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRMK+P + +LIF+SGK+V+TGAK RE+ Y AF NIYPVL +
Sbjct: 141 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLTEF 195
>gi|414872052|tpg|DAA50609.1| TPA: TATA-box-binding protein 1(TATA-binding factor 1)(TATA
sequence-binding protein 1) [Zea mays]
Length = 215
Score = 283 bits (723), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 129/172 (75%), Positives = 152/172 (88%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL+CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 21 IVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 80
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q+KLAARKYARI+QK+GFP +FKDFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 81 CTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 140
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRMK+P + +LIF+SGK+V+TGAK RE+ Y AF NIYPVL
Sbjct: 141 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVL 192
>gi|162459891|ref|NP_001105318.1| TATA-box-binding protein 1 [Zea mays]
gi|1729907|sp|P50158.1|TBP1_MAIZE RecName: Full=TATA-box-binding protein 1; AltName: Full=TATA
sequence-binding protein 1; Short=TBP-1; AltName:
Full=TATA-binding factor 1; AltName: Full=TATA-box
factor 1; AltName: Full=Transcription initiation factor
TFIID TBP-1 subunit
gi|293904|gb|AAA65941.1| TATA-binding protein [Zea mays]
gi|414872053|tpg|DAA50610.1| TPA: TATA-box-binding protein 1(TATA-binding factor 1)(TATA
sequence-binding protein 1) [Zea mays]
Length = 200
Score = 283 bits (723), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 129/172 (75%), Positives = 152/172 (88%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL+CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 21 IVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 80
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q+KLAARKYARI+QK+GFP +FKDFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 81 CTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 140
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRMK+P + +LIF+SGK+V+TGAK RE+ Y AF NIYPVL
Sbjct: 141 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVL 192
>gi|326522452|dbj|BAK07688.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 233
Score = 283 bits (723), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 128/175 (73%), Positives = 154/175 (88%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ PV+QNIV+T+NL+C+LDLK+IAL ARNAEYNP RF+AV MRI++PKTTALIF+SGK+V
Sbjct: 54 IVPVLQNIVSTVNLDCRLDLKQIALQARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMV 113
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE +KLAARKYARIVQK+GFP FKDFKIQNIV SCDV+FPI+LE L H F
Sbjct: 114 CTGAKSEEHSKLAARKYARIVQKLGFPATFKDFKIQNIVASCDVKFPIRLEGLAYSHGAF 173
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRMK+P + +L+F+SGK+V+TGAK R++IYAAF NIYPVL Y
Sbjct: 174 SSYEPELFPGLIYRMKQPKIVLLVFVSGKIVLTGAKVRDEIYAAFENIYPVLTEY 228
>gi|135641|sp|P26356.1|TBP1_WHEAT RecName: Full=TATA-box-binding protein 1; AltName: Full=TATA
sequence-binding protein 1; Short=TBP-1; AltName:
Full=TATA-binding factor 1; AltName: Full=TATA-box
factor 1; AltName: Full=Transcription initiation factor
TFIID TBP-1 subunit
gi|21875|emb|CAA42531.1| TATA binding protein (TFIID) [Triticum aestivum]
Length = 233
Score = 282 bits (722), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 128/175 (73%), Positives = 154/175 (88%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ PV+QNIV+T+NL+C+LDLK+IAL ARNAEYNP RF+AV MRI++PKTTALIF+SGK+V
Sbjct: 54 IVPVLQNIVSTVNLDCRLDLKQIALQARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMV 113
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE +KLAARKYARIVQK+GFP FKDFKIQNIV SCDV+FPI+LE L H F
Sbjct: 114 CTGAKSEEHSKLAARKYARIVQKLGFPATFKDFKIQNIVASCDVKFPIRLEGLAYSHGAF 173
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRMK+P + +L+F+SGK+V+TGAK R++IYAAF NIYPVL Y
Sbjct: 174 SSYEPELFPGLIYRMKQPKIVLLVFVSGKIVLTGAKVRDEIYAAFENIYPVLTEY 228
>gi|135640|sp|P26357.1|TBP_SOLTU RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; Short=TBP; AltName:
Full=TATA-binding factor; AltName: Full=TATA-box factor;
AltName: Full=Transcription initiation factor TFIID TBP
subunit
gi|21581|emb|CAA44360.1| TATA-binding protein [Solanum tuberosum]
Length = 200
Score = 282 bits (722), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 129/175 (73%), Positives = 153/175 (87%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL+CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 21 IVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 80
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q+KLAARKYARI+QK+GFP +FKDFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 81 CTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYAHGAF 140
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRMK+P + +LIF+SGK+VITGAK R++ Y AF NIYPVL +
Sbjct: 141 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEF 195
>gi|357146320|ref|XP_003573949.1| PREDICTED: TATA-box-binding protein 1-like [Brachypodium
distachyon]
Length = 235
Score = 282 bits (722), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 128/175 (73%), Positives = 154/175 (88%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ PV+QNIV+T+NL+C+LDLK+IAL ARNAEYNP RF+AV MRI++PKTTALIF+SGK+V
Sbjct: 56 IVPVLQNIVSTVNLDCRLDLKQIALQARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMV 115
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE +KLAARKYARIVQK+GFP FKDFKIQNIV SCDV+FPI+LE L H F
Sbjct: 116 CTGAKSEEHSKLAARKYARIVQKLGFPATFKDFKIQNIVASCDVKFPIRLEGLAYSHGAF 175
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRMK+P + +L+F+SGK+V+TGAK R++IYAAF NIYPVL Y
Sbjct: 176 SSYEPELFPGLIYRMKQPKIVLLVFVSGKIVLTGAKVRDEIYAAFENIYPVLTEY 230
>gi|1351224|sp|P48511.1|TBP_MESCR RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; Short=TBP; AltName:
Full=TATA-binding factor; AltName: Full=TATA-box factor;
AltName: Full=Transcription initiation factor TFIID TBP
subunit
gi|841440|gb|AAA80641.1| TATA-binding protein [Mesembryanthemum crystallinum]
Length = 200
Score = 282 bits (721), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 129/175 (73%), Positives = 153/175 (87%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL+CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 21 IVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 80
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q+KLAARKYARI+QK+GFP +FKDFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 81 CTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 140
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRMK+P + +LIF+SGK+V+TGAK RE+ Y AF NIYPVL +
Sbjct: 141 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLTEF 195
>gi|224285248|gb|ACN40350.1| unknown [Picea sitchensis]
Length = 200
Score = 281 bits (720), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 129/178 (72%), Positives = 152/178 (85%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL+CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+VCT
Sbjct: 23 PTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 82
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE Q+KLAARKYARI+QK+GFP FKDFKIQNIVGSCDV+FPI+LE L H FS+
Sbjct: 83 GAKSEQQSKLAARKYARIIQKLGFPAHFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 142
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYDQ 180
YEPELFPGLIYRMK+P + +LIF+SGK+V+TGAK R++ Y AF NIYPVL + Q
Sbjct: 143 YEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKIQQ 200
>gi|242084298|ref|XP_002442574.1| hypothetical protein SORBIDRAFT_08g022273 [Sorghum bicolor]
gi|241943267|gb|EES16412.1| hypothetical protein SORBIDRAFT_08g022273 [Sorghum bicolor]
Length = 200
Score = 281 bits (720), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 129/180 (71%), Positives = 154/180 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL+CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 21 IVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 80
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q+KLAARKYARI+QK+GFP +FKDFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 81 CTGAKSEHQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 140
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYDQ 180
S+YEPELFPGLIYRMK+P + +LIF+SGK+V+TGAK R++ Y AF NIYPVL + Q
Sbjct: 141 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKVQQ 200
>gi|115454423|ref|NP_001050812.1| Os03g0657000 [Oryza sativa Japonica Group]
gi|73919858|sp|Q8W0W4.2|TBP2_ORYSJ RecName: Full=TATA-binding protein 2; AltName: Full=TATA
sequence-binding protein 2; Short=TBP-2; AltName:
Full=TATA-binding factor 2; AltName: Full=TATA-box
factor 2; AltName: Full=Transcription initiation factor
TFIID TBP-2 subunit
gi|31415973|gb|AAP50993.1| TATA-binding protein TBP2 [Oryza sativa Japonica Group]
gi|108710181|gb|ABF97976.1| TATA-binding protein 2, putative, expressed [Oryza sativa Japonica
Group]
gi|113549283|dbj|BAF12726.1| Os03g0657000 [Oryza sativa Japonica Group]
gi|215686467|dbj|BAG87728.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 203
Score = 281 bits (720), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 129/178 (72%), Positives = 153/178 (85%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL+CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+VCT
Sbjct: 26 PTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 85
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE Q+KLAARKYARI+QK+GFP +FKDFKIQNIVGSCDV+FPI+LE L H FS+
Sbjct: 86 GAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 145
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYDQ 180
YEPELFPGLIYRMK+P + +LIF+SGK+V+TGAK R++ Y AF NIYPVL + Q
Sbjct: 146 YEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKVQQ 203
>gi|222625492|gb|EEE59624.1| hypothetical protein OsJ_11965 [Oryza sativa Japonica Group]
Length = 207
Score = 281 bits (719), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 129/178 (72%), Positives = 153/178 (85%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL+CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+VCT
Sbjct: 26 PTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 85
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE Q+KLAARKYARI+QK+GFP +FKDFKIQNIVGSCDV+FPI+LE L H FS+
Sbjct: 86 GAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 145
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYDQ 180
YEPELFPGLIYRMK+P + +LIF+SGK+V+TGAK R++ Y AF NIYPVL + Q
Sbjct: 146 YEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKVQQ 203
>gi|4102725|gb|AAD10238.1| TATA-box binding protein [Phaseolus vulgaris]
Length = 200
Score = 281 bits (719), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 128/175 (73%), Positives = 153/175 (87%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL+CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 21 IVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 80
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q+KLAARKYARI+QK+GFP +FKDFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 81 CTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 140
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRMK+P + +LIF+SGK+V+TGAK R++ Y AF NIYPVL +
Sbjct: 141 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEF 195
>gi|4102723|gb|AAD10237.1| TATA-box binding protein [Phaseolus vulgaris]
Length = 200
Score = 281 bits (719), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 128/175 (73%), Positives = 153/175 (87%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL+CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 21 IVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 80
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q+KLAARKYARI+QK+GFP +FKDFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 81 CTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 140
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRMK+P + +LIF+SGK+V+TGAK R++ Y AF NIYPVL +
Sbjct: 141 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEF 195
>gi|332374462|gb|AEE62372.1| unknown [Dendroctonus ponderosae]
Length = 318
Score = 281 bits (719), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 127/173 (73%), Positives = 153/173 (88%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 143 PQLQNIVSTVNLSCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 202
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++LAARKYARI+QK+GFP +F DFKIQN+VGSCDV+FPI+LE L H+ FS+
Sbjct: 203 GAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHSSFSS 262
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R++IY AF+NIYP+L +
Sbjct: 263 YEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYEAFDNIYPILKSF 315
>gi|218184579|gb|EEC67006.1| hypothetical protein OsI_33717 [Oryza sativa Indica Group]
Length = 226
Score = 281 bits (719), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 129/180 (71%), Positives = 156/180 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL+C+LDLKKIAL ARNAEYNP RF+AV MRI++PKTTALIF+SGK+V
Sbjct: 45 IVPTLQNIVSTVNLDCRLDLKKIALQARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMV 104
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE +KLAARKYARIVQK+GFP +FKDFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 105 CTGAKSEDHSKLAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 164
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYDQ 180
S+YEPELFPGLIYRMK+P + +LIF+SGK+V+TGAK R++IYAAF N++PVL Y Q
Sbjct: 165 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKYRKEIYAAFENMFPVLTEYRKTQQ 224
>gi|125574885|gb|EAZ16169.1| hypothetical protein OsJ_31618 [Oryza sativa Japonica Group]
Length = 224
Score = 281 bits (719), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 129/180 (71%), Positives = 156/180 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL+C+LDLKKIAL ARNAEYNP RF+AV MRI++PKTTALIF+SGK+V
Sbjct: 43 IVPTLQNIVSTVNLDCRLDLKKIALQARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMV 102
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE +KLAARKYARIVQK+GFP +FKDFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 103 CTGAKSEDHSKLAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 162
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYDQ 180
S+YEPELFPGLIYRMK+P + +LIF+SGK+V+TGAK R++IYAAF N++PVL Y Q
Sbjct: 163 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKYRKEIYAAFENMFPVLTEYRKTQQ 222
>gi|115482150|ref|NP_001064668.1| Os10g0432300 [Oryza sativa Japonica Group]
gi|78708692|gb|ABB47667.1| TATA-box binding protein 1, putative, expressed [Oryza sativa
Japonica Group]
gi|113639277|dbj|BAF26582.1| Os10g0432300 [Oryza sativa Japonica Group]
Length = 223
Score = 281 bits (719), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 129/180 (71%), Positives = 156/180 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL+C+LDLKKIAL ARNAEYNP RF+AV MRI++PKTTALIF+SGK+V
Sbjct: 43 IVPTLQNIVSTVNLDCRLDLKKIALQARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMV 102
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE +KLAARKYARIVQK+GFP +FKDFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 103 CTGAKSEDHSKLAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 162
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYDQ 180
S+YEPELFPGLIYRMK+P + +LIF+SGK+V+TGAK R++IYAAF N++PVL Y Q
Sbjct: 163 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKYRKEIYAAFENMFPVLTEYRKTQQ 222
>gi|417882|sp|Q02879.1|TBP2_WHEAT RecName: Full=TATA-box-binding protein 2; AltName: Full=TATA
sequence-binding protein 2; Short=TBP-2; AltName:
Full=TATA-binding factor 2; AltName: Full=TATA-box
factor 2; AltName: Full=Transcription initiation factor
TFIID TBP-2 subunit
gi|21877|emb|CAA79268.1| DNA binding protein [Triticum aestivum]
gi|170778|gb|AAA34307.1| DNA-binding protein [Triticum aestivum]
Length = 201
Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 128/178 (71%), Positives = 153/178 (85%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL+CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+VCT
Sbjct: 24 PTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 83
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE Q+KLAARKYARI+QK+GFP +FKDFKIQNIV SCDV+FPI+LE L H FS+
Sbjct: 84 GAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVASCDVKFPIRLEGLAYSHGAFSS 143
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYDQ 180
YEPELFPGLIYRM++P + +LIF+SGK+V+TGAK RE+ Y+AF NIYPVL + Q
Sbjct: 144 YEPELFPGLIYRMRQPKIVLLIFVSGKIVLTGAKVREETYSAFENIYPVLTEFRKVQQ 201
>gi|356571702|ref|XP_003554013.1| PREDICTED: TATA-box-binding protein-like [Glycine max]
Length = 200
Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 127/175 (72%), Positives = 154/175 (88%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL+CKL+LK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 21 IVPTLQNIVSTVNLDCKLELKSIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 80
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q+KLAARKYARI+QK+GFP +FKDFKIQNIVGSCDV+FPI+LE L H+ F
Sbjct: 81 CTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHSAF 140
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRMK+P + +LIF+SGK+V+TGAK R++ Y AF NIYPVL +
Sbjct: 141 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEF 195
>gi|297746507|emb|CBI16563.3| unnamed protein product [Vitis vinifera]
Length = 238
Score = 280 bits (717), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 127/173 (73%), Positives = 152/173 (87%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL+CKLDLK IAL ARNAEYNP RF+AV MRI++PKTTALIF+SGK+VCT
Sbjct: 23 PTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMVCT 82
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE Q+KLAARKYARI+QK+GFP +FKDFKIQNIVGSCDV+FPI+LE L H FS+
Sbjct: 83 GAKSEHQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 142
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRMK+P + +LIF+SGK+V+TGAK R++ Y AF NIYPVL +
Sbjct: 143 YEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEF 195
>gi|351727953|ref|NP_001238202.1| TATA-box-binding protein [Glycine max]
gi|3122946|sp|Q42808.1|TBP_SOYBN RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; Short=TBP; AltName:
Full=TATA-binding factor; AltName: Full=TATA-box factor;
AltName: Full=Transcription initiation factor TFIID TBP
subunit
gi|1220522|gb|AAA91948.1| TATA-box binding protein [Glycine max]
Length = 200
Score = 280 bits (717), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 127/175 (72%), Positives = 153/175 (87%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL+CKLDLK IAL ARNAEYNP RF+AV MRI++PKTTALIF+SGK+V
Sbjct: 21 IVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMV 80
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q+KLAARKYARI+QK+GFP +FKDFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 81 CTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 140
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRMK+P + +LIF+SGK+V+TGAK R++ Y AF NIYPVL +
Sbjct: 141 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEF 195
>gi|326490497|dbj|BAJ84912.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 200
Score = 280 bits (717), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 128/180 (71%), Positives = 153/180 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL+CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 21 IVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 80
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q+KLAARKYARI+QK+GFP +FKDFKIQNIV SCDV+FPI+LE L H F
Sbjct: 81 CTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVASCDVKFPIRLEGLAYSHGAF 140
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYDQ 180
S+YEPELFPGLIYRM++P + +LIF+SGK+V+TGAK RE+ Y AF NIYPVL + Q
Sbjct: 141 SSYEPELFPGLIYRMRQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLTEFRKVQQ 200
>gi|356532171|ref|XP_003534647.1| PREDICTED: TATA-box-binding protein-like [Glycine max]
Length = 200
Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 127/175 (72%), Positives = 153/175 (87%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL+CKL+LK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 21 IVPTLQNIVSTVNLDCKLELKSIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 80
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q+KLAARKYARI+QK+GFP +FKDFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 81 CTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 140
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRMK+P + +LIF+SGK+V+TGAK R++ Y AF NIYPVL +
Sbjct: 141 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEF 195
>gi|307204782|gb|EFN83340.1| TATA-box-binding protein [Harpegnathos saltator]
Length = 304
Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 127/173 (73%), Positives = 153/173 (88%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 129 PQLQNIVSTVNLNCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 188
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE+ ++LAARKYARI+QK+GFP +F DFKIQN+VGSCDV+FPI+LE L H FS+
Sbjct: 189 GAKSEADSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLSHGQFSS 248
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R++IY AF+NIYP+L +
Sbjct: 249 YEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRKEIYEAFDNIYPILKSF 301
>gi|340727525|ref|XP_003402092.1| PREDICTED: TATA-box-binding protein-like [Bombus terrestris]
gi|350422935|ref|XP_003493334.1| PREDICTED: TATA-box-binding protein-like [Bombus impatiens]
Length = 314
Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 127/173 (73%), Positives = 152/173 (87%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 139 PQLQNIVSTVNLNCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 198
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++LAARKYARI+QK+GFP +F DFKIQN+VGSCDV+FPI+LE L H FS+
Sbjct: 199 GAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQFSS 258
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R++IY AF+NIYP+L +
Sbjct: 259 YEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYEAFDNIYPILKSF 311
>gi|302773061|ref|XP_002969948.1| hypothetical protein SELMODRAFT_16705 [Selaginella moellendorffii]
gi|302799318|ref|XP_002981418.1| hypothetical protein SELMODRAFT_37142 [Selaginella moellendorffii]
gi|300150958|gb|EFJ17606.1| hypothetical protein SELMODRAFT_37142 [Selaginella moellendorffii]
gi|300162459|gb|EFJ29072.1| hypothetical protein SELMODRAFT_16705 [Selaginella moellendorffii]
Length = 196
Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 128/172 (74%), Positives = 151/172 (87%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+N++CKL+LK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 17 IVPTLQNIVATVNMDCKLELKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 76
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE +LAARKYARI+QK+GFP QFKDFKIQNIVGSCDV FPI+LE L H F
Sbjct: 77 CTGAKSEQNCRLAARKYARIIQKLGFPSQFKDFKIQNIVGSCDVRFPIRLEGLAFSHGHF 136
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
STYEPE+FPGLIYRMK+P + +LIF+SGK+V+TGAK R++IY AF NIYPVL
Sbjct: 137 STYEPEIFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDEIYEAFENIYPVL 188
>gi|168052908|ref|XP_001778881.1| TATA-box binding protein, component of TFIID and TFIIIB
[Physcomitrella patens subsp. patens]
gi|162669750|gb|EDQ56331.1| TATA-box binding protein, component of TFIID and TFIIIB
[Physcomitrella patens subsp. patens]
Length = 200
Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 128/178 (71%), Positives = 153/178 (85%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+N++C+LDLKKIAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+VCT
Sbjct: 23 PTLQNIVSTVNMDCRLDLKKIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 82
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE Q+KLAARKYARI+QK+GF FKDFKIQNIVGSCDV+FPI+LE L H FS+
Sbjct: 83 GAKSEQQSKLAARKYARIIQKLGFQAHFKDFKIQNIVGSCDVKFPIRLEGLAYAHGHFSS 142
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYDQ 180
YEPELFPGLIYRMK+P + +LIF+SGK+V+TGAK R++IY AF NIYPVL + Q
Sbjct: 143 YEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDEIYEAFENIYPVLTEFRKIQQ 200
>gi|91081661|ref|XP_969326.1| PREDICTED: similar to DNA-binding protein [Tribolium castaneum]
gi|270006234|gb|EFA02682.1| hypothetical protein TcasGA2_TC008403 [Tribolium castaneum]
Length = 311
Score = 280 bits (715), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 127/173 (73%), Positives = 153/173 (88%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 136 PQLQNIVSTVNLSCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 195
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++LAARKYARI+QK+GFP +F DFKIQN+VGSCDV+FPI+LE L H+ FS+
Sbjct: 196 GAKSEDDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHSSFSS 255
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R++IY AF+NIYP+L +
Sbjct: 256 YEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKIRQEIYEAFDNIYPILKSF 308
>gi|225435804|ref|XP_002285755.1| PREDICTED: TATA-box-binding protein-like [Vitis vinifera]
Length = 200
Score = 280 bits (715), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 127/173 (73%), Positives = 152/173 (87%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL+CKLDLK IAL ARNAEYNP RF+AV MRI++PKTTALIF+SGK+VCT
Sbjct: 23 PTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMVCT 82
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE Q+KLAARKYARI+QK+GFP +FKDFKIQNIVGSCDV+FPI+LE L H FS+
Sbjct: 83 GAKSEHQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 142
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRMK+P + +LIF+SGK+V+TGAK R++ Y AF NIYPVL +
Sbjct: 143 YEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEF 195
>gi|297853252|ref|XP_002894507.1| hypothetical protein ARALYDRAFT_474610 [Arabidopsis lyrata subsp.
lyrata]
gi|297340349|gb|EFH70766.1| hypothetical protein ARALYDRAFT_474610 [Arabidopsis lyrata subsp.
lyrata]
Length = 200
Score = 280 bits (715), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 131/180 (72%), Positives = 153/180 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL+CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 21 IVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 80
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE +KLAARKYARIVQK+GFP +FKDFKIQNIVGSCDV+FPI+LE L H+ F
Sbjct: 81 CTGAKSEHLSKLAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHSAF 140
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYDQ 180
S+YEPELFPGLIYRMK P + +LIF+SGK+VITGAK RE+ Y AF NIYPVL + Q
Sbjct: 141 SSYEPELFPGLIYRMKLPKIVLLIFVSGKIVITGAKMREETYTAFENIYPVLTEFRKVQQ 200
>gi|224123800|ref|XP_002319167.1| global transcription factor group [Populus trichocarpa]
gi|222857543|gb|EEE95090.1| global transcription factor group [Populus trichocarpa]
Length = 202
Score = 280 bits (715), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 129/180 (71%), Positives = 154/180 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL+CKL+LK+IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 22 IVPTLQNIVSTVNLDCKLELKQIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 81
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q+KLAARKYARI+QK+GF +FKDFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 82 CTGAKSEQQSKLAARKYARIIQKLGFAAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 141
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYDQ 180
S+YEPELFPGLIYRMK+P + +LIF+SGK+VITGAK RE+ Y AF NIYPVL + Q
Sbjct: 142 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVREETYTAFENIYPVLTEFRKVQQ 201
>gi|383858146|ref|XP_003704563.1| PREDICTED: TATA-box-binding protein-like [Megachile rotundata]
Length = 318
Score = 280 bits (715), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 127/173 (73%), Positives = 152/173 (87%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 143 PQLQNIVSTVNLNCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 202
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++LAARKYARI+QK+GFP +F DFKIQN+VGSCDV+FPI+LE L H FS+
Sbjct: 203 GAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQFSS 262
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R++IY AF+NIYP+L +
Sbjct: 263 YEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYEAFDNIYPILKSF 315
>gi|147902539|ref|NP_001080921.1| TATA box-binding protein-like protein 2 [Xenopus laevis]
gi|75570954|sp|Q5UE94.1|TBPL2_XENLA RecName: Full=TATA box-binding protein-like protein 2;
Short=TBP-like protein 2; AltName: Full=TATA box-binding
protein-related factor 3; Short=TBP-related factor 3
gi|54402365|gb|AAV34742.1| TATA-binding protein 2 [Xenopus laevis]
Length = 320
Score = 280 bits (715), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 128/172 (74%), Positives = 150/172 (87%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 142 IVPQLQNIVSTVNLACKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 201
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV FPI+LE L H F
Sbjct: 202 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQF 261
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L
Sbjct: 262 SSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPIL 313
>gi|15222732|ref|NP_175948.1| TATA-box-binding protein 2 [Arabidopsis thaliana]
gi|30695955|ref|NP_849812.1| TATA-box-binding protein 2 [Arabidopsis thaliana]
gi|135627|sp|P28148.1|TBP2_ARATH RecName: Full=TATA-box-binding protein 2; AltName: Full=TATA
sequence-binding protein 2; Short=TBP-2; AltName:
Full=TATA-binding factor 2; AltName: Full=TATA-box
factor 2; AltName: Full=Transcription initiation factor
TFIID TBP-2 subunit
gi|16546|emb|CAA38742.1| transcription initiation factor II [Arabidopsis thaliana]
gi|4204264|gb|AAD10645.1| transcription initiation factor II [Arabidopsis thaliana]
gi|30102756|gb|AAP21296.1| At1g55520 [Arabidopsis thaliana]
gi|39545930|gb|AAR28028.1| TBP2 [Arabidopsis thaliana]
gi|110743161|dbj|BAE99472.1| transcription initiation factor TFIID-2 [Arabidopsis thaliana]
gi|225898024|dbj|BAH30344.1| hypothetical protein [Arabidopsis thaliana]
gi|332195136|gb|AEE33257.1| TATA-box-binding protein 2 [Arabidopsis thaliana]
gi|332195137|gb|AEE33258.1| TATA-box-binding protein 2 [Arabidopsis thaliana]
gi|227073|prf||1613452A transcription initiation factor TFIID-1
Length = 200
Score = 280 bits (715), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 131/180 (72%), Positives = 153/180 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL+CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 21 IVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 80
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE +KLAARKYARIVQK+GFP +FKDFKIQNIVGSCDV+FPI+LE L H+ F
Sbjct: 81 CTGAKSEHLSKLAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHSAF 140
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYDQ 180
S+YEPELFPGLIYRMK P + +LIF+SGK+VITGAK RE+ Y AF NIYPVL + Q
Sbjct: 141 SSYEPELFPGLIYRMKLPKIVLLIFVSGKIVITGAKMREETYTAFENIYPVLREFRKVQQ 200
>gi|224145959|ref|XP_002325828.1| global transcription factor group [Populus trichocarpa]
gi|222862703|gb|EEF00210.1| global transcription factor group [Populus trichocarpa]
Length = 201
Score = 280 bits (715), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 127/180 (70%), Positives = 155/180 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P++QNIV+T+NL+C+LDLK+IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 22 IVPILQNIVSTVNLDCRLDLKQIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 81
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q+KLAARKYARI+QK+GF +FKDFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 82 CTGAKSEQQSKLAARKYARIIQKLGFAAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 141
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYDQ 180
S+YEPE+FPGLIYRMK+P + +LIF+SGK+VITGAK R++ Y AF NIYPVL + Q
Sbjct: 142 SSYEPEIFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFRKVQQ 201
>gi|62859883|ref|NP_001017309.1| TATA box-binding protein-like protein 2 [Xenopus (Silurana)
tropicalis]
gi|123915918|sp|Q28DH2.1|TBPL2_XENTR RecName: Full=TATA box-binding protein-like protein 2;
Short=TBP-like protein 2; Short=xTBPL2; AltName:
Full=TATA box-binding protein-related factor 3;
Short=TBP-related factor 3
gi|89274001|emb|CAJ81377.1| Novel protein similar to TBP [Xenopus (Silurana) tropicalis]
Length = 322
Score = 280 bits (715), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 128/172 (74%), Positives = 150/172 (87%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 144 IVPQLQNIVSTVNLACKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 203
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV FPI+LE L H F
Sbjct: 204 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQF 263
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L
Sbjct: 264 SSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPIL 315
>gi|380027888|ref|XP_003697647.1| PREDICTED: TATA-box-binding protein-like [Apis florea]
Length = 319
Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 127/173 (73%), Positives = 152/173 (87%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 144 PQLQNIVSTVNLNCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 203
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++LAARKYARI+QK+GFP +F DFKIQN+VGSCDV+FPI+LE L H FS+
Sbjct: 204 GAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQFSS 263
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R++IY AF+NIYP+L +
Sbjct: 264 YEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYEAFDNIYPILKSF 316
>gi|66536790|ref|XP_623088.1| PREDICTED: TATA-box-binding protein-like isoform 1 [Apis mellifera]
Length = 319
Score = 279 bits (714), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 127/173 (73%), Positives = 152/173 (87%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 144 PQLQNIVSTVNLNCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 203
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++LAARKYARI+QK+GFP +F DFKIQN+VGSCDV+FPI+LE L H FS+
Sbjct: 204 GAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQFSS 263
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R++IY AF+NIYP+L +
Sbjct: 264 YEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYEAFDNIYPILKSF 316
>gi|269980507|gb|ACZ56425.1| TATA-binding protein [Litopenaeus vannamei]
Length = 300
Score = 279 bits (714), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 128/173 (73%), Positives = 152/173 (87%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKL+LKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 125 PQLQNIVSTVNLSCKLELKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 184
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++LAARKYARIVQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H+ FS+
Sbjct: 185 GAKSEQDSRLAARKYARIVQKLGFPAKFMDFKIQNMVGSCDVKFPIRLEGLVLTHSQFSS 244
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R QIY AF+NIYP+L +
Sbjct: 245 YEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRNQIYEAFDNIYPILKSF 297
>gi|37726742|gb|AAO34521.1| TATA-binding protein [Eptatretus stoutii]
Length = 324
Score = 279 bits (714), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 128/175 (73%), Positives = 153/175 (87%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 146 IVPQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 205
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 206 CTGAKSEDQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 265
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF+NIYP+L +
Sbjct: 266 SSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRTEIYEAFDNIYPILKGF 320
>gi|37726730|gb|AAO34516.1| TATA-binding protein isoform 1 [Branchiostoma floridae]
gi|37726734|gb|AAO34519.1| TATA-binding protein isoform 3 [Branchiostoma floridae]
Length = 331
Score = 279 bits (714), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 128/175 (73%), Positives = 153/175 (87%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLKKIALHARNAEYNP RF+AV MRI++P+TTALIFSSGK+V
Sbjct: 153 IVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIRDPRTTALIFSSGKMV 212
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L HA F
Sbjct: 213 CTGAKSEDQSRLAARKYARVVQKLGFPCKFLDFKIQNMVGSCDVKFPIRLEGLVLTHAQF 272
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK RE+IY AF IYP+L +
Sbjct: 273 SSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVREEIYEAFETIYPILKGF 327
>gi|37726732|gb|AAO34517.1| TATA-binding protein isoform 2 [Branchiostoma floridae]
Length = 329
Score = 279 bits (714), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 128/175 (73%), Positives = 153/175 (87%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLKKIALHARNAEYNP RF+AV MRI++P+TTALIFSSGK+V
Sbjct: 151 IVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIRDPRTTALIFSSGKMV 210
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L HA F
Sbjct: 211 CTGAKSEDQSRLAARKYARVVQKLGFPCKFLDFKIQNMVGSCDVKFPIRLEGLVLTHAQF 270
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK RE+IY AF IYP+L +
Sbjct: 271 SSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVREEIYEAFETIYPILKGF 325
>gi|217075508|gb|ACJ86114.1| unknown [Medicago truncatula]
Length = 200
Score = 279 bits (714), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 127/175 (72%), Positives = 153/175 (87%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL+CKL+LK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 21 IVPTLQNIVSTVNLDCKLELKSIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 80
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q+KLAARKYARI+QK+GFP +FKDFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 81 CTGAKSEVQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 140
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRMK+P + +LIF+SGK+V+TGAK R++ Y AF NIYPVL +
Sbjct: 141 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEF 195
>gi|363814312|ref|NP_001242795.1| uncharacterized protein LOC100810213 [Glycine max]
gi|255644444|gb|ACU22726.1| unknown [Glycine max]
Length = 200
Score = 279 bits (713), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 127/175 (72%), Positives = 153/175 (87%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL+CKLDLK IAL ARNAEYNP RF+AV MRI++PKTTALIF+SGK+V
Sbjct: 21 IVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMV 80
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q+KLAARKYARI+QK+GFP +FKDFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 81 CTGAKSEQQSKLAARKYARIIQKLGFPPKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 140
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRMK+P + +LIF+SGK+V+TGAK R++ Y AF NIYPVL +
Sbjct: 141 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEF 195
>gi|444728605|gb|ELW69055.1| TATA box-binding protein-like protein 2 [Tupaia chinensis]
Length = 378
Score = 279 bits (713), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 128/175 (73%), Positives = 152/175 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLKKIALHA+NAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 201 IVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 260
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV FPI+LE L H F
Sbjct: 261 CTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQF 320
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L V+
Sbjct: 321 SSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPILKVF 375
>gi|18481630|gb|AAL73490.1|AF464907_1 TATA-binding protein TBP2 [Oryza sativa]
Length = 203
Score = 279 bits (713), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 128/178 (71%), Positives = 152/178 (85%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL+CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+VCT
Sbjct: 26 PTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 85
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE Q+KLAARKYARI+QK+GFP +FKDFKI NIVGSCDV+FPI+LE L H FS+
Sbjct: 86 GAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIXNIVGSCDVKFPIRLEGLAYSHGAFSS 145
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYDQ 180
YEPELFPGLIYRMK+P + +LIF+SGK+V+TGAK R++ Y AF NIYPVL + Q
Sbjct: 146 YEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKVQQ 203
>gi|48374976|gb|AAT42173.1| TATA sequence-binding protein 2 (TBP-2) [Zea mays]
gi|413933541|gb|AFW68092.1| TATA-binding protein2 [Zea mays]
Length = 392
Score = 279 bits (713), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 128/175 (73%), Positives = 152/175 (86%)
Query: 6 QNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAK 65
+NIV+T+NL+CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+VCTGAK
Sbjct: 173 RNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAK 232
Query: 66 SESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEP 125
SE Q+KLAARKYARI+QK+GFP +FKDFKIQNIVGSCDV+FPI+LE L H FS+YEP
Sbjct: 233 SEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEP 292
Query: 126 ELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYDQ 180
ELFPGLIYRMK+P + +LIF+SGK+V+TGAK RE+ Y AF NIYPVL+ + Q
Sbjct: 293 ELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLSEFRKIQQ 347
>gi|322801294|gb|EFZ21981.1| hypothetical protein SINV_10030 [Solenopsis invicta]
Length = 306
Score = 279 bits (713), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 127/173 (73%), Positives = 151/173 (87%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 131 PQLQNIVSTVNLSCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 190
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++LAARKYARI+QK+GFP +F DFKIQN+VGSCDV+FPI+LE L H FS+
Sbjct: 191 GAKSEGDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLSHGQFSS 250
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF+NIYP+L +
Sbjct: 251 YEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRTEIYEAFDNIYPILKSF 303
>gi|217075458|gb|ACJ86089.1| unknown [Medicago truncatula]
gi|388502544|gb|AFK39338.1| unknown [Medicago truncatula]
gi|388506912|gb|AFK41522.1| unknown [Medicago truncatula]
Length = 200
Score = 279 bits (713), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 153/175 (87%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL+CKL+LK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 21 IVPTLQNIVSTVNLDCKLELKSIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 80
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q+KLAARKYARI+QK+GFP +FKDFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 81 CTGAKSEVQSKLAARKYARIIQKLGFPAKFKDFKIQNVVGSCDVKFPIRLEGLAYSHGTF 140
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRMK+P + +LIF+SGK+V+TGAK R++ Y AF NIYPVL +
Sbjct: 141 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEF 195
>gi|112983068|ref|NP_001037059.1| TATA-box-binding protein [Bombyx mori]
gi|14423945|sp|O45211.1|TBP_BOMMO RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; AltName: Full=TATA-binding
factor; AltName: Full=TATA-box factor; AltName:
Full=Transcription initiation factor TFIID TBP subunit
gi|3326928|emb|CAA11000.1| TBP [Bombyx mori]
Length = 307
Score = 278 bits (712), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 127/173 (73%), Positives = 152/173 (87%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL+CKLDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 132 PQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 191
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++LAARKYARI+QK+GF +F DFKIQN+VGSCDV+FPI+LE L H FS+
Sbjct: 192 GAKSEEDSRLAARKYARIIQKLGFTAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQFSS 251
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK RE+IY AF+NIYP+L +
Sbjct: 252 YEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVREEIYEAFDNIYPILKSF 304
>gi|332021125|gb|EGI61512.1| TATA-box-binding protein [Acromyrmex echinatior]
Length = 305
Score = 278 bits (712), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 127/173 (73%), Positives = 152/173 (87%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 130 PQLQNIVSTVNLNCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 189
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++LAARKYARI+QK+GFP +F DFKIQN+VGSCDV+FPI+LE L H FS+
Sbjct: 190 GAKSEGDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLSHGQFSS 249
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R++IY AF+NIYP+L +
Sbjct: 250 YEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKIRKEIYEAFDNIYPILKSF 302
>gi|225719098|gb|ACO15395.1| TATA-box-binding protein [Caligus clemensi]
Length = 323
Score = 278 bits (712), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 127/172 (73%), Positives = 154/172 (89%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T++L CKLDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 146 IVPQLQNIVSTVSLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 205
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE ++LAARKYARIVQK+GFP +FKDFKIQN+VGSCDV+FPI+LE L H+ F
Sbjct: 206 CTGAKSEEDSRLAARKYARIVQKLGFPARFKDFKIQNMVGSCDVKFPIRLEGLVLTHSQF 265
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM +P + +LIF+SGKVV+TGAK R++IY AF+NIYP+L
Sbjct: 266 SSYEPELFPGLIYRMVRPRIVLLIFVSGKVVLTGAKVRQEIYEAFDNIYPIL 317
>gi|115489282|ref|NP_001067128.1| Os12g0580300 [Oryza sativa Japonica Group]
gi|77556288|gb|ABA99084.1| TATA-binding protein 2, putative, expressed [Oryza sativa Japonica
Group]
gi|113649635|dbj|BAF30147.1| Os12g0580300 [Oryza sativa Japonica Group]
gi|215736829|dbj|BAG95758.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 208
Score = 278 bits (712), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 128/178 (71%), Positives = 152/178 (85%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL+CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+VCT
Sbjct: 31 PTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 90
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE Q+KLAARKYARI+QK+GF +FKDFKIQNIVGSCDV+FPI+LE L H FS+
Sbjct: 91 GAKSEQQSKLAARKYARIIQKLGFAAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 150
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYDQ 180
YEPELFPGLIYRMK+P + +LIF+SGK+V+TGAK R++ Y AF NIYPVL + Q
Sbjct: 151 YEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKVQQ 208
>gi|307182447|gb|EFN69682.1| TATA-box-binding protein [Camponotus floridanus]
Length = 305
Score = 278 bits (712), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 127/173 (73%), Positives = 152/173 (87%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 130 PQLQNIVSTVNLNCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 189
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++LAARKYARI+QK+GFP +F DFKIQN+VGSCDV+FPI+LE L H FS+
Sbjct: 190 GAKSEGDSRLAARKYARIIQKLGFPAKFIDFKIQNMVGSCDVKFPIRLEGLVLSHGQFSS 249
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R++IY AF+NIYP+L +
Sbjct: 250 YEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKIRKEIYEAFDNIYPILKSF 302
>gi|48374984|gb|AAT42180.1| TATA sequence-binding protein 1 (TBP-1) [Zea mays]
gi|414872054|tpg|DAA50611.1| TPA: TATA sequence-binding protein 1 [Zea mays]
Length = 287
Score = 278 bits (712), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 127/168 (75%), Positives = 150/168 (89%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
++NIV+T+NL+CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+VCTGA
Sbjct: 102 VRNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGA 161
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYE 124
KSE Q+KLAARKYARI+QK+GFP +FKDFKIQNIVGSCDV+FPI+LE L H FS+YE
Sbjct: 162 KSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYE 221
Query: 125 PELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
PELFPGLIYRMK+P + +LIF+SGK+V+TGAK RE+ Y AF NIYPVL
Sbjct: 222 PELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVL 269
>gi|356568214|ref|XP_003552308.1| PREDICTED: TATA-box-binding protein-like [Glycine max]
Length = 200
Score = 278 bits (711), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 153/175 (87%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T++L+CKL+LK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 21 IVPTLQNIVSTVSLDCKLELKSIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 80
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q+KLAARKYARI+QK+GFP +FKDFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 81 CTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 140
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRMK+P + +LIF+SGK+V+TGAK R++ Y AF NIYPVL +
Sbjct: 141 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEF 195
>gi|346470907|gb|AEO35298.1| hypothetical protein [Amblyomma maculatum]
Length = 309
Score = 278 bits (711), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 127/173 (73%), Positives = 151/173 (87%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 134 PQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 193
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE Q++LAARKYARI+QK+GF +F DFKIQN+VGSCDV FPI+LE L H+ FS+
Sbjct: 194 GAKSEEQSRLAARKYARIIQKLGFDAKFLDFKIQNMVGSCDVRFPIRLEGLVLTHSQFSS 253
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF+NIYP+L +
Sbjct: 254 YEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRSEIYEAFDNIYPILKGF 306
>gi|427788157|gb|JAA59530.1| Putative tata-box-binding protein [Rhipicephalus pulchellus]
Length = 308
Score = 278 bits (711), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 127/173 (73%), Positives = 151/173 (87%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 133 PQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 192
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE Q++LAARKYARI+QK+GF +F DFKIQN+VGSCDV FPI+LE L H+ FS+
Sbjct: 193 GAKSEEQSRLAARKYARIIQKLGFDAKFLDFKIQNMVGSCDVRFPIRLEGLVLTHSQFSS 252
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF+NIYP+L +
Sbjct: 253 YEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRSEIYEAFDNIYPILKGF 305
>gi|242034379|ref|XP_002464584.1| hypothetical protein SORBIDRAFT_01g021297 [Sorghum bicolor]
gi|241918438|gb|EER91582.1| hypothetical protein SORBIDRAFT_01g021297 [Sorghum bicolor]
Length = 218
Score = 278 bits (711), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 127/175 (72%), Positives = 151/175 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL+C+LDLK IAL ARNAEYNP RF+AV MRI+EPKTTAL+F+SGK+V
Sbjct: 39 IVPALQNIVSTVNLDCQLDLKMIALQARNAEYNPKRFAAVIMRIREPKTTALVFASGKMV 98
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE +KLAARKYARIVQK+G+P +FKDFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 99 CTGAKSEEHSKLAARKYARIVQKLGYPAKFKDFKIQNMVGSCDVKFPIRLEGLAFSHGAF 158
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S YEPELFPGLIYRMK P + +LIF+SGK+V+TGAK RE+IY AF NIYPVL Y
Sbjct: 159 SNYEPELFPGLIYRMKNPKIVLLIFVSGKIVLTGAKVREEIYTAFENIYPVLTEY 213
>gi|15231241|ref|NP_187953.1| TATA-box-binding protein 1 [Arabidopsis thaliana]
gi|135626|sp|P28147.1|TBP1_ARATH RecName: Full=TATA-box-binding protein 1; AltName: Full=TATA
sequence-binding protein 1; Short=TBP-1; AltName:
Full=TATA-binding factor 1; AltName: Full=TATA-box
factor 1; AltName: Full=Transcription initiation factor
TFIID TBP-1 subunit
gi|1943466|pdb|1VOK|A Chain A, Arabidopsis Thaliana Tbp (Dimer)
gi|1943467|pdb|1VOK|B Chain B, Arabidopsis Thaliana Tbp (Dimer)
gi|1943469|pdb|1VOL|B Chain B, Tfiib (Human Core Domain)TBP (A.THALIANA)TATA ELEMENT
Ternary Complex
gi|7245860|pdb|1QN5|A Chain A, Crystal Structure Of The G(-26) Adenovirus Major Late
Promoter Tata Box Variant Bound To Wild-Type Tbp
(Arabidopsis Thaliana Tbp Isoform 2). Tata Element
Recognition By The Tata Box-Binding Protein Has Been
Conserved Throughout Evolution.
gi|7245861|pdb|1QN5|B Chain B, Crystal Structure Of The G(-26) Adenovirus Major Late
Promoter Tata Box Variant Bound To Wild-Type Tbp
(Arabidopsis Thaliana Tbp Isoform 2). Tata Element
Recognition By The Tata Box-Binding Protein Has Been
Conserved Throughout Evolution.
gi|7245866|pdb|1QN6|A Chain A, Crystal Structure Of The T(-26) Adenovirus Major Late
Promoter Tata Box Variant Bound To Wild-Type Tbp
(Arabidopsis Thaliana Tbp Isoform 2). Tata Element
Recognition By The Tata Box-Binding Protein Has Been
Conserved Throughout Evolution.
gi|7245867|pdb|1QN6|B Chain B, Crystal Structure Of The T(-26) Adenovirus Major Late
Promoter Tata Box Variant Bound To Wild-Type Tbp
(Arabidopsis Thaliana Tbp Isoform 2). Tata Element
Recognition By The Tata Box-Binding Protein Has Been
Conserved Throughout Evolution.
gi|7245872|pdb|1QN7|A Chain A, Crystal Structure Of The T(-27) Adenovirus Major Late
Promoter Tata Box Variant Bound To Wild-Type Tbp
(Arabidopsis Thaliana Tbp Isoform 2). Tata Element
Recognition By The Tata Box-Binding Protein Has Been
Conserved Throughout Evolution.
gi|7245873|pdb|1QN7|B Chain B, Crystal Structure Of The T(-27) Adenovirus Major Late
Promoter Tata Box Variant Bound To Wild-Type Tbp
(Arabidopsis Thaliana Tbp Isoform 2). Tata Element
Recognition By The Tata Box-Binding Protein Has Been
Conserved Throughout Evolution.
gi|7245878|pdb|1QN8|A Chain A, Crystal Structure Of The T(-28) Adenovirus Major Late
Promoter Tata Box Variant Bound To Wild-Type Tbp
(Arabidopsis Thaliana Tbp Isoform 2). Tata Element
Recognition By The Tata Box-Binding Protein Has Been
Conserved Throughout Evolution.
gi|7245879|pdb|1QN8|B Chain B, Crystal Structure Of The T(-28) Adenovirus Major Late
Promoter Tata Box Variant Bound To Wild-Type Tbp
(Arabidopsis Thaliana Tbp Isoform 2). Tata Element
Recognition By The Tata Box-Binding Protein Has Been
Conserved Throughout Evolution.
gi|7245884|pdb|1QN9|A Chain A, Crystal Structure Of The C(-29) Adenovirus Major Late
Promoter Tata Box Variant Bound To Wild-Type Tbp
(Arabidopsis Thaliana Tbp Isoform 2). Tata Element
Recognition By The Tata Box-Binding Protein Has Been
Conserved Throughout Evolution.
gi|7245885|pdb|1QN9|B Chain B, Crystal Structure Of The C(-29) Adenovirus Major Late
Promoter Tata Box Variant Bound To Wild-Type Tbp
(Arabidopsis Thaliana Tbp Isoform 2). Tata Element
Recognition By The Tata Box-Binding Protein Has Been
Conserved Throughout Evolution.
gi|7245890|pdb|1QNA|A Chain A, Crystal Structure Of The T(-30) Adenovirus Major Late
Promoter Tata Box Variant Bound To Wild-Type Tbp
(Arabidopsis Thaliana Tbp Isoform 2). Tata Element
Recognition By The Tata Box-Binding Protein Has Been
Conserved Throughout Evolution.
gi|7245891|pdb|1QNA|B Chain B, Crystal Structure Of The T(-30) Adenovirus Major Late
Promoter Tata Box Variant Bound To Wild-Type Tbp
(Arabidopsis Thaliana Tbp Isoform 2). Tata Element
Recognition By The Tata Box-Binding Protein Has Been
Conserved Throughout Evolution.
gi|7245896|pdb|1QNB|A Chain A, Crystal Structure Of The T(-25) Adenovirus Major Late
Promoter Tata Box Variant Bound To Wild-Type Tbp
(Arabidopsis Thaliana Tbp Isoform 2). Tata Element
Recognition By The Tata Box-Binding Protein Has Been
Conserved Throughout Evolution.
gi|7245897|pdb|1QNB|B Chain B, Crystal Structure Of The T(-25) Adenovirus Major Late
Promoter Tata Box Variant Bound To Wild-Type Tbp
(Arabidopsis Thaliana Tbp Isoform 2). Tata Element
Recognition By The Tata Box-Binding Protein Has Been
Conserved Throughout Evolution.
gi|7245902|pdb|1QNC|A Chain A, Crystal Structure Of The A(-31) Adenovirus Major Late
Promoter Tata Box Variant Bound To Wild-Type Tbp
(Arabidopsis Thaliana Tbp Isoform 2). Tata Element
Recognition By The Tata Box-Binding Protein Has Been
Conserved Throughout Evolution.
gi|7245903|pdb|1QNC|B Chain B, Crystal Structure Of The A(-31) Adenovirus Major Late
Promoter Tata Box Variant Bound To Wild-Type Tbp
(Arabidopsis Thaliana Tbp Isoform 2). Tata Element
Recognition By The Tata Box-Binding Protein Has Been
Conserved Throughout Evolution.
gi|7245908|pdb|1QNE|A Chain A, Crystal Structure Of The Adenovirus Major Late Promoter
Tata Box Bound To Wild-Type Tbp (Arabidopsis Thaliana
Tbp Isoform 2).
gi|7245909|pdb|1QNE|B Chain B, Crystal Structure Of The Adenovirus Major Late Promoter
Tata Box Bound To Wild-Type Tbp (Arabidopsis Thaliana
Tbp Isoform 2).
gi|7245938|pdb|1QN3|A Chain A, Crystal Structure Of The C(-25) Adenovirus Major Late
Promoter Tata Box Variant Bound To Wild-Type Tbp
(Arabidopsis Thaliana Tbp Isoform 2). Tata Element
Recognition By The Tata Box-Binding Protein Has Been
Conserved Throughout Evolution.
gi|7245939|pdb|1QN3|B Chain B, Crystal Structure Of The C(-25) Adenovirus Major Late
Promoter Tata Box Variant Bound To Wild-Type Tbp
(Arabidopsis Thaliana Tbp Isoform 2). Tata Element
Recognition By The Tata Box-Binding Protein Has Been
Conserved Throughout Evolution.
gi|7246010|pdb|1QN4|A Chain A, Crystal Structure Of The T(-24) Adenovirus Major Late
Promoter Tata Box Variant Bound To Wild-Type Tbp
(Arabidopsis Thaliana Tbp Isoform 2). Tata Element
Recognition By The Tata Box-Binding Protein Has Been
Conserved Throughout Evolution.
gi|7246011|pdb|1QN4|B Chain B, Crystal Structure Of The T(-24) Adenovirus Major Late
Promoter Tata Box Variant Bound To Wild-Type Tbp
(Arabidopsis Thaliana Tbp Isoform 2). Tata Element
Recognition By The Tata Box-Binding Protein Has Been
Conserved Throughout Evolution.
gi|11692888|gb|AAG40047.1|AF324696_1 AT3g13445 [Arabidopsis thaliana]
gi|11935207|gb|AAG42019.1|AF327429_1 putative transcription initiation factor TFIID-1 [Arabidopsis
thaliana]
gi|13194816|gb|AAK15570.1|AF349523_1 putative TATA sequence-binding transcription initiation factor
protein [Arabidopsis thaliana]
gi|16548|emb|CAA38743.1| transcription initiation factor II [Arabidopsis thaliana]
gi|9280296|dbj|BAB01751.1| transcription initiation factor TFIID-1 (TATA-box factor 1) (TATA
sequence-binding protein 1) (TBP-1) [Arabidopsis
thaliana]
gi|15451056|gb|AAK96799.1| transcription initiation factor TFIID-1 (TATA-box factor 1) (TATA
sequence-binding protein 1) (TBP-1) [Arabidopsis
thaliana]
gi|18377408|gb|AAL66870.1| transcription initiation factor TFIID-1 [Arabidopsis thaliana]
gi|21537103|gb|AAM61444.1| transcription initiation factor TFIID-1 (TATA sequence-binding
protein 1) [Arabidopsis thaliana]
gi|39545928|gb|AAR28027.1| TBP1 [Arabidopsis thaliana]
gi|225898637|dbj|BAH30449.1| hypothetical protein [Arabidopsis thaliana]
gi|332641834|gb|AEE75355.1| TATA-box-binding protein 1 [Arabidopsis thaliana]
gi|227074|prf||1613452B transcription initiation factor TFIID-2
Length = 200
Score = 278 bits (711), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 130/180 (72%), Positives = 154/180 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL+CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 21 IVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 80
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE +K+AARKYARIVQK+GFP +FKDFKIQNIVGSCDV+FPI+LE L HA F
Sbjct: 81 CTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHAAF 140
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYDQ 180
S+YEPELFPGLIYRMK P + +LIF+SGK+VITGAK R++ Y AF NIYPVL+ + Q
Sbjct: 141 SSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMRDETYKAFENIYPVLSEFRKIQQ 200
>gi|37726728|gb|AAO34515.1| TATA-binding protein [Petromyzon marinus]
Length = 292
Score = 278 bits (711), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 128/173 (73%), Positives = 151/173 (87%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 116 PQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 175
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H FS+
Sbjct: 176 GAKSEDQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSS 235
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 236 YEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRGEIYEAFENIYPILKGF 288
>gi|39725630|tpg|DAA02137.1| TPA_exp: TBP-related factor 3 [Xenopus laevis]
Length = 320
Score = 278 bits (711), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 127/172 (73%), Positives = 150/172 (87%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 142 IVPQLQNIVSTVNLACKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 201
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV FPI+LE L H F
Sbjct: 202 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQF 261
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
++YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L
Sbjct: 262 NSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPIL 313
>gi|339961157|pdb|1VTL|E Chain E, Co-Crystal Structure Of Tbp Recognizing The Minor Groove
Of A Tata Element
gi|339961158|pdb|1VTL|F Chain F, Co-Crystal Structure Of Tbp Recognizing The Minor Groove
Of A Tata Element
Length = 186
Score = 278 bits (710), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 129/175 (73%), Positives = 153/175 (87%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL+CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 9 IVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 68
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE +K+AARKYARIVQK+GFP +FKDFKIQNIVGSCDV+FPI+LE L HA F
Sbjct: 69 CTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHAAF 128
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRMK P + +LIF+SGK+VITGAK R++ Y AF NIYPVL+ +
Sbjct: 129 SSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMRDETYKAFENIYPVLSEF 183
>gi|339961162|pdb|1VTO|A Chain A, 1.9 A Resolution Refined Structure Of Tbp Recognizing The
Minor Groove Of Tataaaag
gi|339961163|pdb|1VTO|B Chain B, 1.9 A Resolution Refined Structure Of Tbp Recognizing The
Minor Groove Of Tataaaag
Length = 190
Score = 278 bits (710), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 130/180 (72%), Positives = 154/180 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL+CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 11 IVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 70
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE +K+AARKYARIVQK+GFP +FKDFKIQNIVGSCDV+FPI+LE L HA F
Sbjct: 71 CTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHAAF 130
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYDQ 180
S+YEPELFPGLIYRMK P + +LIF+SGK+VITGAK R++ Y AF NIYPVL+ + Q
Sbjct: 131 SSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMRDETYKAFENIYPVLSEFRKIQQ 190
>gi|222617361|gb|EEE53493.1| hypothetical protein OsJ_36653 [Oryza sativa Japonica Group]
Length = 225
Score = 278 bits (710), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 128/178 (71%), Positives = 152/178 (85%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL+CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+VCT
Sbjct: 31 PTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 90
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE Q+KLAARKYARI+QK+GF +FKDFKIQNIVGSCDV+FPI+LE L H FS+
Sbjct: 91 GAKSEQQSKLAARKYARIIQKLGFAAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 150
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYDQ 180
YEPELFPGLIYRMK+P + +LIF+SGK+V+TGAK R++ Y AF NIYPVL + Q
Sbjct: 151 YEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKVQQ 208
>gi|332237163|ref|XP_003267773.1| PREDICTED: LOW QUALITY PROTEIN: TATA box-binding protein-like
protein 2 [Nomascus leucogenys]
Length = 379
Score = 278 bits (710), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 127/172 (73%), Positives = 150/172 (87%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLKKIALHA+NAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 202 IVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 261
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV FPI+LE L H F
Sbjct: 262 CTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQF 321
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L
Sbjct: 322 SSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPIL 373
>gi|1729912|sp|P53361.1|TBP_SPOFR RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; Short=TBP; AltName:
Full=TATA-binding factor; AltName: Full=TATA-box factor;
AltName: Full=Transcription initiation factor TFIID TBP
subunit
gi|349117|gb|AAA62394.1| DNA-binding protein [Spodoptera frugiperda]
Length = 307
Score = 278 bits (710), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 127/173 (73%), Positives = 151/173 (87%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 132 PQLQNIVSTVNLNCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 191
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++LAARKYARI+QK+GF +F DFKIQN+VGSCDV+FPI+LE L H FS+
Sbjct: 192 GAKSEEDSRLAARKYARIIQKLGFTAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQFSS 251
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK RE+IY AF+NIYP+L +
Sbjct: 252 YEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVREEIYEAFDNIYPILKSF 304
>gi|39930602|ref|NP_950248.1| TATA box-binding protein-like protein 2 [Homo sapiens]
gi|74749326|sp|Q6SJ96.1|TBPL2_HUMAN RecName: Full=TATA box-binding protein-like protein 2;
Short=TBP-like protein 2; AltName: Full=TATA box-binding
protein-related factor 3; Short=TBP-related factor 3
gi|38569209|gb|AAR24281.1| TBP-related factor 3 [Homo sapiens]
gi|90296776|gb|ABD93323.1| TATA box binding protein like 2 [Homo sapiens]
Length = 375
Score = 277 bits (709), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 127/172 (73%), Positives = 150/172 (87%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLKKIALHA+NAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 198 IVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 257
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV FPI+LE L H F
Sbjct: 258 CTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQF 317
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L
Sbjct: 318 SSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPIL 369
>gi|109658498|gb|AAI17186.1| TATA box binding protein like 2 [Homo sapiens]
gi|109658806|gb|AAI17160.1| TATA box binding protein like 2 [Homo sapiens]
gi|313883330|gb|ADR83151.1| TATA box binding protein like 2 [synthetic construct]
Length = 375
Score = 277 bits (709), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 127/172 (73%), Positives = 150/172 (87%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLKKIALHA+NAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 198 IVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 257
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV FPI+LE L H F
Sbjct: 258 CTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQF 317
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L
Sbjct: 318 SSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPIL 369
>gi|17298078|dbj|BAB78513.1| TATA-box binding protein [Lethenteron reissneri]
Length = 301
Score = 277 bits (709), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 128/173 (73%), Positives = 151/173 (87%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 125 PQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 184
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H FS+
Sbjct: 185 GAKSEDQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSS 244
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 245 YEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRGEIYEAFENIYPILKGF 297
>gi|388512865|gb|AFK44494.1| unknown [Lotus japonicus]
Length = 200
Score = 277 bits (709), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 126/180 (70%), Positives = 154/180 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL+CKL+LK IAL ARNAE+NP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 21 IVPTLQNIVSTVNLDCKLELKSIALQARNAEFNPKRFAAVIMRIREPKTTALIFASGKMV 80
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYARI+QK+GFP +FKDFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 81 CTGAKSEEQSRLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 140
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYDQ 180
S+YEPELFPGLIYRMK+P + +LIF+SGK+V+TGAK R++ Y AF NIYPVL + Q
Sbjct: 141 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQQ 200
>gi|397523415|ref|XP_003831727.1| PREDICTED: TATA box-binding protein-like protein 2 [Pan paniscus]
gi|410048302|ref|XP_003952543.1| PREDICTED: TATA box binding protein like 2 [Pan troglodytes]
Length = 375
Score = 277 bits (709), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 127/172 (73%), Positives = 150/172 (87%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLKKIALHA+NAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 198 IVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 257
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV FPI+LE L H F
Sbjct: 258 CTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQF 317
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L
Sbjct: 318 SSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPIL 369
>gi|344273811|ref|XP_003408712.1| PREDICTED: TATA box-binding protein-like protein 2-like [Loxodonta
africana]
Length = 344
Score = 277 bits (709), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 127/172 (73%), Positives = 150/172 (87%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLKKIALHA+NAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 167 IVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 226
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV FPI+LE L H F
Sbjct: 227 CTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQF 286
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L
Sbjct: 287 SSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPIL 338
>gi|218187146|gb|EEC69573.1| hypothetical protein OsI_38882 [Oryza sativa Indica Group]
Length = 221
Score = 277 bits (709), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 128/178 (71%), Positives = 152/178 (85%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL+CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+VCT
Sbjct: 27 PTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 86
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE Q+KLAARKYARI+QK+GF +FKDFKIQNIVGSCDV+FPI+LE L H FS+
Sbjct: 87 GAKSEQQSKLAARKYARIIQKLGFAAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 146
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYDQ 180
YEPELFPGLIYRMK+P + +LIF+SGK+V+TGAK R++ Y AF NIYPVL + Q
Sbjct: 147 YEPELFPGLIYRMKQPKIVLLIFVSGKLVLTGAKVRDETYTAFENIYPVLTEFRKVQQ 204
>gi|355693296|gb|EHH27899.1| hypothetical protein EGK_18211 [Macaca mulatta]
Length = 376
Score = 277 bits (709), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 127/172 (73%), Positives = 150/172 (87%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLKKIALHA+NAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 199 IVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 258
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV FPI+LE L H F
Sbjct: 259 CTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQF 318
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L
Sbjct: 319 SSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPIL 370
>gi|119601081|gb|EAW80675.1| TATA box binding protein like 2, isoform CRA_a [Homo sapiens]
Length = 307
Score = 277 bits (708), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 127/172 (73%), Positives = 150/172 (87%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLKKIALHA+NAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 130 IVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 189
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV FPI+LE L H F
Sbjct: 190 CTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQF 249
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L
Sbjct: 250 SSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPIL 301
>gi|157265561|ref|NP_001098076.1| TATA box-binding protein-like protein 2 [Pan troglodytes]
gi|166987366|sp|A6H907.1|TBPL2_PANTR RecName: Full=TATA box-binding protein-like protein 2;
Short=TBP-like protein 2; AltName: Full=TATA box-binding
protein-related factor 3; Short=TBP-related factor 3
gi|148910843|tpg|DAA06032.1| TPA_inf: TATA box binding protein-like 2 [Pan troglodytes]
Length = 376
Score = 277 bits (708), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 127/172 (73%), Positives = 151/172 (87%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLKKIALHA+NAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 198 IVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 257
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 258 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 317
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L
Sbjct: 318 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPIL 369
>gi|321473578|gb|EFX84545.1| hypothetical protein DAPPUDRAFT_194512 [Daphnia pulex]
Length = 312
Score = 277 bits (708), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 127/175 (72%), Positives = 153/175 (87%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 135 IVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 194
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE ++LAARKYARIVQK+ FP +F DFKIQN+VGSCDV+FPI+LE L H+ F
Sbjct: 195 CTGAKSEEDSRLAARKYARIVQKLNFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHSQF 254
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R++IY AF+NIYP+L +
Sbjct: 255 SSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYDAFDNIYPILKSF 309
>gi|156392660|ref|XP_001636166.1| predicted protein [Nematostella vectensis]
gi|156223266|gb|EDO44103.1| predicted protein [Nematostella vectensis]
Length = 194
Score = 277 bits (708), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 127/173 (73%), Positives = 152/173 (87%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLKKIAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 19 PQLQNIVSTVNLGCKLDLKKIALQARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 78
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE Q+KLAARKYAR+VQK+GFP +F +FKIQN+VGSCDV+FPI+LE L H FS+
Sbjct: 79 GAKSEEQSKLAARKYARVVQKLGFPAKFTEFKIQNMVGSCDVKFPIRLEGLVLAHGQFSS 138
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R++IY AF+NIYP+L +
Sbjct: 139 YEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYEAFDNIYPILKTF 191
>gi|402876253|ref|XP_003901890.1| PREDICTED: TATA box-binding protein-like protein 2 [Papio anubis]
Length = 376
Score = 277 bits (708), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 127/172 (73%), Positives = 150/172 (87%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLKKIALHA+NAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 199 IVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 258
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV FPI+LE L H F
Sbjct: 259 CTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQF 318
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L
Sbjct: 319 SSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPIL 370
>gi|355778612|gb|EHH63648.1| hypothetical protein EGM_16656 [Macaca fascicularis]
Length = 376
Score = 277 bits (708), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 127/172 (73%), Positives = 150/172 (87%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLKKIALHA+NAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 199 IVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 258
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV FPI+LE L H F
Sbjct: 259 CTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQF 318
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L
Sbjct: 319 SSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPIL 370
>gi|109083719|ref|XP_001088740.1| PREDICTED: TATA box-binding protein-like protein 2-like [Macaca
mulatta]
Length = 376
Score = 277 bits (708), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 127/172 (73%), Positives = 150/172 (87%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLKKIALHA+NAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 199 IVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 258
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV FPI+LE L H F
Sbjct: 259 CTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQF 318
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L
Sbjct: 319 SSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPIL 370
>gi|358060360|dbj|GAA93765.1| hypothetical protein E5Q_00411 [Mixia osmundae IAM 14324]
Length = 367
Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 128/175 (73%), Positives = 152/175 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NLECKLDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 190 LVPTLQNIVATVNLECKLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 249
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE ++LA+RKYARI+QK+GF QFK+FKIQNIVGSCDV+FPI+LE L H F
Sbjct: 250 VTGAKSEDDSRLASRKYARIIQKLGFEAQFKEFKIQNIVGSCDVKFPIRLEGLAYSHGHF 309
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP V +LIF+SGK+V+TGAK RE+IY+AF IYPVL+ +
Sbjct: 310 SSYEPELFPGLIYRMVKPKVVLLIFVSGKIVLTGAKVREEIYSAFQLIYPVLSEF 364
>gi|291241110|ref|XP_002740460.1| PREDICTED: TATA box binding protein-like [Saccoglossus kowalevskii]
Length = 293
Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 152/175 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 115 IVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 174
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE ++LAARKYAR++QK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 175 CTGAKSEDFSRLAARKYARVIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQF 234
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R++IY AF NIYP+L +
Sbjct: 235 SSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRKEIYEAFENIYPILKAF 289
>gi|218193429|gb|EEC75856.1| hypothetical protein OsI_12863 [Oryza sativa Indica Group]
Length = 190
Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 127/175 (72%), Positives = 151/175 (86%)
Query: 6 QNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAK 65
+NIV+T+NL+CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+VCTGAK
Sbjct: 12 RNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAK 71
Query: 66 SESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEP 125
SE Q+KLAARKYARI+QK+GFP +FKDFKIQNIVGSCDV+FPI+LE L H FS+YEP
Sbjct: 72 SEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEP 131
Query: 126 ELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYDQ 180
ELFPGLIYRMK+P + +LIF+SGK+V+TGAK R++ Y AF NIYPVL + Q
Sbjct: 132 ELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKVQQ 186
>gi|241566250|ref|XP_002402125.1| TATA-box binding protein (TBP), component of TFII-D and TFIIIB,
putative [Ixodes scapularis]
gi|215499985|gb|EEC09479.1| TATA-box binding protein (TBP), component of TFII-D and TFIIIB,
putative [Ixodes scapularis]
Length = 286
Score = 276 bits (706), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 127/175 (72%), Positives = 152/175 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 109 IVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 168
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYARI+QK+GF +F DFKIQN+VGSCDV FPI+LE L H+ F
Sbjct: 169 CTGAKSEEQSRLAARKYARIIQKLGFDAKFLDFKIQNMVGSCDVRFPIRLEGLVLTHSQF 228
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF+NIYP+L +
Sbjct: 229 SSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRAEIYEAFDNIYPILKGF 283
>gi|328856236|gb|EGG05358.1| hypothetical protein MELLADRAFT_75016 [Melampsora larici-populina
98AG31]
Length = 233
Score = 276 bits (706), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 129/175 (73%), Positives = 152/175 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NLEC+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 56 IVPTLQNIVATVNLECRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 115
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE ++LAARKYARIVQK+GF +F +FKIQNIVGSCDV+FPI+LE L H F
Sbjct: 116 VTGAKSEDDSRLAARKYARIVQKLGFEAKFTEFKIQNIVGSCDVKFPIRLEGLAYNHGHF 175
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP V +LIF+SGK+V+TGAK RE+IY AFNNIYPVL+ +
Sbjct: 176 SSYEPELFPGLIYRMVKPKVVLLIFVSGKIVLTGAKVREEIYQAFNNIYPVLSEF 230
>gi|3122941|sp|P93348.1|TBP_TOBAC RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; Short=TBP; AltName:
Full=TATA-binding factor; AltName: Full=TATA-box factor;
AltName: Full=Transcription initiation factor TFIID TBP
subunit
gi|1498162|dbj|BAA13156.1| TATA binding protein (TBP) [Nicotiana tabacum]
Length = 200
Score = 276 bits (706), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 151/175 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL+CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 21 IVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 80
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE +KLAARKYARI+QK+GF +FKDFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 81 CTGAKSEQSSKLAARKYARIIQKLGFDAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 140
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRMK+P + +LIF+SGK+V+TGAK R++ Y AF NIYPVL +
Sbjct: 141 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEF 195
>gi|357612491|gb|EHJ68026.1| TATA-box-binding protein [Danaus plexippus]
Length = 306
Score = 276 bits (705), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 126/173 (72%), Positives = 151/173 (87%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 131 PQLQNIVSTVNLNCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 190
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++LAARKYARI+QK+GF +F DFKIQN+VGSCDV+FPI+LE L H FS+
Sbjct: 191 GAKSEEDSRLAARKYARIIQKLGFTAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQFSS 250
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R++IY AF+NIYP+L +
Sbjct: 251 YEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYEAFDNIYPILKSF 303
>gi|449667471|ref|XP_002160884.2| PREDICTED: TATA-box-binding protein-like isoform 1 [Hydra
magnipapillata]
Length = 255
Score = 276 bits (705), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 126/170 (74%), Positives = 150/170 (88%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 80 PQLQNIVSTVNLSCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 139
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE Q++LAARKYAR++QK+GFP +F DFKIQNIVGSCDV+FPI+LE L H+ F +
Sbjct: 140 GAKSEEQSRLAARKYARVIQKLGFPAKFVDFKIQNIVGSCDVKFPIRLEGLVLAHSQFCS 199
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF +IYP+L
Sbjct: 200 YEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRSEIYEAFESIYPIL 249
>gi|326921220|ref|XP_003206860.1| PREDICTED: TATA box-binding protein-like protein 2-like [Meleagris
gallopavo]
Length = 328
Score = 276 bits (705), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 127/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 150 IVPQLQNIVSTVNLACKLDLKNIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 209
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV FPI+LE L H F
Sbjct: 210 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQF 269
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 270 SSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPILRGF 324
>gi|315418834|gb|ADU15470.1| TATA box binding protein [Penaeus monodon]
Length = 300
Score = 276 bits (705), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 127/173 (73%), Positives = 151/173 (87%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKL+LKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 125 PQLQNIVSTVNLSCKLELKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 184
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++LAARKYARIVQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H+ FS+
Sbjct: 185 GAKSEQDSRLAARKYARIVQKLGFPAKFMDFKIQNMVGSCDVKFPIRLEGLVLTHSQFSS 244
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+S KVV+TGAK R QIY AF+NIYP+L +
Sbjct: 245 YEPELFPGLIYRMVKPRIVLLIFVSRKVVLTGAKVRNQIYEAFDNIYPILKSF 297
>gi|390333257|ref|XP_795391.3| PREDICTED: TATA-box-binding protein-like [Strongylocentrotus
purpuratus]
Length = 262
Score = 276 bits (705), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 152/175 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL C+LDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 84 IVPQLQNIVSTVNLNCRLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 143
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE ++LAARKYAR+VQK+GF +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 144 CTGAKSEDDSRLAARKYARVVQKLGFAAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQF 203
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R++IY AFNNIYP+L +
Sbjct: 204 SSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYDAFNNIYPILKSF 258
>gi|149642959|ref|NP_001092323.1| TATA box-binding protein-like protein 2 [Gallus gallus]
gi|148910849|tpg|DAA06035.1| TPA_inf: TATA box binding protein-like 2 [Gallus gallus]
Length = 328
Score = 276 bits (705), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 127/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 150 IVPQLQNIVSTVNLACKLDLKNIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 209
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV FPI+LE L H F
Sbjct: 210 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQF 269
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 270 SSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPILRGF 324
>gi|20799106|dbj|BAB92075.1| TATA binding protein [Hemicentrotus pulcherrimus]
Length = 250
Score = 275 bits (704), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 152/175 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL C+LDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 72 IVPQLQNIVSTVNLNCRLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 131
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE ++LAARKYAR+VQK+GF +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 132 CTGAKSEDDSRLAARKYARVVQKLGFAAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQF 191
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R++IY AFNNIYP+L +
Sbjct: 192 SSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYDAFNNIYPILKSF 246
>gi|3599497|gb|AAC35362.1| TATA-binding protein [Lytechinus variegatus]
Length = 271
Score = 275 bits (704), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 152/175 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKL+LKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 93 IVPQLQNIVSTVNLSCKLELKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 152
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE ++LAARKYAR+VQK+GF +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 153 CTGAKSEDDSRLAARKYARVVQKLGFAAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQF 212
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R++IY AFNNIYP+L +
Sbjct: 213 SSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYDAFNNIYPILKSF 267
>gi|158287840|ref|XP_309748.2| AGAP010958-PA [Anopheles gambiae str. PEST]
gi|157019382|gb|EAA45305.2| AGAP010958-PA [Anopheles gambiae str. PEST]
Length = 323
Score = 275 bits (703), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 125/173 (72%), Positives = 149/173 (86%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 148 PQLQNIVSTVNLSCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 207
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++LAARKYARI+QK+GF +F DFK+QN+VGSCDV FPI+LE L H FS+
Sbjct: 208 GAKSEDDSRLAARKYARIIQKLGFTAKFLDFKVQNMVGSCDVRFPIRLEGLVLTHGRFSS 267
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R++IY AF NIYP+L +
Sbjct: 268 YEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYDAFENIYPILKSF 320
>gi|312382984|gb|EFR28233.1| hypothetical protein AND_04068 [Anopheles darlingi]
Length = 327
Score = 275 bits (703), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 125/173 (72%), Positives = 149/173 (86%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 152 PQLQNIVSTVNLSCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 211
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++LAARKYARI+QK+GF +F DFK+QN+VGSCDV FPI+LE L H FS+
Sbjct: 212 GAKSEEDSRLAARKYARIIQKLGFTAKFLDFKVQNMVGSCDVRFPIRLEGLVLTHGRFSS 271
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R++IY AF NIYP+L +
Sbjct: 272 YEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYDAFENIYPILKSF 324
>gi|297829888|ref|XP_002882826.1| transcription factor IID-1 [Arabidopsis lyrata subsp. lyrata]
gi|297328666|gb|EFH59085.1| transcription factor IID-1 [Arabidopsis lyrata subsp. lyrata]
Length = 200
Score = 275 bits (703), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 130/180 (72%), Positives = 152/180 (84%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL+CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 21 IVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 80
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE +K+AARKYARIVQK+GF +FKDFKIQNIVGSCDV+FPI+LE L HA F
Sbjct: 81 CTGAKSEYFSKMAARKYARIVQKLGFSAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHAAF 140
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYDQ 180
S+YEPELFPGLIYRMK P + +LIF+SGK+VITGAK RE+ Y AF NIYPVL + Q
Sbjct: 141 SSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMREETYRAFENIYPVLTEFRKIQQ 200
>gi|344228428|gb|EGV60314.1| TBP-domain-containing protein [Candida tenuis ATCC 10573]
Length = 237
Score = 275 bits (702), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 127/175 (72%), Positives = 152/175 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+CKLDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 60 IVPTLQNIVATVNLDCKLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 119
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE+ +KLA+RKYARI+QK+GF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 120 VTGAKSENDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTF 179
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IYAAF IYPVL+ +
Sbjct: 180 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYAAFEAIYPVLSEF 234
>gi|50547559|ref|XP_501249.1| YALI0B23056p [Yarrowia lipolytica]
gi|49647115|emb|CAG83502.1| YALI0B23056p [Yarrowia lipolytica CLIB122]
Length = 227
Score = 275 bits (702), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 151/175 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 50 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 109
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGA+SE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 110 VTGARSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTF 169
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IYAAF IYPVLN +
Sbjct: 170 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYAAFEAIYPVLNEF 224
>gi|384245994|gb|EIE19486.1| TBP-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 245
Score = 275 bits (702), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+CKLDLK IA ARNAEYNP RF+AV MRI++PKTTAL+F+SGK+V
Sbjct: 26 IVPTLQNIVATVNLDCKLDLKTIAQKARNAEYNPKRFAAVIMRIRDPKTTALVFASGKMV 85
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE A+ AARKYA+I+QK+ FP FKDFKIQNIVGSCDV+FPI+LE LN H MF
Sbjct: 86 CTGAKSEEHARTAARKYAKIIQKLDFPATFKDFKIQNIVGSCDVKFPIRLEGLNYSHGMF 145
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRMK+P V +LIF+SGKVV+TG K RE IY AF +IYPVL +
Sbjct: 146 SSYEPELFPGLIYRMKEPKVVLLIFVSGKVVLTGGKKREDIYEAFESIYPVLQEF 200
>gi|242022166|ref|XP_002431512.1| trf2 protein, putative [Pediculus humanus corporis]
gi|212516806|gb|EEB18774.1| trf2 protein, putative [Pediculus humanus corporis]
Length = 298
Score = 275 bits (702), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 152/175 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLKKIA+HARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 121 IVPQLQNIVSTVNLGCKLDLKKIAIHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 180
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE ++LAARKYARI+QK+GF +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 181 CTGAKSEDDSRLAARKYARIIQKLGFAAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQF 240
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R++IY AF+NIYP+L +
Sbjct: 241 SSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYEAFDNIYPILKSF 295
>gi|45201230|ref|NP_986800.1| AGR134Wp [Ashbya gossypii ATCC 10895]
gi|44986084|gb|AAS54624.1| AGR134Wp [Ashbya gossypii ATCC 10895]
gi|374110049|gb|AEY98954.1| FAGR134Wp [Ashbya gossypii FDAG1]
Length = 239
Score = 275 bits (702), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK +ALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 62 IVPTLQNIVATVNLDCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 121
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QKIGF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 122 VTGAKSEDDSKLASRKYARIIQKIGFSAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTF 181
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 182 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEF 236
>gi|157167852|ref|XP_001662432.1| tata-box binding protein [Aedes aegypti]
gi|108871290|gb|EAT35515.1| AAEL012330-PA [Aedes aegypti]
Length = 319
Score = 275 bits (702), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 124/173 (71%), Positives = 150/173 (86%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL C+LDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 144 PQLQNIVSTVNLSCRLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 203
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++LAARKYARI+QK+GF +F DFK+QN+VGSCDV FPI+LE L H FS+
Sbjct: 204 GAKSEEDSRLAARKYARIIQKLGFTAKFLDFKVQNMVGSCDVRFPIRLEGLVLTHGKFSS 263
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R++IY AF+NIYP+L +
Sbjct: 264 YEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYDAFDNIYPILKSF 316
>gi|449296869|gb|EMC92888.1| hypothetical protein BAUCODRAFT_76816 [Baudoinia compniacensis UAMH
10762]
Length = 240
Score = 275 bits (702), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 151/175 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 63 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 122
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H MF
Sbjct: 123 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHMF 182
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 183 SSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSDF 237
>gi|170044283|ref|XP_001849783.1| TATA-box-binding protein [Culex quinquefasciatus]
gi|170067801|ref|XP_001868625.1| TATA-box-binding protein [Culex quinquefasciatus]
gi|167863845|gb|EDS27228.1| TATA-box-binding protein [Culex quinquefasciatus]
gi|167867494|gb|EDS30877.1| TATA-box-binding protein [Culex quinquefasciatus]
Length = 322
Score = 274 bits (701), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 124/173 (71%), Positives = 150/173 (86%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL C+LDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 147 PQLQNIVSTVNLSCRLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 206
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++LAARKYARI+QK+GF +F DFK+QN+VGSCDV FPI+LE L H FS+
Sbjct: 207 GAKSEEDSRLAARKYARIIQKLGFTAKFLDFKVQNMVGSCDVRFPIRLEGLVLTHGKFSS 266
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R++IY AF+NIYP+L +
Sbjct: 267 YEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYDAFDNIYPILKSF 319
>gi|255552716|ref|XP_002517401.1| TATA-box binding protein, putative [Ricinus communis]
gi|223543412|gb|EEF44943.1| TATA-box binding protein, putative [Ricinus communis]
Length = 190
Score = 274 bits (701), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 125/171 (73%), Positives = 152/171 (88%), Gaps = 1/171 (0%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P++QNIV+T+NL+CKLDLK IALH+RN+EYNP RFSAV MR+++PKTTAL+F+SGK+VCT
Sbjct: 15 PILQNIVSTVNLDCKLDLKDIALHSRNSEYNPRRFSAVIMRLRDPKTTALLFASGKMVCT 74
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLER-LNGFHAMFS 121
GAKSE+Q+K+AARKYARIVQK+GFP +FKDFKIQNIV SCDV F I+LE+ + HA FS
Sbjct: 75 GAKSEAQSKIAARKYARIVQKLGFPAKFKDFKIQNIVASCDVNFRIRLEKFVYSKHAAFS 134
Query: 122 TYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
+YEPE+FPG+IYRM KP + MLIF+SGK+VITGAK RE YAAF NIYPVL
Sbjct: 135 SYEPEIFPGMIYRMTKPKIVMLIFVSGKIVITGAKTREDTYAAFTNIYPVL 185
>gi|294659650|ref|XP_002770623.1| DEHA2G11836p [Debaryomyces hansenii CBS767]
gi|199434124|emb|CAR65957.1| DEHA2G11836p [Debaryomyces hansenii CBS767]
Length = 243
Score = 274 bits (701), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 151/175 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 66 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 125
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 126 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTF 185
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IYAAF IYPVL+ +
Sbjct: 186 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYAAFEAIYPVLSEF 240
>gi|448112531|ref|XP_004202120.1| Piso0_001599 [Millerozyma farinosa CBS 7064]
gi|448115084|ref|XP_004202744.1| Piso0_001599 [Millerozyma farinosa CBS 7064]
gi|359383612|emb|CCE79528.1| Piso0_001599 [Millerozyma farinosa CBS 7064]
gi|359465109|emb|CCE88814.1| Piso0_001599 [Millerozyma farinosa CBS 7064]
Length = 241
Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 151/175 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 64 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 123
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 124 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTF 183
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IYAAF IYPVL+ +
Sbjct: 184 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYAAFEAIYPVLSEF 238
>gi|426376979|ref|XP_004055257.1| PREDICTED: TATA box-binding protein-like protein 2 [Gorilla gorilla
gorilla]
Length = 375
Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 126/172 (73%), Positives = 149/172 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLKKIAL A+NAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 198 IVPQLQNIVSTVNLACKLDLKKIALQAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 257
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV FPI+LE L H F
Sbjct: 258 CTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQF 317
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L
Sbjct: 318 SSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPIL 369
>gi|126274078|ref|XP_001387406.1| TATA-binding protein [Scheffersomyces stipitis CBS 6054]
gi|126213276|gb|EAZ63383.1| TATA-binding protein [Scheffersomyces stipitis CBS 6054]
Length = 247
Score = 274 bits (700), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 152/175 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 70 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 129
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 130 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTF 189
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IYAAF +IYPVL+ +
Sbjct: 190 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYAAFESIYPVLSEF 244
>gi|453083461|gb|EMF11507.1| transcription initiation factor TFIID, TATA binding protein
[Mycosphaerella populorum SO2202]
Length = 258
Score = 274 bits (700), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 151/175 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 81 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 140
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H MF
Sbjct: 141 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHMF 200
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 201 SSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSDF 255
>gi|297695161|ref|XP_002824816.1| PREDICTED: TATA box-binding protein-like protein 2 [Pongo abelii]
Length = 375
Score = 274 bits (700), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 126/172 (73%), Positives = 149/172 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLKKIALHA+NAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 198 IVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 257
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV F I+LE L H F
Sbjct: 258 CTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFSIRLEGLVLTHQQF 317
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L
Sbjct: 318 SSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPIL 369
>gi|348573495|ref|XP_003472526.1| PREDICTED: TATA box-binding protein-like protein 2-like [Cavia
porcellus]
Length = 397
Score = 274 bits (700), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLKKIALHA+NAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 220 IVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 279
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV F I+LE L H F
Sbjct: 280 CTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFSIRLEGLVLTHQQF 339
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 340 SSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPILKSF 394
>gi|260941770|ref|XP_002615051.1| TATA-box binding protein [Clavispora lusitaniae ATCC 42720]
gi|238851474|gb|EEQ40938.1| TATA-box binding protein [Clavispora lusitaniae ATCC 42720]
Length = 237
Score = 274 bits (700), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 151/175 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 60 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 119
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 120 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTF 179
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IYAAF IYPVL+ +
Sbjct: 180 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYAAFEAIYPVLSEF 234
>gi|327262117|ref|XP_003215872.1| PREDICTED: TATA-box-binding protein-like [Anolis carolinensis]
Length = 300
Score = 274 bits (700), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 122 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 181
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 182 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 241
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 242 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 296
>gi|149248310|ref|XP_001528542.1| TATA-box binding protein [Lodderomyces elongisporus NRRL YB-4239]
gi|146448496|gb|EDK42884.1| TATA-box binding protein [Lodderomyces elongisporus NRRL YB-4239]
Length = 248
Score = 274 bits (700), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 151/175 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI++PKTTALIF+SGK+V
Sbjct: 71 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMV 130
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 131 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTF 190
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IYAAF IYPVL+ +
Sbjct: 191 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYAAFEAIYPVLSEF 245
>gi|157265563|ref|NP_001098077.1| TATA-box-binding protein [Pan troglodytes]
gi|148910853|tpg|DAA06037.1| TPA_inf: TATA box binding protein [Pan troglodytes]
Length = 336
Score = 273 bits (699), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 151/175 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP+RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 158 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPTRFAAVIMRIREPRTTALIFSSGKMV 217
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 218 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 277
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 278 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 332
>gi|452989027|gb|EME88782.1| hypothetical protein MYCFIDRAFT_209898 [Pseudocercospora fijiensis
CIRAD86]
Length = 260
Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 125/173 (72%), Positives = 150/173 (86%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V T
Sbjct: 85 PTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVT 144
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H MFS+
Sbjct: 145 GAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHMFSS 204
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 205 YEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSDF 257
>gi|3122948|sp|Q92146.1|TBP_TRIGA RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; AltName: Full=TATA-binding
factor; AltName: Full=TATA-box factor; AltName:
Full=Transcription initiation factor TFIID TBP subunit
gi|808897|dbj|BAA06554.1| TATA-box binding protein [Trimeresurus gramineus]
gi|1483197|dbj|BAA06560.1| TATA-box binding protein [Trimeresurus gramineus]
Length = 302
Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 124 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 183
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 184 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 243
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 244 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRGEIYEAFENIYPILKGF 298
>gi|3122947|sp|Q92117.1|TBP_TRIFL RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; AltName: Full=TATA-binding
factor; AltName: Full=TATA-box factor; AltName:
Full=Transcription initiation factor TFIID TBP subunit
gi|1483195|dbj|BAA06555.1| TATA-box binding protein [Trimeresurus flavoviridis]
Length = 300
Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 122 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 181
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 182 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 241
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 242 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRGEIYEAFENIYPILKGF 296
>gi|50308801|ref|XP_454405.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643540|emb|CAG99492.1| KLLA0E10099p [Kluyveromyces lactis]
Length = 233
Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 125/173 (72%), Positives = 149/173 (86%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIVAT+NL+C+LDLK +ALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V T
Sbjct: 58 PTLQNIVATVNLDCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVT 117
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE +KLA+RKYARI+QKIGF +F DFKIQNIVGSCDV+FPI+LE L H FS+
Sbjct: 118 GAKSEDDSKLASRKYARIIQKIGFSAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTFSS 177
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 178 YEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEF 230
>gi|296414351|ref|XP_002836865.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295632706|emb|CAZ81056.1| unnamed protein product [Tuber melanosporum]
Length = 253
Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 151/175 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 76 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 135
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 136 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHHF 195
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF +IYPVLN +
Sbjct: 196 SSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYIAFESIYPVLNDF 250
>gi|47551211|ref|NP_999786.1| TATA-box-binding protein [Strongylocentrotus purpuratus]
gi|3122940|sp|P91809.1|TBP_STRPU RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; Short=TBP; AltName:
Full=TATA-binding factor; AltName: Full=TATA-box factor;
AltName: Full=Transcription initiation factor TFIID TBP
subunit
gi|1840134|gb|AAB47272.1| TATA binding protein [Strongylocentrotus purpuratus]
Length = 265
Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 151/175 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL C+LDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 87 IVPQLQNIVSTVNLNCRLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 146
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAK E ++LAARKYAR+VQK+GF +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 147 CTGAKREDNSRLAARKYARVVQKLGFAAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQF 206
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R++IY AFNNIYP+L +
Sbjct: 207 SSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYDAFNNIYPILKSF 261
>gi|402868789|ref|XP_003898470.1| PREDICTED: TATA-box-binding protein isoform 2 [Papio anubis]
Length = 325
Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 147 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 206
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 207 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 266
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 267 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 321
>gi|51948368|ref|NP_001004198.1| TATA-box-binding protein [Rattus norvegicus]
gi|51858685|gb|AAH81939.1| TATA box binding protein [Rattus norvegicus]
gi|149047096|gb|EDL99816.1| TATA box binding protein, isoform CRA_a [Rattus norvegicus]
gi|149047097|gb|EDL99817.1| TATA box binding protein, isoform CRA_a [Rattus norvegicus]
Length = 318
Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 140 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 199
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 200 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 259
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 260 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 314
>gi|126310795|ref|XP_001371815.1| PREDICTED: TATA-box-binding protein-like isoform 1 [Monodelphis
domestica]
Length = 308
Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 130 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 189
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 190 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 249
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 250 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 304
>gi|148688513|gb|EDL20460.1| TATA box binding protein, isoform CRA_b [Mus musculus]
Length = 323
Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 145 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 204
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 205 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 264
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 265 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 319
>gi|2052377|gb|AAB53097.1| transcription factor IID [Mus musculus domesticus]
Length = 318
Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 140 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 199
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 200 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 259
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 260 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 314
>gi|172073171|ref|NP_038712.3| TATA-box-binding protein [Mus musculus]
gi|135638|sp|P29037.1|TBP_MOUSE RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; AltName: Full=TATA-binding
factor; AltName: Full=TATA-box factor; AltName:
Full=Transcription initiation factor TFIID TBP subunit
gi|220612|dbj|BAA00840.1| TFIID [Mus musculus]
gi|15215158|gb|AAH12685.1| Tbp protein [Mus musculus]
gi|39754750|gb|AAR30866.1| TATA-binding protein [Mus musculus]
gi|148688512|gb|EDL20459.1| TATA box binding protein, isoform CRA_a [Mus musculus]
gi|148688514|gb|EDL20461.1| TATA box binding protein, isoform CRA_a [Mus musculus]
Length = 316
Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 138 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 197
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 198 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 257
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 258 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 312
>gi|62528966|gb|AAX84779.1| TATA-binding protein [Hydractinia echinata]
Length = 227
Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 125/172 (72%), Positives = 150/172 (87%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLKKIA HARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 50 IVPQLQNIVSTVNLSCKLDLKKIASHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 109
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR++QK+GFP +F DFKIQNIVGSCDV+FPI+LE L H+ F
Sbjct: 110 CTGAKSEEQSRLAARKYARVIQKLGFPAKFVDFKIQNIVGSCDVKFPIRLEGLVLAHSQF 169
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF +IYP+L
Sbjct: 170 CSYEPELFPGLIYRMVKPKIVLLIFVSGKVVLTGAKVRSEIYEAFESIYPIL 221
>gi|426235063|ref|XP_004011510.1| PREDICTED: TATA-box-binding protein isoform 3 [Ovis aries]
Length = 288
Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 110 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 169
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 170 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 229
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 230 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 284
>gi|29477183|gb|AAH50136.1| Tbp protein [Mus musculus]
Length = 316
Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 138 IVPRLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 197
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 198 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 257
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 258 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 312
>gi|432114953|gb|ELK36596.1| TATA-box-binding protein [Myotis davidii]
Length = 316
Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 138 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 197
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 198 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 257
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 258 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 312
>gi|345309405|ref|XP_003428833.1| PREDICTED: LOW QUALITY PROTEIN: TATA-box-binding protein-like
[Ornithorhynchus anatinus]
Length = 308
Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 130 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 189
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 190 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 249
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 250 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFQNIYPILKGF 304
>gi|348561403|ref|XP_003466502.1| PREDICTED: TATA-box-binding protein-like [Cavia porcellus]
Length = 321
Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 143 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 202
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 203 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 262
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 263 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 317
>gi|1729911|sp|P53360.1|TBP_MESAU RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; AltName: Full=TATA-binding
factor; AltName: Full=TATA-box factor; AltName:
Full=Transcription initiation factor TFIID TBP subunit
gi|493654|dbj|BAA06287.1| TBP [Mesocricetus auratus]
Length = 318
Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 126/172 (73%), Positives = 149/172 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 140 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 199
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 200 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 259
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L
Sbjct: 260 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPIL 311
>gi|448513790|ref|XP_003867010.1| Tbp1 transcription initiation factor [Candida orthopsilosis Co
90-125]
gi|380351348|emb|CCG21572.1| Tbp1 transcription initiation factor [Candida orthopsilosis Co
90-125]
Length = 251
Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 151/175 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI++PKTTALIF+SGK+V
Sbjct: 74 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMV 133
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 134 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTF 193
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IYAAF IYPVL+ +
Sbjct: 194 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYAAFEAIYPVLSEF 248
>gi|121705502|ref|XP_001271014.1| RNA polymerase I and III transcription factor complex component
Tbp, putative [Aspergillus clavatus NRRL 1]
gi|119399160|gb|EAW09588.1| RNA polymerase I and III transcription factor complex component
Tbp, putative [Aspergillus clavatus NRRL 1]
Length = 273
Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 126/176 (71%), Positives = 151/176 (85%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V T
Sbjct: 89 PTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVT 148
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H FS+
Sbjct: 149 GAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNFSS 208
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTY 178
YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ VT+
Sbjct: 209 YEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSGTVTF 264
>gi|363753780|ref|XP_003647106.1| hypothetical protein Ecym_5549 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890742|gb|AET40289.1| hypothetical protein Ecym_5549 [Eremothecium cymbalariae
DBVPG#7215]
Length = 239
Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK +ALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 62 IVPTLQNIVATVNLDCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 121
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QKIGF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 122 VTGAKSEDDSKLASRKYARIIQKIGFSAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTF 181
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 182 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEF 236
>gi|395839043|ref|XP_003792412.1| PREDICTED: TATA-box-binding protein [Otolemur garnettii]
Length = 326
Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 148 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 207
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 208 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 267
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 268 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 322
>gi|80474966|gb|AAI09055.1| TBP protein [Homo sapiens]
gi|190691993|gb|ACE87771.1| TATA box binding protein protein [synthetic construct]
gi|254071353|gb|ACT64436.1| TATA box binding protein protein [synthetic construct]
Length = 288
Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 110 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 169
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 170 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 229
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 230 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 284
>gi|402868787|ref|XP_003898469.1| PREDICTED: TATA-box-binding protein isoform 1 [Papio anubis]
Length = 335
Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 157 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 216
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 217 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 276
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 277 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 331
>gi|344305038|gb|EGW35270.1| hypothetical protein SPAPADRAFT_58486 [Spathaspora passalidarum
NRRL Y-27907]
Length = 246
Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 151/175 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI++PKTTALIF+SGK+V
Sbjct: 69 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMV 128
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 129 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTF 188
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IYAAF IYPVL+ +
Sbjct: 189 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYAAFEAIYPVLSEF 243
>gi|224047784|ref|XP_002190631.1| PREDICTED: TATA-box-binding protein [Taeniopygia guttata]
Length = 302
Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 124 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 183
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 184 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 243
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 244 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 298
>gi|398406521|ref|XP_003854726.1| transcription factor TFIID complex [Zymoseptoria tritici IPO323]
gi|339474610|gb|EGP89702.1| transcription factor TFIID complex [Zymoseptoria tritici IPO323]
Length = 261
Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 151/175 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 84 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 143
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H MF
Sbjct: 144 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHMF 203
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 204 SSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSDF 258
>gi|224051924|ref|XP_002200431.1| PREDICTED: TATA box-binding protein-like protein 2 [Taeniopygia
guttata]
Length = 322
Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 144 IVPQLQNIVSTVNLACKLDLKNIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 203
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV FPI+LE L H F
Sbjct: 204 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQF 263
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGL+YRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 264 SSYEPELFPGLVYRMVKPRIVLLIFVSGKVVLTGAKDRSEIYEAFENIYPILRGF 318
>gi|45384144|ref|NP_990434.1| TATA-box-binding protein [Gallus gallus]
gi|3122919|sp|O13270.1|TBP_CHICK RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; AltName: Full=TATA-binding
factor; AltName: Full=TATA-box factor; AltName:
Full=Transcription initiation factor TFIID TBP subunit
gi|2145309|dbj|BAA20296.1| TBP0 [Gallus gallus]
gi|2145310|dbj|BAA20297.1| TBP1 [Gallus gallus]
gi|2145320|dbj|BAA20298.1| TBP [Gallus gallus]
Length = 302
Score = 273 bits (697), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 124 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 183
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 184 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 243
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 244 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 298
>gi|354486300|ref|XP_003505319.1| PREDICTED: TATA-box-binding protein-like [Cricetulus griseus]
gi|344249386|gb|EGW05490.1| TATA-box-binding protein [Cricetulus griseus]
Length = 315
Score = 273 bits (697), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 137 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 196
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 197 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 256
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 257 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 311
>gi|326915583|ref|XP_003204094.1| PREDICTED: TATA-box-binding protein-like [Meleagris gallopavo]
Length = 303
Score = 273 bits (697), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 125 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 184
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 185 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 244
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 245 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 299
>gi|38680348|gb|AAR26545.1| TATA-binding protein [Gallus gallus]
Length = 302
Score = 273 bits (697), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 124 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 183
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 184 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 243
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 244 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 298
>gi|406607792|emb|CCH40897.1| TATA-box-binding protein [Wickerhamomyces ciferrii]
Length = 238
Score = 273 bits (697), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 61 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 120
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 121 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGPF 180
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVLN +
Sbjct: 181 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLNEF 235
>gi|344306713|ref|XP_003422029.1| PREDICTED: TATA-box-binding protein-like [Loxodonta africana]
Length = 324
Score = 273 bits (697), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 146 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 205
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 206 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 265
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 266 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 320
>gi|355723497|gb|AES07910.1| TATA-box binding protein [Mustela putorius furo]
Length = 315
Score = 273 bits (697), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 138 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 197
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 198 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 257
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 258 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 312
>gi|320582327|gb|EFW96544.1| TATA-binding protein, general transcription factor [Ogataea
parapolymorpha DL-1]
Length = 246
Score = 273 bits (697), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+L+LK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 69 IVPTLQNIVATVNLDCRLELKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 128
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLAARKYARI+QK+GF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 129 VTGAKSEDDSKLAARKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAYAHGTF 188
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 189 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYKAFEAIYPVLSEF 243
>gi|115496234|ref|NP_001069210.1| TATA-box-binding protein [Bos taurus]
gi|119367391|sp|Q2HJ52.1|TBP_BOVIN RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; AltName: Full=TATA-binding
factor; AltName: Full=TATA-box factor; AltName:
Full=Transcription initiation factor TFIID TBP subunit
gi|87578225|gb|AAI13309.1| TATA box binding protein [Bos taurus]
Length = 319
Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 141 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 200
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 201 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 260
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 261 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 315
>gi|126282854|ref|XP_001376601.1| PREDICTED: TATA box-binding protein-like protein 2-like
[Monodelphis domestica]
Length = 342
Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 124/172 (72%), Positives = 149/172 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLKKIALHA+NAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 165 IVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 224
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE ++LAARK+AR+VQK+GFP +F DFKIQN+VGSCDV FPI+LE L H F
Sbjct: 225 CTGAKSEELSRLAARKFARVVQKLGFPARFLDFKIQNMVGSCDVRFPIRLESLVLTHQQF 284
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGL+YRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L
Sbjct: 285 SSYEPELFPGLVYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPIL 336
>gi|291414592|ref|XP_002723543.1| PREDICTED: TATA box binding protein [Oryctolagus cuniculus]
Length = 323
Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 145 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 204
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 205 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 264
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 265 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 319
>gi|281351746|gb|EFB27330.1| hypothetical protein PANDA_014728 [Ailuropoda melanoleuca]
Length = 308
Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 130 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 189
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 190 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 249
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 250 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 304
>gi|41056135|ref|NP_956390.1| TATA-box-binding protein [Danio rerio]
gi|82187626|sp|Q7SXL3.1|TBP_DANRE RecName: Full=TATA-box-binding protein; Short=zTBP; AltName:
Full=TATA sequence-binding protein; AltName:
Full=TATA-binding factor; AltName: Full=TATA-box factor;
Short=zfTBF; AltName: Full=Transcription initiation
factor TFIID TBP subunit
gi|33416871|gb|AAH55549.1| TATA box binding protein [Danio rerio]
gi|37727187|gb|AAO34524.1| TATA-binding protein [Danio rerio]
gi|41351472|gb|AAH65860.1| TATA box binding protein [Danio rerio]
Length = 302
Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 124 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 183
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 184 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 243
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 244 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRGEIYEAFENIYPILKGF 298
>gi|440894479|gb|ELR46921.1| TATA-box-binding protein [Bos grunniens mutus]
Length = 312
Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 134 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 193
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 194 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 253
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 254 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 308
>gi|354546879|emb|CCE43611.1| hypothetical protein CPAR2_212550 [Candida parapsilosis]
Length = 259
Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 151/175 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI++PKTTALIF+SGK+V
Sbjct: 82 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMV 141
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 142 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTF 201
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IYAAF IYPVL+ +
Sbjct: 202 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYAAFEAIYPVLSEF 256
>gi|54696180|gb|AAV38462.1| TATA box binding protein [synthetic construct]
Length = 337
Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 158 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 217
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 218 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 277
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 278 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 332
>gi|297679683|ref|XP_002817654.1| PREDICTED: TATA-box-binding protein [Pongo abelii]
Length = 327
Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 149 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 208
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 209 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 268
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 269 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 323
>gi|1582692|prf||2119243A TATA box-binding protein
Length = 338
Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 160 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 219
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 220 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 279
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 280 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 334
>gi|301779702|ref|XP_002925261.1| PREDICTED: TATA-box-binding protein-like [Ailuropoda melanoleuca]
Length = 324
Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 146 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 205
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 206 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 265
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 266 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 320
>gi|73973822|ref|XP_854525.1| PREDICTED: TATA-box-binding protein isoform 1 [Canis lupus
familiaris]
Length = 324
Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 146 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 205
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 206 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 265
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 266 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 320
>gi|426355237|ref|XP_004045035.1| PREDICTED: TATA-box-binding protein isoform 1 [Gorilla gorilla
gorilla]
Length = 331
Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 153 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 212
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 213 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 272
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 273 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 327
>gi|80478871|gb|AAI09054.1| TATA box binding protein [Homo sapiens]
gi|82571689|gb|AAI10342.1| TATA box binding protein [Homo sapiens]
gi|119567803|gb|EAW47418.1| TATA box binding protein, isoform CRA_a [Homo sapiens]
gi|119567804|gb|EAW47419.1| TATA box binding protein, isoform CRA_a [Homo sapiens]
gi|190689691|gb|ACE86620.1| TATA box binding protein protein [synthetic construct]
gi|190691053|gb|ACE87301.1| TATA box binding protein protein [synthetic construct]
Length = 338
Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 160 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 219
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 220 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 279
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 280 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 334
>gi|37066|emb|CAA38736.1| TFIID [Homo sapiens]
gi|227072|prf||1613451A TATA binding factor TFIID
Length = 335
Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 157 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 216
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 217 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 276
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 277 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 331
>gi|4507379|ref|NP_003185.1| TATA-box-binding protein isoform 1 [Homo sapiens]
gi|1351223|sp|P20226.2|TBP_HUMAN RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; AltName: Full=TATA-binding
factor; AltName: Full=TATA-box factor; AltName:
Full=Transcription initiation factor TFIID TBP subunit
gi|339492|gb|AAA36731.1| TATA-box binding protein [Homo sapiens]
gi|48145669|emb|CAG33057.1| TBP [Homo sapiens]
Length = 339
Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 161 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 220
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 221 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 280
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 281 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 335
>gi|397502104|ref|XP_003821708.1| PREDICTED: TATA-box-binding protein isoform 1 [Pan paniscus]
Length = 332
Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 154 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 213
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 214 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 273
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 274 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 328
>gi|332264009|ref|XP_003281041.1| PREDICTED: TATA-box-binding protein [Nomascus leucogenys]
Length = 328
Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 150 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 209
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 210 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 269
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 270 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 324
>gi|296199650|ref|XP_002747248.1| PREDICTED: TATA-box-binding protein [Callithrix jacchus]
Length = 333
Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 155 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 214
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 215 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 274
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 275 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 329
>gi|194390034|dbj|BAG60533.1| unnamed protein product [Homo sapiens]
Length = 316
Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 138 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 197
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 198 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 257
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 258 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 312
>gi|149743967|ref|XP_001499379.1| PREDICTED: TATA-box-binding protein-like isoform 1 [Equus caballus]
Length = 329
Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 151 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 210
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 211 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 270
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 271 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 325
>gi|432852539|ref|XP_004067298.1| PREDICTED: TATA-box-binding protein [Oryzias latipes]
Length = 305
Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 126/172 (73%), Positives = 149/172 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 127 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 186
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 187 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 246
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L
Sbjct: 247 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPIL 298
>gi|426235061|ref|XP_004011509.1| PREDICTED: TATA-box-binding protein isoform 2 [Ovis aries]
Length = 306
Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 128 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 187
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 188 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 247
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 248 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 302
>gi|426235059|ref|XP_004011508.1| PREDICTED: TATA-box-binding protein isoform 1 [Ovis aries]
Length = 314
Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 136 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 195
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 196 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 255
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 256 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 310
>gi|229577173|ref|NP_001153317.1| TATA binding protein [Nasonia vitripennis]
Length = 306
Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 125/173 (72%), Positives = 151/173 (87%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL KLDLKKIALHARNAE+ P RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 131 PQVQNIVSTVNLNGKLDLKKIALHARNAEFIPKRFAAVIMRIREPRTTALIFSSGKMVCT 190
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++LAARKYARI+QK+GFP +F DFKIQN+VGSCDV+FPI+LE L HA FS+
Sbjct: 191 GAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHAQFSS 250
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R++IY AF+NIYP+L +
Sbjct: 251 YEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYEAFDNIYPILKSF 303
>gi|403305888|ref|XP_003943481.1| PREDICTED: TATA-box-binding protein [Saimiri boliviensis
boliviensis]
Length = 326
Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 148 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 207
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 208 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 267
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 268 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 322
>gi|426355239|ref|XP_004045036.1| PREDICTED: TATA-box-binding protein isoform 2 [Gorilla gorilla
gorilla]
Length = 311
Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 133 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 192
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 193 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 252
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 253 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 307
>gi|397502106|ref|XP_003821709.1| PREDICTED: TATA-box-binding protein isoform 2 [Pan paniscus]
Length = 312
Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 134 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 193
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 194 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 253
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 254 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 308
>gi|285026520|ref|NP_001165556.1| TATA-box-binding protein isoform 2 [Homo sapiens]
Length = 319
Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 141 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 200
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 201 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 260
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 261 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 315
>gi|355562211|gb|EHH18843.1| hypothetical protein EGK_15529 [Macaca mulatta]
Length = 326
Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 126/172 (73%), Positives = 149/172 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 148 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 207
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 208 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 267
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L
Sbjct: 268 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPIL 319
>gi|291190590|ref|NP_001167145.1| TATA-box-binding protein [Salmo salar]
gi|223648344|gb|ACN10930.1| TATA-box-binding protein [Salmo salar]
Length = 299
Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 126/172 (73%), Positives = 149/172 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 121 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 180
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 181 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 240
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L
Sbjct: 241 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRGEIYEAFENIYPIL 292
>gi|431895824|gb|ELK05242.1| TATA box-binding protein-like protein 2 [Pteropus alecto]
Length = 342
Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 126/170 (74%), Positives = 147/170 (86%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T NL CKLDLKKIALHA+NAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 167 PQLQNIVSTANLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 226
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV F I+LE L H FS+
Sbjct: 227 GAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFSIRLEGLVLTHQQFSS 286
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L
Sbjct: 287 YEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPIL 336
>gi|348534076|ref|XP_003454529.1| PREDICTED: TATA-box-binding protein-like [Oreochromis niloticus]
Length = 333
Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 155 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 214
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 215 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 274
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 275 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRGEIYEAFENIYPILKGF 329
>gi|17298076|dbj|BAB78512.1| TATA-box binding protein [Oryzias latipes]
Length = 320
Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 126/172 (73%), Positives = 149/172 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 142 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 201
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 202 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 261
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L
Sbjct: 262 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPIL 313
>gi|335280289|ref|XP_001924325.3| PREDICTED: TATA box-binding protein-like protein 2-like [Sus
scrofa]
Length = 379
Score = 272 bits (696), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLKKIALHA+NAEYNP R +AV MRI+EP+TTALIFSSGK+V
Sbjct: 202 IVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRLAAVIMRIREPRTTALIFSSGKMV 261
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LA+RKYAR+VQK+GFP +F +FKIQN+VGSCDV FPI+LE L H F
Sbjct: 262 CTGAKSEEQSRLASRKYARVVQKLGFPARFLNFKIQNMVGSCDVRFPIRLEGLVLTHPEF 321
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 322 SSYEPELFPGLIYRMVKPQIVLLIFVSGKVVLTGAKERSEIYEAFENIYPILKDF 376
>gi|153792245|ref|NP_001093264.1| TATA box binding protein [Takifugu rubripes]
gi|148910855|tpg|DAA06038.1| TPA_inf: TATA box binding protein [Takifugu rubripes]
Length = 301
Score = 272 bits (696), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 126/172 (73%), Positives = 148/172 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 123 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 182
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV FPI+LE L H F
Sbjct: 183 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQF 242
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L
Sbjct: 243 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPIL 294
>gi|109073359|ref|XP_001085368.1| PREDICTED: TATA-box-binding protein isoform 3 [Macaca mulatta]
gi|75075688|sp|Q4R4F5.1|TBP_MACFA RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; AltName: Full=TATA-binding
factor; AltName: Full=TATA-box factor; AltName:
Full=Transcription initiation factor TFIID TBP subunit
gi|67968013|dbj|BAE00488.1| unnamed protein product [Macaca fascicularis]
gi|67971336|dbj|BAE02010.1| unnamed protein product [Macaca fascicularis]
gi|355749048|gb|EHH53531.1| hypothetical protein EGM_14191 [Macaca fascicularis]
Length = 326
Score = 272 bits (696), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 126/172 (73%), Positives = 149/172 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 148 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 207
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 208 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 267
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L
Sbjct: 268 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPIL 319
>gi|296215093|ref|XP_002807283.1| PREDICTED: LOW QUALITY PROTEIN: TATA box-binding protein-like
protein 2 [Callithrix jacchus]
Length = 373
Score = 272 bits (696), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 125/172 (72%), Positives = 150/172 (87%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLKKIALHA+NAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 196 IVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 255
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGA+SE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 256 CTGARSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 315
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +I AF NIYP+L
Sbjct: 316 SSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEICEAFENIYPIL 367
>gi|195425556|ref|XP_002061064.1| GK10649 [Drosophila willistoni]
gi|194157149|gb|EDW72050.1| GK10649 [Drosophila willistoni]
Length = 351
Score = 272 bits (696), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 124/173 (71%), Positives = 151/173 (87%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 175 PQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 234
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++LAARKYARI+QK+GFP +F DFKIQN+VGSCDV+FPI+LE L H FS+
Sbjct: 235 GAKSEDDSRLAARKYARIIQKLGFPAKFMDFKIQNMVGSCDVKFPIRLEGLVLTHCNFSS 294
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM +P + +LIF+SGKVV+TGAK R++IY AF+ I+P+L +
Sbjct: 295 YEPELFPGLIYRMVRPRIVLLIFVSGKVVLTGAKVRQEIYDAFDKIFPILKKF 347
>gi|302663669|ref|XP_003023473.1| hypothetical protein TRV_02367 [Trichophyton verrucosum HKI 0517]
gi|291187474|gb|EFE42855.1| hypothetical protein TRV_02367 [Trichophyton verrucosum HKI 0517]
Length = 275
Score = 272 bits (696), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 127/181 (70%), Positives = 153/181 (84%), Gaps = 1/181 (0%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 80 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 139
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 140 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNF 199
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNV-YVTYD 179
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL V Y+ +
Sbjct: 200 SSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLTVSYLVHL 259
Query: 180 Q 180
Q
Sbjct: 260 Q 260
>gi|452839378|gb|EME41317.1| TATA-box binding-like protein [Dothistroma septosporum NZE10]
Length = 254
Score = 272 bits (696), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 151/175 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 77 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 136
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H MF
Sbjct: 137 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHMF 196
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 197 SSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSDF 251
>gi|540193|gb|AAA79367.1| TATA binding protein [Pneumocystis carinii]
Length = 230
Score = 272 bits (696), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 52 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 111
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 112 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAYSHGTF 171
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 172 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVREEIYQAFEAIYPVLSEF 226
>gi|147906485|ref|NP_001089038.1| TATA box binding protein [Xenopus laevis]
gi|57032530|gb|AAH88819.1| LOC503680 protein [Xenopus laevis]
Length = 296
Score = 272 bits (696), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 126/172 (73%), Positives = 149/172 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 118 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 177
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 178 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 237
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L
Sbjct: 238 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPIL 289
>gi|62858635|ref|NP_001016339.1| TATA-box-binding protein [Xenopus (Silurana) tropicalis]
gi|123907365|sp|Q28GG8.1|TBP_XENTR RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; AltName: Full=TATA-binding
factor; AltName: Full=TATA-box factor; AltName:
Full=Transcription initiation factor TFIID TBP subunit
gi|89266978|emb|CAJ83650.1| TATA box binding protein [Xenopus (Silurana) tropicalis]
gi|169642632|gb|AAI60510.1| TATA box binding protein [Xenopus (Silurana) tropicalis]
gi|213624491|gb|AAI71176.1| TATA box binding protein [Xenopus (Silurana) tropicalis]
gi|213627356|gb|AAI71174.1| TATA box binding protein [Xenopus (Silurana) tropicalis]
Length = 297
Score = 272 bits (696), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 119 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 178
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 179 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 238
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 239 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 293
>gi|254566373|ref|XP_002490297.1| TATA-binding protein, general transcription factor [Komagataella
pastoris GS115]
gi|238030093|emb|CAY68016.1| TATA-binding protein, general transcription factor [Komagataella
pastoris GS115]
gi|328350692|emb|CCA37092.1| TATA-box-binding protein [Komagataella pastoris CBS 7435]
Length = 243
Score = 272 bits (696), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 66 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 125
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 126 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGHF 185
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 186 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKKREEIYQAFEAIYPVLSEF 240
>gi|194881988|ref|XP_001975095.1| GG20753 [Drosophila erecta]
gi|190658282|gb|EDV55495.1| GG20753 [Drosophila erecta]
Length = 349
Score = 272 bits (696), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 124/173 (71%), Positives = 151/173 (87%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 173 PQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 232
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++LAARKYARI+QK+GFP +F DFKIQN+VGSCDV+FPI+LE L H FS+
Sbjct: 233 GAKSEDDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHCNFSS 292
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM +P + +LIF+SGKVV+TGAK R++IY AF+ I+P+L +
Sbjct: 293 YEPELFPGLIYRMVRPRIVLLIFVSGKVVLTGAKVRQEIYDAFDKIFPILKKF 345
>gi|195403015|ref|XP_002060091.1| GJ14917 [Drosophila virilis]
gi|194149413|gb|EDW65108.1| GJ14917 [Drosophila virilis]
Length = 352
Score = 272 bits (696), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 124/173 (71%), Positives = 151/173 (87%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 176 PQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 235
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++LAARKYARI+QK+GFP +F DFKIQN+VGSCDV+FPI+LE L H FS+
Sbjct: 236 GAKSEDDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHCNFSS 295
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM +P + +LIF+SGKVV+TGAK R++IY AF+ I+P+L +
Sbjct: 296 YEPELFPGLIYRMVRPRIVLLIFVSGKVVLTGAKVRQEIYDAFDKIFPILKKF 348
>gi|15826400|pdb|1JFI|C Chain C, Crystal Structure Of The Nc2-Tbp-Dna Ternary Complex
Length = 185
Score = 272 bits (696), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 7 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 66
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 67 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 126
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 127 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 181
>gi|147900802|ref|NP_001084369.1| TATA-box-binding protein [Xenopus laevis]
gi|135642|sp|P27633.1|TBP_XENLA RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; AltName: Full=TATA-binding
factor; AltName: Full=TATA-box factor; AltName:
Full=Transcription initiation factor TFIID TBP subunit
gi|65149|emb|CAA46832.1| transcription factor [Xenopus laevis]
gi|76779674|gb|AAI06645.1| TFIIDtau protein [Xenopus laevis]
Length = 297
Score = 272 bits (696), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 119 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 178
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 179 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 238
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 239 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 293
>gi|194388082|dbj|BAG65425.1| unnamed protein product [Homo sapiens]
Length = 318
Score = 272 bits (696), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 140 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 199
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 200 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 259
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 260 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 314
>gi|195057981|ref|XP_001995362.1| GH23121 [Drosophila grimshawi]
gi|193899568|gb|EDV98434.1| GH23121 [Drosophila grimshawi]
Length = 348
Score = 272 bits (696), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 124/173 (71%), Positives = 151/173 (87%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 172 PQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 231
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++LAARKYARI+QK+GFP +F DFKIQN+VGSCDV+FPI+LE L H FS+
Sbjct: 232 GAKSEDDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHCNFSS 291
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM +P + +LIF+SGKVV+TGAK R++IY AF+ I+P+L +
Sbjct: 292 YEPELFPGLIYRMVRPRIVLLIFVSGKVVLTGAKVRQEIYDAFDKIFPILKKF 344
>gi|1827869|pdb|1TGH|A Chain A, Tata Binding Protein (Tbp)DNA COMPLEX
Length = 185
Score = 272 bits (695), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 7 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 66
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 67 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 126
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 127 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 181
>gi|196007384|ref|XP_002113558.1| TATA-binding protein [Trichoplax adhaerens]
gi|190583962|gb|EDV24032.1| TATA-binding protein [Trichoplax adhaerens]
Length = 203
Score = 272 bits (695), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 121/173 (69%), Positives = 153/173 (88%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL C+L+L++IALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 28 PQLQNIVSTVNLGCRLELQRIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 87
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE Q++LAARKYAR++QK+GFP +F +F+IQN+VGSCDV+FPI+LE L H FS+
Sbjct: 88 GAKSEEQSRLAARKYARVIQKLGFPAKFTEFRIQNMVGSCDVKFPIRLEGLVLAHGQFSS 147
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R++IY AF+NIYP+L +
Sbjct: 148 YEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRDEIYEAFDNIYPILKGF 200
>gi|195380351|ref|XP_002048934.1| Tbp [Drosophila virilis]
gi|194143731|gb|EDW60127.1| Tbp [Drosophila virilis]
Length = 351
Score = 272 bits (695), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 124/173 (71%), Positives = 151/173 (87%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 175 PQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 234
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++LAARKYARI+QK+GFP +F DFKIQN+VGSCDV+FPI+LE L H FS+
Sbjct: 235 GAKSEDDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHCNFSS 294
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM +P + +LIF+SGKVV+TGAK R++IY AF+ I+P+L +
Sbjct: 295 YEPELFPGLIYRMVRPRIVLLIFVSGKVVLTGAKVRQEIYDAFDKIFPILKKF 347
>gi|125807343|ref|XP_001360369.1| GA22088 [Drosophila pseudoobscura pseudoobscura]
gi|195149788|ref|XP_002015837.1| GL11271 [Drosophila persimilis]
gi|54635541|gb|EAL24944.1| GA22088 [Drosophila pseudoobscura pseudoobscura]
gi|194109684|gb|EDW31727.1| GL11271 [Drosophila persimilis]
Length = 345
Score = 272 bits (695), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 124/173 (71%), Positives = 151/173 (87%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 169 PQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 228
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++LAARKYARI+QK+GFP +F DFKIQN+VGSCDV+FPI+LE L H FS+
Sbjct: 229 GAKSEDDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHCNFSS 288
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM +P + +LIF+SGKVV+TGAK R++IY AF+ I+P+L +
Sbjct: 289 YEPELFPGLIYRMVRPRIVLLIFVSGKVVLTGAKVRQEIYDAFDKIFPILKKF 341
>gi|443688559|gb|ELT91221.1| hypothetical protein CAPTEDRAFT_209597 [Capitella teleta]
Length = 209
Score = 272 bits (695), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 127/175 (72%), Positives = 151/175 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV T+N+ CKL+LK+IALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 32 IVPQLQNIVCTVNMACKLELKRIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 91
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE QAKLAARKYARIVQK+GF +F DFKIQN+VGSCDV+FPI+LE L H+ F
Sbjct: 92 CTGAKSEDQAKLAARKYARIVQKLGFEAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHSQF 151
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 152 SSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRGEIYEAFENIYPILKGF 206
>gi|17647997|ref|NP_523805.1| TATA binding protein [Drosophila melanogaster]
gi|135636|sp|P20227.1|TBP_DROME RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; AltName: Full=TATA-binding
factor; AltName: Full=TATA-box factor; AltName:
Full=Transcription initiation factor TFIID TBP subunit
gi|158532|gb|AAA28926.1| TATA-consensus-binding transcription factor TFII [Drosophila
melanogaster]
gi|158542|gb|AAA28931.1| TATA-box binding protein [Drosophila melanogaster]
gi|515665|gb|AAA68629.1| TATA-box binding protein [Drosophila melanogaster]
gi|7291324|gb|AAF46754.1| TATA binding protein [Drosophila melanogaster]
gi|17862662|gb|AAL39808.1| LD44083p [Drosophila melanogaster]
gi|220942262|gb|ACL83674.1| Tbp-PA [synthetic construct]
gi|220952470|gb|ACL88778.1| Tbp-PA [synthetic construct]
Length = 353
Score = 272 bits (695), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 124/173 (71%), Positives = 151/173 (87%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 177 PQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 236
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++LAARKYARI+QK+GFP +F DFKIQN+VGSCDV+FPI+LE L H FS+
Sbjct: 237 GAKSEDDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHCNFSS 296
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM +P + +LIF+SGKVV+TGAK R++IY AF+ I+P+L +
Sbjct: 297 YEPELFPGLIYRMVRPRIVLLIFVSGKVVLTGAKVRQEIYDAFDKIFPILKKF 349
>gi|38492542|pdb|1NVP|A Chain A, Human TfiiaTBPDNA COMPLEX
Length = 181
Score = 272 bits (695), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 126/172 (73%), Positives = 149/172 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 3 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 62
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 63 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 122
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L
Sbjct: 123 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPIL 174
>gi|123909816|sp|Q1JPY4.1|TBPL2_DANRE RecName: Full=TATA box-binding protein-like protein 2;
Short=TBP-like protein 2; AltName: Full=TATA box-binding
protein-related factor 3; Short=TBP-related factor 3
gi|94574475|gb|AAI16554.1| TATA box binding protein like 2 [Danio rerio]
gi|182890344|gb|AAI64097.1| Tbpl2 protein [Danio rerio]
Length = 312
Score = 272 bits (695), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 125/170 (73%), Positives = 146/170 (85%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL C LDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 137 PQLQNIVSTVNLACPLDLKSIALQARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 196
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV FPI+LE L H FS+
Sbjct: 197 GAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVCFPIRLEGLVLTHQQFSS 256
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L
Sbjct: 257 YEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPIL 306
>gi|156846828|ref|XP_001646300.1| hypothetical protein Kpol_1032p36 [Vanderwaltozyma polyspora DSM
70294]
gi|156116975|gb|EDO18442.1| hypothetical protein Kpol_1032p36 [Vanderwaltozyma polyspora DSM
70294]
Length = 251
Score = 272 bits (695), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL C+LDLK +ALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 74 IVPTLQNIVATVNLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 133
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QKIGF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 134 VTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTF 193
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 194 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEF 248
>gi|328768487|gb|EGF78533.1| Tata-Box binding protein ytbp [Batrachochytrium dendrobatidis
JAM81]
Length = 218
Score = 272 bits (695), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 41 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 100
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 101 VTGAKSEDNSKLASRKYARIIQKLGFQAKFTDFKIQNIVGSCDVKFPIRLEGLAYAHGHF 160
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF +IYPVL +
Sbjct: 161 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVREEIYQAFESIYPVLTEF 215
>gi|195585514|ref|XP_002082526.1| GD25175 [Drosophila simulans]
gi|194194535|gb|EDX08111.1| GD25175 [Drosophila simulans]
Length = 352
Score = 272 bits (695), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 124/173 (71%), Positives = 151/173 (87%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 176 PQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 235
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++LAARKYARI+QK+GFP +F DFKIQN+VGSCDV+FPI+LE L H FS+
Sbjct: 236 GAKSEDDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHCNFSS 295
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM +P + +LIF+SGKVV+TGAK R++IY AF+ I+P+L +
Sbjct: 296 YEPELFPGLIYRMVRPRIVLLIFVSGKVVLTGAKVRQEIYDAFDKIFPILKKF 348
>gi|195346517|ref|XP_002039804.1| GM15696 [Drosophila sechellia]
gi|194135153|gb|EDW56669.1| GM15696 [Drosophila sechellia]
Length = 352
Score = 272 bits (695), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 124/173 (71%), Positives = 151/173 (87%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 176 PQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 235
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++LAARKYARI+QK+GFP +F DFKIQN+VGSCDV+FPI+LE L H FS+
Sbjct: 236 GAKSEDSSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHCNFSS 295
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM +P + +LIF+SGKVV+TGAK R++IY AF+ I+P+L +
Sbjct: 296 YEPELFPGLIYRMVRPRIVLLIFVSGKVVLTGAKVRQEIYDAFDKIFPILKKF 348
>gi|194755930|ref|XP_001960232.1| GF11627 [Drosophila ananassae]
gi|190621530|gb|EDV37054.1| GF11627 [Drosophila ananassae]
Length = 348
Score = 272 bits (695), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 152/175 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 170 IVPQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 229
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE ++LAARKYARI+QK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 230 CTGAKSEDDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHCNF 289
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM +P + +LIF+SGKVV+TGAK R++IY AF+ I+P+L +
Sbjct: 290 SSYEPELFPGLIYRMVRPRIVLLIFVSGKVVLTGAKVRQEIYDAFDKIFPILKKF 344
>gi|410076168|ref|XP_003955666.1| hypothetical protein KAFR_0B02330 [Kazachstania africana CBS 2517]
gi|372462249|emb|CCF56531.1| hypothetical protein KAFR_0B02330 [Kazachstania africana CBS 2517]
Length = 230
Score = 272 bits (695), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL C+LDLK +ALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 53 IVPTLQNIVATVNLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 112
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QKIGF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 113 VTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTF 172
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 173 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEF 227
>gi|6980708|pdb|1C9B|B Chain B, Crystal Structure Of A Human Tbp Core Domain-Human Tfiib
Core Domain Complex Bound To An Extended, Modified
Adenoviral Major Late Promoter (Admlp)
gi|6980710|pdb|1C9B|F Chain F, Crystal Structure Of A Human Tbp Core Domain-Human Tfiib
Core Domain Complex Bound To An Extended, Modified
Adenoviral Major Late Promoter (Admlp)
gi|6980712|pdb|1C9B|J Chain J, Crystal Structure Of A Human Tbp Core Domain-Human Tfiib
Core Domain Complex Bound To An Extended, Modified
Adenoviral Major Late Promoter (Admlp)
gi|6980714|pdb|1C9B|N Chain N, Crystal Structure Of A Human Tbp Core Domain-Human Tfiib
Core Domain Complex Bound To An Extended, Modified
Adenoviral Major Late Promoter (Admlp)
gi|6980716|pdb|1C9B|R Chain R, Crystal Structure Of A Human Tbp Core Domain-Human Tfiib
Core Domain Complex Bound To An Extended, Modified
Adenoviral Major Late Promoter (Admlp)
Length = 180
Score = 272 bits (695), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 4 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 63
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 64 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 123
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 124 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 178
>gi|1016266|gb|AAA79092.1| TATA-box binding protein [Drosophila melanogaster]
Length = 354
Score = 271 bits (694), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 124/173 (71%), Positives = 151/173 (87%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 178 PQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 237
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++LAARKYARI+QK+GFP +F DFKIQN+VGSCDV+FPI+LE L H FS+
Sbjct: 238 GAKSEDDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHCNFSS 297
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM +P + +LIF+SGKVV+TGAK R++IY AF+ I+P+L +
Sbjct: 298 YEPELFPGLIYRMVRPRIVLLIFVSGKVVLTGAKVRQEIYDAFDKIFPILKKF 350
>gi|345803952|ref|XP_853710.2| PREDICTED: TATA box binding protein like 2 [Canis lupus familiaris]
Length = 431
Score = 271 bits (694), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLKKIALHA+NAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 254 IVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 313
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV F I LE L H F
Sbjct: 314 CTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFAISLEGLVLTHQQF 373
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 374 SSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPILKGF 428
>gi|366987133|ref|XP_003673333.1| hypothetical protein NCAS_0A03870 [Naumovozyma castellii CBS 4309]
gi|342299196|emb|CCC66945.1| hypothetical protein NCAS_0A03870 [Naumovozyma castellii CBS 4309]
Length = 252
Score = 271 bits (694), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL C+LDLK +ALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 75 IVPTLQNIVATVNLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 134
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QKIGF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 135 VTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTF 194
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 195 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEF 249
>gi|385301759|gb|EIF45927.1| tata-box binding protein [Dekkera bruxellensis AWRI1499]
Length = 259
Score = 271 bits (694), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+L+LK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 82 IVPTLQNIVATVNLDCRLELKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 141
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLAARKYARI+QK+GF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 142 VTGAKSEDDSKLAARKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAYAHGTF 201
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 202 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYKAFEAIYPVLSEF 256
>gi|254586113|ref|XP_002498624.1| ZYRO0G14806p [Zygosaccharomyces rouxii]
gi|238941518|emb|CAR29691.1| ZYRO0G14806p [Zygosaccharomyces rouxii]
Length = 239
Score = 271 bits (694), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL C+LDLK +ALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 62 IVPTLQNIVATVNLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 121
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QKIGF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 122 VTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTF 181
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 182 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEF 236
>gi|26351419|dbj|BAC39346.1| unnamed protein product [Mus musculus]
Length = 316
Score = 271 bits (694), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL RNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 138 IVPQLQNIVSTVNLGCKLDLKTIALRPRNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 197
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 198 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 257
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 258 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 312
>gi|336465922|gb|EGO54087.1| hypothetical protein NEUTE1DRAFT_118055 [Neurospora tetrasperma
FGSC 2508]
gi|350287243|gb|EGZ68490.1| putative transcription initiation factor [Neurospora tetrasperma
FGSC 2509]
Length = 257
Score = 271 bits (694), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
M P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 80 MTPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 139
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 140 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASKHHNF 199
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL +
Sbjct: 200 SSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDF 254
>gi|426234189|ref|XP_004011082.1| PREDICTED: TATA box-binding protein-like protein 2 [Ovis aries]
Length = 443
Score = 271 bits (694), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 125/173 (72%), Positives = 146/173 (84%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLKKIALHA+NAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 268 PQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 327
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE Q++LAARKYAR+VQK+GFP +F DF IQN+V SCDV FPI LE L H FS+
Sbjct: 328 GAKSEEQSRLAARKYARVVQKLGFPARFLDFTIQNMVASCDVRFPISLEGLVLTHQQFSS 387
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R IY AF NIYP+L +
Sbjct: 388 YEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKKRSDIYEAFENIYPILKGF 440
>gi|440897977|gb|ELR49561.1| TATA box-binding protein-like protein 2, partial [Bos grunniens
mutus]
Length = 374
Score = 271 bits (694), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 125/172 (72%), Positives = 146/172 (84%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLKKIALHA+NAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 197 IVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 256
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DF IQN+V SCDV FPI LE L H F
Sbjct: 257 CTGAKSEEQSRLAARKYARVVQKLGFPARFLDFTIQNMVASCDVRFPISLEGLVLTHQQF 316
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R IY AF NIYP+L
Sbjct: 317 SSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKKRSDIYEAFENIYPIL 368
>gi|47550887|ref|NP_999961.1| TATA box-binding protein-like protein 2 [Danio rerio]
gi|32765839|gb|AAP87373.1| TATA-binding protein 2 [Danio rerio]
Length = 312
Score = 271 bits (694), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 125/170 (73%), Positives = 146/170 (85%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL C LDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 137 PQLQNIVSTVNLACPLDLKSIALQARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 196
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV FPI+LE L H FS+
Sbjct: 197 GAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVCFPIRLEGLVLTHQQFSS 256
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L
Sbjct: 257 YEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPIL 306
>gi|85096222|ref|XP_960219.1| TATA-box binding protein [Neurospora crassa OR74A]
gi|28921702|gb|EAA30983.1| TATA-box binding protein [Neurospora crassa OR74A]
gi|39979211|emb|CAE85582.1| probable TRANSCRIPTION INITIATION FACTOR TFIID [Neurospora crassa]
Length = 257
Score = 271 bits (694), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
M P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 80 MTPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 139
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 140 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASKHHNF 199
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL +
Sbjct: 200 SSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDF 254
>gi|195486396|ref|XP_002091492.1| GE13685 [Drosophila yakuba]
gi|194177593|gb|EDW91204.1| GE13685 [Drosophila yakuba]
Length = 349
Score = 271 bits (694), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 124/173 (71%), Positives = 151/173 (87%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 173 PQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 232
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++LAARKYARI+QK+GFP +F DFKIQN+VGSCDV+FPI+LE L H FS+
Sbjct: 233 GAKSEDDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHCNFSS 292
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM +P + +LIF+SGKVV+TGAK R++IY AF+ I+P+L +
Sbjct: 293 YEPELFPGLIYRMVRPRIVLLIFVSGKVVLTGAKVRQEIYDAFDKIFPILKKF 345
>gi|297479762|ref|XP_002690959.1| PREDICTED: TATA box binding protein like 2 [Bos taurus]
gi|296483126|tpg|DAA25241.1| TPA: TATA box binding protein like 2-like [Bos taurus]
Length = 341
Score = 271 bits (694), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 125/172 (72%), Positives = 146/172 (84%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLKKIALHA+NAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 164 IVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 223
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DF IQN+V SCDV FPI LE L H F
Sbjct: 224 CTGAKSEEQSRLAARKYARVVQKLGFPARFLDFTIQNMVASCDVRFPISLEGLVLTHQQF 283
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R IY AF NIYP+L
Sbjct: 284 SSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKKRSDIYEAFENIYPIL 335
>gi|391336328|ref|XP_003742533.1| PREDICTED: TATA-box-binding protein-like [Metaseiulus occidentalis]
Length = 295
Score = 271 bits (694), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 126/170 (74%), Positives = 148/170 (87%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL C+LDLKKIAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 120 PQLQNIVSTVNLGCRLDLKKIALQARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 179
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE Q++LAARKYARIVQK+GF +F DFKIQN+VGSCDV FPI+LE L H FS+
Sbjct: 180 GAKSEDQSRLAARKYARIVQKLGFEAKFLDFKIQNMVGSCDVRFPIRLEGLVLTHCQFSS 239
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF+NIYP+L
Sbjct: 240 YEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRSEIYEAFDNIYPIL 289
>gi|213401857|ref|XP_002171701.1| TATA-box-binding protein [Schizosaccharomyces japonicus yFS275]
gi|211999748|gb|EEB05408.1| TATA-box-binding protein [Schizosaccharomyces japonicus yFS275]
Length = 231
Score = 271 bits (694), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 54 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 113
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 114 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAYSHGTF 173
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 174 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVREEIYQAFEAIYPVLSEF 228
>gi|384501418|gb|EIE91909.1| TATA-box-binding protein [Rhizopus delemar RA 99-880]
Length = 239
Score = 271 bits (694), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 62 ITPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 121
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLAARKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 122 VTGAKSEDDSKLAARKYARIIQKLGFQAKFTDFKIQNIVGSCDIKFPIRLEGLAYSHGHF 181
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL +
Sbjct: 182 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVREEIYQAFQAIYPVLTEF 236
>gi|193620436|ref|XP_001949590.1| PREDICTED: TATA-box-binding protein-like [Acyrthosiphon pisum]
Length = 298
Score = 271 bits (693), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 122/173 (70%), Positives = 150/173 (86%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL C+LDLK IALHARNAE+NP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 123 PQLQNIVSTVNLGCRLDLKTIALHARNAEFNPKRFAAVIMRIREPRTTALIFSSGKMVCT 182
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++LAARKYARI+QK+ FP +F DFKIQN+VGSCDV+FPI+LE L H FS+
Sbjct: 183 GAKSEEDSRLAARKYARIIQKLSFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQFSS 242
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R++IY A++NIYP+L +
Sbjct: 243 YEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYDAYDNIYPILKSF 295
>gi|444316966|ref|XP_004179140.1| hypothetical protein TBLA_0B08050 [Tetrapisispora blattae CBS 6284]
gi|387512180|emb|CCH59621.1| hypothetical protein TBLA_0B08050 [Tetrapisispora blattae CBS 6284]
Length = 242
Score = 271 bits (693), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL C+LDLK +ALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 65 IVPTLQNIVATVNLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 124
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QKIGF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 125 VTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTF 184
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 185 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEF 239
>gi|255719850|ref|XP_002556205.1| KLTH0H07502p [Lachancea thermotolerans]
gi|238942171|emb|CAR30343.1| KLTH0H07502p [Lachancea thermotolerans CBS 6340]
Length = 230
Score = 271 bits (693), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK +ALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 53 IVPTLQNIVATVNLDCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 112
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
GAKSE +KLA+RKYARI+QKIGF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 113 VIGAKSEDDSKLASRKYARIIQKIGFSAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTF 172
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 173 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEF 227
>gi|403216725|emb|CCK71221.1| hypothetical protein KNAG_0G01630 [Kazachstania naganishii CBS
8797]
Length = 255
Score = 271 bits (693), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL C+LDLK +ALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 78 IVPTLQNIVATVNLGCRLDLKTVALHARNAEYNPRRFAAVIMRIREPKTTALIFASGKMV 137
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QKIGF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 138 VTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTF 197
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 198 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEF 252
>gi|194670970|ref|XP_871896.3| PREDICTED: TATA box binding protein like 2 [Bos taurus]
Length = 377
Score = 271 bits (693), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 125/172 (72%), Positives = 146/172 (84%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLKKIALHA+NAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 200 IVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 259
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DF IQN+V SCDV FPI LE L H F
Sbjct: 260 CTGAKSEEQSRLAARKYARVVQKLGFPARFLDFTIQNMVASCDVRFPISLEGLVLTHQQF 319
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R IY AF NIYP+L
Sbjct: 320 SSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKKRSDIYEAFENIYPIL 371
>gi|207345821|gb|EDZ72518.1| YER148Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 240
Score = 271 bits (693), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+ L C+LDLK +ALHARNAEYNPSRF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 63 IVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPSRFAAVIMRIREPKTTALIFASGKMV 122
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QKIGF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 123 VTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTF 182
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 183 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEF 237
>gi|402225771|gb|EJU05832.1| TBP-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 235
Score = 271 bits (693), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 58 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 117
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE ++LA+RKYARIVQK+GF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 118 VTGAKSEDDSRLASRKYARIVQKLGFDTRFVDFKIQNIVGSCDVKFPIRLEGLAYSHGQF 177
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP V +LIF+SGK+V+TGAK RE+IY AFN IY VL +
Sbjct: 178 SSYEPELFPGLIYRMLKPKVVLLIFVSGKIVLTGAKVREEIYTAFNTIYTVLQEF 232
>gi|336276668|ref|XP_003353087.1| hypothetical protein SMAC_03405 [Sordaria macrospora k-hell]
gi|380092572|emb|CCC09849.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 257
Score = 271 bits (693), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
M P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 80 MTPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 139
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 140 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASKHHNF 199
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL +
Sbjct: 200 SSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDF 254
>gi|135634|sp|P26354.1|TBP_ACACA RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; Short=TBP; AltName:
Full=TATA-binding factor; AltName: Full=TATA-box factor;
AltName: Full=Transcription initiation factor TFIID TBP
subunit
gi|5593|emb|CAA44843.1| TFIID [Acanthamoeba castellanii]
gi|155636|gb|AAA27712.1| transcription factor [Acanthamoeba castellanii]
gi|155638|gb|AAA27713.1| TFIID [Acanthamoeba castellanii]
gi|440795312|gb|ELR16441.1| TATAbox-binding protein [Acanthamoeba castellanii str. Neff]
Length = 258
Score = 271 bits (693), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 148/175 (84%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 81 IVPTLQNIVSTVNLGCKLDLKNIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 140
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE ++LAARKYARI+QK+GF +F DFKIQNIVGSCDV FPI+LE L H +
Sbjct: 141 CTGAKSEEASRLAARKYARIIQKLGFAAKFLDFKIQNIVGSCDVRFPIRLEGLAFAHNHY 200
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
+YEPELFPGLIYRM +P + +LIF+SGK+V+TGAK RE+IY AF NIYPVL Y
Sbjct: 201 CSYEPELFPGLIYRMVQPKIVLLIFVSGKIVLTGAKVREEIYEAFENIYPVLTEY 255
>gi|291403917|ref|XP_002718356.1| PREDICTED: TATA box binding protein like 2-like [Oryctolagus
cuniculus]
Length = 345
Score = 271 bits (693), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 126/173 (72%), Positives = 150/173 (86%), Gaps = 1/173 (0%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLKKIALHA+NAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 167 IVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 226
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+G+P +F DFKIQN+VGSCDV FPI+LE L H F
Sbjct: 227 CTGAKSEEQSRLAARKYARVVQKLGYPARFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQF 286
Query: 121 -STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L
Sbjct: 287 SSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPIL 339
>gi|367010504|ref|XP_003679753.1| hypothetical protein TDEL_0B04130 [Torulaspora delbrueckii]
gi|359747411|emb|CCE90542.1| hypothetical protein TDEL_0B04130 [Torulaspora delbrueckii]
Length = 235
Score = 271 bits (692), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL C+LDLK +ALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 58 IVPTLQNIVATVNLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 117
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QKIGF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 118 VTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTF 177
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +L+F+SGKVV+TGAK RE+IY AF IYPVL+ +
Sbjct: 178 SSYEPELFPGLIYRMVKPKIVLLVFVSGKVVLTGAKQREEIYQAFEAIYPVLSEF 232
>gi|50290217|ref|XP_447540.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526850|emb|CAG60477.1| unnamed protein product [Candida glabrata]
Length = 233
Score = 271 bits (692), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL C+LDLK +ALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 56 IVPTLQNIVATVNLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 115
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QKIGF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 116 VTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTF 175
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 176 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEF 230
>gi|255936921|ref|XP_002559487.1| Pc13g10670 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584107|emb|CAP92136.1| Pc13g10670 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 265
Score = 271 bits (692), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 124/173 (71%), Positives = 149/173 (86%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V T
Sbjct: 90 PTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVT 149
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H FS+
Sbjct: 150 GAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNFSS 209
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 210 YEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSDF 262
>gi|365987133|ref|XP_003670398.1| hypothetical protein NDAI_0E03380 [Naumovozyma dairenensis CBS 421]
gi|343769168|emb|CCD25155.1| hypothetical protein NDAI_0E03380 [Naumovozyma dairenensis CBS 421]
Length = 264
Score = 271 bits (692), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL C+LDLK +ALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 87 IVPTLQNIVATVNLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 146
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QKIGF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 147 VTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTF 206
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 207 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEF 261
>gi|425767263|gb|EKV05837.1| RNA polymerase I and III transcription factor complex component
Tbp, putative [Penicillium digitatum PHI26]
gi|425780061|gb|EKV18083.1| RNA polymerase I and III transcription factor complex component
Tbp, putative [Penicillium digitatum Pd1]
Length = 263
Score = 271 bits (692), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 124/173 (71%), Positives = 149/173 (86%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V T
Sbjct: 88 PTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVT 147
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H FS+
Sbjct: 148 GAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNFSS 207
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 208 YEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSDF 260
>gi|226088558|dbj|BAH37024.1| TATA-box binding protein [Oryzias latipes]
Length = 305
Score = 271 bits (692), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 125/172 (72%), Positives = 148/172 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 127 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 186
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F D KIQN+VGSCDV+FPI+LE L H F
Sbjct: 187 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDLKIQNMVGSCDVKFPIRLEGLVLTHQQF 246
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L
Sbjct: 247 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPIL 298
>gi|146415198|ref|XP_001483569.1| TATA-box binding protein [Meyerozyma guilliermondii ATCC 6260]
gi|146392042|gb|EDK40200.1| TATA-box binding protein [Meyerozyma guilliermondii ATCC 6260]
Length = 240
Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 63 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 122
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 123 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTF 182
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SG++V+TGAK RE+IY AF IYPVL+ +
Sbjct: 183 SSYEPELFPGLIYRMVKPKIVLLIFVSGRIVLTGAKQREEIYDAFEAIYPVLSEF 237
>gi|295670940|ref|XP_002796017.1| TATA-box-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284150|gb|EEH39716.1| TATA-box-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 265
Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 88 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 147
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 148 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNF 207
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL +
Sbjct: 208 SSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLTDF 262
>gi|315055559|ref|XP_003177154.1| TATA-box-binding protein [Arthroderma gypseum CBS 118893]
gi|311339000|gb|EFQ98202.1| TATA-box-binding protein [Arthroderma gypseum CBS 118893]
Length = 257
Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 80 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 139
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 140 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNF 199
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL +
Sbjct: 200 SSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLTDF 254
>gi|2897847|gb|AAC03409.1| transcription factor IID [Homo sapiens]
Length = 339
Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL RNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 161 IVPQLQNIVSTVNLGCKLDLKTIALRRRNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 220
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 221 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 280
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 281 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 335
>gi|225681638|gb|EEH19922.1| TATA-box-binding protein [Paracoccidioides brasiliensis Pb03]
gi|226288778|gb|EEH44290.1| TATA-box-binding protein [Paracoccidioides brasiliensis Pb18]
Length = 265
Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 88 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 147
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 148 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNF 207
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL +
Sbjct: 208 SSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLTDF 262
>gi|195122370|ref|XP_002005684.1| GI18943 [Drosophila mojavensis]
gi|193910752|gb|EDW09619.1| GI18943 [Drosophila mojavensis]
Length = 348
Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 123/173 (71%), Positives = 151/173 (87%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLK+IALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 172 PQLQNIVSTVNLCCKLDLKRIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 231
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++LAARKYARI+QK+GFP +F DFKIQN+VGSCDV+FPI+LE L H FS+
Sbjct: 232 GAKSEDDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHCNFSS 291
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM +P + +LIF+SGKVV+TGAK R++IY AF+ I+P+L +
Sbjct: 292 YEPELFPGLIYRMVRPRIVLLIFVSGKVVLTGAKVRQEIYDAFDKIFPILKKF 344
>gi|296824240|ref|XP_002850621.1| TATA-box-binding protein [Arthroderma otae CBS 113480]
gi|238838175|gb|EEQ27837.1| TATA-box-binding protein [Arthroderma otae CBS 113480]
Length = 266
Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 89 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 148
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 149 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNF 208
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL +
Sbjct: 209 SSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLTDF 263
>gi|54696182|gb|AAV38463.1| TATA box binding protein [Homo sapiens]
Length = 336
Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 158 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 217
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE H F
Sbjct: 218 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGPVLTHQQF 277
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 278 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 332
>gi|358368366|dbj|GAA84983.1| TATA-box binding protein [Aspergillus kawachii IFO 4308]
Length = 262
Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 124/173 (71%), Positives = 149/173 (86%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V T
Sbjct: 87 PTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVT 146
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H FS+
Sbjct: 147 GAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNFSS 206
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 207 YEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSDF 259
>gi|407927098|gb|EKG20002.1| TATA-box binding protein [Macrophomina phaseolina MS6]
Length = 250
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 73 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 132
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 133 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNF 192
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 193 SSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSDF 247
>gi|3122921|sp|O17488.1|TBP_ARTSF RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; Short=TBP; AltName:
Full=TATA-binding factor; AltName: Full=TATA-box factor;
AltName: Full=Transcription initiation factor TFIID TBP
subunit
gi|2623958|emb|CAA05488.1| TATA-binding protein [Artemia franciscana]
Length = 275
Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 125/170 (73%), Positives = 149/170 (87%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
PV++NIV+T+NL C+LDLKKIAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 101 PVLENIVSTVNLGCRLDLKKIALQARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 160
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++LAARKYARIVQK+GF +F DFKIQN+VGSCDV+FPI+LE L H FS+
Sbjct: 161 GAKSEEDSRLAARKYARIVQKLGFSAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQFSS 220
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R++IY AF NIYP+L
Sbjct: 221 YEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYDAFENIYPIL 270
>gi|171681966|ref|XP_001905926.1| hypothetical protein [Podospora anserina S mat+]
gi|170940942|emb|CAP66592.1| unnamed protein product [Podospora anserina S mat+]
Length = 255
Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 78 ITPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 137
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 138 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASKHHNF 197
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL +
Sbjct: 198 SSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDF 252
>gi|169854094|ref|XP_001833724.1| transcription initiation factor TFIID-1 [Coprinopsis cinerea
okayama7#130]
gi|116505191|gb|EAU88086.1| transcription initiation factor TFIID-1 [Coprinopsis cinerea
okayama7#130]
Length = 308
Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 125/172 (72%), Positives = 148/172 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 131 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 190
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE ++LA+RKYARIVQK+GF +F +FKIQNIVGSCDV+FPI+LE L H F
Sbjct: 191 VTGAKSEDDSRLASRKYARIVQKLGFDAKFSEFKIQNIVGSCDVKFPIRLEGLAYSHGQF 250
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP V +LIF+SGK+V+TGAK RE+IY AFN IY VL
Sbjct: 251 SSYEPELFPGLIYRMIKPKVVLLIFVSGKIVLTGAKVREEIYTAFNTIYTVL 302
>gi|392573053|gb|EIW66195.1| hypothetical protein TREMEDRAFT_41045 [Tremella mesenterica DSM
1558]
Length = 255
Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NLEC+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 74 LVPTLQNIVATVNLECRLDLKTIALHARNAEYNPKRFAAVVMRIREPKTTALIFASGKMV 133
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE ++LA+RKYARI+QK+GF +F +FKIQNIVGSCDV+FPI+LE L H F
Sbjct: 134 VTGAKSEDDSRLASRKYARIIQKLGFDAKFAEFKIQNIVGSCDVKFPIRLEGLAYSHGAF 193
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP V +LIF+SGK+V+TGAK RE+IY AFN IY VL +
Sbjct: 194 SSYEPELFPGLIYRMLKPKVVLLIFVSGKIVLTGAKVREEIYMAFNQIYAVLTEF 248
>gi|317036144|ref|XP_001397705.2| TATA-box-binding protein [Aspergillus niger CBS 513.88]
Length = 262
Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 124/173 (71%), Positives = 149/173 (86%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V T
Sbjct: 87 PTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVT 146
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H FS+
Sbjct: 147 GAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNFSS 206
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 207 YEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSDF 259
>gi|303317340|ref|XP_003068672.1| TATA-box-binding protein, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240108353|gb|EER26527.1| TATA-box-binding protein, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320038620|gb|EFW20555.1| TATA-box binding protein [Coccidioides posadasii str. Silveira]
Length = 252
Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 124/173 (71%), Positives = 148/173 (85%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V T
Sbjct: 77 PTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVT 136
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H FS+
Sbjct: 137 GAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNFSS 196
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL +
Sbjct: 197 YEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLTDF 249
>gi|261194208|ref|XP_002623509.1| transcription initiation factor TFIID-2 [Ajellomyces dermatitidis
SLH14081]
gi|239588523|gb|EEQ71166.1| transcription initiation factor TFIID-2 [Ajellomyces dermatitidis
SLH14081]
gi|239606906|gb|EEQ83893.1| transcription initiation factor TFIID-2 [Ajellomyces dermatitidis
ER-3]
gi|327351372|gb|EGE80229.1| hypothetical protein BDDG_03170 [Ajellomyces dermatitidis ATCC
18188]
Length = 262
Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 124/170 (72%), Positives = 147/170 (86%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V T
Sbjct: 87 PTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVT 146
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H FS+
Sbjct: 147 GAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNFSS 206
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL
Sbjct: 207 YEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVL 256
>gi|169770491|ref|XP_001819715.1| TATA-box-binding protein [Aspergillus oryzae RIB40]
gi|238487092|ref|XP_002374784.1| transcription factor TFIID [Aspergillus flavus NRRL3357]
gi|83767574|dbj|BAE57713.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220699663|gb|EED56002.1| transcription factor TFIID [Aspergillus flavus NRRL3357]
gi|391867294|gb|EIT76540.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Aspergillus oryzae 3.042]
Length = 263
Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 86 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 145
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 146 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNF 205
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 206 SSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSDF 260
>gi|345560531|gb|EGX43656.1| hypothetical protein AOL_s00215g392 [Arthrobotrys oligospora ATCC
24927]
Length = 257
Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 80 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 139
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 140 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHHF 199
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 200 SSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLSDF 254
>gi|225556591|gb|EEH04879.1| transcription initiation factor TFIID-2 [Ajellomyces capsulatus
G186AR]
gi|240273705|gb|EER37225.1| TATA-binding protein [Ajellomyces capsulatus H143]
gi|325087599|gb|EGC40909.1| transcription initiation factor TFIID-2 [Ajellomyces capsulatus
H88]
Length = 262
Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 85 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 144
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 145 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNF 204
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL +
Sbjct: 205 SSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLTDF 259
>gi|3122925|sp|Q12731.1|TBP_EMENI RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; Short=TBP; AltName:
Full=TATA-binding factor; AltName: Full=TATA-box factor;
AltName: Full=Transcription initiation factor TFIID TBP
subunit
gi|887878|gb|AAB57874.1| TATA-box binding protein [Emericella nidulans]
gi|887880|gb|AAB57876.1| TATA-box binding protein [Emericella nidulans]
Length = 268
Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 124/173 (71%), Positives = 149/173 (86%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V T
Sbjct: 93 PTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVT 152
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H FS+
Sbjct: 153 GAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNFSS 212
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 213 YEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSDF 265
>gi|119491905|ref|XP_001263447.1| RNA polymerase I and III transcription factor complex component
Tbp, putative [Neosartorya fischeri NRRL 181]
gi|119411607|gb|EAW21550.1| RNA polymerase I and III transcription factor complex component
Tbp, putative [Neosartorya fischeri NRRL 181]
Length = 264
Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 87 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 146
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 147 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNF 206
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 207 SSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSDF 261
>gi|115396162|ref|XP_001213720.1| TATA-box binding protein [Aspergillus terreus NIH2624]
gi|114193289|gb|EAU34989.1| TATA-box binding protein [Aspergillus terreus NIH2624]
Length = 263
Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 124/173 (71%), Positives = 149/173 (86%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V T
Sbjct: 88 PTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVT 147
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H FS+
Sbjct: 148 GAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNFSS 207
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 208 YEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSDF 260
>gi|326471025|gb|EGD95034.1| TATA-box-binding protein [Trichophyton tonsurans CBS 112818]
Length = 257
Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 80 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 139
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 140 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNF 199
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL +
Sbjct: 200 SSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLTDF 254
>gi|348168341|gb|AEP68421.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168347|gb|AEP68424.1| TATA-binding protein [Saccharomyces cerevisiae]
Length = 240
Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 148/175 (84%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+ L C+LDLK +ALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 63 IVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 122
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QKIGF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 123 VTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTF 182
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 183 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEF 237
>gi|212526960|ref|XP_002143637.1| RNA polymerase I and III transcription factor complex component
Tbp, putative [Talaromyces marneffei ATCC 18224]
gi|212526962|ref|XP_002143638.1| RNA polymerase I and III transcription factor complex component
Tbp, putative [Talaromyces marneffei ATCC 18224]
gi|212526964|ref|XP_002143639.1| RNA polymerase I and III transcription factor complex component
Tbp, putative [Talaromyces marneffei ATCC 18224]
gi|62956011|gb|AAY23352.1| TATA-binding protein [Talaromyces marneffei]
gi|62956013|gb|AAY23353.1| TATA-binding protein [Talaromyces marneffei]
gi|210073035|gb|EEA27122.1| RNA polymerase I and III transcription factor complex component
Tbp, putative [Talaromyces marneffei ATCC 18224]
gi|210073036|gb|EEA27123.1| RNA polymerase I and III transcription factor complex component
Tbp, putative [Talaromyces marneffei ATCC 18224]
gi|210073037|gb|EEA27124.1| RNA polymerase I and III transcription factor complex component
Tbp, putative [Talaromyces marneffei ATCC 18224]
Length = 255
Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 78 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 137
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 138 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNF 197
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 198 SSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSDF 252
>gi|134083254|emb|CAK46825.1| unnamed protein product [Aspergillus niger]
gi|350633630|gb|EHA21995.1| hypothetical protein ASPNIDRAFT_210581 [Aspergillus niger ATCC
1015]
Length = 282
Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 124/171 (72%), Positives = 148/171 (86%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V T
Sbjct: 87 PTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVT 146
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H FS+
Sbjct: 147 GAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNFSS 206
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+
Sbjct: 207 YEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLS 257
>gi|366997981|ref|XP_003683727.1| hypothetical protein TPHA_0A02110 [Tetrapisispora phaffii CBS 4417]
gi|357522022|emb|CCE61293.1| hypothetical protein TPHA_0A02110 [Tetrapisispora phaffii CBS 4417]
Length = 244
Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 123/175 (70%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL C+LDLK +ALHARNAE+NP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 67 IVPTLQNIVATVNLGCRLDLKTVALHARNAEFNPKRFAAVIMRIREPKTTALIFASGKMV 126
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QKIGF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 127 VTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTF 186
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +L+F+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 187 SSYEPELFPGLIYRMVKPKIVLLVFVSGKIVLTGAKQREEIYQAFEAIYPVLSEF 241
>gi|242782217|ref|XP_002479956.1| RNA polymerase I and III transcription factor complex component
Tbp, putative [Talaromyces stipitatus ATCC 10500]
gi|242782222|ref|XP_002479957.1| RNA polymerase I and III transcription factor complex component
Tbp, putative [Talaromyces stipitatus ATCC 10500]
gi|218720103|gb|EED19522.1| RNA polymerase I and III transcription factor complex component
Tbp, putative [Talaromyces stipitatus ATCC 10500]
gi|218720104|gb|EED19523.1| RNA polymerase I and III transcription factor complex component
Tbp, putative [Talaromyces stipitatus ATCC 10500]
Length = 255
Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 78 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 137
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 138 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNF 197
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 198 SSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSDF 252
>gi|346974478|gb|EGY17930.1| TATA-box-binding protein [Verticillium dahliae VdLs.17]
Length = 249
Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 72 LTPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 131
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 132 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNF 191
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL +
Sbjct: 192 SSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDF 246
>gi|170093960|ref|XP_001878201.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646655|gb|EDR10900.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 189
Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 125/172 (72%), Positives = 148/172 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 12 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 71
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE ++LA+RKYARIVQK+GF +F +FKIQNIVGSCDV+FPI+LE L H F
Sbjct: 72 VTGAKSEDDSRLASRKYARIVQKLGFDAKFSEFKIQNIVGSCDVKFPIRLEGLAYSHGQF 131
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP V +LIF+SGK+V+TGAK RE+IY AFN IY VL
Sbjct: 132 SSYEPELFPGLIYRMIKPKVVLLIFVSGKIVLTGAKVREEIYTAFNTIYTVL 183
>gi|156053057|ref|XP_001592455.1| TATA-box binding protein [Sclerotinia sclerotiorum 1980]
gi|154704474|gb|EDO04213.1| TATA-box binding protein [Sclerotinia sclerotiorum 1980 UF-70]
Length = 251
Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 123/175 (70%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI++PKTTALIF+SGK+V
Sbjct: 74 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMV 133
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 134 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHMNF 193
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL +
Sbjct: 194 SSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDF 248
>gi|340939166|gb|EGS19788.1| putative tata-box binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 255
Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 78 ITPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 137
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 138 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASKHHNF 197
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL +
Sbjct: 198 SSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDF 252
>gi|70999782|ref|XP_754608.1| RNA polymerase I and III transcription factor complex component Tbp
[Aspergillus fumigatus Af293]
gi|66852245|gb|EAL92570.1| RNA polymerase I and III transcription factor complex component
Tbp, putative [Aspergillus fumigatus Af293]
gi|159127621|gb|EDP52736.1| RNA polymerase I and III transcription factor complex component
Tbp, putative [Aspergillus fumigatus A1163]
Length = 283
Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 125/176 (71%), Positives = 150/176 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 87 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 146
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 147 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNF 206
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYV 176
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ V
Sbjct: 207 SSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSGTV 262
>gi|393238580|gb|EJD46116.1| TBP-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 305
Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 126/172 (73%), Positives = 149/172 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 128 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 187
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE ++LA+RKYARIVQK+GF +F +FKIQNIVGSCDV+FPI+LE L H F
Sbjct: 188 VTGAKSEDDSRLASRKYARIVQKLGFDAKFSEFKIQNIVGSCDVKFPIRLEGLAYSHGQF 247
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP V +LIF+SGK+V+TGAK RE+IYAAFN IY VL
Sbjct: 248 SSYEPELFPGLIYRMLKPKVVLLIFVSGKIVLTGAKVREEIYAAFNTIYTVL 299
>gi|390598615|gb|EIN08013.1| TATA-box binding protein, partial [Punctularia strigosozonata
HHB-11173 SS5]
Length = 189
Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 125/172 (72%), Positives = 149/172 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI++PKTTALIF+SGK+V
Sbjct: 12 IVPQLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMV 71
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE ++LAARKYARI+QK+GF +F +FKIQNIVGSCDV+FPI+LE L H F
Sbjct: 72 VTGAKSEDDSRLAARKYARIIQKLGFDAKFSEFKIQNIVGSCDVKFPIRLEGLAYSHGQF 131
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP V +LIF+SGK+V+TGAK RE+IYAAFN IY VL
Sbjct: 132 SSYEPELFPGLIYRMLKPKVVLLIFVSGKIVLTGAKVREEIYAAFNTIYTVL 183
>gi|310798673|gb|EFQ33566.1| transcription factor TFIID [Glomerella graminicola M1.001]
Length = 256
Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 79 LTPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 138
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 139 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNF 198
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL +
Sbjct: 199 SSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDF 253
>gi|380491274|emb|CCF35436.1| TATA-box-binding protein [Colletotrichum higginsianum]
Length = 304
Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 124/172 (72%), Positives = 148/172 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 81 LTPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 140
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 141 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNF 200
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL
Sbjct: 201 SSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVL 252
>gi|361131465|gb|EHL03148.1| putative TATA-box-binding protein [Glarea lozoyensis 74030]
Length = 255
Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 78 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 137
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 138 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNF 197
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL +
Sbjct: 198 SSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDF 252
>gi|164429967|gb|ABY55311.1| TATA-binding protein 1 [Gallus gallus]
Length = 302
Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEY+P RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 124 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYDPKRFAAVIMRIREPRTTALIFSSGKMV 183
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+V+K+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 184 CTGAKSEEQSRLAARKYARVVRKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 243
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 244 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 298
>gi|259482151|tpe|CBF76358.1| TPA: TATA-box-binding protein (TATA-box factor)(TATA-binding
factor)(TATA sequence-binding
protein)(TBP)(Transcription initiation factor TFIID TBP
subunit) [Source:UniProtKB/Swiss-Prot;Acc:Q12731]
[Aspergillus nidulans FGSC A4]
Length = 284
Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 126/178 (70%), Positives = 152/178 (85%), Gaps = 1/178 (0%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V T
Sbjct: 93 PTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVT 152
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H FS+
Sbjct: 153 GAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNFSS 212
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYV-TYD 179
YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ + T+D
Sbjct: 213 YEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSGKLPTFD 270
>gi|392870835|gb|EAS32669.2| TATA-box-binding protein [Coccidioides immitis RS]
Length = 299
Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 122 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 181
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 182 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNF 241
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL +
Sbjct: 242 SSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLTDF 296
>gi|322711070|gb|EFZ02644.1| TATA binding protein [Metarhizium anisopliae ARSEF 23]
Length = 253
Score = 269 bits (688), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 76 ITPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 135
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 136 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNF 195
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL +
Sbjct: 196 SSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDF 250
>gi|401886560|gb|EJT50588.1| TATA-box binding protein (Transcription initiation factor TFIID TBP
subunit) [Trichosporon asahii var. asahii CBS 2479]
gi|406698490|gb|EKD01726.1| TATA-box binding protein (Transcription initiation factor TFIID TBP
subunit) [Trichosporon asahii var. asahii CBS 8904]
Length = 231
Score = 269 bits (688), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 125/172 (72%), Positives = 148/172 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ PV+QNIVAT+NLEC+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 53 LVPVLQNIVATVNLECRLDLKTIALHARNAEYNPKRFAAVVMRIREPKTTALIFASGKMV 112
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE ++LA+RKYARI+QK+GF +F +FKIQNIVGSCDV+FPI+LE L H F
Sbjct: 113 VTGAKSEDDSRLASRKYARIIQKLGFDAKFAEFKIQNIVGSCDVKFPIRLEGLAFSHGAF 172
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP V +LIF+SGK+V+TGAK RE+IY AF IY VL
Sbjct: 173 SSYEPELFPGLIYRMLKPKVVLLIFVSGKIVLTGAKVREEIYMAFKQIYSVL 224
>gi|17298080|dbj|BAB78514.1| TATA-box binding protein [Ephydatia fluviatilis]
Length = 281
Score = 269 bits (688), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 123/170 (72%), Positives = 150/170 (88%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLKKIALHARNAEYNP RF+AV MRI++P+TTAL+FSSGK+VCT
Sbjct: 106 PQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIRDPRTTALVFSSGKMVCT 165
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++LAARKYARI+QK+GFP +F +FKIQN+VGSCDV+FPI+LE L H+ FS+
Sbjct: 166 GAKSEDLSRLAARKYARIIQKLGFPARFMEFKIQNMVGSCDVKFPIRLEGLVVQHSQFSS 225
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +I AF+NIYP+L
Sbjct: 226 YEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERTEIIEAFHNIYPIL 275
>gi|1942827|pdb|1CDW|A Chain A, Human Tbp Core Domain Complexed With Dna
Length = 179
Score = 269 bits (688), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 125/172 (72%), Positives = 148/172 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 3 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 62
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE ++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 63 CTGAKSEENSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 122
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L
Sbjct: 123 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPIL 174
>gi|348168231|gb|AEP68366.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168233|gb|AEP68367.1| TATA-binding protein [Saccharomyces cerevisiae]
Length = 240
Score = 269 bits (688), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 148/175 (84%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+ L C+LDLK +ALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 63 IVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 122
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QKIGF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 123 VTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTF 182
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 183 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEF 237
>gi|393220621|gb|EJD06107.1| TATA-box binding protein, partial [Fomitiporia mediterranea MF3/22]
Length = 189
Score = 269 bits (688), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 125/170 (73%), Positives = 147/170 (86%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V T
Sbjct: 14 PTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVT 73
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++LA+RKYARIVQK+GF +F +FKIQNIVGSCDV+FPI+LE L H FS+
Sbjct: 74 GAKSEDDSRLASRKYARIVQKLGFDAKFSEFKIQNIVGSCDVKFPIRLEGLAYSHGQFSS 133
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPELFPGLIYRM KP V +LIF+SGK+V+TGAK RE+IY AFN IY VL
Sbjct: 134 YEPELFPGLIYRMIKPKVVLLIFVSGKIVLTGAKVREEIYTAFNTIYTVL 183
>gi|389632499|ref|XP_003713902.1| TATA-box-binding protein [Magnaporthe oryzae 70-15]
gi|351646235|gb|EHA54095.1| TATA-box-binding protein [Magnaporthe oryzae 70-15]
gi|440473248|gb|ELQ42063.1| TATA-box-binding protein [Magnaporthe oryzae Y34]
gi|440480212|gb|ELQ60887.1| TATA-box-binding protein [Magnaporthe oryzae P131]
Length = 255
Score = 269 bits (688), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 78 LTPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 137
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 138 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNF 197
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL +
Sbjct: 198 SSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDF 252
>gi|172899|gb|AAA35146.1| tata-box factor protein [Saccharomyces cerevisiae]
Length = 240
Score = 269 bits (688), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 148/175 (84%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+ L C+LDLK +ALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 63 IVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 122
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QKIGF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 123 VTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTF 182
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 183 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEF 237
>gi|154318373|ref|XP_001558505.1| transcription initiation factor TFIID, TATA binding protein
[Botryotinia fuckeliana B05.10]
gi|347837614|emb|CCD52186.1| similar to transcription initiation factor TFIID [Botryotinia
fuckeliana]
Length = 251
Score = 269 bits (688), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 123/175 (70%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI++PKTTALIF+SGK+V
Sbjct: 74 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMV 133
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 134 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHMNF 193
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL +
Sbjct: 194 SSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDF 248
>gi|398364911|ref|NP_011075.3| Spt15p [Saccharomyces cerevisiae S288c]
gi|135643|sp|P13393.3|TBP_YEAST RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; Short=TBP; AltName:
Full=TATA-binding factor; AltName: Full=TATA-box factor;
AltName: Full=Transcription factor D; AltName:
Full=Transcription initiation factor TFIID TBP subunit
gi|73535263|pdb|1RM1|A Chain A, Structure Of A Yeast TfiiaTBPTATA-Box Dna Complex
gi|4610|emb|CAA34751.1| unnamed protein product [Saccharomyces cerevisiae]
gi|171132|gb|AAA34458.1| TATA box factor [Saccharomyces cerevisiae]
gi|172901|gb|AAA35147.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|603388|gb|AAB64675.1| Spt15p: TATA-box binding protein tfIId [Saccharomyces cerevisiae]
gi|151944866|gb|EDN63125.1| TBP [Saccharomyces cerevisiae YJM789]
gi|190405707|gb|EDV08974.1| TATA-box binding protein [Saccharomyces cerevisiae RM11-1a]
gi|256272072|gb|EEU07084.1| Spt15p [Saccharomyces cerevisiae JAY291]
gi|259146076|emb|CAY79336.1| Spt15p [Saccharomyces cerevisiae EC1118]
gi|285811781|tpg|DAA07809.1| TPA: Spt15p [Saccharomyces cerevisiae S288c]
gi|323309314|gb|EGA62532.1| Spt15p [Saccharomyces cerevisiae FostersO]
gi|323333807|gb|EGA75198.1| Spt15p [Saccharomyces cerevisiae AWRI796]
gi|323337848|gb|EGA79088.1| Spt15p [Saccharomyces cerevisiae Vin13]
gi|323348846|gb|EGA83084.1| Spt15p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355333|gb|EGA87158.1| Spt15p [Saccharomyces cerevisiae VL3]
gi|348168207|gb|AEP68354.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168209|gb|AEP68355.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168211|gb|AEP68356.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168213|gb|AEP68357.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168215|gb|AEP68358.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168217|gb|AEP68359.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168219|gb|AEP68360.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168221|gb|AEP68361.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168223|gb|AEP68362.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168225|gb|AEP68363.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168227|gb|AEP68364.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168229|gb|AEP68365.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168235|gb|AEP68368.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168237|gb|AEP68369.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168239|gb|AEP68370.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168241|gb|AEP68371.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168243|gb|AEP68372.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168245|gb|AEP68373.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168247|gb|AEP68374.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168249|gb|AEP68375.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168251|gb|AEP68376.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168253|gb|AEP68377.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168255|gb|AEP68378.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168257|gb|AEP68379.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168259|gb|AEP68380.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168261|gb|AEP68381.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168263|gb|AEP68382.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168265|gb|AEP68383.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168267|gb|AEP68384.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168269|gb|AEP68385.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168271|gb|AEP68386.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168273|gb|AEP68387.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168275|gb|AEP68388.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168277|gb|AEP68389.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168279|gb|AEP68390.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168281|gb|AEP68391.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168283|gb|AEP68392.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168285|gb|AEP68393.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168287|gb|AEP68394.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168289|gb|AEP68395.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168291|gb|AEP68396.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168293|gb|AEP68397.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168295|gb|AEP68398.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168297|gb|AEP68399.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168299|gb|AEP68400.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168301|gb|AEP68401.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168303|gb|AEP68402.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168305|gb|AEP68403.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168307|gb|AEP68404.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168309|gb|AEP68405.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168311|gb|AEP68406.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168313|gb|AEP68407.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168315|gb|AEP68408.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168317|gb|AEP68409.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168319|gb|AEP68410.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168321|gb|AEP68411.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168323|gb|AEP68412.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168325|gb|AEP68413.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168327|gb|AEP68414.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168329|gb|AEP68415.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168331|gb|AEP68416.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168333|gb|AEP68417.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168335|gb|AEP68418.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168337|gb|AEP68419.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168339|gb|AEP68420.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168343|gb|AEP68422.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168345|gb|AEP68423.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168349|gb|AEP68425.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168351|gb|AEP68426.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168353|gb|AEP68427.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168355|gb|AEP68428.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168357|gb|AEP68429.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168361|gb|AEP68431.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168363|gb|AEP68432.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168365|gb|AEP68433.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168367|gb|AEP68434.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168369|gb|AEP68435.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|348168371|gb|AEP68436.1| TATA-binding protein [Saccharomyces cerevisiae]
gi|349577810|dbj|GAA22978.1| K7_Spt15p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365765929|gb|EHN07432.1| Spt15p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299852|gb|EIW10944.1| Spt15p [Saccharomyces cerevisiae CEN.PK113-7D]
gi|226502|prf||1515352A transcription initiation factor TFIID
Length = 240
Score = 269 bits (688), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 148/175 (84%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+ L C+LDLK +ALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 63 IVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 122
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QKIGF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 123 VTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTF 182
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 183 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEF 237
>gi|342879468|gb|EGU80715.1| hypothetical protein FOXB_08755 [Fusarium oxysporum Fo5176]
Length = 254
Score = 269 bits (688), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 77 ITPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 136
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 137 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNF 196
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL +
Sbjct: 197 SSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDF 251
>gi|429859533|gb|ELA34313.1| RNA polymerase i and iii transcription factor complex component
[Colletotrichum gloeosporioides Nara gc5]
Length = 256
Score = 269 bits (688), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 79 LTPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 138
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 139 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNF 198
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL +
Sbjct: 199 SSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDF 253
>gi|402086781|gb|EJT81679.1| TATA-box-binding protein [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 255
Score = 269 bits (688), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 78 LTPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 137
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 138 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNF 197
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL +
Sbjct: 198 SSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDF 252
>gi|348168359|gb|AEP68430.1| TATA-binding protein [Saccharomyces cerevisiae]
Length = 240
Score = 269 bits (688), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 148/175 (84%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+ L C+LDLK +ALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 63 IVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 122
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QKIGF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 123 VTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTF 182
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 183 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEF 237
>gi|170674514|gb|ACB30147.1| TATA binding protein [Epichloe festucae]
Length = 256
Score = 269 bits (688), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 79 ITPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 138
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 139 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNF 198
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL +
Sbjct: 199 SSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDF 253
>gi|358386238|gb|EHK23834.1| hypothetical protein TRIVIDRAFT_89322 [Trichoderma virens Gv29-8]
Length = 253
Score = 269 bits (687), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 76 ITPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 135
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 136 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNF 195
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL +
Sbjct: 196 SSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDF 250
>gi|340517005|gb|EGR47251.1| TATA binding protein [Trichoderma reesei QM6a]
Length = 253
Score = 269 bits (687), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 76 ITPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 135
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 136 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNF 195
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL +
Sbjct: 196 SSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDF 250
>gi|440638539|gb|ELR08458.1| TATA-box-binding protein [Geomyces destructans 20631-21]
Length = 262
Score = 269 bits (687), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 85 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 144
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 145 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASKHHNF 204
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL +
Sbjct: 205 SSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDF 259
>gi|67537612|ref|XP_662580.1| TF22_MAIZE Transcription initiation factor TFIID-2 (TATA-box factor
2) (TATA sequence-binding protein 2) (TBP-2)
[Aspergillus nidulans FGSC A4]
gi|40741864|gb|EAA61054.1| TF22_MAIZE Transcription initiation factor TFIID-2 (TATA-box factor
2) (TATA sequence-binding protein 2) (TBP-2)
[Aspergillus nidulans FGSC A4]
Length = 211
Score = 269 bits (687), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 124/173 (71%), Positives = 149/173 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 18 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 77
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 78 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNF 137
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+
Sbjct: 138 SSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLS 190
>gi|392596142|gb|EIW85465.1| TBP-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 295
Score = 269 bits (687), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 124/172 (72%), Positives = 148/172 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI++PKTTALIF+SGK+V
Sbjct: 118 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMV 177
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE ++LA+RKYARIVQK+GF +F +FKIQNIVGSCDV+FPI+LE L H F
Sbjct: 178 VTGAKSEDDSRLASRKYARIVQKLGFDAKFSEFKIQNIVGSCDVKFPIRLEGLAYSHGQF 237
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP V +LIF+SGK+V+TGAK RE+IY AFN IY VL
Sbjct: 238 SSYEPELFPGLIYRMLKPKVVLLIFVSGKIVLTGAKVREEIYTAFNTIYTVL 289
>gi|409082748|gb|EKM83106.1| hypothetical protein AGABI1DRAFT_111611 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 306
Score = 269 bits (687), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 124/172 (72%), Positives = 148/172 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI++PKTTALIF+SGK+V
Sbjct: 129 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMV 188
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE ++LA+RKYARIVQK+GF +F +FKIQNIVGSCDV+FPI+LE L H F
Sbjct: 189 VTGAKSEDDSRLASRKYARIVQKLGFDAKFSEFKIQNIVGSCDVKFPIRLEGLAYSHGQF 248
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP V +LIF+SGK+V+TGAK RE+IY AFN IY VL
Sbjct: 249 SSYEPELFPGLIYRMIKPKVVLLIFVSGKIVLTGAKVREEIYTAFNTIYTVL 300
>gi|358394886|gb|EHK44279.1| hypothetical protein TRIATDRAFT_300545 [Trichoderma atroviride IMI
206040]
Length = 253
Score = 269 bits (687), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 76 ITPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 135
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 136 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNF 195
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL +
Sbjct: 196 SSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDF 250
>gi|408395610|gb|EKJ74788.1| hypothetical protein FPSE_05036 [Fusarium pseudograminearum CS3096]
Length = 254
Score = 269 bits (687), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 77 ITPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 136
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 137 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNF 196
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL +
Sbjct: 197 SSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDF 251
>gi|401625996|gb|EJS43965.1| spt15p [Saccharomyces arboricola H-6]
Length = 240
Score = 269 bits (687), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 148/175 (84%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+ L C+LDLK +ALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 63 IVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPRRFAAVIMRIREPKTTALIFASGKMV 122
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QKIGF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 123 VTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTF 182
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 183 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEF 237
>gi|33323635|gb|AAQ07596.1|AF503449_1 TATA-binding protein [Danio rerio]
Length = 302
Score = 269 bits (687), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 124 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 183
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 184 GTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 243
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 244 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRGEIYEAFENIYPILKGF 298
>gi|367040469|ref|XP_003650615.1| hypothetical protein THITE_2110255 [Thielavia terrestris NRRL 8126]
gi|346997876|gb|AEO64279.1| hypothetical protein THITE_2110255 [Thielavia terrestris NRRL 8126]
Length = 256
Score = 269 bits (687), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 79 ITPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 138
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 139 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASKHHNF 198
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL +
Sbjct: 199 SSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDF 253
>gi|365761010|gb|EHN02687.1| Spt15p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401842615|gb|EJT44751.1| SPT15-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 240
Score = 269 bits (687), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 148/175 (84%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+ L C+LDLK +ALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 63 IVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPRRFAAVIMRIREPKTTALIFASGKMV 122
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QKIGF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 123 VTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTF 182
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 183 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEF 237
>gi|367029935|ref|XP_003664251.1| hypothetical protein MYCTH_2306864 [Myceliophthora thermophila ATCC
42464]
gi|347011521|gb|AEO59006.1| hypothetical protein MYCTH_2306864 [Myceliophthora thermophila ATCC
42464]
Length = 257
Score = 268 bits (686), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 80 ITPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 139
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 140 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASKHHNF 199
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL +
Sbjct: 200 SSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDF 254
>gi|378727024|gb|EHY53483.1| TATA-box-binding protein [Exophiala dermatitidis NIH/UT8656]
Length = 268
Score = 268 bits (686), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 123/173 (71%), Positives = 148/173 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 83 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 142
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 143 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASKHHPF 202
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYP L+
Sbjct: 203 SSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEQIYPTLS 255
>gi|395535316|ref|XP_003769674.1| PREDICTED: TATA-box-binding protein [Sarcophilus harrisii]
Length = 309
Score = 268 bits (686), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 126/176 (71%), Positives = 150/176 (85%), Gaps = 1/176 (0%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 130 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 189
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 190 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 249
Query: 121 -STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 250 SSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 305
>gi|159465587|ref|XP_001691004.1| global transcription factor [Chlamydomonas reinhardtii]
gi|158279690|gb|EDP05450.1| global transcription factor [Chlamydomonas reinhardtii]
Length = 325
Score = 268 bits (686), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 123/177 (69%), Positives = 151/177 (85%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QN+VAT+NL KLDLK+IA+HARNAEYNP RF+AV MRI+EPKTTALIF+SGK+VCT
Sbjct: 31 PQLQNVVATVNLGTKLDLKEIAMHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 90
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++ AAR+YA+IVQK+GFP FK+FKIQNIVGSCDV+FPI+LE L H++F++
Sbjct: 91 GAKSEDDSRTAARRYAKIVQKLGFPATFKEFKIQNIVGSCDVKFPIRLEGLAYAHSLFAS 150
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYD 179
YEPELFPGLIYRMK+P + +LIF+SGKVV+TGAK R +IY A+ NIYP L Y D
Sbjct: 151 YEPELFPGLIYRMKQPKIVLLIFVSGKVVLTGAKTRGEIYQAYMNIYPTLIQYKKGD 207
>gi|388580273|gb|EIM20589.1| TBP-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 238
Score = 268 bits (686), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI++PKTTALIF+SGK+V
Sbjct: 61 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMV 120
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F +FKIQNIVGSCDV+FPI+LE L H F
Sbjct: 121 VTGAKSEDDSKLASRKYARIIQKLGFDAKFSEFKIQNIVGSCDVKFPIRLEGLAYTHGHF 180
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP V +LIF+SGK+V+TGAK RE+IY AFNNIY L Y
Sbjct: 181 SSYEPELFPGLIYRMVKPKVVLLIFVSGKIVLTGAKVREEIYTAFNNIYATLLDY 235
>gi|999660|pdb|1YTB|A Chain A, Crystal Structure Of A Yeast TbpTATA-Box Complex
gi|999661|pdb|1YTB|B Chain B, Crystal Structure Of A Yeast TbpTATA-Box Complex
gi|1633307|pdb|1YTF|A Chain A, Yeast TfiiaTBPDNA COMPLEX
gi|5822424|pdb|1TBA|B Chain B, Solution Structure Of A Tbp-Tafii230 Complex: Protein
Mimicry Of The Minor Groove Surface Of The Tata Box
Unwound By Tbp, Nmr, 25 Structures
gi|29726664|pdb|1NGM|A Chain A, Crystal Structure Of A Yeast Brf1-Tbp-Dna Ternary Complex
gi|29726668|pdb|1NGM|E Chain E, Crystal Structure Of A Yeast Brf1-Tbp-Dna Ternary Complex
gi|29726672|pdb|1NGM|I Chain I, Crystal Structure Of A Yeast Brf1-Tbp-Dna Ternary Complex
gi|29726676|pdb|1NGM|M Chain M, Crystal Structure Of A Yeast Brf1-Tbp-Dna Ternary Complex
gi|38492530|pdb|1NH2|A Chain A, Crystal Structure Of A Yeast TfiiaTBPDNA COMPLEX
Length = 180
Score = 268 bits (686), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 148/175 (84%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+ L C+LDLK +ALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 3 IVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 62
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QKIGF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 63 VTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTF 122
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 123 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEF 177
>gi|426200613|gb|EKV50537.1| hypothetical protein AGABI2DRAFT_44722, partial [Agaricus bisporus
var. bisporus H97]
Length = 189
Score = 268 bits (686), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 124/172 (72%), Positives = 148/172 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI++PKTTALIF+SGK+V
Sbjct: 12 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMV 71
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE ++LA+RKYARIVQK+GF +F +FKIQNIVGSCDV+FPI+LE L H F
Sbjct: 72 VTGAKSEDDSRLASRKYARIVQKLGFDAKFSEFKIQNIVGSCDVKFPIRLEGLAYSHGQF 131
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP V +LIF+SGK+V+TGAK RE+IY AFN IY VL
Sbjct: 132 SSYEPELFPGLIYRMIKPKVVLLIFVSGKIVLTGAKVREEIYTAFNTIYTVL 183
>gi|307109595|gb|EFN57833.1| hypothetical protein CHLNCDRAFT_20778 [Chlorella variabilis]
Length = 209
Score = 268 bits (686), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 122/175 (69%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QN+VAT+NLECKLDLK IALHARNAEYNP RF+AV MRI+EPK+TALIF SGK+V
Sbjct: 27 IVPQLQNVVATVNLECKLDLKNIALHARNAEYNPKRFAAVIMRIREPKSTALIFHSGKMV 86
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTG KSE +A++A+RKYA+I+QK+ + V FK+FKIQN+VGSCDV+FPI+LE L HA+F
Sbjct: 87 CTGTKSEQEARIASRKYAKILQKLQYSVSFKEFKIQNMVGSCDVKFPIRLEGLASTHAVF 146
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
+YEPELFPGLIYRM P + +LIF+SGKVV+TGAK RE IY AF NIYPVL +
Sbjct: 147 CSYEPELFPGLIYRMADPKIVLLIFVSGKVVLTGAKKREDIYRAFENIYPVLQTF 201
>gi|494632|pdb|1TBP|A Chain A, Crystal Structure Of Yeast Tata-Binding Protein And Model
For Interaction With Dna
gi|494633|pdb|1TBP|B Chain B, Crystal Structure Of Yeast Tata-Binding Protein And Model
For Interaction With Dna
Length = 180
Score = 268 bits (686), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 148/175 (84%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+ L C+LDLK +ALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 3 IVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 62
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QKIGF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 63 VTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTF 122
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 123 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEF 177
>gi|302693080|ref|XP_003036219.1| hypothetical protein SCHCODRAFT_81516 [Schizophyllum commune H4-8]
gi|300109915|gb|EFJ01317.1| hypothetical protein SCHCODRAFT_81516 [Schizophyllum commune H4-8]
Length = 286
Score = 268 bits (686), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 124/172 (72%), Positives = 147/172 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI++PKTTALIF+SGK+V
Sbjct: 109 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMV 168
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE ++LA+RKYARIVQK+GF +F +FKIQNIVGSCDV FPI+LE L H F
Sbjct: 169 VTGAKSEDDSRLASRKYARIVQKLGFDAKFSEFKIQNIVGSCDVRFPIRLEGLAYSHGQF 228
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP V +LIF+SGK+V+TGAK RE+IY AFN IY VL
Sbjct: 229 SSYEPELFPGLIYRMIKPKVVLLIFVSGKIVLTGAKVREEIYTAFNTIYTVL 280
>gi|154284482|ref|XP_001543036.1| TATA-box binding protein [Ajellomyces capsulatus NAm1]
gi|150406677|gb|EDN02218.1| TATA-box binding protein [Ajellomyces capsulatus NAm1]
Length = 268
Score = 268 bits (686), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 123/172 (71%), Positives = 148/172 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 85 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 144
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA++KYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 145 VTGAKSEDDSKLASKKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNF 204
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL
Sbjct: 205 SSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVL 256
>gi|406862826|gb|EKD15875.1| transcription initiation factor TFIID-2 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 264
Score = 268 bits (686), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 87 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 146
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 147 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNF 206
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL +
Sbjct: 207 SSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDF 261
>gi|540195|gb|AAA79368.1| TATA binding protein [Pneumocystis wakefieldiae]
Length = 229
Score = 268 bits (686), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 148/175 (84%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IAL RNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 51 IVPSLQNIVATVNLDCRLDLKTIALQRRNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 110
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 111 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAYSHGTF 170
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVLN +
Sbjct: 171 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVREEIYQAFEAIYPVLNEF 225
>gi|346323634|gb|EGX93232.1| TATA-box binding protein [Cordyceps militaris CM01]
Length = 264
Score = 268 bits (686), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 76 ITPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 135
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 136 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNF 195
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL +
Sbjct: 196 SSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDF 250
>gi|335309027|ref|XP_003361466.1| PREDICTED: TATA-box-binding protein [Sus scrofa]
Length = 326
Score = 268 bits (686), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 124/169 (73%), Positives = 147/169 (86%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
++ NIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCTG
Sbjct: 151 IVGNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTG 210
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
AKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H FS+Y
Sbjct: 211 AKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSY 270
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L
Sbjct: 271 EPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPIL 319
>gi|400597791|gb|EJP65515.1| transcription factor TFIID [Beauveria bassiana ARSEF 2860]
Length = 253
Score = 268 bits (686), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 76 ITPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 135
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 136 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNF 195
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL +
Sbjct: 196 SSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDF 250
>gi|302918240|ref|XP_003052617.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733557|gb|EEU46904.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 253
Score = 268 bits (686), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 76 ITPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 135
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 136 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNF 195
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL +
Sbjct: 196 SSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDF 250
>gi|384500347|gb|EIE90838.1| TATA-box-binding protein [Rhizopus delemar RA 99-880]
Length = 248
Score = 268 bits (685), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 125/172 (72%), Positives = 147/172 (85%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
V +NIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V TG
Sbjct: 74 VFRNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVTG 133
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
AKSE +KLAARKYARI+QK+GF +F DFKIQNIVGSCDV+FPI+LE L H FS+Y
Sbjct: 134 AKSEDDSKLAARKYARIIQKLGFQAKFTDFKIQNIVGSCDVKFPIRLEGLAYSHGHFSSY 193
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
EPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL +
Sbjct: 194 EPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVREEIYQAFQAIYPVLTEF 245
>gi|336367903|gb|EGN96247.1| hypothetical protein SERLA73DRAFT_76226 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380633|gb|EGO21786.1| hypothetical protein SERLADRAFT_410307 [Serpula lacrymans var.
lacrymans S7.9]
Length = 306
Score = 268 bits (685), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 124/172 (72%), Positives = 148/172 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI++PKTTALIF+SGK+V
Sbjct: 129 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMV 188
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE ++LA+RKYARIVQK+GF +F +FKIQNIVGSCDV+FPI+LE L H F
Sbjct: 189 VTGAKSEDDSRLASRKYARIVQKLGFDAKFSEFKIQNIVGSCDVKFPIRLEGLAYSHGQF 248
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP V +LIF+SGK+V+TGAK RE+IY AFN IY VL
Sbjct: 249 SSYEPELFPGLIYRMIKPKVVLLIFVSGKIVLTGAKVREEIYTAFNTIYTVL 300
>gi|55583664|gb|AAV53354.1| TATA-box binding protein [Volvox carteri f. nagariensis]
Length = 340
Score = 268 bits (685), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 123/179 (68%), Positives = 152/179 (84%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QN+VAT+NL KLDLK+IA+HARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 33 ITPQLQNVVATVNLGTKLDLKEIAMHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 92
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE ++ AAR+YA+IVQK+GFP FK+FKIQNIVGSCDV+FPI+LE L H++F
Sbjct: 93 CTGAKSEDDSRTAARRYAKIVQKLGFPATFKEFKIQNIVGSCDVKFPIRLEGLAYAHSLF 152
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYD 179
++YEPELFPGLIYRMK+P + +LIF+SGKVV+TGAK R +IY A+ NIYP L Y D
Sbjct: 153 ASYEPELFPGLIYRMKQPKIVLLIFVSGKVVLTGAKTRYEIYQAYMNIYPTLIQYKKGD 211
>gi|392567667|gb|EIW60842.1| TBP-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 308
Score = 268 bits (685), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 124/172 (72%), Positives = 148/172 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI++PKTTALIF+SGK+V
Sbjct: 131 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMV 190
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE ++LA+RKYARIVQK+GF +F +FKIQNIVGSCDV+FPI+LE L H F
Sbjct: 191 VTGAKSEDDSRLASRKYARIVQKLGFDAKFSEFKIQNIVGSCDVKFPIRLEGLAYSHGQF 250
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP V +LIF+SGK+V+TGAK RE+IY AFN IY VL
Sbjct: 251 SSYEPELFPGLIYRMIKPKVVLLIFVSGKIVLTGAKVREEIYTAFNTIYTVL 302
>gi|403418333|emb|CCM05033.1| predicted protein [Fibroporia radiculosa]
Length = 317
Score = 268 bits (685), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 124/172 (72%), Positives = 148/172 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI++PKTTALIF+SGK+V
Sbjct: 140 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMV 199
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE ++LA+RKYARIVQK+GF +F +FKIQNIVGSCDV+FPI+LE L H F
Sbjct: 200 VTGAKSEDDSRLASRKYARIVQKLGFDAKFSEFKIQNIVGSCDVKFPIRLEGLAYSHGQF 259
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP V +LIF+SGK+V+TGAK RE+IY AFN IY VL
Sbjct: 260 SSYEPELFPGLIYRMIKPKVVLLIFVSGKIVLTGAKVREEIYTAFNTIYTVL 311
>gi|302833409|ref|XP_002948268.1| TATA-box binding protein [Volvox carteri f. nagariensis]
gi|300266488|gb|EFJ50675.1| TATA-box binding protein [Volvox carteri f. nagariensis]
Length = 338
Score = 268 bits (685), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 123/179 (68%), Positives = 152/179 (84%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QN+VAT+NL KLDLK+IA+HARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 8 ITPQLQNVVATVNLGTKLDLKEIAMHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 67
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE ++ AAR+YA+IVQK+GFP FK+FKIQNIVGSCDV+FPI+LE L H++F
Sbjct: 68 CTGAKSEDDSRTAARRYAKIVQKLGFPATFKEFKIQNIVGSCDVKFPIRLEGLAYAHSLF 127
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYD 179
++YEPELFPGLIYRMK+P + +LIF+SGKVV+TGAK R +IY A+ NIYP L Y D
Sbjct: 128 ASYEPELFPGLIYRMKQPKIVLLIFVSGKVVLTGAKTRYEIYQAYMNIYPTLIQYKKGD 186
>gi|320591748|gb|EFX04187.1| RNA polymerase 1 and 3 transcription factor complex component
[Grosmannia clavigera kw1407]
Length = 265
Score = 268 bits (685), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 123/175 (70%), Positives = 147/175 (84%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 88 LTPTLQNIVATVNLACRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 147
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FP++LE L H F
Sbjct: 148 VTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPVRLEGLASRHHNF 207
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK V+TGAK RE+IY AF IYPVL +
Sbjct: 208 SSYEPELFPGLIYRMIKPKIVLLIFVSGKTVLTGAKVREEIYQAFEMIYPVLQDF 262
>gi|389749066|gb|EIM90243.1| TBP-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 301
Score = 268 bits (685), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 124/172 (72%), Positives = 148/172 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI++PKTTALIF+SGK+V
Sbjct: 124 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMV 183
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE ++LA+RKYARIVQK+GF +F +FKIQNIVGSCDV+FPI+LE L H F
Sbjct: 184 VTGAKSEDDSRLASRKYARIVQKLGFDAKFSEFKIQNIVGSCDVKFPIRLEGLAYSHGQF 243
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP V +LIF+SGK+V+TGAK RE+IY AFN IY VL
Sbjct: 244 SSYEPELFPGLIYRMIKPKVVLLIFVSGKIVLTGAKVREEIYTAFNTIYTVL 295
>gi|409046465|gb|EKM55945.1| hypothetical protein PHACADRAFT_256913 [Phanerochaete carnosa
HHB-10118-sp]
Length = 321
Score = 268 bits (684), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 124/172 (72%), Positives = 148/172 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI++PKTTALIF+SGK+V
Sbjct: 144 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMV 203
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE ++LA+RKYARIVQK+GF +F +FKIQNIVGSCDV+FPI+LE L H F
Sbjct: 204 VTGAKSEDDSRLASRKYARIVQKLGFDAKFSEFKIQNIVGSCDVKFPIRLEGLAYSHGQF 263
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP V +LIF+SGK+V+TGAK RE+IY AFN IY VL
Sbjct: 264 SSYEPELFPGLIYRMIKPKVVLLIFVSGKIVLTGAKVREEIYTAFNTIYTVL 315
>gi|37726863|gb|AAO34522.1| TATA-binding protein [Ginglymostoma cirratum]
Length = 302
Score = 268 bits (684), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 148/175 (84%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAE P RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 124 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEKKPKRFAAVIMRIREPRTTALIFSSGKMV 183
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 184 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 243
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 244 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 298
>gi|145352509|ref|XP_001420584.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580819|gb|ABO98877.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 226
Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 121/175 (69%), Positives = 146/175 (83%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ PV+QNIVAT+NL+CKLDLK IA HARN EYNP RF+A MRI+ PKTTALIFSSGK+V
Sbjct: 29 IVPVLQNIVATVNLDCKLDLKTIAFHARNVEYNPKRFAAAIMRIRNPKTTALIFSSGKMV 88
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAK+E+ A+ AARKYA+++ K+GFP QFKDFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 89 CTGAKTEALAREAARKYAKVIIKLGFPAQFKDFKIQNMVGSCDVQFPIRLEGLAWQHGHF 148
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
+ YEPELFPGLIYRM+ P + +LIF+SGK+V+TG K RE IY AF NIYPVL +
Sbjct: 149 AQYEPELFPGLIYRMQMPKIVLLIFVSGKIVLTGGKRREDIYQAFENIYPVLTEF 203
>gi|19115478|ref|NP_594566.1| TATA-binding protein (TBP) [Schizosaccharomyces pombe 972h-]
gi|135639|sp|P17871.1|TBP_SCHPO RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; Short=TBP; AltName:
Full=TATA-binding factor; AltName: Full=TATA-box factor;
AltName: Full=Transcription initiation factor TFIID TBP
subunit
gi|295936|emb|CAA37494.1| TFIID [Schizosaccharomyces pombe]
gi|1044934|emb|CAA91430.1| transcription initiation factor tfiid [Schizosaccharomyces pombe]
gi|6723895|emb|CAB66471.1| TATA-binding protein (TBP) [Schizosaccharomyces pombe]
gi|226987|prf||1612348A transcription factor IID
Length = 231
Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 123/175 (70%), Positives = 148/175 (84%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPK+TALIF+SGK+V
Sbjct: 54 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKSTALIFASGKMV 113
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
G KSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 114 VLGGKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAYSHGTF 173
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP V +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 174 SSYEPELFPGLIYRMVKPKVVLLIFVSGKIVLTGAKVREEIYQAFEAIYPVLSEF 228
>gi|351714662|gb|EHB17581.1| TATA-box-binding protein [Heterocephalus glaber]
Length = 300
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 147/175 (84%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 122 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 181
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q+ ARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 182 CTGAKSEEQSSRLARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 241
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 242 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 296
>gi|451854730|gb|EMD68022.1| hypothetical protein COCSADRAFT_156488 [Cochliobolus sativus
ND90Pr]
gi|452000886|gb|EMD93346.1| hypothetical protein COCHEDRAFT_1153946 [Cochliobolus
heterostrophus C5]
Length = 249
Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 121/175 (69%), Positives = 147/175 (84%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL +LDLK IALHARNAEYNP RF+AV MRI+EPKTTAL+F+SGK+V
Sbjct: 72 IVPTLQNIVATVNLSARLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALVFASGKMV 131
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE ++LA+RKYARI+QK+GF +F DFKIQNIVGSCD+ FPI+LE L H F
Sbjct: 132 VTGAKSEDDSRLASRKYARIIQKLGFSAKFTDFKIQNIVGSCDIRFPIRLEGLASRHHTF 191
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 192 SSYEPELFPGLIYRMMKPRIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSDF 246
>gi|323305296|gb|EGA59043.1| Spt15p [Saccharomyces cerevisiae FostersB]
Length = 240
Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 123/175 (70%), Positives = 147/175 (84%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+ L C+LDLK +ALHARNAEYNP F+AV MRI+EPKTTALIF+SGK+V
Sbjct: 63 IVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPKXFAAVIMRIREPKTTALIFASGKMV 122
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QKIGF +F DFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 123 VTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTF 182
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 183 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEF 237
>gi|189192825|ref|XP_001932751.1| TATA-box-binding protein [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|330941403|ref|XP_003306059.1| hypothetical protein PTT_19076 [Pyrenophora teres f. teres 0-1]
gi|187978315|gb|EDU44941.1| TATA-box-binding protein [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|311316652|gb|EFQ85856.1| hypothetical protein PTT_19076 [Pyrenophora teres f. teres 0-1]
Length = 249
Score = 266 bits (680), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 121/175 (69%), Positives = 147/175 (84%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL +LDLK IALHARNAEYNP RF+AV MRI+EPKTTAL+F+SGK+V
Sbjct: 72 IVPTLQNIVATVNLSARLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALVFASGKMV 131
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE ++LA+RKYARI+QK+GF +F DFKIQNIVGSCD+ FPI+LE L H F
Sbjct: 132 VTGAKSEDDSRLASRKYARIIQKLGFSAKFTDFKIQNIVGSCDIRFPIRLEGLASRHHTF 191
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 192 SSYEPELFPGLIYRMMKPRIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSDF 246
>gi|338726931|ref|XP_001496050.2| PREDICTED: TATA box-binding protein-like protein 2-like [Equus
caballus]
Length = 555
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 123/170 (72%), Positives = 145/170 (85%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QN+V+T NL CKLDLKKIAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGKIVCT
Sbjct: 380 PQLQNVVSTANLACKLDLKKIALQARNAEYNPKRFAAVIMRIREPRTTALIFSSGKIVCT 439
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GA+SE Q++LAARK+AR++QK+GFP +F DFKIQN+VGSCDV FPI+LE L H F +
Sbjct: 440 GARSEEQSRLAARKFARVIQKLGFPARFLDFKIQNLVGSCDVRFPIRLEGLVLTHQQFCS 499
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPELFPGLIYRM P V +LIF+SGKVV+TGAK R +IY AF NIYP+L
Sbjct: 500 YEPELFPGLIYRMVNPRVVLLIFVSGKVVLTGAKERSEIYEAFKNIYPIL 549
>gi|255728115|ref|XP_002548983.1| TATA-box binding protein [Candida tropicalis MYA-3404]
gi|240133299|gb|EER32855.1| TATA-box binding protein [Candida tropicalis MYA-3404]
Length = 257
Score = 266 bits (680), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 123/175 (70%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI++PKTTALIF+SGK+V
Sbjct: 80 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMV 139
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGS DV+F I+LE L H F
Sbjct: 140 VTGAKSEDDSKLASRKYARIIQKLGFNAKFCDFKIQNIVGSTDVKFAIRLEGLAFAHGTF 199
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF +IYPVLN +
Sbjct: 200 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKKREEIYDAFESIYPVLNEF 254
>gi|74095979|ref|NP_001027845.1| TATA box-binding protein-like protein 2 [Takifugu rubripes]
gi|82127187|sp|Q6SJ94.1|TBPL2_FUGRU RecName: Full=TATA box-binding protein-like protein 2;
Short=TBP-like protein 2; AltName: Full=TATA box-binding
protein-related factor 3; Short=TBP-related factor 3
gi|38569213|gb|AAR24283.1| TBP-related factor 3 [Takifugu rubripes]
gi|148910851|tpg|DAA06036.1| TPA_inf: TATA box binding protein-like 2 [Takifugu rubripes]
Length = 322
Score = 266 bits (680), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 124/173 (71%), Positives = 146/173 (84%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL C LDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 147 PQLQNIVSTVNLGCPLDLKFIALQARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 206
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+V SCDV FPI+LE L H FS+
Sbjct: 207 GAKSEEQSRLAARKYARVVQKLGFPARFMDFKIQNMVASCDVCFPIRLEGLVLTHQQFSS 266
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 267 YEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERAEIYEAFENIYPILRGF 319
>gi|321264592|ref|XP_003197013.1| TATA-box binding protein (Transcription initiation factor TFIID TBP
subunit) [Cryptococcus gattii WM276]
gi|317463491|gb|ADV25226.1| TATA-box binding protein (Transcription initiation factor TFIID TBP
subunit), putative [Cryptococcus gattii WM276]
Length = 232
Score = 266 bits (679), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 121/172 (70%), Positives = 148/172 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI++P+TTALIF+SGK+V
Sbjct: 54 LVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPRRFAAVVMRIRDPRTTALIFASGKMV 113
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE ++LA+RKYARI+QK+GF +F +FKIQN+VGSCDV+FPI+LE L H F
Sbjct: 114 VTGAKSEDDSRLASRKYARIIQKLGFEAKFAEFKIQNMVGSCDVKFPIRLEGLAFSHGAF 173
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP V +LIF+SGK+V+TGAK RE+IY AFN IY VL
Sbjct: 174 SSYEPELFPGLIYRMLKPKVVILIFVSGKIVLTGAKVREEIYMAFNQIYSVL 225
>gi|198427023|ref|XP_002127120.1| PREDICTED: similar to TATA-box binding protein [Ciona intestinalis]
Length = 356
Score = 266 bits (679), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 124/173 (71%), Positives = 150/173 (86%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL+ KLDLK+IALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 180 PQLQNIVSTVNLDTKLDLKRIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 239
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE+ ++LAARKYAR+VQK+GFP +F DFKIQN+VGS DV+FPI+LE L H+ FS+
Sbjct: 240 GAKSENASRLAARKYARVVQKLGFPAKFIDFKIQNMVGSVDVKFPIRLEGLVLAHSQFSS 299
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK +I AFNNIYP+L Y
Sbjct: 300 YEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVYNEIEEAFNNIYPILKGY 352
>gi|405124108|gb|AFR98870.1| general RNA polymerase II transcription factor [Cryptococcus
neoformans var. grubii H99]
Length = 232
Score = 266 bits (679), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 121/172 (70%), Positives = 148/172 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI++P+TTALIF+SGK+V
Sbjct: 54 LVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPRRFAAVVMRIRDPRTTALIFASGKMV 113
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE ++LA+RKYARI+QK+GF +F +FKIQN+VGSCDV+FPI+LE L H F
Sbjct: 114 VTGAKSEDDSRLASRKYARIIQKLGFEAKFAEFKIQNMVGSCDVKFPIRLEGLAFSHGAF 173
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP V +LIF+SGK+V+TGAK RE+IY AFN IY VL
Sbjct: 174 SSYEPELFPGLIYRMLKPKVVILIFVSGKIVLTGAKVREEIYMAFNQIYSVL 225
>gi|396467023|ref|XP_003837823.1| similar to transcription initiation factor TFIID [Leptosphaeria
maculans JN3]
gi|312214387|emb|CBX94379.1| similar to transcription initiation factor TFIID [Leptosphaeria
maculans JN3]
Length = 246
Score = 266 bits (679), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 121/175 (69%), Positives = 148/175 (84%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL +LDLK IALHARNAEYNP RF+AV MRI+EPKTTAL+F+SGK+V
Sbjct: 69 IVPTLQNIVATVNLSARLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALVFASGKMV 128
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE ++LA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 129 VTGAKSEDDSRLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHTF 188
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 189 SSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSDF 243
>gi|58270288|ref|XP_572300.1| general RNA polymerase II transcription factor [Cryptococcus
neoformans var. neoformans JEC21]
gi|134117708|ref|XP_772488.1| hypothetical protein CNBL1030 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255102|gb|EAL17841.1| hypothetical protein CNBL1030 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228558|gb|AAW44993.1| general RNA polymerase II transcription factor, putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 232
Score = 266 bits (679), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 121/172 (70%), Positives = 148/172 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI++P+TTALIF+SGK+V
Sbjct: 54 LVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPRRFAAVVMRIRDPRTTALIFASGKMV 113
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE ++LA+RKYARI+QK+GF +F +FKIQN+VGSCDV+FPI+LE L H F
Sbjct: 114 VTGAKSEDDSRLASRKYARIIQKLGFEAKFAEFKIQNMVGSCDVKFPIRLEGLAFSHGAF 173
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP V +LIF+SGK+V+TGAK RE+IY AFN IY VL
Sbjct: 174 SSYEPELFPGLIYRMLKPKVVILIFVSGKIVLTGAKVREEIYMAFNQIYSVL 225
>gi|47214810|emb|CAF89637.1| unnamed protein product [Tetraodon nigroviridis]
Length = 309
Score = 265 bits (678), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 124/173 (71%), Positives = 146/173 (84%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL C LDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 134 PQLQNIVSTVNLGCPLDLKFIALQARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 193
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+V SCDV FPI+LE L H FS+
Sbjct: 194 GAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVASCDVCFPIRLEGLVLTHQQFSS 253
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 254 YEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERAEIYEAFENIYPILRGF 306
>gi|169606198|ref|XP_001796519.1| hypothetical protein SNOG_06135 [Phaeosphaeria nodorum SN15]
gi|160706937|gb|EAT85966.2| hypothetical protein SNOG_06135 [Phaeosphaeria nodorum SN15]
Length = 247
Score = 265 bits (678), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 121/175 (69%), Positives = 148/175 (84%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL +LDLK IALHARNAEYNP RF+AV MRI+EPKTTAL+F+SGK+V
Sbjct: 70 IVPTLQNIVATVNLSARLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALVFASGKMV 129
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE ++LA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H F
Sbjct: 130 VTGAKSEDDSRLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHTF 189
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL+ +
Sbjct: 190 SSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVLSDF 244
>gi|353234891|emb|CCA66911.1| probable TATA-box-binding factor TBP [Piriformospora indica DSM
11827]
Length = 297
Score = 265 bits (678), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 122/175 (69%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P++QNIVAT+NL +LDLK IA+HARNAEYNP RF+AV MRI+EPKTTALIF+SG++V
Sbjct: 120 IVPILQNIVATVNLGTRLDLKTIAMHARNAEYNPKRFAAVIMRIREPKTTALIFASGQMV 179
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE ++LA+RKYARI+QK+GF +F +FKIQNIVGSCDV+FPI+LE L+ H F
Sbjct: 180 VTGAKSEDDSRLASRKYARIIQKLGFDAKFTEFKIQNIVGSCDVKFPIRLEGLHYGHGKF 239
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP V +LIF+SGK+V+TGAK RE+IY AFN IYPVL +
Sbjct: 240 SSYEPELFPGLIYRMIKPKVVLLIFVSGKIVLTGAKVREEIYTAFNVIYPVLREF 294
>gi|320588959|gb|EFX01427.1| RNA polymerase 1 and 3 transcription factor complex component
[Grosmannia clavigera kw1407]
Length = 268
Score = 265 bits (678), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 121/170 (71%), Positives = 146/170 (85%)
Query: 6 QNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAK 65
+NIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI++PKTTALIF+SGK+V TGAK
Sbjct: 96 ENIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMVVTGAK 155
Query: 66 SESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEP 125
SE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H FS+YEP
Sbjct: 156 SEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNFSSYEP 215
Query: 126 ELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
ELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL +
Sbjct: 216 ELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYTAFEMIYPVLQDF 265
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARN-AEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
IQNIV + +++ + L+ +A N + Y P F + R+ +PK LIF SGKIV TG
Sbjct: 185 IQNIVGSCDIKFPIRLEGLASRHHNFSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTG 244
Query: 64 AK 65
AK
Sbjct: 245 AK 246
>gi|343427608|emb|CBQ71135.1| probable TATA-box-binding factor TBP [Sporisorium reilianum SRZ2]
Length = 241
Score = 265 bits (678), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 123/172 (71%), Positives = 147/172 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NLE +LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 64 IVPTLQNIVATVNLEVRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 123
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE ++LA+RKYARI+QK+GF +F +FKIQNIVGSCDV FPI+LE L H ++
Sbjct: 124 VTGAKSEDDSRLASRKYARIIQKLGFEAKFSEFKIQNIVGSCDVRFPIRLEGLAYSHGVY 183
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP V +LIF+SGK+V+TGAK RE+IY AFN I PVL
Sbjct: 184 SSYEPELFPGLIYRMVKPKVVLLIFVSGKIVLTGAKVREEIYQAFNLILPVL 235
>gi|71012922|ref|XP_758541.1| transcription initiation factor TFIID-1 [Ustilago maydis 521]
gi|46098199|gb|EAK83432.1| TF21_MAIZE Transcription initiation factor TFIID-1 (TATA-box factor
1) (TATA sequence-binding protein 1) (TBP-1) [Ustilago
maydis 521]
Length = 189
Score = 265 bits (678), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 123/172 (71%), Positives = 147/172 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NLE +LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 12 IVPTLQNIVATVNLEVRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 71
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE ++LA+RKYARI+QK+GF +F +FKIQNIVGSCDV FPI+LE L H ++
Sbjct: 72 VTGAKSEDDSRLASRKYARIIQKLGFEAKFSEFKIQNIVGSCDVRFPIRLEGLAYSHGVY 131
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP V +LIF+SGK+V+TGAK RE+IY AFN I PVL
Sbjct: 132 SSYEPELFPGLIYRMVKPKVVLLIFVSGKIVLTGAKVREEIYQAFNLILPVL 183
>gi|296482511|tpg|DAA24626.1| TPA: TBP protein-like [Bos taurus]
Length = 303
Score = 265 bits (678), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 120/175 (68%), Positives = 147/175 (84%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P + N+V T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTAL+FSSGK+V
Sbjct: 125 LVPQLHNVVCTVNLGCKLDLKSIALLARNAEYNPKRFAAVIMRIREPRTTALLFSSGKMV 184
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTG KSE Q++LAARKYARI+QK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 185 CTGGKSEEQSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEPLVLSHQQF 244
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
++YEPELFPGL+YRM KP + +LIF+SGKVV+TGAK R +IY AFNNIY +L +
Sbjct: 245 ASYEPELFPGLVYRMIKPRIVLLIFVSGKVVLTGAKVRSEIYEAFNNIYSILKGF 299
>gi|89267100|emb|CAJ41964.1| TF21_MAIZE Transcription initiation factor TFIID-1 [Ustilago
hordei]
gi|388856434|emb|CCF49983.1| probable TATA-box-binding factor TBP [Ustilago hordei]
Length = 239
Score = 265 bits (677), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 123/172 (71%), Positives = 147/172 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NLE +LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 62 IVPTLQNIVATVNLEVRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 121
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE ++LA+RKYARI+QK+GF +F +FKIQNIVGSCDV FPI+LE L H ++
Sbjct: 122 VTGAKSEDDSRLASRKYARIIQKLGFEAKFSEFKIQNIVGSCDVRFPIRLEGLAYSHGVY 181
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP V +LIF+SGK+V+TGAK RE+IY AFN I PVL
Sbjct: 182 SSYEPELFPGLIYRMVKPKVVLLIFVSGKIVLTGAKVREEIYQAFNLILPVL 233
>gi|68490865|ref|XP_710759.1| hypothetical protein CaO19.9395 [Candida albicans SC5314]
gi|68490947|ref|XP_710721.1| hypothetical protein CaO19.1837 [Candida albicans SC5314]
gi|3334374|sp|O43133.1|TBP_CANAL RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; Short=TBP; AltName:
Full=TATA-binding factor; AltName: Full=TATA-box factor;
AltName: Full=Transcription initiation factor TFIID TBP
subunit
gi|2708495|gb|AAC49985.1| TATA-binding protein [Candida albicans]
gi|2708497|gb|AAC49986.1| TATA-binding protein [Candida albicans]
gi|46431958|gb|EAK91473.1| hypothetical protein CaO19.1837 [Candida albicans SC5314]
gi|46432000|gb|EAK91511.1| hypothetical protein CaO19.9395 [Candida albicans SC5314]
Length = 238
Score = 265 bits (676), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 123/173 (71%), Positives = 148/173 (85%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI++PKTTALIF+SGK+V T
Sbjct: 63 PTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMVVT 122
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGS DV+F I+LE L H FS+
Sbjct: 123 GAKSEDDSKLASRKYARIIQKLGFNAKFCDFKIQNIVGSTDVKFAIRLEGLAFAHGTFSS 182
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF +IYPVLN +
Sbjct: 183 YEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKKREEIYDAFESIYPVLNEF 235
>gi|72679753|gb|AAI00306.1| TATA box binding protein like 2 [Mus musculus]
gi|148910845|tpg|DAA06033.1| TPA_inf: TATA box binding protein-like 2 [Mus musculus]
gi|219520477|gb|AAI44905.1| Tbpl2 protein [Mus musculus]
Length = 349
Score = 265 bits (676), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 121/175 (69%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QN+V+T NL CKLDL+KIAL+A+N EYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 172 IVPQLQNVVSTANLACKLDLRKIALNAKNTEYNPKRFAAVIMRIREPRTTALIFSSGKVV 231
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE +++LAARKYAR+VQK+GFPV+F +FKIQN+VGSCDV+FPI+LE L H F
Sbjct: 232 CTGAKSEEESRLAARKYARVVQKLGFPVRFFNFKIQNMVGSCDVKFPIRLEILALTHRQF 291
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIY+M KP V +LIF SGKVV+TGAK R +IY AF N+YP+L +
Sbjct: 292 SSYEPELFPGLIYKMVKPQVVLLIFASGKVVLTGAKERSEIYEAFENMYPILESF 346
>gi|238878530|gb|EEQ42168.1| TATA-box binding protein [Candida albicans WO-1]
Length = 238
Score = 265 bits (676), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 123/175 (70%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI++PKTTALIF+SGK+V
Sbjct: 61 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMV 120
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGS DV+F I+LE L H F
Sbjct: 121 VTGAKSEDDSKLASRKYARIIQKLGFNAKFCDFKIQNIVGSTDVKFAIRLEGLAFAHGTF 180
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF +IYPVLN +
Sbjct: 181 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKKREEIYDAFESIYPVLNEF 235
>gi|241949839|ref|XP_002417642.1| TATA sequence-binding protein, putative; TATA-binding factor,
putative; TATA-box binding protein, putative; TATA-box
factor, putative; transcription initiation factor tfIID
TBP subunit, putative [Candida dubliniensis CD36]
gi|223640980|emb|CAX45328.1| TATA sequence-binding protein, putative [Candida dubliniensis CD36]
Length = 233
Score = 265 bits (676), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 123/175 (70%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI++PKTTALIF+SGK+V
Sbjct: 56 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMV 115
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGS DV+F I+LE L H F
Sbjct: 116 VTGAKSEDDSKLASRKYARIIQKLGFNAKFCDFKIQNIVGSTDVKFAIRLEGLAFAHGTF 175
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF +IYPVLN +
Sbjct: 176 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKKREEIYDAFESIYPVLNEF 230
>gi|443895156|dbj|GAC72502.1| hypothetical protein PANT_7d00127 [Pseudozyma antarctica T-34]
Length = 238
Score = 265 bits (676), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 123/172 (71%), Positives = 147/172 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NLE +LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 61 IVPTLQNIVATVNLEVRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 120
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE ++LA+RKYARI+QK+GF +F +FKIQNIVGSCDV FPI+LE L H ++
Sbjct: 121 VTGAKSEDDSRLASRKYARIIQKLGFEAKFSEFKIQNIVGSCDVRFPIRLEGLAYSHGVY 180
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S+YEPELFPGLIYRM KP V +LIF+SGK+V+TGAK RE+IY AFN I PVL
Sbjct: 181 SSYEPELFPGLIYRMVKPKVVLLIFVSGKIVLTGAKVREEIYQAFNLILPVL 232
>gi|348539536|ref|XP_003457245.1| PREDICTED: TATA box-binding protein-like protein 2-like
[Oreochromis niloticus]
Length = 319
Score = 264 bits (675), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 123/173 (71%), Positives = 146/173 (84%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL C LDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 144 PQLQNIVSTVNLGCPLDLKFIALQARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 203
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE Q++LAARKYAR+VQK+GFP +F +FKIQN+V SCDV FPI+LE L H FS+
Sbjct: 204 GAKSEEQSRLAARKYARVVQKLGFPARFLEFKIQNMVASCDVCFPIRLEGLVLTHQQFSS 263
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 264 YEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERAEIYEAFENIYPILKGF 316
>gi|148676212|gb|EDL08159.1| TBP-related factor 3 [Mus musculus]
Length = 208
Score = 264 bits (674), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 121/175 (69%), Positives = 150/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QN+V+T NL CKLDL+KIAL+A+N EYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 31 IVPQLQNVVSTANLACKLDLRKIALNAKNTEYNPKRFAAVIMRIREPRTTALIFSSGKVV 90
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE +++LAARKYAR+VQK+GFPV+F +FKIQN+VGSCDV+FPI+LE L H F
Sbjct: 91 CTGAKSEEESRLAARKYARVVQKLGFPVRFFNFKIQNMVGSCDVKFPIRLEILALTHRQF 150
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIY+M KP V +LIF SGKVV+TGAK R +IY AF N+YP+L +
Sbjct: 151 SSYEPELFPGLIYKMVKPQVVLLIFASGKVVLTGAKERSEIYEAFENMYPILESF 205
>gi|312069027|ref|XP_003137490.1| TATA-box binding protein [Loa loa]
gi|307767348|gb|EFO26582.1| TATA-box binding protein [Loa loa]
Length = 369
Score = 264 bits (674), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 124/174 (71%), Positives = 146/174 (83%)
Query: 2 APVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVC 61
+P +QNIV+T+NL LDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VC
Sbjct: 194 SPALQNIVSTVNLGVPLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVC 253
Query: 62 TGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFS 121
TGAKSE ++LAARKYARIVQK+GF +F +FK+QN+VGSCDV FPI+LE L H FS
Sbjct: 254 TGAKSEESSRLAARKYARIVQKLGFNAKFTEFKVQNMVGSCDVRFPIQLEGLCLTHTQFS 313
Query: 122 TYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
TYEPELFPGLIYRM KP V +LIF+SGKVVITGAK ++ I AFN IYP+L +
Sbjct: 314 TYEPELFPGLIYRMVKPRVVLLIFVSGKVVITGAKYKKDIDDAFNQIYPILKGF 367
>gi|255078440|ref|XP_002502800.1| transcription elongation-nucleosome displacement protein
[Micromonas sp. RCC299]
gi|226518066|gb|ACO64058.1| transcription elongation-nucleosome displacement protein
[Micromonas sp. RCC299]
Length = 240
Score = 264 bits (674), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 119/175 (68%), Positives = 145/175 (82%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+CKLDLK IA HARN EYNP RF+A MRI+ PKTTALIFSSGK+V
Sbjct: 37 IVPQLQNIVATVNLDCKLDLKTIAFHARNVEYNPKRFAAAIMRIRAPKTTALIFSSGKMV 96
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAK+E+ A+ AARKYA+++ K+GFP QFKDFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 97 CTGAKTEALAREAARKYAKVISKLGFPAQFKDFKIQNMVGSCDVKFPIRLEGLAWSHGHF 156
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
+ YEPELFPGLIYRM+ P + +LIF+SGK+V+TG K R+ IY AF NIYPVL +
Sbjct: 157 AQYEPELFPGLIYRMQMPKIVLLIFVSGKIVLTGGKNRDDIYKAFENIYPVLTEF 211
>gi|328870425|gb|EGG18799.1| TATA-binding protein [Dictyostelium fasciculatum]
Length = 236
Score = 264 bits (674), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 122/175 (69%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ PV+QNIV+T+N+ +L+LK IAL A NAEYNP RF+AV MRI++PKTTALIF SGK+V
Sbjct: 47 IVPVLQNIVSTVNMGTELNLKTIALGALNAEYNPKRFAAVIMRIRDPKTTALIFKSGKMV 106
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE +KLAARKYARI+QK+ FP FKDFKIQNIVGSCDV+FPI+LE LN H +F
Sbjct: 107 CTGAKSEEASKLAARKYARIIQKLDFPAIFKDFKIQNIVGSCDVKFPIRLENLNNAHKVF 166
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
+ YEPE+FPGLIY+M +P V +LIF+SGK+V+TGAK RE+IY AF NIYPVLN +
Sbjct: 167 TNYEPEIFPGLIYKMIQPKVVLLIFVSGKIVLTGAKVREEIYEAFENIYPVLNSF 221
>gi|324518621|gb|ADY47156.1| TATA-box-binding protein, partial [Ascaris suum]
Length = 384
Score = 264 bits (674), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 124/174 (71%), Positives = 146/174 (83%)
Query: 2 APVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVC 61
+P +QNIV+T+NL LDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VC
Sbjct: 209 SPALQNIVSTVNLGVPLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVC 268
Query: 62 TGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFS 121
TGAKSE ++LAARKYARIVQK+GF +F +FK+QN+VGSCDV FPI+LE L H FS
Sbjct: 269 TGAKSEEASRLAARKYARIVQKLGFNAKFTEFKVQNMVGSCDVRFPIQLEGLCLTHTQFS 328
Query: 122 TYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
TYEPELFPGLIYRM KP V +LIF+SGKVVITGAK ++ I AFN IYP+L +
Sbjct: 329 TYEPELFPGLIYRMVKPRVVLLIFVSGKVVITGAKFKKDIDDAFNQIYPILKGF 382
>gi|340371811|ref|XP_003384438.1| PREDICTED: TATA-box-binding protein-like [Amphimedon queenslandica]
Length = 291
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 121/170 (71%), Positives = 147/170 (86%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+ L CKLDLK IAL ARNAEYNP RF+AV MRI++P+TTAL+FSSGK+VCT
Sbjct: 115 PQLQNIVSTVTLGCKLDLKDIALRARNAEYNPKRFAAVIMRIRDPRTTALVFSSGKMVCT 174
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++LAARKYARI+QK+GFP +F +FKIQN+VGSCDV+FPI+LE L H+ FS+
Sbjct: 175 GAKSEDFSRLAARKYARIIQKLGFPAKFLEFKIQNMVGSCDVKFPIRLEGLVVAHSQFSS 234
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPELFPGLIYRM +P + +LIF+SGKVV+TGAK R QI AFNNIYP+L
Sbjct: 235 YEPELFPGLIYRMVRPRIVLLIFVSGKVVLTGAKERSQIIEAFNNIYPIL 284
>gi|330846314|ref|XP_003294984.1| TATA-binding protein [Dictyostelium purpureum]
gi|325074431|gb|EGC28489.1| TATA-binding protein [Dictyostelium purpureum]
Length = 224
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 121/173 (69%), Positives = 145/173 (83%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+N+ +LDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF SGK+VCT
Sbjct: 43 PTLQNIVSTVNMATELDLKAIALGARNAEYNPKRFAAVIMRIREPKTTALIFKSGKMVCT 102
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE +K AARKYARI+QK+ FP +F DFKIQNIVGSCDV+FPIKLE L+ H F+
Sbjct: 103 GAKSEDASKYAARKYARIIQKLDFPARFTDFKIQNIVGSCDVKFPIKLELLHNAHTSFTN 162
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPE+FPGLIY+M +P V +LIF+SGK+V+TGAK RE+IY AF NIYPVL +
Sbjct: 163 YEPEIFPGLIYKMIQPKVVLLIFVSGKIVLTGAKVREEIYEAFENIYPVLTAF 215
>gi|170591981|ref|XP_001900748.1| TATA-box binding protein [Brugia malayi]
gi|158591900|gb|EDP30503.1| TATA-box binding protein, putative [Brugia malayi]
Length = 347
Score = 263 bits (672), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 124/171 (72%), Positives = 145/171 (84%)
Query: 2 APVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVC 61
+P +QNIV+T+NL LDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VC
Sbjct: 172 SPALQNIVSTVNLGVPLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVC 231
Query: 62 TGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFS 121
TGAKSE ++LAARKYARIVQK+GF +F +FK+QN+VGSCDV FPI+LE L H FS
Sbjct: 232 TGAKSEESSRLAARKYARIVQKLGFNAKFTEFKVQNMVGSCDVRFPIQLEGLCLTHTQFS 291
Query: 122 TYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
TYEPELFPGLIYRM KP V +LIF+SGKVVITGAK ++ I AFN IYP+L
Sbjct: 292 TYEPELFPGLIYRMVKPRVVLLIFVSGKVVITGAKYKKDIDDAFNQIYPIL 342
>gi|150247085|ref|NP_001092831.1| TATA box-binding protein-like protein 2 [Rattus norvegicus]
gi|166987367|sp|A6H909.1|TBPL2_RAT RecName: Full=TATA box-binding protein-like protein 2;
Short=TBP-like protein 2; AltName: Full=TATA box-binding
protein-related factor 3; Short=TBP-related factor 3
gi|148910847|tpg|DAA06034.1| TPA_inf: TATA box binding protein-like 2 [Rattus norvegicus]
Length = 344
Score = 263 bits (672), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 120/175 (68%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QN+V+T NL CKLDL+KIAL+A+N EYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 167 IVPQLQNVVSTANLACKLDLRKIALNAKNTEYNPKRFAAVIMRIREPRTTALIFSSGKVV 226
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE +++LAARKYAR+VQK+GFPV+F +FKIQN+V SCDV+FPI+LE L H F
Sbjct: 227 CTGAKSEDESRLAARKYARVVQKLGFPVRFFNFKIQNMVASCDVKFPIRLEILALTHRQF 286
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIY+M KP V +LIF SGKVV+TGAK R +IY AF N+YP+L +
Sbjct: 287 SSYEPELFPGLIYKMVKPQVVLLIFASGKVVLTGAKERSEIYEAFENMYPILESF 341
>gi|66819952|ref|XP_643633.1| TATA-binding protein [Dictyostelium discoideum AX4]
gi|166210407|sp|P26355.2|TBP_DICDI RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; Short=TBP; AltName:
Full=TATA-binding factor; AltName: Full=TATA-box factor;
AltName: Full=Transcription initiation factor TFIID TBP
subunit
gi|60471603|gb|EAL69559.1| TATA-binding protein [Dictyostelium discoideum AX4]
Length = 205
Score = 263 bits (671), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 120/173 (69%), Positives = 146/173 (84%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+N+ +LDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF SGK+VCT
Sbjct: 25 PTLQNIVSTVNMATELDLKAIALGARNAEYNPKRFAAVIMRIREPKTTALIFKSGKMVCT 84
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++ AARKYARI+QK+ FP +F DFKIQNIVGSCDV+FPIKLE L+ H F+
Sbjct: 85 GAKSEDASRFAARKYARIIQKLDFPARFTDFKIQNIVGSCDVKFPIKLELLHNAHTSFTN 144
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPE+FPGLIY+M +P V +LIF+SGK+V+TGAK RE+IY AF NIYPVL+ +
Sbjct: 145 YEPEIFPGLIYKMIQPKVVLLIFVSGKIVLTGAKVREEIYEAFENIYPVLSAF 197
>gi|322698718|gb|EFY90486.1| TATA binding protein [Metarhizium acridum CQMa 102]
Length = 260
Score = 262 bits (670), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 124/182 (68%), Positives = 149/182 (81%), Gaps = 7/182 (3%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPS-------RFSAVTMRIKEPKTTALI 53
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALI
Sbjct: 76 ITPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKMLTFDPKRFAAVIMRIREPKTTALI 135
Query: 54 FSSGKIVCTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERL 113
F+SGK+V TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L
Sbjct: 136 FASGKMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGL 195
Query: 114 NGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
H FS+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL
Sbjct: 196 ASRHHNFSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQ 255
Query: 174 VY 175
+
Sbjct: 256 DF 257
>gi|303283248|ref|XP_003060915.1| transcription elongation-nucleosome displacement protein
[Micromonas pusilla CCMP1545]
gi|226457266|gb|EEH54565.1| transcription elongation-nucleosome displacement protein
[Micromonas pusilla CCMP1545]
Length = 249
Score = 262 bits (670), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 119/175 (68%), Positives = 144/175 (82%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL+CKLDLK IA HARN EYNP RF+A MRI+ PKTTALIFSSGK+V
Sbjct: 42 IVPTLQNIVATVNLDCKLDLKTIAFHARNVEYNPKRFAAAIMRIRAPKTTALIFSSGKMV 101
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAK+E+ A+ AARKYA+++ K+GFP QFK+FKIQN+VGSCDV+FPI+LE L H F
Sbjct: 102 CTGAKTEALAREAARKYAKVISKLGFPAQFKEFKIQNMVGSCDVKFPIRLEGLAWSHGHF 161
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
+ YEPELFPGLIYRM P + +LIF+SGK+V+TG K RE IY AF NIYPVL +
Sbjct: 162 AQYEPELFPGLIYRMVVPKIVLLIFVSGKIVLTGGKKREDIYQAFENIYPVLTEF 216
>gi|449278063|gb|EMC86030.1| TATA-box-binding protein [Columba livia]
Length = 301
Score = 262 bits (670), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 123/175 (70%), Positives = 146/175 (83%), Gaps = 2/175 (1%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 125 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 184
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE M
Sbjct: 185 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGXXXXKKML 244
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 245 --YEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 297
>gi|149039452|gb|EDL93672.1| rCG45623 [Rattus norvegicus]
Length = 190
Score = 262 bits (669), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 120/175 (68%), Positives = 149/175 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QN+V+T NL CKLDL+KIAL+A+N EYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 13 IVPQLQNVVSTANLACKLDLRKIALNAKNTEYNPKRFAAVIMRIREPRTTALIFSSGKVV 72
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE +++LAARKYAR+VQK+GFPV+F +FKIQN+V SCDV+FPI+LE L H F
Sbjct: 73 CTGAKSEDESRLAARKYARVVQKLGFPVRFFNFKIQNMVASCDVKFPIRLEILALTHRQF 132
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIY+M KP V +LIF SGKVV+TGAK R +IY AF N+YP+L +
Sbjct: 133 SSYEPELFPGLIYKMVKPQVVLLIFASGKVVLTGAKERSEIYEAFENMYPILESF 187
>gi|256089271|ref|XP_002580736.1| TATA-box binding protein [Schistosoma mansoni]
gi|350646100|emb|CCD59202.1| TATA-box binding protein, putative [Schistosoma mansoni]
Length = 271
Score = 262 bits (669), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 122/178 (68%), Positives = 147/178 (82%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV T+ L CKL+LK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 78 PQLQNIVCTVYLGCKLNLKNIALSARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 137
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE QA+LAARKYARI+Q++GF FK+FKIQN+VGSCDV F I+LE L F+T
Sbjct: 138 GAKSEEQARLAARKYARIIQRLGFEAHFKEFKIQNMVGSCDVRFHIRLEGLVLSQGQFAT 197
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYDQ 180
YEPELFPGLIYRM KP + +L+F+SGK+V+TGAK RE+IY AFNNIYP+L + D+
Sbjct: 198 YEPELFPGLIYRMTKPKIVLLVFVSGKIVLTGAKVREEIYEAFNNIYPILKNFKKSDK 255
>gi|46128099|ref|XP_388603.1| hypothetical protein FG08427.1 [Gibberella zeae PH-1]
Length = 290
Score = 261 bits (668), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 124/178 (69%), Positives = 148/178 (83%), Gaps = 6/178 (3%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPS------RFSAVTMRIKEPKTTALIF 54
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF
Sbjct: 77 ITPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKVHQTLRRFAAVIMRIREPKTTALIF 136
Query: 55 SSGKIVCTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLN 114
+SGK+V TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L
Sbjct: 137 ASGKMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLA 196
Query: 115 GFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
H FS+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL
Sbjct: 197 SRHHNFSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVL 254
>gi|395843435|ref|XP_003794490.1| PREDICTED: TATA box-binding protein-like protein 2 [Otolemur
garnettii]
Length = 364
Score = 261 bits (667), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 123/175 (70%), Positives = 145/175 (82%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV TINL CKLDL++IAL A+N EYNP RFSAV MRI+EP+TTALIFSSGKIV
Sbjct: 187 IVPELQNIVCTINLACKLDLREIALRAKNTEYNPQRFSAVIMRIREPRTTALIFSSGKIV 246
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARK+AR+VQK+GFP +F DFKI N+VGSCDV FPI+LE L H F
Sbjct: 247 CTGAKSEEQSRLAARKFARVVQKLGFPARFLDFKIHNMVGSCDVGFPIRLEGLVLAHQQF 306
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
+YEPELFPGLIYRM KP V +LIF+SGKVV+ GAK R +IY AF NIY +L V+
Sbjct: 307 CSYEPELFPGLIYRMVKPRVVVLIFVSGKVVLAGAKKRSEIYEAFENIYSILKVF 361
>gi|44969211|gb|AAS49602.1| TATA box-binding protein [Scyliorhinus canicula]
Length = 253
Score = 261 bits (667), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 120/166 (72%), Positives = 143/166 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 88 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 147
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGA+SE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 148 CTGARSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 207
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFN 166
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF
Sbjct: 208 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFE 253
>gi|341900545|gb|EGT56480.1| CBN-TBP-1 protein [Caenorhabditis brenneri]
Length = 337
Score = 261 bits (667), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 123/170 (72%), Positives = 144/170 (84%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL +LDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 163 PALQNIVSTVNLGVQLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 222
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++LAARKYARIVQK+GF +F +F +QN+VGSCDV FPI+LE L HA FST
Sbjct: 223 GAKSEEASRLAARKYARIVQKLGFQAKFTEFMVQNMVGSCDVRFPIQLEGLCITHAQFST 282
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPELFPGLIYRM KP V +LIF+SGKVVITGAK ++ I AF IYP+L
Sbjct: 283 YEPELFPGLIYRMVKPRVVLLIFVSGKVVITGAKTKKDIDDAFGQIYPIL 332
>gi|290994623|ref|XP_002679931.1| TATA-box binding protein [Naegleria gruberi]
gi|284093550|gb|EFC47187.1| TATA-box binding protein [Naegleria gruberi]
Length = 318
Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 121/177 (68%), Positives = 147/177 (83%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
PVIQN+V+T+NL C+L LK IALHARNAEYNP RF+AV MRI+EPKTTALIF SGK+V T
Sbjct: 133 PVIQNVVSTVNLACELKLKMIALHARNAEYNPKRFAAVIMRIREPKTTALIFQSGKMVVT 192
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE +++LAARKYARI+QK+GF +F +FKIQNIVGSCDV FP++LE LN H +++
Sbjct: 193 GAKSEEESRLAARKYARIIQKLGFNAKFTEFKIQNIVGSCDVGFPVRLEGLNCQHHSYAS 252
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYD 179
YEPE+FPGLIYRM P V +LIF+SGK+V+TGAK R+ IY AF NIYPVL + D
Sbjct: 253 YEPEIFPGLIYRMVDPKVVLLIFVSGKIVLTGAKHRDTIYQAFQNIYPVLRDFKKED 309
>gi|339251280|ref|XP_003373123.1| TATA-box-binding protein [Trichinella spiralis]
gi|316968993|gb|EFV53163.1| TATA-box-binding protein [Trichinella spiralis]
Length = 260
Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 122/173 (70%), Positives = 144/173 (83%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLK+IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 85 PQLQNIVSTVNLGCKLDLKQIALQARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 144
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++LAARKYARIVQK+GF +F DFK+QN+VGSCDV FPI+LE H+ FS
Sbjct: 145 GAKSEDLSRLAARKYARIVQKLGFDAKFMDFKVQNMVGSCDVRFPIQLESFCLTHSQFSA 204
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP V +LIF+SGKVVITGAK + I AF +IYP+L +
Sbjct: 205 YEPELFPGLIYRMVKPRVVLLIFVSGKVVITGAKEKRDIDEAFTSIYPILKSF 257
>gi|294034|gb|AAA16924.1| TATA box-binding protein, partial [Onchocerca volvulus]
Length = 179
Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 124/171 (72%), Positives = 145/171 (84%)
Query: 2 APVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVC 61
+P +QNIV+T+NL LDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VC
Sbjct: 4 SPALQNIVSTVNLGVPLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVC 63
Query: 62 TGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFS 121
TGAKSE ++LAARKYARIVQK+GF +F +FK+QN+VGSCDV FPI+LE L H FS
Sbjct: 64 TGAKSEESSRLAARKYARIVQKLGFNAKFTEFKVQNMVGSCDVRFPIQLEGLCLTHTQFS 123
Query: 122 TYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
TYEPELFPGLIYRM KP V +LIF+SGKVVITGAK ++ I AFN IYP+L
Sbjct: 124 TYEPELFPGLIYRMVKPRVVLLIFVSGKVVITGAKYKKDIDDAFNQIYPIL 174
>gi|308467285|ref|XP_003095891.1| CRE-TBP-1 protein [Caenorhabditis remanei]
gi|308244262|gb|EFO88214.1| CRE-TBP-1 protein [Caenorhabditis remanei]
Length = 338
Score = 260 bits (665), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 123/170 (72%), Positives = 143/170 (84%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL LDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 164 PALQNIVSTVNLGVPLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 223
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++LAARKYARIVQK+GF +F +F +QN+VGSCDV FPI+LE L HA FST
Sbjct: 224 GAKSEEASRLAARKYARIVQKLGFQAKFTEFMVQNMVGSCDVRFPIQLEGLCITHAQFST 283
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPELFPGLIYRM KP V +LIF+SGKVVITGAK ++ I AF IYP+L
Sbjct: 284 YEPELFPGLIYRMVKPRVVLLIFVSGKVVITGAKTKKDIDDAFGQIYPIL 333
>gi|268575218|ref|XP_002642588.1| C. briggsae CBR-TBP-1 protein [Caenorhabditis briggsae]
Length = 337
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 123/170 (72%), Positives = 143/170 (84%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL LDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 163 PALQNIVSTVNLGVPLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 222
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++LAARKYARIVQK+GF +F +F +QN+VGSCDV FPI+LE L HA FST
Sbjct: 223 GAKSEEASRLAARKYARIVQKLGFQAKFTEFMVQNMVGSCDVRFPIQLEGLCITHAQFST 282
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPELFPGLIYRM KP V +LIF+SGKVVITGAK ++ I AF IYP+L
Sbjct: 283 YEPELFPGLIYRMVKPRVVLLIFVSGKVVITGAKTKKDIDDAFGQIYPIL 332
>gi|39979630|ref|NP_951014.1| TATA box-binding protein-like protein 2 [Mus musculus]
gi|81870779|sp|Q6SJ95.1|TBPL2_MOUSE RecName: Full=TATA box-binding protein-like protein 2;
Short=TBP-like protein 2; AltName: Full=TATA box-binding
protein-related factor 3; Short=TBP-related factor 3
gi|38569211|gb|AAR24282.1| TBP-related factor 3 [Mus musculus]
gi|111600530|gb|AAI19161.1| TATA box binding protein like 2 [Mus musculus]
Length = 350
Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 121/176 (68%), Positives = 150/176 (85%), Gaps = 1/176 (0%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QN+V+T NL CKLDL+KIAL+A+N EYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 172 IVPQLQNVVSTANLACKLDLRKIALNAKNTEYNPKRFAAVIMRIREPRTTALIFSSGKVV 231
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE +++LAARKYAR+VQK+GFPV+F +FKIQN+VGSCDV+FPI+LE L H F
Sbjct: 232 CTGAKSEEESRLAARKYARVVQKLGFPVRFFNFKIQNMVGSCDVKFPIRLEILALTHRQF 291
Query: 121 -STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIY+M KP V +LIF SGKVV+TGAK R +IY AF N+YP+L +
Sbjct: 292 SSSYEPELFPGLIYKMVKPQVVLLIFASGKVVLTGAKERSEIYEAFENMYPILESF 347
>gi|414872051|tpg|DAA50608.1| TPA: hypothetical protein ZEAMMB73_869091, partial [Zea mays]
Length = 195
Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 120/167 (71%), Positives = 142/167 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL+CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 21 IVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 80
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q+KLAARKYARI+QK+GFP +FKDFKIQNIVGSCDV+FPI+LE L H F
Sbjct: 81 CTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAF 140
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNN 167
S+YEPELFPGLIYRMK+P + +LIF+SGK+V+TGAK NN
Sbjct: 141 SSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVSCHFLHMLNN 187
>gi|17555358|ref|NP_498635.1| Protein TBP-1 [Caenorhabditis elegans]
gi|417896|sp|P32085.1|TBP_CAEEL RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; Short=TBP; AltName:
Full=TATA-binding factor; AltName: Full=TATA-box factor;
AltName: Full=Transcription initiation factor TFIID TBP
subunit
gi|12275988|gb|AAG50207.1|AF303249_1 transcription factor TFIID [Caenorhabditis elegans]
gi|156448|gb|AAA03582.1| TATA-box binding protein [Caenorhabditis elegans]
gi|351061293|emb|CCD69071.1| Protein TBP-1 [Caenorhabditis elegans]
Length = 340
Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 122/170 (71%), Positives = 143/170 (84%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL +LDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 166 PALQNIVSTVNLGVQLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 225
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++LAARKYARIVQK+GF +F +F +QN+VGSCDV FPI+LE L H+ FST
Sbjct: 226 GAKSEEASRLAARKYARIVQKLGFQAKFTEFMVQNMVGSCDVRFPIQLEGLCITHSQFST 285
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPELFPGLIYRM KP V +LIF+SGKVVITGAK + I AF IYP+L
Sbjct: 286 YEPELFPGLIYRMVKPRVVLLIFVSGKVVITGAKTKRDIDEAFGQIYPIL 335
>gi|349602909|gb|AEP98902.1| TATA-box-binding protein-like protein, partial [Equus caballus]
Length = 169
Score = 259 bits (661), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 120/164 (73%), Positives = 141/164 (85%)
Query: 12 INLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAK 71
+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCTGAKSE Q++
Sbjct: 2 VNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSR 61
Query: 72 LAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGL 131
LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H FS+YEPELFPGL
Sbjct: 62 LAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGL 121
Query: 132 IYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
IYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 122 IYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 165
>gi|354503979|ref|XP_003514057.1| PREDICTED: TATA box-binding protein-like protein 2-like [Cricetulus
griseus]
Length = 350
Score = 258 bits (660), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 119/176 (67%), Positives = 150/176 (85%), Gaps = 1/176 (0%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QN+V+T NL CKLDL+KIAL+A+N EYNP RF+AV MRI+EP+TTAL+FSSGK+V
Sbjct: 172 IVPQLQNVVSTANLACKLDLRKIALNAKNTEYNPKRFAAVIMRIREPRTTALLFSSGKVV 231
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE +++LAARKYAR+VQK+GFPV+F +FKIQN+VGSCDV+FPI+LE L H F
Sbjct: 232 CTGAKSEEESRLAARKYARVVQKLGFPVKFFNFKIQNMVGSCDVKFPIRLEILALTHRQF 291
Query: 121 -STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIY+M +P V +LIF SGKVV+TGAK R +IY AF N+YP+L +
Sbjct: 292 SSSYEPELFPGLIYKMVRPQVVLLIFASGKVVLTGAKERSEIYEAFENMYPILESF 347
>gi|260830471|ref|XP_002610184.1| hypothetical protein BRAFLDRAFT_121529 [Branchiostoma floridae]
gi|229295548|gb|EEN66194.1| hypothetical protein BRAFLDRAFT_121529 [Branchiostoma floridae]
Length = 320
Score = 258 bits (660), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 118/166 (71%), Positives = 145/166 (87%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLKKIALHARNAEYNP RF+AV MRI++P+TTALIFSSGK+VCT
Sbjct: 155 PQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIRDPRTTALIFSSGKMVCT 214
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L HA FS+
Sbjct: 215 GAKSEDQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHAQFSS 274
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPELFPGLIYRM KP + +LIF+SGKVV+TGA+A + ++++
Sbjct: 275 YEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAQACAETLGEWHSL 320
>gi|255579166|ref|XP_002530430.1| TATA-box binding protein, putative [Ricinus communis]
gi|223530038|gb|EEF31961.1| TATA-box binding protein, putative [Ricinus communis]
Length = 193
Score = 258 bits (659), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 117/171 (68%), Positives = 150/171 (87%), Gaps = 1/171 (0%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
PV+QNI +T+NL+CKLDLK+IALH+ N+EY+P RFSAVTMRI+ P+TTALIF+SG++VCT
Sbjct: 18 PVLQNIASTVNLDCKLDLKRIALHSLNSEYDPKRFSAVTMRIRHPQTTALIFASGRVVCT 77
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLER-LNGFHAMFS 121
GAK+E +KLA RK+ARIVQK+GFP +FKDFKIQNIV SCD++FP++LE+ + HA FS
Sbjct: 78 GAKTEEDSKLAMRKFARIVQKLGFPAKFKDFKIQNIVASCDMKFPLRLEKFIYTKHAAFS 137
Query: 122 TYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEP++FPGLIYRMK+ + MLIF+SGKVVITGAK ++ +AAF+NIYPVL
Sbjct: 138 RYEPDVFPGLIYRMKESRIIMLIFVSGKVVITGAKKTDEAFAAFDNIYPVL 188
>gi|44967798|gb|AAS49578.1| TATA box binding protein (TBP)-associated factor [Protopterus
dolloi]
Length = 250
Score = 258 bits (659), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 119/162 (73%), Positives = 141/162 (87%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 89 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 148
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 149 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 208
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIY 162
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY
Sbjct: 209 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIY 250
>gi|358335036|dbj|GAA53489.1| transcription initiation factor TFIID TATA-box-binding protein
[Clonorchis sinensis]
Length = 436
Score = 257 bits (657), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 121/178 (67%), Positives = 147/178 (82%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV T+ L CKL+LK+IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 245 PQLQNIVCTVYLGCKLNLKQIALSARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 304
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE +A+LAARKYARI+QK+GF FK+FKIQN+VGSCDV F I+LE L F+T
Sbjct: 305 GAKSEERARLAARKYARIIQKLGFEAHFKEFKIQNMVGSCDVRFHIRLEGLVLAQGQFAT 364
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYDQ 180
YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK R++IY AF NIYP+L + D+
Sbjct: 365 YEPELFPGLIYRMTKPKIVLLIFVSGKIVLTGAKVRDEIYEAFRNIYPILKNFRKPDK 422
>gi|302508189|ref|XP_003016055.1| hypothetical protein ARB_05452 [Arthroderma benhamiae CBS 112371]
gi|291179624|gb|EFE35410.1| hypothetical protein ARB_05452 [Arthroderma benhamiae CBS 112371]
Length = 295
Score = 257 bits (656), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 125/201 (62%), Positives = 150/201 (74%), Gaps = 24/201 (11%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPS------------------------R 36
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP R
Sbjct: 80 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKVGAGEVACLLFSFHTQVKIYILFVR 139
Query: 37 FSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQ 96
F+AV MRI+EPKTTALIF+SGK+V TGAKSE +KLA+RKYARI+QK+GF +F DFKIQ
Sbjct: 140 FAAVIMRIREPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQ 199
Query: 97 NIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAK 156
NIVGSCD++FPI+LE L H FS+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK
Sbjct: 200 NIVGSCDIKFPIRLEGLASRHHNFSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAK 259
Query: 157 AREQIYAAFNNIYPVLNVYVT 177
RE+IY AF IYPVL +T
Sbjct: 260 VREEIYQAFEMIYPVLTGMLT 280
>gi|167899|gb|AAA33256.1| TFIID [Dictyostelium discoideum]
Length = 205
Score = 256 bits (655), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 119/173 (68%), Positives = 144/173 (83%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+N+ +L LK IAL ARNAEYNP RF+AV MRI+EPKTTALIF SGK+VCT
Sbjct: 25 PTLQNIVSTVNMATELYLKAIALGARNAEYNPKRFAAVIMRIREPKTTALIFKSGKMVCT 84
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++ AARKYARI+QK+ FP +F DFKIQNIVGSCDV+FPIKLE L+ H F+
Sbjct: 85 GAKSEDASRFAARKYARIIQKLDFPARFTDFKIQNIVGSCDVKFPIKLELLHNAHTSFTN 144
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPE+FPGLIY+M +P V +LIF+SGK+V+TGAK RE IY AF NIYPVL+ +
Sbjct: 145 YEPEIFPGLIYKMIQPKVLLLIFVSGKIVLTGAKVREYIYEAFENIYPVLSAF 197
>gi|79313217|ref|NP_001030688.1| TATA-box-binding protein 1 [Arabidopsis thaliana]
gi|332641835|gb|AEE75356.1| TATA-box-binding protein 1 [Arabidopsis thaliana]
Length = 196
Score = 256 bits (655), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 120/165 (72%), Positives = 140/165 (84%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL+CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 21 IVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 80
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE +K+AARKYARIVQK+GFP +FKDFKIQNIVGSCDV+FPI+LE L HA F
Sbjct: 81 CTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHAAF 140
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAF 165
S+YEPELFPGLIYRMK P + +LIF+SGK+VITGAK F
Sbjct: 141 SSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKVISHFSLGF 185
>gi|300701392|ref|XP_002994966.1| hypothetical protein NCER_102344 [Nosema ceranae BRL01]
gi|239603310|gb|EEQ81295.1| hypothetical protein NCER_102344 [Nosema ceranae BRL01]
Length = 199
Score = 256 bits (654), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 117/175 (66%), Positives = 144/175 (82%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P++QN+VAT+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 22 ITPILQNVVATVNLNCKLDLKNIALRARNAEYNPKRFAAVIMRIREPKTTALIFASGKVV 81
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE Q+KLAA++Y++I+ K+GF F DFKIQNIV SCD +F I+LE L H+ +
Sbjct: 82 ITGAKSEKQSKLAAQRYSKIINKLGFNADFNDFKIQNIVSSCDTKFSIRLEGLAYSHSNY 141
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK R+ IY AF NIYPVL Y
Sbjct: 142 CSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVRDDIYQAFENIYPVLTQY 196
>gi|429962646|gb|ELA42190.1| TATA-box-binding protein [Vittaforma corneae ATCC 50505]
Length = 197
Score = 255 bits (651), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 118/175 (67%), Positives = 146/175 (83%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ PV+QN+VAT+NL CKLDL+ IAL ARNAEYNP RF+AV MRI++PKTTALIF+SGK+V
Sbjct: 20 ITPVLQNVVATVNLNCKLDLRSIALRARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMV 79
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +K+A+++YA+I+ K+GF QF DFKIQNIV SCD++F IKLE L H+ F
Sbjct: 80 VTGAKSEKASKMASQRYAKIISKLGFNAQFTDFKIQNIVSSCDLKFCIKLEGLAYAHSNF 139
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE IY AF+NIYPVL Y
Sbjct: 140 CSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVREDIYEAFDNIYPVLTQY 194
>gi|405952231|gb|EKC20068.1| TATA-box-binding protein [Crassostrea gigas]
Length = 452
Score = 254 bits (650), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 121/159 (76%), Positives = 138/159 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV T+NL CKLDLKKIALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 95 LRPQLQNIVCTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 154
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE QAKLAARKYARIVQK+GF +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 155 CTGAKSEDQAKLAARKYARIVQKLGFAAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQF 214
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKARE 159
S+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK E
Sbjct: 215 SSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKDWE 253
>gi|6063008|gb|AAF03091.1|AF144035_1 transcription initiation factor TFIID [Antonospora locustae]
Length = 259
Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 117/173 (67%), Positives = 144/173 (83%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QN+VAT+NL CKLDLK IAL ARNAEYNP RF+AV MRI++PKTTALIF+SGK+V T
Sbjct: 84 PALQNVVATVNLNCKLDLKAIALRARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMVVT 143
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE +KLAA+K++RI+ K+GF +F DFKIQNIV SCD +F I+LE L H+ F +
Sbjct: 144 GAKSEQTSKLAAQKFSRIIHKLGFNTKFADFKIQNIVSSCDTQFSIRLEGLAFAHSNFCS 203
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK R++IY AF+NIYPVL Y
Sbjct: 204 YEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKMRDEIYEAFDNIYPVLTQY 256
>gi|169806112|ref|XP_001827801.1| transcription initiation factor TFIID [Enterocytozoon bieneusi
H348]
gi|161779087|gb|EDQ31113.1| transcription initiation factor TFIID [Enterocytozoon bieneusi
H348]
Length = 233
Score = 254 bits (648), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 115/175 (65%), Positives = 146/175 (83%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
M P++QN+VAT+NL CKLDLK IALHARNAEYNP +F+AV MRI+EPKTTALIF+SGK+V
Sbjct: 56 MVPILQNVVATVNLNCKLDLKSIALHARNAEYNPKKFAAVIMRIREPKTTALIFASGKMV 115
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +++A+++Y++I+QK+GF V F F +QNIV SCD++FPIKLE L H+ +
Sbjct: 116 VTGAKSEKASRIASQRYSKIIQKLGFSVYFDSFTVQNIVSSCDLKFPIKLEGLAYAHSNY 175
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE I+ AF NIYPVL Y
Sbjct: 176 CSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKKREDIFEAFENIYPVLTQY 230
>gi|1174643|sp|P46272.1|TBP_ACECL RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; Short=TBP; AltName:
Full=TATA-binding factor; AltName: Full=TATA-box factor;
AltName: Full=Transcription initiation factor TFIID TBP
subunit
gi|2654376|emb|CAA82267.1| TATA box binding protein [Acetabularia peniculus]
Length = 191
Score = 254 bits (648), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 116/173 (67%), Positives = 144/173 (83%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QN+V+T+NL C L+LK+IA+ ARNAEYNP RF+AV MRI++PKTTALIF SGK+VCT
Sbjct: 16 PELQNVVSTVNLGCTLELKEIAMQARNAEYNPKRFAAVIMRIRDPKTTALIFGSGKMVCT 75
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE ++ AARKYA+IVQK+GFP +F +FKIQNIVGSCDV+FPI++E L H F +
Sbjct: 76 GAKSEQDSRTAARKYAKIVQKLGFPAKFTEFKIQNIVGSCDVKFPIRMEPLAYQHQQFCS 135
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM +P + +LIF+SGKVV+TGAK R +IY AF IYPVL +
Sbjct: 136 YEPELFPGLIYRMLQPKIVLLIFVSGKVVLTGAKERTEIYRAFEQIYPVLTQF 188
>gi|396081293|gb|AFN82911.1| eukaryotic TATA box binding transcription initiation factor TFIID-1
[Encephalitozoon romaleae SJ-2008]
Length = 198
Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 117/173 (67%), Positives = 143/173 (82%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QN+VAT+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V T
Sbjct: 23 PTLQNVVATVNLNCKLDLKNIALRARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVIT 82
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE +K+AA++YA+I+ K+GF F DFKIQNIV SCD++F I+LE L H+ + +
Sbjct: 83 GAKSEKSSKMAAQRYAKIIHKLGFNATFDDFKIQNIVSSCDIKFSIRLEGLAYAHSNYCS 142
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK R+ IY AFNNIYPVL Y
Sbjct: 143 YEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVRDDIYQAFNNIYPVLIQY 195
>gi|401826152|ref|XP_003887170.1| TATA-box binding protein [Encephalitozoon hellem ATCC 50504]
gi|392998328|gb|AFM98189.1| TATA-box binding protein [Encephalitozoon hellem ATCC 50504]
Length = 198
Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 117/173 (67%), Positives = 143/173 (82%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QN+VAT+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V T
Sbjct: 23 PTLQNVVATVNLNCKLDLKNIALRARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVIT 82
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE +K+AA++YA+I+ K+GF F DFKIQNIV SCD++F I+LE L H+ + +
Sbjct: 83 GAKSEKSSKMAAQRYAKIIHKLGFNATFDDFKIQNIVSSCDIKFSIRLEGLAYAHSNYCS 142
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK R+ IY AFNNIYPVL Y
Sbjct: 143 YEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVRDDIYQAFNNIYPVLIQY 195
>gi|429964398|gb|ELA46396.1| TATA-box-binding protein [Vavraia culicis 'floridensis']
Length = 201
Score = 253 bits (645), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 116/175 (66%), Positives = 144/175 (82%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QN+VAT+NLEC+L+LK IAL ARNAEYNP RF+AV MRI++PKTTALIF+SGK+V
Sbjct: 24 ITPTLQNVVATVNLECRLELKVIALRARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMV 83
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +++AA+KYARI+ K+GF QF DFKIQNIV SCD +F I+LE L H+ F
Sbjct: 84 ITGAKSEQASRIAAKKYARIIHKLGFNTQFSDFKIQNIVSSCDTKFNIRLEGLAYAHSNF 143
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
+YEPELFPGLIYRM P + +LIF+SGK+V+TGAK R++IY AF NIYPVL Y
Sbjct: 144 CSYEPELFPGLIYRMVNPKIVLLIFVSGKIVLTGAKVRDEIYQAFENIYPVLTKY 198
>gi|44967740|gb|AAS49577.1| TATA box binding protein (TBP)-associated factor [Latimeria
chalumnae]
Length = 249
Score = 253 bits (645), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 117/162 (72%), Positives = 139/162 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 88 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 147
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H
Sbjct: 148 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQS 207
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIY 162
S+YEPELFPGLIYRM KP + +L F+SGKVV+TGAK R +IY
Sbjct: 208 SSYEPELFPGLIYRMIKPRIVLLXFVSGKVVLTGAKVRAEIY 249
>gi|19074223|ref|NP_584829.1| TRANSCRIPTION INITIATION FACTOR TFIID (TFIID-1 [Encephalitozoon
cuniculi GB-M1]
gi|19068865|emb|CAD25333.1| TRANSCRIPTION INITIATION FACTOR TFIID (TFIID-1 [Encephalitozoon
cuniculi GB-M1]
gi|449329027|gb|AGE95302.1| transcription initiation factor tfIId [Encephalitozoon cuniculi]
Length = 198
Score = 252 bits (644), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 115/170 (67%), Positives = 142/170 (83%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QN+VAT+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V T
Sbjct: 23 PTLQNVVATVNLSCKLDLKNIALRARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVIT 82
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE +++AA++YA+I+ K+GF F DFKIQNIV SCD++F I+LE L H+ + +
Sbjct: 83 GAKSEKSSRMAAQRYAKIIHKLGFNATFDDFKIQNIVSSCDIKFSIRLEGLAYAHSNYCS 142
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK R+ IY AFNNIYPVL
Sbjct: 143 YEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVRDDIYQAFNNIYPVL 192
>gi|309252549|gb|ADO60139.1| TATA-binding protein, partial [Beauveria bassiana]
Length = 159
Score = 252 bits (644), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 116/159 (72%), Positives = 138/159 (86%)
Query: 7 NIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKS 66
NIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V TGAKS
Sbjct: 1 NIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVTGAKS 60
Query: 67 ESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPE 126
E +KLA+RKYARI+QK+GF +F DFKIQNIVGSCD++FPI+LE L H FS+YEPE
Sbjct: 61 EDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASRHHNFSSYEPE 120
Query: 127 LFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAF 165
LFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY A
Sbjct: 121 LFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAL 159
>gi|303389118|ref|XP_003072792.1| eukaryotic TATA box binding transcription initiation factor TFIID-1
[Encephalitozoon intestinalis ATCC 50506]
gi|303301934|gb|ADM11432.1| eukaryotic TATA box binding transcription initiation factor TFIID-1
[Encephalitozoon intestinalis ATCC 50506]
Length = 198
Score = 252 bits (643), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 115/170 (67%), Positives = 142/170 (83%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QN+VAT+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V T
Sbjct: 23 PTLQNVVATVNLNCKLDLKNIALRARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVIT 82
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE +++AA++YA+I+ K+GF F DFKIQNIV SCD++F I+LE L H+ + +
Sbjct: 83 GAKSEKSSRMAAQRYAKIIHKLGFNATFDDFKIQNIVSSCDIKFSIRLEGLAYAHSNYCS 142
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK R+ IY AFNNIYPVL
Sbjct: 143 YEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVRDDIYRAFNNIYPVL 192
>gi|339961266|pdb|3OC3|C Chain C, Crystal Structure Of The Mot1 N-Terminal Domain In Complex
With Tbp
gi|339961267|pdb|3OC3|D Chain D, Crystal Structure Of The Mot1 N-Terminal Domain In Complex
With Tbp
gi|339961268|pdb|3OCI|A Chain A, Crystal Structure Of Tbp (Tata Box Binding Protein)
gi|339961269|pdb|3OCI|B Chain B, Crystal Structure Of Tbp (Tata Box Binding Protein)
Length = 218
Score = 252 bits (643), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 115/170 (67%), Positives = 142/170 (83%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QN+VAT+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V T
Sbjct: 43 PTLQNVVATVNLSCKLDLKNIALRARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVIT 102
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE +++AA++YA+I+ K+GF F DFKIQNIV SCD++F I+LE L H+ + +
Sbjct: 103 GAKSEKSSRMAAQRYAKIIHKLGFNATFDDFKIQNIVSSCDIKFSIRLEGLAYAHSNYCS 162
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK R+ IY AFNNIYPVL
Sbjct: 163 YEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVRDDIYQAFNNIYPVL 212
>gi|259090139|pdb|3EIK|A Chain A, Double Stranded Dna Binding Protein
gi|259090140|pdb|3EIK|B Chain B, Double Stranded Dna Binding Protein
Length = 218
Score = 252 bits (643), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 115/170 (67%), Positives = 142/170 (83%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QN+VAT+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V T
Sbjct: 43 PTLQNVVATVNLSCKLDLKNIALRARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVIT 102
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE +++AA++YA+I+ K+GF F DFKIQNIV SCD++F I+LE L H+ + +
Sbjct: 103 GAKSEKSSRMAAQRYAKIIHKLGFNATFDDFKIQNIVSSCDIKFSIRLEGLAYAHSNYCS 162
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK R+ IY AFNNIYPVL
Sbjct: 163 YEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVRDDIYQAFNNIYPVL 212
>gi|440494309|gb|ELQ76708.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Trachipleistophora hominis]
Length = 234
Score = 251 bits (642), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 116/175 (66%), Positives = 144/175 (82%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QN+VAT+NLEC+L+LK IAL ARNAEYNP RF+AV MRI++PKTTALIF+SGK+V
Sbjct: 57 ITPTLQNVVATVNLECRLELKVIALRARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMV 116
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE +++AA+KYARI+ K+GF QF DFKIQNIV SCD +F I+LE L H+ F
Sbjct: 117 ITGAKSEQASRIAAKKYARIIHKLGFNTQFSDFKIQNIVSSCDTKFNIRLEGLAYAHSNF 176
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
+YEPELFPGLIYRM P + +LIF+SGK+V+TGAK R++IY AF NIYPVL Y
Sbjct: 177 CSYEPELFPGLIYRMVNPKIVLLIFVSGKIVLTGAKVRDEIYQAFENIYPVLTKY 231
>gi|402588148|gb|EJW82082.1| TATA box binding protein [Wuchereria bancrofti]
Length = 198
Score = 251 bits (642), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 121/178 (67%), Positives = 145/178 (81%), Gaps = 4/178 (2%)
Query: 2 APVIQNIVATINL----ECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSG 57
+P +QNIV+T+NL +C +KIALHARNAEYNP RF+AV MRI+EP+TTALIFSSG
Sbjct: 19 SPALQNIVSTVNLGESLKCAAGFEKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSG 78
Query: 58 KIVCTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFH 117
K+VCTGAKSE ++LAARKYARIVQK+GF +F +FK+QN+VGSCDV FPI+LE L H
Sbjct: 79 KMVCTGAKSEESSRLAARKYARIVQKLGFNAKFTEFKVQNMVGSCDVRFPIQLEGLCLTH 138
Query: 118 AMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
FSTYEPELFPGLIYRM KP V +LIF+SGKVVITGAK ++ I AFN IYP+L +
Sbjct: 139 TQFSTYEPELFPGLIYRMVKPRVVLLIFVSGKVVITGAKYKKDIDDAFNQIYPILKGF 196
>gi|440902256|gb|ELR53068.1| TATA-box-binding protein, partial [Bos grunniens mutus]
Length = 247
Score = 251 bits (641), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 113/162 (69%), Positives = 138/162 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P + N+V T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTAL+FSSGK+V
Sbjct: 86 LVPQLHNVVCTVNLGCKLDLKSIALLARNAEYNPKRFAAVIMRIREPRTTALLFSSGKMV 145
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTG KSE Q++LAARKYARI+QK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 146 CTGGKSEEQSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEPLVLSHQQF 205
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIY 162
++YEPELFPGL+YRM KP + +LIF+SGKVV+TGAK R +IY
Sbjct: 206 ASYEPELFPGLVYRMIKPRIVLLIFVSGKVVLTGAKVRSEIY 247
>gi|449543430|gb|EMD34406.1| hypothetical protein CERSUDRAFT_97665 [Ceriporiopsis subvermispora
B]
Length = 338
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 124/195 (63%), Positives = 149/195 (76%), Gaps = 23/195 (11%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNP----------SRFSAVTMRIKEPKTT 50
+ P +QNIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI++PKTT
Sbjct: 138 IVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKWPDFRVCALQRFAAVIMRIRDPKTT 197
Query: 51 ALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKL 110
ALIF+SGK+V TGAKSE ++LA+RKYARIVQK+GF +F +FKIQNIVGSCDV+FPI+L
Sbjct: 198 ALIFASGKMVVTGAKSEDDSRLASRKYARIVQKLGFDAKFSEFKIQNIVGSCDVKFPIRL 257
Query: 111 ERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAK-------------A 157
E L H FS+YEPELFPGLIYRM KP V +LIF+SGK+V+TGAK +
Sbjct: 258 EGLAYSHGQFSSYEPELFPGLIYRMIKPKVVLLIFVSGKIVLTGAKVKPGFSYREASPPS 317
Query: 158 REQIYAAFNNIYPVL 172
RE+IY AFN IY VL
Sbjct: 318 REEIYTAFNTIYTVL 332
>gi|308809792|ref|XP_003082205.1| transcription initiation factor tbp1-maize (ISS) [Ostreococcus
tauri]
gi|116060673|emb|CAL57151.1| transcription initiation factor tbp1-maize (ISS) [Ostreococcus
tauri]
Length = 258
Score = 249 bits (635), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 119/193 (61%), Positives = 143/193 (74%), Gaps = 21/193 (10%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPS---------------------RFSAVTM 42
V +NIVAT+NL+CKLDLK IA HARN EYNP RF+A M
Sbjct: 48 VRRNIVATVNLDCKLDLKTIAFHARNVEYNPKVRRATRAPTLGEPTRRDENDFRFAAAIM 107
Query: 43 RIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSC 102
RI+ PKTTALIFSSGK+VCTGAK+E+ A+ AARKYA+++ K+GFP QFKDFKIQN+VGSC
Sbjct: 108 RIRNPKTTALIFSSGKMVCTGAKTEALAREAARKYAKVIIKLGFPAQFKDFKIQNMVGSC 167
Query: 103 DVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIY 162
DV+FPI+LE L H F+ YEPELFPGLIYRM+ P + +LIF+SGK+V+TG K RE IY
Sbjct: 168 DVQFPIRLEGLAWQHGHFAQYEPELFPGLIYRMQMPKIVLLIFVSGKIVLTGGKRREDIY 227
Query: 163 AAFNNIYPVLNVY 175
AF NIYPVL +
Sbjct: 228 QAFENIYPVLTEF 240
>gi|242039091|ref|XP_002466940.1| hypothetical protein SORBIDRAFT_01g017130 [Sorghum bicolor]
gi|241920794|gb|EER93938.1| hypothetical protein SORBIDRAFT_01g017130 [Sorghum bicolor]
Length = 225
Score = 248 bits (634), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 115/171 (67%), Positives = 144/171 (84%), Gaps = 1/171 (0%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDL++IA ARNAEYNP RF+AV +RI++PKTTAL+F+SGK+VCT
Sbjct: 44 PTLQNIVSTVNLGCKLDLQQIASGARNAEYNPKRFAAVIVRIRDPKTTALVFASGKMVCT 103
Query: 63 GAKSESQAKLAARKYARIVQKIGF-PVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFS 121
GAKSE ++LA RK+ARIV K+GF +FKDFKIQNIVGSCDV+FPI+LE L F+
Sbjct: 104 GAKSEEHSRLAGRKFARIVHKLGFQSARFKDFKIQNIVGSCDVKFPIRLEGLALASGTFA 163
Query: 122 TYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPE+FPGLIYRM +P + +LIF+SGK+V+TGAK RE+IY AF NIYP+L
Sbjct: 164 NYEPEIFPGLIYRMVEPKIVILIFVSGKIVLTGAKVREEIYTAFENIYPML 214
>gi|297478910|ref|XP_002690449.1| PREDICTED: TATA-box-binding protein, partial [Bos taurus]
gi|296483816|tpg|DAA25931.1| TPA: TATA box binding protein-like [Bos taurus]
Length = 227
Score = 248 bits (632), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 115/155 (74%), Positives = 136/155 (87%)
Query: 6 QNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAK 65
+NIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCTGAK
Sbjct: 73 ENIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAK 132
Query: 66 SESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEP 125
SE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H FS+YEP
Sbjct: 133 SEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEP 192
Query: 126 ELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQ 160
ELFPGLIYRM KP + +LIF+SGKVV+TGAK R +
Sbjct: 193 ELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAE 227
>gi|413933837|gb|AFW68388.1| hypothetical protein ZEAMMB73_647229, partial [Zea mays]
Length = 189
Score = 248 bits (632), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 111/172 (64%), Positives = 146/172 (84%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL+CK+DL+ +A ARNAEYNP RF A MRI+EPKTTALIF++GK+V
Sbjct: 13 IVPNLQNIVSTVNLDCKVDLQHVANSARNAEYNPRRFGAAIMRIREPKTTALIFATGKMV 72
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE+ ++LAARK+ARIVQK+GFP +FKDFK+QNIVGSCD++FPI+LE L +
Sbjct: 73 CTGAKSEADSRLAARKFARIVQKLGFPARFKDFKVQNIVGSCDLKFPIRLEGLALASGLS 132
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
+TYEPE+FPGL+YRM P V +L+F+SGK+V+TGAK +E+I AAF I+P+L
Sbjct: 133 ATYEPEIFPGLVYRMVDPKVVILVFVSGKIVLTGAKVQEEICAAFEKIHPML 184
>gi|14423952|sp|Q9NHP5.1|TBP_DROVI RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; AltName: Full=TATA-binding
factor; AltName: Full=TATA-box factor; AltName:
Full=Transcription initiation factor TFIID TBP subunit
gi|8050582|gb|AAF71711.1|AF220262_1 TATA box-binding protein [Drosophila virilis]
Length = 349
Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 115/173 (66%), Positives = 141/173 (81%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLKKIALHARNAEYNP RF+ V MRI+EP+TTALIFSSGK+VCT
Sbjct: 173 PQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAPVIMRIREPRTTALIFSSGKMVCT 232
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAK E ++LAARKYARI+QK+GF +F D KIQN+VG CDV+FPI+LE L H FS
Sbjct: 233 GAKGEDDSRLAARKYARIIQKLGFRAKFLDLKIQNMVGLCDVKFPIRLEGLVLTHCNFSR 292
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGLIYRM +P + +L+ GKVV+TGAK R++IY AF+ I+ +L +
Sbjct: 293 YEPELFPGLIYRMVRPRIVLLLPAPGKVVLTGAKVRQEIYDAFDKIFSILKKF 345
>gi|387592277|gb|EIJ87301.1| TATA-box binding protein [Nematocida parisii ERTm3]
gi|387596323|gb|EIJ93945.1| TATA-box binding protein [Nematocida parisii ERTm1]
Length = 189
Score = 247 bits (630), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 114/175 (65%), Positives = 147/175 (84%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P IQNIVAT+NL C+LDLK IAL ARNAEYNP RF+AV +RI++P+TTALIF+SGK+V
Sbjct: 12 LVPTIQNIVATVNLCCRLDLKAIALGARNAEYNPKRFAAVIIRIRKPRTTALIFASGKMV 71
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGA+SE +K+AA+KY+ I++++G+PV+F +FKIQNIV SCD +F I+LE L H+ +
Sbjct: 72 VTGARSEEDSKIAAKKYSIIIRRLGYPVRFTEFKIQNIVSSCDTKFSIRLEGLVFGHSNY 131
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPELFPGLIYRM KP + +L+F+SGKVV+TGAK RE+IY AF NIYPVL Y
Sbjct: 132 SSYEPELFPGLIYRMVKPKIVLLVFVSGKVVLTGAKHREEIYQAFENIYPVLKQY 186
>gi|424513557|emb|CCO66179.1| predicted protein [Bathycoccus prasinos]
Length = 289
Score = 246 bits (629), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 119/208 (57%), Positives = 145/208 (69%), Gaps = 33/208 (15%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNP-------------------------- 34
+ P +QNIVAT+NL+CKLDLK IA HARN EYNP
Sbjct: 46 IVPTLQNIVATVNLDCKLDLKTIAFHARNVEYNPKVCRAVGGKEIVKTDAFLHHSFHQTF 105
Query: 35 -------SRFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGFP 87
RF+A MRI+ PKTTALIF+SGK+VCTGAK+E+ A+ AARKYA+++ K+GFP
Sbjct: 106 RCALLNKQRFAAAIMRIRNPKTTALIFASGKMVCTGAKTEALAREAARKYAKVIIKLGFP 165
Query: 88 VQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLS 147
QFKDFKIQN+VGSCDV+FPI+LE L H F+ YEPELFPGLIYRM+ P + +LIF+S
Sbjct: 166 AQFKDFKIQNMVGSCDVKFPIRLEGLAWSHGHFAQYEPELFPGLIYRMQMPKIVLLIFVS 225
Query: 148 GKVVITGAKAREQIYAAFNNIYPVLNVY 175
GK+V+TG K RE IY AF NIYPVL +
Sbjct: 226 GKIVLTGGKRREDIYQAFENIYPVLTEF 253
>gi|402470285|gb|EJW04618.1| TATA-box-binding protein [Edhazardia aedis USNM 41457]
Length = 198
Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 115/171 (67%), Positives = 140/171 (81%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P+IQN+VAT+NL L L+ IA RNAEYNP RF+AV MRI+EPKTTALIFSSGK+V T
Sbjct: 23 PIIQNVVATVNLGHHLTLQDIAYKTRNAEYNPKRFAAVIMRIREPKTTALIFSSGKMVVT 82
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE+ + AARK+ARI+QK GFP +FKD+KIQNIV SCD++F ++LE L H + +
Sbjct: 83 GAKSEASSMFAARKFARIIQKAGFPAKFKDYKIQNIVSSCDIKFNVRLEGLAFMHGPYCS 142
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
YEPELFPGLIYRM KP + +LIF+SGK+VITGAKARE+IY AF +IYPVL
Sbjct: 143 YEPELFPGLIYRMVKPKIVLLIFVSGKIVITGAKAREEIYQAFESIYPVLT 193
>gi|118352110|ref|XP_001009328.1| TATA-box binding protein [Tetrahymena thermophila]
gi|89291095|gb|EAR89083.1| TATA-box binding protein [Tetrahymena thermophila SB210]
Length = 246
Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 140/179 (78%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL KLDLK+IAL ARNAEYNP RF+AV MR+++PKTTALIF+SGK+V
Sbjct: 49 LYPKLQNIVSTVNLSTKLDLKQIALRARNAEYNPKRFAAVIMRLRDPKTTALIFASGKMV 108
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAK+E + AARKYA+I+QKIGFPVQFKDFKIQNIVGS DV+FPI L+ L H F
Sbjct: 109 CTGAKTEEDSNRAARKYAKIIQKIGFPVQFKDFKIQNIVGSTDVKFPINLDHLEQDHKKF 168
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYD 179
YEPE+FPGLIYR + +LIF+SGK+V+TGAK RE I AF IY VL Y D
Sbjct: 169 VQYEPEIFPGLIYREFNTKIVLLIFVSGKIVLTGAKTRENINKAFQKIYWVLYNYQKKD 227
>gi|164656154|ref|XP_001729205.1| hypothetical protein MGL_3672 [Malassezia globosa CBS 7966]
gi|159103095|gb|EDP41991.1| hypothetical protein MGL_3672 [Malassezia globosa CBS 7966]
Length = 257
Score = 244 bits (624), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 112/157 (71%), Positives = 136/157 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NLE +LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 73 IVPTLQNIVATVNLEARLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 132
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE ++LA+RKYARI+QK+GF +F +FKIQNIVGSCDV FPI+LE L H ++
Sbjct: 133 ITGAKSEDDSRLASRKYARIIQKLGFEARFSEFKIQNIVGSCDVRFPIRLEGLAYSHGVY 192
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKA 157
S+YEPELFPGLIYRM KP V +LIF+SGK+V+TGAK+
Sbjct: 193 SSYEPELFPGLIYRMVKPKVVLLIFVSGKIVLTGAKS 229
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 95 IQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITG 154
+QNIV + ++E + L+ + HA + Y P+ F +I R+++P T LIF SGK+VITG
Sbjct: 77 LQNIVATVNLEARLDLKTI-ALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVITG 135
Query: 155 AKAREQ 160
AK+ +
Sbjct: 136 AKSEDD 141
>gi|428176634|gb|EKX45518.1| hypothetical protein GUITHDRAFT_152740 [Guillardia theta CCMP2712]
Length = 212
Score = 244 bits (624), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 114/175 (65%), Positives = 140/175 (80%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL C L+LK I L ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 26 ITPSLQNIVATVNLNCSLNLKTITLQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 85
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE A+LA+RK+ARI+QK+GF +F +FKIQNIVGSCDV FPI+LE+L H +
Sbjct: 86 CTGAKSEESARLASRKFARIIQKLGFSAKFTEFKIQNIVGSCDVRFPIRLEKLAYAHQNY 145
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
+YEPELFPGLIYRM P V +LIF+SGK+V+TGAK + I AF IY L+ +
Sbjct: 146 CSYEPELFPGLIYRMLVPKVVLLIFVSGKIVLTGAKNKRDIDIAFRTIYHTLHEF 200
>gi|3122945|sp|Q27850.1|TBP_TETTH RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; Short=TBP; AltName:
Full=TATA-binding factor; AltName: Full=TATA-box factor;
AltName: Full=Transcription initiation factor TFIID TBP
subunit
gi|349811|gb|AAC14470.1| TATA-binding protein [Tetrahymena thermophila]
Length = 246
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 139/179 (77%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL KLDLK+IAL ARNAEYNP RF+AV MR+++PKTTALIF+SGK+V
Sbjct: 49 LYPKLQNIVSTVNLSTKLDLKQIALRARNAEYNPKRFAAVIMRLRDPKTTALIFASGKMV 108
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAK+E + AARKYA+I+QKIGFPVQFKDFKIQNIVGS DV+FPI L+ L H F
Sbjct: 109 CTGAKTEEDSNRAARKYAKIIQKIGFPVQFKDFKIQNIVGSTDVKFPINLDHLEQDHKKF 168
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYD 179
YEPE+FPG IYR + +LIF+SGK+V+TGAK RE I AF IY VL Y D
Sbjct: 169 VQYEPEIFPGKIYREFNTKIVLLIFVSGKIVLTGAKTRENINKAFQKIYWVLYNYQKKD 227
>gi|399949933|gb|AFP65589.1| TATA binding protein of transcription factor IID [Chroomonas
mesostigmatica CCMP1168]
Length = 262
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/174 (67%), Positives = 140/174 (80%), Gaps = 1/174 (0%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P IQN+V+T+NL +LDLK+IAL RNAEYNP RF+AV MRI++PKTTALIFSSGK+V T
Sbjct: 86 PDIQNVVSTVNLGIQLDLKRIALKTRNAEYNPRRFAAVVMRIRDPKTTALIFSSGKMVIT 145
Query: 63 GAKSESQAKLAARKYARIVQKIGF-PVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFS 121
GAKSE AKL +KYARI+QKIG+ ++F DFKIQNIV SCD +FPI+LE L H F
Sbjct: 146 GAKSEETAKLGGKKYARIIQKIGYGHIKFLDFKIQNIVASCDTKFPIRLESLAHAHNQFC 205
Query: 122 TYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
+YEPELFPGLIYRM P V +LIF+SGK+V+TGAK R IY AFNNIY VL ++
Sbjct: 206 SYEPELFPGLIYRMISPKVVLLIFVSGKLVLTGAKQRNDIYQAFNNIYAVLCLF 259
>gi|443925999|gb|ELU44748.1| transcription initiation factor TFIID-1 [Rhizoctonia solani AG-1
IA]
Length = 985
Score = 242 bits (618), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 111/150 (74%), Positives = 132/150 (88%)
Query: 7 NIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKS 66
NIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI++PKTTALIF+SGK+V TGAKS
Sbjct: 73 NIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMVVTGAKS 132
Query: 67 ESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPE 126
E ++LA+RKYARIVQK+GF +F +FKIQNIVGSCDV+FPI+LE L H FS+YEPE
Sbjct: 133 EDDSRLASRKYARIVQKLGFDAKFSEFKIQNIVGSCDVKFPIRLEGLAYSHGQFSSYEPE 192
Query: 127 LFPGLIYRMKKPNVTMLIFLSGKVVITGAK 156
LFPGLIYRM KP V +LIF+SGK+V+TGAK
Sbjct: 193 LFPGLIYRMLKPKVVLLIFVSGKIVLTGAK 222
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 97 NIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAK 156
NIV + +++ + L+ + HA + Y P+ F +I R++ P T LIF SGK+V+TGAK
Sbjct: 73 NIVATVNLDCRLDLKTI-ALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMVVTGAK 131
Query: 157 AREQ 160
+ +
Sbjct: 132 SEDD 135
>gi|403354886|gb|EJY77003.1| Tata box binding protein [Oxytricha trifallax]
Length = 502
Score = 241 bits (616), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 113/170 (66%), Positives = 133/170 (78%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIVAT N CKLDL++IAL+ARN EYNP RF+A MRI+EPKTTALIF SGK+VCT
Sbjct: 299 PTLQNIVATCNFGCKLDLRQIALNARNCEYNPKRFAAAIMRIREPKTTALIFQSGKMVCT 358
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAK E +++ A ++YA+ V+KIGF VQ K+FKIQN+V S D FPI LE L+ H FST
Sbjct: 359 GAKDEEKSRTACKQYAKAVRKIGFNVQMKEFKIQNVVASHDCGFPISLEGLSNEHDKFST 418
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPELFPGLIYRM P + MLIF SGK+V TGAK REQI A+ NI PVL
Sbjct: 419 YEPELFPGLIYRMASPKLVMLIFASGKIVFTGAKTREQIRDAYRNIDPVL 468
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 5 IQNIVATINLECKLDLKKIA-LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
IQN+VA+ + + L+ ++ H + + Y P F + R+ PK LIF+SGKIV TG
Sbjct: 391 IQNVVASHDCGFPISLEGLSNEHDKFSTYEPELFPGLIYRMASPKLVMLIFASGKIVFTG 450
Query: 64 AKSESQAKLAARKYARIVQK 83
AK+ Q + A R +++K
Sbjct: 451 AKTREQIRDAYRNIDPVLRK 470
>gi|331686250|gb|AED87005.1| tata box binding protein [Stylonychia lemnae]
Length = 285
Score = 241 bits (616), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 117/174 (67%), Positives = 140/174 (80%), Gaps = 1/174 (0%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
PV+QNIV+T NL KLDL+KIAL+ RNAEYNP RF+AV MRI+EPKTTALIFSSGK+VCT
Sbjct: 101 PVLQNIVSTANLGIKLDLRKIALNCRNAEYNPKRFAAVIMRIREPKTTALIFSSGKMVCT 160
Query: 63 GAKSESQAKLAARKYARIVQKIGF-PVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFS 121
GAKSE +K AA+KY++ ++K+GF V +DFKIQNIVGSCDV FPI LE L+ H FS
Sbjct: 161 GAKSEEFSKDAAKKYSKAIKKVGFEDVNMQDFKIQNIVGSCDVRFPISLESLSQEHDKFS 220
Query: 122 TYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPE+FPGLIYRM P + +LIF SGK+V+TGAK + I AFNNIYPVL +
Sbjct: 221 QYEPEIFPGLIYRMANPKIVLLIFASGKIVLTGAKNKNDITLAFNNIYPVLQKF 274
>gi|378401306|emb|CBK13156.1| TATA binding protein, partial [Oreochromis mossambicus]
Length = 247
Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 110/152 (72%), Positives = 133/152 (87%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEY+P RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 96 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYDPKRFAAVIMRIREPRTTALIFSSGKMV 155
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VG+CDV+FPI+LE L H F
Sbjct: 156 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGNCDVKFPIRLEGLVLTHQQF 215
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
S+YEPELFPGLIYRM KP + +LIF+SGKVV+
Sbjct: 216 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVL 247
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 94 KIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVIT 153
++QNIV + ++ + L+ + A + Y+P+ F +I R+++P T LIF SGK+V T
Sbjct: 99 QLQNIVSTVNLGCKLDLKTI-ALRARNAEYDPKRFAAVIMRIREPRTTALIFSSGKMVCT 157
Query: 154 GAKAREQ 160
GAK+ EQ
Sbjct: 158 GAKSEEQ 164
>gi|160331843|ref|XP_001712628.1| tfIID [Hemiselmis andersenii]
gi|159766077|gb|ABW98303.1| tfIID [Hemiselmis andersenii]
Length = 267
Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 115/174 (66%), Positives = 143/174 (82%), Gaps = 1/174 (0%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QN+V+T++L +LDLK+IAL ARNAEYNP RF+AV MRI++PKTTALIFSSGK+V T
Sbjct: 91 PDVQNVVSTVSLGIQLDLKRIALKARNAEYNPRRFAAVIMRIRDPKTTALIFSSGKMVIT 150
Query: 63 GAKSESQAKLAARKYARIVQKIGF-PVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFS 121
GAKSE AKL +KYARI+Q++G+ V+F DF+IQNIV SCDV+FPI+LE L H F
Sbjct: 151 GAKSEEAAKLGCKKYARIIQRLGYGHVKFLDFRIQNIVASCDVKFPIRLESLAHAHNQFC 210
Query: 122 TYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
+YEPELFPGLIYRM P V +LIF+SGK+V+TGAK R+ IY AFNNIY VL ++
Sbjct: 211 SYEPELFPGLIYRMITPKVVLLIFVSGKLVLTGAKERKDIYQAFNNIYAVLCLF 264
>gi|320164625|gb|EFW41524.1| Tbpl2 protein [Capsaspora owczarzaki ATCC 30864]
Length = 208
Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 113/174 (64%), Positives = 141/174 (81%), Gaps = 1/174 (0%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
PV+QN+V+T NL LDLK I + ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+VCT
Sbjct: 25 PVLQNVVSTANLGVTLDLKTITMQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCT 84
Query: 63 GAKSESQAKLAARKYARIVQKIGFP-VQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFS 121
GAKSE ++ AARK+A+I+QK+G+ +F DFKIQN+V SCDV+FPI+LE L H+ F+
Sbjct: 85 GAKSEHDSREAARKFAKIIQKVGYKNAKFLDFKIQNMVASCDVKFPIRLEGLVLGHSTFA 144
Query: 122 TYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
+YEPE+FPGL+Y M P V +LIF+SGKVV+TGAK +EQI AFNNIY VL Y
Sbjct: 145 SYEPEIFPGLVYHMVSPKVVLLIFVSGKVVLTGAKEKEQITTAFNNIYAVLKEY 198
>gi|414864598|tpg|DAA43155.1| TPA: hypothetical protein ZEAMMB73_034825 [Zea mays]
Length = 212
Score = 238 bits (607), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 112/193 (58%), Positives = 146/193 (75%), Gaps = 21/193 (10%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPS---------------------RFSA 39
+ P++QNIV+T+NLECK+DL+ +A ARNAEYNP RF+A
Sbjct: 13 IVPILQNIVSTVNLECKVDLQHVANSARNAEYNPRVCIIISAAAALFFFFFAWNYIRFAA 72
Query: 40 VTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIV 99
MRI+EPKTT LIF+SGK+VCTGAKSE+ ++LAARK+ARIVQK+G P +FKDFK+QNIV
Sbjct: 73 AIMRIREPKTTTLIFASGKMVCTGAKSEADSRLAARKFARIVQKLGSPARFKDFKVQNIV 132
Query: 100 GSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKARE 159
GSCD++FPI+LE L + +TYEPE+FPGL+YRM P V +L+F+SGK+V+TGAK RE
Sbjct: 133 GSCDLKFPIRLEGLALASGLSATYEPEIFPGLVYRMVDPKVVILVFVSGKIVLTGAKVRE 192
Query: 160 QIYAAFNNIYPVL 172
+I AAF I+P+L
Sbjct: 193 EICAAFEKIHPML 205
>gi|162605642|ref|XP_001713336.1| TATA binding protein of transcription factor IID [Guillardia theta]
gi|162605926|ref|XP_001713478.1| TATA binding protein of transcription factor IID [Guillardia theta]
gi|162606298|ref|XP_001713179.1| TATA binding protein of transcription factor IID [Guillardia theta]
gi|6690140|gb|AAF24005.1|AF083031_2 TATA binding protein of transcription factor IID [Guillardia theta]
gi|13794403|gb|AAK39780.1|AF083031_144 TATA binding protein of transcription factor IID [Guillardia theta]
gi|4583657|emb|CAB40395.1| TATA binding protein of transcription factor IID [Guillardia theta]
Length = 249
Score = 238 bits (606), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 113/176 (64%), Positives = 142/176 (80%), Gaps = 1/176 (0%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P IQN+V+T++L +LDLK+IAL ARNAEYNP RF+AV MRI++PKTTALIFSSGK+V
Sbjct: 71 ITPNIQNVVSTVSLGIQLDLKRIALKARNAEYNPRRFAAVIMRIRDPKTTALIFSSGKMV 130
Query: 61 CTGAKSESQAKLAARKYARIVQKIGF-PVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAM 119
TGAKSE A++A +KYARI+Q++G+ +F DF+IQNIV SCDV FPI+LE L H
Sbjct: 131 VTGAKSEDSARVACKKYARIIQRLGYGHAKFIDFRIQNIVASCDVRFPIRLESLAHAHNQ 190
Query: 120 FSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
F +YEPELFPGLIYRM P V +LIF+SGK+V+TGAK R I+ AF+NIY VL +Y
Sbjct: 191 FCSYEPELFPGLIYRMITPKVVLLIFVSGKLVLTGAKQRNDIFQAFSNIYSVLCLY 246
>gi|403333508|gb|EJY65856.1| Tata box binding protein [Oxytricha trifallax]
Length = 500
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 111/171 (64%), Positives = 138/171 (80%), Gaps = 1/171 (0%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P++QNIV+T NL KLDL+KIA++ RNAEYNP RF+AV MRI++PKTTALIFSSGK+VCT
Sbjct: 310 PILQNIVSTANLGMKLDLRKIAMNCRNAEYNPKRFAAVIMRIRDPKTTALIFSSGKMVCT 369
Query: 63 GAKSESQAKLAARKYARIVQKIGF-PVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFS 121
GAKSE ++ AA+KY++ ++K+GF V +DFKIQNIVGSCDV FPI LE L+ H FS
Sbjct: 370 GAKSEEFSRDAAKKYSKAIKKVGFEDVNMQDFKIQNIVGSCDVGFPISLESLSSTHEKFS 429
Query: 122 TYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPE+FPGLIYRM P + +LIF SGK+V+TGAK + I A+ NIYPVL
Sbjct: 430 QYEPEIFPGLIYRMATPKIVLLIFASGKIVLTGAKNKNDIKEAYENIYPVL 480
>gi|331213275|ref|XP_003319319.1| TATA-box-binding protein [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309298309|gb|EFP74900.1| TATA-box-binding protein [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 209
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 111/151 (73%), Positives = 129/151 (85%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NLEC+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V
Sbjct: 59 IVPTLQNIVATVNLECRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 118
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGAKSE ++LAARKYARIVQK+GF +F +FKIQNIVGSCDV FPI+LE L H F
Sbjct: 119 VTGAKSEDDSRLAARKYARIVQKLGFEAKFTEFKIQNIVGSCDVRFPIRLEGLAYNHGHF 178
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVV 151
S+YEPELFPGLIYRM K V +LIF+SGK+V
Sbjct: 179 SSYEPELFPGLIYRMNKQKVVLLIFVSGKIV 209
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 95 IQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITG 154
+QNIV + ++E + L+ + HA + Y P+ F +I R+++P T LIF SGK+V+TG
Sbjct: 63 LQNIVATVNLECRLDLKTI-ALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVTG 121
Query: 155 AKAREQ 160
AK+ +
Sbjct: 122 AKSEDD 127
>gi|196001097|ref|XP_002110416.1| hypothetical protein TRIADDRAFT_22173 [Trichoplax adhaerens]
gi|190586367|gb|EDV26420.1| hypothetical protein TRIADDRAFT_22173 [Trichoplax adhaerens]
Length = 220
Score = 236 bits (602), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 110/176 (62%), Positives = 139/176 (78%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P IQN+V+T NL+C L L+ IA ARNAEYNP RF+A+ MRI++PKTTALIFSSGKIV
Sbjct: 31 IVPQIQNVVSTFNLKCSLKLRDIASKARNAEYNPKRFAALIMRIRDPKTTALIFSSGKIV 90
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
C GAKS ++LAARK+ARI+QK+G+P +F F+IQNIVGSCDV+F I LE L H+ F
Sbjct: 91 CAGAKSPELSRLAARKHARIIQKLGYPAKFTQFQIQNIVGSCDVKFHISLEGLVVTHSHF 150
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYV 176
+YEPELFPGLIYRM +P V +L+F+SGK+V+TGAK E I AF IYP+L ++
Sbjct: 151 CSYEPELFPGLIYRMVQPKVVLLVFVSGKIVLTGAKVEEDILEAFKKIYPMLRAFM 206
>gi|330038400|ref|XP_003239586.1| TATA binding protein of transcription factor IID [Cryptomonas
paramecium]
gi|327206510|gb|AEA38688.1| TATA binding protein of transcription factor IID [Cryptomonas
paramecium]
Length = 231
Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 112/174 (64%), Positives = 141/174 (81%), Gaps = 1/174 (0%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P IQN+VAT+NL +LDLK+IA+ ARNAE+NP RF+AV MRI+EPKTTALIFSSGKIV T
Sbjct: 55 PDIQNVVATVNLGIQLDLKRIAIKARNAEFNPRRFAAVIMRIREPKTTALIFSSGKIVVT 114
Query: 63 GAKSESQAKLAARKYARIVQKIGF-PVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFS 121
GAKSE +++A +KY RI+Q++G+ +F +F+IQNIV SCDV FPI+LE L H F
Sbjct: 115 GAKSEDTSRIACKKYTRIIQRLGYGHAKFLNFRIQNIVASCDVRFPIRLESLAHAHNQFC 174
Query: 122 TYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
+YEPELFPGLIYRM P V +LIF+SGK+V+TGAK R+ IY AF+NIY VL ++
Sbjct: 175 SYEPELFPGLIYRMINPKVVLLIFVSGKLVLTGAKQRKDIYQAFSNIYAVLCLF 228
>gi|331686248|gb|AED87004.1| tata box binding protein [Sterkiella histriomuscorum]
Length = 302
Score = 235 bits (599), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 111/171 (64%), Positives = 138/171 (80%), Gaps = 1/171 (0%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P++QNIV+T NL KLDL+KIA++ RNAEYNP RF+AV MRI++PKTTALIFSSGK+VCT
Sbjct: 112 PILQNIVSTANLGMKLDLRKIAMNCRNAEYNPKRFAAVIMRIRDPKTTALIFSSGKMVCT 171
Query: 63 GAKSESQAKLAARKYARIVQKIGF-PVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFS 121
GAKSE ++ AA+KY++ ++K+GF V +DFKIQNIVGSCDV FPI LE L+ H FS
Sbjct: 172 GAKSEEFSRDAAKKYSKAIKKVGFEDVNMQDFKIQNIVGSCDVGFPISLESLSSTHEKFS 231
Query: 122 TYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPE+FPGLIYRM P + +LIF SGK+V+TGAK + I A+ NIYPVL
Sbjct: 232 QYEPEIFPGLIYRMATPKIVLLIFASGKIVLTGAKNKNDIKEAYENIYPVL 282
>gi|331686256|gb|AED87008.1| tata box binding protein [Nyctotherus ovalis]
Length = 195
Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 105/173 (60%), Positives = 141/173 (81%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P ++NIV+T+NL C+LDL+KI L A+NAEYNP RF+AV MRI+ PKTTALIFSSGKIVCT
Sbjct: 15 PRLENIVSTVNLACELDLRKITLQAKNAEYNPKRFAAVIMRIRNPKTTALIFSSGKIVCT 74
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE+ ++ AA KYA+ ++K+GF V+FK+F IQN+V SC VEF I L+ L + FST
Sbjct: 75 GAKSETDSRTAAMKYAKTIKKLGFNVKFKEFTIQNMVASCGVEFGINLDELLLSYNRFST 134
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
Y+PE+FPGLI+RM+ P + LIF SGK+++TGAK R+QI+ A++ IYP+L ++
Sbjct: 135 YDPEIFPGLIFRMEDPKIVFLIFSSGKIILTGAKQRDQIFKAYHKIYPMLTIF 187
>gi|242014208|ref|XP_002427783.1| trf2 protein, putative [Pediculus humanus corporis]
gi|212512252|gb|EEB15045.1| trf2 protein, putative [Pediculus humanus corporis]
Length = 231
Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 109/174 (62%), Positives = 135/174 (77%)
Query: 2 APVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVC 61
A +QN+VAT+NL +LDL+KI RN EYNPSRF + MRI+EPKTTALIF SGKIV
Sbjct: 55 AITLQNVVATVNLMNELDLRKINFCTRNTEYNPSRFKGLVMRIREPKTTALIFRSGKIVV 114
Query: 62 TGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFS 121
TGAKSE A LAARKYARI+QK+GF ++F FKIQNIVG+CDV FPIKLE LN H FS
Sbjct: 115 TGAKSEDAALLAARKYARIIQKLGFSIKFCSFKIQNIVGTCDVRFPIKLESLNQIHGQFS 174
Query: 122 TYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
+YEPELFP LIYR+ KP V +LIF++GK+V+TGA+ ++ I A + + P+L +
Sbjct: 175 SYEPELFPALIYRLVKPRVVLLIFVNGKIVLTGARTQQDIQEALDIMLPILKSF 228
>gi|307206120|gb|EFN84200.1| TATA-box-binding protein [Harpegnathos saltator]
Length = 241
Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 139/175 (79%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QN+V+TI+L+ +L L I + RN+EYNP+RF+ + MRI+ P+ TALIF SGK+V
Sbjct: 64 LEPCLQNVVSTIDLQTELKLMYINVRTRNSEYNPARFTGLVMRIQNPRATALIFRSGKLV 123
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGA+SE ++ LAA+K+ARI+QK+GFPV+F F +QNIV +CD++FPIKLE LN H F
Sbjct: 124 CTGARSEDESLLAAKKFARIIQKLGFPVRFTSFTVQNIVATCDLKFPIKLESLNQMHGQF 183
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPEL+PGL YRM KP V +LIF++GKVVITGAK RE ++ A +IYP+L +
Sbjct: 184 SSYEPELYPGLTYRMLKPRVVLLIFVNGKVVITGAKKREDLHEALYHIYPILKSF 238
>gi|331686252|gb|AED87006.1| tata box binding protein [Sterkiella histriomuscorum]
Length = 299
Score = 232 bits (592), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 112/171 (65%), Positives = 137/171 (80%), Gaps = 1/171 (0%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P++QNIV+T NL KLDL+KIAL+ RNAEYNP RF+AV MRI+EPKTTALIFSSGK+V T
Sbjct: 109 PILQNIVSTANLGMKLDLRKIALNCRNAEYNPRRFAAVIMRIREPKTTALIFSSGKMVRT 168
Query: 63 GAKSESQAKLAARKYARIVQKIGF-PVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFS 121
GAKSE ++ AA+KY++ ++K+GF V +DFKIQNIVGSCDV FPI LE L+ H FS
Sbjct: 169 GAKSEEFSRDAAKKYSKAIKKVGFEDVNMQDFKIQNIVGSCDVGFPISLESLSSAHDKFS 228
Query: 122 TYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPE+FPGLIYRM P + +LIF SGK+V+TGAK + I A+ NIYPVL
Sbjct: 229 QYEPEIFPGLIYRMATPKIVLLIFASGKIVLTGAKNKNDIKEAYENIYPVL 279
>gi|383860592|ref|XP_003705773.1| PREDICTED: TATA-box-binding protein-like [Megachile rotundata]
Length = 241
Score = 232 bits (592), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 137/175 (78%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QN+V+T+NL +L L +I RN+EYNP+RF+ + MRI+ P+ TALIF SGK+V
Sbjct: 64 LEPCLQNVVSTVNLGTELKLMQINTRTRNSEYNPARFTGLIMRIRNPRATALIFHSGKLV 123
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGA+ E + LA RK+ARI+QK+GFPV+F +FKIQNIV +CD++FPIKLE LN H F
Sbjct: 124 CTGARCEEDSYLATRKFARIIQKLGFPVKFYNFKIQNIVATCDLKFPIKLENLNHIHGQF 183
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPEL+PGLIYRM P V +LIF++GK+V+TGAK R ++ A NNIYP+L +
Sbjct: 184 SSYEPELYPGLIYRMVSPRVVLLIFVNGKIVLTGAKNRTELQDALNNIYPILKSF 238
>gi|449016069|dbj|BAM79471.1| TATA-box binding protein [Cyanidioschyzon merolae strain 10D]
Length = 260
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 104/169 (61%), Positives = 138/169 (81%), Gaps = 1/169 (0%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
+QN+VA++NL C LDL+ IA+ ARNAEYNP RF+AV MRI++P+TTALIFSSGK+V TGA
Sbjct: 45 LQNVVASVNLLCPLDLRHIAMRARNAEYNPQRFAAVIMRIRDPRTTALIFSSGKVVITGA 104
Query: 65 KSESQAKLAARKYARIVQKIGF-PVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
+SE A+LAARKYA+IV+K+G+ V+ DF++ N+V S DV FPI+LE L H+ ++ Y
Sbjct: 105 RSEEDARLAARKYAKIVRKLGYADVKLADFELHNLVASADVRFPIRLEALAHAHSNYAHY 164
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPELFPGL+YRM +P + +LIF+SGKVVITGAK+R+ + AF +YPVL
Sbjct: 165 EPELFPGLVYRMLEPRLALLIFVSGKVVITGAKSRDDLNEAFQRLYPVL 213
>gi|167518271|ref|XP_001743476.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778575|gb|EDQ92190.1| predicted protein [Monosiga brevicollis MX1]
Length = 181
Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 108/174 (62%), Positives = 138/174 (79%), Gaps = 1/174 (0%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +N+VAT+ CKLDLK IA +ARNAEY+P RFSAV MRI+EP TTALIFSSGK++CT
Sbjct: 5 PYCRNLVATVTFNCKLDLKHIANNARNAEYSPKRFSAVIMRIREPHTTALIFSSGKMICT 64
Query: 63 GAKSESQAKLAARKYARIVQKIGF-PVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFS 121
GAKSE A A RKYA+I++K+G+ ++ ++F+IQN+VGSCDV FPI+LE L H F
Sbjct: 65 GAKSEDDAWRATRKYAQIIKKLGYGELRHENFQIQNMVGSCDVRFPIRLEGLAANHQCFC 124
Query: 122 TYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
TYEPE+FPGL+YRM KP V +LIF+SGKVV+TGAK+R+ I+ A N IY +L +
Sbjct: 125 TYEPEIFPGLVYRMVKPKVVLLIFVSGKVVVTGAKSRQTIHDAINAIYSILQQF 178
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 5 IQNIVATINLECKLDLKKIAL-HARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
IQN+V + ++ + L+ +A H Y P F + R+ +PK LIF SGK+V TG
Sbjct: 98 IQNMVGSCDVRFPIRLEGLAANHQCFCTYEPEIFPGLVYRMVKPKVVLLIFVSGKVVVTG 157
Query: 64 AKSESQAKLAARKYARIVQKIGFP 87
AKS A I+Q+ P
Sbjct: 158 AKSRQTIHDAINAIYSILQQFRKP 181
>gi|313226921|emb|CBY22066.1| unnamed protein product [Oikopleura dioica]
Length = 155
Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 104/151 (68%), Positives = 132/151 (87%)
Query: 25 LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKI 84
+ ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCTGAKSE +++LAARKYAR++QK+
Sbjct: 1 MRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEKSRLAARKYARVIQKL 60
Query: 85 GFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLI 144
GFP +FKDFKIQN+VGS DV+F I+LE+L HA F+++EPELFPGL+YRM KP + +LI
Sbjct: 61 GFPAKFKDFKIQNMVGSVDVKFAIRLEQLVLNHAQFTSFEPELFPGLVYRMIKPKLVLLI 120
Query: 145 FLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
F+SGKVV+TGAK R++I AFNNIYP+L +
Sbjct: 121 FVSGKVVLTGAKQRKEIDDAFNNIYPILRKF 151
>gi|345492218|ref|XP_001603648.2| PREDICTED: TATA-box-binding protein-like [Nasonia vitripennis]
Length = 238
Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 101/173 (58%), Positives = 140/173 (80%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P++QN+V+T++L C+L+L I RN+EYNP+RF+ + MRI+ P+ TALIF SGK+VCT
Sbjct: 63 PMLQNVVSTVSLGCELNLTYINTRTRNSEYNPARFTGLIMRIRNPRVTALIFRSGKLVCT 122
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GA+ E + LAA+K+ARI+QKIGFPV+F+DFKIQNIV + D++FPIKLE L+ H FS+
Sbjct: 123 GARCEEDSFLAAKKFARIIQKIGFPVKFRDFKIQNIVATADLKFPIKLENLSHKHGQFSS 182
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPEL+PGLIYRM P V +LIF++GK+V+TGAK R+++ A +NIYP+L +
Sbjct: 183 YEPELYPGLIYRMVLPRVVLLIFVNGKIVLTGAKNRQELKDALHNIYPILKSF 235
>gi|63145982|gb|AAY33926.1| TATA box binding protein [Ovis aries]
Length = 141
Score = 229 bits (583), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 106/141 (75%), Positives = 124/141 (87%)
Query: 10 ATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQ 69
+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCTGAKSE Q
Sbjct: 1 STVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQ 60
Query: 70 AKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFP 129
++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H FS+YEPELFP
Sbjct: 61 SRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFP 120
Query: 130 GLIYRMKKPNVTMLIFLSGKV 150
GLIYRM KP + +LIF+SGKV
Sbjct: 121 GLIYRMIKPRIVLLIFVSGKV 141
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 115 GFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQ 160
A + Y P+ F +I R+++P T LIF SGK+V TGAK+ EQ
Sbjct: 15 ALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQ 60
>gi|331686254|gb|AED87007.1| tata box binding protein [Sterkiella nova]
Length = 301
Score = 228 bits (582), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 108/171 (63%), Positives = 135/171 (78%), Gaps = 1/171 (0%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T NL +L L++IA++ RNAEYNP RF+AV MRI+EPKTTALIF SGK+VCT
Sbjct: 111 PTLQNIVSTANLGVELKLREIAMNCRNAEYNPRRFAAVIMRIREPKTTALIFRSGKMVCT 170
Query: 63 GAKSESQAKLAARKYARIVQKIGF-PVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFS 121
GAKSE ++ AA+KY++ ++K+GF V +DFKIQNIVGSCDV FPI LE L+ H FS
Sbjct: 171 GAKSEELSRDAAKKYSKAIKKVGFEDVNMQDFKIQNIVGSCDVGFPISLESLSSAHDKFS 230
Query: 122 TYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPE+FPGLIYRM P + +LIF SGK+V+TGAK + I A+ NIYPVL
Sbjct: 231 QYEPEIFPGLIYRMATPKIVLLIFASGKIVLTGAKNKNDIKEAYENIYPVL 281
>gi|301112330|ref|XP_002905244.1| TATA-box-binding protein [Phytophthora infestans T30-4]
gi|262095574|gb|EEY53626.1| TATA-box-binding protein [Phytophthora infestans T30-4]
Length = 251
Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 100/171 (58%), Positives = 135/171 (78%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I N+V T++L+ LDLK IALHARNAEYNP RFSAV MR+++PKTTALIF SGKIV TG
Sbjct: 50 IMNVVGTVDLKTPLDLKTIALHARNAEYNPKRFSAVIMRLRDPKTTALIFGSGKIVITGG 109
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYE 124
SE +LAARK+ R++QK+ FP +F +FK++N++G+CD+ FPI+LE L HA FS+YE
Sbjct: 110 TSEDSCRLAARKFTRVIQKLNFPAKFTEFKVRNVMGTCDIRFPIRLEGLLNDHARFSSYE 169
Query: 125 PELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
PELFPGLIY++ +P +T+LIF+SGK+V+ GA+ ++ A + +YPVL Y
Sbjct: 170 PELFPGLIYKLVEPKLTLLIFVSGKIVLCGARDSNHLHQAIDKMYPVLLQY 220
>gi|348686379|gb|EGZ26194.1| hypothetical protein PHYSODRAFT_345098 [Phytophthora sojae]
Length = 255
Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 100/171 (58%), Positives = 135/171 (78%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I N+V T++L+ LDLK IALHARNAEYNP RFSAV MR+++PKTTALIF SGKIV TG
Sbjct: 54 IMNVVGTVDLKTPLDLKTIALHARNAEYNPKRFSAVIMRLRDPKTTALIFGSGKIVITGG 113
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYE 124
SE +LAARK+ R++QK+ FP +F +FK++N++G+CD+ FPI+LE L HA FS+YE
Sbjct: 114 TSEESCRLAARKFTRVIQKLNFPAKFTEFKVRNVMGTCDIRFPIRLEGLLNDHARFSSYE 173
Query: 125 PELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
PELFPGLIY++ +P +T+LIF+SGK+V+ GA+ ++ A + +YPVL Y
Sbjct: 174 PELFPGLIYKLVEPKLTLLIFVSGKIVLCGARDSNHLHQAIDKMYPVLLQY 224
>gi|380013265|ref|XP_003690685.1| PREDICTED: TATA-box-binding protein-like [Apis florea]
Length = 241
Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 134/175 (76%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QN+V+T+NL +L L I RN+EYNP+RF + MRI+ P+ TALIF SGKIV
Sbjct: 64 IEPCLQNVVSTVNLGIELPLMYINTRTRNSEYNPARFMGLIMRIRNPRATALIFHSGKIV 123
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGA+SE + LA RK+ARI+QK+GF +F +FKIQNIV +CD++FPIKLE LN H F
Sbjct: 124 CTGARSEEDSYLATRKFARIIQKLGFAAKFYNFKIQNIVATCDLKFPIKLENLNHIHGQF 183
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPEL+PGLIYRM P V +LIF++GKVV+TGAK R ++ A NNIYP+L +
Sbjct: 184 SSYEPELYPGLIYRMVSPRVVLLIFVNGKVVLTGAKNRTELQDALNNIYPILKSF 238
>gi|66498987|ref|XP_394229.2| PREDICTED: TATA-box-binding protein-like [Apis mellifera]
Length = 241
Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 134/175 (76%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QN+V+T+NL +L L I RN+EYNP+RF + MRI+ P+ TALIF SGKIV
Sbjct: 64 IEPCLQNVVSTVNLGIELPLMYINTRTRNSEYNPARFMGLIMRIRNPRATALIFHSGKIV 123
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGA+SE + LA RK+ARI+QK+GF +F +FKIQNIV +CD++FPIKLE LN H F
Sbjct: 124 CTGARSEEDSYLATRKFARIIQKLGFAAKFYNFKIQNIVATCDLKFPIKLENLNHIHGQF 183
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPEL+PGLIYRM P V +LIF++GKVV+TGAK R ++ A NNIYP+L +
Sbjct: 184 SSYEPELYPGLIYRMVSPRVVLLIFVNGKVVLTGAKNRTELQDALNNIYPILKSF 238
>gi|340728982|ref|XP_003402790.1| PREDICTED: TATA-box-binding protein-like [Bombus terrestris]
Length = 241
Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 101/175 (57%), Positives = 135/175 (77%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QN+V+T+NL +L L I RN+EYNP+RF+ + MRI+ P+ TALIF SGK+V
Sbjct: 64 IEPCLQNVVSTVNLGIQLPLMYINTRTRNSEYNPARFTGLVMRIRNPRATALIFHSGKLV 123
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGA+ E + LA RK+ARI+QK+GF V+F +FKIQNIV +CD++FPIKLE LN H F
Sbjct: 124 CTGARCEEDSFLATRKFARIIQKLGFTVKFYNFKIQNIVATCDLKFPIKLENLNHIHGQF 183
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPEL+PGLIYRM P V +LIF++GK+V+TGAK R ++ A NNIYP+L +
Sbjct: 184 SSYEPELYPGLIYRMVSPRVVLLIFVNGKIVLTGAKNRAELQDALNNIYPILKSF 238
>gi|170031575|ref|XP_001843660.1| TATA-box-binding protein [Culex quinquefasciatus]
gi|167870488|gb|EDS33871.1| TATA-box-binding protein [Culex quinquefasciatus]
Length = 236
Score = 225 bits (574), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 99/172 (57%), Positives = 135/172 (78%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+++N VAT++L C+L+L+ I RN+EYNPSRF V MRI++P+ TAL+F SGKIVCTG
Sbjct: 62 LVRNCVATVSLGCELNLQSINFRTRNSEYNPSRFHGVVMRIRDPRCTALVFRSGKIVCTG 121
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
AK+E A LAARK+ARI+QK+G+ V+F +FK+QN+V + D+ FP++LE LN H FS+Y
Sbjct: 122 AKNEHDANLAARKFARIIQKVGYNVKFLEFKVQNLVATVDLRFPVRLENLNQVHGQFSSY 181
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
EPELFPGLIYRM KP V +LIF++GK+V TGAK+ +I + NIYP+L +
Sbjct: 182 EPELFPGLIYRMVKPRVVLLIFVNGKIVFTGAKSEWEIRESLENIYPILQSF 233
>gi|350425498|ref|XP_003494140.1| PREDICTED: TATA-box-binding protein-like [Bombus impatiens]
Length = 241
Score = 225 bits (574), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 101/175 (57%), Positives = 135/175 (77%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QN+V+T+NL +L L I RN+EYNP+RF+ + MRI+ P+ TALIF SGK+V
Sbjct: 64 IEPCLQNVVSTVNLGIELPLMYINTRTRNSEYNPARFTGLVMRIRNPRATALIFHSGKLV 123
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGA+ E + LA RK+ARI+QK+GF V+F +FKIQNIV +CD++FPIKLE LN H F
Sbjct: 124 CTGARCEEDSFLATRKFARIIQKLGFTVKFYNFKIQNIVATCDLKFPIKLENLNHIHGQF 183
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
S+YEPEL+PGLIYRM P V +LIF++GK+V+TGAK R ++ A NNIYP+L +
Sbjct: 184 SSYEPELYPGLIYRMVSPRVVLLIFVNGKIVLTGAKNRVELQDALNNIYPILKSF 238
>gi|332018160|gb|EGI58766.1| TATA-box-binding protein [Acromyrmex echinatior]
Length = 240
Score = 225 bits (573), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 102/173 (58%), Positives = 135/173 (78%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QN+V+T+NL+ +L L I + RN+EYNP+RF+ + MRI+ P+ TALIF SGK+VCT
Sbjct: 65 PCLQNVVSTVNLQTELKLMYINVRTRNSEYNPARFTGLIMRIQNPRATALIFRSGKLVCT 124
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GA+SE + LAA+K+ARI+QK+GFPV+F FKIQNIV +CD++FPIKLE L H FS+
Sbjct: 125 GARSEQDSFLAAKKFARIIQKLGFPVKFSSFKIQNIVATCDLKFPIKLEILYQCHGQFSS 184
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPEL+PGL YRM P V +LIF++GKVV+TGAK R ++ A N IYP L +Y
Sbjct: 185 YEPELYPGLTYRMYSPRVVLLIFVNGKVVLTGAKNRTELQDALNIIYPTLKMY 237
>gi|189236649|ref|XP_969256.2| PREDICTED: similar to TATA-box-binding protein [Tribolium
castaneum]
Length = 236
Score = 224 bits (572), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 99/172 (57%), Positives = 135/172 (78%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
IQN V T++L KLDL I RN+EYNP+RF + MR+++P+TTALIF +GKIVCTG
Sbjct: 62 TIQNCVTTVDLNTKLDLALINARTRNSEYNPARFHGLIMRLRDPRTTALIFQTGKIVCTG 121
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
AKSE A LA++K+ARI+QK+GF ++F +FKIQN+V +CD+ FPIKLE L+ H F +Y
Sbjct: 122 AKSEQDALLASKKFARIIQKLGFDIKFDNFKIQNLVATCDLRFPIKLESLSLLHGQFCSY 181
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
EPELFPG+IYRM KP++ +LIF++GK+V TG+K+RE I + +NIYP+L +
Sbjct: 182 EPELFPGIIYRMIKPHLCLLIFVNGKIVFTGSKSREGIKESLDNIYPILRSF 233
>gi|270005208|gb|EFA01656.1| hypothetical protein TcasGA2_TC007228 [Tribolium castaneum]
Length = 238
Score = 224 bits (572), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 99/172 (57%), Positives = 135/172 (78%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
IQN V T++L KLDL I RN+EYNP+RF + MR+++P+TTALIF +GKIVCTG
Sbjct: 64 TIQNCVTTVDLNTKLDLALINARTRNSEYNPARFHGLIMRLRDPRTTALIFQTGKIVCTG 123
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
AKSE A LA++K+ARI+QK+GF ++F +FKIQN+V +CD+ FPIKLE L+ H F +Y
Sbjct: 124 AKSEQDALLASKKFARIIQKLGFDIKFDNFKIQNLVATCDLRFPIKLESLSLLHGQFCSY 183
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
EPELFPG+IYRM KP++ +LIF++GK+V TG+K+RE I + +NIYP+L +
Sbjct: 184 EPELFPGIIYRMIKPHLCLLIFVNGKIVFTGSKSREGIKESLDNIYPILRSF 235
>gi|258563652|ref|XP_002582571.1| TATA-box binding protein [Uncinocarpus reesii 1704]
gi|237908078|gb|EEP82479.1| TATA-box binding protein [Uncinocarpus reesii 1704]
Length = 251
Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/167 (64%), Positives = 128/167 (76%), Gaps = 17/167 (10%)
Query: 6 QNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAK 65
+NIVAT+NL+C+LDLK IALHARNAEYNP RF+AV MRI+EPKTTALIF+SGK+V TGAK
Sbjct: 90 RNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVTGAK 149
Query: 66 SESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEP 125
+ GF +F DFKIQNIVGSCD++F I+LE L H FS+YEP
Sbjct: 150 NS-----------------GFNAKFTDFKIQNIVGSCDIKFSIRLEGLASRHHNFSSYEP 192
Query: 126 ELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
ELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+IY AF IYPVL
Sbjct: 193 ELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVL 239
>gi|157126257|ref|XP_001654561.1| TATA binding protein, putative [Aedes aegypti]
gi|108882533|gb|EAT46758.1| AAEL002079-PA [Aedes aegypti]
Length = 234
Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 98/172 (56%), Positives = 136/172 (79%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+++N VAT++L C+L+L+ I RN+EYNP+RF V MRI+EP+ TAL+F SGKIVCTG
Sbjct: 60 LVRNCVATVSLGCELNLQAINFRLRNSEYNPARFHGVVMRIREPRCTALVFRSGKIVCTG 119
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A++E+ A LAARK+ARI+QK+G+ V+F +FK+QN+V + D+ FPI+LE LN H FS+Y
Sbjct: 120 ARNEADAYLAARKFARIIQKLGYSVRFIEFKVQNLVATVDLRFPIRLENLNQVHGQFSSY 179
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
EPELFPGLIYRM KP V +LIF++GK+V TGAK+ ++ + NIYP+L +
Sbjct: 180 EPELFPGLIYRMVKPRVVLLIFVNGKIVFTGAKSEREVTDSLENIYPILQSF 231
>gi|332374320|gb|AEE62301.1| unknown [Dendroctonus ponderosae]
Length = 243
Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 96/171 (56%), Positives = 133/171 (77%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
+QN VAT+++ L+L+ I RN E+NP RF + MRI+EPKTTALIF SGKIVCTGA
Sbjct: 70 LQNCVATVDMHTTLNLQLINAKTRNTEFNPQRFHGLIMRIREPKTTALIFRSGKIVCTGA 129
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYE 124
++E A +A++K+AR++QK+GF ++F +FK+QN+V +CD++FPIKLE LN H FS+YE
Sbjct: 130 RNEFDALIASKKFARVIQKLGFHIKFANFKVQNLVATCDLKFPIKLENLNHMHGQFSSYE 189
Query: 125 PELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
PELFPGL+YRM KP + +LIF++GK+V TG K+RE I A NI+P+L +
Sbjct: 190 PELFPGLVYRMIKPKIVLLIFVNGKIVFTGGKSREDIKEALENIHPILRSF 240
>gi|325182645|emb|CCA17100.1| TATAboxbinding protein putative [Albugo laibachii Nc14]
Length = 270
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 132/171 (77%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
+ N+V TI+L+ +L+LK IALHARNAEYNP RF AV MR+++PKTTALIFSSGKIV TGA
Sbjct: 76 VMNVVGTIDLKTRLELKTIALHARNAEYNPKRFCAVVMRLRDPKTTALIFSSGKIVITGA 135
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYE 124
+SE +LA RK+ R++QK+ FP +F++F+IQNI+G+ DV F I+LE + HA F +YE
Sbjct: 136 RSEEFCRLAGRKFTRVIQKLHFPARFENFRIQNIMGTSDVHFSIRLEGILNDHARFCSYE 195
Query: 125 PELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
PELFPGLIYR+ +P +TMLIF+SGK+V GAK + A +YPVL Y
Sbjct: 196 PELFPGLIYRLTEPKLTMLIFVSGKIVFCGAKDSSHLDQAIEKMYPVLLEY 246
>gi|413933536|gb|AFW68087.1| TATA-binding protein2 [Zea mays]
Length = 139
Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 101/139 (72%), Positives = 120/139 (86%)
Query: 42 MRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGS 101
MRI+EPKTTALIF+SGK+VCTGAKSE Q+KLAARKYARI+QK+GFP +FKDFKIQNIVGS
Sbjct: 1 MRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGS 60
Query: 102 CDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQI 161
CDV+FPI+LE L H FS+YEPELFPGLIYRMK+P + +LIF+SGK+V+TGAK RE+
Sbjct: 61 CDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREET 120
Query: 162 YAAFNNIYPVLNVYVTYDQ 180
Y AF NIYPVL+ + Q
Sbjct: 121 YTAFENIYPVLSEFRKIQQ 139
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 5 IQNIVATINLECKLDLKKIAL-HARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
IQNIV + +++ + L+ +A H + Y P F + R+K+PK LIF SGKIV TG
Sbjct: 54 IQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTG 113
Query: 64 AK 65
AK
Sbjct: 114 AK 115
>gi|47217167|emb|CAG11003.1| unnamed protein product [Tetraodon nigroviridis]
Length = 283
Score = 218 bits (556), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 101/140 (72%), Positives = 120/140 (85%)
Query: 36 RFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKI 95
RF+AV MRI+EP+TTALIFSSGK+VCTGAKSE Q++LAARKYAR+VQK+GFP +F DFKI
Sbjct: 140 RFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKI 199
Query: 96 QNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGA 155
QN+VGSCDV FPI+LE L H FS+YEPELFPGLIYRM KP + +LIF+SGKVV+TGA
Sbjct: 200 QNMVGSCDVRFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGA 259
Query: 156 KAREQIYAAFNNIYPVLNVY 175
K R +IY AF NIYP+L +
Sbjct: 260 KVRAEIYEAFENIYPILKGF 279
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 5 IQNIVATINLECKLDLKKIAL-HARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
IQN+V + ++ + L+ + L H + + Y P F + R+ +P+ LIF SGK+V TG
Sbjct: 199 IQNMVGSCDVRFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTG 258
Query: 64 AKSESQ 69
AK ++
Sbjct: 259 AKVRAE 264
Score = 39.7 bits (91), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 116 FHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQ 160
F +++ F +I R+++P T LIF SGK+V TGAK+ EQ
Sbjct: 129 FRELWNRATAPRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQ 173
>gi|256084656|ref|XP_002578543.1| TATA-box binding protein [Schistosoma mansoni]
gi|353228683|emb|CCD74854.1| putative tata-box binding protein [Schistosoma mansoni]
Length = 211
Score = 218 bits (556), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 94/173 (54%), Positives = 135/173 (78%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
PVI N+V+T++L C ++L+K+ LH R+AEYNP RF V MR++EP+ T L+F +G++VCT
Sbjct: 35 PVIHNMVSTVDLGCPIELRKLVLHVRSAEYNPRRFPGVVMRLREPRVTCLVFGTGRMVCT 94
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GA+SES A L +RK ARI+Q++GF V+F +F IQN+VG D++FPI+LE + + +
Sbjct: 95 GARSESDANLGSRKCARILQRLGFDVKFMNFTIQNMVGLADLKFPIRLEGVQLANEQMTQ 154
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPE+FP LIYR+ KP + MLIF++GK+V+TGAK+RE +Y A NN+YP+L Y
Sbjct: 155 YEPEIFPALIYRIIKPRLVMLIFVNGKIVMTGAKSREHLYEALNNVYPILYNY 207
>gi|195117828|ref|XP_002003449.1| GI17918 [Drosophila mojavensis]
gi|193914024|gb|EDW12891.1| GI17918 [Drosophila mojavensis]
Length = 220
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 130/168 (77%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
+QNIVAT +++C+LDLK I RN+EY P RF V MR+ P+ TALIF +GK++CTGA
Sbjct: 47 LQNIVATFSVDCELDLKTINSRTRNSEYTPKRFRGVIMRMHSPRCTALIFRTGKVICTGA 106
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYE 124
++E++A + +RK+ARI+QK+GFPV+F D+K+QNIV + D+ FPI+LE LN H FS+YE
Sbjct: 107 RNETEANIGSRKFARILQKLGFPVKFVDYKLQNIVATVDLRFPIRLENLNQVHGQFSSYE 166
Query: 125 PELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
PE+FPGLIYRM KP + +LIF++GK+V TGAK+R+ I I P+L
Sbjct: 167 PEMFPGLIYRMVKPRIVLLIFVNGKIVFTGAKSRKDIMDCLEAISPIL 214
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 92 DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVV 151
+ K+QNIV + V+ + L+ +N S Y P+ F G+I RM P T LIF +GKV+
Sbjct: 44 EIKLQNIVATFSVDCELDLKTINS-RTRNSEYTPKRFRGVIMRMHSPRCTALIFRTGKVI 102
Query: 152 ITGAK 156
TGA+
Sbjct: 103 CTGAR 107
>gi|195434401|ref|XP_002065191.1| GK15318 [Drosophila willistoni]
gi|194161276|gb|EDW76177.1| GK15318 [Drosophila willistoni]
Length = 226
Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 96/168 (57%), Positives = 129/168 (76%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
+QNIVAT ++ C+LDLK I RN+EY+P RF V MR+ P+ TALIF +GKI+CTGA
Sbjct: 53 LQNIVATFSVACELDLKSINSRTRNSEYSPKRFRGVIMRMHSPRCTALIFRTGKIICTGA 112
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYE 124
++E +A + +RK+ARI+QK+GFPV+F D+K+QNIV + D+ FPI+LE LN H FS+YE
Sbjct: 113 RNEIEADIGSRKFARILQKLGFPVKFTDYKLQNIVATVDLRFPIRLENLNQVHGQFSSYE 172
Query: 125 PELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
PE+FPGLIYRM KP + +LIF++GKVV TGAK+R+ I I P+L
Sbjct: 173 PEMFPGLIYRMVKPRIVLLIFVNGKVVFTGAKSRKDIMDCLEAISPIL 220
>gi|226466670|emb|CAX69470.1| TATA box binding protein like 2 [Schistosoma japonicum]
Length = 212
Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 93/173 (53%), Positives = 134/173 (77%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
PVI N+V+T++L C ++L+K+ LH R+AEYNP RF V +R++EP+ T L+F +G++VCT
Sbjct: 36 PVIHNMVSTVDLGCPIELRKLVLHVRSAEYNPRRFPGVVIRLREPRVTCLVFGTGRMVCT 95
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GA+SE+ A L +RK ARI+QK+GF V+F +F IQN+VG D+ FP++LE + + +
Sbjct: 96 GARSEADANLGSRKCARIIQKLGFDVKFMNFTIQNMVGLADLRFPVRLEGVQLANEQMTQ 155
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPE+FP LIYR+ KP + MLIF++GKVV+TGAK+RE +Y A NN+YP+L Y
Sbjct: 156 YEPEIFPALIYRIIKPRLVMLIFVNGKVVMTGAKSREHLYEALNNVYPILYNY 208
>gi|76155499|gb|AAX26791.2| SJCHGC06425 protein [Schistosoma japonicum]
Length = 227
Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 93/173 (53%), Positives = 134/173 (77%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
PVI N+V+T++L C ++L+K+ LH R+AEYNP RF V +R++EP+ T L+F +G++VCT
Sbjct: 51 PVIHNMVSTVDLGCPIELRKLVLHVRSAEYNPRRFPGVVIRLREPRVTCLVFGTGRMVCT 110
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GA+SE+ A L +RK ARI+QK+GF V+F +F IQN+VG D+ FP++LE + + +
Sbjct: 111 GARSEADANLGSRKCARIIQKLGFDVKFMNFTIQNMVGLADLRFPVRLEGVQLANEQMTQ 170
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPE+FP LIYR+ KP + MLIF++GKVV+TGAK+RE +Y A NN+YP+L Y
Sbjct: 171 YEPEIFPALIYRIIKPRLVMLIFVNGKVVMTGAKSREHLYEALNNVYPILYNY 223
>gi|195388008|ref|XP_002052684.1| GJ17690 [Drosophila virilis]
gi|194149141|gb|EDW64839.1| GJ17690 [Drosophila virilis]
Length = 220
Score = 216 bits (549), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 129/168 (76%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
+QNIVAT +++C+LDLK I RN+EY P RF V MR+ P+ TALIF +GK++CTGA
Sbjct: 47 LQNIVATFSVDCELDLKTINSRTRNSEYTPKRFRGVIMRMHSPRCTALIFRTGKVICTGA 106
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYE 124
++E +A + +RK+ARI+QK+GFPV+F D+K+QNIV + D+ FPI+LE LN H FS+YE
Sbjct: 107 RNEMEANIGSRKFARILQKLGFPVKFVDYKLQNIVATVDLRFPIRLENLNQVHGQFSSYE 166
Query: 125 PELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
PE+FPGLIYRM KP + +LIF++GK+V TGAK+R+ I I P+L
Sbjct: 167 PEMFPGLIYRMVKPRIVLLIFVNGKIVFTGAKSRKDIMDCLEAISPIL 214
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 92 DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVV 151
+ K+QNIV + V+ + L+ +N S Y P+ F G+I RM P T LIF +GKV+
Sbjct: 44 EIKLQNIVATFSVDCELDLKTINS-RTRNSEYTPKRFRGVIMRMHSPRCTALIFRTGKVI 102
Query: 152 ITGAK 156
TGA+
Sbjct: 103 CTGAR 107
>gi|195035545|ref|XP_001989238.1| GH11614 [Drosophila grimshawi]
gi|193905238|gb|EDW04105.1| GH11614 [Drosophila grimshawi]
Length = 220
Score = 216 bits (549), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 129/168 (76%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
+QNIVAT +++C+LDLK I RN+EY P RF V MR+ P+ TALIF +GK++CTGA
Sbjct: 47 LQNIVATFSVDCELDLKTINSRTRNSEYTPKRFRGVIMRMHSPRCTALIFRTGKVICTGA 106
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYE 124
++E +A + +RK+ARI+QK+GFPV+F D+K+QNIV + D+ FPI+LE LN H FS+YE
Sbjct: 107 RNEIEANMGSRKFARILQKLGFPVKFVDYKLQNIVATVDLRFPIRLENLNQVHGQFSSYE 166
Query: 125 PELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
PE+FPGLIYRM KP + +LIF++GKVV TGAK+R+ I I P+L
Sbjct: 167 PEMFPGLIYRMVKPRLVLLIFVNGKVVFTGAKSRKDIMDCLEAISPIL 214
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 92 DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVV 151
+ K+QNIV + V+ + L+ +N S Y P+ F G+I RM P T LIF +GKV+
Sbjct: 44 EIKLQNIVATFSVDCELDLKTINS-RTRNSEYTPKRFRGVIMRMHSPRCTALIFRTGKVI 102
Query: 152 ITGAK 156
TGA+
Sbjct: 103 CTGAR 107
>gi|125984322|ref|XP_001355925.1| GA20441 [Drosophila pseudoobscura pseudoobscura]
gi|195172938|ref|XP_002027252.1| GL24756 [Drosophila persimilis]
gi|54644243|gb|EAL32984.1| GA20441 [Drosophila pseudoobscura pseudoobscura]
gi|194113089|gb|EDW35132.1| GL24756 [Drosophila persimilis]
Length = 220
Score = 215 bits (548), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 129/168 (76%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
+QNIVAT ++ C+LDLK I RN+EY+P RF V MR+ P+ TALIF +GKI+CTGA
Sbjct: 47 LQNIVATFSVNCELDLKTINSRTRNSEYSPKRFRGVIMRMHSPRCTALIFRTGKIICTGA 106
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYE 124
++E A + +RK+ARI+QK+GFPV+F ++K+QNIV + D+ FPI+LE LN H FS+YE
Sbjct: 107 RNERDADIGSRKFARILQKLGFPVKFMEYKLQNIVATVDLRFPIRLENLNQVHGQFSSYE 166
Query: 125 PELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
PE+FPGLIYRM KP + +LIF++GKVV TGAK+R+ I + I P+L
Sbjct: 167 PEMFPGLIYRMVKPRIVLLIFVNGKVVFTGAKSRKDIMDCLDAISPIL 214
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 92 DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVV 151
+ K+QNIV + V + L+ +N S Y P+ F G+I RM P T LIF +GK++
Sbjct: 44 EIKLQNIVATFSVNCELDLKTINS-RTRNSEYSPKRFRGVIMRMHSPRCTALIFRTGKII 102
Query: 152 ITGAK 156
TGA+
Sbjct: 103 CTGAR 107
>gi|194863019|ref|XP_001970236.1| GG10512 [Drosophila erecta]
gi|190662103|gb|EDV59295.1| GG10512 [Drosophila erecta]
Length = 224
Score = 214 bits (546), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 129/168 (76%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
+QNIVAT ++ C+LDLK I RN+EY+P RF V MR+ P+ TALIF +GKI+CTGA
Sbjct: 51 LQNIVATFSVNCELDLKAINSRTRNSEYSPKRFRGVIMRMHSPRCTALIFRTGKIICTGA 110
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYE 124
++E +A + +RK+ARI+QK+GFPV+F ++K+QNIV + D+ FPI+LE LN H FS+YE
Sbjct: 111 RNEIEADIGSRKFARILQKLGFPVKFMEYKLQNIVATVDLRFPIRLENLNHVHGQFSSYE 170
Query: 125 PELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
PE+FPGLIYRM KP + +LIF++GKVV TGAK+R+ I I P+L
Sbjct: 171 PEMFPGLIYRMVKPRIVLLIFVNGKVVFTGAKSRKDIMDCLEAISPIL 218
>gi|195472903|ref|XP_002088737.1| GE18732 [Drosophila yakuba]
gi|194174838|gb|EDW88449.1| GE18732 [Drosophila yakuba]
Length = 224
Score = 214 bits (546), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 129/168 (76%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
+QNIVAT ++ C+LDLK I RN+EY+P RF V MR+ P+ TALIF +GKI+CTGA
Sbjct: 51 LQNIVATFSVNCELDLKAINSRTRNSEYSPKRFRGVIMRMHSPRCTALIFRTGKIICTGA 110
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYE 124
++E +A + +RK+ARI+QK+GFPV+F ++K+QNIV + D+ FPI+LE LN H FS+YE
Sbjct: 111 RNEIEADIGSRKFARILQKLGFPVKFMEYKLQNIVATVDLRFPIRLENLNQVHGQFSSYE 170
Query: 125 PELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
PE+FPGLIYRM KP + +LIF++GKVV TGAK+R+ I I P+L
Sbjct: 171 PEMFPGLIYRMVKPRIVLLIFVNGKVVFTGAKSRKDIMDCLEAISPIL 218
>gi|195339082|ref|XP_002036150.1| GM16720 [Drosophila sechellia]
gi|194130030|gb|EDW52073.1| GM16720 [Drosophila sechellia]
Length = 224
Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 129/168 (76%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
+QNIVAT ++ C+LDLK I RN+EY+P RF V MR+ P+ TALIF +GK++CTGA
Sbjct: 51 LQNIVATFSVNCELDLKAINSRTRNSEYSPKRFRGVIMRMHSPRCTALIFRTGKVICTGA 110
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYE 124
++E +A + +RK+ARI+QK+GFPV+F ++K+QNIV + D+ FPI+LE LN H FS+YE
Sbjct: 111 RNEIEADIGSRKFARILQKLGFPVKFMEYKLQNIVATVDLRFPIRLENLNQVHGQFSSYE 170
Query: 125 PELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
PE+FPGLIYRM KP + +LIF++GKVV TGAK+R+ I I P+L
Sbjct: 171 PEMFPGLIYRMVKPRIVLLIFVNGKVVFTGAKSRKDIMDCLEAISPIL 218
>gi|17136834|ref|NP_476939.1| TBP-related factor [Drosophila melanogaster]
gi|25091428|sp|Q27896.1|TRF_DROME RecName: Full=TBP-related factor
gi|11136|emb|CAA50185.1| TBP-related factor [Drosophila melanogaster]
gi|11138|emb|CAA50186.1| TBP-related factor [Drosophila melanogaster]
gi|7297339|gb|AAF52600.1| TBP-related factor [Drosophila melanogaster]
gi|21711771|gb|AAM75076.1| RE61442p [Drosophila melanogaster]
gi|220942420|gb|ACL83753.1| Trf-PA [synthetic construct]
gi|220955718|gb|ACL90402.1| Trf-PA [synthetic construct]
gi|445085|prf||1908393A TATA-binding protein-related factor
Length = 224
Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 129/168 (76%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
+QNIVAT ++ C+LDLK I RN+EY+P RF V MR+ P+ TALIF +GK++CTGA
Sbjct: 51 LQNIVATFSVNCELDLKAINSRTRNSEYSPKRFRGVIMRMHSPRCTALIFRTGKVICTGA 110
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYE 124
++E +A + +RK+ARI+QK+GFPV+F ++K+QNIV + D+ FPI+LE LN H FS+YE
Sbjct: 111 RNEIEADIGSRKFARILQKLGFPVKFMEYKLQNIVATVDLRFPIRLENLNHVHGQFSSYE 170
Query: 125 PELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
PE+FPGLIYRM KP + +LIF++GKVV TGAK+R+ I I P+L
Sbjct: 171 PEMFPGLIYRMVKPRIVLLIFVNGKVVFTGAKSRKDIMDCLEAISPIL 218
>gi|195577454|ref|XP_002078585.1| GD23502 [Drosophila simulans]
gi|194190594|gb|EDX04170.1| GD23502 [Drosophila simulans]
Length = 224
Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 129/168 (76%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
+QNIVAT ++ C+LDLK I RN+EY+P RF V MR+ P+ TALIF +GK++CTGA
Sbjct: 51 LQNIVATFSVNCELDLKAINSRTRNSEYSPKRFRGVIMRMHSPRCTALIFRTGKVICTGA 110
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYE 124
++E +A + +RK+ARI+QK+GFPV+F ++K+QNIV + D+ FPI+LE LN H FS+YE
Sbjct: 111 RNEIEADIGSRKFARILQKLGFPVKFMEYKLQNIVATVDLRFPIRLENLNQVHGQFSSYE 170
Query: 125 PELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
PE+FPGLIYRM KP + +LIF++GKVV TGAK+R+ I I P+L
Sbjct: 171 PEMFPGLIYRMVKPRIVLLIFVNGKVVFTGAKSRKDIMDCLEAISPIL 218
>gi|194759081|ref|XP_001961778.1| GF14757 [Drosophila ananassae]
gi|190615475|gb|EDV30999.1| GF14757 [Drosophila ananassae]
Length = 224
Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 128/168 (76%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
+QNIVAT ++ C+LDLK I RN+EY+P RF V MR+ P+ TALIF +GKI+CTGA
Sbjct: 51 LQNIVATFSVNCELDLKAINSRTRNSEYSPKRFRGVIMRMHSPRCTALIFRTGKIICTGA 110
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYE 124
++E A + +RK+ARI+QK+GFPV+F ++K+QNIV + D+ FPI+LE LN H FS+YE
Sbjct: 111 RNEIDADIGSRKFARILQKLGFPVKFMEYKLQNIVATVDLRFPIRLENLNQVHGQFSSYE 170
Query: 125 PELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
PE+FPGLIYRM KP + +LIF++GKVV TGAK+R+ I I P+L
Sbjct: 171 PEMFPGLIYRMVKPRIVLLIFVNGKVVFTGAKSRKDIMDCLEAISPIL 218
>gi|18483230|gb|AAL73974.1|AF466201_3 TATA-binding protein [Sorghum bicolor]
Length = 203
Score = 212 bits (539), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 101/151 (66%), Positives = 121/151 (80%), Gaps = 17/151 (11%)
Query: 6 QNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAK 65
+NIV+T+NL+CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+
Sbjct: 61 RNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKM------ 114
Query: 66 SESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEP 125
YARI+QK+GFP +FKDFKIQNIVGSCDV+FPI+LE L H FS+YEP
Sbjct: 115 -----------YARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEP 163
Query: 126 ELFPGLIYRMKKPNVTMLIFLSGKVVITGAK 156
ELFPGLIYRMK+P + +LIF+SGK+V+TGAK
Sbjct: 164 ELFPGLIYRMKQPKIVLLIFVSGKIVLTGAK 194
>gi|116195450|ref|XP_001223537.1| hypothetical protein CHGG_04323 [Chaetomium globosum CBS 148.51]
gi|88180236|gb|EAQ87704.1| hypothetical protein CHGG_04323 [Chaetomium globosum CBS 148.51]
Length = 242
Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 99/171 (57%), Positives = 130/171 (76%)
Query: 2 APVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVC 61
AP+IQN+VAT++L C+LDL+ I+ ARN EYN +F A+ MRI+EP+TT L+FSSGK+V
Sbjct: 34 APIIQNVVATVDLGCRLDLRLISEQARNVEYNRRKFHALIMRIREPRTTTLVFSSGKMVI 93
Query: 62 TGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFS 121
TGAKSE+ AKLAARK+AR +QK GF F DFK+QN VGS +F I+LER+ + +
Sbjct: 94 TGAKSEALAKLAARKHARALQKCGFGTGFSDFKVQNYVGSATCDFLIRLERIAHMYRESA 153
Query: 122 TYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPELFPGL+Y M +P + L+F +GK+V+TGAKA E I AF N+YP+L
Sbjct: 154 MYEPELFPGLVYTMLRPKLKCLVFSTGKIVLTGAKAVEDIQEAFANLYPLL 204
>gi|323447675|gb|EGB03588.1| hypothetical protein AURANDRAFT_33824 [Aureococcus anophagefferens]
Length = 274
Score = 209 bits (533), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 94/171 (54%), Positives = 131/171 (76%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
+QN+VAT+NL +DL+ +AL+ARNAEYNP +F+AV MR++EP+ TAL+FS+GK+V TGA
Sbjct: 50 VQNVVATVNLRISIDLRTLALNARNAEYNPKKFAAVIMRVREPRCTALVFSTGKMVITGA 109
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYE 124
KSE A+ ARK+A I++KIGF +F +FK+QN+V + D FPI+LE L HA FS+YE
Sbjct: 110 KSEDAARRGARKFAAIIRKIGFQPKFGEFKVQNMVATSDAGFPIRLEALVYAHAKFSSYE 169
Query: 125 PELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
PELFPGLIYR+ P +L+F+SG++V+TG K+ + AF +YPVL +
Sbjct: 170 PELFPGLIYRLVIPKTVLLLFVSGRMVLTGGKSLGHLRTAFEKMYPVLTEF 220
>gi|322802013|gb|EFZ22550.1| hypothetical protein SINV_10179 [Solenopsis invicta]
Length = 158
Score = 209 bits (532), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 93/153 (60%), Positives = 122/153 (79%)
Query: 23 IALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQ 82
I + RN+EYNP+RF+ + MRI+ P+ TALIF SGK+VCTGA+SE + LAA+K+ARI+Q
Sbjct: 3 INVRTRNSEYNPARFTGLIMRIQNPRATALIFRSGKLVCTGARSEEDSLLAAKKFARIIQ 62
Query: 83 KIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTM 142
K+GFPV+F FKIQNIV +CD++FPIKL+ LN H FS+YEPEL+PGL YRM P V +
Sbjct: 63 KLGFPVKFTCFKIQNIVATCDLKFPIKLDNLNQMHGQFSSYEPELYPGLTYRMVLPRVVL 122
Query: 143 LIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
LIF++GKVV+TGAK R ++ A NNIYP+L +
Sbjct: 123 LIFVNGKVVLTGAKNRTELQDALNNIYPILKSF 155
>gi|452819885|gb|EME26936.1| transcription initiation factor TFIID TATA-box-binding protein
[Galdieria sulphuraria]
Length = 206
Score = 208 bits (530), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 105/181 (58%), Positives = 134/181 (74%), Gaps = 5/181 (2%)
Query: 2 APVIQNIVATINLECK-LDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
A I N+V T+NL + LDLK IA+ ARNAEYNP RF AV MR++EPKTTALIFSSGKIV
Sbjct: 27 AAEIVNLVCTVNLGVRNLDLKTIAIKARNAEYNPKRFQAVIMRVREPKTTALIFSSGKIV 86
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFP-VQFKDFKIQNIVGSCDVEFPIKLERLNGFHAM 119
TGAKSE ++K AA+K+ IV+K G+ +F +FK+QN+VG+ V+FPI+LE L H
Sbjct: 87 VTGAKSEEESKRAAKKFVVIVRKCGYEEAKFSEFKVQNVVGTSAVDFPIRLEALAQAHTQ 146
Query: 120 FSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYD 179
F TYEPELFPGL+YRM +P + +LIF+SGK+V+TG K R+QI A I NV VT+
Sbjct: 147 FCTYEPELFPGLVYRMMEPKIVLLIFVSGKLVLTGGKTRKQIDEALEKIK---NVLVTFK 203
Query: 180 Q 180
+
Sbjct: 204 K 204
>gi|37727185|gb|AAO34523.1| TATA-binding protein isoform 4 [Branchiostoma floridae]
Length = 136
Score = 208 bits (529), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 95/130 (73%), Positives = 114/130 (87%)
Query: 44 IKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCD 103
I++P+TTALIFSSGK+VCTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCD
Sbjct: 1 IRDPRTTALIFSSGKMVCTGAKSEDQSRLAARKYARVVQKLGFPCKFLDFKIQNMVGSCD 60
Query: 104 VEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYA 163
V+FPI+LE L HA FS+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK RE+IY
Sbjct: 61 VKFPIRLEGLVLTHAQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVREEIYE 120
Query: 164 AFNNIYPVLN 173
AF IYP+L
Sbjct: 121 AFETIYPILK 130
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 5 IQNIVATINLECKLDLKKIAL-HARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
IQN+V + +++ + L+ + L HA+ + Y P F + R+ +P+ LIF SGK+V TG
Sbjct: 52 IQNMVGSCDVKFPIRLEGLVLTHAQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTG 111
Query: 64 AKSESQ 69
AK +
Sbjct: 112 AKVREE 117
>gi|341886263|gb|EGT42198.1| hypothetical protein CAEBREN_08601 [Caenorhabditis brenneri]
Length = 210
Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 100/170 (58%), Positives = 129/170 (75%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P+I+N+V+TI+L LDL+KIAL+ RN EYNPSRF A MRI+ P+TT LIFSSGKIVC
Sbjct: 38 PIIENVVSTISLGVPLDLEKIALNGRNIEYNPSRFGAAIMRIRNPRTTGLIFSSGKIVCA 97
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE + A+RKYARIV+K+G+ + F+IQNIV +C+V F I L ++ H F T
Sbjct: 98 GAKSEESCRRASRKYARIVEKLGYQAKSVVFEIQNIVATCNVRFSINLGGISFTHLKFCT 157
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
+EPE+FPGL YRM +P VT++IF SGK+ ITGAK +E I AF +IYP+L
Sbjct: 158 FEPEIFPGLHYRMLQPKVTIVIFPSGKLNITGAKNKEDIDTAFRHIYPIL 207
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 5 IQNIVATINLECKLDLKKIAL-HARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
IQNIVAT N+ ++L I+ H + + P F + R+ +PK T +IF SGK+ TG
Sbjct: 130 IQNIVATCNVRFSINLGGISFTHLKFCTFEPEIFPGLHYRMLQPKVTIVIFPSGKLNITG 189
Query: 64 AKSESQAKLAARKYARIVQK 83
AK++ A R I++K
Sbjct: 190 AKNKEDIDTAFRHIYPILRK 209
>gi|357612499|gb|EHJ68033.1| putative TATA binding protein [Danaus plexippus]
Length = 283
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 92/170 (54%), Positives = 130/170 (76%)
Query: 6 QNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAK 65
QN ++T++L+C+L+L I R +EYNP+RF+ V M+I EP+ TAL+F SGKIVCTGAK
Sbjct: 111 QNCISTVSLDCELNLLDIYCRTRFSEYNPARFNGVVMKILEPRATALVFRSGKIVCTGAK 170
Query: 66 SESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEP 125
+ + +AARK+ARI+QK+GFPV+F DFK+ N + + D+ FPIKLE L H F++YEP
Sbjct: 171 NGHDSYIAARKFARIIQKLGFPVKFVDFKVLNFLATADLRFPIKLEALQQAHGQFTSYEP 230
Query: 126 ELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
ELF GL+YRM +P V +LIF++GK+VITGAK +++Y A + I+P+L Y
Sbjct: 231 ELFSGLVYRMIRPRVVLLIFVNGKMVITGAKTNQEVYEAVDIIHPILRSY 280
>gi|403278005|ref|XP_003930626.1| PREDICTED: TATA box-binding protein-like protein 2 [Saimiri
boliviensis boliviensis]
Length = 381
Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 103/179 (57%), Positives = 127/179 (70%), Gaps = 5/179 (2%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRI----KEPKTTALIFSS 56
+ P +QNIV+T+NL CKLDLKKIALHA+NAEYNP + I +P +
Sbjct: 201 IVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNP-KLCGEPWHIFSYDYQPNLPCVKPLR 259
Query: 57 GKIVCTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGF 116
A E Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L
Sbjct: 260 SFTSPGSANCEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVKFPIRLEGLVLT 319
Query: 117 HAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
H FS+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R +I AF NIYP+L +
Sbjct: 320 HQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEICEAFENIYPILKSF 378
>gi|432937597|ref|XP_004082456.1| PREDICTED: LOW QUALITY PROTEIN: TATA box-binding protein-like
protein 2-like [Oryzias latipes]
Length = 354
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/177 (58%), Positives = 128/177 (72%), Gaps = 2/177 (1%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+ L C LDLK IA ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 175 IVPQLQNIVSTVTLGCPLDLKFIARQARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 234
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE +++LAARKYAR+VQK+GF +F +FKIQN+V SCDV FPI+LE L H F
Sbjct: 235 CTGAKSEEESRLAARKYARVVQKLGFSARFLEFKIQNMVASCDVCFPIRLEGLVLTHQQF 294
Query: 121 STYEPELFPGLIYRMKK-PNVTMLIFLSG-KVVITGAKAREQIYAAFNNIYPVLNVY 175
S Y+ P + P + + FL VV+TGAK R +IY AF NIYP+L +
Sbjct: 295 SRYQSHQHPTNSWTSCXFPKMLLCFFLDHISVVLTGAKERAEIYEAFENIYPILKGF 351
>gi|307180303|gb|EFN68336.1| TATA-box-binding protein [Camponotus floridanus]
Length = 252
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/184 (54%), Positives = 134/184 (72%), Gaps = 11/184 (5%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QN+V+T NL +L L I + RN+EYNP+RF+ + MRI+ P+ TALIFSSGK+VCT
Sbjct: 66 PCLQNVVSTANLGTELKLNYINIRTRNSEYNPARFTGLIMRIRNPRATALIFSSGKLVCT 125
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQF--KDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
GAKSE+ + LAA+++ARI+QK+GFPV+F FK+QNIV +CDV+FPIKLE L H
Sbjct: 126 GAKSENDSFLAAKRFARIIQKLGFPVKFMSDSFKVQNIVATCDVKFPIKLENLYREHPQL 185
Query: 121 STYEPELFPGLIYRMKKPN---------VTMLIFLSGKVVITGAKAREQIYAAFNNIYPV 171
+YEPEL+PGLIYR+ P V +LIF++GKVV+TGAK +++ A N +YPV
Sbjct: 186 CSYEPELYPGLIYRVYIPGNRDNPPISKVVLLIFVNGKVVLTGAKNIDELRNALNLMYPV 245
Query: 172 LNVY 175
L Y
Sbjct: 246 LMQY 249
>gi|119187015|ref|XP_001244114.1| hypothetical protein CIMG_03555 [Coccidioides immitis RS]
Length = 137
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 94/134 (70%), Positives = 113/134 (84%)
Query: 42 MRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGS 101
MRI+EPKTTALIF+SGK+V TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGS
Sbjct: 1 MRIREPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGS 60
Query: 102 CDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQI 161
CD++FPI+LE L H FS+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+I
Sbjct: 61 CDIKFPIRLEGLASRHHNFSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEI 120
Query: 162 YAAFNNIYPVLNVY 175
Y AF IYPVL +
Sbjct: 121 YQAFEMIYPVLTDF 134
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARN-AEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
IQNIV + +++ + L+ +A N + Y P F + R+ +PK LIF SGKIV TG
Sbjct: 54 IQNIVGSCDIKFPIRLEGLASRHHNFSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTG 113
Query: 64 AKSESQ 69
AK +
Sbjct: 114 AKVREE 119
>gi|219113475|ref|XP_002186321.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209583171|gb|ACI65791.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 203
Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 99/169 (58%), Positives = 125/169 (73%), Gaps = 1/169 (0%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+ +T+NL +LDLKKIAL RN E+NP RF AV MR++EP+ TALIFSSGK+ TG
Sbjct: 4 IQNMSSTVNLGTRLDLKKIALKCRNTEFNPRRFGAVIMRLREPRATALIFSSGKMCVTGV 63
Query: 65 KSESQAKLAARKYARIVQKIGF-PVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KS A LAA+K+A IV+++GF P + DFK+QNIVG+ DV FPI+LE L H+ F++Y
Sbjct: 64 KSTHNANLAAKKFAYIVERVGFKPKENIDFKVQNIVGTADVGFPIRLEGLVYAHSAFASY 123
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPELFPGLIYR P V LIF+SGK+VITGAK + A ++PVL
Sbjct: 124 EPELFPGLIYRFVNPRVVFLIFVSGKIVITGAKKEMDLAHALTKLFPVL 172
>gi|326497179|dbj|BAK02174.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 137
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 94/134 (70%), Positives = 113/134 (84%)
Query: 42 MRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGS 101
MRI+EPKTTALIF+SGK+V TGAKSE +KLA+RKYARI+QK+GF +F DFKIQNIVGS
Sbjct: 1 MRIREPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGS 60
Query: 102 CDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQI 161
CD++FPI+LE L H FS+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK RE+I
Sbjct: 61 CDIKFPIRLEGLASRHHNFSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEI 120
Query: 162 YAAFNNIYPVLNVY 175
Y AF IYPVL +
Sbjct: 121 YQAFEMIYPVLQDF 134
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARN-AEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
IQNIV + +++ + L+ +A N + Y P F + R+ +PK LIF SGKIV TG
Sbjct: 54 IQNIVGSCDIKFPIRLEGLASRHHNFSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTG 113
Query: 64 AKSESQ 69
AK +
Sbjct: 114 AKVREE 119
>gi|281203489|gb|EFA77689.1| TATA-binding protein [Polysphondylium pallidum PN500]
Length = 192
Score = 202 bits (514), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 119/175 (68%), Gaps = 34/175 (19%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ PV+QNIV+T+N+ +LDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF SGK+V
Sbjct: 26 IVPVLQNIVSTVNMGTQLDLKTIALGARNAEYNPKRFAAVIMRIREPKTTALIFKSGKMV 85
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE +KLAARKYARI+QK+ FP QF DFKIQNIVGSCDV+FPIKLE LN H F
Sbjct: 86 CTGAKSEEASKLAARKYARIIQKLDFPAQFTDFKIQNIVGSCDVKFPIKLEMLNNTHNSF 145
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
+ NV RE+IY AF NIYPVL Y
Sbjct: 146 T-----------------NV-----------------REEIYEAFENIYPVLTTY 166
>gi|395330269|gb|EJF62653.1| TBP-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 137
Score = 201 bits (512), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 94/131 (71%), Positives = 112/131 (85%)
Query: 42 MRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGS 101
MRI++PKTTALIF+SGK+V TGAKSE ++LA+RKYARIVQK+GF +F +FKIQNIVGS
Sbjct: 1 MRIRDPKTTALIFASGKMVVTGAKSEDDSRLASRKYARIVQKLGFDAKFSEFKIQNIVGS 60
Query: 102 CDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQI 161
CDV+FPI+LE L H FS+YEPELFPGLIYRM KP V +LIF+SGK+V+TGAK RE+I
Sbjct: 61 CDVKFPIRLEGLAYSHGQFSSYEPELFPGLIYRMIKPKVVLLIFVSGKIVLTGAKVREEI 120
Query: 162 YAAFNNIYPVL 172
Y AFN IY VL
Sbjct: 121 YTAFNTIYTVL 131
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 5 IQNIVATINLECKLDLKKIAL-HARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
IQNIV + +++ + L+ +A H + + Y P F + R+ +PK LIF SGKIV TG
Sbjct: 54 IQNIVGSCDVKFPIRLEGLAYSHGQFSSYEPELFPGLIYRMIKPKVVLLIFVSGKIVLTG 113
Query: 64 AKSESQ 69
AK +
Sbjct: 114 AKVREE 119
>gi|224009416|ref|XP_002293666.1| transcription factor IID, TATA box binding protein [Thalassiosira
pseudonana CCMP1335]
gi|220970338|gb|EED88675.1| transcription factor IID, TATA box binding protein [Thalassiosira
pseudonana CCMP1335]
Length = 167
Score = 201 bits (512), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 95/163 (58%), Positives = 123/163 (75%), Gaps = 1/163 (0%)
Query: 11 TINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQA 70
T +L +LDLK+IAL RN E+NP RF+AV MR++EP+ TAL+FSSG++V TG KS
Sbjct: 1 TADLGVRLDLKQIALRCRNTEFNPRRFAAVIMRLREPRATALLFSSGRMVITGTKSSHNC 60
Query: 71 KLAARKYARIVQKIGF-PVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFP 129
LA +K+A I++++GF P F DFKIQN+VG+ DV FPI+LE + H FS+YEPELFP
Sbjct: 61 SLATKKFAYILERVGFQPAGFIDFKIQNVVGTVDVGFPIRLEGVVYAHPTFSSYEPELFP 120
Query: 130 GLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
GLIYR+ +P V +LIF+SGKVVITGAK EQ+ A +YPVL
Sbjct: 121 GLIYRLVQPRVVLLIFVSGKVVITGAKTEEQMVEALRKVYPVL 163
>gi|118789378|ref|XP_317373.3| AGAP008084-PA [Anopheles gambiae str. PEST]
gi|116123189|gb|EAA12691.4| AGAP008084-PA [Anopheles gambiae str. PEST]
Length = 200
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 87/146 (59%), Positives = 116/146 (79%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+++N VAT+++ C+L+LK I RN+EYNPSRF V MRI++P+ TAL+F SGK++CTG
Sbjct: 55 LVRNCVATVSVGCELNLKTINFRTRNSEYNPSRFHGVVMRIRDPRCTALVFRSGKVICTG 114
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
AK+E QA L RK+ RI+QK+GF V+F DFK+QN+V + D+ FPI+LE LN H FS+Y
Sbjct: 115 AKNEQQAHLGLRKFVRIIQKLGFDVKFLDFKVQNLVATADLRFPIRLENLNQVHGQFSSY 174
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGK 149
EPELFPGLIYRM KP V +LIF++GK
Sbjct: 175 EPELFPGLIYRMVKPRVVLLIFVNGK 200
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 95 IQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITG 154
++N V + V + L+ +N F S Y P F G++ R++ P T L+F SGKV+ TG
Sbjct: 56 VRNCVATVSVGCELNLKTIN-FRTRNSEYNPSRFHGVVMRIRDPRCTALVFRSGKVICTG 114
Query: 155 AKAREQIYAAF 165
AK +Q +
Sbjct: 115 AKNEQQAHLGL 125
>gi|67479107|ref|XP_654935.1| TATA binding protein [Entamoeba histolytica HM-1:IMSS]
gi|296439771|sp|A7UFC2.1|TBPL1_ENTHI RecName: Full=TATA-box-binding protein-like protein 1; Short=EhTRF1
gi|56472030|gb|EAL49549.1| TATA binding protein, putative [Entamoeba histolytica HM-1:IMSS]
gi|155007635|gb|ABS89251.1| TBP-related factor [Entamoeba histolytica]
gi|407041324|gb|EKE40663.1| transcription initiation factor TFIID family protein [Entamoeba
nuttalli P19]
gi|449703269|gb|EMD43751.1| TBPrelated factor, putative [Entamoeba histolytica KU27]
Length = 216
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 91/170 (53%), Positives = 123/170 (72%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
PVIQNIVAT+ L+C ++L+ + RNAEYNP RF A+ +RI PKTTAL+F SGK+V T
Sbjct: 39 PVIQNIVATVELDCTINLQDVVRRVRNAEYNPKRFGALIIRITNPKTTALVFHSGKLVVT 98
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
G K+ ++LA RKYARI+Q++G+ V+F FKIQN+V SCD++F I L+ L +
Sbjct: 99 GGKTVDDSRLAGRKYARILQRLGYNVKFNHFKIQNVVASCDMKFAISLKELIQLAPKITK 158
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPE+FPG++YR+ P + +LIF SGK+V TG K EQI AF+ IY +L
Sbjct: 159 YEPEIFPGVVYRLADPKMVLLIFASGKIVFTGGKEIEQINKAFSEIYKIL 208
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 5 IQNIVATINLECKLDLKK-IALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
IQN+VA+ +++ + LK+ I L + +Y P F V R+ +PK LIF+SGKIV TG
Sbjct: 131 IQNVVASCDMKFAISLKELIQLAPKITKYEPEIFPGVVYRLADPKMVLLIFASGKIVFTG 190
Query: 64 AKSESQAKLAARKYARIVQKIG 85
K Q A + +I+ ++
Sbjct: 191 GKEIEQINKAFSEIYKILLQVA 212
>gi|167386161|ref|XP_001737643.1| TATA-box-binding protein [Entamoeba dispar SAW760]
gi|165899478|gb|EDR26064.1| TATA-box-binding protein, putative [Entamoeba dispar SAW760]
Length = 216
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 91/170 (53%), Positives = 123/170 (72%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
PVIQNIVAT+ L+C ++L+ + RNAEYNP RF A+ +RI PKTTAL+F SGK+V T
Sbjct: 39 PVIQNIVATVELDCTINLQDVVRRVRNAEYNPKRFGALIIRITNPKTTALVFHSGKLVVT 98
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
G K+ ++LA RKYARI+Q++G+ V+F FKIQN+V SCD++F I L+ L +
Sbjct: 99 GGKTVDDSRLAGRKYARILQRLGYNVKFNHFKIQNVVASCDMKFAISLKELIQLAPKITK 158
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPE+FPG++YR+ P + +LIF SGK+V TG K EQI AF+ IY +L
Sbjct: 159 YEPEIFPGVVYRLADPKMVLLIFASGKIVFTGGKEIEQINKAFSEIYKIL 208
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 5 IQNIVATINLECKLDLKK-IALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
IQN+VA+ +++ + LK+ I L + +Y P F V R+ +PK LIF+SGKIV TG
Sbjct: 131 IQNVVASCDMKFAISLKELIQLAPKITKYEPEIFPGVVYRLADPKMVLLIFASGKIVFTG 190
Query: 64 AKSESQAKLAARKYARIVQKIG 85
K Q A + +I+ ++
Sbjct: 191 GKEIEQINKAFSEIYKILLQVA 212
>gi|440295403|gb|ELP88316.1| TATA-box-binding protein, putative [Entamoeba invadens IP1]
Length = 236
Score = 198 bits (503), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 89/170 (52%), Positives = 122/170 (71%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P+IQNIVAT+ L+C ++L+ + RNAEYNP RF A+ +RI PKTTAL+F SGK+V T
Sbjct: 59 PIIQNIVATVELDCNVNLQDVVRRVRNAEYNPKRFGALIIRITNPKTTALVFHSGKLVIT 118
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
G K+ ++LA RKYARI+Q++G+ V+F FK+QN+V SCD++F I L L +
Sbjct: 119 GGKTIDDSRLAGRKYARILQRLGYEVKFNHFKVQNVVASCDMKFAISLRDLITLSPKNTK 178
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPE+FPG++YR+ +P + +LIF SGK+V TG K EQI AF IY +L
Sbjct: 179 YEPEIFPGVVYRLAEPKMVLLIFASGKIVFTGGKEVEQINQAFKTIYKIL 228
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 5 IQNIVATINLECKLDLKK-IALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+QN+VA+ +++ + L+ I L +N +Y P F V R+ EPK LIF+SGKIV TG
Sbjct: 151 VQNVVASCDMKFAISLRDLITLSPKNTKYEPEIFPGVVYRLAEPKMVLLIFASGKIVFTG 210
Query: 64 AKSESQAKLAARKYARIVQKIG 85
K Q A + +I+ ++
Sbjct: 211 GKEVEQINQAFKTIYKILLQVA 232
>gi|407813853|gb|AFU35092.1| TATA box binding protein, partial [Tetranychus urticae]
Length = 122
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 91/122 (74%), Positives = 108/122 (88%)
Query: 34 PSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGFPVQFKDF 93
P RF+AV MRI+EP+TTALIFSSGK+VCTGAKSE Q++LAARKYARIVQK+GF +F DF
Sbjct: 1 PKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARIVQKLGFDAKFLDF 60
Query: 94 KIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVIT 153
KIQN+VGSCDV+FPI+LE L H+ FS+YEPELFPGLIYRM KP + +LIF+SGKVV+T
Sbjct: 61 KIQNMVGSCDVKFPIRLEGLVLTHSQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 120
Query: 154 GA 155
GA
Sbjct: 121 GA 122
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 5 IQNIVATINLECKLDLKKIAL-HARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
IQN+V + +++ + L+ + L H++ + Y P F + R+ +P+ LIF SGK+V TG
Sbjct: 62 IQNMVGSCDVKFPIRLEGLVLTHSQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTG 121
Query: 64 A 64
A
Sbjct: 122 A 122
Score = 42.0 bits (97), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 125 PELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQ 160
P+ F +I R+++P T LIF SGK+V TGAK+ EQ
Sbjct: 1 PKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQ 36
>gi|67611070|ref|XP_667132.1| TATA-binding protein [Cryptosporidium hominis TU502]
gi|54658235|gb|EAL36903.1| TATA-binding protein [Cryptosporidium hominis]
Length = 249
Score = 195 bits (495), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 131/180 (72%), Gaps = 5/180 (2%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P IQNI+A+++L+C+LDL+ IA+ ARNAEYNP + +AV MR+++PK T L+F SG+++
Sbjct: 68 ITPEIQNIIASVHLQCELDLRMIAISARNAEYNPKKVNAVVMRLRDPKCTGLLFRSGRLM 127
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFP-VQFKDFKIQNIVGSCDVEFPIKLERLNGFHAM 119
TGA+ E+ AKL +K A+I QK GFP V+F +FK++NI+ + D +FPI+LE L H
Sbjct: 128 ITGARLENDAKLGGKKMAKICQKSGFPKVKFTNFKMENIIATADCKFPIRLEGLAYDHRD 187
Query: 120 FSTYEPELFPGLIYRMKKPN----VTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
F YEPELFPGL+YR N +L+F+SGKV++TG K ++I F+NIYPVL Y
Sbjct: 188 FCNYEPELFPGLVYRYHPDNSPTKAVLLLFVSGKVIVTGCKNYQEICNVFDNIYPVLCQY 247
>gi|66359858|ref|XP_627107.1| TATA-box factor binding protein [Cryptosporidium parvum Iowa II]
gi|38491418|gb|AAR21861.1| TATA-binding protein [Cryptosporidium parvum]
gi|46228532|gb|EAK89402.1| TATA-box factor binding protein [Cryptosporidium parvum Iowa II]
gi|323509817|dbj|BAJ77801.1| cgd8_2030 [Cryptosporidium parvum]
Length = 249
Score = 195 bits (495), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 131/180 (72%), Gaps = 5/180 (2%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P IQNI+A+++L+C+LDL+ IA+ ARNAEYNP + +AV MR+++PK T L+F SG+++
Sbjct: 68 ITPEIQNIIASVHLQCELDLRMIAISARNAEYNPKKVNAVVMRLRDPKCTGLLFRSGRLM 127
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFP-VQFKDFKIQNIVGSCDVEFPIKLERLNGFHAM 119
TGA+ E+ AKL +K A+I QK GFP V+F +FK++NI+ + D +FPI+LE L H
Sbjct: 128 ITGARLENDAKLGGKKMAKICQKSGFPKVKFTNFKMENIIATADCKFPIRLEGLAYDHRD 187
Query: 120 FSTYEPELFPGLIYRMKKPN----VTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
F YEPELFPGL+YR N +L+F+SGKV++TG K ++I F+NIYPVL Y
Sbjct: 188 FCNYEPELFPGLVYRYHPDNSPTKAVLLLFVSGKVIVTGCKNYQEICNVFDNIYPVLCQY 247
>gi|222433591|gb|ACM51140.1| TATA box binding protein [Tetranychus cinnabarinus]
Length = 122
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 90/122 (73%), Positives = 107/122 (87%)
Query: 34 PSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGFPVQFKDF 93
P F+AV MRI+EP+TTALIFSSGK+VCTGAKSE Q++LAARKYARIVQK+GF +F DF
Sbjct: 1 PKSFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARIVQKLGFDAKFLDF 60
Query: 94 KIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVIT 153
KIQN+VGSCDV+FPI+LE L H+ FS+YEPELFPGLIYRM KP + +LIF+SGKVV+T
Sbjct: 61 KIQNMVGSCDVKFPIRLEGLVLTHSQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT 120
Query: 154 GA 155
GA
Sbjct: 121 GA 122
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 5 IQNIVATINLECKLDLKKIAL-HARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
IQN+V + +++ + L+ + L H++ + Y P F + R+ +P+ LIF SGK+V TG
Sbjct: 62 IQNMVGSCDVKFPIRLEGLVLTHSQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTG 121
Query: 64 A 64
A
Sbjct: 122 A 122
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 125 PELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQ 160
P+ F +I R+++P T LIF SGK+V TGAK+ EQ
Sbjct: 1 PKSFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQ 36
>gi|378755540|gb|EHY65566.1| TATA-binding protein, partial [Nematocida sp. 1 ERTm2]
Length = 159
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 89/137 (64%), Positives = 116/137 (84%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P IQNIVAT+NL C+LDLK IAL ARNAEYNP RF+AV +RI++P+TTALIF+SGK+V
Sbjct: 23 LIPTIQNIVATVNLCCRLDLKAIALGARNAEYNPKRFAAVIIRIRKPRTTALIFASGKMV 82
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
TGA+SE +K+AA+KY+ I++++G+PV+F +FKIQNIV SCD +F I+LE L H+ +
Sbjct: 83 VTGARSEEDSKMAAKKYSIIIRRLGYPVRFTEFKIQNIVSSCDTKFSIRLEGLVFGHSNY 142
Query: 121 STYEPELFPGLIYRMKK 137
S+YEPELFPGLIYRM K
Sbjct: 143 SSYEPELFPGLIYRMVK 159
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 95 IQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITG 154
IQNIV + ++ + L+ + A + Y P+ F +I R++KP T LIF SGK+V+TG
Sbjct: 27 IQNIVATVNLCCRLDLKAI-ALGARNAEYNPKRFAAVIIRIRKPRTTALIFASGKMVVTG 85
Query: 155 AKAREQ 160
A++ E
Sbjct: 86 ARSEED 91
>gi|67473541|ref|XP_652533.1| transcription initiation factor TFIID [Entamoeba histolytica
HM-1:IMSS]
gi|296439770|sp|C4M7H7.1|TBP2_ENTHI RecName: Full=TATA-box-binding protein 2; Short=EhTBP2; AltName:
Full=TATA sequence-binding protein; AltName:
Full=TATA-binding factor; AltName: Full=TATA-box factor;
AltName: Full=Transcription initiation factor TFIID TBP
subunit
gi|56469391|gb|EAL47145.1| transcription initiation factor TFIID, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 212
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 95/170 (55%), Positives = 127/170 (74%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P I N+V+T L KL+L+KI ARNAEYNP RF+ MRI PK+TALIF +GKIVCT
Sbjct: 32 PEIVNVVSTFQLGVKLELRKIVQKARNAEYNPKRFAGAIMRISSPKSTALIFQTGKIVCT 91
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
G +S ++K+A++KYA+I++KIG+P+ + +F +QNIVGSCDV+F I L L + F
Sbjct: 92 GTRSIEESKIASKKYAKIIKKIGYPIHYSNFNVQNIVGSCDVKFQIALRTLVDSYLAFCQ 151
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPE+FPGL+YRM P VT+L+F +GKVV+TGAK E + A+ NIYP+L
Sbjct: 152 YEPEVFPGLVYRMASPKVTLLVFSTGKVVLTGAKDEESLNLAYKNIYPIL 201
>gi|167387403|ref|XP_001738146.1| TATA-box-binding protein [Entamoeba dispar SAW760]
gi|165898721|gb|EDR25505.1| TATA-box-binding protein [Entamoeba dispar SAW760]
Length = 212
Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 95/170 (55%), Positives = 127/170 (74%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P I N+V+T L KL+L+KI ARNAEYNP RF+ MRI PK+TALIF +GKIVCT
Sbjct: 32 PEIVNVVSTFQLGVKLELRKIVQKARNAEYNPKRFAGAIMRISSPKSTALIFQTGKIVCT 91
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
G +S ++K+A++KYA+I++KIG+P+ + +F +QNIVGSCDV+F I L L + F
Sbjct: 92 GTRSIEESKIASKKYAKIIKKIGYPIHYSNFNVQNIVGSCDVKFQIALRALVDSYLAFCQ 151
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPE+FPGL+YRM P VT+L+F +GKVV+TGAK E + A+ NIYP+L
Sbjct: 152 YEPEVFPGLVYRMASPKVTLLVFSTGKVVLTGAKDEESLNLAYKNIYPIL 201
>gi|367033977|ref|XP_003666271.1| hypothetical protein MYCTH_2310794 [Myceliophthora thermophila ATCC
42464]
gi|347013543|gb|AEO61026.1| hypothetical protein MYCTH_2310794 [Myceliophthora thermophila ATCC
42464]
Length = 242
Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 93/170 (54%), Positives = 130/170 (76%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P IQN+VAT +LEC+LDL+ IA HARN EYN +F A+ MRI+EP+TT L+F+SG++V T
Sbjct: 52 PTIQNVVATASLECRLDLQAIAQHARNVEYNRRKFHALVMRIREPRTTTLVFASGRMVVT 111
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKS A+LAAR++AR +QK GFP + DF++QN VGS F ++LER++ + +
Sbjct: 112 GAKSAGLARLAARRHARAIQKCGFPTRLADFRVQNFVGSAACGFLVRLERISHRYWQSAR 171
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
+EPELFPGL+Y M +P++ L+F +GKVV+TGAK RE ++ AF N+YP+L
Sbjct: 172 HEPELFPGLVYTMVRPSLKCLVFTTGKVVLTGAKKREDVFEAFANLYPLL 221
>gi|183235483|ref|XP_001914239.1| transcription initiation factor TFIID [Entamoeba histolytica
HM-1:IMSS]
gi|3915894|sp|P52653.2|TBP1_ENTHI RecName: Full=TATA-box-binding protein 1; Short=EhTBP; AltName:
Full=TATA sequence-binding protein; AltName:
Full=TATA-binding factor; AltName: Full=TATA-box factor;
AltName: Full=Transcription initiation factor TFIID TBP
subunit
gi|3201503|emb|CAA88304.1| TATA box-binding protein [Entamoeba histolytica]
gi|169800528|gb|EDS88986.1| transcription initiation factor TFIID, putative [Entamoeba
histolytica HM-1:IMSS]
gi|449703333|gb|EMD43805.1| transcription initiation factor tfiid, putative [Entamoeba
histolytica KU27]
Length = 234
Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 95/170 (55%), Positives = 127/170 (74%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P I N+V+T L KL+L+KI ARNAEYNP RF+ MRI PK+TALIF +GKIVCT
Sbjct: 54 PEIVNVVSTFQLGVKLELRKIVQKARNAEYNPKRFAGAIMRISSPKSTALIFQTGKIVCT 113
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
G +S ++K+A++KYA+I++KIG+P+ + +F +QNIVGSCDV+F I L L + F
Sbjct: 114 GTRSIEESKIASKKYAKIIKKIGYPIHYSNFNVQNIVGSCDVKFQIALRTLVDSYLAFCQ 173
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPE+FPGL+YRM P VT+L+F +GKVV+TGAK E + A+ NIYP+L
Sbjct: 174 YEPEVFPGLVYRMASPKVTLLVFSTGKVVLTGAKDEESLNLAYKNIYPIL 223
>gi|431904621|gb|ELK10003.1| TATA-box-binding protein [Pteropus alecto]
Length = 193
Score = 192 bits (487), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 88/120 (73%), Positives = 104/120 (86%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 62 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 121
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
CTGAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H F
Sbjct: 122 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 181
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 94 KIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVIT 153
++QNIV + ++ + L+ + A + Y P+ F +I R+++P T LIF SGK+V T
Sbjct: 65 QLQNIVSTVNLGCKLDLKTI-ALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 123
Query: 154 GAKAREQ 160
GAK+ EQ
Sbjct: 124 GAKSEEQ 130
>gi|351694348|gb|EHA97266.1| TATA box-binding protein-like protein 2 [Heterocephalus glaber]
Length = 354
Score = 191 bits (486), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 88/118 (74%), Positives = 103/118 (87%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLKKIALHA+NAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 208 PQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 267
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
GAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV F I+LE L H F
Sbjct: 268 GAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVRFSIRLEGLVLTHQQF 325
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 94 KIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVIT 153
++QNIV + ++ + L+++ HA + Y P+ F +I R+++P T LIF SGK+V T
Sbjct: 209 QLQNIVSTVNLACKLDLKKI-ALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 267
Query: 154 GAKAREQ 160
GAK+ EQ
Sbjct: 268 GAKSEEQ 274
>gi|167387263|ref|XP_001738088.1| TATA-box-binding protein [Entamoeba dispar SAW760]
gi|165898834|gb|EDR25598.1| TATA-box-binding protein, putative [Entamoeba dispar SAW760]
Length = 234
Score = 191 bits (486), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 95/170 (55%), Positives = 127/170 (74%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P I N+V+T L KL+L+KI ARNAEYNP RF+ MRI PK+TALIF +GKIVCT
Sbjct: 54 PEIVNVVSTFQLGVKLELRKIVQKARNAEYNPKRFAGAIMRISSPKSTALIFQTGKIVCT 113
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
G +S ++K+A++KYA+I++KIG+P+ + +F +QNIVGSCDV+F I L L + F
Sbjct: 114 GTRSIEESKIASKKYAKIIKKIGYPIHYSNFNVQNIVGSCDVKFQIALRALVDSYLAFCQ 173
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPE+FPGL+YRM P VT+L+F +GKVV+TGAK E + A+ NIYP+L
Sbjct: 174 YEPEVFPGLVYRMASPKVTLLVFSTGKVVLTGAKDEESLNLAYKNIYPIL 223
>gi|209877002|ref|XP_002139943.1| TATA-box-binding protein [Cryptosporidium muris RN66]
gi|209555549|gb|EEA05594.1| TATA-box-binding protein, putative [Cryptosporidium muris RN66]
Length = 211
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 86/178 (48%), Positives = 131/178 (73%), Gaps = 5/178 (2%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P IQNI+A+++L+C+LDL+ IA+ ARNAEYNP + +AV MR++EP+ T L+F SG+++ T
Sbjct: 32 PEIQNIIASVHLQCELDLRSIAISARNAEYNPKKVNAVVMRLREPRCTGLLFRSGRMMIT 91
Query: 63 GAKSESQAKLAARKYARIVQKIGFP-VQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFS 121
GA++E+ A+ +K A+I QK G P V+F +F+++N++ + D +FPI+LE L H F
Sbjct: 92 GARNENDARYGGKKMAKICQKSGHPRVKFSNFRMENMIATADCKFPIRLEGLAYDHREFC 151
Query: 122 TYEPELFPGLIYRMKKPN----VTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPELFPGL+YR N +L+F+SGKV++TG ++ ++I + F+NIYPVL Y
Sbjct: 152 NYEPELFPGLVYRYHPENSPTKAVILLFVSGKVIVTGCRSYKEICSVFDNIYPVLCQY 209
>gi|389748066|gb|EIM89244.1| TATA-box binding protein-like protein [Stereum hirsutum FP-91666
SS1]
Length = 249
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/172 (56%), Positives = 122/172 (70%), Gaps = 14/172 (8%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +Q IV T+NL+C+LDLK IALHARNAEY P F+A+ + I++PK TALIF SGK++
Sbjct: 46 IVPTLQTIVVTVNLDCRLDLKTIALHARNAEYTPKCFAAIIVCIRDPKMTALIFPSGKMI 105
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
T AKSE ++LA RKYARIVQK+GF +F +FKIQNIV SCD++F I+LE L +
Sbjct: 106 VTDAKSEDDSRLAPRKYARIVQKLGFNAKFSEFKIQNIVRSCDIKFFIRLEGL-----AY 160
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
T LFPGLIYRM KP V +LIF+S RE+IY AFN +Y VL
Sbjct: 161 ITGSSALFPGLIYRMIKPKVVLLIFVS---------VREEIYTAFNTVYTVL 203
>gi|126723804|gb|ABO26816.1| TATA-box binding protein, partial [Perna canaliculus]
Length = 111
Score = 185 bits (470), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 86/110 (78%), Positives = 98/110 (89%)
Query: 16 CKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAAR 75
CKLDLK+IALHARNAEYNP RF+AV MRI++P+TTALIFSSGK+VCTGAKSE QAKLAAR
Sbjct: 2 CKLDLKRIALHARNAEYNPKRFAAVIMRIRDPRTTALIFSSGKMVCTGAKSEDQAKLAAR 61
Query: 76 KYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEP 125
KYARIVQK+GF +F DFKIQN+VGSCDV+FPI+LE L H FS+YEP
Sbjct: 62 KYARIVQKLGFAAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQFSSYEP 111
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 108 IKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQ 160
+ L+R+ HA + Y P+ F +I R++ P T LIF SGK+V TGAK+ +Q
Sbjct: 4 LDLKRI-ALHARNAEYNPKRFAAVIMRIRDPRTTALIFSSGKMVCTGAKSEDQ 55
>gi|145494864|ref|XP_001433426.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400543|emb|CAK66029.1| unnamed protein product [Paramecium tetraurelia]
Length = 208
Score = 185 bits (469), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 96/181 (53%), Positives = 125/181 (69%), Gaps = 4/181 (2%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P IQN+V+T++L +L+L I+ AR AEYNP RFSAV MR+ P TTALIF SGK+VCT
Sbjct: 25 PKIQNVVSTVDLGTELNLVVISNGARMAEYNPKRFSAVIMRLNNPSTTALIFQSGKMVCT 84
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERL--NGFHAMF 120
GAKSE Q+ +AARKYA+I+QK+GFP FK+F IQNIV S D PIKL+ + +
Sbjct: 85 GAKSEDQSLVAARKYAKIIQKLGFPAVFKNFTIQNIVASFDFRKPIKLDEFTKDQQYRPV 144
Query: 121 STYEPELFPGLIYR--MKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTY 178
YEPE+FPGLI+R + +T+LIF+SG+ VITG K E + F I P+L+ +
Sbjct: 145 VQYEPEIFPGLIFRKITDQKKITLLIFVSGRCVITGGKKTEDLNNVFKFILPILDQFKKR 204
Query: 179 D 179
D
Sbjct: 205 D 205
>gi|1078776|pir||S52407 TATA box-binding protein - Entamoeba histolytica
Length = 233
Score = 181 bits (460), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 92/170 (54%), Positives = 123/170 (72%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P I N+V+ L KL+L+KI A NA YNP RF+ MRI PK+TALIF +GKIVCT
Sbjct: 53 PEIVNVVSRFQLGVKLELRKIVQKAINAIYNPKRFAGAIMRISSPKSTALIFQTGKIVCT 112
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
G +S ++K+A++KYA+I++KIG+P+ + +F +QNIVGSCDV+F I L L F
Sbjct: 113 GTRSIEESKIASKKYAKIIKKIGYPIHYSNFNVQNIVGSCDVKFQIALRTLVDSDLAFCQ 172
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPE+FPGL+YRM P VT+L+F +GKVV+TGAK E + A+ NIYP+L
Sbjct: 173 YEPEVFPGLVYRMASPKVTLLVFSTGKVVLTGAKDEESLNLAYKNIYPIL 222
>gi|398412558|ref|XP_003857600.1| hypothetical protein MYCGRDRAFT_32491 [Zymoseptoria tritici IPO323]
gi|339477485|gb|EGP92576.1| hypothetical protein MYCGRDRAFT_32491 [Zymoseptoria tritici IPO323]
Length = 177
Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 88/175 (50%), Positives = 116/175 (66%), Gaps = 7/175 (4%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
M P + N+VA +NL C+LDLK IAL RNA Y P RF AV +R +EP++TALIF SGK+
Sbjct: 1 MRPQVHNVVAGVNLNCRLDLKHIALSVRNASYRPKRFPAVVVRQREPRSTALIFRSGKMQ 60
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERL---NGFH 117
G KS A+LA RK+AR++QK+G+ +F+DF +QN+V + D I LE L G H
Sbjct: 61 IVGTKSVDDARLAGRKFARMLQKLGYQPRFEDFTVQNMVANVDTRMTIHLEGLMLTPGTH 120
Query: 118 AMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPELFPG +RM P VT L+F SGKVV+ AK E ++ A++ YP+L
Sbjct: 121 ----NYEPELFPGAAFRMVDPLVTFLVFHSGKVVLLKAKNEEDMHEAWDKFYPLL 171
>gi|367044928|ref|XP_003652844.1| hypothetical protein THITE_2046631 [Thielavia terrestris NRRL 8126]
gi|347000106|gb|AEO66508.1| hypothetical protein THITE_2046631 [Thielavia terrestris NRRL 8126]
Length = 224
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/173 (50%), Positives = 127/173 (73%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P IQN+VAT+NL+C+LDL IA ARN EY +F A+ MRI+EP+TT L+F+SG++V
Sbjct: 46 PQIQNVVATVNLDCRLDLTLIAQQARNVEYRRKKFHALVMRIREPRTTTLVFASGRMVVA 105
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKS A+LAAR++AR +QK GF +F+DF +QN VGS FPI+LE + + ++
Sbjct: 106 GAKSAELARLAARRHARAIQKCGFRTRFRDFAVQNFVGSAACGFPIRLEGIARQYWEWAR 165
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
+EPE+FPGL++ ++KP++ L+F +GKVV+TGAK + ++ AF +YPVL Y
Sbjct: 166 HEPEIFPGLVFTVQKPSLKCLVFTTGKVVLTGAKCEDDVHEAFAYLYPVLLDY 218
>gi|171691522|ref|XP_001910686.1| hypothetical protein [Podospora anserina S mat+]
gi|170945709|emb|CAP71822.1| unnamed protein product [Podospora anserina S mat+]
Length = 223
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/180 (47%), Positives = 126/180 (70%), Gaps = 10/180 (5%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QN V T+NL+C++DL +A ARN EY P RF+AV MRI++P+TTALIF++G++V T
Sbjct: 29 PKLQNFVVTVNLDCRIDLNYLAQRARNVEYRPRRFNAVIMRIRDPRTTALIFATGRMVVT 88
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERL-NGFHAMFS 121
GAKSE+ A+LAA+K+ +QK GF +F+DF +QNI+GS +V F I+LE L N + + +
Sbjct: 89 GAKSEALARLAAKKHTYALQKCGFTPKFRDFTVQNIIGSANVGFNIRLEGLANKYVTVGA 148
Query: 122 TYEPELFPGLIYRM---------KKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
++ PE+FPGL ++ + T+LIF +GK+V+TGAK E AAF +YP+
Sbjct: 149 SFVPEIFPGLSFKQYLGYRADGTPRSCPTLLIFTTGKIVVTGAKTEEDFRAAFARVYPLF 208
>gi|440294161|gb|ELP87178.1| TATA-box-binding protein, putative [Entamoeba invadens IP1]
Length = 233
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/171 (54%), Positives = 126/171 (73%), Gaps = 1/171 (0%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P I N+V+T L +LDL+KI ARNAEYNP RF+ MRI PK+TALIF +GKIVCT
Sbjct: 52 PEIVNVVSTFQLNQQLDLRKIVQKARNAEYNPKRFAGAIMRISSPKSTALIFQTGKIVCT 111
Query: 63 GAKSESQAKLAARKYARIVQKIGF-PVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFS 121
G +S ++K+AA+KYA+I++KIG+ V+F +F +QNIVGSCDV+F I L L +
Sbjct: 112 GTRSIEESKIAAKKYAKIIKKIGYNEVRFSNFNVQNIVGSCDVKFQISLRSLYDSNTDMC 171
Query: 122 TYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPE+FPGL++RM +P VT+L+F +GKVV+TGAK E + A+ IYP+L
Sbjct: 172 QYEPEVFPGLVFRMTQPKVTLLVFSTGKVVLTGAKDDESLNTAYTKIYPIL 222
>gi|440298942|gb|ELP91557.1| TATA-box-binding protein, putative [Entamoeba invadens IP1]
Length = 233
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 94/171 (54%), Positives = 126/171 (73%), Gaps = 1/171 (0%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P I N+V+T L +LDL+KI ARNAEYNP RF+ MRI PK+TALIF +GKIVCT
Sbjct: 52 PEIVNVVSTFQLNQQLDLRKIVQKARNAEYNPKRFAGAIMRISSPKSTALIFQTGKIVCT 111
Query: 63 GAKSESQAKLAARKYARIVQKIGF-PVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFS 121
G +S ++K+AA+KYA+I++KIG+ V+F +F +QNIVGSCDV+F I L L +
Sbjct: 112 GTRSIEESKIAAKKYAKIIKKIGYNEVRFSNFNVQNIVGSCDVKFQISLRSLYDSNTDMC 171
Query: 122 TYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPE+FPGL++RM +P VT+L+F +GKVV+TGAK E + A+ IYP+L
Sbjct: 172 QYEPEVFPGLVFRMTQPKVTLLVFSTGKVVLTGAKDDESLNTAYTKIYPIL 222
>gi|328705141|ref|XP_001943046.2| PREDICTED: TATA box-binding protein-like protein 2-like
[Acyrthosiphon pisum]
Length = 343
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 113/171 (66%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
+QNIV N+ C LDL +I + N+EYNP RF+ + MR++ P T+L+F SGK++ GA
Sbjct: 170 VQNIVCGANMGCPLDLVRIVMWTSNSEYNPQRFNGLIMRLRTPNVTSLLFPSGKMIMQGA 229
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYE 124
K + L RK A+I++++G VQF D+ + NIV + DV FPI LE LN H+ F+++E
Sbjct: 230 KDDRTGNLGCRKVAKILERLGHNVQFCDYTVHNIVCTWDVGFPIMLEELNTAHSQFTSFE 289
Query: 125 PELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
PE+FP LIYRM KP L+F++GKVV+TG K + I + + VLN +
Sbjct: 290 PEVFPALIYRMVKPRAVFLMFVNGKVVLTGLKTKADIKESVFLMQDVLNNF 340
>gi|242247621|ref|NP_001156189.1| TATA-box-binding protein-like [Acyrthosiphon pisum]
gi|239791994|dbj|BAH72388.1| ACYPI005546 [Acyrthosiphon pisum]
Length = 331
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 113/171 (66%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
+QNIV N+ C LDL +I + N+EYNP RF+ + MR++ P T+L+F SGK++ GA
Sbjct: 158 VQNIVCGANMGCPLDLVRIVMWTSNSEYNPLRFNGLIMRLRTPNVTSLLFPSGKMIMQGA 217
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYE 124
K + L RK A+I++++G V+F D+ + NIV + DV FPI LE LN H+ F+++E
Sbjct: 218 KDDRTGNLGCRKVAKILERLGHNVKFSDYTVHNIVCTWDVGFPIMLEELNTAHSQFTSFE 277
Query: 125 PELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
PE+FP LIYRM KP L+F++GKVV+TG K + I + + VLN +
Sbjct: 278 PEVFPALIYRMVKPRAVFLMFVNGKVVLTGLKTKSDIKESVFLMQDVLNSF 328
>gi|298710178|emb|CBJ26253.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 358
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/180 (47%), Positives = 119/180 (66%), Gaps = 14/180 (7%)
Query: 7 NIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRI---KEPKTTALIFSSGKIVCTG 63
N+ AT +++C +DLK + + ARNAEYNP RFSA +R+ EPK TAL+F +GK+V TG
Sbjct: 137 NVTATADMKCTIDLKTVVMRARNAEYNPKRFSACIIRLINKNEPKATALVFKTGKVVVTG 196
Query: 64 AKSESQAKLAARKYARIVQKI----GFP---VQF---KDFKIQNIVGSCDVEFPIKLERL 113
++S + A + +ARI+ K+ G P + F +D ++QN+V + DV FPI+LE L
Sbjct: 197 SRSNASVDYACKTFARILSKLDNGSGGPSHKINFDLERDRRVQNMVATTDVGFPIRLEGL 256
Query: 114 -NGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
F YEPELFPGLIYRMK P + LIF+SGKVV+TGAK+ +Q+ F +YP L
Sbjct: 257 VASNQGCFCNYEPELFPGLIYRMKDPKICFLIFVSGKVVLTGAKSAQQLEDGFKKMYPTL 316
>gi|326432022|gb|EGD77592.1| TATA-box-binding protein [Salpingoeca sp. ATCC 50818]
Length = 271
Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 97/230 (42%), Positives = 133/230 (57%), Gaps = 57/230 (24%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEP--------------- 47
P I N+VAT+NL LDLK IA+HARNA+Y P+RFSA+ MRI++
Sbjct: 40 PEIVNVVATVNLGLTLDLKYIAMHARNAQYTPNRFSAMVMRIRDEEKQNTSHIASRRRTG 99
Query: 48 ---KTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKI-------------------- 84
K TAL+F++GK++CTG K +A+ AA+K+A+I++KI
Sbjct: 100 RPMKATALVFATGKLICTGTKGPEEARAAAKKFAKIIRKILHLERAEKAAAREAATAMLT 159
Query: 85 -------------------GFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEP 125
V+F FK+QN+V CD FPI+LE L + +FSTYEP
Sbjct: 160 EHGGQRDHDDEEEEGEQEEAARVRFDGFKVQNMVAKCDCRFPIRLEALQAHYPVFSTYEP 219
Query: 126 ELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
ELFPGL++RM +P +L F+SGK+VITGAK+REQI AF+NI +L +
Sbjct: 220 ELFPGLVFRMAEPRCVVLCFVSGKLVITGAKSREQIQEAFDNICDMLKPF 269
>gi|195964300|gb|ACG60161.1| TATA binding protein [Notothenia coriiceps]
Length = 171
Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 77/99 (77%), Positives = 90/99 (90%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 73 PQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 132
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGS 101
GAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGS
Sbjct: 133 GAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGS 171
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 94 KIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVIT 153
++QNIV + ++ + L+ + A + Y P+ F +I R+++P T LIF SGK+V T
Sbjct: 74 QLQNIVSTVNLGCKLDLKTI-ALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 132
Query: 154 GAKAREQ 160
GAK+ EQ
Sbjct: 133 GAKSEEQ 139
>gi|156083957|ref|XP_001609462.1| TATA-box binding protein [Babesia bovis T2Bo]
gi|154796713|gb|EDO05894.1| TATA-box binding protein [Babesia bovis]
Length = 277
Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 124/174 (71%), Gaps = 4/174 (2%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
PV+QNIVA+++L ++DL++IA+ RNAEYNP +F+A+ +R++ P+ T L+F +G+++ T
Sbjct: 99 PVVQNIVASVHLGNEIDLREIAISTRNAEYNPRKFNALILRMQNPRCTGLVFRTGRLIVT 158
Query: 63 GAKSESQAKLAARKYARIVQK-IGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFS 121
G K+ A+L A++ A++V++ +G +QF DFKI+NI+ + + PI+LERL H +F
Sbjct: 159 GCKTVESARLGAKRIAKMVRRELGGGIQFNDFKIENIIATFNCNVPIRLERLYEEHKLFC 218
Query: 122 TYEPELFPGLIYRMKKP---NVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPE+F GL+YR+ P +L+F+SG V++TG ++ E IY + + P+L
Sbjct: 219 NYEPEIFAGLVYRIAIPCKSEAVLLVFVSGNVIVTGCRSPEDIYLIYRRMAPIL 272
>gi|291191925|gb|ADD83026.1| TATA box binding protein [Gobiocypris rarus]
Length = 224
Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 76/98 (77%), Positives = 89/98 (90%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 127 PQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 186
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVG 100
GAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VG
Sbjct: 187 GAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVG 224
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 94 KIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVIT 153
++QNIV + ++ + L+ + A + Y P+ F +I R+++P T LIF SGK+V T
Sbjct: 128 QLQNIVSTVNLGCKLDLKTI-ALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 186
Query: 154 GAKAREQ 160
GAK+ EQ
Sbjct: 187 GAKSEEQ 193
>gi|195964298|gb|ACG60160.1| TATA binding protein [Chaenocephalus aceratus]
Length = 173
Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 77/99 (77%), Positives = 89/99 (89%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 75 PQLQNIVPTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 134
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGS 101
GAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGS
Sbjct: 135 GAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGS 173
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 94 KIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVIT 153
++QNIV + ++ + L+ + A + Y P+ F +I R+++P T LIF SGK+V T
Sbjct: 76 QLQNIVPTVNLGCKLDLKTI-ALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 134
Query: 154 GAKAREQ 160
GAK+ EQ
Sbjct: 135 GAKSEEQ 141
>gi|301113196|ref|XP_002998368.1| TATA-box-binding protein [Phytophthora infestans T30-4]
gi|262111669|gb|EEY69721.1| TATA-box-binding protein [Phytophthora infestans T30-4]
Length = 220
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/159 (52%), Positives = 107/159 (67%)
Query: 17 KLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARK 76
++D+KK+AL RNA+Y P FSA+ MR + P+ T L++ SGK V GA S + AKLAA K
Sbjct: 39 RVDIKKLALLVRNADYAPRGFSALVMRFQAPRATVLLYRSGKFVVIGATSVADAKLAAEK 98
Query: 77 YARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMK 136
I++K+ FP F I+N+VGS DV F ++LE L H FSTYEPELFPGLIYRM
Sbjct: 99 LVSILKKVSFPSDNSPFTIRNVVGSADVCFRVRLEGLARDHLRFSTYEPELFPGLIYRML 158
Query: 137 KPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
+P T+LIF+SGK+VITG ++ A IYPVL Y
Sbjct: 159 RPKCTLLIFISGKLVITGCESSADGERALGAIYPVLLQY 197
>gi|195964302|gb|ACG60162.1| TATA binding protein [Chionodraco rastrospinosus]
Length = 173
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 76/99 (76%), Positives = 89/99 (89%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VC
Sbjct: 75 PQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCA 134
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGS 101
GAKSE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGS
Sbjct: 135 GAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGS 173
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 94 KIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVIT 153
++QNIV + ++ + L+ + A + Y P+ F +I R+++P T LIF SGK+V
Sbjct: 76 QLQNIVSTVNLGCKLDLKTI-ALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCA 134
Query: 154 GAKAREQ 160
GAK+ EQ
Sbjct: 135 GAKSEEQ 141
>gi|444728636|gb|ELW69085.1| TATA-box-binding protein [Tupaia chinensis]
Length = 313
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 75/109 (68%), Positives = 91/109 (83%)
Query: 67 ESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPE 126
E Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L H FS+YEPE
Sbjct: 201 EEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPE 260
Query: 127 LFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
LFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L +
Sbjct: 261 LFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 309
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 5 IQNIVATINLECKLDLKKIAL-HARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
IQN+V + +++ + L+ + L H + + Y P F + R+ +P+ LIF SGK+V TG
Sbjct: 229 IQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTG 288
Query: 64 AK 65
AK
Sbjct: 289 AK 290
>gi|428671167|gb|EKX72085.1| transcription factor TFIID or TATA-binding protein, TBP, putative
[Babesia equi]
Length = 304
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 124/178 (69%), Gaps = 5/178 (2%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
PV+QNIVA+++L +LDL++IA+ RNAEYNP +F+A+ +R+ PK T LIF +G+I+ T
Sbjct: 125 PVVQNIVASVHLGRELDLREIAISTRNAEYNPKKFNALVLRMHNPKCTGLIFRTGRIIIT 184
Query: 63 GAKSESQAKLAARKYARIVQKI--GFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
G+++ A+L A++ A+I++++ G F++FKI+NI+ + + PI+LE L+ H
Sbjct: 185 GSRTTEAARLGAKRMAKIIRRVLGGDDFAFRNFKIENIIATFNCNVPIRLEVLSSEHEDL 244
Query: 121 STYEPELFPGLIYRMKKPNVT---MLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPE F GL++R + + +LIF+SG V+ITG K+ E+++ FN ++P+L Y
Sbjct: 245 CNYEPEFFAGLVFRFSLTDTSEAVLLIFVSGNVIITGCKSMEEVHHVFNTMHPILLRY 302
>gi|195114322|ref|XP_002001716.1| GI15474 [Drosophila mojavensis]
gi|193912291|gb|EDW11158.1| GI15474 [Drosophila mojavensis]
Length = 442
Score = 165 bits (418), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 117/174 (67%), Gaps = 2/174 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
VI N+V + ++ C L L++IALH N EY VTMR++ P TTA I+SSG+I CTG
Sbjct: 92 VINNVVCSFSVRCHLKLREIALHGSNVEYR-RENGMVTMRLRRPYTTASIWSSGRITCTG 150
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SESQAK+AAR+YAR + K+GFPV+F+ F+I N++G+C + +PI++ + H + Y
Sbjct: 151 AISESQAKVAARRYARSLSKLGFPVRFQQFRIVNVLGTCSMPWPIRIVNFSERHRESACY 210
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVT 177
EPEL PG+ ++M+ P T+ IF +G + +T A + +A +YP+++ + T
Sbjct: 211 EPELHPGVTFKMQDPKATLKIFSTGSITVTAASV-NAVESAIQRLYPLVHEFRT 263
>gi|410989830|ref|XP_004001158.1| PREDICTED: TATA box-binding protein-like protein 2-like [Felis
catus]
Length = 135
Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 75/107 (70%), Positives = 89/107 (83%)
Query: 67 ESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPE 126
E Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV FPI+LE L H FS+YEPE
Sbjct: 24 EEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQFSSYEPE 83
Query: 127 LFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
LFPGLIYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L
Sbjct: 84 LFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPILK 130
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 5 IQNIVATINLECKLDLKKIAL-HARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
IQN+V + ++ + L+ + L H + + Y P F + R+ +P+ LIF SGK+V TG
Sbjct: 52 IQNMVGSCDVRFPIRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTG 111
Query: 64 AKSESQ 69
AK S+
Sbjct: 112 AKERSE 117
>gi|348669793|gb|EGZ09615.1| hypothetical protein PHYSODRAFT_522103 [Phytophthora sojae]
Length = 216
Score = 165 bits (417), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 81/159 (50%), Positives = 107/159 (67%)
Query: 17 KLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARK 76
K++++K+AL RNA+Y P FSA+ MR +EP+ T L++ SGK V GA S +KLAA K
Sbjct: 42 KVNIEKLALLVRNADYAPRSFSALVMRFQEPRATVLVYRSGKFVVIGATSVDDSKLAADK 101
Query: 77 YARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMK 136
I +K+ FP F ++N+VGS DV F I+LE L H FSTYEPE+FPGLIYRM
Sbjct: 102 LVSIFKKVSFPSDCSPFTVRNVVGSSDVGFRIRLEGLARDHLRFSTYEPEMFPGLIYRML 161
Query: 137 KPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
+P T+LIF+SGK+VITG ++ Q A I+PVL Y
Sbjct: 162 RPKCTLLIFISGKIVITGCESPAQGEKALGKIFPVLLQY 200
>gi|403220982|dbj|BAM39115.1| transcription initiation factor [Theileria orientalis strain
Shintoku]
Length = 276
Score = 165 bits (417), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 121/177 (68%), Gaps = 4/177 (2%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P++QNIVA+++L +LDL++IA+ RNAEYNP +F+A+ +R++ PK T LIF +G+I+ T
Sbjct: 98 PMVQNIVASVHLGQELDLREIAISTRNAEYNPKKFNALVLRMQNPKCTGLIFRTGRIIIT 157
Query: 63 GAKSESQAKLAARKYARIVQK-IGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFS 121
G+K+ KL A++ A++++K +G ++F +FKI+NI+ + + PI+LE + H S
Sbjct: 158 GSKTIEDTKLGAKRMAKMIRKELGADLKFNNFKIENIIATFNCNVPIRLEVFSQEHKELS 217
Query: 122 TYEPELFPGLIYRMK---KPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPE F GL+YR + +LIF+SG V+ITG K+ +I F +YP+L Y
Sbjct: 218 NYEPEFFAGLVYRCRISESSEAVLLIFVSGNVIITGCKSAHEIQYVFKTMYPILQQY 274
>gi|195386532|ref|XP_002051958.1| GJ17285 [Drosophila virilis]
gi|194148415|gb|EDW64113.1| GJ17285 [Drosophila virilis]
Length = 387
Score = 165 bits (417), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 117/174 (67%), Gaps = 2/174 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
VI N+V + ++ C L L++IALH N EY VTMR++ P TTA I+SSG+I CTG
Sbjct: 53 VINNVVCSFSVRCHLKLREIALHGSNVEYR-RENGMVTMRLRRPYTTASIWSSGRITCTG 111
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE QAK+AAR+YAR + K+GFPV F++F+I N++G+C + + I++ + + H ++Y
Sbjct: 112 AISEPQAKVAARRYARSLGKLGFPVHFQNFRIVNVLGTCSMPWSIRIVKFSERHRDNASY 171
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVT 177
EPEL PG+ Y+M+ P TM IF +G + +T A + +A +YP+++ + T
Sbjct: 172 EPELHPGVTYKMRDPKATMKIFSTGSITVTAASV-NAVESAIQRLYPLVHEFRT 224
>gi|123507489|ref|XP_001329427.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121912382|gb|EAY17204.1| hypothetical protein TVAG_291560 [Trichomonas vaginalis G3]
Length = 235
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/180 (46%), Positives = 118/180 (65%), Gaps = 3/180 (1%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P + NIVA ++ CKLDL KI RN+EYNP RF A T+R KEPK TAL F +GK+
Sbjct: 52 PKVVNIVACVDYGCKLDLLKITSSTRNSEYNPIRFPAATLRNKEPKATALAFKNGKVNIV 111
Query: 63 GAKSESQAKLAARKYARIVQKIGF-PVQFKDFKIQNIVGSCDVEFPIKLERL--NGFHAM 119
G KS A AAR + R+ + IG V+ K F I N+V + D +FPI LE + + H
Sbjct: 112 GCKSADIALKAARCFGRLFKNIGIKDVKIKSFSIANMVATMDCKFPIHLESIASSPGHIK 171
Query: 120 FSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYD 179
F+TY PE++ GLIYR+ P T++I++SGK++ITGAK+ E++ AA IYP+L ++ + +
Sbjct: 172 FATYNPEIYAGLIYRLASPKTTLMIYVSGKIIITGAKSEEELKAASAFIYPILRLFASTE 231
>gi|294939318|ref|XP_002782410.1| TATA-binding protein, putative [Perkinsus marinus ATCC 50983]
gi|239894016|gb|EER14205.1| TATA-binding protein, putative [Perkinsus marinus ATCC 50983]
Length = 273
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/191 (46%), Positives = 129/191 (67%), Gaps = 21/191 (10%)
Query: 3 PVIQNIVATINL-------------------ECKLDLKKIALHARNAEYNPSRFSAVTMR 43
PV++N++A++ L +DLKK+A ARNAEYNP + +AV +R
Sbjct: 78 PVLENVIASVELGIINSTHSTTTTGGSSSSSSHLIDLKKVAFKARNAEYNPRKVNAVVIR 137
Query: 44 IKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIG-FP-VQFKDFKIQNIVGS 101
++PK TA+++ +GK++ TG+ SE AK AA+K A+IV K G +P +F+ FKI+N+V S
Sbjct: 138 FRDPKATAMLYGTGKVMVTGSNSEETAKDAAKKVAKIVIKSGAYPQARFRRFKIENMVAS 197
Query: 102 CDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQI 161
DV FPI+LE L H + +YEPEL+PGL++R+ +P V +LIF+SGK+V TGAK R+ I
Sbjct: 198 ADVRFPIRLEALAYEHRSYCSYEPELYPGLVFRLFEPKVALLIFVSGKIVFTGAKNRDDI 257
Query: 162 YAAFNNIYPVL 172
AF NIYP+L
Sbjct: 258 TNAFRNIYPLL 268
>gi|326431087|gb|EGD76657.1| TATA box binding protein [Salpingoeca sp. ATCC 50818]
Length = 166
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/156 (53%), Positives = 113/156 (72%), Gaps = 1/156 (0%)
Query: 2 APVIQNIVATINL-ECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+P I NIVAT +L +L L++IA A+N+EYNP R+SA+ MRIKEP TALIFS+GK+V
Sbjct: 11 SPNIVNIVATAHLSRTQLKLEEIAEKAKNSEYNPKRYSAIIMRIKEPSATALIFSTGKVV 70
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
GAKSE A AAR++A+ + K G V ++ KI N+VG D+ F + L+ L+ H +
Sbjct: 71 IMGAKSEEAAHAAARQFAQNITKAGTRVSLREIKIHNVVGRVDIGFKLHLDNLHVEHPAW 130
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAK 156
STY+PE FPGL YRM++P+V +LIF SGK+V+T AK
Sbjct: 131 STYDPESFPGLTYRMQEPDVVLLIFHSGKIVLTKAK 166
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 95 IQNIVGSCDV-EFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVIT 153
I NIV + + +KLE + A S Y P+ + +I R+K+P+ T LIF +GKVVI
Sbjct: 14 IVNIVATAHLSRTQLKLEEI-AEKAKNSEYNPKRYSAIIMRIKEPSATALIFSTGKVVIM 72
Query: 154 GAKARE 159
GAK+ E
Sbjct: 73 GAKSEE 78
>gi|195393646|ref|XP_002055464.1| GJ19385 [Drosophila virilis]
gi|194149974|gb|EDW65665.1| GJ19385 [Drosophila virilis]
Length = 711
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 74/172 (43%), Positives = 118/172 (68%), Gaps = 2/172 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
VI N+V + ++ C L L++IAL+ N EY VTM+++ P TTA I+SSG+I CTG
Sbjct: 281 VINNVVCSFSVRCHLKLREIALNGSNVEYRREN-GMVTMKLRRPYTTASIWSSGRITCTG 339
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SESQAK+AAR+YAR + K+GFP F++F+I N++G+C + + IK+ + H ++Y
Sbjct: 340 ATSESQAKIAARRYARCLSKLGFPTHFQNFRIVNVLGTCSMPWAIKIVNFSERHRDNASY 399
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
EPEL PG+ Y+M++P T+ IF +G + +T A + + +A +IYP+++ +
Sbjct: 400 EPELHPGVTYKMREPKATLKIFSTGSITVTAASVND-VESAIQHIYPLVHEF 450
>gi|294939316|ref|XP_002782409.1| TATA-binding protein, putative [Perkinsus marinus ATCC 50983]
gi|239894015|gb|EER14204.1| TATA-binding protein, putative [Perkinsus marinus ATCC 50983]
Length = 302
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/191 (46%), Positives = 129/191 (67%), Gaps = 21/191 (10%)
Query: 3 PVIQNIVATINL-------------------ECKLDLKKIALHARNAEYNPSRFSAVTMR 43
PV++N++A++ L +DLKK+A ARNAEYNP + +AV +R
Sbjct: 107 PVLENVIASVELGIINSTHSTTTTGGSSSSSSHLIDLKKVAFKARNAEYNPRKVNAVVIR 166
Query: 44 IKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIG-FP-VQFKDFKIQNIVGS 101
++PK TA+++ +GK++ TG+ SE AK AA+K A+IV K G +P +F+ FKI+N+V S
Sbjct: 167 FRDPKATAMLYGTGKVMVTGSNSEETAKDAAKKVAKIVIKSGAYPQARFRRFKIENMVAS 226
Query: 102 CDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQI 161
DV FPI+LE L H + +YEPEL+PGL++R+ +P V +LIF+SGK+V TGAK R+ I
Sbjct: 227 ADVRFPIRLEALAYEHRSYCSYEPELYPGLVFRLFEPKVALLIFVSGKIVFTGAKNRDDI 286
Query: 162 YAAFNNIYPVL 172
AF NIYP+L
Sbjct: 287 TNAFRNIYPLL 297
>gi|8777987|gb|AAF79170.1| TATA-box binding protein [Brachionus plicatilis]
Length = 109
Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 76/109 (69%), Positives = 92/109 (84%)
Query: 14 LECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLA 73
L C L+LKKIAL+ARNAEYNP RF+AV MRI+ P+TTALIFSSGK+VCTGAKSE ++LA
Sbjct: 1 LGCNLELKKIALYARNAEYNPKRFAAVIMRIRSPRTTALIFSSGKMVCTGAKSEEDSRLA 60
Query: 74 ARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
ARKYARI+QK+GFP +F DFKIQNIVGS DV F ++LE + H+ FS+
Sbjct: 61 ARKYARIIQKLGFPAKFMDFKIQNIVGSIDVGFCLRLECFHTCHSQFSS 109
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 115 GFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQ 160
+A + Y P+ F +I R++ P T LIF SGK+V TGAK+ E
Sbjct: 11 ALYARNAEYNPKRFAAVIMRIRSPRTTALIFSSGKMVCTGAKSEED 56
>gi|195134909|ref|XP_002011879.1| GI14331 [Drosophila mojavensis]
gi|193909133|gb|EDW08000.1| GI14331 [Drosophila mojavensis]
Length = 656
Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats.
Identities = 74/172 (43%), Positives = 118/172 (68%), Gaps = 2/172 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
VI N+V + ++ C L L++IAL+ N EY VTM+++ P TTA I+SSG+I CTG
Sbjct: 264 VINNVVCSFSVRCHLKLREIALNGSNVEYRREN-GMVTMKLRRPYTTASIWSSGRITCTG 322
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SESQAK+AAR+YAR + K+GFP F++F+I N++G+C + + IK+ + H ++Y
Sbjct: 323 ATSESQAKIAARRYARCLSKLGFPTHFQNFRIVNVLGTCSMPWAIKIVNFSERHRDNASY 382
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
EPEL PG+ Y+M++P T+ IF +G + +T A + + +A +IYP+++ +
Sbjct: 383 EPELHPGVTYKMREPKATLKIFSTGSITVTAASVND-VESAIQHIYPLVHEF 433
>gi|195035138|ref|XP_001989048.1| GH10255 [Drosophila grimshawi]
gi|193905048|gb|EDW03915.1| GH10255 [Drosophila grimshawi]
Length = 314
Score = 162 bits (409), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 74/172 (43%), Positives = 115/172 (66%), Gaps = 2/172 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
VI N+V + ++ C L+L+ IAL N EY +TMR++ P TTA I+SSG+I CTG
Sbjct: 25 VITNVVCSFSVRCHLNLQNIALKGSNVEYRREN-GMLTMRLRRPYTTASIWSSGRITCTG 83
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE QAK+AAR+YARI++ +GFPV+F+ F++ N++ +C + +PIK+ + + ++Y
Sbjct: 84 AISEMQAKVAARRYARILEHLGFPVRFQSFRVVNVLATCCMPWPIKIVNFSMHNREMASY 143
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
EPEL+PG+ YRM+ P T+ IF +G + +T A + A IYP++N +
Sbjct: 144 EPELYPGVTYRMRNPKATLRIFSTGNITVTAASV-NAVETAVQRIYPLVNEF 194
>gi|84998870|ref|XP_954156.1| transcription initiation factor (TBP ) [Theileria annulata]
gi|65305154|emb|CAI73479.1| transcription initiation factor (TBP homologue), putative
[Theileria annulata]
Length = 222
Score = 161 bits (408), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 121/177 (68%), Gaps = 4/177 (2%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
PV+QNIVA+++L +LDL++IA+ RNAEYNP +F+A+ +R++ PK T LIF +G+I+ T
Sbjct: 44 PVVQNIVASVHLGEELDLREIAISTRNAEYNPRKFNALVLRMQNPKCTGLIFRTGRIIIT 103
Query: 63 GAKSESQAKLAARKYARIVQK-IGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFS 121
G+K+ AKL ++ A++++K G ++F +FKI+NI+ + PI+LE + H
Sbjct: 104 GSKTIEDAKLGGKRMAKMIRKETGLDLKFNNFKIENIIATFSCNVPIRLEVFSQEHKDLC 163
Query: 122 TYEPELFPGLIYRMK---KPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPE F GL+YR + + +LIF+SG V+ITG K+ ++I F +YP+L+ Y
Sbjct: 164 NYEPEFFAGLVYRCRINEESEAVLLIFVSGNVIITGCKSPQEIQYVFKIMYPILHQY 220
>gi|7960166|gb|AAF71245.1| TA-TA binding protein 1 [Gallus gallus]
gi|7960168|gb|AAF71246.1| TA-TA binding protein 1 [Gallus gallus]
Length = 210
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/95 (76%), Positives = 85/95 (89%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 114 PQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 173
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQN 97
GAKSE Q++LAARKYAR+VQK+GFP +F DFKIQ
Sbjct: 174 GAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQT 208
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 94 KIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVIT 153
++QNIV + ++ + L+ + A + Y P+ F +I R+++P T LIF SGK+V T
Sbjct: 115 QLQNIVSTVNLGCKLDLKTI-ALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 173
Query: 154 GAKAREQ 160
GAK+ EQ
Sbjct: 174 GAKSEEQ 180
>gi|374719192|gb|AEZ67282.1| TBP, partial [Eidolon helvum]
gi|374719194|gb|AEZ67283.1| TBP, partial [Myotis daubentonii]
gi|374719196|gb|AEZ67284.1| TBP, partial [Pipistrellus sp. DR-2011]
Length = 96
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/94 (78%), Positives = 86/94 (91%)
Query: 20 LKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYAR 79
LK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCTGAKSE Q++LAARKYAR
Sbjct: 1 LKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYAR 60
Query: 80 IVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERL 113
+VQK+GFP +F DFKIQN+VGSCDV+FPI+LE L
Sbjct: 61 VVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGL 94
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 115 GFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQ 160
A + Y P+ F +I R+++P T LIF SGK+V TGAK+ EQ
Sbjct: 5 ALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQ 50
>gi|325185920|emb|CCA20424.1| TATAboxbinding protein putative [Albugo laibachii Nc14]
Length = 203
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/170 (47%), Positives = 116/170 (68%), Gaps = 3/170 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHA-RNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
I+N+V + NL + DL + + + + AE P + + + M+I P TTA++FS+GK+V TG
Sbjct: 11 IKNVVCSANLGMRFDLTDLLIKSQKRAELVPKK-NCILMKIPSPDTTAMLFSNGKLVVTG 69
Query: 64 AKSESQAKLAARKYARIVQKIGFP-VQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
A SE Q K AARK+ +I+QK+ +P V DFKI+NI+G+CDV F I +E+ HA
Sbjct: 70 ANSEDQVKTAARKFTQIIQKMDYPGVNLIDFKIRNIIGNCDVGFRILMEKFAAAHASRCI 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPEL+P LIYR+ P+V +L+F+SGKVV TG+K ++AA IYP+L
Sbjct: 130 YEPELYPALIYRLAHPSVKILVFVSGKVVFTGSKDPRDLHAACEQIYPLL 179
>gi|71033019|ref|XP_766151.1| transcription initiation factor TFIID [Theileria parva strain
Muguga]
gi|68353108|gb|EAN33868.1| transcription initiation factor TFIID, putative [Theileria parva]
Length = 222
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 120/177 (67%), Gaps = 4/177 (2%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P++QNIVA+++L +LDL++IA+ RNAEYNP +F+A+ +R++ PK T LIF +G+I+ T
Sbjct: 44 PMVQNIVASVHLGEELDLREIAISTRNAEYNPKKFNALVLRMQNPKCTGLIFRTGRIIIT 103
Query: 63 GAKSESQAKLAARKYARIVQK-IGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFS 121
G+K+ +L ++ A++++K G ++F +FKI+NI+ + PI+LE + H
Sbjct: 104 GSKTIEDTRLGGKRMAKMIRKETGLDLKFNNFKIENIIATFSCNVPIRLEVFSQEHKDLC 163
Query: 122 TYEPELFPGLIYRMK---KPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPE F GL+YR + + +LIF+SG V+ITG K+ ++I F +YP+L+ Y
Sbjct: 164 NYEPEFFAGLVYRCRINEESEAVLLIFVSGNVIITGCKSAQEIQYVFKTMYPILHQY 220
>gi|195438615|ref|XP_002067228.1| GK16294 [Drosophila willistoni]
gi|194163313|gb|EDW78214.1| GK16294 [Drosophila willistoni]
Length = 1222
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 74/168 (44%), Positives = 114/168 (67%), Gaps = 2/168 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
VI N+V + ++ C L L++IALH N EY VTM+++ P TTA I+SSG+I CTG
Sbjct: 733 VINNVVCSFSVRCHLKLREIALHGANVEYR-RENGMVTMKLRHPYTTASIWSSGRITCTG 791
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE AK+AAR+YAR + K+GFP +F++F+I N++G+C + + IK+ + H ++Y
Sbjct: 792 ATSEIMAKVAARRYARCLGKLGFPTRFQNFRIVNVLGTCSMPWAIKIVNFSERHRDNASY 851
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPV 171
EPEL PG+ Y+M++P T+ IF +G + +T A + + AA +IYP+
Sbjct: 852 EPELHPGVTYKMREPKATLKIFSTGSITVTAASVND-VEAAIQHIYPL 898
>gi|242015292|ref|XP_002428298.1| trf2 protein, putative [Pediculus humanus corporis]
gi|212512883|gb|EEB15560.1| trf2 protein, putative [Pediculus humanus corporis]
Length = 289
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/169 (44%), Positives = 113/169 (66%), Gaps = 2/169 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
VI N+V + ++ C L+LK+IA H N EY VTM++++P TTA I+SSGKI CTG
Sbjct: 53 VINNVVCSFSVRCHLNLKEIATHGANVEYRKEN-GMVTMKLRKPYTTASIWSSGKITCTG 111
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE AK+AAR++AR +QK+GF V+F +F++ N++G+C + F IK+ + + + Y
Sbjct: 112 ATSEDNAKIAARRFARSLQKLGFEVRFNNFRVVNVLGTCSMPFGIKINSFSAKYPKQAEY 171
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPE+ PG+ YR+K P T+ IF +G + +T A I AA +IYP++
Sbjct: 172 EPEIHPGVTYRLKDPKATLKIFSTGSITVT-APCVSSIAAAIEHIYPLV 219
>gi|300120388|emb|CBK19942.2| unnamed protein product [Blastocystis hominis]
Length = 199
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/169 (47%), Positives = 110/169 (65%), Gaps = 2/169 (1%)
Query: 6 QNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAK 65
NIV+T+N++ +++L ++ RN EYNP RF A+ MRI+EPK TAL+F SGK+V G K
Sbjct: 25 SNIVSTVNMKKEINLPEVVDKLRNTEYNPKRFDAMIMRIREPKCTALVFKSGKVVLAGTK 84
Query: 66 SESQAKLAARKYARIVQKIGFPVQFKDFK--IQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
S + A R+ I+ + + D K I N+V D +FPI+LE L+ + +TY
Sbjct: 85 STKDTEAAGRRVVDILSRFTGGNKSDDTKPIIHNMVAVGDFKFPIRLEGLSIEYLESTTY 144
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPELF GLIYRMK P+V +LIF+SGKVV+TGAK I AF I P++
Sbjct: 145 EPELFSGLIYRMKNPDVVLLIFVSGKVVVTGAKDESDIRQAFRKISPLI 193
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
+ Y P+ F +I R+++P T L+F SGKVV+ G K+ + AA + +L+ +
Sbjct: 49 TEYNPKRFDAMIMRIREPKCTALVFKSGKVVLAGTKSTKDTEAAGRRVVDILSRF 103
>gi|8777977|gb|AAF79165.1|AF249988_1 TATA-box binding protein 1 [Philodina roseola]
Length = 108
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/107 (68%), Positives = 89/107 (83%)
Query: 14 LECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLA 73
L C LDLK+IAL ARNAEYNP RF+AV MRI+ P+TTALIF SGK+VCTGAKSE+ + A
Sbjct: 1 LGCPLDLKRIALQARNAEYNPKRFAAVIMRIRSPRTTALIFGSGKMVCTGAKSENDSLQA 60
Query: 74 ARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
AR+YAR++QK+GFP +F+DFKIQN+VGS DV+FPI+LE L H F
Sbjct: 61 ARRYARVIQKLGFPAKFRDFKIQNMVGSVDVKFPIRLEALVLKHYQF 107
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 107 PIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKA 157
P+ L+R+ A + Y P+ F +I R++ P T LIF SGK+V TGAK+
Sbjct: 4 PLDLKRI-ALQARNAEYNPKRFAAVIMRIRSPRTTALIFGSGKMVCTGAKS 53
>gi|8777979|gb|AAF79166.1| TATA-box binding protein 2 [Macrotrachela quadricornifera]
gi|8777981|gb|AAF79167.1| TATA-box binding protein 2 [Philodina roseola]
Length = 108
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/107 (68%), Positives = 89/107 (83%)
Query: 14 LECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLA 73
L C LDLK+IAL ARNAEYNP RF+AV MRI+ P+TTALIF SGK+VCTGAKSE+ + A
Sbjct: 1 LGCPLDLKRIALQARNAEYNPKRFAAVIMRIRSPRTTALIFGSGKMVCTGAKSENXSLQA 60
Query: 74 ARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
AR+YAR++QK+GFP +F+DFKIQN+VGS DV+FPI+LE L H F
Sbjct: 61 ARRYARVIQKLGFPAKFRDFKIQNMVGSVDVKFPIRLEALVLKHYQF 107
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 107 PIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKA 157
P+ L+R+ A + Y P+ F +I R++ P T LIF SGK+V TGAK+
Sbjct: 4 PLDLKRI-ALQARNAEYNPKRFAAVIMRIRSPRTTALIFGSGKMVCTGAKS 53
>gi|8777985|gb|AAF79169.1| TATA-box binding protein 2 [Habrotrocha constricta]
Length = 108
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/107 (68%), Positives = 88/107 (82%)
Query: 14 LECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLA 73
L C+LDLK+IAL ARNAEYNP RF+AV MRI+ P+TTALIFSSGK+VCTGAKSE + A
Sbjct: 1 LGCQLDLKRIALQARNAEYNPKRFAAVIMRIRSPRTTALIFSSGKMVCTGAKSEEDSIQA 60
Query: 74 ARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
AR+YAR++QK+GFP +F DFKIQN+VGS DV F I+LE L HA +
Sbjct: 61 ARRYARVIQKLGFPAKFLDFKIQNMVGSADVSFKIQLEALALKHATY 107
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 108 IKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKARE 159
+ L+R+ A + Y P+ F +I R++ P T LIF SGK+V TGAK+ E
Sbjct: 5 LDLKRI-ALQARNAEYNPKRFAAVIMRIRSPRTTALIFSSGKMVCTGAKSEE 55
>gi|8777983|gb|AAF79168.1| TATA-box binding protein 1 [Habrotrocha constricta]
Length = 108
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/107 (68%), Positives = 88/107 (82%)
Query: 14 LECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLA 73
L C LDLK+IAL ARNAEYNP RF+AV MRI+ P+TTALIF SGK+VCTGAKSE + A
Sbjct: 1 LGCPLDLKRIALQARNAEYNPKRFAAVIMRIRNPRTTALIFGSGKMVCTGAKSEEDSLQA 60
Query: 74 ARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
AR+YAR++QK+GFP +F+DFKIQN+VGS DV+FPI+LE L H F
Sbjct: 61 ARRYARVIQKLGFPAKFRDFKIQNMVGSVDVKFPIRLEALVLKHYQF 107
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 107 PIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQ 160
P+ L+R+ A + Y P+ F +I R++ P T LIF SGK+V TGAK+ E
Sbjct: 4 PLDLKRI-ALQARNAEYNPKRFAAVIMRIRNPRTTALIFGSGKMVCTGAKSEED 56
>gi|332031263|gb|EGI70797.1| TATA box-binding protein-like protein 1 [Acromyrmex echinatior]
Length = 401
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 114/169 (67%), Gaps = 2/169 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
VI N+V + ++ C L+L++IAL+ N EY +TM+++ P TTA I+SSGK+ CTG
Sbjct: 173 VINNVVCSFSVRCHLNLREIALNGSNVEYRREN-GMITMKLRRPYTTASIWSSGKVTCTG 231
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE QAK+AAR++AR +QK+GF V+F ++++ N++G+C + F IK+ + H + Y
Sbjct: 232 ATSEVQAKIAARRFARSLQKLGFKVRFNNYRVVNVLGTCSMPFAIKITSFSVHHKENADY 291
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPEL PG+ Y++K+P T+ IF +G V +T + AA +IYP++
Sbjct: 292 EPELHPGVTYKLKEPKATLKIFSTGSVTVTAPNV-AAVQAAIEHIYPLV 339
>gi|326432016|gb|EGD77586.1| hypothetical protein PTSG_08683 [Salpingoeca sp. ATCC 50818]
Length = 185
Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 104/173 (60%), Gaps = 39/173 (22%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P + NIVAT+NL LDLK I L RNAEY+P RFSAV MRI+ P+TTAL+F++GK++CT
Sbjct: 49 PEVVNIVATVNLATHLDLKHITLSVRNAEYSPKRFSAVVMRIRSPRTTALVFATGKLICT 108
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKS A + ARK+A+I++KIGF
Sbjct: 109 GAKSTEDAYVGARKFAKIIKKIGF------------------------------------ 132
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
LFPGLI+RM P V +LIF+SGK+VITGAK+ E I AF+NI +L +
Sbjct: 133 ---SLFPGLIFRMADPRVVVLIFVSGKLVITGAKSHEDIEQAFDNICILLQTF 182
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 53/106 (50%), Gaps = 7/106 (6%)
Query: 57 GKIVCTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGF 116
G +V +G + + A + + + + G P ++ NIV + ++ + L+ +
Sbjct: 19 GAVVASGGNTGNAVSAAGGETSSALVQTGRP------EVVNIVATVNLATHLDLKHIT-L 71
Query: 117 HAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIY 162
+ Y P+ F ++ R++ P T L+F +GK++ TGAK+ E Y
Sbjct: 72 SVRNAEYSPKRFSAVVMRIRSPRTTALVFATGKLICTGAKSTEDAY 117
>gi|167522359|ref|XP_001745517.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775866|gb|EDQ89488.1| predicted protein [Monosiga brevicollis MX1]
Length = 211
Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 108/173 (62%), Gaps = 1/173 (0%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P ++N+VAT K++L ++ RN EYNP RF+A +R K P +T L+FSSGK+V
Sbjct: 31 ITPTVENVVATGYFSGKVNLAEVQKKTRNIEYNPRRFAACVIRNKLPHSTGLLFSSGKLV 90
Query: 61 CTGAKSESQAKLAARKYARIV-QKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAM 119
G KSE QA+ A K+ IV ++ V FKI N+VG DV F I L +L+ H+
Sbjct: 91 IMGCKSEEQAEQAWSKFQDIVIKRCNIAVTPTGFKIHNVVGKVDVGFKIDLHKLHMEHSK 150
Query: 120 FSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
F TY+PE FPGL YRM+ P+V +L+F SGKVV+T AK R ++ I P L
Sbjct: 151 FVTYDPETFPGLTYRMQDPSVVLLVFHSGKVVLTKAKTRLEMIEGLRRILPTL 203
>gi|221057235|ref|XP_002259755.1| transcription initiation factor TFiid,TATA-binding protein
[Plasmodium knowlesi strain H]
gi|193809827|emb|CAQ40531.1| transcription initiation factor TFiid,TATA-binding protein,
putative [Plasmodium knowlesi strain H]
Length = 250
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 117/179 (65%), Gaps = 4/179 (2%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+A I NI+A+ NL +DL+ +A+ RNAEYNPS+ + + +R+ +PK T LIF SG+++
Sbjct: 70 IALKIHNIIASANLSVDIDLRLVAISIRNAEYNPSKINTLIVRLNKPKCTVLIFKSGRLM 129
Query: 61 CTGAKSESQAKLAARKYARIVQKI-GFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAM 119
TG K+++ A +K +I++ + PV+ + F I+NI+ S D PI+LE L H
Sbjct: 130 LTGTKTKADAIYGCKKIGKIIKLVTNEPVKLEGFNIENIIASADCNMPIRLEMLAHDHKD 189
Query: 120 FSTYEPELFPGLIYRMK---KPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
+ YEPELF GL+YR K K +LIF+SGK++ITG K+ +++Y F++IY VL Y
Sbjct: 190 YCNYEPELFAGLVYRYKPTSKLKSVILIFVSGKIIITGCKSVQKLYTVFDDIYNVLLQY 248
>gi|380016952|ref|XP_003692431.1| PREDICTED: TATA box-binding protein-like protein 1-like [Apis
florea]
Length = 304
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 113/169 (66%), Gaps = 2/169 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
VI N+V + ++ C L+L++IAL+ N EY +TM+++ P TTA I+SSGK+ CTG
Sbjct: 63 VINNVVCSFSVRCHLNLREIALNGSNVEYRREN-GMITMKLRRPYTTASIWSSGKVTCTG 121
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE QAK+AAR++AR +QK+GF V+F ++++ N++G+C + F IK+ + H + Y
Sbjct: 122 ATSEVQAKIAARRFARSLQKLGFKVRFNNYRVVNVLGTCCMPFAIKITSFSSCHKENADY 181
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPEL PG+ Y++K+P T+ IF +G V +T + AA IYP++
Sbjct: 182 EPELHPGVTYKLKEPKATLKIFSTGSVTVTAPNV-AAVQAAIEYIYPLV 229
>gi|383852426|ref|XP_003701729.1| PREDICTED: TATA box-binding protein-like protein 1-like [Megachile
rotundata]
Length = 295
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 114/169 (67%), Gaps = 2/169 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
VI N+V + ++ C L+L++IAL+ N EY +TM+++ P TTA I+SSGK+ CTG
Sbjct: 68 VINNVVCSFSVRCHLNLREIALNGSNVEYR-RESGMITMKLRRPYTTASIWSSGKVTCTG 126
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE QAK+AAR++AR +QK+GF V+F ++++ N++G+C + F IK+ + +H + Y
Sbjct: 127 ATSEVQAKIAARRFARSLQKLGFKVRFNNYRVVNVLGTCCMPFAIKITSFSLYHKENADY 186
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPEL PG+ Y++K+P T+ IF +G V +T + AA IYP++
Sbjct: 187 EPELHPGVTYKLKEPKATLKIFSTGSVTVTAPNV-AAVQAAIEYIYPLV 234
>gi|119601082|gb|EAW80676.1| TATA box binding protein like 2, isoform CRA_b [Homo sapiens]
Length = 113
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/102 (68%), Positives = 83/102 (81%)
Query: 72 LAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGL 131
+ RKYAR+VQK+GFP +F DFKIQN+VGSCDV FPI+LE L H FS+YEPELFPGL
Sbjct: 7 ITQRKYARVVQKLGFPARFLDFKIQNMVGSCDVRFPIRLEGLVLTHQQFSSYEPELFPGL 66
Query: 132 IYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
IYRM KP + +LIF+SGKVV+TGAK R +IY AF NIYP+L
Sbjct: 67 IYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENIYPILK 108
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 5 IQNIVATINLECKLDLKKIAL-HARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
IQN+V + ++ + L+ + L H + + Y P F + R+ +P+ LIF SGK+V TG
Sbjct: 30 IQNMVGSCDVRFPIRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTG 89
Query: 64 AKSESQ 69
AK S+
Sbjct: 90 AKERSE 95
>gi|24640580|ref|NP_511084.2| TATA box binding protein-related factor 2, isoform J [Drosophila
melanogaster]
gi|45554500|ref|NP_996377.1| TATA box binding protein-related factor 2, isoform H [Drosophila
melanogaster]
gi|17862444|gb|AAL39699.1| LD27895p [Drosophila melanogaster]
gi|22831945|gb|AAF46368.2| TATA box binding protein-related factor 2, isoform J [Drosophila
melanogaster]
gi|45446857|gb|AAF46369.3| TATA box binding protein-related factor 2, isoform H [Drosophila
melanogaster]
Length = 632
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 113/171 (66%), Gaps = 4/171 (2%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
VI N+V + ++ C L L++IAL N EY VTM+++ P TTA I+SSG+I CTG
Sbjct: 203 VINNVVCSFSVGCHLKLREIALQGSNVEYRREN-GMVTMKLRHPYTTASIWSSGRITCTG 261
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SES AK+AAR+YAR + K+GFP +F +F+I N++G+C + + IK+ + H ++Y
Sbjct: 262 ATSESMAKVAARRYARCLGKLGFPTRFLNFRIVNVLGTCSMPWAIKIVNFSERHRENASY 321
Query: 124 EPELFPGLIYRMKKPN--VTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPEL PG+ Y+M+ P+ T+ IF +G V +T A + +A +IYP++
Sbjct: 322 EPELHPGVTYKMRDPDPKATLKIFSTGSVTVTAASV-NHVESAIQHIYPLV 371
>gi|350399828|ref|XP_003485652.1| PREDICTED: TATA box-binding protein-like protein 1-like [Bombus
impatiens]
Length = 290
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 113/169 (66%), Gaps = 2/169 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
VI N+V + ++ C L+L++IAL+ N EY +TM+++ P TTA I+SSGK+ CTG
Sbjct: 63 VINNVVCSFSVRCHLNLREIALNGSNVEYRREN-GMITMKLRRPYTTASIWSSGKVTCTG 121
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE QAK+AAR++AR +QK+GF V+F ++++ N++G+C + F IK+ + H + Y
Sbjct: 122 ATSEVQAKIAARRFARSLQKLGFKVRFNNYRVVNVLGTCCMPFAIKITSFSSCHKENADY 181
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPEL PG+ Y++K+P T+ IF +G V +T + AA IYP++
Sbjct: 182 EPELHPGVTYKLKEPKATLKIFSTGSVTVTAPNV-AAVQAAIEYIYPLV 229
>gi|328791980|ref|XP_396371.4| PREDICTED: TATA box binding protein-related factor 2 isoform 1
[Apis mellifera]
Length = 306
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 113/169 (66%), Gaps = 2/169 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
VI N+V + ++ C L+L++IAL+ N EY +TM+++ P TTA I+SSGK+ CTG
Sbjct: 63 VINNVVCSFSVRCHLNLREIALNGSNVEYRREN-GMITMKLRRPYTTASIWSSGKVTCTG 121
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE QAK+AAR++AR +QK+GF V+F ++++ N++G+C + F IK+ + H + Y
Sbjct: 122 ATSEVQAKIAARRFARSLQKLGFKVRFNNYRVVNVLGTCCMPFAIKITSFSSCHKENADY 181
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPEL PG+ Y++K+P T+ IF +G V +T + AA IYP++
Sbjct: 182 EPELHPGVTYKLKEPKATLKIFSTGSVTVTAPNV-AAVQAAIEYIYPLV 229
>gi|307191585|gb|EFN75083.1| TATA box-binding protein-like protein 1 [Harpegnathos saltator]
Length = 297
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 113/169 (66%), Gaps = 2/169 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
VI N+V + ++ C L+L++IAL N EY +TM+++ P TTA I+SSGK+ CTG
Sbjct: 72 VINNVVCSFSVRCHLNLREIALKGSNVEYRREN-GMITMKLRRPYTTASIWSSGKVTCTG 130
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE QAK+AAR++AR +QK+GF V+F ++++ N++G+C + F IK+ + +H + Y
Sbjct: 131 ATSEVQAKIAARRFARSLQKLGFQVRFNNYRVVNVLGTCCMPFAIKITSFSVYHKENAEY 190
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPEL PG+ Y++K+P T+ IF +G V +T + AA IYP++
Sbjct: 191 EPELHPGVTYKLKEPKATLKIFSTGSVTVTAPNV-ASVQAAIEYIYPLV 238
>gi|145509947|ref|XP_001440912.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124408140|emb|CAK73515.1| unnamed protein product [Paramecium tetraurelia]
Length = 201
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/179 (46%), Positives = 114/179 (63%), Gaps = 7/179 (3%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P IQN+V+T++L +L+L I+ AR AEYNP RFSAV MR+ P TTALIF SGK+VCT
Sbjct: 25 PKIQNVVSTVDLGTELNLVVISNGARMAEYNPKRFSAVIMRLSNPSTTALIFQSGKMVCT 84
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
GAKSE Q+ +AARKYA+I+ K+GFPV + S L + + ++
Sbjct: 85 GAKSEDQSLIAARKYAKIINKLGFPV----VTLLQASTSESQSNQTNLLKDQQYRSVVQ- 139
Query: 123 YEPELFPGLIYR--MKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYD 179
YEPE+FPGLI+R + +T+LIF+SG+ VITG K E + F I P+L+ + D
Sbjct: 140 YEPEIFPGLIFRKITDQKKITLLIFVSGRCVITGGKKTEDLNNVFKFILPILDQFKKRD 198
>gi|4688680|emb|CAB41475.1| TBP-like factor [Drosophila melanogaster]
Length = 537
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 113/171 (66%), Gaps = 4/171 (2%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
VI N+V + ++ C L L++IAL N EY VTM+++ P TTA I+SSG+I CTG
Sbjct: 108 VINNVVCSFSVGCHLKLREIALQGSNVEYRREN-GMVTMKLRHPYTTASIWSSGRITCTG 166
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SES AK+AAR+YAR + K+GFP +F +F+I N++G+C + + IK+ + H ++Y
Sbjct: 167 ATSESMAKVAARRYARCLGKLGFPTRFLNFRIVNVLGTCSMPWAIKIVNFSERHRENASY 226
Query: 124 EPELFPGLIYRMKKPN--VTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPEL PG+ Y+M+ P+ T+ IF +G V +T A + +A +IYP++
Sbjct: 227 EPELHPGVTYKMRDPDPKATLKIFSTGSVTVTAASV-NHVESAIQHIYPLV 276
>gi|340712494|ref|XP_003394794.1| PREDICTED: TATA box-binding protein-like protein 1-like [Bombus
terrestris]
Length = 290
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 113/169 (66%), Gaps = 2/169 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
VI N+V + ++ C L+L++IAL+ N EY +TM+++ P TTA I+SSGK+ CTG
Sbjct: 63 VINNVVCSFSVRCHLNLREIALNGSNVEYRREN-GMITMKLRRPYTTASIWSSGKVTCTG 121
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE QAK+AAR++AR +QK+GF V+F ++++ N++G+C + F IK+ + H + Y
Sbjct: 122 ATSEVQAKIAARRFARSLQKLGFKVRFNNYRVVNVLGTCCMPFAIKITSFSSCHKENADY 181
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPEL PG+ Y++K+P T+ IF +G V +T + AA IYP++
Sbjct: 182 EPELHPGVTYKLKEPKATLKIFSTGSVTVTAPNV-AAVQAAIEYIYPLV 229
>gi|195044570|ref|XP_001991843.1| GH11849 [Drosophila grimshawi]
gi|193901601|gb|EDW00468.1| GH11849 [Drosophila grimshawi]
Length = 689
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 73/172 (42%), Positives = 115/172 (66%), Gaps = 2/172 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
VI N+V + ++ C L L++IAL+ N EY VTM+++ P TTA I+SSG+I CTG
Sbjct: 213 VINNVVCSFSVRCHLKLREIALNGSNVEYRREN-GMVTMKLRRPYTTASIWSSGRITCTG 271
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE QAK+AAR+YAR + K+GFP F+ F+I N++G+C + + IK+ + H ++Y
Sbjct: 272 ATSELQAKIAARRYARCLGKLGFPTHFQHFRIVNVLGTCSMPWAIKIVNFSERHRDNASY 331
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
EPEL PG+ Y+M++P T+ IF +G + +T A + +A +IYP+++ +
Sbjct: 332 EPELHPGVTYKMREPKATLKIFSTGSITVT-APTVNDVESAIQHIYPLVHEF 382
>gi|322796560|gb|EFZ19034.1| hypothetical protein SINV_07503 [Solenopsis invicta]
Length = 303
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 112/169 (66%), Gaps = 2/169 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
VI N+V + ++ C L+L++IAL N EY +TM+++ P TTA I+SSGK+ CTG
Sbjct: 78 VINNVVCSFSVRCHLNLREIALKGSNVEYRREN-GMITMKLRRPYTTASIWSSGKVTCTG 136
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE QAK+AAR++AR +QK+GF V+F ++++ N++G+C + F IK+ + H + Y
Sbjct: 137 ATSEVQAKIAARRFARSLQKLGFKVRFNNYRVVNVLGTCCMPFAIKITSFSIHHKENADY 196
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPEL PG+ Y++K P T+ IF +G V +T + AA +IYP++
Sbjct: 197 EPELHPGVTYKLKDPKATLKIFSTGSVTVTAPNV-AAVQAAIEHIYPLV 244
>gi|389584271|dbj|GAB67004.1| transcription initiation factor TFiid TATA-binding protein, partial
[Plasmodium cynomolgi strain B]
Length = 246
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/172 (43%), Positives = 114/172 (66%), Gaps = 4/172 (2%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I NI+A+ NL ++DL+ +A+ RNAEYNPS+ + + +R+ +PK T LIF SG+++ TG
Sbjct: 74 IHNIIASANLSVEIDLRLVAISIRNAEYNPSKINTLIVRLNKPKCTVLIFKSGRLMLTGT 133
Query: 65 KSESQAKLAARKYARIVQKI-GFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
K++ A A +K +I++ + V+ + F I+NI+ S D PI+LE L H + Y
Sbjct: 134 KTKGDAIYACKKIGKIIRLVTNESVKLEGFNIENIIASADCNMPIRLEMLAHDHKDYCNY 193
Query: 124 EPELFPGLIYRMK---KPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPELF GL+YR K K +LIF+SGK++ITG K+ +++Y F++IY VL
Sbjct: 194 EPELFAGLVYRYKPTSKLKSVILIFVSGKIIITGCKSVQKLYTVFDDIYNVL 245
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 94 KIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVIT 153
KI NI+ S ++ I L RL + Y P LI R+ KP T+LIF SG++++T
Sbjct: 73 KIHNIIASANLSVEIDL-RLVAISIRNAEYNPSKINTLIVRLNKPKCTVLIFKSGRLMLT 131
Query: 154 GAKAR-EQIYAA 164
G K + + IYA
Sbjct: 132 GTKTKGDAIYAC 143
>gi|8777975|gb|AAF79164.1|AF249987_1 TATA-box binding protein 1 [Macrotrachela quadricornifera]
Length = 108
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/107 (67%), Positives = 88/107 (82%)
Query: 14 LECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLA 73
L C LDLK+IAL ARNAEYNP RF+AV M I+ P+TTALIF SGK+VCTGAKSE+ + A
Sbjct: 1 LGCPLDLKRIALQARNAEYNPKRFAAVIMCIRSPRTTALIFGSGKMVCTGAKSENDSLQA 60
Query: 74 ARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
AR+YAR++QK+GFP +F+DFKIQN+VGS DV+FPI+LE L H F
Sbjct: 61 ARRYARVIQKLGFPAKFRDFKIQNMVGSVDVKFPIRLEALVLKHYQF 107
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 107 PIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKA 157
P+ L+R+ A + Y P+ F +I ++ P T LIF SGK+V TGAK+
Sbjct: 4 PLDLKRI-ALQARNAEYNPKRFAAVIMCIRSPRTTALIFGSGKMVCTGAKS 53
>gi|442615484|ref|NP_001259329.1| TATA box binding protein-related factor 2, isoform I [Drosophila
melanogaster]
gi|440216531|gb|AGB95174.1| TATA box binding protein-related factor 2, isoform I [Drosophila
melanogaster]
Length = 1714
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 74/171 (43%), Positives = 113/171 (66%), Gaps = 4/171 (2%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
VI N+V + ++ C L L++IAL N EY VTM+++ P TTA I+SSG+I CTG
Sbjct: 1285 VINNVVCSFSVGCHLKLREIALQGSNVEYRREN-GMVTMKLRHPYTTASIWSSGRITCTG 1343
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SES AK+AAR+YAR + K+GFP +F +F+I N++G+C + + IK+ + H ++Y
Sbjct: 1344 ATSESMAKVAARRYARCLGKLGFPTRFLNFRIVNVLGTCSMPWAIKIVNFSERHRENASY 1403
Query: 124 EPELFPGLIYRMKKPN--VTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPEL PG+ Y+M+ P+ T+ IF +G V +T A + +A +IYP++
Sbjct: 1404 EPELHPGVTYKMRDPDPKATLKIFSTGSVTVTAASV-NHVESAIQHIYPLV 1453
>gi|161077628|ref|NP_001096905.1| TATA box binding protein-related factor 2, isoform E [Drosophila
melanogaster]
gi|281360601|ref|NP_001162701.1| TATA box binding protein-related factor 2, isoform F [Drosophila
melanogaster]
gi|442615486|ref|NP_001259330.1| TATA box binding protein-related factor 2, isoform G [Drosophila
melanogaster]
gi|76446337|gb|ABA42953.1| TRF2 [Drosophila melanogaster]
gi|158031744|gb|ABW09355.1| TATA box binding protein-related factor 2, isoform E [Drosophila
melanogaster]
gi|272506032|gb|ACZ95236.1| TATA box binding protein-related factor 2, isoform F [Drosophila
melanogaster]
gi|440216532|gb|AGB95175.1| TATA box binding protein-related factor 2, isoform G [Drosophila
melanogaster]
Length = 1715
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 74/171 (43%), Positives = 113/171 (66%), Gaps = 4/171 (2%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
VI N+V + ++ C L L++IAL N EY VTM+++ P TTA I+SSG+I CTG
Sbjct: 1286 VINNVVCSFSVGCHLKLREIALQGSNVEYRREN-GMVTMKLRHPYTTASIWSSGRITCTG 1344
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SES AK+AAR+YAR + K+GFP +F +F+I N++G+C + + IK+ + H ++Y
Sbjct: 1345 ATSESMAKVAARRYARCLGKLGFPTRFLNFRIVNVLGTCSMPWAIKIVNFSERHRENASY 1404
Query: 124 EPELFPGLIYRMKKPN--VTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPEL PG+ Y+M+ P+ T+ IF +G V +T A + +A +IYP++
Sbjct: 1405 EPELHPGVTYKMRDPDPKATLKIFSTGSVTVTAASV-NHVESAIQHIYPLV 1454
>gi|194769912|ref|XP_001967045.1| GF21727 [Drosophila ananassae]
gi|190622840|gb|EDV38364.1| GF21727 [Drosophila ananassae]
Length = 1683
Score = 152 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 72/169 (42%), Positives = 113/169 (66%), Gaps = 2/169 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
VI N+V + ++ C L L+ IAL+ N EY VTM+++ P TTA I+SSG+I CTG
Sbjct: 1244 VINNVVCSFSVRCHLKLRDIALNGSNVEYRREN-GMVTMKLRHPYTTASIWSSGRITCTG 1302
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE AK+AAR+YAR + K+GFP +F++F+I N++G+C + + IK+ + H ++Y
Sbjct: 1303 ATSEPMAKVAARRYARCLGKLGFPTRFQNFRIVNVLGTCSMPWAIKIVNFSERHRENASY 1362
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPEL PG+ Y+M+ P T+ IF +G + +T A + + AA +I+P++
Sbjct: 1363 EPELHPGVTYKMRDPKATLKIFSTGSITVTAASVND-VEAAIQHIFPLV 1410
>gi|405976239|gb|EKC40752.1| TATA box-binding-like protein 1 [Crassostrea gigas]
Length = 280
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 117/177 (66%), Gaps = 2/177 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+I N+V + N C L+L+ IA+ + EY + S V M+I+ P TTA I+SSGKIVCTG
Sbjct: 50 IINNVVCSFNTRCHLNLRSIAMEGSHVEYRREQ-SMVNMKIRRPYTTATIWSSGKIVCTG 108
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE ++K+AARK+AR +Q++G+ V F +F++ N++G+C + F IK+ + H ++Y
Sbjct: 109 ATSEEESKIAARKFARKLQRLGYKVTFTNFRVVNVLGTCGMPFRIKIAGFSQKHPKDASY 168
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYDQ 180
EPEL PG+ Y++K P T+ IF +G + +T A + AA +I+P+++ + D+
Sbjct: 169 EPELHPGVTYKIKDPKATLKIFSTGSITVT-APCVANVQAAIEHIFPLVSEFKAEDR 224
>gi|198471801|ref|XP_001355729.2| GA14764 [Drosophila pseudoobscura pseudoobscura]
gi|198146086|gb|EAL32788.2| GA14764 [Drosophila pseudoobscura pseudoobscura]
Length = 1037
Score = 152 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 73/172 (42%), Positives = 114/172 (66%), Gaps = 2/172 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
VI N+V + ++ C L L+ IAL N EY VTM+++ P TTA I+SSG+I CTG
Sbjct: 553 VINNVVCSFSVRCHLKLRDIALRGCNVEYRREN-GMVTMKLRRPYTTASIWSSGRITCTG 611
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE AK+AAR+YAR + K+GFP +F++F+I N++G+C + + IK+ + H ++Y
Sbjct: 612 ATSEIMAKVAARRYARCLGKLGFPTRFQNFRIVNVLGTCSMPWAIKIVNFSEKHRDNASY 671
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
EPEL PG+ Y+MK P T+ IF +G + +T A + + +A +IYP+++ +
Sbjct: 672 EPELHPGVTYKMKMPKATLKIFSTGSITVTAASVND-VESAIQHIYPLVHEF 722
>gi|195164313|ref|XP_002022993.1| GL16412 [Drosophila persimilis]
gi|194105055|gb|EDW27098.1| GL16412 [Drosophila persimilis]
Length = 987
Score = 152 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 73/172 (42%), Positives = 114/172 (66%), Gaps = 2/172 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
VI N+V + ++ C L L+ IAL N EY VTM+++ P TTA I+SSG+I CTG
Sbjct: 502 VINNVVCSFSVRCHLKLRDIALRGCNVEYRREN-GMVTMKLRRPYTTASIWSSGRITCTG 560
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE AK+AAR+YAR + K+GFP +F++F+I N++G+C + + IK+ + H ++Y
Sbjct: 561 ATSEIMAKVAARRYARCLGKLGFPTRFQNFRIVNVLGTCSMPWAIKIVNFSEKHRDNASY 620
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
EPEL PG+ Y+MK P T+ IF +G + +T A + + +A +IYP+++ +
Sbjct: 621 EPELHPGVTYKMKMPKATLKIFSTGSITVTAASVND-VESAIQHIYPLVHEF 671
>gi|194891201|ref|XP_001977450.1| GG18249 [Drosophila erecta]
gi|190649099|gb|EDV46377.1| GG18249 [Drosophila erecta]
Length = 641
Score = 152 bits (383), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 112/171 (65%), Gaps = 4/171 (2%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
VI N+V + ++ C L L+ IAL N EY VTM+++ P TTA I+SSG+I CTG
Sbjct: 218 VINNVVCSFSVGCHLKLRDIALQGSNVEYR-RENGMVTMKLRHPYTTASIWSSGRITCTG 276
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE+ AK+AAR+YAR + K+GFP +F +F+I N++G+C + + IK+ + H ++Y
Sbjct: 277 ATSEAMAKVAARRYARCLGKLGFPTRFLNFRIVNVLGTCSMPWAIKIVNFSERHRENASY 336
Query: 124 EPELFPGLIYRMKKPN--VTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPEL PG+ Y+M+ P+ T+ IF +G V +T A + +A +IYP++
Sbjct: 337 EPELHPGVTYKMRDPDPKATLKIFSTGSVTVTAASV-SHVESAIQHIYPLV 386
>gi|345312931|ref|XP_001513505.2| PREDICTED: TATA box-binding protein-like protein 2-like
[Ornithorhynchus anatinus]
Length = 170
Score = 151 bits (382), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 81/155 (52%), Positives = 102/155 (65%), Gaps = 18/155 (11%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLK+IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 18 PQLQNIVSTVNLACKLDLKRIALQARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 77
Query: 63 GAKSESQAK---LAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAM 119
G++ + AR R + F+D V + + +R +
Sbjct: 78 GSQKRPTGNVFLVDARDGDRALATF----SFRD------VSTVKISLSRPPDRDD----- 122
Query: 120 FSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITG 154
TYEPELFPGLIYRM KP + +LIF+SGKVV+TG
Sbjct: 123 IPTYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTG 157
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 94 KIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVIT 153
++QNIV + ++ + L+R+ A + Y P+ F +I R+++P T LIF SGK+V T
Sbjct: 19 QLQNIVSTVNLACKLDLKRI-ALQARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 77
Query: 154 GAKAR 158
G++ R
Sbjct: 78 GSQKR 82
>gi|153791987|ref|NP_001093265.1| TATA box binding protein-like 1 [Takifugu rubripes]
gi|148910859|tpg|DAA06040.1| TPA_inf: TATA box binding protein-like 1 [Takifugu rubripes]
Length = 185
Score = 151 bits (382), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/170 (42%), Positives = 109/170 (64%), Gaps = 2/170 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+I N+VAT C L+L+ IAL N Y P + VTM++++P+ TA I+SSGKI+CTG
Sbjct: 12 IISNVVATFRTRCHLNLRTIALEGNNVIYKPEQ-GTVTMKLRKPRITANIWSSGKIICTG 70
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE +AKL AR+ AR +QK+GF V+F FK+ N++ C + F I L + +TY
Sbjct: 71 ASSEDEAKLGARRLARCLQKLGFKVKFSAFKVVNVMAGCSMPFKISLIDFTKKNRPIATY 130
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
EPEL+P +Y M++P T+ +F +G V I G + + AA ++YP+L+
Sbjct: 131 EPELYPAAMYTMRQPKATIKVFSTGSVTILGPSV-DNVAAAVQHVYPLLS 179
>gi|156094392|ref|XP_001613233.1| transcription initiation factor TFiid, TATA-binding protein
[Plasmodium vivax Sal-1]
gi|148802107|gb|EDL43506.1| transcription initiation factor TFiid, TATA-binding protein,
putative [Plasmodium vivax]
Length = 250
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 115/175 (65%), Gaps = 4/175 (2%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I NI+A+ NL +DL+ +A+ RNAEYNPS+ + + +R+ +PK TALIF +G+I+ TG
Sbjct: 74 IHNIIASANLCVDIDLRLVAISIRNAEYNPSKINTLIVRLNKPKCTALIFKNGRIMLTGT 133
Query: 65 KSESQAKLAARKYARIVQKI-GFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
K+++ A +K +I++ + V+ + F I+NI+ S D P++LE L H + Y
Sbjct: 134 KTKADAIYGCKKIGKIIKLVTNESVKLEGFNIENIIASADCNMPVRLEMLAHDHKEYCNY 193
Query: 124 EPELFPGLIYRMK---KPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
EPELF GL+YR K K +LIF+SGK++ITG K+ +++Y F++IY VL Y
Sbjct: 194 EPELFAGLVYRYKPTSKLKSVILIFVSGKIIITGCKSVQKLYTVFDDIYNVLLQY 248
>gi|4741972|gb|AAD28784.1|AF136569_1 TATA box binding protein-related factor 2 [Drosophila melanogaster]
Length = 632
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 74/171 (43%), Positives = 113/171 (66%), Gaps = 4/171 (2%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
VI N+V + ++ C L L++IAL N EY VTM+++ P TTA I+SSG+I CTG
Sbjct: 203 VINNVVCSFSVGCHLKLREIALQGSNVEYRREN-GMVTMKLRHPYTTASIWSSGRITCTG 261
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SES AK+AAR+YAR + K+GFP +F +F+I N++G+C + + IK+ + H ++Y
Sbjct: 262 ATSESMAKVAARRYARCLGKLGFPTRFLNFRIVNVLGTCSMPWAIKIVNFSERHRENASY 321
Query: 124 EPELFPGLIYRMKKPN--VTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPEL PG+ Y+M+ P+ T+ IF +G V +T A + +A +IYP++
Sbjct: 322 EPELHPGVTYKMRDPDPKATLKIFSTGSVTVTAASV-NHVESAIQHIYPLV 371
>gi|158285534|ref|XP_308361.4| AGAP007517-PA [Anopheles gambiae str. PEST]
gi|157020038|gb|EAA04678.5| AGAP007517-PA [Anopheles gambiae str. PEST]
Length = 553
Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 71/169 (42%), Positives = 110/169 (65%), Gaps = 2/169 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
VI N+V + ++ C L+L IA H N E+ VTM+++ P TTA I+SSGKI CTG
Sbjct: 255 VINNVVCSFSVRCHLNLHDIARHGHNVEFR-REHGMVTMKLRRPYTTASIWSSGKITCTG 313
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE QAK+AAR+Y+R +QK+GF V+F++F+I N++G+C + F I + + + ++Y
Sbjct: 314 ATSEHQAKIAARRYSRCLQKLGFNVRFRNFRIVNVLGTCSMPFGIMIVNFSEKYKKDASY 373
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPEL PG+ Y++ P T+ IF +G + +T A + AA I+P++
Sbjct: 374 EPELHPGVTYKLYSPKATLKIFSTGSITVTAASV-AFVQAAIEQIFPLV 421
>gi|325969184|ref|YP_004245376.1| 2-alkenal reductase [Vulcanisaeta moutnovskia 768-28]
gi|323708387|gb|ADY01874.1| 2-alkenal reductase [Vulcanisaeta moutnovskia 768-28]
Length = 193
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/169 (46%), Positives = 110/169 (65%), Gaps = 2/169 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVAT+NL LDL K+A AEYNP +F + +R++ PK +ALIF +GK+VCTGA
Sbjct: 8 IENIVATVNLGIDLDLDKLAERLPAAEYNPEQFPGLILRLQRPKISALIFRTGKMVCTGA 67
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KSE++ K A ++ R++ + G V + ++QNIV S ++ + +E+ + S Y
Sbjct: 68 KSENELKRAVKELVRLLNEHGADVPLTPEIQVQNIVASGNLHAEVDIEK-SALMLENSMY 126
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPE FPGLIYRM P V +LIF SGK+V TGAK +Q+ A I+ VL
Sbjct: 127 EPEQFPGLIYRMDDPKVVLLIFSSGKIVCTGAKKEQQVRDAVFKIHDVL 175
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 53/81 (65%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
+QNIVA+ NL ++D++K AL N+ Y P +F + R+ +PK LIFSSGKIVCTGA
Sbjct: 99 VQNIVASGNLHAEVDIEKSALMLENSMYEPEQFPGLIYRMDDPKVVLLIFSSGKIVCTGA 158
Query: 65 KSESQAKLAARKYARIVQKIG 85
K E Q + A K +++ IG
Sbjct: 159 KKEQQVRDAVFKIHDVLRDIG 179
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
++I+NIV + ++ + L++L + Y PE FPGLI R+++P ++ LIF +GK+V
Sbjct: 6 YRIENIVATVNLGIDLDLDKL-AERLPAAEYNPEQFPGLILRLQRPKISALIFRTGKMVC 64
Query: 153 TGAKAREQIYAAFNNIYPVLNVY 175
TGAK+ ++ A + +LN +
Sbjct: 65 TGAKSENELKRAVKELVRLLNEH 87
>gi|195480136|ref|XP_002101150.1| GE15780 [Drosophila yakuba]
gi|194188674|gb|EDX02258.1| GE15780 [Drosophila yakuba]
Length = 1872
Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 72/171 (42%), Positives = 112/171 (65%), Gaps = 4/171 (2%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
VI N+V + ++ C L L+ IAL N E+ VTM+++ P TTA I+SSG+I CTG
Sbjct: 1444 VINNVVCSFSVGCHLKLRDIALQGSNVEFRREN-GMVTMKLRHPYTTASIWSSGRITCTG 1502
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE+ AK+AAR+YAR + K+GFP +F +F+I N++G+C + + IK+ + H ++Y
Sbjct: 1503 ATSEAMAKVAARRYARCLGKLGFPTRFLNFRIVNVLGTCSMPWAIKIVNFSERHRENASY 1562
Query: 124 EPELFPGLIYRMKKPN--VTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPEL PG+ Y+M+ P+ T+ IF +G V +T A + +A +IYP++
Sbjct: 1563 EPELHPGVTYKMRDPDPKATLKIFSTGSVTVTAASV-SHVESAIQHIYPLV 1612
>gi|307594950|ref|YP_003901267.1| TATA-box binding family protein [Vulcanisaeta distributa DSM 14429]
gi|307550151|gb|ADN50216.1| TATA-box binding family protein [Vulcanisaeta distributa DSM 14429]
Length = 193
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 110/169 (65%), Gaps = 2/169 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVAT+NL LDL K+A AEYNP +F + +R++ PK +ALIF +GK+VCTGA
Sbjct: 8 IENIVATVNLGIDLDLDKLAERLPAAEYNPEQFPGLILRLQRPKISALIFRTGKMVCTGA 67
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KSE++ K A ++ R++ + G V + ++QNIV S ++ + +E+ + S Y
Sbjct: 68 KSENELKRAVKELVRLLNEHGADVPLTPEIQVQNIVASGNLHAEVDIEK-SALMLENSMY 126
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPE FPGLIYRM P V +LIF SGK+V TGAK +Q+ A I+ +L
Sbjct: 127 EPEQFPGLIYRMDDPKVVLLIFSSGKIVCTGAKKEQQVRDAVFKIHDIL 175
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 53/81 (65%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
+QNIVA+ NL ++D++K AL N+ Y P +F + R+ +PK LIFSSGKIVCTGA
Sbjct: 99 VQNIVASGNLHAEVDIEKSALMLENSMYEPEQFPGLIYRMDDPKVVLLIFSSGKIVCTGA 158
Query: 65 KSESQAKLAARKYARIVQKIG 85
K E Q + A K I++ IG
Sbjct: 159 KKEQQVRDAVFKIHDILKDIG 179
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
++I+NIV + ++ + L++L + Y PE FPGLI R+++P ++ LIF +GK+V
Sbjct: 6 YRIENIVATVNLGIDLDLDKL-AERLPAAEYNPEQFPGLILRLQRPKISALIFRTGKMVC 64
Query: 153 TGAKAREQIYAAFNNIYPVLNVY 175
TGAK+ ++ A + +LN +
Sbjct: 65 TGAKSENELKRAVKELVRLLNEH 87
>gi|124027807|ref|YP_001013127.1| transcription factor [Hyperthermus butylicus DSM 5456]
gi|123978501|gb|ABM80782.1| TATA-box binding protein [Hyperthermus butylicus DSM 5456]
Length = 202
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/169 (48%), Positives = 107/169 (63%), Gaps = 2/169 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVAT++L+ +LDL+ I EYNP +F + R+ EPK TALIF SGK+V TGA
Sbjct: 26 IENIVATVSLDQQLDLRLIERSILTVEYNPEQFPGLVYRLDEPKVTALIFKSGKMVVTGA 85
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KS A +K R ++K G P+ + +IQNIV S ++ + LER S Y
Sbjct: 86 KSTKDLIEAVKKIVRNLKKHGIPIYGRPKVQIQNIVASANLNVCVDLERA-ALTLENSMY 144
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPE FPGLI+RM +P V +LIF SGK+VITGAK E++Y A N IY L
Sbjct: 145 EPEQFPGLIHRMDEPRVVLLIFSSGKMVITGAKREEEVYEAVNKIYEKL 193
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 49/80 (61%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQNIVA+ NL +DL++ AL N+ Y P +F + R+ EP+ LIFSSGK+V TGA
Sbjct: 117 IQNIVASANLNVCVDLERAALTLENSMYEPEQFPGLIHRMDEPRVVLLIFSSGKMVITGA 176
Query: 65 KSESQAKLAARKYARIVQKI 84
K E + A K ++K+
Sbjct: 177 KREEEVYEAVNKIYEKLKKL 196
>gi|298712244|emb|CBJ26695.1| transcription initiation factor TFIID [Ectocarpus siliculosus]
Length = 214
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 110/181 (60%), Gaps = 6/181 (3%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
V+QN+ AT+N+ +D +A R+AEYNP + AV MRI+EP+ T L+FSSGK+V TG
Sbjct: 34 VLQNVTATVNMRITIDPSSLANKIRHAEYNPKKLPAVVMRIREPQATGLLFSSGKVVITG 93
Query: 64 AKSESQAKLAARKYARIVQKIGF-----PVQFKDFKIQNIVGSCDVEFPIKLERLNGFHA 118
A A+ AA+++ +V+ +G P Q + F +QN+V + +V+ PI LE + A
Sbjct: 94 AAGVEAAREAAQRFVAVVEGVGLNPTTNPNQLR-FAVQNMVATFEVDAPISLELMAYCQA 152
Query: 119 MFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTY 178
+ YEPELFPGLIY+ V +F SG+VV+TG K + + A + P+LN Y
Sbjct: 153 RWCMYEPELFPGLIYQTAHRGVVAHVFSSGRVVLTGGKQEDHLNEALVRLLPILNQYRQP 212
Query: 179 D 179
D
Sbjct: 213 D 213
>gi|47205581|emb|CAF96147.1| unnamed protein product [Tetraodon nigroviridis]
gi|47224248|emb|CAG09094.1| unnamed protein product [Tetraodon nigroviridis]
Length = 185
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 107/170 (62%), Gaps = 2/170 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+I N+VAT C L+L+ IAL N Y P + VTM++++P+ TA I+SSGKI+CTG
Sbjct: 12 IISNVVATFRTRCHLNLRTIALEGNNVIYKPEQ-GTVTMKLRKPRITANIWSSGKIICTG 70
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE +AK+ AR+ AR +QK+GF V F FK+ N++ +C + F I L + +TY
Sbjct: 71 ASSEDEAKMGARRLARCLQKLGFKVSFSAFKVVNVMATCAMPFKISLIDFTKRNRPIATY 130
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
EPEL P +Y M+ P T+ +F +G V I G + + AA ++YP+L+
Sbjct: 131 EPELHPAAMYTMRHPKATVKVFATGSVTILGPSV-DNVAAAVQHVYPLLS 179
>gi|307181017|gb|EFN68791.1| TATA box-binding protein-like protein 1 [Camponotus floridanus]
Length = 304
Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 71/169 (42%), Positives = 113/169 (66%), Gaps = 2/169 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
VI N+V + ++ C L+L++IAL+ N EY +TM+++ P TTA I+SSGK+ CTG
Sbjct: 77 VINNVVCSFSVRCHLNLREIALNGSNVEYRREN-GMITMKLRRPYTTASIWSSGKVTCTG 135
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE QAK+AAR++AR +QK+GF V+F ++++ N++G+C + F IK+ + H + Y
Sbjct: 136 ATSEIQAKIAARRFARSLQKLGFKVRFNNYRVVNVLGTCCMPFAIKITLFSVHHKENADY 195
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPEL PG+ Y++K+ T+ IF +G V +T + AA +IYP++
Sbjct: 196 EPELHPGVTYKLKELKATLKIFSTGSVTVTAPNVA-AVQAAIEHIYPLV 243
>gi|399217563|emb|CCF74450.1| unnamed protein product [Babesia microti strain RI]
Length = 283
Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 121/185 (65%), Gaps = 11/185 (5%)
Query: 2 APVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVC 61
+P +QNIVA++ + +DL+++A+ RNAEYNP + +A+ R+ +PK T+L+F +G+I+
Sbjct: 97 SPTVQNIVASVYIGIDIDLRQVAISTRNAEYNPKKVNALIFRLLKPKCTSLMFQTGRIMI 156
Query: 62 TGAKSESQAKLAARKYARIVQKI--GFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAM 119
TGAK+ AK+ A++ +++ K+ ++FK+FKI+NI+ + D P++LE L +
Sbjct: 157 TGAKTIEDAKIGAKRIVKLLLKVLKSENIRFKNFKIENIIATADCCLPVRLESLARDYRE 216
Query: 120 FSTYEPELF------PGLIYR---MKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYP 170
F +YEPELF GL+YR + +L+F+SGK++ITG K+ +++ F +YP
Sbjct: 217 FCSYEPELFAGEIFDSGLVYRCPPTRNTKAVLLVFVSGKIIITGCKSMREVHRVFTYMYP 276
Query: 171 VLNVY 175
+L Y
Sbjct: 277 ILRQY 281
>gi|427787417|gb|JAA59160.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 321
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 115/172 (66%), Gaps = 2/172 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
VI N+V + ++ C L+L++IAL A N EY +TM+I+ P TTA ++SSGK+ CTG
Sbjct: 83 VINNVVCSFSVRCHLNLRQIALTASNVEYR-RENGMLTMKIRTPYTTASMWSSGKVTCTG 141
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE AKLAAR+YARI+QK+GF V+F ++++ N++G+C + F IKL + + ++Y
Sbjct: 142 ATSEETAKLAARRYARILQKLGFRVKFMNYRVVNVLGTCTMPFAIKLIPFSQSNRPIASY 201
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
EPEL PG+ Y++K T+ IF +G + +T A + + +A I+P++ Y
Sbjct: 202 EPELHPGVTYKIKDLKATLKIFSTGSITVT-APSVANVQSAIEQIFPLVYEY 252
>gi|347963631|ref|XP_001687775.2| AGAP000336-PA [Anopheles gambiae str. PEST]
gi|333467108|gb|EDO64342.2| AGAP000336-PA [Anopheles gambiae str. PEST]
Length = 533
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 113/169 (66%), Gaps = 2/169 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
VI N+V + ++ C L+L+ IAL+ N E+ VTM+++ P TTA I+SSGKI CTG
Sbjct: 247 VINNVVCSFSVRCHLNLRDIALYGDNVEFR-RENGMVTMKLRRPYTTASIWSSGKITCTG 305
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE QAK+AAR+Y+R +QK+GF V+ ++F+I N++G+C + + IK+ + + ++Y
Sbjct: 306 ATSEDQAKVAARRYSRCLQKLGFNVRLRNFRIVNVLGTCAMPWGIKIVNFSEKYKKDASY 365
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPEL PG+ Y++ P T+ IF +G + +T A + AA +I+P++
Sbjct: 366 EPELHPGVTYKLHSPRATLKIFSTGSITVTAASV-AFVQAAIEHIFPLV 413
>gi|301103642|ref|XP_002900907.1| TATA-box-binding protein, putative [Phytophthora infestans T30-4]
gi|262101662|gb|EEY59714.1| TATA-box-binding protein, putative [Phytophthora infestans T30-4]
Length = 163
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/157 (45%), Positives = 110/157 (70%), Gaps = 3/157 (1%)
Query: 17 KLDLKKIALHA-RNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAAR 75
+ DL + + + R AE P + + + M++ PK TA++F++GK+VCTGA++E K AAR
Sbjct: 2 RFDLTNLLVKSHRRAELVPKK-NCILMKLHNPKATAMLFANGKLVCTGAETEDAIKNAAR 60
Query: 76 KYARIVQKIGFP-VQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYR 134
++ +++QK+ FP V DFKIQN+VG+CD+ F + +E L H+ TYEPEL+P LIYR
Sbjct: 61 RFTQVIQKMDFPGVNLIDFKIQNVVGTCDMGFRVLVEALAFAHSDRCTYEPELYPALIYR 120
Query: 135 MKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPV 171
++KP V +L+F+SGKVV T +K ++Y+A I+PV
Sbjct: 121 LEKPQVKVLVFVSGKVVFTDSKEPRELYSACEAIFPV 157
>gi|158288977|ref|XP_310781.4| AGAP000335-PA [Anopheles gambiae str. PEST]
Length = 231
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 112/173 (64%), Gaps = 1/173 (0%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
VI N+V + ++ C L+L+ IAL+ N E+ VTM+++ P TTA I+SSGKI CTG
Sbjct: 58 VINNVVCSFSVRCHLNLRDIALYGDNVEFRREN-GMVTMKLRRPYTTASIWSSGKITCTG 116
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE QAK+AAR+Y+R +QK+GF V+ ++F+I N++G+C + + IK+ + + ++Y
Sbjct: 117 ATSEDQAKVAARRYSRCLQKLGFNVRLRNFRIVNVLGTCAMPWGIKIVNFSEKYKKDASY 176
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYV 176
EPEL PG+ Y++ P T+ IF +G + +TG R + A + I L ++
Sbjct: 177 EPELHPGVTYKLHSPRATLKIFSTGSITVTGKCVRRKGEAMWVQIAARLQFFL 229
>gi|348686462|gb|EGZ26277.1| hypothetical protein PHYSODRAFT_484921 [Phytophthora sojae]
Length = 161
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/157 (45%), Positives = 108/157 (68%), Gaps = 3/157 (1%)
Query: 17 KLDLKKIALHA-RNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAAR 75
+ DL + + + R AE P + + + M++ PK TA++F++GK+VCTGA++E K AR
Sbjct: 2 RFDLTNLLVKSHRRAELVPKK-NCILMKLHNPKATAMLFANGKLVCTGAETEEAIKNVAR 60
Query: 76 KYARIVQKIGFP-VQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYR 134
++ +++QK+ FP V DFKIQN+VG+CD+ F + +E + H+ TYEPEL+P LIYR
Sbjct: 61 RFTQVIQKMDFPGVNLIDFKIQNVVGTCDLGFRVLVEAIAFAHSDCCTYEPELYPALIYR 120
Query: 135 MKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPV 171
+ KP V +L+F+SGKVV T +K ++YAA IYPV
Sbjct: 121 LDKPQVKVLVFVSGKVVFTDSKEPRELYAACEAIYPV 157
>gi|241239027|ref|XP_002401459.1| TATA-box-binding protein, putative [Ixodes scapularis]
gi|215496181|gb|EEC05822.1| TATA-box-binding protein, putative [Ixodes scapularis]
Length = 316
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/169 (42%), Positives = 114/169 (67%), Gaps = 2/169 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
VI N+V + ++ C L+L++IAL A N EY +TM+I+ P TTA ++SSGK+ CTG
Sbjct: 74 VINNVVCSFSVRCHLNLRQIALTATNVEYRREN-GMLTMKIRAPYTTASMWSSGKVTCTG 132
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE AK+AAR+YARI+QK+GF V+F ++++ N++G+C + F IKL + + ++Y
Sbjct: 133 ATSEETAKMAARRYARILQKLGFRVKFMNYRVVNVLGTCTMPFAIKLIPFSQHNRGLASY 192
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPEL PG+ Y++K T+ IF +G + +T A + + A +I+P++
Sbjct: 193 EPELHPGVTYKIKDLKATLKIFSTGSITVT-APSVGNVQQAIEHIFPLV 240
>gi|189237795|ref|XP_972962.2| PREDICTED: similar to tata-box binding protein [Tribolium
castaneum]
gi|270007920|gb|EFA04368.1| hypothetical protein TcasGA2_TC014666 [Tribolium castaneum]
Length = 262
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 114/169 (67%), Gaps = 3/169 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+I N+V + ++ C L+L++IAL+ N EY +TM+++ P TTA I+SSGK+ CTG
Sbjct: 54 MINNVVCSFSVRCHLNLREIALNGINVEYRKEN-GKITMKLRRPYTTASIWSSGKVTCTG 112
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE QAK+AAR++AR +QK+GF V+F ++++ N++G+C + F IK+ + H + Y
Sbjct: 113 ATSELQAKIAARRFARCLQKLGFKVRFNNYRVVNVLGTCSMPFAIKINSFSERHKE-ADY 171
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPEL PG+ Y+++ P T+ IF +G V +T A + + AA I+P++
Sbjct: 172 EPELHPGVTYKLQSPKATLKIFSTGSVTVT-APSVADVQAAIEYIFPLV 219
>gi|394774083|gb|AFN37232.1| TATA-box binding protein [Aphis glycines]
Length = 149
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 65/88 (73%), Positives = 79/88 (89%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL C+LDLK IALHARNAE+NP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 62 PQLQNIVSTVNLGCRLDLKTIALHARNAEFNPKRFAAVIMRIREPRTTALIFSSGKMVCT 121
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQF 90
GAKSE ++LAARKYARI+QK+ FP +F
Sbjct: 122 GAKSEEDSRLAARKYARIIQKLSFPAKF 149
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 94 KIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVIT 153
++QNIV + ++ + L+ + HA + + P+ F +I R+++P T LIF SGK+V T
Sbjct: 63 QLQNIVSTVNLGCRLDLKTI-ALHARNAEFNPKRFAAVIMRIREPRTTALIFSSGKMVCT 121
Query: 154 GAKARE 159
GAK+ E
Sbjct: 122 GAKSEE 127
>gi|193875778|gb|ACF24525.1| TATA binding protein of TFIID [Gymnochlora stellata]
Length = 162
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 107/156 (68%), Gaps = 1/156 (0%)
Query: 18 LDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKY 77
LDLKK+AL A+N+EYNP RF A+ +R ++PK TALIF SGK+VCTG K+E++AK A+ K+
Sbjct: 1 LDLKKVALKAKNSEYNPKRFHALILRSRDPKATALIFKSGKMVCTGTKTETEAKEASLKF 60
Query: 78 ARIVQKIGFP-VQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMK 136
+++++ GF K++ ++N+V +CD PI L+ + + YEPE+FPGL++R
Sbjct: 61 LKVIKQAGFTKAMLKNYSVRNVVATCDYRSPINLDPIFFGYRDQCMYEPEIFPGLLFRPN 120
Query: 137 KPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
K + ++ F SGK+VITG + E++ N + +L
Sbjct: 121 KAKIVVIFFSSGKIVITGVNSMEKLNKIHNMVLKIL 156
>gi|119872319|ref|YP_930326.1| transcription factor [Pyrobaculum islandicum DSM 4184]
gi|166227824|sp|A1RSQ1.1|TBP_PYRIL RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|119673727|gb|ABL87983.1| TATA binding protein of transcription factor TFIID [Pyrobaculum
islandicum DSM 4184]
Length = 199
Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/168 (46%), Positives = 109/168 (64%), Gaps = 6/168 (3%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVAT+NL +LDL+K+A AEYNP +F + +R+ +P+ +ALIF +GK+VCTGA
Sbjct: 10 IENIVATVNLGVELDLEKLAERLAMAEYNPDQFPGLILRLTKPRISALIFRTGKMVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLER--LNGFHAMFS 121
K+E K A R ++++ G V F + ++QNIV S ++ + LE+ L +AM
Sbjct: 70 KNEEDLKNAVRALVKLLRDHGAEVPFDPEVQVQNIVASGNLHAEVDLEQAVLMLENAM-- 127
Query: 122 TYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIY 169
YEPE FPGLIYRM P V MLIF SGK+V TGAK+ + A +Y
Sbjct: 128 -YEPEQFPGLIYRMSSPRVVMLIFGSGKIVCTGAKSERDVATAVQKLY 174
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
+QNIVA+ NL ++DL++ L NA Y P +F + R+ P+ LIF SGKIVCTGA
Sbjct: 101 VQNIVASGNLHAEVDLEQAVLMLENAMYEPEQFPGLIYRMSSPRVVMLIFGSGKIVCTGA 160
Query: 65 KSESQAKLAARKYARIVQKIG 85
KSE A +K ++ +G
Sbjct: 161 KSERDVATAVQKLYNQLKDLG 181
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
++I+NIV + ++ + LE+L AM + Y P+ FPGLI R+ KP ++ LIF +GK+V
Sbjct: 8 YRIENIVATVNLGVELDLEKLAERLAM-AEYNPDQFPGLILRLTKPRISALIFRTGKMVC 66
Query: 153 TGAKAREQIYAAFNNIYPVL 172
TGAK E + A + +L
Sbjct: 67 TGAKNEEDLKNAVRALVKLL 86
>gi|390986539|gb|AFM35789.1| hypothetical protein, partial [Oryza eichingeri]
Length = 88
Score = 145 bits (367), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/88 (77%), Positives = 78/88 (88%)
Query: 36 RFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKI 95
RF+AV MRI+EPKTTALIF+SGK+VCTGAKSE +KLAARKYARIVQK+GFP +FKDFKI
Sbjct: 1 RFAAVIMRIREPKTTALIFASGKMVCTGAKSEDHSKLAARKYARIVQKLGFPAKFKDFKI 60
Query: 96 QNIVGSCDVEFPIKLERLNGFHAMFSTY 123
QNIVGSCDV+FPI+LE L H FS+Y
Sbjct: 61 QNIVGSCDVKFPIRLEGLAYSHGAFSSY 88
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 128 FPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQ 160
F +I R+++P T LIF SGK+V TGAK+ +
Sbjct: 2 FAAVIMRIREPKTTALIFASGKMVCTGAKSEDH 34
>gi|195355070|ref|XP_002044016.1| GM21561 [Drosophila sechellia]
gi|194129269|gb|EDW51312.1| GM21561 [Drosophila sechellia]
Length = 278
Score = 145 bits (367), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 107/165 (64%), Gaps = 4/165 (2%)
Query: 10 ATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQ 69
A ++ C L L+ IAL N EY VTM+++ P TTA I+SSG+I CTGA SES
Sbjct: 4 ARFSVGCHLKLRDIALQGSNVEYRREN-GMVTMKLRHPYTTASIWSSGRITCTGATSESM 62
Query: 70 AKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFP 129
AK+AAR+YAR + K+GFP +F +F+I N++G+C + + IK+ + H ++YEPEL P
Sbjct: 63 AKVAARRYARCLGKLGFPTRFLNFRIVNVLGTCSMPWAIKIVNFSERHRENASYEPELHP 122
Query: 130 GLIYRMKKPN--VTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
G+ Y+M+ P+ T+ IF +G V +T A + +A +IYP++
Sbjct: 123 GVTYKMRDPDPKATLKIFSTGSVTVTAASV-NHVESAIQHIYPLV 166
>gi|82596850|ref|XP_726432.1| transcription initiation factor TFIId [Plasmodium yoelii yoelii
17XNL]
gi|23481840|gb|EAA17997.1| transcription initiation factor tfiid [Plasmodium yoelii yoelii]
Length = 285
Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 115/172 (66%), Gaps = 4/172 (2%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I NI+++ NL+ ++DL+ +A+ ++AEYNPS+ + + +RI PK TALIF SG+I+ TG
Sbjct: 109 IHNIISSANLDTEIDLRLVAISIKSAEYNPSKINTLIIRINNPKCTALIFKSGRIMLTGT 168
Query: 65 KSESQAKLAARKYARIVQKI-GFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
K+++ + +K +I++ + ++ K+FKI+NI+ S + P++LE L H + Y
Sbjct: 169 KNKTDSIKGCKKIGKIIKLVTNQNIRLKNFKIENIIASANCNIPVRLEMLAHDHKEYCNY 228
Query: 124 EPELFPGLIYRMKKPN---VTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPELF GL+YR K + +LIF+SGK++ITG K+ +++ F +IY VL
Sbjct: 229 EPELFAGLVYRYKPTSNLKSVILIFVSGKIIITGCKSLQKLNTVFQDIYNVL 280
>gi|157136872|ref|XP_001663841.1| tata-box binding protein [Aedes aegypti]
gi|108869850|gb|EAT34075.1| AAEL013653-PA [Aedes aegypti]
Length = 584
Score = 145 bits (366), Expect = 7e-33, Method: Composition-based stats.
Identities = 70/169 (41%), Positives = 112/169 (66%), Gaps = 2/169 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
VI N+V + ++ C L+L+ IAL N E+ VTM+++ P TTA I+SSGKI CTG
Sbjct: 290 VINNVVCSFSVRCHLNLRDIALKGFNVEFRREN-GMVTMKLRRPYTTASIWSSGKITCTG 348
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE QAK+AAR+Y+R +QK+GF V+F++F+I N++G+C + + I + + + ++Y
Sbjct: 349 ATSEDQAKVAARRYSRCLQKLGFNVRFRNFRIVNVLGTCSMPWGIMIVNFSEKYKKDASY 408
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPEL PG+ Y++ P T+ IF +G + +T A + AA +I+P++
Sbjct: 409 EPELHPGVTYKLYNPKATLKIFSTGSITVTAASV-AFVQAAIEHIFPLV 456
>gi|429216623|ref|YP_007174613.1| TATA-box binding protein [Caldisphaera lagunensis DSM 15908]
gi|429133152|gb|AFZ70164.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Caldisphaera lagunensis DSM 15908]
Length = 209
Score = 145 bits (366), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 80/169 (47%), Positives = 105/169 (62%), Gaps = 2/169 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVAT+ L+ LDL I + +YNP +F + R++ PK TALIF SGK+V TGA
Sbjct: 31 IENIVATVILDTPLDLNLIETRIPDVDYNPDQFPGLVYRLQSPKITALIFKSGKMVVTGA 90
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KS Q A + + + G P+Q K +IQNIV S ++ + LE+ F S Y
Sbjct: 91 KSVKQLVWAVKTILKKLMIKGVPMQGKPQIQIQNIVASANLNVDVDLEKA-AFTLPKSMY 149
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPE FPGLIYRM+KP V +LIF SGK+VITGAK ++ A N IY +L
Sbjct: 150 EPEQFPGLIYRMEKPRVVLLIFSSGKMVITGAKRESEVQDAVNGIYNIL 198
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 94 KIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVIT 153
KI+NIV + ++ P+ L + Y P+ FPGL+YR++ P +T LIF SGK+V+T
Sbjct: 30 KIENIVATVILDTPLDLNLIET-RIPDVDYNPDQFPGLVYRLQSPKITALIFKSGKMVVT 88
Query: 154 GAKAREQIYAAFNNI 168
GAK+ +Q+ A I
Sbjct: 89 GAKSVKQLVWAVKTI 103
>gi|348523966|ref|XP_003449494.1| PREDICTED: TATA box-binding protein-like protein 2-like
[Oreochromis niloticus]
Length = 319
Score = 145 bits (366), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 107/175 (61%), Gaps = 2/175 (1%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ PVI N+++T++L C LDLK IA N EY P F+ + RI+EP+ T IF SGKI+
Sbjct: 119 LVPVICNVISTVDLGCSLDLKFIARRMWNVEYKPQTFTGIIARIREPEATVTIFQSGKII 178
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
G KS +++LAARK+AR +QK GFPV+F +FKIQNIV C FP+ L L H
Sbjct: 179 SLGTKSVEESRLAARKFARKLQKFGFPVRFLNFKIQNIVAFCQT-FPVDLAELQKVHRGQ 237
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
+YEPE++ GL+ + + + +F +G + + GAK ++ F I +L Y
Sbjct: 238 CSYEPEMYNGLVLD-QITGIRVSLFSTGYINVFGAKTWAEVNEVFKTICRILREY 291
>gi|327400113|ref|YP_004340952.1| TATA-box-binding protein [Archaeoglobus veneficus SNP6]
gi|327315621|gb|AEA46237.1| TATA-box-binding protein [Archaeoglobus veneficus SNP6]
Length = 184
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 102/166 (61%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +DL KIA ++AEY P +F + +R KEPK ALIF SGK+VCTG+
Sbjct: 9 IENVVASTQIGENIDLNKIAKEVKDAEYKPKQFPGLVLRTKEPKAAALIFRSGKVVCTGS 68
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS A A R+ +I+ ++G PV + + K+QNIV S D+ + L + G
Sbjct: 69 KSVEDANRAVRQVVKIISELGIPVILEPEVKVQNIVASADLGVDLNLNAIAIGLGLENIE 128
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ KP V +LIF SGK+V+TG K E A I
Sbjct: 129 YEPEQFPGLVYRLDKPRVVVLIFGSGKMVVTGGKNPEDAVKAVERI 174
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIVA+ +L L+L IA L N EY P +F + R+ +P+ LIF SGK+V T
Sbjct: 100 VQNIVASADLGVDLNLNAIAIGLGLENIEYEPEQFPGLVYRLDKPRVVVLIFGSGKMVVT 159
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
G K+ A A + A + +G
Sbjct: 160 GGKNPEDAVKAVERIAEELSALGL 183
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 91 KDFKI--QNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSG 148
KD+KI +N+V S + I L ++ + Y+P+ FPGL+ R K+P LIF SG
Sbjct: 3 KDYKIKIENVVASTQIGENIDLNKI-AKEVKDAEYKPKQFPGLVLRTKEPKAAALIFRSG 61
Query: 149 KVVITGAKAREQIYAAFNNIYPVLN 173
KVV TG+K+ E A + +++
Sbjct: 62 KVVCTGSKSVEDANRAVRQVVKIIS 86
>gi|357625409|gb|EHJ75865.1| tata-box binding protein [Danaus plexippus]
Length = 314
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 116/171 (67%), Gaps = 7/171 (4%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+I N+V + +++C L+L++IAL+ N E+ VTM+++ P TTA I+SSG++ CTG
Sbjct: 90 MINNVVCSFSVKCHLNLRQIALNGVNVEFRREN-GMVTMKLRRPYTTASIWSSGRVTCTG 148
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF--S 121
A SE QAK+AAR+YAR +QK+GF V+F++F++ N++G+C + F I R+ F + +
Sbjct: 149 ATSEDQAKVAARRYARALQKLGFQVRFRNFRVVNVLGTCRMPFGI---RIIAFSKKYKEA 205
Query: 122 TYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPEL PG+ Y++ P T+ IF +G V IT A++ + +A I+P++
Sbjct: 206 DYEPELHPGVTYKLYNPKATLKIFSTGGVTIT-ARSVSDVQSAVERIFPLV 255
>gi|302347997|ref|YP_003815635.1| TATA-box-binding protein [Acidilobus saccharovorans 345-15]
gi|302328409|gb|ADL18604.1| TATA-box-binding protein [Acidilobus saccharovorans 345-15]
Length = 207
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/170 (46%), Positives = 105/170 (61%), Gaps = 2/170 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVAT+ LE LDL I + +YNP +F + R++ PK TAL+F SGK+V TGA
Sbjct: 33 IENIVATVILENTLDLNLIEARIPDVDYNPDQFPGLVYRLQSPKITALVFKSGKMVVTGA 92
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KS Q A + + G +Q + +IQNIV S ++ + LE+ F S Y
Sbjct: 93 KSVKQLVWAVKAILKKFITKGIVIQGRPQIQIQNIVASANLNVVVDLEKA-AFVLPHSMY 151
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
EPE FPGLI+RM KP V +LIF SGK+VITGAK ++Y A NNIY +L+
Sbjct: 152 EPEQFPGLIFRMDKPRVVLLIFSSGKMVITGAKRENEVYEAVNNIYKILD 201
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 48/79 (60%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQNIVA+ NL +DL+K A ++ Y P +F + R+ +P+ LIFSSGK+V TGA
Sbjct: 124 IQNIVASANLNVVVDLEKAAFVLPHSMYEPEQFPGLIFRMDKPRVVLLIFSSGKMVITGA 183
Query: 65 KSESQAKLAARKYARIVQK 83
K E++ A +I+ +
Sbjct: 184 KRENEVYEAVNNIYKILDE 202
>gi|18313147|ref|NP_559814.1| transcription factor [Pyrobaculum aerophilum str. IM2]
gi|24638239|sp|Q8ZVR0.1|TBP_PYRAE RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|18160658|gb|AAL63996.1| transcription initiation factor TFIID (TATA-binding) [Pyrobaculum
aerophilum str. IM2]
Length = 199
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/168 (45%), Positives = 110/168 (65%), Gaps = 6/168 (3%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVAT+NL +LDL+++A AEYNP +F + +R+ +P+ +ALIF +GK+VCTGA
Sbjct: 10 IENIVATVNLGVELDLEQLAERLTMAEYNPDQFPGLILRLTKPRISALIFRTGKMVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLER--LNGFHAMFS 121
K+E K A R ++++ G V F + +IQNIV S ++ + LE+ L +AM
Sbjct: 70 KNEEDLKNAVRALVKLLKDHGADVPFDPEVQIQNIVASGNLHAEVDLEQAVLMLENAM-- 127
Query: 122 TYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIY 169
YEPE FPGLIYRM P V +LIF SGK+V TGAK+ + + A +Y
Sbjct: 128 -YEPEQFPGLIYRMSSPRVVILIFGSGKIVCTGAKSEKDVATAVQKLY 174
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 50/81 (61%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQNIVA+ NL ++DL++ L NA Y P +F + R+ P+ LIF SGKIVCTGA
Sbjct: 101 IQNIVASGNLHAEVDLEQAVLMLENAMYEPEQFPGLIYRMSSPRVVILIFGSGKIVCTGA 160
Query: 65 KSESQAKLAARKYARIVQKIG 85
KSE A +K ++++G
Sbjct: 161 KSEKDVATAVQKLYNQLKELG 181
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
++I+NIV + ++ + LE+L M + Y P+ FPGLI R+ KP ++ LIF +GK+V
Sbjct: 8 YRIENIVATVNLGVELDLEQLAERLTM-AEYNPDQFPGLILRLTKPRISALIFRTGKMVC 66
Query: 153 TGAKAREQIYAAFNNIYPVL 172
TGAK E + A + +L
Sbjct: 67 TGAKNEEDLKNAVRALVKLL 86
>gi|126466212|ref|YP_001041321.1| transcription factor [Staphylothermus marinus F1]
gi|126015035|gb|ABN70413.1| TATA binding protein of transcription factor TFIID [Staphylothermus
marinus F1]
Length = 196
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/165 (47%), Positives = 105/165 (63%), Gaps = 2/165 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVAT+ L+ LDL I N Y P +F + +R+++PKTTALIF SGK+V TGA
Sbjct: 17 IENIVATVILDQSLDLNLIESRVPNVSYQPDQFPGLILRLEKPKTTALIFKSGKMVVTGA 76
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KS Q A +K ++++K G + K +IQNIV S D+ I LER + S Y
Sbjct: 77 KSTQQLIDAVKKIIKLLRKYGIKIVSKPRIQIQNIVASGDINAYINLER-AAYLLEDSMY 135
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
EPE FPGLI+RM++P V +LIF SGK+VITGAK ++ A NI
Sbjct: 136 EPEQFPGLIHRMREPRVVLLIFSSGKMVITGAKEESEVETAVRNI 180
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 48/74 (64%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQNIVA+ ++ ++L++ A ++ Y P +F + R++EP+ LIFSSGK+V TGA
Sbjct: 108 IQNIVASGDINAYINLERAAYLLEDSMYEPEQFPGLIHRMREPRVVLLIFSSGKMVITGA 167
Query: 65 KSESQAKLAARKYA 78
K ES+ + A R A
Sbjct: 168 KEESEVETAVRNIA 181
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 94 KIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVIT 153
KI+NIV + ++ + L + S Y+P+ FPGLI R++KP T LIF SGK+V+T
Sbjct: 16 KIENIVATVILDQSLDLNLIESRVPNVS-YQPDQFPGLILRLEKPKTTALIFKSGKMVVT 74
Query: 154 GAKAREQIYAAFNNIYPVLNVY 175
GAK+ +Q+ A I +L Y
Sbjct: 75 GAKSTQQLIDAVKKIIKLLRKY 96
>gi|171185805|ref|YP_001794724.1| transcription factor [Pyrobaculum neutrophilum V24Sta]
gi|226703562|sp|B1Y949.1|TBP_THENV RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|170935017|gb|ACB40278.1| 2-alkenal reductase [Pyrobaculum neutrophilum V24Sta]
Length = 197
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/168 (46%), Positives = 110/168 (65%), Gaps = 6/168 (3%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVAT+NL +LDL+K+A AEYNP +F + +R+ +P+ +ALIF +GK+VCTGA
Sbjct: 10 IENIVATVNLGVELDLEKLAERLTMAEYNPDQFPGLILRLTKPRISALIFRTGKMVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLER--LNGFHAMFS 121
K+E K A R ++++ G V F + +IQNIV S ++ + LE+ L +AM
Sbjct: 70 KNEEDLKNAVRALVKLLKDHGADVPFDPEVQIQNIVASGNLFAEVDLEQAVLMLENAM-- 127
Query: 122 TYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIY 169
YEPE FPGLIYRM P V +LIF SGK+V TGAK+ + + A +Y
Sbjct: 128 -YEPEQFPGLIYRMSSPRVVILIFGSGKIVCTGAKSEKDVATAVQKLY 174
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 49/81 (60%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQNIVA+ NL ++DL++ L NA Y P +F + R+ P+ LIF SGKIVCTGA
Sbjct: 101 IQNIVASGNLFAEVDLEQAVLMLENAMYEPEQFPGLIYRMSSPRVVILIFGSGKIVCTGA 160
Query: 65 KSESQAKLAARKYARIVQKIG 85
KSE A +K ++ +G
Sbjct: 161 KSEKDVATAVQKLYNQLKDLG 181
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
++I+NIV + ++ + LE+L M + Y P+ FPGLI R+ KP ++ LIF +GK+V
Sbjct: 8 YRIENIVATVNLGVELDLEKLAERLTM-AEYNPDQFPGLILRLTKPRISALIFRTGKMVC 66
Query: 153 TGAKAREQIYAAFNNIYPVL 172
TGAK E + A + +L
Sbjct: 67 TGAKNEEDLKNAVRALVKLL 86
>gi|126459691|ref|YP_001055969.1| transcription factor [Pyrobaculum calidifontis JCM 11548]
gi|166227823|sp|A3MV36.1|TBP_PYRCJ RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|126249412|gb|ABO08503.1| TATA binding protein of transcription factor TFIID [Pyrobaculum
calidifontis JCM 11548]
Length = 199
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 106/166 (63%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVAT+NL +LDL+ +A AEYNP +F + +R+ +P+ +ALIF +GK+VCTGA
Sbjct: 10 IENIVATVNLGVELDLESLAERLPMAEYNPDQFPGLILRLTKPRISALIFRTGKMVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
K+E K A R +++ G V F + +IQNIV S ++ + LE+ F + Y
Sbjct: 70 KNEEDLKNAVRALVKLLNDHGAEVPFDPEVQIQNIVASGNLHAEVDLEQAV-FMLENAMY 128
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIY 169
EPE FPGLIYRM P V +LIF SGK+V TGAK+ + + A +Y
Sbjct: 129 EPEQFPGLIYRMSSPRVVILIFGSGKIVCTGAKSEKDVATAVQKLY 174
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQNIVA+ NL ++DL++ NA Y P +F + R+ P+ LIF SGKIVCTGA
Sbjct: 101 IQNIVASGNLHAEVDLEQAVFMLENAMYEPEQFPGLIYRMSSPRVVILIFGSGKIVCTGA 160
Query: 65 KSESQAKLAARKYARIVQKIG 85
KSE A +K ++++G
Sbjct: 161 KSEKDVATAVQKLYNQLKELG 181
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
++I+NIV + ++ + LE L M + Y P+ FPGLI R+ KP ++ LIF +GK+V
Sbjct: 8 YRIENIVATVNLGVELDLESLAERLPM-AEYNPDQFPGLILRLTKPRISALIFRTGKMVC 66
Query: 153 TGAKAREQIYAAFNNIYPVLN 173
TGAK E + A + +LN
Sbjct: 67 TGAKNEEDLKNAVRALVKLLN 87
>gi|392522721|gb|AFM78149.1| TATA box-binding protein, partial [uncultured diatom]
Length = 114
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 67/113 (59%), Positives = 87/113 (76%), Gaps = 1/113 (0%)
Query: 36 RFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGF-PVQFKDFK 94
RF+AV MR++EP+ TALIFSSG++V TG KS + LA RK+A I++++GF P DFK
Sbjct: 2 RFAAVIMRLREPRATALIFSSGRMVVTGTKSTHNSALATRKFAYILERVGFQPAGMLDFK 61
Query: 95 IQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLS 147
+QNIVG+ DV FPI+LE L H FS+YEPELFPGLIYR+ +P V +LIF+S
Sbjct: 62 VQNIVGTVDVGFPIRLEGLVFAHPTFSSYEPELFPGLIYRLVQPRVVLLIFVS 114
>gi|297527104|ref|YP_003669128.1| TATA-box binding family protein [Staphylothermus hellenicus DSM
12710]
gi|297256020|gb|ADI32229.1| TATA-box binding family protein [Staphylothermus hellenicus DSM
12710]
Length = 196
Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 78/165 (47%), Positives = 105/165 (63%), Gaps = 2/165 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVAT+ ++ LDL I N Y P +F + +R+++PKTTALIF SGK+V TGA
Sbjct: 17 IENIVATVIIDQSLDLNLIESRVPNVSYQPDQFPGLILRLEKPKTTALIFKSGKMVVTGA 76
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KS Q A +K ++++K G + K +IQNIV S D+ I LER + S Y
Sbjct: 77 KSTQQLIDAVKKIIKLLRKYGIKIVSKPRIQIQNIVASGDINAYINLER-AAYLLEDSMY 135
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
EPE FPGLI+RM++P V +LIF SGK+VITGAK ++ A NI
Sbjct: 136 EPEQFPGLIHRMREPRVVLLIFSSGKMVITGAKEESEVEMAVRNI 180
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 49/74 (66%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQNIVA+ ++ ++L++ A ++ Y P +F + R++EP+ LIFSSGK+V TGA
Sbjct: 108 IQNIVASGDINAYINLERAAYLLEDSMYEPEQFPGLIHRMREPRVVLLIFSSGKMVITGA 167
Query: 65 KSESQAKLAARKYA 78
K ES+ ++A R A
Sbjct: 168 KEESEVEMAVRNIA 181
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 94 KIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVIT 153
KI+NIV + ++ + L + S Y+P+ FPGLI R++KP T LIF SGK+V+T
Sbjct: 16 KIENIVATVIIDQSLDLNLIESRVPNVS-YQPDQFPGLILRLEKPKTTALIFKSGKMVVT 74
Query: 154 GAKAREQIYAAFNNIYPVLNVY 175
GAK+ +Q+ A I +L Y
Sbjct: 75 GAKSTQQLIDAVKKIIKLLRKY 96
>gi|14423938|sp|P58177.1|TBP_PYROC RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|13752554|gb|AAK38723.1|AF367981_1 TATA-binding protein [Pyrodictium occultum]
Length = 199
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 102/166 (61%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVAT++L+ LDL I EYNP +F + R+ PK TALIF SGK+V TGA
Sbjct: 23 IENIVATVSLDQTLDLNLIERSILTVEYNPEQFPGLVYRLDSPKVTALIFKSGKMVVTGA 82
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KS A +K R ++K G + + +IQNIV S ++ + LER S Y
Sbjct: 83 KSTRDLIEAVKKIVRNLKKHGIQIYGRPKVQIQNIVASANLNVCVDLERA-ALTLENSMY 141
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIY 169
EPE FPGLI+RM +P V +LIF SGK+VITGAK E++Y A N IY
Sbjct: 142 EPEQFPGLIHRMDEPRVVLLIFSSGKMVITGAKREEEVYEAVNKIY 187
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 49/80 (61%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQNIVA+ NL +DL++ AL N+ Y P +F + R+ EP+ LIFSSGK+V TGA
Sbjct: 114 IQNIVASANLNVCVDLERAALTLENSMYEPEQFPGLIHRMDEPRVVLLIFSSGKMVITGA 173
Query: 65 KSESQAKLAARKYARIVQKI 84
K E + A K ++K+
Sbjct: 174 KREEEVYEAVNKIYEKLKKL 193
>gi|392522653|gb|AFM78115.1| TATA box-binding protein, partial [Skeletonema costatum]
Length = 114
Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 66/113 (58%), Positives = 87/113 (76%), Gaps = 1/113 (0%)
Query: 36 RFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGF-PVQFKDFK 94
RF+AV MR++EP+ TALIF+SG++V TG KS + LA RK+A I++++GF P DFK
Sbjct: 2 RFAAVIMRLREPRATALIFASGRMVVTGTKSTHNSALATRKFAYILERVGFQPAGMLDFK 61
Query: 95 IQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLS 147
+QNIVG+ DV FPI+LE L H FS+YEPELFPGLIYR+ +P V +LIF+S
Sbjct: 62 VQNIVGTVDVGFPIRLEGLVYAHPTFSSYEPELFPGLIYRLVQPRVVLLIFVS 114
>gi|347523992|ref|YP_004781562.1| TATA-box binding family protein [Pyrolobus fumarii 1A]
gi|343460874|gb|AEM39310.1| TATA-box binding family protein [Pyrolobus fumarii 1A]
Length = 207
Score = 141 bits (356), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 80/169 (47%), Positives = 104/169 (61%), Gaps = 2/169 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVAT+ L+ LDL I N EYNP +F + R++EPK TALIF SGK+V TGA
Sbjct: 28 IENIVATVTLDQNLDLYAIETSIPNVEYNPEQFPGLVFRLEEPKVTALIFKSGKMVVTGA 87
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KS Q A +K R +++ G + + +IQNIV S ++ + LE+ S Y
Sbjct: 88 KSTQQLIEAVKKIIRELKRHGIVIVGRPKVQIQNIVASANLNVCVDLEKA-ALTLENSMY 146
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPE FPGLIYRM+ P V +LIF SGK+VITGAK E++ A NI L
Sbjct: 147 EPEQFPGLIYRMQNPRVVLLIFSSGKMVITGAKREEEVKEAVYNIRDTL 195
>gi|410916287|ref|XP_003971618.1| PREDICTED: TATA box-binding protein-like protein 1-like [Takifugu
rubripes]
Length = 185
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 105/170 (61%), Gaps = 2/170 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+I N+VAT C+LDL I +N Y P + VTM++++P+ TA I++SGK++C G
Sbjct: 12 IISNVVATFTTGCRLDLHTIGSKGKNVIYKPKQ-GTVTMQLRKPRITANIWASGKVICIG 70
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE+ AKL AR+ AR +QK+GF V F FK+ N++ +C + F I L + +TY
Sbjct: 71 ASSEADAKLGARRIARCLQKLGFGVTFGTFKVVNVMATCSMPFKISLVDFTMMNRFRATY 130
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
EPEL P +Y MK+P T+ + +G V I A + + AA ++YP+L+
Sbjct: 131 EPELHPAALYTMKEPKATIKAYATGSVTIL-APSMGNVAAAVQHVYPLLS 179
>gi|159041771|ref|YP_001541023.1| transcription factor [Caldivirga maquilingensis IC-167]
gi|157920606|gb|ABW02033.1| 2-alkenal reductase [Caldivirga maquilingensis IC-167]
Length = 194
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 104/169 (61%), Gaps = 2/169 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVAT+NL LDL+++A AEYNP +F + +R + PK +ALIF +GK+VCTGA
Sbjct: 9 IENIVATVNLGVDLDLERLAEVLPAAEYNPDQFPGLILRFQRPKISALIFRTGKMVCTGA 68
Query: 65 KSESQAKLAARKYARIVQKIGFPVQ-FKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KSE + K A + + + + G +Q D ++QNIV S ++ + +E+ S Y
Sbjct: 69 KSEDELKRAVKYLVKTLNQRGAQIQNDSDIQVQNIVASGNLHAEVNIEKA-ALLLENSMY 127
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPE FPGLIYRM P V +L+F SGK+V TGAK + A +Y L
Sbjct: 128 EPEQFPGLIYRMSDPKVVILVFSSGKIVCTGAKKEADVAVAVRKLYDKL 176
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
++I+NIV + ++ + LERL + Y P+ FPGLI R ++P ++ LIF +GK+V
Sbjct: 7 YRIENIVATVNLGVDLDLERLAEVLPA-AEYNPDQFPGLILRFQRPKISALIFRTGKMVC 65
Query: 153 TGAKAREQIYAAFNNIYPVLN 173
TGAK+ +++ A + LN
Sbjct: 66 TGAKSEDELKRAVKYLVKTLN 86
>gi|443686931|gb|ELT90049.1| hypothetical protein CAPTEDRAFT_75203, partial [Capitella teleta]
Length = 196
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 108/172 (62%), Gaps = 2/172 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
VI N+V + + C L+LK+IA + Y P V+M++++P TTA I+SSG I TG
Sbjct: 25 VINNVVCSFSTRCHLNLKRIAREGNHVIYKPEN-GMVSMKLRKPYTTANIWSSGSITATG 83
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
+ SE AK+AAR+Y RI+QK+GF V+F +++ N++G+C + F I++ + H +Y
Sbjct: 84 STSEVDAKIAARRYCRILQKMGFRVRFGRYRVVNVLGTCSLPFGIRISQFAQDHHKQCSY 143
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
EPEL PG Y M +P T+ +F +G + +T + E + A N+I+P++ Y
Sbjct: 144 EPELHPGATYTMMEPRATLKLFTTGSITVTAPRV-ENVKLAINHIWPLVFKY 194
>gi|315427150|dbj|BAJ48765.1| transcription initiation factor TFIID TATA-box-binding protein
[Candidatus Caldiarchaeum subterraneum]
gi|315427168|dbj|BAJ48782.1| transcription initiation factor TFIID TATA-box-binding protein
[Candidatus Caldiarchaeum subterraneum]
gi|343485784|dbj|BAJ51438.1| transcription initiation factor TFIID TATA-box-binding protein
[Candidatus Caldiarchaeum subterraneum]
Length = 187
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 110/178 (61%), Gaps = 4/178 (2%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+V+++ L KLDL +I + EY P++F + R+ +PKT LIFSSGK+VCTGA
Sbjct: 11 IQNVVSSVTLFQKLDLAQIQRTFPDVEYKPAQFPGLVFRLAKPKTATLIFSSGKMVCTGA 70
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KSE ++ A R + ++K GF ++ + +IQNIV S D+ I LER Y
Sbjct: 71 KSEEESIRAVRTVVKALKKEGFVIREEPQIEIQNIVASIDLHGRIDLER-AATTLENVMY 129
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN--VYVTYD 179
EPE FPGLIYRM P V +L+F SGK+V TGAK + +Y A N + +L ++YD
Sbjct: 130 EPEQFPGLIYRMNSPKVVILMFASGKLVCTGAKYEKDVYDAVNKLQQLLEEKELISYD 187
>gi|123395858|ref|XP_001300812.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121881909|gb|EAX87882.1| hypothetical protein TVAG_285070 [Trichomonas vaginalis G3]
Length = 233
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 108/176 (61%), Gaps = 6/176 (3%)
Query: 1 MAPVIQNIVATINLEC-KLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKI 59
+ P + N++A C KL+L IA RNAEY P R AV +RI++PK T L+FS+GKI
Sbjct: 47 LKPKVVNVIALAQYSCNKLNLVSIASTIRNAEYKPKRIKAVVIRIRDPKATGLVFSNGKI 106
Query: 60 VCTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERL---NGF 116
G +S AK AA K+ +++Q+IG+ V+ + I +IV + F I + ++ +G
Sbjct: 107 NIVGCRSVEDAKRAAHKFRKMLQQIGYDVKLVNITISSIVATIHTPFNIAIAQIASADG- 165
Query: 117 HAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
H +F Y PE F GLIYR+ P TMLIF SG +V+T AK+ + + A N IYPVL
Sbjct: 166 HKLFCQYRPEKFAGLIYRLTDPQCTMLIFQSGSIVLT-AKSEDDLTAGSNWIYPVL 220
>gi|392522763|gb|AFM78170.1| TATA box-binding protein, partial [uncultured diatom]
Length = 113
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/112 (57%), Positives = 86/112 (76%)
Query: 36 RFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKI 95
RF+AV MR++EP+ TALIF+SGK+ TG KS + LAA+++A I++K+GF DFK+
Sbjct: 2 RFAAVIMRLREPRATALIFASGKMCVTGTKSTHNSSLAAKRFAYIIEKVGFKSTGLDFKV 61
Query: 96 QNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLS 147
QNIVG+ DV FP++LE L H+M+S+YEPELFPGLIYR+ P V LIF+S
Sbjct: 62 QNIVGTVDVGFPVRLEGLVYAHSMYSSYEPELFPGLIYRLGIPRVVFLIFVS 113
>gi|392522723|gb|AFM78150.1| TATA box-binding protein, partial [uncultured diatom]
Length = 114
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/113 (58%), Positives = 87/113 (76%), Gaps = 1/113 (0%)
Query: 36 RFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGFPVQ-FKDFK 94
RF+AV MR++EP+ TALIFSSG++V TG KS + LA RK+A I++++GF + DFK
Sbjct: 2 RFAAVIMRLREPRATALIFSSGRMVVTGTKSTHNSALATRKFAYILERVGFQLAGMLDFK 61
Query: 95 IQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLS 147
+QNIVG+ DV FPI+LE L H FS+YEPELFPGLIYR+ +P V +LIF+S
Sbjct: 62 VQNIVGTVDVGFPIRLEGLVFAHPTFSSYEPELFPGLIYRLVQPRVVLLIFVS 114
>gi|392522767|gb|AFM78172.1| TATA box-binding protein, partial [uncultured diatom]
Length = 114
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/113 (58%), Positives = 89/113 (78%), Gaps = 1/113 (0%)
Query: 36 RFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGFPVQFK-DFK 94
RF+AVTMR++EP+ TALIF+SGK+ TG KS A LA++K+A I++K+GF + DFK
Sbjct: 2 RFAAVTMRLREPRATALIFASGKMCATGTKSTHNASLASKKFALIIEKVGFKTAPEVDFK 61
Query: 95 IQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLS 147
+QNIVG+ DV FPI+LE L H+ F++YEPELFPGLIYR+ +P V +LIF+S
Sbjct: 62 VQNIVGTADVGFPIRLEGLVYAHSTFASYEPELFPGLIYRLVQPRVVILIFVS 114
>gi|305663395|ref|YP_003859683.1| TATA binding protein of transcription factor TFIID [Ignisphaera
aggregans DSM 17230]
gi|304377964|gb|ADM27803.1| TATA binding protein of transcription factor TFIID [Ignisphaera
aggregans DSM 17230]
Length = 218
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 107/166 (64%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVAT++++ +DL + N EY+P +F + R++ PK TALIF SG++V TGA
Sbjct: 12 IENIVATVSVDQTIDLDYLDKVLPNVEYDPDQFPGLVFRLESPKVTALIFRSGRMVVTGA 71
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KS + A ++ R + K P+ K +IQNIV S ++ I LE++ F + Y
Sbjct: 72 KSTADLIKAVKRIVRTLLKYDIPITSKPRIQIQNIVASANLGSEIMLEKV-AFLLENTMY 130
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIY 169
EPE FPGLIYRM P+V +L+F SGK+VITGAK+ E+++ A N+Y
Sbjct: 131 EPEQFPGLIYRMTDPHVVLLVFSSGKMVITGAKSEEEVFQAVRNLY 176
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQNIVA+ NL ++ L+K+A N Y P +F + R+ +P L+FSSGK+V TGA
Sbjct: 103 IQNIVASANLGSEIMLEKVAFLLENTMYEPEQFPGLIYRMTDPHVVLLVFSSGKMVITGA 162
Query: 65 KSESQAKLAARKYARIVQKIG 85
KSE + A R ++++G
Sbjct: 163 KSEEEVFQAVRNLYLKLKELG 183
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 94 KIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVIT 153
KI+NIV + V+ I L+ L+ Y+P+ FPGL++R++ P VT LIF SG++V+T
Sbjct: 11 KIENIVATVSVDQTIDLDYLDKVLPNVE-YDPDQFPGLVFRLESPKVTALIFRSGRMVVT 69
Query: 154 GAKAREQIYAAFNNIYPVLNVY 175
GAK+ + A I L Y
Sbjct: 70 GAKSTADLIKAVKRIVRTLLKY 91
>gi|410916461|ref|XP_003971705.1| PREDICTED: TATA box-binding protein-like protein 1-like [Takifugu
rubripes]
Length = 185
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 108/170 (63%), Gaps = 2/170 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+I N+VAT C+L+L I +N YN +R VTM++++P+ TA I++SGK++C G
Sbjct: 12 IICNVVATFRTGCRLNLHTIGSKGKNVIYN-TRRGKVTMQLRKPRITASIWASGKVICIG 70
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE +AKL AR+ AR +QK+GF V+F FK+ N++ C + F I L + +TY
Sbjct: 71 ASSEDEAKLGARRIARCLQKLGFKVKFSAFKVVNVMAGCSMPFKISLIDFTKKNRPIATY 130
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
EPEL+P +Y M++P T+ +F +G V I A + + AA ++YP+L+
Sbjct: 131 EPELYPAAMYTMRQPKATIKVFSTGSVTIL-APSVVNVAAAVQHVYPLLS 179
>gi|145591042|ref|YP_001153044.1| transcription factor [Pyrobaculum arsenaticum DSM 13514]
gi|379004488|ref|YP_005260160.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Pyrobaculum oguniense TE7]
gi|145282810|gb|ABP50392.1| TATA binding protein of transcription factor TFIID [Pyrobaculum
arsenaticum DSM 13514]
gi|375159941|gb|AFA39553.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Pyrobaculum oguniense TE7]
Length = 201
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/168 (44%), Positives = 108/168 (64%), Gaps = 6/168 (3%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVAT+NL+ +LDL+ +A AEYNP +F + +R+ +P+ +ALIF +GK+V TGA
Sbjct: 10 IENIVATVNLQVELDLEMLAERLAMAEYNPDQFPGLILRLTKPRISALIFRTGKMVATGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLER--LNGFHAMFS 121
K+E K A R ++++ G V F + ++QNIV S ++ + LE+ L +AM
Sbjct: 70 KNEEDLKNAVRALVKLLKDHGADVPFDPEVQVQNIVASGNLHAEVDLEQAVLMLENAM-- 127
Query: 122 TYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIY 169
YEPE FPGLIYRM P V +LIF SGK+V TGAK+ + A +Y
Sbjct: 128 -YEPEQFPGLIYRMTNPRVVILIFGSGKIVCTGAKSERDVATAVQKLY 174
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 50/81 (61%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
+QNIVA+ NL ++DL++ L NA Y P +F + R+ P+ LIF SGKIVCTGA
Sbjct: 101 VQNIVASGNLHAEVDLEQAVLMLENAMYEPEQFPGLIYRMTNPRVVILIFGSGKIVCTGA 160
Query: 65 KSESQAKLAARKYARIVQKIG 85
KSE A +K ++++G
Sbjct: 161 KSERDVATAVQKLYNQLKELG 181
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
++I+NIV + +++ + LE L AM + Y P+ FPGLI R+ KP ++ LIF +GK+V
Sbjct: 8 YRIENIVATVNLQVELDLEMLAERLAM-AEYNPDQFPGLILRLTKPRISALIFRTGKMVA 66
Query: 153 TGAKAREQIYAAFNNIYPVL 172
TGAK E + A + +L
Sbjct: 67 TGAKNEEDLKNAVRALVKLL 86
>gi|170035005|ref|XP_001845362.1| TATA-box-binding protein [Culex quinquefasciatus]
gi|167876820|gb|EDS40203.1| TATA-box-binding protein [Culex quinquefasciatus]
Length = 429
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 101/151 (66%), Gaps = 1/151 (0%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
VI N+V + ++ C L+L+ IA N E+ VTM+++ P TTA I+SSGKI CTG
Sbjct: 265 VINNVVCSFSVRCHLNLRDIAQKGFNVEFRREN-GMVTMKLRRPYTTASIWSSGKITCTG 323
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE AK+AAR+Y+R +QK+GF V+F++F+I N++G+C + + I + + + ++Y
Sbjct: 324 ATSEDSAKVAARRYSRCLQKLGFNVRFRNFRIVNVLGTCSMPWGIMIVNFSEKYKKDASY 383
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITG 154
EPEL PG+ Y++ P T+ IF +G + +TG
Sbjct: 384 EPELHPGVTYKLYNPKATLKIFSTGSITVTG 414
>gi|82179859|sp|Q5U385.1|TBPL1_DANRE RecName: Full=TATA box-binding protein-like protein 1;
Short=TBP-like protein 1; AltName: Full=TATA box-binding
protein-related factor 2; Short=TBP-related factor 2;
AltName: Full=TBP-like factor
gi|55250384|gb|AAH85661.1| TBP-like 1 [Danio rerio]
Length = 186
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 103/169 (60%), Gaps = 2/169 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
++ N+V+ C L+L+ I L N Y P V M++++P+ TA I+SSGKI+CTG
Sbjct: 12 IVTNVVSVFRTRCHLNLRTIGLEGTNVIYKPE-VGKVLMKLRKPRITASIWSSGKIICTG 70
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE +AKL AR+ AR +QK+GF V+F DFK+ N++ C + F I+L + ++Y
Sbjct: 71 ATSEEEAKLGARRLARCLQKMGFKVRFSDFKVVNVLAVCSMPFQIRLIEFTKNNRPIASY 130
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPEL P YR+K T+ +F +G + +TG + + +A IYP+L
Sbjct: 131 EPELHPAASYRIKNLRSTVQVFSTGNITVTGPNV-QSVASAVEEIYPLL 178
>gi|148224606|ref|NP_001083732.1| TATA box-binding protein-like protein 1 [Xenopus laevis]
gi|25091422|sp|Q9W6Z2.1|TBPL1_XENLA RecName: Full=TATA box-binding protein-like protein 1;
Short=TBP-like protein 1; AltName: Full=TATA box-binding
protein-related factor 2; Short=TBP-related factor 2;
AltName: Full=TBP-like factor; Short=xlTLF
gi|4689078|emb|CAB41487.1| TBP-like factor [Xenopus laevis]
gi|58702024|gb|AAH90226.1| TLF protein [Xenopus laevis]
Length = 186
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 103/167 (61%), Gaps = 2/167 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+I N+V C L+L+KIAL N Y S V M++++P+ TA I+SSGKI+CTG
Sbjct: 12 LITNVVCVFRTRCHLNLRKIALEGLNVIYK-REVSKVLMKLRKPRITATIWSSGKIICTG 70
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE +AK+ AR+ AR +QK+GF V+F +FK+ N++ C + F I+L + ++Y
Sbjct: 71 ATSEEEAKVGARRLARSLQKLGFQVKFTEFKVVNVLAVCTMPFEIRLNEFTKQNRPHASY 130
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYP 170
EPEL P + YR+K T+ IF +G + +TG + + +A IYP
Sbjct: 131 EPELHPAVCYRIKSLRATLQIFSTGSITVTGPDVK-SVASAIEQIYP 176
>gi|328704605|ref|XP_003242546.1| PREDICTED: TATA box-binding protein-like protein 1-like
[Acyrthosiphon pisum]
Length = 301
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 112/169 (66%), Gaps = 3/169 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I N+V +L+ L+L+ +AL+ N EY +TM++++P TA I+SSGKI CTG+
Sbjct: 63 ISNVVTNFSLKSHLNLRYLALNGHNIEYRREN-GMLTMKLRKPNATATIWSSGKIACTGS 121
Query: 65 KSESQAKLAARKYARIVQKIGFP-VQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
SES AK+A+R++ARI+QK+G+ +F ++I N++GSC + FPIK+ + + + + Y
Sbjct: 122 TSESHAKIASRRFARIIQKLGYHNAKFSSYRIVNVLGSCSLPFPIKVIQFSEKYKTIAQY 181
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPEL PG+ +++K+ T+ IF +G + +T A + +Y A IYP++
Sbjct: 182 EPELHPGVTFKIKELKATLKIFSTGSITVT-APSVSNVYQAIEQIYPMV 229
>gi|432945913|ref|XP_004083749.1| PREDICTED: TATA box-binding protein-like protein 1-like [Oryzias
latipes]
Length = 187
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 102/169 (60%), Gaps = 2/169 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+I N+VAT C L+L+ IAL N Y P V M++++P+ TA I+SSGKI+CTG
Sbjct: 12 IITNVVATFRTRCHLNLRTIALEGINVIYKPE-VGKVLMKLRKPRITASIWSSGKIICTG 70
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE +AKL AR+ AR +QK+GF V+F FK+ N++ C + F I L + ++Y
Sbjct: 71 ATSEDEAKLGARRLARCLQKLGFKVRFSAFKVVNVLAVCSMPFSIHLVDFTKNNRPIASY 130
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPEL P YR+K T+ +F +G + ITG + + A +YP+L
Sbjct: 131 EPELHPAATYRIKNIKATVQVFSTGSLTITGPNV-QNVATAVEQVYPLL 178
>gi|392522761|gb|AFM78169.1| TATA box-binding protein, partial [uncultured diatom]
Length = 113
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 63/112 (56%), Positives = 86/112 (76%)
Query: 36 RFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKI 95
RF+AV MR++EP+ TALIF+SGK+ TG KS + LAA+++A I++K+GF DFK+
Sbjct: 2 RFAAVIMRLREPRATALIFASGKMCVTGTKSTHNSSLAAKRFAYIIEKVGFKSTGLDFKV 61
Query: 96 QNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLS 147
QN+VG+ DV FP++LE L H+M+S+YEPELFPGLIYR+ P V LIF+S
Sbjct: 62 QNMVGTVDVGFPVRLEGLVYAHSMYSSYEPELFPGLIYRLGIPRVVFLIFVS 113
>gi|260797205|ref|XP_002593594.1| hypothetical protein BRAFLDRAFT_284100 [Branchiostoma floridae]
gi|229278820|gb|EEN49605.1| hypothetical protein BRAFLDRAFT_284100 [Branchiostoma floridae]
Length = 205
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 103/171 (60%), Gaps = 2/171 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I N+V + C L+L+ IAL+ N Y VTM+++ P TA I+SSGKIVCTGA
Sbjct: 36 IANVVCSFRARCHLNLRMIALNGANVIYK-RELGKVTMKLRRPYCTANIWSSGKIVCTGA 94
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYE 124
+SE AK AR+ AR +Q +GF V F +FK+ N++G C + F IK+ + H ++YE
Sbjct: 95 RSEDDAKKGARRCARTLQNMGFQVHFSEFKVVNVLGICAMPFTIKITLFSKHHKENASYE 154
Query: 125 PELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
PEL PG+ Y+++ P M IF +G + T A I A +IYP+++ +
Sbjct: 155 PELHPGVTYKIRDPKAVMKIFSTGSITCT-APCVANIQRAIEHIYPLVHEF 204
>gi|294939320|ref|XP_002782411.1| TATA-box factor binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239894017|gb|EER14206.1| TATA-box factor binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 255
Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 110/178 (61%), Gaps = 3/178 (1%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEP-KTTALIFSSGKI 59
M PV+ N++A+ L +D K IA + RN EYNP + + +R P K T I+ +GK+
Sbjct: 76 MNPVLDNVIASFELGIDIDPKTIAFNLRNCEYNPRKHNCAVIRFTSPTKATCHIYRNGKV 135
Query: 60 VCTGAKSESQAKLAARKYARIVQKIGF--PVQFKDFKIQNIVGSCDVEFPIKLERLNGFH 117
+ GA + AK +K ++V++I ++F +FK++N++ S DV FPI+LERL H
Sbjct: 136 MINGAYTIELAKKIGKKIVKLVRRITHNPSIKFINFKVENMIASVDVRFPIRLERLAYDH 195
Query: 118 AMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
+ ++TYEPEL GL +R+ P + ++I++SGK+ G K + I AF +IYP+L Y
Sbjct: 196 SAYATYEPELSSGLYFRLFDPKLVIMIYVSGKISFIGGKTLDDISKAFCSIYPLLTQY 253
>gi|156541942|ref|XP_001600485.1| PREDICTED: TATA box-binding protein-like protein 1 [Nasonia
vitripennis]
Length = 283
Score = 138 bits (348), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 110/169 (65%), Gaps = 2/169 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+I N+V + ++ C L+L++IAL+ N EY V MR+++P T A I SSGK+ CTG
Sbjct: 62 IISNVVCSFSVRCHLNLREIALNGSNVEYRREN-GLVRMRLRKPCTLASISSSGKVTCTG 120
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE +AK AAR+ AR +QK+GF V+F +++I N++G+C + + IK+ + + Y
Sbjct: 121 ATSEEEAKKAARRCARSLQKLGFRVRFNNYRIVNVLGTCTMPWAIKITSFSTHYKDIVQY 180
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPE+ PG+IY++K T+ IF +G + +T A + + AA +IYP++
Sbjct: 181 EPEIQPGVIYKLKNMKATLRIFSTGSITVT-APSINAVQAAIEHIYPLV 228
>gi|45387857|ref|NP_991285.1| TATA box-binding protein-like protein 1 [Danio rerio]
gi|33323633|gb|AAQ07595.1|AF503448_1 TBP-like factor [Danio rerio]
Length = 186
Score = 138 bits (348), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 103/169 (60%), Gaps = 2/169 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
++ N+V+ C L+L+ I L N Y P V M++++P+ TA I+SSGKI+CTG
Sbjct: 12 IVTNVVSVFRTRCHLNLRTIGLEGTNVIYKPE-VGKVLMKLRKPRITASIWSSGKIICTG 70
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE +AKL +R+ AR +QK+GF V+F DFK+ N++ C + F I+L + ++Y
Sbjct: 71 ATSEEEAKLGSRRLARCLQKMGFKVRFSDFKVVNVLAVCSMPFQIRLIEFTKNNRPIASY 130
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPEL P YR+K T+ +F +G + +TG + + +A IYP+L
Sbjct: 131 EPELHPAASYRIKNLRSTVQVFSTGNITVTGPNV-QSVASAVEEIYPLL 178
>gi|321468361|gb|EFX79346.1| hypothetical protein DAPPUDRAFT_304868 [Daphnia pulex]
Length = 297
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 110/170 (64%), Gaps = 3/170 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
I N+V + +++ L+LK+IA N EY VTMR+++P TTA I+SSGK+ CTG
Sbjct: 71 TINNVVCSFSVKSHLNLKQIAQSGYNVEYRREN-GMVTMRLRKPYTTASIWSSGKVTCTG 129
Query: 64 AKSESQAKLAARKYARIVQKIGFP-VQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
A SE +AK AAR+ R V K+G+P ++ ++++ N++G+C + F IK+ + H ++
Sbjct: 130 ATSEDEAKQAARRITRSVSKLGYPKLRLVNYRVVNVLGTCTMPFAIKITPFSAKHRDIAS 189
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPEL PG+ YR+K+P T+ IF +G + +T A + +A +IYP++
Sbjct: 190 YEPELHPGVTYRLKEPKATLKIFSTGSITVT-APCVGNVQSAIEHIYPLV 238
>gi|444729025|gb|ELW69456.1| TATA box-binding protein-like protein 1 [Tupaia chinensis]
Length = 186
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 101/167 (60%), Gaps = 2/167 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+I N+V C L+L+KIAL N Y V M++++P+ TA I+SSGKI+CTG
Sbjct: 12 LITNVVCVFRTRCHLNLRKIALEGANVIYKRD-VGKVLMKLRKPRITATIWSSGKIICTG 70
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE +AK AR+ AR +QK+GF V F DFK+ N++ C++ F I+L + ++Y
Sbjct: 71 ATSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASY 130
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYP 170
EPEL P + YR+K T+ IF +G + +TG + + AA IYP
Sbjct: 131 EPELHPAVCYRIKSLRATLQIFSTGSITVTGPNVK-AVAAAVEQIYP 176
>gi|392522725|gb|AFM78151.1| TATA box-binding protein, partial [uncultured diatom]
Length = 114
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 87/113 (76%), Gaps = 1/113 (0%)
Query: 36 RFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGF-PVQFKDFK 94
RF+AV MR++EP+ TAL+F+SGKIV TG KS + LA +K A I++++GF P + +FK
Sbjct: 2 RFAAVIMRLREPRATALVFASGKIVITGTKSSHNSGLATKKIAYILERVGFRPSSYINFK 61
Query: 95 IQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLS 147
+QNIVG+ DV FPI+LE + H FS+YEPELFPGLIYR+ +P V +LIF+S
Sbjct: 62 VQNIVGTVDVGFPIRLEGVAFAHPTFSSYEPELFPGLIYRLGQPRVVLLIFVS 114
Score = 36.6 bits (83), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 128 FPGLIYRMKKPNVTMLIFLSGKVVITGAKA 157
F +I R+++P T L+F SGK+VITG K+
Sbjct: 3 FAAVIMRLREPRATALVFASGKIVITGTKS 32
>gi|83764126|emb|CAJ12158.1| trf2 protein [Drosophila simulans]
Length = 196
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 92/135 (68%), Gaps = 1/135 (0%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
VI N+V + ++ C L L+ IAL N EY VTM+++ P TTA I+SSG+I CTG
Sbjct: 63 VINNVVCSFSVGCHLKLRDIALQGSNVEYRREN-GMVTMKLRHPYTTASIWSSGRITCTG 121
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SES AK+AAR+YAR + K+GFP +F +F+I N++G+C + + IK+ + H ++Y
Sbjct: 122 ATSESMAKVAARRYARCLGKLGFPTRFLNFRIVNVLGTCSMPWAIKIVNFSERHRENASY 181
Query: 124 EPELFPGLIYRMKKP 138
EPEL PG+ Y+M+ P
Sbjct: 182 EPELHPGVTYKMRDP 196
>gi|52345772|ref|NP_001004932.1| TATA box-binding protein-like protein 1 [Xenopus (Silurana)
tropicalis]
gi|82183480|sp|Q6DIY4.1|TBPL1_XENTR RecName: Full=TATA box-binding protein-like protein 1;
Short=TBP-like protein 1; AltName: Full=TATA box-binding
protein-related factor 2; Short=TBP-related factor 2;
AltName: Full=TBP-like factor
gi|49522390|gb|AAH75401.1| TBP-like 1 [Xenopus (Silurana) tropicalis]
gi|89272095|emb|CAJ81743.1| TBP-like 1 [Xenopus (Silurana) tropicalis]
Length = 186
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 101/167 (60%), Gaps = 2/167 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+I N+V C L+L+KIAL N Y V M++++P+ TA I+SSGKI+CTG
Sbjct: 12 IITNVVCVFRTRCHLNLRKIALEGLNVIYK-REVGKVLMKLRKPRITATIWSSGKIICTG 70
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE +AK+ AR+ AR +QK+GF V+F +FK+ N++ C + F I+L + ++Y
Sbjct: 71 ATSEEEAKVGARRLARSLQKLGFQVKFTEFKVVNVLAVCTMPFEIRLAEFTKQNRPHASY 130
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYP 170
EPEL P + YR+K T+ IF +G + +TG + + A IYP
Sbjct: 131 EPELHPAVCYRIKSLRTTLQIFSTGSITVTGPDVK-SVATAIEQIYP 176
>gi|392522651|gb|AFM78114.1| TATA box-binding protein, partial [Chaetoceros affinis]
gi|392522765|gb|AFM78171.1| TATA box-binding protein, partial [uncultured diatom]
gi|392522771|gb|AFM78174.1| TATA box-binding protein, partial [uncultured diatom]
gi|392522773|gb|AFM78175.1| TATA box-binding protein, partial [uncultured diatom]
gi|392522777|gb|AFM78177.1| TATA box-binding protein, partial [uncultured diatom]
Length = 114
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/113 (57%), Positives = 88/113 (77%), Gaps = 1/113 (0%)
Query: 36 RFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGFPVQFK-DFK 94
RF+AV MR++EP+ TALIF+SGK+ TG KS A LA++K+A I++K+GF + DFK
Sbjct: 2 RFAAVIMRLREPRATALIFASGKMCVTGTKSTHNASLASKKFALIIEKVGFKTAPEVDFK 61
Query: 95 IQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLS 147
+QNIVG+ DV FPI+LE L H+ F++YEPELFPGLIYR+ +P V +LIF+S
Sbjct: 62 VQNIVGTADVGFPIRLEGLVYAHSTFASYEPELFPGLIYRLVQPRVVILIFVS 114
>gi|118431620|ref|NP_148219.2| transcription factor [Aeropyrum pernix K1]
gi|152031704|sp|Q9YAT1.3|TBP_AERPE RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|116062944|dbj|BAA80867.2| TATA-box binding protein [Aeropyrum pernix K1]
Length = 203
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 101/165 (61%), Gaps = 2/165 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVAT+ LE +LDL I ++ +YNP +F + R++ P+ T LIF SGK+V TGA
Sbjct: 25 IENIVATVILENQLDLNLIETKIQDVDYNPDQFPGLVYRLESPRVTVLIFKSGKMVITGA 84
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KS +Q +K + G P+ K +IQNIV S +++ I LE+ S Y
Sbjct: 85 KSINQLIHVVKKLLKAFADQGIPISGKPQIQIQNIVASANLKVYIDLEK-AALEFENSLY 143
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
EPE FPGLIYRM +P V MLIF SGK+VITGAK ++Y A +
Sbjct: 144 EPEQFPGLIYRMDEPRVVMLIFSSGKMVITGAKMENEVYDAVKKV 188
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 50/75 (66%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQNIVA+ NL+ +DL+K AL N+ Y P +F + R+ EP+ LIFSSGK+V TGA
Sbjct: 116 IQNIVASANLKVYIDLEKAALEFENSLYEPEQFPGLIYRMDEPRVVMLIFSSGKMVITGA 175
Query: 65 KSESQAKLAARKYAR 79
K E++ A +K AR
Sbjct: 176 KMENEVYDAVKKVAR 190
>gi|281344600|gb|EFB20184.1| hypothetical protein PANDA_019435 [Ailuropoda melanoleuca]
Length = 89
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/89 (70%), Positives = 75/89 (84%)
Query: 66 SESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEP 125
SE Q++LAARKYAR+VQK+GFP +F DFKIQN+VGSCDV F I+LE L H FS+YEP
Sbjct: 1 SEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVGSCDVRFAIRLEGLVLTHQQFSSYEP 60
Query: 126 ELFPGLIYRMKKPNVTMLIFLSGKVVITG 154
ELFPGLIYRM KP + +LIF+SGKVV+TG
Sbjct: 61 ELFPGLIYRMVKPRIVLLIFVSGKVVLTG 89
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 5 IQNIVATINLECKLDLKKIAL-HARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
IQN+V + ++ + L+ + L H + + Y P F + R+ +P+ LIF SGK+V TG
Sbjct: 30 IQNMVGSCDVRFAIRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTG 89
>gi|348506447|ref|XP_003440770.1| PREDICTED: TATA box-binding protein-like protein 1-like
[Oreochromis niloticus]
Length = 187
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 101/169 (59%), Gaps = 2/169 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+I N+VAT C L+L+ IAL N Y P V M++++P TA I+SSGKI+CTG
Sbjct: 12 IITNVVATFRTRCHLNLRTIALEGTNVIYKP-EVGKVLMKLRKPMITASIWSSGKIICTG 70
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE +AKL AR+ AR +QK+GF V+F FK+ N++ C + F + L + ++Y
Sbjct: 71 ATSEDEAKLGARRLARCLQKLGFKVRFSAFKVVNVLAVCSMPFAVHLIDFTKNNRPIASY 130
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPEL P YR+K T+ +F +G + +TG + + A +YP+L
Sbjct: 131 EPELHPAATYRIKNLKATIQVFSTGSLTVTGPNV-QNVATAVEQVYPLL 178
>gi|392522769|gb|AFM78173.1| TATA box-binding protein, partial [uncultured diatom]
Length = 114
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/113 (57%), Positives = 88/113 (77%), Gaps = 1/113 (0%)
Query: 36 RFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGFPVQFK-DFK 94
RF+AV MR++EP+ TALIF+SGK+ TG KS A LA++K+A I++K+GF + DFK
Sbjct: 2 RFAAVIMRLREPRATALIFASGKMCVTGTKSTHNASLASKKFALIIEKVGFKTAPEVDFK 61
Query: 95 IQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLS 147
+QNIVG+ DV FPI+LE L H+ F++YEPELFPGLIYR+ +P V +LIF+S
Sbjct: 62 VQNIVGTADVGFPIQLEGLVYAHSTFASYEPELFPGLIYRLVQPRVVILIFVS 114
>gi|352681411|ref|YP_004891935.1| Box A binding protein [Thermoproteus tenax Kra 1]
gi|269990956|emb|CAP46909.1| TATA-box binding protein [Thermoproteus tenax Kra 1]
gi|350274210|emb|CCC80855.1| TATA-box binding protein (Box A binding protein) (TBP)
[Thermoproteus tenax Kra 1]
Length = 203
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 104/166 (62%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVAT+NL +LDL+++A AEYNP +F + +R+ P+ +ALIF +GK+VCTGA
Sbjct: 13 IENIVATVNLGVELDLEQLAERLPVAEYNPDQFPGLILRLTRPRISALIFRTGKMVCTGA 72
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
K+E+ K A +++ G V + ++QNIV S + + LE+ + Y
Sbjct: 73 KNETDLKNAVHALVKLLNDNGADVPLNPEVQVQNIVASGSLNAEVDLEQA-ALLLDNAMY 131
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIY 169
EPE FPGLIYRM +P V +LIF SGK+V TGAK+ + + A +Y
Sbjct: 132 EPEQFPGLIYRMTEPRVVVLIFGSGKIVCTGAKSEKDVAVAVQRLY 177
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 53/81 (65%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
+QNIVA+ +L ++DL++ AL NA Y P +F + R+ EP+ LIF SGKIVCTGA
Sbjct: 104 VQNIVASGSLNAEVDLEQAALLLDNAMYEPEQFPGLIYRMTEPRVVVLIFGSGKIVCTGA 163
Query: 65 KSESQAKLAARKYARIVQKIG 85
KSE +A ++ ++++G
Sbjct: 164 KSEKDVAVAVQRLYDRLKELG 184
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 94 KIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVIT 153
KI+NIV + ++ + LE+L + Y P+ FPGLI R+ +P ++ LIF +GK+V T
Sbjct: 12 KIENIVATVNLGVELDLEQL-AERLPVAEYNPDQFPGLILRLTRPRISALIFRTGKMVCT 70
Query: 154 GAKAREQIYAAFNNIYPVLN 173
GAK + A + + +LN
Sbjct: 71 GAKNETDLKNAVHALVKLLN 90
>gi|392522759|gb|AFM78168.1| TATA box-binding protein, partial [uncultured diatom]
Length = 113
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/112 (55%), Positives = 85/112 (75%)
Query: 36 RFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKI 95
RF+AV MR++EP+ ALIF+SGK+ TG KS + LAA+++A I++K+GF DFK+
Sbjct: 2 RFAAVIMRLREPRAAALIFASGKMCVTGTKSTHNSSLAAKRFAYIIEKVGFKSTGLDFKV 61
Query: 96 QNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLS 147
QN+VG+ DV FP++LE L H+M+S+YEPELFPGLIYR+ P V LIF+S
Sbjct: 62 QNMVGTVDVGFPVRLEGLVYAHSMYSSYEPELFPGLIYRLGIPRVVFLIFVS 113
>gi|417396717|gb|JAA45392.1| Putative tata-box binding protein tbp component of tfiid and tfiiib
[Desmodus rotundus]
Length = 186
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 100/165 (60%), Gaps = 7/165 (4%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+I N+V C L+L+KIAL N Y V M++++P+ TA I+SSGKI+CTG
Sbjct: 12 LITNVVCVFRTRCHLNLRKIALEGANVIYKRD-VGKVLMKLRKPRITATIWSSGKIICTG 70
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE +AK AR+ AR +QK+GF V F DFK+ N++ C++ F I+L + ++Y
Sbjct: 71 ATSEEEAKFGARRLARCLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASY 130
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITG------AKAREQIY 162
EPEL P + YR+K T+ IF +G + +TG A A EQIY
Sbjct: 131 EPELHPAVCYRIKSLRATLQIFSTGSITVTGPNVKAVATAVEQIY 175
>gi|47224247|emb|CAG09093.1| unnamed protein product [Tetraodon nigroviridis]
Length = 185
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 101/169 (59%), Gaps = 2/169 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I N+VAT C L+L IA + N + P R VTM++++P+ TA I+SSGK++CTGA
Sbjct: 13 ISNVVATFRTGCHLNLYAIACNGHNVIHRPER-GTVTMQLRKPRVTANIWSSGKVICTGA 71
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYE 124
SE +AK+ AR+ AR VQK+ FPV F FK+ N++ + + F I L + + YE
Sbjct: 72 TSEQEAKMGARRIARCVQKLNFPVSFSAFKVVNVMVTSAMPFKISLIDFTKRNRPVTRYE 131
Query: 125 PELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
PEL P +Y M+ P T+ +F +G V I G + A NIYP+L+
Sbjct: 132 PELHPAAMYTMRHPKATVRVFATGSVTIFGPSV-ANVTVAIQNIYPLLS 179
>gi|317575757|ref|NP_001188053.1| TATA box-binding protein-like protein 1 [Ictalurus punctatus]
gi|308324695|gb|ADO29482.1| tata box-binding protein-like protein 1 [Ictalurus punctatus]
Length = 186
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 102/169 (60%), Gaps = 2/169 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+I N+V+ C L+L+ I L N Y P V M++++P+ TA I+SSGKI+CTG
Sbjct: 12 IITNVVSVFRTRCHLNLRTIGLEGNNVIYRPE-VGKVLMKLRKPRITASIWSSGKIICTG 70
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE +AK+ AR+ AR +QKIGF V+F DFK+ N++ C + F I+L + ++Y
Sbjct: 71 ATSEDEAKVGARRLARCLQKIGFKVRFSDFKVVNVLAVCSMPFQIRLIEFTKNNRPIASY 130
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
E EL P YR+K T+ +F +G V +TG + + +A IYP+L
Sbjct: 131 ELELHPAASYRIKTLRATVQVFSTGSVTVTGPNV-QSVASAVEQIYPLL 178
>gi|355748887|gb|EHH53370.1| hypothetical protein EGM_14000, partial [Macaca fascicularis]
Length = 186
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 100/165 (60%), Gaps = 7/165 (4%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+I N+V C L+L+KIAL N Y V M++++P+ TA I+SSGKI+CTG
Sbjct: 12 LITNVVCVFRTRCHLNLRKIALEGANVIYKRD-VGKVLMKLRKPRITATIWSSGKIICTG 70
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE +AK AR+ AR +QK+GF V F DFK+ N++ C++ F I+L + ++Y
Sbjct: 71 ATSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKTNRPHASY 130
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITG------AKAREQIY 162
EPEL P + YR+K T+ IF +G + +TG A A EQIY
Sbjct: 131 EPELHPAVCYRIKSLRATLQIFSTGSITVTGPNVKAVATAVEQIY 175
>gi|149722967|ref|XP_001504421.1| PREDICTED: TATA box-binding protein-like protein 1-like [Equus
caballus]
Length = 186
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 100/167 (59%), Gaps = 2/167 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+I N+V C L+L+KIAL N Y V M++++P+ TA I+SSGKI+CTG
Sbjct: 12 LITNVVCVFRTRCHLNLRKIALEGANVIYKRD-VGKVLMKLRKPRITATIWSSGKIICTG 70
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE +AK AR+ AR +QK+GF V F DFK+ N++ C++ F I+L + ++Y
Sbjct: 71 ATSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASY 130
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYP 170
EPEL P + YR+K T+ IF +G + +TG + + A IYP
Sbjct: 131 EPELHPAVCYRIKSLRATLQIFSTGSITVTGTNVK-AVATAVEQIYP 176
>gi|288931352|ref|YP_003435412.1| TATA-box binding family protein [Ferroglobus placidus DSM 10642]
gi|288893600|gb|ADC65137.1| TATA-box binding family protein [Ferroglobus placidus DSM 10642]
Length = 183
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 100/166 (60%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +DL KIA ++AEY P +F + +R K+PK AL+F SGK+VCTG+
Sbjct: 8 IENVVASTQIGENIDLNKIAREIKDAEYKPKQFPGLVLRTKDPKAAALVFRSGKVVCTGS 67
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS A+ A ++ I++ +G V D ++QNIV S D+ + L + G
Sbjct: 68 KSVEDARRAVKQVVNIIKSLGIEVYDDPDVRVQNIVASADLGVDLNLNAIAVGLGLENIE 127
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR++ P V +LIF SGK+VITG K E A I
Sbjct: 128 YEPEQFPGLVYRLRDPRVVVLIFGSGKMVITGGKKPEDAKRAVEKI 173
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIVA+ +L L+L IA L N EY P +F + R+++P+ LIF SGK+V T
Sbjct: 99 VQNIVASADLGVDLNLNAIAVGLGLENIEYEPEQFPGLVYRLRDPRVVVLIFGSGKMVIT 158
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
G K AK A K + +Q +G
Sbjct: 159 GGKKPEDAKRAVEKISEELQALGL 182
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 90 FKDFKI--QNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLS 147
KD+KI +N+V S + I L ++ + Y+P+ FPGL+ R K P L+F S
Sbjct: 1 MKDYKIKIENVVASTQIGENIDLNKI-AREIKDAEYKPKQFPGLVLRTKDPKAAALVFRS 59
Query: 148 GKVVITGAKAREQIYAAFN---NIYPVLNVYVTYD 179
GKVV TG+K+ E A NI L + V D
Sbjct: 60 GKVVCTGSKSVEDARRAVKQVVNIIKSLGIEVYDD 94
>gi|392522741|gb|AFM78159.1| TATA box-binding protein, partial [uncultured diatom]
Length = 114
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/113 (57%), Positives = 87/113 (76%), Gaps = 1/113 (0%)
Query: 36 RFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGF-PVQFKDFK 94
RF+AV MR++EP+ TALIF+SGK+ TG KS + LA++K+A IV K+GF P DFK
Sbjct: 2 RFAAVIMRLREPRATALIFASGKMCVTGTKSVHNSTLASKKFAYIVDKVGFKPKDEIDFK 61
Query: 95 IQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLS 147
+QN+VG+ DV FPI+LERL H+ F++YEPELFPGLIYR+ +P V L+F+S
Sbjct: 62 VQNMVGTLDVGFPIRLERLVYAHSTFASYEPELFPGLIYRLYEPKVVFLVFVS 114
>gi|68074137|ref|XP_678983.1| transcription initiation factor TFiid, TATA-binding protein
[Plasmodium berghei strain ANKA]
gi|56499609|emb|CAH98178.1| transcription initiation factor TFiid, TATA-binding protein,
putative [Plasmodium berghei]
Length = 252
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 115/172 (66%), Gaps = 4/172 (2%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I NI+++ NL+ +++L+ +A+ ++AEYNPS+ + + +RI PK TALIF SG+I+ TG
Sbjct: 76 IHNIISSANLDAEINLRLVAVSIKSAEYNPSKINTLIIRINNPKCTALIFKSGRIMLTGT 135
Query: 65 KSESQAKLAARKYARIVQKI-GFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KS++ + +K +I++ + ++ K+FKI+NI+ S + P++LE L H + Y
Sbjct: 136 KSKTDSIKGCKKIGKIIKIVTNQNIRLKNFKIENIIASANCNIPVRLEMLAHDHKEYCNY 195
Query: 124 EPELFPGLIYRMKKPN---VTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPELF GL+YR K + +LIF+SGK++ITG K+ +++ F +IY VL
Sbjct: 196 EPELFAGLVYRYKPASNLKSVILIFVSGKIIITGCKSLQKLNTVFQDIYNVL 247
>gi|426234833|ref|XP_004011396.1| PREDICTED: TATA box-binding protein-like protein 1 [Ovis aries]
Length = 186
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 101/167 (60%), Gaps = 2/167 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+I N+V C L+L+KIAL N Y V M++++P+ TA I+SSGKI+CTG
Sbjct: 12 LITNVVCVFRTRCHLNLRKIALEGANVIYKRD-VGKVLMKLRKPRITATIWSSGKIICTG 70
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE +AK AR+ AR +QK+GF V F DFK+ N++ C++ F I+L + ++Y
Sbjct: 71 ATSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASY 130
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYP 170
EPEL P + YR+K T+ IF +G + +TG + + +A IYP
Sbjct: 131 EPELHPAVCYRIKSLRATLQIFSTGSITVTGPNVK-AVASAVEQIYP 176
>gi|45382085|ref|NP_990086.1| TATA box-binding protein-like protein 1 [Gallus gallus]
gi|326915870|ref|XP_003204235.1| PREDICTED: TATA box-binding protein-like protein 1-like [Meleagris
gallopavo]
gi|25091426|sp|Q9YGV8.1|TBPL1_CHICK RecName: Full=TATA box-binding protein-like protein 1;
Short=TBP-like protein 1; AltName: Full=TBP-like factor
gi|4520318|dbj|BAA75886.1| TBP-like protein [Gallus gallus]
Length = 183
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 101/167 (60%), Gaps = 2/167 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+I N+V C L+L+KIAL N Y V M++++P+ TA I+SSGK++CTG
Sbjct: 12 LITNVVCVFRTRCHLNLRKIALEGANVIYKRD-VGKVLMKLRKPRITATIWSSGKVICTG 70
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE +AK AR+ AR +QK+GF V F DFK+ N++ C++ F I+L + ++Y
Sbjct: 71 ATSEEEAKFGARRLARCLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASY 130
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYP 170
EPEL P + YR+K T+ IF +G + +TG + + +A IYP
Sbjct: 131 EPELHPAVCYRIKTLRATLQIFSTGSITVTGPNVK-AVASAVEQIYP 176
>gi|197102368|ref|NP_001126267.1| TATA box-binding protein-like protein 1 [Pongo abelii]
gi|75054881|sp|Q5R7U8.1|TBPL1_PONAB RecName: Full=TATA box-binding protein-like protein 1;
Short=TBP-like protein 1; AltName: Full=TATA box-binding
protein-related factor 2; Short=TBP-related factor 2;
AltName: Full=TBP-like factor; AltName: Full=TBP-related
protein
gi|55730887|emb|CAH92162.1| hypothetical protein [Pongo abelii]
Length = 190
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 100/165 (60%), Gaps = 7/165 (4%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+I N+V C L+L+KIAL N Y V M++++P+ TA I+SSGKI+CTG
Sbjct: 12 LITNVVCVFRTRCHLNLRKIALEGANVIYKRD-VGKVLMKLRKPRITATIWSSGKIICTG 70
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE +AK AR+ AR +QK+GF V F DFK+ N++ C++ F I+L + ++Y
Sbjct: 71 ATSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASY 130
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITG------AKAREQIY 162
EPEL P + YR+K T+ IF +G + +TG A A EQIY
Sbjct: 131 EPELHPAVCYRIKSLRATLQIFSTGSITVTGPNVKAVATAVEQIY 175
>gi|327290497|ref|XP_003229959.1| PREDICTED: TATA box-binding protein-like protein 1-like [Anolis
carolinensis]
Length = 186
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 100/167 (59%), Gaps = 2/167 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+I N+V C L+L+KIAL N Y V M++++P+ TA I+SSGK++CTG
Sbjct: 12 LITNVVCVFRTRCHLNLRKIALEGANVIYKRD-VGKVLMKLRKPRITATIWSSGKVICTG 70
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE +AK AR+ AR +QK+GF V F DFK+ N++ C++ F I+L + ++Y
Sbjct: 71 ATSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKSNRPHASY 130
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYP 170
EPEL P + YR+K T+ IF +G + +TG + + A IYP
Sbjct: 131 EPELHPAVCYRIKSLRATLQIFSTGSITVTGPNVK-TVATAVEQIYP 176
>gi|355723500|gb|AES07911.1| TATA box binding protein-like protein 1 [Mustela putorius furo]
Length = 185
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 100/165 (60%), Gaps = 7/165 (4%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+I N+V C L+L+KIAL N Y V M++++P+ TA I+SSGKI+CTG
Sbjct: 15 LITNVVCVFRTRCHLNLRKIALEGANVIYKRD-VGKVLMKLRKPRITATIWSSGKIICTG 73
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE +AK AR+ AR +QK+GF V F DFK+ N++ C++ F I+L + ++Y
Sbjct: 74 ATSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASY 133
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITG------AKAREQIY 162
EPEL P + YR+K T+ IF +G + +TG A A EQIY
Sbjct: 134 EPELHPAVCYRIKSLRATLQIFSTGSITVTGPNVKAVATAVEQIY 178
>gi|392522775|gb|AFM78176.1| TATA box-binding protein, partial [uncultured diatom]
Length = 114
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 88/113 (77%), Gaps = 1/113 (0%)
Query: 36 RFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGFPVQFK-DFK 94
RF+AV MR++EP+ TALIF+SGK+ TG KS A LA++K+A I++++GF + DFK
Sbjct: 2 RFAAVIMRLREPRATALIFASGKMCVTGTKSTHNASLASKKFALIIEEVGFETAPEVDFK 61
Query: 95 IQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLS 147
+QNIVG+ DV FPI+LE L H+ F++YEPELFPGLIYR+ +P V +LIF+S
Sbjct: 62 VQNIVGTADVGFPIRLEGLVYAHSTFASYEPELFPGLIYRLVQPRVVILIFVS 114
>gi|403282108|ref|XP_003932505.1| PREDICTED: TATA box-binding protein-like protein 1 [Saimiri
boliviensis boliviensis]
Length = 186
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 100/165 (60%), Gaps = 7/165 (4%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+I N+V C L+L+KIAL N Y V M++++P+ TA I+SSGKI+CTG
Sbjct: 12 LITNVVCVFRTRCHLNLRKIALEGANVIYKRD-VGKVLMKLRKPRITATIWSSGKIICTG 70
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE +AK AR+ AR +QK+GF V F DFK+ N++ C++ F I+L + ++Y
Sbjct: 71 ATSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASY 130
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITG------AKAREQIY 162
EPEL P + YR+K T+ IF +G + +TG A A EQIY
Sbjct: 131 EPELHPAVCYRIKSLRATLQIFSTGSITVTGPNVKAVATAVEQIY 175
>gi|4759234|ref|NP_004856.1| TATA box-binding protein-like protein 1 [Homo sapiens]
gi|6755811|ref|NP_035733.1| TATA box-binding protein-like protein 1 [Mus musculus]
gi|115495315|ref|NP_001069758.1| TATA box-binding protein-like protein 1 [Bos taurus]
gi|150010556|ref|NP_001092762.1| TATA box-binding protein-like protein 1 [Pan troglodytes]
gi|187761295|ref|NP_001120673.1| TATA box binding protein-like 1 [Rattus norvegicus]
gi|356582420|ref|NP_001239188.1| TATA box-binding protein-like protein 1 [Canis lupus familiaris]
gi|358439409|ref|NP_001240605.1| TATA box-binding protein-like protein 1 [Homo sapiens]
gi|291397013|ref|XP_002714878.1| PREDICTED: TBP-like 1 [Oryctolagus cuniculus]
gi|301773832|ref|XP_002922334.1| PREDICTED: TATA box-binding protein-like protein 1-like [Ailuropoda
melanoleuca]
gi|311243911|ref|XP_003121240.1| PREDICTED: TATA box-binding protein-like protein 1-like isoform 1
[Sus scrofa]
gi|311243913|ref|XP_003121241.1| PREDICTED: TATA box-binding protein-like protein 1-like isoform 2
[Sus scrofa]
gi|332213363|ref|XP_003255790.1| PREDICTED: TATA box-binding protein-like protein 1 isoform 1
[Nomascus leucogenys]
gi|332213365|ref|XP_003255791.1| PREDICTED: TATA box-binding protein-like protein 1 isoform 2
[Nomascus leucogenys]
gi|390462056|ref|XP_003732780.1| PREDICTED: TATA box-binding protein-like protein 1-like [Callithrix
jacchus]
gi|397514939|ref|XP_003827726.1| PREDICTED: TATA box-binding protein-like protein 1 isoform 1 [Pan
paniscus]
gi|397514941|ref|XP_003827727.1| PREDICTED: TATA box-binding protein-like protein 1 isoform 2 [Pan
paniscus]
gi|402868220|ref|XP_003898208.1| PREDICTED: TATA box-binding protein-like protein 1 isoform 1 [Papio
anubis]
gi|402868222|ref|XP_003898209.1| PREDICTED: TATA box-binding protein-like protein 1 isoform 2 [Papio
anubis]
gi|410960078|ref|XP_003986624.1| PREDICTED: TATA box-binding protein-like protein 1 [Felis catus]
gi|426354625|ref|XP_004044755.1| PREDICTED: TATA box-binding protein-like protein 1 isoform 1
[Gorilla gorilla gorilla]
gi|426354627|ref|XP_004044756.1| PREDICTED: TATA box-binding protein-like protein 1 isoform 2
[Gorilla gorilla gorilla]
gi|61248508|sp|P62340.1|TBPL1_MOUSE RecName: Full=TATA box-binding protein-like protein 1;
Short=TBP-like protein 1; AltName: Full=21 kDa TBP-like
protein; AltName: Full=TATA box-binding protein-related
factor 2; Short=TBP-related factor 2; AltName:
Full=TBP-like factor; AltName: Full=TBP-related protein
gi|61248509|sp|P62380.1|TBPL1_HUMAN RecName: Full=TATA box-binding protein-like protein 1;
Short=TBP-like protein 1; AltName: Full=21 kDa TBP-like
protein; AltName: Full=Second TBP of unique DNA protein;
Short=STUD; AltName: Full=TATA box-binding
protein-related factor 2; Short=TBP-related factor 2;
AltName: Full=TBP-like factor; AltName: Full=TBP-related
protein
gi|75076931|sp|Q4R848.1|TBPL1_MACFA RecName: Full=TATA box-binding protein-like protein 1;
Short=TBP-like protein 1; AltName: Full=TATA box-binding
protein-related factor 2; Short=TBP-related factor 2;
AltName: Full=TBP-like factor; AltName: Full=TBP-related
protein
gi|122143990|sp|Q32LB1.1|TBPL1_BOVIN RecName: Full=TATA box-binding protein-like protein 1;
Short=TBP-like protein 1; AltName: Full=TATA box-binding
protein-related factor 2; Short=TBP-related factor 2;
AltName: Full=TBP-like factor; AltName: Full=TBP-related
protein
gi|4581931|gb|AAD24800.1|AF130312_1 STUD protein [Homo sapiens]
gi|4741974|gb|AAD28785.1|AF136570_1 TATA box binding protein-related factor 2 [Homo sapiens]
gi|4218070|dbj|BAA74578.1| 21-kDa TBP-like protein [Mus musculus]
gi|4579753|dbj|BAA75218.1| TBP-like protein [Homo sapiens]
gi|17028477|gb|AAH17559.1| TBP-like 1 [Homo sapiens]
gi|26340704|dbj|BAC34014.1| unnamed protein product [Mus musculus]
gi|26347363|dbj|BAC37330.1| unnamed protein product [Mus musculus]
gi|67968732|dbj|BAE00724.1| unnamed protein product [Macaca fascicularis]
gi|81674129|gb|AAI09667.1| TBP-like 1 [Bos taurus]
gi|119568380|gb|EAW47995.1| TBP-like 1, isoform CRA_a [Homo sapiens]
gi|119568381|gb|EAW47996.1| TBP-like 1, isoform CRA_a [Homo sapiens]
gi|148672813|gb|EDL04760.1| TATA box binding protein-like 1, isoform CRA_a [Mus musculus]
gi|148672815|gb|EDL04762.1| TATA box binding protein-like 1, isoform CRA_a [Mus musculus]
gi|148910857|tpg|DAA06039.1| TPA_inf: TATA box binding protein-like 1 [Pan troglodytes]
gi|158258072|dbj|BAF85009.1| unnamed protein product [Homo sapiens]
gi|189053895|dbj|BAG36402.1| unnamed protein product [Homo sapiens]
gi|208967921|dbj|BAG73799.1| TBP-like 1 [synthetic construct]
gi|281342972|gb|EFB18556.1| hypothetical protein PANDA_011296 [Ailuropoda melanoleuca]
gi|296483997|tpg|DAA26112.1| TPA: TATA box-binding protein-like protein 1 [Bos taurus]
gi|335775744|gb|AEH58674.1| TATA box-binding protein-like protein 1-like protein [Equus
caballus]
gi|343961185|dbj|BAK62182.1| TATA box-binding protein-like protein 1 [Pan troglodytes]
gi|351696954|gb|EHA99872.1| TATA box-binding protein-like protein 1 [Heterocephalus glaber]
gi|355562045|gb|EHH18677.1| hypothetical protein EGK_15331, partial [Macaca mulatta]
gi|380785063|gb|AFE64407.1| TATA box-binding protein-like protein 1 [Macaca mulatta]
gi|383409717|gb|AFH28072.1| TATA box-binding protein-like protein 1 [Macaca mulatta]
gi|384943312|gb|AFI35261.1| TATA box-binding protein-like protein 1 [Macaca mulatta]
gi|410207162|gb|JAA00800.1| TBP-like 1 [Pan troglodytes]
gi|410252770|gb|JAA14352.1| TBP-like 1 [Pan troglodytes]
gi|410291926|gb|JAA24563.1| TBP-like 1 [Pan troglodytes]
gi|410342865|gb|JAA40379.1| TBP-like 1 [Pan troglodytes]
gi|440912697|gb|ELR62245.1| TATA box-binding protein-like protein 1 [Bos grunniens mutus]
Length = 186
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 100/165 (60%), Gaps = 7/165 (4%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+I N+V C L+L+KIAL N Y V M++++P+ TA I+SSGKI+CTG
Sbjct: 12 LITNVVCVFRTRCHLNLRKIALEGANVIYKRD-VGKVLMKLRKPRITATIWSSGKIICTG 70
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE +AK AR+ AR +QK+GF V F DFK+ N++ C++ F I+L + ++Y
Sbjct: 71 ATSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASY 130
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITG------AKAREQIY 162
EPEL P + YR+K T+ IF +G + +TG A A EQIY
Sbjct: 131 EPELHPAVCYRIKSLRATLQIFSTGSITVTGPNVKAVATAVEQIY 175
>gi|224048129|ref|XP_002191326.1| PREDICTED: TATA box-binding protein-like protein 1 isoform 1
[Taeniopygia guttata]
gi|449497471|ref|XP_004174223.1| PREDICTED: TATA box-binding protein-like protein 1 isoform 2
[Taeniopygia guttata]
Length = 183
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 101/167 (60%), Gaps = 2/167 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+I N+V C L+L+KIAL N Y V M++++P+ TA I+SSGK++CTG
Sbjct: 12 LITNVVCVFRTRCHLNLRKIALEGANVIYKRD-VGKVLMKLRKPRITATIWSSGKVICTG 70
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE +AK AR+ AR +QK+GF V F DFK+ N++ C++ F I+L + ++Y
Sbjct: 71 ATSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASY 130
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYP 170
EPEL P + YR+K T+ IF +G + +TG + + +A IYP
Sbjct: 131 EPELHPAVCYRIKSLRATLQIFSTGSITVTGPNVK-AVASAVEQIYP 176
>gi|327311063|ref|YP_004337960.1| TATA-box-binding protein [Thermoproteus uzoniensis 768-20]
gi|326947542|gb|AEA12648.1| TATA-box-binding protein [Thermoproteus uzoniensis 768-20]
Length = 207
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 104/166 (62%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVAT+NL +LDL+++A AEYNP +F + +R+ +P+ +ALIF +GK+VCTGA
Sbjct: 13 IENIVATVNLGVELDLEQLAEKLPVAEYNPDQFPGLILRLTKPRISALIFRTGKMVCTGA 72
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
K+E+ K A +++ G V + ++QNIV S + + LE+ + Y
Sbjct: 73 KNENDLKNAVHALVKLLNDHGANVPLNPEVQVQNIVASGSLNAEVDLEQA-ALLLENAMY 131
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIY 169
EPE FPGLIYRM P V +LIF SGK+V TGAK+ + + A +Y
Sbjct: 132 EPEQFPGLIYRMTDPRVVVLIFGSGKIVCTGAKSEKDVAVAVQQLY 177
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 53/81 (65%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
+QNIVA+ +L ++DL++ AL NA Y P +F + R+ +P+ LIF SGKIVCTGA
Sbjct: 104 VQNIVASGSLNAEVDLEQAALLLENAMYEPEQFPGLIYRMTDPRVVVLIFGSGKIVCTGA 163
Query: 65 KSESQAKLAARKYARIVQKIG 85
KSE +A ++ +++IG
Sbjct: 164 KSEKDVAVAVQQLYDKLREIG 184
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 89 QFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSG 148
Q KI+NIV + ++ + LE+L + Y P+ FPGLI R+ KP ++ LIF +G
Sbjct: 7 QGPTHKIENIVATVNLGVELDLEQL-AEKLPVAEYNPDQFPGLILRLTKPRISALIFRTG 65
Query: 149 KVVITGAKAREQIYAAFNNIYPVLNVY 175
K+V TGAK + A + + +LN +
Sbjct: 66 KMVCTGAKNENDLKNAVHALVKLLNDH 92
>gi|392522731|gb|AFM78154.1| TATA box-binding protein, partial [uncultured diatom]
Length = 114
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 86/113 (76%), Gaps = 1/113 (0%)
Query: 36 RFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGF-PVQFKDFK 94
RF+AV MR++EP+ TAL+F+SGK V TG KS + LA +K A I+++IGF P + +FK
Sbjct: 2 RFAAVIMRLREPRATALVFASGKTVITGTKSSHNSSLATKKIAYILERIGFQPASYINFK 61
Query: 95 IQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLS 147
+QNIVG+ DV FPI+LE + H FS+YEPELFPGLIYR+ +P V +LIF+S
Sbjct: 62 VQNIVGTVDVGFPIRLEGVAFAHPTFSSYEPELFPGLIYRLVQPRVCLLIFVS 114
Score = 35.8 bits (81), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 128 FPGLIYRMKKPNVTMLIFLSGKVVITGAKA 157
F +I R+++P T L+F SGK VITG K+
Sbjct: 3 FAAVIMRLREPRATALVFASGKTVITGTKS 32
>gi|126311117|ref|XP_001380665.1| PREDICTED: TATA box-binding protein-like protein 1-like
[Monodelphis domestica]
gi|395534983|ref|XP_003769512.1| PREDICTED: TATA box-binding protein-like protein 1 [Sarcophilus
harrisii]
Length = 186
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 100/165 (60%), Gaps = 7/165 (4%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+I N+V C L+L+KIAL N Y V M++++P+ TA I+SSGKI+CTG
Sbjct: 12 LITNVVCVFRTRCHLNLRKIALEGANVIYKRD-VGKVLMKLRKPRITATIWSSGKIICTG 70
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE +AK AR+ AR +QK+GF V F DFK+ N++ C++ F I+L + ++Y
Sbjct: 71 ATSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASY 130
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITG------AKAREQIY 162
EPEL P + YR+K T+ IF +G + +TG A A EQIY
Sbjct: 131 EPELHPAVCYRIKALRATLQIFSTGSITVTGPNVKAVATAVEQIY 175
>gi|449274009|gb|EMC83325.1| TATA box-binding protein-like protein 1 [Columba livia]
Length = 183
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 101/167 (60%), Gaps = 2/167 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+I N+V C L+L+KIAL N Y V M++++P+ TA I+SSGK++CTG
Sbjct: 12 LITNVVCVFRTRCHLNLRKIALEGANVIYKRD-VGKVLMKLRKPRITATIWSSGKVICTG 70
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE +AK AR+ AR +QK+GF V F DFK+ N++ C++ F I+L + ++Y
Sbjct: 71 ATSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASY 130
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYP 170
EPEL P + YR+K T+ IF +G + +TG + + +A IYP
Sbjct: 131 EPELHPAVCYRIKTLRATLQIFSTGSITVTGPNVK-AVASAVEQIYP 176
>gi|118358642|ref|XP_001012562.1| TATA-box binding protein [Tetrahymena thermophila]
gi|89294329|gb|EAR92317.1| TATA-box binding protein [Tetrahymena thermophila SB210]
Length = 231
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 116/192 (60%), Gaps = 24/192 (12%)
Query: 2 APVIQNIVATINL----------ECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTA 51
P IQN+VATI + + DL++IA RN +YNP RF AV MRIK+PK T
Sbjct: 13 TPKIQNVVATIKMIRQDGNSSKQKQTFDLQEIAQKCRNTQYNPKRFPAVFMRIKDPKATG 72
Query: 52 LIFSSGKIVCTGAKSESQAKLAARKYARIVQK---IGFPVQFKDFKIQNIVGSCDVEFPI 108
LI+SSG + G +S ++++ AA + I++K + + K+ +++NIV SC + +P+
Sbjct: 73 LIYSSGNMTIVGTRSTNESQTAAERIFGIIKKQLNVDCRFENKEVQVRNIVASCKLGYPV 132
Query: 109 KLERLNG--FHAMFSTYEPELFPGLIYR--------MKKPNVTMLIFLSGKVVITGAKAR 158
L++++ H FSTY+ + FPGLIYR KK N+ L+F SGK+V TGAK++
Sbjct: 133 CLDKIHDDKDHKQFSTYD-DTFPGLIYRYMLNPGEQKKKNNIIALVFASGKMVFTGAKSQ 191
Query: 159 EQIYAAFNNIYP 170
E I A++ I P
Sbjct: 192 EDIQQAYDKIKP 203
Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%)
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYD 179
+ Y P+ FP + R+K P T LI+ SG + I G ++ + A I+ ++ + D
Sbjct: 51 TQYNPKRFPAVFMRIKDPKATGLIYSSGNMTIVGTRSTNESQTAAERIFGIIKKQLNVD 109
>gi|12653225|gb|AAH00381.1| TBP-like 1 [Homo sapiens]
gi|167774053|gb|ABZ92461.1| TBP-like 1 [synthetic construct]
Length = 186
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 100/165 (60%), Gaps = 7/165 (4%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+I N+V C L+L+KIAL N Y V M++++P+ TA I+SSGKI+CTG
Sbjct: 12 LITNVVCVFRTRCHLNLRKIALEGANVIYKRDA-GKVLMKLRKPRITATIWSSGKIICTG 70
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE +AK AR+ AR +QK+GF V F DFK+ N++ C++ F I+L + ++Y
Sbjct: 71 ATSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASY 130
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITG------AKAREQIY 162
EPEL P + YR+K T+ IF +G + +TG A A EQIY
Sbjct: 131 EPELHPAVCYRIKSLRATLQIFSTGSITVTGPNVKAVATAVEQIY 175
>gi|354500033|ref|XP_003512107.1| PREDICTED: TATA box-binding protein-like protein 1-like [Cricetulus
griseus]
gi|344257078|gb|EGW13182.1| TATA box-binding protein-like protein 1 [Cricetulus griseus]
Length = 186
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 100/165 (60%), Gaps = 7/165 (4%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+I N+V C L+L+KIAL N Y V M++++P+ TA I+SSGKI+CTG
Sbjct: 12 LITNVVCVFRTRCHLNLRKIALEGANVIYKRD-VGKVLMKLRKPRITATIWSSGKIICTG 70
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE +AK AR+ AR +QK+GF V F DFK+ N++ C++ F I+L + ++Y
Sbjct: 71 ATSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASY 130
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITG------AKAREQIY 162
EPEL P + YR+K T+ IF +G + +TG A A EQ+Y
Sbjct: 131 EPELHPAVCYRIKSLRATLQIFSTGSITVTGPNVKAVATAVEQVY 175
>gi|284161184|ref|YP_003399807.1| TATA-box binding family protein [Archaeoglobus profundus DSM 5631]
gi|284011181|gb|ADB57134.1| TATA-box binding family protein [Archaeoglobus profundus DSM 5631]
Length = 184
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 100/166 (60%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +DL KIA +A+Y P +F + +R KEPK ALIF SGK+VCTG+
Sbjct: 9 IENVVASTQIGENIDLNKIAREIPDADYKPKQFPGLVLRTKEPKAAALIFRSGKVVCTGS 68
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS A+ ++ +IV +G PV + + K+QNIV S D+ + L + G
Sbjct: 69 KSVEDARRVVKQIVKIVGSLGIPVIEEPEVKVQNIVASADLGTDLNLNAIAIGLGLENVE 128
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR++ P V +LIF SGK+V+TG K + A I
Sbjct: 129 YEPEQFPGLVYRLRDPRVVVLIFGSGKMVVTGGKTPDDARRAVEKI 174
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIVA+ +L L+L IA L N EY P +F + R+++P+ LIF SGK+V T
Sbjct: 100 VQNIVASADLGTDLNLNAIAIGLGLENVEYEPEQFPGLVYRLRDPRVVVLIFGSGKMVVT 159
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
G K+ A+ A K A ++ +G
Sbjct: 160 GGKTPDDARRAVEKIAEELESLGL 183
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 91 KDFKI--QNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSG 148
+DFKI +N+V S + I L ++ + Y+P+ FPGL+ R K+P LIF SG
Sbjct: 3 RDFKIKIENVVASTQIGENIDLNKI-AREIPDADYKPKQFPGLVLRTKEPKAAALIFRSG 61
Query: 149 KVVITGAKAREQ 160
KVV TG+K+ E
Sbjct: 62 KVVCTGSKSVED 73
>gi|387018946|gb|AFJ51591.1| TATA box-binding protein-like protein 1 [Crotalus adamanteus]
Length = 183
Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 101/167 (60%), Gaps = 2/167 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+I N+V C L+L+KIAL N Y V M++++P+ TA I+SSGK++CTG
Sbjct: 12 LITNVVCVFRTRCHLNLRKIALEGANVIYKRD-VGKVLMKLRKPRITATIWSSGKVICTG 70
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE++AK AR+ AR +QK+GF V F DFK+ N++ C++ F ++L + ++Y
Sbjct: 71 ATSEAEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEVRLPEFTRNNRPHASY 130
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYP 170
EPEL P + YR+K T+ IF +G + +TG + + A IYP
Sbjct: 131 EPELHPAVCYRIKTLRATLQIFSTGSITVTGPNVK-AVATAVEEIYP 176
>gi|392522733|gb|AFM78155.1| TATA box-binding protein, partial [uncultured diatom]
Length = 114
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 85/113 (75%), Gaps = 1/113 (0%)
Query: 36 RFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGF-PVQFKDFK 94
RF+AV MR++EP+ TAL+F+SGK V TG KS A LA +K A I++++GF P FK
Sbjct: 2 RFAAVIMRLREPRATALVFASGKTVITGTKSSHNASLATKKIAYILERVGFQPESHIHFK 61
Query: 95 IQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLS 147
+QNIVG+ DV FPI+LE + H FS+YEPELFPGLIYR+ +P V++LIF+S
Sbjct: 62 VQNIVGTVDVGFPIRLEGVAFAHPTFSSYEPELFPGLIYRLVQPRVSLLIFVS 114
Score = 36.2 bits (82), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 128 FPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
F +I R+++P T L+F SGK VITG K+ A I +L
Sbjct: 3 FAAVIMRLREPRATALVFASGKTVITGTKSSHNASLATKKIAYILE 48
>gi|345328513|ref|XP_001506923.2| PREDICTED: TATA box-binding protein-like protein 1-like isoform 1
[Ornithorhynchus anatinus]
gi|345328515|ref|XP_003431275.1| PREDICTED: TATA box-binding protein-like protein 1-like isoform 2
[Ornithorhynchus anatinus]
Length = 183
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 100/167 (59%), Gaps = 2/167 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+I N+V C L+L+KIAL N Y V M++++P+ TA I+SSGKI+CTG
Sbjct: 12 LITNVVCVFRTRCHLNLRKIALEGANVIYKRD-VGKVLMKLRKPRITATIWSSGKIICTG 70
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE +AK AR+ AR +QK+GF V F DF++ N++ C++ F I+L + ++Y
Sbjct: 71 ATSEEEAKFGARRLARSLQKLGFQVIFTDFRVVNVLAVCNMPFEIRLPEFTKKNRPHASY 130
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYP 170
EPEL P + YR+K T+ IF +G + +TG + + A IYP
Sbjct: 131 EPELHPAVCYRIKTLRATLQIFSTGSITVTGPSVK-AVATAVEQIYP 176
>gi|392522747|gb|AFM78162.1| TATA box-binding protein, partial [uncultured diatom]
Length = 114
Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 86/113 (76%), Gaps = 1/113 (0%)
Query: 36 RFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGF-PVQFKDFK 94
RF+AV MR++EP+ TALIF+SGK+ TG KS + LA++K+A IV K+GF P DFK
Sbjct: 2 RFAAVIMRLREPRATALIFASGKMCVTGTKSVHSSTLASKKFAYIVDKVGFKPKDEIDFK 61
Query: 95 IQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLS 147
+QN+VG+ DV FPI+LE L H+ F++YEPELFPGLIYR+ +P V L+F+S
Sbjct: 62 VQNMVGTLDVSFPIRLEGLVYAHSTFASYEPELFPGLIYRLYEPKVVFLVFVS 114
>gi|11497985|ref|NP_069209.1| transcription factor [Archaeoglobus fulgidus DSM 4304]
gi|6647869|sp|O29874.1|TBP_ARCFU RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|2650259|gb|AAB90862.1| transcription initiation factor IID [Archaeoglobus fulgidus DSM
4304]
Length = 183
Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 102/166 (61%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +DL KI+ +++EY P +F + +R KEPK AL+F SGK+VCTG+
Sbjct: 8 IENVVASTQIGENIDLNKISREIKDSEYKPKQFPGLVLRTKEPKAAALVFRSGKVVCTGS 67
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS A+ A ++ +++++IG V + K+QNIV S D+ + L + G
Sbjct: 68 KSVEDARRAVKQIVKMLKEIGISVIDEPEVKVQNIVASADLGVDLNLNAIAIGLGLENIE 127
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ P V +LIF SGK+V+TG K+ E A I
Sbjct: 128 YEPEQFPGLVYRLDNPRVVVLIFGSGKMVVTGGKSPEDARKAVERI 173
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIVA+ +L L+L IA L N EY P +F + R+ P+ LIF SGK+V T
Sbjct: 99 VQNIVASADLGVDLNLNAIAIGLGLENIEYEPEQFPGLVYRLDNPRVVVLIFGSGKMVVT 158
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
G KS A+ A + + ++ +G
Sbjct: 159 GGKSPEDARKAVERISEELRTLGL 182
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
KI+N+V S + I L +++ S Y+P+ FPGL+ R K+P L+F SGKVV
Sbjct: 6 IKIENVVASTQIGENIDLNKIS-REIKDSEYKPKQFPGLVLRTKEPKAAALVFRSGKVVC 64
Query: 153 TGAKAREQIYAAFNNIYPVL 172
TG+K+ E A I +L
Sbjct: 65 TGSKSVEDARRAVKQIVKML 84
>gi|417904|sp|P32086.1|TBP_PLAFA RecName: Full=TATA-box-binding protein; AltName: Full=TATA
sequence-binding protein; AltName: Full=TATA-binding
factor; AltName: Full=TATA-box factor; AltName:
Full=Transcription initiation factor TFIID TBP subunit
gi|5911375|gb|AAD55768.1|AF177280_1 TATA-binding protein [Plasmodium falciparum]
gi|160700|gb|AAA29769.1| TATA-binding protein [Plasmodium falciparum]
gi|38194140|gb|AAR13208.1| TATA-binding protein [synthetic construct]
Length = 228
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 115/172 (66%), Gaps = 4/172 (2%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I NI+++ NL ++L+ +A+ RNAEYNPS+ + + +R+ +P+ TALIF +G+I+ TG
Sbjct: 52 IHNIISSANLCIDINLRLVAVSIRNAEYNPSKINTLIIRLNKPQCTALIFKNGRIMLTGT 111
Query: 65 KSESQAKLAARKYARIVQKIG-FPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
+++ + + +K A+I++ + V+F +FKI+NI+ S + PI+LE L H + Y
Sbjct: 112 RTKKDSIMGCKKIAKIIKIVTKDKVKFCNFKIENIIASANCNIPIRLEVLAHDHKEYCNY 171
Query: 124 EPELFPGLIYRMKKPN---VTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPELF GL+YR K + +LIF+SGK++ITG K+ ++Y F +IY VL
Sbjct: 172 EPELFAGLVYRYKPTSNLKSVILIFVSGKIIITGCKSVNKLYTVFQDIYNVL 223
>gi|392522727|gb|AFM78152.1| TATA box-binding protein, partial [uncultured diatom]
gi|392522729|gb|AFM78153.1| TATA box-binding protein, partial [uncultured diatom]
Length = 114
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 63/113 (55%), Positives = 86/113 (76%), Gaps = 1/113 (0%)
Query: 36 RFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGF-PVQFKDFK 94
RF+AV MR++EP+ TAL+F+SGK+V TG KS + LA +K A I++++GF P + +FK
Sbjct: 2 RFAAVIMRLREPRATALVFASGKLVITGTKSSHNSSLATKKIAYILERVGFQPASYINFK 61
Query: 95 IQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLS 147
+QNIVG+ DV FPI+LE + H FS+YEPELFPGLIYR+ +P V LIF+S
Sbjct: 62 MQNIVGTVDVGFPIRLEGVAFGHPTFSSYEPELFPGLIYRLFEPRVVFLIFVS 114
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 128 FPGLIYRMKKPNVTMLIFLSGKVVITGAKA 157
F +I R+++P T L+F SGK+VITG K+
Sbjct: 3 FAAVIMRLREPRATALVFASGKLVITGTKS 32
>gi|392522755|gb|AFM78166.1| TATA box-binding protein, partial [uncultured diatom]
Length = 114
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 86/113 (76%), Gaps = 1/113 (0%)
Query: 36 RFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGF-PVQFKDFK 94
RF+AV MR++EP+ TALIF+SGK+ TG KS + LA++K+A IV K+GF P DFK
Sbjct: 2 RFAAVIMRLREPRATALIFASGKMCVTGTKSVHNSTLASKKFAYIVDKVGFKPKDEIDFK 61
Query: 95 IQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLS 147
+QN+VG+ DV FPI+LE L H+ F++YEPELFPGLIYR+ +P V L+F+S
Sbjct: 62 VQNMVGTLDVGFPIRLEGLAYAHSTFASYEPELFPGLIYRLYEPKVVFLVFVS 114
>gi|14423943|sp|Q9UWN7.1|TBP_SULAC RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|6578935|gb|AAF18138.1|AF205428_1 TATA-box binding protein [Sulfolobus acidocaldarius]
Length = 197
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 104/166 (62%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVAT+ L+ LDL + N EY+P +F + R++ PK T+LIF SGK+V TGA
Sbjct: 14 IENIVATVTLDQTLDLYAMERSVPNVEYDPDQFPGLIFRLESPKITSLIFKSGKMVVTGA 73
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KS + A ++ + ++K G + K +IQNIV S ++ + L++ F + Y
Sbjct: 74 KSTDELIKAVKRIIKTLKKYGMQLTGKPKIQIQNIVASANLHVIVNLDK-AAFLLENNMY 132
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIY 169
EPE FPGLIYRM +P V +LIF SGK+VITGAK ++++ A I+
Sbjct: 133 EPEQFPGLIYRMDEPRVVLLIFSSGKMVITGAKREDEVHKAVKKIF 178
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 11/86 (12%)
Query: 95 IQNIVGSCDVEFPIKLERLNGFHAMFST-----YEPELFPGLIYRMKKPNVTMLIFLSGK 149
I+NIV + + L++ +AM + Y+P+ FPGLI+R++ P +T LIF SGK
Sbjct: 14 IENIVAT------VTLDQTLDLYAMERSVPNVEYDPDQFPGLIFRLESPKITSLIFKSGK 67
Query: 150 VVITGAKAREQIYAAFNNIYPVLNVY 175
+V+TGAK+ +++ A I L Y
Sbjct: 68 MVVTGAKSTDELIKAVKRIIKTLKKY 93
>gi|391329921|ref|XP_003739415.1| PREDICTED: TATA box-binding protein-like protein 1-like
[Metaseiulus occidentalis]
Length = 284
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 111/169 (65%), Gaps = 2/169 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
VI N+V + ++ C L+L++IAL N + V+M+++ P TTA I+SSGKI CTG
Sbjct: 60 VINNVVCSFSVGCHLNLRQIALTGANVVFR-RESGMVSMKLRNPYTTASIWSSGKITCTG 118
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE+ +K+AAR++AR +QK+GF +FK+FK+ N++G+C + F I+L + + + Y
Sbjct: 119 ATSENTSKIAARRFARTLQKLGFKARFKNFKVVNVLGTCTMPFAIRLVPFSQTNKPIAQY 178
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPEL PG+ Y++K+ ++ IF +G + +T A + + + I+P++
Sbjct: 179 EPELHPGVTYKIKEIRASLKIFSTGSITVT-APSVSAVQQSIERIFPLV 226
>gi|124506045|ref|XP_001351620.1| transcription initiation factor TFiid, TATA-binding protein
[Plasmodium falciparum 3D7]
gi|23504547|emb|CAD51427.1| transcription initiation factor TFiid, TATA-binding protein
[Plasmodium falciparum 3D7]
Length = 327
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 115/172 (66%), Gaps = 4/172 (2%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I NI+++ NL ++L+ +A+ RNAEYNPS+ + + +R+ +P+ TALIF +G+I+ TG
Sbjct: 151 IHNIISSANLCIDINLRLVAVSIRNAEYNPSKINTLIIRLNKPQCTALIFKNGRIMLTGT 210
Query: 65 KSESQAKLAARKYARIVQKIG-FPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
+++ + + +K A+I++ + V+F +FKI+NI+ S + PI+LE L H + Y
Sbjct: 211 RTKKDSIMGCKKIAKIIKIVTKDKVKFCNFKIENIIASANCNIPIRLEVLAHDHKEYCNY 270
Query: 124 EPELFPGLIYRMKKPN---VTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPELF GL+YR K + +LIF+SGK++ITG K+ ++Y F +IY VL
Sbjct: 271 EPELFAGLVYRYKPTSNLKSVILIFVSGKIIITGCKSVNKLYTVFQDIYNVL 322
>gi|38492428|pdb|1MP9|A Chain A, Tbp From A Mesothermophilic Archaeon, Sulfolobus
Acidocaldarius
gi|38492429|pdb|1MP9|B Chain B, Tbp From A Mesothermophilic Archaeon, Sulfolobus
Acidocaldarius
gi|1419209|emb|CAA64405.1| box A binding protein (BAP) [Sulfolobus acidocaldarius]
Length = 198
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 104/166 (62%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVAT+ L+ LDL + N EY+P +F + R++ PK T+LIF SGK+V TGA
Sbjct: 15 IENIVATVTLDQTLDLYAMERSVPNVEYDPDQFPGLIFRLESPKITSLIFKSGKMVVTGA 74
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KS + A ++ + ++K G + K +IQNIV S ++ + L++ F + Y
Sbjct: 75 KSTDELIKAVKRIIKTLKKYGMQLTGKPKIQIQNIVASANLHVIVNLDK-AAFLLENNMY 133
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIY 169
EPE FPGLIYRM +P V +LIF SGK+VITGAK ++++ A I+
Sbjct: 134 EPEQFPGLIYRMDEPRVVLLIFSSGKMVITGAKREDEVHKAVKKIF 179
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 11/86 (12%)
Query: 95 IQNIVGSCDVEFPIKLERLNGFHAMFST-----YEPELFPGLIYRMKKPNVTMLIFLSGK 149
I+NIV + + L++ +AM + Y+P+ FPGLI+R++ P +T LIF SGK
Sbjct: 15 IENIVAT------VTLDQTLDLYAMERSVPNVEYDPDQFPGLIFRLESPKITSLIFKSGK 68
Query: 150 VVITGAKAREQIYAAFNNIYPVLNVY 175
+V+TGAK+ +++ A I L Y
Sbjct: 69 MVVTGAKSTDELIKAVKRIIKTLKKY 94
>gi|24638240|sp|Q971V3.2|TBP_SULTO RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
Length = 198
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 104/166 (62%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVAT+ L+ LDL + N EY+P +F + R++ PK T+LIF SGK+V TGA
Sbjct: 15 IENIVATVTLDQNLDLYAMERSVPNVEYDPDQFPGLIFRLEAPKVTSLIFKSGKMVVTGA 74
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KS + A ++ + +++ G + K +IQNIV S ++ + L++ F + Y
Sbjct: 75 KSTDELIKAVKRIIKTLKRYGMNLTGKPKIQIQNIVASANLHVIVNLDKA-AFLLENNMY 133
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIY 169
EPE FPGLIYRM+ P V +LIF SGK+VITGAK E+++ A I+
Sbjct: 134 EPEQFPGLIYRMEDPRVVLLIFSSGKMVITGAKREEEVHKAVKKIF 179
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 11/86 (12%)
Query: 95 IQNIVGSCDVEFPIKLERLNGFHAMFST-----YEPELFPGLIYRMKKPNVTMLIFLSGK 149
I+NIV + + L++ +AM + Y+P+ FPGLI+R++ P VT LIF SGK
Sbjct: 15 IENIVAT------VTLDQNLDLYAMERSVPNVEYDPDQFPGLIFRLEAPKVTSLIFKSGK 68
Query: 150 VVITGAKAREQIYAAFNNIYPVLNVY 175
+V+TGAK+ +++ A I L Y
Sbjct: 69 MVVTGAKSTDELIKAVKRIIKTLKRY 94
>gi|385805423|ref|YP_005841821.1| TATA-box-binding protein (TATA-box factor) [Fervidicoccus fontis
Kam940]
gi|383795286|gb|AFH42369.1| TATA-box-binding protein (TATA-box factor) [Fervidicoccus fontis
Kam940]
Length = 206
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 102/173 (58%), Gaps = 4/173 (2%)
Query: 3 PVIQ--NIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
PV+Q NIVAT+ L+ +LDL +I EYNP +F + R+ PK TALIF SGK+V
Sbjct: 16 PVVQIENIVATVTLDQQLDLHEIERKVPRVEYNPDQFPGLVFRLDRPKITALIFKSGKMV 75
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLNGFHAM 119
TG+KS + A ++ + G + + +IQNIV S ++ + LE +
Sbjct: 76 VTGSKSTQELITAVKRIIKTFYNHGIKITGRPKIQIQNIVASANLNVDVNLEDA-AYKLE 134
Query: 120 FSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
+ YEPE FPGLI+RM P V +LIF SGK+VITGAK E++ A NIY L
Sbjct: 135 NNMYEPEQFPGLIHRMTDPYVVLLIFSSGKMVITGAKREEEVSKAVENIYKTL 187
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 45/80 (56%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQNIVA+ NL ++L+ A N Y P +F + R+ +P LIFSSGK+V TGA
Sbjct: 111 IQNIVASANLNVDVNLEDAAYKLENNMYEPEQFPGLIHRMTDPYVVLLIFSSGKMVITGA 170
Query: 65 KSESQAKLAARKYARIVQKI 84
K E + A + ++++
Sbjct: 171 KREEEVSKAVENIYKTLKEL 190
>gi|14424468|sp|Q55031.2|TBP_SULSH RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
Length = 198
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 103/166 (62%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVAT+ LE LDL + N EY+P +F + R+++PK TALIF SGK+V TGA
Sbjct: 14 IENIVATVTLEQSLDLYAMERSIPNIEYDPDQFPGLIFRLEQPKVTALIFKSGKMVVTGA 73
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KS + A ++ + ++K G + K +IQNIV S ++ + L++ F + Y
Sbjct: 74 KSTEELIKAVKRIIKTLKKYGIKIMGKPKIQIQNIVASANLHVNVNLDKA-AFLLENNMY 132
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIY 169
EPE FPGLI+RM P V +LIF SGK+VITGAK +++ A I+
Sbjct: 133 EPEQFPGLIFRMDDPRVVLLIFSSGKMVITGAKREDEVSKAVKRIF 178
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 52/86 (60%), Gaps = 11/86 (12%)
Query: 95 IQNIVGSCDVEFPIKLERLNGFHAMFST-----YEPELFPGLIYRMKKPNVTMLIFLSGK 149
I+NIV + + LE+ +AM + Y+P+ FPGLI+R+++P VT LIF SGK
Sbjct: 14 IENIVAT------VTLEQSLDLYAMERSIPNIEYDPDQFPGLIFRLEQPKVTALIFKSGK 67
Query: 150 VVITGAKAREQIYAAFNNIYPVLNVY 175
+V+TGAK+ E++ A I L Y
Sbjct: 68 MVVTGAKSTEELIKAVKRIIKTLKKY 93
>gi|392522739|gb|AFM78158.1| TATA box-binding protein, partial [uncultured diatom]
Length = 114
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 86/113 (76%), Gaps = 1/113 (0%)
Query: 36 RFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGF-PVQFKDFK 94
RF+AV MR++EP+ TALIF+SGK+ TG KS + LA++K+A IV K+GF P DFK
Sbjct: 2 RFAAVIMRLREPRATALIFASGKMCVTGTKSVHNSTLASKKFAYIVDKVGFKPKDEIDFK 61
Query: 95 IQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLS 147
+QN+VG+ DV FPI+LE L H+ F++YEPELFPGLIYR+ +P V L+F+S
Sbjct: 62 VQNMVGTLDVGFPIRLEGLVYAHSTFTSYEPELFPGLIYRLYEPKVVFLVFVS 114
>gi|886020|gb|AAC43403.1| TATA-binding protein homolog; Method: conceptual translation
supplied by author, partial [Sulfolobus shibatae]
Length = 198
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 103/166 (62%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVAT+ LE LDL + N EY+P +F + R+++PK TALIF SGK+V TGA
Sbjct: 14 IENIVATVTLEQSLDLYAMERSIPNIEYDPDQFPGLIFRLEQPKVTALIFKSGKMVVTGA 73
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KS + A ++ + ++K G + K +IQNIV S ++ + L++ F + Y
Sbjct: 74 KSTEELIKAVKRIIKTLKKYGIKIMGKPKIQIQNIVASANLHVNVNLDKA-AFLLENNMY 132
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIY 169
EPE FPGLI+RM P V +LIF SGK+VITGAK +++ A I+
Sbjct: 133 EPEQFPGLIFRMDDPRVVLLIFSSGKMVITGAKREDEVSKAVKRIF 178
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 52/86 (60%), Gaps = 11/86 (12%)
Query: 95 IQNIVGSCDVEFPIKLERLNGFHAMFST-----YEPELFPGLIYRMKKPNVTMLIFLSGK 149
I+NIV + + LE+ +AM + Y+P+ FPGLI+R+++P VT LIF SGK
Sbjct: 14 IENIVAT------VTLEQSLDLYAMERSIPNIEYDPDQFPGLIFRLEQPKVTALIFKSGK 67
Query: 150 VVITGAKAREQIYAAFNNIYPVLNVY 175
+V+TGAK+ E++ A I L Y
Sbjct: 68 MVVTGAKSTEELIKAVKRIIKTLKKY 93
>gi|392522735|gb|AFM78156.1| TATA box-binding protein, partial [uncultured diatom]
gi|392522757|gb|AFM78167.1| TATA box-binding protein, partial [uncultured diatom]
Length = 114
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 86/113 (76%), Gaps = 1/113 (0%)
Query: 36 RFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGF-PVQFKDFK 94
RF+AV MR++EP+ TALIF+SGK+ TG KS + LA++K+A IV K+GF P DFK
Sbjct: 2 RFAAVIMRLREPRATALIFASGKMCVTGTKSVHNSTLASKKFAYIVDKVGFKPKDEIDFK 61
Query: 95 IQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLS 147
+QN+VG+ DV FPI+LE L H+ F++YEPELFPGLIYR+ +P V L+F+S
Sbjct: 62 VQNMVGTLDVGFPIRLEGLVYAHSTFASYEPELFPGLIYRLYEPKVVFLVFVS 114
>gi|159147345|gb|ABW91067.1| TATA box-binding protein related factor 2 [Bos taurus]
Length = 186
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 99/165 (60%), Gaps = 7/165 (4%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+I N+V C L+L+KIAL N Y V M++++P+ TA I+SSGKI+CTG
Sbjct: 12 LITNVVCVFRTRCHLNLRKIALEGANVIYKRD-VGKVLMKLRKPRITATIWSSGKIICTG 70
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE +AK AR+ AR +QK+GF V DFK+ N++ C++ F I+L + ++Y
Sbjct: 71 ATSEEEAKFGARRLARSLQKLGFQVIXTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASY 130
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITG------AKAREQIY 162
EPEL P + YR+K T+ IF +G + +TG A A EQIY
Sbjct: 131 EPELHPAVCYRIKSLRATLQIFSTGSITVTGPNVKAVATAVEQIY 175
>gi|392522745|gb|AFM78161.1| TATA box-binding protein, partial [uncultured diatom]
Length = 114
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 86/113 (76%), Gaps = 1/113 (0%)
Query: 36 RFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGF-PVQFKDFK 94
RF+AV MR++EP+ TALIF+SGK+ TG KS + LA++K+A IV K+GF P DFK
Sbjct: 2 RFAAVIMRLREPRATALIFASGKMCVTGTKSVHNSTLASKKFAYIVDKVGFKPKDEIDFK 61
Query: 95 IQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLS 147
+QN+VG+ DV FPI+LE L H+ F++YEPELFPGLIYR+ +P V L+F+S
Sbjct: 62 VQNMVGTLDVGFPIRLEGLVYAHSTFASYEPELFPGLIYRLYEPMVVFLVFVS 114
>gi|222481286|ref|YP_002567522.1| transcription factor [Halorubrum lacusprofundi ATCC 49239]
gi|222454662|gb|ACM58925.1| TATA-box binding family protein [Halorubrum lacusprofundi ATCC
49239]
Length = 186
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 96/166 (57%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+VA+ ++ +LDL+ + AE+NP F + R ++PK ALIF SGKIVCTGA
Sbjct: 10 IQNVVASTGIDQELDLETLVDDIPGAEFNPDNFPGLVDRTQDPKAAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
S A ++++G PV + +QNIV S D+ + + L L G
Sbjct: 70 ASVDDVHEALEIIFEKLRELGIPVTDSPEITVQNIVSSADLGYDLNLNALAIGLGLEDVE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YRM+ P V +L+F SGK+VITG K E AA NI
Sbjct: 130 YEPEQFPGLVYRMEDPGVVILLFGSGKIVITGGKFAEDATAAVENI 175
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIV++ +L L+L +A L + EY P +F + R+++P L+F SGKIV T
Sbjct: 101 VQNIVSSADLGYDLNLNALAIGLGLEDVEYEPEQFPGLVYRMEDPGVVILLFGSGKIVIT 160
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
G K A A + +G
Sbjct: 161 GGKFAEDATAAVENIVEKIDDLGL 184
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
+IQN+V S ++ + LE L + + P+ FPGL+ R + P LIF SGK+V
Sbjct: 8 IEIQNVVASTGIDQELDLETLVD-DIPGAEFNPDNFPGLVDRTQDPKAAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIY 169
TGA + + ++ A I+
Sbjct: 67 TGAASVDDVHEALEIIF 83
>gi|14423939|sp|P58178.1|TBP_SULSO RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
Length = 198
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 103/166 (62%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVAT+ LE LDL + N EY+P +F + R+++PK TALIF SGK+V TGA
Sbjct: 14 IENIVATVTLEQSLDLYAMERSIPNIEYDPDQFPGLIFRLEQPKVTALIFKSGKMVVTGA 73
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KS + A ++ + ++K G + K +IQNIV S ++ + L++ F + Y
Sbjct: 74 KSTEELIKAVKRIIKTLKKYGIKIVGKPKIQIQNIVASANLHVNVNLDKA-AFLLENNMY 132
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIY 169
EPE FPGLI+RM P V +LIF SGK+VITGAK +++ A I+
Sbjct: 133 EPEQFPGLIFRMDDPRVVLLIFSSGKMVITGAKREDEVSKAVKRIF 178
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 52/86 (60%), Gaps = 11/86 (12%)
Query: 95 IQNIVGSCDVEFPIKLERLNGFHAMFST-----YEPELFPGLIYRMKKPNVTMLIFLSGK 149
I+NIV + + LE+ +AM + Y+P+ FPGLI+R+++P VT LIF SGK
Sbjct: 14 IENIVAT------VTLEQSLDLYAMERSIPNIEYDPDQFPGLIFRLEQPKVTALIFKSGK 67
Query: 150 VVITGAKAREQIYAAFNNIYPVLNVY 175
+V+TGAK+ E++ A I L Y
Sbjct: 68 MVVTGAKSTEELIKAVKRIIKTLKKY 93
>gi|167042151|gb|ABZ06885.1| putative transcription factor TFIID (or TATA-binding protein, TBP)
[uncultured marine crenarchaeote HF4000_ANIW93E5]
Length = 186
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 108/171 (63%), Gaps = 4/171 (2%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ +++ ++DL +I + EY+P +F + RIK PKT LIFSSGK+VCTGA
Sbjct: 10 IENVVASASVDQRMDLNEITRKFADVEYHPDQFPGLVFRIKSPKTATLIFSSGKMVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKD--FKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
KSE+ ++ A + + ++K G ++ KD IQNIV S ++ I LE+ S
Sbjct: 70 KSETMSRKAVKLVVQQLRKGGIKIK-KDAVVTIQNIVASINLGGRIHLEQA-ARTLPRSM 127
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
YEPE FPGLI+RM P +L+F SGK+V TGAK +Y + NN++ +L
Sbjct: 128 YEPEQFPGLIHRMVDPKTVILLFSSGKLVCTGAKKEPDVYRSVNNLHSLLE 178
>gi|167042577|gb|ABZ07300.1| putative transcription factor TFIID (or TATA-binding protein, TBP)
[uncultured marine crenarchaeote HF4000_ANIW133I6]
Length = 186
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 108/171 (63%), Gaps = 4/171 (2%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ +++ ++DL +I + EY+P +F + RIK PKT LIFSSGK+VCTGA
Sbjct: 10 IENVVASASVDQRMDLNEITRKFADVEYHPDQFPGLVFRIKSPKTATLIFSSGKMVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKD--FKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
KSE+ ++ A + + ++K G ++ KD IQNIV S ++ I LE+ S
Sbjct: 70 KSETMSRKAVKLVVQQLRKGGIKIK-KDAVVTIQNIVASINLGGRIHLEQA-ARTLPRSM 127
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
YEPE FPGLI+RM P +L+F SGK+V TGAK +Y + NN++ +L
Sbjct: 128 YEPEQFPGLIHRMVDPKTVILLFSSGKLVCTGAKKEPDVYRSVNNLHSLLE 178
>gi|392522743|gb|AFM78160.1| TATA box-binding protein, partial [uncultured diatom]
Length = 114
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 85/113 (75%), Gaps = 1/113 (0%)
Query: 36 RFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGF-PVQFKDFK 94
RF+AV MR++EP+ TALIF+SGK+ TG KS LA++K+A IV K+GF P DFK
Sbjct: 2 RFAAVIMRLREPRATALIFASGKMCVTGTKSVHSPTLASKKFAYIVDKVGFKPKDEIDFK 61
Query: 95 IQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLS 147
+QN+VG+ DV FPI+LE L H+ F++YEPELFPGLIYR+ +P V L+F+S
Sbjct: 62 VQNMVGTLDVGFPIRLEGLVYAHSTFASYEPELFPGLIYRLYEPKVVFLVFVS 114
>gi|348565514|ref|XP_003468548.1| PREDICTED: TATA box-binding protein-like protein 1-like [Cavia
porcellus]
Length = 165
Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 94/151 (62%), Gaps = 1/151 (0%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+I N+V C L+L+KIAL N Y V M++++P+ TA I+SSGKI+CTG
Sbjct: 12 LITNVVCVFRTRCHLNLRKIALEGANVIYKRD-VGKVLMKLRKPRITATIWSSGKIICTG 70
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE +AK AR+ AR +QK+GF V F DFK+ N++ C++ F I+L + ++Y
Sbjct: 71 ATSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASY 130
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITG 154
EPEL P + YR+K T+ IF +G + +TG
Sbjct: 131 EPELHPAVCYRIKSLRATLQIFSTGSITVTG 161
>gi|161528106|ref|YP_001581932.1| 2-alkenal reductase [Nitrosopumilus maritimus SCM1]
gi|407462144|ref|YP_006773461.1| 2-alkenal reductase [Candidatus Nitrosopumilus koreensis AR1]
gi|160339407|gb|ABX12494.1| 2-alkenal reductase [Nitrosopumilus maritimus SCM1]
gi|407045766|gb|AFS80519.1| 2-alkenal reductase [Candidatus Nitrosopumilus koreensis AR1]
Length = 186
Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/171 (42%), Positives = 108/171 (63%), Gaps = 4/171 (2%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
++N+VA+ +++ K+DL +I + EY+P +F + R+K PKT LIF+SGK+VCTG+
Sbjct: 10 VENVVASASVDQKMDLNEITRTFPDVEYHPDQFPGLVFRLKSPKTATLIFTSGKMVCTGS 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKD--FKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
KSE A+ A + + ++K G V+ KD +IQNIV S ++ I LE+ S
Sbjct: 70 KSEEMARKAVKTVVQKLRKGGIKVK-KDAVVEIQNIVASINLGGKIHLEQA-ARTLPRSM 127
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
YEPE FPGLI+RM P +L+F SGK+V TGAK +Y + NN++ +L
Sbjct: 128 YEPEQFPGLIHRMLDPKTVILLFSSGKLVCTGAKKEPDVYRSVNNLHALLE 178
>gi|329764826|ref|ZP_08256418.1| 2-alkenal reductase [Candidatus Nitrosoarchaeum limnia SFB1]
gi|340344477|ref|ZP_08667609.1| TATA-box binding protein [Candidatus Nitrosoarchaeum koreensis MY1]
gi|393796672|ref|ZP_10380036.1| 2-alkenal reductase [Candidatus Nitrosoarchaeum limnia BG20]
gi|329138693|gb|EGG42937.1| 2-alkenal reductase [Candidatus Nitrosoarchaeum limnia SFB1]
gi|339519618|gb|EGP93341.1| TATA-box binding protein [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 186
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 108/170 (63%), Gaps = 4/170 (2%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
++N+VA+ +++ K+DL +I + EY+P +F + R+K PKT LIF+SGK+VCTG+
Sbjct: 10 VENVVASASVDQKMDLNEITRTFPDVEYHPDQFPGLVFRLKSPKTATLIFTSGKMVCTGS 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKD--FKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
KSE A+ A + + ++K G V+ KD +IQNIV S ++ I LE+ S
Sbjct: 70 KSEEMARKAVKTVVQKLRKGGIKVK-KDATVEIQNIVASINLGGKIHLEQA-ARTLPRSM 127
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPE FPGLI+RM P +L+F SGK+V TGAK +Y + NN++ +L
Sbjct: 128 YEPEQFPGLIHRMLDPKTVILLFSSGKLVCTGAKKEPDVYRSVNNLHALL 177
>gi|16517082|gb|AAL24503.1|AF418015_1 TATA box-binding protein-like protein [Crypthecodinium cohnii]
Length = 220
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 107/174 (61%), Gaps = 3/174 (1%)
Query: 7 NIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKS 66
I+A NL C++DL+++A R+AEYNP + S++T+R+ EP+ TA++ SSG + TG
Sbjct: 47 TIMAKFNLRCEIDLRQLAFALRHAEYNPRKHSSLTLRLVEPRATAMVRSSGVVSITGVLD 106
Query: 67 ESQAKLAARKYARIVQKIG---FPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
+ K +A+K AR+VQ+ G V+F F I +I+ + FPI+L++L + Y
Sbjct: 107 LDELKQSAKKVARLVQRSGEGHEKVKFAGFTICSILAKASMGFPIRLDQLAAKWRRNALY 166
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVT 177
EPEL+ G I+R +P T L+ GKV+I+G + E ++ A IYP+L + T
Sbjct: 167 EPELYCGCIFRTTRPKCTYLLTSGGKVMISGFRNMEDVHEAVQRIYPILAEFKT 220
>gi|320100857|ref|YP_004176449.1| TATA-binding protein of transcription factor TFIID [Desulfurococcus
mucosus DSM 2162]
gi|319753209|gb|ADV64967.1| TATA binding protein of transcription factor TFIID [Desulfurococcus
mucosus DSM 2162]
Length = 193
Score = 132 bits (332), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 100/165 (60%), Gaps = 2/165 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
++NIVAT+ LE LDL+ I + Y P +F + R+ +P+ TAL+F SGK+V TG
Sbjct: 13 VENIVATVILEHDLDLELIETRIPSITYKPDQFPGLIFRLDKPRATALVFKSGKMVVTGT 72
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKD-FKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KS Q A +K ++ K G V+ + +IQNIV D+ + LE+ +H S Y
Sbjct: 73 KSTQQLVEAVKKIIKVFMKSGVDVRGRPRVQIQNIVAGGDIHAYVNLEK-AAYHLEDSMY 131
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
EPE FPGLI+RM+ P V +LIF SGK+VITGAK ++ A NI
Sbjct: 132 EPEQFPGLIHRMRDPRVVLLIFSSGKMVITGAKEESEVERAVVNI 176
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 48/75 (64%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQNIVA ++ ++L+K A H ++ Y P +F + R+++P+ LIFSSGK+V TGA
Sbjct: 104 IQNIVAGGDIHAYVNLEKAAYHLEDSMYEPEQFPGLIHRMRDPRVVLLIFSSGKMVITGA 163
Query: 65 KSESQAKLAARKYAR 79
K ES+ + A AR
Sbjct: 164 KEESEVERAVVNIAR 178
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
++++NIV + +E + LE + TY+P+ FPGLI+R+ KP T L+F SGK+V+
Sbjct: 11 YRVENIVATVILEHDLDLELIETRIPSI-TYKPDQFPGLIFRLDKPRATALVFKSGKMVV 69
Query: 153 TGAKAREQIYAAFNNIYPV 171
TG K+ +Q+ A I V
Sbjct: 70 TGTKSTQQLVEAVKKIIKV 88
>gi|374325915|ref|YP_005084115.1| hypothetical protein P186_0409 [Pyrobaculum sp. 1860]
gi|356641184|gb|AET31863.1| hypothetical protein P186_0409 [Pyrobaculum sp. 1860]
Length = 186
Score = 132 bits (332), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 104/164 (63%), Gaps = 6/164 (3%)
Query: 12 INLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAK 71
+NL +LDL+++A AEYNP +F + +R+ +P+ +ALIF +GK+VCTGAK+E K
Sbjct: 1 MNLGVELDLEQLAERLTMAEYNPDQFPGLILRLTKPRISALIFRTGKMVCTGAKNEEDLK 60
Query: 72 LAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLER--LNGFHAMFSTYEPELF 128
A R ++++ G V F + +IQNIV S ++ + LE+ L +AM YEPE F
Sbjct: 61 NAVRALVKLLKDHGADVPFDPEVQIQNIVASGNLHAEVDLEQAVLMLENAM---YEPEQF 117
Query: 129 PGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
PGLIYRM P V +LIF SGK+V TGAK+ + + A +Y L
Sbjct: 118 PGLIYRMSSPRVVILIFGSGKIVCTGAKSEKDVATAVQKLYAQL 161
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQNIVA+ NL ++DL++ L NA Y P +F + R+ P+ LIF SGKIVCTGA
Sbjct: 85 IQNIVASGNLHAEVDLEQAVLMLENAMYEPEQFPGLIYRMSSPRVVILIFGSGKIVCTGA 144
Query: 65 KSESQAKLAARK-YARI 80
KSE A +K YA++
Sbjct: 145 KSEKDVATAVQKLYAQL 161
>gi|392522753|gb|AFM78165.1| TATA box-binding protein, partial [uncultured diatom]
Length = 114
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 63/113 (55%), Positives = 84/113 (74%), Gaps = 1/113 (0%)
Query: 36 RFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGF-PVQFKDFK 94
RF+AV MR++EP+ TALIF+SGK+ TG KS + LA++K+A IV K+GF P DFK
Sbjct: 2 RFAAVIMRLREPRATALIFASGKMCVTGTKSVHNSTLASKKFAYIVDKVGFKPKDETDFK 61
Query: 95 IQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLS 147
+QN+VG+ DV FPI+LE L H F++YEPELFPGLIYR+ +P L+F+S
Sbjct: 62 VQNMVGTLDVGFPIRLEGLVYAHFTFASYEPELFPGLIYRLYEPKAVFLVFVS 114
>gi|218883586|ref|YP_002427968.1| transcription factor [Desulfurococcus kamchatkensis 1221n]
gi|218765202|gb|ACL10601.1| transcription factor - TATA-box-binding protein [Desulfurococcus
kamchatkensis 1221n]
Length = 194
Score = 132 bits (331), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 99/165 (60%), Gaps = 2/165 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
++NIVAT+ LE LDL+ I + Y P +F + R+ +P+ TAL+F SGK+V TG
Sbjct: 12 VENIVATVILEHDLDLELIETRIPSITYKPDQFPGLIFRLDKPRATALVFKSGKMVVTGT 71
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KS Q A +K + K G V + +IQNIV D+ + LE+ +H S Y
Sbjct: 72 KSTQQLVEAVKKIIKTFVKNGVNVHGRPRVQIQNIVAGGDIHAYVNLEKA-AYHLEDSMY 130
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
EPE FPGLI+RM+ P V +LIF SGK+VITGAK ++ A NNI
Sbjct: 131 EPEQFPGLIHRMRDPRVVLLIFSSGKMVITGAKEEVEVERAVNNI 175
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQNIVA ++ ++L+K A H ++ Y P +F + R+++P+ LIFSSGK+V TGA
Sbjct: 103 IQNIVAGGDIHAYVNLEKAAYHLEDSMYEPEQFPGLIHRMRDPRVVLLIFSSGKMVITGA 162
Query: 65 KSESQAKLAARKYARIVQKIG 85
K E + + A AR + K G
Sbjct: 163 KEEVEVERAVNNIARQLYKAG 183
>gi|195143693|ref|XP_002012832.1| GL23716 [Drosophila persimilis]
gi|194101775|gb|EDW23818.1| GL23716 [Drosophila persimilis]
Length = 640
Score = 132 bits (331), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 106/167 (63%), Gaps = 3/167 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+I+N+V + N+ C+LDL IA N +Y+ SR +TM+++ P TALI+SSG+I CTG
Sbjct: 240 LIRNVVCSFNVGCQLDLSDIAQRGFNVKYHRSR--NLTMKLRRPAATALIWSSGRINCTG 297
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
SE AK+AAR++AR + K+GFP +F++F+I+ ++G+C + + I + + H +
Sbjct: 298 TTSEILAKVAARRFARCLWKLGFPTRFQNFRIETVLGTCRMPWDINIVNFSKKHPENAKQ 357
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYP 170
EPE+ + Y+M+ P T+ IF +G + + A + +A +IYP
Sbjct: 358 EPEMHWCVTYKMQMPKATLKIFTTGSITVMAASV-NLVESAIGHIYP 403
>gi|390938384|ref|YP_006402122.1| TATA binding protein of transcription factor TFIID [Desulfurococcus
fermentans DSM 16532]
gi|390191491|gb|AFL66547.1| TATA binding protein of transcription factor TFIID [Desulfurococcus
fermentans DSM 16532]
Length = 194
Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 99/165 (60%), Gaps = 2/165 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
++NIVAT+ LE LDL+ I + Y P +F + R+ +P+ TAL+F SGK+V TG
Sbjct: 12 VENIVATVILEHDLDLELIETRIPSITYKPDQFPGLIFRLDKPRATALVFKSGKMVVTGT 71
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KS Q A +K + K G V + +IQNIV D+ + LE+ +H S Y
Sbjct: 72 KSTQQLVEAVKKIIKTFVKNGVNVHGRPRVQIQNIVAGGDIHAYVNLEKA-AYHLEDSMY 130
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
EPE FPGLI+RM+ P V +LIF SGK+VITGAK ++ A NNI
Sbjct: 131 EPEQFPGLIHRMRDPRVVLLIFSSGKMVITGAKEEVEVERAVNNI 175
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQNIVA ++ ++L+K A H ++ Y P +F + R+++P+ LIFSSGK+V TGA
Sbjct: 103 IQNIVAGGDIHAYVNLEKAAYHLEDSMYEPEQFPGLIHRMRDPRVVLLIFSSGKMVITGA 162
Query: 65 KSESQAKLAARKYARIVQKIG 85
K E + + A AR + K G
Sbjct: 163 KEEVEVERAVNNIARQLYKAG 183
>gi|392522737|gb|AFM78157.1| TATA box-binding protein, partial [uncultured diatom]
Length = 114
Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 63/113 (55%), Positives = 85/113 (75%), Gaps = 1/113 (0%)
Query: 36 RFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGF-PVQFKDFK 94
RF+AV R++EP+ TALIF+SGK+ TG KS + LA++K+A IV K+GF P DFK
Sbjct: 2 RFAAVITRLREPRATALIFASGKMCVTGTKSVHNSTLASKKFAYIVDKVGFKPKDEIDFK 61
Query: 95 IQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLS 147
+QN+VG+ DV FPI+LE L H+ F++YEPELFPGLIYR+ +P V L+F+S
Sbjct: 62 VQNMVGTLDVGFPIRLEGLVYAHSTFASYEPELFPGLIYRLYEPKVVFLVFVS 114
>gi|118576418|ref|YP_876161.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Cenarchaeum symbiosum A]
gi|118194939|gb|ABK77857.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Cenarchaeum symbiosum A]
Length = 186
Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 107/170 (62%), Gaps = 2/170 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
++N+VA+ +++ K+DL +I + EY+P +F + R+K PKT LIF+SGK+VCTG+
Sbjct: 10 VENVVASASVDQKMDLNEITRTFPDVEYHPDQFPGLVFRLKSPKTATLIFTSGKMVCTGS 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKD-FKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KSE A+ A + + ++K G V+ + +IQNIV S ++ I LE+ S Y
Sbjct: 70 KSEEMARKAVKTVVQKLRKGGIKVKKEAVVEIQNIVASINLGGKIHLEQ-AARTLPRSMY 128
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
EPE FPGLI+RM P +L+F SGK+V TGAK +Y + NN++ +L
Sbjct: 129 EPEQFPGLIHRMLDPKTVILLFSSGKLVCTGAKKEPDVYRSVNNLHALLE 178
>gi|424813992|ref|ZP_18239170.1| TATA binding protein of transcription factor TFIID [Candidatus
Nanosalina sp. J07AB43]
gi|339757608|gb|EGQ42865.1| TATA binding protein of transcription factor TFIID [Candidatus
Nanosalina sp. J07AB43]
Length = 183
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 99/165 (60%), Gaps = 2/165 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+VA+ + L L +IA++ N EY P +F + R++EPK AL+F SGKIVCTG
Sbjct: 9 IQNVVASATFDQSLPLDRIAIYLENTEYEPEQFPGLVYRLEEPKAAALLFGSGKIVCTGT 68
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
+S QAK A K +++ + K + +QNIV S +++ + L R+ F + + Y
Sbjct: 69 QSPEQAKEATHKIIDELKEADVEITNKPEITVQNIVASSELDATLNLNRI-AFELVGTEY 127
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
EPE FPGL+YR+ +P V L+F SG +V TG + + + +N+
Sbjct: 128 EPEQFPGLVYRLDEPEVVFLLFSSGNLVCTGGRTYDDVENGISNL 172
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 88 VQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLS 147
V+ D IQN+V S + + L+R+ + + YEPE FPGL+YR+++P L+F S
Sbjct: 2 VEDDDIDIQNVVASATFDQSLPLDRI-AIYLENTEYEPEQFPGLVYRLEEPKAAALLFGS 60
Query: 148 GKVVITGAKAREQIYAAFNNI 168
GK+V TG ++ EQ A + I
Sbjct: 61 GKIVCTGTQSPEQAKEATHKI 81
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+QNIVA+ L+ L+L +IA EY P +F + R+ EP+ L+FSSG +VCTG
Sbjct: 99 TVQNIVASSELDATLNLNRIAFELVGTEYEPEQFPGLVYRLDEPEVVFLLFSSGNLVCTG 158
Query: 64 AKSESQAKLAARKYARIVQKI 84
++ + R +++I
Sbjct: 159 GRTYDDVENGISNLERDLKEI 179
>gi|328794393|ref|XP_001123347.2| PREDICTED: TATA-box-binding protein-like, partial [Apis mellifera]
Length = 169
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 78/103 (75%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QN+V+T+NL +L L I RN+EYNP+RF + MRI+ P+ TALIF SGKIV
Sbjct: 64 IEPCLQNVVSTVNLGIELPLMYINTRTRNSEYNPARFMGLIMRIRNPRATALIFHSGKIV 123
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCD 103
CTGA+SE + LA RK+ARI+QK+GF +F +FKIQNIV +CD
Sbjct: 124 CTGARSEEDSYLATRKFARIIQKLGFAAKFYNFKIQNIVATCD 166
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 95 IQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITG 154
+QN+V + ++ + L +N S Y P F GLI R++ P T LIF SGK+V TG
Sbjct: 68 LQNVVSTVNLGIELPLMYINT-RTRNSEYNPARFMGLIMRIRNPRATALIFHSGKIVCTG 126
Query: 155 AKAREQIYAA 164
A++ E Y A
Sbjct: 127 ARSEEDSYLA 136
>gi|424811982|ref|ZP_18237222.1| TATA binding protein of transcription factor TFIID [Candidatus
Nanosalinarum sp. J07AB56]
gi|339756204|gb|EGQ39787.1| TATA binding protein of transcription factor TFIID [Candidatus
Nanosalinarum sp. J07AB56]
Length = 187
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 99/158 (62%), Gaps = 2/158 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ L+ ++ L +IA++ N EY P +F + R+ EPK AL+F SGK+VCTG
Sbjct: 14 IENVVASTTLDRRMPLDRIAIYLENTEYEPEQFPGLVYRLDEPKAAALLFGSGKVVCTGT 73
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
+S +QAK A K +++ + K D +QN+V S +++ + L R+ F + + Y
Sbjct: 74 QSPTQAKEAVHKIIDELREADIEIGKKPDITVQNMVASSELDATLNLNRI-AFELVGTEY 132
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQI 161
EPE FPGL+YR+ +P V L+F SG++V TG K + +
Sbjct: 133 EPEQFPGLVYRLDEPKVVFLLFSSGRIVCTGGKTYDDV 170
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+QN+VA+ L+ L+L +IA EY P +F + R+ EPK L+FSSG+IVCTG
Sbjct: 104 TVQNMVASSELDATLNLNRIAFELVGTEYEPEQFPGLVYRLDEPKVVFLLFSSGRIVCTG 163
Query: 64 AKSESQAKLAARKYARIVQKIG 85
K+ + K ++++G
Sbjct: 164 GKTYDDVENGIEKLKENLKELG 185
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 87 PVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFL 146
P + ++ KI+N+V S ++ + L+R+ + + YEPE FPGL+YR+ +P L+F
Sbjct: 6 PFEDENIKIENVVASTTLDRRMPLDRI-AIYLENTEYEPEQFPGLVYRLDEPKAAALLFG 64
Query: 147 SGKVVITGAKAREQIYAAFNNI 168
SGKVV TG ++ Q A + I
Sbjct: 65 SGKVVCTGTQSPTQAKEAVHKI 86
>gi|21706933|gb|AAH33926.1| Tbpl1 protein [Mus musculus]
Length = 188
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 93/150 (62%), Gaps = 1/150 (0%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+I N+V C L+L+KIAL N Y V M++++P+ TA I+SSGKI+CTG
Sbjct: 12 LITNVVCVFRTRCHLNLRKIALEGANVIYKRD-VGKVLMKLRKPRITATIWSSGKIICTG 70
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE +AK AR+ AR +QK+GF V F DFK+ N++ C++ F I+L + ++Y
Sbjct: 71 ATSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASY 130
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVIT 153
EPEL P + YR+K T+ IF +G + +T
Sbjct: 131 EPELHPAVCYRIKSLRATLQIFSTGSITVT 160
>gi|328719261|ref|XP_003246709.1| PREDICTED: TATA box-binding protein-like protein 1-like isoform 1
[Acyrthosiphon pisum]
gi|328719263|ref|XP_003246710.1| PREDICTED: TATA box-binding protein-like protein 1-like isoform 2
[Acyrthosiphon pisum]
Length = 288
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 112/169 (66%), Gaps = 3/169 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I N+ A+ N++ L+L+ +ALH N EY + + + M++++P TA+I+SSGKIVC G+
Sbjct: 56 ISNVSASFNVKSHLNLRYLALHGHNVEYKREK-AKLVMKLRKPSATAIIWSSGKIVCIGS 114
Query: 65 KSESQAKLAARKYARIVQKIGFP-VQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
SE +K+A+++ ARI+Q++G+ +F FKI N++GSC + F I++ + + + + S Y
Sbjct: 115 ASEYDSKIASKRIARIIQRLGYSDAKFSSFKIINVLGSCSLPFSIRIIQFSEKYKLNSQY 174
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPEL PG+ YR+K+ T+ I+ +G + + A + + A +IYP++
Sbjct: 175 EPELNPGVTYRIKEFKATLKIYSTGSITV-NASSEAIVQLAIEHIYPLV 222
>gi|386875594|ref|ZP_10117754.1| transcription factor [Candidatus Nitrosopumilus salaria BD31]
gi|386806582|gb|EIJ66041.1| transcription factor [Candidatus Nitrosopumilus salaria BD31]
Length = 186
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/171 (42%), Positives = 106/171 (61%), Gaps = 4/171 (2%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
++N+VA+ ++ K+DL +I + EY+P +F + R+K PKT LIF+SGK+VCTG+
Sbjct: 10 VENVVASADVMQKMDLNEITRTFPDVEYHPDQFPGLVFRLKTPKTATLIFTSGKMVCTGS 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKD--FKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
KSE A+ A + + ++K G V+ KD IQNIV S ++ I LE+ S
Sbjct: 70 KSEEMARKAVKTVVQKLRKGGIKVK-KDAVVTIQNIVASINLGGKIHLEQ-AARTLPRSM 127
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
YEPE FPGLI+RM P +L+F SGK+V TGAK +Y + NN++ +L
Sbjct: 128 YEPEQFPGLIHRMLDPKTVILLFSSGKLVCTGAKHEPDVYRSVNNLHALLE 178
>gi|359417767|ref|ZP_09209836.1| transcription factor [Candidatus Haloredivivus sp. G17]
gi|358031860|gb|EHK00695.1| transcription factor [Candidatus Haloredivivus sp. G17]
Length = 182
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 94/158 (59%), Gaps = 2/158 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+VA+ +L L +IA++ N EY P +F + R++ PK AL+F SGK+VCTG
Sbjct: 9 IQNVVASATFNQRLPLDRIAIYLENTEYEPEQFPGLVYRLENPKAAALLFGSGKVVCTGT 68
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KS QAK A K +++ + K D +QNIV S +E + L R+ F + + Y
Sbjct: 69 KSPEQAKEATHKIIDELREADVEIDTKPDVTVQNIVASSQLEGTLNLNRI-AFELVGTEY 127
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQI 161
EPE FPGL+YR+ +P V L+F SG +V TG + E +
Sbjct: 128 EPEQFPGLVYRLDEPQVVFLLFSSGNLVCTGGRTYEDV 165
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
+QNIVA+ LE L+L +IA EY P +F + R+ EP+ L+FSSG +VCTG
Sbjct: 100 VQNIVASSQLEGTLNLNRIAFELVGTEYEPEQFPGLVYRLDEPQVVFLLFSSGNLVCTGG 159
Query: 65 KSESQAKLAARKYARIVQKIG 85
++ K K +++IG
Sbjct: 160 RTYEDVKEGIAKLEENLKEIG 180
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 88 VQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLS 147
V+ D +IQN+V S + L+R+ + + YEPE FPGL+YR++ P L+F S
Sbjct: 2 VEDDDIEIQNVVASATFNQRLPLDRI-AIYLENTEYEPEQFPGLVYRLENPKAAALLFGS 60
Query: 148 GKVVITGAKAREQIYAAFNNI 168
GKVV TG K+ EQ A + I
Sbjct: 61 GKVVCTGTKSPEQAKEATHKI 81
>gi|407464492|ref|YP_006775374.1| 2-alkenal reductase [Candidatus Nitrosopumilus sp. AR2]
gi|407047680|gb|AFS82432.1| 2-alkenal reductase [Candidatus Nitrosopumilus sp. AR2]
Length = 186
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/171 (42%), Positives = 106/171 (61%), Gaps = 4/171 (2%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
++N+VA+ ++ K+DL +I + EY+P +F + R+K PKT LIF+SGK+VCTG+
Sbjct: 10 VENVVASADVMQKMDLNEITRTFPDVEYHPDQFPGLVFRLKTPKTATLIFTSGKMVCTGS 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKD--FKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
KSE A+ A + + ++K G V+ KD IQNIV S ++ I LE+ S
Sbjct: 70 KSEEMARKAVKTVVQKLRKGGIKVK-KDAVVTIQNIVASINLGGKIHLEQ-AARTLPRSM 127
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
YEPE FPGLI+RM P +L+F SGK+V TGAK +Y + NN++ +L
Sbjct: 128 YEPEQFPGLIHRMLDPKTVILLFSSGKLVCTGAKQEPDVYRSVNNLHALLE 178
>gi|72133443|ref|XP_798726.1| PREDICTED: TATA box-binding protein-like protein 1-like
[Strongylocentrotus purpuratus]
Length = 325
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 99/171 (57%), Gaps = 2/171 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I N+V + C L+L++I + N EY + V MR + P TA I+SSGKI TG
Sbjct: 102 INNVVCAFGVRCHLNLRRIGQYGSNVEYR-REYGKVNMRFRRPSATATIWSSGKITITGN 160
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYE 124
SE AK AR+ AR +QK+GF V+ +K+ N++G+C + F I++ + H ++YE
Sbjct: 161 DSEEHAKKNARRCARALQKLGFNVRLSKYKVVNVLGTCSMPFAIRIRDFSEKHQNSASYE 220
Query: 125 PELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
PEL P + Y++ +P T+ IF +G + +T A A I A IYP++ +
Sbjct: 221 PELHPAVTYKLYQPRATLKIFSTGSITVT-APAVGNISEAIEFIYPLVEAH 270
>gi|339237017|ref|XP_003380063.1| TATA-box-binding protein [Trichinella spiralis]
gi|316977178|gb|EFV60321.1| TATA-box-binding protein [Trichinella spiralis]
Length = 315
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 106/170 (62%), Gaps = 4/170 (2%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTM-RIKEPKTTALIFSSGKIVCTG 63
I+N+V N+ C LDL IA+H N Y R+ V + +IK+P+ ++SSGKI +G
Sbjct: 108 IRNVVTMFNVCCHLDLHHIAMHTCNVIYE--RYRGVLIFQIKKPRCYVKMWSSGKITVSG 165
Query: 64 AKSESQAKLAARKYARIVQKIGFP-VQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
A+SE +A+ ++R ARIVQKI P V+F D+++ NI+ +C + F I++ L + S+
Sbjct: 166 AQSEEEARKSSRSVARIVQKIVGPRVRFADYRVTNIMATCKLPFGIRIPNLATEYPRESS 225
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPEL GL++R P T+ I +G + ITGA+++ I ++YP+L
Sbjct: 226 YEPELSIGLVWRSASPKATLRIHSTGSITITGAESQADILTVMESLYPIL 275
>gi|392522749|gb|AFM78163.1| TATA box-binding protein, partial [uncultured diatom]
Length = 114
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/113 (54%), Positives = 84/113 (74%), Gaps = 1/113 (0%)
Query: 36 RFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGF-PVQFKDFK 94
RF+ V R++EP+ TALIF+SGK+ TG KS + LA++K+A IV K+GF P DFK
Sbjct: 2 RFATVITRLREPRATALIFASGKMCVTGTKSVHNSTLASKKFAYIVDKVGFKPKDGIDFK 61
Query: 95 IQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLS 147
+QN+VG+ DV FPI+LE L H+ F++YEPELFPGLIYR+ +P V L+F+S
Sbjct: 62 VQNMVGTLDVGFPIRLEGLVYAHSTFASYEPELFPGLIYRLYEPKVVFLVFVS 114
>gi|149032878|gb|EDL87733.1| rCG41948, isoform CRA_b [Rattus norvegicus]
gi|149032879|gb|EDL87734.1| rCG41948, isoform CRA_b [Rattus norvegicus]
Length = 218
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 93/150 (62%), Gaps = 1/150 (0%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+I N+V C L+L+KIAL N Y V M++++P+ TA I+SSGKI+CTG
Sbjct: 12 LITNVVCVFRTRCHLNLRKIALEGANVIYKRD-VGKVLMKLRKPRITATIWSSGKIICTG 70
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
A SE +AK AR+ AR +QK+GF V F DFK+ N++ C++ F I+L + ++Y
Sbjct: 71 ATSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASY 130
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVIT 153
EPEL P + YR+K T+ IF +G + +T
Sbjct: 131 EPELHPAVCYRIKSLRATLQIFSTGSITVT 160
>gi|148672814|gb|EDL04761.1| TATA box binding protein-like 1, isoform CRA_b [Mus musculus]
Length = 206
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 95/153 (62%), Gaps = 7/153 (4%)
Query: 16 CKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAAR 75
C L+L+KIAL N Y V M++++P+ TA I+SSGKI+CTGA SE +AK AR
Sbjct: 44 CHLNLRKIALEGANVIYKRD-VGKVLMKLRKPRITATIWSSGKIICTGATSEEEAKFGAR 102
Query: 76 KYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRM 135
+ AR +QK+GF V F DFK+ N++ C++ F I+L + ++YEPEL P + YR+
Sbjct: 103 RLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASYEPELHPAVCYRI 162
Query: 136 KKPNVTMLIFLSGKVVITG------AKAREQIY 162
K T+ IF +G + +TG A A EQIY
Sbjct: 163 KSLRATLQIFSTGSITVTGPNVKAVATAVEQIY 195
>gi|296109497|ref|YP_003616446.1| TATA-box binding family protein [methanocaldococcus infernus ME]
gi|295434311|gb|ADG13482.1| TATA-box binding family protein [Methanocaldococcus infernus ME]
Length = 187
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 100/165 (60%), Gaps = 2/165 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I N+V + + +DL+++AL NAEY P +F + R+ +PK L+F SGK+ CTGA
Sbjct: 6 IVNVVVSTKIADSIDLEEVALVLENAEYEPEQFPGLVCRLNDPKVALLMFRSGKVNCTGA 65
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KS+ +A+ A +K + ++ GF V + + K+QN+V + D+ F L + + + Y
Sbjct: 66 KSKEEAERAIKKIIKELKDAGFDVNENPEIKVQNMVATADLGFEPDLNEI-AIYVDETEY 124
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
EPE FPGL+YR+ P V +LIF SGKVVITG K+ E A I
Sbjct: 125 EPEQFPGLVYRLNDPKVVVLIFGSGKVVITGLKSEEDAKKALEKI 169
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 49/80 (61%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
+QN+VAT +L + DL +IA++ EY P +F + R+ +PK LIF SGK+V TG
Sbjct: 97 VQNMVATADLGFEPDLNEIAIYVDETEYEPEQFPGLVYRLNDPKVVVLIFGSGKVVITGL 156
Query: 65 KSESQAKLAARKYARIVQKI 84
KSE AK A K +++I
Sbjct: 157 KSEEDAKKALEKIKETIREI 176
>gi|389847604|ref|YP_006349843.1| TATA-binding transcription initiation factor [Haloferax
mediterranei ATCC 33500]
gi|448617457|ref|ZP_21666044.1| transcription factor [Haloferax mediterranei ATCC 33500]
gi|388244910|gb|AFK19856.1| TATA-binding transcription initiation factor [Haloferax
mediterranei ATCC 33500]
gi|445748377|gb|ELZ99824.1| transcription factor [Haloferax mediterranei ATCC 33500]
Length = 188
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 97/164 (59%), Gaps = 2/164 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+VA+ + +LDL+ +++ A+Y+P F + R +EPK +LIF SGKIVCTGA
Sbjct: 12 IQNVVASTAVGQELDLESLSMDLVGADYDPDNFPGLVYRTQEPKAASLIFRSGKIVCTGA 71
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
S A + + K+G P + + + IQNIV S D+ + L L G
Sbjct: 72 SSVDDVDRALEQVFGELSKLGIPTEDREEATIQNIVSSADLGTTLNLNALAIGLGLEDVE 131
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFN 166
YEPE FPGL+YR+ +P+V +L+F SGK+VITGAK E A N
Sbjct: 132 YEPEQFPGLVYRIDEPSVVVLMFGSGKIVITGAKQVEHAREAIN 175
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 89 QFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSG 148
+ + +IQN+V S V + LE L+ + + Y+P+ FPGL+YR ++P LIF SG
Sbjct: 6 RLESLEIQNVVASTAVGQELDLESLS-MDLVGADYDPDNFPGLVYRTQEPKAASLIFRSG 64
Query: 149 KVVITGAKAREQIYAAFNNIYPVLN 173
K+V TGA + + + A ++ L+
Sbjct: 65 KIVCTGASSVDDVDRALEQVFGELS 89
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
IQNIV++ +L L+L +A L + EY P +F + RI EP L+F SGKIV T
Sbjct: 103 IQNIVSSADLGTTLNLNALAIGLGLEDVEYEPEQFPGLVYRIDEPSVVVLMFGSGKIVIT 162
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
GAK A+ A + +G
Sbjct: 163 GAKQVEHAREAINVVTDEIDSLGL 186
>gi|448581629|ref|ZP_21645410.1| transcription factor [Haloferax gibbonsii ATCC 33959]
gi|445733392|gb|ELZ84962.1| transcription factor [Haloferax gibbonsii ATCC 33959]
Length = 188
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 94/166 (56%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+VA+ + +LDL++++L +Y+P F + R ++PK+ L+F SGK+VCTGA
Sbjct: 12 IQNVVASTEVPVELDLERLSLDMDGTDYDPENFPGLVYRTRDPKSACLVFRSGKVVCTGA 71
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
S A +G PV + D +QNIV S D+ + L L G
Sbjct: 72 DSVDDVGTAIETLFDEFTDLGVPVPEDADITVQNIVSSADLGAALNLNALAIGLGLEDVE 131
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ +P+V +L+F SGKVVITGAK AA +
Sbjct: 132 YEPEQFPGLVYRLDEPSVVVLMFGSGKVVITGAKRTTDAEAALKTV 177
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
+IQN+V S +V + LERL+ + Y+PE FPGL+YR + P L+F SGKVV
Sbjct: 10 IEIQNVVASTEVPVELDLERLS-LDMDGTDYDPENFPGLVYRTRDPKSACLVFRSGKVVC 68
Query: 153 TGAKAREQIYAAFNNIY 169
TGA + + + A ++
Sbjct: 69 TGADSVDDVGTAIETLF 85
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIV++ +L L+L +A L + EY P +F + R+ EP L+F SGK+V T
Sbjct: 103 VQNIVSSADLGAALNLNALAIGLGLEDVEYEPEQFPGLVYRLDEPSVVVLMFGSGKVVIT 162
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
GAK + A+ A + V+++G
Sbjct: 163 GAKRTTDAEAALKTVDEDVRELGL 186
>gi|156937779|ref|YP_001435575.1| TATA binding protein of transcription factor TFIID [Ignicoccus
hospitalis KIN4/I]
gi|156566763|gb|ABU82168.1| TATA binding protein of transcription factor TFIID [Ignicoccus
hospitalis KIN4/I]
Length = 207
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 106/169 (62%), Gaps = 6/169 (3%)
Query: 5 IQNIVATINLECKLDLKKIALH-ARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
I+NIVAT++++ +DL+KI N EY+P +F + R++EP+ TALIF SGK+V TG
Sbjct: 13 IENIVATVSIDQNIDLEKIEKEFDSNVEYDPDQFPGLIFRLEEPRVTALIFKSGKMVVTG 72
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFK---DFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
AKS + A +K I++ G V K +IQNIV S ++ + LE+ +
Sbjct: 73 AKSTQELITAVKKIFYILKSKGI-VSGKVRPRIQIQNIVASANLGVEVHLEK-AAYLLEN 130
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIY 169
S YEPE FPGLIYR+ +P V +L+F SGK+V+TGAK E++ A ++
Sbjct: 131 SMYEPEQFPGLIYRLDEPRVVLLLFSSGKMVVTGAKKEEEVSKAVEKVF 179
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 53/80 (66%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
KI+NIV + ++ I LE++ Y+P+ FPGLI+R+++P VT LIF SGK+V+
Sbjct: 11 IKIENIVATVSIDQNIDLEKIEKEFDSNVEYDPDQFPGLIFRLEEPRVTALIFKSGKMVV 70
Query: 153 TGAKAREQIYAAFNNIYPVL 172
TGAK+ +++ A I+ +L
Sbjct: 71 TGAKSTQELITAVKKIFYIL 90
>gi|198450906|ref|XP_002137175.1| GA26713 [Drosophila pseudoobscura pseudoobscura]
gi|198131246|gb|EDY67733.1| GA26713 [Drosophila pseudoobscura pseudoobscura]
Length = 642
Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats.
Identities = 62/172 (36%), Positives = 109/172 (63%), Gaps = 3/172 (1%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+I+N+V + N+ C+LDL IA N +Y+ SR +TM+++ P TALI+SSG+I CTG
Sbjct: 240 LIRNVVCSFNVGCQLDLSDIAQRGFNVKYHKSR--NLTMKLRRPAATALIWSSGRINCTG 297
Query: 64 AKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
SE AK+AAR++AR + K+GFP F++F+I+ ++G+C + + I + + H +
Sbjct: 298 TTSEILAKVAARRFARCLWKLGFPTSFQNFRIETVLGTCRMPWDINIVNFSKKHPENAKQ 357
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
+PE+ + Y+M+ P T+ IF +G + + A+ + +A +IYP++ +
Sbjct: 358 DPEMHWCVTYKMQMPKATLKIFTTGSITVMAARV-NLVESAIEHIYPLVREF 408
>gi|261403691|ref|YP_003247915.1| transcription factor [Methanocaldococcus vulcanius M7]
gi|261370684|gb|ACX73433.1| TATA-box binding family protein [Methanocaldococcus vulcanius M7]
Length = 180
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 102/171 (59%), Gaps = 4/171 (2%)
Query: 1 MAPVIQ--NIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGK 58
M P I+ N+V + + +DL+++AL NAEY P +F + R+ PK LIF SGK
Sbjct: 1 MEPEIKIVNVVVSTKIGDNIDLEEVALILENAEYEPEQFPGLVCRLSVPKVALLIFRSGK 60
Query: 59 IVCTGAKSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLNGFH 117
+ CTGAKS+ +A++A +K + ++ G V + + KIQN+V + D+ L+ +
Sbjct: 61 VNCTGAKSKEEAEIAIKKIIKELKDAGIEVIENPEIKIQNMVATADLGIEPNLDDI-ALM 119
Query: 118 AMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
+ YEPE FPGL+YR+ P V +LIF SGKVVITG K+ E A N I
Sbjct: 120 VEGTEYEPEQFPGLVYRLDDPKVVVLIFGSGKVVITGLKSEEDAKRALNKI 170
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 47/80 (58%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+VAT +L + +L IAL EY P +F + R+ +PK LIF SGK+V TG
Sbjct: 98 IQNMVATADLGIEPNLDDIALMVEGTEYEPEQFPGLVYRLDDPKVVVLIFGSGKVVITGL 157
Query: 65 KSESQAKLAARKYARIVQKI 84
KSE AK A K ++++
Sbjct: 158 KSEEDAKRALNKILETIKEV 177
>gi|448567600|ref|ZP_21637525.1| transcription factor [Haloferax prahovense DSM 18310]
gi|445711598|gb|ELZ63388.1| transcription factor [Haloferax prahovense DSM 18310]
Length = 188
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 94/166 (56%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+VA+ + +LDL++++L +Y+P F + R ++PK+ L+F SGKIVCTGA
Sbjct: 12 IQNVVASTEVPVELDLERLSLDMDGTDYDPENFPGLVYRTRDPKSACLVFRSGKIVCTGA 71
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
S A +G PV + D +QNIV S D+ + L L G
Sbjct: 72 DSVDDVSTAIETLFDEFTDLGVPVPEDADITVQNIVSSADLGEALNLNALAIGLGLEAVE 131
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ +P+V +L+F SGK+VITGAK AA +
Sbjct: 132 YEPEQFPGLVYRLDEPSVVVLMFGSGKIVITGAKRTADAEAALKTV 177
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
+IQN+V S +V + LERL+ + Y+PE FPGL+YR + P L+F SGK+V
Sbjct: 10 IEIQNVVASTEVPVELDLERLS-LDMDGTDYDPENFPGLVYRTRDPKSACLVFRSGKIVC 68
Query: 153 TGAKAREQIYAAFNNIY 169
TGA + + + A ++
Sbjct: 69 TGADSVDDVSTAIETLF 85
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIV++ +L L+L +A L EY P +F + R+ EP L+F SGKIV T
Sbjct: 103 VQNIVSSADLGEALNLNALAIGLGLEAVEYEPEQFPGLVYRLDEPSVVVLMFGSGKIVIT 162
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
GAK + A+ A + V+++G
Sbjct: 163 GAKRTADAEAALKTVDEDVRELGL 186
>gi|289193261|ref|YP_003459202.1| TATA-box binding family protein [Methanocaldococcus sp. FS406-22]
gi|288939711|gb|ADC70466.1| TATA-box binding family protein [Methanocaldococcus sp. FS406-22]
Length = 180
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 102/171 (59%), Gaps = 4/171 (2%)
Query: 1 MAPVIQ--NIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGK 58
M P I+ N+V + + +DL+++A+ NAEY P +F + R+ PK LIF SGK
Sbjct: 1 MEPEIKIVNVVVSTKIGDNIDLEEVAMILENAEYEPEQFPGLVCRLSVPKVALLIFRSGK 60
Query: 59 IVCTGAKSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLNGFH 117
+ CTGAKS+ +A++A +K + +++ G V + D KIQN+V + D+ L+ +
Sbjct: 61 VNCTGAKSKEEAEIAIKKVIKELKEAGMDVIENPDIKIQNMVATADLGIEPNLDDI-ALM 119
Query: 118 AMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
+ YEPE FPGL+YR+ P V +LIF SGKVVITG K+ E A I
Sbjct: 120 VEGTEYEPEQFPGLVYRLDDPKVVVLIFGSGKVVITGLKSEEDAKRALKKI 170
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 48/80 (60%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+VAT +L + +L IAL EY P +F + R+ +PK LIF SGK+V TG
Sbjct: 98 IQNMVATADLGIEPNLDDIALMVEGTEYEPEQFPGLVYRLDDPKVVVLIFGSGKVVITGL 157
Query: 65 KSESQAKLAARKYARIVQKI 84
KSE AK A +K ++++
Sbjct: 158 KSEEDAKRALKKILDTIKEV 177
>gi|161899533|ref|XP_001712992.1| TATA binding protein of transcription factor IID [Bigelowiella
natans]
gi|75756487|gb|ABA27380.1| TATA binding protein of transcription factor IID [Bigelowiella
natans]
Length = 204
Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 103/165 (62%), Gaps = 1/165 (0%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I N+V ++ L+ LDLKKIAL ++N E+N RF + MR ++PK TA++F SG ++CTGA
Sbjct: 20 IHNVVLSVRLDSILDLKKIALRSKNTEFNSKRFHGLIMRSRDPKATAIVFKSGSMICTGA 79
Query: 65 KSESQAKLAARKYARIVQKIGF-PVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KSE K A K+ +I++ GF ++ ++++I NI + D + PI L +++ + +
Sbjct: 80 KSEKDGKEAILKFVKIIRNAGFTDLKMQNYRITNIFATMDYKVPINLMQIHIAFPRITKH 139
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
EPE+ GL+Y + + I+ SGK+ ITGAK+ + NN+
Sbjct: 140 EPEVHRGLLYYPFDTKLLVTIYASGKITITGAKSMSILERVRNNL 184
>gi|325188734|emb|CCA23265.1| TATAboxbinding protein putative [Albugo laibachii Nc14]
Length = 216
Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 100/167 (59%), Gaps = 6/167 (3%)
Query: 7 NIVATINLECKLDLKKIALHARNAEYN-PSRFSAVTMRIKEPKTTALIFSSGKIVCTGAK 65
N++ + ++ LD+K +AL RNA+Y F+ + +R + P+ + + + SGK + GAK
Sbjct: 30 NLLGSGSIRGALDVKNLALMIRNADYAVRGGFNGMILRFRTPRASVIAYRSGKFIVIGAK 89
Query: 66 SESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEP 125
S + A L +K+ I+QK G P + FKI N +CD++F R + + YEP
Sbjct: 90 SPAVADLVIQKFQDILQKSGAPHELVSFKIHNFCAACDLKF-----RKIAYKDASAQYEP 144
Query: 126 ELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
ELFPGLIYRM P TML+F+SGK+VITG + E A NI+PVL
Sbjct: 145 ELFPGLIYRMLVPKCTMLVFISGKIVITGFQKIEDGEQALCNIFPVL 191
>gi|448576731|ref|ZP_21642607.1| transcription factor [Haloferax larsenii JCM 13917]
gi|445728919|gb|ELZ80519.1| transcription factor [Haloferax larsenii JCM 13917]
Length = 188
Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 94/163 (57%), Gaps = 2/163 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+VA+ +E +LDLK ++L EYNP F + R +PK+ L+F SGKIVCTGA
Sbjct: 12 IQNVVASTGIEQELDLKSLSLDMAGTEYNPDNFPGLVYRTSDPKSACLVFRSGKIVCTGA 71
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
S A + +G P+ + + +QNIV S D+ + L L G
Sbjct: 72 DSVEGVHAALDILFEELSDLGIPLPDEPEITVQNIVSSADLRSNLNLNALAIGLGLEDVE 131
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAF 165
YEPE FPGL+YR+++P+V +L+F SGKVVITGAK Q A
Sbjct: 132 YEPEQFPGLVYRLEEPSVVVLMFGSGKVVITGAKEVAQAEQAI 174
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIV++ +L L+L +A L + EY P +F + R++EP L+F SGK+V T
Sbjct: 103 VQNIVSSADLRSNLNLNALAIGLGLEDVEYEPEQFPGLVYRLEEPSVVVLMFGSGKVVIT 162
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
GAK +QA+ A VQK+G
Sbjct: 163 GAKEVAQAEQAIEVVRDEVQKLGL 186
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 91 KDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKV 150
+ +IQN+V S +E + L+ L+ + Y P+ FPGL+YR P L+F SGK+
Sbjct: 8 ESIEIQNVVASTGIEQELDLKSLS-LDMAGTEYNPDNFPGLVYRTSDPKSACLVFRSGKI 66
Query: 151 VITGAKAREQIYAAFNNIYPVLN 173
V TGA + E ++AA + ++ L+
Sbjct: 67 VCTGADSVEGVHAALDILFEELS 89
>gi|448591939|ref|ZP_21651314.1| transcription factor [Haloferax elongans ATCC BAA-1513]
gi|445733228|gb|ELZ84803.1| transcription factor [Haloferax elongans ATCC BAA-1513]
Length = 188
Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 94/163 (57%), Gaps = 2/163 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+VA+ +E +LDLK ++L EYNP F + R +PK+ L+F SGKIVCTGA
Sbjct: 12 IQNVVASTGIEQELDLKSLSLDMAGTEYNPDNFPGLVYRTSDPKSACLVFRSGKIVCTGA 71
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
S A + +G P+ + + +QNIV S D+ + L L G
Sbjct: 72 DSVEGVHAALDILFEELSDLGIPLPDEPEITVQNIVSSADLRSNLNLNALAIGLGLEDVE 131
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAF 165
YEPE FPGL+YR+++P+V +L+F SGKVVITGAK Q A
Sbjct: 132 YEPEQFPGLVYRLEEPSVVVLMFGSGKVVITGAKEVAQAEEAI 174
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIV++ +L L+L +A L + EY P +F + R++EP L+F SGK+V T
Sbjct: 103 VQNIVSSADLRSNLNLNALAIGLGLEDVEYEPEQFPGLVYRLEEPSVVVLMFGSGKVVIT 162
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
GAK +QA+ A + VQK+G
Sbjct: 163 GAKEVAQAEEAIKVVRDEVQKLGL 186
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 91 KDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKV 150
+ +IQN+V S +E + L+ L+ + Y P+ FPGL+YR P L+F SGK+
Sbjct: 8 ESIEIQNVVASTGIEQELDLKSLS-LDMAGTEYNPDNFPGLVYRTSDPKSACLVFRSGKI 66
Query: 151 VITGAKAREQIYAAFNNIYPVLN 173
V TGA + E ++AA + ++ L+
Sbjct: 67 VCTGADSVEGVHAALDILFEELS 89
>gi|448610180|ref|ZP_21661030.1| transcription factor [Haloferax mucosum ATCC BAA-1512]
gi|445745539|gb|ELZ97006.1| transcription factor [Haloferax mucosum ATCC BAA-1512]
Length = 189
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 96/164 (58%), Gaps = 2/164 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+VA+ + +LDL+ +++ A+Y+P F + R ++PK +LIF SGKIVCTGA
Sbjct: 13 IQNVVASTAVGQELDLESLSMDLVGADYDPDNFPGLVYRTQDPKAASLIFRSGKIVCTGA 72
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
S A + + K+G P + + IQNIV S D+ + L L G
Sbjct: 73 SSVDDVDRALEQVFGELSKLGIPTDDREEATIQNIVSSADLGTTLNLNALAIGLGLEDVE 132
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFN 166
YEPE FPGL+YR++ P+V +L+F SGK+VITGAK E A N
Sbjct: 133 YEPEQFPGLVYRIEDPSVVVLMFGSGKIVITGAKQVEHAREAIN 176
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 89 QFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSG 148
+ + +IQN+V S V + LE L+ + + Y+P+ FPGL+YR + P LIF SG
Sbjct: 7 RLESLEIQNVVASTAVGQELDLESLS-MDLVGADYDPDNFPGLVYRTQDPKAASLIFRSG 65
Query: 149 KVVITGAKAREQIYAAFNNIYPVLN 173
K+V TGA + + + A ++ L+
Sbjct: 66 KIVCTGASSVDDVDRALEQVFGELS 90
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
IQNIV++ +L L+L +A L + EY P +F + RI++P L+F SGKIV T
Sbjct: 104 IQNIVSSADLGTTLNLNALAIGLGLEDVEYEPEQFPGLVYRIEDPSVVVLMFGSGKIVIT 163
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
GAK A+ A + +G
Sbjct: 164 GAKQVEHAREAINVVTDEIDALGL 187
>gi|126179334|ref|YP_001047299.1| transcription factor [Methanoculleus marisnigri JR1]
gi|125862128|gb|ABN57317.1| TATA binding protein of transcription factor TFIID [Methanoculleus
marisnigri JR1]
Length = 187
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 101/171 (59%), Gaps = 2/171 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVA+ + LDL +A ++AEYN RF V +R+++PK AL+F SGK+V TGA
Sbjct: 12 IENIVASAKVTDSLDLPSLASRLKDAEYNKKRFPGVVLRMQDPKIAALVFGSGKVVLTGA 71
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS + A ++ + + + ++KIQNIV S D+ PI L ++ GF+
Sbjct: 72 KSIDNLSRGLQILADQLRALDIDIPENPEYKIQNIVTSADLGTPINLNKIAVGFNLDKIE 131
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
YEPE FPGL+YR+ P V +L+F SGK++ITG K E A I L+
Sbjct: 132 YEPEQFPGLVYRLDDPKVVVLLFGSGKLIITGGKVPEDAQRAVKRILSELS 182
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIAL--HARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
IQNIV + +L ++L KIA+ + EY P +F + R+ +PK L+F SGK++ T
Sbjct: 103 IQNIVTSADLGTPINLNKIAVGFNLDKIEYEPEQFPGLVYRLDDPKVVVLLFGSGKLIIT 162
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
G K A+ A ++ + +G
Sbjct: 163 GGKVPEDAQRAVKRILSELSSLGL 186
>gi|170291079|ref|YP_001737895.1| TATA-box binding family protein [Candidatus Korarchaeum cryptofilum
OPF8]
gi|170175159|gb|ACB08212.1| TATA-box binding family protein [Candidatus Korarchaeum cryptofilum
OPF8]
Length = 211
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 99/169 (58%), Gaps = 2/169 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+V++ ++ +LDL +I+ + + Y+P +F + ++I EPK L+FSSGK VCTG
Sbjct: 35 IQNVVSSADIRQRLDLHEISRRIKKSRYDPEKFPGLVLKIDEPKAALLLFSSGKFVCTGT 94
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDF-KIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KS ++ A ++QK G V+ + K +NIV S + + +ERL + Y
Sbjct: 95 KSVEESAKAINAAIEVLQKHGIEVKGRPLIKAENIVASAKLHVKVDIERL-ALELENTLY 153
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPE FPGLI+RMK P+V LIF SG +V TGAK + A + +L
Sbjct: 154 EPEQFPGLIFRMKDPDVVFLIFASGSLVCTGAKKESDVRRAVYKLRDIL 202
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 51/83 (61%)
Query: 6 QNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAK 65
+NIVA+ L K+D++++AL N Y P +F + R+K+P LIF+SG +VCTGAK
Sbjct: 127 ENIVASAKLHVKVDIERLALELENTLYEPEQFPGLIFRMKDPDVVFLIFASGSLVCTGAK 186
Query: 66 SESQAKLAARKYARIVQKIGFPV 88
ES + A K I+ + G+ V
Sbjct: 187 KESDVRRAVYKLRDILARKGYLV 209
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 81 VQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNV 140
+Q+I ++ + IQN+V S D+ + L ++ S Y+PE FPGL+ ++ +P
Sbjct: 21 IQRILKNIREPEIAIQNVVSSADIRQRLDLHEISR-RIKKSRYDPEKFPGLVLKIDEPKA 79
Query: 141 TMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
+L+F SGK V TG K+ E+ A N VL +
Sbjct: 80 ALLLFSSGKFVCTGTKSVEESAKAINAAIEVLQKH 114
>gi|392522751|gb|AFM78164.1| TATA box-binding protein, partial [uncultured diatom]
Length = 114
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/113 (54%), Positives = 84/113 (74%), Gaps = 1/113 (0%)
Query: 36 RFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGF-PVQFKDFK 94
RF+AV MR++EP+ TALIF+SGK+ TG KS + LA++K+A IV K+GF P DFK
Sbjct: 2 RFAAVIMRLREPRATALIFASGKMCVTGTKSVHNSTLASKKFAYIVDKVGFKPKDEIDFK 61
Query: 95 IQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLS 147
+QN+VG+ DV FP +LE L H+ F++YEPELFPGLIYR+ +P V L+ +S
Sbjct: 62 VQNMVGTLDVGFPNRLEGLVYAHSTFASYEPELFPGLIYRLYEPKVVFLVSVS 114
>gi|288559645|ref|YP_003423131.1| TATA-box binding protein Tbp [Methanobrevibacter ruminantium M1]
gi|288542355|gb|ADC46239.1| TATA-box binding protein Tbp [Methanobrevibacter ruminantium M1]
Length = 181
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 102/165 (61%), Gaps = 4/165 (2%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVA+ ++ + L ++A ++N +F + ++++PKT ALIFSSGK+VCTGA
Sbjct: 8 IENIVASASIGKDIVLTEVAKALEGVDFNREQFPGLVFKLQDPKTAALIFSSGKLVCTGA 67
Query: 65 KSESQAKLAARKYARIVQKIG--FPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
KS +KLA +K +++ I P +F D KIQNIV S +++ + LE + +
Sbjct: 68 KSIDDSKLAIKKTVDLMRTIDTEIPHEF-DIKIQNIVASANLQSTLNLEAV-ALELENTE 125
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNN 167
YEPE FPGL+YR+ P V +L+F SGKVV TGAK ++ N
Sbjct: 126 YEPEQFPGLVYRLSDPKVVLLLFGSGKVVCTGAKTKQDARLGVEN 170
>gi|333910819|ref|YP_004484552.1| TATA-box-binding protein [Methanotorris igneus Kol 5]
gi|333751408|gb|AEF96487.1| TATA-box-binding protein [Methanotorris igneus Kol 5]
Length = 181
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 101/175 (57%), Gaps = 4/175 (2%)
Query: 1 MAPVIQ--NIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGK 58
M P I+ N+V + + +DL++ AL NAEY P +F + R+ +PK LIF SGK
Sbjct: 1 MEPKIKIVNVVVSTQIGSDIDLEEAALILDNAEYEPEQFPGLVCRLSDPKVALLIFRSGK 60
Query: 59 IVCTGAKSESQAKLAARKYARIVQKIGFP-VQFKDFKIQNIVGSCDVEFPIKLERLNGFH 117
+ CTGAKS+ +A++A +K + ++ G + + K+QN+V + D+ L+ +
Sbjct: 61 VNCTGAKSKEEAEVAIKKIIKELKDAGMDIIDNPEVKVQNMVATADLGIEPNLDDI-ALM 119
Query: 118 AMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
+ YEPE FPGL+YR+ P V +LIF SGKVVITG K E A N I L
Sbjct: 120 IEGTEYEPEQFPGLVYRLDDPKVVVLIFGSGKVVITGLKREEDAEIALNKILETL 174
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
+QN+VAT +L + +L IAL EY P +F + R+ +PK LIF SGK+V TG
Sbjct: 98 VQNMVATADLGIEPNLDDIALMIEGTEYEPEQFPGLVYRLDDPKVVVLIFGSGKVVITGL 157
Query: 65 KSESQAKLAARKYARIVQKI 84
K E A++A K +++I
Sbjct: 158 KREEDAEIALNKILETLREI 177
>gi|304313987|ref|YP_003849134.1| TATA-box binding protein [Methanothermobacter marburgensis str.
Marburg]
gi|302587446|gb|ADL57821.1| TATA-box binding protein [Methanothermobacter marburgensis str.
Marburg]
Length = 181
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 100/158 (63%), Gaps = 4/158 (2%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVA+ L +DL+ +A N ++N +F + ++KEPKT ALIF SGK+VCTGA
Sbjct: 8 IENIVASATLGKSIDLQTVAEALENVDFNREQFPGLVYKLKEPKTAALIFGSGKLVCTGA 67
Query: 65 KSESQAKLAARKYARIVQKI--GFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
KS +K A + +++ + P +F + KIQNIV S ++ P+ LE + +
Sbjct: 68 KSIEDSKRAIKLTVDMMRTMDPDIPEEF-EIKIQNIVASANLGKPLNLEAV-ALGLENTE 125
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQ 160
YEPE FPGL+YR+ +P V +L+F SGKVV TGAK+ E
Sbjct: 126 YEPEQFPGLVYRLDEPKVVLLLFGSGKVVCTGAKSAED 163
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQNIVA+ NL L+L+ +AL N EY P +F + R+ EPK L+F SGK+VCTGA
Sbjct: 99 IQNIVASANLGKPLNLEAVALGLENTEYEPEQFPGLVYRLDEPKVVLLLFGSGKVVCTGA 158
Query: 65 KSESQAKLAARKY-ARIVQ 82
KS AKL K AR+ +
Sbjct: 159 KSAEDAKLGVEKTKARLAE 177
>gi|307352931|ref|YP_003893982.1| TATA-box binding family protein [Methanoplanus petrolearius DSM
11571]
gi|307156164|gb|ADN35544.1| TATA-box binding family protein [Methanoplanus petrolearius DSM
11571]
Length = 186
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 106/174 (60%), Gaps = 8/174 (4%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVA+ + +LDL+ I ++AEYN RF V +R++EPK AL+F SGK+V TGA
Sbjct: 11 IENIVASAKVAKELDLQMINEKIKDAEYNKKRFPGVVLRMQEPKIAALVFGSGKVVLTGA 70
Query: 65 KS-ESQAK---LAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLN-GFHAM 119
KS +S +K + K + K+ P ++K+QNIV S D+ PI L ++ GF+
Sbjct: 71 KSIDSLSKGLDILGDKLREL--KLDIPKNL-EYKVQNIVTSADLGTPINLNKIAVGFNLE 127
Query: 120 FSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
YEPE FPGL+YR+ +P V +L+F SGK++ITG K E A I L+
Sbjct: 128 RIEYEPEQFPGLVYRLDEPKVVVLLFGSGKLIITGGKQPEDAKKAVQKILSDLS 181
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIAL--HARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIV + +L ++L KIA+ + EY P +F + R+ EPK L+F SGK++ T
Sbjct: 102 VQNIVTSADLGTPINLNKIAVGFNLERIEYEPEQFPGLVYRLDEPKVVVLLFGSGKLIIT 161
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
G K AK A +K + +G
Sbjct: 162 GGKQPEDAKKAVQKILSDLSNLGL 185
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
KI+NIV S V + L+ +N + Y + FPG++ RM++P + L+F SGKVV+
Sbjct: 9 LKIENIVASAKVAKELDLQMIN-EKIKDAEYNKKRFPGVVLRMQEPKIAALVFGSGKVVL 67
Query: 153 TGAKAREQIYAAFN 166
TGAK+ + + +
Sbjct: 68 TGAKSIDSLSKGLD 81
>gi|448621885|ref|ZP_21668634.1| transcription factor [Haloferax denitrificans ATCC 35960]
gi|445754915|gb|EMA06309.1| transcription factor [Haloferax denitrificans ATCC 35960]
Length = 188
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 94/166 (56%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+VA+ + +LDL++++L +Y+P F + R ++PK+ L+F SGKIVCTGA
Sbjct: 12 IQNVVASTEVPLELDLERLSLDMDGTDYDPENFPGLVYRTRDPKSACLVFRSGKIVCTGA 71
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
S A +G P+ + D +QNIV S D+ + L L G
Sbjct: 72 NSVGDVSTAIETLFGEFADLGVPIPDEPDITVQNIVSSADLGAALNLNALAIGLGLEAVE 131
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ +P+V +L+F SGK+VITGAK AA +
Sbjct: 132 YEPEQFPGLVYRLDEPSVVVLMFGSGKIVITGAKQVADAEAALETV 177
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
+IQN+V S +V + LERL+ + Y+PE FPGL+YR + P L+F SGK+V
Sbjct: 10 IEIQNVVASTEVPLELDLERLS-LDMDGTDYDPENFPGLVYRTRDPKSACLVFRSGKIVC 68
Query: 153 TGAKAREQIYAAFNNIY 169
TGA + + A ++
Sbjct: 69 TGANSVGDVSTAIETLF 85
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIV++ +L L+L +A L EY P +F + R+ EP L+F SGKIV T
Sbjct: 103 VQNIVSSADLGAALNLNALAIGLGLEAVEYEPEQFPGLVYRLDEPSVVVLMFGSGKIVIT 162
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
GAK + A+ A V+++G
Sbjct: 163 GAKQVADAEAALETVDEDVRELGL 186
>gi|408406051|ref|YP_006864035.1| TATA-box-binding protein [Candidatus Nitrososphaera gargensis
Ga9.2]
gi|408366647|gb|AFU60377.1| TATA-box-binding protein [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 187
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/169 (42%), Positives = 101/169 (59%), Gaps = 2/169 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + ++L I + EY+P +F + R++ PKT LIFSSGK+VCTGA
Sbjct: 10 IENVVASATVNQTVNLNLITQIFPDVEYHPDQFPGLVFRLRSPKTATLIFSSGKMVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KSE A A + ++K G P++ + +IQNIV S + I LE L S Y
Sbjct: 70 KSEKMAIQAVKNVVLKLKKGGIPLEHEPQIEIQNIVASASLGGKIHLE-LAARVLPRSMY 128
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPE FPGLI+RM P +L+F SGK+V TGAK ++Y A N++ +L
Sbjct: 129 EPEQFPGLIHRMLDPKTVILLFASGKLVCTGAKKESEVYRAVGNLHTLL 177
>gi|15679622|ref|NP_276739.1| transcription factor [Methanothermobacter thermautotrophicus str.
Delta H]
gi|6647868|sp|O27664.1|TBP_METTH RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|2622753|gb|AAB86100.1| TATA-binding transcription initiation factor [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 181
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 99/158 (62%), Gaps = 4/158 (2%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVA+ L +DL+ +A N ++N +F + ++KEPKT ALIF SGK+VCTGA
Sbjct: 8 IENIVASATLGKSIDLQTVAEALENVDFNREQFPGLVYKLKEPKTAALIFGSGKLVCTGA 67
Query: 65 KSESQAKLAARKYARIVQKI--GFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
KS +K A + +++ + P +F + KIQNIV S ++ P+ LE + +
Sbjct: 68 KSIEDSKRAIKLTVDMMRTMDPDIPEEF-EIKIQNIVASANLGKPLNLEAV-ALGLENTE 125
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQ 160
YEPE FPGL+YR+ P V +L+F SGKVV TGAK+ E
Sbjct: 126 YEPEQFPGLVYRLDDPKVVLLLFGSGKVVCTGAKSAED 163
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQNIVA+ NL L+L+ +AL N EY P +F + R+ +PK L+F SGK+VCTGA
Sbjct: 99 IQNIVASANLGKPLNLEAVALGLENTEYEPEQFPGLVYRLDDPKVVLLLFGSGKVVCTGA 158
Query: 65 KSESQAKLAARKY-ARIVQ 82
KS AKL K AR+ +
Sbjct: 159 KSAEDAKLGVEKTKARLAE 177
>gi|448577353|ref|ZP_21642983.1| transcription factor [Haloferax larsenii JCM 13917]
gi|445727998|gb|ELZ79607.1| transcription factor [Haloferax larsenii JCM 13917]
Length = 188
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 95/164 (57%), Gaps = 2/164 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+VA+ + +LDL+ ++ AE+NP F + R ++P+ LIF SGKIVCTGA
Sbjct: 12 IQNVVASSAVGLELDLESLSDDVPGAEFNPDNFPGLVYRTQDPRAANLIFRSGKIVCTGA 71
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
S + A + + +G P+ + + +QNIV S D+ + L L G
Sbjct: 72 SSVDEVNQALEQVFEELGSLGIPIDGREEATVQNIVSSADLGTTLNLNALAIGLGLEHVE 131
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFN 166
YEPE FPGL+YR+ +PNV +L+F SGK+VITGAK E A N
Sbjct: 132 YEPEQFPGLVYRIDEPNVVVLLFGSGKIVITGAKKVEYAREAIN 175
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 89 QFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSG 148
+ +IQN+V S V + LE L+ + + P+ FPGL+YR + P LIF SG
Sbjct: 6 RLDSLEIQNVVASSAVGLELDLESLSD-DVPGAEFNPDNFPGLVYRTQDPRAANLIFRSG 64
Query: 149 KVVITGAKAREQIYAAFNNIYPVLN 173
K+V TGA + +++ A ++ L
Sbjct: 65 KIVCTGASSVDEVNQALEQVFEELG 89
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIV++ +L L+L +A L + EY P +F + RI EP L+F SGKIV T
Sbjct: 103 VQNIVSSADLGTTLNLNALAIGLGLEHVEYEPEQFPGLVYRIDEPNVVVLLFGSGKIVIT 162
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
GAK A+ A + ++ +G
Sbjct: 163 GAKKVEYAREAINVVSDEIESLGL 186
>gi|452055842|gb|AGF92132.1| TATA box-binding protein, partial [Scophthalmus maximus]
Length = 72
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/72 (79%), Positives = 67/72 (93%)
Query: 29 NAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGFPV 88
NAEYNP RF+AV MRI+EP+TTALIFSSGK+VCTGAKSE Q++LAARKYAR+VQK+GFP
Sbjct: 1 NAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPA 60
Query: 89 QFKDFKIQNIVG 100
+F DFKIQN+VG
Sbjct: 61 KFLDFKIQNMVG 72
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQ 160
+ Y P+ F +I R+++P T LIF SGK+V TGAK+ EQ
Sbjct: 2 AEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQ 41
>gi|448603976|ref|ZP_21657400.1| transcription factor [Haloferax sulfurifontis ATCC BAA-897]
gi|445744772|gb|ELZ96244.1| transcription factor [Haloferax sulfurifontis ATCC BAA-897]
Length = 188
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 94/166 (56%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+VA+ + +LDL++++L +Y+P F + R ++PK+ L+F SGKIVCTGA
Sbjct: 12 IQNVVASTEVPLELDLERLSLDMDGTDYDPENFPGLVYRTRDPKSACLVFRSGKIVCTGA 71
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
S A +G P+ + D +QNIV S D+ + L L G
Sbjct: 72 NSVGDVSTAIETLFGEFADLGVPIPDEPDITVQNIVSSADLGAALNLNALAIGLGLEAVE 131
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ +P+V +L+F SGK+VITGAK AA +
Sbjct: 132 YEPEQFPGLVYRLDEPSVVVLMFGSGKIVITGAKRVADAEAALETV 177
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
+IQN+V S +V + LERL+ + Y+PE FPGL+YR + P L+F SGK+V
Sbjct: 10 IEIQNVVASTEVPLELDLERLS-LDMDGTDYDPENFPGLVYRTRDPKSACLVFRSGKIVC 68
Query: 153 TGAKAREQIYAAFNNIY 169
TGA + + A ++
Sbjct: 69 TGANSVGDVSTAIETLF 85
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIV++ +L L+L +A L EY P +F + R+ EP L+F SGKIV T
Sbjct: 103 VQNIVSSADLGAALNLNALAIGLGLEAVEYEPEQFPGLVYRLDEPSVVVLMFGSGKIVIT 162
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
GAK + A+ A V+++G
Sbjct: 163 GAKRVADAEAALETVDEDVRELGL 186
>gi|227827548|ref|YP_002829328.1| transcription factor [Sulfolobus islandicus M.14.25]
gi|227830235|ref|YP_002832015.1| transcription factor [Sulfolobus islandicus L.S.2.15]
gi|229579050|ref|YP_002837448.1| transcription factor [Sulfolobus islandicus Y.G.57.14]
gi|229582199|ref|YP_002840598.1| transcription factor [Sulfolobus islandicus Y.N.15.51]
gi|229584751|ref|YP_002843253.1| transcription factor [Sulfolobus islandicus M.16.27]
gi|238619705|ref|YP_002914531.1| transcription factor [Sulfolobus islandicus M.16.4]
gi|284997658|ref|YP_003419425.1| TATA-box binding protein [Sulfolobus islandicus L.D.8.5]
gi|385773217|ref|YP_005645783.1| TATA-box binding family protein [Sulfolobus islandicus HVE10/4]
gi|385775851|ref|YP_005648419.1| TATA-box binding family protein [Sulfolobus islandicus REY15A]
gi|227456683|gb|ACP35370.1| TATA-box binding family protein [Sulfolobus islandicus L.S.2.15]
gi|227459344|gb|ACP38030.1| TATA-box binding family protein [Sulfolobus islandicus M.14.25]
gi|228009764|gb|ACP45526.1| TATA-box binding family protein [Sulfolobus islandicus Y.G.57.14]
gi|228012915|gb|ACP48676.1| TATA-box binding family protein [Sulfolobus islandicus Y.N.15.51]
gi|228019801|gb|ACP55208.1| TATA-box binding family protein [Sulfolobus islandicus M.16.27]
gi|238380775|gb|ACR41863.1| TATA-box binding family protein [Sulfolobus islandicus M.16.4]
gi|284445553|gb|ADB87055.1| TATA-box binding protein [Sulfolobus islandicus L.D.8.5]
gi|323474599|gb|ADX85205.1| TATA-box binding family protein [Sulfolobus islandicus REY15A]
gi|323477331|gb|ADX82569.1| TATA-box binding family protein [Sulfolobus islandicus HVE10/4]
Length = 181
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 100/165 (60%), Gaps = 2/165 (1%)
Query: 9 VATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKSES 68
+AT+ LE LDL + N EY+P +F + R+++PK TALIF SGK+V TGAKS
Sbjct: 1 MATVTLEQSLDLYAMERSIPNIEYDPDQFPGLIFRLEQPKVTALIFKSGKMVVTGAKSTE 60
Query: 69 QAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPEL 127
+ A ++ + ++K G + K +IQNIV S ++ + L++ F + YEPE
Sbjct: 61 ELIKAVKRIIKTLKKYGIKIMGKPKIQIQNIVASANLHVNVNLDK-AAFLLENNMYEPEQ 119
Query: 128 FPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
FPGLI+RM P V +LIF SGK+VITGAK +++ A I+ L
Sbjct: 120 FPGLIFRMDDPRVVLLIFSSGKMVITGAKREDEVSKAVKRIFDKL 164
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQNIVA+ NL ++L K A N Y P +F + R+ +P+ LIFSSGK+V TGA
Sbjct: 88 IQNIVASANLHVNVNLDKAAFLLENNMYEPEQFPGLIFRMDDPRVVLLIFSSGKMVITGA 147
Query: 65 KSESQAKLAARK 76
K E + A ++
Sbjct: 148 KREDEVSKAVKR 159
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 38/53 (71%)
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
Y+P+ FPGLI+R+++P VT LIF SGK+V+TGAK+ E++ A I L Y
Sbjct: 24 YDPDQFPGLIFRLEQPKVTALIFKSGKMVVTGAKSTEELIKAVKRIIKTLKKY 76
>gi|310752315|gb|ADP09476.1| TATA-box binding protein [uncultured marine crenarchaeote E48-1C]
Length = 186
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 99/163 (60%), Gaps = 2/163 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ L K+DL + EY P +F + R+K PKT LIF+SGK+VCTGA
Sbjct: 10 IENVVASATLNQKVDLNAVVKSYPIVEYRPEQFPGLVFRLKRPKTATLIFNSGKMVCTGA 69
Query: 65 KSESQAKLAARKYAR-IVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KSE +A+ A +K + + + + + KIQNIV S ++ I LE + + Y
Sbjct: 70 KSEKEARRAVKKVIKELKKGGIIIIGKPELKIQNIVASANLGGMIDLE-ASTLSLKKTMY 128
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFN 166
EPE FPGLIYRM +P V +L+F SGK+V TGAK + +Y A +
Sbjct: 129 EPEQFPGLIYRMAEPKVVILLFASGKLVCTGAKREQNVYDAVH 171
>gi|374628586|ref|ZP_09700971.1| TATA binding protein of transcription factor TFIID [Methanoplanus
limicola DSM 2279]
gi|373906699|gb|EHQ34803.1| TATA binding protein of transcription factor TFIID [Methanoplanus
limicola DSM 2279]
Length = 186
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 100/163 (61%), Gaps = 4/163 (2%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVA+ + +LDL+ I ++AEYN RF V +R+++PK AL+F SGK+V TGA
Sbjct: 11 IENIVASAKVADELDLQMINEEIKDAEYNKKRFPGVVLRMQDPKIAALVFGSGKVVLTGA 70
Query: 65 KSESQAKLAARKYARIVQ--KIGFPVQFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFS 121
KS ++ K+ P ++K+QNIV S D+ PI L ++ GF+
Sbjct: 71 KSIDNLSRGLEILGEKLRALKLDIPTNL-EYKVQNIVTSADLGSPINLNKIAVGFNLDRI 129
Query: 122 TYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAA 164
YEPE FPGL+YR+++P V +L+F SGK++ITG K + AA
Sbjct: 130 EYEPEQFPGLVYRLEEPKVVVLLFGSGKLIITGGKETKDAKAA 172
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIAL--HARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIV + +L ++L KIA+ + EY P +F + R++EPK L+F SGK++ T
Sbjct: 102 VQNIVTSADLGSPINLNKIAVGFNLDRIEYEPEQFPGLVYRLEEPKVVVLLFGSGKLIIT 161
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
G K AK A K + +G
Sbjct: 162 GGKETKDAKAAVIKIMSDLSNLGL 185
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
KI+NIV S V + L+ +N + Y + FPG++ RM+ P + L+F SGKVV+
Sbjct: 9 LKIENIVASAKVADELDLQMIN-EEIKDAEYNKKRFPGVVLRMQDPKIAALVFGSGKVVL 67
Query: 153 TGAKAREQI 161
TGAK+ + +
Sbjct: 68 TGAKSIDNL 76
>gi|148642780|ref|YP_001273293.1| transcription factor [Methanobrevibacter smithii ATCC 35061]
gi|222445725|ref|ZP_03608240.1| hypothetical protein METSMIALI_01367 [Methanobrevibacter smithii
DSM 2375]
gi|261349727|ref|ZP_05975144.1| TATA-box-binding protein [Methanobrevibacter smithii DSM 2374]
gi|166227821|sp|A5UL47.1|TBP_METS3 RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|148551797|gb|ABQ86925.1| transcription initiation factor TFIID TATA binding protein
[Methanobrevibacter smithii ATCC 35061]
gi|222435290|gb|EEE42455.1| transcription factor [Methanobrevibacter smithii DSM 2375]
gi|288861682|gb|EFC93980.1| TATA-box-binding protein [Methanobrevibacter smithii DSM 2374]
Length = 181
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 102/171 (59%), Gaps = 4/171 (2%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVA+ ++ + L +++ +N +F + ++K+PKT ALIFSSGK+VCTGA
Sbjct: 8 IENIVASASIGKDIVLTEVSEALEGVNFNREQFPGLVFKLKDPKTAALIFSSGKLVCTGA 67
Query: 65 KSESQAKLAARKYARIVQKIG--FPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
KS +KLA +K +++ I P +F + KIQNIV S ++E + LE + +
Sbjct: 68 KSIDDSKLAIKKTVDLMRTIDTEIPHEF-EIKIQNIVASANLESTLNLEAV-ALELEDTE 125
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
YEPE FPGL+YR+ P V +L+F SGKVV TGAK R Y L+
Sbjct: 126 YEPEQFPGLVYRLSDPKVVLLLFGSGKVVCTGAKTRSDAKLGVERAYDRLS 176
>gi|374636062|ref|ZP_09707646.1| TATA-box binding family protein [Methanotorris formicicus Mc-S-70]
gi|373560320|gb|EHP86587.1| TATA-box binding family protein [Methanotorris formicicus Mc-S-70]
Length = 188
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 100/175 (57%), Gaps = 4/175 (2%)
Query: 1 MAPVIQ--NIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGK 58
M P I+ N+V + + +DL++ AL NAEY P +F + R+ EPK LIF SGK
Sbjct: 8 MEPKIKIVNVVVSTQIGSDIDLEEAALILDNAEYEPEQFPGLVCRLSEPKVALLIFRSGK 67
Query: 59 IVCTGAKSESQAKLAARKYARIVQKIGFP-VQFKDFKIQNIVGSCDVEFPIKLERLNGFH 117
+ CTGAKS+ +A++A +K + ++ G + + K+QN+V + D+ L+ +
Sbjct: 68 VNCTGAKSKEEAEVAIKKIIKELKDAGMDIIDDPEVKVQNMVATADLGIEPNLDDI-ALM 126
Query: 118 AMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
+ YEPE FPGL+YR+ P V +LIF SGKVVITG K A N I L
Sbjct: 127 IEGTEYEPEQFPGLVYRLDDPKVVVLIFGSGKVVITGLKKEGDAEIALNKILETL 181
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
+QN+VAT +L + +L IAL EY P +F + R+ +PK LIF SGK+V TG
Sbjct: 105 VQNMVATADLGIEPNLDDIALMIEGTEYEPEQFPGLVYRLDDPKVVVLIFGSGKVVITGL 164
Query: 65 KSESQAKLAARKYARIVQKI 84
K E A++A K +++I
Sbjct: 165 KKEGDAEIALNKILETLREI 184
>gi|448568567|ref|ZP_21638101.1| transcription factor [Haloferax lucentense DSM 14919]
gi|445725917|gb|ELZ77535.1| transcription factor [Haloferax lucentense DSM 14919]
Length = 188
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 93/166 (56%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+VA+ + +LDL++++L +Y+P F + R + PK+ L+F SGK+VCTGA
Sbjct: 12 IQNVVASTEVPVELDLERLSLDMNGTDYDPENFPGLVYRTRNPKSACLVFRSGKVVCTGA 71
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
S A ++G P+ D +QNIV S D+ + L L G
Sbjct: 72 DSVDDVSTAIETLFDEFTELGIPIPDDPDITVQNIVSSADLGAALNLNALAIGLGLEAVE 131
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ +P+V +L+F SGK+VITGAK AA +
Sbjct: 132 YEPEQFPGLVYRLDEPSVVVLMFGSGKIVITGAKRVGDAEAALETV 177
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
+IQN+V S +V + LERL+ + Y+PE FPGL+YR + P L+F SGKVV
Sbjct: 10 IEIQNVVASTEVPVELDLERLS-LDMNGTDYDPENFPGLVYRTRNPKSACLVFRSGKVVC 68
Query: 153 TGAKAREQIYAAFNNIY 169
TGA + + + A ++
Sbjct: 69 TGADSVDDVSTAIETLF 85
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIV++ +L L+L +A L EY P +F + R+ EP L+F SGKIV T
Sbjct: 103 VQNIVSSADLGAALNLNALAIGLGLEAVEYEPEQFPGLVYRLDEPSVVVLMFGSGKIVIT 162
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
GAK A+ A V+++G
Sbjct: 163 GAKRVGDAEAALETVDDDVRELGL 186
>gi|433425962|ref|ZP_20406798.1| transcription factor [Haloferax sp. BAB2207]
gi|448594544|ref|ZP_21652891.1| transcription factor [Haloferax alexandrinus JCM 10717]
gi|432197431|gb|ELK53812.1| transcription factor [Haloferax sp. BAB2207]
gi|445744180|gb|ELZ95659.1| transcription factor [Haloferax alexandrinus JCM 10717]
Length = 188
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 93/166 (56%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+VA+ + +LDL++++L +Y+P F + R + PK+ L+F SGK+VCTGA
Sbjct: 12 IQNVVASTEVPVELDLERLSLDMNGTDYDPENFPGLVYRTRNPKSACLVFRSGKVVCTGA 71
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
S A ++G P+ D +QNIV S D+ + L L G
Sbjct: 72 DSVDDVSTAIETLFDEFTELGIPIPDDPDVTVQNIVSSADLGAALNLNALAIGLGLEAVE 131
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ +P+V +L+F SGK+VITGAK AA +
Sbjct: 132 YEPEQFPGLVYRLDEPSVVVLMFGSGKIVITGAKRVGDAEAALETV 177
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
+IQN+V S +V + LERL+ + Y+PE FPGL+YR + P L+F SGKVV
Sbjct: 10 IEIQNVVASTEVPVELDLERLS-LDMNGTDYDPENFPGLVYRTRNPKSACLVFRSGKVVC 68
Query: 153 TGAKAREQIYAAFNNIY 169
TGA + + + A ++
Sbjct: 69 TGADSVDDVSTAIETLF 85
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIV++ +L L+L +A L EY P +F + R+ EP L+F SGKIV T
Sbjct: 103 VQNIVSSADLGAALNLNALAIGLGLEAVEYEPEQFPGLVYRLDEPSVVVLMFGSGKIVIT 162
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
GAK A+ A V+++G
Sbjct: 163 GAKRVGDAEAALETVDDDVRELGL 186
>gi|393796700|ref|ZP_10380064.1| 2-alkenal reductase [Candidatus Nitrosoarchaeum limnia BG20]
Length = 187
Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 106/180 (58%), Gaps = 6/180 (3%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I N+VA+ ++ K DL I + EY+P +F + R+K PKT LIF +GK+VCTG+
Sbjct: 10 IVNVVASATVDQKFDLNDITKKFPDTEYHPDQFPGLVFRLKNPKTATLIFRTGKMVCTGS 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKD--FKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
KSE A+ A + + ++K G V+ KD +QNIV S ++ + LE+ S
Sbjct: 70 KSEEMARSAVKTVVQKLRKEGVKVK-KDAVVTVQNIVASINLGGKVHLEKA-ARTLPRSM 127
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNV--YVTYDQ 180
YEPE FPGLI+RM P +LIF SGK+V TGAK ++ + +N++ +L + YDQ
Sbjct: 128 YEPEQFPGLIHRMLDPKTVILIFSSGKLVCTGAKNESDVFRSVHNLHSLLEEKGLMVYDQ 187
>gi|448417264|ref|ZP_21579282.1| transcription factor [Halosarcina pallida JCM 14848]
gi|445678487|gb|ELZ30980.1| transcription factor [Halosarcina pallida JCM 14848]
Length = 187
Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 99/177 (55%), Gaps = 2/177 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +LDL+ +A+ A+Y+P +F + R +EPK+ ALIF SGKIVCTGA
Sbjct: 10 IENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQEPKSAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS + ++ + PV+ + +QNIV S D+ + L + G
Sbjct: 70 KSTDDVHESLELVFEKLRALQIPVEDDPEITVQNIVTSADLGRDLNLNAIAIGLGLENIE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYD 179
YEPE FPGL+YR+ P+V L+F SGK+VITG K A + I L+ YD
Sbjct: 130 YEPEQFPGLVYRLDSPDVVALLFGSGKLVITGGKQPSDAEKAVDEIVSRLSDLGLYD 186
>gi|110668436|ref|YP_658247.1| transcription factor [Haloquadratum walsbyi DSM 16790]
gi|385803899|ref|YP_005840299.1| TATA-binding transcription initiation factor [Haloquadratum walsbyi
C23]
gi|109626183|emb|CAJ52639.1| TATA-binding transcription initiation factor [Haloquadratum walsbyi
DSM 16790]
gi|339729391|emb|CCC40639.1| TATA-binding transcription initiation factor [Haloquadratum walsbyi
C23]
Length = 186
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 94/166 (56%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+VA+ + +LDL+ +A A++NP F + R +EPK ALIF SGKIVCTGA
Sbjct: 10 IQNVVASTGIGQELDLEALAEDLPGADFNPDNFPGLVYRTQEPKAAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS + A ++ + PV + + +QNIV S D+ + L L G
Sbjct: 70 KSINDVHDALGIIFEKLRGLSIPVDEDPEITVQNIVSSADLGHTLNLNALAIGLGLEDVE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YRM +P V +L+F SGK+VITG K AA I
Sbjct: 130 YEPEQFPGLVYRMDQPEVVILLFGSGKIVITGGKQTNDAAAAVEEI 175
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIV++ +L L+L +A L + EY P +F + R+ +P+ L+F SGKIV T
Sbjct: 101 VQNIVSSADLGHTLNLNALAIGLGLEDVEYEPEQFPGLVYRMDQPEVVILLFGSGKIVIT 160
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
G K + A A + ++ +G
Sbjct: 161 GGKQTNDAAAAVEEIVERIEDLGL 184
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
+IQN+V S + + LE L + + P+ FPGL+YR ++P LIF SGK+V
Sbjct: 8 IEIQNVVASTGIGQELDLEAL-AEDLPGADFNPDNFPGLVYRTQEPKAAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIY 169
TGAK+ ++ A I+
Sbjct: 67 TGAKSINDVHDALGIIF 83
>gi|15668684|ref|NP_247483.1| transcription factor [Methanocaldococcus jannaschii DSM 2661]
gi|2833518|sp|Q57930.1|TBP_METJA RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|1591210|gb|AAB98497.1| transcription initiation factor IID, TATA-box binding protein
[Methanocaldococcus jannaschii DSM 2661]
Length = 183
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 101/171 (59%), Gaps = 4/171 (2%)
Query: 1 MAPVIQ--NIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGK 58
M P I+ N+V + + +DL+++A+ NAEY P +F + R+ PK LIF SGK
Sbjct: 4 MEPEIKIVNVVVSTKIGDNIDLEEVAMILENAEYEPEQFPGLVCRLSVPKVALLIFRSGK 63
Query: 59 IVCTGAKSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLNGFH 117
+ CTGAKS+ +A++A +K + ++ G V + + KIQN+V + D+ L+ +
Sbjct: 64 VNCTGAKSKEEAEIAIKKIIKELKDAGIDVIENPEIKIQNMVATADLGIEPNLDDI-ALM 122
Query: 118 AMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
+ YEPE FPGL+YR+ P V +LIF SGKVVITG K+ E A I
Sbjct: 123 VEGTEYEPEQFPGLVYRLDDPKVVVLIFGSGKVVITGLKSEEDAKRALKKI 173
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 48/80 (60%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+VAT +L + +L IAL EY P +F + R+ +PK LIF SGK+V TG
Sbjct: 101 IQNMVATADLGIEPNLDDIALMVEGTEYEPEQFPGLVYRLDDPKVVVLIFGSGKVVITGL 160
Query: 65 KSESQAKLAARKYARIVQKI 84
KSE AK A +K ++++
Sbjct: 161 KSEEDAKRALKKILDTIKEV 180
>gi|197305019|pdb|2Z8U|A Chain A, Methanococcus Jannaschii Tbp
gi|197305020|pdb|2Z8U|B Chain B, Methanococcus Jannaschii Tbp
gi|197305021|pdb|2Z8U|P Chain P, Methanococcus Jannaschii Tbp
gi|197305022|pdb|2Z8U|Q Chain Q, Methanococcus Jannaschii Tbp
Length = 188
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 101/171 (59%), Gaps = 4/171 (2%)
Query: 1 MAPVIQ--NIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGK 58
M P I+ N+V + + +DL+++A+ NAEY P +F + R+ PK LIF SGK
Sbjct: 9 MEPEIKIVNVVVSTKIGDNIDLEEVAMILENAEYEPEQFPGLVCRLSVPKVALLIFRSGK 68
Query: 59 IVCTGAKSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLNGFH 117
+ CTGAKS+ +A++A +K + ++ G V + + KIQN+V + D+ L+ +
Sbjct: 69 VNCTGAKSKEEAEIAIKKIIKELKDAGIDVIENPEIKIQNMVATADLGIEPNLDDI-ALM 127
Query: 118 AMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
+ YEPE FPGL+YR+ P V +LIF SGKVVITG K+ E A I
Sbjct: 128 VEGTEYEPEQFPGLVYRLDDPKVVVLIFGSGKVVITGLKSEEDAKRALKKI 178
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 48/80 (60%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+VAT +L + +L IAL EY P +F + R+ +PK LIF SGK+V TG
Sbjct: 106 IQNMVATADLGIEPNLDDIALMVEGTEYEPEQFPGLVYRLDDPKVVVLIFGSGKVVITGL 165
Query: 65 KSESQAKLAARKYARIVQKI 84
KSE AK A +K ++++
Sbjct: 166 KSEEDAKRALKKILDTIKEV 185
>gi|389848878|ref|YP_006351115.1| TATA-binding transcription initiation factor [Haloferax
mediterranei ATCC 33500]
gi|448614622|ref|ZP_21663769.1| transcription factor [Haloferax mediterranei ATCC 33500]
gi|388246184|gb|AFK21128.1| TATA-binding transcription initiation factor [Haloferax
mediterranei ATCC 33500]
gi|445753956|gb|EMA05371.1| transcription factor [Haloferax mediterranei ATCC 33500]
Length = 188
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 91/166 (54%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
+QN+VA+ + +LDL +++L +Y+P F + R + PK L+F SGKIVCTGA
Sbjct: 12 VQNVVASTEVTLELDLDRLSLDMSGTDYDPENFPGLVYRTENPKAACLVFRSGKIVCTGA 71
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
S A + +G PV + +QNIV S D+ + L L G
Sbjct: 72 DSVEDVNTAIETLFDDLDDLGIPVPDDPNTTVQNIVSSADLGAALNLNALAIGLGLEDVE 131
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ PNV +L+F SGK+VITGA+A +A +
Sbjct: 132 YEPEQFPGLVYRLDDPNVVVLMFGSGKIVITGAEAVVDAESALETV 177
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 94 KIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVIT 153
++QN+V S +V + L+RL+ + Y+PE FPGL+YR + P L+F SGK+V T
Sbjct: 11 EVQNVVASTEVTLELDLDRLS-LDMSGTDYDPENFPGLVYRTENPKAACLVFRSGKIVCT 69
Query: 154 GAKAREQIYAAFNNIYPVLN 173
GA + E + A ++ L+
Sbjct: 70 GADSVEDVNTAIETLFDDLD 89
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIV++ +L L+L +A L + EY P +F + R+ +P L+F SGKIV T
Sbjct: 103 VQNIVSSADLGAALNLNALAIGLGLEDVEYEPEQFPGLVYRLDDPNVVVLMFGSGKIVIT 162
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
GA++ A+ A V+++G
Sbjct: 163 GAEAVVDAESALETVDGDVRELGL 186
>gi|256810655|ref|YP_003128024.1| transcription factor [Methanocaldococcus fervens AG86]
gi|256793855|gb|ACV24524.1| TATA-box binding family protein [Methanocaldococcus fervens AG86]
Length = 180
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 101/171 (59%), Gaps = 4/171 (2%)
Query: 1 MAPVIQ--NIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGK 58
M P I+ N+V + + +DL+++A+ NAEY P +F + R+ PK LIF SGK
Sbjct: 1 MEPEIKIVNVVVSTKIGDNIDLEEVAMILENAEYEPEQFPGLVCRLSVPKVALLIFRSGK 60
Query: 59 IVCTGAKSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLNGFH 117
+ CTGAKS+ +A++A +K + ++ G V + + KIQN+V + D+ L+ +
Sbjct: 61 VNCTGAKSKEEAEIAIKKIIKELKDAGIDVIENPEIKIQNMVATADLGIEPNLDDI-ALM 119
Query: 118 AMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
+ YEPE FPGL+YR+ P V +LIF SGKVVITG K+ E A I
Sbjct: 120 VEGTEYEPEQFPGLVYRLDDPKVVVLIFGSGKVVITGLKSEEDAKRALKKI 170
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 48/80 (60%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+VAT +L + +L IAL EY P +F + R+ +PK LIF SGK+V TG
Sbjct: 98 IQNMVATADLGIEPNLDDIALMVEGTEYEPEQFPGLVYRLDDPKVVVLIFGSGKVVITGL 157
Query: 65 KSESQAKLAARKYARIVQKI 84
KSE AK A +K ++++
Sbjct: 158 KSEEDAKRALKKILDTIREV 177
>gi|15897830|ref|NP_342435.1| transcription factor [Sulfolobus solfataricus P2]
gi|284175636|ref|ZP_06389605.1| transcription factor [Sulfolobus solfataricus 98/2]
gi|384434381|ref|YP_005643739.1| TATA-box binding family protein [Sulfolobus solfataricus 98/2]
gi|13814131|gb|AAK41225.1| TATA box binding protein, hypothetical (tfIID) [Sulfolobus
solfataricus P2]
gi|261602535|gb|ACX92138.1| TATA-box binding family protein [Sulfolobus solfataricus 98/2]
Length = 181
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 99/162 (61%), Gaps = 2/162 (1%)
Query: 9 VATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKSES 68
+AT+ LE LDL + N EY+P +F + R+++PK TALIF SGK+V TGAKS
Sbjct: 1 MATVTLEQSLDLYAMERSIPNIEYDPDQFPGLIFRLEQPKVTALIFKSGKMVVTGAKSTE 60
Query: 69 QAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPEL 127
+ A ++ + ++K G + K +IQNIV S ++ + L++ F + YEPE
Sbjct: 61 ELIKAVKRIIKTLKKYGIKIVGKPKIQIQNIVASANLHVNVNLDK-AAFLLENNMYEPEQ 119
Query: 128 FPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIY 169
FPGLI+RM P V +LIF SGK+VITGAK +++ A I+
Sbjct: 120 FPGLIFRMDDPRVVLLIFSSGKMVITGAKREDEVSKAVKRIF 161
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQNIVA+ NL ++L K A N Y P +F + R+ +P+ LIFSSGK+V TGA
Sbjct: 88 IQNIVASANLHVNVNLDKAAFLLENNMYEPEQFPGLIFRMDDPRVVLLIFSSGKMVITGA 147
Query: 65 KSESQAKLAARK 76
K E + A ++
Sbjct: 148 KREDEVSKAVKR 159
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 38/53 (71%)
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
Y+P+ FPGLI+R+++P VT LIF SGK+V+TGAK+ E++ A I L Y
Sbjct: 24 YDPDQFPGLIFRLEQPKVTALIFKSGKMVVTGAKSTEELIKAVKRIIKTLKKY 76
>gi|116753474|ref|YP_842592.1| transcription factor [Methanosaeta thermophila PT]
gi|121693723|sp|A0B5H8.1|TBP_METTP RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|116664925|gb|ABK13952.1| TATA binding protein of transcription factor TFIID [Methanosaeta
thermophila PT]
Length = 183
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 96/159 (60%), Gaps = 3/159 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ L + DL KI AEYN +F + R+K PK LIF+SGK+VCTGA
Sbjct: 7 IENVVASTKLADEFDLVKIESELEGAEYNKEKFPGLVYRVKSPKAAFLIFTSGKVVCTGA 66
Query: 65 KSESQAKLAARKYARIVQKIGFP-VQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFS 121
K+ + AR ++ IGF + + + +QNIV S D++ + L + G
Sbjct: 67 KNVEDVRTVITNMARTLKSIGFDNINLEPEIHVQNIVASADLKTDLNLNAIALGLGLENI 126
Query: 122 TYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQ 160
YEPE FPGL+YR+K+P V +LIF SGK+V+TG K+ E+
Sbjct: 127 EYEPEQFPGLVYRIKQPKVVVLIFSSGKLVVTGGKSPEE 165
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIALHA--RNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIVA+ +L+ L+L IAL N EY P +F + RIK+PK LIFSSGK+V T
Sbjct: 99 VQNIVASADLKTDLNLNAIALGLGLENIEYEPEQFPGLVYRIKQPKVVVLIFSSGKLVVT 158
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
G KS + + R + ++ +G
Sbjct: 159 GGKSPEECEEGVRIVRQQLENLGL 182
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 95 IQNIVGSCDV--EFP-IKLE-RLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKV 150
I+N+V S + EF +K+E L G + Y E FPGL+YR+K P LIF SGKV
Sbjct: 7 IENVVASTKLADEFDLVKIESELEG-----AEYNKEKFPGLVYRVKSPKAAFLIFTSGKV 61
Query: 151 VITGAKAREQIYAAFNNIYPVL 172
V TGAK E + N+ L
Sbjct: 62 VCTGAKNVEDVRTVITNMARTL 83
>gi|167043299|gb|ABZ08004.1| putative transcription factor TFIID (or TATA-binding protein, TBP)
[uncultured marine crenarchaeote HF4000_ANIW141M18]
Length = 186
Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/175 (41%), Positives = 104/175 (59%), Gaps = 12/175 (6%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ +++ +DLK + E++P +F + R+K PKT LIF SGK+VCTG
Sbjct: 10 IENVVASASVDQAIDLKDVTKKFPETEWHPDQFPGLVFRLKSPKTATLIFRSGKMVCTGG 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKD--FKIQNIVGSCDVEFPIKLE----RLNGFHA 118
KSE+ A A R + ++K ++ KD +QNIV S + I LE RL H+
Sbjct: 70 KSEAMAIKAVRTVVKQLRKGKIKIK-KDAVITVQNIVASGSLGGKIHLEDAARRLP--HS 126
Query: 119 MFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
M YEPE FPGLI+RM P +L+F SGK+V TGAK +Y + +NI+ +L
Sbjct: 127 M---YEPEQFPGLIHRMVDPKTVLLLFASGKLVCTGAKKESDVYKSVHNIHALLE 178
>gi|448620717|ref|ZP_21667964.1| transcription factor [Haloferax denitrificans ATCC 35960]
gi|445756678|gb|EMA08044.1| transcription factor [Haloferax denitrificans ATCC 35960]
Length = 188
Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 97/170 (57%), Gaps = 6/170 (3%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+VA+ + +LDL+ ++ AE+NP F + R +EPK LIF SGKIVCTGA
Sbjct: 12 IQNVVASSAIGQELDLESLSNDVTGAEFNPDNFPGLVYRTQEPKAANLIFRSGKIVCTGA 71
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
S A + + +G P+ + + +QNIV S D+ + L L G
Sbjct: 72 SSIDGVNRALDQVFEELGSLGIPIDNREEATVQNIVSSADLGTTLNLNALAIGLGLENVE 131
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAK----AREQIYAAFNNI 168
YEPE FPGL+YR+ +PNV +L+F SGK+VITGAK ARE I + I
Sbjct: 132 YEPEQFPGLVYRIDEPNVVVLLFGSGKIVITGAKKVEFAREAIQVVSDEI 181
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIV++ +L L+L +A L N EY P +F + RI EP L+F SGKIV T
Sbjct: 103 VQNIVSSADLGTTLNLNALAIGLGLENVEYEPEQFPGLVYRIDEPNVVVLLFGSGKIVIT 162
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
GAK A+ A + + + +G
Sbjct: 163 GAKKVEFAREAIQVVSDEIDSLGL 186
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 89 QFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSG 148
+ + +IQN+V S + + LE L+ + + P+ FPGL+YR ++P LIF SG
Sbjct: 6 RLESLEIQNVVASSAIGQELDLESLSN-DVTGAEFNPDNFPGLVYRTQEPKAANLIFRSG 64
Query: 149 KVVITGAKAREQIYAAFNNIYPVL 172
K+V TGA + + + A + ++ L
Sbjct: 65 KIVCTGASSIDGVNRALDQVFEEL 88
>gi|345006113|ref|YP_004808966.1| TATA-box-binding protein [halophilic archaeon DL31]
gi|344321739|gb|AEN06593.1| TATA-box-binding protein [halophilic archaeon DL31]
Length = 186
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 98/166 (59%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +LDL+ +A+ A+Y+P +F + R +EPK+ ALIF SGKIVCTGA
Sbjct: 10 IENVVASTGIGLELDLQSVAMDLEGADYDPEQFPGLVYRTEEPKSAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS + ++K+ PV+ + +QNIV S D+ + L + G
Sbjct: 70 KSTDAVHESLGIVFDELRKLDIPVEDGPEITVQNIVSSADLGESLNLNAIAIGLGLENIE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+++P+V L+F SGK+VITG K A + I
Sbjct: 130 YEPEQFPGLVYRLEEPDVVALLFGSGKLVITGGKTPADAEDAIDVI 175
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
I+N+V S + + L+ + + Y+PE FPGL+YR ++P LIF SGK+V
Sbjct: 8 ISIENVVASTGIGLELDLQSV-AMDLEGADYDPEQFPGLVYRTEEPKSAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIYPVL 172
TGAK+ + ++ + ++ L
Sbjct: 67 TGAKSTDAVHESLGIVFDEL 86
>gi|329764975|ref|ZP_08256562.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Candidatus Nitrosoarchaeum limnia SFB1]
gi|329138512|gb|EGG42761.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Candidatus Nitrosoarchaeum limnia SFB1]
Length = 187
Score = 125 bits (314), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 106/180 (58%), Gaps = 6/180 (3%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I N+VA+ ++ K DL I + EY+P +F + R+K PKT LIF +GK+VCTG+
Sbjct: 10 IVNVVASATVDQKFDLNDITKKFPDTEYHPDQFPGLVFRLKNPKTATLIFRTGKMVCTGS 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKD--FKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
KSE A+ A + + ++K G V+ KD +QNIV S ++ + LE+ S
Sbjct: 70 KSEEMARNAVKTVVQKLRKEGVKVK-KDAVVTVQNIVASINLGGKVHLEKA-ARTLPRSM 127
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNV--YVTYDQ 180
YEPE FPGLI+RM P +LIF SGK+V TGAK ++ + +N++ +L + YDQ
Sbjct: 128 YEPEQFPGLIHRMLDPKTVILIFSSGKLVCTGAKNESDVFRSVHNLHSLLEEKGLMVYDQ 187
>gi|448540133|ref|ZP_21623370.1| transcription factor [Haloferax sp. ATCC BAA-646]
gi|448551731|ref|ZP_21629465.1| transcription factor [Haloferax sp. ATCC BAA-645]
gi|448553994|ref|ZP_21630784.1| transcription factor [Haloferax sp. ATCC BAA-644]
gi|445710007|gb|ELZ61830.1| transcription factor [Haloferax sp. ATCC BAA-646]
gi|445710121|gb|ELZ61943.1| transcription factor [Haloferax sp. ATCC BAA-645]
gi|445719179|gb|ELZ70861.1| transcription factor [Haloferax sp. ATCC BAA-644]
Length = 188
Score = 125 bits (314), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 90/154 (58%), Gaps = 2/154 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+VA+ + +LDL++++L +Y+P F + R + PK+ L+F SGK+VCTGA
Sbjct: 12 IQNVVASTEVPVELDLERLSLDMNGTDYDPENFPGLVYRTRNPKSACLVFRSGKVVCTGA 71
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
S A ++G P+ D +QNIV S D+ + L L G
Sbjct: 72 DSVDDVSTAIETLFDEFTELGIPIPDDPDITVQNIVSSADLGAALNLNALAIGLGLEAVE 131
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAK 156
YEPE FPGL+YR+ +P+V +L+F SGK+VITGAK
Sbjct: 132 YEPEQFPGLVYRLDEPSVVVLMFGSGKIVITGAK 165
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
+IQN+V S +V + LERL+ + Y+PE FPGL+YR + P L+F SGKVV
Sbjct: 10 IEIQNVVASTEVPVELDLERLS-LDMNGTDYDPENFPGLVYRTRNPKSACLVFRSGKVVC 68
Query: 153 TGAKAREQIYAAFNNIY 169
TGA + + + A ++
Sbjct: 69 TGADSVDDVSTAIETLF 85
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIV++ +L L+L +A L EY P +F + R+ EP L+F SGKIV T
Sbjct: 103 VQNIVSSADLGAALNLNALAIGLGLEAVEYEPEQFPGLVYRLDEPSVVVLMFGSGKIVIT 162
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
GAK S A+ A V+++G
Sbjct: 163 GAKRVSDAETALETVDDDVRELGL 186
>gi|55377538|ref|YP_135388.1| transcription factor [Haloarcula marismortui ATCC 43049]
gi|344211616|ref|YP_004795936.1| transcription factor/TATA-box binding family protein [Haloarcula
hispanica ATCC 33960]
gi|448630604|ref|ZP_21673184.1| transcription factor [Haloarcula vallismortis ATCC 29715]
gi|448639975|ref|ZP_21677123.1| transcription factor [Haloarcula sinaiiensis ATCC 33800]
gi|448659470|ref|ZP_21683325.1| transcription factor [Haloarcula californiae ATCC 33799]
gi|448666852|ref|ZP_21685497.1| transcription factor [Haloarcula amylolytica JCM 13557]
gi|448678006|ref|ZP_21689196.1| transcription factor [Haloarcula argentinensis DSM 12282]
gi|448688547|ref|ZP_21694349.1| transcription factor [Haloarcula japonica DSM 6131]
gi|74571974|sp|Q5V470.1|TBP_HALMA RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|55230263|gb|AAV45682.1| TATA-box binding protein E [Haloarcula marismortui ATCC 43049]
gi|343782971|gb|AEM56948.1| transcription factor / TATA-box binding family protein [Haloarcula
hispanica ATCC 33960]
gi|445755637|gb|EMA07020.1| transcription factor [Haloarcula vallismortis ATCC 29715]
gi|445760411|gb|EMA11674.1| transcription factor [Haloarcula californiae ATCC 33799]
gi|445762502|gb|EMA13723.1| transcription factor [Haloarcula sinaiiensis ATCC 33800]
gi|445771983|gb|EMA23039.1| transcription factor [Haloarcula amylolytica JCM 13557]
gi|445773681|gb|EMA24714.1| transcription factor [Haloarcula argentinensis DSM 12282]
gi|445779213|gb|EMA30150.1| transcription factor [Haloarcula japonica DSM 6131]
Length = 186
Score = 125 bits (314), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 97/166 (58%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +LDL+ +A+ A+Y+P +F + R ++PK+ ALIF SGKIVCTGA
Sbjct: 10 IENVVASTGIGQELDLESVAMDLEGADYDPEQFPGLVYRTQDPKSAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS + R ++ + V + +QNIV S D+ + L + G
Sbjct: 70 KSTDDVHQSLRIVFDKLRDLNIQVDDDPEIVVQNIVSSADLGSSLNLNAIAIGLGLENIE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ +P+V L+F SGK+V+TG K +E A + I
Sbjct: 130 YEPEQFPGLVYRLDEPDVVALLFGSGKLVVTGGKRKEDAEEAVDTI 175
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 4 VIQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVC 61
V+QNIV++ +L L+L IA L N EY P +F + R+ EP AL+F SGK+V
Sbjct: 100 VVQNIVSSADLGSSLNLNAIAIGLGLENIEYEPEQFPGLVYRLDEPDVVALLFGSGKLVV 159
Query: 62 TGAKSESQAKLAARKYARIVQKIGF 86
TG K + A+ A + +G
Sbjct: 160 TGGKRKEDAEEAVDTIVERLSDLGL 184
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
I+N+V S + + LE + + Y+PE FPGL+YR + P LIF SGK+V
Sbjct: 8 IDIENVVASTGIGQELDLESV-AMDLEGADYDPEQFPGLVYRTQDPKSAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIYP---VLNVYVTYD 179
TGAK+ + ++ + ++ LN+ V D
Sbjct: 67 TGAKSTDDVHQSLRIVFDKLRDLNIQVDDD 96
>gi|448451667|ref|ZP_21592967.1| transcription factor [Halorubrum litoreum JCM 13561]
gi|448483665|ref|ZP_21605812.1| transcription factor [Halorubrum arcis JCM 13916]
gi|448514240|ref|ZP_21616992.1| transcription factor [Halorubrum distributum JCM 9100]
gi|448526080|ref|ZP_21619698.1| transcription factor [Halorubrum distributum JCM 10118]
gi|445692908|gb|ELZ45077.1| transcription factor [Halorubrum distributum JCM 9100]
gi|445699280|gb|ELZ51311.1| transcription factor [Halorubrum distributum JCM 10118]
gi|445810523|gb|EMA60548.1| transcription factor [Halorubrum litoreum JCM 13561]
gi|445820680|gb|EMA70489.1| transcription factor [Halorubrum arcis JCM 13916]
Length = 186
Score = 125 bits (314), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 97/170 (57%), Gaps = 1/170 (0%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
++N+VA+ + +LDL+ +A+ A+Y+P +F + R +PK+ ALIF SGKIVCTGA
Sbjct: 11 VENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTTDPKSAALIFRSGKIVCTGA 70
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFSTY 123
S + ++ + P++ + +QNIV S D+ + L + G Y
Sbjct: 71 NSIEAVHESLDIVFDELRALQIPIEDPEITVQNIVTSADLGESLNLNAIAIGLGLEHIEY 130
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
EPE FPGL+YR+ +P V L+F SGKVV+TG + E AA + I LN
Sbjct: 131 EPEQFPGLVYRLDEPEVVALLFGSGKVVVTGGTSPEDAAAAVDVIVEELN 180
>gi|448582755|ref|ZP_21646259.1| transcription factor [Haloferax gibbonsii ATCC 33959]
gi|445732403|gb|ELZ83986.1| transcription factor [Haloferax gibbonsii ATCC 33959]
Length = 189
Score = 125 bits (314), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 98/166 (59%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +LDL+ +A+ A+Y+P +F + R +EPK+ ALIF SGKIVCTGA
Sbjct: 10 IENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQEPKSAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS + ++++ PV + +QNIV S D+ + L + G
Sbjct: 70 KSTDDVHESLEIVFDKLRELQIPVDDDPEITVQNIVTSADLGENLNLNAIAIGLGLENIE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ +P+V L+F SGK+VITG K E AA + I
Sbjct: 130 YEPEQFPGLVYRLDEPSVVALLFGSGKLVITGGKKPEDAEAAVDVI 175
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
I+N+V S + + L+ + + Y+PE FPGL+YR ++P LIF SGK+V
Sbjct: 8 INIENVVASTGIGQELDLQSV-AMDLEGADYDPEQFPGLVYRTQEPKSAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIY 169
TGAK+ + ++ + ++
Sbjct: 67 TGAKSTDDVHESLEIVF 83
>gi|282162800|ref|YP_003355185.1| TATA-box-binding protein [Methanocella paludicola SANAE]
gi|282155114|dbj|BAI60202.1| TATA-box-binding protein [Methanocella paludicola SANAE]
Length = 188
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 96/166 (57%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + ++DLK + L A+Y+P +F + R K+PKT ALIF SGKIVCTGA
Sbjct: 13 IENVVASTAIGQEIDLKSVTLALEGADYDPEQFPGLVYRTKDPKTAALIFRSGKIVCTGA 72
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS +K + + +G V Q + +QNIV S D+ + L + G
Sbjct: 73 KSIEDVDRGLKKVFKKMDSVGIKVDQNPEITVQNIVASADLGSVLNLNAIAIGLGLENIE 132
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ P V +L+F SGK+V+TG K + A + I
Sbjct: 133 YEPEQFPGLVYRLDHPKVVVLLFGSGKLVVTGGKKPKDAEEAVDRI 178
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 91 KDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKV 150
K I+N+V S + I L+ + + Y+PE FPGL+YR K P LIF SGK+
Sbjct: 9 KTITIENVVASTAIGQEIDLKSVT-LALEGADYDPEQFPGLVYRTKDPKTAALIFRSGKI 67
Query: 151 VITGAKAREQIYAAFNNIYPVLN-VYVTYDQ 180
V TGAK+ E + ++ ++ V + DQ
Sbjct: 68 VCTGAKSIEDVDRGLKKVFKKMDSVGIKVDQ 98
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIVA+ +L L+L IA L N EY P +F + R+ PK L+F SGK+V T
Sbjct: 104 VQNIVASADLGSVLNLNAIAIGLGLENIEYEPEQFPGLVYRLDHPKVVVLLFGSGKLVVT 163
Query: 63 GAKSESQAKLAARKYARIVQKI 84
G K A+ A RIV+++
Sbjct: 164 GGKKPKDAEEAVD---RIVKEL 182
>gi|336121024|ref|YP_004575799.1| TATA-box-binding protein [Methanothermococcus okinawensis IH1]
gi|334855545|gb|AEH06021.1| TATA-box-binding protein [Methanothermococcus okinawensis IH1]
Length = 181
Score = 125 bits (313), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 102/175 (58%), Gaps = 5/175 (2%)
Query: 1 MAPVIQ--NIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGK 58
M P I+ N+V + + +DL+ A NAEY P +F + R+ EPK LIF SGK
Sbjct: 1 MKPDIKIVNVVVSTKIGNDIDLEYAADILDNAEYEPEQFPGLVCRLSEPKVALLIFRSGK 60
Query: 59 IVCTGAKSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLNGFH 117
+ CTGAKS+ +A++A +K +++ GF + + + K+QN+V + ++ L+ +
Sbjct: 61 LNCTGAKSKEEAEIAIKKVIGYLKEAGFEIDENPEVKVQNMVATAELGIEPNLDDIATLE 120
Query: 118 AMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
+ YEPE FPGL+YR+ P V +LIF SGKVVITG K +E Y A I L
Sbjct: 121 G--TEYEPEQFPGLVYRLDNPKVVVLIFGSGKVVITGLKHKEDAYIALEKILNTL 173
>gi|448466589|ref|ZP_21599175.1| transcription factor [Halorubrum kocurii JCM 14978]
gi|445813850|gb|EMA63824.1| transcription factor [Halorubrum kocurii JCM 14978]
Length = 186
Score = 125 bits (313), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 90/154 (58%), Gaps = 2/154 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+VA+ + +LDL+ +A A++NP F + R +EPK ALIF SGKIVCTGA
Sbjct: 10 IQNVVASTGIGQELDLEALAEDLPGADFNPDNFPGLVYRTQEPKAAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS A ++ + PV+ D +QNIV S D+ + L L G
Sbjct: 70 KSIDDVHEALGIIFEKLRGLQIPVEDDPDITVQNIVSSADLGHNLNLNALAIGLGLEDVE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAK 156
YEPE FPGL+YRM +P V +L+F SGK+VITG K
Sbjct: 130 YEPEQFPGLVYRMDEPEVVILLFGSGKIVITGGK 163
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
+IQN+V S + + LE L + + P+ FPGL+YR ++P LIF SGK+V
Sbjct: 8 IEIQNVVASTGIGQELDLEAL-AEDLPGADFNPDNFPGLVYRTQEPKAAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIY 169
TGAK+ + ++ A I+
Sbjct: 67 TGAKSIDDVHEALGIIF 83
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIV++ +L L+L +A L + EY P +F + R+ EP+ L+F SGKIV T
Sbjct: 101 VQNIVSSADLGHNLNLNALAIGLGLEDVEYEPEQFPGLVYRMDEPEVVILLFGSGKIVIT 160
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
G K A+ A + ++ +G
Sbjct: 161 GGKRTDDAEEAVEEIVERIEGLGL 184
>gi|432331260|ref|YP_007249403.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Methanoregula formicicum SMSP]
gi|432137969|gb|AGB02896.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Methanoregula formicicum SMSP]
Length = 186
Score = 125 bits (313), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 96/158 (60%), Gaps = 2/158 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVA+ + LDL +A ++AEYN RF V +R+++PK AL+F SGK+V TGA
Sbjct: 11 IENIVASAKVTDYLDLPALASRIKDAEYNKKRFPGVVLRMQDPKIAALVFGSGKVVLTGA 70
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS +++K+ + K ++KIQNIV S D+ I L ++ GF+
Sbjct: 71 KSIDSLSKGLNILGNLLRKLDIDIPKKLNYKIQNIVTSADLATAINLNKIAVGFNLDRIE 130
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQ 160
YEPE FPGL+YR+ P V +L+F SGK++ITG K E
Sbjct: 131 YEPEQFPGLVYRLDNPKVVVLLFGSGKLIITGGKEPED 168
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIAL--HARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
IQNIV + +L ++L KIA+ + EY P +F + R+ PK L+F SGK++ T
Sbjct: 102 IQNIVTSADLATAINLNKIAVGFNLDRIEYEPEQFPGLVYRLDNPKVVVLLFGSGKLIIT 161
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
G K AK A K ++ +G
Sbjct: 162 GGKEPEDAKKAVVKILSDLRSLGL 185
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
KI+NIV S V + L L + Y + FPG++ RM+ P + L+F SGKVV+
Sbjct: 9 LKIENIVASAKVTDYLDLPAL-ASRIKDAEYNKKRFPGVVLRMQDPKIAALVFGSGKVVL 67
Query: 153 TGAKAREQIYAAFN 166
TGAK+ + + N
Sbjct: 68 TGAKSIDSLSKGLN 81
>gi|448610758|ref|ZP_21661425.1| transcription factor [Haloferax mucosum ATCC BAA-1512]
gi|445744442|gb|ELZ95920.1| transcription factor [Haloferax mucosum ATCC BAA-1512]
Length = 188
Score = 125 bits (313), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 92/163 (56%), Gaps = 2/163 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
+QN+VA+ + +LDL +++L + +Y+P F + R +PK L+F SGKIVCTGA
Sbjct: 12 VQNVVASTEVSFELDLDRLSLDMSSTDYDPENFPGLVYRTHDPKAACLVFRSGKIVCTGA 71
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
S + A + +G PV IQNIV S D+ + L L G
Sbjct: 72 DSVTDVNAAIETLFDELDSLGVPVPDDPSPTIQNIVSSADLGGALNLNALAIGLGLEAVE 131
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAF 165
YEPE FPGL+YR+ +PNV +L+F SGK+VITGA+A +A
Sbjct: 132 YEPEQFPGLVYRLDEPNVVILMFGSGKIVITGAEAVADAESAL 174
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 91 KDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKV 150
+ ++QN+V S +V F + L+RL+ + Y+PE FPGL+YR P L+F SGK+
Sbjct: 8 RSVEVQNVVASTEVSFELDLDRLS-LDMSSTDYDPENFPGLVYRTHDPKAACLVFRSGKI 66
Query: 151 VITGAKAREQIYAAFNNIYPVLN 173
V TGA + + AA ++ L+
Sbjct: 67 VCTGADSVTDVNAAIETLFDELD 89
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 2 APVIQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKI 59
+P IQNIV++ +L L+L +A L EY P +F + R+ EP L+F SGKI
Sbjct: 100 SPTIQNIVSSADLGGALNLNALAIGLGLEAVEYEPEQFPGLVYRLDEPNVVILMFGSGKI 159
Query: 60 VCTGAKSESQAKLAARKYARIVQKIGF 86
V TGA++ + A+ A V+++G
Sbjct: 160 VITGAEAVADAESALEVVDSDVRELGL 186
>gi|313124795|ref|YP_004035059.1| tata binding protein of transcription factor tfiid [Halogeometricum
borinquense DSM 11551]
gi|448286783|ref|ZP_21478002.1| transcription factor [Halogeometricum borinquense DSM 11551]
gi|312291160|gb|ADQ65620.1| TATA binding protein of transcription factor TFIID [Halogeometricum
borinquense DSM 11551]
gi|445573322|gb|ELY27844.1| transcription factor [Halogeometricum borinquense DSM 11551]
Length = 187
Score = 125 bits (313), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 95/166 (57%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +LDL+ +A+ A+Y+P +F + R +EPK+ ALIF SGKIVCTGA
Sbjct: 10 IENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQEPKSAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS + ++ + PV + D +QNIV S D+ + L + G
Sbjct: 70 KSTDDVHESLNLVFDKLRALQIPVDDEPDITVQNIVTSADLGRNLNLNAIAIGLGLENIE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ P+V L+F SGK+VITG K A + I
Sbjct: 130 YEPEQFPGLVYRLDSPDVVALLFGSGKLVITGGKHPSDAEGAVDEI 175
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
I+N+V S + + L+ + + Y+PE FPGL+YR ++P LIF SGK+V
Sbjct: 8 INIENVVASTGIGQELDLQSV-AMDLEGADYDPEQFPGLVYRTQEPKSAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIY 169
TGAK+ + ++ + N ++
Sbjct: 67 TGAKSTDDVHESLNLVF 83
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIV + +L L+L IA L N EY P +F + R+ P AL+F SGK+V T
Sbjct: 101 VQNIVTSADLGRNLNLNAIAIGLGLENIEYEPEQFPGLVYRLDSPDVVALLFGSGKLVIT 160
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
G K S A+ A + + +G
Sbjct: 161 GGKHPSDAEGAVDEIVSRLSDLGL 184
>gi|448441657|ref|ZP_21589264.1| transcription factor [Halorubrum saccharovorum DSM 1137]
gi|445688693|gb|ELZ40944.1| transcription factor [Halorubrum saccharovorum DSM 1137]
Length = 185
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 97/170 (57%), Gaps = 1/170 (0%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +LDL+ +A+ A+Y+P +F + R +PK+ ALIF SGKIVCTGA
Sbjct: 10 IENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTTDPKSAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFSTY 123
S + ++K+ P++ + +QNIV S D+ + L + G Y
Sbjct: 70 NSIDAVHESLDLVFDELRKLQIPIEDPEITVQNIVTSADLGESLNLNAIAIGLGLEHIEY 129
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
EPE FPGL+YR+ P+V L+F SGK+VITG + AA + I L+
Sbjct: 130 EPEQFPGLVYRIDDPDVVALLFGSGKLVITGGTTPDDAAAAVDVIVEELD 179
>gi|448593777|ref|ZP_21652677.1| transcription factor [Haloferax elongans ATCC BAA-1513]
gi|445728641|gb|ELZ80242.1| transcription factor [Haloferax elongans ATCC BAA-1513]
Length = 188
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 96/170 (56%), Gaps = 6/170 (3%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+VA+ + +LDL+ ++ AE+NP F + R ++P+ LIF SGKIVCTGA
Sbjct: 12 IQNVVASSAVGQELDLESLSDDVAGAEFNPDNFPGLVYRTQDPRAANLIFRSGKIVCTGA 71
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
S + A + + +G P + + +QNIV S D+ + L L G
Sbjct: 72 SSVDEVNRALEQVFEELGSLGIPTDGREEATVQNIVSSADLGTTLNLNALAIGLGLEHVE 131
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAK----AREQIYAAFNNI 168
YEPE FPGL+YR+ PNV +L+F SGK+VITGAK ARE I + I
Sbjct: 132 YEPEQFPGLVYRIDDPNVVVLLFGSGKIVITGAKKVEFAREAINVVSDEI 181
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 89 QFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSG 148
+ +IQN+V S V + LE L+ A + + P+ FPGL+YR + P LIF SG
Sbjct: 6 RLDSLEIQNVVASSAVGQELDLESLSDDVAG-AEFNPDNFPGLVYRTQDPRAANLIFRSG 64
Query: 149 KVVITGAKAREQIYAAFNNIYPVL 172
K+V TGA + +++ A ++ L
Sbjct: 65 KIVCTGASSVDEVNRALEQVFEEL 88
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIV++ +L L+L +A L + EY P +F + RI +P L+F SGKIV T
Sbjct: 103 VQNIVSSADLGTTLNLNALAIGLGLEHVEYEPEQFPGLVYRIDDPNVVVLLFGSGKIVIT 162
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
GAK A+ A + ++ +G
Sbjct: 163 GAKKVEFAREAINVVSDEIESLGL 186
>gi|448457842|ref|ZP_21595847.1| transcription factor [Halorubrum lipolyticum DSM 21995]
gi|445810143|gb|EMA60174.1| transcription factor [Halorubrum lipolyticum DSM 21995]
Length = 185
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 99/170 (58%), Gaps = 1/170 (0%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +LDL+ +A+ A+Y+P +F + R +PK+ ALIF SGKIVCTGA
Sbjct: 10 IENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTTDPKSAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFSTY 123
S + ++K+ P++ + +QNIV S D+ + L + G Y
Sbjct: 70 NSIEAVHESLDLVFDELRKLQIPIEDPEITVQNIVTSADLGESLNLNAIAIGLGLEHIEY 129
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
EPE FPGL+YR+ +P+V L+F SGK+V+TG + + AA + I L+
Sbjct: 130 EPEQFPGLVYRIDEPDVVALLFGSGKLVVTGGTSPDDAAAAVDVIVEELD 179
>gi|448608858|ref|ZP_21660137.1| transcription factor [Haloferax mucosum ATCC BAA-1512]
gi|445747235|gb|ELZ98691.1| transcription factor [Haloferax mucosum ATCC BAA-1512]
Length = 186
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 93/166 (56%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+VA+ + +LDL+ +A A++NP F + R ++PK ALIF SGKIVCTGA
Sbjct: 10 IQNVVASTGIGQELDLEALADDLPGADFNPDNFPGLVYRTQDPKAAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS A ++++ PV + +QNIV S D+ + L L G
Sbjct: 70 KSIDDVHDALGIIFDKLRELQIPVDDDPEITVQNIVSSADLGHNLNLNALAIGLGLEDVE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YRM KP V +L+F SGK+VITG K + A I
Sbjct: 130 YEPEQFPGLVYRMDKPKVVILLFGSGKIVITGGKQTDDAATAVEEI 175
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIV++ +L L+L +A L + EY P +F + R+ +PK L+F SGKIV T
Sbjct: 101 VQNIVSSADLGHNLNLNALAIGLGLEDVEYEPEQFPGLVYRMDKPKVVILLFGSGKIVIT 160
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
G K A A + + +G
Sbjct: 161 GGKQTDDAATAVEEIVERIDALGL 184
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
+IQN+V S + + LE L + + P+ FPGL+YR + P LIF SGK+V
Sbjct: 8 IEIQNVVASTGIGQELDLEAL-ADDLPGADFNPDNFPGLVYRTQDPKAAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIY 169
TGAK+ + ++ A I+
Sbjct: 67 TGAKSIDDVHDALGIIF 83
>gi|297620217|ref|YP_003708322.1| TATA-box binding family protein [Methanococcus voltae A3]
gi|297379194|gb|ADI37349.1| TATA-box binding family protein [Methanococcus voltae A3]
Length = 181
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 101/175 (57%), Gaps = 5/175 (2%)
Query: 1 MAPVIQ--NIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGK 58
M P I+ N+V + + +DL+ A NAEY P +F + R+ +PK LIF SGK
Sbjct: 1 MEPEIKIVNVVVSTQIGTDIDLEYAADVLDNAEYEPEQFPGLVCRLSDPKVALLIFRSGK 60
Query: 59 IVCTGAKSESQAKLAARKYARIVQKIGFP-VQFKDFKIQNIVGSCDVEFPIKLERLNGFH 117
+ CTGAKS+S A++A +K +++ G + + IQN+V + ++ L+ ++
Sbjct: 61 LNCTGAKSKSDAEIAIKKIIAELKEAGMEIIDNPEVSIQNMVATTELGMEPNLDDISTLE 120
Query: 118 AMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
+ YEPE FPGL+YR+ P V +LIF SGKVVITG K + Y AFN I L
Sbjct: 121 C--TEYEPEQFPGLVYRLSDPKVVVLIFGSGKVVITGLKKIDDAYTAFNKILTTL 173
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+VAT L + +L I+ EY P +F + R+ +PK LIF SGK+V TG
Sbjct: 98 IQNMVATTELGMEPNLDDIS-TLECTEYEPEQFPGLVYRLSDPKVVVLIFGSGKVVITGL 156
Query: 65 KSESQAKLAARKYARIVQKI 84
K A A K ++++
Sbjct: 157 KKIDDAYTAFNKILTTLKEL 176
>gi|14423942|sp|Q9P9I9.1|TBP_METTL RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor;
AltName: Full=aTBP
gi|6723836|emb|CAB66385.1| archaeal transcription factor TBP [Methanothermococcus
thermolithotrophicus]
Length = 181
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 100/175 (57%), Gaps = 5/175 (2%)
Query: 1 MAPVIQ--NIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGK 58
M P I+ N+V + + +DL+ A NAEY P +F + R+ +PK LIF SGK
Sbjct: 1 MEPEIKIVNVVVSTQIGTDIDLEYAADILDNAEYEPEQFPGLVCRLSDPKVALLIFRSGK 60
Query: 59 IVCTGAKSESQAKLAARKYARIVQKIGFP-VQFKDFKIQNIVGSCDVEFPIKLERLNGFH 117
+ CTGAKS+ A++A +K + ++ G + + +QN+V + D+ L+ ++
Sbjct: 61 LNCTGAKSKEDAEIAIKKIIKELKDAGMDIIDNPEVNVQNMVATADLGIEPNLDDISTLE 120
Query: 118 AMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
+ YEPE FPGL+YR+ P V +LIF SGKVVITG K ++ Y A + I L
Sbjct: 121 G--TEYEPEQFPGLVYRLSDPKVVVLIFGSGKVVITGLKKKDDAYLALDKILSTL 173
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
+QN+VAT +L + +L I+ EY P +F + R+ +PK LIF SGK+V TG
Sbjct: 98 VQNMVATADLGIEPNLDDIS-TLEGTEYEPEQFPGLVYRLSDPKVVVLIFGSGKVVITGL 156
Query: 65 KSESQAKLAARKYARIVQKI 84
K + A LA K ++++
Sbjct: 157 KKKDDAYLALDKILSTLKEL 176
>gi|118575298|ref|YP_875041.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Cenarchaeum symbiosum A]
gi|118193819|gb|ABK76737.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Cenarchaeum symbiosum A]
Length = 186
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 102/171 (59%), Gaps = 4/171 (2%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
++N+VA+ +++ K+DL + + EYNP +F + R+ PKT LIF +GK+VCTGA
Sbjct: 10 VENVVASASVDQKIDLNDVTKKFPDTEYNPEQFPGLVFRLTSPKTATLIFRTGKMVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKD--FKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
KSE A A R + ++K G ++ KD +QNIV + ++ I LE+ S
Sbjct: 70 KSEDMAVKAVRTVVQKLRKSGIKIK-KDAVVVVQNIVAAINLGGKIHLEKAARVLPR-SM 127
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
YEPE FPGLI+RM P +L+F SGK+V TGAK +Y + N++ +L
Sbjct: 128 YEPEQFPGLIHRMLDPKTVILLFASGKLVCTGAKKESDMYRSVYNLHALLE 178
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 44/66 (66%)
Query: 4 VIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
V+QNIVA INL K+ L+K A + Y P +F + R+ +PKT L+F+SGK+VCTG
Sbjct: 100 VVQNIVAAINLGGKIHLEKAARVLPRSMYEPEQFPGLIHRMLDPKTVILLFASGKLVCTG 159
Query: 64 AKSESQ 69
AK ES
Sbjct: 160 AKKESD 165
>gi|448503146|ref|ZP_21612913.1| transcription factor [Halorubrum coriense DSM 10284]
gi|445693155|gb|ELZ45315.1| transcription factor [Halorubrum coriense DSM 10284]
Length = 186
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 98/170 (57%), Gaps = 1/170 (0%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
++N+VA+ + +LDL+ +A+ A+Y+P +F + R +PK+ ALIF SGKIVCTGA
Sbjct: 11 VENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTTDPKSAALIFRSGKIVCTGA 70
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFSTY 123
S + ++ + P++ + +QNIV S D+ + L + G Y
Sbjct: 71 NSIDAVYESLDIVFEELRALQIPIEDPEVTVQNIVTSADLGESLNLNAIAIGLGLEHIEY 130
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
EPE FPGL+YR+ +P+V L+F SGKVV+TG + E AA + I L+
Sbjct: 131 EPEQFPGLVYRLDEPDVVALLFGSGKVVVTGGTSPEDAAAAVDVIVEELD 180
>gi|167045405|gb|ABZ10060.1| putative transcription factor TFIID (or TATA-binding protein, TBP)
[uncultured marine crenarchaeote HF4000_APKG10F15]
Length = 186
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 100/171 (58%), Gaps = 4/171 (2%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ +++ +DLK + E++P +F + R+K PKT LIF SGK+VCTG
Sbjct: 10 IENVVASASVDQAIDLKDVTKKFPETEWHPDQFPGLVFRLKSPKTATLIFRSGKMVCTGG 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKD--FKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
KSE+ A A R + ++K ++ KD +QNIV S + I LE S
Sbjct: 70 KSEAMAIKAVRTVVKQLRKGKIKIK-KDAVITVQNIVASGSLGGKIHLED-AARRLPRSM 127
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
YEPE FPGLI+RM P +L+F SGK+V TGAK +Y + +NI+ +L
Sbjct: 128 YEPEQFPGLIHRMVDPKTVLLLFASGKLVCTGAKKESDVYKSVHNIHALLE 178
>gi|167044379|gb|ABZ09056.1| putative transcription factor TFIID (or TATA-binding protein, TBP)
[uncultured marine crenarchaeote HF4000_APKG6D3]
Length = 186
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 100/171 (58%), Gaps = 4/171 (2%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ +++ +DLK + E++P +F + R+K PKT LIF SGK+VCTG
Sbjct: 10 IENVVASASVDQAIDLKDVTKKFPETEWHPEQFPGLVFRLKSPKTATLIFRSGKMVCTGG 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKD--FKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
KSE+ A A R + ++K ++ KD +QNIV S + I LE S
Sbjct: 70 KSEAMAIKAVRTVVKQLRKGKIKIK-KDAVITVQNIVASGSLGGKIHLED-AARRLPRSM 127
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
YEPE FPGLI+RM P +L+F SGK+V TGAK +Y + +NI+ +L
Sbjct: 128 YEPEQFPGLIHRMVDPKTVLLLFASGKLVCTGAKKESDVYKSVHNIHALLE 178
>gi|73668595|ref|YP_304610.1| transcription factor [Methanosarcina barkeri str. Fusaro]
gi|72395757|gb|AAZ70030.1| TATA binding protein of transcription factor TFIID [Methanosarcina
barkeri str. Fusaro]
Length = 184
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 94/159 (59%), Gaps = 3/159 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
++N+VA+ L DL+KI AEYN ++F + R + PK LIF+SGK+VCTGA
Sbjct: 7 VENVVASTTLAEDFDLQKIEARLEKAEYNKAKFPGLVYRTENPKAAFLIFTSGKVVCTGA 66
Query: 65 KSESQAKLAARKYARIVQKIGFPV--QFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFS 121
K+ AK+A A ++ IG D IQNIV + D+E + L + F
Sbjct: 67 KTVDNAKMAIINLASTLKSIGCEKINPEPDVHIQNIVATADLETNLNLNTIVIAFGMENV 126
Query: 122 TYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQ 160
YEPE+FPGL+YR++ P V +LIF SGK+VITG K+ E
Sbjct: 127 EYEPEVFPGLVYRLEDPRVVVLIFSSGKLVITGGKSPED 165
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKI--ALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
IQNIVAT +LE L+L I A N EY P F + R+++P+ LIFSSGK+V T
Sbjct: 99 IQNIVATADLETNLNLNTIVIAFGMENVEYEPEVFPGLVYRLEDPRVVVLIFSSGKLVIT 158
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
G KS + R + +G
Sbjct: 159 GGKSPEDCEEGLRVIKKEFDNLGL 182
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 95 IQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITG 154
++N+V S + L+++ + Y FPGL+YR + P LIF SGKVV TG
Sbjct: 7 VENVVASTTLAEDFDLQKIEA-RLEKAEYNKAKFPGLVYRTENPKAAFLIFTSGKVVCTG 65
Query: 155 AKAREQIYAAFNNIYPVL 172
AK + A N+ L
Sbjct: 66 AKTVDNAKMAIINLASTL 83
>gi|345004914|ref|YP_004807767.1| TATA-box-binding protein [halophilic archaeon DL31]
gi|344320540|gb|AEN05394.1| TATA-box-binding protein [halophilic archaeon DL31]
Length = 186
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 95/166 (57%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+VA+ + +LDL+ +A A++NP F + R ++PK ALIF SGKIVCTGA
Sbjct: 10 IQNVVASTGIGQELDLEALAEDLPGADFNPDNFPGLVYRTQDPKAAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS A + ++ + PV+ + + +QNIV S D+ + L L G
Sbjct: 70 KSIDDVHDALAIIFQKLRDLTIPVEEEPEITVQNIVSSADLGHNLNLNALAIGLGLEDVE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YRM P+V +L+F SGK+VITG K + A I
Sbjct: 130 YEPEQFPGLVYRMDDPDVVILLFGSGKIVITGGKQVQDAQEAVEKI 175
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIV++ +L L+L +A L + EY P +F + R+ +P L+F SGKIV T
Sbjct: 101 VQNIVSSADLGHNLNLNALAIGLGLEDVEYEPEQFPGLVYRMDDPDVVILLFGSGKIVIT 160
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
G K A+ A K ++ +G
Sbjct: 161 GGKQVQDAQEAVEKIVERIEGLGL 184
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
+IQN+V S + + LE L + + P+ FPGL+YR + P LIF SGK+V
Sbjct: 8 IEIQNVVASTGIGQELDLEAL-AEDLPGADFNPDNFPGLVYRTQDPKAAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIY 169
TGAK+ + ++ A I+
Sbjct: 67 TGAKSIDDVHDALAIIF 83
>gi|336477906|ref|YP_004617047.1| TATA-box binding family protein [Methanosalsum zhilinae DSM 4017]
gi|335931287|gb|AEH61828.1| TATA-box binding family protein [Methanosalsum zhilinae DSM 4017]
Length = 183
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 91/158 (57%), Gaps = 2/158 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ L DL KI + AEYN +F + R+ +PK L+F+SGK+VCTGA
Sbjct: 8 IENVVASTKLAESFDLTKIEMEFEGAEYNKQKFPGLVYRVSDPKAAFLVFTSGKVVCTGA 67
Query: 65 KSESQAKLAARKYARIVQKIGFP-VQFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
K+ + AR + IG V+ D +QNIV S D+ + L + G
Sbjct: 68 KNVEDVHTVIKNMARKLNSIGVETVEDPDITVQNIVASADLHAILNLNAIAIGLGLENIE 127
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQ 160
YEPE FPGL+YR+ +P V +LIF SGK+V+TG K+ E
Sbjct: 128 YEPEQFPGLVYRIDEPKVVVLIFSSGKLVVTGGKSPED 165
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIVA+ +L L+L IA L N EY P +F + RI EPK LIFSSGK+V T
Sbjct: 99 VQNIVASADLHAILNLNAIAIGLGLENIEYEPEQFPGLVYRIDEPKVVVLIFSSGKLVVT 158
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
G KS ++ + + +G
Sbjct: 159 GGKSPEDCEMGVEVVRQQLDSMGL 182
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 92 DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVV 151
+ KI+N+V S + L ++ + Y + FPGL+YR+ P L+F SGKVV
Sbjct: 5 NIKIENVVASTKLAESFDLTKIE-MEFEGAEYNKQKFPGLVYRVSDPKAAFLVFTSGKVV 63
Query: 152 ITGAKAREQIYAAFNNIYPVLN 173
TGAK E ++ N+ LN
Sbjct: 64 CTGAKNVEDVHTVIKNMARKLN 85
>gi|389847270|ref|YP_006349509.1| TATA-binding transcription initiation factor [Haloferax
mediterranei ATCC 33500]
gi|448614785|ref|ZP_21663813.1| transcription factor [Haloferax mediterranei ATCC 33500]
gi|388244576|gb|AFK19522.1| TATA-binding transcription initiation factor [Haloferax
mediterranei ATCC 33500]
gi|445752872|gb|EMA04291.1| transcription factor [Haloferax mediterranei ATCC 33500]
Length = 186
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 94/166 (56%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+VA+ + +LDL+ +A A++NP F + R ++PK ALIF SGKIVCTGA
Sbjct: 10 IQNVVASTGIGQELDLEALADDLPGADFNPDNFPGLVYRTQDPKAAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS A ++++ PV + + +QNIV S D+ + L L G
Sbjct: 70 KSIDDVHDALEIIFDKLRELQIPVDDEPEITVQNIVSSADLGHNLNLNALAIGLGLEDVE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YRM +P V +L+F SGK+VITG K + A I
Sbjct: 130 YEPEQFPGLVYRMDEPKVVILLFGSGKIVITGGKRTDDAETAVEEI 175
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIV++ +L L+L +A L + EY P +F + R+ EPK L+F SGKIV T
Sbjct: 101 VQNIVSSADLGHNLNLNALAIGLGLEDVEYEPEQFPGLVYRMDEPKVVILLFGSGKIVIT 160
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
G K A+ A + + +G
Sbjct: 161 GGKRTDDAETAVEEIVERIDALGL 184
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
+IQN+V S + + LE L + + P+ FPGL+YR + P LIF SGK+V
Sbjct: 8 IEIQNVVASTGIGQELDLEAL-ADDLPGADFNPDNFPGLVYRTQDPKAAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIY 169
TGAK+ + ++ A I+
Sbjct: 67 TGAKSIDDVHDALEIIF 83
>gi|448498781|ref|ZP_21610993.1| transcription factor [Halorubrum coriense DSM 10284]
gi|445698147|gb|ELZ50197.1| transcription factor [Halorubrum coriense DSM 10284]
Length = 186
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 93/166 (56%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+VA+ + +LDL+ +A A++NP F + R +EPK ALIF SGKIVCTGA
Sbjct: 10 IQNVVASTGIGQELDLEALAEDLPGADFNPDNFPGLVYRTQEPKAAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS A ++ + PV+ + +QNIV S D+ + L L G
Sbjct: 70 KSIDDVHEALGIIFEKLRGLQIPVEDDPEITVQNIVSSADLGHNLNLNALAIGLGLEDVE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YRM +P V +L+F SGK+VITG K + A I
Sbjct: 130 YEPEQFPGLVYRMDEPEVVILLFGSGKIVITGGKRTDDAEEAVKEI 175
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIV++ +L L+L +A L + EY P +F + R+ EP+ L+F SGKIV T
Sbjct: 101 VQNIVSSADLGHNLNLNALAIGLGLEDVEYEPEQFPGLVYRMDEPEVVILLFGSGKIVIT 160
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
G K A+ A ++ ++ +G
Sbjct: 161 GGKRTDDAEEAVKEIVERIEGLGL 184
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
+IQN+V S + + LE L + + P+ FPGL+YR ++P LIF SGK+V
Sbjct: 8 IEIQNVVASTGIGQELDLEAL-AEDLPGADFNPDNFPGLVYRTQEPKAAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIY 169
TGAK+ + ++ A I+
Sbjct: 67 TGAKSIDDVHEALGIIF 83
>gi|149032877|gb|EDL87732.1| rCG41948, isoform CRA_a [Rattus norvegicus]
Length = 238
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 88/138 (63%), Gaps = 1/138 (0%)
Query: 16 CKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAAR 75
C L+L+KIAL N Y V M++++P+ TA I+SSGKI+CTGA SE +AK AR
Sbjct: 44 CHLNLRKIALEGANVIYKRD-VGKVLMKLRKPRITATIWSSGKIICTGATSEEEAKFGAR 102
Query: 76 KYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRM 135
+ AR +QK+GF V F DFK+ N++ C++ F I+L + ++YEPEL P + YR+
Sbjct: 103 RLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASYEPELHPAVCYRI 162
Query: 136 KKPNVTMLIFLSGKVVIT 153
K T+ IF +G + +T
Sbjct: 163 KSLRATLQIFSTGSITVT 180
>gi|435846586|ref|YP_007308836.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Natronococcus occultus SP4]
gi|433672854|gb|AGB37046.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Natronococcus occultus SP4]
Length = 185
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 93/165 (56%), Gaps = 1/165 (0%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + + DL+ +A NA+Y+P F + RI EPK+ LIF +GK+VCTG+
Sbjct: 10 IENVVASGDTGREFDLQTLAEDLDNAQYDPKTFPGIVYRIDEPKSAGLIFHTGKVVCTGS 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFSTY 123
KS + +++G ++ F +QNIV S D+ + + L + G Y
Sbjct: 70 KSVEDINKSVESIFNAFERLGISIEENPFTVQNIVSSADLGYSLNLNAVAVGLGLGQIEY 129
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
EPE FPGL+YR+ +P+V L+F SGK VITG + A N I
Sbjct: 130 EPEQFPGLVYRLDEPDVVALLFGSGKTVITGGTEVQDATNAVNVI 174
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 95 IQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITG 154
I+N+V S D L+ L + Y+P+ FPG++YR+ +P LIF +GKVV TG
Sbjct: 10 IENVVASGDTGREFDLQTL-AEDLDNAQYDPKTFPGIVYRIDEPKSAGLIFHTGKVVCTG 68
Query: 155 AKAREQIYAAFNNIY 169
+K+ E I + +I+
Sbjct: 69 SKSVEDINKSVESIF 83
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIV++ +L L+L +A L EY P +F + R+ EP AL+F SGK V T
Sbjct: 100 VQNIVSSADLGYSLNLNAVAVGLGLGQIEYEPEQFPGLVYRLDEPDVVALLFGSGKTVIT 159
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
G A A A ++ +G
Sbjct: 160 GGTEVQDATNAVNVIASKLEDLGL 183
>gi|296241961|ref|YP_003649448.1| TATA binding protein of transcription factor TFIID [Thermosphaera
aggregans DSM 11486]
gi|296094545|gb|ADG90496.1| TATA binding protein of transcription factor TFIID [Thermosphaera
aggregans DSM 11486]
Length = 193
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 94/151 (62%), Gaps = 2/151 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVAT+ LE +LDL+ I Y P +F + R+ +PKTTALIF SGK+V TGA
Sbjct: 13 IENIVATVILEHELDLELIETRIPAITYKPDQFPGLIFRLDKPKTTALIFKSGKMVVTGA 72
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KS Q A ++ +++ K V K +IQNIV S D+ + LE+ + S Y
Sbjct: 73 KSTQQLIEAVKRMIKVLLKYDIKVTGKPRIQIQNIVASGDIGAYVHLEK-AAYLLEDSMY 131
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITG 154
EPE FPGLI+RM+ P V +LIF SGK+VITG
Sbjct: 132 EPEQFPGLIHRMRSPRVVLLIFSSGKMVITG 162
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
+KI+NIV + +E + LE + TY+P+ FPGLI+R+ KP T LIF SGK+V+
Sbjct: 11 YKIENIVATVILEHELDLELIETRIPAI-TYKPDQFPGLIFRLDKPKTTALIFKSGKMVV 69
Query: 153 TGAKAREQIYAAFNNIYPVLNVY 175
TGAK+ +Q+ A + VL Y
Sbjct: 70 TGAKSTQQLIEAVKRMIKVLLKY 92
>gi|433593266|ref|YP_007282752.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Natrinema pellirubrum DSM 15624]
gi|433308304|gb|AGB34114.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Natrinema pellirubrum DSM 15624]
Length = 194
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 101/171 (59%), Gaps = 3/171 (1%)
Query: 2 APV-IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
AP+ I+N+VA+ + +L+L+ +A ++EYNP F + RI++P L+F SGKIV
Sbjct: 6 APLKIENVVASTGVGQELNLEALADDLPHSEYNPGNFPGMVHRIQDPNAVTLLFRSGKIV 65
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFP-VQFKDFKIQNIVGSCDVEFPIKLERLN-GFHA 118
CTGA+S + A + ++ +G V + IQNIV S D+ I L + G
Sbjct: 66 CTGAQSTADVTDALNILFQDLRDLGIDVVDQPEITIQNIVSSGDLGEQIDLNAIAIGLGL 125
Query: 119 MFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIY 169
+ YEPE FPGL+YR+ P V +L+F SGK+VITGAK R+ +A ++
Sbjct: 126 EHTEYEPEQFPGLVYRLTSPPVVVLLFGSGKLVITGAKTRDNAQSALETVH 176
>gi|292494314|ref|YP_003533457.1| TATA-binding transcription initiation factor [Haloferax volcanii
DS2]
gi|448289408|ref|ZP_21480579.1| transcription factor [Haloferax volcanii DS2]
gi|291369097|gb|ADE01327.1| TATA-binding transcription initiation factor [Haloferax volcanii
DS2]
gi|445582489|gb|ELY36830.1| transcription factor [Haloferax volcanii DS2]
Length = 188
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 89/154 (57%), Gaps = 2/154 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+VA+ + +LDL++++L +Y+P F + R + PK+ L+F SGK+VCTGA
Sbjct: 12 IQNVVASTEVPVELDLERLSLDMNGTDYDPENFPGLVYRTRNPKSACLVFRSGKVVCTGA 71
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
S A ++G P+ D +QNIV S D+ + L L G
Sbjct: 72 DSVDDVSTAIETLFDEFTELGIPIPDDPDITVQNIVSSADLGAALNLNALAIGLGLEAVE 131
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAK 156
YEPE FPGL+YR+ +P+V +L+F SGK+VITG K
Sbjct: 132 YEPEQFPGLVYRLDEPSVVVLMFGSGKIVITGVK 165
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
+IQN+V S +V + LERL+ + Y+PE FPGL+YR + P L+F SGKVV
Sbjct: 10 IEIQNVVASTEVPVELDLERLS-LDMNGTDYDPENFPGLVYRTRNPKSACLVFRSGKVVC 68
Query: 153 TGAKAREQIYAAFNNIY 169
TGA + + + A ++
Sbjct: 69 TGADSVDDVSTAIETLF 85
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIV++ +L L+L +A L EY P +F + R+ EP L+F SGKIV T
Sbjct: 103 VQNIVSSADLGAALNLNALAIGLGLEAVEYEPEQFPGLVYRLDEPSVVVLMFGSGKIVIT 162
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
G K A+ A V+++G
Sbjct: 163 GVKRVGDAETALETVDDDVRELGL 186
>gi|429193145|ref|YP_007178823.1| TATA-box binding protein [Natronobacterium gregoryi SP2]
gi|448327012|ref|ZP_21516352.1| transcription factor [Natronobacterium gregoryi SP2]
gi|429137363|gb|AFZ74374.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Natronobacterium gregoryi SP2]
gi|445609541|gb|ELY63341.1| transcription factor [Natronobacterium gregoryi SP2]
Length = 185
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 90/165 (54%), Gaps = 1/165 (0%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +LDL +A+ EY+P F RI +PK L+F SGKIVCTGA
Sbjct: 10 IENVVASTGIGQELDLGPVAMDLEGVEYDPELFPGAVYRIDDPKAALLLFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFSTY 123
KS + A ++ + PV+ +QNIV S D+ + L + G Y
Sbjct: 70 KSTDDMRRAVEIVFEKLRDLSIPVEPDGVTVQNIVSSADLGHHLNLNAIAIGLGLENIEY 129
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
EPE FPGL+YR+ P+V +L+F SGK+VITG + + A +
Sbjct: 130 EPEQFPGLVYRIDDPDVVLLLFGSGKIVITGGEQPDDAEQAVGQV 174
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIV++ +L L+L IA L N EY P +F + RI +P L+F SGKIV T
Sbjct: 100 VQNIVSSADLGHHLNLNAIAIGLGLENIEYEPEQFPGLVYRIDDPDVVLLLFGSGKIVIT 159
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
G + A+ A + + ++G
Sbjct: 160 GGEQPDDAEQAVGQVRNRLGELGL 183
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIY 169
Y+PELFPG +YR+ P +L+F SGK+V TGAK+ + + A ++
Sbjct: 37 YDPELFPGAVYRIDDPKAALLLFRSGKIVCTGAKSTDDMRRAVEIVF 83
>gi|150403180|ref|YP_001330474.1| transcription factor [Methanococcus maripaludis C7]
gi|166227820|sp|A6VIP7.1|TBP_METM7 RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|150034210|gb|ABR66323.1| TATA-box binding [Methanococcus maripaludis C7]
Length = 181
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 99/175 (56%), Gaps = 5/175 (2%)
Query: 1 MAPVIQ--NIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGK 58
M P I+ N+V + + +DL+ A NAEY P +F + R+ +PK LIF SGK
Sbjct: 1 MEPEIKIVNVVVSTQIGTDIDLEYAADILDNAEYEPEQFPGLVCRLSDPKVALLIFRSGK 60
Query: 59 IVCTGAKSESQAKLAARKYARIVQKIGFP-VQFKDFKIQNIVGSCDVEFPIKLERLNGFH 117
+ CTGAKS+ A +A K + +Q+ G + + +QN+V + ++ L+ ++
Sbjct: 61 LNCTGAKSKDDAVIAINKIIKELQEAGMDIIDNPEVNVQNMVATTELGMEPNLDDISTLE 120
Query: 118 AMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
+ YEPE FPGL+YR+ P V +LIF SGKVVITG K + Y AFN I L
Sbjct: 121 C--TEYEPEQFPGLVYRLSDPKVVVLIFGSGKVVITGLKRIDDAYVAFNKILTTL 173
>gi|448604603|ref|ZP_21657770.1| transcription factor [Haloferax sulfurifontis ATCC BAA-897]
gi|448624485|ref|ZP_21670433.1| transcription factor [Haloferax denitrificans ATCC 35960]
gi|445744012|gb|ELZ95492.1| transcription factor [Haloferax sulfurifontis ATCC BAA-897]
gi|445749690|gb|EMA01132.1| transcription factor [Haloferax denitrificans ATCC 35960]
Length = 186
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 94/166 (56%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+VA+ + +LDL+ +A A++NP F + R ++PK ALIF SGKIVCTGA
Sbjct: 10 IQNVVASTGIGQELDLEALADDLPGADFNPDNFPGLVYRTQDPKAAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS A ++++ PV + + +QNIV S D+ + L L G
Sbjct: 70 KSIDDVHDALGIIFDKLRELQIPVDDEPEITVQNIVSSADLGHNLNLNALAIGLGLEDVE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YRM +P V +L+F SGK+VITG K + A I
Sbjct: 130 YEPEQFPGLVYRMDEPKVVILLFGSGKIVITGGKRTDDAETAVEEI 175
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIV++ +L L+L +A L + EY P +F + R+ EPK L+F SGKIV T
Sbjct: 101 VQNIVSSADLGHNLNLNALAIGLGLEDVEYEPEQFPGLVYRMDEPKVVILLFGSGKIVIT 160
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
G K A+ A + + +G
Sbjct: 161 GGKRTDDAETAVEEIVERIDALGL 184
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
+IQN+V S + + LE L + + P+ FPGL+YR + P LIF SGK+V
Sbjct: 8 IEIQNVVASTGIGQELDLEAL-ADDLPGADFNPDNFPGLVYRTQDPKAAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIY 169
TGAK+ + ++ A I+
Sbjct: 67 TGAKSIDDVHDALGIIF 83
>gi|397780477|ref|YP_006544950.1| TATA-box-binding protein [Methanoculleus bourgensis MS2]
gi|396938979|emb|CCJ36234.1| TATA-box-binding protein AltName: Full=TATA-box factor
[Methanoculleus bourgensis MS2]
Length = 237
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 99/171 (57%), Gaps = 2/171 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVA+ + LDL +A ++AEYN RF V +R+++PK AL+F SGK+V TGA
Sbjct: 62 IENIVASAKVTDSLDLNSLASQLKDAEYNKKRFPGVVLRMQDPKIAALVFGSGKVVLTGA 121
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS + ++ + + + +K+QNIV S D+ PI L ++ GF+
Sbjct: 122 KSIDNLSRGLQILGDQLRALNIDIPENLTYKVQNIVTSADLGTPINLNKIAVGFNLDKIE 181
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
YEPE FPGL+YR+ P V +L+F SGK++ITG K E A I L+
Sbjct: 182 YEPEQFPGLVYRLDDPKVVVLLFGSGKLIITGGKQPEDARRAVQRILSELS 232
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIAL--HARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIV + +L ++L KIA+ + EY P +F + R+ +PK L+F SGK++ T
Sbjct: 153 VQNIVTSADLGTPINLNKIAVGFNLDKIEYEPEQFPGLVYRLDDPKVVVLLFGSGKLIIT 212
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
G K A+ A ++ + +G
Sbjct: 213 GGKQPEDARRAVQRILSELSSLGL 236
>gi|147920361|ref|YP_685866.1| transcription factor [Methanocella arvoryzae MRE50]
gi|110621262|emb|CAJ36540.1| TATA-box binding protein E [Methanocella arvoryzae MRE50]
Length = 188
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 96/166 (57%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + ++DLK + L A+Y+P +F + R K+PKT ALIF SGKIVCTGA
Sbjct: 13 IENVVASTAIGQEIDLKSVTLALDGADYDPEQFPGLVYRTKDPKTAALIFRSGKIVCTGA 72
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS +K + + +G V + +QNIV S D+ + L + G
Sbjct: 73 KSIEDVDRGLKKVFKKMDSVGIKVADNPEITVQNIVASADLGSVLNLNAIAIGLGLENIE 132
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ +P V +L+F SGK+V+TG K + A + I
Sbjct: 133 YEPEQFPGLVYRIDQPKVVVLLFGSGKLVVTGGKKPKDAEEAVDRI 178
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIVA+ +L L+L IA L N EY P +F + RI +PK L+F SGK+V T
Sbjct: 104 VQNIVASADLGSVLNLNAIAIGLGLENIEYEPEQFPGLVYRIDQPKVVVLLFGSGKLVVT 163
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
G K A+ A + R ++ +
Sbjct: 164 GGKKPKDAEEAVDRIVRELEGLAL 187
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 91 KDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKV 150
K I+N+V S + I L+ + + Y+PE FPGL+YR K P LIF SGK+
Sbjct: 9 KTITIENVVASTAIGQEIDLKSVT-LALDGADYDPEQFPGLVYRTKDPKTAALIFRSGKI 67
Query: 151 VITGAKAREQIYAAFNNIY 169
V TGAK+ E + ++
Sbjct: 68 VCTGAKSIEDVDRGLKKVF 86
>gi|150400624|ref|YP_001324390.1| transcription factor [Methanococcus aeolicus Nankai-3]
gi|166227819|sp|A6UTF6.1|TBP_META3 RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|150013327|gb|ABR55778.1| TATA-box binding protein [Methanococcus aeolicus Nankai-3]
Length = 181
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 96/165 (58%), Gaps = 3/165 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I N+V + + +DL+ +A N+EY P +F + R+ +PK LIF SGK+ CTGA
Sbjct: 7 IVNVVVSTKIGDDIDLEYVADVLDNSEYEPEQFPGLVCRLSDPKVALLIFRSGKLNCTGA 66
Query: 65 KSESQAKLAARKYARIVQKIGFP-VQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KS+ A +A K +++ G + + K+QN+V + ++ L+ L+ + Y
Sbjct: 67 KSKEDAVIAINKVMEYLREAGLDLIDTPEVKVQNMVATAELGMEPNLDDLSTLER--TEY 124
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
EPE FPGL+YRM+ P V +L+F SGKVVITG K +E Y A I
Sbjct: 125 EPEQFPGLVYRMESPKVVLLVFGSGKVVITGLKNKEDAYIALEKI 169
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 92 DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVV 151
+ KI N+V S + I LE + S YEPE FPGL+ R+ P V +LIF SGK+
Sbjct: 4 EIKIVNVVVSTKIGDDIDLEYVADVLDN-SEYEPEQFPGLVCRLSDPKVALLIFRSGKLN 62
Query: 152 ITGAKAREQIYAAFNNIYPVL 172
TGAK++E A N + L
Sbjct: 63 CTGAKSKEDAVIAINKVMEYL 83
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
+QN+VAT L + +L ++ R EY P +F + R++ PK L+F SGK+V TG
Sbjct: 98 VQNMVATAELGMEPNLDDLSTLER-TEYEPEQFPGLVYRMESPKVVLLVFGSGKVVITGL 156
Query: 65 KSESQAKLAARKYARIVQKI 84
K++ A +A K V+++
Sbjct: 157 KNKEDAYIALEKIKNTVKEL 176
>gi|413933537|gb|AFW68088.1| TATA-binding protein2 isoform 1 [Zea mays]
gi|413933538|gb|AFW68089.1| TATA-binding protein2 isoform 2 [Zea mays]
Length = 78
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/71 (80%), Positives = 66/71 (92%)
Query: 6 QNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAK 65
+NIV+T+NL+CKLDLK IAL ARNAEYNP RF+AV MRI+EPKTTALIF+SGK+VCTGAK
Sbjct: 7 RNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAK 66
Query: 66 SESQAKLAARK 76
SE Q+KLAARK
Sbjct: 67 SEQQSKLAARK 77
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
F +NIV + +++ + L+ + A + Y P+ F +I R+++P T LIF SGK+V
Sbjct: 4 FHDRNIVSTVNLDCKLDLKAI-ALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVC 62
Query: 153 TGAKAREQ 160
TGAK+ +Q
Sbjct: 63 TGAKSEQQ 70
>gi|399574202|ref|ZP_10767962.1| tata binding protein of transcription factor tfiid [Halogranum
salarium B-1]
gi|399240710|gb|EJN61634.1| tata binding protein of transcription factor tfiid [Halogranum
salarium B-1]
Length = 186
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 92/166 (55%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+VA+ + +LDL+ +A A++NP F + R + PK ALIF SGKIVCTGA
Sbjct: 10 IQNVVASTGIGQELDLEALADDLPGADFNPDNFPGLVYRTQNPKAAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS A ++ + PV+ + +QNIV S D+ + L L G
Sbjct: 70 KSIDDVHEALDIIFDKLRGLSIPVEEDPEITVQNIVSSADLGHNLNLNALAIGLGLEDVE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YRM +P V +L+F SGK+VITG K + A I
Sbjct: 130 YEPEQFPGLVYRMDEPEVVILLFGSGKIVITGGKQTDDATTAVEQI 175
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIV++ +L L+L +A L + EY P +F + R+ EP+ L+F SGKIV T
Sbjct: 101 VQNIVSSADLGHNLNLNALAIGLGLEDVEYEPEQFPGLVYRMDEPEVVILLFGSGKIVIT 160
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
G K A A + ++ +G
Sbjct: 161 GGKQTDDATTAVEQIVERIENLGL 184
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
+IQN+V S + + LE L + + P+ FPGL+YR + P LIF SGK+V
Sbjct: 8 IEIQNVVASTGIGQELDLEAL-ADDLPGADFNPDNFPGLVYRTQNPKAAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIY 169
TGAK+ + ++ A + I+
Sbjct: 67 TGAKSIDDVHEALDIIF 83
>gi|448606630|ref|ZP_21659056.1| transcription factor [Haloferax sulfurifontis ATCC BAA-897]
gi|448622378|ref|ZP_21669072.1| transcription factor [Haloferax denitrificans ATCC 35960]
gi|445738838|gb|ELZ90350.1| transcription factor [Haloferax sulfurifontis ATCC BAA-897]
gi|445754460|gb|EMA05865.1| transcription factor [Haloferax denitrificans ATCC 35960]
Length = 189
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 98/166 (59%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +LDL+ +A+ A+Y+P +F + R +EPK+ ALIF SGKIVCTGA
Sbjct: 10 IENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQEPKSAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS + ++++ PV + +QNIV S D+ + L + G
Sbjct: 70 KSTDDVHESLEIVFDKLRELQIPVDDDPEITVQNIVTSADLGENLNLNAIAIGLGLENIE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ +P+V L+F SGK+VITG K + AA + I
Sbjct: 130 YEPEQFPGLVYRLDEPSVVALLFGSGKLVITGGKQPKDAEAAVDVI 175
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
I+N+V S + + L+ + + Y+PE FPGL+YR ++P LIF SGK+V
Sbjct: 8 INIENVVASTGIGQELDLQSV-AMDLEGADYDPEQFPGLVYRTQEPKSAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIY 169
TGAK+ + ++ + ++
Sbjct: 67 TGAKSTDDVHESLEIVF 83
>gi|448406902|ref|ZP_21573334.1| transcription factor [Halosimplex carlsbadense 2-9-1]
gi|445676708|gb|ELZ29225.1| transcription factor [Halosimplex carlsbadense 2-9-1]
Length = 186
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 95/166 (57%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +LDL+ +A+ A+Y+P +F + R +EPK+ ALIF SGKIVCTGA
Sbjct: 10 IENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQEPKSAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS + R ++ + V + +QNIV S D+ + L + G
Sbjct: 70 KSTDDVHESLRIVFDKLRDLNIQVDDDPEIVVQNIVTSADLGRNLNLNAIAIGLGLENIE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ P+V L+F SGK+VITG K E A + I
Sbjct: 130 YEPEQFPGLVYRLDDPDVVALLFGSGKLVITGGKQPEDAEEAVDKI 175
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 4 VIQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVC 61
V+QNIV + +L L+L IA L N EY P +F + R+ +P AL+F SGK+V
Sbjct: 100 VVQNIVTSADLGRNLNLNAIAIGLGLENIEYEPEQFPGLVYRLDDPDVVALLFGSGKLVI 159
Query: 62 TGAKSESQAKLAARKYARIVQKIGF 86
TG K A+ A K ++ +G
Sbjct: 160 TGGKQPEDAEEAVDKIVSRLEDLGL 184
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
I+N+V S + + L+ + + Y+PE FPGL+YR ++P LIF SGK+V
Sbjct: 8 INIENVVASTGIGQELDLQSV-AMDLEGADYDPEQFPGLVYRTQEPKSAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIYP---VLNVYVTYD 179
TGAK+ + ++ + ++ LN+ V D
Sbjct: 67 TGAKSTDDVHESLRIVFDKLRDLNIQVDDD 96
>gi|448576280|ref|ZP_21642323.1| transcription factor [Haloferax larsenii JCM 13917]
gi|448591579|ref|ZP_21651067.1| transcription factor [Haloferax elongans ATCC BAA-1513]
gi|445729960|gb|ELZ81554.1| transcription factor [Haloferax larsenii JCM 13917]
gi|445733553|gb|ELZ85122.1| transcription factor [Haloferax elongans ATCC BAA-1513]
Length = 186
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 94/166 (56%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+VA+ + +LDL+ +A A++NP F + R ++PK ALIF SGKIVCTGA
Sbjct: 10 IQNVVASTGIGQELDLEALADDLPGADFNPDNFPGLVYRTQDPKAAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS A ++++ PV + + +QNIV S D+ + L L G
Sbjct: 70 KSIDDVHEALGIIFDKLRELKIPVDDEPEITVQNIVSSADLGHNLNLNALAIGLGLEDVE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YRM +P V +L+F SGK+VITG K + A I
Sbjct: 130 YEPEQFPGLVYRMDEPKVVILLFGSGKIVITGGKRTDDAETAVEEI 175
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIV++ +L L+L +A L + EY P +F + R+ EPK L+F SGKIV T
Sbjct: 101 VQNIVSSADLGHNLNLNALAIGLGLEDVEYEPEQFPGLVYRMDEPKVVILLFGSGKIVIT 160
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
G K A+ A + + +G
Sbjct: 161 GGKRTDDAETAVEEIVERIDALGL 184
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
+IQN+V S + + LE L + + P+ FPGL+YR + P LIF SGK+V
Sbjct: 8 IEIQNVVASTGIGQELDLEAL-ADDLPGADFNPDNFPGLVYRTQDPKAAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIY 169
TGAK+ + ++ A I+
Sbjct: 67 TGAKSIDDVHEALGIIF 83
>gi|292655873|ref|YP_003535770.1| TATA-binding transcription initiation factor [Haloferax volcanii
DS2]
gi|433422047|ref|ZP_20405902.1| transcription factor [Haloferax sp. BAB2207]
gi|448289862|ref|ZP_21481024.1| transcription factor [Haloferax volcanii DS2]
gi|448539630|ref|ZP_21623096.1| transcription factor [Haloferax sp. ATCC BAA-646]
gi|448555929|ref|ZP_21631787.1| transcription factor [Haloferax sp. ATCC BAA-644]
gi|448562556|ref|ZP_21635514.1| transcription factor [Haloferax prahovense DSM 18310]
gi|448570482|ref|ZP_21639312.1| transcription factor [Haloferax lucentense DSM 14919]
gi|448585086|ref|ZP_21647695.1| transcription factor [Haloferax gibbonsii ATCC 33959]
gi|448595442|ref|ZP_21653145.1| transcription factor [Haloferax alexandrinus JCM 10717]
gi|302595861|sp|D4H071.1|TBP2_HALVD RecName: Full=TATA-box-binding protein 2; AltName: Full=Box
A-binding protein 2; Short=BAP 2; AltName: Full=TATA
sequence-binding protein 2; Short=TBP 2; AltName:
Full=TATA-box factor 2
gi|291372685|gb|ADE04912.1| TATA-binding transcription initiation factor [Haloferax volcanii
DS2]
gi|432198733|gb|ELK54984.1| transcription factor [Haloferax sp. BAB2207]
gi|445581044|gb|ELY35408.1| transcription factor [Haloferax volcanii DS2]
gi|445710372|gb|ELZ62187.1| transcription factor [Haloferax sp. ATCC BAA-646]
gi|445717214|gb|ELZ68934.1| transcription factor [Haloferax sp. ATCC BAA-644]
gi|445718874|gb|ELZ70558.1| transcription factor [Haloferax prahovense DSM 18310]
gi|445723129|gb|ELZ74776.1| transcription factor [Haloferax lucentense DSM 14919]
gi|445727425|gb|ELZ79038.1| transcription factor [Haloferax gibbonsii ATCC 33959]
gi|445742896|gb|ELZ94386.1| transcription factor [Haloferax alexandrinus JCM 10717]
Length = 186
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 94/166 (56%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+VA+ + +LDL+ +A A++NP F + R ++PK ALIF SGKIVCTGA
Sbjct: 10 IQNVVASTGIGQELDLEALADDLPGADFNPDNFPGLVYRTQDPKAAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS A ++++ PV + + +QNIV S D+ + L L G
Sbjct: 70 KSIDDVHDALGIIFDKLRELKIPVDDEPEITVQNIVSSADLGHNLNLNALAIGLGLEDVE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YRM +P V +L+F SGK+VITG K + A I
Sbjct: 130 YEPEQFPGLVYRMDEPKVVILLFGSGKIVITGGKRTDDAETAVEEI 175
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIV++ +L L+L +A L + EY P +F + R+ EPK L+F SGKIV T
Sbjct: 101 VQNIVSSADLGHNLNLNALAIGLGLEDVEYEPEQFPGLVYRMDEPKVVILLFGSGKIVIT 160
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
G K A+ A + + +G
Sbjct: 161 GGKRTDDAETAVEEIVERIDALGL 184
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
+IQN+V S + + LE L + + P+ FPGL+YR + P LIF SGK+V
Sbjct: 8 IEIQNVVASTGIGQELDLEAL-ADDLPGADFNPDNFPGLVYRTQDPKAAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIY 169
TGAK+ + ++ A I+
Sbjct: 67 TGAKSIDDVHDALGIIF 83
>gi|448493598|ref|ZP_21609110.1| transcription factor [Halorubrum californiensis DSM 19288]
gi|445690153|gb|ELZ42373.1| transcription factor [Halorubrum californiensis DSM 19288]
Length = 186
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 91/158 (57%), Gaps = 2/158 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+VA+ + +LDL+ +A A++NP F + R +EPK ALIF SGKIVCTGA
Sbjct: 10 IQNVVASTGIGQELDLEALAEDLPGADFNPDNFPGLVYRTQEPKAAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS A ++ + PV+ + +QNIV S D+ + L L G
Sbjct: 70 KSIDDVHDALGIIFEKLRGLQIPVEDDPEITVQNIVSSADLGHNLNLNALAIGLGLEDVE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQ 160
YEPE FPGL+YRM +P V +L+F SGK+VITG K +
Sbjct: 130 YEPEQFPGLVYRMDEPEVVILLFGSGKIVITGGKQTDD 167
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
+IQN+V S + + LE L + + P+ FPGL+YR ++P LIF SGK+V
Sbjct: 8 IEIQNVVASTGIGQELDLEAL-AEDLPGADFNPDNFPGLVYRTQEPKAAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIY 169
TGAK+ + ++ A I+
Sbjct: 67 TGAKSIDDVHDALGIIF 83
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIV++ +L L+L +A L + EY P +F + R+ EP+ L+F SGKIV T
Sbjct: 101 VQNIVSSADLGHNLNLNALAIGLGLEDVEYEPEQFPGLVYRMDEPEVVILLFGSGKIVIT 160
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
G K A+ A + ++ +G
Sbjct: 161 GGKQTDDAEEAVEEIVERIEGLGL 184
>gi|88601869|ref|YP_502047.1| transcription factor [Methanospirillum hungatei JF-1]
gi|88187331|gb|ABD40328.1| TATA binding protein of transcription factor TFIID
[Methanospirillum hungatei JF-1]
Length = 186
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 95/158 (60%), Gaps = 2/158 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVA+ + LDL +IA ++AEYN RF V +R++ PK AL+F SGK+V TGA
Sbjct: 11 IENIVASAKISESLDLPQIASSIKDAEYNKKRFPGVVIRMQNPKIAALVFGSGKVVLTGA 70
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS +++ + + + +KIQNIV S D+ I L ++ GF+
Sbjct: 71 KSVESLNKGLEILGDLLRSLNIEIASELTYKIQNIVTSADLGSGINLNKIAVGFNLERIE 130
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQ 160
YEPE FPGL+YR++ P V +L+F SGK++ITG K E
Sbjct: 131 YEPEQFPGLVYRLEDPKVVVLLFGSGKLIITGGKEPED 168
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIAL--HARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
IQNIV + +L ++L KIA+ + EY P +F + R+++PK L+F SGK++ T
Sbjct: 102 IQNIVTSADLGSGINLNKIAVGFNLERIEYEPEQFPGLVYRLEDPKVVVLLFGSGKLIIT 161
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
G K AK A K ++ +G
Sbjct: 162 GGKEPEDAKKAVLKIVDDLKGLGL 185
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
+I+NIV S + + L ++ + Y + FPG++ RM+ P + L+F SGKVV+
Sbjct: 9 LRIENIVASAKISESLDLPQI-ASSIKDAEYNKKRFPGVVIRMQNPKIAALVFGSGKVVL 67
Query: 153 TGAKAREQI 161
TGAK+ E +
Sbjct: 68 TGAKSVESL 76
>gi|448433649|ref|ZP_21585976.1| transcription factor [Halorubrum tebenquichense DSM 14210]
gi|445686241|gb|ELZ38577.1| transcription factor [Halorubrum tebenquichense DSM 14210]
Length = 186
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 96/170 (56%), Gaps = 1/170 (0%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
++N+VA+ + +LDL+ +A+ A+Y+P +F + R +PK+ ALIF SGKIVCTGA
Sbjct: 11 VENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTADPKSAALIFRSGKIVCTGA 70
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFSTY 123
S + ++ + P++ + +QNIV S D+ + L + G Y
Sbjct: 71 NSIEAVHGSLDIVFEELRALQIPIEDPEITVQNIVTSADLGESLNLNAIAIGLGLEHIEY 130
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
EPE FPGL+YR+ +P V L+F SGKVV+TG + AA + I LN
Sbjct: 131 EPEQFPGLVYRLDEPEVVALLFGSGKVVVTGGTSPADAEAAVDVIVEELN 180
>gi|393796304|ref|ZP_10379668.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Candidatus Nitrosoarchaeum limnia BG20]
Length = 186
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 101/169 (59%), Gaps = 2/169 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I N+VA+ ++ KLDL I + EY+P +F R+K PKT L+FSSGK+VCTGA
Sbjct: 10 IVNVVASATIDQKLDLVDITKKFPDVEYHPEQFPGAVFRLKNPKTATLLFSSGKMVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KS+ A+ A K +++K ++ + + IQNIV S ++ + LE+ S Y
Sbjct: 70 KSQELAETAVAKVVSMLKKGKIKIKNEAEVTIQNIVSSINLGGRVNLEQ-AARTLPRSMY 128
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPE FPGLI+RM P +LIF SGK+V GAK + ++ + N I+ +L
Sbjct: 129 EPEQFPGLIHRMLDPKTVILIFSSGKLVCVGAKLEKDVHRSVNQIHSLL 177
>gi|330507959|ref|YP_004384387.1| transcription factor TFIID [Methanosaeta concilii GP6]
gi|328928767|gb|AEB68569.1| transcription factor TFIID [Methanosaeta concilii GP6]
Length = 183
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 95/159 (59%), Gaps = 3/159 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ L + DL KI AEYN +F + R+K P+ LIF+SGK+VCTGA
Sbjct: 7 IENVVASTKLAEEFDLHKIEAELEGAEYNKEKFPGLVYRVKAPRAAFLIFTSGKVVCTGA 66
Query: 65 KSESQAKLAARKYARIVQKIGFP-VQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFS 121
K+ + A+ ++ IGF + + + +QNIV S D++ + L + G
Sbjct: 67 KNVEDVRTVITNMAQTLKSIGFENIDLEPEIHVQNIVASADLKTDLNLNAIALGLGLENI 126
Query: 122 TYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQ 160
YEPE FPGL+YR+K P V +LIF SGK+V+TG K+ E+
Sbjct: 127 EYEPEQFPGLVYRIKTPKVVVLIFSSGKLVVTGGKSPEE 165
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIALHA--RNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIVA+ +L+ L+L IAL N EY P +F + RIK PK LIFSSGK+V T
Sbjct: 99 VQNIVASADLKTDLNLNAIALGLGLENIEYEPEQFPGLVYRIKTPKVVVLIFSSGKLVVT 158
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
G KS + + + ++ +G
Sbjct: 159 GGKSPEECEEGVKIVREQLENMGL 182
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 95 IQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITG 154
I+N+V S + L ++ + Y E FPGL+YR+K P LIF SGKVV TG
Sbjct: 7 IENVVASTKLAEEFDLHKIEA-ELEGAEYNKEKFPGLVYRVKAPRAAFLIFTSGKVVCTG 65
Query: 155 AKAREQIYAAFNNIYPVL 172
AK E + N+ L
Sbjct: 66 AKNVEDVRTVITNMAQTL 83
>gi|407463138|ref|YP_006774455.1| TATA-box binding family protein [Candidatus Nitrosopumilus
koreensis AR1]
gi|407046760|gb|AFS81513.1| TATA-box binding family protein [Candidatus Nitrosopumilus
koreensis AR1]
Length = 187
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 110/182 (60%), Gaps = 10/182 (5%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
++N+VA+ +++ K+DL +I + EY+P +F + R+K P+T LIF +GK+VCTGA
Sbjct: 10 VENVVASASVDQKIDLNEITEKFPDTEYHPEQFPGLVFRLKSPRTATLIFRTGKMVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKI-GFPVQFKD---FKIQNIVGSCDVEFPIKLERLNGFHAMF 120
KSE ++A + +VQK+ ++ K+ +QNIV + ++ I LE+
Sbjct: 70 KSE---EMAIKAVNTVVQKLRKGKIKIKNDAVITVQNIVAAINLGGKIHLEKA-ARTLPR 125
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNV--YVTY 178
S YEPE FPGLI+RM P +L+F SGK+V TGAK +Y + +N++ VL + Y
Sbjct: 126 SMYEPEQFPGLIHRMLDPKTVILLFASGKLVCTGAKKESDVYRSVHNLHSVLEEKNLMIY 185
Query: 179 DQ 180
DQ
Sbjct: 186 DQ 187
>gi|448428387|ref|ZP_21584257.1| transcription factor [Halorubrum terrestre JCM 10247]
gi|448429752|ref|ZP_21584617.1| transcription factor [Halorubrum tebenquichense DSM 14210]
gi|448439730|ref|ZP_21588142.1| transcription factor [Halorubrum saccharovorum DSM 1137]
gi|448453748|ref|ZP_21594091.1| transcription factor [Halorubrum litoreum JCM 13561]
gi|448454831|ref|ZP_21594311.1| transcription factor [Halorubrum lipolyticum DSM 21995]
gi|448474251|ref|ZP_21602110.1| transcription factor [Halorubrum aidingense JCM 13560]
gi|448485769|ref|ZP_21606914.1| transcription factor [Halorubrum arcis JCM 13916]
gi|448511919|ref|ZP_21616298.1| transcription factor [Halorubrum distributum JCM 9100]
gi|448519932|ref|ZP_21618139.1| transcription factor [Halorubrum distributum JCM 10118]
gi|448537266|ref|ZP_21622541.1| transcription factor [Halorubrum hochstenium ATCC 700873]
gi|445676556|gb|ELZ29076.1| transcription factor [Halorubrum terrestre JCM 10247]
gi|445689808|gb|ELZ42032.1| transcription factor [Halorubrum tebenquichense DSM 14210]
gi|445690882|gb|ELZ43085.1| transcription factor [Halorubrum saccharovorum DSM 1137]
gi|445694753|gb|ELZ46872.1| transcription factor [Halorubrum distributum JCM 9100]
gi|445702110|gb|ELZ54073.1| transcription factor [Halorubrum hochstenium ATCC 700873]
gi|445703496|gb|ELZ55426.1| transcription factor [Halorubrum distributum JCM 10118]
gi|445807548|gb|EMA57633.1| transcription factor [Halorubrum litoreum JCM 13561]
gi|445814514|gb|EMA64476.1| transcription factor [Halorubrum lipolyticum DSM 21995]
gi|445817468|gb|EMA67342.1| transcription factor [Halorubrum arcis JCM 13916]
gi|445817558|gb|EMA67427.1| transcription factor [Halorubrum aidingense JCM 13560]
Length = 186
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 90/154 (58%), Gaps = 2/154 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+VA+ + +LDL+ +A A++NP F + R +EPK ALIF SGKIVCTGA
Sbjct: 10 IQNVVASTGIGQELDLEALAEDLPGADFNPDNFPGLVYRTQEPKAAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS A ++ + PV+ + +QNIV S D+ + L L G
Sbjct: 70 KSIDDVHEALGIIFEKLRGLQIPVEDDPEITVQNIVSSADLGHNLNLNALAIGLGLEDVE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAK 156
YEPE FPGL+YRM +P V +L+F SGK+VITG K
Sbjct: 130 YEPEQFPGLVYRMDEPEVVILLFGSGKIVITGGK 163
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
+IQN+V S + + LE L + + P+ FPGL+YR ++P LIF SGK+V
Sbjct: 8 IEIQNVVASTGIGQELDLEAL-AEDLPGADFNPDNFPGLVYRTQEPKAAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIY 169
TGAK+ + ++ A I+
Sbjct: 67 TGAKSIDDVHEALGIIF 83
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIV++ +L L+L +A L + EY P +F + R+ EP+ L+F SGKIV T
Sbjct: 101 VQNIVSSADLGHNLNLNALAIGLGLEDVEYEPEQFPGLVYRMDEPEVVILLFGSGKIVIT 160
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
G K A+ A + ++ +G
Sbjct: 161 GGKRTDDAEEAVEEIVERIEGLGL 184
>gi|448462784|ref|ZP_21597843.1| transcription factor [Halorubrum kocurii JCM 14978]
gi|445818005|gb|EMA67873.1| transcription factor [Halorubrum kocurii JCM 14978]
Length = 185
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 98/170 (57%), Gaps = 1/170 (0%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +LDL+ +A+ A+Y+P +F + R +PK+ ALIF SGKIVCTGA
Sbjct: 10 IENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTTDPKSAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFSTY 123
S + ++ + P++ + +QNIV S D+ + L + G Y
Sbjct: 70 NSIDAVHESLALVFDELRALQIPIEDPEITVQNIVTSADLGESLNLNAIAIGLGLEHIEY 129
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
EPE FPGL+YR+ +P+V L+F SGK+V+TG + + AA + I L+
Sbjct: 130 EPEQFPGLVYRIDEPDVVALLFGSGKLVVTGGTSPDDAAAAVDVIVEELD 179
>gi|448335944|ref|ZP_21525067.1| transcription factor [Natrinema pellirubrum DSM 15624]
gi|448404754|ref|ZP_21572552.1| transcription factor [Haloterrigena limicola JCM 13563]
gi|445614729|gb|ELY68395.1| transcription factor [Natrinema pellirubrum DSM 15624]
gi|445663265|gb|ELZ16018.1| transcription factor [Haloterrigena limicola JCM 13563]
Length = 186
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 91/157 (57%), Gaps = 2/157 (1%)
Query: 2 APVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVC 61
+P I+N+VA+ ++ +L+L+ +A +Y+ RF R + PK+ ALIF SGKIVC
Sbjct: 7 SPTIENVVASTGVDRELNLEAVAEDLDGTDYDQERFPGAVYRTQNPKSAALIFRSGKIVC 66
Query: 62 TGAKSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAM 119
TGAKS + ++ +G V + IQNIV S D+ + L + GF
Sbjct: 67 TGAKSTDDVYESLNIVFDELRGLGIDVPSNPEITIQNIVSSGDLGSAVNLNAIAIGFGLE 126
Query: 120 FSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAK 156
YEPE FPGL+YRM PNV LIF SGKVV+TGAK
Sbjct: 127 NIEYEPEQFPGLVYRMDDPNVVTLIFGSGKVVVTGAK 163
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 95 IQNIVGSCDVEFPIKLE----RLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKV 150
I+N+V S V+ + LE L+G + Y+ E FPG +YR + P LIF SGK+
Sbjct: 10 IENVVASTGVDRELNLEAVAEDLDG-----TDYDQERFPGAVYRTQNPKSAALIFRSGKI 64
Query: 151 VITGAKAREQIYAAFNNIYPVL 172
V TGAK+ + +Y + N ++ L
Sbjct: 65 VCTGAKSTDDVYESLNIVFDEL 86
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIALH--ARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
IQNIV++ +L ++L IA+ N EY P +F + R+ +P LIF SGK+V T
Sbjct: 101 IQNIVSSGDLGSAVNLNAIAIGFGLENIEYEPEQFPGLVYRMDDPNVVTLIFGSGKVVVT 160
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
GAK + A A + + ++G
Sbjct: 161 GAKEPADAGRALDVISSRLDELGL 184
>gi|292654337|ref|YP_003534234.1| TATA-binding transcription initiation factor [Haloferax volcanii
DS2]
gi|433428869|ref|ZP_20407252.1| transcription factor [Haloferax sp. BAB2207]
gi|448293881|ref|ZP_21483984.1| transcription factor [Haloferax volcanii DS2]
gi|448543937|ref|ZP_21625398.1| transcription factor [Haloferax sp. ATCC BAA-646]
gi|448551097|ref|ZP_21629239.1| transcription factor [Haloferax sp. ATCC BAA-645]
gi|448558528|ref|ZP_21633085.1| transcription factor [Haloferax sp. ATCC BAA-644]
gi|448573579|ref|ZP_21641062.1| transcription factor [Haloferax lucentense DSM 14919]
gi|448597726|ref|ZP_21654651.1| transcription factor [Haloferax alexandrinus JCM 10717]
gi|302595869|sp|D4GZA2.1|TBP1_HALVD RecName: Full=TATA-box-binding protein 1; AltName: Full=Box
A-binding protein 1; Short=BAP 1; AltName: Full=TATA
sequence-binding protein 1; Short=TBP 1; AltName:
Full=TATA-box factor 1
gi|291371886|gb|ADE04113.1| TATA-binding transcription initiation factor [Haloferax volcanii
DS2]
gi|432195411|gb|ELK51946.1| transcription factor [Haloferax sp. BAB2207]
gi|445569802|gb|ELY24373.1| transcription factor [Haloferax volcanii DS2]
gi|445706079|gb|ELZ57966.1| transcription factor [Haloferax sp. ATCC BAA-646]
gi|445710653|gb|ELZ62451.1| transcription factor [Haloferax sp. ATCC BAA-645]
gi|445712280|gb|ELZ64062.1| transcription factor [Haloferax sp. ATCC BAA-644]
gi|445718485|gb|ELZ70175.1| transcription factor [Haloferax lucentense DSM 14919]
gi|445739187|gb|ELZ90696.1| transcription factor [Haloferax alexandrinus JCM 10717]
Length = 189
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 97/166 (58%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +LDL+ +A+ A+Y+P +F + R +EPK+ ALIF SGKIVCTGA
Sbjct: 10 IENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQEPKSAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS + ++++ PV + +QNIV S D+ + L + G
Sbjct: 70 KSTDDVHESLEIVFDKLRELQIPVDDDPEITVQNIVTSADLGENLNLNAIAIGLGLENIE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ +P+V L+F SGK+VITG K AA + I
Sbjct: 130 YEPEQFPGLVYRLDEPSVVALLFGSGKLVITGGKQPTDAEAAVDVI 175
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
I+N+V S + + L+ + + Y+PE FPGL+YR ++P LIF SGK+V
Sbjct: 8 INIENVVASTGIGQELDLQSV-AMDLEGADYDPEQFPGLVYRTQEPKSAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIY 169
TGAK+ + ++ + ++
Sbjct: 67 TGAKSTDDVHESLEIVF 83
>gi|222479944|ref|YP_002566181.1| transcription factor [Halorubrum lacusprofundi ATCC 49239]
gi|222452846|gb|ACM57111.1| TATA-box binding family protein [Halorubrum lacusprofundi ATCC
49239]
Length = 186
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 90/154 (58%), Gaps = 2/154 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+VA+ + +LDL+ +A A++NP F + R +EPK ALIF SGKIVCTGA
Sbjct: 10 IQNVVASTGIGQELDLEALAEDLPGADFNPDNFPGLVYRTQEPKAAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS A ++ + PV+ + +QNIV S D+ + L L G
Sbjct: 70 KSIDDVHEALGIIFEKLRGLQIPVEEDPEITVQNIVSSADLGHNLNLNALAIGLGLEDVE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAK 156
YEPE FPGL+YRM +P V +L+F SGK+VITG K
Sbjct: 130 YEPEQFPGLVYRMDEPEVVILLFGSGKIVITGGK 163
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
+IQN+V S + + LE L + + P+ FPGL+YR ++P LIF SGK+V
Sbjct: 8 IEIQNVVASTGIGQELDLEAL-AEDLPGADFNPDNFPGLVYRTQEPKAAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIY 169
TGAK+ + ++ A I+
Sbjct: 67 TGAKSIDDVHEALGIIF 83
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIV++ +L L+L +A L + EY P +F + R+ EP+ L+F SGKIV T
Sbjct: 101 VQNIVSSADLGHNLNLNALAIGLGLEDVEYEPEQFPGLVYRMDEPEVVILLFGSGKIVIT 160
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
G K A+ A + ++ +G
Sbjct: 161 GGKRTDDAEEAVEEIVERIEGLGL 184
>gi|145518309|ref|XP_001445032.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412465|emb|CAK77635.1| unnamed protein product [Paramecium tetraurelia]
Length = 180
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 95/151 (62%), Gaps = 3/151 (1%)
Query: 17 KLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARK 76
KLDL +A ++N EY SRF A+ RIK+PK+TALIF +GK+V TG K +++A+ AA K
Sbjct: 11 KLDLDNLAHTSQNCEYKKSRFPALIQRIKDPKSTALIFEAGKMVITGTKGQNEAEEAANK 70
Query: 77 YARIVQKIG-FPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFS--TYEPELFPGLIY 133
+ + ++K +Q D + NIV + + + + L ++N ++ +Y+ FPGLIY
Sbjct: 71 FKKQIEKNNRISIQIGDIQTSNIVANSQLPYEVNLMKINDDRSLQGSISYDRSAFPGLIY 130
Query: 134 RMKKPNVTMLIFLSGKVVITGAKAREQIYAA 164
+M+ P + LIF SGK+V TGAK QI A
Sbjct: 131 KMQNPKLAALIFYSGKIVFTGAKNETQIKDA 161
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 7 NIVATINLECKLDLKKI----ALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
NIVA L +++L KI +L + Y+ S F + +++ PK ALIF SGKIV T
Sbjct: 92 NIVANSQLPYEVNLMKINDDRSLQG-SISYDRSAFPGLIYKMQNPKLAALIFYSGKIVFT 150
Query: 63 GAKSESQAKLAA 74
GAK+E+Q K A+
Sbjct: 151 GAKNETQIKDAS 162
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%)
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFN 166
Y+ FP LI R+K P T LIF +GK+VITG K + + A N
Sbjct: 26 YKKSRFPALIQRIKDPKSTALIFEAGKMVITGTKGQNEAEEAAN 69
>gi|383318805|ref|YP_005379646.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Methanocella conradii HZ254]
gi|379320175|gb|AFC99127.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Methanocella conradii HZ254]
Length = 188
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 94/166 (56%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + ++DLK + L A+Y+P +F + R K+PKT ALIF SGKIVCTGA
Sbjct: 13 IENVVASTAIGQEIDLKSVTLALEGADYDPEQFPGLVYRTKDPKTAALIFRSGKIVCTGA 72
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS +K + + +G V + +QNIV S D+ + L + G
Sbjct: 73 KSIEDVDRGLKKVFKKIASVGIKVDPNPEITVQNIVASADLGSVLNLNAIAIGLGLENIE 132
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ P V +L+F SGK+V+TG K + A I
Sbjct: 133 YEPEQFPGLVYRLDSPKVVVLLFGSGKLVVTGGKKPKDAEEAVERI 178
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 91 KDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKV 150
K I+N+V S + I L+ + + Y+PE FPGL+YR K P LIF SGK+
Sbjct: 9 KTITIENVVASTAIGQEIDLKSVT-LALEGADYDPEQFPGLVYRTKDPKTAALIFRSGKI 67
Query: 151 VITGAKAREQIYAAFNNIY 169
V TGAK+ E + ++
Sbjct: 68 VCTGAKSIEDVDRGLKKVF 86
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIVA+ +L L+L IA L N EY P +F + R+ PK L+F SGK+V T
Sbjct: 104 VQNIVASADLGSVLNLNAIAIGLGLENIEYEPEQFPGLVYRLDSPKVVVLLFGSGKLVVT 163
Query: 63 GAKSESQAKLAARKYARIVQKI 84
G K A+ A RIV+++
Sbjct: 164 GGKKPKDAEEAVE---RIVKEL 182
>gi|448536157|ref|ZP_21622402.1| transcription factor [Halorubrum hochstenium ATCC 700873]
gi|445702600|gb|ELZ54544.1| transcription factor [Halorubrum hochstenium ATCC 700873]
Length = 186
Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 96/170 (56%), Gaps = 1/170 (0%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
++N+VA+ + +LDL+ +A+ A+Y+P +F + R +PK+ ALIF SGKIVCTGA
Sbjct: 11 VENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTADPKSAALIFRSGKIVCTGA 70
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFSTY 123
S + ++ + P++ + +QNIV S D+ + L + G Y
Sbjct: 71 NSIEAVHGSLDIVFEELRALQIPIEDPEITVQNIVTSADLGKSLNLNAIAIGLGLEHIEY 130
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
EPE FPGL+YR+ +P V L+F SGKVV+TG + AA + I LN
Sbjct: 131 EPEQFPGLVYRLDEPEVVALLFGSGKVVVTGGTSPADAEAAVDVIVEELN 180
>gi|448316921|ref|ZP_21506499.1| transcription factor [Natronococcus jeotgali DSM 18795]
gi|445606151|gb|ELY60056.1| transcription factor [Natronococcus jeotgali DSM 18795]
Length = 186
Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 93/162 (57%), Gaps = 1/162 (0%)
Query: 6 QNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAK 65
+N+VA+ + + DL+ +A NA+Y+P+ F + R+ P++ LIF +GKIVCTGAK
Sbjct: 11 ENVVASGDTGREFDLQALADDLNNAQYDPNTFPGIVYRMDNPQSAGLIFHTGKIVCTGAK 70
Query: 66 SESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFSTYE 124
S +A ++++G V+ F IQNIV S D+ + L + G YE
Sbjct: 71 SVEDINKSAETIFNALKQLGIAVEENPFTIQNIVSSADLGCSLNLNAVAIGLGLGQIEYE 130
Query: 125 PELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFN 166
PE FPGL+YR+ KP+V +L+F SGK VITG + A N
Sbjct: 131 PEQFPGLVYRLDKPDVVVLLFGSGKAVITGGTEIQDAATAVN 172
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 96 QNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGA 155
+N+V S D L+ L + Y+P FPG++YRM P LIF +GK+V TGA
Sbjct: 11 ENVVASGDTGREFDLQAL-ADDLNNAQYDPNTFPGIVYRMDNPQSAGLIFHTGKIVCTGA 69
Query: 156 KAREQIYAAFNNIYPVL 172
K+ E I + I+ L
Sbjct: 70 KSVEDINKSAETIFNAL 86
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
IQNIV++ +L C L+L +A L EY P +F + R+ +P L+F SGK V T
Sbjct: 100 IQNIVSSADLGCSLNLNAVAIGLGLGQIEYEPEQFPGLVYRLDKPDVVVLLFGSGKAVIT 159
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
G A A ++ +G
Sbjct: 160 GGTEIQDAATAVNVIISKLENVGL 183
>gi|354609688|ref|ZP_09027644.1| TATA-box-binding protein [Halobacterium sp. DL1]
gi|353194508|gb|EHB60010.1| TATA-box-binding protein [Halobacterium sp. DL1]
Length = 186
Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 97/166 (58%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
++N+VA+ + +LDL+ +A+ A+Y+P +F + R +EPK+ ALIF SGKIVCTGA
Sbjct: 10 VENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQEPKSAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS + R ++ + V+ + + +QNIV S D+ + L + G
Sbjct: 70 KSTDDVHESLRIVFDKLRDLSIKVEDEPEIVVQNIVTSADLGRQLNLNAIAIGLGLENIE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ +P V L+F SGK+VITG K E A + I
Sbjct: 130 YEPEQFPGLVYRLDEPEVVALLFGSGKLVITGGKKPEDAEHAVDKI 175
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 4 VIQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVC 61
V+QNIV + +L +L+L IA L N EY P +F + R+ EP+ AL+F SGK+V
Sbjct: 100 VVQNIVTSADLGRQLNLNAIAIGLGLENIEYEPEQFPGLVYRLDEPEVVALLFGSGKLVI 159
Query: 62 TGAKSESQAKLAARKYARIVQKIGF 86
TG K A+ A K ++++G
Sbjct: 160 TGGKKPEDAEHAVDKIVSRLEELGL 184
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
++N+V S + + L+ + + Y+PE FPGL+YR ++P LIF SGK+V
Sbjct: 8 INVENVVASTGIGQELDLQSV-AMDLEGADYDPEQFPGLVYRTQEPKSAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIYPVL 172
TGAK+ + ++ + ++ L
Sbjct: 67 TGAKSTDDVHESLRIVFDKL 86
>gi|433593455|ref|YP_007296196.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Natrinema pellirubrum DSM 15624]
gi|433307965|gb|AGB33776.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Natrinema pellirubrum DSM 15624]
Length = 193
Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 91/157 (57%), Gaps = 2/157 (1%)
Query: 2 APVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVC 61
+P I+N+VA+ ++ +L+L+ +A +Y+ RF R + PK+ ALIF SGKIVC
Sbjct: 14 SPTIENVVASTGVDRELNLEAVAEDLDGTDYDQERFPGAVYRTQNPKSAALIFRSGKIVC 73
Query: 62 TGAKSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAM 119
TGAKS + ++ +G V + IQNIV S D+ + L + GF
Sbjct: 74 TGAKSTDDVYESLNIVFDELRGLGIDVPSNPEITIQNIVSSGDLGSAVNLNAIAIGFGLE 133
Query: 120 FSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAK 156
YEPE FPGL+YRM PNV LIF SGKVV+TGAK
Sbjct: 134 NIEYEPEQFPGLVYRMDDPNVVTLIFGSGKVVVTGAK 170
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Query: 80 IVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLE----RLNGFHAMFSTYEPELFPGLIYRM 135
++ IG I+N+V S V+ + LE L+G + Y+ E FPG +YR
Sbjct: 2 LILHIGMITSEHSPTIENVVASTGVDRELNLEAVAEDLDG-----TDYDQERFPGAVYRT 56
Query: 136 KKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
+ P LIF SGK+V TGAK+ + +Y + N ++ L
Sbjct: 57 QNPKSAALIFRSGKIVCTGAKSTDDVYESLNIVFDEL 93
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIALH--ARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
IQNIV++ +L ++L IA+ N EY P +F + R+ +P LIF SGK+V T
Sbjct: 108 IQNIVSSGDLGSAVNLNAIAIGFGLENIEYEPEQFPGLVYRMDDPNVVTLIFGSGKVVVT 167
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
GAK + A A + + ++G
Sbjct: 168 GAKEPADAGRALDVISSRLDELGL 191
>gi|448414415|ref|ZP_21577484.1| transcription factor [Halosarcina pallida JCM 14848]
gi|445681981|gb|ELZ34405.1| transcription factor [Halosarcina pallida JCM 14848]
Length = 186
Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 92/162 (56%), Gaps = 2/162 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+VA+ + +LDL+ +A A++NP F + R ++PK ALIF SGKIVCTGA
Sbjct: 10 IQNVVASTGIGQELDLEALADDLPGADFNPDNFPGLVYRTQDPKAAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS A ++ + PV + + +QNIV S D+ + L L G
Sbjct: 70 KSIDDVHEALGIIFDKLRGLSIPVDEDPEITVQNIVSSADLGHNLNLNALAIGLGLEDVE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAA 164
YEPE FPGL+YRM +P V +L+F SGK+VITG K + A
Sbjct: 130 YEPEQFPGLVYRMDEPEVVILLFGSGKIVITGGKQTDDAETA 171
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIV++ +L L+L +A L + EY P +F + R+ EP+ L+F SGKIV T
Sbjct: 101 VQNIVSSADLGHNLNLNALAIGLGLEDVEYEPEQFPGLVYRMDEPEVVILLFGSGKIVIT 160
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
G K A+ A + + + +G
Sbjct: 161 GGKQTDDAETAVVEIVKRIDNLGL 184
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
+IQN+V S + + LE L + + P+ FPGL+YR + P LIF SGK+V
Sbjct: 8 IEIQNVVASTGIGQELDLEAL-ADDLPGADFNPDNFPGLVYRTQDPKAAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIY 169
TGAK+ + ++ A I+
Sbjct: 67 TGAKSIDDVHEALGIIF 83
>gi|355572992|ref|ZP_09043960.1| TATA-box-binding protein [Methanolinea tarda NOBI-1]
gi|354824004|gb|EHF08263.1| TATA-box-binding protein [Methanolinea tarda NOBI-1]
Length = 186
Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 97/166 (58%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVA+ + LDL +A ++AEYN RF V +R+++PK AL+F SGK+V TGA
Sbjct: 11 IENIVASAKVTDYLDLPALASQIKDAEYNKKRFPGVVIRMQQPKIAALVFGSGKVVLTGA 70
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS +++ + + K +KIQNIV S D+ I L ++ GF+
Sbjct: 71 KSIESLSQGLEILGNLLRGLNIDIPKKLTYKIQNIVTSADLGSGINLNKIAVGFNLDRIE 130
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR++ P V +L+F SGK++ITG K E A I
Sbjct: 131 YEPEQFPGLVYRLENPKVVVLLFGSGKLIITGGKEPEDARKAVQKI 176
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIAL--HARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
IQNIV + +L ++L KIA+ + EY P +F + R++ PK L+F SGK++ T
Sbjct: 102 IQNIVTSADLGSGINLNKIAVGFNLDRIEYEPEQFPGLVYRLENPKVVVLLFGSGKLIIT 161
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
G K A+ A +K ++ +G
Sbjct: 162 GGKEPEDARKAVQKILTDLKNLGL 185
>gi|313126218|ref|YP_004036488.1| tata binding protein of transcription factor tfiid [Halogeometricum
borinquense DSM 11551]
gi|448286060|ref|ZP_21477295.1| transcription factor [Halogeometricum borinquense DSM 11551]
gi|312292583|gb|ADQ67043.1| TATA binding protein of transcription factor TFIID [Halogeometricum
borinquense DSM 11551]
gi|445575111|gb|ELY29590.1| transcription factor [Halogeometricum borinquense DSM 11551]
Length = 186
Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 92/166 (55%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+VA+ + +LDL+ +A A++NP F + R ++PK ALIF SGKIVCTGA
Sbjct: 10 IQNVVASTGIGQELDLEALADDLPGADFNPDNFPGLVYRTQDPKAAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS A ++ + PV + + +QNIV S D+ + L L G
Sbjct: 70 KSIDDVHEALGIIFDKLRGLSIPVDEDPEITVQNIVSSADLGHNLNLNALAIGLGLEDVE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YRM +P V +L+F SGK+VITG K A I
Sbjct: 130 YEPEQFPGLVYRMDEPEVVILLFGSGKIVITGGKQTNDAETAVEEI 175
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIV++ +L L+L +A L + EY P +F + R+ EP+ L+F SGKIV T
Sbjct: 101 VQNIVSSADLGHNLNLNALAIGLGLEDVEYEPEQFPGLVYRMDEPEVVILLFGSGKIVIT 160
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
G K + A+ A + + + +G
Sbjct: 161 GGKQTNDAETAVEEIVKRIDNLGL 184
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
+IQN+V S + + LE L + + P+ FPGL+YR + P LIF SGK+V
Sbjct: 8 IEIQNVVASTGIGQELDLEAL-ADDLPGADFNPDNFPGLVYRTQDPKAAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIY 169
TGAK+ + ++ A I+
Sbjct: 67 TGAKSIDDVHEALGIIF 83
>gi|110669284|ref|YP_659095.1| transcription factor [Haloquadratum walsbyi DSM 16790]
gi|385804848|ref|YP_005841248.1| TATA-binding transcription initiation factor [Haloquadratum walsbyi
C23]
gi|109627031|emb|CAJ53507.1| TATA-binding transcription initiation factor [Haloquadratum walsbyi
DSM 16790]
gi|148508283|gb|ABQ76067.1| TATA-binding transcription initiation factor [uncultured
haloarchaeon]
gi|339730340|emb|CCC41669.1| TATA-binding transcription initiation factor [Haloquadratum walsbyi
C23]
Length = 186
Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 98/171 (57%), Gaps = 2/171 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +LDL+ +A+ A+Y+P +F + R ++PK+ ALIF SGKIVCTGA
Sbjct: 10 IENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQKPKSAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS + + + ++ + PV D +QNIV S D+ + L + G
Sbjct: 70 KSTTDVRESLHIVFDKLRDLRIPVSDNPDITVQNIVTSADLGEDLNLNAIAIGLGLENIE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
YEPE FPGL+YR+ P V L+F SGK+VITG K + A + I L+
Sbjct: 130 YEPEQFPGLVYRLDNPAVVALLFGSGKLVITGGKEPDDAREAVDVILSRLD 180
>gi|449067334|ref|YP_007434416.1| transcription factor [Sulfolobus acidocaldarius N8]
gi|449069604|ref|YP_007436685.1| transcription factor [Sulfolobus acidocaldarius Ron12/I]
gi|449035842|gb|AGE71268.1| transcription factor [Sulfolobus acidocaldarius N8]
gi|449038112|gb|AGE73537.1| transcription factor [Sulfolobus acidocaldarius Ron12/I]
Length = 177
Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 98/162 (60%), Gaps = 2/162 (1%)
Query: 12 INLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAK 71
+ L+ LDL + N EY+P +F + R++ PK T+LIF SGK+V TGAKS +
Sbjct: 1 MTLDQTLDLYAMERSVPNVEYDPDQFPGLIFRLESPKITSLIFKSGKMVVTGAKSTDELI 60
Query: 72 LAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPG 130
A ++ + ++K G + K +IQNIV S ++ + L++ F + YEPE FPG
Sbjct: 61 KAVKRIIKTLKKYGMQLTGKPKIQIQNIVASANLHVIVNLDK-AAFLLENNMYEPEQFPG 119
Query: 131 LIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
LIYRM +P V +LIF SGK+VITGAK ++++ A I+ L
Sbjct: 120 LIYRMDEPRVVLLIFSSGKMVITGAKREDEVHKAVKKIFDKL 161
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQNIVA+ NL ++L K A N Y P +F + R+ EP+ LIFSSGK+V TGA
Sbjct: 85 IQNIVASANLHVIVNLDKAAFLLENNMYEPEQFPGLIYRMDEPRVVLLIFSSGKMVITGA 144
Query: 65 KSESQAKLAARK-YARIVQ 82
K E + A +K + ++V+
Sbjct: 145 KREDEVHKAVKKIFDKLVE 163
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 37/53 (69%)
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
Y+P+ FPGLI+R++ P +T LIF SGK+V+TGAK+ +++ A I L Y
Sbjct: 21 YDPDQFPGLIFRLESPKITSLIFKSGKMVVTGAKSTDELIKAVKRIIKTLKKY 73
>gi|19073311|gb|AAL84756.1|AF469636_1 TATA binding protein D [Halobacterium sp. GN101]
Length = 186
Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 96/169 (56%), Gaps = 6/169 (3%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ L +L L+++A A+YNP F V R+ +P +T LIF SGK VCTGA
Sbjct: 10 IENVVASSTLGAELALEQLAADLPGADYNPEEFPGVIYRLDDPPSTTLIFDSGKAVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN---GFHAMF 120
++ A ++++G + +QNIV S D++ P+ L + G A+
Sbjct: 70 QTVDDVHEALSIVVEDLRELGIDIAADPPVDVQNIVCSADLDQPLNLNAIAIGLGLEAI- 128
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIY 169
YEPE FPGL+YR+ P+V +L+F SGK+VITG + A +++
Sbjct: 129 -EYEPEQFPGLVYRLDDPDVVVLLFGSGKLVITGGSDPDDATVALEDVH 176
>gi|448427036|ref|ZP_21583589.1| transcription factor [Halorubrum terrestre JCM 10247]
gi|445679083|gb|ELZ31564.1| transcription factor [Halorubrum terrestre JCM 10247]
Length = 186
Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 95/170 (55%), Gaps = 1/170 (0%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
++N+VA+ + +LDL+ +A+ A+Y+P +F + R +PK+ ALIF SGKIVCTGA
Sbjct: 11 VENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTTDPKSAALIFRSGKIVCTGA 70
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFSTY 123
S + ++ + P++ + +QNIV S D+ + L + G Y
Sbjct: 71 NSIEAVHESLDIVFDELRALQIPIEDPEITVQNIVTSADLGESLNLNAIAIGLGLEHIEY 130
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
EPE FPGL+YR+ +P V L+F SGKVV+TG AA + I LN
Sbjct: 131 EPEQFPGLVYRLDEPEVVALLFGSGKVVVTGGTTPADAEAAVDVIVEELN 180
>gi|448732580|ref|ZP_21714852.1| transcription factor [Halococcus salifodinae DSM 8989]
gi|445804522|gb|EMA54773.1| transcription factor [Halococcus salifodinae DSM 8989]
Length = 191
Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 94/169 (55%), Gaps = 1/169 (0%)
Query: 6 QNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAK 65
QN+VA+ + ++DL+ +A+ A+++P +F + R + K T LIF SG I CTGA+
Sbjct: 17 QNVVASSGIGQEIDLESVAMDLTGADFDPGQFPGLIYRPDDAKATCLIFRSGAITCTGAQ 76
Query: 66 SESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFSTYE 124
S + + + ++G V+ D +QNIV D+ + L + G YE
Sbjct: 77 SIEEVQETVHTAVGALVELGIDVEAPDVTVQNIVSGADLGETLNLNAIAIGLGLESVEYE 136
Query: 125 PELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
PE FPGL+YR+ P+V L+F SGK+VITGAK ++ AA I LN
Sbjct: 137 PEQFPGLVYRLDDPDVVALLFGSGKMVITGAKIHDEAEAALEEIIRRLN 185
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIV+ +L L+L IA L + EY P +F + R+ +P AL+F SGK+V T
Sbjct: 106 VQNIVSGADLGETLNLNAIAIGLGLESVEYEPEQFPGLVYRLDDPDVVALLFGSGKMVIT 165
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
GAK +A+ A + R + +G
Sbjct: 166 GAKIHDEAEAALEEIIRRLNDLGL 189
>gi|222481033|ref|YP_002567270.1| transcription factor [Halorubrum lacusprofundi ATCC 49239]
gi|222453935|gb|ACM58200.1| TATA-box binding family protein [Halorubrum lacusprofundi ATCC
49239]
Length = 185
Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 97/170 (57%), Gaps = 1/170 (0%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +LDL+ +A+ A+Y+P +F + R +PK+ ALIF SGKIVCTGA
Sbjct: 10 IENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTTDPKSAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFSTY 123
S + ++ + P+ + +QNIV S D+ + L + G Y
Sbjct: 70 NSIDAVHESLAIVFDELRGLQIPIDDPEITVQNIVTSADLGESLNLNAIAIGLGLEHIEY 129
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
EPE FPGL+YR+ +P+V L+F SGK+VITG + + AA + I L+
Sbjct: 130 EPEQFPGLVYRIDEPDVVALLFGSGKLVITGGTSPDDAAAAVDVIVEKLD 179
>gi|332797079|ref|YP_004458579.1| TATA-like box binding protein, TBP [Acidianus hospitalis W1]
gi|332694814|gb|AEE94281.1| archaeal TATA-like box binding protein, TBP [Acidianus hospitalis
W1]
Length = 167
Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 91/146 (62%), Gaps = 2/146 (1%)
Query: 29 NAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGFPV 88
N EY+P +F + R++ PK T+LIF SGK+V TGAKS + A ++ + ++K G +
Sbjct: 7 NVEYDPDQFPGLIFRLESPKVTSLIFKSGKMVVTGAKSTEELIKAVKRIIKTLKKYGIKI 66
Query: 89 QFK-DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLS 147
K +IQNIV S ++ + L++ F + YEPE FPGLI+RM P V +LIF S
Sbjct: 67 TGKPKIQIQNIVASANMHVHVNLDKA-AFLLENNMYEPEQFPGLIFRMDDPRVVLLIFSS 125
Query: 148 GKVVITGAKAREQIYAAFNNIYPVLN 173
GK+VITGAK E++Y A I+ LN
Sbjct: 126 GKMVITGAKREEEVYKAVKKIFDKLN 151
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQNIVA+ N+ ++L K A N Y P +F + R+ +P+ LIFSSGK+V TGA
Sbjct: 74 IQNIVASANMHVHVNLDKAAFLLENNMYEPEQFPGLIFRMDDPRVVLLIFSSGKMVITGA 133
Query: 65 KSESQAKLAARK 76
K E + A +K
Sbjct: 134 KREEEVYKAVKK 145
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 37/53 (69%)
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
Y+P+ FPGLI+R++ P VT LIF SGK+V+TGAK+ E++ A I L Y
Sbjct: 10 YDPDQFPGLIFRLESPKVTSLIFKSGKMVVTGAKSTEELIKAVKRIIKTLKKY 62
>gi|448578919|ref|ZP_21644278.1| transcription factor [Haloferax larsenii JCM 13917]
gi|448589307|ref|ZP_21649466.1| transcription factor [Haloferax elongans ATCC BAA-1513]
gi|445724847|gb|ELZ76474.1| transcription factor [Haloferax larsenii JCM 13917]
gi|445735735|gb|ELZ87283.1| transcription factor [Haloferax elongans ATCC BAA-1513]
Length = 188
Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 97/166 (58%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +LDL+ +A+ A+Y+P +F + R + PK+ ALIF SGKIVCTGA
Sbjct: 10 IENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQNPKSAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS + ++++ PV + +QNIV S D+ + L + G
Sbjct: 70 KSTDDVHESLGIVFDKLRELQIPVDDDPEITVQNIVTSADLGENLNLNAIAIGLGLENIE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ +P+V L+F SGK+VITG K E AA + I
Sbjct: 130 YEPEQFPGLVYRLDEPSVVALLFGSGKLVITGGKKPEDAAAAVDVI 175
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
I+N+V S + + L+ + + Y+PE FPGL+YR + P LIF SGK+V
Sbjct: 8 INIENVVASTGIGQELDLQSV-AMDLEGADYDPEQFPGLVYRTQNPKSAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIY 169
TGAK+ + ++ + ++
Sbjct: 67 TGAKSTDDVHESLGIVF 83
>gi|448488858|ref|ZP_21607457.1| transcription factor [Halorubrum californiensis DSM 19288]
gi|445695479|gb|ELZ47582.1| transcription factor [Halorubrum californiensis DSM 19288]
Length = 186
Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 94/170 (55%), Gaps = 1/170 (0%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
++N+VA+ + +LDL+ +A+ A+Y+P +F + R +PK+ ALIF SGKIVCTGA
Sbjct: 11 VENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTTDPKSAALIFRSGKIVCTGA 70
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFSTY 123
S + ++ + P++ +QNIV S D+ + L + G Y
Sbjct: 71 NSIEAVHESLDIVFAELRALQIPIEDPKITVQNIVTSADLGESLNLNAIAIGLGLEHIEY 130
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
EPE FPGL+YR+ P V L+F SGKVV+TG + AA + I LN
Sbjct: 131 EPEQFPGLVYRLDDPEVVALLFGSGKVVVTGGTTPDDAAAAVDVIVEELN 180
>gi|45357820|ref|NP_987377.1| transcription factor [Methanococcus maripaludis S2]
gi|340623439|ref|YP_004741892.1| transcription factor [Methanococcus maripaludis X1]
gi|56749680|sp|Q6M0L3.1|TBP_METMP RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|45047380|emb|CAF29813.1| TATA-binding protein (TBP) [Methanococcus maripaludis S2]
gi|339903707|gb|AEK19149.1| transcription factor [Methanococcus maripaludis X1]
Length = 181
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 100/175 (57%), Gaps = 5/175 (2%)
Query: 1 MAPVIQ--NIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGK 58
M P I+ N+V + + +DL+ A NAEY P +F + R+ EPK LIF SGK
Sbjct: 1 MEPEIKVVNVVVSTQIGTDIDLEYAADILDNAEYEPEQFPGLVCRLSEPKVALLIFRSGK 60
Query: 59 IVCTGAKSESQAKLAARKYARIVQKIGFP-VQFKDFKIQNIVGSCDVEFPIKLERLNGFH 117
+ CTGA+ + A +A K + +++ G + + K+QN+V + ++ L+ ++
Sbjct: 61 LNCTGARCKEDAVIAINKIVKELKEAGMDLIDNPEVKVQNMVATTELGMEPNLDDISTLE 120
Query: 118 AMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
+ YEPE FPGL+YR+ +P V +LIF SGKVVITG K E Y AF+ I L
Sbjct: 121 C--TEYEPEQFPGLVYRLSEPKVVVLIFGSGKVVITGLKVIEDAYIAFDKISKTL 173
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
+QN+VAT L + +L I+ EY P +F + R+ EPK LIF SGK+V TG
Sbjct: 98 VQNMVATTELGMEPNLDDIS-TLECTEYEPEQFPGLVYRLSEPKVVVLIFGSGKVVITGL 156
Query: 65 KSESQAKLAARKYARIVQKI 84
K A +A K ++ ++++
Sbjct: 157 KVIEDAYIAFDKISKTLKEL 176
>gi|340345517|ref|ZP_08668649.1| TATA-box binding protein [Candidatus Nitrosoarchaeum koreensis MY1]
gi|339520658|gb|EGP94381.1| TATA-box binding protein [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 187
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 109/182 (59%), Gaps = 10/182 (5%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
++N+VA+ ++E K+DL +I + EY+P +F + R++ P+T LIF +GK+VCTGA
Sbjct: 10 VENVVASASVEQKIDLNEITEKFPDTEYHPEQFPGLVFRLQNPRTATLIFRTGKMVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKI-GFPVQFKD---FKIQNIVGSCDVEFPIKLERLNGFHAMF 120
KSE +A + +VQK+ ++ K+ +QNIV + ++ I LE+
Sbjct: 70 KSED---MAIKAVNTVVQKLRKGKIKIKNDAVITVQNIVAAINLGGKIHLEKA-ARTLPR 125
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNV--YVTY 178
S YEPE FPGLI+RM P +L+F SGK+V TGAK +Y + +N++ +L + Y
Sbjct: 126 SMYEPEQFPGLIHRMLDPKTVILLFASGKLVCTGAKKESDVYRSVHNLHSLLEEKNLMIY 185
Query: 179 DQ 180
DQ
Sbjct: 186 DQ 187
>gi|448736860|ref|ZP_21718941.1| transcription factor [Halococcus thailandensis JCM 13552]
gi|445805544|gb|EMA55752.1| transcription factor [Halococcus thailandensis JCM 13552]
Length = 203
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 94/170 (55%), Gaps = 1/170 (0%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
+QN+V + L ++DLK +AL A+++P +F V R + + T LIF SGKI CTGA
Sbjct: 28 VQNVVVSSTLNQEIDLKSVALDLTGADFDPEQFPGVIYRPESAEATCLIFRSGKITCTGA 87
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFSTY 123
S A+ + V+ +G V+ +QNIV D+ + LE + G Y
Sbjct: 88 GSIEGARETVQATVETVRGLGIDVEEPTVTVQNIVSDADLGEELNLEAIAIGLGLEDIEY 147
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
EPE FPGLIYR+ +P+ +L+F +GK VITGA+ ++ A I L+
Sbjct: 148 EPEQFPGLIYRLDEPDTVVLLFGTGKTVITGAETQDDAEEALKTIIDRLS 197
>gi|389861732|ref|YP_006363972.1| transcription factor [Thermogladius cellulolyticus 1633]
gi|388526636|gb|AFK51834.1| transcription factor [Thermogladius cellulolyticus 1633]
Length = 210
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 93/151 (61%), Gaps = 2/151 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVAT+ LE +DL + N + P +F + R+ +PK TALIF SGK+V TG
Sbjct: 28 IENIVATVILEHGIDLDLLESKIPNITFRPDQFPGLIFRLDKPKATALIFRSGKMVVTGT 87
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KS ++ ++ RI+ + G + K +IQNIV S D+ + LER + S Y
Sbjct: 88 KSTNELIEVVKRMIRILARHGIRITGKPRIQIQNIVASGDIHALVNLER-AAYMLEDSMY 146
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITG 154
EPE FPGLI+RM++P V +LIF SGK+VITG
Sbjct: 147 EPEQFPGLIHRMREPRVVLLIFSSGKMVITG 177
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 94 KIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVIT 153
+I+NIV + +E I L+ L T+ P+ FPGLI+R+ KP T LIF SGK+V+T
Sbjct: 27 RIENIVATVILEHGIDLDLLESKIPNI-TFRPDQFPGLIFRLDKPKATALIFRSGKMVVT 85
Query: 154 GAKAREQIYAAFNNIYPVL 172
G K+ ++ + +L
Sbjct: 86 GTKSTNELIEVVKRMIRIL 104
>gi|448475876|ref|ZP_21603231.1| transcription factor [Halorubrum aidingense JCM 13560]
gi|445816094|gb|EMA66003.1| transcription factor [Halorubrum aidingense JCM 13560]
Length = 185
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 94/165 (56%), Gaps = 1/165 (0%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +LDL+ +A+ A+Y+P +F + R +PK+ ALIF SGKIVCTGA
Sbjct: 10 IENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTTDPKSAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFSTY 123
S + ++ + P+ + +QNIV S D+ + L + G Y
Sbjct: 70 SSIDAVHESLAIVFDELRALQIPIDDPEITVQNIVTSADLGESLNLNAIAIGLGLEHIEY 129
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
EPE FPGL+YR+ +P+V L+F SGK+V+TG + AA + I
Sbjct: 130 EPEQFPGLVYRLDEPDVVALLFGSGKLVVTGGTTPDDAAAAVDVI 174
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
I+N+V S + + L+ + + Y+PE FPGL+YR P LIF SGK+V
Sbjct: 8 ITIENVVASTGIGQELDLQSV-AMDLEGADYDPEQFPGLVYRTTDPKSAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIY 169
TGA + + ++ + ++
Sbjct: 67 TGASSIDAVHESLAIVF 83
>gi|432328919|ref|YP_007247063.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Aciduliprofundum sp. MAR08-339]
gi|432135628|gb|AGB04897.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Aciduliprofundum sp. MAR08-339]
Length = 181
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 99/167 (59%), Gaps = 4/167 (2%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVA+ +L KLDL KIAL AEY P +F + R+ EPKT LIF SGK+ CTGA
Sbjct: 6 IENIVASTSLADKLDLSKIALALDGAEYEPEQFPGLIYRLPEPKTAVLIFRSGKVNCTGA 65
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDFKI--QNIVGSCDVEFPIKLERLNGFHAMFST 122
K + + + ++ G V + + KI QNIV D+ + L + + +
Sbjct: 66 KDIEKVEKTIKILVDKLKAAGIEV-YDNPKIVVQNIVAVYDLGVELNLTDIAMSLGLENV 124
Query: 123 -YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+++P V +L+F SGKVV TGAK +E+I A +
Sbjct: 125 EYEPEQFPGLVYRIEEPKVVLLLFGSGKVVCTGAKKKEEIVEAIKKL 171
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Query: 4 VIQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVC 61
V+QNIVA +L +L+L IA L N EY P +F + RI+EPK L+F SGK+VC
Sbjct: 96 VVQNIVAVYDLGVELNLTDIAMSLGLENVEYEPEQFPGLVYRIEEPKVVLLLFGSGKVVC 155
Query: 62 TGAKSESQAKLAARKYARIVQKIGF 86
TGAK + + A +K + ++ +G
Sbjct: 156 TGAKKKEEIVEAIKKLKKELESVGL 180
>gi|257386786|ref|YP_003176559.1| TATA-box binding family protein [Halomicrobium mukohataei DSM
12286]
gi|257169093|gb|ACV46852.1| TATA-box binding family protein [Halomicrobium mukohataei DSM
12286]
Length = 186
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 95/166 (57%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +LDL+ +A+ A+Y+P +F + R ++PK+ ALIF SGKIVCTGA
Sbjct: 10 IENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQDPKSAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS + R ++ + V + +QNIV S D+ + L + G
Sbjct: 70 KSTDDVHQSLRIVFDKLRDLNIQVDDDPEIVVQNIVTSADLGRTLNLNAIAIGLGLENIE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ P+V L+F SGK+VITG K + A + I
Sbjct: 130 YEPEQFPGLVYRLDDPDVVALLFGSGKLVITGGKEPDDAKEAVDKI 175
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 4 VIQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVC 61
V+QNIV + +L L+L IA L N EY P +F + R+ +P AL+F SGK+V
Sbjct: 100 VVQNIVTSADLGRTLNLNAIAIGLGLENIEYEPEQFPGLVYRLDDPDVVALLFGSGKLVI 159
Query: 62 TGAKSESQAKLAARKYARIVQKIGF 86
TG K AK A K ++ +G
Sbjct: 160 TGGKEPDDAKEAVDKIVSRLEDLGL 184
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
I+N+V S + + L+ + + Y+PE FPGL+YR + P LIF SGK+V
Sbjct: 8 INIENVVASTGIGQELDLQSV-AMDLEGADYDPEQFPGLVYRTQDPKSAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIYP---VLNVYVTYD 179
TGAK+ + ++ + ++ LN+ V D
Sbjct: 67 TGAKSTDDVHQSLRIVFDKLRDLNIQVDDD 96
>gi|325959799|ref|YP_004291265.1| TATA-box-binding protein [Methanobacterium sp. AL-21]
gi|325331231|gb|ADZ10293.1| TATA-box-binding protein [Methanobacterium sp. AL-21]
Length = 181
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/160 (44%), Positives = 97/160 (60%), Gaps = 8/160 (5%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
++NIVA+ L LDL ++A EYN +F + ++KEPKT ALIF SGK+VCTGA
Sbjct: 8 VENIVASAALGKSLDLPQVAPALEGVEYNSEQFPGLVYKLKEPKTAALIFGSGKLVCTGA 67
Query: 65 KSESQAK----LAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
KS +K +A K + +I P +F + KIQNIV S ++ + LE +
Sbjct: 68 KSIEDSKKAIHIAVDKMRALDTEI--PHEF-EIKIQNIVASANLGKTLNLESV-ALDLEN 123
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQ 160
+ YEPE FPGL+YR+ P V +L+F SGKVV TGAK+ E
Sbjct: 124 TEYEPEQFPGLVYRLDDPKVVLLLFGSGKVVCTGAKSFED 163
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 46/72 (63%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQNIVA+ NL L+L+ +AL N EY P +F + R+ +PK L+F SGK+VCTGA
Sbjct: 99 IQNIVASANLGKTLNLESVALDLENTEYEPEQFPGLVYRLDDPKVVLLLFGSGKVVCTGA 158
Query: 65 KSESQAKLAARK 76
KS A+L K
Sbjct: 159 KSFEDAQLGVEK 170
>gi|256087298|ref|XP_002579809.1| TATA-binding protein-related [Schistosoma mansoni]
gi|238665296|emb|CAZ36048.1| TATA-binding protein-related [Schistosoma mansoni]
Length = 738
Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 67/174 (38%), Positives = 106/174 (60%), Gaps = 3/174 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I N+V +L+C L LK+IA + N EY + + V MR++ P T A I+SSGKI CTGA
Sbjct: 67 ITNVVVMASLQCHLRLKEIARTSVNVEYKALQ-NHVIMRLRSPYTVATIWSSGKIWCTGA 125
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYE 124
S ++AK+ AR+ AR + K GFP F +++ NI+ +C + F ++LE L M +YE
Sbjct: 126 NSLAKAKIGARRIARRIAKCGFPCHFSKYRVVNIMATCKLPFGVRLEELVKERPMQMSYE 185
Query: 125 PELFPGLIYRMKKPNVTML-IFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVT 177
PEL PGL ++ + T L +F +G++VI G+ + + I + + P+ ++ T
Sbjct: 186 PELAPGLTFKTDINSSTSLKLFSTGRIVIMGS-SLDSIGSLVEELVPIAALHQT 238
>gi|16120311|ref|NP_395899.1| transcription factor [Halobacterium sp. NRC-1]
gi|14423950|sp|Q9HHE9.1|TBPF_HALSA RecName: Full=TATA-box-binding protein F; AltName: Full=Box
A-binding protein F; Short=BAP F; AltName: Full=TATA
sequence-binding protein F; Short=TBP F; AltName:
Full=TATA-box factor F
gi|10584455|gb|AAG21034.1| transcription initiation factor IID [Halobacterium sp. NRC-1]
Length = 186
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 91/153 (59%), Gaps = 2/153 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ +L +L L ++A AEYNP F V R++EPK+ LIF SGK+VCTGA
Sbjct: 10 IENVVASSDLGQELALDQLATDLDGAEYNPEDFPGVVYRLQEPKSATLIFRSGKVVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS A ++++G V K+QNIV S +E + L + G
Sbjct: 70 KSVDAVHDALEIVFDDLRELGIDVDSTPPVKVQNIVSSASLEQSLNLNAIAIGLGLEQIE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGA 155
YEPE FPGL+YR+ P+V +L+F SGK+VITGA
Sbjct: 130 YEPEQFPGLVYRLDDPDVVVLLFGSGKLVITGA 162
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
I+N+V S D+ + L++L + Y PE FPG++YR+++P LIF SGKVV
Sbjct: 8 IHIENVVASSDLGQELALDQL-ATDLDGAEYNPEDFPGVVYRLQEPKSATLIFRSGKVVC 66
Query: 153 TGAKAREQIYAAFNNIYPVL 172
TGAK+ + ++ A ++ L
Sbjct: 67 TGAKSVDAVHDALEIVFDDL 86
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIV++ +LE L+L IA L EY P +F + R+ +P L+F SGK+V T
Sbjct: 101 VQNIVSSASLEQSLNLNAIAIGLGLEQIEYEPEQFPGLVYRLDDPDVVVLLFGSGKLVIT 160
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
GA + A+ A + ++G
Sbjct: 161 GAAESADAQHALAHVNDRLTELGL 184
>gi|76801184|ref|YP_326192.1| transcription factor [Natronomonas pharaonis DSM 2160]
gi|121696850|sp|Q3ITB1.1|TBP_NATPD RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|76557049|emb|CAI48623.1| TATA-binding transcription initiation factor [Natronomonas
pharaonis DSM 2160]
Length = 187
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 96/166 (57%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +LDL+ +A+ A+Y+P +F + R +EPK+ ALIF SGKIVCTGA
Sbjct: 10 IENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQEPKSAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS + R ++ + V + + +QNIV S D+ + L + G
Sbjct: 70 KSTDDVHESLRIVFDKLRDLEIQVDEDPEIVVQNIVTSADLGRNLNLNAIAIGLGLENIE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ P+V L+F SGK+VITG K + A + I
Sbjct: 130 YEPEQFPGLVYRLDDPDVVALLFGSGKLVITGGKEPDDAREAVDKI 175
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 4 VIQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVC 61
V+QNIV + +L L+L IA L N EY P +F + R+ +P AL+F SGK+V
Sbjct: 100 VVQNIVTSADLGRNLNLNAIAIGLGLENIEYEPEQFPGLVYRLDDPDVVALLFGSGKLVI 159
Query: 62 TGAKSESQAKLAARKYARIVQKIGF 86
TG K A+ A K ++++G
Sbjct: 160 TGGKEPDDAREAVDKIVSRLEELGL 184
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
I+N+V S + + L+ + + Y+PE FPGL+YR ++P LIF SGK+V
Sbjct: 8 INIENVVASTGIGQELDLQSV-AMDLEGADYDPEQFPGLVYRTQEPKSAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIYPVL 172
TGAK+ + ++ + ++ L
Sbjct: 67 TGAKSTDDVHESLRIVFDKL 86
>gi|340344813|ref|ZP_08667945.1| TATA-box binding protein [Candidatus Nitrosoarchaeum koreensis MY1]
gi|339519954|gb|EGP93677.1| TATA-box binding protein [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 186
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 99/169 (58%), Gaps = 2/169 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I N+VA+ ++ KLDL I + EY+P +F R+K PKT L+FSSGK+VCTGA
Sbjct: 10 IVNVVASATIDQKLDLVDITKKFPDVEYHPEQFPGAVFRLKNPKTATLLFSSGKMVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KS+ A+ A K I++K ++ IQNIV S ++ + LE+ S Y
Sbjct: 70 KSQELAEDAVSKVVEILRKGKIKIKNDATVTIQNIVSSINLGGRVNLEQ-AARTLPRSMY 128
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPE FPGLI+RM P +LIF SGK+V GAK + I+ + + I+ +L
Sbjct: 129 EPEQFPGLIHRMLDPKTVILIFASGKLVCVGAKLEKDIHRSVHQIHSML 177
>gi|448611222|ref|ZP_21661856.1| transcription factor [Haloferax mucosum ATCC BAA-1512]
gi|445743654|gb|ELZ95135.1| transcription factor [Haloferax mucosum ATCC BAA-1512]
Length = 189
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 99/171 (57%), Gaps = 2/171 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +LDL+ +A+ A+Y+P +F + R ++PK+ ALIF SGKIVCTGA
Sbjct: 10 IENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQDPKSAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS + ++++ PV + +QNIV S D+ + L + G
Sbjct: 70 KSTDGVHESLEIVFDKLRELQIPVDDDPEITVQNIVTSADLGENLNLNAIAIGLGLEHIE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
YEPE FPGL+YR+ +P+V L+F SGK+VITG K + A + I L+
Sbjct: 130 YEPEQFPGLVYRLDEPSVVALLFGSGKLVITGGKKPQDAEDAVDVIMSRLS 180
>gi|389845649|ref|YP_006347888.1| TATA-binding transcription initiation factor [Haloferax
mediterranei ATCC 33500]
gi|448616732|ref|ZP_21665442.1| transcription factor [Haloferax mediterranei ATCC 33500]
gi|388242955|gb|AFK17901.1| TATA-binding transcription initiation factor [Haloferax
mediterranei ATCC 33500]
gi|445751387|gb|EMA02824.1| transcription factor [Haloferax mediterranei ATCC 33500]
Length = 189
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 96/166 (57%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +LDL+ +A+ A+Y+P +F + R + PK+ ALIF SGKIVCTGA
Sbjct: 10 IENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQNPKSAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS + ++ + PV + +QNIV S D+ + L + G
Sbjct: 70 KSTDDVHESLEIVFDKLRDLQIPVDDDPEITVQNIVTSADLGENLNLNAIAIGLGLENIE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ +P+V L+F SGK+VITG K + AA + I
Sbjct: 130 YEPEQFPGLVYRLDEPSVVALLFGSGKLVITGGKKPQDAAAAVDVI 175
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
I+N+V S + + L+ + + Y+PE FPGL+YR + P LIF SGK+V
Sbjct: 8 INIENVVASTGIGQELDLQSV-AMDLEGADYDPEQFPGLVYRTQNPKSAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIY 169
TGAK+ + ++ + ++
Sbjct: 67 TGAKSTDDVHESLEIVF 83
>gi|219851944|ref|YP_002466376.1| transcription factor [Methanosphaerula palustris E1-9c]
gi|219546203|gb|ACL16653.1| TATA-box binding family protein [Methanosphaerula palustris E1-9c]
Length = 186
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVA+ + LDL IA AEY+ RF V +RIK+PK AL+F+SGK+V TGA
Sbjct: 11 IENIVASAKVTDHLDLPAIASQLEGAEYDKKRFPGVVIRIKDPKIAALVFNSGKVVLTGA 70
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS + +++ IG + + +QNIV S D+ I L ++ GF+
Sbjct: 71 KSIDILDRGIALLSDMLRAIGVEIDGTPTYTVQNIVTSADLGSTINLNKIAVGFNLNKIE 130
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAK 156
YEPE FPGL+YR+ P V +L+F SGK++ITG K
Sbjct: 131 YEPEQFPGLVYRLDDPKVVLLLFGSGKMIITGGK 164
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIAL--HARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIV + +L ++L KIA+ + EY P +F + R+ +PK L+F SGK++ T
Sbjct: 102 VQNIVTSADLGSTINLNKIAVGFNLNKIEYEPEQFPGLVYRLDDPKVVLLLFGSGKMIIT 161
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
G K A+ A ++ + +G
Sbjct: 162 GGKHTVDAERAVQRIMSDLTGLGL 185
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 9/69 (13%)
Query: 93 FKIQNIVGSCDV----EFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSG 148
KI+NIV S V + P +L G + Y+ + FPG++ R+K P + L+F SG
Sbjct: 9 LKIENIVASAKVTDHLDLPAIASQLEG-----AEYDKKRFPGVVIRIKDPKIAALVFNSG 63
Query: 149 KVVITGAKA 157
KVV+TGAK+
Sbjct: 64 KVVLTGAKS 72
>gi|146304491|ref|YP_001191807.1| transcription factor [Metallosphaera sedula DSM 5348]
gi|145702741|gb|ABP95883.1| TATA binding protein of transcription factor TFIID [Metallosphaera
sedula DSM 5348]
Length = 176
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 97/161 (60%), Gaps = 2/161 (1%)
Query: 14 LECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLA 73
+E LDL + N EY+P +F + R++ PK T+LIF SGK+V TGAKS + A
Sbjct: 1 MEQTLDLYAMERSVPNVEYDPDQFPGLIFRLESPKVTSLIFKSGKMVVTGAKSTEELIKA 60
Query: 74 ARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLI 132
++ + +++ G + K +IQNIV S ++ + L++ F + YEPE FPGLI
Sbjct: 61 VKRIIKSLRRYGIRIGGKPKIQIQNIVASANMHVHVNLDK-AAFLLENNMYEPEQFPGLI 119
Query: 133 YRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
+RM +P V +LIF SGK+VITGAK +++Y A I+ L
Sbjct: 120 FRMDEPRVVLLIFSSGKMVITGAKREDEVYKAVKKIFDKLE 160
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 43/72 (59%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQNIVA+ N+ ++L K A N Y P +F + R+ EP+ LIFSSGK+V TGA
Sbjct: 83 IQNIVASANMHVHVNLDKAAFLLENNMYEPEQFPGLIFRMDEPRVVLLIFSSGKMVITGA 142
Query: 65 KSESQAKLAARK 76
K E + A +K
Sbjct: 143 KREDEVYKAVKK 154
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 37/53 (69%)
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
Y+P+ FPGLI+R++ P VT LIF SGK+V+TGAK+ E++ A I L Y
Sbjct: 19 YDPDQFPGLIFRLESPKVTSLIFKSGKMVVTGAKSTEELIKAVKRIIKSLRRY 71
>gi|289596646|ref|YP_003483342.1| TATA-box binding family protein [Aciduliprofundum boonei T469]
gi|289534433|gb|ADD08780.1| TATA-box binding family protein [Aciduliprofundum boonei T469]
Length = 181
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 98/167 (58%), Gaps = 4/167 (2%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVA+ +L KLDL KIAL AEY P +F + R+ EPKT LIF SGK+ CTGA
Sbjct: 6 IENIVASTSLADKLDLSKIALALDGAEYEPEQFPGLIYRLPEPKTAVLIFRSGKVNCTGA 65
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDFKI--QNIVGSCDVEFPIKLERLNGFHAMFST 122
K + + + ++ G V + + KI QNIV D+ + L + + +
Sbjct: 66 KDIERVEKTIKILVDKLKAAGIEV-YDNPKIVVQNIVAVYDLGVELNLTDIAMSLGLENV 124
Query: 123 -YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ +P V +L+F SGKVV TGAK +E+I A +
Sbjct: 125 EYEPEQFPGLVYRIDEPKVVLLLFGSGKVVCTGAKKKEEIVEAIKKL 171
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Query: 4 VIQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVC 61
V+QNIVA +L +L+L IA L N EY P +F + RI EPK L+F SGK+VC
Sbjct: 96 VVQNIVAVYDLGVELNLTDIAMSLGLENVEYEPEQFPGLVYRIDEPKVVLLLFGSGKVVC 155
Query: 62 TGAKSESQAKLAARKYARIVQKIGF 86
TGAK + + A +K + ++ +G
Sbjct: 156 TGAKKKEEIVEAIKKLKKELENVGL 180
>gi|150400012|ref|YP_001323779.1| transcription factor [Methanococcus vannielii SB]
gi|166227822|sp|A6URP5.1|TBP_METVS RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|150012715|gb|ABR55167.1| TATA-box binding [Methanococcus vannielii SB]
Length = 181
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 100/175 (57%), Gaps = 5/175 (2%)
Query: 1 MAPVIQ--NIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGK 58
M P I+ N+V + + +DL+ A NAEY P +F + R+ +PK LIF SGK
Sbjct: 1 MEPEIKIVNVVVSTQIGTDIDLEYAADILDNAEYEPEQFPGLVCRLSDPKVALLIFRSGK 60
Query: 59 IVCTGAKSESQAKLAARKYARIVQKIGFP-VQFKDFKIQNIVGSCDVEFPIKLERLNGFH 117
+ CTGAKS+ A++A +K + +++ G + +QN+V + ++ L+ ++
Sbjct: 61 LNCTGAKSKEDAEIAIKKIIKELKEAGMEIIDNPVVSVQNMVATTELGMEPNLDDISTLE 120
Query: 118 AMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
+ YEPE FPGL+YR+ P V +LIF SGKVVITG K E Y AF+ I L
Sbjct: 121 C--TEYEPEQFPGLVYRLSDPKVVVLIFGSGKVVITGLKVIEDAYIAFDKISATL 173
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
+QN+VAT L + +L I+ EY P +F + R+ +PK LIF SGK+V TG
Sbjct: 98 VQNMVATTELGMEPNLDDIS-TLECTEYEPEQFPGLVYRLSDPKVVVLIFGSGKVVITGL 156
Query: 65 KSESQAKLAARKYARIVQKI 84
K A +A K + ++++
Sbjct: 157 KVIEDAYIAFDKISATLKEL 176
>gi|315231074|ref|YP_004071510.1| TATA-box binding protein [Thermococcus barophilus MP]
gi|315184102|gb|ADT84287.1| TATA-box binding protein [Thermococcus barophilus MP]
Length = 190
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 98/172 (56%), Gaps = 2/172 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVA+++L +LDL+K+ N++YNP F + R EPK L+FSSGK+V TGA
Sbjct: 11 IENIVASVDLFTQLDLEKVIEICPNSKYNPEEFPGIICRFDEPKVALLVFSSGKLVVTGA 70
Query: 65 KSESQAKLAARKYARIVQKIGFPVQ-FKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KS + A K +++ KIG Q IQN+V S D+ L+ + Y
Sbjct: 71 KSVEDIERAVSKLVQMLSKIGTKFQRAPQIDIQNMVFSGDIGMEFNLDAV-ALVLPNCEY 129
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
EPE FPG+IYR+K+P +L+F SGK+V +GAK+ + A + L Y
Sbjct: 130 EPEQFPGVIYRVKEPRAVILLFSSGKIVCSGAKSEHDAWEAVRKLLRELEKY 181
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 56/89 (62%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+V + ++ + +L +AL N EY P +F V R+KEP+ L+FSSGKIVC+GA
Sbjct: 102 IQNMVFSGDIGMEFNLDAVALVLPNCEYEPEQFPGVIYRVKEPRAVILLFSSGKIVCSGA 161
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDF 93
KSE A A RK R ++K G + ++F
Sbjct: 162 KSEHDAWEAVRKLLRELEKYGLIEEEEEF 190
>gi|254167829|ref|ZP_04874678.1| Transcription factor TFIID (or TATA-binding protein, TBP)
[Aciduliprofundum boonei T469]
gi|254167914|ref|ZP_04874763.1| Transcription factor TFIID (or TATA-binding protein, TBP)
[Aciduliprofundum boonei T469]
gi|197623120|gb|EDY35686.1| Transcription factor TFIID (or TATA-binding protein, TBP)
[Aciduliprofundum boonei T469]
gi|197623205|gb|EDY35771.1| Transcription factor TFIID (or TATA-binding protein, TBP)
[Aciduliprofundum boonei T469]
Length = 185
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 98/167 (58%), Gaps = 4/167 (2%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVA+ +L KLDL KIAL AEY P +F + R+ EPKT LIF SGK+ CTGA
Sbjct: 10 IENIVASTSLADKLDLSKIALALDGAEYEPEQFPGLIYRLPEPKTAVLIFRSGKVNCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDFKI--QNIVGSCDVEFPIKLERLNGFHAMFST 122
K + + + ++ G V + + KI QNIV D+ + L + + +
Sbjct: 70 KDIERVEKTIKILVDKLKAAGIEV-YDNPKIVVQNIVAVYDLGVELNLTDIAMSLGLENV 128
Query: 123 -YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ +P V +L+F SGKVV TGAK +E+I A +
Sbjct: 129 EYEPEQFPGLVYRIDEPKVVLLLFGSGKVVCTGAKKKEEIVEAIKKL 175
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Query: 4 VIQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVC 61
V+QNIVA +L +L+L IA L N EY P +F + RI EPK L+F SGK+VC
Sbjct: 100 VVQNIVAVYDLGVELNLTDIAMSLGLENVEYEPEQFPGLVYRIDEPKVVLLLFGSGKVVC 159
Query: 62 TGAKSESQAKLAARKYARIVQKIGF 86
TGAK + + A +K + ++ +G
Sbjct: 160 TGAKKKEEIVEAIKKLKKELENVGL 184
>gi|452205985|ref|YP_007486107.1| TATA-binding transcription initiation factor [Natronomonas
moolapensis 8.8.11]
gi|452082085|emb|CCQ35336.1| TATA-binding transcription initiation factor [Natronomonas
moolapensis 8.8.11]
Length = 187
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 96/166 (57%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +LDL+ +A+ A+Y+P +F + R +EPK+ ALIF SGKIVCTGA
Sbjct: 10 IENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQEPKSAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS + R ++ + V + + +QNIV S D+ + L + G
Sbjct: 70 KSTDDVHESLRIVFDKLRDLEIQVDEDPEIVVQNIVTSADLGRNLNLNAIAIGLGLENIE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ P+V L+F SGK+VITG K + A + I
Sbjct: 130 YEPEQFPGLVYRLDDPDVVALLFGSGKLVITGGKEPDDAKKAVDKI 175
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 4 VIQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVC 61
V+QNIV + +L L+L IA L N EY P +F + R+ +P AL+F SGK+V
Sbjct: 100 VVQNIVTSADLGRNLNLNAIAIGLGLENIEYEPEQFPGLVYRLDDPDVVALLFGSGKLVI 159
Query: 62 TGAKSESQAKLAARKYARIVQKIGF 86
TG K AK A K ++++G
Sbjct: 160 TGGKEPDDAKKAVDKIVSRLEELGL 184
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
I+N+V S + + L+ + + Y+PE FPGL+YR ++P LIF SGK+V
Sbjct: 8 INIENVVASTGIGQELDLQSV-AMDLEGADYDPEQFPGLVYRTQEPKSAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIYPVL 172
TGAK+ + ++ + ++ L
Sbjct: 67 TGAKSTDDVHESLRIVFDKL 86
>gi|407462989|ref|YP_006774306.1| TATA-box binding family protein [Candidatus Nitrosopumilus
koreensis AR1]
gi|407046611|gb|AFS81364.1| TATA-box binding family protein [Candidatus Nitrosopumilus
koreensis AR1]
Length = 192
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 98/169 (57%), Gaps = 2/169 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I N+VA+ +E KLDL I + EY+P +F R++EPKT L+F SG +VCTGA
Sbjct: 10 IVNVVASATIEQKLDLVDITKKFPHVEYHPEQFPGAVFRLQEPKTATLLFGSGNMVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KSE A A R ++K ++ + IQNIV S ++ + LE+ S Y
Sbjct: 70 KSEEMAIQAVNTVVRKLRKGRIKIKKEPKVTIQNIVSSINLGGKVNLEQ-AARTLPRSMY 128
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPE FPGLI+RM P +LIF SGK+V GAK ++I+ + N I+ +L
Sbjct: 129 EPEQFPGLIHRMLDPKTVILIFASGKLVCVGAKLEKEIHRSVNQIHSLL 177
>gi|342306417|dbj|BAK54506.1| TATA box-binding protein [Sulfolobus tokodaii str. 7]
Length = 175
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 97/160 (60%), Gaps = 2/160 (1%)
Query: 14 LECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLA 73
++ LDL + N EY+P +F + R++ PK T+LIF SGK+V TGAKS + A
Sbjct: 1 MDQNLDLYAMERSVPNVEYDPDQFPGLIFRLEAPKVTSLIFKSGKMVVTGAKSTDELIKA 60
Query: 74 ARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLI 132
++ + +++ G + K +IQNIV S ++ + L++ F + YEPE FPGLI
Sbjct: 61 VKRIIKTLKRYGMNLTGKPKIQIQNIVASANLHVIVNLDK-AAFLLENNMYEPEQFPGLI 119
Query: 133 YRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YRM+ P V +LIF SGK+VITGAK E+++ A I+ L
Sbjct: 120 YRMEDPRVVLLIFSSGKMVITGAKREEEVHKAVKKIFDKL 159
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQNIVA+ NL ++L K A N Y P +F + R+++P+ LIFSSGK+V TGA
Sbjct: 83 IQNIVASANLHVIVNLDKAAFLLENNMYEPEQFPGLIYRMEDPRVVLLIFSSGKMVITGA 142
Query: 65 KSESQAKLAARK-YARIVQ 82
K E + A +K + ++V+
Sbjct: 143 KREEEVHKAVKKIFDKLVE 161
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 37/53 (69%)
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
Y+P+ FPGLI+R++ P VT LIF SGK+V+TGAK+ +++ A I L Y
Sbjct: 19 YDPDQFPGLIFRLEAPKVTSLIFKSGKMVVTGAKSTDELIKAVKRIIKTLKRY 71
>gi|452207285|ref|YP_007487407.1| TATA-binding transcription initiation factor [Natronomonas
moolapensis 8.8.11]
gi|452083385|emb|CCQ36676.1| TATA-binding transcription initiation factor [Natronomonas
moolapensis 8.8.11]
Length = 187
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 94/166 (56%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ ++ +L L+++A+ +EYNP F + RI+EP+ LIF SGKIVCTGA
Sbjct: 10 IENVVASTDIGQELALERLAMDLSGSEYNPDTFPGLIYRIQEPEAANLIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
+ + + ++ +G V + +QNIV S D+ + L + GF
Sbjct: 70 NTVDDVHSSLQTVCETLRDLGIDVIEAPTITVQNIVFSADLRAQLNLNAIAIGFGLEDVE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ P+V L+F SGKVVITG K + A I
Sbjct: 130 YEPEQFPGLVYRLDTPDVVTLLFSSGKVVITGTKTPDAAEEALEKI 175
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 91 KDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKV 150
K I+N+V S D+ + LERL S Y P+ FPGLIYR+++P LIF SGK+
Sbjct: 6 KTIDIENVVASTDIGQELALERL-AMDLSGSEYNPDTFPGLIYRIQEPEAANLIFRSGKI 64
Query: 151 VITGAKAREQIYAAFNNIYPVL 172
V TGA + ++++ + L
Sbjct: 65 VCTGANTVDDVHSSLQTVCETL 86
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 2 APVI--QNIVATINLECKLDLKKIALH--ARNAEYNPSRFSAVTMRIKEPKTTALIFSSG 57
AP I QNIV + +L +L+L IA+ + EY P +F + R+ P L+FSSG
Sbjct: 96 APTITVQNIVFSADLRAQLNLNAIAIGFGLEDVEYEPEQFPGLVYRLDTPDVVTLLFSSG 155
Query: 58 KIVCTGAKSESQAKLAARKYARIVQKIGF 86
K+V TG K+ A+ A K + + ++G
Sbjct: 156 KVVITGTKTPDAAEEALEKISGKLSELGL 184
>gi|435850312|ref|YP_007311898.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Methanomethylovorans hollandica DSM 15978]
gi|433660942|gb|AGB48368.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Methanomethylovorans hollandica DSM 15978]
Length = 183
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 91/157 (57%), Gaps = 2/157 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ L + DL KI AEYN +F + R+ EPK L+F+SGK+VCTGA
Sbjct: 8 IENVVASTKLADEFDLTKIEAEFEGAEYNKQKFPGLVYRVSEPKAAFLVFTSGKVVCTGA 67
Query: 65 KSESQAKLAARKYARIVQKIGF-PVQFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
K+ + A+ + +IG ++ + +QNIV S D+ + L + G
Sbjct: 68 KNVADVHTVISNMAKKLNEIGIKTIKEPEITVQNIVASADLHAVLNLNAIAIGLGLENIE 127
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKARE 159
YEPE FPGL+YR+ KP V +LIF SGK+V+TG K E
Sbjct: 128 YEPEQFPGLVYRIDKPKVVVLIFSSGKLVVTGGKTPE 164
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 92 DFKIQNIVGSCDVEFPIKLERLNGFHAMF--STYEPELFPGLIYRMKKPNVTMLIFLSGK 149
+ KI+N+V S + L ++ A F + Y + FPGL+YR+ +P L+F SGK
Sbjct: 5 NIKIENVVASTKLADEFDLTKI---EAEFEGAEYNKQKFPGLVYRVSEPKAAFLVFTSGK 61
Query: 150 VVITGAKAREQIYAAFNNIYPVLN 173
VV TGAK ++ +N+ LN
Sbjct: 62 VVCTGAKNVADVHTVISNMAKKLN 85
>gi|154150459|ref|YP_001404077.1| transcription factor [Methanoregula boonei 6A8]
gi|153999011|gb|ABS55434.1| TATA-box binding [Methanoregula boonei 6A8]
Length = 186
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 94/158 (59%), Gaps = 2/158 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVA+ + LDL +A ++AEYN RF V +R+++PK AL+F SGK+V TGA
Sbjct: 11 IENIVASAKVTDYLDLPALASKIKDAEYNKKRFPGVVLRMQDPKIAALVFGSGKVVLTGA 70
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS ++ + + K +KIQNIV S D+ I L ++ GF+
Sbjct: 71 KSVDSLSKGLTILGNQLRSLDIDIPKKLTYKIQNIVTSADLATAINLNKIAVGFNLDRIE 130
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQ 160
YEPE FPGL+YR++ P V +L+F SGK++ITG K E
Sbjct: 131 YEPEQFPGLVYRLENPKVVVLLFGSGKLIITGGKEPED 168
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIAL--HARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
IQNIV + +L ++L KIA+ + EY P +F + R++ PK L+F SGK++ T
Sbjct: 102 IQNIVTSADLATAINLNKIAVGFNLDRIEYEPEQFPGLVYRLENPKVVVLLFGSGKLIIT 161
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
G K AK A K ++ +G
Sbjct: 162 GGKEPEDAKKAVVKILSDLRSLGL 185
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
KI+NIV S V + L L + Y + FPG++ RM+ P + L+F SGKVV+
Sbjct: 9 LKIENIVASAKVTDYLDLPAL-ASKIKDAEYNKKRFPGVVLRMQDPKIAALVFGSGKVVL 67
Query: 153 TGAKAREQI 161
TGAK+ + +
Sbjct: 68 TGAKSVDSL 76
>gi|257052326|ref|YP_003130159.1| transcription factor [Halorhabdus utahensis DSM 12940]
gi|256691089|gb|ACV11426.1| TATA-box binding family protein [Halorhabdus utahensis DSM 12940]
Length = 186
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 96/166 (57%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +LDL+ +A+ A+Y+P +F + R +EPK+ ALIF SGKIVCTGA
Sbjct: 10 IENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQEPKSAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS + R ++ + V + + +QNIV S D+ + L + G
Sbjct: 70 KSTDDVHESLRIVFGKLRDLEIQVDEDPEIVVQNIVTSADLGRNLNLNAIAIGLGLENIE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ P+V L+F SGK+VITG K + A + I
Sbjct: 130 YEPEQFPGLVYRLDDPDVVALLFGSGKLVITGGKEPDDAKKAVDKI 175
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 4 VIQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVC 61
V+QNIV + +L L+L IA L N EY P +F + R+ +P AL+F SGK+V
Sbjct: 100 VVQNIVTSADLGRNLNLNAIAIGLGLENIEYEPEQFPGLVYRLDDPDVVALLFGSGKLVI 159
Query: 62 TGAKSESQAKLAARKYARIVQKIGF 86
TG K AK A K ++++G
Sbjct: 160 TGGKEPDDAKKAVDKIVSRLEELGL 184
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
I+N+V S + + L+ + + Y+PE FPGL+YR ++P LIF SGK+V
Sbjct: 8 INIENVVASTGIGQELDLQSV-AMDLEGADYDPEQFPGLVYRTQEPKSAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIY 169
TGAK+ + ++ + ++
Sbjct: 67 TGAKSTDDVHESLRIVF 83
>gi|333986797|ref|YP_004519404.1| TATA-box-binding protein [Methanobacterium sp. SWAN-1]
gi|333824941|gb|AEG17603.1| TATA-box-binding protein [Methanobacterium sp. SWAN-1]
Length = 184
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/160 (45%), Positives = 99/160 (61%), Gaps = 8/160 (5%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
++NIVA+ L L+L K+A EYN +F + ++KEPKT ALIF SGK+VCTGA
Sbjct: 11 VENIVASATLGKSLELPKVAPALEGVEYNVEQFPGLVYKLKEPKTAALIFGSGKLVCTGA 70
Query: 65 KS-ESQAK---LAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
KS E+ K +A K + I P +F + KIQNIV S ++ + LE +
Sbjct: 71 KSIENSIKAIHIAVDKMRSLDPDI--PHEF-EIKIQNIVASANLMSTLNLEAV-AMDLEN 126
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQ 160
+ YEPE FPGL+YR+ +P V +L+F SGKVV TGAK++E
Sbjct: 127 TEYEPEQFPGLVYRLGEPKVVLLLFGSGKVVCTGAKSKED 166
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 47/72 (65%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQNIVA+ NL L+L+ +A+ N EY P +F + R+ EPK L+F SGK+VCTGA
Sbjct: 102 IQNIVASANLMSTLNLEAVAMDLENTEYEPEQFPGLVYRLGEPKVVLLLFGSGKVVCTGA 161
Query: 65 KSESQAKLAARK 76
KS+ A+L K
Sbjct: 162 KSKEDAQLGVEK 173
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 93 FKIQNIVGSC----DVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSG 148
K++NIV S +E P L G Y E FPGL+Y++K+P LIF SG
Sbjct: 9 IKVENIVASATLGKSLELPKVAPALEGVE-----YNVEQFPGLVYKLKEPKTAALIFGSG 63
Query: 149 KVVITGAKAREQIYAAFN 166
K+V TGAK+ E A +
Sbjct: 64 KLVCTGAKSIENSIKAIH 81
>gi|329766561|ref|ZP_08258104.1| TATA-box binding family protein [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|393796800|ref|ZP_10380164.1| TATA-box binding family protein [Candidatus Nitrosoarchaeum limnia
BG20]
gi|329136816|gb|EGG41109.1| TATA-box binding family protein [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 187
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 109/182 (59%), Gaps = 10/182 (5%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
++N+VA+ +++ K+DL +I + EY+P +F + R++ P+T LIF +GK+VCTGA
Sbjct: 10 VENVVASASVDQKIDLNEITEKFPDTEYHPEQFPGLVFRLQNPRTATLIFRTGKMVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKI-GFPVQFKD---FKIQNIVGSCDVEFPIKLERLNGFHAMF 120
KSE +A + +VQK+ ++ K+ +QNIV + ++ I LE+
Sbjct: 70 KSED---MAIKAVNTVVQKLRKGKIKIKNDAVITVQNIVAAINLGGKIHLEKA-ARTLPR 125
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNV--YVTY 178
S YEPE FPGLI+RM P +L+F SGK+V TGAK +Y + +N++ +L + Y
Sbjct: 126 SMYEPEQFPGLIHRMLDPKTVILLFASGKLVCTGAKKESDVYRSVHNLHSLLEEKNLMIY 185
Query: 179 DQ 180
DQ
Sbjct: 186 DQ 187
>gi|407465173|ref|YP_006776055.1| 2-alkenal reductase [Candidatus Nitrosopumilus sp. AR2]
gi|407048361|gb|AFS83113.1| 2-alkenal reductase [Candidatus Nitrosopumilus sp. AR2]
Length = 186
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 98/170 (57%), Gaps = 2/170 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I N+VA+ +E KLDL I EY+P +F R+K PKT L+F SGK+VCTGA
Sbjct: 10 IVNVVASATIEQKLDLVDITKKFPAVEYHPEQFPGAVFRLKNPKTATLLFGSGKMVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDF-KIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KS+ A+ A + +I++K ++ IQNIV S ++ + LE+ S Y
Sbjct: 70 KSQELAETAVFEVVKILRKGKIKIKNDPIVSIQNIVSSINLGGKVNLEQ-AARTLPRSMY 128
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
EPE FPGLI+RM P +LIF SGK+V GAK + ++ + N I+ +L
Sbjct: 129 EPEQFPGLIHRMLDPKTVILIFASGKLVCVGAKLEKDVHRSVNQIHALLE 178
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQNIV++INL K++L++ A + Y P +F + R+ +PKT LIF+SGK+VC GA
Sbjct: 101 IQNIVSSINLGGKVNLEQAARTLPRSMYEPEQFPGLIHRMLDPKTVILIFASGKLVCVGA 160
Query: 65 KSESQAKLAARKYARIVQKIGFPV 88
K E + + ++++ G V
Sbjct: 161 KLEKDVHRSVNQIHALLEEKGLMV 184
>gi|119719211|ref|YP_919706.1| TATA-box binding [Thermofilum pendens Hrk 5]
gi|119524331|gb|ABL77703.1| TATA binding protein of transcription factor TFIID [Thermofilum
pendens Hrk 5]
Length = 142
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/132 (46%), Positives = 87/132 (65%), Gaps = 2/132 (1%)
Query: 42 MRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGFPVQFKD-FKIQNIVG 100
+R+ PKT LIFSSGK+VCTGAKSE++ + A + ++++ G ++ + ++QNIV
Sbjct: 2 LRLTRPKTATLIFSSGKMVCTGAKSEAEVQKAVKSIIKLLKAHGIDIKNEPVIEVQNIVA 61
Query: 101 SCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQ 160
S +++ + LER F S YEPE FPGLIYRM+ P V +LIF SGKVV TGAK E+
Sbjct: 62 SANLKASVDLER-AAFLLENSMYEPEQFPGLIYRMQDPKVVLLIFSSGKVVCTGAKKEEE 120
Query: 161 IYAAFNNIYPVL 172
+ A IY +L
Sbjct: 121 VKRAVEKIYNIL 132
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 57/89 (64%), Gaps = 2/89 (2%)
Query: 3 PVI--QNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
PVI QNIVA+ NL+ +DL++ A N+ Y P +F + R+++PK LIFSSGK+V
Sbjct: 52 PVIEVQNIVASANLKASVDLERAAFLLENSMYEPEQFPGLIYRMQDPKVVLLIFSSGKVV 111
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQ 89
CTGAK E + K A K I+++ G V+
Sbjct: 112 CTGAKKEEEVKRAVEKIYNILKEQGVLVE 140
Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 132 IYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
+ R+ +P LIF SGK+V TGAK+ ++ A +I +L +
Sbjct: 1 MLRLTRPKTATLIFSSGKMVCTGAKSEAEVQKAVKSIIKLLKAH 44
>gi|15791061|ref|NP_280885.1| transcription factor [Halobacterium sp. NRC-1]
gi|169236811|ref|YP_001690011.1| transcription factor [Halobacterium salinarum R1]
gi|14423951|sp|Q9HN56.1|TBPE_HALSA RecName: Full=TATA-box-binding protein E; AltName: Full=Box
A-binding protein E; Short=BAP E; AltName: Full=TATA
sequence-binding protein E; Short=TBP E; AltName:
Full=TATA-box factor E
gi|10581658|gb|AAG20365.1| transcription initiation factor IID [Halobacterium sp. NRC-1]
gi|167727877|emb|CAP14665.1| TATA-binding transcription initiation factor [Halobacterium
salinarum R1]
Length = 186
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 96/166 (57%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +LDL+ +A+ A+Y+P +F + R ++PK+ ALIF SGKIVCTGA
Sbjct: 10 IENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQDPKSAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS + R ++++ V+ + +QNIV S D+ + L + G
Sbjct: 70 KSTDDVHESLRIVFDKLRELSIKVEDDPEIVVQNIVTSADLGRQLNLNAIAIGLGLENIE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ P V L+F SGK+VITG K + A + I
Sbjct: 130 YEPEQFPGLVYRLDDPEVVALLFGSGKLVITGGKEPKDAEHAVDKI 175
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 4 VIQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVC 61
V+QNIV + +L +L+L IA L N EY P +F + R+ +P+ AL+F SGK+V
Sbjct: 100 VVQNIVTSADLGRQLNLNAIAIGLGLENIEYEPEQFPGLVYRLDDPEVVALLFGSGKLVI 159
Query: 62 TGAKSESQAKLAARKYARIVQKIGF 86
TG K A+ A K ++++G
Sbjct: 160 TGGKEPKDAEHAVDKITSRLEELGL 184
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
I+N+V S + + L+ + + Y+PE FPGL+YR + P LIF SGK+V
Sbjct: 8 INIENVVASTGIGQELDLQSV-AMDLEGADYDPEQFPGLVYRTQDPKSAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIYPVL 172
TGAK+ + ++ + ++ L
Sbjct: 67 TGAKSTDDVHESLRIVFDKL 86
>gi|337284406|ref|YP_004623880.1| transcription factor [Pyrococcus yayanosii CH1]
gi|334900340|gb|AEH24608.1| transcription factor [Pyrococcus yayanosii CH1]
Length = 191
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 101/178 (56%), Gaps = 6/178 (3%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVA+++L +LDL+K+ N++YNP F + R +PK LIFSSGK+V TGA
Sbjct: 11 IENIVASVDLFAQLDLEKVIEICPNSKYNPEEFPGIICRFDDPKVALLIFSSGKLVVTGA 70
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKD---FKIQNIVGSCDVEFPIKLERLNGFHAMFS 121
KS + A K ++++ IG V FK IQN+V S D+ L+ +
Sbjct: 71 KSVEDIERAVGKLVQMLKGIG--VSFKRAPLIDIQNMVFSGDIGREFNLDTV-ALSLPNC 127
Query: 122 TYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYD 179
YEPE FPG+IYR+K+P +L+F SGK+V +GAK+ + A + L Y D
Sbjct: 128 EYEPEQFPGVIYRVKEPRAVILLFSSGKIVCSGAKSEHDAWEAVRKLLRELEKYGLLD 185
>gi|212224460|ref|YP_002307696.1| transcription factor [Thermococcus onnurineus NA1]
gi|226703563|sp|B6YXI6.1|TBP_THEON RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|212009417|gb|ACJ16799.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Thermococcus onnurineus NA1]
Length = 192
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 100/172 (58%), Gaps = 2/172 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVA+++L +L+L+K+ N++YNP F + R +EPK LIFSSGK+V TGA
Sbjct: 11 IENIVASVDLFTQLNLEKVIEICPNSKYNPEEFPGIICRFEEPKVALLIFSSGKLVVTGA 70
Query: 65 KSESQAKLAARKYARIVQKIGFPVQ-FKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KS + A K +++++IG Q IQN+V S D+ L+ + Y
Sbjct: 71 KSVEDIERAVNKLIQMLKRIGAKFQRAPQIDIQNMVFSGDIGMEFNLDAV-ALSLPNCEY 129
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
EPE FPG+IYR+K+P +L+F SGK+V +GAK+ + A + L Y
Sbjct: 130 EPEQFPGVIYRVKEPRAVILLFSSGKIVCSGAKSEHDAWEAVRKLLRELEKY 181
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 52/82 (63%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+V + ++ + +L +AL N EY P +F V R+KEP+ L+FSSGKIVC+GA
Sbjct: 102 IQNMVFSGDIGMEFNLDAVALSLPNCEYEPEQFPGVIYRVKEPRAVILLFSSGKIVCSGA 161
Query: 65 KSESQAKLAARKYARIVQKIGF 86
KSE A A RK R ++K G
Sbjct: 162 KSEHDAWEAVRKLLRELEKYGL 183
>gi|48477578|ref|YP_023284.1| transcription factor [Picrophilus torridus DSM 9790]
gi|56749679|sp|Q6L1R1.1|TBP_PICTO RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|48430226|gb|AAT43091.1| TATA-box binding protein [Picrophilus torridus DSM 9790]
Length = 184
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 94/162 (58%), Gaps = 2/162 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVA+ +L LDL KIAL +EY P +F + R++EPKT LIF SGK+ CTGA
Sbjct: 9 IENIVASTSLAEHLDLSKIALALEGSEYEPEQFPGLIYRLQEPKTAVLIFRSGKVNCTGA 68
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST- 122
K+ K ++K V D +QNIV D+E + L + + +
Sbjct: 69 KNLDDVKKTIDIIIDKLKKADIEVYDNPDIIVQNIVAVYDLESNLNLTDIAMSLGLENVE 128
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAA 164
YEPE FPGL+YR+++P V +L+F SGKVV TGAK +I A
Sbjct: 129 YEPEQFPGLVYRVEEPKVVLLLFGSGKVVCTGAKEENEIEQA 170
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 4 VIQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVC 61
++QNIVA +LE L+L IA L N EY P +F + R++EPK L+F SGK+VC
Sbjct: 99 IVQNIVAVYDLESNLNLTDIAMSLGLENVEYEPEQFPGLVYRVEEPKVVLLLFGSGKVVC 158
Query: 62 TGAKSESQAKLAARKYARIVQKIGF 86
TGAK E++ + A K + +QK+G
Sbjct: 159 TGAKEENEIEQAVIKVKKDLQKVGL 183
>gi|161529027|ref|YP_001582853.1| TATA-box binding family protein [Nitrosopumilus maritimus SCM1]
gi|160340328|gb|ABX13415.1| TATA-box binding family protein [Nitrosopumilus maritimus SCM1]
Length = 187
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 105/172 (61%), Gaps = 8/172 (4%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
++N+VA+ +++ K+DL +I + EY+P +F + R+ P+T LIF +GK+VCTGA
Sbjct: 10 VENVVASASVDQKIDLNEITEKFPDTEYHPEQFPGLVFRLSTPRTATLIFRTGKMVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKI-GFPVQFKD---FKIQNIVGSCDVEFPIKLERLNGFHAMF 120
KSE ++A + +VQK+ ++ K+ +QNIV + ++ I LE+
Sbjct: 70 KSE---EMAIKAVNTVVQKLRKGKIKIKNDAVITVQNIVAAINLGGKIHLEKA-ARTLPR 125
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
S YEPE FPGLI+RM P +L+F SGK+V TGAK +Y + +N++ VL
Sbjct: 126 SMYEPEQFPGLIHRMLDPKTVILLFASGKLVCTGAKKESDVYRSVHNLHSVL 177
>gi|448349348|ref|ZP_21538190.1| transcription factor [Natrialba taiwanensis DSM 12281]
gi|445640591|gb|ELY93678.1| transcription factor [Natrialba taiwanensis DSM 12281]
Length = 186
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ ++ +L+L+++ A+YNP F + R +EPK ALIF SGKIVCTGA
Sbjct: 10 IENVVASTGIDQELNLEQVGDDLPEADYNPEHFPGLVYRTQEPKAAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
SE + + +++ +G + + ++QNIV S D L + G
Sbjct: 70 SSEPAVRESLSIVFEVLRGLGIDIPESPTIEVQNIVASIDFGSQFNLNAIAIGLGLEDVE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ P+ L+F SGK +ITGAK + + A N +
Sbjct: 130 YEPEQFPGLVYRLDDPSAVALLFGSGKAIITGAKTTDAVTHATNAV 175
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 94 KIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVIT 153
KI+N+V S ++ + LE++ G + Y PE FPGL+YR ++P LIF SGK+V T
Sbjct: 9 KIENVVASTGIDQELNLEQV-GDDLPEADYNPEHFPGLVYRTQEPKAAALIFRSGKIVCT 67
Query: 154 GAKAREQIYAAFNNIYPVL 172
GA + + + + ++ VL
Sbjct: 68 GASSEPAVRESLSIVFEVL 86
>gi|407465522|ref|YP_006776404.1| TATA-box binding family protein [Candidatus Nitrosopumilus sp. AR2]
gi|407048710|gb|AFS83462.1| TATA-box binding family protein [Candidatus Nitrosopumilus sp. AR2]
Length = 187
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 106/180 (58%), Gaps = 6/180 (3%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
++N+VA+ +++ K+DL +I + EY+P +F + R+ P+T LIF +GK+VCTGA
Sbjct: 10 VENVVASASVDQKIDLIEITEKFPDTEYHPEQFPGLVFRLTNPRTATLIFRTGKMVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKD--FKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
KSE A A + ++K ++ KD +QNIV + ++ I LE+ S
Sbjct: 70 KSEEMAIKAVNTVVQKLRKGKIKIK-KDAVITVQNIVAAINLGGKIHLEK-AARTLPRSM 127
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN--VYVTYDQ 180
YEPE FPGLI+RM P +L+F SGK+V TGAK +Y + +N++ +L + YDQ
Sbjct: 128 YEPEQFPGLIHRMLDPKTVILLFASGKLVCTGAKKESDVYRSVHNLHALLEEKTLMIYDQ 187
>gi|379335155|gb|AFD03144.1| 2-alkenal reductase [uncultured bacterium W5-77b]
Length = 186
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 101/169 (59%), Gaps = 2/169 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ ++ KLDLK I + + E++P F R+K PKT L+F +GK+VCTG+
Sbjct: 10 IENVVASATIDQKLDLKDITMKFPDVEWHPDMFPGAVFRLKNPKTATLLFRTGKMVCTGS 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KSE A+ A + + ++K ++ + IQNIV S ++ + LE+ S Y
Sbjct: 70 KSEEIARKAVKTVVQELRKGKIKIKKEATVTIQNIVASINLGGRVHLEQA-ARTLPRSMY 128
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
EPE FPGLI+R+ P +LIF SGK+V TG K + ++ + N ++ +L
Sbjct: 129 EPEQFPGLIHRVLDPKTVILIFSSGKLVCTGGKTEKDVFRSVNQLHNLL 177
>gi|440300791|gb|ELP93238.1| TATA-box-binding protein, putative [Entamoeba invadens IP1]
Length = 201
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 100/171 (58%), Gaps = 22/171 (12%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P I N+V+T L +LDL++I A I K+TALI +GKIVCT
Sbjct: 41 PEIANVVSTFQLNQQLDLRQIVKSA----------------ISSLKSTALILKTGKIVCT 84
Query: 63 GAKSESQAKLAARKYARIVQKIGF-PVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFS 121
G +S ++K+AA+ ++KIG+ V+F +F + I SCD++F I L L +
Sbjct: 85 GTRSIEESKIAAK----TIKKIGYNEVRFSNFNVHTI-RSCDIKFQISLRPLYDSNTDMC 139
Query: 122 TYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
YEPE+FP L++R +P VT+L+F +GKVV+TGAK E + A+ I P+L
Sbjct: 140 QYEPEVFPVLVFRTTQPKVTLLVFSTGKVVLTGAKDDENLNTAYTKICPIL 190
>gi|386001066|ref|YP_005919365.1| TATA-box-binding protein [Methanosaeta harundinacea 6Ac]
gi|357209122|gb|AET63742.1| TATA-box-binding protein [Methanosaeta harundinacea 6Ac]
Length = 183
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 92/159 (57%), Gaps = 3/159 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ L + DL KI AEYN +F + R+K P+ LIF+SGK+VCTGA
Sbjct: 7 IENVVASTKLAEEFDLIKIEAELEGAEYNKEKFPGLVYRVKSPRAAFLIFTSGKVVCTGA 66
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKD--FKIQNIVGSCDVEFPIKLERLN-GFHAMFS 121
K+ + A+ ++ IGF D +QNIV S D++ + + G
Sbjct: 67 KNVEDVRTVITNMAQTLKSIGFEDVNLDPEIHVQNIVASADLKTDLNPNAIALGLGLENI 126
Query: 122 TYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQ 160
YEPE FPGL+YR+K P V +LIF SGK+V+TG K+ E+
Sbjct: 127 EYEPEQFPGLVYRIKTPKVVVLIFSSGKLVVTGGKSPEE 165
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIALHA--RNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIVA+ +L+ L+ IAL N EY P +F + RIK PK LIFSSGK+V T
Sbjct: 99 VQNIVASADLKTDLNPNAIALGLGLENIEYEPEQFPGLVYRIKTPKVVVLIFSSGKLVVT 158
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
G KS + + + ++ +G
Sbjct: 159 GGKSPEECEEGVKIVRVQLENLGL 182
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 95 IQNIVGSCDV--EFP-IKLE-RLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKV 150
I+N+V S + EF IK+E L G + Y E FPGL+YR+K P LIF SGKV
Sbjct: 7 IENVVASTKLAEEFDLIKIEAELEG-----AEYNKEKFPGLVYRVKSPRAAFLIFTSGKV 61
Query: 151 VITGAKAREQIYAAFNNIYPVL 172
V TGAK E + N+ L
Sbjct: 62 VCTGAKNVEDVRTVITNMAQTL 83
>gi|341582887|ref|YP_004763379.1| transcription factor [Thermococcus sp. 4557]
gi|340810545|gb|AEK73702.1| transcription factor [Thermococcus sp. 4557]
Length = 190
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 100/172 (58%), Gaps = 2/172 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVA+++L +L+L+K+ N++YNP F + R +EPK LIFSSGK+V TGA
Sbjct: 11 IENIVASVDLFTQLNLEKVIEICPNSKYNPEEFPGIICRFEEPKVALLIFSSGKLVVTGA 70
Query: 65 KSESQAKLAARKYARIVQKIGFP-VQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KS + A K ++++KIG + IQN+V S D+ L+ + Y
Sbjct: 71 KSVEDIERAVNKLIQMLKKIGAKFARAPQIDIQNMVFSGDIGMEFNLDAV-ALSLPNCEY 129
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
EPE FPG+IYR+K+P +L+F SGK+V +GAK+ + A + L Y
Sbjct: 130 EPEQFPGVIYRVKEPRAVILLFSSGKIVCSGAKSEHDAWEAVRKLLRELEKY 181
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 52/82 (63%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+V + ++ + +L +AL N EY P +F V R+KEP+ L+FSSGKIVC+GA
Sbjct: 102 IQNMVFSGDIGMEFNLDAVALSLPNCEYEPEQFPGVIYRVKEPRAVILLFSSGKIVCSGA 161
Query: 65 KSESQAKLAARKYARIVQKIGF 86
KSE A A RK R ++K G
Sbjct: 162 KSEHDAWEAVRKLLRELEKYGL 183
>gi|335441192|ref|ZP_08561913.1| transcription factor [Halorhabdus tiamatea SARL4B]
gi|334888363|gb|EGM26662.1| transcription factor [Halorhabdus tiamatea SARL4B]
Length = 186
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 96/166 (57%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +LDL+ +A+ A+Y+P +F + R +EPK+ ALIF SGKIVCTGA
Sbjct: 10 IENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQEPKSAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS + + ++ + V + + +QNIV S D+ + L + G
Sbjct: 70 KSTDDVHESLQIVFGKLRDLNIQVDEDPEIVVQNIVTSADLGRNLNLNAIAIGLGLENIE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ P+V L+F SGK+VITG K + A + I
Sbjct: 130 YEPEQFPGLVYRLDDPDVVALLFGSGKLVITGGKEPDDAKKAVDKI 175
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 4 VIQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVC 61
V+QNIV + +L L+L IA L N EY P +F + R+ +P AL+F SGK+V
Sbjct: 100 VVQNIVTSADLGRNLNLNAIAIGLGLENIEYEPEQFPGLVYRLDDPDVVALLFGSGKLVI 159
Query: 62 TGAKSESQAKLAARKYARIVQKIGF 86
TG K AK A K ++++G
Sbjct: 160 TGGKEPDDAKKAVDKIVSRLEELGL 184
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
I+N+V S + + L+ + + Y+PE FPGL+YR ++P LIF SGK+V
Sbjct: 8 INIENVVASTGIGQELDLQSV-AMDLEGADYDPEQFPGLVYRTQEPKSAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIYP---VLNVYVTYD 179
TGAK+ + ++ + ++ LN+ V D
Sbjct: 67 TGAKSTDDVHESLQIVFGKLRDLNIQVDED 96
>gi|386874579|ref|ZP_10116817.1| transcription factor [Candidatus Nitrosopumilus salaria BD31]
gi|386807612|gb|EIJ66993.1| transcription factor [Candidatus Nitrosopumilus salaria BD31]
Length = 186
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 98/170 (57%), Gaps = 2/170 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I N+VA+ + +LDL I EY+P +F R+K PKT L+F SGK+VCTGA
Sbjct: 10 IVNVVASATINQRLDLVDITKKFPAVEYHPEQFPGAVFRLKSPKTATLLFGSGKMVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDF-KIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KS+ A+ A +K +++K ++ + IQNIV S ++ + LE+ S Y
Sbjct: 70 KSQELAETAVKKVVELLRKGKVKIKSEPIVTIQNIVSSINLGGKVSLEQ-AARTLPRSMY 128
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
EPE FPGLI+RM P +LIF SGK+V GAK + ++ + N I+ +L
Sbjct: 129 EPEQFPGLIHRMLDPKTVILIFSSGKLVCVGAKLEKDVHRSVNQIHSLLE 178
>gi|340503459|gb|EGR30047.1| tata-box binding protein, putative [Ichthyophthirius multifiliis]
Length = 184
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 95/162 (58%), Gaps = 9/162 (5%)
Query: 15 ECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAA 74
E K DL I +N +YNP RF AV MRIKEPK T LI++SG + G KS +++ AA
Sbjct: 7 EFKFDLTTIGQKCKNTQYNPRRFPAVFMRIKEPKATGLIYASGNMTIVGTKSIEESQRAA 66
Query: 75 RKYARIVQKI----GFPVQFKDFKIQ--NIVGSCDVEFPIKLERLN--GFHAMFSTYEPE 126
K + +++ +F++ KIQ NIV SC + + I L LN H F+TYE +
Sbjct: 67 EKMLKDIKRALEIKEGECEFQEKKIQVRNIVASCKLGYKINLNSLNEDNEHNKFATYE-D 125
Query: 127 LFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
FPGLIY+ N+ LIF SGK+V TGAK+ + I AF +
Sbjct: 126 TFPGLIYKKFNSNIVALIFASGKMVFTGAKSEQDIKNAFEQM 167
Score = 38.9 bits (89), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 5 IQNIVATINLECKLDLKKIAL---HARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVC 61
++NIVA+ L K++L + H + A Y + F + + ALIF+SGK+V
Sbjct: 93 VRNIVASCKLGYKINLNSLNEDNEHNKFATYEDT-FPGLIYKKFNSNIVALIFASGKMVF 151
Query: 62 TGAKSESQAKLAARKYARIVQK 83
TGAKSE K A + + QK
Sbjct: 152 TGAKSEQDIKNAFEQMGQAFQK 173
>gi|84489891|ref|YP_448123.1| transcription factor [Methanosphaera stadtmanae DSM 3091]
gi|121731087|sp|Q2NFC3.1|TBP_METST RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|84373210|gb|ABC57480.1| TATA-box binding protein [Methanosphaera stadtmanae DSM 3091]
Length = 183
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 95/158 (60%), Gaps = 4/158 (2%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
++NIVA+ L L+L KIA N EYN +F + ++K+PKT ALIF SGK+VCTGA
Sbjct: 8 VENIVASATLGKSLELPKIAPALENVEYNLEQFPGLVFKLKDPKTAALIFGSGKLVCTGA 67
Query: 65 KSESQAKLAARKYARIVQKIG--FPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
K + A ++++ P +F + KIQNIV S ++ + LE + +
Sbjct: 68 KCIEDSIKAIHMTVDKIRELDTEIPEEF-EIKIQNIVASANLGKVLNLEAV-ALDLENTE 125
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQ 160
YEPE FPGL+YR+ P V +L+F SGKVV TGAK +Q
Sbjct: 126 YEPEQFPGLVYRLSDPKVVLLLFGSGKVVCTGAKTADQ 163
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 47/72 (65%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQNIVA+ NL L+L+ +AL N EY P +F + R+ +PK L+F SGK+VCTGA
Sbjct: 99 IQNIVASANLGKVLNLEAVALDLENTEYEPEQFPGLVYRLSDPKVVLLLFGSGKVVCTGA 158
Query: 65 KSESQAKLAARK 76
K+ QA L +K
Sbjct: 159 KTADQALLGVQK 170
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 92 DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVV 151
+ K++NIV S + ++L ++ Y E FPGL++++K P LIF SGK+V
Sbjct: 5 EIKVENIVASATLGKSLELPKIAPALENVE-YNLEQFPGLVFKLKDPKTAALIFGSGKLV 63
Query: 152 ITGAKAREQIYAAFN 166
TGAK E A +
Sbjct: 64 CTGAKCIEDSIKAIH 78
>gi|383619863|ref|ZP_09946269.1| transcription factor [Halobiforma lacisalsi AJ5]
gi|435849205|ref|YP_007311455.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Natronococcus occultus SP4]
gi|448312598|ref|ZP_21502340.1| transcription factor [Natronolimnobius innermongolicus JCM 12255]
gi|448315726|ref|ZP_21505366.1| transcription factor [Natronococcus jeotgali DSM 18795]
gi|448401315|ref|ZP_21571551.1| transcription factor [Haloterrigena limicola JCM 13563]
gi|448696585|ref|ZP_21697997.1| transcription factor [Halobiforma lacisalsi AJ5]
gi|448708683|ref|ZP_21701101.1| transcription factor [Halobiforma nitratireducens JCM 10879]
gi|433675473|gb|AGB39665.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Natronococcus occultus SP4]
gi|445601049|gb|ELY55043.1| transcription factor [Natronolimnobius innermongolicus JCM 12255]
gi|445610861|gb|ELY64628.1| transcription factor [Natronococcus jeotgali DSM 18795]
gi|445666578|gb|ELZ19237.1| transcription factor [Haloterrigena limicola JCM 13563]
gi|445783213|gb|EMA34048.1| transcription factor [Halobiforma lacisalsi AJ5]
gi|445793090|gb|EMA43681.1| transcription factor [Halobiforma nitratireducens JCM 10879]
Length = 186
Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 96/166 (57%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +LDL+ +A+ A+Y+P +F + R + PK+ ALIF SGKIVCTGA
Sbjct: 10 IENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQNPKSAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS + R ++++ V + + +QNIV S D+ + L + G
Sbjct: 70 KSTDDVHESLRIVFDKLRELQIQVNEDPEIVVQNIVTSADLGRNLNLNAIAIGLGLENIE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ +P V L+F SGK+VITG K E A + I
Sbjct: 130 YEPEQFPGLVYRLDEPEVVALLFGSGKLVITGGKKPEDAEHAVDKI 175
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 4 VIQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVC 61
V+QNIV + +L L+L IA L N EY P +F + R+ EP+ AL+F SGK+V
Sbjct: 100 VVQNIVTSADLGRNLNLNAIAIGLGLENIEYEPEQFPGLVYRLDEPEVVALLFGSGKLVI 159
Query: 62 TGAKSESQAKLAARKYARIVQKIGF 86
TG K A+ A K ++ +G
Sbjct: 160 TGGKKPEDAEHAVDKIVSRLEDLGL 184
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
I+N+V S + + L+ + + Y+PE FPGL+YR + P LIF SGK+V
Sbjct: 8 INIENVVASTGIGQELDLQSV-AMDLEGADYDPEQFPGLVYRTQNPKSAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIYPVL 172
TGAK+ + ++ + ++ L
Sbjct: 67 TGAKSTDDVHESLRIVFDKL 86
>gi|242398131|ref|YP_002993555.1| Transcription factor TFIID [Thermococcus sibiricus MM 739]
gi|259517220|sp|C6A0R1.1|TBP_THESM RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|242264524|gb|ACS89206.1| Transcription factor TFIID [Thermococcus sibiricus MM 739]
Length = 185
Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 98/172 (56%), Gaps = 2/172 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVA+++L LDL+K+ +++YNP F + R EPK L+FSSGK+V TGA
Sbjct: 8 IENIVASVDLFASLDLEKVIEICPHSKYNPEEFPGIICRFDEPKVALLVFSSGKLVVTGA 67
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KS + A K ++ KIG + + IQN+V S D++ L+ + Y
Sbjct: 68 KSVDDIQAAVSKLVEMLSKIGTKFGRAPEIDIQNMVFSGDLKMEFNLDAV-ALVLPNCEY 126
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
EPE FPG+IYR+K P +L+F SGK+V +GAK+ + A + L+ Y
Sbjct: 127 EPEQFPGVIYRVKDPKAVILLFSSGKIVCSGAKSEHDAWEAVKKLLHELDKY 178
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 51/82 (62%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+V + +L+ + +L +AL N EY P +F V R+K+PK L+FSSGKIVC+GA
Sbjct: 99 IQNMVFSGDLKMEFNLDAVALVLPNCEYEPEQFPGVIYRVKDPKAVILLFSSGKIVCSGA 158
Query: 65 KSESQAKLAARKYARIVQKIGF 86
KSE A A +K + K G
Sbjct: 159 KSEHDAWEAVKKLLHELDKYGL 180
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 92 DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVV 151
+ +I+NIV S D+ + LE++ S Y PE FPG+I R +P V +L+F SGK+V
Sbjct: 5 ELRIENIVASVDLFASLDLEKVIEI-CPHSKYNPEEFPGIICRFDEPKVALLVFSSGKLV 63
Query: 152 ITGAKAREQIYAAFNNIYPVLN 173
+TGAK+ + I AA + + +L+
Sbjct: 64 VTGAKSVDDIQAAVSKLVEMLS 85
>gi|327282209|ref|XP_003225836.1| PREDICTED: beclin 1-associated autophagy-related key regulator-like
[Anolis carolinensis]
Length = 613
Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats.
Identities = 54/71 (76%), Positives = 62/71 (87%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIVAT+NL CKLDLK IALHARNAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 129 IVPQLQNIVATVNLACKLDLKNIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 188
Query: 61 CTGAKSESQAK 71
CTGAK S+ K
Sbjct: 189 CTGAKRFSEKK 199
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 94 KIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVIT 153
++QNIV + ++ + L+ + HA + Y P+ F +I R+++P T LIF SGK+V T
Sbjct: 132 QLQNIVATVNLACKLDLKNI-ALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 190
Query: 154 GAK 156
GAK
Sbjct: 191 GAK 193
>gi|452207289|ref|YP_007487411.1| TATA-binding transcription initiation factor [Natronomonas
moolapensis 8.8.11]
gi|452083389|emb|CCQ36681.1| TATA-binding transcription initiation factor [Natronomonas
moolapensis 8.8.11]
Length = 187
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 93/166 (56%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ +++ +L L +A+ ++Y+P F + R +EP+ LIF SGKIVCTGA
Sbjct: 10 IENVVASTDIDQELALDSLAMDLSGSDYDPDNFPGLIYRTQEPQAANLIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
+ + + ++ +G V + +QNIV S D+ + L + GF
Sbjct: 70 NTVDDVHSSLQIVCETLRDLGIDVIEAPTITVQNIVSSADLRAQLNLNAIAIGFGLEDVE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ P+V L+F SGKVVITGAK + A +
Sbjct: 130 YEPEQFPGLVYRLDTPDVVTLLFGSGKVVITGAKTPDAAEEALKKV 175
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
I+N+V S D++ + L+ L S Y+P+ FPGLIYR ++P LIF SGK+V
Sbjct: 8 IDIENVVASTDIDQELALDSL-AMDLSGSDYDPDNFPGLIYRTQEPQAANLIFRSGKIVC 66
Query: 153 TGAKAREQIYAAF 165
TGA + ++++
Sbjct: 67 TGANTVDDVHSSL 79
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 2 APVI--QNIVATINLECKLDLKKIALH--ARNAEYNPSRFSAVTMRIKEPKTTALIFSSG 57
AP I QNIV++ +L +L+L IA+ + EY P +F + R+ P L+F SG
Sbjct: 96 APTITVQNIVSSADLRAQLNLNAIAIGFGLEDVEYEPEQFPGLVYRLDTPDVVTLLFGSG 155
Query: 58 KIVCTGAKSESQAKLAARKYARIVQKIGF 86
K+V TGAK+ A+ A +K + + ++G
Sbjct: 156 KVVITGAKTPDAAEEALKKVSGELSELGL 184
>gi|159905083|ref|YP_001548745.1| transcription factor [Methanococcus maripaludis C6]
gi|226703561|sp|A9A840.1|TBP_METM6 RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|159886576|gb|ABX01513.1| TATA-box binding family protein [Methanococcus maripaludis C6]
Length = 181
Score = 119 bits (297), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 98/175 (56%), Gaps = 5/175 (2%)
Query: 1 MAPVIQ--NIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGK 58
M P I+ N+V + + +DL+ A NAEY P +F + R+ EPK LIF SGK
Sbjct: 1 MEPEIKIVNVVVSTQIGTDIDLEYAADILDNAEYEPEQFPGLVCRLSEPKVALLIFRSGK 60
Query: 59 IVCTGAKSESQAKLAARKYARIVQKIGFP-VQFKDFKIQNIVGSCDVEFPIKLERLNGFH 117
+ CTGAK + A +A K + +++ G + + +QN+V + ++ L+ ++
Sbjct: 61 LNCTGAKCKEDAVIAIHKIIKELKEAGMDLIDNPEVNVQNMVATTELGMEPNLDDISTLE 120
Query: 118 AMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
+ YEPE FPGL+YR+ P V +LIF SGKVVITG K E Y A++ I L
Sbjct: 121 C--TEYEPEQFPGLVYRLSDPKVVVLIFGSGKVVITGLKVIEDAYKAYDKISKTL 173
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
+QN+VAT L + +L I+ EY P +F + R+ +PK LIF SGK+V TG
Sbjct: 98 VQNMVATTELGMEPNLDDIS-TLECTEYEPEQFPGLVYRLSDPKVVVLIFGSGKVVITGL 156
Query: 65 KSESQAKLAARKYARIVQKI 84
K A A K ++ ++++
Sbjct: 157 KVIEDAYKAYDKISKTLKEL 176
>gi|390961570|ref|YP_006425404.1| TATA-box binding protein [Thermococcus sp. CL1]
gi|390519878|gb|AFL95610.1| TATA-box binding protein [Thermococcus sp. CL1]
Length = 187
Score = 119 bits (297), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 100/172 (58%), Gaps = 2/172 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVA+++L +L+L+K+ N++YNP F + R +EPK LIFSSGK+V TGA
Sbjct: 8 IENIVASVDLFTQLNLEKVIEICPNSKYNPEEFPGIICRFEEPKVALLIFSSGKLVVTGA 67
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KS + A K ++++KIG + IQN+V S D+ L+ + Y
Sbjct: 68 KSVEDIERAVNKLIQMLKKIGAKFGRAPQIDIQNMVFSGDIGMEFNLDAV-ALSLPNCEY 126
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
EPE FPG+IYR+K+P +L+F SGK+V +GAK+ + A + L Y
Sbjct: 127 EPEQFPGVIYRVKEPRAVILLFSSGKIVCSGAKSEHDAWEAVRKLLRELEKY 178
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 52/82 (63%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+V + ++ + +L +AL N EY P +F V R+KEP+ L+FSSGKIVC+GA
Sbjct: 99 IQNMVFSGDIGMEFNLDAVALSLPNCEYEPEQFPGVIYRVKEPRAVILLFSSGKIVCSGA 158
Query: 65 KSESQAKLAARKYARIVQKIGF 86
KSE A A RK R ++K G
Sbjct: 159 KSEHDAWEAVRKLLRELEKYGL 180
>gi|429191762|ref|YP_007177440.1| TATA-box binding protein [Natronobacterium gregoryi SP2]
gi|448325091|ref|ZP_21514490.1| transcription factor [Natronobacterium gregoryi SP2]
gi|429135980|gb|AFZ72991.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Natronobacterium gregoryi SP2]
gi|445616448|gb|ELY70074.1| transcription factor [Natronobacterium gregoryi SP2]
Length = 186
Score = 119 bits (297), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 95/166 (57%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +LDL+ +A+ A+Y+P +F + R + PK+ ALIF SGKIVCTGA
Sbjct: 10 IENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQNPKSAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS + R ++++ V + + +QNIV S D+ + L + G
Sbjct: 70 KSTDDVHESLRIVFDKLRELQIQVNEDPEIVVQNIVTSADLGRNLNLNAIAIGLGLENIE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ P V L+F SGK+VITG K E A + I
Sbjct: 130 YEPEQFPGLVYRLDDPEVVALLFGSGKLVITGGKKPEDAEHAVDKI 175
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 4 VIQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVC 61
V+QNIV + +L L+L IA L N EY P +F + R+ +P+ AL+F SGK+V
Sbjct: 100 VVQNIVTSADLGRNLNLNAIAIGLGLENIEYEPEQFPGLVYRLDDPEVVALLFGSGKLVI 159
Query: 62 TGAKSESQAKLAARKYARIVQKIGF 86
TG K A+ A K ++ +G
Sbjct: 160 TGGKKPEDAEHAVDKIVTRLEDLGL 184
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
I+N+V S + + L+ + + Y+PE FPGL+YR + P LIF SGK+V
Sbjct: 8 INIENVVASTGIGQELDLQSV-AMDLEGADYDPEQFPGLVYRTQNPKSAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIYPVL 172
TGAK+ + ++ + ++ L
Sbjct: 67 TGAKSTDDVHESLRIVFDKL 86
>gi|289581532|ref|YP_003479998.1| TATA-box binding family protein [Natrialba magadii ATCC 43099]
gi|336252658|ref|YP_004595765.1| TATA-box binding family protein [Halopiger xanaduensis SH-6]
gi|433589465|ref|YP_007278961.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Natrinema pellirubrum DSM 15624]
gi|448283054|ref|ZP_21474333.1| transcription factor [Natrialba magadii ATCC 43099]
gi|448354487|ref|ZP_21543243.1| transcription factor [Natrialba hulunbeirensis JCM 10989]
gi|448357153|ref|ZP_21545859.1| transcription factor [Natrialba chahannaoensis JCM 10990]
gi|448381388|ref|ZP_21561591.1| transcription factor [Haloterrigena thermotolerans DSM 11522]
gi|289531085|gb|ADD05436.1| TATA-box binding family protein [Natrialba magadii ATCC 43099]
gi|335336647|gb|AEH35886.1| TATA-box binding family protein [Halopiger xanaduensis SH-6]
gi|433304245|gb|AGB30057.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Natrinema pellirubrum DSM 15624]
gi|445574762|gb|ELY29250.1| transcription factor [Natrialba magadii ATCC 43099]
gi|445637375|gb|ELY90525.1| transcription factor [Natrialba hulunbeirensis JCM 10989]
gi|445649961|gb|ELZ02892.1| transcription factor [Natrialba chahannaoensis JCM 10990]
gi|445663196|gb|ELZ15950.1| transcription factor [Haloterrigena thermotolerans DSM 11522]
Length = 186
Score = 119 bits (297), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 95/166 (57%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +LDL+ +A+ A+Y+P +F + R + PK+ ALIF SGKIVCTGA
Sbjct: 10 IENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQNPKSAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS + R ++++ V + + +QNIV S D+ + L + G
Sbjct: 70 KSTDDVHESLRIVFDKLRELQIQVNEDPEIVVQNIVTSADLGRNLNLNAIAIGLGLENIE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ P V L+F SGK+VITG K E A + I
Sbjct: 130 YEPEQFPGLVYRLDDPEVVALLFGSGKLVITGGKKPEDAEHAVDKI 175
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 4 VIQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVC 61
V+QNIV + +L L+L IA L N EY P +F + R+ +P+ AL+F SGK+V
Sbjct: 100 VVQNIVTSADLGRNLNLNAIAIGLGLENIEYEPEQFPGLVYRLDDPEVVALLFGSGKLVI 159
Query: 62 TGAKSESQAKLAARKYARIVQKIGF 86
TG K A+ A K ++ +G
Sbjct: 160 TGGKKPEDAEHAVDKIVSRLEDLGL 184
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
I+N+V S + + L+ + + Y+PE FPGL+YR + P LIF SGK+V
Sbjct: 8 INIENVVASTGIGQELDLQSV-AMDLEGADYDPEQFPGLVYRTQNPKSAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIYPVL 172
TGAK+ + ++ + ++ L
Sbjct: 67 TGAKSTDDVHESLRIVFDKL 86
>gi|358332952|dbj|GAA51533.1| transcription initiation factor TFIID TATA-box-binding protein
[Clonorchis sinensis]
Length = 696
Score = 119 bits (297), Expect = 7e-25, Method: Composition-based stats.
Identities = 63/151 (41%), Positives = 94/151 (62%), Gaps = 2/151 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I N+V ++ C L LK+IA + + EY + + V MR++ P T A I+SSGKI CTGA
Sbjct: 66 ITNVVVMASMRCHLRLKEIARSSVDVEYKALQ-NHVIMRLRSPYTVATIWSSGKIWCTGA 124
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYE 124
S ++AK AR+ AR + K GFP +F +++ NI+ +C + F ++LE L M YE
Sbjct: 125 NSLAKAKTGARRIARRIAKCGFPCRFSKYRVVNIMATCHLPFRVRLEELVKEKPMQMCYE 184
Query: 125 PELFPGLIYRMKKPNVTML-IFLSGKVVITG 154
PEL PGL ++ + T+L +F +G+VVI G
Sbjct: 185 PELAPGLTFKTDLNSSTLLKVFSTGRVVIMG 215
>gi|448727075|ref|ZP_21709452.1| transcription factor [Halococcus morrhuae DSM 1307]
gi|448737752|ref|ZP_21719787.1| transcription factor [Halococcus thailandensis JCM 13552]
gi|445792275|gb|EMA42886.1| transcription factor [Halococcus morrhuae DSM 1307]
gi|445803308|gb|EMA53606.1| transcription factor [Halococcus thailandensis JCM 13552]
Length = 189
Score = 119 bits (297), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 97/171 (56%), Gaps = 2/171 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +LDL+ +A+ A+Y+P +F + R +EPK+ ALIF SGKIVCTGA
Sbjct: 12 IENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQEPKSAALIFRSGKIVCTGA 71
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS + + ++ + V+ + +QNIV S D++ + L + G
Sbjct: 72 KSTADVHESLEIVFDKLRDLEIRVEEDPEIVVQNIVTSADLQKTLNLNAIAIGLGLENIE 131
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
YEPE FPGL+YR+ P V L+F SGK+VITG K A + I L+
Sbjct: 132 YEPEQFPGLVYRLDDPEVVALLFGSGKLVITGGKEPADAEHAVDKITDRLD 182
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 4 VIQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVC 61
V+QNIV + +L+ L+L IA L N EY P +F + R+ +P+ AL+F SGK+V
Sbjct: 102 VVQNIVTSADLQKTLNLNAIAIGLGLENIEYEPEQFPGLVYRLDDPEVVALLFGSGKLVI 161
Query: 62 TGAKSESQAKLAARKYARIVQKIGF 86
TG K + A+ A K + ++G
Sbjct: 162 TGGKEPADAEHAVDKITDRLDELGL 186
>gi|395646355|ref|ZP_10434215.1| TATA-box-binding protein [Methanofollis liminatans DSM 4140]
gi|395443095|gb|EJG07852.1| TATA-box-binding protein [Methanofollis liminatans DSM 4140]
Length = 186
Score = 119 bits (297), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVA+ + LDL I+ + A+YN RF V +R+++PK AL+F SGK+V TGA
Sbjct: 11 IENIVASAKVTDSLDLPAISSRIQGADYNKKRFPGVVIRMQDPKIAALVFGSGKVVLTGA 70
Query: 65 KS-ESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS ES +K ++ + IQNIV S D+ PI L ++ GF+
Sbjct: 71 KSVESLSKGLEILGGKLRDLDIDIDADLTYTIQNIVTSADLGKPINLNKIAIGFNLDRIE 130
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAK 156
YEPE FPGL+YR++ P V +L+F SGK++ITG K
Sbjct: 131 YEPEQFPGLVYRLEDPKVVVLLFGSGKLIITGGK 164
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIAL--HARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
IQNIV + +L ++L KIA+ + EY P +F + R+++PK L+F SGK++ T
Sbjct: 102 IQNIVTSADLGKPINLNKIAIGFNLDRIEYEPEQFPGLVYRLEDPKVVVLLFGSGKLIIT 161
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
G K AKLA RK + +G
Sbjct: 162 GGKQPGDAKLAVRKIIADLSNLGL 185
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 9/79 (11%)
Query: 91 KDFKIQNIVGSCDV----EFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFL 146
+ KI+NIV S V + P R+ G + Y + FPG++ RM+ P + L+F
Sbjct: 7 ESLKIENIVASAKVTDSLDLPAISSRIQG-----ADYNKKRFPGVVIRMQDPKIAALVFG 61
Query: 147 SGKVVITGAKAREQIYAAF 165
SGKVV+TGAK+ E +
Sbjct: 62 SGKVVLTGAKSVESLSKGL 80
>gi|375083218|ref|ZP_09730248.1| transcription factor [Thermococcus litoralis DSM 5473]
gi|374742172|gb|EHR78580.1| transcription factor [Thermococcus litoralis DSM 5473]
Length = 188
Score = 119 bits (297), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 97/172 (56%), Gaps = 2/172 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVA+++L LDL+K+ +++YNP F + R EPK L+FSSGK+V TGA
Sbjct: 11 IENIVASVDLFASLDLEKVIEICPHSKYNPEEFPGIICRFDEPKVALLVFSSGKLVVTGA 70
Query: 65 KSESQAKLAARKYARIVQKIGFP-VQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KS + A K ++ KIG + + IQN+V S D++ L+ + Y
Sbjct: 71 KSVEDIQAAVSKLVEMLSKIGTKFTRAPEIDIQNMVFSGDLKMEFNLDAV-ALVLPNCEY 129
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
EPE FPG+IYR+K P +L+F SGK+V +GAK+ + A + L Y
Sbjct: 130 EPEQFPGVIYRVKDPKAVILLFSSGKIVCSGAKSEHDAWEAVKKLLHELEKY 181
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 52/82 (63%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+V + +L+ + +L +AL N EY P +F V R+K+PK L+FSSGKIVC+GA
Sbjct: 102 IQNMVFSGDLKMEFNLDAVALVLPNCEYEPEQFPGVIYRVKDPKAVILLFSSGKIVCSGA 161
Query: 65 KSESQAKLAARKYARIVQKIGF 86
KSE A A +K ++K G
Sbjct: 162 KSEHDAWEAVKKLLHELEKYGL 183
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 92 DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVV 151
+ +I+NIV S D+ + LE++ S Y PE FPG+I R +P V +L+F SGK+V
Sbjct: 8 ELRIENIVASVDLFASLDLEKVIEI-CPHSKYNPEEFPGIICRFDEPKVALLVFSSGKLV 66
Query: 152 ITGAKAREQIYAAFNNIYPVLN 173
+TGAK+ E I AA + + +L+
Sbjct: 67 VTGAKSVEDIQAAVSKLVEMLS 88
>gi|358340644|dbj|GAA48493.1| TATA-box-binding protein [Clonorchis sinensis]
Length = 170
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 49/84 (58%), Positives = 67/84 (79%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P+I N++AT+NL C ++L+K+ LH R+AEYNP RF MR++EP+ T LIF +GK+VCT
Sbjct: 38 PMIHNVIATVNLGCHIELRKVVLHIRSAEYNPKRFPGAVMRLREPRVTCLIFGTGKMVCT 97
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
GA+SE++ L ARK ARI+QKIGF
Sbjct: 98 GARSEAECHLGARKCARILQKIGF 121
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 95 IQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITG 154
I N++ + ++ I+L ++ H + Y P+ FPG + R+++P VT LIF +GK+V TG
Sbjct: 40 IHNVIATVNLGCHIELRKVV-LHIRSAEYNPKRFPGAVMRLREPRVTCLIFGTGKMVCTG 98
Query: 155 AKAREQIY 162
A++ + +
Sbjct: 99 ARSEAECH 106
>gi|399578906|ref|ZP_10772650.1| hypothetical protein HSB1_46890 [Halogranum salarium B-1]
gi|399235932|gb|EJN56872.1| hypothetical protein HSB1_46890 [Halogranum salarium B-1]
Length = 189
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +++L+++A+ + A+YNP F + R+++PK LIF SGKIVCTGA
Sbjct: 10 IENVVASTGIGTEIELEQLAMDLQGADYNPENFPGIVYRLQDPKAATLIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS A ++ ++ +G V + +QNIV S D+ + L + G
Sbjct: 70 KSIEYVHAACQRVFDDLRTLGIDVDDDPEVIVQNIVASADLGDSLNLNAIAIGLGLENIE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAK 156
YEPE FPGL+YR+ P V L+F SGK+VITG K
Sbjct: 130 YEPEQFPGLVYRIDDPKVVALLFGSGKLVITGGK 163
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 4 VIQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVC 61
++QNIVA+ +L L+L IA L N EY P +F + RI +PK AL+F SGK+V
Sbjct: 100 IVQNIVASADLGDSLNLNAIAIGLGLENIEYEPEQFPGLVYRIDDPKVVALLFGSGKLVI 159
Query: 62 TGAKSESQAKLAARKYARIVQKIGFP 87
TG K+ S AK A + ++G P
Sbjct: 160 TGGKTPSDAKRAVTVIVERLTELGMP 185
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 95 IQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITG 154
I+N+V S + I+LE+L + Y PE FPG++YR++ P LIF SGK+V TG
Sbjct: 10 IENVVASTGIGTEIELEQL-AMDLQGADYNPENFPGIVYRLQDPKAATLIFRSGKIVCTG 68
Query: 155 AKAREQIYAAFNNIY 169
AK+ E ++AA ++
Sbjct: 69 AKSIEYVHAACQRVF 83
>gi|410722027|ref|ZP_11361343.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Methanobacterium sp. Maddingley MBC34]
gi|410597924|gb|EKQ52528.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Methanobacterium sp. Maddingley MBC34]
Length = 181
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 96/156 (61%), Gaps = 8/156 (5%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
++NIV + + LDL ++A EYN +F + +IKEPKT ALIF SGK+VCTGA
Sbjct: 8 VENIVTSATIGKDLDLPQVAPALEGVEYNLEQFPGLVYKIKEPKTAALIFGSGKLVCTGA 67
Query: 65 KSESQAK----LAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
KS +K +A K + +I P ++ + K+QNIV S ++E + LE +
Sbjct: 68 KSIENSKKAIHIAVDKMRTLDPEI--PHEY-EMKVQNIVASANLEKTLNLEAV-ALDLEN 123
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAK 156
+ YEPE FPGL+YR+ +P V +L+F SGKVV TGAK
Sbjct: 124 TEYEPEQFPGLVYRLGEPKVVLLLFGSGKVVCTGAK 159
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 48/72 (66%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
+QNIVA+ NLE L+L+ +AL N EY P +F + R+ EPK L+F SGK+VCTGA
Sbjct: 99 VQNIVASANLEKTLNLEAVALDLENTEYEPEQFPGLVYRLGEPKVVLLLFGSGKVVCTGA 158
Query: 65 KSESQAKLAARK 76
K+ + A+L K
Sbjct: 159 KTIADAQLGVEK 170
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 9/79 (11%)
Query: 92 DFKIQNIVGSC----DVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLS 147
+ K++NIV S D++ P L G Y E FPGL+Y++K+P LIF S
Sbjct: 5 EIKVENIVTSATIGKDLDLPQVAPALEGVE-----YNLEQFPGLVYKIKEPKTAALIFGS 59
Query: 148 GKVVITGAKAREQIYAAFN 166
GK+V TGAK+ E A +
Sbjct: 60 GKLVCTGAKSIENSKKAIH 78
>gi|10803585|ref|NP_045983.1| transcription factor [Halobacterium sp. NRC-1]
gi|10803718|ref|NP_046116.1| transcription factor [Halobacterium sp. NRC-1]
gi|16120020|ref|NP_395608.1| transcription factor [Halobacterium sp. NRC-1]
gi|16120342|ref|NP_395930.1| transcription factor [Halobacterium sp. NRC-1]
gi|14423949|sp|Q48325.1|TBPB_HALSA RecName: Full=TATA-box-binding protein B; AltName: Full=Box
A-binding protein B; Short=BAP B; AltName: Full=TATA
sequence-binding protein B; Short=TBP B; AltName:
Full=TATA-box factor B
gi|1070345|emb|CAA63691.1| TATA box binding protein [Halobacterium salinarum]
gi|2822316|gb|AAC82822.1| TbpB [Halobacterium sp. NRC-1]
gi|2822449|gb|AAC82955.1| TbpB [Halobacterium sp. NRC-1]
gi|10584112|gb|AAG20743.1| transcription initiation factor IID [Halobacterium sp. NRC-1]
gi|10584490|gb|AAG21065.1| transcription initiation factor IID [Halobacterium sp. NRC-1]
Length = 186
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 96/166 (57%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ +L +L L +++ AEYNP F V R++EPK+ LIF SGK+VCTGA
Sbjct: 10 IENVVASSDLGQELALDQLSTDLPGAEYNPEDFPGVVYRLQEPKSATLIFRSGKVVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS A ++++G V ++QNIV S +E + L + G
Sbjct: 70 KSVDDVHEALGIVFGDIRELGIDVTSNPPIEVQNIVSSASLEQSLNLNAIAIGLGLEQIE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ P+V +L+F SGK+VITG + ++ A ++
Sbjct: 130 YEPEQFPGLVYRLDDPDVVVLLFGSGKLVITGGQNPDEAEQALAHV 175
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
I+N+V S D+ + L++L+ + Y PE FPG++YR+++P LIF SGKVV
Sbjct: 8 IHIENVVASSDLGQELALDQLS-TDLPGAEYNPEDFPGVVYRLQEPKSATLIFRSGKVVC 66
Query: 153 TGAKAREQIYAAFNNIY 169
TGAK+ + ++ A ++
Sbjct: 67 TGAKSVDDVHEALGIVF 83
>gi|2392146|pdb|1AIS|A Chain A, Tata-Binding ProteinTRANSCRIPTION FACTOR (II)BTATA-Box
Complex From Pyrococcus Woesei
Length = 182
Score = 118 bits (296), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 106/177 (59%), Gaps = 10/177 (5%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVA+++L +LDL+K+ N++YNP F + + +PK LIFSSGK+V TGA
Sbjct: 11 IENIVASVDLFAQLDLEKVLDLCPNSKYNPEEFPGIICHLDDPKVALLIFSSGKLVVTGA 70
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK---DFKIQNIVGSCDV--EFPIKLERLNGFHAM 119
KS + A K A+ ++ IG V+FK +QN+V S D+ EF + + L +
Sbjct: 71 KSVQDIERAVAKLAQKLKSIG--VKFKRAPQIDVQNMVFSGDIGREFNLDVVALTLPNC- 127
Query: 120 FSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYV 176
YEPE FPG+IYR+K+P +L+F SGK+V +GAK+ + A + L+ Y+
Sbjct: 128 --EYEPEQFPGVIYRVKEPKSVILLFSSGKIVCSGAKSEADAWEAVRKLLRELDKYL 182
>gi|294496460|ref|YP_003542953.1| TATA binding protein of transcription factor TFIID
[Methanohalophilus mahii DSM 5219]
gi|292667459|gb|ADE37308.1| TATA binding protein of transcription factor TFIID
[Methanohalophilus mahii DSM 5219]
Length = 183
Score = 118 bits (296), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 89/158 (56%), Gaps = 2/158 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ L + DL KI AEYN +F + R+ PK L+F+SGK+VCTGA
Sbjct: 8 IENVVASTKLAEEFDLTKIEAEFEGAEYNKQKFPGLVYRVSNPKAAFLVFTSGKVVCTGA 67
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
K+ A+ + IG K D +QNIV S D++ + L + G
Sbjct: 68 KNVDDVHTVIADMAKKLNGIGIDTLEKPDITVQNIVASADLKAVLNLNAIAIGLGLENIE 127
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQ 160
YEPE FPGL+YR+ +P V +LIF SGK+V+TG K+ E
Sbjct: 128 YEPEQFPGLVYRIDEPKVVVLIFSSGKLVVTGGKSPEN 165
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 92 DFKIQNIVGSCDVEFPIKLERLNGFHAMF--STYEPELFPGLIYRMKKPNVTMLIFLSGK 149
+ KI+N+V S + L ++ A F + Y + FPGL+YR+ P L+F SGK
Sbjct: 5 NIKIENVVASTKLAEEFDLTKI---EAEFEGAEYNKQKFPGLVYRVSNPKAAFLVFTSGK 61
Query: 150 VVITGAKAREQIYAAFNNIYPVLN 173
VV TGAK + ++ ++ LN
Sbjct: 62 VVCTGAKNVDDVHTVIADMAKKLN 85
>gi|389852335|ref|YP_006354569.1| transcription factor (TATA-box-binding protein) [Pyrococcus sp.
ST04]
gi|388249641|gb|AFK22494.1| transcription factor (TATA-box-binding protein) [Pyrococcus sp.
ST04]
Length = 191
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 102/175 (58%), Gaps = 8/175 (4%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVA+++L +LDL+K+ N++YNP F + R +PK LIFSSGK+V TGA
Sbjct: 11 IENIVASVDLFAQLDLEKVLDICPNSKYNPEEFPGIICRFDDPKVALLIFSSGKLVVTGA 70
Query: 65 KSESQAKLAARKYARIVQKI-GFPVQFK---DFKIQNIVGSCDVEFPIKLERLNGFHAMF 120
KS + R A++VQK+ G V+F+ IQN+V S D+ L+ +
Sbjct: 71 KSVQDIE---RAVAKLVQKLKGIGVKFRRAPQIDIQNMVFSGDIGREFNLDNV-ALTLPN 126
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPE FPG+IYR+++P +L+F SGK+V +GAK+ + A + L Y
Sbjct: 127 CEYEPEQFPGVIYRVREPRAVILLFSSGKIVCSGAKSEADAWEAVRKLLRELEKY 181
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 53/82 (64%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+V + ++ + +L +AL N EY P +F V R++EP+ L+FSSGKIVC+GA
Sbjct: 102 IQNMVFSGDIGREFNLDNVALTLPNCEYEPEQFPGVIYRVREPRAVILLFSSGKIVCSGA 161
Query: 65 KSESQAKLAARKYARIVQKIGF 86
KSE+ A A RK R ++K G
Sbjct: 162 KSEADAWEAVRKLLRELEKYGL 183
>gi|157057845|gb|ABV02910.1| TATA box binding protein [Phodopus sungorus]
Length = 68
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/68 (77%), Positives = 63/68 (92%)
Query: 32 YNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGFPVQFK 91
YNP RF+AV MRI+EP+TTALIFSSGK+VCTGAKSE Q++LAARKYAR+VQK+GFP +F
Sbjct: 1 YNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFL 60
Query: 92 DFKIQNIV 99
DFKIQN+V
Sbjct: 61 DFKIQNMV 68
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 27/38 (71%)
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQ 160
Y P+ F +I R+++P T LIF SGK+V TGAK+ EQ
Sbjct: 1 YNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQ 38
>gi|198429838|ref|XP_002128047.1| PREDICTED: similar to TBP-like factor [Ciona intestinalis]
Length = 471
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 104/178 (58%), Gaps = 9/178 (5%)
Query: 7 NIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKS 66
N+V++ + C L+L++IAL + Y V MR++ PK TA ++SSGKIVCTG+ S
Sbjct: 280 NVVSSFRVHCHLNLRQIALEGMDVVYR-RETQKVVMRMRNPKCTAYMWSSGKIVCTGSSS 338
Query: 67 ESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERL----NGFHAMFST 122
A+ +A+++AR + KIGF V+F +F++ N++ C + + I + G H +
Sbjct: 339 AQYARQSAKRFARRLLKIGFKVKFAEFRVVNVLAVCKMPYAIDINEFAKANRGRHC---S 395
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVYVTYDQ 180
YEPEL PG+ +R T+ IF +G V +T A++ E+ A +YP+ + +++
Sbjct: 396 YEPELHPGVTFRESTTKATLKIFSTGSVTVT-ARSVEKAKNAIRTVYPMFQEFYRFEK 452
>gi|70607094|ref|YP_255964.1| transcription factor [Sulfolobus acidocaldarius DSM 639]
gi|68567742|gb|AAY80671.1| TATA-binding protein [Sulfolobus acidocaldarius DSM 639]
Length = 166
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 91/145 (62%), Gaps = 2/145 (1%)
Query: 29 NAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGFPV 88
N EY+P +F + R++ PK T+LIF SGK+V TGAKS + A ++ + ++K G +
Sbjct: 7 NVEYDPDQFPGLIFRLESPKITSLIFKSGKMVVTGAKSTDELIKAVKRIIKTLKKYGMQL 66
Query: 89 QFK-DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLS 147
K +IQNIV S ++ + L++ F + YEPE FPGLIYRM +P V +LIF S
Sbjct: 67 TGKPKIQIQNIVASANLHVIVNLDK-AAFLLENNMYEPEQFPGLIYRMDEPRVVLLIFSS 125
Query: 148 GKVVITGAKAREQIYAAFNNIYPVL 172
GK+VITGAK ++++ A I+ L
Sbjct: 126 GKMVITGAKREDEVHKAVKKIFDKL 150
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQNIVA+ NL ++L K A N Y P +F + R+ EP+ LIFSSGK+V TGA
Sbjct: 74 IQNIVASANLHVIVNLDKAAFLLENNMYEPEQFPGLIYRMDEPRVVLLIFSSGKMVITGA 133
Query: 65 KSESQAKLAARK-YARIVQ 82
K E + A +K + ++V+
Sbjct: 134 KREDEVHKAVKKIFDKLVE 152
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 37/53 (69%)
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
Y+P+ FPGLI+R++ P +T LIF SGK+V+TGAK+ +++ A I L Y
Sbjct: 10 YDPDQFPGLIFRLESPKITSLIFKSGKMVVTGAKSTDELIKAVKRIIKTLKKY 62
>gi|410670721|ref|YP_006923092.1| TATA box binding protein [Methanolobus psychrophilus R15]
gi|409169849|gb|AFV23724.1| TATA box binding protein [Methanolobus psychrophilus R15]
Length = 183
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 92/157 (58%), Gaps = 2/157 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ L + DL KI AEYN +F + R+ +PK L+F+SGK+VCTGA
Sbjct: 8 IENVVASTKLAEEFDLTKIEAEFEGAEYNKQKFPGLVYRVSDPKAAFLVFTSGKVVCTGA 67
Query: 65 KSESQAKLAARKYARIVQKIGF-PVQFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
K+ + A+ + IG ++ + +QNIV S D++ + L + G
Sbjct: 68 KNVADVHTVIGNMAKKLNGIGIKTIEKPEITVQNIVASADLQAVLNLNAIAIGLGLENIE 127
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKARE 159
YEPE FPGL+YR++ P V +LIF SGK+V+TG K+ E
Sbjct: 128 YEPEQFPGLVYRIEDPKVVVLIFSSGKLVVTGGKSPE 164
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 92 DFKIQNIVGSCDVEFPIKLERLNGFHAMF--STYEPELFPGLIYRMKKPNVTMLIFLSGK 149
+ KI+N+V S + L ++ A F + Y + FPGL+YR+ P L+F SGK
Sbjct: 5 NIKIENVVASTKLAEEFDLTKI---EAEFEGAEYNKQKFPGLVYRVSDPKAAFLVFTSGK 61
Query: 150 VVITGAKAREQIYAAFNNIYPVLN 173
VV TGAK ++ N+ LN
Sbjct: 62 VVCTGAKNVADVHTVIGNMAKKLN 85
>gi|448335606|ref|ZP_21524747.1| transcription factor [Natrinema pellirubrum DSM 15624]
gi|445616584|gb|ELY70205.1| transcription factor [Natrinema pellirubrum DSM 15624]
Length = 186
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 95/166 (57%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +LDL+ +A+ A+Y+P +F + R + PK+ ALIF SGKIVCTGA
Sbjct: 10 IENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRSQNPKSAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS + R ++++ V + + +QNIV S D+ + L + G
Sbjct: 70 KSTDDVHESLRIVFDKLRELQIQVNEDPEIVVQNIVTSADLGRNLNLNAIAIGLGLENIE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ P V L+F SGK+VITG K E A + I
Sbjct: 130 YEPEQFPGLVYRLDDPEVVALLFGSGKLVITGGKKPEDAEHAVDKI 175
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 4 VIQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVC 61
V+QNIV + +L L+L IA L N EY P +F + R+ +P+ AL+F SGK+V
Sbjct: 100 VVQNIVTSADLGRNLNLNAIAIGLGLENIEYEPEQFPGLVYRLDDPEVVALLFGSGKLVI 159
Query: 62 TGAKSESQAKLAARKYARIVQKIGF 86
TG K A+ A K ++ +G
Sbjct: 160 TGGKKPEDAEHAVDKIVSRLEDLGL 184
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
I+N+V S + + L+ + + Y+PE FPGL+YR + P LIF SGK+V
Sbjct: 8 INIENVVASTGIGQELDLQSV-AMDLEGADYDPEQFPGLVYRSQNPKSAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIYPVL 172
TGAK+ + ++ + ++ L
Sbjct: 67 TGAKSTDDVHESLRIVFDKL 86
>gi|14590849|ref|NP_142921.1| transcription factor [Pyrococcus horikoshii OT3]
gi|6647870|sp|O58737.1|TBP_PYRHO RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|3257423|dbj|BAA30106.1| 191aa long hypothetical TATA-binding protein (transcription
initiation factor TFIID) [Pyrococcus horikoshii OT3]
Length = 191
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 102/175 (58%), Gaps = 8/175 (4%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVA+++L +LDL+K+ N++YNP F + R +PK LIFSSGK+V TGA
Sbjct: 11 IENIVASVDLFAQLDLEKVLDICPNSKYNPEEFPGIICRFDDPKVALLIFSSGKLVVTGA 70
Query: 65 KSESQAKLAARKYARIVQKI-GFPVQFKD---FKIQNIVGSCDVEFPIKLERLNGFHAMF 120
KS + R A+++QK+ G V+FK +QN+V S D+ L+ +
Sbjct: 71 KSIQDIE---RAVAKLIQKLKGIGVKFKRAPLIDVQNMVFSGDIGREFNLDNV-ALTLPN 126
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPE FPG+IYR+K+P +L+F SGK+V +GAK+ + A + L Y
Sbjct: 127 CEYEPEQFPGVIYRVKEPRAVILLFSSGKIVCSGAKSEADAWEAVRKLLRELEKY 181
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Query: 2 APVI--QNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKI 59
AP+I QN+V + ++ + +L +AL N EY P +F V R+KEP+ L+FSSGKI
Sbjct: 97 APLIDVQNMVFSGDIGREFNLDNVALTLPNCEYEPEQFPGVIYRVKEPRAVILLFSSGKI 156
Query: 60 VCTGAKSESQAKLAARKYARIVQKIGF 86
VC+GAKSE+ A A RK R ++K G
Sbjct: 157 VCSGAKSEADAWEAVRKLLRELEKYGL 183
>gi|408381757|ref|ZP_11179305.1| transcription factor [Methanobacterium formicicum DSM 3637]
gi|407815688|gb|EKF86258.1| transcription factor [Methanobacterium formicicum DSM 3637]
Length = 181
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 94/154 (61%), Gaps = 4/154 (2%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
++NIVA+ L +DL ++A EYN +F + ++KEPKT ALIF SGK+VCTGA
Sbjct: 8 VENIVASATLGKSVDLPQVAPALEGVEYNLEQFPGLVYKLKEPKTAALIFGSGKLVCTGA 67
Query: 65 KSESQAKLAARKYARIVQKI--GFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
KS +K A ++ + P +F + K+QNIV S +++ + LE + +
Sbjct: 68 KSIENSKKAIHIAVDKMRTLDPDIPHEF-EIKVQNIVASANLDKTLNLEAV-ALDLENTE 125
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAK 156
YEPE FPGL+YR+ P V +L+F SGKVV TGAK
Sbjct: 126 YEPEQFPGLVYRLGDPKVVLLLFGSGKVVCTGAK 159
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 48/72 (66%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
+QNIVA+ NL+ L+L+ +AL N EY P +F + R+ +PK L+F SGK+VCTGA
Sbjct: 99 VQNIVASANLDKTLNLEAVALDLENTEYEPEQFPGLVYRLGDPKVVLLLFGSGKVVCTGA 158
Query: 65 KSESQAKLAARK 76
K+ S A+L K
Sbjct: 159 KTISDAQLGVEK 170
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 40/72 (55%), Gaps = 9/72 (12%)
Query: 92 DFKIQNIVGSC----DVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLS 147
+ K++NIV S V+ P L G Y E FPGL+Y++K+P LIF S
Sbjct: 5 EIKVENIVASATLGKSVDLPQVAPALEGVE-----YNLEQFPGLVYKLKEPKTAALIFGS 59
Query: 148 GKVVITGAKARE 159
GK+V TGAK+ E
Sbjct: 60 GKLVCTGAKSIE 71
>gi|6573566|pdb|1D3U|A Chain A, Tata-Binding ProteinTRANSCRIPTION FACTOR (II)BBRE+TATA-
Box Complex From Pyrococcus Woesei
Length = 181
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 105/176 (59%), Gaps = 10/176 (5%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVA+++L +LDL+K+ N++YNP F + + +PK LIFSSGK+V TGA
Sbjct: 11 IENIVASVDLFAQLDLEKVLDLCPNSKYNPEEFPGIICHLDDPKVALLIFSSGKLVVTGA 70
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK---DFKIQNIVGSCDV--EFPIKLERLNGFHAM 119
KS + A K A+ ++ IG V+FK +QN+V S D+ EF + + L +
Sbjct: 71 KSVQDIERAVAKLAQKLKSIG--VKFKRAPQIDVQNMVFSGDIGREFNLDVVALTLPNC- 127
Query: 120 FSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPE FPG+IYR+K+P +L+F SGK+V +GAK+ + A + L+ Y
Sbjct: 128 --EYEPEQFPGVIYRVKEPKSVILLFSSGKIVCSGAKSEADAWEAVRKLLRELDKY 181
>gi|257076321|ref|ZP_05570682.1| transcription factor [Ferroplasma acidarmanus fer1]
Length = 184
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 94/162 (58%), Gaps = 2/162 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVA+ +L LDL +IAL +EY P +F + R+K+PKT LIF SGK+ CTGA
Sbjct: 9 IENIVASTSLAEHLDLSRIALALEGSEYEPEQFPGLIYRLKDPKTAVLIFRSGKVNCTGA 68
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST- 122
K+ K ++K V D +QNIV D+E + L + + +
Sbjct: 69 KNLENVKKTIDIIIDKLKKAKIEVYDNPDIIVQNIVAVYDLESDLNLTDIAMSLGLENVE 128
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAA 164
YEPE FPGL+YR+++P V +L+F SGKVV TGAK +I A
Sbjct: 129 YEPEQFPGLVYRVEEPKVVLLLFGSGKVVCTGAKEESEIEQA 170
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 4 VIQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVC 61
++QNIVA +LE L+L IA L N EY P +F + R++EPK L+F SGK+VC
Sbjct: 99 IVQNIVAVYDLESDLNLTDIAMSLGLENVEYEPEQFPGLVYRVEEPKVVLLLFGSGKVVC 158
Query: 62 TGAKSESQAKLAARKYARIVQKIGF 86
TGAK ES+ + A K + +QK+G
Sbjct: 159 TGAKEESEIEQAVIKVKKELQKVGL 183
>gi|448730264|ref|ZP_21712572.1| transcription factor [Halococcus saccharolyticus DSM 5350]
gi|448735254|ref|ZP_21717470.1| transcription factor [Halococcus salifodinae DSM 8989]
gi|445793432|gb|EMA44004.1| transcription factor [Halococcus saccharolyticus DSM 5350]
gi|445798592|gb|EMA48989.1| transcription factor [Halococcus salifodinae DSM 8989]
Length = 189
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 95/166 (57%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +LDL+ +A+ A+Y+P +F + R +EPK+ ALIF SGKIVCTGA
Sbjct: 12 IENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQEPKSAALIFRSGKIVCTGA 71
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS + + ++ + V+ + +QNIV S D++ + L + G
Sbjct: 72 KSTADVHESLEIVFDKLRDLEIRVEDDPEIVVQNIVTSADLQKTLNLNAIAIGLGLENIE 131
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ P V L+F SGK+VITG K A + I
Sbjct: 132 YEPEQFPGLVYRLDDPEVVALLFGSGKLVITGGKEPADAEHAVDKI 177
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 4 VIQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVC 61
V+QNIV + +L+ L+L IA L N EY P +F + R+ +P+ AL+F SGK+V
Sbjct: 102 VVQNIVTSADLQKTLNLNAIAIGLGLENIEYEPEQFPGLVYRLDDPEVVALLFGSGKLVI 161
Query: 62 TGAKSESQAKLAARK 76
TG K + A+ A K
Sbjct: 162 TGGKEPADAEHAVDK 176
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
I+N+V S + + L+ + + Y+PE FPGL+YR ++P LIF SGK+V
Sbjct: 10 INIENVVASTGIGQELDLQSV-AMDLEGADYDPEQFPGLVYRTQEPKSAALIFRSGKIVC 68
Query: 153 TGAKAREQIYAAFNNIYPVL 172
TGAK+ ++ + ++ L
Sbjct: 69 TGAKSTADVHESLEIVFDKL 88
>gi|18977667|ref|NP_579024.1| transcription factor [Pyrococcus furiosus DSM 3638]
gi|397651790|ref|YP_006492371.1| transcription factor [Pyrococcus furiosus COM1]
gi|48429154|sp|P62000.1|TBP_PYRFU RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|48429155|sp|P62001.1|TBP_PYRWO RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|1942573|pdb|1PCZ|A Chain A, Structure Of Tata-Binding Protein
gi|1942574|pdb|1PCZ|B Chain B, Structure Of Tata-Binding Protein
gi|498649|gb|AAA73447.1| TATA-binding protein [Pyrococcus woesei]
gi|1245168|gb|AAA93368.1| TATA-box binding protein [Pyrococcus furiosus]
gi|18893395|gb|AAL81419.1| transcription initiation factor TFIID (TATA-box factor) chain a
(TATA sequence-binding protein) (tbp) [Pyrococcus
furiosus DSM 3638]
gi|393189381|gb|AFN04079.1| transcription factor [Pyrococcus furiosus COM1]
Length = 191
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 105/176 (59%), Gaps = 10/176 (5%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVA+++L +LDL+K+ N++YNP F + + +PK LIFSSGK+V TGA
Sbjct: 11 IENIVASVDLFAQLDLEKVLDLCPNSKYNPEEFPGIICHLDDPKVALLIFSSGKLVVTGA 70
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK---DFKIQNIVGSCDV--EFPIKLERLNGFHAM 119
KS + A K A+ ++ IG V+FK +QN+V S D+ EF + + L +
Sbjct: 71 KSVQDIERAVAKLAQKLKSIG--VKFKRAPQIDVQNMVFSGDIGREFNLDVVALTLPNC- 127
Query: 120 FSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPE FPG+IYR+K+P +L+F SGK+V +GAK+ + A + L+ Y
Sbjct: 128 --EYEPEQFPGVIYRVKEPKSVILLFSSGKIVCSGAKSEADAWEAVRKLLRELDKY 181
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 53/81 (65%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
+QN+V + ++ + +L +AL N EY P +F V R+KEPK+ L+FSSGKIVC+GA
Sbjct: 102 VQNMVFSGDIGREFNLDVVALTLPNCEYEPEQFPGVIYRVKEPKSVILLFSSGKIVCSGA 161
Query: 65 KSESQAKLAARKYARIVQKIG 85
KSE+ A A RK R + K G
Sbjct: 162 KSEADAWEAVRKLLRELDKYG 182
>gi|15921539|ref|NP_377208.1| transcription factor [Sulfolobus tokodaii str. 7]
Length = 166
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 91/145 (62%), Gaps = 2/145 (1%)
Query: 29 NAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGFPV 88
N EY+P +F + R++ PK T+LIF SGK+V TGAKS + A ++ + +++ G +
Sbjct: 7 NVEYDPDQFPGLIFRLEAPKVTSLIFKSGKMVVTGAKSTDELIKAVKRIIKTLKRYGMNL 66
Query: 89 QFK-DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLS 147
K +IQNIV S ++ + L++ F + YEPE FPGLIYRM+ P V +LIF S
Sbjct: 67 TGKPKIQIQNIVASANLHVIVNLDK-AAFLLENNMYEPEQFPGLIYRMEDPRVVLLIFSS 125
Query: 148 GKVVITGAKAREQIYAAFNNIYPVL 172
GK+VITGAK E+++ A I+ L
Sbjct: 126 GKMVITGAKREEEVHKAVKKIFDKL 150
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQNIVA+ NL ++L K A N Y P +F + R+++P+ LIFSSGK+V TGA
Sbjct: 74 IQNIVASANLHVIVNLDKAAFLLENNMYEPEQFPGLIYRMEDPRVVLLIFSSGKMVITGA 133
Query: 65 KSESQAKLAARK-YARIVQ 82
K E + A +K + ++V+
Sbjct: 134 KREEEVHKAVKKIFDKLVE 152
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 37/53 (69%)
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
Y+P+ FPGLI+R++ P VT LIF SGK+V+TGAK+ +++ A I L Y
Sbjct: 10 YDPDQFPGLIFRLEAPKVTSLIFKSGKMVVTGAKSTDELIKAVKRIIKTLKRY 62
>gi|322368133|ref|ZP_08042702.1| TATA-box binding family protein [Haladaptatus paucihalophilus
DX253]
gi|320552149|gb|EFW93794.1| TATA-box binding family protein [Haladaptatus paucihalophilus
DX253]
Length = 186
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 95/166 (57%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +LDL+ +A+ A+Y+P +F + R + PK+ ALIF SGKIVCTGA
Sbjct: 10 IENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQNPKSAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS + + ++++ V + +QNIV S D+ + L + G
Sbjct: 70 KSTADVHESLEIVFDKLRELNIQVNDDPEIVVQNIVTSADLGRNLNLNAIAIGLGLENIE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ +P V L+F SGK+VITG K E A + I
Sbjct: 130 YEPEQFPGLVYRLDEPEVVALLFGSGKLVITGGKKPEDAEQAVDKI 175
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 4 VIQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVC 61
V+QNIV + +L L+L IA L N EY P +F + R+ EP+ AL+F SGK+V
Sbjct: 100 VVQNIVTSADLGRNLNLNAIAIGLGLENIEYEPEQFPGLVYRLDEPEVVALLFGSGKLVI 159
Query: 62 TGAKSESQAKLAARKYARIVQKIGF 86
TG K A+ A K ++++G
Sbjct: 160 TGGKKPEDAEQAVDKIVSRLEELGL 184
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
I+N+V S + + L+ + + Y+PE FPGL+YR + P LIF SGK+V
Sbjct: 8 INIENVVASTGIGQELDLQSV-AMDLEGADYDPEQFPGLVYRTQNPKSAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIYP---VLNVYVTYD 179
TGAK+ ++ + ++ LN+ V D
Sbjct: 67 TGAKSTADVHESLEIVFDKLRELNIQVNDD 96
>gi|386874609|ref|ZP_10116844.1| transcription factor [Candidatus Nitrosopumilus salaria BD31]
gi|386807582|gb|EIJ66966.1| transcription factor [Candidatus Nitrosopumilus salaria BD31]
Length = 187
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 108/182 (59%), Gaps = 10/182 (5%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
++N+VA+ +++ K+DL I + EY+P +F + R+ P+T LIF +GK+VCTGA
Sbjct: 10 VENVVASASVDQKIDLITITEKFPDTEYHPEQFPGLVFRLTNPRTATLIFRTGKMVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKI-GFPVQFKD---FKIQNIVGSCDVEFPIKLERLNGFHAMF 120
KSE ++A + +VQK+ ++ K+ +QNIV + ++ I LE+
Sbjct: 70 KSE---EMAIKAVNTVVQKLRKGKIKIKNDAVITVQNIVAAINLGGKIHLEKA-ARTLPR 125
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNV--YVTY 178
S YEPE FPGLI+RM P +L+F SGK+V TGAK +Y + +N++ +L + Y
Sbjct: 126 SMYEPEQFPGLIHRMLDPKTVILLFASGKLVCTGAKKESDVYRSVHNLHALLEEKDLMIY 185
Query: 179 DQ 180
DQ
Sbjct: 186 DQ 187
>gi|448371909|ref|ZP_21557028.1| transcription factor [Natrialba aegyptia DSM 13077]
gi|445647000|gb|ELY99980.1| transcription factor [Natrialba aegyptia DSM 13077]
Length = 186
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 93/166 (56%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ ++ +L+L+++ A+YNP F + R +EPK ALIF SGKIVCTGA
Sbjct: 10 IENVVASTGIDQELNLEQVGDDLPEADYNPEHFPGLVYRTQEPKAAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
SE + + +++ +G + + ++Q IV S D L + G
Sbjct: 70 SSEPAVRESLSTVFEVLRDLGIDISESPTIEVQIIVASVDFGSQFNLNAIAIGLGLEDVE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ P+ L+F SGK +ITGAK + + A N +
Sbjct: 130 YEPEQFPGLVYRLDDPSAVALLFGSGKAIITGAKTTDAVTHATNAV 175
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 94 KIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVIT 153
KI+N+V S ++ + LE++ G + Y PE FPGL+YR ++P LIF SGK+V T
Sbjct: 9 KIENVVASTGIDQELNLEQV-GDDLPEADYNPEHFPGLVYRTQEPKAAALIFRSGKIVCT 67
Query: 154 GAKAREQIYAAFNNIYPVL 172
GA + + + + ++ VL
Sbjct: 68 GASSEPAVRESLSTVFEVL 86
>gi|116202165|ref|XP_001226894.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88177485|gb|EAQ84953.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 84
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/77 (68%), Positives = 63/77 (81%)
Query: 97 NIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAK 156
NIVGSCD++FPI+LE L H FS+YEPELFPGLIYRM KP + +LIF+SGK+V+TGAK
Sbjct: 3 NIVGSCDIKFPIRLEGLASKHHNFSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAK 62
Query: 157 AREQIYAAFNNIYPVLN 173
RE+IY AF IYPVL
Sbjct: 63 VREEIYQAFEMIYPVLQ 79
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 7 NIVATINLECKLDLKKIALHARN-AEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAK 65
NIV + +++ + L+ +A N + Y P F + R+ +PK LIF SGKIV TGAK
Sbjct: 3 NIVGSCDIKFPIRLEGLASKHHNFSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAK 62
Query: 66 SESQ 69
+
Sbjct: 63 VREE 66
>gi|134046443|ref|YP_001097928.1| transcription factor [Methanococcus maripaludis C5]
gi|132664068|gb|ABO35714.1| TATA binding protein of transcription factor TFIID [Methanococcus
maripaludis C5]
Length = 181
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 97/175 (55%), Gaps = 5/175 (2%)
Query: 1 MAPVIQ--NIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGK 58
M P I+ N+V + + +DL+ A NAEY P +F + R+ +PK LIF SGK
Sbjct: 1 MEPEIKIVNVVVSTQIGTDIDLEYAADILDNAEYEPEQFPGLVCRLSDPKVALLIFRSGK 60
Query: 59 IVCTGAKSESQAKLAARKYARIVQKIGFP-VQFKDFKIQNIVGSCDVEFPIKLERLNGFH 117
+ CTGAK + A +A K + +++ G + + +QN+V + ++ L+ ++
Sbjct: 61 LNCTGAKCKEDAVIAINKITKELKEAGMDLIDNPEVNVQNMVATTELGMEPNLDDISTLE 120
Query: 118 AMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVL 172
+ YEPE FPGL+YR+ P V +LIF SGKVVITG K E Y A+ I L
Sbjct: 121 C--TEYEPEQFPGLVYRLSDPKVVVLIFGSGKVVITGLKVIEDAYRAYEKISKTL 173
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
+QN+VAT L + +L I+ EY P +F + R+ +PK LIF SGK+V TG
Sbjct: 98 VQNMVATTELGMEPNLDDIS-TLECTEYEPEQFPGLVYRLSDPKVVVLIFGSGKVVITGL 156
Query: 65 KSESQAKLAARKYARIVQKI 84
K A A K ++ ++++
Sbjct: 157 KVIEDAYRAYEKISKTLKEL 176
>gi|284163428|ref|YP_003401707.1| TATA-box binding family protein [Haloterrigena turkmenica DSM 5511]
gi|448307952|ref|ZP_21497838.1| transcription factor [Natronorubrum bangense JCM 10635]
gi|448320837|ref|ZP_21510322.1| transcription factor [Natronococcus amylolyticus DSM 10524]
gi|448330303|ref|ZP_21519586.1| transcription factor [Natrinema versiforme JCM 10478]
gi|448351218|ref|ZP_21540027.1| transcription factor [Natrialba taiwanensis DSM 12281]
gi|448364173|ref|ZP_21552767.1| transcription factor [Natrialba asiatica DSM 12278]
gi|448367160|ref|ZP_21555008.1| transcription factor [Natrialba aegyptia DSM 13077]
gi|448388559|ref|ZP_21565334.1| transcription factor [Haloterrigena salina JCM 13891]
gi|284013083|gb|ADB59034.1| TATA-box binding family protein [Haloterrigena turkmenica DSM 5511]
gi|445594922|gb|ELY49056.1| transcription factor [Natronorubrum bangense JCM 10635]
gi|445605264|gb|ELY59194.1| transcription factor [Natronococcus amylolyticus DSM 10524]
gi|445611982|gb|ELY65723.1| transcription factor [Natrinema versiforme JCM 10478]
gi|445634902|gb|ELY88076.1| transcription factor [Natrialba taiwanensis DSM 12281]
gi|445645061|gb|ELY98068.1| transcription factor [Natrialba asiatica DSM 12278]
gi|445653644|gb|ELZ06513.1| transcription factor [Natrialba aegyptia DSM 13077]
gi|445670314|gb|ELZ22917.1| transcription factor [Haloterrigena salina JCM 13891]
Length = 186
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 96/166 (57%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +LDL+ +A+ A+Y+P +F + R + PK+ ALIF SGKIVCTGA
Sbjct: 10 IENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQNPKSAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS + R ++++ V + + +QNIV S D+ + L + G
Sbjct: 70 KSTDDVHESLRIVFDKLRELQIQVNEDPEIVVQNIVTSADLGRNLNLNAIAIGLGLENIE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ +P V L+F SGK+VITG K + A + I
Sbjct: 130 YEPEQFPGLVYRLDEPEVVALLFGSGKLVITGGKKPKDAEHAVDKI 175
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 4 VIQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVC 61
V+QNIV + +L L+L IA L N EY P +F + R+ EP+ AL+F SGK+V
Sbjct: 100 VVQNIVTSADLGRNLNLNAIAIGLGLENIEYEPEQFPGLVYRLDEPEVVALLFGSGKLVI 159
Query: 62 TGAKSESQAKLAARKYARIVQKIGF 86
TG K A+ A K ++ +G
Sbjct: 160 TGGKKPKDAEHAVDKIVSRLEDLGL 184
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
I+N+V S + + L+ + + Y+PE FPGL+YR + P LIF SGK+V
Sbjct: 8 INIENVVASTGIGQELDLQSV-AMDLEGADYDPEQFPGLVYRTQNPKSAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIYPVL 172
TGAK+ + ++ + ++ L
Sbjct: 67 TGAKSTDDVHESLRIVFDKL 86
>gi|240102886|ref|YP_002959195.1| TATA box-binding protein, transcription initiation factor TFIID
(tbp) [Thermococcus gammatolerans EJ3]
gi|239910440|gb|ACS33331.1| TATA box-binding protein, transcription initiation factor TFIID
(tbp) [Thermococcus gammatolerans EJ3]
Length = 182
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 103/171 (60%), Gaps = 5/171 (2%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
M+ ++N+VA+I+L ++D++K+A + +YNPS F +++ T LIF SGK+V
Sbjct: 4 MSLKVENVVASIDLHGEIDVEKVASKLDSVQYNPSVFPGAVYKMESFGVTFLIFYSGKLV 63
Query: 61 CTGAKSESQAKLAARKYARIVQKIGFPVQFK---DFKIQNIVGSCDVEFPIKLERLNGFH 117
CTGAKS + A K R ++ +G ++FK + ++QNIV + D+ F +
Sbjct: 64 CTGAKSVETIRKATEKLKRTLESMG--MKFKGEPEIQVQNIVAAGDLGFGTLDLDIVALT 121
Query: 118 AMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE+FPG++YR++ +T+LIF SGKVV++GA+ E I A +
Sbjct: 122 LPNVEYEPEIFPGVVYRVRNSRMTILIFNSGKVVVSGARTEEDIRRAVEEL 172
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 5 IQNIVATINLE-CKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+QNIVA +L LDL +AL N EY P F V R++ + T LIF+SGK+V +G
Sbjct: 99 VQNIVAAGDLGFGTLDLDIVALTLPNVEYEPEIFPGVVYRVRNSRMTILIFNSGKVVVSG 158
Query: 64 AKSESQAKLAARKYARIVQKIGF 86
A++E + A + R +K G
Sbjct: 159 ARTEEDIRRAVEELTRDFEKYGL 181
>gi|340344679|ref|ZP_08667811.1| TATA-box binding protein [Candidatus Nitrosoarchaeum koreensis MY1]
gi|339519820|gb|EGP93543.1| TATA-box binding protein [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 187
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 97/168 (57%), Gaps = 6/168 (3%)
Query: 17 KLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARK 76
K+DL I + EYNP +F + R++ PKT LIF +GK+VCTG KSE A A
Sbjct: 22 KIDLNDITKKFPDTEYNPDQFPGLVFRLQNPKTATLIFRTGKMVCTGGKSEEMAIKAVNT 81
Query: 77 YARIVQKIGFPVQFKDFKI--QNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYR 134
+ ++K G V+ KD +I QNIV S ++ + LE+ S YEPE FPGLI+R
Sbjct: 82 VVQKLRKGGIKVK-KDAEITVQNIVASINLGGKVHLEKA-ARTLPRSMYEPEQFPGLIHR 139
Query: 135 MKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNV--YVTYDQ 180
M P +LIF SGK+V TGAK ++ + +N++ +L + YDQ
Sbjct: 140 MLDPKTVILIFSSGKLVCTGAKNESDVFRSVHNLHALLEEKNLMIYDQ 187
>gi|433637530|ref|YP_007283290.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Halovivax ruber XH-70]
gi|448375336|ref|ZP_21558902.1| transcription factor [Halovivax asiaticus JCM 14624]
gi|433289334|gb|AGB15157.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Halovivax ruber XH-70]
gi|445658890|gb|ELZ11703.1| transcription factor [Halovivax asiaticus JCM 14624]
Length = 186
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +LDL+ +A+ A+Y+P +F + R + PK+ ALIF SGKIVCTGA
Sbjct: 10 IENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQNPKSAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS + R ++++ V + + +QNIV S D+ + L + G
Sbjct: 70 KSTDDVHESLRIVFDKLRELQIQVNEDPEIVVQNIVTSADLGRNLNLNAIAIGLGLENIE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAK 156
YEPE FPGL+YR+ +P V L+F SGK+VITG K
Sbjct: 130 YEPEQFPGLVYRLDEPEVVALLFGSGKLVITGGK 163
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 4 VIQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVC 61
V+QNIV + +L L+L IA L N EY P +F + R+ EP+ AL+F SGK+V
Sbjct: 100 VVQNIVTSADLGRNLNLNAIAIGLGLENIEYEPEQFPGLVYRLDEPEVVALLFGSGKLVI 159
Query: 62 TGAKSESQAKLAARKYARIVQKIGF 86
TG K A+ A K ++ +G
Sbjct: 160 TGGKRPVDAEHAVDKIVSRLEDLGL 184
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
I+N+V S + + L+ + + Y+PE FPGL+YR + P LIF SGK+V
Sbjct: 8 INIENVVASTGIGQELDLQSV-AMDLEGADYDPEQFPGLVYRTQNPKSAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIYPVL 172
TGAK+ + ++ + ++ L
Sbjct: 67 TGAKSTDDVHESLRIVFDKL 86
>gi|448303994|ref|ZP_21493939.1| transcription factor [Natronorubrum sulfidifaciens JCM 14089]
gi|445592081|gb|ELY46273.1| transcription factor [Natronorubrum sulfidifaciens JCM 14089]
Length = 186
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 95/166 (57%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +LDL+ +A+ A+Y+P +F + R + PK+ ALIF SGKIVCTGA
Sbjct: 10 IENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQNPKSAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS + R ++++ V + + +QNIV S D+ + L + G
Sbjct: 70 KSTDDVHESLRIVFDKLRELQIQVNEDPEIVVQNIVTSADLGRNLNLNAIAIGLGLENIE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ P V L+F SGK+VITG K + A + I
Sbjct: 130 YEPEQFPGLVYRLDDPEVVALLFGSGKLVITGGKKPKDAEHAVDKI 175
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 4 VIQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVC 61
V+QNIV + +L L+L IA L N EY P +F + R+ +P+ AL+F SGK+V
Sbjct: 100 VVQNIVTSADLGRNLNLNAIAIGLGLENIEYEPEQFPGLVYRLDDPEVVALLFGSGKLVI 159
Query: 62 TGAKSESQAKLAARKYARIVQKIGF 86
TG K A+ A K ++ +G
Sbjct: 160 TGGKKPKDAEHAVDKIVSRLEDLGL 184
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
I+N+V S + + L+ + + Y+PE FPGL+YR + P LIF SGK+V
Sbjct: 8 INIENVVASTGIGQELDLQSV-AMDLEGADYDPEQFPGLVYRTQNPKSAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIYPVL 172
TGAK+ + ++ + ++ L
Sbjct: 67 TGAKSTDDVHESLRIVFDKL 86
>gi|14521176|ref|NP_126651.1| transcription factor [Pyrococcus abyssi GE5]
gi|13124586|sp|Q9V024.1|TBP_PYRAB RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|5458394|emb|CAB49882.1| TATA box binding protein TFIIB-BBRE complex, chain A [Pyrococcus
abyssi GE5]
gi|380741746|tpe|CCE70380.1| TPA: transcription factor [Pyrococcus abyssi GE5]
Length = 191
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 101/175 (57%), Gaps = 8/175 (4%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVA+++L +LDL+K+ N++YNP F + R +PK LIFSSGK+V TGA
Sbjct: 11 IENIVASVDLFAQLDLEKVLDICPNSKYNPEEFPGIICRFDDPKVALLIFSSGKLVVTGA 70
Query: 65 KSESQAKLAARKYARIVQKI-GFPVQFKD---FKIQNIVGSCDVEFPIKLERLNGFHAMF 120
KS + R A++++K+ G V+FK IQN+V S D+ L+ +
Sbjct: 71 KSIHDIE---RAVAKLIEKLKGIGVKFKRAPLIDIQNMVFSGDIGREFNLDNV-ALTLPN 126
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPE FPG+IYR+K P +L+F SGK+V +GAK+ + A + L Y
Sbjct: 127 CEYEPEQFPGVIYRVKDPRAVILLFSSGKIVCSGAKSEADAWEAVRKLLRELEKY 181
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 53/82 (64%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+V + ++ + +L +AL N EY P +F V R+K+P+ L+FSSGKIVC+GA
Sbjct: 102 IQNMVFSGDIGREFNLDNVALTLPNCEYEPEQFPGVIYRVKDPRAVILLFSSGKIVCSGA 161
Query: 65 KSESQAKLAARKYARIVQKIGF 86
KSE+ A A RK R ++K G
Sbjct: 162 KSEADAWEAVRKLLRELEKYGL 183
>gi|397772369|ref|YP_006539915.1| TATA-box binding family protein [Natrinema sp. J7-2]
gi|448342237|ref|ZP_21531189.1| transcription factor [Natrinema gari JCM 14663]
gi|448346767|ref|ZP_21535649.1| transcription factor [Natrinema altunense JCM 12890]
gi|397681462|gb|AFO55839.1| TATA-box binding family protein [Natrinema sp. J7-2]
gi|445626228|gb|ELY79577.1| transcription factor [Natrinema gari JCM 14663]
gi|445632029|gb|ELY85252.1| transcription factor [Natrinema altunense JCM 12890]
Length = 186
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +LDL+ +A+ A+Y+P +F + R + PK+ ALIF SGKIVCTGA
Sbjct: 10 IENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQNPKSAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS + R ++++ V + + +QNIV S D+ + L + G
Sbjct: 70 KSTDDVHESLRIVFDKLRELQIQVNEDPEIVVQNIVTSADLGRNLNLNAIAIGLGLENIE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAK 156
YEPE FPGL+YR+ +P V L+F SGK+VITG K
Sbjct: 130 YEPEQFPGLVYRLDEPEVVALLFGSGKLVITGGK 163
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 4 VIQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVC 61
V+QNIV + +L L+L IA L N EY P +F + R+ EP+ AL+F SGK+V
Sbjct: 100 VVQNIVTSADLGRNLNLNAIAIGLGLENIEYEPEQFPGLVYRLDEPEVVALLFGSGKLVI 159
Query: 62 TGAKSESQAKLAARKYARIVQKIGF 86
TG K A+ A K ++ +G
Sbjct: 160 TGGKKPVDAEHAVDKIVSRLEDLGL 184
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
I+N+V S + + L+ + + Y+PE FPGL+YR + P LIF SGK+V
Sbjct: 8 INIENVVASTGIGQELDLQSV-AMDLEGADYDPEQFPGLVYRTQNPKSAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIYPVL 172
TGAK+ + ++ + ++ L
Sbjct: 67 TGAKSTDDVHESLRIVFDKL 86
>gi|332159172|ref|YP_004424451.1| transcription factor [Pyrococcus sp. NA2]
gi|331034635|gb|AEC52447.1| transcription factor [Pyrococcus sp. NA2]
Length = 191
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 101/175 (57%), Gaps = 8/175 (4%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVA+++L +LDL+K+ N++YNP F + R +PK LIFSSGK+V TGA
Sbjct: 11 IENIVASVDLFAQLDLEKVLDICPNSKYNPEEFPGIICRFDDPKVALLIFSSGKLVVTGA 70
Query: 65 KSESQAKLAARKYARIVQKI-GFPVQFKD---FKIQNIVGSCDVEFPIKLERLNGFHAMF 120
KS + A A+++QK+ G V+FK IQN+V S D+ L+ +
Sbjct: 71 KSIQDIEKAV---AKLIQKLKGIGVKFKRAPLIDIQNMVFSGDLGREFNLDNV-ALTLPN 126
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPE FPG+IYR+K P +L+F SGK+V +GAK+ + A + L Y
Sbjct: 127 CEYEPEQFPGVIYRVKDPRAVILLFSSGKIVCSGAKSEADAWEAVRKLLRELEKY 181
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 53/82 (64%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+V + +L + +L +AL N EY P +F V R+K+P+ L+FSSGKIVC+GA
Sbjct: 102 IQNMVFSGDLGREFNLDNVALTLPNCEYEPEQFPGVIYRVKDPRAVILLFSSGKIVCSGA 161
Query: 65 KSESQAKLAARKYARIVQKIGF 86
KSE+ A A RK R ++K G
Sbjct: 162 KSEADAWEAVRKLLRELEKYGL 183
>gi|16081349|ref|NP_393677.1| transcription factor [Thermoplasma acidophilum DSM 1728]
gi|14423941|sp|Q9HLM8.1|TBP_THEAC RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|10639343|emb|CAC11345.1| probable TATA-box binding protein (TFIID homolog) [Thermoplasma
acidophilum]
Length = 184
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 97/165 (58%), Gaps = 8/165 (4%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVA+ +L LDL +IAL +EY P +F + R++EPKT LIF SGK+ CTGA
Sbjct: 9 IENIVASTSLAEHLDLSRIALALDGSEYEPEQFPGLIYRLQEPKTAVLIFRSGKVNCTGA 68
Query: 65 KSESQAKLAARKYARIVQKI-GFPVQFKD---FKIQNIVGSCDVEFPIKLERLNGFHAMF 120
K+ K R I+ K+ ++ D +QNIV D+E + L + +
Sbjct: 69 KNIEDVK---RTIKIIIDKLKAADIEVYDDPQIIVQNIVAVYDLESELNLTDIAMSLGLE 125
Query: 121 ST-YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAA 164
+ YEPE FPGL+YR+++P V +L+F SGKVV TGAK +I A
Sbjct: 126 NVEYEPEQFPGLVYRVEEPRVVLLLFGSGKVVCTGAKEESEIEQA 170
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Query: 4 VIQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVC 61
++QNIVA +LE +L+L IA L N EY P +F + R++EP+ L+F SGK+VC
Sbjct: 99 IVQNIVAVYDLESELNLTDIAMSLGLENVEYEPEQFPGLVYRVEEPRVVLLLFGSGKVVC 158
Query: 62 TGAKSESQAKLAARKYARIVQKIGF 86
TGAK ES+ + A K + +QK+G
Sbjct: 159 TGAKEESEIEQAVIKVKKELQKVGL 183
>gi|374633744|ref|ZP_09706109.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Metallosphaera yellowstonensis MK1]
gi|373523532|gb|EHP68452.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Metallosphaera yellowstonensis MK1]
Length = 167
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 90/145 (62%), Gaps = 2/145 (1%)
Query: 29 NAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGFPV 88
N EY+P +F + R++ PK T+LIF SGK+V TGAKS + A ++ + +++ G +
Sbjct: 7 NVEYDPDQFPGLIFRLESPKVTSLIFKSGKMVVTGAKSTEELIKAVKRIIKSLRRYGIRI 66
Query: 89 QFK-DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLS 147
K +IQNIV S ++ + L++ F + YEPE FPGLI+RM P V +LIF S
Sbjct: 67 GGKPKIQIQNIVASANMHVHVNLDKA-AFLLENNMYEPEQFPGLIFRMDDPRVVLLIFSS 125
Query: 148 GKVVITGAKAREQIYAAFNNIYPVL 172
GK+VITGAK +++Y A I+ L
Sbjct: 126 GKMVITGAKREDEVYRAVKKIFDKL 150
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQNIVA+ N+ ++L K A N Y P +F + R+ +P+ LIFSSGK+V TGA
Sbjct: 74 IQNIVASANMHVHVNLDKAAFLLENNMYEPEQFPGLIFRMDDPRVVLLIFSSGKMVITGA 133
Query: 65 KSESQAKLAARK 76
K E + A +K
Sbjct: 134 KREDEVYRAVKK 145
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 37/53 (69%)
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
Y+P+ FPGLI+R++ P VT LIF SGK+V+TGAK+ E++ A I L Y
Sbjct: 10 YDPDQFPGLIFRLESPKVTSLIFKSGKMVVTGAKSTEELIKAVKRIIKSLRRY 62
>gi|330834362|ref|YP_004409090.1| transcription factor [Metallosphaera cuprina Ar-4]
gi|329566501|gb|AEB94606.1| transcription factor [Metallosphaera cuprina Ar-4]
Length = 167
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 90/146 (61%), Gaps = 2/146 (1%)
Query: 29 NAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGFPV 88
N EY+P +F + R++ PK T+LIF SGK+V TGAKS + A ++ + +++ G +
Sbjct: 7 NVEYDPDQFPGLIFRLESPKVTSLIFKSGKMVVTGAKSTEELIKAVKRIIKSLRRYGIRI 66
Query: 89 QFK-DFKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLS 147
K +IQNIV S ++ + L++ F + YEPE FPGLI+RM P V +LIF S
Sbjct: 67 GGKPKIQIQNIVASANMHVHVNLDK-AAFLLENNMYEPEQFPGLIFRMDDPRVVLLIFSS 125
Query: 148 GKVVITGAKAREQIYAAFNNIYPVLN 173
GK+VITGAK +++Y A I+ L
Sbjct: 126 GKMVITGAKREDEVYKAVKKIFDKLE 151
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQNIVA+ N+ ++L K A N Y P +F + R+ +P+ LIFSSGK+V TGA
Sbjct: 74 IQNIVASANMHVHVNLDKAAFLLENNMYEPEQFPGLIFRMDDPRVVLLIFSSGKMVITGA 133
Query: 65 KSESQAKLAARK 76
K E + A +K
Sbjct: 134 KREDEVYKAVKK 145
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 37/53 (69%)
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
Y+P+ FPGLI+R++ P VT LIF SGK+V+TGAK+ E++ A I L Y
Sbjct: 10 YDPDQFPGLIFRLESPKVTSLIFKSGKMVVTGAKSTEELIKAVKRIIKSLRRY 62
>gi|448302231|ref|ZP_21492214.1| transcription factor [Natronorubrum tibetense GA33]
gi|445581890|gb|ELY36238.1| transcription factor [Natronorubrum tibetense GA33]
Length = 186
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +LDL+ +A+ A+Y+P +F + R + PK+ ALIF SGKIVCTGA
Sbjct: 10 IENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQNPKSAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS + R ++++ V + + +QNIV S D+ + L + G
Sbjct: 70 KSTDDVHESLRIVFDKLRELQIQVNEDPEIVVQNIVTSADLGRNLNLNAIAIGLGLENIE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAK 156
YEPE FPGL+YR+ P V L+F SGK+VITG K
Sbjct: 130 YEPEQFPGLVYRLDDPEVVALLFGSGKLVITGGK 163
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 4 VIQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVC 61
V+QNIV + +L L+L IA L N EY P +F + R+ +P+ AL+F SGK+V
Sbjct: 100 VVQNIVTSADLGRNLNLNAIAIGLGLENIEYEPEQFPGLVYRLDDPEVVALLFGSGKLVI 159
Query: 62 TGAKSESQAKLAARKYARIVQKIGF 86
TG K A+ A K ++ +G
Sbjct: 160 TGGKKPVDAEHAVDKIVSRLEDLGL 184
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
I+N+V S + + L+ + + Y+PE FPGL+YR + P LIF SGK+V
Sbjct: 8 INIENVVASTGIGQELDLQSV-AMDLEGADYDPEQFPGLVYRTQNPKSAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIYPVL 172
TGAK+ + ++ + ++ L
Sbjct: 67 TGAKSTDDVHESLRIVFDKL 86
>gi|429191773|ref|YP_007177451.1| TATA-box binding protein [Natronobacterium gregoryi SP2]
gi|448325076|ref|ZP_21514476.1| transcription factor [Natronobacterium gregoryi SP2]
gi|429135991|gb|AFZ73002.1| TATA-box binding protein (TBP), component of TFIID and TFIIIB
[Natronobacterium gregoryi SP2]
gi|445616492|gb|ELY70116.1| transcription factor [Natronobacterium gregoryi SP2]
Length = 186
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 90/156 (57%), Gaps = 2/156 (1%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P I+NIVA+ ++ +LDL+ +A EY+ +F R + PK+ +LIF +GKIVCT
Sbjct: 8 PTIENIVASTGVDQELDLESVAEDLDRTEYDQEKFPGAVYRTQNPKSASLIFRTGKIVCT 67
Query: 63 GAKSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMF 120
G KS + + ++ +G V + IQNIV + D++ + L GF
Sbjct: 68 GTKSPDEVYESLDIVFDALRGLGIDVPSNPEIIIQNIVSTGDLDCRVNLHATAIGFGLEN 127
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAK 156
YEPE FPGL+YR+ P+V LIF SGKVV+TGAK
Sbjct: 128 IEYEPEQFPGLVYRLDDPDVVTLIFGSGKVVVTGAK 163
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 4 VIQNIVATINLECKLDLKKIALH--ARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVC 61
+IQNIV+T +L+C+++L A+ N EY P +F + R+ +P LIF SGK+V
Sbjct: 100 IIQNIVSTGDLDCRVNLHATAIGFGLENIEYEPEQFPGLVYRLDDPDVVTLIFGSGKVVV 159
Query: 62 TGAKSESQAKLA 73
TGAK + A A
Sbjct: 160 TGAKEPADADRA 171
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 95 IQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITG 154
I+NIV S V+ + LE + + Y+ E FPG +YR + P LIF +GK+V TG
Sbjct: 10 IENIVASTGVDQELDLESV-AEDLDRTEYDQEKFPGAVYRTQNPKSASLIFRTGKIVCTG 68
Query: 155 AKAREQIYAAFNNIYPVL 172
K+ +++Y + + ++ L
Sbjct: 69 TKSPDEVYESLDIVFDAL 86
>gi|2833470|sp|Q56253.1|TBP_THECE RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|498255|gb|AAA73412.1| TATA-binding protein [Thermococcus celer]
Length = 189
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 99/172 (57%), Gaps = 2/172 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVA+++L +L+L+++ +++YNP F + R EPK LIFSSGK+V TGA
Sbjct: 8 IENIVASVDLFTQLNLERVIEMCPHSKYNPEEFPGIICRFDEPKVALLIFSSGKLVVTGA 67
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KS + A K ++++KIG + IQN+V S D+ L+ + Y
Sbjct: 68 KSVEDIERAVNKLIQMLKKIGAKFSRAPQIDIQNMVFSGDIGMEFNLDAV-ALSLPNCEY 126
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
EPE FPG+IYR+K+P +L+F SGK+V +GAK+ + A + L Y
Sbjct: 127 EPEQFPGVIYRVKEPRAVILLFSSGKIVCSGAKSEHDAWEAVRKLLRELEKY 178
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
+I+NIV S D+ + LER+ S Y PE FPG+I R +P V +LIF SGK+V+
Sbjct: 6 LRIENIVASVDLFTQLNLERVIEM-CPHSKYNPEEFPGIICRFDEPKVALLIFSSGKLVV 64
Query: 153 TGAKAREQIYAAFNNIYPVL 172
TGAK+ E I A N + +L
Sbjct: 65 TGAKSVEDIERAVNKLIQML 84
>gi|300709793|ref|YP_003735607.1| TATA-box binding family protein [Halalkalicoccus jeotgali B3]
gi|448297437|ref|ZP_21487483.1| transcription factor [Halalkalicoccus jeotgali B3]
gi|299123476|gb|ADJ13815.1| TATA-box binding family protein [Halalkalicoccus jeotgali B3]
gi|445579746|gb|ELY34139.1| transcription factor [Halalkalicoccus jeotgali B3]
Length = 185
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +LDL+ +A+ A+Y+P +F + R + PK+ ALIF SGKIVCTGA
Sbjct: 9 IENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQNPKSAALIFRSGKIVCTGA 68
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS + + ++ + VQ + +QNIV S D+ + L + G
Sbjct: 69 KSTDDVHESLQIVFDKLRDLEIQVQDDPEIVVQNIVTSADLGRNLNLNAIAIGLGLENIE 128
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAK 156
YEPE FPGL+YR+ +P V L+F SGK+VITG K
Sbjct: 129 YEPEQFPGLVYRLDEPKVVALLFGSGKLVITGGK 162
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 4 VIQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVC 61
V+QNIV + +L L+L IA L N EY P +F + R+ EPK AL+F SGK+V
Sbjct: 99 VVQNIVTSADLGRNLNLNAIAIGLGLENIEYEPEQFPGLVYRLDEPKVVALLFGSGKLVI 158
Query: 62 TGAKSESQAKLAARKYARIVQKIGF 86
TG K A+ A K ++ +G
Sbjct: 159 TGGKQPVDAEHAVDKIVSRLEDLGL 183
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
I+N+V S + + L+ + + Y+PE FPGL+YR + P LIF SGK+V
Sbjct: 7 INIENVVASTGIGQELDLQSV-AMDLEGADYDPEQFPGLVYRTQNPKSAALIFRSGKIVC 65
Query: 153 TGAKAREQIYAAFNNIYPVL 172
TGAK+ + ++ + ++ L
Sbjct: 66 TGAKSTDDVHESLQIVFDKL 85
>gi|448302509|ref|ZP_21492488.1| transcription factor [Natronorubrum tibetense GA33]
gi|445581175|gb|ELY35537.1| transcription factor [Natronorubrum tibetense GA33]
Length = 186
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 93/163 (57%), Gaps = 2/163 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+VA+ + +L+L + + +Y+P F + R+++PK T L+F +GKIVCTGA
Sbjct: 10 IQNVVASTGVGQELELDALGQDLDDVQYDPDHFPGLIYRLQDPKATVLLFRTGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
S + A + ++ +G ++ +QNIV + D++ + L + G
Sbjct: 70 TSVHNVQTALQDVFDTLRSLGIEAPADREITVQNIVSNADLDRQLNLNAIAIGLGLENVE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAF 165
YEPE FPGL+YR+ +P +L+F SGK++ITG K RE I +
Sbjct: 130 YEPEQFPGLLYRLDEPEAVVLLFTSGKLLITGVKTREAIEDSL 172
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
+IQN+V S V ++L+ L G Y+P+ FPGLIYR++ P T+L+F +GK+V
Sbjct: 8 IEIQNVVASTGVGQELELDAL-GQDLDDVQYDPDHFPGLIYRLQDPKATVLLFRTGKIVC 66
Query: 153 TGAKAREQIYAAFNNIYPVL 172
TGA + + A +++ L
Sbjct: 67 TGATSVHNVQTALQDVFDTL 86
>gi|37724114|gb|AAO17774.1| TATA-box binding protein [Passer domesticus]
Length = 167
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/67 (79%), Positives = 60/67 (89%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLK IAL ARNAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 101 PQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 160
Query: 63 GAKSESQ 69
GAKSE Q
Sbjct: 161 GAKSEEQ 167
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 94 KIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVIT 153
++QNIV + ++ + L+ + A + Y P+ F +I R+++P T LIF SGK+V T
Sbjct: 102 QLQNIVSTVNLGCKLDLKTI-ALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 160
Query: 154 GAKAREQ 160
GAK+ EQ
Sbjct: 161 GAKSEEQ 167
>gi|13542225|ref|NP_111913.1| transcription factor [Thermoplasma volcanium GSS1]
gi|24638241|sp|Q978J5.1|TBP_THEVO RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|14325659|dbj|BAB60562.1| TATA-binding protein [TBP] [Thermoplasma volcanium GSS1]
Length = 184
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 94/162 (58%), Gaps = 2/162 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVA+ +L LDL +IAL +EY P +F + R+++PKT LIF SGK+ CTGA
Sbjct: 9 IENIVASTSLAEHLDLSRIALALDGSEYEPEQFPGLIYRLQDPKTAVLIFRSGKVNCTGA 68
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST- 122
K+ K + ++ V D +QNIV D+E + L + + +
Sbjct: 69 KNIEDVKRTIKIIIDKLKAANIEVYDDPDIIVQNIVAVYDLESELNLTDIAMSLGLENVE 128
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAA 164
YEPE FPGL+YR+++P V +L+F SGKVV TGAK +I A
Sbjct: 129 YEPEQFPGLVYRVEEPRVVLLLFGSGKVVCTGAKEESEIEQA 170
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Query: 4 VIQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVC 61
++QNIVA +LE +L+L IA L N EY P +F + R++EP+ L+F SGK+VC
Sbjct: 99 IVQNIVAVYDLESELNLTDIAMSLGLENVEYEPEQFPGLVYRVEEPRVVLLLFGSGKVVC 158
Query: 62 TGAKSESQAKLAARKYARIVQKIGF 86
TGAK ES+ + A K + +QK+G
Sbjct: 159 TGAKEESEIEQAVIKVKKELQKVGL 183
>gi|448322383|ref|ZP_21511854.1| transcription factor [Natronococcus amylolyticus DSM 10524]
gi|445601591|gb|ELY55578.1| transcription factor [Natronococcus amylolyticus DSM 10524]
Length = 186
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 96/166 (57%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ ++ +LDL+ +A+ A+Y+P F + R +PK+ ALIF SGKIVCTGA
Sbjct: 10 IENVVASSSIGQELDLQSLAMDLEGADYDPENFPGLVYRTTDPKSAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS + + ++ + V + + +QNIV S D+ + L + G
Sbjct: 70 KSIENVHESLKIVFEELRDLQIEVKEGPEIVVQNIVSSADLGRNLNLNAIAIGLGLENIE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ +PNV L+F SGK+V+TG K + A + I
Sbjct: 130 YEPEQFPGLVYRLDEPNVVALLFGSGKLVVTGGKEVDDARQAIDVI 175
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 4 VIQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVC 61
V+QNIV++ +L L+L IA L N EY P +F + R+ EP AL+F SGK+V
Sbjct: 100 VVQNIVSSADLGRNLNLNAIAIGLGLENIEYEPEQFPGLVYRLDEPNVVALLFGSGKLVV 159
Query: 62 TGAKSESQAKLAARKYARIVQKIGF 86
TG K A+ A ++ +G
Sbjct: 160 TGGKEVDDARQAIDVIVERLEDLGL 184
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
+I+N+V S + + L+ L + Y+PE FPGL+YR P LIF SGK+V
Sbjct: 8 IEIENVVASSSIGQELDLQSL-AMDLEGADYDPENFPGLVYRTTDPKSAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIYPVL 172
TGAK+ E ++ + ++ L
Sbjct: 67 TGAKSIENVHESLKIVFEEL 86
>gi|10803661|ref|NP_046059.1| transcription factor [Halobacterium sp. NRC-1]
gi|169237306|ref|YP_001690512.1| TATA-binding transcription initiation factor [Halobacterium
salinarum R1]
gi|169237349|ref|YP_001690554.1| TATA-binding transcription initiation factor [Halobacterium
salinarum R1]
gi|14423947|sp|O52018.1|TBPD_HALSA RecName: Full=TATA-box-binding protein D; AltName: Full=Box
A-binding protein D; Short=BAP D; AltName: Full=TATA
sequence-binding protein D; Short=TBP D; AltName:
Full=TATA-box factor D
gi|2822392|gb|AAC82898.1| TbpD [Halobacterium sp. NRC-1]
gi|167728372|emb|CAP15175.1| TATA-binding transcription initiation factor [Halobacterium
salinarum R1]
gi|167728865|emb|CAP15756.1| TATA-binding transcription initiation factor [Halobacterium
salinarum R1]
Length = 186
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 92/167 (55%), Gaps = 2/167 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ +L +L L+++A AEYNP F V R+ +PK+ LIF SGK VCTGA
Sbjct: 10 IENVVASTDLSQELALEQLATDLPGAEYNPGDFPGVIYRLDDPKSATLIFDSGKAVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
+S A ++ +G + +QNIV S ++ + L + G
Sbjct: 70 QSVDDVHDAISIVVEDLRDLGIDIPPSPPVHVQNIVCSGSLDQDLNLNAIAIGLGLEDVE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIY 169
YEPE FPGL+YR+ P+V +L+F SGK+VITG + + A I+
Sbjct: 130 YEPEQFPGLVYRLNDPDVVVLLFGSGKLVITGGSNPDDAHHALEIIH 176
>gi|449545513|gb|EMD36484.1| hypothetical protein CERSUDRAFT_95784 [Ceriporiopsis subvermispora
B]
Length = 154
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/143 (47%), Positives = 81/143 (56%), Gaps = 28/143 (19%)
Query: 42 MRIKEPKTTALIFSSGKIVCTGAKSESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGS 101
MR+ + K LIF SGK+V TGAKSE LA+RK ARIVQK+ F F + KIQN +GS
Sbjct: 1 MRVCDLKMAVLIFVSGKLVVTGAKSEDNTCLASRKSARIVQKLEFDPNFSELKIQNTMGS 60
Query: 102 CDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAK----- 156
D FS++EPELFPGL Y M KP V +LIF+S VV+T AK
Sbjct: 61 RD----------------FSSFEPELFPGLTYSMIKPKVVLLIFMSRMVVLTRAKVHIFY 104
Query: 157 -------AREQIYAAFNNIYPVL 172
RE+IY A IY VL
Sbjct: 105 YWEASSPGREEIYTALTTIYTVL 127
>gi|312136408|ref|YP_004003745.1| tata binding protein of transcription factor tfiid [Methanothermus
fervidus DSM 2088]
gi|311224127|gb|ADP76983.1| TATA binding protein of transcription factor TFIID [Methanothermus
fervidus DSM 2088]
Length = 183
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 95/154 (61%), Gaps = 4/154 (2%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVA+ L +DL KI+ ++ +N +F + ++ +PKT ALIF SGK+VCTGA
Sbjct: 10 IENIVASATLGRPIDLSKISKALKSVNFNRKQFPGLVYKLDKPKTAALIFGSGKLVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKI--GFPVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFST 122
KS + A + ++++ P + + KIQNIV S ++ P+ L+ + +
Sbjct: 70 KSVEDSIKAIKTTVNKIREVDPDIPEDY-EIKIQNIVASANLSKPLNLDEI-AMTLENTE 127
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAK 156
YEPE FPGL+YR+ KP V +L+F SGKVV TGA+
Sbjct: 128 YEPEQFPGLVYRLDKPKVVLLLFGSGKVVCTGAR 161
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQNIVA+ NL L+L +IA+ N EY P +F + R+ +PK L+F SGK+VCTGA
Sbjct: 101 IQNIVASANLSKPLNLDEIAMTLENTEYEPEQFPGLVYRLDKPKVVLLLFGSGKVVCTGA 160
Query: 65 KSESQAKLAARKYARIVQKIGF 86
+ AKL +K ++++
Sbjct: 161 RDPKDAKLGVKKTKERLKELNL 182
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 92 DFKIQNIVGSCDVEFPIKLERLNGFHAMFS-TYEPELFPGLIYRMKKPNVTMLIFLSGKV 150
+ +I+NIV S + PI L +++ A+ S + + FPGL+Y++ KP LIF SGK+
Sbjct: 7 EIEIENIVASATLGRPIDLSKIS--KALKSVNFNRKQFPGLVYKLDKPKTAALIFGSGKL 64
Query: 151 VITGAKAREQIYAAF 165
V TGAK+ E A
Sbjct: 65 VCTGAKSVEDSIKAI 79
>gi|20089176|ref|NP_615251.1| transcription factor [Methanosarcina acetivorans C2A]
gi|24638262|sp|Q8TTZ7.1|TBP3_METAC RecName: Full=TATA-box-binding protein 3; AltName: Full=Box
A-binding protein 3; Short=BAP 3; AltName: Full=TATA
sequence-binding protein 3; Short=TBP 3; AltName:
Full=TATA-box factor 3
gi|19914048|gb|AAM03731.1| TATA-binding protein [Methanosarcina acetivorans C2A]
Length = 185
Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 94/165 (56%), Gaps = 4/165 (2%)
Query: 5 IQNIVATINLECKLDLKKIALHA-RNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
I+N+VA+ L + DL KI AEYN ++F + RI PK LIF+SGK+VCTG
Sbjct: 7 IENVVASTALATEFDLVKIMDSGLEGAEYNKTKFPGLVYRIDNPKAAFLIFTSGKVVCTG 66
Query: 64 AKSESQAKLAARKYARIVQKIGFP-VQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMF 120
AK+ + A A A ++ IG + + + +QNIV S D++ + L + F
Sbjct: 67 AKTINNAHKAITNLANKLKDIGCDKINLEPEIHVQNIVASADLKTTLNLNTIAIAFGLEN 126
Query: 121 STYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAF 165
YEPE+FPGLIYR++ P V +L+F SGK+VITG K E
Sbjct: 127 VEYEPEVFPGLIYRVEAPKVVVLVFSSGKLVITGGKCEEDCNGGL 171
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIAL--HARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIVA+ +L+ L+L IA+ N EY P F + R++ PK L+FSSGK+V T
Sbjct: 100 VQNIVASADLKTTLNLNTIAIAFGLENVEYEPEVFPGLIYRVEAPKVVVLVFSSGKLVIT 159
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
G K E R + +G
Sbjct: 160 GGKCEEDCNGGLRIVRKEFDNLGL 183
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 37/74 (50%)
Query: 95 IQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITG 154
I+N+V S + L ++ + Y FPGL+YR+ P LIF SGKVV TG
Sbjct: 7 IENVVASTALATEFDLVKIMDSGLEGAEYNKTKFPGLVYRIDNPKAAFLIFTSGKVVCTG 66
Query: 155 AKAREQIYAAFNNI 168
AK + A N+
Sbjct: 67 AKTINNAHKAITNL 80
>gi|399576129|ref|ZP_10769886.1| transcription factor [Halogranum salarium B-1]
gi|399238840|gb|EJN59767.1| transcription factor [Halogranum salarium B-1]
Length = 186
Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 92/158 (58%), Gaps = 2/158 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +LDL+ +A+ A+Y+P +F + R + PK+ ALIF SGKIVCTGA
Sbjct: 10 IENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQNPKSAALIFRSGKIVCTGA 69
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS + ++++ V+ + +QNIV S D+ + L + G
Sbjct: 70 KSTDDVHESLNIVFDKLRELKIQVEDDPEITVQNIVTSADLGKNLNLNAIAIGLGLENIE 129
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQ 160
YEPE FPGL+YR+ +P V L+F SGK+VITG K E
Sbjct: 130 YEPEQFPGLVYRLDEPKVVALLFGSGKLVITGGKKPED 167
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIV + +L L+L IA L N EY P +F + R+ EPK AL+F SGK+V T
Sbjct: 101 VQNIVTSADLGKNLNLNAIAIGLGLENIEYEPEQFPGLVYRLDEPKVVALLFGSGKLVIT 160
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
G K AK A + ++G
Sbjct: 161 GGKKPEDAKHAVEVITERLSELGL 184
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
I+N+V S + + L+ + + Y+PE FPGL+YR + P LIF SGK+V
Sbjct: 8 INIENVVASTGIGQELDLQSV-AMDLEGADYDPEQFPGLVYRTQNPKSAALIFRSGKIVC 66
Query: 153 TGAKAREQIYAAFNNIYPVL 172
TGAK+ + ++ + N ++ L
Sbjct: 67 TGAKSTDDVHESLNIVFDKL 86
>gi|448730744|ref|ZP_21713048.1| transcription factor [Halococcus saccharolyticus DSM 5350]
gi|445792921|gb|EMA43516.1| transcription factor [Halococcus saccharolyticus DSM 5350]
Length = 191
Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 91/174 (52%), Gaps = 11/174 (6%)
Query: 6 QNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAK 65
QN+VA+ + ++DL+ +A+ A+++P +F + R + T L+F SGKI CTGA
Sbjct: 17 QNVVASSGIGQEIDLESVAMDLTGADFDPGQFPGLIYRPADAAATCLLFRSGKITCTGAG 76
Query: 66 SESQAKLAARKYARIVQKIGFPVQFKDFKIQNIVGSCDVEFPIKLERLN------GFHAM 119
S + + ++G V + +QNIV D+ ERLN G
Sbjct: 77 SIEEVHETVHVAVDALAELGIDVGTPEVTVQNIVSGADLG-----ERLNLNAIAIGLGLE 131
Query: 120 FSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLN 173
YEPE FPGL+YR+ P+V L+F SGK+VITGAK + AA I LN
Sbjct: 132 SVEYEPEQFPGLVYRLDDPDVVALLFGSGKMVITGAKIHDNAEAALEEIIRRLN 185
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 5 IQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIV+ +L +L+L IA L + EY P +F + R+ +P AL+F SGK+V T
Sbjct: 106 VQNIVSGADLGERLNLNAIAIGLGLESVEYEPEQFPGLVYRLDDPDVVALLFGSGKMVIT 165
Query: 63 GAKSESQAKLAARKYARIVQKIGF 86
GAK A+ A + R + +G
Sbjct: 166 GAKIHDNAEAALEEIIRRLNDLGL 189
>gi|409723661|ref|ZP_11270805.1| transcription factor [Halococcus hamelinensis 100A6]
gi|448722730|ref|ZP_21705261.1| transcription factor [Halococcus hamelinensis 100A6]
gi|445788867|gb|EMA39568.1| transcription factor [Halococcus hamelinensis 100A6]
Length = 189
Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 2/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ + +LDL+ +A+ A+Y+P +F + R + PK+ ALIF SGKIVCTGA
Sbjct: 12 IENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQNPKSAALIFRSGKIVCTGA 71
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
KS + + ++ + V+ + +QNIV S D++ + L + G
Sbjct: 72 KSTADVHESLEIVFDKLRDLEIKVEDAPEIVVQNIVTSADLQKTLNLNAIAIGLGLENIE 131
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE FPGL+YR+ P V L+F SGK+VITG K A + I
Sbjct: 132 YEPEQFPGLVYRLDDPEVVALLFGSGKLVITGGKEPADAEHAVDKI 177
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 4 VIQNIVATINLECKLDLKKIA--LHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVC 61
V+QNIV + +L+ L+L IA L N EY P +F + R+ +P+ AL+F SGK+V
Sbjct: 102 VVQNIVTSADLQKTLNLNAIAIGLGLENIEYEPEQFPGLVYRLDDPEVVALLFGSGKLVI 161
Query: 62 TGAKSESQAKLAARK 76
TG K + A+ A K
Sbjct: 162 TGGKEPADAEHAVDK 176
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
I+N+V S + + L+ + + Y+PE FPGL+YR + P LIF SGK+V
Sbjct: 10 INIENVVASTGIGQELDLQSV-AMDLEGADYDPEQFPGLVYRTQNPKSAALIFRSGKIVC 68
Query: 153 TGAKAREQIYAAFNNIYPVL 172
TGAK+ ++ + ++ L
Sbjct: 69 TGAKSTADVHESLEIVFDKL 88
>gi|91773461|ref|YP_566153.1| transcription factor [Methanococcoides burtonii DSM 6242]
gi|91712476|gb|ABE52403.1| TATA-box binding protein [Methanococcoides burtonii DSM 6242]
Length = 206
Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 89/155 (57%), Gaps = 2/155 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ L + DL KI AEYN +F + R+ +PK L+F+SGK+VCTGA
Sbjct: 31 IENVVASTKLAEEFDLIKIEAEFEGAEYNKQKFPGLVYRVTDPKAAFLVFTSGKVVCTGA 90
Query: 65 KSESQAKLAARKYARIVQKIGFP-VQFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
K+ + + A+ + IG + + +QNIV S D+ + L + G
Sbjct: 91 KNVADVHIVIGNMAKKLNGIGIETIADPEITVQNIVASADLHATLNLNAIAIGLGLENIE 150
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKA 157
YEPE FPGL+YR+ P V +LIF SGK+V+TG K+
Sbjct: 151 YEPEQFPGLVYRIADPKVVVLIFSSGKLVVTGGKS 185
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Query: 92 DFKIQNIVGSCDV--EFP-IKLERLNGFHAMF--STYEPELFPGLIYRMKKPNVTMLIFL 146
+ KI+N+V S + EF IK+E A F + Y + FPGL+YR+ P L+F
Sbjct: 28 NIKIENVVASTKLAEEFDLIKIE------AEFEGAEYNKQKFPGLVYRVTDPKAAFLVFT 81
Query: 147 SGKVVITGAKAREQIYAAFNNIYPVLN 173
SGKVV TGAK ++ N+ LN
Sbjct: 82 SGKVVCTGAKNVADVHIVIGNMAKKLN 108
>gi|57640067|ref|YP_182545.1| transcription factor [Thermococcus kodakarensis KOD1]
gi|2833446|sp|Q52366.1|TBP_PYRKO RecName: Full=TATA-box-binding protein; AltName: Full=Box A-binding
protein; Short=BAP; AltName: Full=TATA sequence-binding
protein; Short=TBP; AltName: Full=TATA-box factor
gi|2129420|pir||JC4514 TATA-binding protein - Pyrococcus sp
gi|1405351|dbj|BAA08743.1| TATA binding protein [Pyrococcus sp.]
gi|57158391|dbj|BAD84321.1| transcription initiation factor TFIID [Thermococcus kodakarensis
KOD1]
Length = 190
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 98/172 (56%), Gaps = 2/172 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVA+++L L+L+K+ +++YNP F + R +PK LIFSSGK+V TGA
Sbjct: 11 IENIVASVDLFTDLNLEKVIEICPSSKYNPEEFPGIICRFDDPKVALLIFSSGKLVVTGA 70
Query: 65 KSESQAKLAARKYARIVQKIGFP-VQFKDFKIQNIVGSCDVEFPIKLERLNGFHAMFSTY 123
KS K A K +++KIG + IQN+V S D+ L+ + Y
Sbjct: 71 KSVDDIKRAVYKLIEMLKKIGAKFTREPQIDIQNMVFSGDIGMEFNLDAV-ALILPNCEY 129
Query: 124 EPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
EPE FPG+IYR+K+P +L+F SGK+V +GAK+ + + A + L Y
Sbjct: 130 EPEQFPGVIYRVKEPRAVILLFSSGKIVCSGAKSEQDAWEAVKKLLRELEKY 181
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 52/82 (63%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+V + ++ + +L +AL N EY P +F V R+KEP+ L+FSSGKIVC+GA
Sbjct: 102 IQNMVFSGDIGMEFNLDAVALILPNCEYEPEQFPGVIYRVKEPRAVILLFSSGKIVCSGA 161
Query: 65 KSESQAKLAARKYARIVQKIGF 86
KSE A A +K R ++K G
Sbjct: 162 KSEQDAWEAVKKLLRELEKYGL 183
>gi|298675995|ref|YP_003727745.1| TATA-box-binding family protein [Methanohalobium evestigatum
Z-7303]
gi|298288983|gb|ADI74949.1| TATA-box binding family protein [Methanohalobium evestigatum
Z-7303]
Length = 187
Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 88/159 (55%), Gaps = 4/159 (2%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ L + DL KI AEYN +F + R+ PK L+F+SGK+VCTGA
Sbjct: 12 IENVVASTKLAEEFDLTKIEAEFEGAEYNKQKFPGLVYRVSNPKAAFLVFTSGKVVCTGA 71
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFKD--FKIQNIVGSCDVEFPIKLERLN-GFHAMFS 121
K+ + A+ + IG KD +QNIV S D+ + L + G
Sbjct: 72 KNVDDVHVVIGNMAKKLNDIGIET-IKDPVITVQNIVASADLHAVLNLNAIAIGLGLENI 130
Query: 122 TYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQ 160
YEPE FPGL+YR+ P V +LIF SGK+V+TG K+ +
Sbjct: 131 EYEPEQFPGLVYRIDDPKVVVLIFSSGKLVVTGGKSPDH 169
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 92 DFKIQNIVGSCDVEFPIKLERLNGFHAMF--STYEPELFPGLIYRMKKPNVTMLIFLSGK 149
+ KI+N+V S + L ++ A F + Y + FPGL+YR+ P L+F SGK
Sbjct: 9 NIKIENVVASTKLAEEFDLTKI---EAEFEGAEYNKQKFPGLVYRVSNPKAAFLVFTSGK 65
Query: 150 VVITGAKAREQIYAAFNNIYPVLN 173
VV TGAK + ++ N+ LN
Sbjct: 66 VVCTGAKNVDDVHVVIGNMAKKLN 89
>gi|268324523|emb|CBH38111.1| TATA-box binding protein 2 [uncultured archaeon]
Length = 183
Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 90/155 (58%), Gaps = 2/155 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA + LDL+ + A + +F + R KEPK+ LIF SGK+VCTGA
Sbjct: 8 IENVVANARITESLDLEYVESQLEEAMFTKKKFPGLVYRTKEPKSAFLIFRSGKVVCTGA 67
Query: 65 KSESQAKLAARKYARIVQKIGFPV-QFKDFKIQNIVGSCDVEFPIKLERL-NGFHAMFST 122
K++ ++ K + ++ IG V + +FK+QNIV S D+ + L + G
Sbjct: 68 KTKEGVRVVMDKLSTDLRGIGIEVEEHPEFKVQNIVASADLGKELNLGAIVMGLELEGME 127
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKA 157
YEPE+FPGL+YR+ P +LIF SGK+VITG K
Sbjct: 128 YEPEVFPGLVYRITDPKSAILIFSSGKLVITGGKT 162
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 92 DFKIQNIVGSCDVEFPIKLERLNG--FHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGK 149
D KI+N+V + + + LE + AMF+ + FPGL+YR K+P LIF SGK
Sbjct: 5 DIKIENVVANARITESLDLEYVESQLEEAMFTKKK---FPGLVYRTKEPKSAFLIFRSGK 61
Query: 150 VVITGAKAREQIYAAFNNI 168
VV TGAK +E + + +
Sbjct: 62 VVCTGAKTKEGVRVVMDKL 80
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 5 IQNIVATINLECKLDLKKI--ALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
+QNIVA+ +L +L+L I L EY P F + RI +PK+ LIFSSGK+V T
Sbjct: 99 VQNIVASADLGKELNLGAIVMGLELEGMEYEPEVFPGLVYRITDPKSAILIFSSGKLVIT 158
Query: 63 GAKSESQAK 71
G K+ K
Sbjct: 159 GGKTLDDCK 167
>gi|223476888|ref|YP_002581345.1| TATA-box binding protein [Thermococcus sp. AM4]
gi|214032114|gb|EEB72945.1| TATA-box binding protein [Thermococcus sp. AM4]
Length = 182
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 99/166 (59%), Gaps = 3/166 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
++N+VA+I+L K+D++++A Y+PS F ++ T LIF SGK+VCTGA
Sbjct: 5 VENVVASIDLHGKIDVERVASELDPVHYDPSVFPGAIYKMGSFGVTFLIFYSGKLVCTGA 64
Query: 65 KSESQAKLAARKYARIVQKIGFPVQFK-DFKIQNIVGSCDVEF-PIKLERLNGFHAMFST 122
KS K A + + ++ +G + K + ++QNIV + D F + L+ +
Sbjct: 65 KSVETIKRATEELKQTLESMGMKFRGKPEIRVQNIVAAGDAGFRTLDLDTV-ALTLPNVE 123
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNI 168
YEPE+FPG++YR+K +T+LIF SGK+V++GAK E I A N +
Sbjct: 124 YEPEIFPGVVYRVKNSRITILIFNSGKIVVSGAKTEEDIQRAVNEL 169
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 5 IQNIVATINLECK-LDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTG 63
+QNIVA + + LDL +AL N EY P F V R+K + T LIF+SGKIV +G
Sbjct: 96 VQNIVAAGDAGFRTLDLDTVALTLPNVEYEPEIFPGVVYRVKNSRITILIFNSGKIVVSG 155
Query: 64 AKSESQAKLAARKYARIVQKIGF 86
AK+E + A + +K G
Sbjct: 156 AKTEEDIQRAVNELISEFKKYGL 178
>gi|410962333|ref|XP_003987726.1| PREDICTED: TATA box-binding protein-like protein 2 [Felis catus]
Length = 326
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/63 (80%), Positives = 59/63 (93%)
Query: 3 PVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCT 62
P +QNIV+T+NL CKLDLKKIALHA+NAEYNP RF+AV MRI+EP+TTALIFSSGK+VCT
Sbjct: 252 PQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 311
Query: 63 GAK 65
GAK
Sbjct: 312 GAK 314
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 94 KIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVIT 153
++QNIV + ++ + L+++ HA + Y P+ F +I R+++P T LIF SGK+V T
Sbjct: 253 QLQNIVSTVNLACKLDLKKI-ALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 311
Query: 154 GAK 156
GAK
Sbjct: 312 GAK 314
>gi|281346310|gb|EFB21894.1| hypothetical protein PANDA_021469 [Ailuropoda melanoleuca]
Length = 213
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/65 (78%), Positives = 60/65 (92%)
Query: 1 MAPVIQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIV 60
+ P +QNIV+T+NL CKLDLKKIALHA+NAEYNP RF+AV MRI+EP+TTALIFSSGK+V
Sbjct: 149 IVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 208
Query: 61 CTGAK 65
CTGAK
Sbjct: 209 CTGAK 213
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 94 KIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVIT 153
++QNIV + ++ + L+++ HA + Y P+ F +I R+++P T LIF SGK+V T
Sbjct: 152 QLQNIVSTVNLACKLDLKKI-ALHAKNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCT 210
Query: 154 GAK 156
GAK
Sbjct: 211 GAK 213
>gi|118638415|gb|ABL09366.1| TATA-box binding protein alternative transcript cTBP2 [Gallus
gallus]
Length = 81
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/75 (69%), Positives = 61/75 (81%)
Query: 99 VGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAR 158
VGSCDV+FPI+LE L H FS+YEPELFPGLIYRM KP + +LIF+SGKVV+TGAK R
Sbjct: 1 VGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVR 60
Query: 159 EQIYAAFNNIYPVLN 173
+IY AF NIYP+L
Sbjct: 61 AEIYEAFENIYPILK 75
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 9 VATINLECKLDLKKIAL-HARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGAKSE 67
V + +++ + L+ + L H + + Y P F + R+ +P+ LIF SGK+V TGAK
Sbjct: 1 VGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVR 60
Query: 68 SQ 69
++
Sbjct: 61 AE 62
>gi|240102503|ref|YP_002958812.1| transcription factor [Thermococcus gammatolerans EJ3]
gi|239910057|gb|ACS32948.1| TATA box-binding protein, transcription initiation factor TFIID
(tbp) [Thermococcus gammatolerans EJ3]
Length = 192
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 99/176 (56%), Gaps = 9/176 (5%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVA+++L +L+L+K+ N++YNP F + R EPK LIFSSGK+V TGA
Sbjct: 11 IENIVASVDLFAELNLEKVIEICPNSKYNPEEFPGIICRFDEPKVALLIFSSGKLVVTGA 70
Query: 65 KSESQAKLAARKYARIVQ-KIGF----PVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAM 119
KS + A +K +++ K+G P Q IQN+V S D+ L+ +
Sbjct: 71 KSVEDIERAVKKLTEMLKTKVGTKFTKPPQ---IDIQNMVFSGDIGMEFNLDAV-ALSLP 126
Query: 120 FSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPE FPG+IYR K P +L+F SGK+V +GAK+ + + A + L Y
Sbjct: 127 NCEYEPEQFPGVIYRAKDPKAVILLFSSGKIVCSGAKSEKDAWEAVKKLLRELEKY 182
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 51/82 (62%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
IQN+V + ++ + +L +AL N EY P +F V R K+PK L+FSSGKIVC+GA
Sbjct: 103 IQNMVFSGDIGMEFNLDAVALSLPNCEYEPEQFPGVIYRAKDPKAVILLFSSGKIVCSGA 162
Query: 65 KSESQAKLAARKYARIVQKIGF 86
KSE A A +K R ++K G
Sbjct: 163 KSEKDAWEAVKKLLRELEKYGL 184
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNGFHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVI 152
+I+NIV S D+ + LE++ S Y PE FPG+I R +P V +LIF SGK+V+
Sbjct: 9 LRIENIVASVDLFAELNLEKVIEICPN-SKYNPEEFPGIICRFDEPKVALLIFSSGKLVV 67
Query: 153 TGAKAREQIYAAFNNIYPVLNVYV 176
TGAK+ E I A + +L V
Sbjct: 68 TGAKSVEDIERAVKKLTEMLKTKV 91
>gi|409096743|ref|ZP_11216767.1| transcription factor [Thermococcus zilligii AN1]
Length = 191
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 98/176 (55%), Gaps = 9/176 (5%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+NIVA+++L +L+L+K+ N++YNP F + R +PK LIFSSGK+V TGA
Sbjct: 11 IENIVASVDLFAQLNLEKVIEICPNSKYNPEEFPGIICRFDDPKVALLIFSSGKLVVTGA 70
Query: 65 KSESQAKLAARKYARIV-QKIGF----PVQFKDFKIQNIVGSCDVEFPIKLERLNGFHAM 119
KS K+ K ++ +K+G P Q IQN+V S D+ L+ +
Sbjct: 71 KSVDDIKMGVNKLIELLSKKVGTRFTKPPQ---IDIQNMVFSGDIGMEFNLDAV-ALSLP 126
Query: 120 FSTYEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQIYAAFNNIYPVLNVY 175
YEPE FPG+IYR+K P +L+F SGK+V +GAK+ + A + L Y
Sbjct: 127 NCEYEPEQFPGVIYRVKDPKAVILLFSSGKIVCSGAKSENDAWEAVKRLIRELEKY 182
>gi|20093119|ref|NP_619194.1| transcription factor [Methanosarcina acetivorans C2A]
gi|24638258|sp|Q8TI26.1|TBP1_METAC RecName: Full=TATA-box-binding protein 1; AltName: Full=Box
A-binding protein 1; Short=BAP 1; AltName: Full=TATA
sequence-binding protein 1; Short=TBP 1; AltName:
Full=TATA-box factor 1
gi|19918456|gb|AAM07674.1| TATA-binding protein [Methanosarcina acetivorans C2A]
Length = 183
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 89/158 (56%), Gaps = 2/158 (1%)
Query: 5 IQNIVATINLECKLDLKKIALHARNAEYNPSRFSAVTMRIKEPKTTALIFSSGKIVCTGA 64
I+N+VA+ L + DL I AEYN +F + R+ +PK L+F+SGK+VCTGA
Sbjct: 8 IENVVASTKLAEEFDLTVIESEFEGAEYNKQKFPGLVYRVSDPKAAFLVFTSGKVVCTGA 67
Query: 65 KSESQAKLAARKYARIVQKIGF-PVQFKDFKIQNIVGSCDVEFPIKLERLN-GFHAMFST 122
K+ + A+ + IG ++ +QNIV S D+ + L + G
Sbjct: 68 KNVADVHTVIGNMAKKLNSIGIKTMENPQITVQNIVASADLHTILNLNAIAIGLGLENIE 127
Query: 123 YEPELFPGLIYRMKKPNVTMLIFLSGKVVITGAKAREQ 160
YEPE FPGL+YR+ +P V +LIF SGK+V+TG K+ E
Sbjct: 128 YEPEQFPGLVYRIDEPKVVVLIFSSGKLVVTGGKSPED 165
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 93 FKIQNIVGSCDVEFPIKLERLNG-FHAMFSTYEPELFPGLIYRMKKPNVTMLIFLSGKVV 151
KI+N+V S + L + F + Y + FPGL+YR+ P L+F SGKVV
Sbjct: 6 IKIENVVASTKLAEEFDLTVIESEFEG--AEYNKQKFPGLVYRVSDPKAAFLVFTSGKVV 63
Query: 152 ITGAKAREQIYAAFNNIYPVLN 173
TGAK ++ N+ LN
Sbjct: 64 CTGAKNVADVHTVIGNMAKKLN 85
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.137 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,533,317,669
Number of Sequences: 23463169
Number of extensions: 91925165
Number of successful extensions: 205424
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1192
Number of HSP's successfully gapped in prelim test: 58
Number of HSP's that attempted gapping in prelim test: 201069
Number of HSP's gapped (non-prelim): 1985
length of query: 180
length of database: 8,064,228,071
effective HSP length: 133
effective length of query: 47
effective length of database: 9,238,593,890
effective search space: 434213912830
effective search space used: 434213912830
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 72 (32.3 bits)