Query 047242
Match_columns 217
No_of_seqs 173 out of 1110
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 15:56:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047242.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047242hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oox_A Putative 2OG-Fe(II) oxy 100.0 1.8E-59 6.1E-64 402.1 14.3 210 7-217 4-298 (312)
2 1gp6_A Leucoanthocyanidin diox 100.0 2.3E-57 7.7E-62 395.2 19.3 209 8-217 45-334 (356)
3 1w9y_A 1-aminocyclopropane-1-c 100.0 4.1E-57 1.4E-61 388.3 12.6 207 8-217 2-282 (319)
4 1odm_A Isopenicillin N synthas 100.0 2E-54 6.9E-59 373.4 17.2 205 4-217 3-313 (331)
5 1dcs_A Deacetoxycephalosporin 100.0 4.1E-54 1.4E-58 368.6 11.2 203 8-217 3-294 (311)
6 3on7_A Oxidoreductase, iron/as 100.0 6.2E-50 2.1E-54 338.0 14.2 190 8-200 2-263 (280)
7 2dbn_A Hypothetical protein YB 44.6 10 0.00036 33.3 2.2 45 5-50 96-151 (461)
8 2rg4_A Uncharacterized protein 36.5 20 0.00069 27.9 2.6 24 170-193 185-209 (216)
9 2vf9_A Coat protein; virion, R 27.9 12 0.00041 25.4 -0.1 16 161-176 51-66 (131)
10 3dkq_A PKHD-type hydroxylase S 27.8 23 0.00079 28.3 1.6 69 110-190 101-194 (243)
No 1
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=1.8e-59 Score=402.06 Aligned_cols=210 Identities=21% Similarity=0.310 Sum_probs=179.6
Q ss_pred CCCCcEEeCCCCC----------CCCc---cEEEEEccCCCHHHHHHHHHHHHHHhcCCHHHHhhcCCC-CCCCCcccCC
Q 047242 7 SVELPILDISQPL----------QPSA---GFFLISNHGISRDLYRRLYMISRKLFDLAFDAKLELGPS-SSTNTYTPHF 72 (217)
Q Consensus 7 ~~~iPvIDl~~~~----------~~a~---Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~Gy~~~~ 72 (217)
+.+||||||+.+. ..|| |||||+||||+.++++++++.+++||+||.|+|+++... ...+||.+.+
T Consensus 4 ~~~iPvIDls~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~~g 83 (312)
T 3oox_A 4 TSAIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARGYIPFG 83 (312)
T ss_dssp CCSSCCEETHHHHHCHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTSEEECCC
T ss_pred CCCCCeEEChHhcccHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCcccccccc
Confidence 5689999998763 2456 999999999999999999999999999999999998763 4678997654
Q ss_pred CC-------Ccccccccc-------------cCCCccccC------------------------------CCCchhhHHh
Q 047242 73 IA-------SPFFESLRV-------------SGPNFFASA------------------------------NFENKYYESE 102 (217)
Q Consensus 73 ~~-------~~~~e~~~~-------------~~p~~~~~~------------------------------gl~~~~~~~~ 102 (217)
.+ .||+|.+.+ .++|.||+. |+++++|.+.
T Consensus 84 ~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~ 163 (312)
T 3oox_A 84 VETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFFKPT 163 (312)
T ss_dssp CCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTHHH
T ss_pred ceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHH
Confidence 32 478887754 236889853 8999999999
Q ss_pred hhCCccceeeeecCCCCCCcccccccccccCCCeeEEEEeCCCCceeEEE----------------echhhHHHHHhCCc
Q 047242 103 FKNCHGYLRIINCSPPEALENEVEGLGMHTDMSCITIVYQDEIGGLQTTR----------------RNIGDMLQAWGNER 166 (217)
Q Consensus 103 ~~~~~~~lrll~Y~p~~~~~~~~~g~~~HtD~~~lTlL~qd~~~GLqv~~----------------VniGd~l~~~snG~ 166 (217)
+..+.+.||+++| |+|+.++..+|+++|||+|+||||+||+++||||+. ||+||+||+||||+
T Consensus 164 ~~~~~~~lr~~~Y-pp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~TnG~ 242 (312)
T 3oox_A 164 VQDGNSVLRLLHY-PPIPKDATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVINIGDMLERLTNNV 242 (312)
T ss_dssp HTTCCCEEEEEEE-CCCSSCCC--CEEEECCCSSEEEEECCTTSCEEEECTTSCEEECCCCSSCEEEEECHHHHHHTTTS
T ss_pred hcCCcceeeeEec-CCCCCCcCCcCccceecCceEEEEeEcCcCceEEECCCCcEEECCCCCCeEEEEhHHHHHHHhCCe
Confidence 9888889999776 556544344899999999999999999999999975 99999999999999
Q ss_pred ccccccccccCC----CCceEEEEEeecCCCCcEEecCccccCCCCCCCCC-CccC
Q 047242 167 FRSLEHWVVLRQ----SVNCLSLVFFWCFEEEKVILPSDEVVGEESMRLCK-PFVC 217 (217)
Q Consensus 167 ~ks~~HRV~~~~----~~~R~Si~~F~~p~~d~~i~p~~~~~~~~~~~~y~-~~~~ 217 (217)
||||.|||+.++ ..+|||++||++|+.|++|.|+++|+++++|++|+ ++++
T Consensus 243 ~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~ 298 (312)
T 3oox_A 243 LPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITA 298 (312)
T ss_dssp SCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEH
T ss_pred ecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeH
Confidence 999999998774 46799999999999999999999999999999999 9874
No 2
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=2.3e-57 Score=395.23 Aligned_cols=209 Identities=22% Similarity=0.314 Sum_probs=183.5
Q ss_pred CCCcEEeCCCCCC--------------CCc---cEEEEEccCCCHHHHHHHHHHHHHHhcCCHHHHhhcCCCC---CCCC
Q 047242 8 VELPILDISQPLQ--------------PSA---GFFLISNHGISRDLYRRLYMISRKLFDLAFDAKLELGPSS---STNT 67 (217)
Q Consensus 8 ~~iPvIDl~~~~~--------------~a~---Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~---~~~G 67 (217)
.+||||||+.+.. .|| |||||+||||+.++++++++.+++||+||.|+|+++.... ..+|
T Consensus 45 ~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~G 124 (356)
T 1gp6_A 45 PQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQG 124 (356)
T ss_dssp CCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSE
T ss_pred CCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccc
Confidence 4699999999853 234 9999999999999999999999999999999999997642 5789
Q ss_pred cccCCC-----CCcccccccc-------cCCCccccC------------------------------CCCchhhHHhhh-
Q 047242 68 YTPHFI-----ASPFFESLRV-------SGPNFFASA------------------------------NFENKYYESEFK- 104 (217)
Q Consensus 68 y~~~~~-----~~~~~e~~~~-------~~p~~~~~~------------------------------gl~~~~~~~~~~- 104 (217)
|..... ..+|+|.+.+ .+++.||.. |+++++|.+.+.
T Consensus 125 y~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~ 204 (356)
T 1gp6_A 125 YGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGG 204 (356)
T ss_dssp EECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTH
T ss_pred cCcCcccCCCCCCChhheeeeecCCccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcc
Confidence 986543 2479988754 256889863 899999998886
Q ss_pred --CCccceeeeecCCCCCCcccccccccccCCCeeEEEEeCCCCceeEEE---------------echhhHHHHHhCCcc
Q 047242 105 --NCHGYLRIINCSPPEALENEVEGLGMHTDMSCITIVYQDEIGGLQTTR---------------RNIGDMLQAWGNERF 167 (217)
Q Consensus 105 --~~~~~lrll~Y~p~~~~~~~~~g~~~HtD~~~lTlL~qd~~~GLqv~~---------------VniGd~l~~~snG~~ 167 (217)
.+.+.||+++| |+|+.++..+|+++|||+|+||||+||+++||||+. ||+||+||+||||+|
T Consensus 205 ~~~~~~~lrl~~Y-Pp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~ 283 (356)
T 1gp6_A 205 LEELLLQMKINYY-PKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKY 283 (356)
T ss_dssp HHHCEEEEEEEEE-CCCSSTTTCCSEEEECCCSSEEEEEECSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSS
T ss_pred cCCccceeeeeec-CCCCCcccccCcCCccCCCeEEEEEEcCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEe
Confidence 46778999555 678777778999999999999999999999999986 999999999999999
Q ss_pred cccccccccCCCCceEEEEEeecCCCCc-EEecCccccCCCCCCCCCCccC
Q 047242 168 RSLEHWVVLRQSVNCLSLVFFWCFEEEK-VILPSDEVVGEESMRLCKPFVC 217 (217)
Q Consensus 168 ks~~HRV~~~~~~~R~Si~~F~~p~~d~-~i~p~~~~~~~~~~~~y~~~~~ 217 (217)
|||.|||+.++..+|||++||++|+.|+ +|.|+++|+++++|++|+++++
T Consensus 284 kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~~~~~~~p~~y~~~t~ 334 (356)
T 1gp6_A 284 KSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTF 334 (356)
T ss_dssp CCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGCCSSSCCSSCCEEH
T ss_pred eccCceecCCCCCCEEEEEEeecCCCCCcEEeCChhhcCCCCCccCCCccH
Confidence 9999999998889999999999999999 9999999999999999999874
No 3
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=4.1e-57 Score=388.26 Aligned_cols=207 Identities=22% Similarity=0.387 Sum_probs=173.8
Q ss_pred CCCcEEeCCCCCC-----------CCc---cEEEEEccCCCHHHHHHHHHHHHHHhcCCHHHHhhcCCCCCCCCcccCCC
Q 047242 8 VELPILDISQPLQ-----------PSA---GFFLISNHGISRDLYRRLYMISRKLFDLAFDAKLELGPSSSTNTYTPHFI 73 (217)
Q Consensus 8 ~~iPvIDl~~~~~-----------~a~---Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~Gy~~~~~ 73 (217)
.+||||||+.+.. .|| |||||+||||+.++++++++.+++||+||.|+|+++... .+||.+...
T Consensus 2 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~--~~Gy~~~~~ 79 (319)
T 1w9y_A 2 ENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA--SKALEGVQA 79 (319)
T ss_dssp CCCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHTTCCC
T ss_pred CCCCEEECcccCcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC--CCCCCcccc
Confidence 4699999998742 245 999999999999999999999999999999999997532 247765432
Q ss_pred C---Cccccccccc-----CCCccccC------------------------------CCCchhhHHhhhC---Cccceee
Q 047242 74 A---SPFFESLRVS-----GPNFFASA------------------------------NFENKYYESEFKN---CHGYLRI 112 (217)
Q Consensus 74 ~---~~~~e~~~~~-----~p~~~~~~------------------------------gl~~~~~~~~~~~---~~~~lrl 112 (217)
+ .+|+|.+.+. .++.||+. |+++++|.+.+.. +.+.||+
T Consensus 80 e~~~~d~ke~~~~~~~p~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl 159 (319)
T 1w9y_A 80 EVTDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKV 159 (319)
T ss_dssp CGGGCCCCEEEEEEEESCCGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTCCEEEEEE
T ss_pred cCCCCChhhheeeecCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCCccceeEE
Confidence 2 4788887642 36789863 9999999988863 4567999
Q ss_pred eecCCCCCCcccccccccccCCCeeEEEEeC-CCCceeEEE---------------echhhHHHHHhCCccccccccccc
Q 047242 113 INCSPPEALENEVEGLGMHTDMSCITIVYQD-EIGGLQTTR---------------RNIGDMLQAWGNERFRSLEHWVVL 176 (217)
Q Consensus 113 l~Y~p~~~~~~~~~g~~~HtD~~~lTlL~qd-~~~GLqv~~---------------VniGd~l~~~snG~~ks~~HRV~~ 176 (217)
++| |+|+.++..+|+++|||+|+||||+|| +++||||+. ||+||+||+||||+||||.|||+.
T Consensus 160 ~~Y-Pp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~~kS~~HRVv~ 238 (319)
T 1w9y_A 160 SNY-PPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIA 238 (319)
T ss_dssp EEC-CCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECC
T ss_pred Eec-CCCcccccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHhCCeeecccceecC
Confidence 655 678877778999999999999999996 799999976 999999999999999999999999
Q ss_pred CCCCceEEEEEeecCCCCcEEecCccccCCC---CCCCCCCccC
Q 047242 177 RQSVNCLSLVFFWCFEEEKVILPSDEVVGEE---SMRLCKPFVC 217 (217)
Q Consensus 177 ~~~~~R~Si~~F~~p~~d~~i~p~~~~~~~~---~~~~y~~~~~ 217 (217)
++..+|||++||++|+.|++|.|+++|++++ +|++|+++++
T Consensus 239 ~~~~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~ 282 (319)
T 1w9y_A 239 QKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVF 282 (319)
T ss_dssp CSSSCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEH
T ss_pred CCCCCceEEEEEecCCCCCeEeCchhhcCcccccCccccCcEeH
Confidence 9889999999999999999999999999987 5999999874
No 4
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=2e-54 Score=373.40 Aligned_cols=205 Identities=21% Similarity=0.316 Sum_probs=175.8
Q ss_pred CCCCCCCcEEeCCCCCC--------------CCc---cEEEEEccCCCHHHHHHHHHHHHHH-hcCCHHHHhhcCCCCCC
Q 047242 4 SQTSVELPILDISQPLQ--------------PSA---GFFLISNHGISRDLYRRLYMISRKL-FDLAFDAKLELGPSSST 65 (217)
Q Consensus 4 ~~~~~~iPvIDl~~~~~--------------~a~---Gff~l~nhgi~~~~~~~~~~~~~~f-F~lp~e~K~~~~~~~~~ 65 (217)
|.+..+||||||+.+.. .|| |||||+|||| +++++++.+++| |+||.|+|+++..
T Consensus 3 s~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~---- 75 (331)
T 1odm_A 3 SVSKANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI---- 75 (331)
T ss_dssp CCCBCCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC----
T ss_pred cccCCCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh----
Confidence 34567899999998742 245 9999999999 999999999999 9999999999965
Q ss_pred CCcccCCC-------------CCccccccccc-----------------CCCcccc---C--------------------
Q 047242 66 NTYTPHFI-------------ASPFFESLRVS-----------------GPNFFAS---A-------------------- 92 (217)
Q Consensus 66 ~Gy~~~~~-------------~~~~~e~~~~~-----------------~p~~~~~---~-------------------- 92 (217)
+||.+.+. ..+|+|.+.+. ++|.||+ .
T Consensus 76 ~Gy~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ 155 (331)
T 1odm_A 76 RAYNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSA 155 (331)
T ss_dssp TTTCTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHH
Confidence 67765332 23788877542 4788985 2
Q ss_pred ---------CCCchhhHHhhhCCcccee--eeecC------C--CCCCccc-ccccccccCCCeeEEEEeCCCCceeEEE
Q 047242 93 ---------NFENKYYESEFKNCHGYLR--IINCS------P--PEALENE-VEGLGMHTDMSCITIVYQDEIGGLQTTR 152 (217)
Q Consensus 93 ---------gl~~~~~~~~~~~~~~~lr--ll~Y~------p--~~~~~~~-~~g~~~HtD~~~lTlL~qd~~~GLqv~~ 152 (217)
|+++++|.+.+..+.+.|| +++|+ | .|+.++. .+|+++|||+|+||||+||+++||||++
T Consensus 156 ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~ 235 (331)
T 1odm_A 156 LLKGYALALGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSNVQNLQVET 235 (331)
T ss_dssp HHHHHHHHTTSCTTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEECSSCCEEEEE
T ss_pred HHHHHHHHhCCCHHHHHHHhcCcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEeeCCCCCEEEEc
Confidence 8999999988887888999 98776 3 2766665 7899999999999999999999999994
Q ss_pred ---------------echhhHHHHHhCCcccccccccccCCCCceEEEEEeecCCCCcEEecCccccCCCCCCCCCCccC
Q 047242 153 ---------------RNIGDMLQAWGNERFRSLEHWVVLRQSVNCLSLVFFWCFEEEKVILPSDEVVGEESMRLCKPFVC 217 (217)
Q Consensus 153 ---------------VniGd~l~~~snG~~ks~~HRV~~~~~~~R~Si~~F~~p~~d~~i~p~~~~~~~~~~~~y~~~~~ 217 (217)
||+||+||+||||+||||.|||+.+ ..+|||++||++|+.|++|.|+++++++++ ++|+++++
T Consensus 236 ~~gWi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~-~~~R~Sia~F~~P~~d~~i~pl~~~~~~~~-~~y~~~t~ 313 (331)
T 1odm_A 236 AAGYQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKWV-NAERQSLPFFVNLGYDSVIDPFDPREPNGK-SDREPLSY 313 (331)
T ss_dssp TTEEEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEECC-CSCEEEEEEEECCCTTCBCCCCCTTSTTCC-CSSCCCBH
T ss_pred CCCeEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCCC-CCCEEEEEEEEcCCCCCEEeCCCccccccc-cCCCCccH
Confidence 9999999999999999999999865 689999999999999999999999999887 89999874
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=4.1e-54 Score=368.56 Aligned_cols=203 Identities=15% Similarity=0.141 Sum_probs=167.1
Q ss_pred CCCcEEeCCCCCC--------CCc---cEEEEEccCCCHHHHHHHHHHHHHHhcCC-HHHHhhcCCC--CCCCCcccCCC
Q 047242 8 VELPILDISQPLQ--------PSA---GFFLISNHGISRDLYRRLYMISRKLFDLA-FDAKLELGPS--SSTNTYTPHFI 73 (217)
Q Consensus 8 ~~iPvIDl~~~~~--------~a~---Gff~l~nhgi~~~~~~~~~~~~~~fF~lp-~e~K~~~~~~--~~~~Gy~~~~~ 73 (217)
.+||||||+.+.. .|| |||||+||||+.++++++++.+++||+|| .|+|+++... ...+||.+.+.
T Consensus 3 ~~iPvIDls~l~~~~~~~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~Gy~~~~~ 82 (311)
T 1dcs_A 3 TTVPTFSLAELQQGLHQDEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRGFTGLES 82 (311)
T ss_dssp CCCCEEEHHHHHTTCSHHHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSEEEEC--
T ss_pred CCCcEEEchhhcCCCHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCCceeeccc
Confidence 5799999987632 356 99999999999999999999999999999 9999999765 35789987543
Q ss_pred -----------CCccccccccc-CCCccccC-----------------------------CC----CchhhHHhhhCCcc
Q 047242 74 -----------ASPFFESLRVS-GPNFFASA-----------------------------NF----ENKYYESEFKNCHG 108 (217)
Q Consensus 74 -----------~~~~~e~~~~~-~p~~~~~~-----------------------------gl----~~~~~~~~~~~~~~ 108 (217)
..+|+|.+.+. .||.|| . |+ ++++|.+. .+
T Consensus 83 e~~~~~~~~~~~~d~~E~~~~~~~~n~wP-~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~f~~~----~~ 157 (311)
T 1dcs_A 83 ESTAQITNTGSYSDYSMCYSMGTADNLFP-SGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGGVEAFLDC----EP 157 (311)
T ss_dssp ---------------CEEEEECSSSCCCS-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTCHHHHHSC----CC
T ss_pred cccccccCCCCCCCcceeeeccCCCCCCC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCcHhHHhhc----ch
Confidence 23799988764 378898 3 88 66777643 67
Q ss_pred ceeeeecCCCCCCcc--c--ccccccccCCCeeEEEEeC-CCCc---eeEEE---------------echhhHHHHHhCC
Q 047242 109 YLRIINCSPPEALEN--E--VEGLGMHTDMSCITIVYQD-EIGG---LQTTR---------------RNIGDMLQAWGNE 165 (217)
Q Consensus 109 ~lrll~Y~p~~~~~~--~--~~g~~~HtD~~~lTlL~qd-~~~G---Lqv~~---------------VniGd~l~~~snG 165 (217)
.||+++| |+|+.++ + .+|+++|||+|+||||+|| +++| |||++ ||+||+||+||||
T Consensus 158 ~lrl~~Y-Pp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~~g~W~~V~p~pg~lvVNiGD~l~~~TnG 236 (311)
T 1dcs_A 158 LLRFRYF-PQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGGAFTDLPYRPDAVLVFCGAIATLVTGG 236 (311)
T ss_dssp EEEEEEE-CC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTS
T ss_pred hhheecC-CCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEeCCEEEeCcCCCCeEEEEHHHHHHHHhCC
Confidence 8999766 5675442 3 6789999999999999999 8999 99986 9999999999999
Q ss_pred cccccccccccCC-----CCceEEEEEeecCCCCcEEecCccccCCCCCCCC--CCccC
Q 047242 166 RFRSLEHWVVLRQ-----SVNCLSLVFFWCFEEEKVILPSDEVVGEESMRLC--KPFVC 217 (217)
Q Consensus 166 ~~ks~~HRV~~~~-----~~~R~Si~~F~~p~~d~~i~p~~~~~~~~~~~~y--~~~~~ 217 (217)
+||||.|||+.++ ..+|||++||++|+.|++|. +++++++++|++| +++++
T Consensus 237 ~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~d~~i~-l~~~~~~~~p~~y~~~~~t~ 294 (311)
T 1dcs_A 237 QVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS-VPLARECGFDVSLDGETATF 294 (311)
T ss_dssp CSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEE-HHHHHHTTCCCCCCSSEEEH
T ss_pred cccCCCceEeCCCcccCCCCCeEEEEEEEcCCCCcEEe-CCcccCCCCccccCCCCccH
Confidence 9999999999987 67899999999999999999 9999998999999 88864
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=6.2e-50 Score=338.00 Aligned_cols=190 Identities=25% Similarity=0.325 Sum_probs=149.5
Q ss_pred CCCcEEeCCCCC-----CCCc---cEEEEEccCCCHHHHHHHHHHHHHHhcCCHHHHhhcCCC-CCCCCcccCC-C----
Q 047242 8 VELPILDISQPL-----QPSA---GFFLISNHGISRDLYRRLYMISRKLFDLAFDAKLELGPS-SSTNTYTPHF-I---- 73 (217)
Q Consensus 8 ~~iPvIDl~~~~-----~~a~---Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~Gy~~~~-~---- 73 (217)
++||||||+... ..|| |||||+||||+.++++++++.+++||+| |+|+++... ...+||.+.. .
T Consensus 2 ~~IPvIDls~~~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~~~~~GY~~~~~~e~~~ 79 (280)
T 3on7_A 2 MKLETIDYRAADSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNRETHDGFFPASISETAK 79 (280)
T ss_dssp --CCEEETTSTTHHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCTTTCCEEECCC------
T ss_pred CCCCEEECCChhHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCCCCCCccccCccccccC
Confidence 479999999763 3466 9999999999999999999999999998 889998654 3579998654 1
Q ss_pred ---CCcccccccccCCCccccC-------------------------CCCch----h---hHHhhhCCc-cceeeeecCC
Q 047242 74 ---ASPFFESLRVSGPNFFASA-------------------------NFENK----Y---YESEFKNCH-GYLRIINCSP 117 (217)
Q Consensus 74 ---~~~~~e~~~~~~p~~~~~~-------------------------gl~~~----~---~~~~~~~~~-~~lrll~Y~p 117 (217)
..||+|.+.+.....+|.. +|..+ + |.+.+..+. +.||+++| |
T Consensus 80 ~~~~~D~kE~~~~~p~~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~~~~lr~~~Y-P 158 (280)
T 3on7_A 80 GHTVKDIKEYYHVYPWGRIPDSLRANILAYYEKANTLASELLEWIETYSPDEIKAKFSIPLPEMIANSHKTLLRILHY-P 158 (280)
T ss_dssp --CCCCSCEEEEECTTSCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTCSSCHHHHHTTCSSCEEEEEEE-C
T ss_pred CCCcccHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhHHHHHHhcCCccceEEEEEC-C
Confidence 2478888765311111110 44322 1 455555544 78999766 5
Q ss_pred CCCCcc--cccccccccCCCeeEEEEeCCCCceeEEE----------------echhhHHHHHhCCcccccccccccCC-
Q 047242 118 PEALEN--EVEGLGMHTDMSCITIVYQDEIGGLQTTR----------------RNIGDMLQAWGNERFRSLEHWVVLRQ- 178 (217)
Q Consensus 118 ~~~~~~--~~~g~~~HtD~~~lTlL~qd~~~GLqv~~----------------VniGd~l~~~snG~~ks~~HRV~~~~- 178 (217)
+|+.++ ..+|+++|||+|+||||+||+++||||++ ||+||+||+||||+||||.|||+.++
T Consensus 159 ~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~Tng~~kS~~HRVv~~~~ 238 (280)
T 3on7_A 159 PMTGDEEMGAIRAAAHEDINLITVLPTANEPGLQVKAKDGSWLDVPSDFGNIIINIGDMLQEASDGYFPSTSHRVINPEG 238 (280)
T ss_dssp CCCTTCCCCSEEEEEECCCSSEEEEECCSCCCEEEECTTSCEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEEECCTT
T ss_pred CCCCccccCcccccCCCCCCeEEEEEecCCCCeEEEcCCCCEEECcCCCCEEEEEcChHHHHHhCCcccCCCceEeCCCC
Confidence 565433 47899999999999999999999999985 99999999999999999999999874
Q ss_pred ---CCceEEEEEeecCCCCcEEecC
Q 047242 179 ---SVNCLSLVFFWCFEEEKVILPS 200 (217)
Q Consensus 179 ---~~~R~Si~~F~~p~~d~~i~p~ 200 (217)
..+|||++||++|+.|++|.|.
T Consensus 239 ~~~~~~R~Si~~F~~P~~d~~i~p~ 263 (280)
T 3on7_A 239 TDKTKSRISLPLFLHPHPSVVLSER 263 (280)
T ss_dssp CCTTSCEEECCEEECCCTTCBCSSS
T ss_pred CCCCCCeEEEEEEEcCCCCCEECCC
Confidence 4689999999999999999874
No 7
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=44.63 E-value=10 Score=33.30 Aligned_cols=45 Identities=18% Similarity=0.183 Sum_probs=35.2
Q ss_pred CCCCCCcEEeCCCCCCC----Cc-------cEEEEEccCCCHHHHHHHHHHHHHHhc
Q 047242 5 QTSVELPILDISQPLQP----SA-------GFFLISNHGISRDLYRRLYMISRKLFD 50 (217)
Q Consensus 5 ~~~~~iPvIDl~~~~~~----a~-------Gff~l~nhgi~~~~~~~~~~~~~~fF~ 50 (217)
..+.-||.||++++... +. |++.|.|. ||.+...+..+...+|.+
T Consensus 96 ~G~~~iP~i~f~di~~~~~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~ 151 (461)
T 2dbn_A 96 QGDAVWPVLSYADIKAGHVTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLD 151 (461)
T ss_dssp TTCCSSCEEEHHHHHHTCCCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHH
T ss_pred cCCCCcceecHHHhcCCCCCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHH
Confidence 34568999999886432 21 99999998 999988888888888854
No 8
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=36.47 E-value=20 Score=27.92 Aligned_cols=24 Identities=25% Similarity=0.414 Sum_probs=17.6
Q ss_pred cccccccCCC-CceEEEEEeecCCC
Q 047242 170 LEHWVVLRQS-VNCLSLVFFWCFEE 193 (217)
Q Consensus 170 ~~HRV~~~~~-~~R~Si~~F~~p~~ 193 (217)
.+|+|..... .+|+||+|-+.+..
T Consensus 185 l~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 185 LRHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp SCEEECCCCSSSCEEEEEEEEEC--
T ss_pred CEEeccCCCCCCCEEEEEEEeecCC
Confidence 3688887654 68999999887754
No 9
>2vf9_A Coat protein; virion, RNA-binding, capsid protein, structural protein, virus; 3.50A {Bacteriophage PRR1}
Probab=27.94 E-value=12 Score=25.41 Aligned_cols=16 Identities=31% Similarity=0.304 Sum_probs=13.4
Q ss_pred HHhCCccccccccccc
Q 047242 161 AWGNERFRSLEHWVVL 176 (217)
Q Consensus 161 ~~snG~~ks~~HRV~~ 176 (217)
.-|||+||||+.-|+.
T Consensus 51 ktsngrykstlklvvp 66 (131)
T 2vf9_A 51 KTSNGRYKSTLKLVVP 66 (131)
T ss_dssp ECTTSEEEEEEEEEEE
T ss_pred ecCCCceeeeEEEEEE
Confidence 5689999999987754
No 10
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=27.85 E-value=23 Score=28.28 Aligned_cols=69 Identities=16% Similarity=0.066 Sum_probs=41.3
Q ss_pred eeeeecCCCCCCcccccccccccCCC-----------eeEEEEe--C----CCCceeEEE--------echhhHHHHHhC
Q 047242 110 LRIINCSPPEALENEVEGLGMHTDMS-----------CITIVYQ--D----EIGGLQTTR--------RNIGDMLQAWGN 164 (217)
Q Consensus 110 lrll~Y~p~~~~~~~~~g~~~HtD~~-----------~lTlL~q--d----~~~GLqv~~--------VniGd~l~~~sn 164 (217)
+++++|.+-. -..+|.|.. .+|+++. + +.|.|.+.. -..|+++-..+
T Consensus 101 ~~~~rY~~G~-------~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~~~~V~P~~G~~v~F~s- 172 (243)
T 3dkq_A 101 PLFNRYQGGE-------TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYGQQSIKLSAGSLVLYPS- 172 (243)
T ss_dssp EEEEEECTTC-------EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTEEEEECCCTTCEEEEET-
T ss_pred ceEEEECCCC-------eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCCcEEEecCCCEEEEECC-
Confidence 6787885421 255666653 4555554 3 124455543 34466554433
Q ss_pred CcccccccccccCCCCceEEEEEeec
Q 047242 165 ERFRSLEHWVVLRQSVNCLSLVFFWC 190 (217)
Q Consensus 165 G~~ks~~HRV~~~~~~~R~Si~~F~~ 190 (217)
.++|+|.......|++++.+++
T Consensus 173 ----~~lH~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 173 ----SSLHQVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp ----TSEEEECCEEEECEEEEEEEEE
T ss_pred ----CCeEcCccccccCEEEEEEehh
Confidence 3689997766679999998875
Done!