Query 047243
Match_columns 75
No_of_seqs 138 out of 1050
Neff 7.0
Searched_HMMs 46136
Date Fri Mar 29 09:09:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047243.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/047243hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03156 GDSL esterase/lipase; 99.8 3.2E-20 6.9E-25 132.1 4.7 58 2-59 284-346 (351)
2 cd01837 SGNH_plant_lipase_like 99.8 6E-20 1.3E-24 127.6 5.1 57 2-58 253-314 (315)
3 cd01847 Triacylglycerol_lipase 99.8 2.7E-19 5.8E-24 122.6 4.1 56 2-57 222-279 (281)
4 cd01846 fatty_acyltransferase_ 99.7 1.9E-17 4.1E-22 112.1 4.0 53 2-57 216-269 (270)
5 PRK15381 pathogenicity island 99.5 6.5E-15 1.4E-19 107.2 3.7 50 2-55 344-397 (408)
6 COG3240 Phospholipase/lecithin 99.4 5.1E-13 1.1E-17 96.1 3.7 64 2-69 273-339 (370)
7 PF00657 Lipase_GDSL: GDSL-lik 98.1 1E-06 2.3E-11 56.8 1.3 22 34-55 212-234 (234)
8 cd00229 SGNH_hydrolase SGNH_hy 97.1 0.00032 7E-09 42.4 2.1 25 33-57 161-186 (187)
9 cd01834 SGNH_hydrolase_like_2 96.4 0.0031 6.7E-08 39.8 2.5 24 34-57 166-190 (191)
10 cd01833 XynB_like SGNH_hydrola 96.2 0.0033 7.2E-08 39.0 2.1 24 35-58 132-156 (157)
11 cd01830 XynE_like SGNH_hydrola 95.8 0.0051 1.1E-07 40.1 1.4 22 34-55 178-200 (204)
12 cd01828 sialate_O-acetylestera 95.7 0.0074 1.6E-07 37.9 2.1 24 34-57 142-166 (169)
13 cd01844 SGNH_hydrolase_like_6 95.7 0.0076 1.6E-07 38.4 1.9 22 36-57 153-175 (177)
14 cd01841 NnaC_like NnaC (CMP-Ne 95.6 0.01 2.2E-07 37.4 2.2 23 35-57 149-172 (174)
15 cd04502 SGNH_hydrolase_like_7 95.5 0.0097 2.1E-07 37.5 1.9 23 35-57 146-169 (171)
16 cd01824 Phospholipase_B_like P 95.4 0.01 2.2E-07 41.6 2.0 24 35-58 258-282 (288)
17 cd01840 SGNH_hydrolase_yrhL_li 95.4 0.011 2.3E-07 37.0 1.9 24 34-57 124-148 (150)
18 PRK10528 multifunctional acyl- 95.3 0.012 2.7E-07 38.2 1.9 25 34-58 157-182 (191)
19 cd01839 SGNH_arylesterase_like 95.2 0.014 3E-07 38.0 1.9 22 37-58 182-204 (208)
20 cd01829 SGNH_hydrolase_peri2 S 95.1 0.013 2.8E-07 37.6 1.6 24 35-58 173-197 (200)
21 cd01822 Lysophospholipase_L1_l 95.0 0.018 3.8E-07 36.1 2.1 25 34-58 150-175 (177)
22 cd04506 SGNH_hydrolase_YpmR_li 95.0 0.019 4.2E-07 37.0 2.3 24 34-57 179-203 (204)
23 cd04501 SGNH_hydrolase_like_4 94.9 0.023 4.9E-07 36.0 2.4 24 34-57 157-181 (183)
24 cd01838 Isoamyl_acetate_hydrol 94.8 0.018 3.9E-07 36.4 1.7 23 35-57 174-197 (199)
25 cd01835 SGNH_hydrolase_like_3 94.8 0.022 4.8E-07 36.4 2.0 23 35-57 168-191 (193)
26 PF13472 Lipase_GDSL_2: GDSL-l 94.7 0.015 3.4E-07 35.4 1.1 19 34-52 161-179 (179)
27 cd01836 FeeA_FeeB_like SGNH_hy 94.6 0.025 5.5E-07 36.0 2.0 25 34-58 163-188 (191)
28 cd01832 SGNH_hydrolase_like_1 94.5 0.027 5.9E-07 35.6 2.0 23 35-57 161-184 (185)
29 cd01820 PAF_acetylesterase_lik 94.5 0.024 5.3E-07 37.2 1.7 24 35-58 185-209 (214)
30 cd01831 Endoglucanase_E_like E 94.4 0.029 6.2E-07 35.4 2.0 22 37-58 145-167 (169)
31 cd01825 SGNH_hydrolase_peri1 S 94.4 0.024 5.3E-07 35.8 1.5 25 34-58 159-184 (189)
32 cd01821 Rhamnogalacturan_acety 94.3 0.032 7E-07 35.9 2.0 22 36-57 174-196 (198)
33 cd01827 sialate_O-acetylestera 94.0 0.041 8.9E-07 34.9 2.1 23 36-58 163-186 (188)
34 cd01826 acyloxyacyl_hydrolase_ 93.5 0.051 1.1E-06 38.9 1.9 23 35-57 280-304 (305)
35 cd01823 SEST_like SEST_like. A 92.5 0.095 2.1E-06 35.0 2.1 21 37-57 237-258 (259)
36 COG2755 TesA Lysophospholipase 91.9 0.13 2.9E-06 33.3 2.1 25 34-58 182-207 (216)
37 KOG3035 Isoamyl acetate-hydrol 89.5 0.096 2.1E-06 36.3 -0.2 26 32-57 180-206 (245)
38 cd01842 SGNH_hydrolase_like_5 77.1 2.1 4.6E-05 28.7 2.1 25 33-57 155-180 (183)
39 PF14606 Lipase_GDSL_3: GDSL-l 70.0 1.5 3.1E-05 29.2 0.0 22 35-56 152-174 (178)
40 PF06812 ImpA-rel_N: ImpA-rela 61.7 2.9 6.4E-05 22.7 0.2 8 38-45 53-60 (62)
41 PF11691 DUF3288: Protein of u 50.2 15 0.00032 22.0 1.9 31 40-74 2-33 (90)
42 PF04914 DltD_C: DltD C-termin 44.3 19 0.00041 22.6 1.8 24 33-56 100-124 (130)
43 KOG3670 Phospholipase [Lipid t 41.7 20 0.00044 26.8 1.9 27 33-59 323-350 (397)
44 PF13259 DUF4050: Protein of u 35.1 43 0.00092 20.6 2.4 30 44-74 80-109 (122)
45 TIGR03363 VI_chp_8 type VI sec 31.5 16 0.00035 26.3 0.0 8 38-45 105-112 (353)
46 KOG1193 Arginyl-tRNA-protein t 30.1 26 0.00057 26.8 1.0 8 34-41 332-339 (511)
47 PF05845 PhnH: Bacterial phosp 29.8 43 0.00092 22.4 1.8 19 38-56 5-24 (192)
48 PF05326 SVA: Seminal vesicle 28.1 25 0.00054 22.2 0.5 13 29-41 88-100 (124)
49 cd02171 G3P_Cytidylyltransfera 26.8 71 0.0015 19.1 2.4 17 38-57 9-26 (129)
50 COG4518 Mu-like prophage FluMu 26.5 1E+02 0.0022 19.3 2.9 31 43-75 54-85 (122)
51 PF03444 HrcA_DNA-bdg: Winged 26.4 45 0.00097 19.4 1.3 12 41-52 62-73 (78)
52 TIGR00809 secB protein-export 25.4 1E+02 0.0022 19.8 2.9 26 48-73 106-133 (140)
53 PF11599 AviRa: RRNA methyltra 25.3 26 0.00056 24.6 0.2 9 11-19 56-64 (246)
54 TIGR00083 ribF riboflavin kina 25.0 66 0.0014 22.7 2.2 17 38-57 6-23 (288)
55 PRK13031 preprotein translocas 24.6 99 0.0021 20.1 2.8 27 47-73 108-136 (149)
56 PF08885 GSCFA: GSCFA family; 24.4 43 0.00093 23.3 1.1 24 31-54 224-250 (251)
57 PRK00109 Holliday junction res 23.1 91 0.002 19.5 2.4 21 34-54 90-111 (138)
58 PF04921 XAP5: XAP5, circadian 22.5 40 0.00087 23.5 0.7 8 35-42 102-109 (239)
59 PF04915 DltD_N: DltD N-termin 21.3 72 0.0016 17.7 1.4 17 34-50 37-53 (62)
60 COG5601 CDC36 General negative 20.8 47 0.001 21.9 0.7 17 31-47 144-160 (172)
61 PF11124 Pho86: Inorganic phos 20.7 73 0.0016 23.1 1.7 36 30-70 43-79 (304)
62 TIGR00250 RNAse_H_YqgF RNAse H 20.7 1.1E+02 0.0023 18.9 2.3 21 34-54 84-105 (130)
63 COG2845 Uncharacterized protei 20.4 75 0.0016 23.5 1.8 24 34-57 291-315 (354)
No 1
>PLN03156 GDSL esterase/lipase; Provisional
Probab=99.80 E-value=3.2e-20 Score=132.12 Aligned_cols=58 Identities=26% Similarity=0.475 Sum_probs=49.9
Q ss_pred ccCCCCcccCccccccccc---CCCcccc-cccccCCcceeeCCCChhHHHHHHH-HHHHhcC
Q 047243 2 HAMAGFKVIDAPCCKTVGN---LTSTPFR-SARKNRNEYRFWDEFHTTEAMNRFG-QRALNAA 59 (75)
Q Consensus 2 P~~yGf~~~~~aCCg~g~~---~~~~~~~-~~C~~~~~y~FWD~~HpTe~a~~~i-~~~~~~~ 59 (75)
|++|||++++++|||.|.+ ..|.... .+|+||++|+|||++||||++|++| +.++++.
T Consensus 284 P~~yGf~~~~~aCCg~g~~~~~~~C~~~~~~~C~~p~~yvfWD~~HPTe~a~~~iA~~~~~~l 346 (351)
T PLN03156 284 PSAYGFEVTSVACCATGMFEMGYLCNRNNPFTCSDADKYVFWDSFHPTEKTNQIIANHVVKTL 346 (351)
T ss_pred ccccCcccCCccccCCCCCCCccccCCCCCCccCCccceEEecCCCchHHHHHHHHHHHHHHH
Confidence 8899999999999998754 2465433 4699999999999999999999999 9999864
No 2
>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=99.80 E-value=6e-20 Score=127.63 Aligned_cols=57 Identities=35% Similarity=0.579 Sum_probs=48.5
Q ss_pred ccCCCCcccCccccccccc---CCCccc-ccccccCCcceeeCCCChhHHHHHHH-HHHHhc
Q 047243 2 HAMAGFKVIDAPCCKTVGN---LTSTPF-RSARKNRNEYRFWDEFHTTEAMNRFG-QRALNA 58 (75)
Q Consensus 2 P~~yGf~~~~~aCCg~g~~---~~~~~~-~~~C~~~~~y~FWD~~HpTe~a~~~i-~~~~~~ 58 (75)
|++|||++++++||+.|.. ..|... ..+|.||++|+|||++||||++|++| +.+++|
T Consensus 253 p~~yGf~~~~~aCc~~g~~~~~~~c~~~~~~~C~~p~~y~fwD~~HpT~~~~~~ia~~~~~g 314 (315)
T cd01837 253 PAKYGFENTLKACCGTGGPEGGLLCNPCGSTVCPDPSKYVFWDGVHPTEAANRIIADALLSG 314 (315)
T ss_pred hhhcCCcCCCcCccCCCCCCcccccCCCCCCcCCCccceEEeCCCChHHHHHHHHHHHHhcC
Confidence 7899999999999998753 234322 35799999999999999999999999 999987
No 3
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Members of this subfamily might hydrolyze triacylglycerol into diacylglycerol and fatty acid anions.
Probab=99.77 E-value=2.7e-19 Score=122.61 Aligned_cols=56 Identities=27% Similarity=0.356 Sum_probs=45.7
Q ss_pred ccCCCCcccCcccccccccCCCc-ccccccccCCcceeeCCCChhHHHHHHH-HHHHh
Q 047243 2 HAMAGFKVIDAPCCKTVGNLTST-PFRSARKNRNEYRFWDEFHTTEAMNRFG-QRALN 57 (75)
Q Consensus 2 P~~yGf~~~~~aCCg~g~~~~~~-~~~~~C~~~~~y~FWD~~HpTe~a~~~i-~~~~~ 57 (75)
|++|||++++++||+.+....|. ....+|.+|++|+|||++||||++|++| +.+++
T Consensus 222 P~~yGf~~~~~~CC~~~~~~~~~~~~~~~c~~~~~y~fwD~~HpTe~~~~~ia~~~~~ 279 (281)
T cd01847 222 PAAYGFTNTTTPACTSTSAAGSGAATLVTAAAQSTYLFADDVHPTPAGHKLIAQYALS 279 (281)
T ss_pred hHhcCccCCCccccCCCCccccccccccCCCCccceeeccCCCCCHHHHHHHHHHHHH
Confidence 78999999999999865421222 1124599999999999999999999999 98876
No 4
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols.
Probab=99.69 E-value=1.9e-17 Score=112.09 Aligned_cols=53 Identities=34% Similarity=0.534 Sum_probs=45.6
Q ss_pred ccCCCCcccCcccccccccCCCcccccccccCCcceeeCCCChhHHHHHHH-HHHHh
Q 047243 2 HAMAGFKVIDAPCCKTVGNLTSTPFRSARKNRNEYRFWDEFHTTEAMNRFG-QRALN 57 (75)
Q Consensus 2 P~~yGf~~~~~aCCg~g~~~~~~~~~~~C~~~~~y~FWD~~HpTe~a~~~i-~~~~~ 57 (75)
|++|||+++..+||+.+. |.....+|.+|++|+|||++||||++|+++ +.+++
T Consensus 216 p~~yGf~~~~~~C~~~~~---~~~~~~~c~~~~~y~fwD~~HpT~~~~~~iA~~~~~ 269 (270)
T cd01846 216 PAAYGFTNVTDPCLDYVY---SYSPREACANPDKYLFWDEVHPTTAVHQLIAEEVAA 269 (270)
T ss_pred HHhcCCCcCcchhcCCCc---cccccCCCCCccceEEecCCCccHHHHHHHHHHHHh
Confidence 789999999999998642 433345699999999999999999999999 88875
No 5
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional
Probab=99.52 E-value=6.5e-15 Score=107.17 Aligned_cols=50 Identities=14% Similarity=0.075 Sum_probs=40.5
Q ss_pred ccCCCCcccCccccccccc---CCCcccccccccCCcceeeCCCChhHHHHHHH-HHH
Q 047243 2 HAMAGFKVIDAPCCKTVGN---LTSTPFRSARKNRNEYRFWDEFHTTEAMNRFG-QRA 55 (75)
Q Consensus 2 P~~yGf~~~~~aCCg~g~~---~~~~~~~~~C~~~~~y~FWD~~HpTe~a~~~i-~~~ 55 (75)
|++|||++++. ||+.|.. ..|.+...+|+ +|+|||.+||||++|+++ ..+
T Consensus 344 P~~yGF~~~~~-cCg~G~~~~~~~C~p~~~~C~---~YvFWD~vHPTe~ah~iiA~~~ 397 (408)
T PRK15381 344 ASNIGYDTENP-YTHHGYVHVPGAKDPQLDICP---QYVFNDLVHPTQEVHHCFAIML 397 (408)
T ss_pred HHhcCCCcccc-ccCCCccCCccccCcccCCCC---ceEecCCCCChHHHHHHHHHHH
Confidence 78999999987 9998753 23555445684 999999999999999999 654
No 6
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=99.36 E-value=5.1e-13 Score=96.06 Aligned_cols=64 Identities=23% Similarity=0.306 Sum_probs=48.0
Q ss_pred ccCCCCcccCccccccccc-CCCcccc-cccccCCcceeeCCCChhHHHHHHH-HHHHhcCCCCCccccCh
Q 047243 2 HAMAGFKVIDAPCCKTVGN-LTSTPFR-SARKNRNEYRFWDEFHTTEAMNRFG-QRALNAAHPSDAYPFDI 69 (75)
Q Consensus 2 P~~yGf~~~~~aCCg~g~~-~~~~~~~-~~C~~~~~y~FWD~~HpTe~a~~~i-~~~~~~~~~~~~~P~n~ 69 (75)
|+.|||+|++..||..... +.|.... ..|..|++|+|||++|||.++|++| +.++.- ...|...
T Consensus 273 Pa~fGlant~~~~c~~~~~~~~~~a~~p~~~~~~~~ylFaD~vHPTt~~H~liAeyila~----l~ap~~~ 339 (370)
T COG3240 273 PAEFGLANTTAPACDATVSNPACSASLPALCAAPQKYLFADSVHPTTAVHHLIAEYILAR----LAAPFSL 339 (370)
T ss_pred HHhcCcccCCCcccCcccCCcccccccccccCCccceeeecccCCchHHHHHHHHHHHHH----HhCcchh
Confidence 7899999999999976532 2233222 2366677899999999999999999 999975 3455443
No 7
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified []. Members of this entry include; Aeromonas hydrophila lipase, Vibrio mimicus arylesterase, Vibrio parahaemolyticus thermolabile haemolysin, rabbit phospholipase (AdRab-B), and Brassica napus anter-specific proline-rich protein.; GO: 0016788 hydrolase activity, acting on ester bonds, 0006629 lipid metabolic process; PDB: 2WAO_A 2WAB_A 1V2G_A 1U8U_A 1JRL_A 1IVN_A 1J00_A 1DEO_A 1K7C_A 1PP4_A ....
Probab=98.11 E-value=1e-06 Score=56.85 Aligned_cols=22 Identities=32% Similarity=0.644 Sum_probs=18.8
Q ss_pred CcceeeCCCChhHHHHHHH-HHH
Q 047243 34 NEYRFWDEFHTTEAMNRFG-QRA 55 (75)
Q Consensus 34 ~~y~FWD~~HpTe~a~~~i-~~~ 55 (75)
++|+|||++|||+++|+++ +.+
T Consensus 212 ~~~~~~D~~Hpt~~g~~~iA~~i 234 (234)
T PF00657_consen 212 DKYMFWDGVHPTEKGHKIIAEYI 234 (234)
T ss_dssp HHCBBSSSSSB-HHHHHHHHHHH
T ss_pred ceeccCCCcCCCHHHHHHHHcCC
Confidence 4799999999999999999 764
No 8
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=97.12 E-value=0.00032 Score=42.40 Aligned_cols=25 Identities=12% Similarity=0.029 Sum_probs=22.1
Q ss_pred CCcceeeCCCChhHHHHHHH-HHHHh
Q 047243 33 RNEYRFWDEFHTTEAMNRFG-QRALN 57 (75)
Q Consensus 33 ~~~y~FWD~~HpTe~a~~~i-~~~~~ 57 (75)
+..+..||++|||+++|+++ +.+++
T Consensus 161 ~~~~~~~Dg~H~~~~G~~~~a~~i~~ 186 (187)
T cd00229 161 DKSLYSPDGIHPNPAGHKLIAEALAS 186 (187)
T ss_pred ccccccCCCCCCchhhHHHHHHHHhc
Confidence 36889999999999999999 87764
No 9
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=96.37 E-value=0.0031 Score=39.76 Aligned_cols=24 Identities=25% Similarity=0.081 Sum_probs=21.6
Q ss_pred CcceeeCCCChhHHHHHHH-HHHHh
Q 047243 34 NEYRFWDEFHTTEAMNRFG-QRALN 57 (75)
Q Consensus 34 ~~y~FWD~~HpTe~a~~~i-~~~~~ 57 (75)
..++++|++||++++|+++ +.+..
T Consensus 166 ~~~~~~D~~Hpn~~G~~~~a~~~~~ 190 (191)
T cd01834 166 EAVLTVDGVHPNEAGHRALARLWLE 190 (191)
T ss_pred CccccCCCCCCCHHHHHHHHHHHHh
Confidence 5788999999999999999 88765
No 10
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=96.25 E-value=0.0033 Score=38.99 Aligned_cols=24 Identities=13% Similarity=0.127 Sum_probs=21.2
Q ss_pred cceeeCCCChhHHHHHHH-HHHHhc
Q 047243 35 EYRFWDEFHTTEAMNRFG-QRALNA 58 (75)
Q Consensus 35 ~y~FWD~~HpTe~a~~~i-~~~~~~ 58 (75)
+++.+|++||++++|+.+ +.++..
T Consensus 132 ~~~~~Dg~Hpn~~Gy~~~a~~~~~~ 156 (157)
T cd01833 132 ADDLYDGLHPNDQGYKKMADAWYEA 156 (157)
T ss_pred cccccCCCCCchHHHHHHHHHHHhh
Confidence 578899999999999999 888764
No 11
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=95.77 E-value=0.0051 Score=40.12 Aligned_cols=22 Identities=18% Similarity=0.150 Sum_probs=18.8
Q ss_pred CcceeeCCCChhHHHHHHH-HHH
Q 047243 34 NEYRFWDEFHTTEAMNRFG-QRA 55 (75)
Q Consensus 34 ~~y~FWD~~HpTe~a~~~i-~~~ 55 (75)
.+|+.+|++||++++|+++ +.+
T Consensus 178 ~~~~~~DGvHpn~~Gy~~~A~~i 200 (204)
T cd01830 178 PAYDSGDHLHPNDAGYQAMADAV 200 (204)
T ss_pred cccCCCCCCCCCHHHHHHHHHhc
Confidence 3577789999999999999 755
No 12
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=95.75 E-value=0.0074 Score=37.90 Aligned_cols=24 Identities=8% Similarity=-0.179 Sum_probs=21.1
Q ss_pred CcceeeCCCChhHHHHHHH-HHHHh
Q 047243 34 NEYRFWDEFHTTEAMNRFG-QRALN 57 (75)
Q Consensus 34 ~~y~FWD~~HpTe~a~~~i-~~~~~ 57 (75)
.+++..|++||++++|+++ +.+..
T Consensus 142 ~~~~~~DgiHpn~~G~~~~a~~i~~ 166 (169)
T cd01828 142 KNEFTTDGLHLNAKGYAVWAAALQP 166 (169)
T ss_pred chhhccCccccCHHHHHHHHHHHHH
Confidence 4678899999999999999 88765
No 13
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=95.65 E-value=0.0076 Score=38.39 Aligned_cols=22 Identities=18% Similarity=-0.005 Sum_probs=18.6
Q ss_pred ceeeCCCChhHHHHHHH-HHHHh
Q 047243 36 YRFWDEFHTTEAMNRFG-QRALN 57 (75)
Q Consensus 36 y~FWD~~HpTe~a~~~i-~~~~~ 57 (75)
-++-|++|||+++|+++ +.+..
T Consensus 153 ~~~~DglHpn~~Gy~~~a~~l~~ 175 (177)
T cd01844 153 EALVDGIHPTDLGHMRYADRFEP 175 (177)
T ss_pred CCCCCCCCCCHHHHHHHHHHHhh
Confidence 35679999999999999 87764
No 14
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=95.58 E-value=0.01 Score=37.39 Aligned_cols=23 Identities=9% Similarity=-0.208 Sum_probs=19.4
Q ss_pred cceeeCCCChhHHHHHHH-HHHHh
Q 047243 35 EYRFWDEFHTTEAMNRFG-QRALN 57 (75)
Q Consensus 35 ~y~FWD~~HpTe~a~~~i-~~~~~ 57 (75)
+.+..|++||++++|+++ +.+.+
T Consensus 149 ~~~~~DglH~n~~Gy~~~a~~l~~ 172 (174)
T cd01841 149 KEYTTDGLHFNPKGYQKLLEILEE 172 (174)
T ss_pred ccccCCCcccCHHHHHHHHHHHHh
Confidence 367789999999999999 87653
No 15
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=95.47 E-value=0.0097 Score=37.49 Aligned_cols=23 Identities=17% Similarity=-0.028 Sum_probs=19.6
Q ss_pred cceeeCCCChhHHHHHHH-HHHHh
Q 047243 35 EYRFWDEFHTTEAMNRFG-QRALN 57 (75)
Q Consensus 35 ~y~FWD~~HpTe~a~~~i-~~~~~ 57 (75)
+++..|++||++++|+++ +.+..
T Consensus 146 ~~~~~DGlH~n~~Gy~~~a~~l~~ 169 (171)
T cd04502 146 ELFQEDGLHLNDAGYALWRKVIKP 169 (171)
T ss_pred hhcCCCCCCCCHHHHHHHHHHHHh
Confidence 566789999999999999 87653
No 16
>cd01824 Phospholipase_B_like Phospholipase-B_like. This subgroup of the SGNH-family of lipolytic enzymes may have both esterase and phospholipase-A/lysophospholipase activity. It's members may be involved in the conversion of phosphatidylcholine to fatty acids and glycerophosphocholine, perhaps in the context of dietary lipid uptake. Members may be membrane proteins. The tertiary fold of the SGNH-hydrolases is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; Its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases.
Probab=95.44 E-value=0.01 Score=41.63 Aligned_cols=24 Identities=17% Similarity=0.137 Sum_probs=22.2
Q ss_pred cceeeCCCChhHHHHHHH-HHHHhc
Q 047243 35 EYRFWDEFHTTEAMNRFG-QRALNA 58 (75)
Q Consensus 35 ~y~FWD~~HpTe~a~~~i-~~~~~~ 58 (75)
+++-||++||++++|.++ +.+|+.
T Consensus 258 ~~~~~D~~Hps~~G~~~ia~~lwn~ 282 (288)
T cd01824 258 SFFSPDCFHFSQRGHAIAANALWNN 282 (288)
T ss_pred hhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 678899999999999999 999985
No 17
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=95.39 E-value=0.011 Score=37.03 Aligned_cols=24 Identities=13% Similarity=0.135 Sum_probs=20.3
Q ss_pred CcceeeCCCChhHHHHHHH-HHHHh
Q 047243 34 NEYRFWDEFHTTEAMNRFG-QRALN 57 (75)
Q Consensus 34 ~~y~FWD~~HpTe~a~~~i-~~~~~ 57 (75)
.+++.-|++||++++|+++ +.+..
T Consensus 124 ~~~~~~DgiHpn~~G~~~~a~~i~~ 148 (150)
T cd01840 124 PDWFYGDGVHPNPAGAKLYAALIAK 148 (150)
T ss_pred chhhcCCCCCCChhhHHHHHHHHHH
Confidence 4566779999999999999 87765
No 18
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional
Probab=95.25 E-value=0.012 Score=38.23 Aligned_cols=25 Identities=12% Similarity=0.090 Sum_probs=21.0
Q ss_pred CcceeeCCCChhHHHHHHH-HHHHhc
Q 047243 34 NEYRFWDEFHTTEAMNRFG-QRALNA 58 (75)
Q Consensus 34 ~~y~FWD~~HpTe~a~~~i-~~~~~~ 58 (75)
.+++..|++||++++|+++ +.+...
T Consensus 157 ~~~~~~DGiHpn~~Gy~~~A~~i~~~ 182 (191)
T PRK10528 157 PQWMQDDGIHPNRDAQPFIADWMAKQ 182 (191)
T ss_pred HhhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 4567789999999999999 887764
No 19
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A. tumefaciens. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=95.15 E-value=0.014 Score=37.96 Aligned_cols=22 Identities=14% Similarity=-0.067 Sum_probs=18.8
Q ss_pred eeeCCCChhHHHHHHH-HHHHhc
Q 047243 37 RFWDEFHTTEAMNRFG-QRALNA 58 (75)
Q Consensus 37 ~FWD~~HpTe~a~~~i-~~~~~~ 58 (75)
.+.|++|||+++|+++ +.++..
T Consensus 182 ~~~DGvH~~~~G~~~~a~~l~~~ 204 (208)
T cd01839 182 SPVDGVHLDADQHAALGQALASV 204 (208)
T ss_pred CCCCccCcCHHHHHHHHHHHHHH
Confidence 4579999999999999 888753
No 20
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=95.11 E-value=0.013 Score=37.60 Aligned_cols=24 Identities=25% Similarity=-0.007 Sum_probs=19.8
Q ss_pred cceeeCCCChhHHHHHHH-HHHHhc
Q 047243 35 EYRFWDEFHTTEAMNRFG-QRALNA 58 (75)
Q Consensus 35 ~y~FWD~~HpTe~a~~~i-~~~~~~ 58 (75)
.+...|++|||+++|+++ +.++..
T Consensus 173 ~~~~~DgvH~~~~G~~~~a~~i~~~ 197 (200)
T cd01829 173 RLRTNDGIHFTAAGGRKLAFYVEKL 197 (200)
T ss_pred EeecCCCceECHHHHHHHHHHHHHH
Confidence 445569999999999999 887753
No 21
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=95.04 E-value=0.018 Score=36.06 Aligned_cols=25 Identities=16% Similarity=0.033 Sum_probs=20.6
Q ss_pred CcceeeCCCChhHHHHHHH-HHHHhc
Q 047243 34 NEYRFWDEFHTTEAMNRFG-QRALNA 58 (75)
Q Consensus 34 ~~y~FWD~~HpTe~a~~~i-~~~~~~ 58 (75)
.+++.=|++||++++|+++ +.+...
T Consensus 150 ~~~~~~DgvHpn~~G~~~~a~~i~~~ 175 (177)
T cd01822 150 PELMQSDGIHPNAEGQPIIAENVWPA 175 (177)
T ss_pred hhhhCCCCCCcCHHHHHHHHHHHHHh
Confidence 3456679999999999999 887753
No 22
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=95.00 E-value=0.019 Score=37.01 Aligned_cols=24 Identities=17% Similarity=0.196 Sum_probs=20.3
Q ss_pred CcceeeCCCChhHHHHHHH-HHHHh
Q 047243 34 NEYRFWDEFHTTEAMNRFG-QRALN 57 (75)
Q Consensus 34 ~~y~FWD~~HpTe~a~~~i-~~~~~ 57 (75)
...+..|++||++++|+++ +.++.
T Consensus 179 ~~~~~~Dg~Hpn~~G~~~~a~~l~~ 203 (204)
T cd04506 179 KYLLTSDHFHPNDKGYQLIADRVFK 203 (204)
T ss_pred cccccccCcCCCHHHHHHHHHHHHh
Confidence 4566779999999999999 88765
No 23
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=94.92 E-value=0.023 Score=36.02 Aligned_cols=24 Identities=17% Similarity=0.015 Sum_probs=20.3
Q ss_pred CcceeeCCCChhHHHHHHH-HHHHh
Q 047243 34 NEYRFWDEFHTTEAMNRFG-QRALN 57 (75)
Q Consensus 34 ~~y~FWD~~HpTe~a~~~i-~~~~~ 57 (75)
...+.-|++||++++|+++ +.+..
T Consensus 157 ~~~~~~DgvHp~~~Gy~~~a~~i~~ 181 (183)
T cd04501 157 KPGLLTDGLHPSREGYRVMAPLAEK 181 (183)
T ss_pred cccccCCCCCCCHHHHHHHHHHHHH
Confidence 4566789999999999999 87764
No 24
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=94.81 E-value=0.018 Score=36.43 Aligned_cols=23 Identities=13% Similarity=0.089 Sum_probs=19.9
Q ss_pred cceeeCCCChhHHHHHHH-HHHHh
Q 047243 35 EYRFWDEFHTTEAMNRFG-QRALN 57 (75)
Q Consensus 35 ~y~FWD~~HpTe~a~~~i-~~~~~ 57 (75)
..++.|++||++++|+++ +.++.
T Consensus 174 ~~~~~Dg~Hpn~~G~~~~a~~l~~ 197 (199)
T cd01838 174 ESLLTDGLHFSSKGYELLFEEIVK 197 (199)
T ss_pred hhhcCCCCCcCHhHHHHHHHHHHh
Confidence 456789999999999999 88765
No 25
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=94.76 E-value=0.022 Score=36.44 Aligned_cols=23 Identities=22% Similarity=0.072 Sum_probs=18.8
Q ss_pred cceeeCCCChhHHHHHHH-HHHHh
Q 047243 35 EYRFWDEFHTTEAMNRFG-QRALN 57 (75)
Q Consensus 35 ~y~FWD~~HpTe~a~~~i-~~~~~ 57 (75)
.+..-|++||++++|+++ +.+..
T Consensus 168 ~~~~~Dg~Hpn~~G~~~~a~~~~~ 191 (193)
T cd01835 168 ELAATDGIHPNAAGYGWLAWLVLH 191 (193)
T ss_pred hhhccCCCCCCHHHHHHHHHHHhc
Confidence 344569999999999999 87754
No 26
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A ....
Probab=94.69 E-value=0.015 Score=35.39 Aligned_cols=19 Identities=26% Similarity=0.338 Sum_probs=17.0
Q ss_pred CcceeeCCCChhHHHHHHH
Q 047243 34 NEYRFWDEFHTTEAMNRFG 52 (75)
Q Consensus 34 ~~y~FWD~~HpTe~a~~~i 52 (75)
.++++.|++|||+++|++|
T Consensus 161 ~~~~~~D~~Hp~~~G~~~~ 179 (179)
T PF13472_consen 161 PKYYFSDGVHPNPAGHQLI 179 (179)
T ss_dssp HTCTBTTSSSBBHHHHHHH
T ss_pred hhhcCCCCCCcCHHHhCcC
Confidence 4688899999999999986
No 27
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=94.58 E-value=0.025 Score=36.04 Aligned_cols=25 Identities=20% Similarity=0.029 Sum_probs=20.9
Q ss_pred CcceeeCCCChhHHHHHHH-HHHHhc
Q 047243 34 NEYRFWDEFHTTEAMNRFG-QRALNA 58 (75)
Q Consensus 34 ~~y~FWD~~HpTe~a~~~i-~~~~~~ 58 (75)
..++.-|++||++++|+++ +.+...
T Consensus 163 ~~~~~~DglHpn~~Gy~~~a~~l~~~ 188 (191)
T cd01836 163 PALFASDGFHPSAAGYAVWAEALAPA 188 (191)
T ss_pred hhhccCCCCCCChHHHHHHHHHHHHH
Confidence 3566779999999999999 887753
No 28
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=94.51 E-value=0.027 Score=35.56 Aligned_cols=23 Identities=17% Similarity=0.020 Sum_probs=19.0
Q ss_pred cceeeCCCChhHHHHHHH-HHHHh
Q 047243 35 EYRFWDEFHTTEAMNRFG-QRALN 57 (75)
Q Consensus 35 ~y~FWD~~HpTe~a~~~i-~~~~~ 57 (75)
.++.=|++||++++|+++ +.+++
T Consensus 161 ~~~~~DgiHpn~~G~~~~A~~i~~ 184 (185)
T cd01832 161 RLWASDRLHPSAAGHARLAALVLA 184 (185)
T ss_pred cccccCCCCCChhHHHHHHHHHhh
Confidence 344459999999999999 88765
No 29
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=94.47 E-value=0.024 Score=37.21 Aligned_cols=24 Identities=21% Similarity=-0.032 Sum_probs=19.9
Q ss_pred cceeeCCCChhHHHHHHH-HHHHhc
Q 047243 35 EYRFWDEFHTTEAMNRFG-QRALNA 58 (75)
Q Consensus 35 ~y~FWD~~HpTe~a~~~i-~~~~~~ 58 (75)
..++.|++||++++|+++ +.+...
T Consensus 185 ~~~~~DGlHpn~~Gy~~~a~~l~~~ 209 (214)
T cd01820 185 HHDMPDYLHLTAAGYRKWADALHPT 209 (214)
T ss_pred HhhcCCCCCCCHHHHHHHHHHHHHH
Confidence 345689999999999999 887763
No 30
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=94.44 E-value=0.029 Score=35.44 Aligned_cols=22 Identities=23% Similarity=0.104 Sum_probs=19.1
Q ss_pred eeeCCCChhHHHHHHH-HHHHhc
Q 047243 37 RFWDEFHTTEAMNRFG-QRALNA 58 (75)
Q Consensus 37 ~FWD~~HpTe~a~~~i-~~~~~~ 58 (75)
.+.|++||++++|+++ +.++..
T Consensus 145 ~~~DgiHPn~~G~~~iA~~l~~~ 167 (169)
T cd01831 145 DIGCDWHPTVAGHQKIAKHLLPA 167 (169)
T ss_pred CcCCCCCCCHHHHHHHHHHHHHH
Confidence 4689999999999999 888753
No 31
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=94.37 E-value=0.024 Score=35.77 Aligned_cols=25 Identities=16% Similarity=-0.161 Sum_probs=20.8
Q ss_pred CcceeeCCCChhHHHHHHH-HHHHhc
Q 047243 34 NEYRFWDEFHTTEAMNRFG-QRALNA 58 (75)
Q Consensus 34 ~~y~FWD~~HpTe~a~~~i-~~~~~~ 58 (75)
..++..|++||++++|+++ +.+...
T Consensus 159 ~~~~~~Dg~Hp~~~G~~~~a~~i~~~ 184 (189)
T cd01825 159 PGLARKDYVHLTPRGYERLANLLYEA 184 (189)
T ss_pred ccccCCCcccCCcchHHHHHHHHHHH
Confidence 3567789999999999999 887753
No 32
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=94.31 E-value=0.032 Score=35.94 Aligned_cols=22 Identities=14% Similarity=-0.115 Sum_probs=19.6
Q ss_pred ceeeCCCChhHHHHHHH-HHHHh
Q 047243 36 YRFWDEFHTTEAMNRFG-QRALN 57 (75)
Q Consensus 36 y~FWD~~HpTe~a~~~i-~~~~~ 57 (75)
++.-|++||++++|+++ +.++.
T Consensus 174 ~~~~DgvHp~~~G~~~~a~~i~~ 196 (198)
T cd01821 174 EGPGDNTHFSEKGADVVARLVAE 196 (198)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHh
Confidence 66789999999999999 88775
No 33
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=94.04 E-value=0.041 Score=34.91 Aligned_cols=23 Identities=17% Similarity=-0.080 Sum_probs=19.5
Q ss_pred ceeeCCCChhHHHHHHH-HHHHhc
Q 047243 36 YRFWDEFHTTEAMNRFG-QRALNA 58 (75)
Q Consensus 36 y~FWD~~HpTe~a~~~i-~~~~~~ 58 (75)
.++-|++||++++|+++ +.++..
T Consensus 163 ~~~~Dg~Hpn~~G~~~~A~~i~~~ 186 (188)
T cd01827 163 ELVPDWVHPNEKGAYILAKVVYKA 186 (188)
T ss_pred cccCCCCCcCHHHHHHHHHHHHHH
Confidence 45679999999999999 888753
No 34
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family. Acyloxyacyl-hydrolase is a leukocyte-secreted enzyme that deacetylates bacterial lipopolysaccharides.
Probab=93.49 E-value=0.051 Score=38.90 Aligned_cols=23 Identities=17% Similarity=0.144 Sum_probs=20.3
Q ss_pred ccee-eCCCChhHHHHHHH-HHHHh
Q 047243 35 EYRF-WDEFHTTEAMNRFG-QRALN 57 (75)
Q Consensus 35 ~y~F-WD~~HpTe~a~~~i-~~~~~ 57 (75)
+++. -|++||+|.|+.++ +.+|+
T Consensus 280 ~~i~~~DgfHpsq~g~~l~a~~lW~ 304 (305)
T cd01826 280 QLIEPVDGFHPSQIANALLAEVFWK 304 (305)
T ss_pred hhcccccCCCccHHHHHHHHHHhhc
Confidence 5666 79999999999999 99885
No 35
>cd01823 SEST_like SEST_like. A family of secreted SGNH-hydrolases similar to Streptomyces scabies esterase (SEST), a causal agent of the potato scab disease, which hydrolyzes a specific ester bond in suberin, a plant lipid. The tertiary fold of this enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxylic acid.
Probab=92.52 E-value=0.095 Score=35.04 Aligned_cols=21 Identities=24% Similarity=0.186 Sum_probs=17.8
Q ss_pred eeeCCCChhHHHHHHH-HHHHh
Q 047243 37 RFWDEFHTTEAMNRFG-QRALN 57 (75)
Q Consensus 37 ~FWD~~HpTe~a~~~i-~~~~~ 57 (75)
..=|++||++++|+.+ +.++.
T Consensus 237 ~~~d~~HPn~~G~~~~A~~i~~ 258 (259)
T cd01823 237 RQGKPFHPNAAGHRAIADLIVD 258 (259)
T ss_pred CCccCCCCCHHHHHHHHHHHhh
Confidence 4459999999999999 87764
No 36
>COG2755 TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism]
Probab=91.87 E-value=0.13 Score=33.35 Aligned_cols=25 Identities=12% Similarity=-0.055 Sum_probs=20.8
Q ss_pred CcceeeCCCChhHHHHHHH-HHHHhc
Q 047243 34 NEYRFWDEFHTTEAMNRFG-QRALNA 58 (75)
Q Consensus 34 ~~y~FWD~~HpTe~a~~~i-~~~~~~ 58 (75)
.++..+|++||+.++|+.+ +.+...
T Consensus 182 ~~~~~~Dg~H~n~~Gy~~~a~~l~~~ 207 (216)
T COG2755 182 PELLTEDGLHPNAKGYQALAEALAEV 207 (216)
T ss_pred cccccCCCCCcCHhhHHHHHHHHHHH
Confidence 4555599999999999999 888764
No 37
>KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism]
Probab=89.53 E-value=0.096 Score=36.30 Aligned_cols=26 Identities=15% Similarity=0.166 Sum_probs=22.2
Q ss_pred cCCcceeeCCCChhHHHHHHH-HHHHh
Q 047243 32 NRNEYRFWDEFHTTEAMNRFG-QRALN 57 (75)
Q Consensus 32 ~~~~y~FWD~~HpTe~a~~~i-~~~~~ 57 (75)
|-.+-.|||+.|.|.++|+++ +.++.
T Consensus 180 dw~~~~ltDGLHlS~~G~~ivf~Ei~k 206 (245)
T KOG3035|consen 180 DWQTSCLTDGLHLSPKGNKIVFDEILK 206 (245)
T ss_pred cHHHHHhccceeeccccchhhHHHHHH
Confidence 334567999999999999999 98876
No 38
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=77.13 E-value=2.1 Score=28.70 Aligned_cols=25 Identities=20% Similarity=0.041 Sum_probs=21.1
Q ss_pred CCcceeeCCCChhHHHHHHH-HHHHh
Q 047243 33 RNEYRFWDEFHTTEAMNRFG-QRALN 57 (75)
Q Consensus 33 ~~~y~FWD~~HpTe~a~~~i-~~~~~ 57 (75)
...+--.|++|..++||+.+ +.++.
T Consensus 155 ~~~~~~~DgVHwn~~a~r~ls~lll~ 180 (183)
T cd01842 155 AMQHRVRDGVHWNYVAHRRLSNLLLA 180 (183)
T ss_pred HHhhcCCCCcCcCHHHHHHHHHHHHH
Confidence 44667789999999999999 88775
No 39
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=69.99 E-value=1.5 Score=29.19 Aligned_cols=22 Identities=9% Similarity=-0.200 Sum_probs=0.0
Q ss_pred cceeeCCCChhHHHHHHH-HHHH
Q 047243 35 EYRFWDEFHTTEAMNRFG-QRAL 56 (75)
Q Consensus 35 ~y~FWD~~HpTe~a~~~i-~~~~ 56 (75)
.-..=|++|||+.++..+ +.+.
T Consensus 152 ~e~tvDgvHP~DlG~~~~a~~l~ 174 (178)
T PF14606_consen 152 HEATVDGVHPNDLGMMRMADALE 174 (178)
T ss_dssp -----------------------
T ss_pred ccccccccccccccccccccccc
Confidence 345679999999999998 7654
No 40
>PF06812 ImpA-rel_N: ImpA-related N-terminal; InterPro: IPR010657 This entry represents a conserved region located towards the N-terminal end of ImpA and related proteins. ImpA is an inner membrane protein, which has been suggested to be involved with proteins that are exported and associated with colony variations in Actinobacillus actinomycetemcomitans []. Note that many members are hypothetical proteins.
Probab=61.65 E-value=2.9 Score=22.67 Aligned_cols=8 Identities=38% Similarity=1.344 Sum_probs=7.1
Q ss_pred eeCCCChh
Q 047243 38 FWDEFHTT 45 (75)
Q Consensus 38 FWD~~HpT 45 (75)
|||..||.
T Consensus 53 ~W~~l~P~ 60 (62)
T PF06812_consen 53 YWDSLHPQ 60 (62)
T ss_pred CCcccCCC
Confidence 89999995
No 41
>PF11691 DUF3288: Protein of unknown function (DUF3288); InterPro: IPR021705 This family of proteins with unknown function appears to be restricted to Cyanobacteria.
Probab=50.17 E-value=15 Score=22.02 Aligned_cols=31 Identities=19% Similarity=0.282 Sum_probs=24.9
Q ss_pred CCCChhHHHHHHH-HHHHhcCCCCCccccChhhhhc
Q 047243 40 DEFHTTEAMNRFG-QRALNAAHPSDAYPFDISHLIN 74 (75)
Q Consensus 40 D~~HpTe~a~~~i-~~~~~~~~~~~~~P~n~~~L~~ 74 (75)
|-.||-++--+.+ +.++.+. ..+.|+-+|+.
T Consensus 2 dQ~HP~~~~DR~~vd~Ll~~~----p~d~~L~eLAR 33 (90)
T PF11691_consen 2 DQQHPQYKTDREIVDRLLAGE----PTDYNLAELAR 33 (90)
T ss_pred CccCcchhhhHHHHHHHHcCC----CCchhHHHHHH
Confidence 4579999999999 9999874 46778888764
No 42
>PF04914 DltD_C: DltD C-terminal region; InterPro: IPR006998 The dlt operon (dltA to dltD) of Lactobacillus rhamnosus 7469 encodes four proteins responsible for the esterification of lipoteichoic acid (LTA) by D-alanine. These esters play an important role in controlling the net anionic charge of the poly (GroP) moiety of LTA. DltA and DltC encode the D-alanine-D-alanyl carrier protein ligase (Dcl) and D-alanyl carrier protein (Dcp), respectively. Whereas the functions of DltA and DltC are defined, the functions of DltB and DltD are unknown. In vitro assays showed that DltD bound Dcp for ligation with D-alanine by Dcl in the presence of ATP. In contrast, the homologue of Dcp, the Escherichia coli acyl carrier protein (ACP), involved in fatty acid biosynthesis, was not bound to DltD and thus was not ligated with D-alanine. DltD also catalyzed the hydrolysis of the mischarged D-alanyl-ACP. The hydrophobic N-terminal sequence of DltD was required for anchoring the protein in the membrane. It is hypothesized that this membrane-associated DltD facilitates the binding of Dcp and Dcl for ligation of Dcp with D-alanine and that the resulting D-alanyl-Dcp is translocated to the primary site of D-alanylation []. These sequences contain the C-terminal region of DltD.; PDB: 3BMA_C.
Probab=44.34 E-value=19 Score=22.64 Aligned_cols=24 Identities=17% Similarity=0.011 Sum_probs=19.5
Q ss_pred CCcceeeCCCChhHHHHHHH-HHHH
Q 047243 33 RNEYRFWDEFHTTEAMNRFG-QRAL 56 (75)
Q Consensus 33 ~~~y~FWD~~HpTe~a~~~i-~~~~ 56 (75)
-+.|++=|.+|+..+|+-.+ +.+.
T Consensus 100 y~~yfm~D~iHlgw~GWv~vd~~i~ 124 (130)
T PF04914_consen 100 YEPYFMQDTIHLGWKGWVYVDQAIY 124 (130)
T ss_dssp TSTTSBSSSSSB-THHHHHHHHHHH
T ss_pred CCCceeeecccCchhhHHHHHHHHH
Confidence 46899999999999999888 6654
No 43
>KOG3670 consensus Phospholipase [Lipid transport and metabolism]
Probab=41.74 E-value=20 Score=26.75 Aligned_cols=27 Identities=15% Similarity=0.105 Sum_probs=23.9
Q ss_pred CCcceeeCCCChhHHHHHHH-HHHHhcC
Q 047243 33 RNEYRFWDEFHTTEAMNRFG-QRALNAA 59 (75)
Q Consensus 33 ~~~y~FWD~~HpTe~a~~~i-~~~~~~~ 59 (75)
...++--|-+|.++.||.++ +.+|+..
T Consensus 323 d~~ffa~DcfHlS~~GHa~~ak~lWNnl 350 (397)
T KOG3670|consen 323 DLTFFAPDCFHLSQRGHAIAAKHLWNNL 350 (397)
T ss_pred CchhcccCccccchHHHHHHHHHHHHHh
Confidence 45778889999999999999 9999964
No 44
>PF13259 DUF4050: Protein of unknown function (DUF4050)
Probab=35.10 E-value=43 Score=20.63 Aligned_cols=30 Identities=7% Similarity=0.179 Sum_probs=18.1
Q ss_pred hhHHHHHHHHHHHhcCCCCCccccChhhhhc
Q 047243 44 TTEAMNRFGQRALNAAHPSDAYPFDISHLIN 74 (75)
Q Consensus 44 pTe~a~~~i~~~~~~~~~~~~~P~n~~~L~~ 74 (75)
|...-.++.+.++.... .+..||||+++++
T Consensus 80 p~~~y~~iY~~Lv~~~~-pf~~PI~L~dmv~ 109 (122)
T PF13259_consen 80 PPISYPAIYEKLVGSNK-PFKQPIPLSDMVD 109 (122)
T ss_pred chhhHHHHHHHHhcCCC-CCCCCcCHHHHHH
Confidence 44444444444443332 5789999999875
No 45
>TIGR03363 VI_chp_8 type VI secretion-associated protein, ImpA family. This protein family is one of two related families in type VI secretion systems that contain an ImpA-related N-terminal domain (pfam06812).
Probab=31.49 E-value=16 Score=26.33 Aligned_cols=8 Identities=38% Similarity=1.315 Sum_probs=7.3
Q ss_pred eeCCCChh
Q 047243 38 FWDEFHTT 45 (75)
Q Consensus 38 FWD~~HpT 45 (75)
|||.+||.
T Consensus 105 ~Wd~l~P~ 112 (353)
T TIGR03363 105 YWDDVHPL 112 (353)
T ss_pred cchhcCCC
Confidence 89999995
No 46
>KOG1193 consensus Arginyl-tRNA-protein transferase [Posttranslational modification, protein turnover, chaperones]
Probab=30.12 E-value=26 Score=26.78 Aligned_cols=8 Identities=38% Similarity=0.829 Sum_probs=7.1
Q ss_pred CcceeeCC
Q 047243 34 NEYRFWDE 41 (75)
Q Consensus 34 ~~y~FWD~ 41 (75)
+.|+|||.
T Consensus 332 SvYlfyDP 339 (511)
T KOG1193|consen 332 SVYLFYDP 339 (511)
T ss_pred eEEEEECC
Confidence 79999995
No 47
>PF05845 PhnH: Bacterial phosphonate metabolism protein (PhnH); InterPro: IPR008772 This family consists of several bacterial PhnH sequences, which is a component of the C-P lyase system (GenProp0232 from GENPROP) for the catabolism of phosphonate compounds []. The specific function of this component is unknown.; GO: 0015716 phosphonate transport; PDB: 2FSU_A.
Probab=29.80 E-value=43 Score=22.42 Aligned_cols=19 Identities=21% Similarity=0.174 Sum_probs=10.0
Q ss_pred eeCCCChhHHHHHHH-HHHH
Q 047243 38 FWDEFHTTEAMNRFG-QRAL 56 (75)
Q Consensus 38 FWD~~HpTe~a~~~i-~~~~ 56 (75)
|+|.+|=+|++.|.+ +.+-
T Consensus 5 f~d~v~d~Q~~FR~lL~AmS 24 (192)
T PF05845_consen 5 FADPVHDAQQVFRALLDAMS 24 (192)
T ss_dssp -------HHHHHHHHHHHHH
T ss_pred ccChHHHHHHHHHHHHHHhC
Confidence 899999999999999 7553
No 48
>PF05326 SVA: Seminal vesicle autoantigen (SVA); InterPro: IPR007990 This family consists of seminal vesicle autoantigen and prolactin-inducible (PIP) proteins. Seminal vesicle autoantigen (SVA) is specifically present in the seminal plasma of mice. This 19 kDa secretory glycoprotein suppresses the motility of spermatozoa by interacting with phospholipid. PIP has several known functions. In saliva, this protein plays a role in host defence by binding to microorganisms such as Streptococcus. PIP is an aspartyl proteinase and it acts as a factor capable of suppressing T-cell apoptosis through its interaction with CD4 [].; GO: 0005576 extracellular region; PDB: 3ES6_B.
Probab=28.08 E-value=25 Score=22.21 Aligned_cols=13 Identities=15% Similarity=0.340 Sum_probs=9.5
Q ss_pred ccccCCcceeeCC
Q 047243 29 ARKNRNEYRFWDE 41 (75)
Q Consensus 29 ~C~~~~~y~FWD~ 41 (75)
+|+|..+-+|||-
T Consensus 88 LC~d~~r~FyWDi 100 (124)
T PF05326_consen 88 LCDDYPRTFYWDI 100 (124)
T ss_dssp E-SSS-EEEEEEE
T ss_pred eCCCCCccEEEEE
Confidence 5898889999995
No 49
>cd02171 G3P_Cytidylyltransferase glycerol-3-phosphate cytidylyltransferase. Glycerol-3-phosphate cytidylyltransferase,(CDP-glycerol pyrophosphorylase). Glycerol-3-phosphate cytidyltransferase acts in pathways of teichoic acid biosynthesis. Teichoic acids are substituted polymers, linked by phosphodiester bonds, of glycerol, ribitol, etc. An example is poly(glycerol phosphate), the major teichoic acid of the Bacillus subtilis cell wall. Most, but not all, species encoding proteins in this family are Gram-positive bacteria. A closely related protein assigned a different function experimentally is a human ethanolamine-phosphate cytidylyltransferase.
Probab=26.79 E-value=71 Score=19.11 Aligned_cols=17 Identities=24% Similarity=0.098 Sum_probs=12.6
Q ss_pred eeCCCChhHHHHHHH-HHHHh
Q 047243 38 FWDEFHTTEAMNRFG-QRALN 57 (75)
Q Consensus 38 FWD~~HpTe~a~~~i-~~~~~ 57 (75)
.||++| .+|+.+ +...+
T Consensus 9 ~FDgvH---~GH~~ll~~a~~ 26 (129)
T cd02171 9 TFDLLH---IGHLNLLERAKA 26 (129)
T ss_pred eeccCC---HHHHHHHHHHHH
Confidence 699999 577777 66654
No 50
>COG4518 Mu-like prophage FluMu protein gp41 [Function unknown]
Probab=26.51 E-value=1e+02 Score=19.27 Aligned_cols=31 Identities=6% Similarity=0.094 Sum_probs=23.4
Q ss_pred ChhHHHHHHH-HHHHhcCCCCCccccChhhhhcC
Q 047243 43 HTTEAMNRFG-QRALNAAHPSDAYPFDISHLINM 75 (75)
Q Consensus 43 HpTe~a~~~i-~~~~~~~~~~~~~P~n~~~L~~~ 75 (75)
-|...+++++ ..+-.-. .+-.|+..+|+.++
T Consensus 54 Sp~l~G~eLLrRQia~vG--~i~GP~S~rqi~~L 85 (122)
T COG4518 54 SPVLMGMELLRRQIAFVG--NIQGPFSVRQILKL 85 (122)
T ss_pred ChHHHHHHHHHHHHHHHh--cCCCCcCHHHHHhh
Confidence 7999999999 6654322 47789999998653
No 51
>PF03444 HrcA_DNA-bdg: Winged helix-turn-helix transcription repressor, HrcA DNA-binding; InterPro: IPR005104 Prokaryotic cells have a defence mechanism against a sudden heat-shock stress. Commonly, they induce a set of proteins that protect cellular proteins from being denatured by heat. Among such proteins are the GroE and DnaK chaperones whose transcription is regulated by a heat-shock repressor protein HrcA. HrcA is a winged helix-turn-helix repressor that negatively regulates the transcription of dnaK and groE operons by binding the upstream CIRCE (controlling inverted repeat of chaperone expression) element. In Bacillus subtilis this element is a perfect 9 base pair inverted repeat separated by a 9 base pair spacer. The crystal structure of a heat-inducible transcriptional repressor, HrcA, from Thermotoga maritima has been reported at 2.2A resolution. HrcA is composed of three domains: an N-terminal winged helix-turn-helix domain (WHTH), a GAF-like domain, and an inserted dimerizing domain (IDD). The IDD shows a unique structural fold with an anti-parallel beta-sheet composed of three beta-strands sided by four alpha-helices. HrcA crystallises as a dimer, which is formed through hydrophobic contact between the IDDs and a limited contact that involves conserved residues between the GAF-like domains []. The structural studies suggest that the inactive form of HrcA is the dimer and this is converted to its DNA-binding form by interaction with GroEL, which binds to a conserved C-terminal sequence region [, ]. Comparison of the HrcA-CIRCE complexes from B. subtilis and Bacillus thermoglucosidasius (Geobacillus thermoglucosidasius), which grow at vastly different ranges of temperature shows that the thermostability profiles were consistent with the difference in the growth temperatures suggesting that HrcA can function as a thermosensor to detect temperature changes in cells []. Any increase in temperature causes the dissociation of the HrcA from the CIRCE complex with the concomitant activation of transcription of the groE and dnaK operons. This domain represents the winged helix-turn-helix DNA-binding domain which is located close to the N terminus of HrcA. This domain is also found at the N terminus of a set of uncharacterised proteins that have two C-terminal CBS domains. ; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent
Probab=26.38 E-value=45 Score=19.37 Aligned_cols=12 Identities=17% Similarity=-0.147 Sum_probs=10.5
Q ss_pred CCChhHHHHHHH
Q 047243 41 EFHTTEAMNRFG 52 (75)
Q Consensus 41 ~~HpTe~a~~~i 52 (75)
+.-||++||+++
T Consensus 62 GriPT~~aYr~~ 73 (78)
T PF03444_consen 62 GRIPTDKAYRAL 73 (78)
T ss_pred CCCcCHHHHHHH
Confidence 667999999988
No 52
>TIGR00809 secB protein-export chaperone SecB. The archaeal Methanococcus jannaschii homolog MJ0357 has been shown (PubMed:14985117) to share many properties, including chaperone-like activity, and scores between trusted and noise.
Probab=25.39 E-value=1e+02 Score=19.77 Aligned_cols=26 Identities=12% Similarity=0.194 Sum_probs=18.6
Q ss_pred HHHHH-HHHHhcCCCC-CccccChhhhh
Q 047243 48 MNRFG-QRALNAAHPS-DAYPFDISHLI 73 (75)
Q Consensus 48 a~~~i-~~~~~~~~~~-~~~P~n~~~L~ 73 (75)
+-++| +.+-+|.++. ...|||+.+|-
T Consensus 106 aRe~Vsdl~~~gGFPpl~L~pInF~aLY 133 (140)
T TIGR00809 106 AREIISSCVQRGTFPPLNLAPVNFDALY 133 (140)
T ss_pred HHHHHHHHHhhCCCCccccCccCHHHHH
Confidence 55677 7777776543 56799999875
No 53
>PF11599 AviRa: RRNA methyltransferase AviRa; InterPro: IPR024268 This family of proteins includes the methyltransferase AviRa from Streptomyces viridochromogenes. This protein mediates the resistance to the antibiotic avilamycin. AviRa methylates a specific guanine base within the peptidyl-transferase loop of the 23S ribosomal RNA [].; PDB: 1O9H_A 1O9G_A.
Probab=25.33 E-value=26 Score=24.56 Aligned_cols=9 Identities=33% Similarity=0.763 Sum_probs=6.0
Q ss_pred Ccccccccc
Q 047243 11 DAPCCKTVG 19 (75)
Q Consensus 11 ~~aCCg~g~ 19 (75)
-++|||+|.
T Consensus 56 yDPCCG~gy 64 (246)
T PF11599_consen 56 YDPCCGSGY 64 (246)
T ss_dssp EETT-TTSH
T ss_pred eccCCCccH
Confidence 479999864
No 54
>TIGR00083 ribF riboflavin kinase/FMN adenylyltransferase. multifunctional enzyme: riboflavin kinase (EC 2.7.1.26) (flavokinase) / FMN adenylyltransferase (EC 2.7.7.2) (FAD pyrophosphorylase) (FAD synthetase).
Probab=24.98 E-value=66 Score=22.71 Aligned_cols=17 Identities=18% Similarity=0.245 Sum_probs=14.2
Q ss_pred eeCCCChhHHHHHHH-HHHHh
Q 047243 38 FWDEFHTTEAMNRFG-QRALN 57 (75)
Q Consensus 38 FWD~~HpTe~a~~~i-~~~~~ 57 (75)
+||++| .+|+.+ +.+..
T Consensus 6 ~FDGvH---~GHq~Li~~~~~ 23 (288)
T TIGR00083 6 YFDGLH---LGHQALLQELKQ 23 (288)
T ss_pred eCCccC---HHHHHHHHHHHH
Confidence 689999 789988 77764
No 55
>PRK13031 preprotein translocase subunit SecB; Provisional
Probab=24.56 E-value=99 Score=20.10 Aligned_cols=27 Identities=4% Similarity=-0.010 Sum_probs=20.6
Q ss_pred HHHHHH-HHHHhcCCC-CCccccChhhhh
Q 047243 47 AMNRFG-QRALNAAHP-SDAYPFDISHLI 73 (75)
Q Consensus 47 ~a~~~i-~~~~~~~~~-~~~~P~n~~~L~ 73 (75)
-|-++| +..-+|.++ -...|||+..|-
T Consensus 108 yaRe~Isd~v~~GGFPpL~L~PInF~aLY 136 (149)
T PRK13031 108 YAREAISDLVISGGFPQLCLSAVNFDAMY 136 (149)
T ss_pred HHHHHHHHHHhcCCCCccccCccCHHHHH
Confidence 467788 888888764 457899998774
No 56
>PF08885 GSCFA: GSCFA family; InterPro: IPR014982 This group of proteins are functionally uncharacterised. They have been named GSCFA after a highly conserved N-terminal motif in the alignment, they are functionally uncharacterised.
Probab=24.38 E-value=43 Score=23.30 Aligned_cols=24 Identities=25% Similarity=0.501 Sum_probs=18.4
Q ss_pred ccCCcceee--CCCChhHHHHHHH-HH
Q 047243 31 KNRNEYRFW--DEFHTTEAMNRFG-QR 54 (75)
Q Consensus 31 ~~~~~y~FW--D~~HpTe~a~~~i-~~ 54 (75)
..-..|-|| |..||++.|-..| +.
T Consensus 224 d~lrdyrfy~~D~~Hps~~aV~~I~~~ 250 (251)
T PF08885_consen 224 DELRDYRFYAEDMRHPSPQAVDYIWER 250 (251)
T ss_pred CcccccccccccCCCCCHHHHHHHHhh
Confidence 444567666 7899999998888 65
No 57
>PRK00109 Holliday junction resolvase-like protein; Reviewed
Probab=23.06 E-value=91 Score=19.47 Aligned_cols=21 Identities=19% Similarity=-0.073 Sum_probs=18.3
Q ss_pred CcceeeCCCChhHHHHHHH-HH
Q 047243 34 NEYRFWDEFHTTEAMNRFG-QR 54 (75)
Q Consensus 34 ~~y~FWD~~HpTe~a~~~i-~~ 54 (75)
-...|||.-.-|..|.+++ +.
T Consensus 90 ~~v~~~DEr~TT~~A~~~l~~~ 111 (138)
T PRK00109 90 LPVVLVDERLSTVEAERALADV 111 (138)
T ss_pred CCEEEEcCCcCHHHHHHHHHHc
Confidence 4799999999999999988 53
No 58
>PF04921 XAP5: XAP5, circadian clock regulator; InterPro: IPR007005 These proteins are found in a wide range of eukaryotes. Their function is uncertain though they are nuclear proteins, possibly with DNA-binding activity.; GO: 0005634 nucleus
Probab=22.54 E-value=40 Score=23.51 Aligned_cols=8 Identities=25% Similarity=1.032 Sum_probs=6.5
Q ss_pred cceeeCCC
Q 047243 35 EYRFWDEF 42 (75)
Q Consensus 35 ~y~FWD~~ 42 (75)
.|+||||-
T Consensus 102 ~fsywDGs 109 (239)
T PF04921_consen 102 PFSYWDGS 109 (239)
T ss_pred EEEEECCC
Confidence 58999984
No 59
>PF04915 DltD_N: DltD N-terminal region; InterPro: IPR006999 The dlt operon (dltA to dltD) of Lactobacillus rhamnosus 7469 encodes four proteins responsible for the esterification of lipoteichoic acid (LTA) by D-alanine. These esters play an important role in controlling the net anionic charge of the poly (GroP) moiety of LTA. DltA and DltC encode the D-alanine-D-alanyl carrier protein ligase (Dcl) and D-alanyl carrier protein (Dcp), respectively. Whereas the functions of DltA and DltC are defined, the functions of DltB and DltD are unknown. In vitro assays showed that DltD bound Dcp for ligation with D-alanine by Dcl in the presence of ATP. In contrast, the homologue of Dcp, the Escherichia coli acyl carrier protein (ACP), involved in fatty acid biosynthesis, was not bound to DltD and thus was not ligated with D-alanine. DltD also catalyzed the hydrolysis of the mischarged D-alanyl-ACP. The hydrophobic N-terminal sequence of DltD was required for anchoring the protein in the membrane. It is hypothesized that this membrane-associated DltD facilitates the binding of Dcp and Dcl for ligation of Dcp with D-alanine and that the resulting D-alanyl-Dcp is translocated to the primary site of D-alanylation []. These sequences contain the N-terminal region of DltD.; PDB: 3BMA_C.
Probab=21.29 E-value=72 Score=17.71 Aligned_cols=17 Identities=24% Similarity=0.458 Sum_probs=10.3
Q ss_pred CcceeeCCCChhHHHHH
Q 047243 34 NEYRFWDEFHTTEAMNR 50 (75)
Q Consensus 34 ~~y~FWD~~HpTe~a~~ 50 (75)
++.-=.|.+||+-.+.+
T Consensus 37 SEl~r~D~~HPsvl~~k 53 (62)
T PF04915_consen 37 SELSRFDPFHPSVLAEK 53 (62)
T ss_dssp STTTS--TTSHHHHHHH
T ss_pred HHHhccCCcCHHHHHHh
Confidence 34445799999977654
No 60
>COG5601 CDC36 General negative regulator of transcription subunit [Transcription]
Probab=20.83 E-value=47 Score=21.86 Aligned_cols=17 Identities=35% Similarity=0.708 Sum_probs=13.2
Q ss_pred ccCCcceeeCCCChhHH
Q 047243 31 KNRNEYRFWDEFHTTEA 47 (75)
Q Consensus 31 ~~~~~y~FWD~~HpTe~ 47 (75)
..+..|+|+|.+|=+.-
T Consensus 144 ~ergsyvfFDP~~W~k~ 160 (172)
T COG5601 144 KERGSYVFFDPFSWSKV 160 (172)
T ss_pred cccceEEEEcchhHHHH
Confidence 36789999999986543
No 61
>PF11124 Pho86: Inorganic phosphate transporter Pho86; InterPro: IPR024297 Pho86p is an ER protein which is produced in response to phosphate starvation. It is essential for growth when phosphate levels are limiting []. Pho86p is also involved in the regulation of Pho84p, a high-affinity phosphate transporter, which is localised to the endoplasmic reticulum (ER) in low phosphate medium. When the level of phosphate increases Pho84p is transported to the vacuole. Pho86p is required for packaging of Pho84p in to COPII vesicles [].
Probab=20.70 E-value=73 Score=23.05 Aligned_cols=36 Identities=22% Similarity=0.178 Sum_probs=21.3
Q ss_pred cccCCcceeeCCCChhHHHHHHH-HHHHhcCCCCCccccChh
Q 047243 30 RKNRNEYRFWDEFHTTEAMNRFG-QRALNAAHPSDAYPFDIS 70 (75)
Q Consensus 30 C~~~~~y~FWD~~HpTe~a~~~i-~~~~~~~~~~~~~P~n~~ 70 (75)
....++|+|| ||-...--.+ -..+-.. ....|++++
T Consensus 43 Qs~~Nk~l~w---HPi~~~~~~~~~~~~~~~--~l~~~~~is 79 (304)
T PF11124_consen 43 QSLLNKYLFW---HPITISVIVLVLPIYLYY--KLWDPIEIS 79 (304)
T ss_pred HHHhcceeEe---ccHHHHHHHHHHHHHHHH--Hheeehhhc
Confidence 4566999999 8866554444 3333322 456666644
No 62
>TIGR00250 RNAse_H_YqgF RNAse H-fold protein YqgF. This protein family, which exhibits an RNAse H fold in crystal structure, has been proposed as a putative Holliday junction resolvase, an alternate to RuvC.
Probab=20.68 E-value=1.1e+02 Score=18.94 Aligned_cols=21 Identities=24% Similarity=0.170 Sum_probs=18.7
Q ss_pred CcceeeCCCChhHHHHHHH-HH
Q 047243 34 NEYRFWDEFHTTEAMNRFG-QR 54 (75)
Q Consensus 34 ~~y~FWD~~HpTe~a~~~i-~~ 54 (75)
-...|||....|..|.+.+ +.
T Consensus 84 ~~v~~~DEr~TT~~A~~~l~~~ 105 (130)
T TIGR00250 84 VPVVLWDERLSTVEAESGLFAR 105 (130)
T ss_pred CCEEEEcCCcCHHHHHHHHHHc
Confidence 4689999999999999998 74
No 63
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.40 E-value=75 Score=23.46 Aligned_cols=24 Identities=21% Similarity=-0.050 Sum_probs=19.1
Q ss_pred CcceeeCCCChhHHHHHHH-HHHHh
Q 047243 34 NEYRFWDEFHTTEAMNRFG-QRALN 57 (75)
Q Consensus 34 ~~y~FWD~~HpTe~a~~~i-~~~~~ 57 (75)
-.+--=|++|.|.++.+.+ ..+..
T Consensus 291 vrlR~~DGIh~T~~Gkrkla~~~~k 315 (354)
T COG2845 291 VRLRAKDGIHFTKEGKRKLAFYLEK 315 (354)
T ss_pred EEEeccCCceechhhHHHHHHHHHH
Confidence 3555669999999999998 77654
Done!