Query         047245
Match_columns 380
No_of_seqs    313 out of 3365
Neff          9.7 
Searched_HMMs 29240
Date          Mon Mar 25 15:59:34 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047245.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047245hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 4gt4_A Tyrosine-protein kinase 100.0 1.6E-59 5.4E-64  430.2  13.8  252   98-378    27-305 (308)
  2 4asz_A BDNF/NT-3 growth factor 100.0 4.9E-59 1.7E-63  425.2  16.0  248  101-378    17-288 (299)
  3 4aoj_A High affinity nerve gro 100.0 2.3E-58 7.9E-63  426.3  19.5  248  101-378    45-318 (329)
  4 3omv_A RAF proto-oncogene seri 100.0 1.9E-57 6.6E-62  414.9  21.6  249  101-378    40-299 (307)
  5 3hmm_A TGF-beta receptor type- 100.0 3.1E-56 1.1E-60  408.8  19.5  258  101-378     7-296 (303)
  6 3fpq_A Serine/threonine-protei 100.0 3.5E-55 1.2E-59  397.1  22.4  241  101-372    30-282 (290)
  7 4b9d_A Serine/threonine-protei 100.0 7.7E-55 2.6E-59  403.3  21.6  242  101-372    28-276 (350)
  8 4g3f_A NF-kappa-beta-inducing  100.0 6.2E-55 2.1E-59  402.1  17.4  239  101-376    62-313 (336)
  9 4fih_A Serine/threonine-protei 100.0   1E-54 3.5E-59  401.9  17.9  238  102-372    79-323 (346)
 10 4ase_A Vascular endothelial gr 100.0 6.3E-55 2.2E-59  406.5  16.4  250  100-377    67-345 (353)
 11 4aw0_A HPDK1, 3-phosphoinositi 100.0 9.4E-54 3.2E-58  389.8  17.5  239  101-371    36-283 (311)
 12 3hyh_A Carbon catabolite-derep 100.0   8E-53 2.8E-57  378.4  22.4  239  101-372    17-262 (275)
 13 4fie_A Serine/threonine-protei 100.0 2.3E-53 7.7E-58  402.3  18.5  238  102-372   156-400 (423)
 14 3ubd_A Ribosomal protein S6 ki 100.0 3.2E-53 1.1E-57  386.2  12.1  235  100-367    27-271 (304)
 15 4g31_A Eukaryotic translation  100.0 1.1E-51 3.9E-56  377.0  21.1  240  101-372     9-279 (299)
 16 4b99_A Mitogen-activated prote 100.0 5.2E-48 1.8E-52  365.9  22.3  250  101-372    58-344 (398)
 17 3uim_A Brassinosteroid insensi 100.0 1.5E-48   5E-53  362.3  18.0  282   88-377    19-309 (326)
 18 4f9c_A Cell division cycle 7-r 100.0 1.4E-47 4.9E-52  359.0  21.0  184  101-304    25-249 (361)
 19 2qkw_B Protein kinase; three-h 100.0 1.3E-47 4.4E-52  355.3  20.2  264  101-378    43-314 (321)
 20 3v5w_A G-protein coupled recep 100.0 5.5E-47 1.9E-51  374.4  20.7  245  101-371   193-448 (689)
 21 3uto_A Twitchin; kinase, muscl 100.0 7.7E-47 2.6E-51  374.4  20.7  242  101-372   161-410 (573)
 22 3p86_A Serine/threonine-protei 100.0 1.3E-46 4.3E-51  346.8  19.3  249  101-378    41-297 (309)
 23 3s95_A LIMK-1, LIM domain kina 100.0 9.7E-46 3.3E-50  340.9  25.1  247  101-378    14-281 (310)
 24 2nru_A Interleukin-1 receptor- 100.0 2.2E-45 7.4E-50  338.0  26.7  278   86-379    12-306 (307)
 25 3soc_A Activin receptor type-2 100.0 3.6E-46 1.2E-50  345.8  18.8  255  101-378    28-317 (322)
 26 2psq_A Fibroblast growth facto 100.0 9.1E-46 3.1E-50  349.5  20.6  249  101-378    85-363 (370)
 27 3cbl_A C-FES, proto-oncogene t 100.0 1.3E-46 4.5E-51  356.2  14.2  246  101-378   118-373 (377)
 28 3kul_A Ephrin type-A receptor  100.0 5.8E-46   2E-50  344.8  18.2  246  101-378    53-312 (325)
 29 3fxz_A Serine/threonine-protei 100.0 1.8E-45 6.1E-50  337.3  20.1  239  101-372    24-269 (297)
 30 2qol_A Ephrin receptor; recept 100.0 4.8E-46 1.6E-50  351.7  16.4  245  101-377    49-307 (373)
 31 3fe3_A MAP/microtubule affinit 100.0 5.7E-45 1.9E-49  338.3  23.0  239  101-372    19-264 (328)
 32 2c30_A Serine/threonine-protei 100.0 4.2E-45 1.4E-49  338.5  21.7  253   87-372    23-294 (321)
 33 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.8E-45 6.2E-50  331.9  18.4  245  101-379    12-264 (268)
 34 4hcu_A Tyrosine-protein kinase 100.0 1.8E-45 6.2E-50  332.2  16.7  244  101-378    14-265 (269)
 35 1qcf_A Haematopoetic cell kina 100.0 1.5E-45 5.2E-50  357.3  16.5  245  100-378   191-443 (454)
 36 1k9a_A Carboxyl-terminal SRC k 100.0 7.6E-45 2.6E-49  351.8  21.4  243  101-378   197-444 (450)
 37 3ugc_A Tyrosine-protein kinase 100.0 3.2E-45 1.1E-49  335.0  17.4  257  101-378    14-290 (295)
 38 1opk_A P150, C-ABL, proto-onco 100.0 8.9E-46 3.1E-50  362.4  14.3  247   99-378   222-477 (495)
 39 3zgw_A Maternal embryonic leuc 100.0 1.7E-44 5.7E-49  337.3  21.8  238  101-372    14-260 (347)
 40 3dtc_A Mitogen-activated prote 100.0 3.8E-45 1.3E-49  330.3  16.6  246  101-377    11-271 (271)
 41 3kmu_A ILK, integrin-linked ki 100.0 5.9E-45   2E-49  328.6  17.6  249  101-379    14-270 (271)
 42 3l9p_A Anaplastic lymphoma kin 100.0 3.5E-45 1.2E-49  345.2  16.3  249  101-378    75-344 (367)
 43 4eqm_A Protein kinase; transfe 100.0 9.5E-44 3.2E-48  325.3  25.3  251  101-378    15-274 (294)
 44 3q4u_A Activin receptor type-1 100.0 1.9E-44 6.3E-49  330.6  19.7  252  101-377    12-300 (301)
 45 3gen_A Tyrosine-protein kinase 100.0 1.6E-44 5.5E-49  328.3  18.8  243  101-377    28-278 (283)
 46 3tt0_A Basic fibroblast growth 100.0 1.3E-44 4.4E-49  343.2  18.7  250  100-378    72-351 (382)
 47 1luf_A Muscle-specific tyrosin 100.0 8.8E-45   3E-49  339.0  17.2  249  101-378    51-334 (343)
 48 2ivs_A Proto-oncogene tyrosine 100.0 1.2E-44   4E-49  333.9  17.5  248  101-377    27-309 (314)
 49 3c0i_A Peripheral plasma membr 100.0 4.6E-44 1.6E-48  335.6  21.5  251   99-372    26-286 (351)
 50 3lb7_A RAF proto-oncogene seri 100.0 5.7E-44   2E-48  328.8  21.4  250  100-378    39-299 (307)
 51 1tki_A Titin; serine kinase, m 100.0 6.6E-44 2.3E-48  330.3  21.7  241  101-372     9-257 (321)
 52 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 5.7E-45   2E-49  352.9  15.2  245  100-378   187-439 (452)
 53 4f0f_A Serine/threonine-protei 100.0 1.1E-43 3.6E-48  323.5  22.6  252  101-377    23-287 (287)
 54 2wqm_A Serine/threonine-protei 100.0 4.9E-44 1.7E-48  329.5  20.3  255  101-379    36-297 (310)
 55 3poz_A Epidermal growth factor 100.0 7.8E-45 2.7E-49  337.5  15.0  245  101-378    19-277 (327)
 56 3qd2_B Eukaryotic translation  100.0 7.7E-44 2.6E-48  330.8  21.4  240  101-372    10-325 (332)
 57 3p1a_A MYT1 kinase, membrane-a 100.0 5.8E-44   2E-48  329.3  20.4  239   99-372    59-304 (311)
 58 1o6l_A RAC-beta serine/threoni 100.0 1.3E-43 4.5E-48  330.2  22.9  240  101-372     9-260 (337)
 59 3kfa_A Tyrosine-protein kinase 100.0 9.3E-45 3.2E-49  330.6  14.8  246   99-377    15-269 (288)
 60 2yab_A Death-associated protei 100.0 1.2E-43 4.1E-48  333.4  22.5  247  101-372    16-272 (361)
 61 3vhe_A Vascular endothelial gr 100.0 7.6E-45 2.6E-49  341.6  14.3  250  101-378    26-354 (359)
 62 2buj_A Serine/threonine-protei 100.0   1E-43 3.5E-48  328.3  21.5  251  101-379    33-306 (317)
 63 3soa_A Calcium/calmodulin-depe 100.0 1.3E-43 4.6E-48  341.6  23.0  243  101-372    15-267 (444)
 64 4dc2_A Protein kinase C IOTA t 100.0 1.3E-43 4.4E-48  336.4  22.6  244  101-367    56-307 (396)
 65 3qup_A Tyrosine-protein kinase 100.0   4E-44 1.4E-48  331.9  18.5  250  101-378    27-297 (323)
 66 3niz_A Rhodanese family protei 100.0 1.1E-43 3.7E-48  327.5  21.1  254  101-372    25-300 (311)
 67 2bdw_A Hypothetical protein K1 100.0 1.1E-43 3.8E-48  334.2  21.1  244  100-372    32-284 (362)
 68 1mp8_A Focal adhesion kinase 1 100.0 3.6E-44 1.2E-48  325.8  17.0  244  101-377    19-274 (281)
 69 4euu_A Serine/threonine-protei 100.0 1.7E-43 5.9E-48  327.3  21.5  260  101-376    13-306 (319)
 70 2eva_A TAK1 kinase - TAB1 chim 100.0 9.1E-44 3.1E-48  327.4  19.5  248  101-379    12-263 (307)
 71 3op5_A Serine/threonine-protei 100.0 1.6E-43 5.5E-48  333.5  21.6  260  101-377    39-327 (364)
 72 3lxp_A Non-receptor tyrosine-p 100.0 1.7E-44 5.7E-49  334.0  14.6  259  101-378    35-309 (318)
 73 3g2f_A Bone morphogenetic prot 100.0 2.5E-44 8.4E-49  335.1  15.7  253  101-378    17-317 (336)
 74 4fvq_A Tyrosine-protein kinase 100.0 1.7E-44 5.7E-49  329.1  14.3  244  101-378    12-274 (289)
 75 1t46_A HOMO sapiens V-KIT hard 100.0 4.1E-44 1.4E-48  330.1  16.9  250  100-377    26-305 (313)
 76 2x4f_A Myosin light chain kina 100.0   3E-43   1E-47  332.4  23.2  241  102-372    94-342 (373)
 77 3t9t_A Tyrosine-protein kinase 100.0 3.6E-44 1.2E-48  323.0  16.1  244  101-378    12-263 (267)
 78 3mdy_A Bone morphogenetic prot 100.0   4E-43 1.4E-47  326.9  23.5  251  100-378    40-330 (337)
 79 2y0a_A Death-associated protei 100.0 2.9E-43 9.8E-48  326.8  22.4  248  100-372    14-271 (326)
 80 3a8x_A Protein kinase C IOTA t 100.0 3.4E-43 1.2E-47  328.6  22.9  244  101-367    13-264 (345)
 81 1mqb_A Ephrin type-A receptor  100.0 1.1E-43 3.9E-48  330.5  19.4  244  102-377    49-307 (333)
 82 1fot_A TPK1 delta, CAMP-depend 100.0 3.4E-43 1.2E-47  325.0  22.4  239  101-371    10-257 (318)
 83 3h4j_B AMPK kdaid, SNF1-like p 100.0 5.9E-44   2E-48  332.3  17.4  239  101-372    13-258 (336)
 84 1rjb_A FL cytokine receptor; k 100.0 3.1E-44   1E-48  335.7  15.3  251  100-378    48-333 (344)
 85 1u5q_A Serine/threonine protei 100.0 1.1E-43 3.7E-48  332.5  19.1  242  101-372    58-305 (348)
 86 4e5w_A Tyrosine-protein kinase 100.0 5.6E-44 1.9E-48  327.7  16.7  256   99-378    23-301 (302)
 87 2zv2_A Calcium/calmodulin-depe 100.0 6.9E-44 2.4E-48  326.7  17.3  246  101-372    17-292 (298)
 88 1u59_A Tyrosine-protein kinase 100.0 8.6E-44 2.9E-48  324.3  17.8  242  103-377    16-270 (287)
 89 1xbb_A Tyrosine-protein kinase 100.0 8.1E-44 2.8E-48  325.1  17.5  241  104-377    24-277 (291)
 90 2izr_A Casein kinase I isoform 100.0 1.9E-43 6.5E-48  328.6  20.2  247  101-377    13-279 (330)
 91 1csn_A Casein kinase-1; phosph 100.0 3.3E-43 1.1E-47  321.9  21.2  248  101-377    14-281 (298)
 92 2ozo_A Tyrosine-protein kinase 100.0 8.6E-44 2.9E-48  356.4  18.8  241  104-377   343-596 (613)
 93 4fl3_A Tyrosine-protein kinase 100.0 4.7E-44 1.6E-48  359.2  16.9  242  103-377   375-629 (635)
 94 3tki_A Serine/threonine-protei 100.0 6.3E-44 2.2E-48  330.8  16.3  241  101-372    11-261 (323)
 95 3og7_A AKAP9-BRAF fusion prote 100.0 1.5E-43 5.2E-48  323.0  18.5  250  100-378    27-287 (289)
 96 3kn6_A Ribosomal protein S6 ki 100.0 2.9E-43 9.8E-48  326.7  20.6  243  102-371    16-269 (325)
 97 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.3E-43 4.6E-48  332.2  18.4  235  101-367    27-269 (353)
 98 3c1x_A Hepatocyte growth facto 100.0 4.8E-44 1.6E-48  337.8  15.4  245  101-377    93-353 (373)
 99 2pvf_A Fibroblast growth facto 100.0 1.1E-43 3.9E-48  330.6  17.7  250  100-378    38-317 (334)
100 2h8h_A Proto-oncogene tyrosine 100.0 3.6E-44 1.2E-48  354.1  14.9  245  100-378   270-522 (535)
101 3lxl_A Tyrosine-protein kinase 100.0 1.7E-43 5.9E-48  328.4  18.7  260  101-378    27-302 (327)
102 1rdq_E PKA C-alpha, CAMP-depen 100.0   4E-43 1.4E-47  328.7  20.9  240  101-372    45-293 (350)
103 3gni_B Strad alpha; kinase fol 100.0 7.3E-43 2.5E-47  331.9  23.1  193  101-304    29-239 (389)
104 1t4h_A Serine/threonine-protei 100.0 9.6E-43 3.3E-47  317.8  22.7  241  101-372    30-282 (290)
105 1qpc_A LCK kinase; alpha beta  100.0 8.7E-44   3E-48  322.8  15.7  243  101-377    17-267 (279)
106 3pls_A Macrophage-stimulating  100.0 2.4E-43 8.2E-48  322.7  18.7  247  101-378    25-286 (298)
107 2a19_B Interferon-induced, dou 100.0 1.7E-43 5.7E-48  321.4  17.5  237  101-378    15-273 (284)
108 4fr4_A YANK1, serine/threonine 100.0 7.1E-43 2.4E-47  330.2  22.4  242  101-371    19-270 (384)
109 3kex_A Receptor tyrosine-prote 100.0 6.1E-44 2.1E-48  331.2  14.8  245  101-378    17-275 (325)
110 3brb_A Proto-oncogene tyrosine 100.0 3.9E-43 1.3E-47  323.9  19.9  250  101-378    38-307 (313)
111 3a62_A Ribosomal protein S6 ki 100.0 4.6E-43 1.6E-47  325.6  20.3  241  101-372    21-276 (327)
112 1kob_A Twitchin; kinase, intra 100.0   1E-42 3.5E-47  330.0  22.9  242  101-372    55-304 (387)
113 3is5_A Calcium-dependent prote 100.0 1.2E-42 3.9E-47  316.6  22.2  245  100-372    25-278 (285)
114 3kk8_A Calcium/calmodulin depe 100.0 1.2E-42 3.9E-47  316.1  22.1  243  101-372    10-261 (284)
115 3fdn_A Serine/threonine-protei 100.0 1.4E-42 4.6E-47  315.0  22.4  240  101-372    13-257 (279)
116 3dls_A PAS domain-containing s 100.0 1.7E-43 5.9E-48  329.5  16.8  239  101-372    28-274 (335)
117 3f66_A Hepatocyte growth facto 100.0 3.1E-43 1.1E-47  322.2  18.2  246  101-378    29-290 (298)
118 2w5a_A Serine/threonine-protei 100.0 2.1E-43 7.3E-48  320.1  16.9  247  101-375    10-270 (279)
119 2i1m_A Macrophage colony-stimu 100.0 7.2E-44 2.5E-48  331.7  14.1  249  101-377    50-324 (333)
120 3uc3_A Serine/threonine-protei 100.0 1.4E-42 4.7E-47  326.7  22.8  242  101-372    24-274 (361)
121 2pmi_A Negative RE, cyclin-dep 100.0 3.8E-42 1.3E-46  318.1  25.4  250  102-372    10-293 (317)
122 3dbq_A Dual specificity protei 100.0 3.4E-43 1.2E-47  328.6  18.6  240  101-372    13-273 (343)
123 1p4o_A Insulin-like growth fac 100.0 2.5E-43 8.4E-48  326.5  17.4  249  100-377    28-297 (322)
124 3gxj_A TGF-beta receptor type- 100.0 5.9E-45   2E-49  334.1   6.4  254  101-379     7-297 (303)
125 3cc6_A Protein tyrosine kinase 100.0 3.2E-43 1.1E-47  319.5  17.7  245  101-378    16-272 (281)
126 3o0g_A Cell division protein k 100.0 9.1E-43 3.1E-47  318.3  20.7  251  102-372     7-282 (292)
127 1byg_A CSK, protein (C-termina 100.0 1.8E-43 6.2E-48  320.6  15.9  243  101-378    25-272 (278)
128 1xjd_A Protein kinase C, theta 100.0 5.5E-43 1.9E-47  326.9  19.3  239  101-371    21-268 (345)
129 1x8b_A WEE1HU, WEE1-like prote 100.0 1.1E-42 3.8E-47  316.4  20.6  241  101-372    15-279 (289)
130 3lzb_A Epidermal growth factor 100.0   3E-43   1E-47  326.9  17.1  245  101-378    19-277 (327)
131 1ob3_A PFPK5, cell division co 100.0 2.8E-43 9.7E-48  321.1  16.5  253  102-372     7-280 (288)
132 2w4o_A Calcium/calmodulin-depe 100.0   5E-43 1.7E-47  328.2  18.6  240  101-372    57-305 (349)
133 3ork_A Serine/threonine protei 100.0 1.9E-43 6.5E-48  325.8  15.5  248  101-376    16-278 (311)
134 3cok_A Serine/threonine-protei 100.0 6.3E-43 2.1E-47  317.0  18.5  241  101-372    15-262 (278)
135 2w1i_A JAK2; chromosomal rearr 100.0 3.8E-43 1.3E-47  326.0  17.4  257  101-378    45-321 (326)
136 4ejn_A RAC-alpha serine/threon 100.0   3E-43   1E-47  340.5  17.4  240  101-372   152-404 (446)
137 3f3z_A Calcium/calmodulin-depe 100.0 1.6E-42 5.4E-47  314.2  20.9  240  101-372    13-261 (277)
138 2y94_A 5'-AMP-activated protei 100.0 9.7E-43 3.3E-47  337.9  20.7  240  101-372    20-266 (476)
139 2zmd_A Dual specificity protei 100.0 9.5E-43 3.3E-47  331.0  20.1  240  101-372    60-320 (390)
140 1b6c_B TGF-B superfamily recep 100.0   9E-43 3.1E-47  325.3  19.5  254  100-378    45-335 (342)
141 2eue_A Carbon catabolite derep 100.0 1.2E-42 4.2E-47  314.7  19.7  239  101-372    17-262 (275)
142 2y7j_A Phosphorylase B kinase  100.0 3.5E-42 1.2E-46  324.4  23.4  249  101-372    98-359 (365)
143 2h34_A Serine/threonine-protei 100.0 5.2E-42 1.8E-46  316.0  24.0  248  101-377    38-294 (309)
144 2v62_A Serine/threonine-protei 100.0 1.3E-43 4.5E-48  331.7  13.4  260  101-378    41-327 (345)
145 1fvr_A Tyrosine-protein kinase 100.0 3.6E-43 1.2E-47  326.3  16.2  248  101-377    29-298 (327)
146 2i0e_A Protein kinase C-beta I 100.0 1.4E-42 4.7E-47  325.2  19.9  235  101-367    24-266 (353)
147 4agu_A Cyclin-dependent kinase 100.0 2.7E-42 9.1E-47  317.9  21.4  258  101-372     7-284 (311)
148 3llt_A Serine/threonine kinase 100.0   3E-42   1E-46  324.2  22.0  189  101-304    39-261 (360)
149 2a2a_A Death-associated protei 100.0 3.5E-42 1.2E-46  318.8  22.2  248  100-372    15-272 (321)
150 2ac3_A MAP kinase-interacting  100.0 6.6E-43 2.3E-47  322.7  17.1  250  102-372    18-295 (316)
151 1nxk_A MAP kinase-activated pr 100.0 1.2E-42 4.2E-47  331.3  18.9  240  103-372    68-321 (400)
152 2xir_A Vascular endothelial gr 100.0 3.7E-43 1.3E-47  324.2  14.8  250  101-378    31-309 (316)
153 2rku_A Serine/threonine-protei 100.0 4.5E-42 1.6E-46  313.9  21.9  240  101-372    19-265 (294)
154 3ll6_A Cyclin G-associated kin 100.0 1.2E-42 4.1E-47  323.4  18.3  243  101-378    32-307 (337)
155 2r5t_A Serine/threonine-protei 100.0 1.1E-42 3.9E-47  328.0  18.3  241  101-373    42-290 (373)
156 1u46_A ACK-1, activated CDC42  100.0 5.1E-43 1.7E-47  319.5  15.4  248  101-378    22-283 (291)
157 3hko_A Calcium/calmodulin-depe 100.0 6.6E-43 2.2E-47  326.7  16.5  250  101-372    30-330 (345)
158 2jam_A Calcium/calmodulin-depe 100.0 3.9E-42 1.3E-46  315.9  21.1  241  101-372    13-261 (304)
159 3v8s_A RHO-associated protein  100.0 2.9E-43 9.8E-48  335.7  13.9  243  101-372    73-329 (410)
160 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.4E-42   8E-47  339.1  20.7  242  103-368   191-439 (543)
161 4eut_A Serine/threonine-protei 100.0 1.4E-42 4.6E-47  330.8  18.4  261  101-377    13-307 (396)
162 3g33_A Cell division protein k 100.0 4.7E-42 1.6E-46  316.0  21.2  255  101-372    13-296 (308)
163 2owb_A Serine/threonine-protei 100.0 7.6E-42 2.6E-46  318.5  22.8  240  101-372    45-291 (335)
164 3e7e_A HBUB1, BUB1A, mitotic c 100.0 2.2E-42 7.5E-47  325.9  19.4  239  101-377    69-337 (365)
165 2vgo_A Serine/threonine-protei 100.0 7.3E-42 2.5E-46  311.0  22.1  240  101-372    18-262 (284)
166 2clq_A Mitogen-activated prote 100.0 2.6E-42 8.9E-47  315.4  19.0  242  102-372    27-278 (295)
167 2yfx_A Tyrosine-protein kinase 100.0 8.7E-43   3E-47  323.6  15.9  249  101-378    34-303 (327)
168 3uzp_A CKI-delta, CKID, casein 100.0 9.1E-42 3.1E-46  311.9  22.4  248  101-377    13-278 (296)
169 3bhy_A Death-associated protei 100.0 9.2E-42 3.1E-46  310.0  22.2  247  101-372     9-265 (283)
170 4hgt_A Casein kinase I isoform 100.0 6.6E-42 2.3E-46  312.7  21.3  248  101-377    13-278 (296)
171 3fme_A Dual specificity mitoge 100.0 1.5E-42 5.1E-47  316.2  16.9  245  101-372    11-266 (290)
172 4aw2_A Serine/threonine-protei 100.0 5.4E-43 1.8E-47  336.4  14.6  246  101-372    78-338 (437)
173 2yex_A Serine/threonine-protei 100.0 3.8E-42 1.3E-46  311.3  19.2  241  101-372    11-261 (276)
174 3oz6_A Mitogen-activated prote 100.0 4.8E-42 1.6E-46  326.2  20.8  189  101-304    13-233 (388)
175 2acx_A G protein-coupled recep 100.0 2.9E-42   1E-46  339.4  19.6  246  101-372   188-444 (576)
176 3eqc_A Dual specificity mitoge 100.0 3.3E-42 1.1E-46  324.0  19.2  258  101-372    37-324 (360)
177 3i6u_A CDS1, serine/threonine- 100.0   2E-42 6.9E-47  331.8  18.0  249  101-372   139-399 (419)
178 3byv_A Rhoptry kinase; malaria 100.0 1.9E-43 6.6E-48  334.6  10.6  237  102-372    78-359 (377)
179 3a7i_A MST3 kinase, serine/thr 100.0 3.3E-42 1.1E-46  316.2  18.4  238  101-372    26-270 (303)
180 4aaa_A Cyclin-dependent kinase 100.0 4.1E-42 1.4E-46  319.7  19.0  259  101-372    29-306 (331)
181 3ttj_A Mitogen-activated prote 100.0 1.5E-41 5.2E-46  329.5  23.7  249  101-372    66-355 (464)
182 1cm8_A Phosphorylated MAP kina 100.0 1.2E-41   4E-46  321.0  22.2  249  101-372    29-307 (367)
183 2h6d_A 5'-AMP-activated protei 100.0 1.2E-41   4E-46  308.2  21.0  240  101-372    15-261 (276)
184 2jii_A Serine/threonine-protei 100.0 6.2E-43 2.1E-47  328.0  13.0  249  101-377    46-334 (352)
185 2vd5_A DMPK protein; serine/th 100.0 3.4E-42 1.1E-46  328.6  18.2  245  101-372    65-327 (412)
186 3com_A Serine/threonine-protei 100.0 1.7E-41 5.7E-46  313.0  21.6  239  101-372    33-278 (314)
187 3lij_A Calcium/calmodulin depe 100.0 1.2E-41 4.1E-46  333.4  21.7  242  101-372    41-291 (494)
188 1vzo_A Ribosomal protein S6 ki 100.0 1.7E-42 5.7E-47  325.4  14.8  245  101-372    58-321 (355)
189 3mwu_A Calmodulin-domain prote 100.0 1.2E-41 4.2E-46  332.7  21.5  243  100-372    25-276 (486)
190 3lm5_A Serine/threonine-protei 100.0 3.3E-42 1.1E-46  319.8  16.3  245  101-372    33-287 (327)
191 3an0_A Dual specificity mitoge 100.0 4.7E-42 1.6E-46  320.4  17.0  243  102-372    56-310 (340)
192 3nyv_A Calmodulin-domain prote 100.0 5.5E-42 1.9E-46  335.0  18.3  244  100-372    29-281 (484)
193 2ycf_A Serine/threonine-protei 100.0 1.5E-41 5.1E-46  314.6  19.8  250  100-372    13-274 (322)
194 3rp9_A Mitogen-activated prote 100.0 1.8E-41 6.3E-46  329.1  21.4  185  101-299    57-281 (458)
195 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.8E-42 9.4E-47  320.6  14.8  250  101-372    38-318 (329)
196 2qr7_A Ribosomal protein S6 ki 100.0 2.9E-42 9.9E-47  321.9  14.7  240  101-372    26-277 (342)
197 2y4i_B KSR2, HKSR2, kinase sup 100.0 9.4E-43 3.2E-47  322.0  11.0  245  101-378    37-301 (319)
198 2xrw_A Mitogen-activated prote 100.0 4.3E-41 1.5E-45  317.7  22.4  249  101-372    29-318 (371)
199 3mi9_A Cell division protein k 100.0 3.5E-41 1.2E-45  315.9  21.6  254  101-372    21-311 (351)
200 3rgf_A Cyclin-dependent kinase 100.0 3.4E-41 1.2E-45  322.1  21.8  190  101-304    25-238 (405)
201 2j0j_A Focal adhesion kinase 1 100.0 1.7E-41 5.7E-46  341.9  20.5  244  101-377   394-649 (656)
202 3kvw_A DYRK2, dual specificity 100.0 2.4E-41 8.4E-46  325.2  20.8  189  101-304   101-301 (429)
203 3mtl_A Cell division protein k 100.0 5.1E-42 1.7E-46  318.2  15.2  252  102-372     7-281 (324)
204 1phk_A Phosphorylase kinase; g 100.0 3.7E-41 1.3E-45  308.3  20.7  249  101-372    21-283 (298)
205 3q5i_A Protein kinase; CDPK, m 100.0 3.3E-41 1.1E-45  331.0  21.8  248  101-372    40-301 (504)
206 2j7t_A Serine/threonine-protei 100.0 9.6E-42 3.3E-46  312.8  16.7  241  101-372    23-275 (302)
207 1ua2_A CAK, cell division prot 100.0 1.1E-41 3.8E-46  318.7  17.4  254  101-372    14-291 (346)
208 3q60_A ROP5B; pseudokinase, tr 100.0 3.5E-42 1.2E-46  325.2  14.0  248  101-372    66-352 (371)
209 3nsz_A CK II alpha, casein kin 100.0 3.1E-41 1.1E-45  313.4  20.1  247  101-372    40-319 (330)
210 3pg1_A Mitogen-activated prote 100.0 5.2E-41 1.8E-45  316.0  21.6  257  101-372    26-316 (362)
211 3eb0_A Putative uncharacterize 100.0 2.8E-41 9.4E-46  320.4  19.7  251  101-372    11-321 (383)
212 2x7f_A TRAF2 and NCK-interacti 100.0 2.7E-41 9.1E-46  313.3  18.8  240  101-372    28-286 (326)
213 2r3i_A Cell division protein k 100.0 4.4E-41 1.5E-45  307.9  19.9  253  101-372     7-283 (299)
214 3pfq_A PKC-B, PKC-beta, protei 100.0 3.1E-41 1.1E-45  341.0  20.6  235  101-367   345-587 (674)
215 2vwi_A Serine/threonine-protei 100.0 2.1E-42 7.1E-47  317.2  10.8  252  101-372    19-287 (303)
216 1z57_A Dual specificity protei 100.0 1.5E-40 5.2E-45  309.3  23.5  258  101-378    18-336 (339)
217 1wak_A Serine/threonine-protei 100.0 3.6E-41 1.2E-45  320.6  19.5  256  101-372    41-391 (397)
218 3n9x_A Phosphotransferase; mal 100.0 5.3E-41 1.8E-45  323.3  20.1  189  101-303    30-253 (432)
219 3sv0_A Casein kinase I-like; t 100.0 6.7E-41 2.3E-45  325.5  20.9  248  101-377    11-276 (483)
220 2wei_A Calmodulin-domain prote 100.0 7.6E-41 2.6E-45  304.8  19.9  242  101-372    26-276 (287)
221 2fst_X Mitogen-activated prote 100.0 3.5E-41 1.2E-45  317.6  18.1  249  101-372    33-311 (367)
222 2wtk_C Serine/threonine-protei 100.0 1.5E-40 5.1E-45  305.3  21.8  242  101-372     9-263 (305)
223 3qyz_A Mitogen-activated prote 100.0 7.5E-41 2.6E-45  315.3  20.2  251  101-372    31-313 (364)
224 1zy4_A Serine/threonine-protei 100.0 1.5E-40 5.2E-45  304.4  21.5  239  101-372    10-283 (303)
225 1j1b_A Glycogen synthase kinas 100.0 5.3E-41 1.8E-45  322.1  18.8  251  101-372    58-336 (420)
226 3cek_A Dual specificity protei 100.0 6.7E-41 2.3E-45  309.0  18.1  240  101-372    32-292 (313)
227 4exu_A Mitogen-activated prote 100.0 1.8E-40 6.2E-45  313.4  21.3  248  101-372    46-323 (371)
228 2pml_X PFPK7, Ser/Thr protein  100.0 1.4E-41 4.9E-46  318.0  13.5  259  101-372    35-322 (348)
229 2i6l_A Mitogen-activated prote 100.0 1.3E-40 4.5E-45  307.4  19.5  247  101-372    15-305 (320)
230 2rio_A Serine/threonine-protei 100.0 5.9E-41   2E-45  323.1  17.1  241  102-372    20-295 (434)
231 4e7w_A Glycogen synthase kinas 100.0 8.6E-41 2.9E-45  318.1  17.6  251  101-372    44-321 (394)
232 1blx_A Cyclin-dependent kinase 100.0   2E-40   7E-45  307.2  19.5  252  101-372    15-296 (326)
233 3e3p_A Protein kinase, putativ 100.0 4.4E-40 1.5E-44  309.3  21.6  257  101-372    27-314 (360)
234 2b9h_A MAP kinase FUS3, mitoge 100.0   4E-40 1.4E-44  308.7  21.1  251  101-372    15-305 (353)
235 3aln_A Dual specificity mitoge 100.0 1.1E-40 3.6E-45  309.5  16.9  247  101-372    26-285 (327)
236 1q8y_A SR protein kinase; tran 100.0 1.3E-40 4.5E-45  314.3  17.5  256  100-372    22-333 (373)
237 3fhr_A MAP kinase-activated pr 100.0 9.8E-41 3.3E-45  311.1  16.3  242  102-372    34-287 (336)
238 2vx3_A Dual specificity tyrosi 100.0 5.8E-40   2E-44  311.2  21.4  191  101-304    58-260 (382)
239 2eu9_A Dual specificity protei 100.0 1.5E-39 5.3E-44  304.6  23.4  252  101-372    23-333 (355)
240 3coi_A Mitogen-activated prote 100.0 3.9E-40 1.3E-44  309.1  18.8  248  101-372    28-305 (353)
241 2dyl_A Dual specificity mitoge 100.0 3.7E-40 1.3E-44  304.4  17.1  243  101-372    29-283 (318)
242 3a99_A Proto-oncogene serine/t 100.0 1.6E-40 5.4E-45  307.6  14.2  237  101-372    47-293 (320)
243 3p23_A Serine/threonine-protei 100.0 5.5E-40 1.9E-44  315.7  16.3  237  101-372    28-283 (432)
244 2iwi_A Serine/threonine-protei 100.0 2.4E-40 8.2E-45  305.1  13.2  238  100-372    34-283 (312)
245 3qa8_A MGC80376 protein; kinas 100.0 6.8E-40 2.3E-44  325.9  12.1  253  100-370    17-295 (676)
246 2pzi_A Probable serine/threoni 100.0 4.2E-39 1.4E-43  326.9  15.9  232  101-376    84-325 (681)
247 3m2w_A MAP kinase-activated pr 100.0 1.9E-38 6.5E-43  290.8  18.8  223  102-372    23-256 (299)
248 3uqc_A Probable conserved tran 100.0 1.8E-38 6.1E-43  289.1  17.9  228  101-378    35-264 (286)
249 3dzo_A Rhoptry kinase domain;  100.0 8.3E-39 2.8E-43  306.2  13.2  238  101-372    82-363 (413)
250 2vuw_A Serine/threonine-protei 100.0 7.7E-38 2.6E-42  291.5   7.0  245  100-371    23-329 (336)
251 4azs_A Methyltransferase WBDD; 100.0 2.2E-31 7.4E-36  263.7   9.8  186  105-301   242-437 (569)
252 3en9_A Glycoprotease, O-sialog 100.0 1.5E-29 5.2E-34  249.1   8.9  183  102-302   341-538 (540)
253 1zar_A RIO2 kinase; serine kin  99.9 3.2E-24 1.1E-28  194.2   8.0  148  102-275    95-252 (282)
254 1zth_A RIO1 serine protein kin  99.8 1.4E-19 4.9E-24  161.6  10.6  143  101-258    51-219 (258)
255 4gyi_A RIO2 kinase; protein ki  99.7 2.1E-16   7E-21  147.2   9.7  143  101-258    99-265 (397)
256 3tm0_A Aminoglycoside 3'-phosp  99.3   1E-11 3.4E-16  110.7  10.9  137  102-256    19-212 (263)
257 1nd4_A Aminoglycoside 3'-phosp  99.2 2.3E-11 7.8E-16  107.9   9.1  128  106-256    29-213 (264)
258 3dxp_A Putative acyl-COA dehyd  99.1 1.8E-10 6.2E-15  107.4   9.6  141  103-257    44-248 (359)
259 3sg8_A APH(2'')-ID; antibiotic  98.9 1.4E-09 4.7E-14   99.0   6.9  180  103-302    26-287 (304)
260 3r70_A Aminoglycoside phosphot  98.7 7.3E-08 2.5E-12   88.2  10.5  132  102-257    42-237 (320)
261 4gkh_A Aminoglycoside 3'-phosp  98.6 4.5E-07 1.5E-11   80.6  13.1  133  105-256    32-222 (272)
262 3tdw_A Gentamicin resistance p  98.5   1E-06 3.6E-11   79.9  13.0  135  103-257    25-224 (306)
263 3d1u_A Putative fructosamine-3  98.5 1.7E-06 5.7E-11   77.8  14.1   75  102-188    20-97  (288)
264 3ovc_A Hygromycin-B 4-O-kinase  98.3 5.7E-06 1.9E-10   76.9  11.6  141  103-257    47-243 (362)
265 2q83_A YTAA protein; 2635576,   98.2 1.8E-05 6.1E-10   72.6  13.1   31  226-256   221-251 (346)
266 3ats_A Putative uncharacterize  98.1 5.5E-06 1.9E-10   76.7   8.8   82  103-189    26-121 (357)
267 2olc_A MTR kinase, methylthior  97.9 6.9E-05 2.4E-09   70.4  10.8   81  103-186    36-120 (397)
268 3f7w_A Putative fructosamine-3  97.7 0.00027 9.1E-09   63.2  10.9   74  103-188    21-97  (288)
269 3jr1_A Putative fructosamine-3  97.6  0.0012   4E-08   59.8  14.8  138  103-253    42-232 (312)
270 2pyw_A Uncharacterized protein  97.6 0.00033 1.1E-08   66.3  11.6   73  226-299   231-313 (420)
271 3csv_A Aminoglycoside phosphot  97.5 0.00057 1.9E-08   62.4  10.3   32  226-257   182-217 (333)
272 2yle_A Protein spire homolog 1  97.4   0.001 3.5E-08   56.1  10.5  103  186-301    33-135 (229)
273 3dxq_A Choline/ethanolamine ki  97.2 0.00071 2.4E-08   60.8   8.1   31  226-257   172-202 (301)
274 2ppq_A HSK, HK, homoserine kin  97.2  0.0017 5.9E-08   58.7  10.2  157   89-256     7-216 (322)
275 1zyl_A Hypothetical protein YI  97.1  0.0038 1.3E-07   56.6  11.5  158   88-257    10-223 (328)
276 1nw1_A Choline kinase (49.2 KD  97.0  0.0016 5.5E-08   61.7   8.1   71  103-187    79-158 (429)
277 3feg_A Choline/ethanolamine ki  97.0  0.0022 7.4E-08   59.6   8.8  140  104-256    57-253 (379)
278 3i1a_A Spectinomycin phosphotr  96.9  0.0018 6.1E-08   59.3   7.2   32  226-257   205-236 (339)
279 2qg7_A Ethanolamine kinase PV0  96.7    0.01 3.5E-07   56.6  10.9   73  103-188   114-188 (458)
280 3c5i_A Choline kinase; choline  96.5  0.0032 1.1E-07   58.3   6.0   30  226-256   211-240 (369)
281 3f2s_A CK, chetk-alpha, cholin  95.7   0.022 7.5E-07   53.2   7.3  149  104-256    59-279 (401)
282 2ks1_B Epidermal growth factor  95.3   0.016 5.4E-07   35.2   3.2   26   44-69     13-38  (44)
283 3mes_A Choline kinase; malaria  95.2    0.16 5.6E-06   47.7  11.8   30  226-256   261-290 (424)
284 2jwa_A Receptor tyrosine-prote  94.9    0.02 6.7E-07   34.6   2.8   26   44-69     13-38  (44)
285 2l2t_A Receptor tyrosine-prote  94.3   0.027 9.3E-07   34.0   2.4   19   51-69     19-37  (44)
286 2k1k_A Ephrin type-A receptor   92.9   0.054 1.8E-06   31.7   2.0   22   44-65     12-33  (38)
287 4ann_A ESSB; membrane protein,  91.4    0.61 2.1E-05   39.1   7.5  118  159-305    43-160 (215)
288 4ano_A ESSB; membrane protein,  90.8     2.2 7.4E-05   35.9  10.3  118  159-307    48-167 (219)
289 3cxl_A N-chimerin; SH2, RHO-GA  86.3   0.089 3.1E-06   50.1  -1.3   61  102-171   147-214 (463)
290 3g15_A CK, chetk-alpha, cholin  76.7     1.3 4.5E-05   41.0   2.9   30  228-257   245-280 (401)
291 2ks1_B Epidermal growth factor  76.1     3.6 0.00012   24.7   3.6   31   45-75     10-41  (44)
292 2l2t_A Receptor tyrosine-prote  74.6     5.3 0.00018   24.0   4.1   29   47-75     11-40  (44)
293 1iij_A ERBB-2 receptor protein  67.1    0.97 3.3E-05   25.7  -0.3    7   62-68     27-33  (35)
294 3oja_A Leucine-rich immune mol  65.0    0.26 8.9E-06   47.2  -5.0   29  145-173   323-351 (487)
295 2jwa_A Receptor tyrosine-prote  64.2      11 0.00037   22.6   3.9   31   45-75     11-41  (44)
296 2knc_B Integrin beta-3; transm  54.3     9.3 0.00032   26.2   2.8   12   46-57     11-22  (79)
297 2l34_A TYRO protein tyrosine k  53.1     7.9 0.00027   21.6   1.8   21   45-65      9-29  (33)
298 2l8s_A Integrin alpha-1; trans  49.5      37  0.0013   21.3   4.6    9   49-57     13-21  (54)
299 2l8s_A Integrin alpha-1; trans  47.0      17  0.0006   22.7   2.9   20   43-62     10-30  (54)
300 1afo_A Glycophorin A; integral  45.7      22 0.00077   20.4   2.9   22   44-65     11-32  (40)
301 2knc_A Integrin alpha-IIB; tra  41.0      36  0.0012   21.3   3.7    7   50-56     17-23  (54)
302 2klu_A T-cell surface glycopro  39.8      32  0.0011   22.4   3.3    9   48-56     12-20  (70)
303 2k1a_A Integrin alpha-IIB; sin  38.8      46  0.0016   19.7   3.7   11   48-58     13-23  (42)
304 2k21_A Potassium voltage-gated  37.7      36  0.0012   25.4   3.8   26   44-69     54-79  (138)
305 2k9j_B Integrin beta-3; transm  33.7      33  0.0011   20.3   2.6   12   46-57     10-21  (43)
306 2jo1_A Phospholemman; FXYD1, N  33.4      59   0.002   21.4   3.9   13   47-59     20-32  (72)
307 2knc_B Integrin beta-3; transm  28.1      29 0.00098   23.7   1.9   17   42-58     11-27  (79)
308 2jp3_A FXYD domain-containing   26.3      49  0.0017   21.6   2.6   12   47-58     21-32  (67)
309 2x6h_A GH13170P, VPS34, phosph  25.4      43  0.0015   33.3   3.2   45  205-256   529-575 (696)
310 1q55_A EP-cadherin, C-cadherin  24.5      24 0.00083   36.3   1.4   17   45-61    707-723 (880)
311 3ls8_A Phosphatidylinositol 3-  22.8 5.3E+02   0.018   25.0  15.0   47  203-256   453-501 (614)
312 1pi7_A VPU protein, U ORF prot  20.6      97  0.0033   17.6   2.8   11   52-62     11-21  (36)

No 1  
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00  E-value=1.6e-59  Score=430.21  Aligned_cols=252  Identities=19%  Similarity=0.341  Sum_probs=206.1

Q ss_pred             HhccccccCccCCeeEEEEEe------cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEe
Q 047245           98 LANENRLLGSSPDGKYYRTVL------DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVP  171 (380)
Q Consensus        98 ~~~~~~~lg~G~~g~vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~  171 (380)
                      ...+.+.||+|+||.||+|.+      .+++.||||+++...       .....++|.+|+.++++++|||||+++|+|.
T Consensus        27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~-------~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~   99 (308)
T 4gt4_A           27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-------EGPLREEFRHEAMLRARLQHPNVVCLLGVVT   99 (308)
T ss_dssp             GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C-------CC-CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc-------ChHHHHHHHHHHHHHHhCCCCCCCCcceEEE
Confidence            334667899999999999986      356899999996522       1223478999999999999999999999999


Q ss_pred             cCCeEEEEEeecCCCCHHHHHHHhh------------hcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcE
Q 047245          172 ESSRFYLVYDYLQTGSLEDAMDRIR------------ENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNV  239 (380)
Q Consensus       172 ~~~~~~lv~e~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Ni  239 (380)
                      +.+..++|||||++|||.++|....            .....++|..+++|+.|||+||+|||   +.+|+||||||+||
T Consensus       100 ~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NI  176 (308)
T 4gt4_A          100 KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNV  176 (308)
T ss_dssp             SSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGE
T ss_pred             ECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccce
Confidence            9999999999999999999997432            12346999999999999999999999   89999999999999


Q ss_pred             EeCCCCceEEeccCCcccCC--------CCCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhcc
Q 047245          240 MLDAEFTPRLADFGLAKLMP--------GSLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEAA  310 (380)
Q Consensus       240 ll~~~~~~kl~Dfgl~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~~  310 (380)
                      |+++++.+||+|||+++...        ....||+.|||||.+.++.++.++|||||||++|||+| |..||...     
T Consensus       177 Ll~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~-----  251 (308)
T 4gt4_A          177 LVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY-----  251 (308)
T ss_dssp             EECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTC-----
T ss_pred             EECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCC-----
Confidence            99999999999999998542        23458999999999999999999999999999999999 89998642     


Q ss_pred             CCCCHHHHHHHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          311 SGGSLGRWLRHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       311 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                         ...+..........           .+.+.+++..+.+++.+||+.||++|||++||++.|+...
T Consensus       252 ---~~~~~~~~i~~~~~-----------~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~  305 (308)
T 4gt4_A          252 ---SNQDVVEMIRNRQV-----------LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG  305 (308)
T ss_dssp             ---CHHHHHHHHHTTCC-----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred             ---CHHHHHHHHHcCCC-----------CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence               11222222221110           1122345667889999999999999999999999998753


No 2  
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00  E-value=4.9e-59  Score=425.19  Aligned_cols=248  Identities=20%  Similarity=0.371  Sum_probs=203.9

Q ss_pred             cccccCccCCeeEEEEEec------CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCC
Q 047245          101 ENRLLGSSPDGKYYRTVLD------NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESS  174 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  174 (380)
                      ..+.||+|+||.||+|.+.      ++..||||+++.        ......++|.+|++++++++|||||+++|+|.+.+
T Consensus        17 l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~--------~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~   88 (299)
T 4asz_A           17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKD--------ASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD   88 (299)
T ss_dssp             EEEEEEC--CCCEEEEEECSCC----CEEEEEEEECS--------CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred             EeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCC--------CChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC
Confidence            4578999999999999863      478899999964        12344678999999999999999999999999999


Q ss_pred             eEEEEEeecCCCCHHHHHHHhh---------hcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCC
Q 047245          175 RFYLVYDYLQTGSLEDAMDRIR---------ENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEF  245 (380)
Q Consensus       175 ~~~lv~e~~~~gsL~~~l~~~~---------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~  245 (380)
                      ..++|||||++|+|.++++...         .....++|..+++|+.|+|.||+|||   +++|+||||||+|||+++++
T Consensus        89 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~  165 (299)
T 4asz_A           89 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENL  165 (299)
T ss_dssp             SEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGG
T ss_pred             EEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCC
Confidence            9999999999999999998532         22357999999999999999999999   89999999999999999999


Q ss_pred             ceEEeccCCcccCCC--------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhccCCCCHH
Q 047245          246 TPRLADFGLAKLMPG--------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEAASGGSLG  316 (380)
Q Consensus       246 ~~kl~Dfgl~~~~~~--------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~l~  316 (380)
                      .+||+|||+++....        ...||+.|||||.+.+..++.++|||||||++|||+| |+.||...        ...
T Consensus       166 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~--------~~~  237 (299)
T 4asz_A          166 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQL--------SNN  237 (299)
T ss_dssp             CEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS--------CHH
T ss_pred             cEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCC--------CHH
Confidence            999999999975432        2348999999999999999999999999999999999 89998641        112


Q ss_pred             HHHHHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          317 RWLRHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                      +..........           ...+...+..+.+++.+||+.||++|||++||++.|+++.
T Consensus       238 ~~~~~i~~~~~-----------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~  288 (299)
T 4asz_A          238 EVIECITQGRV-----------LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLA  288 (299)
T ss_dssp             HHHHHHHHTCC-----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCC-----------CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            22222221110           1122334566889999999999999999999999998863


No 3  
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00  E-value=2.3e-58  Score=426.31  Aligned_cols=248  Identities=23%  Similarity=0.375  Sum_probs=201.1

Q ss_pred             cccccCccCCeeEEEEEec------CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCC
Q 047245          101 ENRLLGSSPDGKYYRTVLD------NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESS  174 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  174 (380)
                      ..+.||+|+||.||+|.+.      ++..||||+++.        ......++|.+|+++|++++|||||+++|+|.+.+
T Consensus        45 l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~--------~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~  116 (329)
T 4aoj_A           45 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE--------ASESARQDFQREAELLTMLQHQHIVRFFGVCTEGR  116 (329)
T ss_dssp             EEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESC--------CSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred             EEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECc--------CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC
Confidence            4567999999999999864      478999999964        12344678999999999999999999999999999


Q ss_pred             eEEEEEeecCCCCHHHHHHHhhh-----------cccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCC
Q 047245          175 RFYLVYDYLQTGSLEDAMDRIRE-----------NQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDA  243 (380)
Q Consensus       175 ~~~lv~e~~~~gsL~~~l~~~~~-----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~  243 (380)
                      ..++|||||++|+|.++++....           ...+++|.+++.|+.|+|.||+|||   +++|+||||||+|||+++
T Consensus       117 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~  193 (329)
T 4aoj_A          117 PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQ  193 (329)
T ss_dssp             SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEET
T ss_pred             EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECC
Confidence            99999999999999999975321           2346999999999999999999999   899999999999999999


Q ss_pred             CCceEEeccCCcccCCC--------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhccCCCC
Q 047245          244 EFTPRLADFGLAKLMPG--------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEAASGGS  314 (380)
Q Consensus       244 ~~~~kl~Dfgl~~~~~~--------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~  314 (380)
                      ++.+||+|||+++....        ...||+.|||||.+.+..++.++|||||||++|||+| |+.||...        .
T Consensus       194 ~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~--------~  265 (329)
T 4aoj_A          194 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL--------S  265 (329)
T ss_dssp             TTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSS--------C
T ss_pred             CCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCC--------C
Confidence            99999999999986532        2358999999999999999999999999999999999 89998641        1


Q ss_pred             HHHHHHHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          315 LGRWLRHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       315 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                      ..+.........+           ...+...+..+.+++.+||+.||++|||++||++.|+.+.
T Consensus       266 ~~~~~~~i~~g~~-----------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~  318 (329)
T 4aoj_A          266 NTEAIDCITQGRE-----------LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALA  318 (329)
T ss_dssp             HHHHHHHHHHTCC-----------CCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCC-----------CCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHh
Confidence            1222222221110           1122334566889999999999999999999999998874


No 4  
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00  E-value=1.9e-57  Score=414.86  Aligned_cols=249  Identities=21%  Similarity=0.377  Sum_probs=199.4

Q ss_pred             cccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLVY  180 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  180 (380)
                      ..+.||+|+||+||+|.+.+  .||||+++...      ......+.|.+|+.++++++|||||+++|+|.+ +..++||
T Consensus        40 l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~------~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVm  110 (307)
T 3omv_A           40 LSTRIGSGSFGTVYKGKWHG--DVAVKILKVVD------PTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT  110 (307)
T ss_dssp             EEEECCCCSSSEEEEEESSS--EEEEEECCCSS------CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred             EeeEEeeCCCcEEEEEEECC--cEEEEEEEecC------CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEE
Confidence            56789999999999998753  59999987522      223446789999999999999999999999865 5689999


Q ss_pred             eecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCCC
Q 047245          181 DYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMPG  260 (380)
Q Consensus       181 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~  260 (380)
                      |||++|+|.++++.   ....++|..++.|+.|+|.||+|||   +++|+||||||+|||+++++.+||+|||+++....
T Consensus       111 Ey~~gGsL~~~l~~---~~~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~  184 (307)
T 3omv_A          111 QWCEGSSLYKHLHV---QETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR  184 (307)
T ss_dssp             ECCSSCBHHHHHHT---SCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC---
T ss_pred             EcCCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceeccc
Confidence            99999999999973   3457999999999999999999999   89999999999999999999999999999986532


Q ss_pred             --------CCcCCCcccCcccccC---CCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchh
Q 047245          261 --------SLIATSAYSAPECFQN---RSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAR  329 (380)
Q Consensus       261 --------~~~~~~~y~aPE~~~~---~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~  329 (380)
                              ...||+.|||||.+.+   ++++.++|||||||++|||+||+.||...        ............+.  
T Consensus       185 ~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~--------~~~~~~~~~~~~~~--  254 (307)
T 3omv_A          185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHI--------NNRDQIIFMVGRGY--  254 (307)
T ss_dssp             ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTC--------CCHHHHHHHHHTTC--
T ss_pred             CCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCC--------ChHHHHHHHHhcCC--
Confidence                    2359999999999863   46899999999999999999999998631        11111222111111  


Q ss_pred             HhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          330 EALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                        ..+.+  ...+.+++..+.+++.+||+.||++|||++||++.|+.|+
T Consensus       255 --~~p~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~  299 (307)
T 3omv_A          255 --ASPDL--SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ  299 (307)
T ss_dssp             --CCCCS--TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHH
T ss_pred             --CCCCc--ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence              11111  1122334567889999999999999999999999998874


No 5  
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=3.1e-56  Score=408.82  Aligned_cols=258  Identities=23%  Similarity=0.303  Sum_probs=196.7

Q ss_pred             cccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCC----eE
Q 047245          101 ENRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESS----RF  176 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~  176 (380)
                      ..+.||+|+||.||+|.+ +|+.||||++...         ......+..|+..+.+++|||||+++|+|.+.+    .+
T Consensus         7 L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~---------~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~   76 (303)
T 3hmm_A            7 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---------EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL   76 (303)
T ss_dssp             EEEEEEECSSSEEEEEEE-TTEEEEEEEECGG---------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred             EEEEEeeCCCeEEEEEEE-CCEEEEEEEECcc---------chhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEE
Confidence            356899999999999998 5899999998641         111233446777778899999999999997653    68


Q ss_pred             EEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhc-----CCCCeEecCCCCCcEEeCCCCceEEec
Q 047245          177 YLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFT-----CNPQILHYNLKPTNVMLDAEFTPRLAD  251 (380)
Q Consensus       177 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-----~~~~iiH~dlk~~Nill~~~~~~kl~D  251 (380)
                      ++|||||++|+|.++++.     ..++|..+.+++.|++.||+|||+.     ..++|+||||||+|||+++++++||+|
T Consensus        77 ~lV~Ey~~~gsL~~~l~~-----~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~D  151 (303)
T 3hmm_A           77 WLVSDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD  151 (303)
T ss_dssp             EEEEECCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECC
T ss_pred             EEEecCCCCCcHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEe
Confidence            999999999999999973     4689999999999999999999943     134999999999999999999999999


Q ss_pred             cCCcccCCC----------CCcCCCcccCcccccCC------CCCCcchhhHHHHHHHHHHhCCCCCCchhh-------h
Q 047245          252 FGLAKLMPG----------SLIATSAYSAPECFQNR------SYTDKSDIFSFGMILAVLLTGRDPTAPFFA-------E  308 (380)
Q Consensus       252 fgl~~~~~~----------~~~~~~~y~aPE~~~~~------~~~~~sDv~s~Gvil~el~tg~~p~~~~~~-------~  308 (380)
                      ||+++....          ...||+.|||||.+.+.      .++.++|||||||++|||+||..|+.....       .
T Consensus       152 FGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~  231 (303)
T 3hmm_A          152 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL  231 (303)
T ss_dssp             CTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTT
T ss_pred             CCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhc
Confidence            999975432          23599999999999764      467899999999999999999887642111       0


Q ss_pred             ccCCCCHHHHHHHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          309 AASGGSLGRWLRHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       309 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                      .........+......     +.+++.+.......+....+.+++.+||+.||++||||.||++.|+++.
T Consensus       232 ~~~~~~~~~~~~~~~~-----~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~  296 (303)
T 3hmm_A          232 VPSDPSVEEMRKVVCE-----QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS  296 (303)
T ss_dssp             SCSSCCHHHHHHHHTT-----SCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ccccchHHHHHHHHhc-----ccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence            1111122222222111     1122222222223456778899999999999999999999999999874


No 6  
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00  E-value=3.5e-55  Score=397.11  Aligned_cols=241  Identities=22%  Similarity=0.373  Sum_probs=193.7

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEec----CCe
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPE----SSR  175 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~  175 (380)
                      +.+.||+|+||.||+|.. .++..||+|++....      ......+.|.+|+.++++++|||||++++++.+    ...
T Consensus        30 ~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~------~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~  103 (290)
T 3fpq_A           30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRK------LTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKC  103 (290)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGG------SCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEE
T ss_pred             eeeEEecCcCcEEEEEEECCCCeEEEEEEEchhh------CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcE
Confidence            345699999999999987 468899999997532      233445789999999999999999999999864    346


Q ss_pred             EEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCC--eEecCCCCCcEEeCC-CCceEEecc
Q 047245          176 FYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQ--ILHYNLKPTNVMLDA-EFTPRLADF  252 (380)
Q Consensus       176 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--iiH~dlk~~Nill~~-~~~~kl~Df  252 (380)
                      +++|||||++|+|.+++..    ...+++..+..++.||+.||+|||   +++  |+||||||+|||+++ ++.+||+||
T Consensus       104 ~~lvmEy~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DF  176 (290)
T 3fpq_A          104 IVLVTELMTSGTLKTYLKR----FKVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDL  176 (290)
T ss_dssp             EEEEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCT
T ss_pred             EEEEEeCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeC
Confidence            8999999999999999974    457999999999999999999999   766  999999999999985 789999999


Q ss_pred             CCcccCCCC----CcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcch
Q 047245          253 GLAKLMPGS----LIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEA  328 (380)
Q Consensus       253 gl~~~~~~~----~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~  328 (380)
                      |+|+.....    ..||+.|||||.+.+ +++.++|||||||++|||+||+.||...       ..............  
T Consensus       177 Gla~~~~~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~-------~~~~~~~~~i~~~~--  246 (290)
T 3fpq_A          177 GLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSEC-------QNAAQIYRRVTSGV--  246 (290)
T ss_dssp             TGGGGCCTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTC-------SSHHHHHHHHTTTC--
T ss_pred             cCCEeCCCCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCC-------CcHHHHHHHHHcCC--
Confidence            999865543    359999999998865 6999999999999999999999998531       11222222221111  


Q ss_pred             hHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          329 REALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                          .+    ...+...+..+.+++.+||+.||++|||++|+++
T Consensus       247 ----~~----~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          247 ----KP----ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             ----CC----GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ----CC----CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                01    1111122345789999999999999999999975


No 7  
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00  E-value=7.7e-55  Score=403.30  Aligned_cols=242  Identities=24%  Similarity=0.396  Sum_probs=197.0

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++.. .+|+.||||++....      ......+.+.+|++++++++|||||++++++.+.+..|+|
T Consensus        28 ~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~------~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiV  101 (350)
T 4b9d_A           28 RLQKIGEGSFGKAILVKSTEDGRQYVIKEINISR------MSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIV  101 (350)
T ss_dssp             EEEEC------CEEEEEETTTCCEEEEEEEECTT------SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             EeEEEecCCCeEEEEEEECCCCCEEEEEEEehHH------CCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence            346799999999999996 579999999997532      2234467899999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      ||||+||+|.+++..  .....+++.....++.||+.||+|||   +++|+||||||+|||++.++.+||+|||+++...
T Consensus       102 mEy~~gg~L~~~i~~--~~~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~  176 (350)
T 4b9d_A          102 MDYCEGGDLFKRINA--QKGVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLN  176 (350)
T ss_dssp             EECCTTCBHHHHHHH--TTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCC
T ss_pred             EeCCCCCcHHHHHHH--cCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeec
Confidence            999999999999974  22446789999999999999999999   8999999999999999999999999999999775


Q ss_pred             CC------CcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhhc
Q 047245          260 GS------LIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREALD  333 (380)
Q Consensus       260 ~~------~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  333 (380)
                      ..      ..||+.|||||.+.+..|+.++|||||||++|||++|+.||..        .+..+..........      
T Consensus       177 ~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~--------~~~~~~~~~i~~~~~------  242 (350)
T 4b9d_A          177 STVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA--------GSMKNLVLKIISGSF------  242 (350)
T ss_dssp             HHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCC--------SSHHHHHHHHHHTCC------
T ss_pred             CCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC--------cCHHHHHHHHHcCCC------
Confidence            42      3599999999999999999999999999999999999999963        122333333222110      


Q ss_pred             hhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          334 RSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                           ...+...+..+.+|+.+||+.||++|||++|+++
T Consensus       243 -----~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  276 (350)
T 4b9d_A          243 -----PPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE  276 (350)
T ss_dssp             -----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             -----CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                 0112234456889999999999999999999975


No 8  
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00  E-value=6.2e-55  Score=402.15  Aligned_cols=239  Identities=23%  Similarity=0.284  Sum_probs=196.2

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++.. .+|+.||||+++...             ...+|+.++++++|||||++++++.+.+..|+|
T Consensus        62 ~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~-------------~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~iv  128 (336)
T 4g3f_A           62 HQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-------------FRVEELVACAGLSSPRIVPLYGAVREGPWVNIF  128 (336)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-------------CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             eCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH-------------hHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            345799999999999996 568999999997521             123699999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCC-ceEEeccCCcccC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEF-TPRLADFGLAKLM  258 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~-~~kl~Dfgl~~~~  258 (380)
                      ||||+||+|.++++.    ...+++.....++.|++.||+|||   +++|+||||||+|||++.++ .+||+|||+++..
T Consensus       129 mEy~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~  201 (336)
T 4g3f_A          129 MELLEGGSLGQLIKQ----MGCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCL  201 (336)
T ss_dssp             ECCCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC
T ss_pred             EeccCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEc
Confidence            999999999999974    347999999999999999999999   99999999999999999987 6999999999865


Q ss_pred             CC-----------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcc
Q 047245          259 PG-----------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGE  327 (380)
Q Consensus       259 ~~-----------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~  327 (380)
                      ..           ...||+.|||||.+.+.+++.++|||||||++|||++|+.||...    ......    ........
T Consensus       202 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~----~~~~~~----~~i~~~~~  273 (336)
T 4g3f_A          202 QPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQY----FRGPLC----LKIASEPP  273 (336)
T ss_dssp             ------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTT----CCSCCH----HHHHHSCC
T ss_pred             cCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCC----CHHHHH----HHHHcCCC
Confidence            32           135999999999999999999999999999999999999999642    111111    11111110


Q ss_pred             hhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhc
Q 047245          328 AREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQ  376 (380)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~  376 (380)
                      ..         ...+...+..+.+++.+||+.||++|||+.|+++.|..
T Consensus       274 ~~---------~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~  313 (336)
T 4g3f_A          274 PI---------REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGK  313 (336)
T ss_dssp             GG---------GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             Cc---------hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHH
Confidence            00         01122345568899999999999999999999887754


No 9  
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00  E-value=1e-54  Score=401.86  Aligned_cols=238  Identities=19%  Similarity=0.343  Sum_probs=197.7

Q ss_pred             ccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEEE
Q 047245          102 NRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLVY  180 (380)
Q Consensus       102 ~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  180 (380)
                      .+.||+|+||.||+|.. .+|+.||||++......        ..+.+.+|+.+|++++|||||++++++.+.+..|+||
T Consensus        79 ~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~--------~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivm  150 (346)
T 4fih_A           79 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ--------RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM  150 (346)
T ss_dssp             EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS--------SGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             eEEeecCcCeEEEEEEECCCCCEEEEEEEecCchh--------HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            35699999999999997 47999999999753221        1245789999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCCC
Q 047245          181 DYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMPG  260 (380)
Q Consensus       181 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~  260 (380)
                      |||++|+|.+++..     ..+++..+..++.||+.||+|||   +++|+||||||+|||++.++.+||+|||+++....
T Consensus       151 Ey~~gg~L~~~l~~-----~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~  222 (346)
T 4fih_A          151 EFLEGGALTDIVTH-----TRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK  222 (346)
T ss_dssp             CCCTTEEHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             eCCCCCcHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCC
Confidence            99999999999873     36899999999999999999999   89999999999999999999999999999986542


Q ss_pred             ------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhhch
Q 047245          261 ------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREALDR  334 (380)
Q Consensus       261 ------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  334 (380)
                            ..+||+.|||||++.+..|+.++|||||||++|||++|+.||...        ...+........      ..+
T Consensus       223 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~--------~~~~~~~~i~~~------~~~  288 (346)
T 4fih_A          223 EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE--------PPLKAMKMIRDN------LPP  288 (346)
T ss_dssp             SSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--------CHHHHHHHHHHS------SCC
T ss_pred             CCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc--------CHHHHHHHHHcC------CCC
Confidence                  346999999999999999999999999999999999999998631        112222222111      111


Q ss_pred             hccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          335 SILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       335 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      .+   ......+..+.+|+.+||+.||++|||++|+++
T Consensus       289 ~~---~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~  323 (346)
T 4fih_A          289 RL---KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  323 (346)
T ss_dssp             CC---SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CC---CccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            11   111234556889999999999999999999875


No 10 
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00  E-value=6.3e-55  Score=406.53  Aligned_cols=250  Identities=23%  Similarity=0.351  Sum_probs=201.5

Q ss_pred             ccccccCccCCeeEEEEEec------CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCC-CCcceeeEEEec
Q 047245          100 NENRLLGSSPDGKYYRTVLD------NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRH-RNLMSLRAYVPE  172 (380)
Q Consensus       100 ~~~~~lg~G~~g~vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~  172 (380)
                      ...+.||+|+||.||+|...      .++.||||++...       ......+.|.+|+.+|.+++| ||||+++|+|.+
T Consensus        67 ~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~-------~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~  139 (353)
T 4ase_A           67 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG-------ATHSEHRALMSELKILIHIGHHLNVVNLLGACTK  139 (353)
T ss_dssp             EEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTT-------CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECC
T ss_pred             EEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccc-------cChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEe
Confidence            35678999999999999863      2357999998642       123345789999999999965 999999999966


Q ss_pred             -CCeEEEEEeecCCCCHHHHHHHhhhc------------ccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcE
Q 047245          173 -SSRFYLVYDYLQTGSLEDAMDRIREN------------QLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNV  239 (380)
Q Consensus       173 -~~~~~lv~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Ni  239 (380)
                       ++.+++|||||++|+|.++|+..+..            ...++|..++.++.|||.||+|||   +++||||||||+||
T Consensus       140 ~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHRDLK~~NI  216 (353)
T 4ase_A          140 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNI  216 (353)
T ss_dssp             TTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGE
T ss_pred             cCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecCccCccce
Confidence             45789999999999999999864321            345899999999999999999999   89999999999999


Q ss_pred             EeCCCCceEEeccCCcccCCCC--------CcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhcc
Q 047245          240 MLDAEFTPRLADFGLAKLMPGS--------LIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEAA  310 (380)
Q Consensus       240 ll~~~~~~kl~Dfgl~~~~~~~--------~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~~  310 (380)
                      |+++++.+||+|||+++.....        ..||+.|||||.+.+..++.++|||||||++|||+| |+.||...     
T Consensus       217 Ll~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~-----  291 (353)
T 4ase_A          217 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV-----  291 (353)
T ss_dssp             EECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC-----
T ss_pred             eeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCC-----
Confidence            9999999999999999875432        247899999999999999999999999999999998 99998631     


Q ss_pred             CCCCHHHHHHHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhcc
Q 047245          311 SGGSLGRWLRHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQL  377 (380)
Q Consensus       311 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l  377 (380)
                         .....+......+.     .     ...+...+..+.+++.+||+.||++|||++||++.|+++
T Consensus       292 ---~~~~~~~~~i~~g~-----~-----~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~l  345 (353)
T 4ase_A          292 ---KIDEEFCRRLKEGT-----R-----MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL  345 (353)
T ss_dssp             ---CCSHHHHHHHHHTC-----C-----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ---CHHHHHHHHHHcCC-----C-----CCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence               00111111111111     0     111223455688999999999999999999999999876


No 11 
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00  E-value=9.4e-54  Score=389.78  Aligned_cols=239  Identities=20%  Similarity=0.318  Sum_probs=199.2

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++.. .+|+.||+|++.....     ......+.+.+|++++++++|||||++++++.+.+..|+|
T Consensus        36 i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~-----~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yiv  110 (311)
T 4aw0_A           36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHI-----IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG  110 (311)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             EEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHC-----CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            567899999999999996 5789999999975211     1122346789999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||+++|+|.+++..    ...+++.....++.||+.||+|||   +++|+||||||+|||++.++.+||+|||+++...
T Consensus       111 mEy~~gG~L~~~i~~----~~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~  183 (311)
T 4aw0_A          111 LSYAKNGELLKYIRK----IGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS  183 (311)
T ss_dssp             ECCCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecC
Confidence            999999999999974    347999999999999999999999   8999999999999999999999999999998653


Q ss_pred             C--------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHh
Q 047245          260 G--------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREA  331 (380)
Q Consensus       260 ~--------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  331 (380)
                      .        ..+||+.|||||.+.+..++.++||||+||++|||++|+.||...        +............     
T Consensus       184 ~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~--------~~~~~~~~i~~~~-----  250 (311)
T 4aw0_A          184 PESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG--------NEGLIFAKIIKLE-----  250 (311)
T ss_dssp             TTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHTC-----
T ss_pred             CCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC--------CHHHHHHHHHcCC-----
Confidence            1        246999999999999999999999999999999999999999631        2222222222211     


Q ss_pred             hchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHH
Q 047245          332 LDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELV  371 (380)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl  371 (380)
                        .     ..+...+..+.+++.+||+.||++|||++|++
T Consensus       251 --~-----~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~  283 (311)
T 4aw0_A          251 --Y-----DFPEKFFPKARDLVEKLLVLDATKRLGCEEME  283 (311)
T ss_dssp             --C-----CCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred             --C-----CCCcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence              0     11122345678999999999999999999863


No 12 
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=8e-53  Score=378.43  Aligned_cols=239  Identities=24%  Similarity=0.377  Sum_probs=187.7

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++.. .+|+.||+|++......     .......+.+|++++++++|||||++++++.+.+..++|
T Consensus        17 i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~-----~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv   91 (275)
T 3hyh_A           17 IVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLA-----KSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV   91 (275)
T ss_dssp             EEEEEEC---CCEEEEECTTTCCEEEEEEEECC-----------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             EEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcC-----CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence            457899999999999986 57999999999753221     122346789999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||+ +|+|.+++..    ...+++.....++.|++.||+|||   +++|+||||||+|||+++++.+||+|||+++...
T Consensus        92 mEy~-~g~L~~~l~~----~~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~  163 (275)
T 3hyh_A           92 IEYA-GNELFDYIVQ----RDKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT  163 (275)
T ss_dssp             EECC-CEEHHHHHHH----SCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC----
T ss_pred             EeCC-CCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCeecC
Confidence            9999 6899999874    457999999999999999999999   8999999999999999999999999999998654


Q ss_pred             C-----CCcCCCcccCcccccCCCC-CCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhhc
Q 047245          260 G-----SLIATSAYSAPECFQNRSY-TDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREALD  333 (380)
Q Consensus       260 ~-----~~~~~~~y~aPE~~~~~~~-~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  333 (380)
                      .     ...||+.|+|||.+.+..+ +.++||||+||++|||++|+.||..        .+............       
T Consensus       164 ~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~--------~~~~~~~~~i~~~~-------  228 (275)
T 3hyh_A          164 DGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD--------ESIPVLFKNISNGV-------  228 (275)
T ss_dssp             -----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHTC-------
T ss_pred             CCCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCC--------CCHHHHHHHHHcCC-------
Confidence            3     3469999999999998886 5799999999999999999999963        12233333222211       


Q ss_pred             hhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          334 RSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      .     ..+...+..+.+++.+||+.||++|||++|+++
T Consensus       229 ~-----~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~  262 (275)
T 3hyh_A          229 Y-----TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             C-----CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             C-----CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            0     111223455789999999999999999999986


No 13 
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00  E-value=2.3e-53  Score=402.29  Aligned_cols=238  Identities=19%  Similarity=0.343  Sum_probs=197.4

Q ss_pred             ccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEEE
Q 047245          102 NRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLVY  180 (380)
Q Consensus       102 ~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  180 (380)
                      .+.||+|+||.||+|.. .+|+.||||++......        ..+.+.+|+.+|++++|||||++++++.+.+.+|+||
T Consensus       156 ~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~--------~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVm  227 (423)
T 4fie_A          156 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ--------RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM  227 (423)
T ss_dssp             EEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS--------SGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             eeEeccCcCcEEEEEEECCCCCEEEEEEEeccchh--------HHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEE
Confidence            45799999999999997 56999999999753221        1256789999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCCC
Q 047245          181 DYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMPG  260 (380)
Q Consensus       181 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~  260 (380)
                      |||++|+|.+++..     ..+++..+..++.||+.||+|||   +++|+||||||+|||++.++.+||+|||+++....
T Consensus       228 Ey~~gG~L~~~i~~-----~~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~  299 (423)
T 4fie_A          228 EFLEGGALTDIVTH-----TRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK  299 (423)
T ss_dssp             ECCTTEEHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCS
T ss_pred             eCCCCCcHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCC
Confidence            99999999999863     35899999999999999999999   89999999999999999999999999999986542


Q ss_pred             ------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhhch
Q 047245          261 ------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREALDR  334 (380)
Q Consensus       261 ------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  334 (380)
                            ..+||+.|||||++.+..|+.++|||||||++|||++|+.||...        ...+........      ..+
T Consensus       300 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~--------~~~~~~~~i~~~------~~~  365 (423)
T 4fie_A          300 EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE--------PPLKAMKMIRDN------LPP  365 (423)
T ss_dssp             SCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--------CHHHHHHHHHHS------CCC
T ss_pred             CCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc--------CHHHHHHHHHcC------CCC
Confidence                  346999999999999999999999999999999999999998531        112222222111      111


Q ss_pred             hccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          335 SILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       335 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      .+   ......+..+.+|+.+||+.||++|||++|+++
T Consensus       366 ~~---~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~  400 (423)
T 4fie_A          366 RL---KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  400 (423)
T ss_dssp             CC---SCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CC---cccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            11   111223456889999999999999999999875


No 14 
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00  E-value=3.2e-53  Score=386.17  Aligned_cols=235  Identities=24%  Similarity=0.306  Sum_probs=188.0

Q ss_pred             ccccccCccCCeeEEEEEe----cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCe
Q 047245          100 NENRLLGSSPDGKYYRTVL----DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSR  175 (380)
Q Consensus       100 ~~~~~lg~G~~g~vy~~~~----~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  175 (380)
                      ...+.||+|+||.||++..    ..++.||+|++........      ....+.+|++++++++|||||++++++.+.+.
T Consensus        27 ~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~------~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~  100 (304)
T 3ubd_A           27 ELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR------DRVRTKMERDILVEVNHPFIVKLHYAFQTEGK  100 (304)
T ss_dssp             EEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEE------ECC------CCCCCCCCTTEECEEEEEEETTE
T ss_pred             EEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChH------HHHHHHHHHHHHHHCCCCCCCeEEEEEEECCE
Confidence            3557899999999999985    2478999999975321111      12457789999999999999999999999999


Q ss_pred             EEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCc
Q 047245          176 FYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLA  255 (380)
Q Consensus       176 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~  255 (380)
                      .|+|||||+||+|.+++..    ...+++.....++.|++.||+|||   +++|+||||||+|||++.++.+||+|||++
T Consensus       101 ~~ivmEy~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla  173 (304)
T 3ubd_A          101 LYLILDFLRGGDLFTRLSK----EVMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLS  173 (304)
T ss_dssp             EEEEECCCTTCEEHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEE
T ss_pred             EEEEEEcCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEecccccc
Confidence            9999999999999999975    347999999999999999999999   899999999999999999999999999999


Q ss_pred             ccCC------CCCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchh
Q 047245          256 KLMP------GSLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAR  329 (380)
Q Consensus       256 ~~~~------~~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~  329 (380)
                      +...      ....||+.|||||.+.+..++.++||||+||++|||++|+.||...        +..+.........   
T Consensus       174 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~--------~~~~~~~~i~~~~---  242 (304)
T 3ubd_A          174 KESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK--------DRKETMTMILKAK---  242 (304)
T ss_dssp             EC-----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHCC---
T ss_pred             eeccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCc--------CHHHHHHHHHcCC---
Confidence            8643      2346999999999999999999999999999999999999999631        2222222222111   


Q ss_pred             HhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCH
Q 047245          330 EALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSS  367 (380)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~  367 (380)
                               ...+...+..+.+++.+||+.||++|||+
T Consensus       243 ---------~~~p~~~s~~~~~li~~~L~~dP~~R~ta  271 (304)
T 3ubd_A          243 ---------LGMPQFLSPEAQSLLRMLFKRNPANRLGA  271 (304)
T ss_dssp             ---------CCCCTTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred             ---------CCCCCcCCHHHHHHHHHHcccCHHHCCCC
Confidence                     01122344568899999999999999995


No 15 
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00  E-value=1.1e-51  Score=377.01  Aligned_cols=240  Identities=23%  Similarity=0.352  Sum_probs=184.6

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCC-----
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESS-----  174 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----  174 (380)
                      ..+.||+|+||.||++.. .+|+.||||++....       .+...+.+.+|++++++++|||||++++++.+.+     
T Consensus         9 ~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-------~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~   81 (299)
T 4g31_A            9 PIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-------RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKL   81 (299)
T ss_dssp             EEEEEEECC--EEEEEEETTTCCEEEEEEEEECS-------SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-----
T ss_pred             EeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC-------CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccc
Confidence            456899999999999986 578999999997521       2334578899999999999999999999986543     


Q ss_pred             -------eEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCce
Q 047245          175 -------RFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTP  247 (380)
Q Consensus       175 -------~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~  247 (380)
                             ..|+|||||++|+|.+++.... .....++...+.++.|++.||+|||   +++|+||||||+|||++.++.+
T Consensus        82 ~~~~~~~~l~ivmE~~~gg~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~v  157 (299)
T 4g31_A           82 QPSSPKVYLYIQMQLCRKENLKDWMNGRC-TIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVV  157 (299)
T ss_dssp             -----CEEEEEEEECCCSCCHHHHHHTCC-SGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCE
T ss_pred             cccCCCcEEEEEEecCCCCcHHHHHHhcC-CCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcE
Confidence                   3699999999999999997422 2234677788999999999999999   8999999999999999999999


Q ss_pred             EEeccCCcccCCC------------------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhc
Q 047245          248 RLADFGLAKLMPG------------------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEA  309 (380)
Q Consensus       248 kl~Dfgl~~~~~~------------------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~  309 (380)
                      ||+|||+++....                  ..+||+.|||||.+.+..++.++|||||||++|||++   ||...... 
T Consensus       158 Kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~-  233 (299)
T 4g31_A          158 KVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMER-  233 (299)
T ss_dssp             EECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHH-
T ss_pred             EEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHH-
Confidence            9999999986542                  1259999999999999999999999999999999996   76431100 


Q ss_pred             cCCCCHHHHHHHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          310 ASGGSLGRWLRHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       310 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                            ........ ...          .+.........+.+++.+||+.||++|||+.|+++
T Consensus       234 ------~~~~~~~~-~~~----------~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  279 (299)
T 4g31_A          234 ------VRTLTDVR-NLK----------FPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE  279 (299)
T ss_dssp             ------HHHHHHHH-TTC----------CCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ------HHHHHHHh-cCC----------CCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence                  00001100 000          01111233445678999999999999999999986


No 16 
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00  E-value=5.2e-48  Score=365.89  Aligned_cols=250  Identities=22%  Similarity=0.338  Sum_probs=191.8

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEec------C
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPE------S  173 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~  173 (380)
                      ..+.||+|+||.||+|.. .+|+.||||++....      ......+.+.+|+++|++++|||||++++++..      .
T Consensus        58 ~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~------~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~  131 (398)
T 4b99_A           58 IIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAF------DVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEF  131 (398)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEETTTT------SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTC
T ss_pred             EEEEEecccCeEEEEEEECCCCCEEEEEEECccc------cchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccC
Confidence            346899999999999996 579999999996422      123345678899999999999999999999753      3


Q ss_pred             CeEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccC
Q 047245          174 SRFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFG  253 (380)
Q Consensus       174 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfg  253 (380)
                      +..|+|||||+ |+|.+++..    ...+++..+..++.||+.||+|||   +.+|+||||||+|||++.++.+||+|||
T Consensus       132 ~~~~ivmE~~~-g~L~~~i~~----~~~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFG  203 (398)
T 4b99_A          132 KSVYVVLDLME-SDLHQIIHS----SQPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFG  203 (398)
T ss_dssp             CCEEEEEECCS-EEHHHHHTS----SSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCT
T ss_pred             CEEEEEEeCCC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecc
Confidence            67899999996 689999863    457999999999999999999999   8999999999999999999999999999


Q ss_pred             CcccCCC----------CCcCCCcccCcccccCC-CCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHH
Q 047245          254 LAKLMPG----------SLIATSAYSAPECFQNR-SYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHL  322 (380)
Q Consensus       254 l~~~~~~----------~~~~~~~y~aPE~~~~~-~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~  322 (380)
                      +++....          ...||+.|+|||++.+. .++.++||||+||++|||++|+.||...        +..+.....
T Consensus       204 la~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~--------~~~~~l~~I  275 (398)
T 4b99_A          204 MARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK--------NYVHQLQLI  275 (398)
T ss_dssp             TCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCS--------SHHHHHHHH
T ss_pred             eeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCC--------CHHHHHHHH
Confidence            9986532          34699999999998875 5689999999999999999999999631        111111111


Q ss_pred             Hh-hcc-------------hhHhhchhccCCccc-----HHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          323 QH-AGE-------------AREALDRSILGEEVE-----EDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       323 ~~-~~~-------------~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      .. .+.             ....+...-.....+     ......+.+|+.+||+.||++|||++|+++
T Consensus       276 ~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  344 (398)
T 4b99_A          276 MMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR  344 (398)
T ss_dssp             HHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            00 000             000000000000000     112356789999999999999999999875


No 17 
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00  E-value=1.5e-48  Score=362.26  Aligned_cols=282  Identities=32%  Similarity=0.553  Sum_probs=234.3

Q ss_pred             CCChHHHHHHHhc--cccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcce
Q 047245           88 KIDPKTLQAALAN--ENRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMS  165 (380)
Q Consensus        88 ~~~~~~l~~~~~~--~~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~  165 (380)
                      .++..+++....+  ..+.||+|+||.||++...+|+.||+|++......       .....+.+|+.++++++||||++
T Consensus        19 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-------~~~~~~~~e~~~l~~l~h~~iv~   91 (326)
T 3uim_A           19 RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQ-------GGELQFQTEVEMISMAVHRNLLR   91 (326)
T ss_dssp             ECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC------------CCCHHHHHHHGGGTCCCTTBCC
T ss_pred             eecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCc-------hHHHHHHHHHHHHHhccCCCccc
Confidence            4566677666655  45789999999999999888999999999753211       11136889999999999999999


Q ss_pred             eeEEEecCCeEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCC
Q 047245          166 LRAYVPESSRFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEF  245 (380)
Q Consensus       166 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~  245 (380)
                      +++++.+.+..++||||+++|+|.+++.........++|..+..++.|++.||+|||+.+..+++||||||+|||+++++
T Consensus        92 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~  171 (326)
T 3uim_A           92 LRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEF  171 (326)
T ss_dssp             CCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTC
T ss_pred             eEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCC
Confidence            99999999999999999999999999986544555699999999999999999999944334999999999999999999


Q ss_pred             ceEEeccCCcccCCC-------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHH
Q 047245          246 TPRLADFGLAKLMPG-------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRW  318 (380)
Q Consensus       246 ~~kl~Dfgl~~~~~~-------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~  318 (380)
                      .+||+|||+++....       ...||+.|+|||.+.+..++.++||||||+++|||++|..||+.............+|
T Consensus       172 ~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~  251 (326)
T 3uim_A          172 EAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDW  251 (326)
T ss_dssp             CEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHH
T ss_pred             CEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHH
Confidence            999999999986542       2348999999999998899999999999999999999999997543344445567777


Q ss_pred             HHHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhcc
Q 047245          319 LRHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQL  377 (380)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l  377 (380)
                      ..............+..+.. ....+....+.+++.+||+.||.+|||++|+++.|++.
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~  309 (326)
T 3uim_A          252 VKGLLKEKKLEALVDVDLQG-NYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD  309 (326)
T ss_dssp             HTTTTSSCCSTTSSCTTCTT-SCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred             HHHHhhchhhhhhcChhhcc-ccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence            77766666666666665543 34577889999999999999999999999999999864


No 18 
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00  E-value=1.4e-47  Score=358.99  Aligned_cols=184  Identities=23%  Similarity=0.360  Sum_probs=161.0

Q ss_pred             cccccCccCCeeEEEEEe----cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcC-CCCCcceeeEEEecCCe
Q 047245          101 ENRLLGSSPDGKYYRTVL----DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASL-RHRNLMSLRAYVPESSR  175 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~----~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~  175 (380)
                      ..+.||+|+||+||+|..    ..++.||+|++....          ...++.+|+++++.+ +||||+++++++.+.+.
T Consensus        25 i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~----------~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~   94 (361)
T 4f9c_A           25 IEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS----------HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDH   94 (361)
T ss_dssp             EEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS----------CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTE
T ss_pred             EEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc----------CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCE
Confidence            456899999999999985    246789999986421          124577899999999 69999999999999999


Q ss_pred             EEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCC-CceEEeccCC
Q 047245          176 FYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAE-FTPRLADFGL  254 (380)
Q Consensus       176 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~-~~~kl~Dfgl  254 (380)
                      .++||||+++|+|.+++.       .+++..+..++.|++.||+|||   +.+|+||||||+|||++.+ +.+||+|||+
T Consensus        95 ~~lvmE~~~g~~L~~~~~-------~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFGl  164 (361)
T 4f9c_A           95 VVIAMPYLEHESFLDILN-------SLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGL  164 (361)
T ss_dssp             EEEEEECCCCCCHHHHHT-------TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred             EEEEEeCCCcccHHHHHc-------CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCCC
Confidence            999999999999999885       4889999999999999999999   9999999999999999877 7999999999


Q ss_pred             cccCCC----------------------------------CCcCCCcccCcccccCC-CCCCcchhhHHHHHHHHHHhCC
Q 047245          255 AKLMPG----------------------------------SLIATSAYSAPECFQNR-SYTDKSDIFSFGMILAVLLTGR  299 (380)
Q Consensus       255 ~~~~~~----------------------------------~~~~~~~y~aPE~~~~~-~~~~~sDv~s~Gvil~el~tg~  299 (380)
                      |+....                                  ..+||+.|+|||.+.+. .++.++||||+||++|||++|+
T Consensus       165 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~  244 (361)
T 4f9c_A          165 AQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGR  244 (361)
T ss_dssp             CEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTC
T ss_pred             CcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCC
Confidence            974321                                  12599999999999875 4899999999999999999999


Q ss_pred             CCCCc
Q 047245          300 DPTAP  304 (380)
Q Consensus       300 ~p~~~  304 (380)
                      .||..
T Consensus       245 ~Pf~~  249 (361)
T 4f9c_A          245 YPFYK  249 (361)
T ss_dssp             SSSSC
T ss_pred             CCCCC
Confidence            99953


No 19 
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00  E-value=1.3e-47  Score=355.32  Aligned_cols=264  Identities=29%  Similarity=0.521  Sum_probs=222.1

Q ss_pred             cccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLVY  180 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  180 (380)
                      ..+.||+|+||.||+|...+|..||+|++....        ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus        43 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  114 (321)
T 2qkw_B           43 HKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES--------SQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIY  114 (321)
T ss_dssp             CCCCSCBCSSSEEEEEECTTCCEEEEEECCSCC--------SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEE
T ss_pred             ccceeecCCCeeEEEEEECCCCEEEEEEecccC--------hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEE
Confidence            356899999999999998889999999886521        123467899999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCCC
Q 047245          181 DYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMPG  260 (380)
Q Consensus       181 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~  260 (380)
                      ||+++|+|.+++.........++|..++.++.|++.||+|||   +.+++||||||+||+++.++.+||+|||+++....
T Consensus       115 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  191 (321)
T 2qkw_B          115 KYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTE  191 (321)
T ss_dssp             ECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEECCCTTCEECSS
T ss_pred             EcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence            999999999998753333446999999999999999999999   89999999999999999999999999999975432


Q ss_pred             --------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhh
Q 047245          261 --------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREAL  332 (380)
Q Consensus       261 --------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  332 (380)
                              ...|++.|+|||.+.+..++.++||||||+++|||++|+.||....  .........|.......+...+.+
T Consensus       192 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  269 (321)
T 2qkw_B          192 LDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSL--PREMVNLAEWAVESHNNGQLEQIV  269 (321)
T ss_dssp             SSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSS--SSSCCCHHHHTHHHHTTTCCCSSS
T ss_pred             ccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccC--cHHHHHHHHHhhhccccccHHHhc
Confidence                    1237899999999998999999999999999999999999986422  223345667766666666655666


Q ss_pred             chhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          333 DRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                      ++.... ....+....+.+++.+||+.||++|||++|+++.|+.+.
T Consensus       270 ~~~~~~-~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l  314 (321)
T 2qkw_B          270 DPNLAD-KIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYAL  314 (321)
T ss_dssp             SSSCTT-CSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             Chhhcc-ccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence            555433 345678889999999999999999999999999998763


No 20 
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00  E-value=5.5e-47  Score=374.41  Aligned_cols=245  Identities=21%  Similarity=0.265  Sum_probs=193.5

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..++||+|+||.||++.. .+|+.||+|++......  .............++.+++.++|||||++++++.+.+.+|+|
T Consensus       193 i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~--~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylV  270 (689)
T 3v5w_A          193 VHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK--MKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFI  270 (689)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH--HTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEE
T ss_pred             EEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcc--hhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEE
Confidence            347899999999999997 56999999999752210  111122233344567788889999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||++||+|.+++..    ...+++.....++.||+.||+|||   +.+|+||||||+|||++.+|++||+|||+|+...
T Consensus       271 mEy~~GGdL~~~l~~----~~~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~  343 (689)
T 3v5w_A          271 LDLMNGGDLHYHLSQ----HGVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFS  343 (689)
T ss_dssp             ECCCCSCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred             EecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEecccceeeecC
Confidence            999999999999974    356999999999999999999999   9999999999999999999999999999998654


Q ss_pred             C----CCcCCCcccCcccccC-CCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhhch
Q 047245          260 G----SLIATSAYSAPECFQN-RSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREALDR  334 (380)
Q Consensus       260 ~----~~~~~~~y~aPE~~~~-~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  334 (380)
                      .    ..+||+.|||||++.. ..|+.++|+||+||++|||++|..||...     ...............         
T Consensus       344 ~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~-----~~~~~~~i~~~i~~~---------  409 (689)
T 3v5w_A          344 KKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH-----KTKDKHEIDRMTLTM---------  409 (689)
T ss_dssp             SCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGG-----GCCCHHHHHHHHHHC---------
T ss_pred             CCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC-----ChHHHHHHHHhhcCC---------
Confidence            3    3569999999999975 57999999999999999999999999631     111111111111111         


Q ss_pred             hccCCcccHHHHHHHHHHHHHcccCCCCCCCC-----HHhHH
Q 047245          335 SILGEEVEEDEMLMAVRIAVVCLSDSPADRPS-----SDELV  371 (380)
Q Consensus       335 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs-----~~evl  371 (380)
                      .   ...+...+..+.+|+.+||+.||.+|++     ++|++
T Consensus       410 ~---~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~  448 (689)
T 3v5w_A          410 A---VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVK  448 (689)
T ss_dssp             C---CCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHT
T ss_pred             C---CCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHh
Confidence            0   1112234456889999999999999998     46654


No 21 
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00  E-value=7.7e-47  Score=374.40  Aligned_cols=242  Identities=21%  Similarity=0.325  Sum_probs=199.0

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++.. .+|+.||+|++...        .....+.+.+|+.+|+.++|||||++++++.+.+..++|
T Consensus       161 i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~--------~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv  232 (573)
T 3uto_A          161 IHEELGTGAFGVVHRVTERATGNNFAAKFVMTP--------HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMI  232 (573)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------SHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEE
T ss_pred             EEEEEeeccCeEEEEEEECCCCCEEEEEEEecc--------chhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence            456799999999999997 57999999998651        223346788999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCC--CceEEeccCCccc
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAE--FTPRLADFGLAKL  257 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~--~~~kl~Dfgl~~~  257 (380)
                      ||||++|+|.+++..   ....+++.....++.||+.||+|||   +.+|+||||||+|||++.+  +.+||+|||+++.
T Consensus       233 ~E~~~gg~L~~~i~~---~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~  306 (573)
T 3uto_A          233 YEFMSGGELFEKVAD---EHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAH  306 (573)
T ss_dssp             EECCCCCBHHHHHTC---TTSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEE
T ss_pred             EeecCCCcHHHHHHH---hCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeE
Confidence            999999999999863   2446899999999999999999999   8999999999999999854  8999999999987


Q ss_pred             CCCC-----CcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhh
Q 047245          258 MPGS-----LIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREAL  332 (380)
Q Consensus       258 ~~~~-----~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  332 (380)
                      ....     ..||+.|||||++.+.+++.++||||+||++|||++|..||...        ...+..........     
T Consensus       307 ~~~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~--------~~~~~~~~i~~~~~-----  373 (573)
T 3uto_A          307 LDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGE--------NDDETLRNVKSCDW-----  373 (573)
T ss_dssp             CCTTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS--------SHHHHHHHHHTTCC-----
T ss_pred             ccCCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc--------CHHHHHHHHHhCCC-----
Confidence            7543     35999999999999999999999999999999999999999631        11222222221110     


Q ss_pred             chhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          333 DRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                        .. ........+..+.+|+.+||+.||.+|||++|+++
T Consensus       374 --~~-~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~  410 (573)
T 3uto_A          374 --NM-DDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALE  410 (573)
T ss_dssp             --CC-CSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             --CC-CcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence              00 01111223456789999999999999999999986


No 22 
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00  E-value=1.3e-46  Score=346.84  Aligned_cols=249  Identities=28%  Similarity=0.429  Sum_probs=197.4

Q ss_pred             cccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLVY  180 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  180 (380)
                      ..+.||+|+||.||++.. +|..||||++....      ......+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus        41 i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~------~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  113 (309)
T 3p86_A           41 IKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQD------FHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT  113 (309)
T ss_dssp             EEEEEEECSSEEEEEEEE-TTEEEEEEEECCCC------CSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred             eeeEeecCCCeEEEEEEE-CCCcEEEEEecCCC------CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence            457899999999999987 58899999986522      12344578899999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCC--eEecCCCCCcEEeCCCCceEEeccCCcccC
Q 047245          181 DYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQ--ILHYNLKPTNVMLDAEFTPRLADFGLAKLM  258 (380)
Q Consensus       181 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~  258 (380)
                      ||+++|+|.+++.... ....+++..++.++.|++.||+|||   +.+  ++||||||+||+++.++.+||+|||+++..
T Consensus       114 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~  189 (309)
T 3p86_A          114 EYLSRGSLYRLLHKSG-AREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK  189 (309)
T ss_dssp             ECCTTCBHHHHHHSTT-HHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEECCCC-----
T ss_pred             ecCCCCcHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEECCCCCCccc
Confidence            9999999999997421 1234899999999999999999999   888  999999999999999999999999999754


Q ss_pred             CC------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhh
Q 047245          259 PG------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREAL  332 (380)
Q Consensus       259 ~~------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  332 (380)
                      ..      ...||+.|+|||.+.+..++.++||||||+++|||++|+.||...        .............      
T Consensus       190 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~--------~~~~~~~~~~~~~------  255 (309)
T 3p86_A          190 ASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL--------NPAQVVAAVGFKC------  255 (309)
T ss_dssp             ------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTS--------CHHHHHHHHHHSC------
T ss_pred             cccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--------CHHHHHHHHHhcC------
Confidence            33      245899999999999999999999999999999999999998641        1111111111000      


Q ss_pred             chhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          333 DRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                          .....+......+.+++.+||+.||.+|||++++++.|+.+.
T Consensus       256 ----~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~  297 (309)
T 3p86_A          256 ----KRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLI  297 (309)
T ss_dssp             ----CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ----CCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence                011122234456889999999999999999999999998763


No 23 
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00  E-value=9.7e-46  Score=340.92  Aligned_cols=247  Identities=25%  Similarity=0.456  Sum_probs=203.9

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++.. .+|..||+|++..        ......+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        14 ~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~--------~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv   85 (310)
T 3s95_A           14 HGEVLGKGCFGQAIKVTHRETGEVMVMKELIR--------FDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFI   85 (310)
T ss_dssp             EEEEEECCSSEEEEEEEETTTCCEEEEEEESC--------CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             ccceecCCCCEEEEEEEECCCCcEEEEEEecc--------CCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEE
Confidence            457899999999999997 4689999998854        2344567899999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||+++|+|.+++..   ....+++..++.++.|++.||+|||   +.+++||||||+||+++.++.+||+|||+++...
T Consensus        86 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  159 (310)
T 3s95_A           86 TEYIKGGTLRGIIKS---MDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMV  159 (310)
T ss_dssp             EECCTTCBHHHHHHH---CCTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC
T ss_pred             EEecCCCcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceecc
Confidence            999999999999974   2456999999999999999999999   8999999999999999999999999999997543


Q ss_pred             C--------------------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHH
Q 047245          260 G--------------------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWL  319 (380)
Q Consensus       260 ~--------------------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~  319 (380)
                      .                    ...||+.|+|||.+.+..++.++||||||+++|||++|..|+............     
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~-----  234 (310)
T 3s95_A          160 DEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGL-----  234 (310)
T ss_dssp             --------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSB-----
T ss_pred             cccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhh-----
Confidence            2                    235899999999999999999999999999999999999998643222111110     


Q ss_pred             HHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          320 RHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                             ......+....     ......+.+++.+||+.||++|||+.|+++.|++++
T Consensus       235 -------~~~~~~~~~~~-----~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~  281 (310)
T 3s95_A          235 -------NVRGFLDRYCP-----PNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR  281 (310)
T ss_dssp             -------CHHHHHHHTCC-----TTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             -------hhhccccccCC-----CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence                   01111111111     112334788999999999999999999999999875


No 24 
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00  E-value=2.2e-45  Score=337.99  Aligned_cols=278  Identities=27%  Similarity=0.497  Sum_probs=224.1

Q ss_pred             CCCCChHHHHHHHhccc--------cccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHc
Q 047245           86 SPKIDPKTLQAALANEN--------RLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLAS  157 (380)
Q Consensus        86 ~~~~~~~~l~~~~~~~~--------~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~  157 (380)
                      ...++..++..++.++.        +.||+|+||.||+|.. ++..||+|++......    ......+.+.+|+.++++
T Consensus        12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~----~~~~~~~~~~~E~~~l~~   86 (307)
T 2nru_A           12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDI----TTEELKQQFDQEIKVMAK   86 (307)
T ss_dssp             CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTS----CTTTHHHHHHHHHHHHHH
T ss_pred             CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCc----chHHHHHHHHHHHHHHHh
Confidence            34578888999888754        5699999999999987 6889999998753211    123345788999999999


Q ss_pred             CCCCCcceeeEEEecCCeEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCC
Q 047245          158 LRHRNLMSLRAYVPESSRFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPT  237 (380)
Q Consensus       158 l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~  237 (380)
                      ++||||+++++++.+.+..++||||+++|+|.+++.... ....+++..++.++.|++.||+|||   +.+++||||||+
T Consensus        87 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~  162 (307)
T 2nru_A           87 CQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD-GTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSA  162 (307)
T ss_dssp             CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGG-GCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGG
T ss_pred             cCCCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhcc-CCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHH
Confidence            999999999999999999999999999999999997532 2456999999999999999999999   899999999999


Q ss_pred             cEEeCCCCceEEeccCCcccCCC--------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhc
Q 047245          238 NVMLDAEFTPRLADFGLAKLMPG--------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEA  309 (380)
Q Consensus       238 Nill~~~~~~kl~Dfgl~~~~~~--------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~  309 (380)
                      ||++++++.+||+|||+++....        ...|++.|+|||.+.+ .++.++||||||+++|||++|..||...    
T Consensus       163 Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~----  237 (307)
T 2nru_A          163 NILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEH----  237 (307)
T ss_dssp             GEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTT----
T ss_pred             HEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccC----
Confidence            99999999999999999876542        2358999999998865 5889999999999999999999998642    


Q ss_pred             cCCCCHHHHHHHHHhh-cchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhcccC
Q 047245          310 ASGGSLGRWLRHLQHA-GEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLHS  379 (380)
Q Consensus       310 ~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~~  379 (380)
                      .....+..+....... ..+.+.+++.+  ...+......+.+++.+||+.||.+|||+.++++.|+++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~  306 (307)
T 2nru_A          238 REPQLLLDIKEEIEDEEKTIEDYIDKKM--NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA  306 (307)
T ss_dssp             BSSSBTTHHHHHHHTTSCCHHHHSCSSC--SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred             cchHHHHHHHHHhhhhhhhhhhhccccc--cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence            1112233333333222 22344444433  22345677889999999999999999999999999999864


No 25 
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00  E-value=3.6e-46  Score=345.77  Aligned_cols=255  Identities=22%  Similarity=0.294  Sum_probs=198.7

Q ss_pred             cccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCC----eE
Q 047245          101 ENRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESS----RF  176 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~  176 (380)
                      ..+.||+|+||.||+|... ++.||||++...         ......+..|+.++++++||||+++++++.+..    ..
T Consensus        28 ~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~---------~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~   97 (322)
T 3soc_A           28 LLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQ---------DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDL   97 (322)
T ss_dssp             EEEEEECSTTCEEEEEEET-TEEEEEEEECGG---------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred             hhheecccCceEEEEEEEC-CCEEEEEEeecC---------chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceE
Confidence            4578999999999999875 799999998641         122345567999999999999999999997743    47


Q ss_pred             EEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCC----------CeEecCCCCCcEEeCCCCc
Q 047245          177 YLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNP----------QILHYNLKPTNVMLDAEFT  246 (380)
Q Consensus       177 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~----------~iiH~dlk~~Nill~~~~~  246 (380)
                      ++||||+++|+|.+++..     ..+++..++.++.|++.||+|||   +.          +++||||||+|||++.++.
T Consensus        98 ~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~  169 (322)
T 3soc_A           98 WLITAFHEKGSLSDFLKA-----NVVSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLT  169 (322)
T ss_dssp             EEEEECCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCC
T ss_pred             EEEEecCCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCe
Confidence            999999999999999973     35899999999999999999999   77          9999999999999999999


Q ss_pred             eEEeccCCcccCCC--------CCcCCCcccCcccccC-----CCCCCcchhhHHHHHHHHHHhCCCCCCchhhhc----
Q 047245          247 PRLADFGLAKLMPG--------SLIATSAYSAPECFQN-----RSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEA----  309 (380)
Q Consensus       247 ~kl~Dfgl~~~~~~--------~~~~~~~y~aPE~~~~-----~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~----  309 (380)
                      +||+|||+++....        ...||+.|+|||.+.+     ..++.++||||||+++|||++|+.||.......    
T Consensus       170 ~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~  249 (322)
T 3soc_A          170 ACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPF  249 (322)
T ss_dssp             EEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTT
T ss_pred             EEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccch
Confidence            99999999965432        2358999999999986     345678999999999999999999986421111    


Q ss_pred             ----cCCCCHHHHHHHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          310 ----ASGGSLGRWLRHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       310 ----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                          ........+........     ..+.+............+.+++.+||+.||++|||++|+++.|++++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~  317 (322)
T 3soc_A          250 EEEIGQHPSLEDMQEVVVHKK-----KRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQ  317 (322)
T ss_dssp             HHHHCSSCCHHHHHHHHTTSC-----CCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hhhhccCCchhhhhhhhhccc-----CCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence                11112222222211111     11111111122345677999999999999999999999999999875


No 26 
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00  E-value=9.1e-46  Score=349.47  Aligned_cols=249  Identities=21%  Similarity=0.381  Sum_probs=202.2

Q ss_pred             cccccCccCCeeEEEEEe--------cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcC-CCCCcceeeEEEe
Q 047245          101 ENRLLGSSPDGKYYRTVL--------DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASL-RHRNLMSLRAYVP  171 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~--------~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~  171 (380)
                      ..+.||+|+||.||++..        .++..||+|++...       ......+.+.+|+.+++++ +||||+++++++.
T Consensus        85 ~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-------~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~  157 (370)
T 2psq_A           85 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-------ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT  157 (370)
T ss_dssp             EEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTT-------CBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEEC
T ss_pred             eeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCC-------cCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEc
Confidence            457899999999999985        24567999998642       1234457899999999999 8999999999999


Q ss_pred             cCCeEEEEEeecCCCCHHHHHHHhhh------------cccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcE
Q 047245          172 ESSRFYLVYDYLQTGSLEDAMDRIRE------------NQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNV  239 (380)
Q Consensus       172 ~~~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Ni  239 (380)
                      +.+..++||||+++|+|.+++.....            ....+++..++.++.|++.||+|||   +.+++||||||+||
T Consensus       158 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NI  234 (370)
T 2psq_A          158 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNV  234 (370)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGE
T ss_pred             cCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhhE
Confidence            99999999999999999999985321            1235899999999999999999999   89999999999999


Q ss_pred             EeCCCCceEEeccCCcccCCC--------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhcc
Q 047245          240 MLDAEFTPRLADFGLAKLMPG--------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEAA  310 (380)
Q Consensus       240 ll~~~~~~kl~Dfgl~~~~~~--------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~~  310 (380)
                      |++.++.+||+|||+++....        ...+++.|+|||.+.+..++.++||||||+++|||++ |..||...     
T Consensus       235 ll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~-----  309 (370)
T 2psq_A          235 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-----  309 (370)
T ss_dssp             EECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-----
T ss_pred             EECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCC-----
Confidence            999999999999999985432        1236778999999999999999999999999999999 99998631     


Q ss_pred             CCCCHHHHHHHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          311 SGGSLGRWLRHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       311 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                         ...+.......          ... ...+......+.+++.+||+.||++|||+.|+++.|+++.
T Consensus       310 ---~~~~~~~~~~~----------~~~-~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il  363 (370)
T 2psq_A          310 ---PVEELFKLLKE----------GHR-MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL  363 (370)
T ss_dssp             ---CGGGHHHHHHT----------TCC-CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ---CHHHHHHHHhc----------CCC-CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence               11111111111          100 1112234456889999999999999999999999999874


No 27 
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00  E-value=1.3e-46  Score=356.20  Aligned_cols=246  Identities=20%  Similarity=0.333  Sum_probs=202.2

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||+|... +++.||||++...       ........|.+|+.++++++||||+++++++.+.+..++|
T Consensus       118 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-------~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  190 (377)
T 3cbl_A          118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET-------LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIV  190 (377)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEECCTT-------SCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             EeeEeccCCCCeEEEEEEecCCeEEEEEEcccc-------CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEE
Confidence            4578999999999999985 7899999998641       1233456788999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||+++|+|.+++..   ....+++..++.++.|++.||+|||   +.+++||||||+|||++.++.+||+|||+++...
T Consensus       191 ~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~  264 (377)
T 3cbl_A          191 MELVQGGDFLTFLRT---EGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEA  264 (377)
T ss_dssp             EECCTTCBHHHHHHH---HGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECT
T ss_pred             EEcCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCceecC
Confidence            999999999999974   2346899999999999999999999   8999999999999999999999999999998654


Q ss_pred             CC--------CcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhccCCCCHHHHHHHHHhhcchhH
Q 047245          260 GS--------LIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEAASGGSLGRWLRHLQHAGEARE  330 (380)
Q Consensus       260 ~~--------~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  330 (380)
                      ..        ..+++.|+|||.+.+..++.++||||||+++|||++ |..||...        ........ ...+    
T Consensus       265 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~--------~~~~~~~~-~~~~----  331 (377)
T 3cbl_A          265 DGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNL--------SNQQTREF-VEKG----  331 (377)
T ss_dssp             TSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTS--------CHHHHHHH-HHTT----
T ss_pred             CCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------CHHHHHHH-HHcC----
Confidence            32        124667999999998899999999999999999998 99998641        11111111 1111    


Q ss_pred             hhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          331 ALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                           . ....+...+..+.+++.+||+.||++|||++++++.|++++
T Consensus       332 -----~-~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~  373 (377)
T 3cbl_A          332 -----G-RLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR  373 (377)
T ss_dssp             -----C-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             -----C-CCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence                 0 01112224456889999999999999999999999999875


No 28 
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00  E-value=5.8e-46  Score=344.81  Aligned_cols=246  Identities=21%  Similarity=0.381  Sum_probs=201.2

Q ss_pred             cccccCccCCeeEEEEEec----CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeE
Q 047245          101 ENRLLGSSPDGKYYRTVLD----NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRF  176 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  176 (380)
                      ..+.||+|+||.||+|...    .+..||||++...       ......+.+.+|+.++++++||||+++++++.+.+..
T Consensus        53 i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~-------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  125 (325)
T 3kul_A           53 IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAG-------YTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLA  125 (325)
T ss_dssp             EEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTT-------CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCC
T ss_pred             EeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCC-------CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCcc
Confidence            4578999999999999973    4556999999641       1234457899999999999999999999999999999


Q ss_pred             EEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcc
Q 047245          177 YLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAK  256 (380)
Q Consensus       177 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~  256 (380)
                      ++||||+++|+|.+++..   ....+++..++.++.|++.||+|||   +.+++||||||+|||++.++.+||+|||+++
T Consensus       126 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~  199 (325)
T 3kul_A          126 MIVTEYMENGSLDTFLRT---HDGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSR  199 (325)
T ss_dssp             EEEEECCTTCBHHHHHHT---TTTCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCE
T ss_pred             EEEeeCCCCCcHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCccc
Confidence            999999999999999963   2456999999999999999999999   8999999999999999999999999999998


Q ss_pred             cCCCC---------CcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhccCCCCHHHHHHHHHhhc
Q 047245          257 LMPGS---------LIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEAASGGSLGRWLRHLQHAG  326 (380)
Q Consensus       257 ~~~~~---------~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~l~~~~~~~~~~~  326 (380)
                      .....         ..+|+.|+|||.+.+..++.++||||||+++|||++ |..||...        ...+........ 
T Consensus       200 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~--------~~~~~~~~~~~~-  270 (325)
T 3kul_A          200 VLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNM--------TNRDVISSVEEG-  270 (325)
T ss_dssp             ECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTS--------CHHHHHHHHHTT-
T ss_pred             ccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccC--------CHHHHHHHHHcC-
Confidence            65432         235678999999998999999999999999999999 99998531        111111111111 


Q ss_pred             chhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          327 EAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                               . ....+......+.+++.+||+.||++|||+.++++.|+.+.
T Consensus       271 ---------~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~  312 (325)
T 3kul_A          271 ---------Y-RLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALI  312 (325)
T ss_dssp             ---------C-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ---------C-CCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence                     0 01112234556889999999999999999999999999863


No 29 
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00  E-value=1.8e-45  Score=337.26  Aligned_cols=239  Identities=22%  Similarity=0.362  Sum_probs=196.8

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++.. .+|+.||+|++......        ..+.+.+|+.++++++||||+++++++...+..++|
T Consensus        24 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--------~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv   95 (297)
T 3fxz_A           24 RFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP--------KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV   95 (297)
T ss_dssp             CCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCS--------CHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             eeeeeccCCCeEEEEEEECCCCcEEEEEEeeccccc--------HHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEE
Confidence            346799999999999985 67899999999753221        135688999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||+++|+|.+++..     ..+++..+..++.|++.||+|||   +.+++||||||+|||++.++.+||+|||++....
T Consensus        96 ~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~  167 (297)
T 3fxz_A           96 MEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT  167 (297)
T ss_dssp             EECCTTCBHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EECCCCCCHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecC
Confidence            999999999999873     35899999999999999999999   8899999999999999999999999999987654


Q ss_pred             C------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhhc
Q 047245          260 G------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREALD  333 (380)
Q Consensus       260 ~------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  333 (380)
                      .      ...||+.|+|||.+.+..++.++||||||+++|||++|..||...        ............+.      
T Consensus       168 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~--------~~~~~~~~~~~~~~------  233 (297)
T 3fxz_A          168 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE--------NPLRALYLIATNGT------  233 (297)
T ss_dssp             STTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTS--------CHHHHHHHHHHHCS------
T ss_pred             CcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC--------CHHHHHHHHHhCCC------
Confidence            2      235899999999999999999999999999999999999998531        11111111111110      


Q ss_pred             hhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          334 RSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      +   ....+......+.+++.+||+.||++|||++|+++
T Consensus       234 ~---~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  269 (297)
T 3fxz_A          234 P---ELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ  269 (297)
T ss_dssp             C---CCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             C---CCCCccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            0   01112234556889999999999999999999975


No 30 
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00  E-value=4.8e-46  Score=351.71  Aligned_cols=245  Identities=20%  Similarity=0.413  Sum_probs=193.1

Q ss_pred             cccccCccCCeeEEEEEec----CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeE
Q 047245          101 ENRLLGSSPDGKYYRTVLD----NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRF  176 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  176 (380)
                      ..+.||+|+||.||+|...    ++..||||++...       ......+.|.+|+.++++++||||+++++++.+.+..
T Consensus        49 ~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~-------~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~  121 (373)
T 2qol_A           49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG-------YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV  121 (373)
T ss_dssp             CCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTT-------CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred             eeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCc-------cCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCce
Confidence            5678999999999999864    5778999998642       1234457899999999999999999999999999999


Q ss_pred             EEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcc
Q 047245          177 YLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAK  256 (380)
Q Consensus       177 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~  256 (380)
                      ++||||+++|+|.++++.   ....+++..++.++.|++.||+|||   +.+++||||||+|||++.++.+||+|||+++
T Consensus       122 ~lv~e~~~~~sL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~  195 (373)
T 2qol_A          122 MIVTEYMENGSLDSFLRK---HDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGR  195 (373)
T ss_dssp             EEEEECCTTCBHHHHHHT---TTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC----
T ss_pred             EEEEeCCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCcccc
Confidence            999999999999999973   2446899999999999999999999   8899999999999999999999999999998


Q ss_pred             cCCCC---------CcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhccCCCCHHHHHHHHHhhc
Q 047245          257 LMPGS---------LIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEAASGGSLGRWLRHLQHAG  326 (380)
Q Consensus       257 ~~~~~---------~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~l~~~~~~~~~~~  326 (380)
                      .....         ..+++.|+|||.+.+..++.++||||||+++|||++ |..||...        ...+....     
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~--------~~~~~~~~-----  262 (373)
T 2qol_A          196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM--------SNQDVIKA-----  262 (373)
T ss_dssp             ------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTC--------CHHHHHHH-----
T ss_pred             ccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCC--------CHHHHHHH-----
Confidence            65432         124678999999999999999999999999999998 99998531        11111111     


Q ss_pred             chhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhcc
Q 047245          327 EAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQL  377 (380)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l  377 (380)
                           +...... ..+......+.+++.+||+.||++|||+.++++.|+++
T Consensus       263 -----i~~~~~~-~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~  307 (373)
T 2qol_A          263 -----VDEGYRL-PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL  307 (373)
T ss_dssp             -----HHTTEEC-CCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -----HHcCCCC-CCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHH
Confidence                 1111111 11123456688999999999999999999999999876


No 31 
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00  E-value=5.7e-45  Score=338.34  Aligned_cols=239  Identities=21%  Similarity=0.338  Sum_probs=198.6

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++.. .+|+.||+|++....      ......+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        19 ~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~------~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv   92 (328)
T 3fe3_A           19 LLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQ------LNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI   92 (328)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGG------SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhc------CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence            446899999999999997 679999999997532      2334457788999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||+++|+|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+|||++.++.+||+|||+++...
T Consensus        93 ~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  165 (328)
T 3fe3_A           93 MEYASGGEVFDYLVA----HGRMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFT  165 (328)
T ss_dssp             ECCCTTCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGS
T ss_pred             EECCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceecC
Confidence            999999999999974    346899999999999999999999   8999999999999999999999999999997644


Q ss_pred             C-----CCcCCCcccCcccccCCCCC-CcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhhc
Q 047245          260 G-----SLIATSAYSAPECFQNRSYT-DKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREALD  333 (380)
Q Consensus       260 ~-----~~~~~~~y~aPE~~~~~~~~-~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  333 (380)
                      .     ...||+.|+|||.+.+..++ .++||||||+++|||++|+.||...        .............       
T Consensus       166 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~--------~~~~~~~~i~~~~-------  230 (328)
T 3fe3_A          166 VGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ--------NLKELRERVLRGK-------  230 (328)
T ss_dssp             SSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHCC-------
T ss_pred             CCCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCC--------CHHHHHHHHHhCC-------
Confidence            2     34589999999999988775 7999999999999999999998641        2222222222111       


Q ss_pred             hhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          334 RSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                           ...+......+.+++.+||+.||.+|||++|+++
T Consensus       231 -----~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~  264 (328)
T 3fe3_A          231 -----YRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMK  264 (328)
T ss_dssp             -----CCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred             -----CCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence                 0111223455789999999999999999999975


No 32 
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00  E-value=4.2e-45  Score=338.46  Aligned_cols=253  Identities=21%  Similarity=0.350  Sum_probs=205.2

Q ss_pred             CCCChHHHHHHHhc------------cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHH
Q 047245           87 PKIDPKTLQAALAN------------ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELE  153 (380)
Q Consensus        87 ~~~~~~~l~~~~~~------------~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~  153 (380)
                      +.++..+++.++..            ..+.||+|+||.||+|... +|+.||||++.....        ...+.+.+|+.
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~--------~~~~~~~~E~~   94 (321)
T 2c30_A           23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ--------QRRELLFNEVV   94 (321)
T ss_dssp             --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--------CSHHHHHHHHH
T ss_pred             CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccch--------hHHHHHHHHHH
Confidence            45677888877753            3457999999999999975 799999999975221        12366889999


Q ss_pred             HHHcCCCCCcceeeEEEecCCeEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecC
Q 047245          154 VLASLRHRNLMSLRAYVPESSRFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYN  233 (380)
Q Consensus       154 ~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~d  233 (380)
                      ++++++||||+++++++...+..++||||+++|+|.+++.     ...+++..+..++.|++.||+|||   +.+++|||
T Consensus        95 ~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-----~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~D  166 (321)
T 2c30_A           95 IMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVS-----QVRLNEEQIATVCEAVLQALAYLH---AQGVIHRD  166 (321)
T ss_dssp             HHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCC
T ss_pred             HHHhCCCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHH---HCCeecCC
Confidence            9999999999999999999999999999999999999986     346899999999999999999999   88999999


Q ss_pred             CCCCcEEeCCCCceEEeccCCcccCCC------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhh
Q 047245          234 LKPTNVMLDAEFTPRLADFGLAKLMPG------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFA  307 (380)
Q Consensus       234 lk~~Nill~~~~~~kl~Dfgl~~~~~~------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~  307 (380)
                      |||+||+++.++.+||+|||++.....      ...||+.|+|||.+.+..++.++||||||+++|||++|+.||...  
T Consensus       167 lkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~--  244 (321)
T 2c30_A          167 IKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSD--  244 (321)
T ss_dssp             CSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--
T ss_pred             CCHHHEEECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--
Confidence            999999999999999999999876543      235899999999999999999999999999999999999998631  


Q ss_pred             hccCCCCHHHHHHHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          308 EAASGGSLGRWLRHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       308 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                            ............      ..+...   ........+.+++.+||+.||++|||++|+++
T Consensus       245 ------~~~~~~~~~~~~------~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  294 (321)
T 2c30_A          245 ------SPVQAMKRLRDS------PPPKLK---NSHKVSPVLRDFLERMLVRDPQERATAQELLD  294 (321)
T ss_dssp             ------CHHHHHHHHHHS------SCCCCT---TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             ------CHHHHHHHHhcC------CCCCcC---ccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                  111122211111      011110   11123455789999999999999999999986


No 33 
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00  E-value=1.8e-45  Score=331.91  Aligned_cols=245  Identities=21%  Similarity=0.350  Sum_probs=202.3

Q ss_pred             cccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLVY  180 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  180 (380)
                      ..+.||+|+||.||++...++..||+|++.....         ..+++.+|++++.+++||||+++++++.+.+..++||
T Consensus        12 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   82 (268)
T 3sxs_A           12 LLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM---------SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVT   82 (268)
T ss_dssp             EEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB---------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred             eeeeeccCCCceEEEEEecCceeEEEEEeccCCC---------cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEE
Confidence            4568999999999999998888999999975221         1256889999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCCC
Q 047245          181 DYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMPG  260 (380)
Q Consensus       181 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~  260 (380)
                      ||+++|+|.+++...   ...+++..++.++.|++.||+|||   +.+++||||||+||+++.++.+||+|||++.....
T Consensus        83 e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~  156 (268)
T 3sxs_A           83 EYISNGCLLNYLRSH---GKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD  156 (268)
T ss_dssp             ECCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCT
T ss_pred             EccCCCcHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecch
Confidence            999999999999742   346899999999999999999999   89999999999999999999999999999976543


Q ss_pred             C-------CcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhh
Q 047245          261 S-------LIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREAL  332 (380)
Q Consensus       261 ~-------~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  332 (380)
                      .       ..+++.|+|||.+.+..++.++||||||+++|||++ |..||...        .............      
T Consensus       157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--------~~~~~~~~~~~~~------  222 (268)
T 3sxs_A          157 DQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLY--------TNSEVVLKVSQGH------  222 (268)
T ss_dssp             TCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTS--------CHHHHHHHHHTTC------
T ss_pred             hhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCcccc--------ChHHHHHHHHcCC------
Confidence            2       235677999999998899999999999999999999 99998631        1111111111110      


Q ss_pred             chhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhcccC
Q 047245          333 DRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLHS  379 (380)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~~  379 (380)
                       .    ...+......+.+++.+||+.||++|||+.|+++.|+.++.
T Consensus       223 -~----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~  264 (268)
T 3sxs_A          223 -R----LYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE  264 (268)
T ss_dssp             -C----CCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred             -C----CCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence             0    01111234458899999999999999999999999999864


No 34 
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=1.8e-45  Score=332.20  Aligned_cols=244  Identities=21%  Similarity=0.347  Sum_probs=202.4

Q ss_pred             cccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLVY  180 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  180 (380)
                      ..+.||+|+||.||++...++..||+|++.....         ..+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus        14 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   84 (269)
T 4hcu_A           14 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM---------SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVF   84 (269)
T ss_dssp             EEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB---------CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred             eeheecCCCccEEEEEEecCCCeEEEEEeccccc---------CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEE
Confidence            4568999999999999998899999999975211         1256889999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCCC
Q 047245          181 DYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMPG  260 (380)
Q Consensus       181 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~  260 (380)
                      ||+++|+|.+++..   ....+++..++.++.|++.||+|||   +.+++||||||+||+++.++.+||+|||+++....
T Consensus        85 e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~  158 (269)
T 4hcu_A           85 EFMEHGCLSDYLRT---QRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD  158 (269)
T ss_dssp             ECCTTCBHHHHHHT---TTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred             EeCCCCcHHHHHHh---cCcccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEeccccccccccc
Confidence            99999999999963   2446899999999999999999999   89999999999999999999999999999976532


Q ss_pred             -------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhh
Q 047245          261 -------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREAL  332 (380)
Q Consensus       261 -------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  332 (380)
                             ...+++.|+|||.+.+..++.++||||||+++|||++ |..||...        .............      
T Consensus       159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~--------~~~~~~~~~~~~~------  224 (269)
T 4hcu_A          159 DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR--------SNSEVVEDISTGF------  224 (269)
T ss_dssp             HHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--------CHHHHHHHHHTTC------
T ss_pred             cccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCC--------CHHHHHHHHhcCc------
Confidence                   2346778999999998999999999999999999999 99998631        1122222221110      


Q ss_pred             chhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          333 DRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                      .     ...+......+.+++.+||+.||++|||++|+++.|+++.
T Consensus       225 ~-----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~  265 (269)
T 4hcu_A          225 R-----LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA  265 (269)
T ss_dssp             C-----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             c-----CCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHH
Confidence            0     1111223455889999999999999999999999999874


No 35 
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00  E-value=1.5e-45  Score=357.25  Aligned_cols=245  Identities=23%  Similarity=0.400  Sum_probs=202.3

Q ss_pred             ccccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          100 NENRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       100 ~~~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ...+.||+|+||.||+|...++..||||+++....         ..+.|.+|+.++++++||||+++++++. .+..++|
T Consensus       191 ~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv  260 (454)
T 1qcf_A          191 KLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM---------SVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYII  260 (454)
T ss_dssp             EEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSB---------CHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred             EEEEEcccCCceEEEEEEECCccEEEEEEecCCCc---------cHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEE
Confidence            35678999999999999998889999999975211         1367899999999999999999999986 5678999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||+++|+|.+++...  ....+++..++.++.|++.||+|||   +.+++||||||+|||++.++.+||+|||+++...
T Consensus       261 ~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~  335 (454)
T 1qcf_A          261 TEFMAKGSLLDFLKSD--EGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIE  335 (454)
T ss_dssp             ECCCTTCBHHHHHHSH--HHHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBC
T ss_pred             EeecCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcC
Confidence            9999999999999742  2346889999999999999999999   8899999999999999999999999999998654


Q ss_pred             C-------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhccCCCCHHHHHHHHHhhcchhHh
Q 047245          260 G-------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREA  331 (380)
Q Consensus       260 ~-------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  331 (380)
                      .       ...++..|+|||.+....++.++||||||+++|||++ |+.||...        ...+.........     
T Consensus       336 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~--------~~~~~~~~i~~~~-----  402 (454)
T 1qcf_A          336 DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM--------SNPEVIRALERGY-----  402 (454)
T ss_dssp             CHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--------CHHHHHHHHHHTC-----
T ss_pred             CCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCC--------CHHHHHHHHHcCC-----
Confidence            2       2336778999999998999999999999999999999 99998631        1122222211111     


Q ss_pred             hchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          332 LDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                       .     ...+...+..+.+++.+||+.||++|||+++|++.|+++.
T Consensus       403 -~-----~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~  443 (454)
T 1qcf_A          403 -R-----MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFY  443 (454)
T ss_dssp             -C-----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred             -C-----CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence             0     1112234556889999999999999999999999999874


No 36 
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00  E-value=7.6e-45  Score=351.84  Aligned_cols=243  Identities=23%  Similarity=0.391  Sum_probs=199.4

Q ss_pred             cccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCC-eEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESS-RFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv  179 (380)
                      ..+.||+|+||.||+|... |+.||||+++...          ..+.|.+|+.++++++||||+++++++.+.. ..++|
T Consensus       197 ~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~----------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv  265 (450)
T 1k9a_A          197 LLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA----------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV  265 (450)
T ss_dssp             EEEEEEECSSEEEEEEEET-TEEEEEEEESSCT----------TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEE
T ss_pred             EEeeecCcCCeeEEEEEec-CCeEEEEEeCCch----------HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEE
Confidence            4578999999999999985 7899999997521          1367899999999999999999999987665 79999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||+++|+|.+++...  ....+++..++.++.|++.||+|||   +.+++||||||+|||++.++.+||+|||+++...
T Consensus       266 ~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~  340 (450)
T 1k9a_A          266 TEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS  340 (450)
T ss_dssp             EECCTTCBHHHHHHHH--CTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EEecCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCccccc
Confidence            9999999999999852  2335799999999999999999999   8999999999999999999999999999998654


Q ss_pred             C---CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhhchh
Q 047245          260 G---SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREALDRS  335 (380)
Q Consensus       260 ~---~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  335 (380)
                      .   ...+++.|+|||.+.+..++.++||||||+++|||++ |..||...     .....   .......          
T Consensus       341 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~-----~~~~~---~~~i~~~----------  402 (450)
T 1k9a_A          341 STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-----PLKDV---VPRVEKG----------  402 (450)
T ss_dssp             ------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTS-----CTTTH---HHHHHTT----------
T ss_pred             ccccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----CHHHH---HHHHHcC----------
Confidence            3   2346789999999999999999999999999999999 99998631     11111   1111111          


Q ss_pred             ccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          336 ILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       336 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                      . ....+...+..+.+++.+||+.||++|||+.++++.|++++
T Consensus       403 ~-~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~  444 (450)
T 1k9a_A          403 Y-KMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIR  444 (450)
T ss_dssp             C-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             C-CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            0 01122334566889999999999999999999999999875


No 37 
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00  E-value=3.2e-45  Score=335.01  Aligned_cols=257  Identities=23%  Similarity=0.336  Sum_probs=199.6

Q ss_pred             cccccCccCCeeEEEEEe-----cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecC--
Q 047245          101 ENRLLGSSPDGKYYRTVL-----DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPES--  173 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--  173 (380)
                      ..+.||+|+||.||++..     .+|+.||+|++..        ......+.+.+|+.++++++||||+++++++...  
T Consensus        14 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~--------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   85 (295)
T 3ugc_A           14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH--------STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR   85 (295)
T ss_dssp             EEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESC--------CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHH
T ss_pred             hhheeeccCCEEEEEEEEecccCCCCcEEEEEEccc--------CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence            457899999999999984     3688999999864        1234457899999999999999999999998543  


Q ss_pred             CeEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccC
Q 047245          174 SRFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFG  253 (380)
Q Consensus       174 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfg  253 (380)
                      ...++||||+++|+|.+++...   ...+++..++.++.|++.||+|||   +.+++||||||+||+++.++.+||+|||
T Consensus        86 ~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg  159 (295)
T 3ugc_A           86 RNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFG  159 (295)
T ss_dssp             TSCEEEEECCTTCBHHHHHHHC---GGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCC
T ss_pred             CceEEEEEeCCCCCHHHHHHhc---ccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCc
Confidence            5689999999999999999742   345899999999999999999999   8999999999999999999999999999


Q ss_pred             CcccCCCC---------CcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhc----cCCCCHHHHHH
Q 047245          254 LAKLMPGS---------LIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEA----ASGGSLGRWLR  320 (380)
Q Consensus       254 l~~~~~~~---------~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~----~~~~~l~~~~~  320 (380)
                      +++.....         ..++..|+|||.+.+..++.++||||||+++|||++|..|+.....+.    ...........
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (295)
T 3ugc_A          160 LTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF  239 (295)
T ss_dssp             SCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHH
T ss_pred             ccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHH
Confidence            99865422         236677999999999999999999999999999999999986422110    00000000000


Q ss_pred             HHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          321 HLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                            ...+.+.... ....+...+..+.+++.+||+.||++|||++|+++.|++++
T Consensus       240 ------~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~  290 (295)
T 3ugc_A          240 ------HLIELLKNNG-RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR  290 (295)
T ss_dssp             ------HHHHHHHTTC-CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ------HHHHHHhccC-cCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence                  0011111111 01122334566889999999999999999999999999875


No 38 
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00  E-value=8.9e-46  Score=362.35  Aligned_cols=247  Identities=26%  Similarity=0.417  Sum_probs=203.5

Q ss_pred             hccccccCccCCeeEEEEEecC-CcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEE
Q 047245           99 ANENRLLGSSPDGKYYRTVLDN-GLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFY  177 (380)
Q Consensus        99 ~~~~~~lg~G~~g~vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  177 (380)
                      ....+.||+|+||.||+|...+ +..||||.+.....         ..+.|.+|+.++++++||||++++++|.+.+..+
T Consensus       222 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~  292 (495)
T 1opk_A          222 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---------EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY  292 (495)
T ss_dssp             EEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS---------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             ceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc---------chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEE
Confidence            3456789999999999999864 88999999865211         1367899999999999999999999999999999


Q ss_pred             EEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCccc
Q 047245          178 LVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKL  257 (380)
Q Consensus       178 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~  257 (380)
                      +||||+++|+|.+++..  .....+++..++.++.|++.||+|||   +.+++||||||+|||++.++.+||+|||+++.
T Consensus       293 lv~E~~~~g~L~~~l~~--~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~  367 (495)
T 1opk_A          293 IITEFMTYGNLLDYLRE--CNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRL  367 (495)
T ss_dssp             EEEECCTTCBHHHHHHH--SCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEEC
T ss_pred             EEEEccCCCCHHHHHHh--cCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeeccccee
Confidence            99999999999999974  23456899999999999999999999   89999999999999999999999999999987


Q ss_pred             CCCC-------CcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhccCCCCHHHHHHHHHhhcchh
Q 047245          258 MPGS-------LIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEAASGGSLGRWLRHLQHAGEAR  329 (380)
Q Consensus       258 ~~~~-------~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~  329 (380)
                      ....       ..++..|+|||.+.+..++.++||||||+++|||++ |..||....        ....          .
T Consensus       368 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~--------~~~~----------~  429 (495)
T 1opk_A          368 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID--------LSQV----------Y  429 (495)
T ss_dssp             CTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC--------GGGH----------H
T ss_pred             ccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCC--------HHHH----------H
Confidence            6432       235678999999999999999999999999999999 999986311        1111          1


Q ss_pred             HhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          330 EALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                      +.+..... ...+......+.+++.+||+.||++|||+.++++.|+.+.
T Consensus       430 ~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~  477 (495)
T 1opk_A          430 ELLEKDYR-MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF  477 (495)
T ss_dssp             HHHHTTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred             HHHHcCCC-CCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence            11111111 1112234566889999999999999999999999999863


No 39 
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.7e-44  Score=337.31  Aligned_cols=238  Identities=25%  Similarity=0.371  Sum_probs=191.7

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++.. .+|+.||+|++......       .....+.+|+.++++++||||+++++++.+.+..++|
T Consensus        14 i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~-------~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv   86 (347)
T 3zgw_A           14 LHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG-------SDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMV   86 (347)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC----------CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             EEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccc-------hHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEE
Confidence            457899999999999986 57899999999763221       1235688999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||+++|+|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+|||+++++.+||+|||++....
T Consensus        87 ~E~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~  159 (347)
T 3zgw_A           87 LEYCPGGELFDYIIS----QDRLSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPK  159 (347)
T ss_dssp             EECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC--
T ss_pred             EeCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCccHHHEEEcCCCCEEEEeccCccccc
Confidence            999999999999974    346999999999999999999999   8999999999999999999999999999987643


Q ss_pred             C-------CCcCCCcccCcccccCCCC-CCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHh
Q 047245          260 G-------SLIATSAYSAPECFQNRSY-TDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREA  331 (380)
Q Consensus       260 ~-------~~~~~~~y~aPE~~~~~~~-~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  331 (380)
                      .       ...||+.|+|||.+.+..+ +.++||||||+++|||++|..||..        ..............     
T Consensus       160 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~--------~~~~~~~~~i~~~~-----  226 (347)
T 3zgw_A          160 GNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDD--------DNVMALYKKIMRGK-----  226 (347)
T ss_dssp             ------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHTC-----
T ss_pred             CCCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCC--------CCHHHHHHHHHcCC-----
Confidence            2       2358999999999988775 8899999999999999999999864        12222222222111     


Q ss_pred             hchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          332 LDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                          .   ..+......+.+++.+||+.||++|||++|+++
T Consensus       227 ----~---~~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~  260 (347)
T 3zgw_A          227 ----Y---DVPKWLSPSSILLLQQMLQVDPKKRISMKNLLN  260 (347)
T ss_dssp             ----C---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ----C---CCCCCCCHHHHHHHHHHcccCHhHCcCHHHHhc
Confidence                0   111223445778999999999999999999985


No 40 
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00  E-value=3.8e-45  Score=330.27  Aligned_cols=246  Identities=24%  Similarity=0.387  Sum_probs=189.7

Q ss_pred             cccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLVY  180 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  180 (380)
                      ..+.||+|+||.||++... |..+|+|++......    ......+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus        11 ~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~----~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   85 (271)
T 3dtc_A           11 LEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDE----DISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM   85 (271)
T ss_dssp             EEEEEEEETTEEEEEEEET-TEEEEEEEC--------------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred             eeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcc----cHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence            4578999999999999975 899999998753221    11233467889999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCC---eEecCCCCCcEEeCC--------CCceEE
Q 047245          181 DYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQ---ILHYNLKPTNVMLDA--------EFTPRL  249 (380)
Q Consensus       181 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~---iiH~dlk~~Nill~~--------~~~~kl  249 (380)
                      ||+++++|.+++.     ...+++..++.++.|++.||+|||   +.+   ++||||||+||+++.        ++.+||
T Consensus        86 e~~~~~~L~~~~~-----~~~~~~~~~~~i~~~l~~~l~~lH---~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl  157 (271)
T 3dtc_A           86 EFARGGPLNRVLS-----GKRIPPDILVNWAVQIARGMNYLH---DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKI  157 (271)
T ss_dssp             ECCTTEEHHHHHT-----SSCCCHHHHHHHHHHHHHHHHHHH---HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEE
T ss_pred             EcCCCCCHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHH---hCCCCceeecCCchHHEEEecccccccccCcceEE
Confidence            9999999999985     347899999999999999999999   666   999999999999986        678999


Q ss_pred             eccCCcccCCC----CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhh
Q 047245          250 ADFGLAKLMPG----SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHA  325 (380)
Q Consensus       250 ~Dfgl~~~~~~----~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~  325 (380)
                      +|||++.....    ...+++.|+|||.+.+..++.++||||||+++|||++|+.||...        ............
T Consensus       158 ~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~--------~~~~~~~~~~~~  229 (271)
T 3dtc_A          158 TDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGI--------DGLAVAYGVAMN  229 (271)
T ss_dssp             CCCCC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTS--------CHHHHHHHHHTS
T ss_pred             ccCCcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC--------CHHHHHHhhhcC
Confidence            99999976543    245899999999999999999999999999999999999998631        111111111111


Q ss_pred             cchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhcc
Q 047245          326 GEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQL  377 (380)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l  377 (380)
                      .          .....+......+.+++.+||+.||++|||+.|+++.|++|
T Consensus       230 ~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          230 K----------LALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             C----------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             C----------CCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence            0          01112223445688999999999999999999999999875


No 41 
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00  E-value=5.9e-45  Score=328.60  Aligned_cols=249  Identities=20%  Similarity=0.341  Sum_probs=201.4

Q ss_pred             cccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecC--CeEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPES--SRFYL  178 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l  178 (380)
                      ..+.||+|+||.||+|... |..||+|++....      ......+.+.+|+.++++++||||+++++++.+.  +..++
T Consensus        14 ~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l   86 (271)
T 3kmu_A           14 FLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRD------WSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTL   86 (271)
T ss_dssp             EEEEEEEETTEEEEEEEET-TEEEEEEEECCTT------CCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEE
T ss_pred             HHHHhcCCCcceEEEEEEC-CeeEEEEEecccc------cCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEe
Confidence            4578999999999999985 8999999997622      2234457899999999999999999999999887  78899


Q ss_pred             EEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCC--eEecCCCCCcEEeCCCCceEEeccCCcc
Q 047245          179 VYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQ--ILHYNLKPTNVMLDAEFTPRLADFGLAK  256 (380)
Q Consensus       179 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--iiH~dlk~~Nill~~~~~~kl~Dfgl~~  256 (380)
                      ||||+++|+|.+++..  .....+++..++.++.|++.||+|||   +.+  ++||||||+||+++.++.++|+|||+..
T Consensus        87 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~  161 (271)
T 3kmu_A           87 ITHWMPYGSLYNVLHE--GTNFVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKF  161 (271)
T ss_dssp             EEECCTTCBHHHHHHS--CSSCCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCC
T ss_pred             eecccCCCcHHHHHhh--cccCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEecccee
Confidence            9999999999999974  22336899999999999999999999   778  9999999999999999999999888876


Q ss_pred             cCC-CCCcCCCcccCcccccCCCCCC---cchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhh
Q 047245          257 LMP-GSLIATSAYSAPECFQNRSYTD---KSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREAL  332 (380)
Q Consensus       257 ~~~-~~~~~~~~y~aPE~~~~~~~~~---~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  332 (380)
                      ... ....+|+.|+|||.+.+..++.   ++||||||+++|||++|+.||...        ............+     .
T Consensus       162 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~--------~~~~~~~~~~~~~-----~  228 (271)
T 3kmu_A          162 SFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADL--------SNMEIGMKVALEG-----L  228 (271)
T ss_dssp             TTSCTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTS--------CHHHHHHHHHHSC-----C
T ss_pred             eecccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCcccc--------ChHHHHHHHHhcC-----C
Confidence            543 3456899999999998765544   799999999999999999998631        1111111111111     0


Q ss_pred             chhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhcccC
Q 047245          333 DRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLHS  379 (380)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~~  379 (380)
                      .     ...+......+.+++..||+.||++|||++|+++.|++++.
T Consensus       229 ~-----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~  270 (271)
T 3kmu_A          229 R-----PTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD  270 (271)
T ss_dssp             C-----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred             C-----CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence            1     11122344568899999999999999999999999998863


No 42 
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00  E-value=3.5e-45  Score=345.21  Aligned_cols=249  Identities=21%  Similarity=0.342  Sum_probs=200.5

Q ss_pred             cccccCccCCeeEEEEEec------CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCC
Q 047245          101 ENRLLGSSPDGKYYRTVLD------NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESS  174 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  174 (380)
                      ..+.||+|+||.||+|...      ++..||||++...       ........+.+|+.++++++||||+++++++.+..
T Consensus        75 ~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-------~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~  147 (367)
T 3l9p_A           75 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV-------CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL  147 (367)
T ss_dssp             EEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSS-------CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             EeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccc-------cChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence            4578999999999999853      4678999998641       12334467889999999999999999999999999


Q ss_pred             eEEEEEeecCCCCHHHHHHHhhh---cccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCC---ceE
Q 047245          175 RFYLVYDYLQTGSLEDAMDRIRE---NQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEF---TPR  248 (380)
Q Consensus       175 ~~~lv~e~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~---~~k  248 (380)
                      ..++||||+++|+|.+++.....   ....+++..++.++.|++.||+|||   +.+++||||||+|||++.++   .+|
T Consensus       148 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~k  224 (367)
T 3l9p_A          148 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAK  224 (367)
T ss_dssp             SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEE
T ss_pred             CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEE
Confidence            99999999999999999986432   2245999999999999999999999   89999999999999999554   599


Q ss_pred             EeccCCcccC--------CCCCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhccCCCCHHHHH
Q 047245          249 LADFGLAKLM--------PGSLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEAASGGSLGRWL  319 (380)
Q Consensus       249 l~Dfgl~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~l~~~~  319 (380)
                      |+|||+++..        .....+|+.|+|||.+.+..++.++||||||+++|||++ |..||...        ......
T Consensus       225 L~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~--------~~~~~~  296 (367)
T 3l9p_A          225 IGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK--------SNQEVL  296 (367)
T ss_dssp             ECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--------CHHHHH
T ss_pred             ECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--------CHHHHH
Confidence            9999998632        122347889999999999999999999999999999998 99998631        112222


Q ss_pred             HHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          320 RHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                      ........           ...+......+.+++.+||+.||++|||+.++++.|+.+.
T Consensus       297 ~~i~~~~~-----------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~  344 (367)
T 3l9p_A          297 EFVTSGGR-----------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT  344 (367)
T ss_dssp             HHHHTTCC-----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHcCCC-----------CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence            22221110           1111233456889999999999999999999999998764


No 43 
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00  E-value=9.5e-44  Score=325.31  Aligned_cols=251  Identities=20%  Similarity=0.331  Sum_probs=201.5

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++.. .++..||+|++.....     ......+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        15 i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv   89 (294)
T 4eqm_A           15 IVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPR-----EKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV   89 (294)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSS-----CCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred             EEEEEccCCCEEEEEEEECCCCCeEEEEEeccCcc-----ccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence            346899999999999986 4688999999865322     2344567899999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||+++|+|.+++..    ...+++..++.++.|++.||+|||   +.+++||||||+||+++.++.+||+|||+++...
T Consensus        90 ~e~~~g~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~  162 (294)
T 4eqm_A           90 MEYIEGPTLSEYIES----HGPLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALS  162 (294)
T ss_dssp             EECCCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-
T ss_pred             EeCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCccccc
Confidence            999999999999974    346899999999999999999999   8999999999999999999999999999998654


Q ss_pred             CC-------CcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhh
Q 047245          260 GS-------LIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREAL  332 (380)
Q Consensus       260 ~~-------~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  332 (380)
                      ..       ..||+.|+|||.+.+..++.++||||||+++|||++|+.||...        .............. .. .
T Consensus       163 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~--------~~~~~~~~~~~~~~-~~-~  232 (294)
T 4eqm_A          163 ETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGE--------TAVSIAIKHIQDSV-PN-V  232 (294)
T ss_dssp             ------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSS--------CHHHHHHHHHSSCC-CC-H
T ss_pred             cccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC--------ChHHHHHHHhhccC-CC-c
Confidence            32       34899999999999999999999999999999999999998641        11111111111110 00 0


Q ss_pred             chhccCCcccHHHHHHHHHHHHHcccCCCCCCC-CHHhHHHHHhccc
Q 047245          333 DRSILGEEVEEDEMLMAVRIAVVCLSDSPADRP-SSDELVPMLTQLH  378 (380)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RP-s~~evl~~L~~l~  378 (380)
                      ..     ......+..+.+++.+|++.||.+|| +++++.+.|+.+.
T Consensus       233 ~~-----~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~  274 (294)
T 4eqm_A          233 TT-----DVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVL  274 (294)
T ss_dssp             HH-----HSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSS
T ss_pred             ch-----hcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHH
Confidence            00     01112345688999999999999999 8999999998763


No 44 
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00  E-value=1.9e-44  Score=330.62  Aligned_cols=252  Identities=23%  Similarity=0.342  Sum_probs=193.7

Q ss_pred             cccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHc--CCCCCcceeeEEEec----CC
Q 047245          101 ENRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLAS--LRHRNLMSLRAYVPE----SS  174 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~----~~  174 (380)
                      ..+.||+|+||.||+|.. +|+.||||++...           ....+..|.+++..  ++||||+++++++..    ..
T Consensus        12 ~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-----------~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~   79 (301)
T 3q4u_A           12 LLECVGKGRYGEVWRGSW-QGENVAVKIFSSR-----------DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSST   79 (301)
T ss_dssp             EEEEEEECSSEEEEEEEE-TTEEEEEEEECGG-----------GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEE
T ss_pred             EEEeeccCCCcEEEEEEE-CCEEEEEEEeccc-----------cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCc
Confidence            457899999999999988 6899999998641           11344556666555  799999999998644    34


Q ss_pred             eEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcC-----CCCeEecCCCCCcEEeCCCCceEE
Q 047245          175 RFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTC-----NPQILHYNLKPTNVMLDAEFTPRL  249 (380)
Q Consensus       175 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-----~~~iiH~dlk~~Nill~~~~~~kl  249 (380)
                      ..++||||+++|+|.++++     ...+++..++.++.|++.||+|||+..     +.+++||||||+|||++.++.+||
T Consensus        80 ~~~lv~e~~~~g~L~~~l~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl  154 (301)
T 3q4u_A           80 QLWLITHYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCI  154 (301)
T ss_dssp             EEEEEECCCTTCBHHHHHT-----TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEE
T ss_pred             eeEEehhhccCCCHHHHHh-----hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEE
Confidence            6899999999999999996     346899999999999999999999432     678999999999999999999999


Q ss_pred             eccCCcccCCC----------CCcCCCcccCcccccCC------CCCCcchhhHHHHHHHHHHhC----------CCCCC
Q 047245          250 ADFGLAKLMPG----------SLIATSAYSAPECFQNR------SYTDKSDIFSFGMILAVLLTG----------RDPTA  303 (380)
Q Consensus       250 ~Dfgl~~~~~~----------~~~~~~~y~aPE~~~~~------~~~~~sDv~s~Gvil~el~tg----------~~p~~  303 (380)
                      +|||+++....          ...||+.|+|||.+.+.      .++.++||||||+++|||++|          ..||.
T Consensus       155 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~  234 (301)
T 3q4u_A          155 ADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFY  234 (301)
T ss_dssp             CCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred             eeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccccc
Confidence            99999864321          23689999999999876      455799999999999999999          77765


Q ss_pred             chhhhccCCCCHHHHHHHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhcc
Q 047245          304 PFFAEAASGGSLGRWLRHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQL  377 (380)
Q Consensus       304 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l  377 (380)
                      ..   ..................     ..+..............+.+++.+||+.||++|||+.|+++.|+++
T Consensus       235 ~~---~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          235 DV---VPNDPSFEDMRKVVCVDQ-----QRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             TT---SCSSCCHHHHHHHHTTSC-----CCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             cc---CCCCcchhhhhHHHhccC-----CCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence            32   111122222222111111     1111111122345678899999999999999999999999999876


No 45 
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00  E-value=1.6e-44  Score=328.29  Aligned_cols=243  Identities=19%  Similarity=0.335  Sum_probs=198.3

Q ss_pred             cccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLVY  180 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  180 (380)
                      ..+.||+|+||.||++...++..||+|++......         .+++.+|+.++.+++||||+++++++.+.+..++||
T Consensus        28 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---------~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   98 (283)
T 3gen_A           28 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS---------EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIIT   98 (283)
T ss_dssp             EEEECC---CEEEEEEEETTTEEEEEEEECTTSBC---------HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred             hHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCC---------HHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEE
Confidence            45789999999999999988889999999752211         256889999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCCC
Q 047245          181 DYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMPG  260 (380)
Q Consensus       181 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~  260 (380)
                      ||+++|+|.+++..   ....+++..++.++.|++.||+|||   +.+++||||||+||+++.++.+||+|||+++....
T Consensus        99 e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~  172 (283)
T 3gen_A           99 EYMANGCLLNYLRE---MRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD  172 (283)
T ss_dssp             CCCTTCBHHHHHHC---GGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCC
T ss_pred             eccCCCcHHHHHHH---hccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEccccccccccc
Confidence            99999999999973   2346999999999999999999999   89999999999999999999999999999976532


Q ss_pred             -------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhh
Q 047245          261 -------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREAL  332 (380)
Q Consensus       261 -------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  332 (380)
                             ...+++.|+|||.+.+..++.++||||||+++|||++ |+.||...        ............      .
T Consensus       173 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~--------~~~~~~~~~~~~------~  238 (283)
T 3gen_A          173 DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF--------TNSETAEHIAQG------L  238 (283)
T ss_dssp             HHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTS--------CHHHHHHHHHTT------C
T ss_pred             cccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCcccc--------ChhHHHHHHhcc------c
Confidence                   2346778999999998899999999999999999998 99998642        111111111111      0


Q ss_pred             chhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhcc
Q 047245          333 DRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQL  377 (380)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l  377 (380)
                      .     ...+......+.+++.+||+.||.+|||++|+++.|+++
T Consensus       239 ~-----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~  278 (283)
T 3gen_A          239 R-----LYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDV  278 (283)
T ss_dssp             C-----CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             C-----CCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence            0     111122345688999999999999999999999999876


No 46 
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.3e-44  Score=343.17  Aligned_cols=250  Identities=22%  Similarity=0.375  Sum_probs=203.3

Q ss_pred             ccccccCccCCeeEEEEEe--------cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcC-CCCCcceeeEEE
Q 047245          100 NENRLLGSSPDGKYYRTVL--------DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASL-RHRNLMSLRAYV  170 (380)
Q Consensus       100 ~~~~~lg~G~~g~vy~~~~--------~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~  170 (380)
                      ...+.||+|+||.||++..        .++..||+|++...       ......+.+.+|+++++++ +||||+++++++
T Consensus        72 ~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-------~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~  144 (382)
T 3tt0_A           72 VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD-------ATEKDLSDLISEMEMMKMIGKHKNIINLLGAC  144 (382)
T ss_dssp             EEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTT-------CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             EeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccc-------cCHHHHHHHHHHHHHHHHhcCCchhhhheeee
Confidence            3557899999999999985        23467999998642       1234457889999999999 999999999999


Q ss_pred             ecCCeEEEEEeecCCCCHHHHHHHhhh------------cccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCc
Q 047245          171 PESSRFYLVYDYLQTGSLEDAMDRIRE------------NQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTN  238 (380)
Q Consensus       171 ~~~~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~N  238 (380)
                      .+.+..++||||+++|+|.+++.....            ....+++..++.++.|++.||+|||   +.+++||||||+|
T Consensus       145 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~N  221 (382)
T 3tt0_A          145 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARN  221 (382)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGG
T ss_pred             ccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcce
Confidence            999999999999999999999986331            1245999999999999999999999   8899999999999


Q ss_pred             EEeCCCCceEEeccCCcccCCC--------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhc
Q 047245          239 VMLDAEFTPRLADFGLAKLMPG--------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEA  309 (380)
Q Consensus       239 ill~~~~~~kl~Dfgl~~~~~~--------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~  309 (380)
                      ||++.++.+||+|||+++....        ...+|+.|+|||.+.+..++.++||||||+++|||++ |..||...    
T Consensus       222 Ill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~----  297 (382)
T 3tt0_A          222 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV----  297 (382)
T ss_dssp             EEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC----
T ss_pred             EEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC----
Confidence            9999999999999999986532        2246788999999999999999999999999999999 99998531    


Q ss_pred             cCCCCHHHHHHHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          310 ASGGSLGRWLRHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       310 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                          ...+..........           ...+......+.+++.+||+.||++|||++|+++.|+++.
T Consensus       298 ----~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~  351 (382)
T 3tt0_A          298 ----PVEELFKLLKEGHR-----------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV  351 (382)
T ss_dssp             ----CHHHHHHHHHTTCC-----------CCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ----CHHHHHHHHHcCCC-----------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence                12222222221110           0111223456889999999999999999999999998764


No 47 
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00  E-value=8.8e-45  Score=339.03  Aligned_cols=249  Identities=21%  Similarity=0.369  Sum_probs=202.7

Q ss_pred             cccccCccCCeeEEEEEec------CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCC
Q 047245          101 ENRLLGSSPDGKYYRTVLD------NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESS  174 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  174 (380)
                      ..+.||+|+||.||++...      ++..||+|++...       ......+.+.+|+.++++++||||+++++++.+.+
T Consensus        51 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-------~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~  123 (343)
T 1luf_A           51 YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE-------ASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK  123 (343)
T ss_dssp             EEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTT-------CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred             eeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccc-------cCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC
Confidence            4578999999999999974      3478999998642       12344578999999999999999999999999999


Q ss_pred             eEEEEEeecCCCCHHHHHHHhhhc--------------------ccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCC
Q 047245          175 RFYLVYDYLQTGSLEDAMDRIREN--------------------QLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNL  234 (380)
Q Consensus       175 ~~~lv~e~~~~gsL~~~l~~~~~~--------------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dl  234 (380)
                      ..++||||+++|+|.+++......                    ...+++..++.++.|++.||+|||   +.+++||||
T Consensus       124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dl  200 (343)
T 1luf_A          124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDL  200 (343)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCC
T ss_pred             ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCC
Confidence            999999999999999999853211                    257999999999999999999999   899999999


Q ss_pred             CCCcEEeCCCCceEEeccCCcccCC--------CCCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCch
Q 047245          235 KPTNVMLDAEFTPRLADFGLAKLMP--------GSLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPF  305 (380)
Q Consensus       235 k~~Nill~~~~~~kl~Dfgl~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~  305 (380)
                      ||+||+++.++.+||+|||+++...        ....+++.|+|||.+.+..++.++||||||+++|||++ |..||...
T Consensus       201 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~  280 (343)
T 1luf_A          201 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM  280 (343)
T ss_dssp             SGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred             CcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCC
Confidence            9999999999999999999986432        22357889999999998899999999999999999999 99998631


Q ss_pred             hhhccCCCCHHHHHHHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          306 FAEAASGGSLGRWLRHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       306 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                              ...+........ ..          ...+......+.+++.+||+.||++|||+.++++.|+++.
T Consensus       281 --------~~~~~~~~~~~~-~~----------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~  334 (343)
T 1luf_A          281 --------AHEEVIYYVRDG-NI----------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC  334 (343)
T ss_dssp             --------CHHHHHHHHHTT-CC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             --------ChHHHHHHHhCC-Cc----------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHH
Confidence                    112222221111 10          0111233456889999999999999999999999999874


No 48 
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00  E-value=1.2e-44  Score=333.94  Aligned_cols=248  Identities=23%  Similarity=0.355  Sum_probs=201.0

Q ss_pred             cccccCccCCeeEEEEEe------cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCC
Q 047245          101 ENRLLGSSPDGKYYRTVL------DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESS  174 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  174 (380)
                      ..+.||+|+||.||++..      .++..||+|++...       ......+.+.+|+.++++++||||+++++++.+.+
T Consensus        27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~-------~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   99 (314)
T 2ivs_A           27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN-------ASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG   99 (314)
T ss_dssp             EEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTT-------CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred             eeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCC-------CCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC
Confidence            457899999999999986      34578999998641       12344578899999999999999999999999999


Q ss_pred             eEEEEEeecCCCCHHHHHHHhhh--------------------cccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCC
Q 047245          175 RFYLVYDYLQTGSLEDAMDRIRE--------------------NQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNL  234 (380)
Q Consensus       175 ~~~lv~e~~~~gsL~~~l~~~~~--------------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dl  234 (380)
                      ..++||||+++|+|.+++.....                    ....+++..++.++.|++.||+|||   +.+++||||
T Consensus       100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~di  176 (314)
T 2ivs_A          100 PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDL  176 (314)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEECCCC
T ss_pred             ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCccccc
Confidence            99999999999999999986332                    1234889999999999999999999   899999999


Q ss_pred             CCCcEEeCCCCceEEeccCCcccCCC--------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCch
Q 047245          235 KPTNVMLDAEFTPRLADFGLAKLMPG--------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPF  305 (380)
Q Consensus       235 k~~Nill~~~~~~kl~Dfgl~~~~~~--------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~  305 (380)
                      ||+||+++.++.+||+|||+++....        ...+++.|+|||.+.+..++.++||||||+++|||++ |..||...
T Consensus       177 kp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~  256 (314)
T 2ivs_A          177 AARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI  256 (314)
T ss_dssp             SGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             chheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            99999999999999999999976532        2246778999999999899999999999999999999 99998631


Q ss_pred             hhhccCCCCHHHHHHHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhcc
Q 047245          306 FAEAASGGSLGRWLRHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQL  377 (380)
Q Consensus       306 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l  377 (380)
                      ..        ........          .... ...+......+.+++.+||+.||++|||+.|+++.|+++
T Consensus       257 ~~--------~~~~~~~~----------~~~~-~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~  309 (314)
T 2ivs_A          257 PP--------ERLFNLLK----------TGHR-MERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM  309 (314)
T ss_dssp             CG--------GGHHHHHH----------TTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CH--------HHHHHHhh----------cCCc-CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            11        01111111          1100 111123445688999999999999999999999999876


No 49 
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00  E-value=4.6e-44  Score=335.55  Aligned_cols=251  Identities=20%  Similarity=0.292  Sum_probs=198.9

Q ss_pred             hccccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEE
Q 047245           99 ANENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFY  177 (380)
Q Consensus        99 ~~~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  177 (380)
                      ....+.||+|+||.||++.. .+|+.||+|++.......   ......+.+.+|+.++++++||||+++++++.+.+..+
T Consensus        26 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  102 (351)
T 3c0i_A           26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTS---SPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY  102 (351)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHT---SSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             eEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccc---cccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            34567899999999999986 468999999986421100   00112367889999999999999999999999999999


Q ss_pred             EEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCc---eEEeccCC
Q 047245          178 LVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFT---PRLADFGL  254 (380)
Q Consensus       178 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~---~kl~Dfgl  254 (380)
                      +||||+++|+|.+++.........+++..+..++.|++.||+|||   +.+++||||||+|||++.++.   +||+|||+
T Consensus       103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~  179 (351)
T 3c0i_A          103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGV  179 (351)
T ss_dssp             EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred             EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEecCcc
Confidence            999999999999998765444556899999999999999999999   899999999999999986654   99999999


Q ss_pred             cccCCC------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcch
Q 047245          255 AKLMPG------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEA  328 (380)
Q Consensus       255 ~~~~~~------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~  328 (380)
                      ++....      ...||+.|+|||.+.+..++.++||||||+++|||++|..||....         .............
T Consensus       180 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~---------~~~~~~i~~~~~~  250 (351)
T 3c0i_A          180 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK---------ERLFEGIIKGKYK  250 (351)
T ss_dssp             CEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH---------HHHHHHHHHTCCC
T ss_pred             eeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH---------HHHHHHHHcCCCC
Confidence            976543      2458999999999999999999999999999999999999986411         1111111111000


Q ss_pred             hHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          329 REALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                         ..+.     ........+.+++.+||+.||++|||+.|+++
T Consensus       251 ---~~~~-----~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          251 ---MNPR-----QWSHISESAKDLVRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             ---CCHH-----HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ---CCcc-----ccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence               0000     00123456889999999999999999999974


No 50 
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00  E-value=5.7e-44  Score=328.77  Aligned_cols=250  Identities=21%  Similarity=0.376  Sum_probs=196.8

Q ss_pred             ccccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          100 NENRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       100 ~~~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ...+.||+|+||.||+|...  ..+|+|.++....      .....+.+.+|+.++++++||||+++++++.. +..++|
T Consensus        39 ~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv  109 (307)
T 3lb7_A           39 MLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDP------TPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIV  109 (307)
T ss_dssp             CEEEEEEECSSCEEEEEESS--SEEEEEECCCSSC------CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEE
T ss_pred             EEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCC------CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEEE
Confidence            35578999999999999864  3699998875322      23445789999999999999999999998754 558999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||+++|+|.+++..   ....+++..++.++.|++.||+|||   +.+++||||||+|||+++++.+||+|||+++...
T Consensus       110 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~  183 (307)
T 3lb7_A          110 TQWCEGSSLYKHLHV---QETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKS  183 (307)
T ss_dssp             EECCSSCBHHHHHHT---SCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCSSSEEECTTSCEEECCCCSSCC--
T ss_pred             EecCCCCcHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCChhhEEEcCCCCEEEccCCCceecc
Confidence            999999999999863   3557999999999999999999999   8899999999999999999999999999997543


Q ss_pred             C--------CCcCCCcccCccccc---CCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcch
Q 047245          260 G--------SLIATSAYSAPECFQ---NRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEA  328 (380)
Q Consensus       260 ~--------~~~~~~~y~aPE~~~---~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~  328 (380)
                      .        ...||+.|+|||.+.   +..++.++||||||+++|||++|+.||...       ......... ...+. 
T Consensus       184 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~-------~~~~~~~~~-~~~~~-  254 (307)
T 3lb7_A          184 RWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHI-------NNRDQIIFM-VGRGY-  254 (307)
T ss_dssp             ----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTC-------CCHHHHHHH-HHHTC-
T ss_pred             cccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccC-------CcHHHHHHH-HhcCC-
Confidence            1        235899999999986   567889999999999999999999998631       111111111 11110 


Q ss_pred             hHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          329 REALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                         ..+.+  ..........+.+++.+||+.+|++|||+.|+++.|+.+.
T Consensus       255 ---~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~  299 (307)
T 3lb7_A          255 ---ASPDL--SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ  299 (307)
T ss_dssp             ---CCCCS--TTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHH
T ss_pred             ---CCcch--hhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHH
Confidence               01111  0111223456889999999999999999999999998874


No 51 
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=6.6e-44  Score=330.34  Aligned_cols=241  Identities=20%  Similarity=0.339  Sum_probs=196.8

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++... +|..+|+|.+...         ......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus         9 ~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~---------~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv   79 (321)
T 1tki_A            9 IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK---------GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMI   79 (321)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEECCC---------THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEE
T ss_pred             eeeEEecCCCeEEEEEEECCCCcEEEEEEEecC---------cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEE
Confidence            3567999999999999974 6889999998641         12236688999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCC--CCceEEeccCCccc
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDA--EFTPRLADFGLAKL  257 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~--~~~~kl~Dfgl~~~  257 (380)
                      |||+++|+|.+++..   ....+++..+..++.|++.||+|||   +.+++||||||+|||++.  ++.+||+|||+++.
T Consensus        80 ~e~~~g~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~  153 (321)
T 1tki_A           80 FEFISGLDIFERINT---SAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQ  153 (321)
T ss_dssp             ECCCCCCBHHHHHTS---SSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEE
T ss_pred             EEeCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeE
Confidence            999999999999863   2346899999999999999999999   899999999999999987  78999999999987


Q ss_pred             CCCC-----CcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhh
Q 047245          258 MPGS-----LIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREAL  332 (380)
Q Consensus       258 ~~~~-----~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  332 (380)
                      ....     ..+|+.|+|||.+.+..++.++||||||+++|||++|..||...        ...............   .
T Consensus       154 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~--------~~~~~~~~i~~~~~~---~  222 (321)
T 1tki_A          154 LKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAE--------TNQQIIENIMNAEYT---F  222 (321)
T ss_dssp             CCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCS--------SHHHHHHHHHHTCCC---C
T ss_pred             CCCCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCC--------CHHHHHHHHHcCCCC---C
Confidence            6543     24899999999999988999999999999999999999998631        112222222211100   0


Q ss_pred             chhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          333 DRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      +.     ......+..+.+++.+||+.||.+|||+.|+++
T Consensus       223 ~~-----~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~  257 (321)
T 1tki_A          223 DE-----EAFKEISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             CH-----HHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             Ch-----hhhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            00     000123456889999999999999999999986


No 52 
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00  E-value=5.7e-45  Score=352.91  Aligned_cols=245  Identities=24%  Similarity=0.378  Sum_probs=198.8

Q ss_pred             ccccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          100 NENRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       100 ~~~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ...+.||+|+||.||+|...++..||||++.....         ..+.|.+|+.++++++||||+++++++.+ +..++|
T Consensus       187 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv  256 (452)
T 1fmk_A          187 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---------SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV  256 (452)
T ss_dssp             EEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS---------CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred             eeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC---------CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEE
Confidence            35678999999999999998888999999875221         12578999999999999999999999976 678999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||+++|+|.+++...  ....+++..++.++.|++.||+|||   +.+++||||||+|||+++++.+||+|||+++...
T Consensus       257 ~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~  331 (452)
T 1fmk_A          257 TEYMSKGSLLDFLKGE--TGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIE  331 (452)
T ss_dssp             ECCCTTCBHHHHHSHH--HHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC---
T ss_pred             ehhhcCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccceecC
Confidence            9999999999999742  2346899999999999999999999   8999999999999999999999999999998654


Q ss_pred             CC-------CcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhccCCCCHHHHHHHHHhhcchhHh
Q 047245          260 GS-------LIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREA  331 (380)
Q Consensus       260 ~~-------~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  331 (380)
                      ..       ..++..|+|||.+.+..++.++||||||+++|||++ |+.||...        ...+.........     
T Consensus       332 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~--------~~~~~~~~i~~~~-----  398 (452)
T 1fmk_A          332 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM--------VNREVLDQVERGY-----  398 (452)
T ss_dssp             -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC--------CHHHHHHHHHTTC-----
T ss_pred             CCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCC--------CHHHHHHHHHcCC-----
Confidence            32       236778999999999999999999999999999999 99998531        1112222211110     


Q ss_pred             hchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          332 LDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                            ....+...+..+.+++.+||+.||++|||++++++.|+++.
T Consensus       399 ------~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~  439 (452)
T 1fmk_A          399 ------RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF  439 (452)
T ss_dssp             ------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred             ------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence                  01112234556889999999999999999999999999873


No 53 
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00  E-value=1.1e-43  Score=323.54  Aligned_cols=252  Identities=25%  Similarity=0.440  Sum_probs=198.0

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++.. .+++.||+|++......... ......+.+.+|+.++++++||||+++++++.+..  ++|
T Consensus        23 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~lv   99 (287)
T 4f0f_A           23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGET-EMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMV   99 (287)
T ss_dssp             EEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCH-HHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--EEE
T ss_pred             ehhccccCCceeEEEEEEcCCceEEEEEEeeccccccch-hHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--eEE
Confidence            457899999999999997 57899999998753222111 01111267889999999999999999999997665  699


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCC--eEecCCCCCcEEeCCCCc-----eEEecc
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQ--ILHYNLKPTNVMLDAEFT-----PRLADF  252 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--iiH~dlk~~Nill~~~~~-----~kl~Df  252 (380)
                      |||+++|+|.+++..   ....+++..++.++.|++.||+|||   +.+  ++||||||+||+++.++.     +||+||
T Consensus       100 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df  173 (287)
T 4f0f_A          100 MEFVPCGDLYHRLLD---KAHPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADF  173 (287)
T ss_dssp             EECCTTCBHHHHHHC---TTSCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred             EEecCCCCHHHHHhc---ccCCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence            999999999998863   3457999999999999999999999   888  999999999999988776     999999


Q ss_pred             CCcccCCCC---CcCCCcccCccccc--CCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcc
Q 047245          253 GLAKLMPGS---LIATSAYSAPECFQ--NRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGE  327 (380)
Q Consensus       253 gl~~~~~~~---~~~~~~y~aPE~~~--~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~  327 (380)
                      |+++.....   ..+++.|+|||.+.  ...++.++||||||+++|||++|+.||....      ..-..........+ 
T Consensus       174 g~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~------~~~~~~~~~~~~~~-  246 (287)
T 4f0f_A          174 GLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS------YGKIKFINMIREEG-  246 (287)
T ss_dssp             TTCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCC------CCHHHHHHHHHHSC-
T ss_pred             CccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccc------ccHHHHHHHHhccC-
Confidence            999865543   45899999999984  4567899999999999999999999986311      11111111111111 


Q ss_pred             hhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhcc
Q 047245          328 AREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQL  377 (380)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l  377 (380)
                               .....+......+.+++.+||+.||++|||++|+++.|++|
T Consensus       247 ---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          247 ---------LRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             ---------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             ---------CCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence                     01112233455688999999999999999999999999875


No 54 
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00  E-value=4.9e-44  Score=329.46  Aligned_cols=255  Identities=20%  Similarity=0.378  Sum_probs=199.5

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++.. .+|..||+|++.....     ........+.+|+.++++++||||+++++++.+.+..++|
T Consensus        36 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv  110 (310)
T 2wqm_A           36 IEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDL-----MDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV  110 (310)
T ss_dssp             EEEEEECC--CEEEEEEETTTCCEEEEEEECTTSS-----CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             EEEeecCCCCceEEEEEEcCCCceEEEEeeehhhc-----cCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence            457899999999999996 5789999999975222     1234557889999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||+++|+|.+++.........+++..++.++.|++.||+|||   +.+++||||||+||+++.++.+||+|||++....
T Consensus       111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~  187 (310)
T 2wqm_A          111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS  187 (310)
T ss_dssp             EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred             EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence            9999999999999876555677999999999999999999999   8999999999999999999999999999987654


Q ss_pred             C------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhhc
Q 047245          260 G------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREALD  333 (380)
Q Consensus       260 ~------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  333 (380)
                      .      ...+++.|+|||.+.+..++.++||||||+++|||++|..||...      ...............      .
T Consensus       188 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~------~~~~~~~~~~~~~~~------~  255 (310)
T 2wqm_A          188 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD------KMNLYSLCKKIEQCD------Y  255 (310)
T ss_dssp             -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---------CCHHHHHHHHHTTC------S
T ss_pred             CCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCccc------chhHHHHHHHhhccc------C
Confidence            3      235889999999999999999999999999999999999998531      112222222221111      0


Q ss_pred             hhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhcccC
Q 047245          334 RSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLHS  379 (380)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~~  379 (380)
                      +...    .......+.+++.+||+.||++|||+.++++.|+++++
T Consensus       256 ~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~  297 (310)
T 2wqm_A          256 PPLP----SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHA  297 (310)
T ss_dssp             CCCC----TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCc----ccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence            0111    11234468899999999999999999999999998863


No 55 
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00  E-value=7.8e-45  Score=337.54  Aligned_cols=245  Identities=24%  Similarity=0.370  Sum_probs=191.7

Q ss_pred             cccccCccCCeeEEEEEe-cCCcE----EEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCe
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLT----VAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSR  175 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~----vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  175 (380)
                      ..+.||+|+||.||+|.. .+|+.    ||+|.+....       .....+.+.+|+.++++++||||+++++++.++. 
T Consensus        19 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-   90 (327)
T 3poz_A           19 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-------SPKANKEILDEAYVMASVDNPHVCRLLGICLTST-   90 (327)
T ss_dssp             EEEEEEEETTEEEEEEEECC----CCEEEEEEEC--------------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-
T ss_pred             cceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc-------CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-
Confidence            457899999999999996 34444    5777765311       1223477899999999999999999999998765 


Q ss_pred             EEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCc
Q 047245          176 FYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLA  255 (380)
Q Consensus       176 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~  255 (380)
                      .++|+||+++|+|.+++..   ....+++..++.++.|++.||+|||   +.+++||||||+|||++.++.+||+|||++
T Consensus        91 ~~~v~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a  164 (327)
T 3poz_A           91 VQLITQLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLA  164 (327)
T ss_dssp             EEEEEECCTTCBHHHHHHH---STTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHH
T ss_pred             eEEEEEecCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCcce
Confidence            7899999999999999974   2456999999999999999999999   889999999999999999999999999998


Q ss_pred             ccCCC--------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhccCCCCHHHHHHHHHhhc
Q 047245          256 KLMPG--------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEAASGGSLGRWLRHLQHAG  326 (380)
Q Consensus       256 ~~~~~--------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~l~~~~~~~~~~~  326 (380)
                      +....        ...+|+.|+|||.+.+..++.++||||||+++|||++ |..||......                  
T Consensus       165 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~------------------  226 (327)
T 3poz_A          165 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS------------------  226 (327)
T ss_dssp             HHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG------------------
T ss_pred             eEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH------------------
Confidence            75432        1236778999999999999999999999999999999 99998641110                  


Q ss_pred             chhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          327 EAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                      .....+..... ...+......+.+++.+||+.||++|||+.|+++.|+.+.
T Consensus       227 ~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~  277 (327)
T 3poz_A          227 EISSILEKGER-LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA  277 (327)
T ss_dssp             GHHHHHHTTCC-CCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCC-CCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence            11111111110 1112234456889999999999999999999999998763


No 56 
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00  E-value=7.7e-44  Score=330.78  Aligned_cols=240  Identities=22%  Similarity=0.348  Sum_probs=191.4

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCC-----
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESS-----  174 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----  174 (380)
                      ..+.||+|+||.||++... +|+.||||++....       .....+.+.+|+.++++++||||+++++++.+..     
T Consensus        10 ~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~   82 (332)
T 3qd2_B           10 PIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-------RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQ   82 (332)
T ss_dssp             EEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS-------TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHH
T ss_pred             eeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC-------chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhh
Confidence            4578999999999999985 79999999997522       1223477899999999999999999999985543     


Q ss_pred             ----------------------------------------------------eEEEEEeecCCCCHHHHHHHhhhcccCC
Q 047245          175 ----------------------------------------------------RFYLVYDYLQTGSLEDAMDRIRENQLQL  202 (380)
Q Consensus       175 ----------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~~~~~l  202 (380)
                                                                          ..++||||+++|+|.+++.... .....
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~  161 (332)
T 3qd2_B           83 EEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC-SLEDR  161 (332)
T ss_dssp             HHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCC-SGGGS
T ss_pred             hhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc-Cccch
Confidence                                                                3899999999999999997532 23456


Q ss_pred             CHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCCCC------------------CcC
Q 047245          203 GWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMPGS------------------LIA  264 (380)
Q Consensus       203 ~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~------------------~~~  264 (380)
                      ++..++.++.|++.||+|||   +.+++||||||+||+++.++.+||+|||+++.....                  ..|
T Consensus       162 ~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~g  238 (332)
T 3qd2_B          162 EHGVCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVG  238 (332)
T ss_dssp             CHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-
T ss_pred             hhHHHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCC
Confidence            77889999999999999999   899999999999999999999999999999765432                  348


Q ss_pred             CCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhhchhccCCcccHH
Q 047245          265 TSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREALDRSILGEEVEED  344 (380)
Q Consensus       265 ~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (380)
                      |+.|+|||.+.+..++.++||||||+++|||++|..|+...          ........ ..          ........
T Consensus       239 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~----------~~~~~~~~-~~----------~~~~~~~~  297 (332)
T 3qd2_B          239 TKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER----------VRIITDVR-NL----------KFPLLFTQ  297 (332)
T ss_dssp             CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH----------HHHHHHHH-TT----------CCCHHHHH
T ss_pred             CcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH----------HHHHHHhh-cc----------CCCccccc
Confidence            99999999999999999999999999999999988774210          00000000 00          00111233


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          345 EMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       345 ~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      ....+.+++.+||+.||++|||++|+++
T Consensus       298 ~~~~~~~li~~~l~~~p~~Rps~~~~l~  325 (332)
T 3qd2_B          298 KYPQEHMMVQDMLSPSPTERPEATDIIE  325 (332)
T ss_dssp             HCHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred             CChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence            4556789999999999999999999986


No 57 
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00  E-value=5.8e-44  Score=329.33  Aligned_cols=239  Identities=21%  Similarity=0.261  Sum_probs=188.4

Q ss_pred             hccccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcC-CCCCcceeeEEEecCCeE
Q 047245           99 ANENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASL-RHRNLMSLRAYVPESSRF  176 (380)
Q Consensus        99 ~~~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~  176 (380)
                      ....+.||+|+||+||+|... +|+.||||++.....      .......+..|+..+.++ +||||+++++++.+++..
T Consensus        59 y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~  132 (311)
T 3p1a_A           59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFR------GPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGIL  132 (311)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCC------SHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred             eeeeheeccCCCeEEEEEEECCCCeEEEEEEeccccc------ChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEE
Confidence            345678999999999999985 799999999764221      122234455566655555 999999999999999999


Q ss_pred             EEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcc
Q 047245          177 YLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAK  256 (380)
Q Consensus       177 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~  256 (380)
                      ++||||+ +++|.+++...   ...++|..++.++.|++.||+|||   +.+++||||||+|||++.++.+||+|||++.
T Consensus       133 ~lv~e~~-~~~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~  205 (311)
T 3p1a_A          133 YLQTELC-GPSLQQHCEAW---GASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLV  205 (311)
T ss_dssp             EEEEECC-CCBHHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEECCCTTCE
T ss_pred             EEEEecc-CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEccceeee
Confidence            9999999 67999988742   456999999999999999999999   8899999999999999999999999999987


Q ss_pred             cCCC-----CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHh
Q 047245          257 LMPG-----SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREA  331 (380)
Q Consensus       257 ~~~~-----~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  331 (380)
                      ....     ...||+.|+|||.+.+ .++.++||||||+++|||++|..|+...          ..|. .. ..+..   
T Consensus       206 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~----------~~~~-~~-~~~~~---  269 (311)
T 3p1a_A          206 ELGTAGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG----------EGWQ-QL-RQGYL---  269 (311)
T ss_dssp             ECC------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH----------HHHH-HH-TTTCC---
T ss_pred             ecccCCCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc----------cHHH-HH-hccCC---
Confidence            6543     2348999999998876 7899999999999999999997765421          1111 11 11110   


Q ss_pred             hchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          332 LDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                            ...........+.+++.+||+.||++|||++|+++
T Consensus       270 ------~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          270 ------PPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLA  304 (311)
T ss_dssp             ------CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             ------CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence                  00111123456889999999999999999999985


No 58 
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00  E-value=1.3e-43  Score=330.16  Aligned_cols=240  Identities=22%  Similarity=0.281  Sum_probs=196.3

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++... +|+.||+|++.....     ........+.+|+.+++.++||||+++++++.+.+..++|
T Consensus         9 ~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   83 (337)
T 1o6l_A            9 YLKLLGKGTFGKVILVREKATGRYYAMKILRKEVI-----IAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV   83 (337)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             EEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHh-----hhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence            3568999999999999974 689999999975210     0112246788999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||+++|+|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+|||++.++.+||+|||+++...
T Consensus        84 ~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~  156 (337)
T 1o6l_A           84 MEYANGGELFFHLSR----ERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI  156 (337)
T ss_dssp             EECCTTCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred             EeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhcc
Confidence            999999999999874    346899999999999999999999   8999999999999999999999999999998532


Q ss_pred             C------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhhc
Q 047245          260 G------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREALD  333 (380)
Q Consensus       260 ~------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  333 (380)
                      .      ...||+.|+|||.+.+..++.++||||||+++|||++|..||...        .............       
T Consensus       157 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~--------~~~~~~~~i~~~~-------  221 (337)
T 1o6l_A          157 SDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ--------DHERLFELILMEE-------  221 (337)
T ss_dssp             CTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHCC-------
T ss_pred             cCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCC--------CHHHHHHHHHcCC-------
Confidence            1      235899999999999999999999999999999999999998631        1122222221110       


Q ss_pred             hhccCCcccHHHHHHHHHHHHHcccCCCCCCC-----CHHhHHH
Q 047245          334 RSILGEEVEEDEMLMAVRIAVVCLSDSPADRP-----SSDELVP  372 (380)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RP-----s~~evl~  372 (380)
                           ...+......+.+++.+||+.||++||     +++|+++
T Consensus       222 -----~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~  260 (337)
T 1o6l_A          222 -----IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             -----CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             -----CCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence                 011122345678999999999999999     8888864


No 59 
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00  E-value=9.3e-45  Score=330.62  Aligned_cols=246  Identities=25%  Similarity=0.412  Sum_probs=202.2

Q ss_pred             hccccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEE
Q 047245           99 ANENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFY  177 (380)
Q Consensus        99 ~~~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  177 (380)
                      ....+.||+|+||.||++... ++..||+|.+...         ....+.+.+|+.++++++||||+++++++.+.+..+
T Consensus        15 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---------~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   85 (288)
T 3kfa_A           15 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---------TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY   85 (288)
T ss_dssp             EEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC---------STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEE
T ss_pred             eeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC---------HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEE
Confidence            345678999999999999975 4889999998641         122467889999999999999999999999999999


Q ss_pred             EEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCccc
Q 047245          178 LVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKL  257 (380)
Q Consensus       178 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~  257 (380)
                      +||||+++|+|.+++..  .....+++..++.++.|++.||+|||   +.+++||||||+||+++.++.+||+|||++..
T Consensus        86 ~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~  160 (288)
T 3kfa_A           86 IITEFMTYGNLLDYLRE--CNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL  160 (288)
T ss_dssp             EEEECCTTEEHHHHHHH--CCTTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGT
T ss_pred             EEEEcCCCCcHHHHHHh--cccCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCcccee
Confidence            99999999999999974  23456899999999999999999999   88999999999999999999999999999987


Q ss_pred             CCCCC-------cCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhccCCCCHHHHHHHHHhhcchh
Q 047245          258 MPGSL-------IATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEAASGGSLGRWLRHLQHAGEAR  329 (380)
Q Consensus       258 ~~~~~-------~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~  329 (380)
                      .....       .+++.|+|||.+.+..++.++||||||+++|+|++ |..||....        ......         
T Consensus       161 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~--------~~~~~~---------  223 (288)
T 3kfa_A          161 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID--------LSQVYE---------  223 (288)
T ss_dssp             SCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--------GGGHHH---------
T ss_pred             ccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--------HHHHHH---------
Confidence            65332       35778999999999999999999999999999999 999986311        111111         


Q ss_pred             HhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhcc
Q 047245          330 EALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQL  377 (380)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l  377 (380)
                       .+..... ...+...+..+.+++.+|++.||.+|||++|+++.|+++
T Consensus       224 -~~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~  269 (288)
T 3kfa_A          224 -LLEKDYR-MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM  269 (288)
T ss_dssp             -HHHTTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -HHhccCC-CCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHH
Confidence             1111111 111123445688999999999999999999999999875


No 60 
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00  E-value=1.2e-43  Score=333.44  Aligned_cols=247  Identities=22%  Similarity=0.333  Sum_probs=198.3

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++... +|+.||+|.+.........  .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        16 ~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv   93 (361)
T 2yab_A           16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASR--RGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLI   93 (361)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCS--SSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             EeeEEeeCcCEEEEEEEECCCCCEEEEEEEEcccccccc--chhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEE
Confidence            4578999999999999974 6899999999764322111  111236788999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCC----ceEEeccCCc
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEF----TPRLADFGLA  255 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~----~~kl~Dfgl~  255 (380)
                      |||+++|+|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+|||+++++    .+||+|||++
T Consensus        94 ~e~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a  166 (361)
T 2yab_A           94 LELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA  166 (361)
T ss_dssp             EECCCSCBHHHHHTT----CSCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred             EEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence            999999999999863    457999999999999999999999   89999999999999998876    7999999999


Q ss_pred             ccCCC-----CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhH
Q 047245          256 KLMPG-----SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEARE  330 (380)
Q Consensus       256 ~~~~~-----~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  330 (380)
                      .....     ...||+.|+|||.+.+..++.++||||||+++|+|++|..||...        ..............   
T Consensus       167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~--------~~~~~~~~i~~~~~---  235 (361)
T 2yab_A          167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD--------TKQETLANITAVSY---  235 (361)
T ss_dssp             EECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS--------SHHHHHHHHHTTCC---
T ss_pred             eEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCC--------CHHHHHHHHHhcCC---
Confidence            86543     345899999999999999999999999999999999999998631        11122222111100   


Q ss_pred             hhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          331 ALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      .+++.     ........+.+++.+||+.||.+|||+.|+++
T Consensus       236 ~~~~~-----~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  272 (361)
T 2yab_A          236 DFDEE-----FFSQTSELAKDFIRKLLVKETRKRLTIQEALR  272 (361)
T ss_dssp             CCCHH-----HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CCCch-----hccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            00000     00123455789999999999999999999874


No 61 
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00  E-value=7.6e-45  Score=341.65  Aligned_cols=250  Identities=24%  Similarity=0.365  Sum_probs=198.9

Q ss_pred             cccccCccCCeeEEEEEe------cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcC-CCCCcceeeEEEecC
Q 047245          101 ENRLLGSSPDGKYYRTVL------DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASL-RHRNLMSLRAYVPES  173 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~  173 (380)
                      ..+.||+|+||.||++..      .+++.||||++...       ......+.+.+|++++.++ +||||+++++++.+.
T Consensus        26 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-------~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~   98 (359)
T 3vhe_A           26 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG-------ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP   98 (359)
T ss_dssp             EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT-------CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred             eceeecCCCCceEEEEEeccccccccceEEEEEEecCc-------CCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecC
Confidence            567899999999999974      35679999999641       1233457899999999999 799999999999875


Q ss_pred             C-eEEEEEeecCCCCHHHHHHHhhhc------------------------------------------------------
Q 047245          174 S-RFYLVYDYLQTGSLEDAMDRIREN------------------------------------------------------  198 (380)
Q Consensus       174 ~-~~~lv~e~~~~gsL~~~l~~~~~~------------------------------------------------------  198 (380)
                      + ..++||||+++|+|.+++......                                                      
T Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (359)
T 3vhe_A           99 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEE  178 (359)
T ss_dssp             TSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------------
T ss_pred             CCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhh
Confidence            5 489999999999999999753221                                                      


Q ss_pred             --------ccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCCC--------CC
Q 047245          199 --------QLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMPG--------SL  262 (380)
Q Consensus       199 --------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~--------~~  262 (380)
                              ...+++..++.++.|++.||+|||   +.+++||||||+|||++.++.+||+|||+++....        ..
T Consensus       179 ~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  255 (359)
T 3vhe_A          179 EEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA  255 (359)
T ss_dssp             -----CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--C
T ss_pred             cccccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhcccc
Confidence                    112889999999999999999999   88999999999999999999999999999986532        23


Q ss_pred             cCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhhchhccCCcc
Q 047245          263 IATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREALDRSILGEEV  341 (380)
Q Consensus       263 ~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (380)
                      .+|+.|+|||.+.+..++.++||||||+++|||++ |..||....       ........... +.     .     ...
T Consensus       256 ~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~-------~~~~~~~~~~~-~~-----~-----~~~  317 (359)
T 3vhe_A          256 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK-------IDEEFCRRLKE-GT-----R-----MRA  317 (359)
T ss_dssp             EECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC-------CSHHHHHHHHH-TC-----C-----CCC
T ss_pred             CCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccc-------hhHHHHHHHHc-CC-----C-----CCC
Confidence            47888999999999999999999999999999998 999985310       00111111111 10     0     111


Q ss_pred             cHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          342 EEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       342 ~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                      +......+.+++..||+.||++|||++|+++.|+++.
T Consensus       318 ~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~  354 (359)
T 3vhe_A          318 PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL  354 (359)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence            1223455889999999999999999999999998763


No 62 
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00  E-value=1e-43  Score=328.28  Aligned_cols=251  Identities=22%  Similarity=0.341  Sum_probs=200.5

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEe----cCCe
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVP----ESSR  175 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~----~~~~  175 (380)
                      ..+.||+|+||.||++.. .+|+.||+|++...        .....+.+.+|+.++++++||||+++++++.    ....
T Consensus        33 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  104 (317)
T 2buj_A           33 FIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH--------EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHE  104 (317)
T ss_dssp             EEEEEEC--CEEEEEEEETTTCCEEEEEEEEES--------SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEE
T ss_pred             EEEEecCCCCeEEEEEEecCCCcEEEEEEEecC--------CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCce
Confidence            457899999999999997 67899999998651        2344578899999999999999999999986    3457


Q ss_pred             EEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCc
Q 047245          176 FYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLA  255 (380)
Q Consensus       176 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~  255 (380)
                      .++|+||+++|+|.+++.........+++..++.++.|++.||+|||   +.+++||||||+||+++.++.+||+|||++
T Consensus       105 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~  181 (317)
T 2buj_A          105 AWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSM  181 (317)
T ss_dssp             EEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred             eEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence            89999999999999999876555678999999999999999999999   889999999999999999999999999998


Q ss_pred             ccCCCC---------------CcCCCcccCcccccCCC---CCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHH
Q 047245          256 KLMPGS---------------LIATSAYSAPECFQNRS---YTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGR  317 (380)
Q Consensus       256 ~~~~~~---------------~~~~~~y~aPE~~~~~~---~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~  317 (380)
                      ......               ..+++.|+|||.+.+..   ++.++||||||+++|||++|..||......   ......
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~~~  258 (317)
T 2buj_A          182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK---GDSVAL  258 (317)
T ss_dssp             EESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHT---TSCHHH
T ss_pred             hhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcc---cchhhH
Confidence            765421               12689999999987654   689999999999999999999998532111   111111


Q ss_pred             HHHHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhcccC
Q 047245          318 WLRHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLHS  379 (380)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~~  379 (380)
                      .             +..... ..........+.+++.+||+.||.+|||++++++.|+.++.
T Consensus       259 ~-------------~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  306 (317)
T 2buj_A          259 A-------------VQNQLS-IPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP  306 (317)
T ss_dssp             H-------------HHCC---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred             H-------------hhccCC-CCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence            1             111000 01112234568899999999999999999999999998753


No 63 
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00  E-value=1.3e-43  Score=341.62  Aligned_cols=243  Identities=22%  Similarity=0.307  Sum_probs=196.5

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++.. .+|+.+|+|++....      ......+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        15 i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~------~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv   88 (444)
T 3soa_A           15 LFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKK------LSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI   88 (444)
T ss_dssp             EEEEEEEC--CEEEEEEETTTTEEEEEEEEESCS------CHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred             EEEEeccCCCeEEEEEEECCCCcEEEEEEEEccc------CCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence            457899999999999986 578999999987522      1233456789999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeC---CCCceEEeccCCcc
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLD---AEFTPRLADFGLAK  256 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~---~~~~~kl~Dfgl~~  256 (380)
                      |||+++|+|.+++..    ...+++..+..++.|++.||+|||   +.+|+||||||+|||++   +++.+||+|||+++
T Consensus        89 ~E~~~gg~L~~~i~~----~~~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~  161 (444)
T 3soa_A           89 FDLVTGGELFEDIVA----REYYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAI  161 (444)
T ss_dssp             ECCCBCCBHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred             EEeCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence            999999999999874    456999999999999999999999   89999999999999998   46789999999997


Q ss_pred             cCCC------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhH
Q 047245          257 LMPG------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEARE  330 (380)
Q Consensus       257 ~~~~------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  330 (380)
                      ....      ...||+.|+|||.+.+..++.++||||+|+++|+|++|..||...        ..............   
T Consensus       162 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~--------~~~~~~~~i~~~~~---  230 (444)
T 3soa_A          162 EVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDE--------DQHRLYQQIKAGAY---  230 (444)
T ss_dssp             CCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCS--------SHHHHHHHHHHTCC---
T ss_pred             EecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCc--------cHHHHHHHHHhCCC---
Confidence            6543      235899999999999999999999999999999999999998531        11222222211110   


Q ss_pred             hhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          331 ALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                        +  .. ..........+.+++.+||+.||.+|||+.|+++
T Consensus       231 --~--~~-~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~  267 (444)
T 3soa_A          231 --D--FP-SPEWDTVTPEAKDLINKMLTINPSKRITAAEALK  267 (444)
T ss_dssp             --C--CC-TTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             --C--CC-ccccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence              0  00 0011123456889999999999999999999985


No 64 
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00  E-value=1.3e-43  Score=336.41  Aligned_cols=244  Identities=23%  Similarity=0.308  Sum_probs=192.3

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcC-CCCCcceeeEEEecCCeEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASL-RHRNLMSLRAYVPESSRFYL  178 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l  178 (380)
                      ..++||+|+||.||++... +++.||+|++.......     ....+.+.+|..++.++ +||||+++++++.+.+..++
T Consensus        56 ~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~-----~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  130 (396)
T 4dc2_A           56 LLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVND-----DEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF  130 (396)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC---------CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccC-----HHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence            4578999999999999974 57899999997633221     12235677899999887 89999999999999999999


Q ss_pred             EEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccC
Q 047245          179 VYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLM  258 (380)
Q Consensus       179 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~  258 (380)
                      ||||+++|+|.+++..    ...+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||+++..
T Consensus       131 V~E~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~~~  203 (396)
T 4dc2_A          131 VIEYVNGGDLMFHMQR----QRKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG  203 (396)
T ss_dssp             EEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred             EEEcCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceeeec
Confidence            9999999999999874    346999999999999999999999   899999999999999999999999999999853


Q ss_pred             C------CCCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhh
Q 047245          259 P------GSLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREAL  332 (380)
Q Consensus       259 ~------~~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  332 (380)
                      .      ....||+.|+|||.+.+..++.++||||||+++|||++|+.||...............+.........     
T Consensus       204 ~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~-----  278 (396)
T 4dc2_A          204 LRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ-----  278 (396)
T ss_dssp             CCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCC-----
T ss_pred             ccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccc-----
Confidence            2      23458999999999999999999999999999999999999996321111111111111111111111     


Q ss_pred             chhccCCcccHHHHHHHHHHHHHcccCCCCCCCCH
Q 047245          333 DRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSS  367 (380)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~  367 (380)
                            ...+......+.+++.+||+.||.+||++
T Consensus       279 ------~~~p~~~s~~~~~li~~lL~~dP~~R~~~  307 (396)
T 4dc2_A          279 ------IRIPRSLSVKAASVLKSFLNKDPKERLGC  307 (396)
T ss_dssp             ------CCCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred             ------cCCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence                  11122344568899999999999999996


No 65 
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00  E-value=4e-44  Score=331.94  Aligned_cols=250  Identities=23%  Similarity=0.314  Sum_probs=190.6

Q ss_pred             cccccCccCCeeEEEEEecCC----cEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeE
Q 047245          101 ENRLLGSSPDGKYYRTVLDNG----LTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRF  176 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~~g----~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  176 (380)
                      ..+.||+|+||.||++.....    ..||+|++.....      .....+.+.+|+.++++++||||+++++++......
T Consensus        27 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  100 (323)
T 3qup_A           27 LGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADII------ASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK  100 (323)
T ss_dssp             EEEEEEEETTEEEEEEEC-------CEEEEEEC------------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred             EeceecccCCeEEEEEEEcccCCcceeEEEEEeccccc------CHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence            557899999999999987433    2799999865221      223357899999999999999999999999877655


Q ss_pred             ------EEEEeecCCCCHHHHHHHhhh--cccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceE
Q 047245          177 ------YLVYDYLQTGSLEDAMDRIRE--NQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPR  248 (380)
Q Consensus       177 ------~lv~e~~~~gsL~~~l~~~~~--~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~k  248 (380)
                            ++|+||+++|+|.+++.....  ....+++..++.++.|++.||+|||   +.+++||||||+||++++++.+|
T Consensus       101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~~~~k  177 (323)
T 3qup_A          101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVC  177 (323)
T ss_dssp             ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEE
T ss_pred             cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCCCCEE
Confidence                  999999999999999975332  2236899999999999999999999   88999999999999999999999


Q ss_pred             EeccCCcccCCCC--------CcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhccCCCCHHHHH
Q 047245          249 LADFGLAKLMPGS--------LIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEAASGGSLGRWL  319 (380)
Q Consensus       249 l~Dfgl~~~~~~~--------~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~l~~~~  319 (380)
                      |+|||+++.....        ..+++.|+|||.+.+..++.++||||||+++|||++ |..||.....        ....
T Consensus       178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~--------~~~~  249 (323)
T 3qup_A          178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN--------AEIY  249 (323)
T ss_dssp             ECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG--------GGHH
T ss_pred             EeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccCh--------HHHH
Confidence            9999999765321        236778999999999999999999999999999999 8999863110        1111


Q ss_pred             HHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          320 RHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                      .......           ....+......+.+++.+||+.||++|||+.++++.|+++.
T Consensus       250 ~~~~~~~-----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l  297 (323)
T 3qup_A          250 NYLIGGN-----------RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENIL  297 (323)
T ss_dssp             HHHHTTC-----------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHhcCC-----------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            1111111           01112234456889999999999999999999999998863


No 66 
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00  E-value=1.1e-43  Score=327.51  Aligned_cols=254  Identities=22%  Similarity=0.363  Sum_probs=194.1

Q ss_pred             cccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLVY  180 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  180 (380)
                      ..+.||+|+||.||++...+|+.||+|++....      ........+.+|+.++++++||||+++++++.+.+..++||
T Consensus        25 ~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   98 (311)
T 3niz_A           25 KLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDA------EDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF   98 (311)
T ss_dssp             EEEEEEECSSCEEEEEEETTSCEEEEEEEC------------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred             hhhhccCCCCeEEEEEEECCCCEEEEEEEeccc------ccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence            346899999999999999889999999996522      12233467889999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCCC
Q 047245          181 DYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMPG  260 (380)
Q Consensus       181 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~  260 (380)
                      ||+++ +|.+++..   ....+++..+..++.|++.||+|||   +.+++||||||+|||++.++.+||+|||+++....
T Consensus        99 e~~~~-~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~  171 (311)
T 3niz_A           99 EFMEK-DLKKVLDE---NKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGI  171 (311)
T ss_dssp             ECCSE-EHHHHHHT---CTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEETTS
T ss_pred             cCCCC-CHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceecCC
Confidence            99985 88888763   3446899999999999999999999   89999999999999999999999999999976542


Q ss_pred             ------CCcCCCcccCcccccC-CCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhH---
Q 047245          261 ------SLIATSAYSAPECFQN-RSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEARE---  330 (380)
Q Consensus       261 ------~~~~~~~y~aPE~~~~-~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~---  330 (380)
                            ...+|+.|+|||.+.+ ..++.++||||||+++|||++|+.||...    .....+..... .........   
T Consensus       172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~----~~~~~~~~i~~-~~~~~~~~~~~~  246 (311)
T 3niz_A          172 PVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGV----TDDDQLPKIFS-ILGTPNPREWPQ  246 (311)
T ss_dssp             CCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS----STTTHHHHHHH-HHCCCCTTTSGG
T ss_pred             CcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCC----ChHHHHHHHHH-HHCCCChHHhhh
Confidence                  2358999999999876 56899999999999999999999998632    11111111111 111100000   


Q ss_pred             ------hhchhc---cCCc---ccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          331 ------ALDRSI---LGEE---VEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       331 ------~~~~~~---~~~~---~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                            ..+...   ....   ........+.+++.+||+.||++|||++|+++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  300 (311)
T 3niz_A          247 VQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN  300 (311)
T ss_dssp             GTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             hhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence                  000000   0000   00112346789999999999999999999986


No 67 
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00  E-value=1.1e-43  Score=334.17  Aligned_cols=244  Identities=24%  Similarity=0.349  Sum_probs=197.8

Q ss_pred             ccccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEE
Q 047245          100 NENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYL  178 (380)
Q Consensus       100 ~~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  178 (380)
                      ...+.||+|+||.||++.. .+|..||+|++.....      .....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus        32 ~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~------~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l  105 (362)
T 2bdw_A           32 DVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL------SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL  105 (362)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC------CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             EEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccC------CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence            3567899999999999987 4689999999975221      23345778999999999999999999999999999999


Q ss_pred             EEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCC---CceEEeccCCc
Q 047245          179 VYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAE---FTPRLADFGLA  255 (380)
Q Consensus       179 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~---~~~kl~Dfgl~  255 (380)
                      ||||+++|+|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+|||++.+   +.+||+|||++
T Consensus       106 v~e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a  178 (362)
T 2bdw_A          106 VFDLVTGGELFEDIVA----REFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA  178 (362)
T ss_dssp             EECCCCSCBHHHHHTT----CSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred             EEecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCcc
Confidence            9999999999998863    446899999999999999999999   8899999999999999865   45999999999


Q ss_pred             ccCCC-----CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhH
Q 047245          256 KLMPG-----SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEARE  330 (380)
Q Consensus       256 ~~~~~-----~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  330 (380)
                      .....     ...||+.|+|||.+.+..++.++||||||+++|||++|..||...        ..............   
T Consensus       179 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~--------~~~~~~~~i~~~~~---  247 (362)
T 2bdw_A          179 IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE--------DQHRLYAQIKAGAY---  247 (362)
T ss_dssp             BCCTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHTCC---
T ss_pred             eEecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCC--------CHHHHHHHHHhCCC---
Confidence            86653     245899999999999999999999999999999999999998631        11122222211110   


Q ss_pred             hhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          331 ALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                        +  . ...........+.+++.+||+.||++|||+.|+++
T Consensus       248 --~--~-~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  284 (362)
T 2bdw_A          248 --D--Y-PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK  284 (362)
T ss_dssp             --C--C-CTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             --C--C-CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence              0  0 00111223456889999999999999999999874


No 68 
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00  E-value=3.6e-44  Score=325.82  Aligned_cols=244  Identities=20%  Similarity=0.345  Sum_probs=189.9

Q ss_pred             cccccCccCCeeEEEEEec----CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeE
Q 047245          101 ENRLLGSSPDGKYYRTVLD----NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRF  176 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  176 (380)
                      ..+.||+|+||.||+|...    .+..||+|++...       ......+.+.+|+.++++++||||+++++++.+ +..
T Consensus        19 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~-------~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~   90 (281)
T 1mp8_A           19 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC-------TSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPV   90 (281)
T ss_dssp             EEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT-------TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSC
T ss_pred             EEeEeeecCCeeEEEEEEecCCCCceEEEEEecccc-------CCHHHHHHHHHHHHHHHhCCCCccceEEEEEcc-Ccc
Confidence            4578999999999999874    2457999988641       123455789999999999999999999999854 568


Q ss_pred             EEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcc
Q 047245          177 YLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAK  256 (380)
Q Consensus       177 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~  256 (380)
                      ++||||+++|+|.+++..   ....+++..++.++.|++.||+|||   +.+++||||||+||+++.++.+||+|||+++
T Consensus        91 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~  164 (281)
T 1mp8_A           91 WIIMELCTLGELRSFLQV---RKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSR  164 (281)
T ss_dssp             EEEEECCTTEEHHHHHHH---TTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC-----
T ss_pred             EEEEecCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECcccccc
Confidence            999999999999999974   2346899999999999999999999   8999999999999999999999999999998


Q ss_pred             cCCCC-------CcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhccCCCCHHHHHHHHHhhcch
Q 047245          257 LMPGS-------LIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEAASGGSLGRWLRHLQHAGEA  328 (380)
Q Consensus       257 ~~~~~-------~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~  328 (380)
                      .....       ..+++.|+|||.+.+..++.++||||||+++|||++ |..||.....        .+.......... 
T Consensus       165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~--------~~~~~~i~~~~~-  235 (281)
T 1mp8_A          165 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN--------NDVIGRIENGER-  235 (281)
T ss_dssp             --------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG--------GGHHHHHHTTCC-
T ss_pred             ccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCH--------HHHHHHHHcCCC-
Confidence            65432       236778999999998899999999999999999997 9999863211        011111111100 


Q ss_pred             hHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhcc
Q 047245          329 REALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQL  377 (380)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l  377 (380)
                                ...+......+.+++.+||+.||++|||+.|+++.|+++
T Consensus       236 ----------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~  274 (281)
T 1mp8_A          236 ----------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI  274 (281)
T ss_dssp             ----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ----------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence                      111223445688999999999999999999999999876


No 69 
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00  E-value=1.7e-43  Score=327.26  Aligned_cols=260  Identities=21%  Similarity=0.308  Sum_probs=202.3

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCC--eEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESS--RFY  177 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~  177 (380)
                      ..+.||+|+||.||++... +|+.||+|++.....       ....+.+.+|++++++++||||+++++++....  ..+
T Consensus        13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   85 (319)
T 4euu_A           13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-------LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV   85 (319)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-------GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred             EEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc-------cchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEE
Confidence            4578999999999999975 589999999975221       112366789999999999999999999987655  789


Q ss_pred             EEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEe----CCCCceEEeccC
Q 047245          178 LVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVML----DAEFTPRLADFG  253 (380)
Q Consensus       178 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill----~~~~~~kl~Dfg  253 (380)
                      +||||+++|+|.+++.... ....+++..++.++.|++.||+|||   +.+++||||||+|||+    +.++.+||+|||
T Consensus        86 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg  161 (319)
T 4euu_A           86 LIMEFCPCGSLYTVLEEPS-NAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG  161 (319)
T ss_dssp             EEEECCTTCBHHHHHHSGG-GTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCT
T ss_pred             EEEeCCCCCCHHHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCC
Confidence            9999999999999997532 2334999999999999999999999   8999999999999999    788889999999


Q ss_pred             CcccCCCC-----CcCCCcccCccccc--------CCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHH
Q 047245          254 LAKLMPGS-----LIATSAYSAPECFQ--------NRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLR  320 (380)
Q Consensus       254 l~~~~~~~-----~~~~~~y~aPE~~~--------~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~  320 (380)
                      +++.....     ..+|+.|+|||.+.        +..++.++||||||+++|||++|..||.......    .......
T Consensus       162 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~----~~~~~~~  237 (319)
T 4euu_A          162 AARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR----RNKEVMY  237 (319)
T ss_dssp             TCEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGG----GCHHHHH
T ss_pred             CceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccc----hhHHHHH
Confidence            99865432     35899999999986        5778999999999999999999999986421111    1122222


Q ss_pred             HHHhhcchhHhh-------------chhc-cCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhc
Q 047245          321 HLQHAGEAREAL-------------DRSI-LGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQ  376 (380)
Q Consensus       321 ~~~~~~~~~~~~-------------~~~~-~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~  376 (380)
                      ....... ...+             ...+ ............+.+++.+||+.||++|||++|+++-..+
T Consensus       238 ~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d  306 (319)
T 4euu_A          238 KIITGKP-SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD  306 (319)
T ss_dssp             HHHHHCC-TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHH
T ss_pred             HHhcCCC-cccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHH
Confidence            2222111 0000             0000 1113346677889999999999999999999999987654


No 70 
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00  E-value=9.1e-44  Score=327.43  Aligned_cols=248  Identities=25%  Similarity=0.392  Sum_probs=192.6

Q ss_pred             cccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLVY  180 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  180 (380)
                      ..+.||+|+||.||++... ++.||+|.+..          ....+.+.+|+.++++++||||+++++++.+  ..++||
T Consensus        12 ~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~----------~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~   78 (307)
T 2eva_A           12 VEEVVGRGAFGVVCKAKWR-AKDVAIKQIES----------ESERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVM   78 (307)
T ss_dssp             EEEEEECCSSSEEEEEEET-TEEEEEEECSS----------TTHHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEE
T ss_pred             eeeEeecCCCceEEEEEEC-CeeEEEEEecC----------hhHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEE
Confidence            4578999999999999985 78999999853          1124678999999999999999999998874  479999


Q ss_pred             eecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCc-eEEeccCCcccCC
Q 047245          181 DYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFT-PRLADFGLAKLMP  259 (380)
Q Consensus       181 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~-~kl~Dfgl~~~~~  259 (380)
                      ||+++|+|.+++.... ....+++..++.++.|+++||+|||+....+++||||||+||+++.++. +||+|||++....
T Consensus        79 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~  157 (307)
T 2eva_A           79 EYAEGGSLYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ  157 (307)
T ss_dssp             ECCTTCBHHHHHHCSS-SEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-----
T ss_pred             EcCCCCCHHHHHhccC-CCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccc
Confidence            9999999999997421 2235789999999999999999999332289999999999999988876 7999999997654


Q ss_pred             C---CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhhchhc
Q 047245          260 G---SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREALDRSI  336 (380)
Q Consensus       260 ~---~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  336 (380)
                      .   ...|++.|+|||.+.+..++.++||||||+++|||++|+.||....      ..............      .   
T Consensus       158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~------~~~~~~~~~~~~~~------~---  222 (307)
T 2eva_A          158 THMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIG------GPAFRIMWAVHNGT------R---  222 (307)
T ss_dssp             -------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTC------SSHHHHHHHHHTTC------C---
T ss_pred             cccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhC------ccHHHHHHHHhcCC------C---
Confidence            3   3458999999999999999999999999999999999999986311      11111111111110      0   


Q ss_pred             cCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhcccC
Q 047245          337 LGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLHS  379 (380)
Q Consensus       337 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~~  379 (380)
                        ..........+.+++.+||+.||++|||++|+++.|+.+..
T Consensus       223 --~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  263 (307)
T 2eva_A          223 --PPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR  263 (307)
T ss_dssp             --CCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred             --CCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence              11112234567899999999999999999999999998753


No 71 
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00  E-value=1.6e-43  Score=333.51  Aligned_cols=260  Identities=14%  Similarity=0.146  Sum_probs=197.2

Q ss_pred             cccccCccCCeeEEEEEecC------CcEEEEEEeeeccCCChhhh----cHHHHHHHHHHHHHHHcCCCCCcceeeEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLDN------GLTVAVRRVEAFESGSPEKQ----NKSVKRRIQQELEVLASLRHRNLMSLRAYV  170 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~~------g~~vavK~~~~~~~~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~  170 (380)
                      ..+.||+|+||.||+|...+      +..||+|++...... ...+    .......+..|+..+..++||||+++++++
T Consensus        39 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~  117 (364)
T 3op5_A           39 VGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGP-LFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSG  117 (364)
T ss_dssp             EEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHH-HHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEE
T ss_pred             EEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchh-HHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeee
Confidence            45789999999999998754      478999998652110 0000    000112344577788889999999999998


Q ss_pred             ecC----CeEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeC--CC
Q 047245          171 PES----SRFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLD--AE  244 (380)
Q Consensus       171 ~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~--~~  244 (380)
                      ...    ...++||||+ +++|.+++..   ....+++..++.++.|++.||+|||   +.+++||||||+|||++  .+
T Consensus       118 ~~~~~~~~~~~lv~e~~-g~~L~~~~~~---~~~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~Nill~~~~~  190 (364)
T 3op5_A          118 LHDKNGKSYRFMIMDRF-GSDLQKIYEA---NAKRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASNLLLNYKNP  190 (364)
T ss_dssp             EEEETTEEEEEEEEECE-EEEHHHHHHH---TTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEESSCT
T ss_pred             eeccCCcceEEEEEeCC-CCCHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHHEEEecCCC
Confidence            664    4589999999 9999999974   2457999999999999999999999   88999999999999999  88


Q ss_pred             CceEEeccCCcccCCC-------------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccC
Q 047245          245 FTPRLADFGLAKLMPG-------------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAAS  311 (380)
Q Consensus       245 ~~~kl~Dfgl~~~~~~-------------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~  311 (380)
                      +.+||+|||+++....             ...||+.|+|||.+.+..++.++||||||+++|||++|+.||....    .
T Consensus       191 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~----~  266 (364)
T 3op5_A          191 DQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNL----K  266 (364)
T ss_dssp             TCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT----T
T ss_pred             CeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccc----c
Confidence            9999999999965431             1238999999999999999999999999999999999999986311    1


Q ss_pred             CCCHHHHHHHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhcc
Q 047245          312 GGSLGRWLRHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQL  377 (380)
Q Consensus       312 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l  377 (380)
                      ......+.... ....+.+.+++.+....    .+..+.+++..||+.||.+||+++++++.|+++
T Consensus       267 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~  327 (364)
T 3op5_A          267 DPKYVRDSKIR-YRENIASLMDKCFPAAN----APGEIAKYMETVKLLDYTEKPLYENLRDILLQG  327 (364)
T ss_dssp             CHHHHHHHHHH-HHHCHHHHHHHHSCTTC----CCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred             CHHHHHHHHHH-hhhhHHHHHHHhccccc----CHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence            11111111111 11233444444332222    234578999999999999999999999999875


No 72 
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00  E-value=1.7e-44  Score=334.00  Aligned_cols=259  Identities=26%  Similarity=0.388  Sum_probs=202.3

Q ss_pred             cccccCccCCeeEEEEEe-----cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEec--C
Q 047245          101 ENRLLGSSPDGKYYRTVL-----DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPE--S  173 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~  173 (380)
                      ..+.||+|+||.||++.+     .+|+.||+|++...       ......+.+.+|+.++++++||||+++++++.+  .
T Consensus        35 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  107 (318)
T 3lxp_A           35 KIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD-------AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGA  107 (318)
T ss_dssp             EEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT-------CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTT
T ss_pred             hhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc-------cChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCC
Confidence            457899999999999865     36889999999752       123445789999999999999999999999987  4


Q ss_pred             CeEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccC
Q 047245          174 SRFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFG  253 (380)
Q Consensus       174 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfg  253 (380)
                      ...++||||+++|+|.+++..     ..+++..++.++.|++.||+|||   +.+++||||||+||+++.++.+||+|||
T Consensus       108 ~~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg  179 (318)
T 3lxp_A          108 ASLQLVMEYVPLGSLRDYLPR-----HSIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFG  179 (318)
T ss_dssp             TEEEEEECCCTTCBHHHHGGG-----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGG
T ss_pred             ceEEEEEecccCCcHHHHHhh-----CCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCcc
Confidence            678999999999999999863     35899999999999999999999   8999999999999999999999999999


Q ss_pred             CcccCCCC---------CcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHh
Q 047245          254 LAKLMPGS---------LIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQH  324 (380)
Q Consensus       254 l~~~~~~~---------~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~  324 (380)
                      ++......         ..++..|+|||.+.+..++.++||||||+++|||++|..||.........   ...+......
T Consensus       180 ~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~---~~~~~~~~~~  256 (318)
T 3lxp_A          180 LAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLE---LIGIAQGQMT  256 (318)
T ss_dssp             GCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHH---HHCSCCHHHH
T ss_pred             ccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhh---hhcccccchh
Confidence            99865432         24677899999999989999999999999999999999998642111000   0000000000


Q ss_pred             hcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          325 AGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                      .....+.+..... ...+......+.+++.+||+.||++|||++|+++.|+++.
T Consensus       257 ~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~  309 (318)
T 3lxp_A          257 VLRLTELLERGER-LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVH  309 (318)
T ss_dssp             HHHHHHHHHTTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcccC-CCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence            1111222222211 1122334567889999999999999999999999999874


No 73 
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00  E-value=2.5e-44  Score=335.15  Aligned_cols=253  Identities=20%  Similarity=0.283  Sum_probs=188.2

Q ss_pred             cccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHH--HHHHHHHcCCCCCcceeeEEEec-----C
Q 047245          101 ENRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQ--QELEVLASLRHRNLMSLRAYVPE-----S  173 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~--~E~~~l~~l~h~niv~l~~~~~~-----~  173 (380)
                      ..+.||+|+||.||+|.. +++.||||++....           ...+.  .|+..+..++||||+++++.+..     .
T Consensus        17 ~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~-----------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~   84 (336)
T 3g2f_A           17 LLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN-----------RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGR   84 (336)
T ss_dssp             EEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG-----------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSC
T ss_pred             eeeecccCCCeEEEEEEE-CCeEEEEEEeeccc-----------hhhHHHHHHHHHHHhccCcchhhheecccccccCCC
Confidence            457899999999999987 68999999986411           12333  34444556899999999986532     2


Q ss_pred             CeEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCC---------CeEecCCCCCcEEeCCC
Q 047245          174 SRFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNP---------QILHYNLKPTNVMLDAE  244 (380)
Q Consensus       174 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~---------~iiH~dlk~~Nill~~~  244 (380)
                      ...++||||+++|+|.+++..     ...++..++.++.|++.||+|||   +.         +++||||||+|||++.+
T Consensus        85 ~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~  156 (336)
T 3g2f_A           85 MEYLLVMEYYPNGSLXKYLSL-----HTSDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKND  156 (336)
T ss_dssp             EEEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTT
T ss_pred             ceEEEEEecCCCCcHHHHHhh-----cccchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCC
Confidence            367899999999999999973     34589999999999999999999   77         99999999999999999


Q ss_pred             CceEEeccCCcccCCC--------------CCcCCCcccCcccccC-------CCCCCcchhhHHHHHHHHHHhCCCCCC
Q 047245          245 FTPRLADFGLAKLMPG--------------SLIATSAYSAPECFQN-------RSYTDKSDIFSFGMILAVLLTGRDPTA  303 (380)
Q Consensus       245 ~~~kl~Dfgl~~~~~~--------------~~~~~~~y~aPE~~~~-------~~~~~~sDv~s~Gvil~el~tg~~p~~  303 (380)
                      +.+||+|||+++....              ...||+.|+|||.+.+       ..++.++||||||+++|||++|..|+.
T Consensus       157 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~  236 (336)
T 3g2f_A          157 GTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLF  236 (336)
T ss_dssp             SCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGS
T ss_pred             CcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCC
Confidence            9999999999975532              2348999999999976       456778999999999999999987765


Q ss_pred             chhhhccCC----------CCHHHHHHHHHhhcchhHhhchhccCC-cccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          304 PFFAEAASG----------GSLGRWLRHLQHAGEAREALDRSILGE-EVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       304 ~~~~~~~~~----------~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      +........          .....+... ......    .+.+... .........+.+++.+||+.||++|||++|+++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~  311 (336)
T 3g2f_A          237 PGESVPEYQMAFQTEVGNHPTFEDMQVL-VSREKQ----RPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEE  311 (336)
T ss_dssp             TTSCCCCCCCTTHHHHCSSCCHHHHHHH-HTTSCC----CCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             CccchhHHHHhhhcccCCCchHHHHHhh-hccccc----CCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHH
Confidence            321111100          111111111 111100    0111000 111235667999999999999999999999999


Q ss_pred             HHhccc
Q 047245          373 MLTQLH  378 (380)
Q Consensus       373 ~L~~l~  378 (380)
                      .|+++.
T Consensus       312 ~L~~ll  317 (336)
T 3g2f_A          312 RMAELM  317 (336)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999873


No 74 
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00  E-value=1.7e-44  Score=329.10  Aligned_cols=244  Identities=20%  Similarity=0.308  Sum_probs=195.2

Q ss_pred             cccccCccCCeeEEEEEecC-C-------cEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEec
Q 047245          101 ENRLLGSSPDGKYYRTVLDN-G-------LTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPE  172 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~~-g-------~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  172 (380)
                      ..+.||+|+||.||++.... +       ..||+|++...        .....+.+.+|+.++++++||||+++++++.+
T Consensus        12 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~--------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   83 (289)
T 4fvq_A           12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA--------HRNYSESFFEAASMMSKLSHKHLVLNYGVCVC   83 (289)
T ss_dssp             EEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG--------GGGGHHHHHHHHHHHHTSCCTTBCCEEEEECC
T ss_pred             eeeeeccCCCceEEEEEEecccccccccchhhhhhhcccc--------cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEe
Confidence            45789999999999998642 3       47999998642        22234678999999999999999999999999


Q ss_pred             CCeEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCc------
Q 047245          173 SSRFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFT------  246 (380)
Q Consensus       173 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~------  246 (380)
                      .+..++||||+++|+|.+++..   ....+++..++.++.|++.||+|||   +.+++||||||+|||++.++.      
T Consensus        84 ~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~  157 (289)
T 4fvq_A           84 GDENILVQEFVKFGSLDTYLKK---NKNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNP  157 (289)
T ss_dssp             TTCCEEEEECCTTCBHHHHHHH---TGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBC
T ss_pred             CCCCEEEEECCCCCCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCccccccc
Confidence            9999999999999999999974   2334899999999999999999999   899999999999999998877      


Q ss_pred             --eEEeccCCcccCCCC--CcCCCcccCcccccC-CCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHH
Q 047245          247 --PRLADFGLAKLMPGS--LIATSAYSAPECFQN-RSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRH  321 (380)
Q Consensus       247 --~kl~Dfgl~~~~~~~--~~~~~~y~aPE~~~~-~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~  321 (380)
                        +||+|||++......  ..+++.|+|||.+.+ ..++.++||||||+++|||++|..|+...       .........
T Consensus       158 ~~~kl~Dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~-------~~~~~~~~~  230 (289)
T 4fvq_A          158 PFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSA-------LDSQRKLQF  230 (289)
T ss_dssp             CEEEECCCCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTT-------SCHHHHHHH
T ss_pred             ceeeeccCcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccc-------cchHHHHHH
Confidence              999999999765442  247889999999987 77899999999999999999965554321       011111111


Q ss_pred             HHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          322 LQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                      .....        .     .+......+.+++.+||+.||++|||++|+++.|+++-
T Consensus       231 ~~~~~--------~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~  274 (289)
T 4fvq_A          231 YEDRH--------Q-----LPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLF  274 (289)
T ss_dssp             HHTTC--------C-----CCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC
T ss_pred             hhccC--------C-----CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            11100        0     01112334778999999999999999999999999874


No 75 
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00  E-value=4.1e-44  Score=330.14  Aligned_cols=250  Identities=24%  Similarity=0.390  Sum_probs=201.4

Q ss_pred             ccccccCccCCeeEEEEEe------cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcC-CCCCcceeeEEEec
Q 047245          100 NENRLLGSSPDGKYYRTVL------DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASL-RHRNLMSLRAYVPE  172 (380)
Q Consensus       100 ~~~~~lg~G~~g~vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~  172 (380)
                      ...+.||+|+||.||++..      .++..||+|++...       ......+.+.+|+.+++++ +||||+++++++.+
T Consensus        26 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~-------~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~   98 (313)
T 1t46_A           26 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS-------AHLTEREALMSELKVLSYLGNHMNIVNLLGACTI   98 (313)
T ss_dssp             EEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT-------CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             hHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcc-------hhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEec
Confidence            3567899999999999985      35789999999642       1223457889999999999 99999999999999


Q ss_pred             CCeEEEEEeecCCCCHHHHHHHhhh--------------cccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCc
Q 047245          173 SSRFYLVYDYLQTGSLEDAMDRIRE--------------NQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTN  238 (380)
Q Consensus       173 ~~~~~lv~e~~~~gsL~~~l~~~~~--------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~N  238 (380)
                      .+..++||||+++|+|.+++.....              ....+++..++.++.|++.||+|||   +.+++||||||+|
T Consensus        99 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~N  175 (313)
T 1t46_A           99 GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARN  175 (313)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGG
T ss_pred             CCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccce
Confidence            9999999999999999999985321              1225899999999999999999999   8899999999999


Q ss_pred             EEeCCCCceEEeccCCcccCCCC--------CcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhc
Q 047245          239 VMLDAEFTPRLADFGLAKLMPGS--------LIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEA  309 (380)
Q Consensus       239 ill~~~~~~kl~Dfgl~~~~~~~--------~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~  309 (380)
                      |+++.++.+||+|||+++.....        ..+++.|+|||.+.+..++.++||||||+++|||++ |..||....   
T Consensus       176 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~---  252 (313)
T 1t46_A          176 ILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP---  252 (313)
T ss_dssp             EEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC---
T ss_pred             EEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCccc---
Confidence            99999999999999999865432        235678999999999999999999999999999999 999985310   


Q ss_pred             cCCCCHHHHHHHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhcc
Q 047245          310 ASGGSLGRWLRHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQL  377 (380)
Q Consensus       310 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l  377 (380)
                       .   ....... ...+     ..     ...+......+.+++.+||+.||.+|||+.|+++.|+++
T Consensus       253 -~---~~~~~~~-~~~~-----~~-----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~  305 (313)
T 1t46_A          253 -V---DSKFYKM-IKEG-----FR-----MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ  305 (313)
T ss_dssp             -S---SHHHHHH-HHHT-----CC-----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -c---hhHHHHH-hccC-----CC-----CCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence             0   0111111 1111     00     111122345688999999999999999999999999875


No 76 
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00  E-value=3e-43  Score=332.41  Aligned_cols=241  Identities=23%  Similarity=0.295  Sum_probs=192.1

Q ss_pred             ccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEEE
Q 047245          102 NRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLVY  180 (380)
Q Consensus       102 ~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  180 (380)
                      .+.||+|+||.||++.. .+|..||+|++...        .....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus        94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~--------~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~  165 (373)
T 2x4f_A           94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTR--------GMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVM  165 (373)
T ss_dssp             EEECC-----CEEEEEETTTCCEEEEEEEECC--------SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ceEEecCcCEEEEEEEEcCCCcEEEEEEEccc--------ccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence            45799999999999986 56899999999751        1233477899999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEe--CCCCceEEeccCCcccC
Q 047245          181 DYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVML--DAEFTPRLADFGLAKLM  258 (380)
Q Consensus       181 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill--~~~~~~kl~Dfgl~~~~  258 (380)
                      ||+++|+|.+++..   ....+++..+..++.|++.||+|||   +.+++||||||+|||+  ++++.+||+|||+++..
T Consensus       166 E~~~~~~L~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~  239 (373)
T 2x4f_A          166 EYVDGGELFDRIID---ESYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRY  239 (373)
T ss_dssp             ECCTTCEEHHHHHH---TGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEEC
T ss_pred             eCCCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceec
Confidence            99999999998864   2346899999999999999999999   8999999999999999  66789999999999865


Q ss_pred             CC-----CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhhc
Q 047245          259 PG-----SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREALD  333 (380)
Q Consensus       259 ~~-----~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  333 (380)
                      ..     ...||+.|+|||.+.+..++.++||||||+++|||++|..||...        ...+...........     
T Consensus       240 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~--------~~~~~~~~i~~~~~~-----  306 (373)
T 2x4f_A          240 KPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGD--------NDAETLNNILACRWD-----  306 (373)
T ss_dssp             CTTCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCS--------SHHHHHHHHHHTCCC-----
T ss_pred             CCccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC--------CHHHHHHHHHhccCC-----
Confidence            43     235899999999999999999999999999999999999998631        111222222211100     


Q ss_pred             hhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          334 RSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                        . ...........+.+++.+||+.||.+|||++|+++
T Consensus       307 --~-~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~  342 (373)
T 2x4f_A          307 --L-EDEEFQDISEEAKEFISKLLIKEKSWRISASEALK  342 (373)
T ss_dssp             --S-CSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             --C-ChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence              0 00111223456889999999999999999999986


No 77 
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=3.6e-44  Score=323.01  Aligned_cols=244  Identities=21%  Similarity=0.338  Sum_probs=202.0

Q ss_pred             cccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLVY  180 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  180 (380)
                      ..+.||+|+||.||++...++..||+|++.....         ..+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus        12 ~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~---------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   82 (267)
T 3t9t_A           12 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM---------SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVT   82 (267)
T ss_dssp             EEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB---------CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             eeeEecCCCceeEEEEEecCCCeEEEEEccccCC---------CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEE
Confidence            4568999999999999998889999999975221         1257889999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCCC
Q 047245          181 DYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMPG  260 (380)
Q Consensus       181 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~  260 (380)
                      ||+++++|.+++..   ....+++..++.++.|++.||+|||   +.+++||||||+||+++.++.+||+|||++.....
T Consensus        83 e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~  156 (267)
T 3t9t_A           83 EFMEHGCLSDYLRT---QRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD  156 (267)
T ss_dssp             CCCTTCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred             eCCCCCcHHHHHhh---CcccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEccccccccccc
Confidence            99999999999974   2346899999999999999999999   89999999999999999999999999999976532


Q ss_pred             -------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhh
Q 047245          261 -------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREAL  332 (380)
Q Consensus       261 -------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  332 (380)
                             ...++..|+|||.+.+..++.++||||||+++|||++ |..||...        .............      
T Consensus       157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--------~~~~~~~~i~~~~------  222 (267)
T 3t9t_A          157 DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR--------SNSEVVEDISTGF------  222 (267)
T ss_dssp             HHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--------CHHHHHHHHHTTC------
T ss_pred             ccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCC--------CHHHHHHHHhcCC------
Confidence                   2346778999999998899999999999999999999 89998531        1122222221110      


Q ss_pred             chhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          333 DRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                      .     ...+......+.+++.+||+.||++|||++++++.|+++.
T Consensus       223 ~-----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~  263 (267)
T 3t9t_A          223 R-----LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA  263 (267)
T ss_dssp             C-----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             c-----CCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            0     0111223456789999999999999999999999999874


No 78 
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=4e-43  Score=326.86  Aligned_cols=251  Identities=23%  Similarity=0.334  Sum_probs=193.5

Q ss_pred             ccccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcC--CCCCcceeeEEEecC----
Q 047245          100 NENRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASL--RHRNLMSLRAYVPES----  173 (380)
Q Consensus       100 ~~~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~----  173 (380)
                      ...+.||+|+||.||+|... |+.||||++...         .  ...+..|.+++...  +||||+++++++...    
T Consensus        40 ~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---------~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~  107 (337)
T 3mdy_A           40 QMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---------E--EASWFRETEIYQTVLMRHENILGFIAADIKGTGSW  107 (337)
T ss_dssp             EEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---------G--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGG
T ss_pred             EEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---------c--cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCC
Confidence            35678999999999999985 899999998641         1  13344455555554  899999999999877    


Q ss_pred             CeEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCC--------CeEecCCCCCcEEeCCCC
Q 047245          174 SRFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNP--------QILHYNLKPTNVMLDAEF  245 (380)
Q Consensus       174 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~--------~iiH~dlk~~Nill~~~~  245 (380)
                      ...++||||+++|+|.+++..     ..+++..++.++.|++.||+|||   +.        +++||||||+|||++.++
T Consensus       108 ~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Nill~~~~  179 (337)
T 3mdy_A          108 TQLYLITDYHENGSLYDYLKS-----TTLDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNILVKKNG  179 (337)
T ss_dssp             CEEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGEEECTTS
T ss_pred             CceEEEEeccCCCcHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccchHHEEECCCC
Confidence            789999999999999999963     36899999999999999999999   66        999999999999999999


Q ss_pred             ceEEeccCCcccCCC----------CCcCCCcccCcccccCCCCCCc------chhhHHHHHHHHHHhC----------C
Q 047245          246 TPRLADFGLAKLMPG----------SLIATSAYSAPECFQNRSYTDK------SDIFSFGMILAVLLTG----------R  299 (380)
Q Consensus       246 ~~kl~Dfgl~~~~~~----------~~~~~~~y~aPE~~~~~~~~~~------sDv~s~Gvil~el~tg----------~  299 (380)
                      .+||+|||+++....          ...||+.|+|||.+.+...+.+      +||||||+++|||++|          .
T Consensus       180 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~  259 (337)
T 3mdy_A          180 TCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQ  259 (337)
T ss_dssp             CEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred             CEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccccc
Confidence            999999999965432          2358999999999987766665      9999999999999999          5


Q ss_pred             CCCCchhhhccCCCCHHHHHHHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          300 DPTAPFFAEAASGGSLGRWLRHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       300 ~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                      .||...   .........+... .....    ..+.........+....+.+++.+||+.||++|||+.|+++.|+++.
T Consensus       260 ~p~~~~---~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~  330 (337)
T 3mdy_A          260 LPYHDL---VPSDPSYEDMREI-VCIKK----LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMS  330 (337)
T ss_dssp             CTTTTT---SCSSCCHHHHHHH-HTTSC----CCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ccHhhh---cCCCCchhhhHHH-Hhhhc----cCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHH
Confidence            555421   1111112222111 11111    11111111122367788999999999999999999999999999874


No 79 
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00  E-value=2.9e-43  Score=326.83  Aligned_cols=248  Identities=22%  Similarity=0.337  Sum_probs=198.5

Q ss_pred             ccccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEE
Q 047245          100 NENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYL  178 (380)
Q Consensus       100 ~~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  178 (380)
                      ...+.||+|+||.||++... +|..||+|.+.........  .....+.+.+|+.++++++||||+++++++.+....++
T Consensus        14 ~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l   91 (326)
T 2y0a_A           14 DTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSR--RGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVIL   91 (326)
T ss_dssp             EEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCS--SSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             EeceEEeeCCCeEEEEEEECCCCcEEEEEEEEcccccccc--chhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            35678999999999999974 6899999999764322111  11124678899999999999999999999999999999


Q ss_pred             EEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCC----ceEEeccCC
Q 047245          179 VYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEF----TPRLADFGL  254 (380)
Q Consensus       179 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~----~~kl~Dfgl  254 (380)
                      ||||+++|+|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+||+++.++    .+||+|||+
T Consensus        92 v~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~  164 (326)
T 2y0a_A           92 ILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL  164 (326)
T ss_dssp             EEECCCSCBHHHHHTT----SSCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECCCTT
T ss_pred             EEEcCCCCCHHHHHHh----cCCcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEECCC
Confidence            9999999999999863    456899999999999999999999   89999999999999999887    899999999


Q ss_pred             cccCCC-----CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchh
Q 047245          255 AKLMPG-----SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAR  329 (380)
Q Consensus       255 ~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~  329 (380)
                      ++....     ...||+.|+|||.+.+..++.++||||||+++|||++|..||...        ..............  
T Consensus       165 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~--------~~~~~~~~~~~~~~--  234 (326)
T 2y0a_A          165 AHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD--------TKQETLANVSAVNY--  234 (326)
T ss_dssp             CEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS--------SHHHHHHHHHHTCC--
T ss_pred             CeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCC--------CHHHHHHHHHhcCC--
Confidence            976542     345899999999999999999999999999999999999998531        11111111111100  


Q ss_pred             HhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          330 EALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                       ....     .........+.+++.+||+.||++|||++|+++
T Consensus       235 -~~~~-----~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  271 (326)
T 2y0a_A          235 -EFED-----EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  271 (326)
T ss_dssp             -CCCH-----HHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             -CcCc-----cccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence             0000     000123455789999999999999999999986


No 80 
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00  E-value=3.4e-43  Score=328.65  Aligned_cols=244  Identities=23%  Similarity=0.307  Sum_probs=193.8

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcC-CCCCcceeeEEEecCCeEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASL-RHRNLMSLRAYVPESSRFYL  178 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l  178 (380)
                      ..+.||+|+||.||++... +|+.||+|++......     .....+.+.+|..++.++ +||||+++++++.+.+..++
T Consensus        13 ~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l   87 (345)
T 3a8x_A           13 LLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVN-----DDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF   87 (345)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSC-----SHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             EEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhc-----chHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence            4578999999999999974 6889999999763221     234456788999999998 89999999999999999999


Q ss_pred             EEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccC
Q 047245          179 VYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLM  258 (380)
Q Consensus       179 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~  258 (380)
                      ||||+++|+|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+|||++.++.+||+|||+++..
T Consensus        88 v~e~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~  160 (345)
T 3a8x_A           88 VIEYVNGGDLMFHMQR----QRKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG  160 (345)
T ss_dssp             EECCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCS
T ss_pred             EEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEeccccccc
Confidence            9999999999999974    346899999999999999999999   899999999999999999999999999999853


Q ss_pred             C------CCCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhh
Q 047245          259 P------GSLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREAL  332 (380)
Q Consensus       259 ~------~~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  332 (380)
                      .      ....||+.|+|||.+.+..++.++||||||+++|||++|+.||.........................     
T Consensus       161 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~-----  235 (345)
T 3a8x_A          161 LRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ-----  235 (345)
T ss_dssp             CCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCC-----
T ss_pred             cCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCC-----
Confidence            2      23458999999999999999999999999999999999999996321111000011111111111110     


Q ss_pred             chhccCCcccHHHHHHHHHHHHHcccCCCCCCCCH
Q 047245          333 DRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSS  367 (380)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~  367 (380)
                            ...+......+.+++.+||+.||++||++
T Consensus       236 ------~~~p~~~s~~~~~li~~lL~~dP~~R~~~  264 (345)
T 3a8x_A          236 ------IRIPRSLSVKAASVLKSFLNKDPKERLGC  264 (345)
T ss_dssp             ------CCCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred             ------CCCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence                  01112334568899999999999999996


No 81 
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.1e-43  Score=330.53  Aligned_cols=244  Identities=20%  Similarity=0.421  Sum_probs=195.1

Q ss_pred             ccccCccCCeeEEEEEecC-----CcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeE
Q 047245          102 NRLLGSSPDGKYYRTVLDN-----GLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRF  176 (380)
Q Consensus       102 ~~~lg~G~~g~vy~~~~~~-----g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  176 (380)
                      .+.||+|+||.||+|....     +..||+|.+...       ........+.+|+.++++++||||+++++++.+.+..
T Consensus        49 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~-------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  121 (333)
T 1mqb_A           49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAG-------YTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPM  121 (333)
T ss_dssp             EEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTT-------CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSE
T ss_pred             ccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCC-------CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCc
Confidence            4789999999999998642     235999998641       1233456789999999999999999999999999999


Q ss_pred             EEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcc
Q 047245          177 YLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAK  256 (380)
Q Consensus       177 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~  256 (380)
                      ++||||+++|+|.+++..   ....+++..++.++.|++.||+|||   +.+++||||||+||+++.++.+||+|||+++
T Consensus       122 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~  195 (333)
T 1mqb_A          122 MIITEYMENGALDKFLRE---KDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSR  195 (333)
T ss_dssp             EEEEECCTTEEHHHHHHH---TTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred             EEEEeCCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcch
Confidence            999999999999999974   2456899999999999999999999   8899999999999999999999999999998


Q ss_pred             cCCCC---------CcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhccCCCCHHHHHHHHHhhc
Q 047245          257 LMPGS---------LIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEAASGGSLGRWLRHLQHAG  326 (380)
Q Consensus       257 ~~~~~---------~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~l~~~~~~~~~~~  326 (380)
                      .....         ..+++.|+|||.+.+..++.++||||||+++|||++ |..||...        ...+.........
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~--------~~~~~~~~~~~~~  267 (333)
T 1mqb_A          196 VLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWEL--------SNHEVMKAINDGF  267 (333)
T ss_dssp             ---------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--------CHHHHHHHHHTTC
T ss_pred             hhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccC--------CHHHHHHHHHCCC
Confidence            65432         125678999999999999999999999999999999 99998531        1111111111110


Q ss_pred             chhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhcc
Q 047245          327 EAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQL  377 (380)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l  377 (380)
                      .           ...+......+.+++.+||+.||++|||+.++++.|+++
T Consensus       268 ~-----------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~  307 (333)
T 1mqb_A          268 R-----------LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL  307 (333)
T ss_dssp             C-----------CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             c-----------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            0           011123445688999999999999999999999999875


No 82 
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00  E-value=3.4e-43  Score=324.95  Aligned_cols=239  Identities=21%  Similarity=0.316  Sum_probs=196.7

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++... +|+.||+|++.....     ......+.+.+|..+++.++||||+++++++.+....++|
T Consensus        10 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv   84 (318)
T 1fot_A           10 ILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIV-----VRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI   84 (318)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred             EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHh-----hhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence            4578999999999999974 689999999975210     0112236678899999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||+++|+|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+|||++.++.+||+|||+++...
T Consensus        85 ~e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~  157 (318)
T 1fot_A           85 MDYIEGGELFSLLRK----SQRFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVP  157 (318)
T ss_dssp             ECCCCSCBHHHHHHH----TSSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECS
T ss_pred             EeCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceecC
Confidence            999999999999974    346899999999999999999999   9999999999999999999999999999998665


Q ss_pred             C---CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhhchhc
Q 047245          260 G---SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREALDRSI  336 (380)
Q Consensus       260 ~---~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  336 (380)
                      .   ...||+.|+|||.+.+..++.++||||||+++|||++|..||...        .............         .
T Consensus       158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~--------~~~~~~~~i~~~~---------~  220 (318)
T 1fot_A          158 DVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDS--------NTMKTYEKILNAE---------L  220 (318)
T ss_dssp             SCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCS--------SHHHHHHHHHHCC---------C
T ss_pred             CccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCC--------CHHHHHHHHHhCC---------C
Confidence            3   346899999999999999999999999999999999999998631        1122222222111         0


Q ss_pred             cCCcccHHHHHHHHHHHHHcccCCCCCCC-----CHHhHH
Q 047245          337 LGEEVEEDEMLMAVRIAVVCLSDSPADRP-----SSDELV  371 (380)
Q Consensus       337 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RP-----s~~evl  371 (380)
                         ..+......+.+++.+|++.||++||     +++|++
T Consensus       221 ---~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~  257 (318)
T 1fot_A          221 ---RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVK  257 (318)
T ss_dssp             ---CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHH
T ss_pred             ---CCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHh
Confidence               11122345678999999999999999     788876


No 83 
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00  E-value=5.9e-44  Score=332.29  Aligned_cols=239  Identities=23%  Similarity=0.372  Sum_probs=193.9

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++.. .+|+.||+|++.....     ........+.+|+.+++.++||||+++++++.+.+..++|
T Consensus        13 i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv   87 (336)
T 3h4j_B           13 IRETLGEGSFGKVKLATHYKTQQKVALKFISRQLL-----KKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV   87 (336)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-----HHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             EEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHc-----cchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            356899999999999996 6789999999864210     0111235788999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||+ +|+|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+|||+++++.+||+|||++....
T Consensus        88 ~E~~-~g~l~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~  159 (336)
T 3h4j_B           88 IEYA-GGELFDYIVE----KKRMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMT  159 (336)
T ss_dssp             ECCC-CEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTT
T ss_pred             EECC-CCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccceecc
Confidence            9999 7899999874    346999999999999999999999   8899999999999999999999999999998654


Q ss_pred             C-----CCcCCCcccCcccccCCCC-CCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhhc
Q 047245          260 G-----SLIATSAYSAPECFQNRSY-TDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREALD  333 (380)
Q Consensus       260 ~-----~~~~~~~y~aPE~~~~~~~-~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  333 (380)
                      .     ...||+.|+|||.+.+..+ +.++||||||+++|||++|..||.......                  ....+.
T Consensus       160 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~------------------~~~~i~  221 (336)
T 3h4j_B          160 DGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN------------------LFKKVN  221 (336)
T ss_dssp             TSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTT------------------CBCCCC
T ss_pred             CCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHH------------------HHHHHH
Confidence            3     3458999999999988776 689999999999999999999996421110                  000011


Q ss_pred             hhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          334 RSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      ...  ...+......+.+++.+||+.||.+|||++|+++
T Consensus       222 ~~~--~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~  258 (336)
T 3h4j_B          222 SCV--YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRR  258 (336)
T ss_dssp             SSC--CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred             cCC--CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            000  0111223455789999999999999999999874


No 84 
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3.1e-44  Score=335.66  Aligned_cols=251  Identities=25%  Similarity=0.346  Sum_probs=198.8

Q ss_pred             ccccccCccCCeeEEEEEe------cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcC-CCCCcceeeEEEec
Q 047245          100 NENRLLGSSPDGKYYRTVL------DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASL-RHRNLMSLRAYVPE  172 (380)
Q Consensus       100 ~~~~~lg~G~~g~vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~  172 (380)
                      ...+.||+|+||.||++..      .++..||+|.+....       .....+.+.+|+.+++++ +||||+++++++..
T Consensus        48 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~  120 (344)
T 1rjb_A           48 EFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-------DSSEREALMSELKMMTQLGSHENIVNLLGACTL  120 (344)
T ss_dssp             EEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             eeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc-------CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee
Confidence            3567899999999999996      246689999997421       122347788999999999 89999999999999


Q ss_pred             CCeEEEEEeecCCCCHHHHHHHhhhc-------------------ccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecC
Q 047245          173 SSRFYLVYDYLQTGSLEDAMDRIREN-------------------QLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYN  233 (380)
Q Consensus       173 ~~~~~lv~e~~~~gsL~~~l~~~~~~-------------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~d  233 (380)
                      .+..++||||+++|+|.+++......                   ...+++..++.++.|++.||+|||   +.+++|||
T Consensus       121 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~D  197 (344)
T 1rjb_A          121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRD  197 (344)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEETT
T ss_pred             CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcccCC
Confidence            99999999999999999999753211                   134899999999999999999999   89999999


Q ss_pred             CCCCcEEeCCCCceEEeccCCcccCCC--------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCc
Q 047245          234 LKPTNVMLDAEFTPRLADFGLAKLMPG--------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAP  304 (380)
Q Consensus       234 lk~~Nill~~~~~~kl~Dfgl~~~~~~--------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~  304 (380)
                      |||+||+++.++.+||+|||++.....        ...+|+.|+|||.+.+..++.++||||||+++|||++ |..||..
T Consensus       198 ikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~  277 (344)
T 1rjb_A          198 LAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG  277 (344)
T ss_dssp             CSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred             CChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCccc
Confidence            999999999999999999999975432        2236778999999999999999999999999999998 9999864


Q ss_pred             hhhhccCCCCHHHHHHHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          305 FFAEAASGGSLGRWLRHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       305 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                      ..    .   ... .......+         .. ...+......+.+++.+||+.||.+|||+.|+++.|+.+.
T Consensus       278 ~~----~---~~~-~~~~~~~~---------~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~  333 (344)
T 1rjb_A          278 IP----V---DAN-FYKLIQNG---------FK-MDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQL  333 (344)
T ss_dssp             CC----C---SHH-HHHHHHTT---------CC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             CC----c---HHH-HHHHHhcC---------CC-CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence            10    0   011 11111111         00 1111223456889999999999999999999999998763


No 85 
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00  E-value=1.1e-43  Score=332.46  Aligned_cols=242  Identities=25%  Similarity=0.380  Sum_probs=196.2

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||+|.. .+|+.||||++.....     ......+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        58 ~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  132 (348)
T 1u5q_A           58 DLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK-----QSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV  132 (348)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSS-----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             eeeEEccCCCEEEEEEEEccCCeEEEEEEEccccc-----cchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence            446799999999999996 6789999999975321     1233457889999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||++ |+|.+++..   ....+++..+..++.|++.||+|||   +.+++||||||+|||++.++.+||+|||+++...
T Consensus       133 ~e~~~-g~l~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~  205 (348)
T 1u5q_A          133 MEYCL-GSASDLLEV---HKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA  205 (348)
T ss_dssp             EECCS-EEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSS
T ss_pred             EecCC-CCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceecC
Confidence            99997 689888863   2457999999999999999999999   8899999999999999999999999999998654


Q ss_pred             C--CCcCCCcccCccccc---CCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhhch
Q 047245          260 G--SLIATSAYSAPECFQ---NRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREALDR  334 (380)
Q Consensus       260 ~--~~~~~~~y~aPE~~~---~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  334 (380)
                      .  ...||+.|+|||.+.   ...++.++||||||+++|||++|..||...        .............      .+
T Consensus       206 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~--------~~~~~~~~~~~~~------~~  271 (348)
T 1u5q_A          206 PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM--------NAMSALYHIAQNE------SP  271 (348)
T ss_dssp             SBCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--------CHHHHHHHHHHSC------CC
T ss_pred             CCCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC--------ChHHHHHHHHhcC------CC
Confidence            3  346899999999984   567899999999999999999999998531        1112222222111      11


Q ss_pred             hccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          335 SILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       335 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      ....    ......+.+++.+||+.||++|||++++++
T Consensus       272 ~~~~----~~~~~~l~~li~~~l~~dP~~Rps~~~ll~  305 (348)
T 1u5q_A          272 ALQS----GHWSEYFRNFVDSCLQKIPQDRPTSEVLLK  305 (348)
T ss_dssp             CCCC----TTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CCCC----CCCCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence            1111    123345788999999999999999999874


No 86 
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00  E-value=5.6e-44  Score=327.67  Aligned_cols=256  Identities=25%  Similarity=0.379  Sum_probs=199.9

Q ss_pred             hccccccCccCCeeEEEEEe-----cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecC
Q 047245           99 ANENRLLGSSPDGKYYRTVL-----DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPES  173 (380)
Q Consensus        99 ~~~~~~lg~G~~g~vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  173 (380)
                      ....+.||+|+||.||++..     .+|+.||+|++.....       ....+.+.+|+.++++++||||+++++++.+.
T Consensus        23 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   95 (302)
T 4e5w_A           23 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG-------GNHIADLKKEIEILRNLYHENIVKYKGICTED   95 (302)
T ss_dssp             EEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-
T ss_pred             hhhhhccCCCCceEEEEEEEccccCccCeEEEEEEeccccc-------chhHHHHHHHHHHHHhCCCCCeeeeeeEEecC
Confidence            34557899999999999983     4689999999975221       11236788999999999999999999999876


Q ss_pred             --CeEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEec
Q 047245          174 --SRFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLAD  251 (380)
Q Consensus       174 --~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~D  251 (380)
                        ...++||||+++|+|.+++..   ....+++..++.++.|++.||+|||   +.+++||||||+||+++.++.+||+|
T Consensus        96 ~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~D  169 (302)
T 4e5w_A           96 GGNGIKLIMEFLPSGSLKEYLPK---NKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGD  169 (302)
T ss_dssp             --CCEEEEEECCTTCBHHHHHHH---HTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECC
T ss_pred             CCceEEEEEEeCCCCcHHHHHHh---ccccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECc
Confidence              668999999999999999964   2456899999999999999999999   89999999999999999999999999


Q ss_pred             cCCcccCCC---------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhcc-------CCCCH
Q 047245          252 FGLAKLMPG---------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAA-------SGGSL  315 (380)
Q Consensus       252 fgl~~~~~~---------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~-------~~~~l  315 (380)
                      ||++.....         ...+|..|+|||.+.+..++.++||||||+++|||++|..|+........       .....
T Consensus       170 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~  249 (302)
T 4e5w_A          170 FGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTV  249 (302)
T ss_dssp             CTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHH
T ss_pred             ccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCH
Confidence            999976543         23477789999999999999999999999999999999998653211100       00000


Q ss_pred             HHHHHHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          316 GRWLRHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                      ....          ..+.... ....+......+.+++.+||+.||.+|||++++++.|+++.
T Consensus       250 ~~~~----------~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll  301 (302)
T 4e5w_A          250 TRLV----------NTLKEGK-RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL  301 (302)
T ss_dssp             HHHH----------HHHHTTC-CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHH----------HHHhccC-CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence            0111          1111111 01122234566889999999999999999999999999863


No 87 
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00  E-value=6.9e-44  Score=326.71  Aligned_cols=246  Identities=19%  Similarity=0.304  Sum_probs=188.8

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChh------------------hhcHHHHHHHHHHHHHHHcCCCC
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPE------------------KQNKSVKRRIQQELEVLASLRHR  161 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~------------------~~~~~~~~~~~~E~~~l~~l~h~  161 (380)
                      ..+.||+|+||.||++.. .+|+.||+|++.........                  .......+.+.+|++++++++||
T Consensus        17 ~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~   96 (298)
T 2zv2_A           17 LKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHP   96 (298)
T ss_dssp             EEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCT
T ss_pred             EEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCC
Confidence            457899999999999986 46889999999753211100                  00112246788999999999999


Q ss_pred             CcceeeEEEec--CCeEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcE
Q 047245          162 NLMSLRAYVPE--SSRFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNV  239 (380)
Q Consensus       162 niv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Ni  239 (380)
                      ||+++++++.+  .+..++||||+++|+|.+++.     ...+++..+..++.|++.||+|||   +.+++||||||+||
T Consensus        97 ~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Ni  168 (298)
T 2zv2_A           97 NVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT-----LKPLSEDQARFYFQDLIKGIEYLH---YQKIIHRDIKPSNL  168 (298)
T ss_dssp             TBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC-----SSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGE
T ss_pred             CCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHE
Confidence            99999999986  568999999999999987653     447999999999999999999999   88999999999999


Q ss_pred             EeCCCCceEEeccCCcccCCC------CCcCCCcccCcccccCCC---CCCcchhhHHHHHHHHHHhCCCCCCchhhhcc
Q 047245          240 MLDAEFTPRLADFGLAKLMPG------SLIATSAYSAPECFQNRS---YTDKSDIFSFGMILAVLLTGRDPTAPFFAEAA  310 (380)
Q Consensus       240 ll~~~~~~kl~Dfgl~~~~~~------~~~~~~~y~aPE~~~~~~---~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~  310 (380)
                      |++.++.+||+|||+++....      ...||+.|+|||.+.+..   ++.++||||||+++|||++|+.||...     
T Consensus       169 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~-----  243 (298)
T 2zv2_A          169 LVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE-----  243 (298)
T ss_dssp             EECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCS-----
T ss_pred             EECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCc-----
Confidence            999999999999999976543      245899999999998765   377899999999999999999998631     


Q ss_pred             CCCCHHHHHHHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          311 SGGSLGRWLRHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       311 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                         ....+........     ..     ..........+.+++.+||+.||++|||+.|+++
T Consensus       244 ---~~~~~~~~~~~~~-----~~-----~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          244 ---RIMCLHSKIKSQA-----LE-----FPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             ---SHHHHHHHHHHCC-----CC-----CCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             ---cHHHHHHHHhccc-----CC-----CCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence               1222222211110     00     0011123455889999999999999999999864


No 88 
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=8.6e-44  Score=324.32  Aligned_cols=242  Identities=19%  Similarity=0.282  Sum_probs=198.2

Q ss_pred             cccCccCCeeEEEEEec---CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          103 RLLGSSPDGKYYRTVLD---NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       103 ~~lg~G~~g~vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      +.||+|+||.||+|...   ++..||+|++...       ......+.+.+|+.++++++||||+++++++. .+..++|
T Consensus        16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~-------~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~lv   87 (287)
T 1u59_A           16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG-------TEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALMLV   87 (287)
T ss_dssp             EEEECCTTEEEEEEEEC---CCEEEEEEEECSS-------CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEE
T ss_pred             ccccccCceeEEEeEeccCCCcceEEEEecCCc-------cchhHHHHHHHHHHHHHhCCCCCEeEEEEEec-CCCcEEE
Confidence            47999999999999853   6788999999752       12344578999999999999999999999994 4668999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||+++++|.+++..   ....+++..++.++.|++.||+|||   +.+++||||||+||+++.++.+||+|||++....
T Consensus        88 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~  161 (287)
T 1u59_A           88 MEMAGGGPLHKFLVG---KREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALG  161 (287)
T ss_dssp             EECCTTEEHHHHHTT---CTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred             EEeCCCCCHHHHHHh---CCccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeeec
Confidence            999999999999863   3456899999999999999999999   8999999999999999999999999999997654


Q ss_pred             CC---------CcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhccCCCCHHHHHHHHHhhcchh
Q 047245          260 GS---------LIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEAASGGSLGRWLRHLQHAGEAR  329 (380)
Q Consensus       260 ~~---------~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~  329 (380)
                      ..         ..+++.|+|||.+.+..++.++||||||+++|||++ |..||...        ...+.........   
T Consensus       162 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~--------~~~~~~~~i~~~~---  230 (287)
T 1u59_A          162 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM--------KGPEVMAFIEQGK---  230 (287)
T ss_dssp             TCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC--------CTHHHHHHHHTTC---
T ss_pred             cCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC--------CHHHHHHHHhcCC---
Confidence            21         235788999999998889999999999999999999 99998631        1111111111110   


Q ss_pred             HhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhcc
Q 047245          330 EALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQL  377 (380)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l  377 (380)
                              ....+......+.+++..||+.||++|||+.++++.|+++
T Consensus       231 --------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~  270 (287)
T 1u59_A          231 --------RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC  270 (287)
T ss_dssp             --------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             --------cCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence                    0111223455688999999999999999999999999876


No 89 
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00  E-value=8.1e-44  Score=325.12  Aligned_cols=241  Identities=20%  Similarity=0.312  Sum_probs=195.4

Q ss_pred             ccCccCCeeEEEEEe---cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEEE
Q 047245          104 LLGSSPDGKYYRTVL---DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLVY  180 (380)
Q Consensus       104 ~lg~G~~g~vy~~~~---~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  180 (380)
                      .||+|+||.||++..   .++..||||++....      ......+.+.+|+.++++++||||+++++++ +.+..++||
T Consensus        24 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~   96 (291)
T 1xbb_A           24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA------NDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVM   96 (291)
T ss_dssp             EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----------CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEE
T ss_pred             ccccccCeeeEeeeecCCCceeeEEEEeecccc------cCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEE
Confidence            899999999999964   346889999997522      2234457899999999999999999999999 556789999


Q ss_pred             eecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCCC
Q 047245          181 DYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMPG  260 (380)
Q Consensus       181 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~  260 (380)
                      ||+++++|.+++..    ...+++..++.++.|++.||+|||   +.+++||||||+||+++.++.+||+|||++.....
T Consensus        97 e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~  169 (291)
T 1xbb_A           97 EMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA  169 (291)
T ss_dssp             ECCTTEEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred             EeCCCCCHHHHHHh----CcCCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCcceeecc
Confidence            99999999999974    346899999999999999999999   88999999999999999999999999999976543


Q ss_pred             C---------CcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhccCCCCHHHHHHHHHhhcchhH
Q 047245          261 S---------LIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEAASGGSLGRWLRHLQHAGEARE  330 (380)
Q Consensus       261 ~---------~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  330 (380)
                      .         ..+++.|+|||.+.+..++.++||||||+++|||++ |..||...        .............    
T Consensus       170 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--------~~~~~~~~~~~~~----  237 (291)
T 1xbb_A          170 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM--------KGSEVTAMLEKGE----  237 (291)
T ss_dssp             TCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTC--------CHHHHHHHHHTTC----
T ss_pred             CCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCC--------CHHHHHHHHHcCC----
Confidence            2         235678999999998889999999999999999999 99998641        1111111111110    


Q ss_pred             hhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhcc
Q 047245          331 ALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQL  377 (380)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l  377 (380)
                            . ...+......+.+++.+||+.||++|||+.++++.|+++
T Consensus       238 ------~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~  277 (291)
T 1xbb_A          238 ------R-MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY  277 (291)
T ss_dssp             ------C-CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             ------C-CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence                  0 111223455688999999999999999999999999876


No 90 
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00  E-value=1.9e-43  Score=328.56  Aligned_cols=247  Identities=19%  Similarity=0.226  Sum_probs=198.4

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcC-CCCCcceeeEEEecCCeEEE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASL-RHRNLMSLRAYVPESSRFYL  178 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l  178 (380)
                      ..+.||+|+||.||+|.. .+|+.||||++.....          ...+.+|+.+++++ +||||+++++++...+..++
T Consensus        13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----------~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~l   82 (330)
T 2izr_A           13 VGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR----------APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAM   82 (330)
T ss_dssp             EEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS----------SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEE
T ss_pred             EEEEeeccCCceEEEEEECCCCcEEEEEEeccccc----------hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEE
Confidence            356899999999999996 6789999999865221          13577899999999 99999999999999999999


Q ss_pred             EEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCc-----eEEeccC
Q 047245          179 VYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFT-----PRLADFG  253 (380)
Q Consensus       179 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~-----~kl~Dfg  253 (380)
                      ||||+ +++|.+++...   ...+++..++.++.|++.||+|||   +.+++||||||+|||++.++.     +||+|||
T Consensus        83 v~e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg  155 (330)
T 2izr_A           83 VLELL-GPSLEDLFDLC---DRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFA  155 (330)
T ss_dssp             EEECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCT
T ss_pred             EEEeC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEcc
Confidence            99999 99999999742   457999999999999999999999   889999999999999998887     9999999


Q ss_pred             CcccCC-------------CCCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHH
Q 047245          254 LAKLMP-------------GSLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLR  320 (380)
Q Consensus       254 l~~~~~-------------~~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~  320 (380)
                      +++...             ....||+.|+|||.+.+..++.++||||||+++|||++|..||...     ..........
T Consensus       156 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~-----~~~~~~~~~~  230 (330)
T 2izr_A          156 LAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGL-----KADTLKERYQ  230 (330)
T ss_dssp             TCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTC-----CCSSHHHHHH
T ss_pred             cceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccc-----ccccHHHHHH
Confidence            997542             1335899999999999999999999999999999999999998642     1122222222


Q ss_pred             HHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhcc
Q 047245          321 HLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQL  377 (380)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l  377 (380)
                      .......   ..........    .+ .+.+++..||+.||.+||++++|++.|+++
T Consensus       231 ~i~~~~~---~~~~~~~~~~----~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~  279 (330)
T 2izr_A          231 KIGDTKR---ATPIEVLCEN----FP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDL  279 (330)
T ss_dssp             HHHHHHH---HSCHHHHTTT----CH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred             HHHhhhc---cCCHHHHhcc----Ch-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence            2211100   0000000011    12 688999999999999999999999999865


No 91 
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00  E-value=3.3e-43  Score=321.85  Aligned_cols=248  Identities=17%  Similarity=0.193  Sum_probs=197.7

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcC-CCCCcceeeEEEecCCeEEE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASL-RHRNLMSLRAYVPESSRFYL  178 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l  178 (380)
                      ..+.||+|+||.||++.. .+|+.||+|++.....          ...+.+|+..++++ +|+|++++++++.+....++
T Consensus        14 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----------~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~l   83 (298)
T 1csn_A           14 VGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD----------APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVL   83 (298)
T ss_dssp             EEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT----------SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEE
T ss_pred             EEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc----------cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEE
Confidence            456899999999999995 6789999999864221          14567899999999 89999999999999999999


Q ss_pred             EEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCc-----eEEeccC
Q 047245          179 VYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFT-----PRLADFG  253 (380)
Q Consensus       179 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~-----~kl~Dfg  253 (380)
                      ||||+ +++|.+++...   ...+++..+..++.|++.||+|||   +.+++||||||+||+++.++.     +||+|||
T Consensus        84 v~e~~-~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg  156 (298)
T 1csn_A           84 VIDLL-GPSLEDLLDLC---GRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFG  156 (298)
T ss_dssp             EEECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCT
T ss_pred             EEEec-CCCHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECc
Confidence            99999 99999999742   346999999999999999999999   999999999999999987766     9999999


Q ss_pred             CcccCCC-------------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHH
Q 047245          254 LAKLMPG-------------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLR  320 (380)
Q Consensus       254 l~~~~~~-------------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~  320 (380)
                      +++....             ...||+.|+|||.+.+..++.++||||||+++|||++|+.||....     .........
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-----~~~~~~~~~  231 (298)
T 1csn_A          157 MVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK-----AATNKQKYE  231 (298)
T ss_dssp             TCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC-----SCCHHHHHH
T ss_pred             cccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhh-----ccccHHHHH
Confidence            9975432             2348999999999999999999999999999999999999986421     111111111


Q ss_pred             HHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhcc
Q 047245          321 HLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQL  377 (380)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l  377 (380)
                      ....... . ...+.+     ....+..+.+++.+||+.||++|||+++|++.|+++
T Consensus       232 ~~~~~~~-~-~~~~~~-----~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~  281 (298)
T 1csn_A          232 RIGEKKQ-S-TPLREL-----CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKV  281 (298)
T ss_dssp             HHHHHHH-H-SCHHHH-----TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred             HHHhhcc-C-ccHHHH-----HhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHH
Confidence            1111100 0 000000     012345688999999999999999999999999876


No 92 
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=8.6e-44  Score=356.39  Aligned_cols=241  Identities=19%  Similarity=0.284  Sum_probs=195.9

Q ss_pred             ccCccCCeeEEEEEec---CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEEE
Q 047245          104 LLGSSPDGKYYRTVLD---NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLVY  180 (380)
Q Consensus       104 ~lg~G~~g~vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  180 (380)
                      .||+|+||.||+|...   ++..||||+++....       ....+.+.+|+.++++++||||+++++++.+ +..++||
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~-------~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~  414 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE-------KADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVM  414 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCS-------STTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEE
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCC-------hHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEE
Confidence            6999999999999874   566899999975311       1224778999999999999999999999976 5689999


Q ss_pred             eecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCCC
Q 047245          181 DYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMPG  260 (380)
Q Consensus       181 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~  260 (380)
                      ||+++|+|.+++..   ....+++..+..++.|++.||+|||   +.+|+||||||+|||+++++.+||+|||+++....
T Consensus       415 E~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~  488 (613)
T 2ozo_A          415 EMAGGGPLHKFLVG---KREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGA  488 (613)
T ss_dssp             ECCTTCBHHHHHTT---CTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-
T ss_pred             EeCCCCcHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccC
Confidence            99999999999963   3456999999999999999999999   89999999999999999999999999999987542


Q ss_pred             C---------CcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhccCCCCHHHHHHHHHhhcchhH
Q 047245          261 S---------LIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEAASGGSLGRWLRHLQHAGEARE  330 (380)
Q Consensus       261 ~---------~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  330 (380)
                      .         ..+++.|+|||.+.+..++.++||||||+++|||++ |+.||...        ...+.........    
T Consensus       489 ~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~--------~~~~~~~~i~~~~----  556 (613)
T 2ozo_A          489 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM--------KGPEVMAFIEQGK----  556 (613)
T ss_dssp             -------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--------CSHHHHHHHHTTC----
T ss_pred             CCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC--------CHHHHHHHHHcCC----
Confidence            2         125678999999999999999999999999999998 99998641        1111111111111    


Q ss_pred             hhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhcc
Q 047245          331 ALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQL  377 (380)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l  377 (380)
                            . ...+......+.+++..||+.||++|||+.++++.|+.+
T Consensus       557 ------~-~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~  596 (613)
T 2ozo_A          557 ------R-MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC  596 (613)
T ss_dssp             ------C-CCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHH
T ss_pred             ------C-CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence                  0 112233456688999999999999999999999999875


No 93 
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00  E-value=4.7e-44  Score=359.22  Aligned_cols=242  Identities=19%  Similarity=0.305  Sum_probs=196.6

Q ss_pred             cccCccCCeeEEEEEec---CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          103 RLLGSSPDGKYYRTVLD---NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       103 ~~lg~G~~g~vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      +.||+|+||.||+|...   .+..||||+++...      ......+++.+|+.++++++||||+++++++.+ +..++|
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~------~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv  447 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA------NDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLV  447 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGG------GCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEE
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEecccc------CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEE
Confidence            47999999999999763   46789999997522      222335789999999999999999999999975 458899


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||+++|+|.+++..    ...+++..++.++.||+.||+|||   +.+|+||||||+|||++.++.+||+|||+++...
T Consensus       448 ~E~~~~g~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~  520 (635)
T 4fl3_A          448 MEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR  520 (635)
T ss_dssp             EECCTTEEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTT
T ss_pred             EEccCCCCHHHHHhh----CCCCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccc
Confidence            999999999999974    456899999999999999999999   8899999999999999999999999999997654


Q ss_pred             CC---------CcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhccCCCCHHHHHHHHHhhcchh
Q 047245          260 GS---------LIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEAASGGSLGRWLRHLQHAGEAR  329 (380)
Q Consensus       260 ~~---------~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~  329 (380)
                      ..         ..+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...        ...+.......     
T Consensus       521 ~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~--------~~~~~~~~i~~-----  587 (635)
T 4fl3_A          521 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM--------KGSEVTAMLEK-----  587 (635)
T ss_dssp             C-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC--------CHHHHHHHHHT-----
T ss_pred             cCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--------CHHHHHHHHHc-----
Confidence            21         235678999999999999999999999999999998 99998641        11111111111     


Q ss_pred             HhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhcc
Q 047245          330 EALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQL  377 (380)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l  377 (380)
                           ... ...+......+.+++..||+.||++|||+++|++.|+++
T Consensus       588 -----~~~-~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~  629 (635)
T 4fl3_A          588 -----GER-MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY  629 (635)
T ss_dssp             -----TCC-CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             -----CCC-CCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence                 110 111233456688999999999999999999999999875


No 94 
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00  E-value=6.3e-44  Score=330.81  Aligned_cols=241  Identities=22%  Similarity=0.331  Sum_probs=192.2

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++... +++.||+|++.....       ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus        11 i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv   83 (323)
T 3tki_A           11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-------VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF   83 (323)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             eeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc-------cchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence            3568999999999999874 789999999965221       12235688999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||+++|+|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+|||++.++.+||+|||+++...
T Consensus        84 ~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~  156 (323)
T 3tki_A           84 LEYCSGGELFDRIEP----DIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFR  156 (323)
T ss_dssp             EECCTTEEGGGGSBT----TTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred             EEcCCCCcHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceec
Confidence            999999999998863    446899999999999999999999   8999999999999999999999999999997542


Q ss_pred             --------CCCcCCCcccCcccccCCCC-CCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhH
Q 047245          260 --------GSLIATSAYSAPECFQNRSY-TDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEARE  330 (380)
Q Consensus       260 --------~~~~~~~~y~aPE~~~~~~~-~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  330 (380)
                              ....||+.|+|||.+.+..+ +.++||||||+++|||++|..||......      ...+... .....   
T Consensus       157 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~~~~~-~~~~~---  226 (323)
T 3tki_A          157 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS------CQEYSDW-KEKKT---  226 (323)
T ss_dssp             ETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTT------SHHHHHH-HTTCT---
T ss_pred             cCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchH------HHHHHHH-hcccc---
Confidence                    23458999999999988775 77899999999999999999999642110      0111111 11000   


Q ss_pred             hhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          331 ALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                            . ..........+.+++.+||+.||++|||++|+++
T Consensus       227 ------~-~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~  261 (323)
T 3tki_A          227 ------Y-LNPWKKIDSAPLALLHKILVENPSARITIPDIKK  261 (323)
T ss_dssp             ------T-STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ------c-CCccccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence                  0 0011223455778999999999999999999875


No 95 
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00  E-value=1.5e-43  Score=323.04  Aligned_cols=250  Identities=23%  Similarity=0.409  Sum_probs=191.3

Q ss_pred             ccccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          100 NENRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       100 ~~~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ...+.||+|+||.||++...  ..+|+|++....      ......+.+.+|+.++++++||||+++++++ .....++|
T Consensus        27 ~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv   97 (289)
T 3og7_A           27 TVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTA------PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIV   97 (289)
T ss_dssp             EEEEEEEECSSEEEEEEESS--SEEEEEEESCSS------CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEE
T ss_pred             eeeeEecCCCCeEEEEEEEc--CceEEEEEeccC------CCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEE
Confidence            35578999999999999864  359999997532      2334457899999999999999999999976 44568999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||+++++|.+++..   ....+++..++.++.|++.||+|||   +.+++||||||+||+++.++.+||+|||+++...
T Consensus        98 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~  171 (289)
T 3og7_A           98 TQWCEGSSLYHHLHA---SETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKS  171 (289)
T ss_dssp             EECCCEEEHHHHHTT---C---CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC------
T ss_pred             EEecCCCcHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceeccccc
Confidence            999999999999863   3456899999999999999999999   8999999999999999999999999999987543


Q ss_pred             C--------CCcCCCcccCccccc---CCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcch
Q 047245          260 G--------SLIATSAYSAPECFQ---NRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEA  328 (380)
Q Consensus       260 ~--------~~~~~~~y~aPE~~~---~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~  328 (380)
                      .        ...|++.|+|||.+.   +..++.++||||||+++|||++|+.||...       ........... .+..
T Consensus       172 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~-------~~~~~~~~~~~-~~~~  243 (289)
T 3og7_A          172 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNI-------NNRDQIIEMVG-RGSL  243 (289)
T ss_dssp             ------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSC-------CCHHHHHHHHH-HTSC
T ss_pred             cccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCcccc-------chHHHHHHHhc-cccc
Confidence            2        235899999999986   567888999999999999999999998631       11111111111 1111


Q ss_pred             hHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          329 REALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                      .    +..  .......+..+.+++.+||+.||++|||+.|+++.|+++.
T Consensus       244 ~----~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~  287 (289)
T 3og7_A          244 S----PDL--SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA  287 (289)
T ss_dssp             C----CCT--TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             C----cch--hhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence            0    000  1111234566889999999999999999999999999874


No 96 
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00  E-value=2.9e-43  Score=326.66  Aligned_cols=243  Identities=21%  Similarity=0.329  Sum_probs=178.6

Q ss_pred             ccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCC-CCCcceeeEEEecCCeEEEE
Q 047245          102 NRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLR-HRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       102 ~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv  179 (380)
                      .+.||+|+||.||++... +|+.||||++...           ....+.+|+.+++.++ ||||+++++++.+....++|
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv   84 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-----------MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLV   84 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-----------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChh-----------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEE
Confidence            467999999999999974 6899999998641           1256778999999996 99999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCC---ceEEeccCCcc
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEF---TPRLADFGLAK  256 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~---~~kl~Dfgl~~  256 (380)
                      |||+++|+|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+|||++.++   .+||+|||+++
T Consensus        85 ~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~  157 (325)
T 3kn6_A           85 MELLNGGELFERIKK----KKHFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFAR  157 (325)
T ss_dssp             ECCCCSCBHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCE
T ss_pred             EEccCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccce
Confidence            999999999999974    457999999999999999999999   89999999999999997665   89999999997


Q ss_pred             cCCC------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhH
Q 047245          257 LMPG------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEARE  330 (380)
Q Consensus       257 ~~~~------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  330 (380)
                      ....      ...+|+.|+|||.+.+..++.++||||||+++|||++|..||....... ......+..........   
T Consensus       158 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~~~~~~~~i~~~~~---  233 (325)
T 3kn6_A          158 LKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSL-TCTSAVEIMKKIKKGDF---  233 (325)
T ss_dssp             ECCC----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC--------CCCHHHHHHHHTTTCC---
T ss_pred             ecCCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCcccc-ccccHHHHHHHHHcCCC---
Confidence            6542      2347899999999999999999999999999999999999996421111 11112222222111100   


Q ss_pred             hhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHH
Q 047245          331 ALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELV  371 (380)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl  371 (380)
                          .. ...........+.+++.+||+.||.+|||++|++
T Consensus       234 ----~~-~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell  269 (325)
T 3kn6_A          234 ----SF-EGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLR  269 (325)
T ss_dssp             ----CC-CSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTST
T ss_pred             ----CC-CcccccCCCHHHHHHHHHHCCCChhHCCCHHHHh
Confidence                00 0011122456688999999999999999999987


No 97 
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00  E-value=1.3e-43  Score=332.19  Aligned_cols=235  Identities=23%  Similarity=0.270  Sum_probs=191.8

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcC-CCCCcceeeEEEecCCeEEE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASL-RHRNLMSLRAYVPESSRFYL  178 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l  178 (380)
                      ..+.||+|+||.||++.. .+|+.||+|++....     .......+.+.+|..++..+ +||||+++++++.+.+..++
T Consensus        27 ~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~-----~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  101 (353)
T 3txo_A           27 FIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDV-----ILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF  101 (353)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHH-----HHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             EEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHH-----hcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence            457899999999999997 468999999997521     01122346678899999998 79999999999999999999


Q ss_pred             EEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccC
Q 047245          179 VYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLM  258 (380)
Q Consensus       179 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~  258 (380)
                      ||||+++|+|.+++..    ...+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||+++..
T Consensus       102 v~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~  174 (353)
T 3txo_A          102 VMEFVNGGDLMFHIQK----SRRFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEG  174 (353)
T ss_dssp             EEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred             EEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccceeec
Confidence            9999999999999975    346899999999999999999999   899999999999999999999999999999853


Q ss_pred             CC------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhh
Q 047245          259 PG------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREAL  332 (380)
Q Consensus       259 ~~------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  332 (380)
                      ..      ...||+.|+|||.+.+..++.++||||||+++|||++|..||...        ...+.........      
T Consensus       175 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~--------~~~~~~~~i~~~~------  240 (353)
T 3txo_A          175 ICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAE--------NEDDLFEAILNDE------  240 (353)
T ss_dssp             CC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHCC------
T ss_pred             ccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCC--------CHHHHHHHHHcCC------
Confidence            32      235899999999999989999999999999999999999999641        1222222222111      


Q ss_pred             chhccCCcccHHHHHHHHHHHHHcccCCCCCCCCH
Q 047245          333 DRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSS  367 (380)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~  367 (380)
                         .   ..+......+.+++.+||+.||++||++
T Consensus       241 ---~---~~p~~~~~~~~~li~~lL~~dP~~R~~~  269 (353)
T 3txo_A          241 ---V---VYPTWLHEDATGILKSFMTKNPTMRLGS  269 (353)
T ss_dssp             ---C---CCCTTSCHHHHHHHHHHTCSSGGGSTTS
T ss_pred             ---C---CCCCCCCHHHHHHHHHHhhhCHHHccCC
Confidence               0   1112234557899999999999999998


No 98 
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=4.8e-44  Score=337.83  Aligned_cols=245  Identities=24%  Similarity=0.362  Sum_probs=188.7

Q ss_pred             cccccCccCCeeEEEEEec--CC--cEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEec-CCe
Q 047245          101 ENRLLGSSPDGKYYRTVLD--NG--LTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPE-SSR  175 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~--~g--~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~  175 (380)
                      ..+.||+|+||.||+|...  ++  ..||+|.+....       .....+.+.+|+.++++++||||+++++++.+ .+.
T Consensus        93 ~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~  165 (373)
T 3c1x_A           93 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-------DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGS  165 (373)
T ss_dssp             EEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS-------CSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSC
T ss_pred             cCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC-------CHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCC
Confidence            3468999999999999863  22  368999886421       22345789999999999999999999998754 457


Q ss_pred             EEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCc
Q 047245          176 FYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLA  255 (380)
Q Consensus       176 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~  255 (380)
                      .++||||+++|+|.+++..   ....+++..++.++.|++.||+|||   +.+++||||||+|||+++++.+||+|||++
T Consensus       166 ~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a  239 (373)
T 3c1x_A          166 PLVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLA  239 (373)
T ss_dssp             CEEEEECCTTCBHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC---
T ss_pred             eEEEEECCCCCCHHHHHhh---cccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeecccc
Confidence            8999999999999999963   3456889999999999999999999   899999999999999999999999999999


Q ss_pred             ccCCC----------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhccCCCCHHHHHHHHHh
Q 047245          256 KLMPG----------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEAASGGSLGRWLRHLQH  324 (380)
Q Consensus       256 ~~~~~----------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~l~~~~~~~~~  324 (380)
                      +....          ...+++.|+|||.+.+..++.++||||||+++|||++ |..||...     ........   ...
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~-----~~~~~~~~---~~~  311 (373)
T 3c1x_A          240 RDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-----NTFDITVY---LLQ  311 (373)
T ss_dssp             ------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS-----CSSCHHHH---HHT
T ss_pred             ccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCC-----CHHHHHHH---HHc
Confidence            75432          1236778999999999999999999999999999999 66666431     11111111   111


Q ss_pred             hcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhcc
Q 047245          325 AGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQL  377 (380)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l  377 (380)
                      ...           ...+......+.+++.+||+.||++|||++|+++.|+++
T Consensus       312 ~~~-----------~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i  353 (373)
T 3c1x_A          312 GRR-----------LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI  353 (373)
T ss_dssp             TCC-----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCC-----------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            110           011122345688999999999999999999999999876


No 99 
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00  E-value=1.1e-43  Score=330.61  Aligned_cols=250  Identities=21%  Similarity=0.386  Sum_probs=200.9

Q ss_pred             ccccccCccCCeeEEEEEe--------cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcC-CCCCcceeeEEE
Q 047245          100 NENRLLGSSPDGKYYRTVL--------DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASL-RHRNLMSLRAYV  170 (380)
Q Consensus       100 ~~~~~lg~G~~g~vy~~~~--------~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~  170 (380)
                      ...+.||+|+||.||++..        .++..||+|++...       ......+.+.+|+.+++++ +||||+++++++
T Consensus        38 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~-------~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  110 (334)
T 2pvf_A           38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-------ATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC  110 (334)
T ss_dssp             EEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTT-------CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             EEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccC-------CcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEE
Confidence            3567899999999999986        35678999998642       1234457889999999999 899999999999


Q ss_pred             ecCCeEEEEEeecCCCCHHHHHHHhhh------------cccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCc
Q 047245          171 PESSRFYLVYDYLQTGSLEDAMDRIRE------------NQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTN  238 (380)
Q Consensus       171 ~~~~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~N  238 (380)
                      .+.+..++||||+++|+|.+++.....            ....+++..++.++.|++.||+|||   +.+++||||||+|
T Consensus       111 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~N  187 (334)
T 2pvf_A          111 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARN  187 (334)
T ss_dssp             CSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGG
T ss_pred             ccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccce
Confidence            999999999999999999999975321            1234899999999999999999999   8999999999999


Q ss_pred             EEeCCCCceEEeccCCcccCCCC--------CcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhc
Q 047245          239 VMLDAEFTPRLADFGLAKLMPGS--------LIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEA  309 (380)
Q Consensus       239 ill~~~~~~kl~Dfgl~~~~~~~--------~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~  309 (380)
                      |+++.++.+||+|||+++.....        ..+++.|+|||.+.+..++.++||||||+++|||++ |..||...    
T Consensus       188 Ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~----  263 (334)
T 2pvf_A          188 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI----  263 (334)
T ss_dssp             EEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC----
T ss_pred             EEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcC----
Confidence            99999999999999999765432        236778999999998889999999999999999999 99998531    


Q ss_pred             cCCCCHHHHHHHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          310 ASGGSLGRWLRHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       310 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                          ...+..........           ...+......+.+++.+||+.||.+|||+.|+++.|+++.
T Consensus       264 ----~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~  317 (334)
T 2pvf_A          264 ----PVEELFKLLKEGHR-----------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL  317 (334)
T ss_dssp             ----CHHHHHHHHHHTCC-----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ----CHHHHHHHHhcCCC-----------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence                12222222211110           1111223456889999999999999999999999998863


No 100
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00  E-value=3.6e-44  Score=354.11  Aligned_cols=245  Identities=24%  Similarity=0.379  Sum_probs=201.8

Q ss_pred             ccccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          100 NENRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       100 ~~~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ...+.||+|+||.||+|...++..||||++.....         ..+.|.+|+.++++++||||+++++++.+ +..++|
T Consensus       270 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv  339 (535)
T 2h8h_A          270 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---------SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV  339 (535)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS---------CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred             hhheecccCCCeEEEEEEECCCceEEEEEeCCCCC---------CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEe
Confidence            35678999999999999998888999999975221         12578999999999999999999999976 678999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||+++|+|.+++...  ....+++..++.++.|++.||+|||   +.+++||||||+|||+++++.+||+|||+++...
T Consensus       340 ~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  414 (535)
T 2h8h_A          340 TEYMSKGSLLDFLKGE--TGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIE  414 (535)
T ss_dssp             ECCCTTEEHHHHHSHH--HHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCC
T ss_pred             eehhcCCcHHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccceecC
Confidence            9999999999999742  2346899999999999999999999   8999999999999999999999999999998764


Q ss_pred             C-------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhccCCCCHHHHHHHHHhhcchhHh
Q 047245          260 G-------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREA  331 (380)
Q Consensus       260 ~-------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  331 (380)
                      .       ...++..|+|||.+.+..++.++||||||+++|||++ |+.||...        ...+..........    
T Consensus       415 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~--------~~~~~~~~i~~~~~----  482 (535)
T 2h8h_A          415 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM--------VNREVLDQVERGYR----  482 (535)
T ss_dssp             CHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTC--------CHHHHHHHHHTTCC----
T ss_pred             CCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------CHHHHHHHHHcCCC----
Confidence            3       2346778999999999999999999999999999999 89998531        11122222111100    


Q ss_pred             hchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          332 LDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                             ...+......+.+++.+||+.||++|||+++|++.|+++.
T Consensus       483 -------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~  522 (535)
T 2h8h_A          483 -------MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF  522 (535)
T ss_dssp             -------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred             -------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence                   1112234556889999999999999999999999999873


No 101
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00  E-value=1.7e-43  Score=328.38  Aligned_cols=260  Identities=26%  Similarity=0.366  Sum_probs=201.7

Q ss_pred             cccccCccCCeeEEEEEe-----cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEe--cC
Q 047245          101 ENRLLGSSPDGKYYRTVL-----DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVP--ES  173 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~  173 (380)
                      ..+.||+|+||.||++..     .++..||+|++..        ......+.+.+|++++++++||||+++++++.  +.
T Consensus        27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~--------~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   98 (327)
T 3lxl_A           27 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQH--------SGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGR   98 (327)
T ss_dssp             EEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESS--------CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSS
T ss_pred             hhhhccCCCCeEEEEEEeccCCCCcceEEEEEEecc--------CCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCC
Confidence            457899999999999984     4688999999865        12344577899999999999999999999886  45


Q ss_pred             CeEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccC
Q 047245          174 SRFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFG  253 (380)
Q Consensus       174 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfg  253 (380)
                      ...++||||+++|+|.+++...   ...+++..++.++.|++.||+|||   +.+++||||||+||+++.++.+||+|||
T Consensus        99 ~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg  172 (327)
T 3lxl_A           99 QSLRLVMEYLPSGCLRDFLQRH---RARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFG  172 (327)
T ss_dssp             CEEEEEEECCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGG
T ss_pred             ceEEEEEeecCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEcccc
Confidence            6789999999999999999742   336899999999999999999999   8999999999999999999999999999


Q ss_pred             CcccCCC---------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHh
Q 047245          254 LAKLMPG---------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQH  324 (380)
Q Consensus       254 l~~~~~~---------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~  324 (380)
                      +++....         ...+++.|+|||.+.+..++.++||||||+++|||++|..||.....+........   .....
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~---~~~~~  249 (327)
T 3lxl_A          173 LAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCE---RDVPA  249 (327)
T ss_dssp             GCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC-------CCH
T ss_pred             cceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccc---ccccc
Confidence            9986542         22477789999999998899999999999999999999999864222110000000   00000


Q ss_pred             hcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          325 AGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                      .....+.+..... ...+......+.+++.+||+.||++|||++|+++.|+.+.
T Consensus       250 ~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~  302 (327)
T 3lxl_A          250 LSRLLELLEEGQR-LPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLW  302 (327)
T ss_dssp             HHHHHHHHHTTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-
T ss_pred             HHHHHHHhhcccC-CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            0001111111111 1122334566889999999999999999999999998763


No 102
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00  E-value=4e-43  Score=328.72  Aligned_cols=240  Identities=18%  Similarity=0.252  Sum_probs=197.2

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++... +|+.||+|++.....     ......+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        45 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv  119 (350)
T 1rdq_E           45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-----VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV  119 (350)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             EEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHh-----ccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence            3468999999999999974 689999999965210     1112246788999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||+++|+|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+|||++.++.+||+|||+++...
T Consensus       120 ~e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~  192 (350)
T 1rdq_E          120 MEYVAGGEMFSHLRR----IGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK  192 (350)
T ss_dssp             EECCTTCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred             EcCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccccceecc
Confidence            999999999999974    346899999999999999999999   8999999999999999999999999999998665


Q ss_pred             C---CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhhchhc
Q 047245          260 G---SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREALDRSI  336 (380)
Q Consensus       260 ~---~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  336 (380)
                      .   ...||+.|+|||.+.+..++.++||||||+++|||++|..||...        .............         .
T Consensus       193 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~--------~~~~~~~~i~~~~---------~  255 (350)
T 1rdq_E          193 GRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--------QPIQIYEKIVSGK---------V  255 (350)
T ss_dssp             SCBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHCC---------C
T ss_pred             CCcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCC--------CHHHHHHHHHcCC---------C
Confidence            4   345899999999999999999999999999999999999998631        1222222222111         0


Q ss_pred             cCCcccHHHHHHHHHHHHHcccCCCCCCCC-----HHhHHH
Q 047245          337 LGEEVEEDEMLMAVRIAVVCLSDSPADRPS-----SDELVP  372 (380)
Q Consensus       337 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs-----~~evl~  372 (380)
                         ..+......+.+++.+||+.||.+||+     ++|+++
T Consensus       256 ---~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~  293 (350)
T 1rdq_E          256 ---RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             ---CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             ---CCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence               111223456889999999999999998     777653


No 103
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00  E-value=7.3e-43  Score=331.92  Aligned_cols=193  Identities=22%  Similarity=0.286  Sum_probs=169.9

Q ss_pred             cccccCcc--CCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEE
Q 047245          101 ENRLLGSS--PDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFY  177 (380)
Q Consensus       101 ~~~~lg~G--~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  177 (380)
                      ..+.||+|  +||.||++... +|+.||||++....      ......+.+.+|+.++++++||||+++++++.+.+..+
T Consensus        29 ~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~  102 (389)
T 3gni_B           29 LLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEA------CSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW  102 (389)
T ss_dssp             EEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGG------SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             EEecccCCcCCceEEEEEEEcCCCCEEEEEEecccc------cChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence            45789999  99999999975 78999999997632      23345678889999999999999999999999999999


Q ss_pred             EEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCccc
Q 047245          178 LVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKL  257 (380)
Q Consensus       178 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~  257 (380)
                      +||||+++|+|.+++...  ....+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||.+..
T Consensus       103 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~  177 (389)
T 3gni_B          103 VVTSFMAYGSAKDLICTH--FMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLS  177 (389)
T ss_dssp             EEEECCTTCBHHHHHHHT--CTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred             EEEEccCCCCHHHHHhhh--cccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEccccccee
Confidence            999999999999999752  2356899999999999999999999   89999999999999999999999999998753


Q ss_pred             CC-------------CCCcCCCcccCcccccC--CCCCCcchhhHHHHHHHHHHhCCCCCCc
Q 047245          258 MP-------------GSLIATSAYSAPECFQN--RSYTDKSDIFSFGMILAVLLTGRDPTAP  304 (380)
Q Consensus       258 ~~-------------~~~~~~~~y~aPE~~~~--~~~~~~sDv~s~Gvil~el~tg~~p~~~  304 (380)
                      ..             ....||+.|+|||.+.+  ..++.++|||||||++|||++|+.||..
T Consensus       178 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  239 (389)
T 3gni_B          178 MISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD  239 (389)
T ss_dssp             CEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             eccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence            21             12358889999999987  6789999999999999999999999863


No 104
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00  E-value=9.6e-43  Score=317.79  Aligned_cols=241  Identities=22%  Similarity=0.372  Sum_probs=193.3

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEec----CCe
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPE----SSR  175 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~  175 (380)
                      ..+.||+|+||.||+|.. .++..||+|.+....      ......+.+.+|+.++++++||||+++++++..    ...
T Consensus        30 ~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~------~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~  103 (290)
T 1t4h_A           30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRK------LTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKC  103 (290)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGG------SCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEE
T ss_pred             eeeeccCCCCeEEEEeEecCCceEEEEEEecchh------hCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCce
Confidence            345799999999999987 467899999987522      233446789999999999999999999998865    456


Q ss_pred             EEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCC--eEecCCCCCcEEeC-CCCceEEecc
Q 047245          176 FYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQ--ILHYNLKPTNVMLD-AEFTPRLADF  252 (380)
Q Consensus       176 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--iiH~dlk~~Nill~-~~~~~kl~Df  252 (380)
                      .++||||+++|+|.+++..    ...+++..++.++.|++.||+|||   +.+  ++||||||+||+++ +++.+||+||
T Consensus       104 ~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Df  176 (290)
T 1t4h_A          104 IVLVTELMTSGTLKTYLKR----FKVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDL  176 (290)
T ss_dssp             EEEEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCT
T ss_pred             EEEEEEecCCCCHHHHHHH----ccCCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeC
Confidence            8999999999999999974    356899999999999999999999   777  99999999999998 7899999999


Q ss_pred             CCcccCCCC----CcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcch
Q 047245          253 GLAKLMPGS----LIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEA  328 (380)
Q Consensus       253 gl~~~~~~~----~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~  328 (380)
                      |++......    ..+++.|+|||.+. +.++.++||||||+++|+|++|..||...       ............... 
T Consensus       177 g~~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~-------~~~~~~~~~~~~~~~-  247 (290)
T 1t4h_A          177 GLATLKRASFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSEC-------QNAAQIYRRVTSGVK-  247 (290)
T ss_dssp             TGGGGCCTTSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTC-------SSHHHHHHHHTTTCC-
T ss_pred             CCcccccccccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCc-------CcHHHHHHHHhccCC-
Confidence            999765543    34899999999886 45899999999999999999999998531       112222222211111 


Q ss_pred             hHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          329 REALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                               ....+......+.+++.+||+.||.+|||++|+++
T Consensus       248 ---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  282 (290)
T 1t4h_A          248 ---------PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             ---------CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ---------ccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence                     11111122345889999999999999999999985


No 105
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00  E-value=8.7e-44  Score=322.79  Aligned_cols=243  Identities=23%  Similarity=0.426  Sum_probs=198.6

Q ss_pred             cccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLVY  180 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  180 (380)
                      ..+.||+|+||.||+|...++..||+|.+.....         ..+.+.+|++++++++||||+++++++.+ +..++||
T Consensus        17 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~   86 (279)
T 1qpc_A           17 LVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM---------SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT   86 (279)
T ss_dssp             EEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS---------CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred             heeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc---------cHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEE
Confidence            4578999999999999998888999999864211         13678899999999999999999999875 4589999


Q ss_pred             eecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCCC
Q 047245          181 DYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMPG  260 (380)
Q Consensus       181 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~  260 (380)
                      ||+++++|.+++...  ....+++..++.++.|++.||+|||   +.+++||||||+||++++++.+||+|||++.....
T Consensus        87 e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~  161 (279)
T 1qpc_A           87 EYMENGSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIED  161 (279)
T ss_dssp             ECCTTCBHHHHTTSH--HHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred             ecCCCCCHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCcccccccC
Confidence            999999999999742  2336899999999999999999999   89999999999999999999999999999976543


Q ss_pred             -------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhh
Q 047245          261 -------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREAL  332 (380)
Q Consensus       261 -------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  332 (380)
                             ...++..|+|||.+.+..++.++||||||+++|||++ |..||...        ...+.........      
T Consensus       162 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~--------~~~~~~~~~~~~~------  227 (279)
T 1qpc_A          162 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM--------TNPEVIQNLERGY------  227 (279)
T ss_dssp             SCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTC--------CHHHHHHHHHTTC------
T ss_pred             cccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCccc--------CHHHHHHHHhccc------
Confidence                   2236778999999998889999999999999999999 89998531        1112222211110      


Q ss_pred             chhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhcc
Q 047245          333 DRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQL  377 (380)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l  377 (380)
                      .     ...+......+.+++.+||+.||++|||++++++.|+++
T Consensus       228 ~-----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~  267 (279)
T 1qpc_A          228 R-----MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF  267 (279)
T ss_dssp             C-----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             C-----CCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHH
Confidence            0     011122345688999999999999999999999999876


No 106
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.4e-43  Score=322.74  Aligned_cols=247  Identities=23%  Similarity=0.323  Sum_probs=195.8

Q ss_pred             cccccCccCCeeEEEEEec-C---CcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-N---GLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRF  176 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~---g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  176 (380)
                      ..+.||+|+||.||+|... +   +..+|+|.+...       ......+.+.+|+.++++++||||+++++++.+.+..
T Consensus        25 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~-------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   97 (298)
T 3pls_A           25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI-------TEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGL   97 (298)
T ss_dssp             EEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTC-------CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSC
T ss_pred             cCceeccCCCceEEEEEEecCCCceeeeeeeecccc-------ccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCC
Confidence            3478999999999999863 2   237999998641       1234457889999999999999999999999766555


Q ss_pred             -EEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCc
Q 047245          177 -YLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLA  255 (380)
Q Consensus       177 -~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~  255 (380)
                       ++|+||+.+|+|.+++..   ....+++..++.++.|++.||+|||   +.+++||||||+||++++++.+||+|||++
T Consensus        98 ~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~  171 (298)
T 3pls_A           98 PHVLLPYMCHGDLLQFIRS---PQRNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLA  171 (298)
T ss_dssp             CEEEECCCTTCBHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSS
T ss_pred             cEEEEecccCCCHHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCc
Confidence             999999999999999973   3456899999999999999999999   889999999999999999999999999999


Q ss_pred             ccCCC----------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhh
Q 047245          256 KLMPG----------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHA  325 (380)
Q Consensus       256 ~~~~~----------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~  325 (380)
                      +....          ...+++.|+|||.+.+..++.++||||||+++|||++|..|+....    +   ..+........
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~----~---~~~~~~~~~~~  244 (298)
T 3pls_A          172 RDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHI----D---PFDLTHFLAQG  244 (298)
T ss_dssp             CTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS----C---GGGHHHHHHTT
T ss_pred             ccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccC----C---HHHHHHHhhcC
Confidence            75432          2346789999999999999999999999999999999666643211    0   01111111111


Q ss_pred             cchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          326 GEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                      .           ....+......+.+++.+||+.||.+|||++++++.|+++.
T Consensus       245 ~-----------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~  286 (298)
T 3pls_A          245 R-----------RLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIV  286 (298)
T ss_dssp             C-----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             C-----------CCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            0           01111223456889999999999999999999999998863


No 107
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00  E-value=1.7e-43  Score=321.44  Aligned_cols=237  Identities=24%  Similarity=0.429  Sum_probs=196.0

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEec-------
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPE-------  172 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-------  172 (380)
                      ..+.||+|+||.||++... +|+.||+|++....            ..+.+|++++++++||||+++++++..       
T Consensus        15 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   82 (284)
T 2a19_B           15 EIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPET   82 (284)
T ss_dssp             EEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS------------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---
T ss_pred             eeeeeccCCceEEEEEEEcCCCeEEEEEEecccc------------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccc
Confidence            4578999999999999985 78999999997521            345689999999999999999998854       


Q ss_pred             ---------CCeEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCC
Q 047245          173 ---------SSRFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDA  243 (380)
Q Consensus       173 ---------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~  243 (380)
                               ....++||||+++|+|.+++...  ....+++..++.++.|++.||+|||   +.+++||||||+||++++
T Consensus        83 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~  157 (284)
T 2a19_B           83 SSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR--RGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVD  157 (284)
T ss_dssp             ------CCEEEEEEEEECCCCSCBHHHHHHHG--GGSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEE
T ss_pred             ccccccccCcceEEEEEeccCCCCHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcC
Confidence                     34589999999999999999752  2457999999999999999999999   889999999999999999


Q ss_pred             CCceEEeccCCcccCCC-----CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHH
Q 047245          244 EFTPRLADFGLAKLMPG-----SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRW  318 (380)
Q Consensus       244 ~~~~kl~Dfgl~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~  318 (380)
                      ++.+||+|||++.....     ...+++.|+|||.+.+..++.++||||||+++|||++|..|+...          ..+
T Consensus       158 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----------~~~  227 (284)
T 2a19_B          158 TKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET----------SKF  227 (284)
T ss_dssp             TTEEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH----------HHH
T ss_pred             CCCEEECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH----------HHH
Confidence            99999999999876543     235899999999999999999999999999999999999886321          011


Q ss_pred             HHHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          319 LRHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                      ....          .......    .....+.+++.+||+.||.+|||+.|+++.|+.++
T Consensus       228 ~~~~----------~~~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~  273 (284)
T 2a19_B          228 FTDL----------RDGIISD----IFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK  273 (284)
T ss_dssp             HHHH----------HTTCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred             HHHh----------hcccccc----cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence            1111          1111111    12344778999999999999999999999998775


No 108
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00  E-value=7.1e-43  Score=330.20  Aligned_cols=242  Identities=23%  Similarity=0.342  Sum_probs=195.0

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++.. .+|+.||+|++.....     ......+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        19 i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~-----~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv   93 (384)
T 4fr4_A           19 ILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKC-----VERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV   93 (384)
T ss_dssp             EEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             EEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhc-----ccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence            457899999999999986 4588999999965211     1122346788999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||+++|+|.+++..    ...+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||+++...
T Consensus        94 ~e~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~  166 (384)
T 4fr4_A           94 VDLLLGGDLRYHLQQ----NVHFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLP  166 (384)
T ss_dssp             ECCCTTEEHHHHHHT----TCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeeecc
Confidence            999999999999874    446999999999999999999999   8999999999999999999999999999998654


Q ss_pred             C-----CCcCCCcccCcccccC---CCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHh
Q 047245          260 G-----SLIATSAYSAPECFQN---RSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREA  331 (380)
Q Consensus       260 ~-----~~~~~~~y~aPE~~~~---~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  331 (380)
                      .     ...||+.|+|||.+.+   ..++.++||||||+++|||++|..||...     ................     
T Consensus       167 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~-----~~~~~~~~~~~~~~~~-----  236 (384)
T 4fr4_A          167 RETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIR-----SSTSSKEIVHTFETTV-----  236 (384)
T ss_dssp             TTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCC-----TTSCHHHHHHHHHHCC-----
T ss_pred             CCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCC-----CCccHHHHHHHHhhcc-----
Confidence            3     3459999999999974   45899999999999999999999998631     1112222222211110     


Q ss_pred             hchhccCCcccHHHHHHHHHHHHHcccCCCCCCCC-HHhHH
Q 047245          332 LDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPS-SDELV  371 (380)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs-~~evl  371 (380)
                             ...+......+.+++.+||+.||.+||+ +++++
T Consensus       237 -------~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~  270 (384)
T 4fr4_A          237 -------VTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQ  270 (384)
T ss_dssp             -------CCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHH
T ss_pred             -------cCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHH
Confidence                   1112233456889999999999999998 66654


No 109
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00  E-value=6.1e-44  Score=331.21  Aligned_cols=245  Identities=27%  Similarity=0.387  Sum_probs=191.9

Q ss_pred             cccccCccCCeeEEEEEe-cCCcE----EEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCe
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLT----VAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSR  175 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~----vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  175 (380)
                      ..+.||+|+||.||+|.. .+|..    ||+|.+......       ...+.+.+|+.++++++||||+++++++.+ +.
T Consensus        17 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~-------~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~   88 (325)
T 3kex_A           17 KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR-------QSFQAVTDHMLAIGSLDHAHIVRLLGLCPG-SS   88 (325)
T ss_dssp             EEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSC-------SCBCSCCHHHHHHHTCCCTTBCCEEEEECB-SS
T ss_pred             eeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccH-------HHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-Cc
Confidence            346899999999999986 34554    777776532211       112456789999999999999999999864 56


Q ss_pred             EEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCc
Q 047245          176 FYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLA  255 (380)
Q Consensus       176 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~  255 (380)
                      .++|+||+++|+|.+++..   ....+++..++.++.|++.||+|||   +.+++||||||+|||++.++.+||+|||++
T Consensus        89 ~~~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a  162 (325)
T 3kex_A           89 LQLVTQYLPLGSLLDHVRQ---HRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVA  162 (325)
T ss_dssp             EEEEEECCTTCBSHHHHHS---SGGGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGG
T ss_pred             cEEEEEeCCCCCHHHHHHH---ccccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCcc
Confidence            8999999999999999873   2346889999999999999999999   889999999999999999999999999999


Q ss_pred             ccCCCC--------CcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhccCCCCHHHHHHHHHhhc
Q 047245          256 KLMPGS--------LIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEAASGGSLGRWLRHLQHAG  326 (380)
Q Consensus       256 ~~~~~~--------~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~l~~~~~~~~~~~  326 (380)
                      +.....        ..++..|+|||.+.+..++.++||||||+++|||++ |..||....        ............
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--------~~~~~~~~~~~~  234 (325)
T 3kex_A          163 DLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLR--------LAEVPDLLEKGE  234 (325)
T ss_dssp             GGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC--------TTHHHHHHHTTC
T ss_pred             cccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccC--------HHHHHHHHHcCC
Confidence            865422        236778999999999999999999999999999999 999986410        011111111110


Q ss_pred             chhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          327 EAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                      .           ...+......+.+++.+||+.||.+|||++|+++.|+++.
T Consensus       235 ~-----------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~  275 (325)
T 3kex_A          235 R-----------LAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMA  275 (325)
T ss_dssp             B-----------CCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHT
T ss_pred             C-----------CCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            0           0111122334778999999999999999999999998764


No 110
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00  E-value=3.9e-43  Score=323.90  Aligned_cols=250  Identities=25%  Similarity=0.351  Sum_probs=193.1

Q ss_pred             cccccCccCCeeEEEEEec----CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCC--
Q 047245          101 ENRLLGSSPDGKYYRTVLD----NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESS--  174 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--  174 (380)
                      ..+.||+|+||.||+|...    ++..||+|.+....      ......+.+.+|+.++++++||||+++++++.+.+  
T Consensus        38 ~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~  111 (313)
T 3brb_A           38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDN------SSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ  111 (313)
T ss_dssp             EEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---C------CCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred             eccceeecCCeEEEEEEEeccCCceeEEEEEEEeccc------cchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence            5578999999999999863    34589999987522      12344577899999999999999999999997755  


Q ss_pred             ---eEEEEEeecCCCCHHHHHHHhh--hcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEE
Q 047245          175 ---RFYLVYDYLQTGSLEDAMDRIR--ENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRL  249 (380)
Q Consensus       175 ---~~~lv~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl  249 (380)
                         ..++|+||+++|+|.+++....  .....+++..++.++.|++.||+|||   +.+++||||||+||+++.++.+||
T Consensus       112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kl  188 (313)
T 3brb_A          112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCV  188 (313)
T ss_dssp             ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTTSCEEE
T ss_pred             CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEE
Confidence               3599999999999999986432  23456999999999999999999999   999999999999999999999999


Q ss_pred             eccCCcccCCC--------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhccCCCCHHHHHH
Q 047245          250 ADFGLAKLMPG--------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEAASGGSLGRWLR  320 (380)
Q Consensus       250 ~Dfgl~~~~~~--------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~l~~~~~  320 (380)
                      +|||+++....        ...+++.|+|||.+.+..++.++||||||+++|||++ |..||.....        .....
T Consensus       189 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--------~~~~~  260 (313)
T 3brb_A          189 ADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN--------HEMYD  260 (313)
T ss_dssp             CSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG--------GGHHH
T ss_pred             eecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCH--------HHHHH
Confidence            99999976532        1236778999999999999999999999999999999 8888753110        11111


Q ss_pred             HHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          321 HLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                      ......           ....+......+.+++.+||+.||.+|||+.++++.|+++.
T Consensus       261 ~~~~~~-----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~  307 (313)
T 3brb_A          261 YLLHGH-----------RLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLL  307 (313)
T ss_dssp             HHHTTC-----------CCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHcCC-----------CCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            111110           01112234456889999999999999999999999998863


No 111
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00  E-value=4.6e-43  Score=325.58  Aligned_cols=241  Identities=22%  Similarity=0.286  Sum_probs=188.0

Q ss_pred             cccccCccCCeeEEEEEe----cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeE
Q 047245          101 ENRLLGSSPDGKYYRTVL----DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRF  176 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~----~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  176 (380)
                      ..+.||+|+||.||++..    .+|+.||+|++......    ........+.+|+.++++++||||+++++++.+.+..
T Consensus        21 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   96 (327)
T 3a62_A           21 LLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIV----RNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL   96 (327)
T ss_dssp             EEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC------------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred             EEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhh----hhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence            457899999999999987    57899999999753211    1122345678899999999999999999999999999


Q ss_pred             EEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcc
Q 047245          177 YLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAK  256 (380)
Q Consensus       177 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~  256 (380)
                      ++||||+++|+|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+|||++.++.+||+|||+++
T Consensus        97 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~  169 (327)
T 3a62_A           97 YLILEYLSGGELFMQLER----EGIFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCK  169 (327)
T ss_dssp             EEEEECCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred             EEEEeCCCCCcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCccc
Confidence            999999999999999974    346889999999999999999999   8899999999999999999999999999987


Q ss_pred             cCC------CCCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhH
Q 047245          257 LMP------GSLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEARE  330 (380)
Q Consensus       257 ~~~------~~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  330 (380)
                      ...      ....||+.|+|||.+.+..++.++||||||+++|||++|..||...        ............     
T Consensus       170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~--------~~~~~~~~i~~~-----  236 (327)
T 3a62_A          170 ESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGE--------NRKKTIDKILKC-----  236 (327)
T ss_dssp             ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCS--------SHHHHHHHHHHT-----
T ss_pred             ccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCC--------CHHHHHHHHHhC-----
Confidence            542      2345899999999999999999999999999999999999998641        111222222111     


Q ss_pred             hhchhccCCcccHHHHHHHHHHHHHcccCCCCCCC-----CHHhHHH
Q 047245          331 ALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRP-----SSDELVP  372 (380)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RP-----s~~evl~  372 (380)
                          ..   ..+......+.+++.+||+.||++||     ++.|+++
T Consensus       237 ----~~---~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~  276 (327)
T 3a62_A          237 ----KL---NLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA  276 (327)
T ss_dssp             ----CC---CCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred             ----CC---CCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence                00   11122345678999999999999999     6667654


No 112
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00  E-value=1e-42  Score=329.96  Aligned_cols=242  Identities=21%  Similarity=0.299  Sum_probs=196.6

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++... +|+.+|+|.+...        .......+.+|+.++++++||||+++++++.+....++|
T Consensus        55 i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~--------~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv  126 (387)
T 1kob_A           55 ILEELGSGAFGVVHRCVEKATGRVFVAKFINTP--------YPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLI  126 (387)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------SHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEE
T ss_pred             EEEEEecCCCEEEEEEEECCCCCEEEEEEeccc--------chhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEE
Confidence            4568999999999999874 6889999998651        122346788999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCC--CCceEEeccCCccc
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDA--EFTPRLADFGLAKL  257 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~--~~~~kl~Dfgl~~~  257 (380)
                      |||+++|+|.+++..   ....+++..+..++.|++.||+|||   +.+++||||||+|||++.  ++.+||+|||+++.
T Consensus       127 ~E~~~gg~L~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~  200 (387)
T 1kob_A          127 LEFLSGGELFDRIAA---EDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATK  200 (387)
T ss_dssp             EECCCCCBHHHHTTC---TTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEE
T ss_pred             EEcCCCCcHHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEeccccee
Confidence            999999999999863   2346899999999999999999999   899999999999999974  47899999999987


Q ss_pred             CCCC-----CcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhh
Q 047245          258 MPGS-----LIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREAL  332 (380)
Q Consensus       258 ~~~~-----~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  332 (380)
                      ....     ..+|+.|+|||.+.+..++.++||||||+++|||++|..||...        ..............     
T Consensus       201 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~--------~~~~~~~~i~~~~~-----  267 (387)
T 1kob_A          201 LNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGE--------DDLETLQNVKRCDW-----  267 (387)
T ss_dssp             CCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS--------SHHHHHHHHHHCCC-----
T ss_pred             cCCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCC--------CHHHHHHHHHhCCC-----
Confidence            6543     35899999999999999999999999999999999999998641        11111222111110     


Q ss_pred             chhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          333 DRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                        ... ..........+.+++.+||+.||++|||+.|+++
T Consensus       268 --~~~-~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  304 (387)
T 1kob_A          268 --EFD-EDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE  304 (387)
T ss_dssp             --CCC-SSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             --CCC-ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence              000 1111223456889999999999999999999985


No 113
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00  E-value=1.2e-42  Score=316.64  Aligned_cols=245  Identities=26%  Similarity=0.367  Sum_probs=194.7

Q ss_pred             ccccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEE
Q 047245          100 NENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYL  178 (380)
Q Consensus       100 ~~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  178 (380)
                      ...+.||+|+||.||++.. .+|..+|+|++......       ...+.+.+|++++++++||||+++++++.+.+..++
T Consensus        25 ~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-------~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l   97 (285)
T 3is5_A           25 IFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQ-------VPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYI   97 (285)
T ss_dssp             EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCC-------SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             eecceeccCCCeEEEEEEEccCCceEEEEEeeccccc-------hhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEE
Confidence            3567899999999999987 46889999999763221       123678899999999999999999999999999999


Q ss_pred             EEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEe---CCCCceEEeccCCc
Q 047245          179 VYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVML---DAEFTPRLADFGLA  255 (380)
Q Consensus       179 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill---~~~~~~kl~Dfgl~  255 (380)
                      ||||+++|+|.+++.........+++..++.++.|++.||+|||   +.+++||||||+||++   +.++.+||+|||++
T Consensus        98 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a  174 (285)
T 3is5_A           98 VMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLA  174 (285)
T ss_dssp             EECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCC
T ss_pred             EEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeecc
Confidence            99999999999999765555678999999999999999999999   8999999999999999   45688999999999


Q ss_pred             ccCCC-----CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhH
Q 047245          256 KLMPG-----SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEARE  330 (380)
Q Consensus       256 ~~~~~-----~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  330 (380)
                      .....     ...+++.|+|||.+. ..++.++||||||+++|||++|..||...        .............    
T Consensus       175 ~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~--------~~~~~~~~~~~~~----  241 (285)
T 3is5_A          175 ELFKSDEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGT--------SLEEVQQKATYKE----  241 (285)
T ss_dssp             CC----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHCC----
T ss_pred             eecCCcccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCC--------CHHHHHhhhccCC----
Confidence            76543     235899999999885 56899999999999999999999998641        1111111111110    


Q ss_pred             hhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          331 ALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                         +.....  .......+.+++.+||+.||++|||+.|+++
T Consensus       242 ---~~~~~~--~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          242 ---PNYAVE--CRPLTPQAVDLLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             ---CCCCC----CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             ---cccccc--cCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence               000000  0012345779999999999999999999985


No 114
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00  E-value=1.2e-42  Score=316.13  Aligned_cols=243  Identities=24%  Similarity=0.346  Sum_probs=196.8

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++.. .+|..||+|++....      ......+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        10 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v   83 (284)
T 3kk8_A           10 VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK------LSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV   83 (284)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG------CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhhhhcCcCCeEEEEEEEcCCCceEEEEEeeccc------CCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence            346899999999999987 468999999997532      2234457788999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCc---eEEeccCCcc
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFT---PRLADFGLAK  256 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~---~kl~Dfgl~~  256 (380)
                      |||+++|+|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+||+++.++.   +||+|||++.
T Consensus        84 ~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~  156 (284)
T 3kk8_A           84 FDLVTGGELFEDIVA----REFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI  156 (284)
T ss_dssp             ECCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred             EecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeE
Confidence            999999999998874    346899999999999999999999   899999999999999986655   9999999997


Q ss_pred             cCCC-----CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHh
Q 047245          257 LMPG-----SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREA  331 (380)
Q Consensus       257 ~~~~-----~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  331 (380)
                      ....     ...+++.|+|||.+.+..++.++||||||+++|+|++|..||...        ..............    
T Consensus       157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~--------~~~~~~~~~~~~~~----  224 (284)
T 3kk8_A          157 EVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE--------DQHRLYAQIKAGAY----  224 (284)
T ss_dssp             ECCSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHTCC----
T ss_pred             EcccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCC--------chhHHHHHHHhccc----
Confidence            6543     245899999999999999999999999999999999999998531        11122221111110    


Q ss_pred             hchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          332 LDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                       ..   ...........+.+++.+||+.||++|||++|+++
T Consensus       225 -~~---~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (284)
T 3kk8_A          225 -DY---PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK  261 (284)
T ss_dssp             -CC---CTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             -cC---CchhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence             00   00011123455789999999999999999999975


No 115
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00  E-value=1.4e-42  Score=315.02  Aligned_cols=240  Identities=22%  Similarity=0.396  Sum_probs=195.2

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++... ++..||+|++....     .........+.+|+.++++++||||+++++++.+.+..++|
T Consensus        13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   87 (279)
T 3fdn_A           13 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ-----LEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI   87 (279)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH-----HHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             EeeEEecCCCeEEEEEEEccCCcEEEEEEEeccc-----cchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence            3468999999999999864 57799999986521     11122346788999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||+++|+|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+||+++.++.+||+|||++....
T Consensus        88 ~e~~~~~~l~~~l~~----~~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~  160 (279)
T 3fdn_A           88 LEYAPLGTVYRELQK----LSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP  160 (279)
T ss_dssp             ECCCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC-
T ss_pred             EecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccCC
Confidence            999999999999974    346899999999999999999999   9999999999999999999999999999986554


Q ss_pred             C----CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhhchh
Q 047245          260 G----SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREALDRS  335 (380)
Q Consensus       260 ~----~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  335 (380)
                      .    ...+++.|+|||.+.+..++.++||||||+++|||++|..||...        ............       .. 
T Consensus       161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--------~~~~~~~~~~~~-------~~-  224 (279)
T 3fdn_A          161 SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN--------TYQETYKRISRV-------EF-  224 (279)
T ss_dssp             -------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCS--------SHHHHHHHHHHT-------CC-
T ss_pred             cccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCC--------cHHHHHHHHHhC-------CC-
Confidence            3    345899999999999999999999999999999999999998631        111111111111       00 


Q ss_pred             ccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          336 ILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       336 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                          ..+......+.+++.+||+.||.+|||++|+++
T Consensus       225 ----~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~  257 (279)
T 3fdn_A          225 ----TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE  257 (279)
T ss_dssp             ----CCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             ----CCCCcCCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence                111223455789999999999999999999985


No 116
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00  E-value=1.7e-43  Score=329.47  Aligned_cols=239  Identities=21%  Similarity=0.302  Sum_probs=195.1

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++.. .+|+.||+|++..................+.+|+.++++++||||+++++++.+.+..++|
T Consensus        28 ~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv  107 (335)
T 3dls_A           28 TMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLV  107 (335)
T ss_dssp             EEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             EEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEEEE
Confidence            457899999999999985 5789999999976432211101111234567899999999999999999999999999999


Q ss_pred             EeecCCC-CHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccC
Q 047245          180 YDYLQTG-SLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLM  258 (380)
Q Consensus       180 ~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~  258 (380)
                      |||+.+| +|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+|||++.++.+||+|||+++..
T Consensus       108 ~e~~~~g~~l~~~~~~----~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~  180 (335)
T 3dls_A          108 MEKHGSGLDLFAFIDR----HPRLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL  180 (335)
T ss_dssp             EECCTTSCBHHHHHHT----CCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEeCCCCccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEeecccceEC
Confidence            9999777 99999873    446999999999999999999999   889999999999999999999999999999866


Q ss_pred             CCC-----CcCCCcccCcccccCCCC-CCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhh
Q 047245          259 PGS-----LIATSAYSAPECFQNRSY-TDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREAL  332 (380)
Q Consensus       259 ~~~-----~~~~~~y~aPE~~~~~~~-~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  332 (380)
                      ...     ..||+.|+|||.+.+..+ +.++||||||+++|||++|..||.....                       ..
T Consensus       181 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----------------------~~  237 (335)
T 3dls_A          181 ERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE-----------------------TV  237 (335)
T ss_dssp             CTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG-----------------------GT
T ss_pred             CCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH-----------------------HH
Confidence            543     248999999999988877 7899999999999999999999864211                       01


Q ss_pred             chhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          333 DRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      .......   ......+.+++.+||+.||++|||++|+++
T Consensus       238 ~~~~~~~---~~~~~~l~~li~~~L~~dP~~Rps~~ell~  274 (335)
T 3dls_A          238 EAAIHPP---YLVSKELMSLVSGLLQPVPERRTTLEKLVT  274 (335)
T ss_dssp             TTCCCCS---SCCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hhccCCC---cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            1111111   113345789999999999999999999986


No 117
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00  E-value=3.1e-43  Score=322.19  Aligned_cols=246  Identities=24%  Similarity=0.340  Sum_probs=193.8

Q ss_pred             cccccCccCCeeEEEEEecC----CcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEe-cCCe
Q 047245          101 ENRLLGSSPDGKYYRTVLDN----GLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVP-ESSR  175 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~  175 (380)
                      ..+.||+|+||.||+|...+    +..+|+|.+...       ......+.+.+|+.++++++||||+++++++. ..+.
T Consensus        29 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~-------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  101 (298)
T 3f66_A           29 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-------TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGS  101 (298)
T ss_dssp             EEEEEEEETTEEEEEEEEC-----CEEEEEEEETTC-------CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSC
T ss_pred             hcceeeecCCceEEEEEEecCCCceeEEEEEecccC-------CCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCc
Confidence            45789999999999998632    235889988641       12344578899999999999999999999864 4567


Q ss_pred             EEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCc
Q 047245          176 FYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLA  255 (380)
Q Consensus       176 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~  255 (380)
                      .++||||+++|+|.+++..   ....+++..++.++.|++.||+|||   +.+++||||||+||++++++.+||+|||++
T Consensus       102 ~~~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a  175 (298)
T 3f66_A          102 PLVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLA  175 (298)
T ss_dssp             CEEEEECCTTCBHHHHHHC---TTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGG
T ss_pred             eEEEEeCCCCCCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECccccc
Confidence            8999999999999999963   3456899999999999999999999   899999999999999999999999999999


Q ss_pred             ccCCC----------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCC-CCCCchhhhccCCCCHHHHHHHHHh
Q 047245          256 KLMPG----------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGR-DPTAPFFAEAASGGSLGRWLRHLQH  324 (380)
Q Consensus       256 ~~~~~----------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~-~p~~~~~~~~~~~~~l~~~~~~~~~  324 (380)
                      +....          ...+|+.|+|||.+.+..++.++||||||+++|||++|. .||...     .......   ....
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-----~~~~~~~---~~~~  247 (298)
T 3f66_A          176 RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-----NTFDITV---YLLQ  247 (298)
T ss_dssp             CCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTS-----CTTTHHH---HHHT
T ss_pred             ccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccC-----CHHHHHH---HHhc
Confidence            76532          223677899999999999999999999999999999955 454321     1111111   1111


Q ss_pred             hcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          325 AGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                      ..       .    ...+......+.+++.+||+.||++|||++|+++.|+++.
T Consensus       248 ~~-------~----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~  290 (298)
T 3f66_A          248 GR-------R----LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF  290 (298)
T ss_dssp             TC-------C----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CC-------C----CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            10       0    0111223456889999999999999999999999999863


No 118
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00  E-value=2.1e-43  Score=320.12  Aligned_cols=247  Identities=24%  Similarity=0.371  Sum_probs=198.2

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEe--cCCeEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVP--ESSRFY  177 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~  177 (380)
                      ..+.||+|+||.||++... +|+.||+|.+....      ......+.+.+|+.++++++||||+++++++.  .....+
T Consensus        10 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   83 (279)
T 2w5a_A           10 VLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGS------MTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY   83 (279)
T ss_dssp             EEEEEEECSSSEEEEEEETTTCCEEEEEEEECTT------CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEE
T ss_pred             eehhccCCCCcEEEEEEECCCCcEEEEEEEEccc------CCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEE
Confidence            3468999999999999974 68999999997522      12344578999999999999999999999874  467899


Q ss_pred             EEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCC-----eEecCCCCCcEEeCCCCceEEecc
Q 047245          178 LVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQ-----ILHYNLKPTNVMLDAEFTPRLADF  252 (380)
Q Consensus       178 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~-----iiH~dlk~~Nill~~~~~~kl~Df  252 (380)
                      +||||+++|+|.+++.........+++..++.++.|++.||+|||   +.+     ++||||||+||+++.++.+||+||
T Consensus        84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~df  160 (279)
T 2w5a_A           84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDF  160 (279)
T ss_dssp             EEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEEECCC
T ss_pred             EEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEEEecC
Confidence            999999999999999875555566999999999999999999999   666     999999999999999999999999


Q ss_pred             CCcccCCCC------CcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhc
Q 047245          253 GLAKLMPGS------LIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAG  326 (380)
Q Consensus       253 gl~~~~~~~------~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~  326 (380)
                      |+++.....      ..+++.|+|||.+.+..++.++||||||+++|||++|..||...        ...+....... +
T Consensus       161 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--------~~~~~~~~i~~-~  231 (279)
T 2w5a_A          161 GLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF--------SQKELAGKIRE-G  231 (279)
T ss_dssp             CHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHH-T
T ss_pred             chheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCccc--------CHHHHHHHHhh-c
Confidence            999876543      24889999999999999999999999999999999999998642        11111111111 1


Q ss_pred             chhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHh
Q 047245          327 EAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLT  375 (380)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~  375 (380)
                      ..          ...+......+.+++.+||+.||++|||++|+++.+.
T Consensus       232 ~~----------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~  270 (279)
T 2w5a_A          232 KF----------RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPL  270 (279)
T ss_dssp             CC----------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred             cc----------ccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence            10          0111223456889999999999999999999997654


No 119
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00  E-value=7.2e-44  Score=331.65  Aligned_cols=249  Identities=21%  Similarity=0.334  Sum_probs=199.5

Q ss_pred             cccccCccCCeeEEEEEecC------CcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcC-CCCCcceeeEEEecC
Q 047245          101 ENRLLGSSPDGKYYRTVLDN------GLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASL-RHRNLMSLRAYVPES  173 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~~------g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~  173 (380)
                      ..+.||+|+||.||++....      +..||+|.+....       .....+.+.+|+.+++++ +||||+++++++.+.
T Consensus        50 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~  122 (333)
T 2i1m_A           50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA-------HADEKEALMSELKIMSHLGQHENIVNLLGACTHG  122 (333)
T ss_dssp             EEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC-------CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             eeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc-------ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecC
Confidence            56789999999999998632      2479999986521       233457889999999999 899999999999999


Q ss_pred             CeEEEEEeecCCCCHHHHHHHhhhc----------ccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCC
Q 047245          174 SRFYLVYDYLQTGSLEDAMDRIREN----------QLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDA  243 (380)
Q Consensus       174 ~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~  243 (380)
                      +..++||||+++|+|.+++......          ...+++..++.++.|++.||+|||   +.+++||||||+||+++.
T Consensus       123 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~  199 (333)
T 2i1m_A          123 GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTN  199 (333)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCEEEG
T ss_pred             CceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEEECC
Confidence            9999999999999999999754321          346899999999999999999999   889999999999999999


Q ss_pred             CCceEEeccCCcccCCC--------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhccCCCC
Q 047245          244 EFTPRLADFGLAKLMPG--------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEAASGGS  314 (380)
Q Consensus       244 ~~~~kl~Dfgl~~~~~~--------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~  314 (380)
                      ++.+||+|||+++....        ...+++.|+|||.+.+..++.++||||||+++|||++ |..||....    .   
T Consensus       200 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~----~---  272 (333)
T 2i1m_A          200 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGIL----V---  272 (333)
T ss_dssp             GGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC----S---
T ss_pred             CCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccc----h---
Confidence            99999999999975432        2236778999999999999999999999999999999 889985310    0   


Q ss_pred             HHHHHHHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhcc
Q 047245          315 LGRWLRHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQL  377 (380)
Q Consensus       315 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l  377 (380)
                       ..........+         .. ...+......+.+++.+||+.||.+|||+.|+++.|+++
T Consensus       273 -~~~~~~~~~~~---------~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~  324 (333)
T 2i1m_A          273 -NSKFYKLVKDG---------YQ-MAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQ  324 (333)
T ss_dssp             -SHHHHHHHHHT---------CC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -hHHHHHHHhcC---------CC-CCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHH
Confidence             01111111111         00 011122345678999999999999999999999999876


No 120
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00  E-value=1.4e-42  Score=326.67  Aligned_cols=242  Identities=23%  Similarity=0.285  Sum_probs=188.1

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++... +|+.||+|++......         .+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        24 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---------~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv   94 (361)
T 3uc3_A           24 FVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI---------DENVQREIINHRSLRHPNIVRFKEVILTPTHLAII   94 (361)
T ss_dssp             EEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS---------CHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             EEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc---------cHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEE
Confidence            4578999999999999974 7899999999752211         15678999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCc--eEEeccCCccc
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFT--PRLADFGLAKL  257 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~--~kl~Dfgl~~~  257 (380)
                      |||+++|+|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+|||++.++.  +||+|||+++.
T Consensus        95 ~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~  167 (361)
T 3uc3_A           95 MEYASGGELYERICN----AGRFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKS  167 (361)
T ss_dssp             EECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC--
T ss_pred             EEeCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCcccc
Confidence            999999999999874    346999999999999999999999   899999999999999987765  99999999874


Q ss_pred             CC-----CCCcCCCcccCcccccCCCCCCc-chhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHh
Q 047245          258 MP-----GSLIATSAYSAPECFQNRSYTDK-SDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREA  331 (380)
Q Consensus       258 ~~-----~~~~~~~~y~aPE~~~~~~~~~~-sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  331 (380)
                      ..     ....||+.|+|||.+.+..++.+ +||||||+++|||++|+.||...    ..................    
T Consensus       168 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~----~~~~~~~~~~~~~~~~~~----  239 (361)
T 3uc3_A          168 SVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDP----EEPRDYRKTIQRILSVKY----  239 (361)
T ss_dssp             -------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC--------CCCHHHHHHHHHTTCC----
T ss_pred             ccccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCC----ccHHHHHHHHHHHhcCCC----
Confidence            32     23458999999999988887665 89999999999999999998631    111222222222221110    


Q ss_pred             hchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          332 LDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                         ..   .........+.+++.+||+.||++|||+.|+++
T Consensus       240 ---~~---~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~  274 (361)
T 3uc3_A          240 ---SI---PDDIRISPECCHLISRIFVADPATRISIPEIKT  274 (361)
T ss_dssp             ---CC---CTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             ---CC---CCcCCCCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence               00   000113455789999999999999999999975


No 121
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00  E-value=3.8e-42  Score=318.07  Aligned_cols=250  Identities=24%  Similarity=0.353  Sum_probs=185.4

Q ss_pred             ccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEEE
Q 047245          102 NRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLVY  180 (380)
Q Consensus       102 ~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  180 (380)
                      .+.||+|+||.||+|.. .+|+.||+|++......       .....+.+|+.++++++||||+++++++.+.+..++||
T Consensus        10 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-------~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   82 (317)
T 2pmi_A           10 LEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEE-------GTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF   82 (317)
T ss_dssp             ---------CEEEEEECSSSCCEEEEEEEECCSTT-------CSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred             eeEECCCCCEEEEEEEECCCCcEEEEEEeeccccc-------ccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence            46799999999999986 46899999999753211       11256778999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHHHhhh--cccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccC
Q 047245          181 DYLQTGSLEDAMDRIRE--NQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLM  258 (380)
Q Consensus       181 e~~~~gsL~~~l~~~~~--~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~  258 (380)
                      ||++ |+|.+++.....  ....+++..+..++.|++.||+|||   +.+++||||||+|||++.++.+||+|||+++..
T Consensus        83 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~  158 (317)
T 2pmi_A           83 EFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAF  158 (317)
T ss_dssp             ECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred             EecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccceec
Confidence            9998 599999875332  1245899999999999999999999   899999999999999999999999999999765


Q ss_pred             CC------CCcCCCcccCcccccC-CCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhc-----
Q 047245          259 PG------SLIATSAYSAPECFQN-RSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAG-----  326 (380)
Q Consensus       259 ~~------~~~~~~~y~aPE~~~~-~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~-----  326 (380)
                      ..      ...+|+.|+|||.+.+ ..++.++||||||+++|||++|+.||.......    .+.. +.......     
T Consensus       159 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~----~~~~-i~~~~~~~~~~~~  233 (317)
T 2pmi_A          159 GIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE----QLKL-IFDIMGTPNESLW  233 (317)
T ss_dssp             TSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHH-HHHHHCSCCTTTC
T ss_pred             CCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH----HHHH-HHHHhCCCChhHh
Confidence            32      2358999999999976 468999999999999999999999986421110    0000 10100000     


Q ss_pred             -------------------chhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          327 -------------------EAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       327 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                                         ...+.+.+..     .......+.+++.+||+.||++|||++|+++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~  293 (317)
T 2pmi_A          234 PSVTKLPKYNPNIQQRPPRDLRQVLQPHT-----KEPLDGNLMDFLHGLLQLNPDMRLSAKQALH  293 (317)
T ss_dssp             GGGGGCTTCCTTCCCCCCCCSHHHHGGGC-----SSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             hhhhhhhhcccccccccchhHHHhhcccc-----cccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence                               0000011100     0112346889999999999999999999874


No 122
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00  E-value=3.4e-43  Score=328.61  Aligned_cols=240  Identities=22%  Similarity=0.317  Sum_probs=191.1

Q ss_pred             cccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCC--CCcceeeEEEecCCeEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRH--RNLMSLRAYVPESSRFYL  178 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~l  178 (380)
                      ..+.||+|+||.||++...+++.||+|++....      ........+.+|+.++.+++|  |||+++++++.+.+..++
T Consensus        13 i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l   86 (343)
T 3dbq_A           13 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE------ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM   86 (343)
T ss_dssp             EEEEESCCSSEEEEEEECTTSCEEEEEEEECTT------CCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             EEEEEecCCCeEEEEEEeCCCCEEEEEEeeccc------cchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEE
Confidence            356899999999999999889999999997522      233455788999999999976  999999999999999999


Q ss_pred             EEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccC
Q 047245          179 VYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLM  258 (380)
Q Consensus       179 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~  258 (380)
                      ||| +.+|+|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+|||++ ++.+||+|||+++..
T Consensus        87 v~e-~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~  157 (343)
T 3dbq_A           87 VME-CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQM  157 (343)
T ss_dssp             EEC-CCSEEHHHHHHH----SCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC
T ss_pred             EEe-CCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeeccccccc
Confidence            999 568899999974    457899999999999999999999   88999999999999997 578999999999865


Q ss_pred             CC--------CCcCCCcccCcccccC-----------CCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHH
Q 047245          259 PG--------SLIATSAYSAPECFQN-----------RSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWL  319 (380)
Q Consensus       259 ~~--------~~~~~~~y~aPE~~~~-----------~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~  319 (380)
                      ..        ...||+.|+|||.+.+           ..++.++||||||+++|||++|+.||....       ......
T Consensus       158 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-------~~~~~~  230 (343)
T 3dbq_A          158 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-------NQISKL  230 (343)
T ss_dssp             ------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC-------SHHHHH
T ss_pred             CcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh-------hHHHHH
Confidence            42        2358999999999864           678899999999999999999999986311       111111


Q ss_pred             HHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          320 RHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                               ...+++.... ..+......+.+++.+||+.||.+|||+.|+++
T Consensus       231 ---------~~~~~~~~~~-~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~  273 (343)
T 3dbq_A          231 ---------HAIIDPNHEI-EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  273 (343)
T ss_dssp             ---------HHHHCTTSCC-CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ---------HHHhcCCccc-CCcccCCHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence                     1112211111 111122345789999999999999999999974


No 123
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00  E-value=2.5e-43  Score=326.45  Aligned_cols=249  Identities=20%  Similarity=0.362  Sum_probs=202.0

Q ss_pred             ccccccCccCCeeEEEEEec------CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecC
Q 047245          100 NENRLLGSSPDGKYYRTVLD------NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPES  173 (380)
Q Consensus       100 ~~~~~lg~G~~g~vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  173 (380)
                      ...+.||+|+||.||+|...      ++..||+|.+...       ........+.+|+.++++++||||+++++++.+.
T Consensus        28 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~-------~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~  100 (322)
T 1p4o_A           28 TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-------ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG  100 (322)
T ss_dssp             EEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTT-------SCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSS
T ss_pred             eeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccc-------cCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccC
Confidence            35678999999999999864      3678999998641       1223456789999999999999999999999999


Q ss_pred             CeEEEEEeecCCCCHHHHHHHhhhc------ccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCce
Q 047245          174 SRFYLVYDYLQTGSLEDAMDRIREN------QLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTP  247 (380)
Q Consensus       174 ~~~~lv~e~~~~gsL~~~l~~~~~~------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~  247 (380)
                      +..++||||+++|+|.+++......      ...+++..++.++.|++.||+|||   +.+++||||||+||+++.++.+
T Consensus       101 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NIli~~~~~~  177 (322)
T 1p4o_A          101 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTV  177 (322)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTTCCE
T ss_pred             CccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceEEEcCCCeE
Confidence            9999999999999999999864321      245789999999999999999999   8899999999999999999999


Q ss_pred             EEeccCCcccCCC--------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhccCCCCHHHH
Q 047245          248 RLADFGLAKLMPG--------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEAASGGSLGRW  318 (380)
Q Consensus       248 kl~Dfgl~~~~~~--------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~l~~~  318 (380)
                      ||+|||+++....        ...+++.|+|||.+.+..++.++||||||+++|||++ |..||...        .....
T Consensus       178 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~--------~~~~~  249 (322)
T 1p4o_A          178 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL--------SNEQV  249 (322)
T ss_dssp             EECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS--------CHHHH
T ss_pred             EECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccC--------CHHHH
Confidence            9999999975432        2236788999999999999999999999999999999 88887531        11222


Q ss_pred             HHHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhcc
Q 047245          319 LRHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQL  377 (380)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l  377 (380)
                      ........         .  ...+......+.+++.+||+.||++|||+.|+++.|+++
T Consensus       250 ~~~~~~~~---------~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~  297 (322)
T 1p4o_A          250 LRFVMEGG---------L--LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE  297 (322)
T ss_dssp             HHHHHTTC---------C--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred             HHHHHcCC---------c--CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHh
Confidence            22221111         0  011123345688999999999999999999999999876


No 124
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=5.9e-45  Score=334.13  Aligned_cols=254  Identities=24%  Similarity=0.343  Sum_probs=182.2

Q ss_pred             cccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHc--CCCCCcceeeEEEecCC----
Q 047245          101 ENRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLAS--LRHRNLMSLRAYVPESS----  174 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----  174 (380)
                      ..+.||+|+||.||+|... |+.||||++...           ....+.+|.+++..  ++||||+++++++....    
T Consensus         7 ~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-----------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~   74 (303)
T 3gxj_A            7 LQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR-----------EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT   74 (303)
T ss_dssp             CCEEEEECSSSEEEEC-CT-TSCEEEEECC-T-----------THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSE
T ss_pred             ehhhccCCCCeEEEEEEEc-CcceEEEEeccc-----------chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccc
Confidence            4578999999999999874 899999998641           12456678888887  79999999999998776    


Q ss_pred             eEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcC-----CCCeEecCCCCCcEEeCCCCceEE
Q 047245          175 RFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTC-----NPQILHYNLKPTNVMLDAEFTPRL  249 (380)
Q Consensus       175 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-----~~~iiH~dlk~~Nill~~~~~~kl  249 (380)
                      ..++||||+++|+|.++++.     ..+++..++.++.|++.||+|||...     +.+++||||||+|||++.++.+||
T Consensus        75 ~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl  149 (303)
T 3gxj_A           75 QLWLVSDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI  149 (303)
T ss_dssp             EEEEEEECCTTCCHHHHHHH-----CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-B
T ss_pred             eeEEEEeccCCCCHHHHHhc-----cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEE
Confidence            78999999999999999963     35788889999999999999999432     678999999999999999999999


Q ss_pred             eccCCcccCCC----------CCcCCCcccCcccccCC------CCCCcchhhHHHHHHHHHHhC----------CCCCC
Q 047245          250 ADFGLAKLMPG----------SLIATSAYSAPECFQNR------SYTDKSDIFSFGMILAVLLTG----------RDPTA  303 (380)
Q Consensus       250 ~Dfgl~~~~~~----------~~~~~~~y~aPE~~~~~------~~~~~sDv~s~Gvil~el~tg----------~~p~~  303 (380)
                      +|||+++....          ...||+.|+|||.+.+.      .++.++||||||+++|||++|          ..||.
T Consensus       150 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~  229 (303)
T 3gxj_A          150 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYY  229 (303)
T ss_dssp             CCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTT
T ss_pred             eecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeecccc
Confidence            99999965432          12589999999999776      445689999999999999999          56654


Q ss_pred             chhhhccCCCCHHHHHHHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhcccC
Q 047245          304 PFFAEAASGGSLGRWLRHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLHS  379 (380)
Q Consensus       304 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~~  379 (380)
                      ..........   ........ .    ...+.........+....+.+++.+||+.||.+|||++|+++.|+++..
T Consensus       230 ~~~~~~~~~~---~~~~~~~~-~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~  297 (303)
T 3gxj_A          230 DLVPSDPSVE---EMRKVVCE-Q----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ  297 (303)
T ss_dssp             TTCC-CCCCC----CHHHHTT-S----CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CC
T ss_pred             ccCCCCccHH---HHHHHHHH-h----hcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhh
Confidence            3211111111   11111100 0    0111111111223567789999999999999999999999999998853


No 125
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00  E-value=3.2e-43  Score=319.53  Aligned_cols=245  Identities=21%  Similarity=0.342  Sum_probs=195.9

Q ss_pred             cccccCccCCeeEEEEEecC----CcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeE
Q 047245          101 ENRLLGSSPDGKYYRTVLDN----GLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRF  176 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  176 (380)
                      ..+.||+|+||.||+|...+    +..||+|.+...       ......+.+.+|+.++++++||||+++++++.++ ..
T Consensus        16 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~-------~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~   87 (281)
T 3cc6_A           16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKD-------CTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PT   87 (281)
T ss_dssp             EEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTT-------SCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SC
T ss_pred             EEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccc-------cCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CC
Confidence            45789999999999998643    336999998642       1233457899999999999999999999998754 56


Q ss_pred             EEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcc
Q 047245          177 YLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAK  256 (380)
Q Consensus       177 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~  256 (380)
                      ++||||+++++|.+++..   ....+++..+..++.|++.||+|||   +.+++||||||+||+++.++.+||+|||++.
T Consensus        88 ~~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~  161 (281)
T 3cc6_A           88 WIIMELYPYGELGHYLER---NKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSR  161 (281)
T ss_dssp             EEEEECCTTCBHHHHHHH---HTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGG
T ss_pred             EEEEecCCCCCHHHHHHh---ccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCc
Confidence            899999999999999974   2446899999999999999999999   8999999999999999999999999999998


Q ss_pred             cCCCC-------CcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhccCCCCHHHHHHHHHhhcch
Q 047245          257 LMPGS-------LIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEAASGGSLGRWLRHLQHAGEA  328 (380)
Q Consensus       257 ~~~~~-------~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~  328 (380)
                      .....       ..+++.|+|||.+.+..++.++||||||+++|||++ |+.||......     .   .......... 
T Consensus       162 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~-----~---~~~~~~~~~~-  232 (281)
T 3cc6_A          162 YIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK-----D---VIGVLEKGDR-  232 (281)
T ss_dssp             CC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG-----G---HHHHHHHTCC-
T ss_pred             ccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH-----H---HHHHHhcCCC-
Confidence            65432       246778999999998899999999999999999998 99998531110     1   1111111100 


Q ss_pred             hHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          329 REALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                                ...+......+.+++.+||+.||++|||+.|+++.|+++.
T Consensus       233 ----------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~  272 (281)
T 3cc6_A          233 ----------LPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVY  272 (281)
T ss_dssp             ----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ----------CCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHH
Confidence                      0111223455889999999999999999999999998864


No 126
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00  E-value=9.1e-43  Score=318.32  Aligned_cols=251  Identities=22%  Similarity=0.341  Sum_probs=192.8

Q ss_pred             ccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEEE
Q 047245          102 NRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLVY  180 (380)
Q Consensus       102 ~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  180 (380)
                      .+.||+|+||.||++... +|+.||+|++.....      .......+.+|+.++++++||||+++++++.+.+..++||
T Consensus         7 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   80 (292)
T 3o0g_A            7 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD------DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF   80 (292)
T ss_dssp             EEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS------STTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             eeEecCCCCeEEEEEEECCCCceEEEEeeeccCC------cCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEE
Confidence            467999999999999974 689999999975322      2233467889999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCCC
Q 047245          181 DYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMPG  260 (380)
Q Consensus       181 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~  260 (380)
                      ||+++ ++.+++..   ....+++..+..++.|++.||+|||   +.+++||||||+||+++.++.+||+|||+++....
T Consensus        81 e~~~~-~l~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~  153 (292)
T 3o0g_A           81 EFCDQ-DLKKYFDS---CNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGI  153 (292)
T ss_dssp             ECCSE-EHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCS
T ss_pred             ecCCC-CHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecCC
Confidence            99975 67666653   2457999999999999999999999   88999999999999999999999999999976542


Q ss_pred             ------CCcCCCcccCcccccCCC-CCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHh---hcchhH
Q 047245          261 ------SLIATSAYSAPECFQNRS-YTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQH---AGEARE  330 (380)
Q Consensus       261 ------~~~~~~~y~aPE~~~~~~-~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~  330 (380)
                            ...+|+.|+|||.+.+.. ++.++||||||+++|||++|..|+...       ....+.......   ......
T Consensus       154 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~-------~~~~~~~~~i~~~~~~~~~~~  226 (292)
T 3o0g_A          154 PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG-------NDVDDQLKRIFRLLGTPTEEQ  226 (292)
T ss_dssp             CCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCC-------SSHHHHHHHHHHHHCCCCTTT
T ss_pred             ccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCC-------CCHHHHHHHHHHHhCCCChhh
Confidence                  235799999999998765 799999999999999999998886431       111111111111   000000


Q ss_pred             h--hch------------hccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          331 A--LDR------------SILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       331 ~--~~~------------~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      +  ...            ..............+.+++.+|++.||++|||++|+++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  282 (292)
T 3o0g_A          227 WPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             CTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             hhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence            0  000            00000111223456789999999999999999999985


No 127
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00  E-value=1.8e-43  Score=320.61  Aligned_cols=243  Identities=24%  Similarity=0.387  Sum_probs=192.4

Q ss_pred             cccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecC-CeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPES-SRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lv  179 (380)
                      ..+.||+|+||.||++... |+.||+|.+....          ..+.+.+|+.++++++||||+++++++.+. +..++|
T Consensus        25 ~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~----------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv   93 (278)
T 1byg_A           25 LLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA----------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV   93 (278)
T ss_dssp             EEEEEEECSSCEEEEEEET-TEEEEEEECCCCC------------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEE
T ss_pred             EEeEEecCCCceEEEEEEc-CCEEEEEEecchh----------HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEE
Confidence            4578999999999999874 8999999986421          236788999999999999999999997554 478999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||+++|+|.+++....  ...+++..++.++.|++.||+|||   +.+++||||||+||+++.++.+||+|||++....
T Consensus        94 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~  168 (278)
T 1byg_A           94 TEYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS  168 (278)
T ss_dssp             ECCCTTEEHHHHHHHHH--HHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC-----
T ss_pred             EecCCCCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeecccccccc
Confidence            99999999999997522  334889999999999999999999   8999999999999999999999999999987654


Q ss_pred             C---CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhhchh
Q 047245          260 G---SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREALDRS  335 (380)
Q Consensus       260 ~---~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  335 (380)
                      .   ...+++.|+|||.+.+..++.++||||||+++|||++ |..||....        ..+......          ..
T Consensus       169 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~--------~~~~~~~~~----------~~  230 (278)
T 1byg_A          169 STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP--------LKDVVPRVE----------KG  230 (278)
T ss_dssp             -------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC--------GGGHHHHHT----------TT
T ss_pred             ccccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCC--------HHHHHHHHh----------cC
Confidence            3   2347889999999998999999999999999999998 999986311        111111111          11


Q ss_pred             ccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          336 ILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       336 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                      .. ...+......+.+++.+||+.||++|||+.|+++.|++++
T Consensus       231 ~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~  272 (278)
T 1byg_A          231 YK-MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK  272 (278)
T ss_dssp             CC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CC-CCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHH
Confidence            00 1111234456889999999999999999999999999875


No 128
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00  E-value=5.5e-43  Score=326.90  Aligned_cols=239  Identities=21%  Similarity=0.287  Sum_probs=194.3

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcC-CCCCcceeeEEEecCCeEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASL-RHRNLMSLRAYVPESSRFYL  178 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l  178 (380)
                      ..+.||+|+||.||++... +|+.||+|++.....     ........+..|..++..+ +||||+++++++.+.+..++
T Consensus        21 ~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~l   95 (345)
T 1xjd_A           21 LHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVV-----LMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFF   95 (345)
T ss_dssp             EEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHh-----hhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEE
Confidence            4578999999999999974 689999999975210     0112235677899999877 99999999999999999999


Q ss_pred             EEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccC
Q 047245          179 VYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLM  258 (380)
Q Consensus       179 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~  258 (380)
                      ||||+++|+|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+|||++.++.+||+|||+++..
T Consensus        96 v~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~  168 (345)
T 1xjd_A           96 VMEYLNGGDLMYHIQS----CHKFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKEN  168 (345)
T ss_dssp             EEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred             EEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence            9999999999999974    346899999999999999999999   899999999999999999999999999999754


Q ss_pred             C------CCCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhh
Q 047245          259 P------GSLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREAL  332 (380)
Q Consensus       259 ~------~~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  332 (380)
                      .      ....||+.|+|||.+.+..++.++||||||+++|||++|..||...        +............      
T Consensus       169 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~--------~~~~~~~~i~~~~------  234 (345)
T 1xjd_A          169 MLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ--------DEEELFHSIRMDN------  234 (345)
T ss_dssp             CCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHCC------
T ss_pred             ccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCC--------CHHHHHHHHHhCC------
Confidence            2      2345899999999999999999999999999999999999998631        1122222221110      


Q ss_pred             chhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHH-hHH
Q 047245          333 DRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSD-ELV  371 (380)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~-evl  371 (380)
                            ...+......+.+++.+||+.||++||++. |++
T Consensus       235 ------~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~  268 (345)
T 1xjd_A          235 ------PFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIR  268 (345)
T ss_dssp             ------CCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred             ------CCCCcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence                  011122345678999999999999999997 554


No 129
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00  E-value=1.1e-42  Score=316.39  Aligned_cols=241  Identities=20%  Similarity=0.303  Sum_probs=195.0

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcC-CCCCcceeeEEEecCCeEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASL-RHRNLMSLRAYVPESSRFYL  178 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l  178 (380)
                      ..+.||+|+||.||++... +++.||+|++......      ......+.+|+..+.++ +||||+++++++.+.+..++
T Consensus        15 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~------~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l   88 (289)
T 1x8b_A           15 ELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAG------SVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI   88 (289)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTT------SHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred             hhhhhcCCCceEEEEEEEcCCCceEEEEEecccccc------cHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence            4578999999999999975 7899999999753221      22346788999999999 99999999999999999999


Q ss_pred             EEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCC---------------
Q 047245          179 VYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDA---------------  243 (380)
Q Consensus       179 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~---------------  243 (380)
                      ||||+++|+|.+++.........+++..++.++.|++.||+|||   +.+++||||||+||+++.               
T Consensus        89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~  165 (289)
T 1x8b_A           89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDD  165 (289)
T ss_dssp             EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC----------------
T ss_pred             EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCccccccccccc
Confidence            99999999999999865544567999999999999999999999   899999999999999984               


Q ss_pred             ----CCceEEeccCCcccCCC--CCcCCCcccCcccccCC-CCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHH
Q 047245          244 ----EFTPRLADFGLAKLMPG--SLIATSAYSAPECFQNR-SYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLG  316 (380)
Q Consensus       244 ----~~~~kl~Dfgl~~~~~~--~~~~~~~y~aPE~~~~~-~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~  316 (380)
                          ...+||+|||.+.....  ...+++.|+|||.+.+. .++.++||||||+++|||++|..|+...          .
T Consensus       166 ~~~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----------~  235 (289)
T 1x8b_A          166 WASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG----------D  235 (289)
T ss_dssp             ----CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS----------H
T ss_pred             ccCCceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch----------h
Confidence                44799999999986653  34589999999999875 5668999999999999999998775421          0


Q ss_pred             HHHHHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          317 RWLRHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      .+. ... .+.     .+     ..+......+.+++.+||+.||++|||+.|+++
T Consensus       236 ~~~-~~~-~~~-----~~-----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  279 (289)
T 1x8b_A          236 QWH-EIR-QGR-----LP-----RIPQVLSQEFTELLKVMIHPDPERRPSAMALVK  279 (289)
T ss_dssp             HHH-HHH-TTC-----CC-----CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHH-HHH-cCC-----CC-----CCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence            111 111 110     01     111223456889999999999999999999975


No 130
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00  E-value=3e-43  Score=326.89  Aligned_cols=245  Identities=24%  Similarity=0.360  Sum_probs=191.3

Q ss_pred             cccccCccCCeeEEEEEe-cCCcE----EEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCe
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLT----VAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSR  175 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~----vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  175 (380)
                      ..+.||+|+||.||+|.. .+++.    ||+|.+.....       ....+.+.+|+.++++++||||+++++++.... 
T Consensus        19 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~-------~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-   90 (327)
T 3lzb_A           19 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-------PKANKEILDEAYVMASVDNPHVCRLLGICLTST-   90 (327)
T ss_dssp             EEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSS-------CCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-
T ss_pred             EEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccC-------HHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-
Confidence            457899999999999996 34554    46666643211       112367889999999999999999999998765 


Q ss_pred             EEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCc
Q 047245          176 FYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLA  255 (380)
Q Consensus       176 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~  255 (380)
                      .++++||+++|+|.+++..   ....+++..++.++.|++.||+|||   +.+++||||||+|||++.++.+||+|||++
T Consensus        91 ~~~v~~~~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a  164 (327)
T 3lzb_A           91 VQLITQLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLA  164 (327)
T ss_dssp             EEEEECCCSSCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC-
T ss_pred             ceEEEEecCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCcce
Confidence            7899999999999999974   2446899999999999999999999   899999999999999999999999999999


Q ss_pred             ccCCCC--------CcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhccCCCCHHHHHHHHHhhc
Q 047245          256 KLMPGS--------LIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEAASGGSLGRWLRHLQHAG  326 (380)
Q Consensus       256 ~~~~~~--------~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~l~~~~~~~~~~~  326 (380)
                      +.....        ..+++.|+|||.+.+..++.++||||||+++|||++ |..||......        .         
T Consensus       165 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--------~---------  227 (327)
T 3lzb_A          165 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--------E---------  227 (327)
T ss_dssp             ---------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--------G---------
T ss_pred             eEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH--------H---------
Confidence            865321        236778999999999999999999999999999999 99998642110        1         


Q ss_pred             chhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          327 EAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                       ..+.+..... ...+......+.+++.+||+.||.+|||+.|+++.|+++.
T Consensus       228 -~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  277 (327)
T 3lzb_A          228 -ISSILEKGER-LPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMA  277 (327)
T ss_dssp             -HHHHHHTTCC-CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             -HHHHHHcCCC-CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence             1111111110 1112224456889999999999999999999999998864


No 131
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00  E-value=2.8e-43  Score=321.11  Aligned_cols=253  Identities=22%  Similarity=0.357  Sum_probs=192.1

Q ss_pred             ccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEEEe
Q 047245          102 NRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLVYD  181 (380)
Q Consensus       102 ~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  181 (380)
                      .+.||+|+||.||++...+|+.||+|++.....      .......+.+|+.++++++||||+++++++.+.+..++|||
T Consensus         7 ~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (288)
T 1ob3_A            7 LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKE------DEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE   80 (288)
T ss_dssp             EEEEEEETTEEEEEEEETTSCEEEEEEECCSSG------GGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred             hhhcccCCCEEEEEEEcCCCCEEEEEEEecccc------ccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEE
Confidence            467999999999999998899999999965321      11123667899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCCC-
Q 047245          182 YLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMPG-  260 (380)
Q Consensus       182 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~-  260 (380)
                      |+++ +|.+++..   ....+++..+..++.|++.||+|||   +.+++||||||+||+++.++.+||+|||+++.... 
T Consensus        81 ~~~~-~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  153 (288)
T 1ob3_A           81 HLDQ-DLKKLLDV---CEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP  153 (288)
T ss_dssp             CCSE-EHHHHHHT---STTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-
T ss_pred             ecCC-CHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccCcc
Confidence            9975 99998863   2356899999999999999999999   89999999999999999999999999999875432 


Q ss_pred             -----CCcCCCcccCcccccC-CCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchh-----
Q 047245          261 -----SLIATSAYSAPECFQN-RSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAR-----  329 (380)
Q Consensus       261 -----~~~~~~~y~aPE~~~~-~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----  329 (380)
                           ...+|+.|+|||.+.+ ..++.++||||||+++|||++|..||.......    .+....+. .......     
T Consensus       154 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~----~~~~~~~~-~~~~~~~~~~~~  228 (288)
T 1ob3_A          154 VRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD----QLMRIFRI-LGTPNSKNWPNV  228 (288)
T ss_dssp             --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHHHH-HCCCCTTTSTTG
T ss_pred             ccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHH-HCCCChhhchhh
Confidence                 2358999999999976 458999999999999999999999986421100    01111110 0000000     


Q ss_pred             ---HhhchhccC------CcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          330 ---EALDRSILG------EEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       330 ---~~~~~~~~~------~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                         ...++....      ..........+.+++.+||+.||++|||++|+++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  280 (288)
T 1ob3_A          229 TELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (288)
T ss_dssp             GGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence               000100000      0001123456789999999999999999999975


No 132
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00  E-value=5e-43  Score=328.19  Aligned_cols=240  Identities=22%  Similarity=0.312  Sum_probs=183.1

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++... +++.||+|++....          ..+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        57 ~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~----------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv  126 (349)
T 2w4o_A           57 VESELGRGATSIVYRCKQKGTQKPYALKVLKKTV----------DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLV  126 (349)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------------CHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             EeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch----------hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEE
Confidence            4568999999999999985 57899999997521          125678899999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCC---CCceEEeccCCcc
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDA---EFTPRLADFGLAK  256 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~---~~~~kl~Dfgl~~  256 (380)
                      |||+++|+|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+|||++.   ++.+||+|||+++
T Consensus       127 ~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~  199 (349)
T 2w4o_A          127 LELVTGGELFDRIVE----KGYYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSK  199 (349)
T ss_dssp             ECCCCSCBHHHHHTT----CSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC---
T ss_pred             EEeCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCcccc
Confidence            999999999999863    446899999999999999999999   889999999999999975   8899999999998


Q ss_pred             cCCC-----CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHh
Q 047245          257 LMPG-----SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREA  331 (380)
Q Consensus       257 ~~~~-----~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  331 (380)
                      ....     ...||+.|+|||.+.+..++.++||||||+++|||++|..||....       ..............    
T Consensus       200 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-------~~~~~~~~i~~~~~----  268 (349)
T 2w4o_A          200 IVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDER-------GDQFMFRRILNCEY----  268 (349)
T ss_dssp             -------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTT-------CHHHHHHHHHTTCC----
T ss_pred             ccCcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCc-------ccHHHHHHHHhCCC----
Confidence            6543     2358999999999999999999999999999999999999986311       11111111111100    


Q ss_pred             hchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          332 LDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                         .. ...........+.+++.+||+.||++|||+.|+++
T Consensus       269 ---~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  305 (349)
T 2w4o_A          269 ---YF-ISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ  305 (349)
T ss_dssp             ---CC-CTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             ---cc-CCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence               00 00111234456889999999999999999999986


No 133
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00  E-value=1.9e-43  Score=325.85  Aligned_cols=248  Identities=21%  Similarity=0.283  Sum_probs=191.6

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCC----e
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESS----R  175 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~  175 (380)
                      ..+.||+|+||.||++.. .+|+.||+|++.....     ........+.+|+.++++++||||+++++++....    .
T Consensus        16 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~   90 (311)
T 3ork_A           16 LGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLA-----RDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   90 (311)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTT-----TSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred             EEEEEccCCCEEEEEEEECCCCceEEEEEeCcccc-----CCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence            457899999999999996 6789999999975322     23345578899999999999999999999986543    3


Q ss_pred             EEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCc
Q 047245          176 FYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLA  255 (380)
Q Consensus       176 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~  255 (380)
                      .++||||+++|+|.++++.    ...+++..++.++.|++.||+|||   +.+++||||||+||+++.++.+||+|||++
T Consensus        91 ~~lv~e~~~g~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a  163 (311)
T 3ork_A           91 PYIVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIA  163 (311)
T ss_dssp             EEEEEECCCEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSCC
T ss_pred             cEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccCc
Confidence            4999999999999999974    346899999999999999999999   889999999999999999999999999999


Q ss_pred             ccCCC---------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhc
Q 047245          256 KLMPG---------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAG  326 (380)
Q Consensus       256 ~~~~~---------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~  326 (380)
                      +....         ...||+.|+|||.+.+..++.++||||||+++|||++|+.||...        .............
T Consensus       164 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~--------~~~~~~~~~~~~~  235 (311)
T 3ork_A          164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD--------SPVSVAYQHVRED  235 (311)
T ss_dssp             ------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS--------SHHHHHHHHHHCC
T ss_pred             ccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC--------ChHHHHHHHhcCC
Confidence            76532         134899999999999999999999999999999999999998641        1112222211111


Q ss_pred             chhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHH-HHHhc
Q 047245          327 EAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELV-PMLTQ  376 (380)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl-~~L~~  376 (380)
                      ...    +..    ........+.+++.+||+.||++||++.+++ ..+.+
T Consensus       236 ~~~----~~~----~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~  278 (311)
T 3ork_A          236 PIP----PSA----RHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR  278 (311)
T ss_dssp             CCC----HHH----HSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             CCC----ccc----ccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHH
Confidence            100    000    0011345578999999999999999776654 44443


No 134
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00  E-value=6.3e-43  Score=316.99  Aligned_cols=241  Identities=25%  Similarity=0.387  Sum_probs=177.7

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++.. .+|+.||+|.+.....     ......+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        15 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (278)
T 3cok_A           15 VGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAM-----YKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV   89 (278)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred             eeeeecCCCceEEEEEEEccCCceEEEEEeehhhh-----hhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence            456899999999999997 5789999999964210     1112246788999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      +||+++++|.+++..   ....+++..++.++.|++.||+|||   +.+++||||||+||+++.++.+||+|||++....
T Consensus        90 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~  163 (278)
T 3cok_A           90 LEMCHNGEMNRYLKN---RVKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLK  163 (278)
T ss_dssp             EECCTTEEHHHHHHT---CSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EecCCCCcHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeecc
Confidence            999999999999873   3457899999999999999999999   8899999999999999999999999999997654


Q ss_pred             C------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhhc
Q 047245          260 G------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREALD  333 (380)
Q Consensus       260 ~------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  333 (380)
                      .      ...+++.|+|||.+.+..++.++||||||+++|||++|+.||......    .    ...         ....
T Consensus       164 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~----~~~---------~~~~  226 (278)
T 3cok_A          164 MPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVK----N----TLN---------KVVL  226 (278)
T ss_dssp             ----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------------------CCS
T ss_pred             CCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHH----H----HHH---------HHhh
Confidence            2      235889999999999989999999999999999999999998641100    0    000         0000


Q ss_pred             hhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          334 RSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      ..   ...+......+.+++.+||+.||++|||++++++
T Consensus       227 ~~---~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          227 AD---YEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             SC---CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             cc---cCCccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence            00   0111223456789999999999999999999975


No 135
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00  E-value=3.8e-43  Score=325.99  Aligned_cols=257  Identities=23%  Similarity=0.335  Sum_probs=200.4

Q ss_pred             cccccCccCCeeEEEEEe-----cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCC-
Q 047245          101 ENRLLGSSPDGKYYRTVL-----DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESS-  174 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-  174 (380)
                      ..+.||+|+||.||++..     .+|+.||+|++...        .....+.+.+|+.++++++||||+++++++...+ 
T Consensus        45 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  116 (326)
T 2w1i_A           45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--------TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR  116 (326)
T ss_dssp             EEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC--------CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC---
T ss_pred             eeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC--------CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCC
Confidence            457899999999999984     46899999998651        2234578999999999999999999999987654 


Q ss_pred             -eEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccC
Q 047245          175 -RFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFG  253 (380)
Q Consensus       175 -~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfg  253 (380)
                       ..++|+||+++|+|.+++..   ....+++..++.++.|++.||+|||   +.+++||||||+||+++.++.+||+|||
T Consensus       117 ~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg  190 (326)
T 2w1i_A          117 RNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFG  190 (326)
T ss_dssp             -CCEEEECCCTTCBHHHHHHH---STTSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCT
T ss_pred             CceEEEEECCCCCCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCc
Confidence             68999999999999999974   2346899999999999999999999   8999999999999999999999999999


Q ss_pred             CcccCCCC---------CcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhc----cCCCCHHHHHH
Q 047245          254 LAKLMPGS---------LIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEA----ASGGSLGRWLR  320 (380)
Q Consensus       254 l~~~~~~~---------~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~----~~~~~l~~~~~  320 (380)
                      ++......         ..++..|+|||.+.+..++.++||||||+++|||++|..|+.....+.    ...........
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (326)
T 2w1i_A          191 LTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF  270 (326)
T ss_dssp             TCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHH
T ss_pred             chhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHH
Confidence            99865432         236677999999998889999999999999999999999876321110    00000000000


Q ss_pred             HHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          321 HLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                            ...+.+..... ...+...+..+.+++.+||+.||++|||+.|+++.|++++
T Consensus       271 ------~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~  321 (326)
T 2w1i_A          271 ------HLIELLKNNGR-LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR  321 (326)
T ss_dssp             ------HHHHHHHTTCC-CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ------HHHHHhhcCCC-CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence                  01111111110 1112234566889999999999999999999999999875


No 136
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00  E-value=3e-43  Score=340.45  Aligned_cols=240  Identities=22%  Similarity=0.274  Sum_probs=189.0

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++.. .+|+.||+|++.....     ........+.+|+.++++++||||+++++++.+.+..++|
T Consensus       152 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv  226 (446)
T 4ejn_A          152 YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVI-----VAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV  226 (446)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-----C-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred             EeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhh-----hhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence            457899999999999986 5689999999975211     1223346678899999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCC-CCeEecCCCCCcEEeCCCCceEEeccCCcccC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCN-PQILHYNLKPTNVMLDAEFTPRLADFGLAKLM  258 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~-~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~  258 (380)
                      |||+++|+|.+++..    ...+++..+..++.|++.||+|||   + .+|+||||||+|||++.++.+||+|||+++..
T Consensus       227 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~  299 (446)
T 4ejn_A          227 MEYANGGELFFHLSR----ERVFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG  299 (446)
T ss_dssp             ECCCSSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred             EeeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence            999999999999874    346899999999999999999999   7 89999999999999999999999999999764


Q ss_pred             C------CCCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhh
Q 047245          259 P------GSLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREAL  332 (380)
Q Consensus       259 ~------~~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  332 (380)
                      .      ....||+.|+|||.+.+..++.++||||||+++|||++|+.||...        .............      
T Consensus       300 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~--------~~~~~~~~i~~~~------  365 (446)
T 4ejn_A          300 IKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ--------DHEKLFELILMEE------  365 (446)
T ss_dssp             CC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHCC------
T ss_pred             cCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCC--------CHHHHHHHHHhCC------
Confidence            3      2345899999999999999999999999999999999999998631        1112222211111      


Q ss_pred             chhccCCcccHHHHHHHHHHHHHcccCCCCCCC-----CHHhHHH
Q 047245          333 DRSILGEEVEEDEMLMAVRIAVVCLSDSPADRP-----SSDELVP  372 (380)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RP-----s~~evl~  372 (380)
                            ...+......+.+++.+||+.||.+||     |++|+++
T Consensus       366 ------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~  404 (446)
T 4ejn_A          366 ------IRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ  404 (446)
T ss_dssp             ------CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             ------CCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence                  011122345688999999999999999     9999874


No 137
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00  E-value=1.6e-42  Score=314.16  Aligned_cols=240  Identities=22%  Similarity=0.321  Sum_probs=193.4

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++... ++..+|+|++......        ..+.+.+|++++++++||||+++++++.+.+..++|
T Consensus        13 ~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~--------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (277)
T 3f3z_A           13 LENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE--------DVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLV   84 (277)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCS--------CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             eeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccc--------hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEE
Confidence            4568999999999999974 5778999998753221        136788999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEe---CCCCceEEeccCCcc
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVML---DAEFTPRLADFGLAK  256 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill---~~~~~~kl~Dfgl~~  256 (380)
                      |||+++++|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+||++   +.++.+||+|||++.
T Consensus        85 ~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~  157 (277)
T 3f3z_A           85 MELCTGGELFERVVH----KRVFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAA  157 (277)
T ss_dssp             EECCCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred             EeccCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccce
Confidence            999999999999874    346899999999999999999999   8999999999999999   788999999999997


Q ss_pred             cCCC-----CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHh
Q 047245          257 LMPG-----SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREA  331 (380)
Q Consensus       257 ~~~~-----~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  331 (380)
                      ....     ...+|+.|+|||.+.+. ++.++||||||+++|||++|..||...        ...............   
T Consensus       158 ~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~--------~~~~~~~~~~~~~~~---  225 (277)
T 3f3z_A          158 RFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAP--------TDSEVMLKIREGTFT---  225 (277)
T ss_dssp             ECCTTSCBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHCCCC---
T ss_pred             eccCccchhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCC--------CHHHHHHHHHhCCCC---
Confidence            6542     34589999999998654 899999999999999999999998641        111111111111000   


Q ss_pred             hchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          332 LDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                           ............+.+++.+|++.||++|||+.++++
T Consensus       226 -----~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~  261 (277)
T 3f3z_A          226 -----FPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE  261 (277)
T ss_dssp             -----CCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             -----CCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                 000000023456889999999999999999999874


No 138
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00  E-value=9.7e-43  Score=337.88  Aligned_cols=240  Identities=25%  Similarity=0.400  Sum_probs=196.9

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||+|... +|+.||||++.....     ........+.+|+.+++.++||||+++++++.+.+..++|
T Consensus        20 l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~-----~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv   94 (476)
T 2y94_A           20 LGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKI-----RSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV   94 (476)
T ss_dssp             EEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHH-----HHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhc-----cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            4568999999999999974 799999999975210     1112346788999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||+++|+|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+|||++.++.+||+|||+++...
T Consensus        95 ~E~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~  167 (476)
T 2y94_A           95 MEYVSGGELFDYICK----NGRLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS  167 (476)
T ss_dssp             EECCSSEEHHHHTTS----SSSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred             EeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhcc
Confidence            999999999999863    456999999999999999999999   9999999999999999999999999999998654


Q ss_pred             C-----CCcCCCcccCcccccCCCC-CCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhhc
Q 047245          260 G-----SLIATSAYSAPECFQNRSY-TDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREALD  333 (380)
Q Consensus       260 ~-----~~~~~~~y~aPE~~~~~~~-~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  333 (380)
                      .     ...||+.|+|||.+.+..+ +.++||||||+++|||++|..||...        ............        
T Consensus       168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~--------~~~~~~~~i~~~--------  231 (476)
T 2y94_A          168 DGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDD--------HVPTLFKKICDG--------  231 (476)
T ss_dssp             TTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCS--------SSHHHHHHHHTT--------
T ss_pred             ccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCC--------CHHHHHHHHhcC--------
Confidence            3     2458999999999988765 68999999999999999999998641        112222222111        


Q ss_pred             hhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          334 RSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                       ..   ..+......+.+++.+||+.||.+|||++|+++
T Consensus       232 -~~---~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~  266 (476)
T 2y94_A          232 -IF---YTPQYLNPSVISLLKHMLQVDPMKRATIKDIRE  266 (476)
T ss_dssp             -CC---CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             -Cc---CCCccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence             00   011123345789999999999999999999985


No 139
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00  E-value=9.5e-43  Score=331.04  Aligned_cols=240  Identities=21%  Similarity=0.313  Sum_probs=191.4

Q ss_pred             cccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCC--CCCcceeeEEEecCCeEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLR--HRNLMSLRAYVPESSRFYL  178 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~l  178 (380)
                      ..+.||+|+||.||++...+++.||||++....      ........+.+|+.++++++  ||||+++++++...+..++
T Consensus        60 ~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~l  133 (390)
T 2zmd_A           60 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE------ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM  133 (390)
T ss_dssp             EEEEEECCSSEEEEEEECTTCCEEEEEEEECTT------CCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             EEEEEccCCCeEEEEEEcCCCCEEEEEEEeccc------ccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEE
Confidence            457899999999999998889999999997522      13345678999999999996  5999999999999999999


Q ss_pred             EEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccC
Q 047245          179 VYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLM  258 (380)
Q Consensus       179 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~  258 (380)
                      ||| +.+++|.+++..    ...+++..+..++.|++.||+|||   +.+|+||||||+|||++ ++.+||+|||+++..
T Consensus       134 v~E-~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~  204 (390)
T 2zmd_A          134 VME-CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQM  204 (390)
T ss_dssp             EEE-CCSEEHHHHHHH----CSSCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC
T ss_pred             EEe-cCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCccccc
Confidence            999 568899999974    347899999999999999999999   99999999999999995 589999999999865


Q ss_pred             CC--------CCcCCCcccCcccccC-----------CCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHH
Q 047245          259 PG--------SLIATSAYSAPECFQN-----------RSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWL  319 (380)
Q Consensus       259 ~~--------~~~~~~~y~aPE~~~~-----------~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~  319 (380)
                      ..        ...||+.|+|||.+.+           ..++.++|||||||++|||++|..||....       ......
T Consensus       205 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~-------~~~~~~  277 (390)
T 2zmd_A          205 QPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-------NQISKL  277 (390)
T ss_dssp             ---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC-------CHHHHH
T ss_pred             cCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh-------HHHHHH
Confidence            32        2458999999999865           468899999999999999999999986311       111111


Q ss_pred             HHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          320 RHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      .         ..+++.... ..+......+.+++.+||+.||++|||+.|+++
T Consensus       278 ~---------~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  320 (390)
T 2zmd_A          278 H---------AIIDPNHEI-EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  320 (390)
T ss_dssp             H---------HHHCTTSCC-CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             H---------HHhCccccC-CCCccchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence            1         112211110 111112345789999999999999999999974


No 140
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00  E-value=9e-43  Score=325.28  Aligned_cols=254  Identities=24%  Similarity=0.348  Sum_probs=198.9

Q ss_pred             ccccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHc--CCCCCcceeeEEEecCC---
Q 047245          100 NENRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLAS--LRHRNLMSLRAYVPESS---  174 (380)
Q Consensus       100 ~~~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~---  174 (380)
                      ...+.||+|+||.||++.. +|+.||+|++...           ....+.+|.+++..  ++||||+++++++....   
T Consensus        45 ~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-----------~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~  112 (342)
T 1b6c_B           45 VLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-----------EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW  112 (342)
T ss_dssp             EEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG-----------GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSC
T ss_pred             EEEeeecCCCCcEEEEEEE-cCccEEEEEeCch-----------hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcc
Confidence            3567899999999999998 5899999998541           12566778888887  78999999999998776   


Q ss_pred             -eEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcC-----CCCeEecCCCCCcEEeCCCCceE
Q 047245          175 -RFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTC-----NPQILHYNLKPTNVMLDAEFTPR  248 (380)
Q Consensus       175 -~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-----~~~iiH~dlk~~Nill~~~~~~k  248 (380)
                       ..++||||+++|+|.+++..     ..+++..++.++.|++.||+|||...     +.+++||||||+||+++.++.+|
T Consensus       113 ~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~k  187 (342)
T 1b6c_B          113 TQLWLVSDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC  187 (342)
T ss_dssp             CCEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEE
T ss_pred             ceeEEEEeecCCCcHHHHHhc-----cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEE
Confidence             78999999999999999973     36899999999999999999999321     46899999999999999999999


Q ss_pred             EeccCCcccCCC----------CCcCCCcccCcccccCC------CCCCcchhhHHHHHHHHHHhC----------CCCC
Q 047245          249 LADFGLAKLMPG----------SLIATSAYSAPECFQNR------SYTDKSDIFSFGMILAVLLTG----------RDPT  302 (380)
Q Consensus       249 l~Dfgl~~~~~~----------~~~~~~~y~aPE~~~~~------~~~~~sDv~s~Gvil~el~tg----------~~p~  302 (380)
                      |+|||++.....          ...+++.|+|||.+.+.      .++.++||||||+++|||++|          ..||
T Consensus       188 L~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~  267 (342)
T 1b6c_B          188 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY  267 (342)
T ss_dssp             ECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred             EEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCc
Confidence            999999865332          23589999999999765      234689999999999999999          6676


Q ss_pred             CchhhhccCCCCHHHHHHHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          303 APFFAEAASGGSLGRWLRHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       303 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                      ...   .........+........     ..+.+.......+....+.+++.+||+.||++|||+.|+++.|+++.
T Consensus       268 ~~~---~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~  335 (342)
T 1b6c_B          268 YDL---VPSDPSVEEMRKVVCEQK-----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS  335 (342)
T ss_dssp             TTT---SCSSCCHHHHHHHHTTSC-----CCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ccc---CcCcccHHHHHHHHHHHH-----hCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence            531   111222333333222111     11111111122356778999999999999999999999999999874


No 141
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=1.2e-42  Score=314.67  Aligned_cols=239  Identities=24%  Similarity=0.363  Sum_probs=176.1

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++.. .+|+.||+|++......     .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        17 i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   91 (275)
T 2eue_A           17 IVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLA-----KSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV   91 (275)
T ss_dssp             CCC---------EEEEECTTTCCEEEEEEECSCC----------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred             EEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcc-----hHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence            346899999999999985 57899999998753221     122346788999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||+ +++|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+||++++++.+||+|||++....
T Consensus        92 ~e~~-~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~  163 (275)
T 2eue_A           92 IEYA-GNELFDYIVQ----RDKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT  163 (275)
T ss_dssp             EECC-CEEHHHHHHT----SSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCSSCC----
T ss_pred             ehhc-CCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCCeeccCChHhEEECCCCCEEEeecccceecc
Confidence            9999 6788888863    346999999999999999999999   8899999999999999999999999999997654


Q ss_pred             C-----CCcCCCcccCcccccCCCC-CCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhhc
Q 047245          260 G-----SLIATSAYSAPECFQNRSY-TDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREALD  333 (380)
Q Consensus       260 ~-----~~~~~~~y~aPE~~~~~~~-~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  333 (380)
                      .     ...+|+.|+|||.+.+..+ +.++||||||+++|||++|+.||...        .............       
T Consensus       164 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--------~~~~~~~~~~~~~-------  228 (275)
T 2eue_A          164 DGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE--------SIPVLFKNISNGV-------  228 (275)
T ss_dssp             -----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHTC-------
T ss_pred             CcccccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCC--------CHHHHHHHHHhCC-------
Confidence            3     2358999999999988765 78999999999999999999998641        1122222211110       


Q ss_pred             hhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          334 RSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                           ...+......+.+++.+||+.||.+|||++|+++
T Consensus       229 -----~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~  262 (275)
T 2eue_A          229 -----YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             -----CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             -----CCCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence                 0111223455789999999999999999999974


No 142
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00  E-value=3.5e-42  Score=324.39  Aligned_cols=249  Identities=24%  Similarity=0.373  Sum_probs=198.6

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcC-CCCCcceeeEEEecCCeEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASL-RHRNLMSLRAYVPESSRFYL  178 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l  178 (380)
                      ..+.||+|+||.||++... +|+.||||++................+.+.+|+.+++++ +||||+++++++...+..++
T Consensus        98 ~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l  177 (365)
T 2y7j_A           98 PKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFL  177 (365)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEE
T ss_pred             cceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEE
Confidence            4478999999999999985 799999999976433222223344567889999999999 89999999999999999999


Q ss_pred             EEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccC
Q 047245          179 VYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLM  258 (380)
Q Consensus       179 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~  258 (380)
                      ||||+++|+|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+||+++.++.+||+|||++...
T Consensus       178 v~e~~~g~~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~  250 (365)
T 2y7j_A          178 VFDLMRKGELFDYLTE----KVALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHL  250 (365)
T ss_dssp             EECCCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEEecCccccc
Confidence            9999999999999974    346899999999999999999999   889999999999999999999999999998765


Q ss_pred             CC-----CCcCCCcccCcccccC------CCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcc
Q 047245          259 PG-----SLIATSAYSAPECFQN------RSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGE  327 (380)
Q Consensus       259 ~~-----~~~~~~~y~aPE~~~~------~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~  327 (380)
                      ..     ...||+.|+|||.+.+      ..++.++||||||+++|||++|..||...        ..............
T Consensus       251 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~--------~~~~~~~~i~~~~~  322 (365)
T 2y7j_A          251 EPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHR--------RQILMLRMIMEGQY  322 (365)
T ss_dssp             CTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHTCC
T ss_pred             CCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCC--------CHHHHHHHHHhCCC
Confidence            43     2458999999999863      35889999999999999999999998631        11111111111100


Q ss_pred             hhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          328 AREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                       .  ....     ........+.+++.+||+.||++|||+.|+++
T Consensus       323 -~--~~~~-----~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  359 (365)
T 2y7j_A          323 -Q--FSSP-----EWDDRSSTVKDLISRLLQVDPEARLTAEQALQ  359 (365)
T ss_dssp             -C--CCHH-----HHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             -C--CCCc-----ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence             0  0000     00112345889999999999999999999986


No 143
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00  E-value=5.2e-42  Score=315.96  Aligned_cols=248  Identities=20%  Similarity=0.248  Sum_probs=194.8

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++... +++.||+|++.....     ......+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        38 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv  112 (309)
T 2h34_A           38 LRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLS-----SDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD  112 (309)
T ss_dssp             EEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGG-----GSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             EEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccc-----cCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence            4578999999999999974 688999999865221     2344567899999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      +||+++++|.+++..    ...+++..++.++.|++.||+|||   +.+++||||||+||+++.++.+||+|||++....
T Consensus       113 ~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~  185 (309)
T 2h34_A          113 MRLINGVDLAAMLRR----QGPLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASATT  185 (309)
T ss_dssp             EECCCCEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred             EEecCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence            999999999999974    346899999999999999999999   8899999999999999999999999999987654


Q ss_pred             C-------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhh
Q 047245          260 G-------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREAL  332 (380)
Q Consensus       260 ~-------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  332 (380)
                      .       ...+++.|+|||.+.+..++.++||||||+++|||++|..||....         .............    
T Consensus       186 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~---------~~~~~~~~~~~~~----  252 (309)
T 2h34_A          186 DEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQ---------LSVMGAHINQAIP----  252 (309)
T ss_dssp             -----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCH---------HHHHHHHHHSCCC----
T ss_pred             ccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCch---------HHHHHHHhccCCC----
Confidence            3       2358899999999999999999999999999999999999986411         1111111111100    


Q ss_pred             chhccCCcccHHHHHHHHHHHHHcccCCCCCCC-CHHhHHHHHhcc
Q 047245          333 DRSILGEEVEEDEMLMAVRIAVVCLSDSPADRP-SSDELVPMLTQL  377 (380)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RP-s~~evl~~L~~l  377 (380)
                      .+    .......+..+.+++.+||+.||++|| |++++++.|++.
T Consensus       253 ~~----~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~  294 (309)
T 2h34_A          253 RP----STVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAA  294 (309)
T ss_dssp             CG----GGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHT
T ss_pred             Cc----cccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHH
Confidence            00    011122344578899999999999999 999999999875


No 144
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00  E-value=1.3e-43  Score=331.72  Aligned_cols=260  Identities=14%  Similarity=0.127  Sum_probs=192.0

Q ss_pred             cccccCccCCeeEEEEEec----CCcEEEEEEeeeccCCChhhhc----HHHHHHHHHHHHHHHcCCCCCcceeeEEEec
Q 047245          101 ENRLLGSSPDGKYYRTVLD----NGLTVAVRRVEAFESGSPEKQN----KSVKRRIQQELEVLASLRHRNLMSLRAYVPE  172 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~----~g~~vavK~~~~~~~~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  172 (380)
                      ..+.||+|+||.||++...    ++..+|+|+....... ...+.    ......+.+|+..++.++||||+++++++..
T Consensus        41 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~-~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~  119 (345)
T 2v62_A           41 LGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGP-LFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLT  119 (345)
T ss_dssp             EEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CH-HHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEE
T ss_pred             EEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcc-hHHHHHHHHHHhhhHHHHHHHhhccccccCcceeeccccc
Confidence            4578999999999999975    5788999998753210 00000    0112346789999999999999999999887


Q ss_pred             ----CCeEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCC--c
Q 047245          173 ----SSRFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEF--T  246 (380)
Q Consensus       173 ----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~--~  246 (380)
                          ....++||||+ +++|.+++..    ...+++..++.++.|++.||+|||   +.+++||||||+|||++.++  .
T Consensus       120 ~~~~~~~~~lv~e~~-~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~  191 (345)
T 2v62_A          120 EFKGRSYRFMVMERL-GIDLQKISGQ----NGTFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGYKNPDQ  191 (345)
T ss_dssp             ESSSCEEEEEEEECE-EEEHHHHCBG----GGBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEESSSTTS
T ss_pred             ccCCCcEEEEEEecc-CCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEccCCCCc
Confidence                67899999999 9999999874    237999999999999999999999   88999999999999998877  9


Q ss_pred             eEEeccCCcccCC-------------CCCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCC
Q 047245          247 PRLADFGLAKLMP-------------GSLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGG  313 (380)
Q Consensus       247 ~kl~Dfgl~~~~~-------------~~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~  313 (380)
                      +||+|||+++...             ....||+.|+|||.+.+..++.++||||||+++|||++|+.||......    .
T Consensus       192 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~----~  267 (345)
T 2v62_A          192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKD----P  267 (345)
T ss_dssp             EEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTC----H
T ss_pred             EEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccc----c
Confidence            9999999997542             1235899999999999999999999999999999999999998531100    0


Q ss_pred             CHHHHHHHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          314 SLGRWLRHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       314 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                      ........... ......+......    ...+..+.+++.+||+.||++|||+++|++.|+++.
T Consensus       268 ~~~~~~~~~~~-~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~  327 (345)
T 2v62_A          268 VAVQTAKTNLL-DELPQSVLKWAPS----GSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG  327 (345)
T ss_dssp             HHHHHHHHHHH-HTTTHHHHHHSCT----TSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred             HHHHHHHHhhc-ccccHHHHhhccc----cccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence            00111111111 0111111111100    023446889999999999999999999999998763


No 145
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00  E-value=3.6e-43  Score=326.27  Aligned_cols=248  Identities=24%  Similarity=0.421  Sum_probs=197.0

Q ss_pred             cccccCccCCeeEEEEEec-CCcE--EEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcC-CCCCcceeeEEEecCCeE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLT--VAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASL-RHRNLMSLRAYVPESSRF  176 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~--vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~  176 (380)
                      ..+.||+|+||.||++... +|..  +|+|.+....       .....+.+.+|+.+++++ +||||+++++++.+.+..
T Consensus        29 ~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~-------~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~  101 (327)
T 1fvr_A           29 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-------SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL  101 (327)
T ss_dssp             EEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEE
T ss_pred             ceeeeecCCCceEEEEEEccCCcccceeeeeecccc-------chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCce
Confidence            4578999999999999864 5554  4899886421       122346788999999999 899999999999999999


Q ss_pred             EEEEeecCCCCHHHHHHHhh------------hcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCC
Q 047245          177 YLVYDYLQTGSLEDAMDRIR------------ENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAE  244 (380)
Q Consensus       177 ~lv~e~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~  244 (380)
                      ++||||+++|+|.+++....            .....+++..++.++.|++.||+|||   +.+++||||||+||+++.+
T Consensus       102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~  178 (327)
T 1fvr_A          102 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGEN  178 (327)
T ss_dssp             EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGG
T ss_pred             EEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCC
Confidence            99999999999999997532            12347999999999999999999999   8999999999999999999


Q ss_pred             CceEEeccCCcccCCC-----CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhccCCCCHHHH
Q 047245          245 FTPRLADFGLAKLMPG-----SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEAASGGSLGRW  318 (380)
Q Consensus       245 ~~~kl~Dfgl~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~l~~~  318 (380)
                      +.+||+|||+++....     ...+++.|+|||.+.+..++.++||||||+++|||++ |..||...        .....
T Consensus       179 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~--------~~~~~  250 (327)
T 1fvr_A          179 YVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM--------TCAEL  250 (327)
T ss_dssp             GCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC--------CHHHH
T ss_pred             CeEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCC--------cHHHH
Confidence            9999999999875331     2346788999999998889999999999999999998 99998631        11111


Q ss_pred             HHHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhcc
Q 047245          319 LRHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQL  377 (380)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l  377 (380)
                      .....          .... ...+......+.+++.+||+.||++|||++|+++.|+++
T Consensus       251 ~~~~~----------~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~  298 (327)
T 1fvr_A          251 YEKLP----------QGYR-LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM  298 (327)
T ss_dssp             HHHGG----------GTCC-CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHhh----------cCCC-CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            11111          1100 011122345688999999999999999999999998875


No 146
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00  E-value=1.4e-42  Score=325.19  Aligned_cols=235  Identities=23%  Similarity=0.268  Sum_probs=192.4

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcC-CCCCcceeeEEEecCCeEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASL-RHRNLMSLRAYVPESSRFYL  178 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l  178 (380)
                      ..+.||+|+||.||++... +|+.||+|++.....     ......+.+..|..++..+ +||||+++++++.+.+..++
T Consensus        24 ~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~-----~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l   98 (353)
T 2i0e_A           24 FLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVV-----IQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF   98 (353)
T ss_dssp             EEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred             EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHh-----hcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence            4578999999999999975 478999999975211     0112246678899999998 89999999999999999999


Q ss_pred             EEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccC
Q 047245          179 VYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLM  258 (380)
Q Consensus       179 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~  258 (380)
                      ||||+++|+|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+|||++.++.+||+|||+++..
T Consensus        99 v~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~  171 (353)
T 2i0e_A           99 VMEYVNGGDLMYHIQQ----VGRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN  171 (353)
T ss_dssp             EEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred             EEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCccccc
Confidence            9999999999999974    346899999999999999999999   899999999999999999999999999999863


Q ss_pred             C------CCCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhh
Q 047245          259 P------GSLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREAL  332 (380)
Q Consensus       259 ~------~~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  332 (380)
                      .      ....||+.|+|||.+.+..++.++||||||+++|||++|+.||...        .............      
T Consensus       172 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~--------~~~~~~~~i~~~~------  237 (353)
T 2i0e_A          172 IWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE--------DEDELFQSIMEHN------  237 (353)
T ss_dssp             CCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHCC------
T ss_pred             ccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCC--------CHHHHHHHHHhCC------
Confidence            2      2345899999999999999999999999999999999999998631        1222222222111      


Q ss_pred             chhccCCcccHHHHHHHHHHHHHcccCCCCCCCCH
Q 047245          333 DRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSS  367 (380)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~  367 (380)
                            ...+......+.+++.+||+.||++||++
T Consensus       238 ------~~~p~~~s~~~~~li~~lL~~dP~~R~~~  266 (353)
T 2i0e_A          238 ------VAYPKSMSKEAVAICKGLMTKHPGKRLGC  266 (353)
T ss_dssp             ------CCCCTTSCHHHHHHHHHHTCSCTTSCTTC
T ss_pred             ------CCCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence                  01112344568899999999999999964


No 147
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00  E-value=2.7e-42  Score=317.92  Aligned_cols=258  Identities=21%  Similarity=0.325  Sum_probs=192.6

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++... +|+.||+|++....      ......+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus         7 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (311)
T 4agu_A            7 KIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESE------DDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLV   80 (311)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEECCCC------C-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             EeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccc------cchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEE
Confidence            3468999999999999974 58999999986521      2334457788999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||+++++|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+||+++.++.+||+|||++....
T Consensus        81 ~e~~~~~~l~~~~~~----~~~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  153 (311)
T 4agu_A           81 FEYCDHTVLHELDRY----QRGVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLT  153 (311)
T ss_dssp             EECCSEEHHHHHHHT----SSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EEeCCCchHHHHHhh----hcCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhcc
Confidence            999999999988763    456899999999999999999999   8999999999999999999999999999997654


Q ss_pred             C------CCcCCCcccCcccccC-CCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccC-------CCCHHHHHHHHHhh
Q 047245          260 G------SLIATSAYSAPECFQN-RSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAAS-------GGSLGRWLRHLQHA  325 (380)
Q Consensus       260 ~------~~~~~~~y~aPE~~~~-~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~-------~~~l~~~~~~~~~~  325 (380)
                      .      ...+++.|+|||.+.+ ..++.++||||||+++|||++|..||.........       ......+.......
T Consensus       154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (311)
T 4agu_A          154 GPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTN  233 (311)
T ss_dssp             ------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTC
T ss_pred             CcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccc
Confidence            2      2358899999999976 67899999999999999999999998642111000       00000000000000


Q ss_pred             cchhHhhchhccCCc-----ccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          326 GEAREALDRSILGEE-----VEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       326 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                       ..............     ........+.+++.+||+.||++|||++|+++
T Consensus       234 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  284 (311)
T 4agu_A          234 -QYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH  284 (311)
T ss_dssp             -GGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred             -cccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence             00000000000000     00123445789999999999999999999984


No 148
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00  E-value=3e-42  Score=324.24  Aligned_cols=189  Identities=29%  Similarity=0.392  Sum_probs=167.4

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCC-----CCCcceeeEEEecCC
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLR-----HRNLMSLRAYVPESS  174 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~l~~~~~~~~  174 (380)
                      ..+.||+|+||.||++.. .+++.||||++..         .....+.+..|+.+++.++     ||||+++++++...+
T Consensus        39 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~---------~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~  109 (360)
T 3llt_A           39 VIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN---------IKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYD  109 (360)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEECS---------CHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETT
T ss_pred             EEEEEcccCCeEEEEEEECCCCeEEEEEEecc---------chhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECC
Confidence            457899999999999997 5788999999863         2233466778999999997     999999999999999


Q ss_pred             eEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCC-----------
Q 047245          175 RFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDA-----------  243 (380)
Q Consensus       175 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~-----------  243 (380)
                      ..++||||+ +++|.+++..  .....+++..+..++.|++.||+|||   +.+++||||||+|||++.           
T Consensus       110 ~~~lv~e~~-~~~L~~~~~~--~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~~~~~  183 (360)
T 3llt_A          110 HMCLIFEPL-GPSLYEIITR--NNYNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLDDPYFEKSLITVR  183 (360)
T ss_dssp             EEEEEECCC-CCBHHHHHHH--TTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCTTCCEEEEEEE
T ss_pred             eeEEEEcCC-CCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEccccccccccchh
Confidence            999999999 8999999985  22345899999999999999999999   899999999999999975           


Q ss_pred             --------------CCceEEeccCCcccCCC---CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCc
Q 047245          244 --------------EFTPRLADFGLAKLMPG---SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAP  304 (380)
Q Consensus       244 --------------~~~~kl~Dfgl~~~~~~---~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~  304 (380)
                                    ++.+||+|||+++....   ...||+.|+|||.+.+..++.++||||||+++|||++|+.||..
T Consensus       184 ~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  261 (360)
T 3llt_A          184 RVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRT  261 (360)
T ss_dssp             CTTTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             cccccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCC
Confidence                          78999999999986543   34689999999999999999999999999999999999999964


No 149
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00  E-value=3.5e-42  Score=318.76  Aligned_cols=248  Identities=22%  Similarity=0.335  Sum_probs=198.9

Q ss_pred             ccccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEE
Q 047245          100 NENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYL  178 (380)
Q Consensus       100 ~~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  178 (380)
                      ...+.||+|+||.||++... +|+.||+|.+.........  .....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus        15 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   92 (321)
T 2a2a_A           15 DIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASR--RGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVL   92 (321)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCS--SSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             EEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccc--cchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence            35678999999999999974 6899999999764332211  11124678899999999999999999999999999999


Q ss_pred             EEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCC----ceEEeccCC
Q 047245          179 VYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEF----TPRLADFGL  254 (380)
Q Consensus       179 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~----~~kl~Dfgl  254 (380)
                      ||||+++++|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+||+++.++    .+||+|||+
T Consensus        93 v~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~  165 (321)
T 2a2a_A           93 ILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL  165 (321)
T ss_dssp             EECCCCSCBHHHHHHT----CSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCTT
T ss_pred             EEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEccCcc
Confidence            9999999999999973    446899999999999999999999   88999999999999999887    799999999


Q ss_pred             cccCCC-----CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchh
Q 047245          255 AKLMPG-----SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAR  329 (380)
Q Consensus       255 ~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~  329 (380)
                      +.....     ...+++.|+|||.+.+..++.++||||||+++|||++|..||...        ...+..........  
T Consensus       166 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--------~~~~~~~~i~~~~~--  235 (321)
T 2a2a_A          166 AHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD--------TKQETLANITSVSY--  235 (321)
T ss_dssp             CEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS--------SHHHHHHHHHTTCC--
T ss_pred             ceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCC--------CHHHHHHHHHhccc--
Confidence            976543     235899999999999999999999999999999999999998631        11122222111100  


Q ss_pred             HhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          330 EALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                       ..++..     .......+.+++.+||+.||++|||++|+++
T Consensus       236 -~~~~~~-----~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~  272 (321)
T 2a2a_A          236 -DFDEEF-----FSHTSELAKDFIRKLLVKETRKRLTIQEALR  272 (321)
T ss_dssp             -CCCHHH-----HTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred             -ccChhh-----hcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence             000000     0123345789999999999999999999986


No 150
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00  E-value=6.6e-43  Score=322.71  Aligned_cols=250  Identities=22%  Similarity=0.328  Sum_probs=190.0

Q ss_pred             ccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcC-CCCCcceeeEEEecCCeEEEE
Q 047245          102 NRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASL-RHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       102 ~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv  179 (380)
                      .++||+|+||.||++.. .+|+.||||++.....        .....+.+|+.++.++ +||||+++++++.+.+..++|
T Consensus        18 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv   89 (316)
T 2ac3_A           18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPG--------HIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLV   89 (316)
T ss_dssp             CCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSS--------CCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             CceecCCceEEEEEEEEcCCCcEEEEEEEeeCcc--------hhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEE
Confidence            36799999999999985 5789999999975321        1236788999999995 799999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCc---eEEeccCCcc
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFT---PRLADFGLAK  256 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~---~kl~Dfgl~~  256 (380)
                      |||+++|+|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+||+++.++.   +||+|||++.
T Consensus        90 ~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~  162 (316)
T 2ac3_A           90 FEKMRGGSILSHIHK----RRHFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGS  162 (316)
T ss_dssp             EECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC
T ss_pred             EEcCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCcc
Confidence            999999999999975    346899999999999999999999   889999999999999998766   9999999987


Q ss_pred             cCCC-------------CCcCCCcccCcccccC-----CCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCC---H
Q 047245          257 LMPG-------------SLIATSAYSAPECFQN-----RSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGS---L  315 (380)
Q Consensus       257 ~~~~-------------~~~~~~~y~aPE~~~~-----~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~---l  315 (380)
                      ....             ...||+.|+|||.+.+     ..++.++||||||+++|||++|..||............   .
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~  242 (316)
T 2ac3_A          163 GIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEAC  242 (316)
T ss_dssp             -------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CC
T ss_pred             ccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccc
Confidence            5431             1248999999999875     56889999999999999999999999642211100000   0


Q ss_pred             HHHHHHHHhhcchhHhhchhccCCcc--cHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          316 GRWLRHLQHAGEAREALDRSILGEEV--EEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      ......      ..+.+.........  .......+.+++.+||+.||++|||++|+++
T Consensus       243 ~~~~~~------~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  295 (316)
T 2ac3_A          243 PACQNM------LFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ  295 (316)
T ss_dssp             HHHHHH------HHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             hhHHHH------HHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence            000000      00111110000000  0113456889999999999999999999986


No 151
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00  E-value=1.2e-42  Score=331.28  Aligned_cols=240  Identities=20%  Similarity=0.298  Sum_probs=184.7

Q ss_pred             cccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHc-CCCCCcceeeEEEec----CCeE
Q 047245          103 RLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLAS-LRHRNLMSLRAYVPE----SSRF  176 (380)
Q Consensus       103 ~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~----~~~~  176 (380)
                      ++||+|+||.||++.. .+|+.||||++...             ..+.+|+.++.+ .+||||+++++++..    ....
T Consensus        68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-------------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~  134 (400)
T 1nxk_A           68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL  134 (400)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECS-------------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             ceeeeccCeEEEEEEECCCCCEEEEEEeCcc-------------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence            6799999999999987 46889999998631             346678888744 489999999998865    5678


Q ss_pred             EEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCC---CCceEEeccC
Q 047245          177 YLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDA---EFTPRLADFG  253 (380)
Q Consensus       177 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~---~~~~kl~Dfg  253 (380)
                      ++||||+++|+|.+++..  .....+++..+..++.|++.||+|||   +.+|+||||||+|||++.   ++.+||+|||
T Consensus       135 ~lv~E~~~gg~L~~~l~~--~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG  209 (400)
T 1nxk_A          135 LIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFG  209 (400)
T ss_dssp             EEEEECCCSEEHHHHHHC--C---CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECCCT
T ss_pred             EEEEEeCCCCcHHHHHHH--hCCCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEecc
Confidence            999999999999999974  22346899999999999999999999   899999999999999997   7899999999


Q ss_pred             CcccCCC-----CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcch
Q 047245          254 LAKLMPG-----SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEA  328 (380)
Q Consensus       254 l~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~  328 (380)
                      +++....     ...||+.|+|||.+.+..++.++|||||||++|||++|..||......... ......+   . .+..
T Consensus       210 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~-~~~~~~i---~-~~~~  284 (400)
T 1nxk_A          210 FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-PGMKTRI---R-MGQY  284 (400)
T ss_dssp             TCEECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSC-CSHHHHH---H-HTCC
T ss_pred             cccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCcccccc-HHHHHHH---H-cCcc
Confidence            9986543     235899999999999999999999999999999999999999642111100 0111111   1 0100


Q ss_pred             hHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          329 REALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                          .  .. ..........+.+++.+||+.||++|||+.|+++
T Consensus       285 ----~--~~-~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~  321 (400)
T 1nxk_A          285 ----E--FP-NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  321 (400)
T ss_dssp             ----C--CC-TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             ----c--CC-CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence                0  00 0001223456889999999999999999999985


No 152
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00  E-value=3.7e-43  Score=324.20  Aligned_cols=250  Identities=23%  Similarity=0.356  Sum_probs=198.6

Q ss_pred             cccccCccCCeeEEEEEe------cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcC-CCCCcceeeEEEecC
Q 047245          101 ENRLLGSSPDGKYYRTVL------DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASL-RHRNLMSLRAYVPES  173 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~  173 (380)
                      ..+.||+|+||.||++..      .+++.||+|++...       ......+.+.+|+.++.++ +||||+++++++...
T Consensus        31 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-------~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  103 (316)
T 2xir_A           31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG-------ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP  103 (316)
T ss_dssp             EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT-------CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred             eeeEEcCCCceeEEEEEEecCCccccceEEEEEecccC-------CCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecC
Confidence            567899999999999984      35689999998642       1233456789999999999 799999999998765


Q ss_pred             C-eEEEEEeecCCCCHHHHHHHhhhc------------ccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEE
Q 047245          174 S-RFYLVYDYLQTGSLEDAMDRIREN------------QLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVM  240 (380)
Q Consensus       174 ~-~~~lv~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nil  240 (380)
                      + ..++||||+++|+|.+++......            ...+++..++.++.|++.||+|||   +.+++||||||+||+
T Consensus       104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil  180 (316)
T 2xir_A          104 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNIL  180 (316)
T ss_dssp             TSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEE
T ss_pred             CCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEE
Confidence            4 589999999999999999753221            122789999999999999999999   889999999999999


Q ss_pred             eCCCCceEEeccCCcccCCCC--------CcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhccC
Q 047245          241 LDAEFTPRLADFGLAKLMPGS--------LIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEAAS  311 (380)
Q Consensus       241 l~~~~~~kl~Dfgl~~~~~~~--------~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~~~  311 (380)
                      ++.++.+||+|||+++.....        ..+++.|+|||.+.+..++.++||||||+++|||++ |..||....     
T Consensus       181 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~-----  255 (316)
T 2xir_A          181 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK-----  255 (316)
T ss_dssp             ECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----
T ss_pred             ECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccc-----
Confidence            999999999999999865432        236778999999999999999999999999999998 999985310     


Q ss_pred             CCCHHHHHHHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          312 GGSLGRWLRHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       312 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                        ..............           ...+......+.+++.+||+.||.+|||+.|+++.|+++.
T Consensus       256 --~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  309 (316)
T 2xir_A          256 --IDEEFCRRLKEGTR-----------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL  309 (316)
T ss_dssp             --CSHHHHHHHHHTCC-----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             --hhHHHHHHhccCcc-----------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence              00111111111110           0111223455889999999999999999999999998763


No 153
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00  E-value=4.5e-42  Score=313.93  Aligned_cols=240  Identities=22%  Similarity=0.338  Sum_probs=197.5

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++... +++.+|+|.+......     .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        19 ~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~-----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   93 (294)
T 2rku_A           19 RGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLL-----KPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV   93 (294)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC-----SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             EEEEEeecCCEEEEEEEECCCCceEEEEEechhhcc-----CHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence            4578999999999999975 5789999998753221     234457888999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||+++++|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+||+++.++.+||+|||++....
T Consensus        94 ~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~  166 (294)
T 2rku_A           94 LELCRRRSLLELHKR----RKALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE  166 (294)
T ss_dssp             EECCTTCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCceecc
Confidence            999999999998864    346899999999999999999999   8899999999999999999999999999997653


Q ss_pred             C------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhhc
Q 047245          260 G------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREALD  333 (380)
Q Consensus       260 ~------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  333 (380)
                      .      ...+++.|+|||.+.+..++.++||||||+++|||++|..||...        ...+.........       
T Consensus       167 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~--------~~~~~~~~~~~~~-------  231 (294)
T 2rku_A          167 YDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS--------CLKETYLRIKKNE-------  231 (294)
T ss_dssp             STTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCS--------SHHHHHHHHHTTC-------
T ss_pred             cCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC--------CHHHHHHHHhhcc-------
Confidence            2      235889999999999989999999999999999999999998641        1111111111110       


Q ss_pred             hhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          334 RSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                        .   ..+......+.+++.+||+.||++|||++|+++
T Consensus       232 --~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~  265 (294)
T 2rku_A          232 --Y---SIPKHINPVAASLIQKMLQTDPTARPTINELLN  265 (294)
T ss_dssp             --C---CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             --C---CCccccCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence              0   111223345788999999999999999999985


No 154
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00  E-value=1.2e-42  Score=323.42  Aligned_cols=243  Identities=22%  Similarity=0.313  Sum_probs=181.8

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCC-CCCcceeeEEEe-------
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLR-HRNLMSLRAYVP-------  171 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~-------  171 (380)
                      ..+.||+|+||.||++.. .+|+.||+|++...        .....+.+.+|+.++.++. ||||+++++++.       
T Consensus        32 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--------~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~  103 (337)
T 3ll6_A           32 VRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN--------EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESD  103 (337)
T ss_dssp             EEEEEECCSSEEEEEEEETTTCCEEEEEEEEES--------SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTST
T ss_pred             EEEEEccCCceEEEEEEECCCCcEEEEEEecCC--------chHHHHHHHHHHHHHHHhccCCChhhccccccccccccc
Confidence            557899999999999996 47899999998651        2334577889999999995 999999999983       


Q ss_pred             -cCCeEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCC--eEecCCCCCcEEeCCCCceE
Q 047245          172 -ESSRFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQ--ILHYNLKPTNVMLDAEFTPR  248 (380)
Q Consensus       172 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--iiH~dlk~~Nill~~~~~~k  248 (380)
                       .....++|+||++ |+|.+++.... ....+++..++.++.|++.||+|||   +.+  ++||||||+|||++.++.+|
T Consensus       104 ~~~~~~~lv~e~~~-g~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~~k  178 (337)
T 3ll6_A          104 TGQAEFLLLTELCK-GQLVEFLKKME-SRGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIK  178 (337)
T ss_dssp             TSSEEEEEEEECCS-EEHHHHHHHHH-TTCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTSCEE
T ss_pred             cCCceEEEEEEecC-CCHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECCCCCEE
Confidence             3456899999996 79999987533 2446999999999999999999999   888  99999999999999999999


Q ss_pred             EeccCCcccCCC------------------CCcCCCcccCcccc---cCCCCCCcchhhHHHHHHHHHHhCCCCCCchhh
Q 047245          249 LADFGLAKLMPG------------------SLIATSAYSAPECF---QNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFA  307 (380)
Q Consensus       249 l~Dfgl~~~~~~------------------~~~~~~~y~aPE~~---~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~  307 (380)
                      |+|||+++....                  ...+++.|+|||.+   .+..++.++||||||+++|||++|+.||.....
T Consensus       179 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~  258 (337)
T 3ll6_A          179 LCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK  258 (337)
T ss_dssp             BCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----
T ss_pred             EecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhH
Confidence            999999986543                  22388899999998   567789999999999999999999999863100


Q ss_pred             hccCCCCHHHHHHHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          308 EAASGGSLGRWLRHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       308 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                      .                     +.+...... .........+.+++.+||+.||.+|||+.|+++.|+++.
T Consensus       259 ~---------------------~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~  307 (337)
T 3ll6_A          259 L---------------------RIVNGKYSI-PPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIA  307 (337)
T ss_dssp             ----------------------------CCC-CTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             H---------------------HhhcCcccC-CcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            0                     000000000 000112233778999999999999999999999998763


No 155
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00  E-value=1.1e-42  Score=328.01  Aligned_cols=241  Identities=22%  Similarity=0.295  Sum_probs=186.6

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHH-HHcCCCCCcceeeEEEecCCeEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEV-LASLRHRNLMSLRAYVPESSRFYL  178 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~l  178 (380)
                      ..+.||+|+||.||++... ++..||+|++......     .......+..|..+ ++.++||||+++++++.+.+..++
T Consensus        42 ~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~-----~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l  116 (373)
T 2r5t_A           42 FLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAIL-----KKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF  116 (373)
T ss_dssp             EEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC------------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred             EEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhh-----hhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence            4578999999999999974 5889999999763321     11223556667776 577899999999999999999999


Q ss_pred             EEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccC
Q 047245          179 VYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLM  258 (380)
Q Consensus       179 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~  258 (380)
                      ||||+++|+|.+++..    ...+++.....++.|++.||+|||   +.+++||||||+|||++.++.+||+|||+++..
T Consensus       117 v~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~  189 (373)
T 2r5t_A          117 VLDYINGGELFYHLQR----ERCFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKEN  189 (373)
T ss_dssp             EEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCGGG
T ss_pred             EEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCcccccc
Confidence            9999999999999974    346889999999999999999999   899999999999999999999999999999752


Q ss_pred             C------CCCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhh
Q 047245          259 P------GSLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREAL  332 (380)
Q Consensus       259 ~------~~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  332 (380)
                      .      ....||+.|+|||.+.+..++.++|+||||+++|||++|..||...        ............       
T Consensus       190 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~--------~~~~~~~~i~~~-------  254 (373)
T 2r5t_A          190 IEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR--------NTAEMYDNILNK-------  254 (373)
T ss_dssp             BCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS--------BHHHHHHHHHHS-------
T ss_pred             ccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCC--------CHHHHHHHHHhc-------
Confidence            2      2346899999999999999999999999999999999999998631        112222222211       


Q ss_pred             chhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHH
Q 047245          333 DRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPM  373 (380)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~  373 (380)
                        ..   ..+......+.+++.+||+.||.+||++.+.++.
T Consensus       255 --~~---~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~  290 (373)
T 2r5t_A          255 --PL---QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFME  290 (373)
T ss_dssp             --CC---CCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHH
T ss_pred             --cc---CCCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHH
Confidence              11   1112234557899999999999999998654433


No 156
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00  E-value=5.1e-43  Score=319.47  Aligned_cols=248  Identities=27%  Similarity=0.387  Sum_probs=191.5

Q ss_pred             cccccCccCCeeEEEEEec--CCc--EEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeE
Q 047245          101 ENRLLGSSPDGKYYRTVLD--NGL--TVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRF  176 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~--~g~--~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  176 (380)
                      ..+.||+|+||.||++...  ++.  .||+|++.....     ......+.+.+|+.++++++||||+++++++.+.. .
T Consensus        22 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~   95 (291)
T 1u46_A           22 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVL-----SQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M   95 (291)
T ss_dssp             EEEECC----CCCEEEEEECTTSCEEEEEEEC-------------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred             eeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCcc-----CCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence            4578999999999999853  333  689998865221     12234578899999999999999999999998765 8


Q ss_pred             EEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcc
Q 047245          177 YLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAK  256 (380)
Q Consensus       177 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~  256 (380)
                      ++|+||+++|+|.+++...   ...+++..+..++.|++.||+|||   +.+++||||||+||+++.++.+||+|||++.
T Consensus        96 ~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~  169 (291)
T 1u46_A           96 KMVTELAPLGSLLDRLRKH---QGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMR  169 (291)
T ss_dssp             EEEEECCTTCBHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred             eeeEecccCCCHHHHHHhc---cCCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEccccccc
Confidence            9999999999999999742   346899999999999999999999   8899999999999999999999999999997


Q ss_pred             cCCCC---------CcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhccCCCCHHHHHHHHHhhc
Q 047245          257 LMPGS---------LIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEAASGGSLGRWLRHLQHAG  326 (380)
Q Consensus       257 ~~~~~---------~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~l~~~~~~~~~~~  326 (380)
                      .....         ..++..|+|||.+.+..++.++||||||+++|||++ |..||...        .............
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--------~~~~~~~~~~~~~  241 (291)
T 1u46_A          170 ALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL--------NGSQILHKIDKEG  241 (291)
T ss_dssp             ECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTC--------CHHHHHHHHHTSC
T ss_pred             cccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccC--------CHHHHHHHHHccC
Confidence            65432         236778999999998889999999999999999999 99998631        1122222222111


Q ss_pred             chhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          327 EAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                      .          ....+......+.+++.+||+.||++|||+.++++.|+++.
T Consensus       242 ~----------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  283 (291)
T 1u46_A          242 E----------RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ  283 (291)
T ss_dssp             C----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             C----------CCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhC
Confidence            0          01111234456889999999999999999999999998864


No 157
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=6.6e-43  Score=326.68  Aligned_cols=250  Identities=20%  Similarity=0.278  Sum_probs=192.0

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++.. .++..||+|++.....   ........+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        30 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  106 (345)
T 3hko_A           30 LKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKI---RQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLV  106 (345)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH---HC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ecceeeecCCeEEEEEEECCCCceEEEeehhhhhh---cccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEE
Confidence            567899999999999987 5688999999875211   001223457889999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhc------------------------------------ccCCCHHHHHHHHHHHHHHHHHhHh
Q 047245          180 YDYLQTGSLEDAMDRIREN------------------------------------QLQLGWEVRLRIAVGVIKGLQYLHF  223 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~------------------------------------~~~l~~~~~~~i~~~ia~~l~~LH~  223 (380)
                      |||+++|+|.+++......                                    ...+++..+..++.|++.||+||| 
T Consensus       107 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH-  185 (345)
T 3hko_A          107 MELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH-  185 (345)
T ss_dssp             EECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred             EeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH-
Confidence            9999999999998521100                                    112356678899999999999999 


Q ss_pred             cCCCCeEecCCCCCcEEeCCCC--ceEEeccCCcccCC----------CCCcCCCcccCcccccC--CCCCCcchhhHHH
Q 047245          224 TCNPQILHYNLKPTNVMLDAEF--TPRLADFGLAKLMP----------GSLIATSAYSAPECFQN--RSYTDKSDIFSFG  289 (380)
Q Consensus       224 ~~~~~iiH~dlk~~Nill~~~~--~~kl~Dfgl~~~~~----------~~~~~~~~y~aPE~~~~--~~~~~~sDv~s~G  289 (380)
                        +.+++||||||+||+++.++  .+||+|||+++...          ....+|+.|+|||.+.+  ..++.++||||||
T Consensus       186 --~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG  263 (345)
T 3hko_A          186 --NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAG  263 (345)
T ss_dssp             --HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHH
T ss_pred             --HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHH
Confidence              88999999999999998776  89999999997532          13358999999999975  6789999999999


Q ss_pred             HHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHh
Q 047245          290 MILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDE  369 (380)
Q Consensus       290 vil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~e  369 (380)
                      +++|||++|+.||...        ...+...........        ............+.+++.+||+.||.+|||+.|
T Consensus       264 ~il~el~~g~~pf~~~--------~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~  327 (345)
T 3hko_A          264 VLLHLLLMGAVPFPGV--------NDADTISQVLNKKLC--------FENPNYNVLSPLARDLLSNLLNRNVDERFDAMR  327 (345)
T ss_dssp             HHHHHHHHSSCSSCCS--------SHHHHHHHHHHCCCC--------TTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHH
T ss_pred             HHHHHHHHCCCCCCCC--------ChHHHHHHHHhcccc--------cCCcccccCCHHHHHHHHHHcCCChhHCCCHHH
Confidence            9999999999998642        111112222211100        001111123456889999999999999999999


Q ss_pred             HHH
Q 047245          370 LVP  372 (380)
Q Consensus       370 vl~  372 (380)
                      +++
T Consensus       328 ~l~  330 (345)
T 3hko_A          328 ALQ  330 (345)
T ss_dssp             HHH
T ss_pred             Hhc
Confidence            986


No 158
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00  E-value=3.9e-42  Score=315.93  Aligned_cols=241  Identities=21%  Similarity=0.352  Sum_probs=195.1

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++... +|+.||+|.+....        ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        13 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (304)
T 2jam_A           13 FMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP--------AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLV   84 (304)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             eeeeccCCCCceEEEEEECCCCCEEEEEEEeccc--------ccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEE
Confidence            5578999999999999974 78999999997521        11235688999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEe---CCCCceEEeccCCcc
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVML---DAEFTPRLADFGLAK  256 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill---~~~~~~kl~Dfgl~~  256 (380)
                      |||+++|+|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+||++   ++++.+||+|||++.
T Consensus        85 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~  157 (304)
T 2jam_A           85 MQLVSGGELFDRILE----RGVYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSK  157 (304)
T ss_dssp             ECCCCSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTC
T ss_pred             EEcCCCccHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCcce
Confidence            999999999999874    346899999999999999999999   8899999999999999   788999999999998


Q ss_pred             cCCCCC----cCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhh
Q 047245          257 LMPGSL----IATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREAL  332 (380)
Q Consensus       257 ~~~~~~----~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  332 (380)
                      ......    .+++.|+|||.+.+..++.++||||||+++|||++|..||...        ..............     
T Consensus       158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--------~~~~~~~~i~~~~~-----  224 (304)
T 2jam_A          158 MEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEE--------TESKLFEKIKEGYY-----  224 (304)
T ss_dssp             CCCCBTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTS--------CHHHHHHHHHHCCC-----
T ss_pred             ecCCCccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCC--------CHHHHHHHHHcCCC-----
Confidence            655432    3899999999999999999999999999999999999998631        11112222111110     


Q ss_pred             chhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          333 DRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      .  . ...........+.+++.+||+.||++|||++|+++
T Consensus       225 ~--~-~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (304)
T 2jam_A          225 E--F-ESPFWDDISESAKDFICHLLEKDPNERYTCEKALS  261 (304)
T ss_dssp             C--C-CTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             C--C-CccccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            0  0 01111223456889999999999999999999985


No 159
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00  E-value=2.9e-43  Score=335.75  Aligned_cols=243  Identities=21%  Similarity=0.297  Sum_probs=193.8

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++... +++.||+|++.....     ........+.+|+.+++.++||||+++++++.+.+..++|
T Consensus        73 ~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~-----~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV  147 (410)
T 3v8s_A           73 VVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEM-----IKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMV  147 (410)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-----HHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             EEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhh-----hhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence            4578999999999999974 588999999965210     0011124577899999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||+++|+|.+++..     ..+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||+++...
T Consensus       148 ~E~~~gg~L~~~l~~-----~~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~  219 (410)
T 3v8s_A          148 MEYMPGGDLVNLMSN-----YDVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN  219 (410)
T ss_dssp             ECCCTTEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EeCCCCCcHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEeccceeEeec
Confidence            999999999999863     35889999999999999999999   8999999999999999999999999999997654


Q ss_pred             C-------CCcCCCcccCcccccCCC----CCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcch
Q 047245          260 G-------SLIATSAYSAPECFQNRS----YTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEA  328 (380)
Q Consensus       260 ~-------~~~~~~~y~aPE~~~~~~----~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~  328 (380)
                      .       ...||+.|+|||.+.+..    ++.++||||||+++|||++|+.||...        +............. 
T Consensus       220 ~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~--------~~~~~~~~i~~~~~-  290 (410)
T 3v8s_A          220 KEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD--------SLVGTYSKIMNHKN-  290 (410)
T ss_dssp             TTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCS--------SHHHHHHHHHTHHH-
T ss_pred             cCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCC--------ChhhHHHHHHhccc-
Confidence            3       345999999999998765    789999999999999999999999631        22222222221100 


Q ss_pred             hHhhchhccCCcccHHHHHHHHHHHHHcccCCCCC--CCCHHhHHH
Q 047245          329 REALDRSILGEEVEEDEMLMAVRIAVVCLSDSPAD--RPSSDELVP  372 (380)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~--RPs~~evl~  372 (380)
                        .+.  .  . ........+.+++.+|++.+|.+  ||+++|+++
T Consensus       291 --~~~--~--p-~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~  329 (410)
T 3v8s_A          291 --SLT--F--P-DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR  329 (410)
T ss_dssp             --HCC--C--C-TTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred             --ccc--C--C-CcccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence              000  0  0 00123456789999999999988  999999874


No 160
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00  E-value=2.4e-42  Score=339.12  Aligned_cols=242  Identities=19%  Similarity=0.285  Sum_probs=196.2

Q ss_pred             cccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEEEe
Q 047245          103 RLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLVYD  181 (380)
Q Consensus       103 ~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  181 (380)
                      ++||+|+||.||++.. .+|+.||+|++.....     ........+.+|+.++++++||||+++++++.+.+..++|||
T Consensus       191 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~-----~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE  265 (543)
T 3c4z_A          191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRL-----KKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMT  265 (543)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             EEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHh-----hhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEE
Confidence            5699999999999997 4699999999965211     111223678899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCCC-
Q 047245          182 YLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMPG-  260 (380)
Q Consensus       182 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~-  260 (380)
                      |+++|+|.+++.........+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||+++.... 
T Consensus       266 ~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~  342 (543)
T 3c4z_A          266 IMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG  342 (543)
T ss_dssp             CCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             eccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeeeccCC
Confidence            99999999999754333557999999999999999999999   89999999999999999999999999999976542 


Q ss_pred             -----CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhhchh
Q 047245          261 -----SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREALDRS  335 (380)
Q Consensus       261 -----~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  335 (380)
                           ...||+.|+|||.+.+..++.++|||||||++|||++|..||...    .................         
T Consensus       343 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~----~~~~~~~~~~~~i~~~~---------  409 (543)
T 3c4z_A          343 QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR----GEKVENKELKQRVLEQA---------  409 (543)
T ss_dssp             CCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCT----TCCCCHHHHHHHHHHCC---------
T ss_pred             CcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCC----ccchhHHHHHHHHhhcc---------
Confidence                 236999999999999999999999999999999999999998642    11112222222222111         


Q ss_pred             ccCCcccHHHHHHHHHHHHHcccCCCCCCCCHH
Q 047245          336 ILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSD  368 (380)
Q Consensus       336 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~  368 (380)
                         ...+......+.+++.+||+.||++||++.
T Consensus       410 ---~~~p~~~s~~~~~li~~lL~~dP~~R~~~~  439 (543)
T 3c4z_A          410 ---VTYPDKFSPASKDFCEALLQKDPEKRLGFR  439 (543)
T ss_dssp             ---CCCCTTSCHHHHHHHHHHSCSSGGGSCCCB
T ss_pred             ---cCCCcccCHHHHHHHHHhccCCHhHCCCCc
Confidence               011123445678999999999999999763


No 161
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.4e-42  Score=330.81  Aligned_cols=261  Identities=21%  Similarity=0.304  Sum_probs=203.4

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCC--eEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESS--RFY  177 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~  177 (380)
                      ..+.||+|+||.||+|... +|+.||+|++.....       ....+.+.+|++++++++||||+++++++.+.+  ..+
T Consensus        13 i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~   85 (396)
T 4eut_A           13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-------LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV   85 (396)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-------GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred             EEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc-------cchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeE
Confidence            4578999999999999975 589999999975221       112366788999999999999999999998755  789


Q ss_pred             EEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEe----CCCCceEEeccC
Q 047245          178 LVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVML----DAEFTPRLADFG  253 (380)
Q Consensus       178 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill----~~~~~~kl~Dfg  253 (380)
                      +||||+++|+|.+++.... ....+++..++.++.|++.||+|||   +.+++||||||+|||+    +.++.+||+|||
T Consensus        86 lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG  161 (396)
T 4eut_A           86 LIMEFCPCGSLYTVLEEPS-NAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG  161 (396)
T ss_dssp             EEECCCTTEEHHHHTTSGG-GTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGG
T ss_pred             EEEecCCCCCHHHHHHhhh-cccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCC
Confidence            9999999999999997532 2334899999999999999999999   8999999999999999    778889999999


Q ss_pred             CcccCCC-----CCcCCCcccCcccccC--------CCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHH
Q 047245          254 LAKLMPG-----SLIATSAYSAPECFQN--------RSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLR  320 (380)
Q Consensus       254 l~~~~~~-----~~~~~~~y~aPE~~~~--------~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~  320 (380)
                      +++....     ...||+.|+|||.+.+        ..++.++||||||+++|||++|+.||......    ....+...
T Consensus       162 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~----~~~~~~~~  237 (396)
T 4eut_A          162 AARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGP----RRNKEVMY  237 (396)
T ss_dssp             GCEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCT----TTCHHHHH
T ss_pred             CceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcc----cchHHHHH
Confidence            9986543     2458999999999865        56788999999999999999999998642111    11122222


Q ss_pred             HHHhhcchhHhhc--------------hhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhcc
Q 047245          321 HLQHAGEAREALD--------------RSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQL  377 (380)
Q Consensus       321 ~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l  377 (380)
                      ....... ...+.              ..-............+.+++.+||+.||++|||++|+++.++++
T Consensus       238 ~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~i  307 (396)
T 4eut_A          238 KIITGKP-SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI  307 (396)
T ss_dssp             HHHHSCC-TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred             HHhcCCC-cccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHH
Confidence            2222111 00000              00001123466778889999999999999999999999988876


No 162
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00  E-value=4.7e-42  Score=315.99  Aligned_cols=255  Identities=22%  Similarity=0.293  Sum_probs=190.0

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcC---CCCCcceeeEEEecCC--
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASL---RHRNLMSLRAYVPESS--  174 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~--  174 (380)
                      ..+.||+|+||.||++.. .+|+.||+|++...........   ....+.+|+.+++++   +||||+++++++....  
T Consensus        13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~---~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~   89 (308)
T 3g33_A           13 PVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGG---LPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTD   89 (308)
T ss_dssp             EEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSC---CCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSS
T ss_pred             EEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccc---cchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCC
Confidence            457899999999999996 5789999999976432211111   113455666666666   5999999999997755  


Q ss_pred             ---eEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEec
Q 047245          175 ---RFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLAD  251 (380)
Q Consensus       175 ---~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~D  251 (380)
                         ..++||||++ |+|.+++..  .....+++..+..++.|++.||+|||   +.+++||||||+||+++.++.+||+|
T Consensus        90 ~~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~D  163 (308)
T 3g33_A           90 REIKVTLVFEHVD-QDLRTYLDK--APPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLAD  163 (308)
T ss_dssp             SEEEEEEEEECCC-CBHHHHHHT--CCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTSCEEECS
T ss_pred             CceeEEEEehhhh-cCHHHHHhh--ccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEEee
Confidence               5799999997 599999974  22334899999999999999999999   88999999999999999999999999


Q ss_pred             cCCcccCCCC-----CcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhh-
Q 047245          252 FGLAKLMPGS-----LIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHA-  325 (380)
Q Consensus       252 fgl~~~~~~~-----~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~-  325 (380)
                      ||+++.....     ..+|+.|+|||.+.+..++.++||||||+++|||++|+.||....        ..+........ 
T Consensus       164 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~--------~~~~~~~i~~~~  235 (308)
T 3g33_A          164 FGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS--------EADQLGKIFDLI  235 (308)
T ss_dssp             CSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSS--------HHHHHHHHHHHH
T ss_pred             CccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHHHh
Confidence            9999865432     358999999999999999999999999999999999999986421        11111111100 


Q ss_pred             --cchhHh----------hchhccCC--cccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          326 --GEAREA----------LDRSILGE--EVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       326 --~~~~~~----------~~~~~~~~--~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                        .....+          +.+.....  ....+....+.+++.+||+.||++|||+.|+++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  296 (308)
T 3g33_A          236 GLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ  296 (308)
T ss_dssp             CCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence              000000          00000000  000123456789999999999999999999875


No 163
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00  E-value=7.6e-42  Score=318.46  Aligned_cols=240  Identities=22%  Similarity=0.337  Sum_probs=197.7

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++... +++.+|+|.+......     .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        45 ~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~-----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  119 (335)
T 2owb_A           45 RGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLL-----KPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV  119 (335)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC-----SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             EEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhc-----CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence            4578999999999999974 5789999998753221     234457889999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||+++++|.+++..    ...+++..++.++.|++.||+|||   +.+++||||||+||+++.++.+||+|||++....
T Consensus       120 ~e~~~~~~L~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~  192 (335)
T 2owb_A          120 LELCRRRSLLELHKR----RKALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE  192 (335)
T ss_dssp             ECCCTTCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EecCCCCCHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCceecc
Confidence            999999999998864    346899999999999999999999   8899999999999999999999999999997653


Q ss_pred             C------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhhc
Q 047245          260 G------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREALD  333 (380)
Q Consensus       260 ~------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  333 (380)
                      .      ...+++.|+|||.+.+..++.++||||||+++|||++|..||...        ...+.........       
T Consensus       193 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--------~~~~~~~~~~~~~-------  257 (335)
T 2owb_A          193 YDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS--------CLKETYLRIKKNE-------  257 (335)
T ss_dssp             STTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCS--------SHHHHHHHHHHTC-------
T ss_pred             cCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCC--------CHHHHHHHHhcCC-------
Confidence            2      235899999999999999999999999999999999999998631        1112111111110       


Q ss_pred             hhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          334 RSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      .     ..+......+.+++.+||+.||++|||++|+++
T Consensus       258 ~-----~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  291 (335)
T 2owb_A          258 Y-----SIPKHINPVAASLIQKMLQTDPTARPTINELLN  291 (335)
T ss_dssp             C-----CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             C-----CCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            0     011123345788999999999999999999985


No 164
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00  E-value=2.2e-42  Score=325.88  Aligned_cols=239  Identities=17%  Similarity=0.187  Sum_probs=193.1

Q ss_pred             cccccCccCCeeEEEEE------ecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCC---CCCcceeeEEEe
Q 047245          101 ENRLLGSSPDGKYYRTV------LDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLR---HRNLMSLRAYVP  171 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~------~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~  171 (380)
                      ..+.||+|+||.||+|.      ..+++.||+|++....           ..++..|++++.+++   |+||+.+++++.
T Consensus        69 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-----------~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~  137 (365)
T 3e7e_A           69 VHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN-----------PWEFYIGTQLMERLKPSMQHMFMKFYSAHL  137 (365)
T ss_dssp             EEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC-----------HHHHHHHHHHHHHSCGGGGGGBCCEEEEEE
T ss_pred             EEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC-----------hhHHHHHHHHHHHhhhhhhhhhhhhheeee
Confidence            45689999999999994      4578999999986411           256778888888886   999999999999


Q ss_pred             cCCeEEEEEeecCCCCHHHHHHHhhh-cccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCC-------
Q 047245          172 ESSRFYLVYDYLQTGSLEDAMDRIRE-NQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDA-------  243 (380)
Q Consensus       172 ~~~~~~lv~e~~~~gsL~~~l~~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~-------  243 (380)
                      ..+..++||||+++|+|.+++..... ....+++..++.++.|++.||+|||   +.+|+||||||+|||++.       
T Consensus       138 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~~~  214 (365)
T 3e7e_A          138 FQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDD  214 (365)
T ss_dssp             CSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC--
T ss_pred             cCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccCccc
Confidence            99999999999999999999986443 2457999999999999999999999   899999999999999998       


Q ss_pred             ----CCceEEeccCCcccCC--------CCCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccC
Q 047245          244 ----EFTPRLADFGLAKLMP--------GSLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAAS  311 (380)
Q Consensus       244 ----~~~~kl~Dfgl~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~  311 (380)
                          ++.+||+|||+++...        ....||+.|+|||.+.+..++.++||||||+++|||++|+.||.......  
T Consensus       215 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~--  292 (365)
T 3e7e_A          215 EDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE--  292 (365)
T ss_dssp             ----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE--
T ss_pred             cccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc--
Confidence                8999999999996432        23458999999999999999999999999999999999999985421110  


Q ss_pred             CCCHHHHHHHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCC-CCHHhHHHHHhcc
Q 047245          312 GGSLGRWLRHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADR-PSSDELVPMLTQL  377 (380)
Q Consensus       312 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~R-Ps~~evl~~L~~l  377 (380)
                                        ..+..... ...   ....+.+++..|++.+|.+| |+++++.+.|+++
T Consensus       293 ------------------~~~~~~~~-~~~---~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~  337 (365)
T 3e7e_A          293 ------------------CKPEGLFR-RLP---HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKV  337 (365)
T ss_dssp             ------------------EEECSCCT-TCS---SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHH
T ss_pred             ------------------eeechhcc-ccC---cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHH
Confidence                              00111111 111   13346678899999999999 6778888877754


No 165
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00  E-value=7.3e-42  Score=310.99  Aligned_cols=240  Identities=20%  Similarity=0.346  Sum_probs=196.5

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++... ++..||+|++.....     ........+.+|+.++++++||||+++++++.+.+..++|
T Consensus        18 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   92 (284)
T 2vgo_A           18 IGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQL-----EKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM   92 (284)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             eeheecCCCCeEEEEEEEcCCCcEEEEEEEccccc-----chHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence            4578999999999999974 578999999865210     1112236788999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||+++|+|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+||+++.++.+||+|||++....
T Consensus        93 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~  165 (284)
T 2vgo_A           93 LEFAPRGELYKELQK----HGRFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP  165 (284)
T ss_dssp             ECCCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEECS
T ss_pred             EEeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccCc
Confidence            999999999999975    346899999999999999999999   9999999999999999999999999999986544


Q ss_pred             C----CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhhchh
Q 047245          260 G----SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREALDRS  335 (380)
Q Consensus       260 ~----~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  335 (380)
                      .    ...+++.|+|||.+.+..++.++||||||+++|||++|..||...        ............       +. 
T Consensus       166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--------~~~~~~~~~~~~-------~~-  229 (284)
T 2vgo_A          166 SLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSP--------SHTETHRRIVNV-------DL-  229 (284)
T ss_dssp             SSCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCS--------SHHHHHHHHHTT-------CC-
T ss_pred             ccccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCC--------CHhHHHHHHhcc-------cc-
Confidence            3    345899999999999999999999999999999999999998641        111111111110       01 


Q ss_pred             ccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          336 ILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       336 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                          ..+......+.+++.+|++.||.+|||++|+++
T Consensus       230 ----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~  262 (284)
T 2vgo_A          230 ----KFPPFLSDGSKDLISKLLRYHPPQRLPLKGVME  262 (284)
T ss_dssp             ----CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ----CCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence                111223455789999999999999999999975


No 166
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00  E-value=2.6e-42  Score=315.40  Aligned_cols=242  Identities=21%  Similarity=0.361  Sum_probs=192.6

Q ss_pred             ccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEEE
Q 047245          102 NRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLVY  180 (380)
Q Consensus       102 ~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  180 (380)
                      ..+||+|+||.||+|.. .++..||+|.+....        ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus        27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--------~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   98 (295)
T 2clq_A           27 RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD--------SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFM   98 (295)
T ss_dssp             BCEEEECSSSEEEEEEETTTCCEEEEEEEECCC--------C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cEEEeecCcEEEEEEEECCCCeEEEEEEccCCc--------hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEE
Confidence            34899999999999996 568899999987521        223467889999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCC-CCceEEeccCCcccCC
Q 047245          181 DYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDA-EFTPRLADFGLAKLMP  259 (380)
Q Consensus       181 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~-~~~~kl~Dfgl~~~~~  259 (380)
                      ||+++++|.+++... .....+++..+..++.|++.||+|||   +.+++||||||+||+++. ++.+||+|||++....
T Consensus        99 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~  174 (295)
T 2clq_A           99 EQVPGGSLSALLRSK-WGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA  174 (295)
T ss_dssp             ECCSEEEHHHHHHHT-TCCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESC
T ss_pred             EeCCCCCHHHHHHhh-ccCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccC
Confidence            999999999999752 22345678899999999999999999   889999999999999987 8999999999997654


Q ss_pred             C------CCcCCCcccCcccccCCC--CCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHh
Q 047245          260 G------SLIATSAYSAPECFQNRS--YTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREA  331 (380)
Q Consensus       260 ~------~~~~~~~y~aPE~~~~~~--~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  331 (380)
                      .      ...+++.|+|||.+.+..  ++.++||||||+++|||++|+.||......      .........      ..
T Consensus       175 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~~~~~------~~  242 (295)
T 2clq_A          175 GINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEP------QAAMFKVGM------FK  242 (295)
T ss_dssp             C-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSH------HHHHHHHHH------HC
T ss_pred             CCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCch------hHHHHhhcc------cc
Confidence            2      345889999999997654  789999999999999999999998531100      000000000      00


Q ss_pred             hchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          332 LDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      ..     ...+......+.+++.+||+.||++|||+.|+++
T Consensus       243 ~~-----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          243 VH-----PEIPESMSAEAKAFILKCFEPDPDKRACANDLLV  278 (295)
T ss_dssp             CC-----CCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred             cc-----ccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            01     1112233456789999999999999999999974


No 167
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00  E-value=8.7e-43  Score=323.65  Aligned_cols=249  Identities=21%  Similarity=0.340  Sum_probs=196.5

Q ss_pred             cccccCccCCeeEEEEEe------cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCC
Q 047245          101 ENRLLGSSPDGKYYRTVL------DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESS  174 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  174 (380)
                      ..+.||+|+||.||+|..      .++..||+|++...       ........+.+|+.++++++||||+++++++.+..
T Consensus        34 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  106 (327)
T 2yfx_A           34 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV-------CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL  106 (327)
T ss_dssp             EEEECC--CSSCEEEEEC--------CCEEEEEECCSS-------CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             EEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccc-------cchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC
Confidence            557899999999999984      35778999998641       12334467889999999999999999999999999


Q ss_pred             eEEEEEeecCCCCHHHHHHHhhhc---ccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCC---CCceE
Q 047245          175 RFYLVYDYLQTGSLEDAMDRIREN---QLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDA---EFTPR  248 (380)
Q Consensus       175 ~~~lv~e~~~~gsL~~~l~~~~~~---~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~---~~~~k  248 (380)
                      ..++||||+++|+|.+++......   ...+++..++.++.|++.||+|||   +.+++||||||+||+++.   +..+|
T Consensus       107 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~k  183 (327)
T 2yfx_A          107 PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAK  183 (327)
T ss_dssp             SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEE
T ss_pred             CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceEE
Confidence            999999999999999999863321   245899999999999999999999   889999999999999984   45699


Q ss_pred             EeccCCcccCC--------CCCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhccCCCCHHHHH
Q 047245          249 LADFGLAKLMP--------GSLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEAASGGSLGRWL  319 (380)
Q Consensus       249 l~Dfgl~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~l~~~~  319 (380)
                      |+|||+++...        ....+++.|+|||.+.+..++.++||||||+++|||++ |..||...        ......
T Consensus       184 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~--------~~~~~~  255 (327)
T 2yfx_A          184 IGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK--------SNQEVL  255 (327)
T ss_dssp             ECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--------CHHHHH
T ss_pred             ECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCc--------CHHHHH
Confidence            99999986421        22347889999999998899999999999999999998 98998531        111222


Q ss_pred             HHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          320 RHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                      ........           ...+......+.+++.+||+.||.+|||+.++++.|+.+.
T Consensus       256 ~~~~~~~~-----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~  303 (327)
T 2yfx_A          256 EFVTSGGR-----------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT  303 (327)
T ss_dssp             HHHHTTCC-----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHhcCCC-----------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHh
Confidence            22111110           0111223456889999999999999999999999998763


No 168
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00  E-value=9.1e-42  Score=311.95  Aligned_cols=248  Identities=20%  Similarity=0.235  Sum_probs=194.3

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEE-ecCCeEEE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYV-PESSRFYL  178 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~l  178 (380)
                      ..+.||+|+||.||++.. .+|+.||+|++......          ..+.+|+.+++.++|++++..++++ .+....++
T Consensus        13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----------~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l   82 (296)
T 3uzp_A           13 LGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH----------PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM   82 (296)
T ss_dssp             EEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC----------CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred             EEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch----------hHHHHHHHHHHHhhcCCCCCccccccCCCCceEE
Confidence            456899999999999996 67899999998652211          3578899999999988877666655 66778899


Q ss_pred             EEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeC---CCCceEEeccCCc
Q 047245          179 VYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLD---AEFTPRLADFGLA  255 (380)
Q Consensus       179 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~---~~~~~kl~Dfgl~  255 (380)
                      ||||+ +++|.+++..   ....+++..++.++.|++.||+|||   +.+++||||||+||+++   +++.+||+|||++
T Consensus        83 v~e~~-~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~  155 (296)
T 3uzp_A           83 VMELL-GPSLEDLFNF---CSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA  155 (296)
T ss_dssp             EEECC-CCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTC
T ss_pred             EEEec-CCCHHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCc
Confidence            99999 8999999974   2346999999999999999999999   89999999999999994   7889999999999


Q ss_pred             ccCCC-------------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHH
Q 047245          256 KLMPG-------------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHL  322 (380)
Q Consensus       256 ~~~~~-------------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~  322 (380)
                      +....             ...+++.|+|||.+.+..++.++||||||+++|||++|+.||.....  .............
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~~~~~~~~  233 (296)
T 3uzp_A          156 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKA--ATKRQKYERISEK  233 (296)
T ss_dssp             EECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCC--SSSSSHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCc--hhhhhhhhhhccc
Confidence            75432             23589999999999999999999999999999999999999864211  1111111111111


Q ss_pred             HhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhcc
Q 047245          323 QHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQL  377 (380)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l  377 (380)
                      ...... ..+     .    ...+..+.+++.+||+.||++|||++++++.|+++
T Consensus       234 ~~~~~~-~~~-----~----~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~  278 (296)
T 3uzp_A          234 KMSTPI-EVL-----C----KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL  278 (296)
T ss_dssp             HHHSCH-HHH-----T----TTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred             ccCCch-HHH-----H----hhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHH
Confidence            100000 000     0    11234588999999999999999999999999876


No 169
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00  E-value=9.2e-42  Score=310.02  Aligned_cols=247  Identities=21%  Similarity=0.340  Sum_probs=197.1

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++... +|+.||+|.+.........  .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus         9 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv   86 (283)
T 3bhy_A            9 MGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSR--RGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLI   86 (283)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCS--SSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccc--cchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEE
Confidence            4578999999999999975 6899999999764322111  111246788999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCC----ceEEeccCCc
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEF----TPRLADFGLA  255 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~----~~kl~Dfgl~  255 (380)
                      |||+++++|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+||+++.++    .+||+|||++
T Consensus        87 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~  159 (283)
T 3bhy_A           87 LELVSGGELFDFLAE----KESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA  159 (283)
T ss_dssp             EECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred             EeecCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEecccc
Confidence            999999999999974    346899999999999999999999   89999999999999998877    8999999999


Q ss_pred             ccCCC-----CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhH
Q 047245          256 KLMPG-----SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEARE  330 (380)
Q Consensus       256 ~~~~~-----~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  330 (380)
                      .....     ...+++.|+|||.+.+..++.++||||||+++|||++|..||...        ..............   
T Consensus       160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--------~~~~~~~~~~~~~~---  228 (283)
T 3bhy_A          160 HKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGE--------TKQETLTNISAVNY---  228 (283)
T ss_dssp             EECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS--------SHHHHHHHHHTTCC---
T ss_pred             eeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCc--------chHHHHHHhHhccc---
Confidence            86543     235889999999999999999999999999999999999998641        11111111111000   


Q ss_pred             hhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          331 ALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      .....     ........+.+++.+||+.||++|||+.|+++
T Consensus       229 ~~~~~-----~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  265 (283)
T 3bhy_A          229 DFDEE-----YFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE  265 (283)
T ss_dssp             CCCHH-----HHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             CCcch-----hcccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence            00000     00123445789999999999999999999986


No 170
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00  E-value=6.6e-42  Score=312.74  Aligned_cols=248  Identities=20%  Similarity=0.235  Sum_probs=193.6

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEE-ecCCeEEE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYV-PESSRFYL  178 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~l  178 (380)
                      ..+.||+|+||.||++.. .+++.||+|++.....          ...+.+|+.+++.++|+|++..++.+ .+.+..++
T Consensus        13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----------~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l   82 (296)
T 4hgt_A           13 LGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----------HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM   82 (296)
T ss_dssp             EEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-------------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred             EeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc----------chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEE
Confidence            457899999999999996 6789999998754221          13577899999999988877766655 66778899


Q ss_pred             EEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEe---CCCCceEEeccCCc
Q 047245          179 VYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVML---DAEFTPRLADFGLA  255 (380)
Q Consensus       179 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill---~~~~~~kl~Dfgl~  255 (380)
                      ||||+ +++|.+++..   ....+++..++.++.|++.||+|||   +.+++||||||+|||+   ++++.+||+|||++
T Consensus        83 v~e~~-~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a  155 (296)
T 4hgt_A           83 VMELL-GPSLEDLFNF---CSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA  155 (296)
T ss_dssp             EEECC-CCBHHHHHHH---TTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTC
T ss_pred             EEEcc-CCCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCccc
Confidence            99999 9999999874   2446999999999999999999999   8999999999999999   78899999999999


Q ss_pred             ccCCC-------------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHH
Q 047245          256 KLMPG-------------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHL  322 (380)
Q Consensus       256 ~~~~~-------------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~  322 (380)
                      +....             ...+|+.|+|||.+.+..++.++||||||+++|||++|+.||......  ............
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~  233 (296)
T 4hgt_A          156 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA--TKRQKYERISEK  233 (296)
T ss_dssp             EECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCS--SSSSHHHHHHHH
T ss_pred             eeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchh--hhhhhhhhhhcc
Confidence            75432             235899999999999999999999999999999999999999642111  111111111111


Q ss_pred             HhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhcc
Q 047245          323 QHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQL  377 (380)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l  377 (380)
                      ...... ..+     .    ...+..+.+++..||+.||++|||++++++.|+++
T Consensus       234 ~~~~~~-~~~-----~----~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~  278 (296)
T 4hgt_A          234 KMSTPI-EVL-----C----KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL  278 (296)
T ss_dssp             HHHSCH-HHH-----T----TTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred             cccchh-hhh-----h----ccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Confidence            100000 000     0    11235688999999999999999999999999876


No 171
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00  E-value=1.5e-42  Score=316.22  Aligned_cols=245  Identities=21%  Similarity=0.332  Sum_probs=185.4

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++.. .+|+.||+|++....      ......+.+.++...++.++||||+++++++.+.+..++|
T Consensus        11 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv   84 (290)
T 3fme_A           11 PIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATV------NSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC   84 (290)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEEC---------CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred             hHHhcCCCCCeEEEEEEecCCCeEEEEEEeeccc------CcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence            456899999999999997 578999999996521      1223334455566668888999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCC-CeEecCCCCCcEEeCCCCceEEeccCCcccC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNP-QILHYNLKPTNVMLDAEFTPRLADFGLAKLM  258 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~-~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~  258 (380)
                      |||++ |+|.+++.........+++..+..++.|++.||+|||   +. +++||||||+||+++.++.+||+|||+++..
T Consensus        85 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  160 (290)
T 3fme_A           85 MELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL  160 (290)
T ss_dssp             EECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred             Eehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence            99997 5999998865556678999999999999999999999   76 9999999999999999999999999999765


Q ss_pred             CCC-----CcCCCcccCcccc----cCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchh
Q 047245          259 PGS-----LIATSAYSAPECF----QNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAR  329 (380)
Q Consensus       259 ~~~-----~~~~~~y~aPE~~----~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~  329 (380)
                      ...     ..+++.|+|||.+    .+..++.++||||||+++|||++|..||...       ..............   
T Consensus       161 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~-------~~~~~~~~~~~~~~---  230 (290)
T 3fme_A          161 VDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSW-------GTPFQQLKQVVEEP---  230 (290)
T ss_dssp             ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCC-------SCHHHHHHHHHHSC---
T ss_pred             cccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCcccc-------CchHHHHHHHhccC---
Confidence            432     3589999999996    5567899999999999999999999998631       11111111111111   


Q ss_pred             HhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          330 EALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                         .+..    ........+.+++.+||+.||++|||++|+++
T Consensus       231 ---~~~~----~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          231 ---SPQL----PADKFSAEFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             ---CCCC----CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             ---CCCc----ccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence               0111    11223456889999999999999999999975


No 172
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00  E-value=5.4e-43  Score=336.36  Aligned_cols=246  Identities=19%  Similarity=0.269  Sum_probs=194.2

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..++||+|+||.||++... +++.||+|++.....     ........+.+|..++..++||||+++++++.+.+..++|
T Consensus        78 ~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~-----~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV  152 (437)
T 4aw2_A           78 ILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEM-----LKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLV  152 (437)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHH-----HHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEE
T ss_pred             EEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHh-----hhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEE
Confidence            4578999999999999975 478999999965210     0111123478899999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||+++|+|.+++..   ....+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||+++...
T Consensus       153 ~Ey~~gg~L~~~l~~---~~~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~  226 (437)
T 4aw2_A          153 MDYYVGGDLLTLLSK---FEDRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLM  226 (437)
T ss_dssp             ECCCTTCBHHHHHHT---TTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EecCCCCcHHHHHHH---ccCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEcchhhhhhcc
Confidence            999999999999973   2356999999999999999999999   8999999999999999999999999999997653


Q ss_pred             C-------CCcCCCcccCccccc-----CCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcc
Q 047245          260 G-------SLIATSAYSAPECFQ-----NRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGE  327 (380)
Q Consensus       260 ~-------~~~~~~~y~aPE~~~-----~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~  327 (380)
                      .       ...||+.|+|||.+.     ...++.++|||||||++|||++|+.||...        +..+......... 
T Consensus       227 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~--------~~~~~~~~i~~~~-  297 (437)
T 4aw2_A          227 EDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE--------SLVETYGKIMNHK-  297 (437)
T ss_dssp             TTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCS--------SHHHHHHHHHTHH-
T ss_pred             cCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCC--------ChhHHHHhhhhcc-
Confidence            2       246899999999997     567899999999999999999999999631        1122222221110 


Q ss_pred             hhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCC--CCCHHhHHH
Q 047245          328 AREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPAD--RPSSDELVP  372 (380)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~--RPs~~evl~  372 (380)
                        ..+.  .  ..........+.+++.+|++.+|++  ||+++|+++
T Consensus       298 --~~~~--~--p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~  338 (437)
T 4aw2_A          298 --ERFQ--F--PTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK  338 (437)
T ss_dssp             --HHCC--C--CSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred             --cccc--C--CcccccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence              0000  0  1110123455788999999888888  999999874


No 173
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00  E-value=3.8e-42  Score=311.28  Aligned_cols=241  Identities=22%  Similarity=0.329  Sum_probs=194.4

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++... +|+.||+|.+.....       ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus        11 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (276)
T 2yex_A           11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-------VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF   83 (276)
T ss_dssp             EEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC-------TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             EEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc-------hhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEE
Confidence            4568999999999999974 689999999975321       12346788999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      +||+++++|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+||+++.++.+||+|||++....
T Consensus        84 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~  156 (276)
T 2yex_A           84 LEYCSGGELFDRIEP----DIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFR  156 (276)
T ss_dssp             EECCTTEEGGGGSBT----TTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred             EEecCCCcHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccC
Confidence            999999999998863    346899999999999999999999   8999999999999999999999999999987542


Q ss_pred             --------CCCcCCCcccCcccccCCCC-CCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhH
Q 047245          260 --------GSLIATSAYSAPECFQNRSY-TDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEARE  330 (380)
Q Consensus       260 --------~~~~~~~~y~aPE~~~~~~~-~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  330 (380)
                              ....+++.|+|||.+.+..+ +.++||||||+++|||++|..||......      ...+.. .......  
T Consensus       157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~-~~~~~~~--  227 (276)
T 2yex_A          157 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS------CQEYSD-WKEKKTY--  227 (276)
T ss_dssp             ETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTT------SHHHHH-HHTTCTT--
T ss_pred             CCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchH------HHHHHH-hhhcccc--
Confidence                    23458999999999987765 77999999999999999999998642110      011111 1110000  


Q ss_pred             hhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          331 ALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                              ..........+.+++.+||+.||++|||++|+++
T Consensus       228 --------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  261 (276)
T 2yex_A          228 --------LNPWKKIDSAPLALLHKILVENPSARITIPDIKK  261 (276)
T ss_dssp             --------STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             --------cCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence                    0011123445788999999999999999999875


No 174
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=4.8e-42  Score=326.22  Aligned_cols=189  Identities=30%  Similarity=0.488  Sum_probs=155.9

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCC-CCCcceeeEEEecCC--eE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLR-HRNLMSLRAYVPESS--RF  176 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~--~~  176 (380)
                      ..+.||+|+||.||++.. .+|+.||+|++....      ......+.+.+|+.++.++. ||||+++++++...+  ..
T Consensus        13 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~------~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~   86 (388)
T 3oz6_A           13 LVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAF------QNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV   86 (388)
T ss_dssp             EEEC-------CEEEEEETTTCCEEEEEEECC--------CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred             EEEEeeeCCCeEEEEEEECCCCCEEEEEEecccc------cChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence            456899999999999986 578999999986421      22344577889999999997 999999999997543  78


Q ss_pred             EEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcc
Q 047245          177 YLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAK  256 (380)
Q Consensus       177 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~  256 (380)
                      ++||||++ |+|.+++..     ..+++..+..++.|++.||+|||   +.+++||||||+|||++.++.+||+|||+++
T Consensus        87 ~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~  157 (388)
T 3oz6_A           87 YLVFDYME-TDLHAVIRA-----NILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSR  157 (388)
T ss_dssp             EEEEECCS-EEHHHHHHH-----TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             EEEecccC-cCHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCCcccc
Confidence            99999997 599998873     36899999999999999999999   8999999999999999999999999999997


Q ss_pred             cCCC---------------------------CCcCCCcccCcccccC-CCCCCcchhhHHHHHHHHHHhCCCCCCc
Q 047245          257 LMPG---------------------------SLIATSAYSAPECFQN-RSYTDKSDIFSFGMILAVLLTGRDPTAP  304 (380)
Q Consensus       257 ~~~~---------------------------~~~~~~~y~aPE~~~~-~~~~~~sDv~s~Gvil~el~tg~~p~~~  304 (380)
                      ....                           ...||+.|+|||.+.+ ..++.++|||||||++|||++|+.||..
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~  233 (388)
T 3oz6_A          158 SFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPG  233 (388)
T ss_dssp             ESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             cccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCC
Confidence            5421                           2358999999999976 6789999999999999999999999964


No 175
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00  E-value=2.9e-42  Score=339.43  Aligned_cols=246  Identities=24%  Similarity=0.307  Sum_probs=197.6

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++.. .+|+.||+|++.....     ........+.+|+.++++++||||+++++++.+.+..++|
T Consensus       188 ~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~-----~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  262 (576)
T 2acx_A          188 QYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRI-----KKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV  262 (576)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhh-----hhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence            346899999999999997 4799999999965211     1112235678999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||+++|+|.+++..  .....+++..+..++.||+.||+|||   +.+|+||||||+|||++.++.+||+|||+++...
T Consensus       263 mEy~~gg~L~~~l~~--~~~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~  337 (576)
T 2acx_A          263 LTLMNGGDLKFHIYH--MGQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVP  337 (576)
T ss_dssp             ECCCCSCBHHHHHHS--SSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EEcCCCCcHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEecccceecc
Confidence            999999999999874  22345899999999999999999999   8899999999999999999999999999998764


Q ss_pred             C-----CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhhch
Q 047245          260 G-----SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREALDR  334 (380)
Q Consensus       260 ~-----~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  334 (380)
                      .     ...||+.|+|||.+.+..++.++|||||||++|||++|..||...    .................        
T Consensus       338 ~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~----~~~~~~~~i~~~i~~~~--------  405 (576)
T 2acx_A          338 EGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQR----KKKIKREEVERLVKEVP--------  405 (576)
T ss_dssp             TTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCS----SSCCCHHHHHHHHHHCC--------
T ss_pred             cCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCccc----ccchhHHHHHHHhhccc--------
Confidence            3     246899999999999999999999999999999999999998641    11111222222111110        


Q ss_pred             hccCCcccHHHHHHHHHHHHHcccCCCCCCC-----CHHhHHH
Q 047245          335 SILGEEVEEDEMLMAVRIAVVCLSDSPADRP-----SSDELVP  372 (380)
Q Consensus       335 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RP-----s~~evl~  372 (380)
                          ...+......+.+++.+||+.||.+||     +++|+++
T Consensus       406 ----~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~  444 (576)
T 2acx_A          406 ----EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE  444 (576)
T ss_dssp             ----CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred             ----ccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence                111122345688999999999999999     6777763


No 176
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00  E-value=3.3e-42  Score=323.95  Aligned_cols=258  Identities=23%  Similarity=0.387  Sum_probs=196.3

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++... +|..||+|++...       ......+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        37 ~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~-------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  109 (360)
T 3eqc_A           37 KISELGAGNGGVVFKVSHKPSGLVMARKLIHLE-------IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC  109 (360)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEEECC-------CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred             eeeeecCCCCeEEEEEEECCCCcEEEEEEeccc-------cCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEE
Confidence            3467999999999999974 6899999998752       1234457899999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCC-CeEecCCCCCcEEeCCCCceEEeccCCcccC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNP-QILHYNLKPTNVMLDAEFTPRLADFGLAKLM  258 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~-~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~  258 (380)
                      |||+++|+|.+++..    ...+++..+..++.|++.||+|||   +. +++||||||+||+++.++.+||+|||++...
T Consensus       110 ~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  182 (360)
T 3eqc_A          110 MEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL  182 (360)
T ss_dssp             ECCCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHH
T ss_pred             EECCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH---HhCCEEcCCccHHHEEECCCCCEEEEECCCCccc
Confidence            999999999999975    346899999999999999999999   64 8999999999999999999999999998643


Q ss_pred             ----CCCCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccC--------C-------------C
Q 047245          259 ----PGSLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAAS--------G-------------G  313 (380)
Q Consensus       259 ----~~~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~--------~-------------~  313 (380)
                          .....+++.|+|||.+.+..++.++||||||+++|||++|+.||.........        .             .
T Consensus       183 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (360)
T 3eqc_A          183 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR  262 (360)
T ss_dssp             HHHC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-------------------
T ss_pred             ccccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCC
Confidence                23456899999999999999999999999999999999999998642111000        0             0


Q ss_pred             CHHHHHHHHHhhcchhHhhchhccC---CcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          314 SLGRWLRHLQHAGEAREALDRSILG---EEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       314 ~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      ....+...........+.++.....   ..........+.+++.+||+.||++|||++|+++
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  324 (360)
T 3eqc_A          263 PLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV  324 (360)
T ss_dssp             -----------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             cccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence            0000000000001111111111100   1111123456889999999999999999999974


No 177
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00  E-value=2e-42  Score=331.83  Aligned_cols=249  Identities=23%  Similarity=0.362  Sum_probs=186.2

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||+|.. .+++.||+|++..................+.+|+.++++++||||+++++++.. +..++|
T Consensus       139 ~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~~lv  217 (419)
T 3i6u_A          139 MSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-EDYYIV  217 (419)
T ss_dssp             EEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-SEEEEE
T ss_pred             EEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-CceEEE
Confidence            567899999999999986 468899999997633221111122233468899999999999999999999864 568999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCC---CceEEeccCCcc
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAE---FTPRLADFGLAK  256 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~---~~~kl~Dfgl~~  256 (380)
                      |||+++|+|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+|||++.+   ..+||+|||+++
T Consensus       218 ~e~~~~g~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~  290 (419)
T 3i6u_A          218 LELMEGGELFDKVVG----NKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK  290 (419)
T ss_dssp             EECCTTCBGGGGTSS----SCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTT
T ss_pred             EEcCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcceEEEeecccce
Confidence            999999999888763    457999999999999999999999   8899999999999999754   459999999998


Q ss_pred             cCCCC-----CcCCCcccCcccccC---CCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcch
Q 047245          257 LMPGS-----LIATSAYSAPECFQN---RSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEA  328 (380)
Q Consensus       257 ~~~~~-----~~~~~~y~aPE~~~~---~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~  328 (380)
                      .....     ..||+.|+|||.+.+   ..++.++||||||+++|||++|..||...    .....+...+.    .+..
T Consensus       291 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~----~~~~~~~~~i~----~~~~  362 (419)
T 3i6u_A          291 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH----RTQVSLKDQIT----SGKY  362 (419)
T ss_dssp             SCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCC----SSSCCHHHHHH----TTCC
T ss_pred             ecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCC----cchHHHHHHHh----cCCC
Confidence            76532     358999999999863   66788999999999999999999998631    11111111111    0100


Q ss_pred             hHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          329 REALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      .  ..+.     ........+.+++.+||+.||++|||++|+++
T Consensus       363 ~--~~~~-----~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  399 (419)
T 3i6u_A          363 N--FIPE-----VWAEVSEKALDLVKKLLVVDPKARFTTEEALR  399 (419)
T ss_dssp             C--CCHH-----HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             C--CCch-----hhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence            0  0000     00123456889999999999999999999985


No 178
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00  E-value=1.9e-43  Score=334.55  Aligned_cols=237  Identities=17%  Similarity=0.212  Sum_probs=184.3

Q ss_pred             ccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHH---HHHHcCCCCCcceee-------EEE
Q 047245          102 NRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQEL---EVLASLRHRNLMSLR-------AYV  170 (380)
Q Consensus       102 ~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~---~~l~~l~h~niv~l~-------~~~  170 (380)
                      .+.||+|+||.||+|.. .+|+.||||++......     .....+.+.+|+   +.+++++||||++++       +++
T Consensus        78 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~  152 (377)
T 3byv_A           78 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERP-----PSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV  152 (377)
T ss_dssp             EEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-C-----CTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEE
T ss_pred             cceeecCCCEEEEEEEECCCCcEEEEEEEeecccc-----chHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhh
Confidence            47899999999999996 56999999999753222     122347788999   566666899999998       666


Q ss_pred             ecCC-----------------eEEEEEeecCCCCHHHHHHHhhhc---ccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeE
Q 047245          171 PESS-----------------RFYLVYDYLQTGSLEDAMDRIREN---QLQLGWEVRLRIAVGVIKGLQYLHFTCNPQIL  230 (380)
Q Consensus       171 ~~~~-----------------~~~lv~e~~~~gsL~~~l~~~~~~---~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ii  230 (380)
                      .+.+                 ..++||||+ +|+|.+++......   ...+++..++.++.|++.||+|||   +.+++
T Consensus       153 ~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~iv  228 (377)
T 3byv_A          153 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLV  228 (377)
T ss_dssp             ECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred             hccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCCee
Confidence            5543                 279999999 68999999853221   123456888999999999999999   88999


Q ss_pred             ecCCCCCcEEeCCCCceEEeccCCcccCCC---CCcCCCcccCcccccCC-----------CCCCcchhhHHHHHHHHHH
Q 047245          231 HYNLKPTNVMLDAEFTPRLADFGLAKLMPG---SLIATSAYSAPECFQNR-----------SYTDKSDIFSFGMILAVLL  296 (380)
Q Consensus       231 H~dlk~~Nill~~~~~~kl~Dfgl~~~~~~---~~~~~~~y~aPE~~~~~-----------~~~~~sDv~s~Gvil~el~  296 (380)
                      ||||||+|||++.++.+||+|||+++....   ...| +.|+|||.+.+.           .++.++||||||+++|||+
T Consensus       229 HrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~ell  307 (377)
T 3byv_A          229 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIW  307 (377)
T ss_dssp             CSCCCGGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHH
T ss_pred             cCCCCHHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHH
Confidence            999999999999999999999999986543   2346 999999999887           8999999999999999999


Q ss_pred             hCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          297 TGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       297 tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      +|+.||......                  ...+.+....  .    .....+.+++.+||+.||++|||+.|+++
T Consensus       308 tg~~Pf~~~~~~------------------~~~~~~~~~~--~----~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  359 (377)
T 3byv_A          308 CADLPITKDAAL------------------GGSEWIFRSC--K----NIPQPVRALLEGFLRYPKEDRLLPLQAME  359 (377)
T ss_dssp             HSSCCC------------------------CCSGGGGSSC--C----CCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred             HCCCCCcccccc------------------cchhhhhhhc--c----CCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence            999998531100                  0011111100  1    12345788999999999999999999985


No 179
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00  E-value=3.3e-42  Score=316.25  Aligned_cols=238  Identities=24%  Similarity=0.397  Sum_probs=195.9

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||+|.. .+|+.||+|++.....       ....+.+.+|+.++++++||||+++++++.+....++|
T Consensus        26 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   98 (303)
T 3a7i_A           26 KLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-------EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWII   98 (303)
T ss_dssp             EEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC-------STTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HhhhhcccCCeEEEEEEECCCCcEEEEEEeccccc-------HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEE
Confidence            456799999999999986 4689999999975321       12246788999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||+++++|.+++.     ...+++..+..++.|++.||+|||   +.+++||||||+||+++.++.+||+|||++....
T Consensus        99 ~e~~~~~~L~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~  170 (303)
T 3a7i_A           99 MEYLGGGSALDLLE-----PGPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT  170 (303)
T ss_dssp             EECCTTEEHHHHHT-----TSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECB
T ss_pred             EEeCCCCcHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecC
Confidence            99999999999986     346899999999999999999999   8899999999999999999999999999997654


Q ss_pred             C------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhhc
Q 047245          260 G------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREALD  333 (380)
Q Consensus       260 ~------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  333 (380)
                      .      ...+++.|+|||.+.+..++.++||||||+++|||++|..||...        .............      .
T Consensus       171 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--------~~~~~~~~~~~~~------~  236 (303)
T 3a7i_A          171 DTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL--------HPMKVLFLIPKNN------P  236 (303)
T ss_dssp             TTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--------CHHHHHHHHHHSC------C
T ss_pred             ccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCc--------CHHHHHHHhhcCC------C
Confidence            2      235889999999999999999999999999999999999998631        1111111111110      0


Q ss_pred             hhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          334 RSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      +     .........+.+++.+||+.||++|||+.|+++
T Consensus       237 ~-----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  270 (303)
T 3a7i_A          237 P-----TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK  270 (303)
T ss_dssp             C-----CCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             C-----CCccccCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            1     111123445889999999999999999999975


No 180
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00  E-value=4.1e-42  Score=319.73  Aligned_cols=259  Identities=23%  Similarity=0.371  Sum_probs=193.6

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++... +|+.||+|++....      ......+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        29 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  102 (331)
T 4aaa_A           29 NLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESD------DDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV  102 (331)
T ss_dssp             EEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCS------SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             eeeEEeecCCEEEEEEEECCCCceEEEEEEecCC------CchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence            3468999999999999974 58999999986522      2334457788999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||+++++|.++...    ...+++..+..++.|++.||+|||   +.+++||||||+||+++.++.+||+|||+++...
T Consensus       103 ~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  175 (331)
T 4aaa_A          103 FEFVDHTILDDLELF----PNGLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLA  175 (331)
T ss_dssp             EECCSEEHHHHHHHS----TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred             EecCCcchHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceeec
Confidence            999999999887652    446999999999999999999999   8999999999999999999999999999997643


Q ss_pred             C------CCcCCCcccCcccccCC-CCCCcchhhHHHHHHHHHHhCCCCCCchhhhccC-------CCCHHHHHHHHHhh
Q 047245          260 G------SLIATSAYSAPECFQNR-SYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAAS-------GGSLGRWLRHLQHA  325 (380)
Q Consensus       260 ~------~~~~~~~y~aPE~~~~~-~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~-------~~~l~~~~~~~~~~  325 (380)
                      .      ...+++.|+|||.+.+. .++.++||||||+++|||++|+.||.........       ......+.......
T Consensus       176 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (331)
T 4aaa_A          176 APGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKN  255 (331)
T ss_dssp             --------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHC
T ss_pred             CCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhc
Confidence            2      34589999999999875 7899999999999999999999998642111000       00000000000000


Q ss_pred             cchhHhhchhccCCcc----cHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          326 GEAREALDRSILGEEV----EEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       326 ~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      ........+.......    .......+.+++.+||+.||++|||++|+++
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  306 (331)
T 4aaa_A          256 PVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH  306 (331)
T ss_dssp             GGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             cccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            0000000000000000    0123566889999999999999999999874


No 181
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00  E-value=1.5e-41  Score=329.52  Aligned_cols=249  Identities=23%  Similarity=0.365  Sum_probs=188.2

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecC------
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPES------  173 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------  173 (380)
                      ..+.||+|+||.||++.. .+|+.||||++...      .......+.+.+|+.+++.++||||+++++++...      
T Consensus        66 ~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~------~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~  139 (464)
T 3ttj_A           66 NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP------FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF  139 (464)
T ss_dssp             EEEEEEECSSCEEEEEEETTTTEEEEEEEEESG------GGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred             EEEEeecCCCeEEEEEEECCCCCEEEEEEECcc------ccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence            346799999999999986 46899999999752      12344557888999999999999999999998654      


Q ss_pred             CeEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccC
Q 047245          174 SRFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFG  253 (380)
Q Consensus       174 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfg  253 (380)
                      ...++||||+++ +|.+.+.      ..+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||
T Consensus       140 ~~~~lv~E~~~~-~l~~~~~------~~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG  209 (464)
T 3ttj_A          140 QDVYLVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFG  209 (464)
T ss_dssp             CEEEEEEECCSE-EHHHHHT------SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCC
T ss_pred             CeEEEEEeCCCC-CHHHHHh------hcCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEE
Confidence            467999999976 5666664      24899999999999999999999   8899999999999999999999999999


Q ss_pred             CcccCCC-----CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcc-
Q 047245          254 LAKLMPG-----SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGE-  327 (380)
Q Consensus       254 l~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~-  327 (380)
                      +++....     ...||+.|+|||.+.+..++.++|||||||++|||++|+.||....       ....+.......+. 
T Consensus       210 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~-------~~~~~~~i~~~lg~p  282 (464)
T 3ttj_A          210 LARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD-------YIDQWNKVIEQLGTP  282 (464)
T ss_dssp             CC-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS-------HHHHHHHHHHHHCSC
T ss_pred             eeeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCC-------HHHHHHHHHHhcCCC
Confidence            9986543     2458999999999999999999999999999999999999996421       01111111100000 


Q ss_pred             --------------------------hhHhhchhccCC--cccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          328 --------------------------AREALDRSILGE--EVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       328 --------------------------~~~~~~~~~~~~--~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                                                ....+...+...  .........+.+|+.+||+.||++|||++|+++
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  355 (464)
T 3ttj_A          283 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ  355 (464)
T ss_dssp             CHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                                      000000000000  011223567899999999999999999999875


No 182
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.2e-41  Score=320.99  Aligned_cols=249  Identities=25%  Similarity=0.389  Sum_probs=187.9

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecC------
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPES------  173 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------  173 (380)
                      ..+.||+|+||.||++.. .+|+.||+|++....      ......+.+.+|+.++++++||||+++++++...      
T Consensus        29 ~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~------~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~  102 (367)
T 1cm8_A           29 DLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF------QSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF  102 (367)
T ss_dssp             EEEEC------CEEEEEETTTCCEEEEEECSSTT------SSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred             EeEEeeecCCeEEEEEEECCCCCEEEEEEeCccc------cCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence            346799999999999997 578999999986421      2334457889999999999999999999999765      


Q ss_pred             CeEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccC
Q 047245          174 SRFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFG  253 (380)
Q Consensus       174 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfg  253 (380)
                      ...++||||+ +++|.+++..     ..+++..+..++.|++.||+|||   +.+++||||||+||+++.++.+||+|||
T Consensus       103 ~~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg  173 (367)
T 1cm8_A          103 TDFYLVMPFM-GTDLGKLMKH-----EKLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFG  173 (367)
T ss_dssp             CCCEEEEECC-SEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred             ceEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeee
Confidence            3469999999 7899999873     46899999999999999999999   8999999999999999999999999999


Q ss_pred             CcccCCC---CCcCCCcccCcccccC-CCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHH-hhcch
Q 047245          254 LAKLMPG---SLIATSAYSAPECFQN-RSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQ-HAGEA  328 (380)
Q Consensus       254 l~~~~~~---~~~~~~~y~aPE~~~~-~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~-~~~~~  328 (380)
                      +++....   ...+|+.|+|||.+.+ ..++.++||||+||++|||++|+.||....        ..+...... ..+..
T Consensus       174 ~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--------~~~~l~~i~~~~g~~  245 (367)
T 1cm8_A          174 LARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSD--------HLDQLKEIMKVTGTP  245 (367)
T ss_dssp             TCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHHHCCC
T ss_pred             cccccccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHHhcCCC
Confidence            9987643   3458999999999887 679999999999999999999999986421        111111110 00000


Q ss_pred             hH-------------hhc--hhccCC---cccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          329 RE-------------ALD--RSILGE---EVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       329 ~~-------------~~~--~~~~~~---~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      ..             .+.  +.....   .........+.+++.+||+.||++|||++|+++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~  307 (367)
T 1cm8_A          246 PAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA  307 (367)
T ss_dssp             CHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence            00             000  000000   011123456889999999999999999999986


No 183
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00  E-value=1.2e-41  Score=308.22  Aligned_cols=240  Identities=25%  Similarity=0.400  Sum_probs=190.2

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++... +|+.||+|.+....     .......+.+.+|+..++.++||||+++++++.+.+..++|
T Consensus        15 i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (276)
T 2h6d_A           15 LGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQK-----IRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV   89 (276)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             EEeeecCCCCeEEEEEEECCCCceEEEEEecccc-----ccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence            3468999999999999975 78999999986521     01112346788999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||+++++|.+++..    ...+++..+..++.|++.||+|||   +.+++|+||||+||+++.++.+||+|||++....
T Consensus        90 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~  162 (276)
T 2h6d_A           90 MEYVSGGELFDYICK----HGRVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS  162 (276)
T ss_dssp             EECCCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCC
T ss_pred             EeccCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeecccccccC
Confidence            999999999999974    346899999999999999999999   8899999999999999999999999999998765


Q ss_pred             CC-----CcCCCcccCcccccCCCC-CCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhhc
Q 047245          260 GS-----LIATSAYSAPECFQNRSY-TDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREALD  333 (380)
Q Consensus       260 ~~-----~~~~~~y~aPE~~~~~~~-~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  333 (380)
                      ..     ..+++.|+|||.+.+..+ +.++||||||+++|||++|..||...        ........... +.      
T Consensus       163 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~--------~~~~~~~~~~~-~~------  227 (276)
T 2h6d_A          163 DGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE--------HVPTLFKKIRG-GV------  227 (276)
T ss_dssp             C-------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHH-CC------
T ss_pred             CCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCC--------cHHHHHHHhhc-Cc------
Confidence            32     358899999999988765 68999999999999999999998641        11122221111 10      


Q ss_pred             hhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          334 RSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                           ...+......+.+++.+||+.||++|||++|+++
T Consensus       228 -----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~  261 (276)
T 2h6d_A          228 -----FYIPEYLNRSVATLLMHMLQVDPLKRATIKDIRE  261 (276)
T ss_dssp             -----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -----ccCchhcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence                 0011123345789999999999999999999986


No 184
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00  E-value=6.2e-43  Score=328.01  Aligned_cols=249  Identities=15%  Similarity=0.146  Sum_probs=193.7

Q ss_pred             cccccCccCCeeEEEEEec---------CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcce------
Q 047245          101 ENRLLGSSPDGKYYRTVLD---------NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMS------  165 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~---------~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~------  165 (380)
                      ..+.||+|+||.||++...         +++.||+|.+...             ..+.+|+.++++++||||++      
T Consensus        46 ~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------------~~~~~E~~~l~~l~h~niv~~~~~~~  112 (352)
T 2jii_A           46 LKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------------GRLFNEQNFFQRAAKPLQVNKWKKLY  112 (352)
T ss_dssp             EEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-------------STHHHHHHHHHHHCCHHHHHHHHHHT
T ss_pred             EEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-------------chHHHHHHHHHHhcccchhhhhhhhc
Confidence            4578999999999999975         3889999998641             35778999999999999887      


Q ss_pred             ---------eeEEEec-CCeEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCC
Q 047245          166 ---------LRAYVPE-SSRFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLK  235 (380)
Q Consensus       166 ---------l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk  235 (380)
                               +++++.. ....++||||+ +++|.+++...  ....+++..++.++.|++.||+|||   +.+++|||||
T Consensus       113 ~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dik  186 (352)
T 2jii_A          113 STPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS--PKHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVT  186 (352)
T ss_dssp             TCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS--GGGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCC
T ss_pred             cCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhC--CcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCC
Confidence                     6777765 78899999999 99999999852  2357999999999999999999999   8899999999


Q ss_pred             CCcEEeCCCC--ceEEeccCCcccCCC-------------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCC
Q 047245          236 PTNVMLDAEF--TPRLADFGLAKLMPG-------------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRD  300 (380)
Q Consensus       236 ~~Nill~~~~--~~kl~Dfgl~~~~~~-------------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~  300 (380)
                      |+||+++.++  .+||+|||+++....             ...+|+.|+|||.+.+..++.++||||||+++|||++|+.
T Consensus       187 p~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~  266 (352)
T 2jii_A          187 AENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFL  266 (352)
T ss_dssp             GGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCC
T ss_pred             HHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCC
Confidence            9999999998  999999999975431             2358999999999999999999999999999999999999


Q ss_pred             CCCchhhhccCCCCHHHHHHHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhcc
Q 047245          301 PTAPFFAEAASGGSLGRWLRHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQL  377 (380)
Q Consensus       301 p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l  377 (380)
                      ||.....   ....+...........  ....+..    .........+.+++.+||+.||++|||++++++.|+++
T Consensus       267 pf~~~~~---~~~~~~~~~~~~~~~~--~~~~~~~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~  334 (352)
T 2jii_A          267 PWTNCLP---NTEDIMKQKQKFVDKP--GPFVGPC----GHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEAL  334 (352)
T ss_dssp             TTGGGTT---CHHHHHHHHHHHHHSC--CCEECTT----SCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred             CcccCCc---CHHHHHHHHHhccCCh--hhhhhhc----cccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHH
Confidence            9864210   0001111111111100  0000000    00011245688999999999999999999999999876


No 185
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00  E-value=3.4e-42  Score=328.56  Aligned_cols=245  Identities=20%  Similarity=0.280  Sum_probs=193.0

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++.. .+|+.||+|++.....     ......+.+.+|..++..++||||+++++++.+.+..++|
T Consensus        65 ~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~-----~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV  139 (412)
T 2vd5_A           65 ILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDM-----LKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLV  139 (412)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH-----HHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEE
T ss_pred             EEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHh-----hhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEE
Confidence            457899999999999997 4789999999964110     1111234578899999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||+++|+|.+++...   ...+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||+++...
T Consensus       140 mE~~~gg~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~  213 (412)
T 2vd5_A          140 MEYYVGGDLLTLLSKF---GERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLR  213 (412)
T ss_dssp             ECCCCSCBHHHHHHHH---SSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EcCCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEEeechhheecc
Confidence            9999999999999742   346899999999999999999999   8999999999999999999999999999997654


Q ss_pred             C-------CCcCCCcccCccccc-------CCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhh
Q 047245          260 G-------SLIATSAYSAPECFQ-------NRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHA  325 (380)
Q Consensus       260 ~-------~~~~~~~y~aPE~~~-------~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~  325 (380)
                      .       ...||+.|+|||.+.       ...++.++|||||||++|||++|+.||...        +..+........
T Consensus       214 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~--------~~~~~~~~i~~~  285 (412)
T 2vd5_A          214 ADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYAD--------STAETYGKIVHY  285 (412)
T ss_dssp             TTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCS--------SHHHHHHHHHTH
T ss_pred             CCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCC--------CHHHHHHHHHhc
Confidence            3       236899999999997       457899999999999999999999998641        112222222111


Q ss_pred             cchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCC---CCHHhHHH
Q 047245          326 GEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADR---PSSDELVP  372 (380)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~R---Ps~~evl~  372 (380)
                      .   ..+.    ........+..+.+++.+||+ +|.+|   |+++|+++
T Consensus       286 ~---~~~~----~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~  327 (412)
T 2vd5_A          286 K---EHLS----LPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT  327 (412)
T ss_dssp             H---HHCC----CC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred             c---cCcC----CCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence            0   0000    011112234568899999999 99998   58888763


No 186
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00  E-value=1.7e-41  Score=313.03  Aligned_cols=239  Identities=23%  Similarity=0.367  Sum_probs=191.7

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++... +|+.||+|.+.....          .+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        33 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~----------~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  102 (314)
T 3com_A           33 VLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD----------LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIV  102 (314)
T ss_dssp             EEEECC----CEEEEEEETTTCCEEEEEEEETTSC----------CHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hheeeccCCCeEEEEEEECCCCCEEEEEecCchHH----------HHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEE
Confidence            4568999999999999974 589999999975211          25688999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||+++|+|.+++..   ....+++..+..++.|++.||+|||   +.+++|+||+|+||+++.++.+||+|||++....
T Consensus       103 ~e~~~~~~L~~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~  176 (314)
T 3com_A          103 MEYCGAGSVSDIIRL---RNKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLT  176 (314)
T ss_dssp             EECCTTEEHHHHHHH---HTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECB
T ss_pred             eecCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhh
Confidence            999999999999863   2457899999999999999999999   8999999999999999999999999999997654


Q ss_pred             C------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhhc
Q 047245          260 G------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREALD  333 (380)
Q Consensus       260 ~------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  333 (380)
                      .      ...+++.|+|||.+.+..++.++||||||+++|||++|..||...        .............      .
T Consensus       177 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--------~~~~~~~~~~~~~------~  242 (314)
T 3com_A          177 DTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADI--------HPMRAIFMIPTNP------P  242 (314)
T ss_dssp             TTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTS--------CHHHHHHHHHHSC------C
T ss_pred             hhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCC--------ChHHHHHHHhcCC------C
Confidence            2      235889999999999999999999999999999999999998631        1111111111110      0


Q ss_pred             hhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          334 RSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      +..   ..+......+.+++.+||+.||.+|||+.++++
T Consensus       243 ~~~---~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~  278 (314)
T 3com_A          243 PTF---RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ  278 (314)
T ss_dssp             CCC---SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             ccc---CCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            000   011223456889999999999999999999974


No 187
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00  E-value=1.2e-41  Score=333.36  Aligned_cols=242  Identities=25%  Similarity=0.399  Sum_probs=190.2

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++... ++..+|+|++.......      .....+.+|+.++++++||||+++++++.+....++|
T Consensus        41 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~------~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  114 (494)
T 3lij_A           41 RVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVST------SSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV  114 (494)
T ss_dssp             EEEEEECC---EEEEEEETTTCCEEEEEEEEC-----------CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             EeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCc------hHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            4578999999999999974 68899999997632211      1136788999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCC---CceEEeccCCcc
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAE---FTPRLADFGLAK  256 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~---~~~kl~Dfgl~~  256 (380)
                      |||+++|+|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+|||++.+   +.+||+|||+++
T Consensus       115 ~e~~~~g~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~  187 (494)
T 3lij_A          115 MECYKGGELFDEIIH----RMKFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSA  187 (494)
T ss_dssp             EECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred             EecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCCe
Confidence            999999999998874    346899999999999999999999   8999999999999999764   559999999997


Q ss_pred             cCCC-----CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHh
Q 047245          257 LMPG-----SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREA  331 (380)
Q Consensus       257 ~~~~-----~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  331 (380)
                      ....     ...||+.|+|||.+. ..++.++||||+|+++|+|++|..||...        ...+...........   
T Consensus       188 ~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~--------~~~~~~~~i~~~~~~---  255 (494)
T 3lij_A          188 VFENQKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQ--------TDQEILRKVEKGKYT---  255 (494)
T ss_dssp             ECBTTBCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHTCCC---
T ss_pred             ECCCCccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCC--------CHHHHHHHHHhCCCC---
Confidence            6543     345899999999886 56899999999999999999999998641        112222222211100   


Q ss_pred             hchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          332 LDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      ++     .......+..+.+++.+||+.||.+|||+.|+++
T Consensus       256 ~~-----~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~  291 (494)
T 3lij_A          256 FD-----SPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE  291 (494)
T ss_dssp             CC-----SGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CC-----chhcccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence            00     0111223456889999999999999999999874


No 188
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.7e-42  Score=325.45  Aligned_cols=245  Identities=21%  Similarity=0.291  Sum_probs=193.6

Q ss_pred             cccccCccCCeeEEEEEe----cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcC-CCCCcceeeEEEecCCe
Q 047245          101 ENRLLGSSPDGKYYRTVL----DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASL-RHRNLMSLRAYVPESSR  175 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~----~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~  175 (380)
                      ..+.||+|+||.||++..    .+|+.||||++.......    .....+.+.+|+++++++ +||||+++++++...+.
T Consensus        58 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  133 (355)
T 1vzo_A           58 LLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQ----KAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  133 (355)
T ss_dssp             EEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEE----EESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             EEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhh----hhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence            457899999999999997    478999999986522100    011124566799999999 79999999999999999


Q ss_pred             EEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCc
Q 047245          176 FYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLA  255 (380)
Q Consensus       176 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~  255 (380)
                      .++||||+++|+|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+|||++.++.+||+|||++
T Consensus       134 ~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a  206 (355)
T 1vzo_A          134 LHLILDYINGGELFTHLSQ----RERFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLS  206 (355)
T ss_dssp             EEEEECCCCSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred             EEEEeecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeCCCC
Confidence            9999999999999999974    346899999999999999999999   889999999999999999999999999999


Q ss_pred             ccCCC-------CCcCCCcccCcccccC--CCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhc
Q 047245          256 KLMPG-------SLIATSAYSAPECFQN--RSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAG  326 (380)
Q Consensus       256 ~~~~~-------~~~~~~~y~aPE~~~~--~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~  326 (380)
                      +....       ...||+.|+|||.+.+  ..++.++||||||+++|||++|+.||...    .................
T Consensus       207 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~----~~~~~~~~~~~~~~~~~  282 (355)
T 1vzo_A          207 KEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVD----GEKNSQAEISRRILKSE  282 (355)
T ss_dssp             EECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCT----TSCCCHHHHHHHHHHCC
T ss_pred             eecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccC----CccchHHHHHHHHhccC
Confidence            76532       2358999999999985  34789999999999999999999998631    11222233322222110


Q ss_pred             chhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCC-----CHHhHHH
Q 047245          327 EAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRP-----SSDELVP  372 (380)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RP-----s~~evl~  372 (380)
                                  ...+......+.+++.+||+.||.+||     |++|+++
T Consensus       283 ------------~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~  321 (355)
T 1vzo_A          283 ------------PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE  321 (355)
T ss_dssp             ------------CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             ------------CCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHc
Confidence                        112223445678999999999999999     8888875


No 189
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00  E-value=1.2e-41  Score=332.70  Aligned_cols=243  Identities=26%  Similarity=0.362  Sum_probs=195.4

Q ss_pred             ccccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEE
Q 047245          100 NENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYL  178 (380)
Q Consensus       100 ~~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  178 (380)
                      ...+.||+|+||.||++... +|+.||+|++......      ......+.+|+.++++++||||+++++++.+....++
T Consensus        25 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l   98 (486)
T 3mwu_A           25 NIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK------NKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI   98 (486)
T ss_dssp             EEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHB------CSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             EEeEEEeecCCEEEEEEEECCCCCEEEEEEEeccccc------chHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEE
Confidence            35678999999999999974 7899999999652211      1123678899999999999999999999999999999


Q ss_pred             EEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeC---CCCceEEeccCCc
Q 047245          179 VYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLD---AEFTPRLADFGLA  255 (380)
Q Consensus       179 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~---~~~~~kl~Dfgl~  255 (380)
                      |+||+++|+|.+++..    ...+++..+..++.|++.||+|||   +.+|+||||||+|||++   .++.+||+|||++
T Consensus        99 v~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a  171 (486)
T 3mwu_A           99 VGELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS  171 (486)
T ss_dssp             EECCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCT
T ss_pred             EEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcC
Confidence            9999999999998874    346899999999999999999999   89999999999999995   4568999999999


Q ss_pred             ccCCC-----CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhH
Q 047245          256 KLMPG-----SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEARE  330 (380)
Q Consensus       256 ~~~~~-----~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  330 (380)
                      +....     ...||+.|+|||.+.+ .++.++||||+|+++|+|++|..||...        ...+...........  
T Consensus       172 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~--------~~~~~~~~i~~~~~~--  240 (486)
T 3mwu_A          172 TCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGK--------NEYDILKRVETGKYA--  240 (486)
T ss_dssp             TTBCCC----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHTCCC--
T ss_pred             eECCCCCccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCC--------CHHHHHHHHHhCCCC--
Confidence            76543     3458999999999875 5899999999999999999999998631        112222222111100  


Q ss_pred             hhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          331 ALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                         .   ..+.....+..+.+++.+||+.||.+|||+.|+++
T Consensus       241 ---~---~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~  276 (486)
T 3mwu_A          241 ---F---DLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE  276 (486)
T ss_dssp             ---S---CSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             ---C---CCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence               0   00111223456889999999999999999999986


No 190
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00  E-value=3.3e-42  Score=319.82  Aligned_cols=245  Identities=20%  Similarity=0.325  Sum_probs=195.0

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcC-CCCCcceeeEEEecCCeEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASL-RHRNLMSLRAYVPESSRFYL  178 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l  178 (380)
                      ..+.||+|+||.||++... +|+.||+|++......      ......+.+|+.++.++ +||||+++++++.+.+..++
T Consensus        33 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~l  106 (327)
T 3lm5_A           33 TSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRG------QDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIIL  106 (327)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETT------EECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             ccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcc------hHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEE
Confidence            3478999999999999874 6899999999763322      11236788999999999 57999999999999999999


Q ss_pred             EEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCC---CCceEEeccCCc
Q 047245          179 VYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDA---EFTPRLADFGLA  255 (380)
Q Consensus       179 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~---~~~~kl~Dfgl~  255 (380)
                      ||||+++|+|.+++..  .....+++..++.++.|++.||+|||   +.+++||||||+||+++.   ++.+||+|||++
T Consensus       107 v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a  181 (327)
T 3lm5_A          107 ILEYAAGGEIFSLCLP--ELAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMS  181 (327)
T ss_dssp             EEECCTTEEGGGGGSS--CC-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBCCEEECCGGGC
T ss_pred             EEEecCCCcHHHHHHH--hcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCCCcEEEeeCccc
Confidence            9999999999998853  22457999999999999999999999   889999999999999988   789999999999


Q ss_pred             ccCCCC-----CcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhH
Q 047245          256 KLMPGS-----LIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEARE  330 (380)
Q Consensus       256 ~~~~~~-----~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  330 (380)
                      +.....     ..+++.|+|||.+.+..++.++||||||+++|||++|..||...        .............    
T Consensus       182 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~--------~~~~~~~~i~~~~----  249 (327)
T 3lm5_A          182 RKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGE--------DNQETYLNISQVN----  249 (327)
T ss_dssp             EEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHTC----
T ss_pred             cccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--------CchHHHHHHHhcc----
Confidence            865432     35899999999999999999999999999999999999998641        1111111111100    


Q ss_pred             hhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          331 ALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                         .... ..........+.+++.+||+.||++|||++|+++
T Consensus       250 ---~~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~  287 (327)
T 3lm5_A          250 ---VDYS-EETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS  287 (327)
T ss_dssp             ---CCCC-TTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             ---cccC-chhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence               0000 1111224456889999999999999999999874


No 191
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00  E-value=4.7e-42  Score=320.41  Aligned_cols=243  Identities=22%  Similarity=0.364  Sum_probs=192.0

Q ss_pred             ccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHH-HHcCCCCCcceeeEEEecCCeEEEE
Q 047245          102 NRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEV-LASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       102 ~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      .+.||+|+||.||++.. .+|+.||||++.....       .....++..|... ++.++||||+++++++.+.+..++|
T Consensus        56 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv  128 (340)
T 3an0_A           56 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN-------SQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC  128 (340)
T ss_dssp             EEEEEECSSEEEEEEEETTTTEEEEEEEECSCCC-------CHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEE
T ss_pred             eeEecccCCEEEEEEEEcCCCCEEEEEEeccccC-------cHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEE
Confidence            46799999999999996 5789999999975221       1223445555555 7788999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCC-CeEecCCCCCcEEeCCCCceEEeccCCcccC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNP-QILHYNLKPTNVMLDAEFTPRLADFGLAKLM  258 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~-~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~  258 (380)
                      |||+++ +|.+++.........+++..++.++.|++.||+|||   +. +++||||||+|||++.++.+||+|||+++..
T Consensus       129 ~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~  204 (340)
T 3an0_A          129 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL  204 (340)
T ss_dssp             ECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred             HHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence            999975 999999865555678999999999999999999999   75 9999999999999999999999999998765


Q ss_pred             CCC-----CcCCCcccCccccc----CCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchh
Q 047245          259 PGS-----LIATSAYSAPECFQ----NRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAR  329 (380)
Q Consensus       259 ~~~-----~~~~~~y~aPE~~~----~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~  329 (380)
                      ...     ..||+.|+|||.+.    ...++.++||||||+++|||++|+.||...       ..............   
T Consensus       205 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~-------~~~~~~~~~~~~~~---  274 (340)
T 3an0_A          205 VDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSW-------GTPFQQLKQVVEEP---  274 (340)
T ss_dssp             SCHHHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCC-------SCHHHHHHHHHHSC---
T ss_pred             ccccccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccc-------cchHHHHHHHhcCC---
Confidence            432     35899999999964    347899999999999999999999998631       01111111111111   


Q ss_pred             HhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          330 EALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                         .+.    .........+.+++.+||+.||++|||+.|+++
T Consensus       275 ---~~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  310 (340)
T 3an0_A          275 ---SPQ----LPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ  310 (340)
T ss_dssp             ---CCC----CCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             ---CCC----CCcccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence               011    111223456889999999999999999999975


No 192
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00  E-value=5.5e-42  Score=335.04  Aligned_cols=244  Identities=27%  Similarity=0.386  Sum_probs=196.6

Q ss_pred             ccccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEE
Q 047245          100 NENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYL  178 (380)
Q Consensus       100 ~~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  178 (380)
                      ...+.||+|+||.||++... +|+.||||++.......     ......+.+|+.++++++||||+++++++.+.+..++
T Consensus        29 ~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-----~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  103 (484)
T 3nyv_A           29 KGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ-----KTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL  103 (484)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCB-----SSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             EEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhccc-----chHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            35678999999999999974 78999999996532211     1224678899999999999999999999999999999


Q ss_pred             EEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEe---CCCCceEEeccCCc
Q 047245          179 VYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVML---DAEFTPRLADFGLA  255 (380)
Q Consensus       179 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill---~~~~~~kl~Dfgl~  255 (380)
                      |+||+++|+|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+|||+   +.++.+||+|||++
T Consensus       104 v~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a  176 (484)
T 3nyv_A          104 VGEVYTGGELFDEIIS----RKRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS  176 (484)
T ss_dssp             EECCCCSCBHHHHHHT----CSCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHH
T ss_pred             EEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeee
Confidence            9999999999999864    456899999999999999999999   8899999999999999   56789999999999


Q ss_pred             ccCCCC-----CcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhH
Q 047245          256 KLMPGS-----LIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEARE  330 (380)
Q Consensus       256 ~~~~~~-----~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  330 (380)
                      +.....     ..||+.|+|||.+.+ .++.++||||+|+++|+|++|..||...        ...+...........  
T Consensus       177 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~--------~~~~~~~~i~~~~~~--  245 (484)
T 3nyv_A          177 THFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGA--------NEYDILKKVEKGKYT--  245 (484)
T ss_dssp             HHBCCCCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHCCCC--
T ss_pred             EEcccccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCC--------CHHHHHHHHHcCCCC--
Confidence            765433     248999999999876 6899999999999999999999998641        111222222111100  


Q ss_pred             hhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          331 ALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                         .   ..+.....+..+.+++.+||+.||.+|||+.|+++
T Consensus       246 ---~---~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~  281 (484)
T 3nyv_A          246 ---F---ELPQWKKVSESAKDLIRKMLTYVPSMRISARDALD  281 (484)
T ss_dssp             ---C---CSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ---C---CCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence               0   00111234456889999999999999999999974


No 193
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00  E-value=1.5e-41  Score=314.65  Aligned_cols=250  Identities=22%  Similarity=0.351  Sum_probs=189.6

Q ss_pred             ccccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEE
Q 047245          100 NENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYL  178 (380)
Q Consensus       100 ~~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  178 (380)
                      ...+.||+|+||.||++.. .+|+.||||.+..................+.+|+.++++++||||+++++++.... .++
T Consensus        13 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~l   91 (322)
T 2ycf_A           13 IMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-YYI   91 (322)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-EEE
T ss_pred             eEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-eEE
Confidence            3567899999999999987 46889999998653211111112233456889999999999999999999997765 899


Q ss_pred             EEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCc---eEEeccCCc
Q 047245          179 VYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFT---PRLADFGLA  255 (380)
Q Consensus       179 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~---~kl~Dfgl~  255 (380)
                      ||||+++|+|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+||+++.++.   +||+|||++
T Consensus        92 v~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~  164 (322)
T 2ycf_A           92 VLELMEGGELFDKVVG----NKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS  164 (322)
T ss_dssp             EEECCTTEETHHHHST----TCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEEECCCTTC
T ss_pred             EEecCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEEEccCccc
Confidence            9999999999998863    457899999999999999999999   899999999999999987654   999999999


Q ss_pred             ccCCCC-----CcCCCcccCccccc---CCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcc
Q 047245          256 KLMPGS-----LIATSAYSAPECFQ---NRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGE  327 (380)
Q Consensus       256 ~~~~~~-----~~~~~~y~aPE~~~---~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~  327 (380)
                      +.....     ..+++.|+|||.+.   ...++.++||||||+++|||++|..||...    .....+...+..    +.
T Consensus       165 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~----~~~~~~~~~~~~----~~  236 (322)
T 2ycf_A          165 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH----RTQVSLKDQITS----GK  236 (322)
T ss_dssp             EECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCST----TCSSCHHHHHHH----TC
T ss_pred             eecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCccc----chHHHHHHHHHh----Cc
Confidence            876643     24899999999974   567899999999999999999999998631    111122221111    10


Q ss_pred             hhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          328 AREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      ..  ..+..     .......+.+++.+||+.||++|||+.|+++
T Consensus       237 ~~--~~~~~-----~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          237 YN--FIPEV-----WAEVSEKALDLVKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             CC--CCHHH-----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             cc--cCchh-----hhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence            00  00000     0123456889999999999999999999874


No 194
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00  E-value=1.8e-41  Score=329.11  Aligned_cols=185  Identities=24%  Similarity=0.392  Sum_probs=149.2

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEec-----CC
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPE-----SS  174 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----~~  174 (380)
                      ..+.||+|+||.||++.. .+|+.||||++....      ......+.+.+|+.++++++||||+++++++..     ..
T Consensus        57 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~------~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  130 (458)
T 3rp9_A           57 IRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVF------EDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD  130 (458)
T ss_dssp             ECCC-------CEEEEEECC--CEEEEEEECSTT------SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred             EeeEeeecCCeEEEEEEECCCCcEEEEEEechhh------cCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCc
Confidence            457899999999999986 478999999986421      233445788999999999999999999999843     35


Q ss_pred             eEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCC
Q 047245          175 RFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGL  254 (380)
Q Consensus       175 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl  254 (380)
                      ..++||||+ +|+|.+++..    ...+++..+..++.||+.||+|||   +.+|+||||||+|||++.++.+||+|||+
T Consensus       131 ~~~lv~e~~-~~~L~~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGl  202 (458)
T 3rp9_A          131 ELYVVLEIA-DSDFKKLFRT----PVYLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGL  202 (458)
T ss_dssp             CEEEEECCC-SEEHHHHHHS----SCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred             eEEEEEecc-ccchhhhccc----CCCCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeeccccc
Confidence            789999998 5699998863    456999999999999999999999   88999999999999999999999999999


Q ss_pred             cccCCC---------------------------------CCcCCCcccCcccc-cCCCCCCcchhhHHHHHHHHHHhCC
Q 047245          255 AKLMPG---------------------------------SLIATSAYSAPECF-QNRSYTDKSDIFSFGMILAVLLTGR  299 (380)
Q Consensus       255 ~~~~~~---------------------------------~~~~~~~y~aPE~~-~~~~~~~~sDv~s~Gvil~el~tg~  299 (380)
                      ++....                                 ...||+.|+|||.+ ....++.++|||||||++|||++|.
T Consensus       203 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~  281 (458)
T 3rp9_A          203 ARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMI  281 (458)
T ss_dssp             CBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTS
T ss_pred             chhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhc
Confidence            986531                                 12479999999986 4667999999999999999999943


No 195
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00  E-value=2.8e-42  Score=320.64  Aligned_cols=250  Identities=23%  Similarity=0.343  Sum_probs=185.0

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++.. .+|+.||+|++....      ......+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        38 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  111 (329)
T 3gbz_A           38 RITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEH------EEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI  111 (329)
T ss_dssp             EEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred             EEEEEEecCCeEEEEEEECCCCceEEEEEEcccc------cccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence            457899999999999985 578999999996522      1223346778999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEe-----CCCCceEEeccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVML-----DAEFTPRLADFGL  254 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill-----~~~~~~kl~Dfgl  254 (380)
                      |||++ |+|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+|||+     +.++.+||+|||+
T Consensus       112 ~e~~~-~~L~~~~~~----~~~~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~  183 (329)
T 3gbz_A          112 FEYAE-NDLKKYMDK----NPDVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGL  183 (329)
T ss_dssp             EECCS-EEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECCTTH
T ss_pred             EecCC-CCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECcCCC
Confidence            99997 499999874    346899999999999999999999   8899999999999999     4555699999999


Q ss_pred             cccCCC------CCcCCCcccCcccccCC-CCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhh-c
Q 047245          255 AKLMPG------SLIATSAYSAPECFQNR-SYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHA-G  326 (380)
Q Consensus       255 ~~~~~~------~~~~~~~y~aPE~~~~~-~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~-~  326 (380)
                      ++....      ...+|+.|+|||.+.+. .++.++||||||+++|||++|..||....        ..+........ +
T Consensus       184 a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--------~~~~~~~~~~~~~  255 (329)
T 3gbz_A          184 ARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDS--------EIDQLFKIFEVLG  255 (329)
T ss_dssp             HHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHHHC
T ss_pred             ccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCC--------HHHHHHHHHHHhC
Confidence            875432      23579999999999874 48999999999999999999999986421        11111111100 0


Q ss_pred             chhHh----h------c---hhccCCc----ccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          327 EAREA----L------D---RSILGEE----VEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       327 ~~~~~----~------~---~~~~~~~----~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      .....    .      .   +......    ........+.+++.+||+.||++|||++|+++
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  318 (329)
T 3gbz_A          256 LPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE  318 (329)
T ss_dssp             CCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence            00000    0      0   0000000    00112356789999999999999999999985


No 196
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00  E-value=2.9e-42  Score=321.93  Aligned_cols=240  Identities=23%  Similarity=0.353  Sum_probs=190.5

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcC-CCCCcceeeEEEecCCeEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASL-RHRNLMSLRAYVPESSRFYL  178 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l  178 (380)
                      ..+.||+|+||.||++... +|+.||+|++....            ....+|++++.++ +||||+++++++.+.+..++
T Consensus        26 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~------------~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~l   93 (342)
T 2qr7_A           26 VKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK------------RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYV   93 (342)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEEETTT------------CCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEE
T ss_pred             EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEccc------------CChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEE
Confidence            4578999999999999974 68899999997522            1234688888888 79999999999999999999


Q ss_pred             EEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCC----CceEEeccCC
Q 047245          179 VYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAE----FTPRLADFGL  254 (380)
Q Consensus       179 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~----~~~kl~Dfgl  254 (380)
                      ||||+++|+|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+|||+.++    +.+||+|||+
T Consensus        94 v~E~~~gg~L~~~i~~----~~~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~  166 (342)
T 2qr7_A           94 VTELMKGGELLDKILR----QKFFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGF  166 (342)
T ss_dssp             EECCCCSCBHHHHHHT----CTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTT
T ss_pred             EEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCC
Confidence            9999999999999874    346899999999999999999999   8999999999999998543    3599999999


Q ss_pred             cccCCC------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcch
Q 047245          255 AKLMPG------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEA  328 (380)
Q Consensus       255 ~~~~~~------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~  328 (380)
                      ++....      ...+|+.|+|||.+.+..++.++||||||+++|||++|..||...     ................ .
T Consensus       167 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~-----~~~~~~~~~~~i~~~~-~  240 (342)
T 2qr7_A          167 AKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANG-----PDDTPEEILARIGSGK-F  240 (342)
T ss_dssp             CEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSS-----TTSCHHHHHHHHHHCC-C
T ss_pred             cccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCC-----CcCCHHHHHHHHccCC-c
Confidence            976532      235899999999998888999999999999999999999998631     1112222222222111 0


Q ss_pred             hHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          329 REALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                            ... ..........+.+++.+||+.||++|||+.|+++
T Consensus       241 ------~~~-~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~  277 (342)
T 2qr7_A          241 ------SLS-GGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR  277 (342)
T ss_dssp             ------CCC-STTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             ------ccC-ccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence                  000 0111224456889999999999999999999874


No 197
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00  E-value=9.4e-43  Score=322.02  Aligned_cols=245  Identities=20%  Similarity=0.286  Sum_probs=191.5

Q ss_pred             cccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLVY  180 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  180 (380)
                      ..+.||+|+||.||+|...+  .+|+|++........      ..+.+.+|+.++++++||||+++++++.+.+..++|+
T Consensus        37 ~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~------~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~  108 (319)
T 2y4i_B           37 IGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNED------QLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT  108 (319)
T ss_dssp             CCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCC------CCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEEC
T ss_pred             EeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHH------HHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEe
Confidence            45789999999999998753  599999875332211      1245678999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCCC
Q 047245          181 DYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMPG  260 (380)
Q Consensus       181 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~  260 (380)
                      ||+++++|.+++..   ....+++..++.++.|++.||+|||   +.+++||||||+||+++ ++.+||+|||+++....
T Consensus       109 e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~  181 (319)
T 2y4i_B          109 SLCKGRTLYSVVRD---AKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGV  181 (319)
T ss_dssp             BCCCSEEHHHHTTS---SCCCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEECCCSCCC----
T ss_pred             ecccCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEeecCCcccccc
Confidence            99999999999863   2346899999999999999999999   88999999999999998 67999999999765421


Q ss_pred             -----------CCcCCCcccCcccccC---------CCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHH
Q 047245          261 -----------SLIATSAYSAPECFQN---------RSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLR  320 (380)
Q Consensus       261 -----------~~~~~~~y~aPE~~~~---------~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~  320 (380)
                                 ...|++.|+|||.+.+         ..++.++||||||+++|||++|..||...        .......
T Consensus       182 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~--------~~~~~~~  253 (319)
T 2y4i_B          182 LQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ--------PAEAIIW  253 (319)
T ss_dssp             ------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSC--------CHHHHHH
T ss_pred             ccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCC--------CHHHHHH
Confidence                       1247889999999874         45788999999999999999999998641        1112222


Q ss_pred             HHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          321 HLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                      .....      ..+....    ......+.+++.+||+.||++|||+.++++.|++++
T Consensus       254 ~~~~~------~~~~~~~----~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~  301 (319)
T 2y4i_B          254 QMGTG------MKPNLSQ----IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLP  301 (319)
T ss_dssp             HHHTT------CCCCCCC----SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-
T ss_pred             HhccC------CCCCCCc----CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence            21111      1111111    112344789999999999999999999999999885


No 198
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00  E-value=4.3e-41  Score=317.73  Aligned_cols=249  Identities=21%  Similarity=0.348  Sum_probs=186.9

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCC-----
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESS-----  174 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----  174 (380)
                      ..+.||+|+||.||++.. .+|+.||||++....      ......+.+.+|+.+++.++||||+++++++...+     
T Consensus        29 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~  102 (371)
T 2xrw_A           29 NLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF------QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF  102 (371)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEEECTT------SSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred             EeeeeEecCCEEEEEEEECCCCceEEEEEecccc------CChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence            346799999999999986 468899999997521      12344577889999999999999999999997654     


Q ss_pred             -eEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccC
Q 047245          175 -RFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFG  253 (380)
Q Consensus       175 -~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfg  253 (380)
                       ..++||||+++ +|.+++.      ..+++..+..++.|++.||+|||   +.+++||||||+|||++.++.+||+|||
T Consensus       103 ~~~~lv~e~~~~-~l~~~~~------~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg  172 (371)
T 2xrw_A          103 QDVYIVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFG  172 (371)
T ss_dssp             CEEEEEEECCSE-EHHHHHH------SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred             cceEEEEEcCCC-CHHHHHh------hccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEee
Confidence             78999999975 8888775      25889999999999999999999   8899999999999999999999999999


Q ss_pred             CcccCCC-----CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHh----
Q 047245          254 LAKLMPG-----SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQH----  324 (380)
Q Consensus       254 l~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~----  324 (380)
                      +++....     ...+|+.|+|||.+.+..++.++||||||+++|||++|+.||.....       ...+......    
T Consensus       173 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-------~~~~~~i~~~~~~~  245 (371)
T 2xrw_A          173 LARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH-------IDQWNKVIEQLGTP  245 (371)
T ss_dssp             C----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHC-CCCC
T ss_pred             cccccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHHHhCCC
Confidence            9986543     24589999999999999999999999999999999999999864211       1111110000    


Q ss_pred             -----------------hc------chhHhhchhccCC--cccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          325 -----------------AG------EAREALDRSILGE--EVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       325 -----------------~~------~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                                       ..      .....+.......  .........+.+++.+||+.||++|||++|+++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  318 (371)
T 2xrw_A          246 CPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ  318 (371)
T ss_dssp             CHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence                             00      0000000000000  111234667899999999999999999999985


No 199
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00  E-value=3.5e-41  Score=315.86  Aligned_cols=254  Identities=22%  Similarity=0.313  Sum_probs=189.2

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEec-------
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPE-------  172 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-------  172 (380)
                      ..+.||+|+||.||++.. .+|+.||+|++.......      .....+.+|+.++++++||||+++++++..       
T Consensus        21 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   94 (351)
T 3mi9_A           21 KLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE------GFPITALREIKILQLLKHENVVNLIEICRTKASPYNR   94 (351)
T ss_dssp             EEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSS------SSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred             EEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccc------cchHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence            457899999999999997 578999999986533221      112567789999999999999999999876       


Q ss_pred             -CCeEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEec
Q 047245          173 -SSRFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLAD  251 (380)
Q Consensus       173 -~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~D  251 (380)
                       .+..++||||+++ +|.+.+..   ....+++..+..++.|++.||+|||   +.+++||||||+|||++.++.+||+|
T Consensus        95 ~~~~~~lv~e~~~~-~l~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~D  167 (351)
T 3mi9_A           95 CKGSIYLVFDFCEH-DLAGLLSN---VLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLAD  167 (351)
T ss_dssp             --CEEEEEEECCSE-EHHHHHHC---TTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECC
T ss_pred             CCceEEEEEeccCC-CHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEcc
Confidence             4568999999975 88887763   2356999999999999999999999   89999999999999999999999999


Q ss_pred             cCCcccCC----------CCCcCCCcccCcccccC-CCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHH
Q 047245          252 FGLAKLMP----------GSLIATSAYSAPECFQN-RSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLR  320 (380)
Q Consensus       252 fgl~~~~~----------~~~~~~~~y~aPE~~~~-~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~  320 (380)
                      ||+++...          ....+|+.|+|||.+.+ ..++.++||||||+++|||++|..||......     .....+.
T Consensus       168 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-----~~~~~i~  242 (351)
T 3mi9_A          168 FGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ-----HQLALIS  242 (351)
T ss_dssp             CTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-----HHHHHHH
T ss_pred             chhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHH
Confidence            99997543          12347899999999876 55899999999999999999999998642111     0001111


Q ss_pred             HHHhhcc--hhHhhc---------hhccCCcccHH------HHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          321 HLQHAGE--AREALD---------RSILGEEVEED------EMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       321 ~~~~~~~--~~~~~~---------~~~~~~~~~~~------~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      .......  .....+         ..........+      ....+.+++.+||+.||++|||++|+++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  311 (351)
T 3mi9_A          243 QLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN  311 (351)
T ss_dssp             HHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence            1100000  000000         00000000001      1344789999999999999999999985


No 200
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00  E-value=3.4e-41  Score=322.10  Aligned_cols=190  Identities=27%  Similarity=0.450  Sum_probs=152.9

Q ss_pred             cccccCccCCeeEEEEEec---CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEe--cCCe
Q 047245          101 ENRLLGSSPDGKYYRTVLD---NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVP--ESSR  175 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~  175 (380)
                      .+++||+|+||.||++...   ++..||+|++.....          ...+.+|+.++++++||||+++++++.  ....
T Consensus        25 ~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~----------~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~   94 (405)
T 3rgf_A           25 EGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI----------SMSACREIALLRELKHPNVISLQKVFLSHADRK   94 (405)
T ss_dssp             SSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC----------CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTE
T ss_pred             cCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC----------CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCe
Confidence            4668999999999999964   578999999864211          146778999999999999999999994  4678


Q ss_pred             EEEEEeecCCCCHHHHHHHhhhc-----ccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEe----CCCCc
Q 047245          176 FYLVYDYLQTGSLEDAMDRIREN-----QLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVML----DAEFT  246 (380)
Q Consensus       176 ~~lv~e~~~~gsL~~~l~~~~~~-----~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill----~~~~~  246 (380)
                      .++||||++ |+|.+++......     ...+++..+..++.|++.||+|||   +.+|+||||||+|||+    +.++.
T Consensus        95 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~  170 (405)
T 3rgf_A           95 VWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGR  170 (405)
T ss_dssp             EEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTC
T ss_pred             EEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCc
Confidence            999999996 5898888643321     224899999999999999999999   8999999999999999    67789


Q ss_pred             eEEeccCCcccCCC---------CCcCCCcccCcccccC-CCCCCcchhhHHHHHHHHHHhCCCCCCc
Q 047245          247 PRLADFGLAKLMPG---------SLIATSAYSAPECFQN-RSYTDKSDIFSFGMILAVLLTGRDPTAP  304 (380)
Q Consensus       247 ~kl~Dfgl~~~~~~---------~~~~~~~y~aPE~~~~-~~~~~~sDv~s~Gvil~el~tg~~p~~~  304 (380)
                      +||+|||+++....         ...||+.|+|||.+.+ ..++.++|||||||++|||++|..||..
T Consensus       171 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~  238 (405)
T 3rgf_A          171 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC  238 (405)
T ss_dssp             EEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             EEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCC
Confidence            99999999986542         2358999999999987 4589999999999999999999999964


No 201
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00  E-value=1.7e-41  Score=341.95  Aligned_cols=244  Identities=20%  Similarity=0.347  Sum_probs=197.8

Q ss_pred             cccccCccCCeeEEEEEec----CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeE
Q 047245          101 ENRLLGSSPDGKYYRTVLD----NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRF  176 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  176 (380)
                      ..+.||+|+||.||+|...    .+..||+|++...       ......+.+.+|+.++++++||||+++++++.+ +..
T Consensus       394 i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~-------~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~  465 (656)
T 2j0j_A          394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC-------TSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPV  465 (656)
T ss_dssp             EEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST-------TCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred             EeeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc-------CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-Cce
Confidence            4567999999999999873    2457999988641       123455789999999999999999999999854 568


Q ss_pred             EEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcc
Q 047245          177 YLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAK  256 (380)
Q Consensus       177 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~  256 (380)
                      ++||||+++|+|.+++..   ....+++..++.++.|++.||+|||   +.+++||||||+|||++.++.+||+|||+++
T Consensus       466 ~lv~E~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG~a~  539 (656)
T 2j0j_A          466 WIIMELCTLGELRSFLQV---RKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSR  539 (656)
T ss_dssp             EEEEECCTTCBHHHHHHH---TTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCCCC
T ss_pred             EEEEEcCCCCcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecCCCe
Confidence            999999999999999974   2446899999999999999999999   8899999999999999999999999999998


Q ss_pred             cCCCC-------CcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhccCCCCHHHHHHHHHhhcch
Q 047245          257 LMPGS-------LIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEAASGGSLGRWLRHLQHAGEA  328 (380)
Q Consensus       257 ~~~~~-------~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~  328 (380)
                      .....       ..+++.|+|||.+.+..++.++||||||+++|||++ |..||...        ...+.......... 
T Consensus       540 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~--------~~~~~~~~i~~~~~-  610 (656)
T 2j0j_A          540 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV--------KNNDVIGRIENGER-  610 (656)
T ss_dssp             SCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--------CHHHHHHHHHHTCC-
T ss_pred             ecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCC--------CHHHHHHHHHcCCC-
Confidence            76432       236678999999998999999999999999999997 99998631        11222222211110 


Q ss_pred             hHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhcc
Q 047245          329 REALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQL  377 (380)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l  377 (380)
                                ...+...+..+.+++.+||+.||++|||+.|+++.|+++
T Consensus       611 ----------~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~i  649 (656)
T 2j0j_A          611 ----------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI  649 (656)
T ss_dssp             ----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ----------CCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence                      111223445688999999999999999999999999876


No 202
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00  E-value=2.4e-41  Score=325.21  Aligned_cols=189  Identities=23%  Similarity=0.363  Sum_probs=164.1

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcC------CCCCcceeeEEEecC
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASL------RHRNLMSLRAYVPES  173 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~~~~  173 (380)
                      ..+.||+|+||.||++... +++.||||++..         .....+.+.+|+.+++.+      +|+||+++++++...
T Consensus       101 ~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~---------~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~  171 (429)
T 3kvw_A          101 VLKVIGKGSFGQVVKAYDHKVHQHVALKMVRN---------EKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFR  171 (429)
T ss_dssp             EEEEEEESSSEEEEEEEETTTTEEEEEEEECS---------CHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEET
T ss_pred             EEEEcccCccEEEEEEEECCCCcEEEEEEECC---------ccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccC
Confidence            4578999999999999864 588999999964         223345677788877776      577999999999999


Q ss_pred             CeEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCc--eEEec
Q 047245          174 SRFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFT--PRLAD  251 (380)
Q Consensus       174 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~--~kl~D  251 (380)
                      +..++||||+. ++|.+++..  .....+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.  +||+|
T Consensus       172 ~~~~lv~e~~~-~~L~~~l~~--~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~D  245 (429)
T 3kvw_A          172 NHICMTFELLS-MNLYELIKK--NKFQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVID  245 (429)
T ss_dssp             TEEEEEECCCC-CBHHHHHHH--TTTCCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECC
T ss_pred             CeEEEEEeccC-CCHHHHHHh--ccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEee
Confidence            99999999996 699999875  22345899999999999999999999   889999999999999999887  99999


Q ss_pred             cCCcccCCC---CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCc
Q 047245          252 FGLAKLMPG---SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAP  304 (380)
Q Consensus       252 fgl~~~~~~---~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~  304 (380)
                      ||+++....   ...+|+.|+|||.+.+..++.++|||||||++|||++|..||..
T Consensus       246 FG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~  301 (429)
T 3kvw_A          246 FGSSCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPG  301 (429)
T ss_dssp             CTTCEETTCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cccceecCCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCC
Confidence            999976543   34689999999999999999999999999999999999999864


No 203
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00  E-value=5.1e-42  Score=318.17  Aligned_cols=252  Identities=20%  Similarity=0.288  Sum_probs=187.4

Q ss_pred             ccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEEE
Q 047245          102 NRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLVY  180 (380)
Q Consensus       102 ~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  180 (380)
                      .+.||+|+||.||++... +|+.||+|++......       .....+.+|+.++++++||||+++++++.+.+..++||
T Consensus         7 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   79 (324)
T 3mtl_A            7 LDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEE-------GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF   79 (324)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEECC-------------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEE
T ss_pred             EEEEcCCCCEEEEEEEECCCCcEEEEEEEeccccc-------ccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEe
Confidence            467999999999999974 7899999999652211       11123457999999999999999999999999999999


Q ss_pred             eecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCCC
Q 047245          181 DYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMPG  260 (380)
Q Consensus       181 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~  260 (380)
                      ||++ |+|.+++..   ....+++..+..++.|++.||+|||   +.+++||||||+||+++.++.+||+|||+++....
T Consensus        80 e~~~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~  152 (324)
T 3mtl_A           80 EYLD-KDLKQYLDD---CGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSI  152 (324)
T ss_dssp             ECCS-EEHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC--
T ss_pred             cccc-cCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccC
Confidence            9997 599998874   2446899999999999999999999   89999999999999999999999999999876542


Q ss_pred             ------CCcCCCcccCcccccC-CCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchh---H
Q 047245          261 ------SLIATSAYSAPECFQN-RSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAR---E  330 (380)
Q Consensus       261 ------~~~~~~~y~aPE~~~~-~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~  330 (380)
                            ...+|+.|+|||.+.+ ..++.++||||||+++|||++|+.||.......     ....+..........   .
T Consensus       153 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-----~~~~i~~~~~~~~~~~~~~  227 (324)
T 3mtl_A          153 PTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE-----QLHFIFRILGTPTEETWPG  227 (324)
T ss_dssp             ----------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-----HHHHHHHHHCCCCTTTSTT
T ss_pred             CccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-----HHHHHHHHhCCCChHhchh
Confidence                  2357999999999876 568999999999999999999999986421110     011111111000000   0


Q ss_pred             hhc---------hhccCCc---ccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          331 ALD---------RSILGEE---VEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       331 ~~~---------~~~~~~~---~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      ...         +......   ........+.+++.+||+.||++|||++|+++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  281 (324)
T 3mtl_A          228 ILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK  281 (324)
T ss_dssp             GGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             hhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence            000         0000000   00112355789999999999999999999975


No 204
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00  E-value=3.7e-41  Score=308.28  Aligned_cols=249  Identities=23%  Similarity=0.378  Sum_probs=198.3

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCCh-hhhcHHHHHHHHHHHHHHHcCC-CCCcceeeEEEecCCeEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSP-EKQNKSVKRRIQQELEVLASLR-HRNLMSLRAYVPESSRFY  177 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~-~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~  177 (380)
                      ..+.||+|+||.||++... +|+.||+|.+........ ........+.+.+|+.++++++ ||||+++++++.+.+..+
T Consensus        21 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~  100 (298)
T 1phk_A           21 PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFF  100 (298)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred             eeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEE
Confidence            4578999999999999974 689999999976432211 1122345678889999999995 999999999999999999


Q ss_pred             EEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCccc
Q 047245          178 LVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKL  257 (380)
Q Consensus       178 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~  257 (380)
                      +||||+++++|.+++..    ...+++..+..++.|++.||+|||   +.+++||||+|+||+++.++.+||+|||++..
T Consensus       101 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~  173 (298)
T 1phk_A          101 LVFDLMKKGELFDYLTE----KVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ  173 (298)
T ss_dssp             EEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEEeccCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEecccchhh
Confidence            99999999999999974    346899999999999999999999   89999999999999999999999999999976


Q ss_pred             CCC-----CCcCCCcccCccccc------CCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhc
Q 047245          258 MPG-----SLIATSAYSAPECFQ------NRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAG  326 (380)
Q Consensus       258 ~~~-----~~~~~~~y~aPE~~~------~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~  326 (380)
                      ...     ...+++.|+|||.+.      ...++.++||||||+++|||++|..||...        .............
T Consensus       174 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~--------~~~~~~~~~~~~~  245 (298)
T 1phk_A          174 LDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR--------KQMLMLRMIMSGN  245 (298)
T ss_dssp             CCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHTC
T ss_pred             cCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCc--------cHHHHHHHHhcCC
Confidence            543     235889999999985      456889999999999999999999998531        1111112111111


Q ss_pred             chhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          327 EAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      .       .. ...........+.+++.+||+.||++|||+.|+++
T Consensus       246 ~-------~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          246 Y-------QF-GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             C-------CC-CTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             c-------cc-CcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence            0       00 00111234456889999999999999999999985


No 205
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00  E-value=3.3e-41  Score=331.03  Aligned_cols=248  Identities=23%  Similarity=0.364  Sum_probs=192.4

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCCh-----hhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCC
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSP-----EKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESS  174 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~-----~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  174 (380)
                      ..+.||+|+||.||++... ++..||+|++........     ........+.+.+|+.++++++||||+++++++.+..
T Consensus        40 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~  119 (504)
T 3q5i_A           40 KVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKK  119 (504)
T ss_dssp             EEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred             EEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC
Confidence            4578999999999999974 578999999976322110     0001123467889999999999999999999999999


Q ss_pred             eEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCC---ceEEec
Q 047245          175 RFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEF---TPRLAD  251 (380)
Q Consensus       175 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~---~~kl~D  251 (380)
                      ..++||||+++|+|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+|||++.++   .+||+|
T Consensus       120 ~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~D  192 (504)
T 3q5i_A          120 YFYLVTEFYEGGELFEQIIN----RHKFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVD  192 (504)
T ss_dssp             EEEEEEECCTTCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTTCCSSEEECC
T ss_pred             EEEEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCCccEEEEE
Confidence            99999999999999999874    346999999999999999999999   89999999999999998775   699999


Q ss_pred             cCCcccCCC-----CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhc
Q 047245          252 FGLAKLMPG-----SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAG  326 (380)
Q Consensus       252 fgl~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~  326 (380)
                      ||++.....     ...||+.|+|||.+. +.++.++||||+|+++|+|++|..||...        .............
T Consensus       193 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~--------~~~~~~~~i~~~~  263 (504)
T 3q5i_A          193 FGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQ--------NDQDIIKKVEKGK  263 (504)
T ss_dssp             CTTCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHCC
T ss_pred             CCCCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCC--------CHHHHHHHHHcCC
Confidence            999986543     345899999999987 46899999999999999999999998641        1122222222111


Q ss_pred             chhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          327 EAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      ..   .+..     .....+..+.+++.+||+.||.+|||++|+++
T Consensus       264 ~~---~~~~-----~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~  301 (504)
T 3q5i_A          264 YY---FDFN-----DWKNISDEAKELIKLMLTYDYNKRCTAEEALN  301 (504)
T ss_dssp             CC---CCHH-----HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CC---CCcc-----ccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            00   0000     00123456889999999999999999999874


No 206
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00  E-value=9.6e-42  Score=312.79  Aligned_cols=241  Identities=23%  Similarity=0.329  Sum_probs=190.2

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++... +|..+|+|.+....        ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        23 i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   94 (302)
T 2j7t_A           23 IVGELGDGAFGKVYKAKNKETGALAAAKVIETKS--------EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIM   94 (302)
T ss_dssp             EEEEEECSTTCCEEEEEETTTCCEEEEEEEC------------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEE
T ss_pred             ecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC--------HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEE
Confidence            3467999999999999985 58899999986521        11236788999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccC-
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLM-  258 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~-  258 (380)
                      |||+++++|.+++..   ....+++..+..++.|++.||+|||   +.+++||||||+||+++.++.+||+|||++... 
T Consensus        95 ~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  168 (302)
T 2j7t_A           95 IEFCPGGAVDAIMLE---LDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNL  168 (302)
T ss_dssp             EECCTTEEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHH
T ss_pred             EEeCCCCcHHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCcccc
Confidence            999999999999874   2446899999999999999999999   889999999999999999999999999987432 


Q ss_pred             -----CCCCcCCCcccCcccc-----cCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcch
Q 047245          259 -----PGSLIATSAYSAPECF-----QNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEA  328 (380)
Q Consensus       259 -----~~~~~~~~~y~aPE~~-----~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~  328 (380)
                           .....+++.|+|||.+     .+..++.++||||||+++|||++|..||...        .............. 
T Consensus       169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--------~~~~~~~~~~~~~~-  239 (302)
T 2j7t_A          169 KTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL--------NPMRVLLKIAKSDP-  239 (302)
T ss_dssp             HHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTS--------CHHHHHHHHHHSCC-
T ss_pred             ccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccC--------CHHHHHHHHhccCC-
Confidence                 2334689999999998     4677899999999999999999999998642        11111111111110 


Q ss_pred             hHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          329 REALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                           +.   ...+......+.+++.+||+.||++|||+.++++
T Consensus       240 -----~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          240 -----PT---LLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             -----CC---CSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred             -----cc---cCCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence                 00   0111223456889999999999999999999875


No 207
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.1e-41  Score=318.71  Aligned_cols=254  Identities=25%  Similarity=0.306  Sum_probs=190.3

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++... +|+.||+|++.......   ......+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        14 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   90 (346)
T 1ua2_A           14 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSE---AKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLV   90 (346)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC---------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEE
T ss_pred             EEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcch---hhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEE
Confidence            4578999999999999974 68999999987522111   1112235678999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||+++ +|.+++..   ....+++..+..++.|++.||+|||   +.+++||||||+||+++.++.+||+|||+++...
T Consensus        91 ~e~~~~-~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~  163 (346)
T 1ua2_A           91 FDFMET-DLEVIIKD---NSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFG  163 (346)
T ss_dssp             EECCSE-EHHHHHTT---CCSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTT
T ss_pred             EEcCCC-CHHHHHHh---cCcCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEecccceecc
Confidence            999986 89888863   3456888999999999999999999   8999999999999999999999999999998654


Q ss_pred             C------CCcCCCcccCcccccCC-CCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHh-hcc--hh
Q 047245          260 G------SLIATSAYSAPECFQNR-SYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQH-AGE--AR  329 (380)
Q Consensus       260 ~------~~~~~~~y~aPE~~~~~-~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~-~~~--~~  329 (380)
                      .      ...+|+.|+|||.+.+. .++.++||||||+++|||++|..||...        ...+....... .+.  ..
T Consensus       164 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~--------~~~~~~~~i~~~~~~~~~~  235 (346)
T 1ua2_A          164 SPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGD--------SDLDQLTRIFETLGTPTEE  235 (346)
T ss_dssp             SCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHHHCCCCTT
T ss_pred             CCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCC--------CHHHHHHHHHHHcCCCChh
Confidence            2      23589999999999764 5889999999999999999999998632        11111111111 000  00


Q ss_pred             Hhhc------hhccC--Ccc-----cHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          330 EALD------RSILG--EEV-----EEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       330 ~~~~------~~~~~--~~~-----~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      .+-+      .....  ...     .......+.+++.+||+.||++|||++|+++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  291 (346)
T 1ua2_A          236 QWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK  291 (346)
T ss_dssp             TSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             hhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence            0000      00000  000     0123456889999999999999999999985


No 208
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00  E-value=3.5e-42  Score=325.21  Aligned_cols=248  Identities=11%  Similarity=0.023  Sum_probs=176.6

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHH---HHHHcCCCCCcceee-------EE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQEL---EVLASLRHRNLMSLR-------AY  169 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~---~~l~~l~h~niv~l~-------~~  169 (380)
                      ..+.||+|+||.||++.. .+|+.||+|++......     .....+.+.+|+   ..++. +||||++++       ++
T Consensus        66 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~  139 (371)
T 3q60_A           66 LVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAEN-----SRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDA  139 (371)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTT-----HHHHHHHHHHHHHHHHHHHC-----------CBCCCCEE
T ss_pred             eeeeccCCCCEEEEEEEECCCCceeEEEEEEecccc-----cccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehh
Confidence            457899999999999996 47899999999863221     233456677784   55555 799988754       44


Q ss_pred             EecC-----------------CeEEEEEeecCCCCHHHHHHHhhhcccCCCHHHH------HHHHHHHHHHHHHhHhcCC
Q 047245          170 VPES-----------------SRFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVR------LRIAVGVIKGLQYLHFTCN  226 (380)
Q Consensus       170 ~~~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~------~~i~~~ia~~l~~LH~~~~  226 (380)
                      +...                 ...++||||++ |+|.+++....   ..+.+..+      +.++.|++.||+|||   +
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~---~~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~  212 (371)
T 3q60_A          140 VAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD---FVYVFRGDEGILALHILTAQLIRLAANLQ---S  212 (371)
T ss_dssp             EEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH---HSCCCCHHHHHHHHHHHHHHHHHHHHHHH---H
T ss_pred             eecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc---cccchhhhhhhhhHHHHHHHHHHHHHHHH---H
Confidence            4322                 34799999998 89999998532   23455566      788899999999999   8


Q ss_pred             CCeEecCCCCCcEEeCCCCceEEeccCCcccCCCC---CcCCCcccCcccccC--CCCCCcchhhHHHHHHHHHHhCCCC
Q 047245          227 PQILHYNLKPTNVMLDAEFTPRLADFGLAKLMPGS---LIATSAYSAPECFQN--RSYTDKSDIFSFGMILAVLLTGRDP  301 (380)
Q Consensus       227 ~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~---~~~~~~y~aPE~~~~--~~~~~~sDv~s~Gvil~el~tg~~p  301 (380)
                      .+++||||||+|||++.++.+||+|||+++.....   ..+++.|+|||.+.+  ..++.++||||||+++|||++|+.|
T Consensus       213 ~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~P  292 (371)
T 3q60_A          213 KGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLP  292 (371)
T ss_dssp             TTEEETTCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCS
T ss_pred             CCCccCcCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCC
Confidence            99999999999999999999999999999876643   357799999999987  7799999999999999999999999


Q ss_pred             CCchhhhccCCCCHHHHHHHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          302 TAPFFAEAASGGSLGRWLRHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       302 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      |...........          ............... .........+.+++.+||+.||++|||+.|+++
T Consensus       293 f~~~~~~~~~~~----------~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  352 (371)
T 3q60_A          293 FGLVTPGIKGSW----------KRPSLRVPGTDSLAF-GSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME  352 (371)
T ss_dssp             TTBCCTTCTTCC----------CBCCTTSCCCCSCCC-TTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred             CCCcCcccccch----------hhhhhhhccccccch-hhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            975311111000          000000000000000 001123556889999999999999999999874


No 209
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00  E-value=3.1e-41  Score=313.38  Aligned_cols=247  Identities=23%  Similarity=0.323  Sum_probs=190.7

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCC-CCCcceeeEEEec--CCeE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLR-HRNLMSLRAYVPE--SSRF  176 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~--~~~~  176 (380)
                      ..+.||+|+||.||++.. .+++.||+|++....           .+.+.+|+.++++++ ||||+++++++.+  ....
T Consensus        40 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----------~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~  108 (330)
T 3nsz_A           40 LVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK-----------KKKIKREIKILENLRGGPNIITLADIVKDPVSRTP  108 (330)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC-----------HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCE
T ss_pred             EEEEecccCCeEEEEEEECCCCcEEEEEEecccc-----------hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCce
Confidence            456899999999999986 678999999986411           266889999999996 9999999999987  6678


Q ss_pred             EEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCC-ceEEeccCCc
Q 047245          177 YLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEF-TPRLADFGLA  255 (380)
Q Consensus       177 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~-~~kl~Dfgl~  255 (380)
                      ++||||+++++|.+++.       .+++..+..++.|++.||+|||   +.+++||||||+|||++.++ .+||+|||++
T Consensus       109 ~lv~e~~~~~~l~~~~~-------~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a  178 (330)
T 3nsz_A          109 ALVFEHVNNTDFKQLYQ-------TLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA  178 (330)
T ss_dssp             EEEEECCCCCCHHHHGG-------GCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred             EEEEeccCchhHHHHHH-------hCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCc
Confidence            99999999999999875       3888999999999999999999   89999999999999999776 8999999999


Q ss_pred             ccCCC-----CCcCCCcccCcccccC-CCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchh
Q 047245          256 KLMPG-----SLIATSAYSAPECFQN-RSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAR  329 (380)
Q Consensus       256 ~~~~~-----~~~~~~~y~aPE~~~~-~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~  329 (380)
                      +....     ...+++.|+|||.+.+ ..++.++||||||+++|||++|..||.......   ..+..... ........
T Consensus       179 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~---~~l~~~~~-~~~~~~~~  254 (330)
T 3nsz_A          179 EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY---DQLVRIAK-VLGTEDLY  254 (330)
T ss_dssp             EECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHH---HHHHHHHH-HHCHHHHH
T ss_pred             eEcCCCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchH---HHHHHHHH-hcCCchhh
Confidence            76542     2358889999999977 678999999999999999999999985311110   00111100 00111111


Q ss_pred             Hhhchhc----------------------cCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          330 EALDRSI----------------------LGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       330 ~~~~~~~----------------------~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      +.++...                      ............+.+++.+||+.||++|||++|+++
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  319 (330)
T 3nsz_A          255 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  319 (330)
T ss_dssp             HHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             hHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            1111000                      000111123566889999999999999999999986


No 210
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00  E-value=5.2e-41  Score=316.01  Aligned_cols=257  Identities=21%  Similarity=0.325  Sum_probs=191.0

Q ss_pred             cccccCccCCeeEEEEEecCCcEEEEEEeeeccCCCh---hhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEe-----c
Q 047245          101 ENRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSP---EKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVP-----E  172 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~---~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-----~  172 (380)
                      ..+.||+|+||.||++...+|..||||++........   ........+.+.+|+.++++++||||+++++++.     .
T Consensus        26 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  105 (362)
T 3pg1_A           26 VQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPA  105 (362)
T ss_dssp             EEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTT
T ss_pred             EeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCC
Confidence            4578999999999999988899999999976433221   1123445578999999999999999999999984     3


Q ss_pred             CCeEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEecc
Q 047245          173 SSRFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADF  252 (380)
Q Consensus       173 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Df  252 (380)
                      ....++||||++ |+|.+++..   ....+++..+..++.|++.||+|||   +.+++||||||+||+++.++.+||+||
T Consensus       106 ~~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Df  178 (362)
T 3pg1_A          106 MHKLYLVTELMR-TDLAQVIHD---QRIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILLADNNDITICDF  178 (362)
T ss_dssp             CCEEEEEEECCS-EEHHHHHHC---TTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCT
T ss_pred             cceEEEEEccCC-CCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChHHEEEcCCCCEEEEec
Confidence            347899999997 689888863   3446999999999999999999999   889999999999999999999999999


Q ss_pred             CCcccCCC-----CCcCCCcccCcccccC-CCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHH---
Q 047245          253 GLAKLMPG-----SLIATSAYSAPECFQN-RSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQ---  323 (380)
Q Consensus       253 gl~~~~~~-----~~~~~~~y~aPE~~~~-~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~---  323 (380)
                      |+++....     ...+++.|+|||.+.+ ..++.++||||||+++|||++|+.||....        ..+......   
T Consensus       179 g~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~--------~~~~~~~i~~~~  250 (362)
T 3pg1_A          179 NLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGST--------FYNQLNKIVEVV  250 (362)
T ss_dssp             TC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS--------HHHHHHHHHHHH
T ss_pred             CcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHHHc
Confidence            99975432     2358889999999877 678999999999999999999999986421        111111110   


Q ss_pred             hhc-----------chhHhhchhccCC------cccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          324 HAG-----------EAREALDRSILGE------EVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       324 ~~~-----------~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      ...           ...+.+.......      .........+.+++.+||+.||++|||+.|+++
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  316 (362)
T 3pg1_A          251 GTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR  316 (362)
T ss_dssp             CCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence            000           0011111111000      001122455889999999999999999999985


No 211
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=2.8e-41  Score=320.41  Aligned_cols=251  Identities=20%  Similarity=0.326  Sum_probs=188.9

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEec-------
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPE-------  172 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-------  172 (380)
                      ..+.||+|+||.||++.. .+|+.||+|++....            ....+|+++++.++||||+++++++..       
T Consensus        11 ~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~------------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~   78 (383)
T 3eb0_A           11 LGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP------------RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK   78 (383)
T ss_dssp             EEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT------------TSCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred             EEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc------------chHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence            457899999999999986 678999999986521            112369999999999999999999843       


Q ss_pred             -------------------------------CCeEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHh
Q 047245          173 -------------------------------SSRFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYL  221 (380)
Q Consensus       173 -------------------------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~L  221 (380)
                                                     ....++||||++ |+|.+.+.........+++..+..++.|++.||+||
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L  157 (383)
T 3eb0_A           79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI  157 (383)
T ss_dssp             -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence                                           334889999998 599998886555667899999999999999999999


Q ss_pred             HhcCCCCeEecCCCCCcEEeC-CCCceEEeccCCcccCCC-----CCcCCCcccCcccccCC-CCCCcchhhHHHHHHHH
Q 047245          222 HFTCNPQILHYNLKPTNVMLD-AEFTPRLADFGLAKLMPG-----SLIATSAYSAPECFQNR-SYTDKSDIFSFGMILAV  294 (380)
Q Consensus       222 H~~~~~~iiH~dlk~~Nill~-~~~~~kl~Dfgl~~~~~~-----~~~~~~~y~aPE~~~~~-~~~~~sDv~s~Gvil~e  294 (380)
                      |   +.+++||||||+|||++ .++.+||+|||+++....     ...+|+.|+|||.+.+. .++.++||||+|+++||
T Consensus       158 H---~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e  234 (383)
T 3eb0_A          158 H---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGE  234 (383)
T ss_dssp             H---TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHH
T ss_pred             H---HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHH
Confidence            9   99999999999999997 688999999999986532     23588999999998764 48999999999999999


Q ss_pred             HHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhh--c--------hhccCCc----ccHHHHHHHHHHHHHcccCC
Q 047245          295 LLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREAL--D--------RSILGEE----VEEDEMLMAVRIAVVCLSDS  360 (380)
Q Consensus       295 l~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~--------~~~~~~~----~~~~~~~~~~~l~~~Cl~~~  360 (380)
                      |++|+.||......    ..+....... .........  +        +......    .+......+.+++.+||+.|
T Consensus       235 ll~g~~pf~~~~~~----~~~~~i~~~~-g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  309 (383)
T 3eb0_A          235 LILGKPLFSGETSI----DQLVRIIQIM-GTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYE  309 (383)
T ss_dssp             HHHSSCSSCCSSHH----HHHHHHHHHH-CCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSS
T ss_pred             HHhCCCCCCCCChH----HHHHHHHHHh-CCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCC
Confidence            99999998642110    0111111100 000000000  0        0000000    11123455889999999999


Q ss_pred             CCCCCCHHhHHH
Q 047245          361 PADRPSSDELVP  372 (380)
Q Consensus       361 P~~RPs~~evl~  372 (380)
                      |++|||+.|+++
T Consensus       310 P~~R~t~~e~l~  321 (383)
T 3eb0_A          310 PDLRINPYEAMA  321 (383)
T ss_dssp             GGGSCCHHHHHT
T ss_pred             hhhCCCHHHHhc
Confidence            999999999973


No 212
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00  E-value=2.7e-41  Score=313.30  Aligned_cols=240  Identities=23%  Similarity=0.382  Sum_probs=188.2

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcC-CCCCcceeeEEEec------
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASL-RHRNLMSLRAYVPE------  172 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~------  172 (380)
                      ..+.||+|+||.||+|.. .+|+.||+|++.....         ....+.+|+.+++++ +||||+++++++..      
T Consensus        28 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---------~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~   98 (326)
T 2x7f_A           28 LVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD---------EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM   98 (326)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS---------TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CC
T ss_pred             EEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc---------cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccc
Confidence            457899999999999997 5789999999875221         125688999999999 89999999999876      


Q ss_pred             CCeEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEecc
Q 047245          173 SSRFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADF  252 (380)
Q Consensus       173 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Df  252 (380)
                      .+..++||||+++|+|.+++...  ....+++..+..++.|++.||+|||   +.+++||||||+||+++.++.+||+||
T Consensus        99 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~kl~Df  173 (326)
T 2x7f_A           99 DDQLWLVMEFCGAGSVTDLIKNT--KGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDF  173 (326)
T ss_dssp             CCEEEEEEECCTTEEHHHHHHHS--GGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCC
T ss_pred             cceEEEEEEcCCCCcHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEcCCCCEEEeeC
Confidence            46889999999999999999853  2457899999999999999999999   889999999999999999999999999


Q ss_pred             CCcccCCC------CCcCCCcccCccccc-----CCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHH
Q 047245          253 GLAKLMPG------SLIATSAYSAPECFQ-----NRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRH  321 (380)
Q Consensus       253 gl~~~~~~------~~~~~~~y~aPE~~~-----~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~  321 (380)
                      |++.....      ...+++.|+|||.+.     +..++.++||||||+++|||++|..||...        ....-...
T Consensus       174 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--------~~~~~~~~  245 (326)
T 2x7f_A          174 GVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM--------HPMRALFL  245 (326)
T ss_dssp             TTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTS--------CHHHHHHH
T ss_pred             cCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCC--------cHHHHHHH
Confidence            99876542      235899999999987     567899999999999999999999998531        11111111


Q ss_pred             HHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          322 LQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      .....      .+....    ......+.+++.+||+.||.+|||++++++
T Consensus       246 ~~~~~------~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  286 (326)
T 2x7f_A          246 IPRNP------APRLKS----KKWSKKFQSFIESCLVKNHSQRPATEQLMK  286 (326)
T ss_dssp             HHHSC------CCCCSC----SCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             hhcCc------cccCCc----cccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence            11110      111111    122345789999999999999999999986


No 213
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00  E-value=4.4e-41  Score=307.93  Aligned_cols=253  Identities=24%  Similarity=0.375  Sum_probs=191.4

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++... +|+.||+|++.....      .......+.+|+.++++++||||+++++++.+.+..++|
T Consensus         7 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (299)
T 2r3i_A            7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE------TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV   80 (299)
T ss_dssp             EEEEEEECSSSEEEEEEETTTCCEEEEEEC--------------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hhhhhccCCCeeEEEEEEcCCCceEEEEEeecCcc------chhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEE
Confidence            3467999999999999974 789999999865221      112236778999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||++ |+|.+++...  ....+++..+..++.|++.||+|||   +.+++||||||+||+++.++.+||+|||++....
T Consensus        81 ~e~~~-~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~  154 (299)
T 2r3i_A           81 FEFLH-QDLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG  154 (299)
T ss_dssp             EECCS-EEHHHHHHHT--TTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHC
T ss_pred             EEccc-CCHHHHHHhh--hccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHeEEcCCCCEEECcchhhhhcc
Confidence            99997 6999998752  2346889999999999999999999   8899999999999999999999999999986533


Q ss_pred             ------CCCcCCCcccCcccccCCC-CCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhh
Q 047245          260 ------GSLIATSAYSAPECFQNRS-YTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREAL  332 (380)
Q Consensus       260 ------~~~~~~~~y~aPE~~~~~~-~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  332 (380)
                            ....+++.|+|||.+.+.. ++.++||||||+++|||++|+.||.....       ...........+...+..
T Consensus       155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-------~~~~~~~~~~~~~~~~~~  227 (299)
T 2r3i_A          155 VPVRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-------IDQLFRIFRTLGTPDEVV  227 (299)
T ss_dssp             CCSBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-------HHHHHHHHHHHCCCCTTT
T ss_pred             CCccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccH-------HHHHHHHHHHhCCCchhh
Confidence                  2235789999999998765 79999999999999999999999864211       111111111111000000


Q ss_pred             ----------chhccC---Cc---ccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          333 ----------DRSILG---EE---VEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       333 ----------~~~~~~---~~---~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                                .+....   ..   ........+.+++.+|++.||++|||+.|+++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~  283 (299)
T 2r3i_A          228 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA  283 (299)
T ss_dssp             STTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hhHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence                      000000   00   00113456789999999999999999999986


No 214
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00  E-value=3.1e-41  Score=340.96  Aligned_cols=235  Identities=23%  Similarity=0.268  Sum_probs=193.1

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcC-CCCCcceeeEEEecCCeEEE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASL-RHRNLMSLRAYVPESSRFYL  178 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l  178 (380)
                      ..+.||+|+||.||++.. .+++.||||++.....     ......+.+..|..++..+ +||||+.+++++.+.+..++
T Consensus       345 ~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~-----~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l  419 (674)
T 3pfq_A          345 FLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVV-----IQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF  419 (674)
T ss_dssp             EEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHH-----HHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred             EEEEEccCCCEEEEEEEECCCCcEEEEEEEecccc-----ccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence            346899999999999997 4688999999975211     0112236678899999998 79999999999999999999


Q ss_pred             EEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccC
Q 047245          179 VYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLM  258 (380)
Q Consensus       179 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~  258 (380)
                      ||||+++|+|.+++..    ...+++..+..++.||+.||+|||   +.+|+||||||+|||++.++.+||+|||+++..
T Consensus       420 V~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~  492 (674)
T 3pfq_A          420 VMEYVNGGDLMYHIQQ----VGRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN  492 (674)
T ss_dssp             EEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTCEEC
T ss_pred             EEeCcCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeecceeecc
Confidence            9999999999999975    346999999999999999999999   899999999999999999999999999999853


Q ss_pred             C------CCCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhh
Q 047245          259 P------GSLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREAL  332 (380)
Q Consensus       259 ~------~~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  332 (380)
                      .      ....||+.|+|||.+.+..++.++||||||+++|||++|..||...        +..+.........      
T Consensus       493 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~--------~~~~~~~~i~~~~------  558 (674)
T 3pfq_A          493 IWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE--------DEDELFQSIMEHN------  558 (674)
T ss_dssp             CCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHSSC------
T ss_pred             ccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCC--------CHHHHHHHHHhCC------
Confidence            2      2345899999999999999999999999999999999999999641        1222222222111      


Q ss_pred             chhccCCcccHHHHHHHHHHHHHcccCCCCCCCCH
Q 047245          333 DRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSS  367 (380)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~  367 (380)
                            ...+......+.+++.+||+.||++||++
T Consensus       559 ------~~~p~~~s~~~~~li~~lL~~dP~~R~~~  587 (674)
T 3pfq_A          559 ------VAYPKSMSKEAVAICKGLMTKHPGKRLGC  587 (674)
T ss_dssp             ------CCCCTTSCHHHHHHHHHHSCSSSTTCTTC
T ss_pred             ------CCCCccCCHHHHHHHHHHccCCHHHCCCC
Confidence                  11222345568899999999999999998


No 215
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00  E-value=2.1e-42  Score=317.16  Aligned_cols=252  Identities=23%  Similarity=0.385  Sum_probs=179.5

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++.. .+++.||+|++....       .....+.+.+|+.++++++||||+++++++...+..++|
T Consensus        19 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   91 (303)
T 2vwi_A           19 LQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEK-------CQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV   91 (303)
T ss_dssp             EEEECC---CCCEEEEEC----CEEEEECCC-----------------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred             hhheeccccceEEEEEEECCCCcEEEEEEEEhhh-------cchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence            457899999999999986 468999999886421       122346788999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhh----cccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCc
Q 047245          180 YDYLQTGSLEDAMDRIRE----NQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLA  255 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~----~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~  255 (380)
                      |||+++|+|.+++.....    ....+++..++.++.|++.||+|||   +.+++||||||+||+++.++.+||+|||++
T Consensus        92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~  168 (303)
T 2vwi_A           92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVS  168 (303)
T ss_dssp             EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred             ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEeccch
Confidence            999999999999975322    2345899999999999999999999   889999999999999999999999999998


Q ss_pred             ccCCC-----------CCcCCCcccCcccccC-CCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHH
Q 047245          256 KLMPG-----------SLIATSAYSAPECFQN-RSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQ  323 (380)
Q Consensus       256 ~~~~~-----------~~~~~~~y~aPE~~~~-~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~  323 (380)
                      .....           ...+++.|+|||.+.+ ..++.++||||||+++|||++|..||......       ...... .
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~~-~  240 (303)
T 2vwi_A          169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM-------KVLMLT-L  240 (303)
T ss_dssp             HHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGG-------GHHHHH-H
T ss_pred             heeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchh-------hHHHHH-h
Confidence            65432           2358899999999876 56899999999999999999999998642111       000111 1


Q ss_pred             hhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          324 HAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      .... . .+................+.+++.+||+.||.+|||+.|+++
T Consensus       241 ~~~~-~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  287 (303)
T 2vwi_A          241 QNDP-P-SLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR  287 (303)
T ss_dssp             TSSC-C-CTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             ccCC-C-ccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence            0000 0 000000000011122345789999999999999999999985


No 216
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00  E-value=1.5e-40  Score=309.32  Aligned_cols=258  Identities=20%  Similarity=0.243  Sum_probs=197.1

Q ss_pred             cccccCccCCeeEEEEEe--cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCC------CcceeeEEEec
Q 047245          101 ENRLLGSSPDGKYYRTVL--DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHR------NLMSLRAYVPE  172 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~--~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~------niv~l~~~~~~  172 (380)
                      ..+.||+|+||.||++..  .+|+.||+|++..         .....+.+.+|+.+++.++|+      +++++++++.+
T Consensus        18 ~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~---------~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~   88 (339)
T 1z57_A           18 IVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKN---------VDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH   88 (339)
T ss_dssp             EEEEEEEETTEEEEEEEETTTTTEEEEEEEECS---------SHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE
T ss_pred             EEEEEecCCCeEEEEEEecCCCCcEEEEEEEec---------CCchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc
Confidence            456899999999999986  4688999999864         123346788899999888765      49999999999


Q ss_pred             CCeEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCC---------
Q 047245          173 SSRFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDA---------  243 (380)
Q Consensus       173 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~---------  243 (380)
                      .+..++||||+ +++|.+++..  .....+++..+..++.|++.||+|||   +.+++||||||+|||++.         
T Consensus        89 ~~~~~lv~e~~-~~~l~~~l~~--~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~  162 (339)
T 1z57_A           89 HGHICIVFELL-GLSTYDFIKE--NGFLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNP  162 (339)
T ss_dssp             TTEEEEEEECC-CCBHHHHHHH--TTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC-
T ss_pred             CCcEEEEEcCC-CCCHHHHHHh--cCCCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCC
Confidence            99999999999 8899999974  22346899999999999999999999   899999999999999987         


Q ss_pred             ----------CCceEEeccCCcccCCC---CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhcc
Q 047245          244 ----------EFTPRLADFGLAKLMPG---SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAA  310 (380)
Q Consensus       244 ----------~~~~kl~Dfgl~~~~~~---~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~  310 (380)
                                ++.+||+|||+++....   ...+|+.|+|||.+.+..++.++||||||+++|||++|..||....... 
T Consensus       163 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-  241 (339)
T 1z57_A          163 KIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE-  241 (339)
T ss_dssp             ---CEEEEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH-
T ss_pred             ccccccccccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH-
Confidence                      66899999999986543   3468999999999999999999999999999999999999986421110 


Q ss_pred             CCCCHHHHHHHHHhhcc-----------------------------hhHhhchhccCCcccHHHHHHHHHHHHHcccCCC
Q 047245          311 SGGSLGRWLRHLQHAGE-----------------------------AREALDRSILGEEVEEDEMLMAVRIAVVCLSDSP  361 (380)
Q Consensus       311 ~~~~l~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P  361 (380)
                          ....+........                             ......+..............+.+++.+||+.||
T Consensus       242 ----~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP  317 (339)
T 1z57_A          242 ----HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDP  317 (339)
T ss_dssp             ----HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSST
T ss_pred             ----HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCc
Confidence                0000111000000                             0000000000011123456778999999999999


Q ss_pred             CCCCCHHhHHH--HHhccc
Q 047245          362 ADRPSSDELVP--MLTQLH  378 (380)
Q Consensus       362 ~~RPs~~evl~--~L~~l~  378 (380)
                      ++|||++|+++  .+++++
T Consensus       318 ~~Rpt~~ell~hp~f~~~~  336 (339)
T 1z57_A          318 AKRITLREALKHPFFDLLK  336 (339)
T ss_dssp             TTSCCHHHHTTSGGGGGGG
T ss_pred             ccccCHHHHhcCHHHHHHh
Confidence            99999999984  354443


No 217
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00  E-value=3.6e-41  Score=320.58  Aligned_cols=256  Identities=21%  Similarity=0.261  Sum_probs=194.2

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCC--------CCCcceeeEEEe
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLR--------HRNLMSLRAYVP  171 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~  171 (380)
                      ..+.||+|+||.||++.. .+|+.||+|++..         .....+.+.+|+.++++++        |+||+++++++.
T Consensus        41 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---------~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~  111 (397)
T 1wak_A           41 VIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKS---------AEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFK  111 (397)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEECS---------CHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEE
T ss_pred             EEEEeeecCCeeEEEEEecCCCeEEEEEEEec---------CCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeeccee
Confidence            456899999999999986 5688999999864         1234567889999999985        788999999987


Q ss_pred             ----cCCeEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCC-CeEecCCCCCcEEeCCCC-
Q 047245          172 ----ESSRFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNP-QILHYNLKPTNVMLDAEF-  245 (380)
Q Consensus       172 ----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~-~iiH~dlk~~Nill~~~~-  245 (380)
                          +....++||||+ +++|.+++..  .....+++..+..++.|++.||+|||   +. +++||||||+|||++.++ 
T Consensus       112 ~~~~~~~~~~lv~e~~-~~~l~~~~~~--~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp~NIll~~~~~  185 (397)
T 1wak_A          112 ISGVNGTHICMVFEVL-GHHLLKWIIK--SNYQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKPENILLSVNEQ  185 (397)
T ss_dssp             EEETTEEEEEEEECCC-CCBHHHHHHH--TTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSGGGEEECCCHH
T ss_pred             ecCCCCceEEEEEecc-CccHHHHHHh--cccCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHeeEeccch
Confidence                566889999999 6677777764  22356999999999999999999999   77 999999999999999775 


Q ss_pred             ------------------------------------------------ceEEeccCCcccCCC---CCcCCCcccCcccc
Q 047245          246 ------------------------------------------------TPRLADFGLAKLMPG---SLIATSAYSAPECF  274 (380)
Q Consensus       246 ------------------------------------------------~~kl~Dfgl~~~~~~---~~~~~~~y~aPE~~  274 (380)
                                                                      .+||+|||+++....   ...+|+.|+|||.+
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~  265 (397)
T 1wak_A          186 YIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVL  265 (397)
T ss_dssp             HHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHH
T ss_pred             hhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhh
Confidence                                                            799999999976543   34589999999999


Q ss_pred             cCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcch-h----------Hhhch---------
Q 047245          275 QNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEA-R----------EALDR---------  334 (380)
Q Consensus       275 ~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~-~----------~~~~~---------  334 (380)
                      .+..++.++|||||||++|||++|+.||......... .............+.. .          +.+..         
T Consensus       266 ~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  344 (397)
T 1wak_A          266 IGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYT-RDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITK  344 (397)
T ss_dssp             HTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSC-HHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCC
T ss_pred             cCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccC-chHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccc
Confidence            9999999999999999999999999999642111100 0000000000000000 0          00000         


Q ss_pred             ---------hccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          335 ---------SILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       335 ---------~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                               .......+.+....+.+++.+||+.||++|||++|+++
T Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  391 (397)
T 1wak_A          345 LKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR  391 (397)
T ss_dssp             CCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred             cCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence                     00001234567788999999999999999999999985


No 218
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00  E-value=5.3e-41  Score=323.32  Aligned_cols=189  Identities=26%  Similarity=0.425  Sum_probs=161.9

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecC-----C
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPES-----S  174 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~  174 (380)
                      ..+.||+|+||.||++.. .+|+.||||++....      ......+.+.+|+.++++++||||+++++++...     .
T Consensus        30 ~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~------~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~  103 (432)
T 3n9x_A           30 IKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMF------EDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD  103 (432)
T ss_dssp             EEEEEEEETTEEEEEEEETTTTEEEEEEEECSTT------TSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred             EEEEEeecCCEEEEEEEECCCCcEEEEEEeCchh------cChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence            457899999999999986 468899999996421      2334457889999999999999999999998766     5


Q ss_pred             eEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCC
Q 047245          175 RFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGL  254 (380)
Q Consensus       175 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl  254 (380)
                      ..++||||++ |+|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+|||++.++.+||+|||+
T Consensus       104 ~~~lv~e~~~-~~L~~~~~~----~~~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGl  175 (432)
T 3n9x_A          104 ELYIVLEIAD-SDLKKLFKT----PIFLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGL  175 (432)
T ss_dssp             CEEEEEECCS-EEHHHHHHS----SCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred             eEEEEEecCC-cCHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCC
Confidence            7899999986 599999863    456999999999999999999999   88999999999999999999999999999


Q ss_pred             cccCC----------------------------CCCcCCCcccCcccc-cCCCCCCcchhhHHHHHHHHHHhCCCCCC
Q 047245          255 AKLMP----------------------------GSLIATSAYSAPECF-QNRSYTDKSDIFSFGMILAVLLTGRDPTA  303 (380)
Q Consensus       255 ~~~~~----------------------------~~~~~~~~y~aPE~~-~~~~~~~~sDv~s~Gvil~el~tg~~p~~  303 (380)
                      ++...                            ....||+.|+|||.+ ....++.++||||+||++|||++|..||.
T Consensus       176 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~  253 (432)
T 3n9x_A          176 ARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI  253 (432)
T ss_dssp             CEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred             cccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence            98643                            223589999999986 56679999999999999999998766554


No 219
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00  E-value=6.7e-41  Score=325.54  Aligned_cols=248  Identities=21%  Similarity=0.282  Sum_probs=194.7

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCC-CCcceeeEEEecCCeEEE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRH-RNLMSLRAYVPESSRFYL  178 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~l  178 (380)
                      ..+.||+|+||.||++.. .+|+.||||++......          ..+..|+++++.++| +++..+..++.+.+..++
T Consensus        11 i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~----------~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~l   80 (483)
T 3sv0_A           11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----------PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVL   80 (483)
T ss_dssp             CCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS----------CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEE
T ss_pred             EEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc----------HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEE
Confidence            457899999999999996 67899999987653211          346789999999976 556666777778889999


Q ss_pred             EEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEe---CCCCceEEeccCCc
Q 047245          179 VYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVML---DAEFTPRLADFGLA  255 (380)
Q Consensus       179 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill---~~~~~~kl~Dfgl~  255 (380)
                      ||||+ +++|.+++...   ...+++..++.++.||+.||+|||   +.+|+||||||+|||+   +.++.+||+|||++
T Consensus        81 vme~~-g~sL~~ll~~~---~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla  153 (483)
T 3sv0_A           81 VMDLL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA  153 (483)
T ss_dssp             EEECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTC
T ss_pred             EEECC-CCCHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCcc
Confidence            99999 99999999742   346999999999999999999999   8999999999999999   58899999999999


Q ss_pred             ccCCC-------------CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHH
Q 047245          256 KLMPG-------------SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHL  322 (380)
Q Consensus       256 ~~~~~-------------~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~  322 (380)
                      +....             ...||+.|+|||.+.+..++.++||||||+++|||++|+.||.....     ..........
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~-----~~~~~~~~~i  228 (483)
T 3sv0_A          154 KKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKA-----GTKKQKYEKI  228 (483)
T ss_dssp             EECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCC-----SSHHHHHHHH
T ss_pred             eeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccc-----hhHHHHHHHH
Confidence            75432             34589999999999999999999999999999999999999964211     1111111111


Q ss_pred             HhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhcc
Q 047245          323 QHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQL  377 (380)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l  377 (380)
                      ... .....+.. +.     ......+.+++..||+.+|++||++++|++.|+++
T Consensus       229 ~~~-~~~~~~~~-l~-----~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l  276 (483)
T 3sv0_A          229 SEK-KVATSIEA-LC-----RGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL  276 (483)
T ss_dssp             HHH-HHHSCHHH-HH-----TTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred             hhc-cccccHHH-Hh-----cCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            110 00000000 00     11235688999999999999999999999999876


No 220
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00  E-value=7.6e-41  Score=304.81  Aligned_cols=242  Identities=26%  Similarity=0.373  Sum_probs=193.8

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++... +++.||+|++.......      .....+.+|+.++++++||||+++++++.+.+..++|
T Consensus        26 i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   99 (287)
T 2wei_A           26 IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN------KDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV   99 (287)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSS------SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             eeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccch------HHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence            5678999999999999974 78999999997533221      1236788999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCC---CceEEeccCCcc
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAE---FTPRLADFGLAK  256 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~---~~~kl~Dfgl~~  256 (380)
                      +||+++++|.+++..    ...+++..++.++.|++.||+|||   +.+++||||||+||+++.+   +.+||+|||++.
T Consensus       100 ~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~  172 (287)
T 2wei_A          100 GELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLST  172 (287)
T ss_dssp             ECCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGG
T ss_pred             EEccCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccCcce
Confidence            999999999998874    346899999999999999999999   8899999999999999754   479999999987


Q ss_pred             cCCCC-----CcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHh
Q 047245          257 LMPGS-----LIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREA  331 (380)
Q Consensus       257 ~~~~~-----~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  331 (380)
                      .....     ..+++.|+|||.+.+ .++.++||||||+++|+|++|..||...        ...+...........   
T Consensus       173 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~--------~~~~~~~~~~~~~~~---  240 (287)
T 2wei_A          173 CFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGK--------NEYDILKRVETGKYA---  240 (287)
T ss_dssp             TBCCCSSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHCCCC---
T ss_pred             eecCCCccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCC--------CHHHHHHHHHcCCCC---
Confidence            65432     237888999998875 4899999999999999999999998641        112222222111100   


Q ss_pred             hchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          332 LDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      .+     ..........+.+++.+||+.||++|||+.|+++
T Consensus       241 ~~-----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  276 (287)
T 2wei_A          241 FD-----LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE  276 (287)
T ss_dssp             CC-----SGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CC-----chhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence            00     0011123456889999999999999999999986


No 221
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00  E-value=3.5e-41  Score=317.60  Aligned_cols=249  Identities=25%  Similarity=0.361  Sum_probs=176.5

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecC------
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPES------  173 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------  173 (380)
                      ..+.||+|+||.||+|.. .+|+.||||++....      ......+.+.+|+.++++++||||+++++++...      
T Consensus        33 ~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~------~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~  106 (367)
T 2fst_X           33 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF  106 (367)
T ss_dssp             EEEECC----CCEEEEEETTTTEEEEEEECSSTT------SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred             EeeEEeecCCeEEEEEEECCCCCEEEEEEeCccc------cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence            346799999999999985 578999999986421      1234457788999999999999999999998654      


Q ss_pred             CeEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccC
Q 047245          174 SRFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFG  253 (380)
Q Consensus       174 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfg  253 (380)
                      ...++|+|++ +++|.+++..     ..+++..+..++.|++.||+|||   +.+++||||||+|||++.++.+||+|||
T Consensus       107 ~~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG  177 (367)
T 2fst_X          107 NDVYLVTHLM-GADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFG  177 (367)
T ss_dssp             CCCEEEEECC-CEECC----------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC--
T ss_pred             CeEEEEeccc-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeecc
Confidence            5679999999 6899998862     46999999999999999999999   8999999999999999999999999999


Q ss_pred             CcccCCC---CCcCCCcccCcccccC-CCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHh-hcch
Q 047245          254 LAKLMPG---SLIATSAYSAPECFQN-RSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQH-AGEA  328 (380)
Q Consensus       254 l~~~~~~---~~~~~~~y~aPE~~~~-~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~-~~~~  328 (380)
                      +++....   ...+|+.|+|||.+.+ ..++.++|||||||++|||++|+.||....        ..+....... .+..
T Consensus       178 ~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--------~~~~l~~i~~~~g~p  249 (367)
T 2fst_X          178 LARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD--------HIDQLKLILRLVGTP  249 (367)
T ss_dssp             -------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSS--------HHHHHHHHHHHHCSC
T ss_pred             ccccccccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHHHhCCC
Confidence            9987543   3468999999999877 678999999999999999999999986421        1111111100 0000


Q ss_pred             -------------hHhhchhccCCccc-----HHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          329 -------------REALDRSILGEEVE-----EDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       329 -------------~~~~~~~~~~~~~~-----~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                                   ...+..........     ......+.+|+.+||+.||++|||+.|+++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~  311 (367)
T 2fst_X          250 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  311 (367)
T ss_dssp             CHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence                         00000000000000     112355789999999999999999999975


No 222
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00  E-value=1.5e-40  Score=305.31  Aligned_cols=242  Identities=22%  Similarity=0.317  Sum_probs=190.2

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEe--cCCeEE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVP--ESSRFY  177 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~  177 (380)
                      ..+.||+|+||.||++.. .++..+|+|++.....    .........+.+|+.++++++||||+++++++.  +....+
T Consensus         9 i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (305)
T 2wtk_C            9 MGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKL----RRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMY   84 (305)
T ss_dssp             CCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHH----HHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEE
T ss_pred             EeeEEecCCCeEEEEEEECCCCcEEEEEEeccccc----cccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEE
Confidence            457899999999999997 4688999999975211    111233577899999999999999999999984  456789


Q ss_pred             EEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCccc
Q 047245          178 LVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKL  257 (380)
Q Consensus       178 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~  257 (380)
                      +||||++++ |.+++...  ....+++..+..++.|++.||+|||   +.+++||||||+||+++.++.+||+|||++..
T Consensus        85 lv~e~~~~~-l~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~  158 (305)
T 2wtk_C           85 MVMEYCVCG-MQEMLDSV--PEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEA  158 (305)
T ss_dssp             EEEECCSEE-HHHHHHHS--TTCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEehhccCC-HHHHHHhC--cccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeeccccccc
Confidence            999999876 88877642  2457899999999999999999999   88999999999999999999999999999976


Q ss_pred             CCC--------CCcCCCcccCcccccCCC--CCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcc
Q 047245          258 MPG--------SLIATSAYSAPECFQNRS--YTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGE  327 (380)
Q Consensus       258 ~~~--------~~~~~~~y~aPE~~~~~~--~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~  327 (380)
                      ...        ...+++.|+|||.+.+..  ++.++||||||+++|||++|..||...        ............. 
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--------~~~~~~~~i~~~~-  229 (305)
T 2wtk_C          159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD--------NIYKLFENIGKGS-  229 (305)
T ss_dssp             CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCS--------SHHHHHHHHHHCC-
T ss_pred             cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCc--------hHHHHHHHHhcCC-
Confidence            532        234899999999997644  377999999999999999999998631        1222222221110 


Q ss_pred             hhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          328 AREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                            .     ..+......+.+++.+||+.||++|||++|+++
T Consensus       230 ------~-----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  263 (305)
T 2wtk_C          230 ------Y-----AIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQ  263 (305)
T ss_dssp             ------C-----CCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             ------C-----CCCCccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence                  0     111123455789999999999999999999985


No 223
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00  E-value=7.5e-41  Score=315.28  Aligned_cols=251  Identities=24%  Similarity=0.380  Sum_probs=190.4

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecC-----C
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPES-----S  174 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~  174 (380)
                      ..+.||+|+||.||++.. .++..||+|++...       ......+.+.+|++++++++||||+++++++...     .
T Consensus        31 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-------~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~  103 (364)
T 3qyz_A           31 NLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF-------EHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK  103 (364)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEECCT-------TCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred             EEEEeecCCCeEEEEEEECCCCeEEEEEEeccc-------cCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccc
Confidence            456899999999999986 46889999998641       1234457788999999999999999999998654     4


Q ss_pred             eEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCC
Q 047245          175 RFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGL  254 (380)
Q Consensus       175 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl  254 (380)
                      ..++|+||++ |+|.+++..     ..+++..+..++.|++.||+|||   +.+++||||||+|||++.++.+||+|||+
T Consensus       104 ~~~iv~e~~~-~~L~~~l~~-----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~  174 (364)
T 3qyz_A          104 DVYIVQDLME-TDLYKLLKT-----QHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGL  174 (364)
T ss_dssp             CEEEEEECCS-EEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred             eEEEEEcccC-cCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcc
Confidence            6899999997 599998863     36899999999999999999999   89999999999999999999999999999


Q ss_pred             cccCCC---------CCcCCCcccCcccccC-CCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHh
Q 047245          255 AKLMPG---------SLIATSAYSAPECFQN-RSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQH  324 (380)
Q Consensus       255 ~~~~~~---------~~~~~~~y~aPE~~~~-~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~  324 (380)
                      ++....         ...||+.|+|||.+.+ ..++.++||||||+++|||++|+.||......    ..+.... ....
T Consensus       175 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~----~~~~~i~-~~~~  249 (364)
T 3qyz_A          175 ARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL----DQLNHIL-GILG  249 (364)
T ss_dssp             CEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGG----GHHHHHH-HHHC
T ss_pred             eEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChH----HHHHHHH-HHhC
Confidence            976542         2368999999998754 45899999999999999999999998642110    0011111 0000


Q ss_pred             hcchh-----------HhhchhccCCcc-----cHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          325 AGEAR-----------EALDRSILGEEV-----EEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       325 ~~~~~-----------~~~~~~~~~~~~-----~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      .....           ............     .......+.+++.+||+.||++|||+.|+++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  313 (364)
T 3qyz_A          250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA  313 (364)
T ss_dssp             SCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            00000           000000000000     0112456789999999999999999999985


No 224
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00  E-value=1.5e-40  Score=304.44  Aligned_cols=239  Identities=24%  Similarity=0.429  Sum_probs=186.7

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEec-------
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPE-------  172 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-------  172 (380)
                      ..+.||+|+||.||++.. .+|+.||+|++..         .....+.+.+|+.++++++||||+++++++.+       
T Consensus        10 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---------~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   80 (303)
T 1zy4_A           10 EIAVLGQGAFGQVVKARNALDSRYYAIKKIRH---------TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKP   80 (303)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEE---------EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-
T ss_pred             hhheeccCCcEEEEEEEEcCCCeEEEEEEEec---------cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhh
Confidence            457899999999999996 4789999999964         22345788999999999999999999998854       


Q ss_pred             ------CCeEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCc
Q 047245          173 ------SSRFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFT  246 (380)
Q Consensus       173 ------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~  246 (380)
                            .+..++||||+++|+|.+++..   ....+++..++.++.|++.||+|||   +.+++||||||+||+++.++.
T Consensus        81 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~  154 (303)
T 1zy4_A           81 MTAVKKKSTLFIQMEYCENGTLYDLIHS---ENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRN  154 (303)
T ss_dssp             -----CEEEEEEEEECCCSCBHHHHHHH---SCGGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSC
T ss_pred             hcccccCCceEEEEecCCCCCHHHhhhc---cccccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCC
Confidence                  3568999999999999999974   2346788899999999999999999   889999999999999999999


Q ss_pred             eEEeccCCcccCCC--------------------CCcCCCcccCcccccCC-CCCCcchhhHHHHHHHHHHhCCCCCCch
Q 047245          247 PRLADFGLAKLMPG--------------------SLIATSAYSAPECFQNR-SYTDKSDIFSFGMILAVLLTGRDPTAPF  305 (380)
Q Consensus       247 ~kl~Dfgl~~~~~~--------------------~~~~~~~y~aPE~~~~~-~~~~~sDv~s~Gvil~el~tg~~p~~~~  305 (380)
                      +||+|||++.....                    ...+++.|+|||.+.+. .++.++||||||+++|||++   ||...
T Consensus       155 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~  231 (303)
T 1zy4_A          155 VKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG  231 (303)
T ss_dssp             EEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH
T ss_pred             EEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc
Confidence            99999999976532                    22478899999999764 68999999999999999998   54321


Q ss_pred             hhhccCCCCHHHHHHHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          306 FAEAASGGSLGRWLRHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       306 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      ...       ..........       .... ...........+.+++.+||+.||.+|||++++++
T Consensus       232 ~~~-------~~~~~~~~~~-------~~~~-~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  283 (303)
T 1zy4_A          232 MER-------VNILKKLRSV-------SIEF-PPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN  283 (303)
T ss_dssp             HHH-------HHHHHHHHST-------TCCC-CTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hhH-------HHHHHhcccc-------cccc-CccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence            100       1111111110       0001 11122334456789999999999999999999986


No 225
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00  E-value=5.3e-41  Score=322.08  Aligned_cols=251  Identities=25%  Similarity=0.345  Sum_probs=187.5

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecC------
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPES------  173 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------  173 (380)
                      ..+.||+|+||.||++... +|+.||||++....            ....+|++++++++||||+++++++...      
T Consensus        58 ~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~------------~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~  125 (420)
T 1j1b_A           58 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDE  125 (420)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT------------TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTE
T ss_pred             eeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc------------hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcc
Confidence            4578999999999999984 68999999986421            1223699999999999999999988432      


Q ss_pred             CeEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCC-CceEEecc
Q 047245          174 SRFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAE-FTPRLADF  252 (380)
Q Consensus       174 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~-~~~kl~Df  252 (380)
                      ...++||||+++ +|.+.+.........+++..+..++.|++.||+|||   +.+|+||||||+|||++.+ +.+||+||
T Consensus       126 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DF  201 (420)
T 1j1b_A          126 VYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDF  201 (420)
T ss_dssp             EEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCC
T ss_pred             eeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccc
Confidence            236799999975 777777655555678999999999999999999999   9999999999999999965 67899999


Q ss_pred             CCcccCCC-----CCcCCCcccCcccccCC-CCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhc
Q 047245          253 GLAKLMPG-----SLIATSAYSAPECFQNR-SYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAG  326 (380)
Q Consensus       253 gl~~~~~~-----~~~~~~~y~aPE~~~~~-~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~  326 (380)
                      |+++....     ...+|+.|+|||.+.+. .++.++|||||||++|||++|+.||......    ..+...+.....+ 
T Consensus       202 G~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~----~~l~~i~~~lg~p-  276 (420)
T 1j1b_A          202 GSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV----DQLVEIIKVLGTP-  276 (420)
T ss_dssp             TTCEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHHHCSC-
T ss_pred             hhhhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHHhCCC-
Confidence            99986532     24589999999998764 7899999999999999999999998642110    0111111111000 


Q ss_pred             chhH--hhch--------hccCCc----ccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          327 EARE--ALDR--------SILGEE----VEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       327 ~~~~--~~~~--------~~~~~~----~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      ....  ...+        .+....    ........+.+|+.+||+.||.+|||+.|+++
T Consensus       277 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~  336 (420)
T 1j1b_A          277 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  336 (420)
T ss_dssp             CHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence            0000  0000        000000    01122456889999999999999999999974


No 226
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00  E-value=6.7e-41  Score=308.99  Aligned_cols=240  Identities=22%  Similarity=0.311  Sum_probs=190.0

Q ss_pred             cccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCC--CCCcceeeEEEecCCeEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLR--HRNLMSLRAYVPESSRFYL  178 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~l  178 (380)
                      ..+.||+|+||.||++...+|+.||+|++....      ........+.+|+.++.+++  ||||+++++++.+.+..++
T Consensus        32 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l  105 (313)
T 3cek_A           32 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE------ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM  105 (313)
T ss_dssp             EEEEEECCSSEEEEEEECTTCCEEEEEEEECSS------CCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEE
T ss_pred             EEEEecCCCCEEEEEEEcCCCcEEEEEEecccc------ccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEE
Confidence            456899999999999999889999999997522      12344578899999999997  5999999999999999999


Q ss_pred             EEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccC
Q 047245          179 VYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLM  258 (380)
Q Consensus       179 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~  258 (380)
                      ||| +.+++|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+||++++ +.+||+|||+++..
T Consensus       106 v~e-~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~  176 (313)
T 3cek_A          106 VME-CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVD-GMLKLIDFGIANQM  176 (313)
T ss_dssp             EEC-CCSEEHHHHHHH----CSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEET-TEEEECCCSSSCC-
T ss_pred             EEe-cCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEEC-CeEEEeeccccccc
Confidence            999 568899999974    347899999999999999999999   889999999999999964 89999999999865


Q ss_pred             CC--------CCcCCCcccCcccccC-----------CCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHH
Q 047245          259 PG--------SLIATSAYSAPECFQN-----------RSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWL  319 (380)
Q Consensus       259 ~~--------~~~~~~~y~aPE~~~~-----------~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~  319 (380)
                      ..        ...+++.|+|||.+.+           ..++.++||||||+++|||++|..||....       ......
T Consensus       177 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-------~~~~~~  249 (313)
T 3cek_A          177 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-------NQISKL  249 (313)
T ss_dssp             -------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCC-------SHHHHH
T ss_pred             cCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHH-------HHHHHH
Confidence            42        2358999999999875           468889999999999999999999986311       111111


Q ss_pred             HHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          320 RHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      .         ..+++.... ..+......+.+++.+||+.||++|||+.|+++
T Consensus       250 ~---------~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  292 (313)
T 3cek_A          250 H---------AIIDPNHEI-EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  292 (313)
T ss_dssp             H---------HHHCTTSCC-CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             H---------HHHhccccc-CCcccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence            1         111111110 111112345789999999999999999999985


No 227
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00  E-value=1.8e-40  Score=313.43  Aligned_cols=248  Identities=24%  Similarity=0.367  Sum_probs=189.4

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeE---
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRF---  176 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---  176 (380)
                      ..+.||+|+||.||++.. .+|+.||+|++....      ......+.+.+|+.++++++||||+++++++...+..   
T Consensus        46 ~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~  119 (371)
T 4exu_A           46 SPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF------QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF  119 (371)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEECSTT------SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred             EEeEEecCCCeEEEEEEECCCCCEEEEEEecccc------cchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence            346799999999999986 468999999996521      2334557888999999999999999999999877654   


Q ss_pred             ---EEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccC
Q 047245          177 ---YLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFG  253 (380)
Q Consensus       177 ---~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfg  253 (380)
                         ++||||++ ++|.+++.      ..+++..+..++.|++.||+|||   +.+++||||||+|||++.++.+||+|||
T Consensus       120 ~~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg  189 (371)
T 4exu_A          120 YDFYLVMPFMQ-TDLQKIMG------MEFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFG  189 (371)
T ss_dssp             CCCEEEEECCC-EEHHHHTT------SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTT
T ss_pred             eeEEEEEcccc-ccHHHHhh------cCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecC
Confidence               99999997 68888764      24899999999999999999999   8899999999999999999999999999


Q ss_pred             CcccCCC---CCcCCCcccCcccccC-CCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHh-hcch
Q 047245          254 LAKLMPG---SLIATSAYSAPECFQN-RSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQH-AGEA  328 (380)
Q Consensus       254 l~~~~~~---~~~~~~~y~aPE~~~~-~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~-~~~~  328 (380)
                      +++....   ...+|+.|+|||.+.+ ..++.++||||||+++|||++|+.||...        ...+....... .+..
T Consensus       190 ~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~--------~~~~~~~~i~~~~~~~  261 (371)
T 4exu_A          190 LARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK--------DYLDQLTQILKVTGVP  261 (371)
T ss_dssp             CC--------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCS--------SHHHHHHHHHHHHCCC
T ss_pred             cccccccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC--------ChHHHHHHHHHHhCCC
Confidence            9986553   3458999999999987 77899999999999999999999999642        11111111110 0000


Q ss_pred             -hHh-----------hchhccCC---c---ccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          329 -REA-----------LDRSILGE---E---VEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       329 -~~~-----------~~~~~~~~---~---~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                       .+.           ....+...   .   ........+.+++.+||+.||++|||++|+++
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  323 (371)
T 4exu_A          262 GTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT  323 (371)
T ss_dssp             CHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             cHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence             000           00000000   0   00123456889999999999999999999975


No 228
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00  E-value=1.4e-41  Score=317.96  Aligned_cols=259  Identities=20%  Similarity=0.303  Sum_probs=196.6

Q ss_pred             cccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhh---------hcHHHHHHHHHHHHHHHcCCCCCcceeeEEEe
Q 047245          101 ENRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEK---------QNKSVKRRIQQELEVLASLRHRNLMSLRAYVP  171 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~---------~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~  171 (380)
                      ..+.||+|+||.||++.. +|+.||+|++..........         ......+.+.+|+.++++++||||+++++++.
T Consensus        35 ~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~  113 (348)
T 2pml_X           35 IIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIIT  113 (348)
T ss_dssp             EEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEE
T ss_pred             EEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEe
Confidence            456899999999999999 89999999997532111000         00112267889999999999999999999999


Q ss_pred             cCCeEEEEEeecCCCCHHHH------HHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCC-CCeEecCCCCCcEEeCCC
Q 047245          172 ESSRFYLVYDYLQTGSLEDA------MDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCN-PQILHYNLKPTNVMLDAE  244 (380)
Q Consensus       172 ~~~~~~lv~e~~~~gsL~~~------l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~-~~iiH~dlk~~Nill~~~  244 (380)
                      +.+..++||||+++|+|.++      +..  .....+++..++.++.|++.||+|||   + .+++||||+|+||+++.+
T Consensus       114 ~~~~~~lv~e~~~~~~L~~~~~~~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dl~p~Nil~~~~  188 (348)
T 2pml_X          114 NYDEVYIIYEYMENDSILKFDEYFFVLDK--NYTCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRDVKPSNILMDKN  188 (348)
T ss_dssp             SSSEEEEEEECCTTCBSSEESSSEESSCS--SSCCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCCCCGGGEEECTT
T ss_pred             eCCeEEEEEeccCCCcHHHHHHHhhhhhh--ccccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecCCChHhEEEcCC
Confidence            99999999999999999998      442  22467999999999999999999999   7 899999999999999999


Q ss_pred             CceEEeccCCcccCCC----CCcCCCcccCcccccCC-CCCC-cchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHH
Q 047245          245 FTPRLADFGLAKLMPG----SLIATSAYSAPECFQNR-SYTD-KSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRW  318 (380)
Q Consensus       245 ~~~kl~Dfgl~~~~~~----~~~~~~~y~aPE~~~~~-~~~~-~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~  318 (380)
                      +.+||+|||++.....    ...+++.|+|||.+.+. .++. ++||||||+++|||++|..||.....       ..+.
T Consensus       189 ~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~  261 (348)
T 2pml_X          189 GRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKIS-------LVEL  261 (348)
T ss_dssp             SCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSC-------SHHH
T ss_pred             CcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCc-------HHHH
Confidence            9999999999986543    34589999999999887 6666 99999999999999999999864211       0111


Q ss_pred             HHHHHhhcchhH-----hhchhcc--CCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          319 LRHLQHAGEARE-----ALDRSIL--GEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       319 ~~~~~~~~~~~~-----~~~~~~~--~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      ............     ...+...  ...........+.+++.+||+.||++|||++|+++
T Consensus       262 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~  322 (348)
T 2pml_X          262 FNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK  322 (348)
T ss_dssp             HHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            111111100000     0000000  00000224456889999999999999999999986


No 229
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00  E-value=1.3e-40  Score=307.37  Aligned_cols=247  Identities=22%  Similarity=0.373  Sum_probs=184.0

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEe--------
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVP--------  171 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--------  171 (380)
                      ..+.||+|+||.||++... +|+.||+|++...        .....+.+.+|+.++++++||||+++++++.        
T Consensus        15 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--------~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   86 (320)
T 2i6l_A           15 DLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT--------DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTD   86 (320)
T ss_dssp             EEEECC-----CEEEEEETTTTEEEEEEEEECC--------SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC
T ss_pred             EEEEeccCCCeEEEEEEECCCCeEEEEEEEecC--------ChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccc
Confidence            3467999999999999985 4899999998651        2344578889999999999999999999873        


Q ss_pred             ------cCCeEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeC-CC
Q 047245          172 ------ESSRFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLD-AE  244 (380)
Q Consensus       172 ------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~-~~  244 (380)
                            +....++||||++ |+|.+++.     ...+++..+..++.|++.||+|||   +.+++||||||+||+++ ++
T Consensus        87 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~  157 (320)
T 2i6l_A           87 DVGSLTELNSVYIVQEYME-TDLANVLE-----QGPLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTED  157 (320)
T ss_dssp             ----CCSCSEEEEEEECCS-EEHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTT
T ss_pred             ccccccccCceeEEeeccC-CCHHHHhh-----cCCccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCC
Confidence                  4468899999997 69999986     346899999999999999999999   89999999999999997 56


Q ss_pred             CceEEeccCCcccCCC---------CCcCCCcccCcccccC-CCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCC
Q 047245          245 FTPRLADFGLAKLMPG---------SLIATSAYSAPECFQN-RSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGS  314 (380)
Q Consensus       245 ~~~kl~Dfgl~~~~~~---------~~~~~~~y~aPE~~~~-~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~  314 (380)
                      +.+||+|||+++....         ...++..|+|||.+.+ ..++.++||||||+++|||++|+.||.....       
T Consensus       158 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-------  230 (320)
T 2i6l_A          158 LVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHE-------  230 (320)
T ss_dssp             TEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-------
T ss_pred             CeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCH-------
Confidence            7999999999986532         1236888999998865 6789999999999999999999999864211       


Q ss_pred             HHHHHHHHHhhc-------------chhHhhchhccCCc-----ccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          315 LGRWLRHLQHAG-------------EAREALDRSILGEE-----VEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       315 l~~~~~~~~~~~-------------~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                       .+.........             .....+........     ........+.+++.+||+.||++|||++|+++
T Consensus       231 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (320)
T 2i6l_A          231 -LEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS  305 (320)
T ss_dssp             -HHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             -HHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence             11111111100             00000000000000     00123456889999999999999999999975


No 230
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00  E-value=5.9e-41  Score=323.09  Aligned_cols=241  Identities=20%  Similarity=0.319  Sum_probs=182.0

Q ss_pred             ccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcC-CCCCcceeeEEEecCCeEEEEE
Q 047245          102 NRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASL-RHRNLMSLRAYVPESSRFYLVY  180 (380)
Q Consensus       102 ~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~  180 (380)
                      .++||+|+||+||.+...+|+.||||++...           ....+.+|+.++.++ +||||+++++++.+.+..++||
T Consensus        20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~-----------~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~   88 (434)
T 2rio_A           20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLID-----------FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIAL   88 (434)
T ss_dssp             EEEEEECSTTCEEEEEESSSSEEEEEEEEGG-----------GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEeeCCCeEEEEEEEECCeEEEEEEEcHH-----------HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEE
Confidence            4679999999998766678999999998641           124567899999886 8999999999999999999999


Q ss_pred             eecCCCCHHHHHHHhhhcccC---CCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCC-------------
Q 047245          181 DYLQTGSLEDAMDRIRENQLQ---LGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAE-------------  244 (380)
Q Consensus       181 e~~~~gsL~~~l~~~~~~~~~---l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~-------------  244 (380)
                      ||++ |+|.+++.........   .++..++.++.|++.||+|||   +.+++||||||+|||++.+             
T Consensus        89 E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~  164 (434)
T 2rio_A           89 ELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAEN  164 (434)
T ss_dssp             CCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCS
T ss_pred             ecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCc
Confidence            9995 6999999753221111   133346789999999999999   8999999999999999654             


Q ss_pred             CceEEeccCCcccCCC----------CCcCCCcccCcccccC-------CCCCCcchhhHHHHHHHHHHh-CCCCCCchh
Q 047245          245 FTPRLADFGLAKLMPG----------SLIATSAYSAPECFQN-------RSYTDKSDIFSFGMILAVLLT-GRDPTAPFF  306 (380)
Q Consensus       245 ~~~kl~Dfgl~~~~~~----------~~~~~~~y~aPE~~~~-------~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~  306 (380)
                      +.+||+|||+++....          ...||+.|+|||.+.+       ..++.++|||||||++|||++ |..||....
T Consensus       165 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~  244 (434)
T 2rio_A          165 LRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY  244 (434)
T ss_dssp             CEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTT
T ss_pred             eEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCch
Confidence            4899999999986543          2358999999999975       668999999999999999999 999986421


Q ss_pred             hhccCCCCHHHHHHHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          307 AEAASGGSLGRWLRHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       307 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      ...      ..    ....     ..................+.+++.+||+.||.+|||+.|+++
T Consensus       245 ~~~------~~----i~~~-----~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          245 SRE------SN----IIRG-----IFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             THH------HH----HHHT-----CCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             hhH------HH----HhcC-----CCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence            110      01    1100     000000011123456678899999999999999999999975


No 231
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00  E-value=8.6e-41  Score=318.06  Aligned_cols=251  Identities=22%  Similarity=0.320  Sum_probs=186.2

Q ss_pred             cccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCC------
Q 047245          101 ENRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESS------  174 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------  174 (380)
                      ..+.||+|+||.||++...++..+|+|++.....            ...+|+++++.++||||+++++++...+      
T Consensus        44 ~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~------------~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~  111 (394)
T 4e7w_A           44 NCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR------------FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEV  111 (394)
T ss_dssp             EEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT------------SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCE
T ss_pred             EeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc------------hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCce
Confidence            4578999999999999997777899999865211            1226999999999999999999985433      


Q ss_pred             eEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeC-CCCceEEeccC
Q 047245          175 RFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLD-AEFTPRLADFG  253 (380)
Q Consensus       175 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~-~~~~~kl~Dfg  253 (380)
                      ..++||||+++ ++.+.+.........+++..+..++.|++.||+|||   +.+++||||||+|||++ .++.+||+|||
T Consensus       112 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG  187 (394)
T 4e7w_A          112 FLNLVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFG  187 (394)
T ss_dssp             EEEEEEECCSE-EHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred             EEEEEeeccCc-cHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCC
Confidence            37899999987 554444433444567999999999999999999999   89999999999999999 78999999999


Q ss_pred             CcccCCC-----CCcCCCcccCcccccCC-CCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcc
Q 047245          254 LAKLMPG-----SLIATSAYSAPECFQNR-SYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGE  327 (380)
Q Consensus       254 l~~~~~~-----~~~~~~~y~aPE~~~~~-~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~  327 (380)
                      +++....     ...+|+.|+|||.+.+. .++.++|||||||++|||++|+.||......    ..+........ ...
T Consensus       188 ~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~----~~l~~i~~~~g-~p~  262 (394)
T 4e7w_A          188 SAKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI----DQLVEIIKVLG-TPS  262 (394)
T ss_dssp             TCEECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHHHC-CCC
T ss_pred             CcccccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHHhC-CCC
Confidence            9976532     34589999999998764 5899999999999999999999998642110    01111111100 000


Q ss_pred             hh--Hhhchh--------ccCCc----ccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          328 AR--EALDRS--------ILGEE----VEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       328 ~~--~~~~~~--------~~~~~----~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      ..  ....+.        .....    ........+.+++.+||+.||.+|||+.|+++
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  321 (394)
T 4e7w_A          263 REQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC  321 (394)
T ss_dssp             HHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence            00  000000        00000    01113456889999999999999999999985


No 232
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00  E-value=2e-40  Score=307.25  Aligned_cols=252  Identities=23%  Similarity=0.337  Sum_probs=189.8

Q ss_pred             cccccCccCCeeEEEEEe--cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcC---CCCCcceeeEEEe----
Q 047245          101 ENRLLGSSPDGKYYRTVL--DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASL---RHRNLMSLRAYVP----  171 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~--~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~----  171 (380)
                      ..+.||+|+||.||++..  .+|+.||+|++.........      ...+.+|+.+++.+   +||||+++++++.    
T Consensus        15 ~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~------~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~   88 (326)
T 1blx_A           15 CVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGM------PLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   88 (326)
T ss_dssp             EEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSC------BCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred             eeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccC------CchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence            456899999999999997  46889999999764322111      12345566666555   8999999999987    


Q ss_pred             -cCCeEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEe
Q 047245          172 -ESSRFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLA  250 (380)
Q Consensus       172 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~  250 (380)
                       .....++|+||++ |+|.+++...  ....+++..+..++.|++.||+|||   +.+++||||||+||+++.++.+||+
T Consensus        89 ~~~~~~~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl~  162 (326)
T 1blx_A           89 DRETKLTLVFEHVD-QDLTTYLDKV--PEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLA  162 (326)
T ss_dssp             SSEEEEEEEEECCS-CBHHHHHHHS--CTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEEC
T ss_pred             CCCceEEEEEecCC-CCHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEEe
Confidence             5567899999998 6999999752  2345899999999999999999999   8899999999999999999999999


Q ss_pred             ccCCcccCCC-----CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHh-
Q 047245          251 DFGLAKLMPG-----SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQH-  324 (380)
Q Consensus       251 Dfgl~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~-  324 (380)
                      |||+++....     ...+++.|+|||.+.+..++.++||||||+++|||++|+.||.....        .+....... 
T Consensus       163 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--------~~~~~~i~~~  234 (326)
T 1blx_A          163 DFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD--------VDQLGKILDV  234 (326)
T ss_dssp             SCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--------HHHHHHHHHH
T ss_pred             cCcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCH--------HHHHHHHHHH
Confidence            9999986542     34589999999999999999999999999999999999999864211        111111110 


Q ss_pred             --hcchhHh----------hchhcc--CCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          325 --AGEAREA----------LDRSIL--GEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       325 --~~~~~~~----------~~~~~~--~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                        ......+          +.....  ...........+.+++.+||+.||++|||+.|+++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  296 (326)
T 1blx_A          235 IGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  296 (326)
T ss_dssp             HCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             cCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence              0000000          000000  00011123456789999999999999999999984


No 233
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00  E-value=4.4e-40  Score=309.33  Aligned_cols=257  Identities=24%  Similarity=0.310  Sum_probs=179.7

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCe----
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSR----  175 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----  175 (380)
                      ..+.||+|+||.||++.. .+|..||||++......         ...+.+|++.++.++||||+++++++...+.    
T Consensus        27 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---------~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~   97 (360)
T 3e3p_A           27 VERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF---------RNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRR   97 (360)
T ss_dssp             EC----------CEEEEETTTCCEEEEEEEECCTTC---------CCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTT
T ss_pred             EEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc---------cHHHHHHHHHHHhcCCCCcccHHHhhhcccccccc
Confidence            567899999999999997 46899999998652211         1345678888899999999999999865333    


Q ss_pred             ---EEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCC-CCceEEec
Q 047245          176 ---FYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDA-EFTPRLAD  251 (380)
Q Consensus       176 ---~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~-~~~~kl~D  251 (380)
                         .++||||+++ +|.+.+.........+++..+..++.|++.||+|||. ++.+++||||||+|||++. ++.+||+|
T Consensus        98 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~~~ivH~Dlkp~NIll~~~~~~~kl~D  175 (360)
T 3e3p_A           98 DIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHL-PSVNVCHRDIKPHNVLVNEADGTLKLCD  175 (360)
T ss_dssp             CEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTS-TTTCCBCSCCCGGGEEEETTTTEEEECC
T ss_pred             ceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhC-CCCCeecCcCCHHHEEEeCCCCcEEEee
Confidence               7899999976 6666665444456678999999999999999999993 3678999999999999997 89999999


Q ss_pred             cCCcccCCC-----CCcCCCcccCcccccCC-CCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhh
Q 047245          252 FGLAKLMPG-----SLIATSAYSAPECFQNR-SYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHA  325 (380)
Q Consensus       252 fgl~~~~~~-----~~~~~~~y~aPE~~~~~-~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~  325 (380)
                      ||+++....     ...+|+.|+|||.+.+. .++.++||||||+++|||++|+.||......    ..+....+.....
T Consensus       176 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~----~~~~~~~~~~~~~  251 (360)
T 3e3p_A          176 FGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA----GQLHEIVRVLGCP  251 (360)
T ss_dssp             CTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHHHCCC
T ss_pred             CCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH----HHHHHHHHHcCCC
Confidence            999986543     23589999999998664 4899999999999999999999998642111    0111111110000


Q ss_pred             c-chhHhhchhcc--------C-------CcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          326 G-EAREALDRSIL--------G-------EEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       326 ~-~~~~~~~~~~~--------~-------~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      . .....+++...        .       ..........+.+++.+||+.||.+|||+.|+++
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  314 (360)
T 3e3p_A          252 SREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC  314 (360)
T ss_dssp             CHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence            0 00000000000        0       0011124567899999999999999999999974


No 234
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00  E-value=4e-40  Score=308.72  Aligned_cols=251  Identities=22%  Similarity=0.345  Sum_probs=190.2

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecC-----C
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPES-----S  174 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~  174 (380)
                      ..+.||+|+||.||++... +|+.||||++...       ........+.+|+.++++++||||+++++++...     .
T Consensus        15 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   87 (353)
T 2b9h_A           15 LKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF-------DKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFN   87 (353)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-------SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCC
T ss_pred             EeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc-------ccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccc
Confidence            4568999999999999974 6899999999641       1233456788999999999999999999998654     6


Q ss_pred             eEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCC
Q 047245          175 RFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGL  254 (380)
Q Consensus       175 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl  254 (380)
                      ..++|+||++ |+|.+++..     ..+++..+..++.|++.||+|||   +.+++||||||+||+++.++.+||+|||+
T Consensus        88 ~~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~  158 (353)
T 2b9h_A           88 EVYIIQELMQ-TDLHRVIST-----QMLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGL  158 (353)
T ss_dssp             CEEEEECCCS-EEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred             eEEEEEeccC-ccHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEeccc
Confidence            7899999997 599998873     46899999999999999999999   88999999999999999999999999999


Q ss_pred             cccCCC----------------CCcCCCcccCcccccC-CCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHH
Q 047245          255 AKLMPG----------------SLIATSAYSAPECFQN-RSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGR  317 (380)
Q Consensus       255 ~~~~~~----------------~~~~~~~y~aPE~~~~-~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~  317 (380)
                      ++....                ...||+.|+|||.+.+ ..++.++||||||+++|||++|+.||.......    .+..
T Consensus       159 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~  234 (353)
T 2b9h_A          159 ARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH----QLLL  234 (353)
T ss_dssp             CEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHH
T ss_pred             ccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHH----HHHH
Confidence            976532                1247889999998764 778999999999999999999999986421000    0000


Q ss_pred             HHHHHHhhc------------chhHhhchhcc--CC---cccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          318 WLRHLQHAG------------EAREALDRSIL--GE---EVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       318 ~~~~~~~~~------------~~~~~~~~~~~--~~---~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                       +.......            ...+.+.....  ..   .........+.+++.+||+.||++|||++|+++
T Consensus       235 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (353)
T 2b9h_A          235 -IFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE  305 (353)
T ss_dssp             -HHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             -HHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence             00000000            00000000000  00   000123456789999999999999999999985


No 235
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00  E-value=1.1e-40  Score=309.52  Aligned_cols=247  Identities=21%  Similarity=0.343  Sum_probs=174.1

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHH-HHHcCCCCCcceeeEEEecCCeEEE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELE-VLASLRHRNLMSLRAYVPESSRFYL  178 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~l  178 (380)
                      ..+.||+|+||.||++.. .+|+.||+|++....       .......+..|+. +++.++||||+++++++.+.+..++
T Consensus        26 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~l   98 (327)
T 3aln_A           26 DLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV-------DEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWI   98 (327)
T ss_dssp             C-CEEEECSSEEEEEEEETTTTEEEEEEEEECCC-------CHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEE
T ss_pred             ehheeccCCCEEEEEEEEcCCCCEEEEEEeeccc-------CchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEE
Confidence            346799999999999997 478999999997521       1223345556665 7777899999999999999999999


Q ss_pred             EEeecCCCCHHHHHHHhhh-cccCCCHHHHHHHHHHHHHHHHHhHhcCCC-CeEecCCCCCcEEeCCCCceEEeccCCcc
Q 047245          179 VYDYLQTGSLEDAMDRIRE-NQLQLGWEVRLRIAVGVIKGLQYLHFTCNP-QILHYNLKPTNVMLDAEFTPRLADFGLAK  256 (380)
Q Consensus       179 v~e~~~~gsL~~~l~~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~-~iiH~dlk~~Nill~~~~~~kl~Dfgl~~  256 (380)
                      ||||+++ +|.+++..... ....+++..+..++.|++.||+|||   +. +++||||||+||+++.++.+||+|||+++
T Consensus        99 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~  174 (327)
T 3aln_A           99 CMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGISG  174 (327)
T ss_dssp             EECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSSSC
T ss_pred             EEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCCce
Confidence            9999985 88888864322 2457899999999999999999999   77 99999999999999999999999999998


Q ss_pred             cCCCC-----CcCCCcccCcccc----cCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcc
Q 047245          257 LMPGS-----LIATSAYSAPECF----QNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGE  327 (380)
Q Consensus       257 ~~~~~-----~~~~~~y~aPE~~----~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~  327 (380)
                      .....     ..+++.|+|||.+    .+..++.++||||||+++|||++|..||........       ..      ..
T Consensus       175 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-------~~------~~  241 (327)
T 3aln_A          175 QLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD-------QL------TQ  241 (327)
T ss_dssp             C------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------------------CC
T ss_pred             ecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH-------HH------HH
Confidence            65432     2588999999998    456789999999999999999999999864211000       00      00


Q ss_pred             hhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          328 AREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      ......+.+. ..........+.+++.+||+.||++|||+.|+++
T Consensus       242 ~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          242 VVKGDPPQLS-NSEEREFSPSFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             CCCSCCCCCC-CCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HhcCCCCCCC-CcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence            0000000110 0011123456889999999999999999999874


No 236
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00  E-value=1.3e-40  Score=314.25  Aligned_cols=256  Identities=20%  Similarity=0.250  Sum_probs=192.9

Q ss_pred             ccccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCC-----------CCCcceee
Q 047245          100 NENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLR-----------HRNLMSLR  167 (380)
Q Consensus       100 ~~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~  167 (380)
                      ...+.||+|+||.||++.. .+|+.||+|++..         .......+.+|+.++++++           ||||++++
T Consensus        22 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---------~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~   92 (373)
T 1q8y_A           22 ILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG---------DKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLL   92 (373)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTTEEEEEEEECS---------CHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCC
T ss_pred             EEEEeeeecCCeEEEEEEecCCCcEEEEEEecC---------CccchhhhhHHHHHHHHhhcccccchhccccchHHHHH
Confidence            3557899999999999996 5789999999864         2233467788999998886           89999999


Q ss_pred             EEEecCC----eEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCC-CeEecCCCCCcEEeC
Q 047245          168 AYVPESS----RFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNP-QILHYNLKPTNVMLD  242 (380)
Q Consensus       168 ~~~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~-~iiH~dlk~~Nill~  242 (380)
                      +++...+    ..++||||+ +++|.+++....  ...+++..+..++.|++.||+|||   +. +++||||||+|||++
T Consensus        93 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~  166 (373)
T 1q8y_A           93 DHFNHKGPNGVHVVMVFEVL-GENLLALIKKYE--HRGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLME  166 (373)
T ss_dssp             EEEEEEETTEEEEEEEECCC-CEEHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEE
T ss_pred             HHhhccCCCCceEEEEEecC-CCCHHHHHHHhh--ccCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHeEEe
Confidence            9987543    789999999 889999997532  345899999999999999999999   77 999999999999994


Q ss_pred             ------CCCceEEeccCCcccCCC---CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCC
Q 047245          243 ------AEFTPRLADFGLAKLMPG---SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGG  313 (380)
Q Consensus       243 ------~~~~~kl~Dfgl~~~~~~---~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~  313 (380)
                            ..+.+||+|||+++....   ...+|+.|+|||.+.+..++.++||||||+++|||++|..||.........  
T Consensus       167 ~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~--  244 (373)
T 1q8y_A          167 IVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYT--  244 (373)
T ss_dssp             EEETTTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC-----------
T ss_pred             ccCCCcCcceEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccC--
Confidence                  445899999999976543   346899999999999999999999999999999999999999742111000  


Q ss_pred             CHHHHHHHHH-hhcchh-----------Hhhch------------------hccCCcccHHHHHHHHHHHHHcccCCCCC
Q 047245          314 SLGRWLRHLQ-HAGEAR-----------EALDR------------------SILGEEVEEDEMLMAVRIAVVCLSDSPAD  363 (380)
Q Consensus       314 ~l~~~~~~~~-~~~~~~-----------~~~~~------------------~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~  363 (380)
                      ...+...... ..+...           ..+..                  .......+......+.+++.+||+.||++
T Consensus       245 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  324 (373)
T 1q8y_A          245 KDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRK  324 (373)
T ss_dssp             CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTT
T ss_pred             ChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccc
Confidence            0000010000 000000           00000                  00011234567788999999999999999


Q ss_pred             CCCHHhHHH
Q 047245          364 RPSSDELVP  372 (380)
Q Consensus       364 RPs~~evl~  372 (380)
                      |||++|+++
T Consensus       325 Rpt~~ell~  333 (373)
T 1q8y_A          325 RADAGGLVN  333 (373)
T ss_dssp             CBCHHHHHT
T ss_pred             cCCHHHHhh
Confidence            999999985


No 237
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00  E-value=9.8e-41  Score=311.08  Aligned_cols=242  Identities=19%  Similarity=0.288  Sum_probs=167.1

Q ss_pred             ccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEec----CCeE
Q 047245          102 NRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPE----SSRF  176 (380)
Q Consensus       102 ~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~  176 (380)
                      .++||+|+||.||++... +|+.||+|++...         .   ....+....++.++||||+++++++..    ....
T Consensus        34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---------~---~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~  101 (336)
T 3fhr_A           34 KQVLGLGVNGKVLECFHRRTGQKCALKLLYDS---------P---KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL  101 (336)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEESS---------H---HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             ceeeeeCCCeEEEEEEECCCCCEEEEEEecCc---------H---HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence            457999999999999975 6899999998641         1   111222334566799999999999865    4558


Q ss_pred             EEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCC---CCceEEeccC
Q 047245          177 YLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDA---EFTPRLADFG  253 (380)
Q Consensus       177 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~---~~~~kl~Dfg  253 (380)
                      ++||||+++|+|.+++..  .....+++..++.++.|++.||+|||   +.+++||||||+||+++.   ++.+||+|||
T Consensus       102 ~lv~e~~~gg~L~~~l~~--~~~~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg  176 (336)
T 3fhr_A          102 LIIMECMEGGELFSRIQE--RGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFG  176 (336)
T ss_dssp             EEEEECCTTEEHHHHHHT--C-CCCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCT
T ss_pred             EEEEeccCCCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEeccc
Confidence            999999999999999974  22346999999999999999999999   889999999999999976   4559999999


Q ss_pred             CcccCCC----CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchh
Q 047245          254 LAKLMPG----SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAR  329 (380)
Q Consensus       254 l~~~~~~----~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~  329 (380)
                      +++....    ...+|+.|+|||.+.+..++.++||||||+++|||++|..||.........    ........ .+   
T Consensus       177 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~----~~~~~~~~-~~---  248 (336)
T 3fhr_A          177 FAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAIS----PGMKRRIR-LG---  248 (336)
T ss_dssp             TCEEC----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------------
T ss_pred             cceeccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhh----hhHHHhhh-cc---
Confidence            9976543    235799999999998888999999999999999999999998642111100    00000000 00   


Q ss_pred             HhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          330 EALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                         ..... ..........+.+++.+||+.||.+|||++|+++
T Consensus       249 ---~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  287 (336)
T 3fhr_A          249 ---QYGFP-NPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN  287 (336)
T ss_dssp             -----CCC-TTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             ---ccccC-chhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence               00000 0111223456889999999999999999999986


No 238
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00  E-value=5.8e-40  Score=311.22  Aligned_cols=191  Identities=22%  Similarity=0.334  Sum_probs=163.2

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCC-CC-----CcceeeEEEecC
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLR-HR-----NLMSLRAYVPES  173 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~~~  173 (380)
                      ..+.||+|+||.||+|... +|+.||||++..         .......+..|+.+++.++ |+     +|+++.+++...
T Consensus        58 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~---------~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  128 (382)
T 2vx3_A           58 IDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKN---------KKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR  128 (382)
T ss_dssp             EEEEEEEETTEEEEEEEETTTTEEEEEEEECS---------SHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred             EEEEEeecCCEEEEEEEEcCCCcEEEEEEEec---------cHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence            4568999999999999864 688999999964         1233466778888888884 55     499999999999


Q ss_pred             CeEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeC--CCCceEEec
Q 047245          174 SRFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLD--AEFTPRLAD  251 (380)
Q Consensus       174 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~--~~~~~kl~D  251 (380)
                      +..++||||++ |+|.+++...  ....+++..+..++.|++.||+|||.. ..+|+||||||+|||++  .++.+||+|
T Consensus       129 ~~~~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~D  204 (382)
T 2vx3_A          129 NHLCLVFEMLS-YNLYDLLRNT--NFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVD  204 (382)
T ss_dssp             TEEEEEEECCC-CBHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECC
T ss_pred             CceEEEEecCC-CCHHHHHhhc--CcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEe
Confidence            99999999996 5999999752  234689999999999999999999931 46899999999999995  478899999


Q ss_pred             cCCcccCCC---CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCc
Q 047245          252 FGLAKLMPG---SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAP  304 (380)
Q Consensus       252 fgl~~~~~~---~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~  304 (380)
                      ||+++....   ...+|+.|+|||.+.+..++.++|||||||++|||++|+.||..
T Consensus       205 FG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~  260 (382)
T 2vx3_A          205 FGSSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG  260 (382)
T ss_dssp             CTTCEETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ccCceecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            999987653   34689999999999999999999999999999999999999964


No 239
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00  E-value=1.5e-39  Score=304.57  Aligned_cols=252  Identities=18%  Similarity=0.229  Sum_probs=191.9

Q ss_pred             cccccCccCCeeEEEEEec-CC-cEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCC------cceeeEEEec
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NG-LTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRN------LMSLRAYVPE  172 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g-~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~  172 (380)
                      ..+.||+|+||.||++... ++ ..||+|++..         .....+.+.+|+.++++++|+|      ++.+.+++..
T Consensus        23 ~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~---------~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~   93 (355)
T 2eu9_A           23 IVGNLGEGTFGKVVECLDHARGKSQVALKIIRN---------VGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF   93 (355)
T ss_dssp             EEEEEEEETTEEEEEEEETTTTTEEEEEEEECS---------CHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE
T ss_pred             EEEEeeccCCeEEEEEEecCCCceEEEEEEEcc---------cccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee
Confidence            4568999999999999873 34 7899999864         1233467888999999987665      8999999999


Q ss_pred             CCeEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEe-----------
Q 047245          173 SSRFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVML-----------  241 (380)
Q Consensus       173 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill-----------  241 (380)
                      .+..++||||+ +++|.+++..  .....+++..+..++.|++.||+|||   +.+++||||||+|||+           
T Consensus        94 ~~~~~lv~e~~-~~~l~~~l~~--~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~  167 (355)
T 2eu9_A           94 HGHMCIAFELL-GKNTFEFLKE--NNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNE  167 (355)
T ss_dssp             TTEEEEEEECC-CCBHHHHHHH--TTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECC
T ss_pred             CCeEEEEEecc-CCChHHHHHh--ccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecccccccccc
Confidence            99999999999 6788888764  22346899999999999999999999   9999999999999999           


Q ss_pred             --------CCCCceEEeccCCcccCCC---CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhcc
Q 047245          242 --------DAEFTPRLADFGLAKLMPG---SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAA  310 (380)
Q Consensus       242 --------~~~~~~kl~Dfgl~~~~~~---~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~  310 (380)
                              +.++.+||+|||+++....   ...+|+.|+|||.+.+..++.++||||||+++|||++|..||....... 
T Consensus       168 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-  246 (355)
T 2eu9_A          168 HKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE-  246 (355)
T ss_dssp             C-CCCEEEESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-
T ss_pred             cccccccccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH-
Confidence                    5678999999999986543   3468999999999999999999999999999999999999996421110 


Q ss_pred             CCCCHHHHHHHHHhhc--------c---------------------hhHhhchhccCCcccHHHHHHHHHHHHHcccCCC
Q 047245          311 SGGSLGRWLRHLQHAG--------E---------------------AREALDRSILGEEVEEDEMLMAVRIAVVCLSDSP  361 (380)
Q Consensus       311 ~~~~l~~~~~~~~~~~--------~---------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P  361 (380)
                          ....+.......        .                     ..+...+..........+...+.+++.+||+.||
T Consensus       247 ----~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP  322 (355)
T 2eu9_A          247 ----HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDP  322 (355)
T ss_dssp             ----HHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSST
T ss_pred             ----HHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCCh
Confidence                000111100000        0                     0000000000001122346678999999999999


Q ss_pred             CCCCCHHhHHH
Q 047245          362 ADRPSSDELVP  372 (380)
Q Consensus       362 ~~RPs~~evl~  372 (380)
                      ++|||+.|+++
T Consensus       323 ~~Rpt~~e~l~  333 (355)
T 2eu9_A          323 AQRITLAEALL  333 (355)
T ss_dssp             TTSCCHHHHTT
T ss_pred             hhCcCHHHHhc
Confidence            99999999973


No 240
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00  E-value=3.9e-40  Score=309.08  Aligned_cols=248  Identities=24%  Similarity=0.363  Sum_probs=189.4

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCe----
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSR----  175 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----  175 (380)
                      ..+.||+|+||.||++.. .+|+.||||++....      ......+.+.+|+.++++++||||+++++++...+.    
T Consensus        28 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  101 (353)
T 3coi_A           28 SPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF------QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF  101 (353)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEESSTT------SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred             EeeeEecCCCeEEEEEEECCCCCEEEEEEecccc------cchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccc
Confidence            346799999999999997 468999999986521      233445788899999999999999999999987653    


Q ss_pred             --EEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccC
Q 047245          176 --FYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFG  253 (380)
Q Consensus       176 --~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfg  253 (380)
                        .++||||++ |+|.+++.      ..+++..+..++.|++.||+|||   +.+++||||||+||+++.++.+||+|||
T Consensus       102 ~~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg  171 (353)
T 3coi_A          102 YDFYLVMPFMQ-TDLQKIMG------LKFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFG  171 (353)
T ss_dssp             CCCEEEEECCS-EEGGGTTT------SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTT
T ss_pred             eeEEEEecccc-CCHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeecc
Confidence              499999997 58877664      24899999999999999999999   8899999999999999999999999999


Q ss_pred             CcccCCC---CCcCCCcccCcccccC-CCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHh-hcch
Q 047245          254 LAKLMPG---SLIATSAYSAPECFQN-RSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQH-AGEA  328 (380)
Q Consensus       254 l~~~~~~---~~~~~~~y~aPE~~~~-~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~-~~~~  328 (380)
                      +++....   ...+++.|+|||.+.+ ..++.++||||||+++|||++|..||...        ...+....... .+..
T Consensus       172 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~--------~~~~~~~~i~~~~~~~  243 (353)
T 3coi_A          172 LARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK--------DYLDQLTQILKVTGVP  243 (353)
T ss_dssp             CTTC--------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSS--------CHHHHHHHHHHHHCBC
T ss_pred             cccCCCCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCC--------CHHHHHHHHHHHhCCC
Confidence            9986543   2358999999999877 67899999999999999999999998642        11111111110 0000


Q ss_pred             -h------------Hhhch---hcc--CCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          329 -R------------EALDR---SIL--GEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       329 -~------------~~~~~---~~~--~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                       .            ..+..   ...  -..........+.+++.+||+.||++|||++|+++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  305 (353)
T 3coi_A          244 GTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT  305 (353)
T ss_dssp             CHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             CHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence             0            00000   000  00111234566889999999999999999999974


No 241
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00  E-value=3.7e-40  Score=304.35  Aligned_cols=243  Identities=21%  Similarity=0.298  Sum_probs=174.6

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++... +|+.||+|++....      ......+.+.++..+++.++||||+++++++.+.+..++|
T Consensus        29 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv  102 (318)
T 2dyl_A           29 NLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSG------NKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIA  102 (318)
T ss_dssp             EEEEC------CEEEEEETTTCCEEEEEEEETTS------CHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceeeecCCeeEEEEEEecCCeEEEEEEecccc------cchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEE
Confidence            3467999999999999974 78999999997521      1222334455566678888999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCC-CeEecCCCCCcEEeCCCCceEEeccCCcccC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNP-QILHYNLKPTNVMLDAEFTPRLADFGLAKLM  258 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~-~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~  258 (380)
                      |||+ ++.+..+...   ....+++..+..++.|++.||+|||   +. +++||||||+||+++.++.+||+|||++...
T Consensus       103 ~e~~-~~~~~~l~~~---~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~  175 (318)
T 2dyl_A          103 MELM-GTCAEKLKKR---MQGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRL  175 (318)
T ss_dssp             ECCC-SEEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCCTTC---
T ss_pred             Eecc-CCcHHHHHHH---hccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEECCCchhc
Confidence            9999 4455555442   2457899999999999999999999   74 9999999999999999999999999999765


Q ss_pred             CC-----CCcCCCcccCccccc-----CCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcch
Q 047245          259 PG-----SLIATSAYSAPECFQ-----NRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEA  328 (380)
Q Consensus       259 ~~-----~~~~~~~y~aPE~~~-----~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~  328 (380)
                      ..     ...+++.|+|||.+.     ...++.++||||||+++|||++|..||...       ..............  
T Consensus       176 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~-------~~~~~~~~~~~~~~--  246 (318)
T 2dyl_A          176 VDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNC-------KTDFEVLTKVLQEE--  246 (318)
T ss_dssp             -----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTC-------CSHHHHHHHHHHSC--
T ss_pred             cCCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCC-------CccHHHHHHHhccC--
Confidence            43     235899999999994     456889999999999999999999998631       11111122211111  


Q ss_pred             hHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          329 REALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                          .+....   .......+.+++.+||+.||.+|||++|+++
T Consensus       247 ----~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          247 ----PPLLPG---HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE  283 (318)
T ss_dssp             ----CCCCCS---SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             ----CCCCCc---cCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence                000100   0113345789999999999999999999875


No 242
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00  E-value=1.6e-40  Score=307.59  Aligned_cols=237  Identities=22%  Similarity=0.342  Sum_probs=191.2

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCC--CCCcceeeEEEecCCeEE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLR--HRNLMSLRAYVPESSRFY  177 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~  177 (380)
                      ..+.||+|+||.||+|.. .+|+.||+|.+..........  ......+.+|+.++++++  |+||+++++++.+.+..+
T Consensus        47 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~  124 (320)
T 3a99_A           47 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE--LPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFV  124 (320)
T ss_dssp             EEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEE--CTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEE
T ss_pred             EEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhh--hhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEE
Confidence            457899999999999985 578999999997643221100  011244667999999996  599999999999999999


Q ss_pred             EEEeecCC-CCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeC-CCCceEEeccCCc
Q 047245          178 LVYDYLQT-GSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLD-AEFTPRLADFGLA  255 (380)
Q Consensus       178 lv~e~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~-~~~~~kl~Dfgl~  255 (380)
                      +|+|++.+ ++|.+++..    ...+++..+..++.|++.||+|||   +.+++||||||+|||++ +++.+||+|||++
T Consensus       125 lv~e~~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~  197 (320)
T 3a99_A          125 LILERPEPVQDLFDFITE----RGALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSG  197 (320)
T ss_dssp             EEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred             EEEEcCCCCccHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCCCCCEEEeeCccc
Confidence            99999986 899999974    346899999999999999999999   89999999999999999 7899999999999


Q ss_pred             ccCCC----CCcCCCcccCcccccCCCC-CCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhH
Q 047245          256 KLMPG----SLIATSAYSAPECFQNRSY-TDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEARE  330 (380)
Q Consensus       256 ~~~~~----~~~~~~~y~aPE~~~~~~~-~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  330 (380)
                      +....    ...+++.|+|||.+.+..+ +.++||||||+++|||++|+.||.....              ... +    
T Consensus       198 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--------------~~~-~----  258 (320)
T 3a99_A          198 ALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--------------IIR-G----  258 (320)
T ss_dssp             EECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--------------HHH-C----
T ss_pred             cccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh--------------hhc-c----
Confidence            86653    2358999999999987665 6789999999999999999999864100              000 0    


Q ss_pred             hhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          331 ALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                         ......    .....+.+++.+||+.||++|||++|+++
T Consensus       259 ---~~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~~ll~  293 (320)
T 3a99_A          259 ---QVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQN  293 (320)
T ss_dssp             ---CCCCSS----CCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ---cccccc----cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence               000111    12345789999999999999999999986


No 243
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00  E-value=5.5e-40  Score=315.73  Aligned_cols=237  Identities=21%  Similarity=0.314  Sum_probs=179.3

Q ss_pred             cccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcC-CCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASL-RHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..++||+|+||+|+.....+|+.||||++.....           ..+.+|+++++++ +||||+++++++.+....++|
T Consensus        28 ~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~-----------~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv   96 (432)
T 3p23_A           28 PKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF-----------SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIA   96 (432)
T ss_dssp             EEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE-----------EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEE
T ss_pred             cCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH-----------HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEE
Confidence            4578999999996655556799999999864110           2245799999999 899999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCC-----CCceEEeccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDA-----EFTPRLADFGL  254 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~-----~~~~kl~Dfgl  254 (380)
                      |||++ |+|.+++...   .....+..++.++.|++.||+|||   +.+|+||||||+|||++.     ...+||+|||+
T Consensus        97 ~E~~~-g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~  169 (432)
T 3p23_A           97 IELCA-ATLQEYVEQK---DFAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGL  169 (432)
T ss_dssp             EECCS-EEHHHHHHSS---SCCCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTE
T ss_pred             EECCC-CCHHHHHHhc---CCCccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccc
Confidence            99996 5999999742   233444556789999999999999   889999999999999953     34688999999


Q ss_pred             cccCCC---------CCcCCCcccCccccc---CCCCCCcchhhHHHHHHHHHHh-CCCCCCchhhhccCCCCHHHHHHH
Q 047245          255 AKLMPG---------SLIATSAYSAPECFQ---NRSYTDKSDIFSFGMILAVLLT-GRDPTAPFFAEAASGGSLGRWLRH  321 (380)
Q Consensus       255 ~~~~~~---------~~~~~~~y~aPE~~~---~~~~~~~sDv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~l~~~~~~  321 (380)
                      ++....         ...||+.|+|||.+.   ...++.++|||||||++|||++ |..||.....         .....
T Consensus       170 a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~---------~~~~~  240 (432)
T 3p23_A          170 CKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ---------RQANI  240 (432)
T ss_dssp             EECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT---------HHHHH
T ss_pred             eeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH---------HHHHH
Confidence            976542         235899999999997   4567889999999999999999 8888853110         01111


Q ss_pred             HHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          322 LQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      ...... ...       ..........+.+++.+||+.||.+|||++|+++
T Consensus       241 ~~~~~~-~~~-------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          241 LLGACS-LDC-------LHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             HTTCCC-CTT-------SCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HhccCC-ccc-------cCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence            110000 000       1111234555789999999999999999999983


No 244
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00  E-value=2.4e-40  Score=305.07  Aligned_cols=238  Identities=21%  Similarity=0.299  Sum_probs=186.0

Q ss_pred             ccccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcC----CCCCcceeeEEEecCC
Q 047245          100 NENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASL----RHRNLMSLRAYVPESS  174 (380)
Q Consensus       100 ~~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l----~h~niv~l~~~~~~~~  174 (380)
                      ...+.||+|+||.||++.. .+|+.||+|++........  ........+.+|+.++.++    +||||+++++++.+.+
T Consensus        34 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~  111 (312)
T 2iwi_A           34 RLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGW--SPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQE  111 (312)
T ss_dssp             EEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC----------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC----
T ss_pred             EEeeEEEcCCCEEEEEEEEccCCeEEEEEEEeccccccc--ccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCC
Confidence            3567899999999999986 5788999999965322110  0111234566789999888    8999999999999999


Q ss_pred             eEEEEEee-cCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeC-CCCceEEecc
Q 047245          175 RFYLVYDY-LQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLD-AEFTPRLADF  252 (380)
Q Consensus       175 ~~~lv~e~-~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~-~~~~~kl~Df  252 (380)
                      ..++|+|| +++++|.+++..    ...+++..++.++.|++.||+|||   +.+++||||||+||+++ .++.+||+||
T Consensus       112 ~~~~v~e~~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~df  184 (312)
T 2iwi_A          112 GFMLVLERPLPAQDLFDYITE----KGPLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAKLIDF  184 (312)
T ss_dssp             -CEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEETTTTEEEECCC
T ss_pred             eEEEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeCCCCeEEEEEc
Confidence            99999999 789999999975    346899999999999999999999   88999999999999999 8899999999


Q ss_pred             CCcccCCC----CCcCCCcccCcccccCCCCC-CcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcc
Q 047245          253 GLAKLMPG----SLIATSAYSAPECFQNRSYT-DKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGE  327 (380)
Q Consensus       253 gl~~~~~~----~~~~~~~y~aPE~~~~~~~~-~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~  327 (380)
                      |++.....    ...++..|+|||.+.+..+. .++||||||+++|||++|+.||....          .          
T Consensus       185 g~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~----------~----------  244 (312)
T 2iwi_A          185 GSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ----------E----------  244 (312)
T ss_dssp             SSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----------H----------
T ss_pred             chhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH----------H----------
Confidence            99886543    23588999999999876664 58999999999999999999986410          0          


Q ss_pred             hhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          328 AREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                         ......   ..+......+.+++.+||+.||++|||++|+++
T Consensus       245 ---~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~  283 (312)
T 2iwi_A          245 ---ILEAEL---HFPAHVSPDCCALIRRCLAPKPSSRPSLEEILL  283 (312)
T ss_dssp             ---HHHTCC---CCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             ---Hhhhcc---CCcccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence               000000   011223445789999999999999999999986


No 245
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00  E-value=6.8e-40  Score=325.93  Aligned_cols=253  Identities=22%  Similarity=0.309  Sum_probs=192.4

Q ss_pred             ccccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEec------
Q 047245          100 NENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPE------  172 (380)
Q Consensus       100 ~~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------  172 (380)
                      ...+.||+|+||.||++.. .+|+.||+|++...       ......+.+.+|+.++++++||||+++++++..      
T Consensus        17 ~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~-------~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~   89 (676)
T 3qa8_A           17 EMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE-------LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAP   89 (676)
T ss_dssp             CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC-------CCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCT
T ss_pred             EEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc-------CCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccC
Confidence            3567899999999999987 56899999998641       123445788999999999999999999999765      


Q ss_pred             CCeEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCc---eEE
Q 047245          173 SSRFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFT---PRL  249 (380)
Q Consensus       173 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~---~kl  249 (380)
                      ++..++||||+++|+|.+++.... ....+++..++.++.|++.||+|||   +.+++||||||+||+++.++.   +||
T Consensus        90 ~~~~~LVmEy~~ggsL~~~L~~~~-~~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL  165 (676)
T 3qa8_A           90 NDLPLLAMEYCEGGDLRKYLNQFE-NCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKI  165 (676)
T ss_dssp             TSSCCCEEECCSSCBHHHHHHSSS-CTTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEE
T ss_pred             CCeEEEEEEeCCCCCHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEE
Confidence            677899999999999999997422 2335888999999999999999999   899999999999999987664   999


Q ss_pred             eccCCcccCCC-----CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHh
Q 047245          250 ADFGLAKLMPG-----SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQH  324 (380)
Q Consensus       250 ~Dfgl~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~  324 (380)
                      +|||++.....     ...+++.|+|||.+.+..++.++||||||+++|||++|..||......       ..|......
T Consensus       166 ~DFG~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~-------~~~~~~i~~  238 (676)
T 3qa8_A          166 IDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP-------VQWHGKVRE  238 (676)
T ss_dssp             CSCCCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH-------HHSSTTCC-
T ss_pred             cccccccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch-------hhhhhhhhc
Confidence            99999987543     235899999999999999999999999999999999999999642111       111100000


Q ss_pred             hcchhHhhc----------hhc-cCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhH
Q 047245          325 AGEAREALD----------RSI-LGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDEL  370 (380)
Q Consensus       325 ~~~~~~~~~----------~~~-~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~ev  370 (380)
                      .........          ... ............+.+++..||+.||++|||+.|+
T Consensus       239 ~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el  295 (676)
T 3qa8_A          239 KSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN  295 (676)
T ss_dssp             -----CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred             ccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence            000000000          000 0111233466778999999999999999999873


No 246
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00  E-value=4.2e-39  Score=326.91  Aligned_cols=232  Identities=21%  Similarity=0.318  Sum_probs=185.7

Q ss_pred             cccccCccCCeeEEEEEec--CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCe---
Q 047245          101 ENRLLGSSPDGKYYRTVLD--NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSR---  175 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~--~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---  175 (380)
                      ..+.||+|+||.||++...  +|+.||||++...       ........+.+|+.++++++||||+++++++...+.   
T Consensus        84 i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~-------~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~  156 (681)
T 2pzi_A           84 VKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS-------GDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGD  156 (681)
T ss_dssp             EEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSS-------CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSC
T ss_pred             EEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCcc-------CCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCC
Confidence            4568999999999999975  6899999988641       123445778999999999999999999999987654   


Q ss_pred             --EEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccC
Q 047245          176 --FYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFG  253 (380)
Q Consensus       176 --~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfg  253 (380)
                        .++||||+++++|.+++..      .+++..++.++.|++.||+|||   +.+|+||||||+|||++.+ .+||+|||
T Consensus       157 ~~~~lv~E~~~g~~L~~~~~~------~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG  226 (681)
T 2pzi_A          157 PVGYIVMEYVGGQSLKRSKGQ------KLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLG  226 (681)
T ss_dssp             EEEEEEEECCCCEECC----C------CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCT
T ss_pred             ceeEEEEEeCCCCcHHHHHhC------CCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEecc
Confidence              7999999999999987642      6999999999999999999999   8999999999999999986 89999999


Q ss_pred             CcccCCC--CCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHh
Q 047245          254 LAKLMPG--SLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREA  331 (380)
Q Consensus       254 l~~~~~~--~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  331 (380)
                      +++....  ...||+.|+|||.+.+.. +.++||||||+++|||++|..|+.......                      
T Consensus       227 ~a~~~~~~~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~----------------------  283 (681)
T 2pzi_A          227 AVSRINSFGYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDG----------------------  283 (681)
T ss_dssp             TCEETTCCSCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSS----------------------
T ss_pred             cchhcccCCccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccccc----------------------
Confidence            9987653  345899999999987654 889999999999999999988865311000                      


Q ss_pred             hchhccCCcccHHHHHHHHHHHHHcccCCCCCCCC-HHhHHHHHhc
Q 047245          332 LDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPS-SDELVPMLTQ  376 (380)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs-~~evl~~L~~  376 (380)
                          +............+.+++.+||+.||++||+ ++++.+.|..
T Consensus       284 ----~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~  325 (681)
T 2pzi_A          284 ----LPEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG  325 (681)
T ss_dssp             ----CCTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             ----ccccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence                0001111223456789999999999999995 5556666554


No 247
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00  E-value=1.9e-38  Score=290.77  Aligned_cols=223  Identities=19%  Similarity=0.274  Sum_probs=173.8

Q ss_pred             ccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHH-HcCCCCCcceeeEEEec----CCe
Q 047245          102 NRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVL-ASLRHRNLMSLRAYVPE----SSR  175 (380)
Q Consensus       102 ~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~----~~~  175 (380)
                      .++||+|+||.||++.. .+|+.||+|++..             ...+.+|+.++ +..+||||+++++++..    ...
T Consensus        23 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-------------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~   89 (299)
T 3m2w_A           23 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKC   89 (299)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEEC-------------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred             CcccccCCCeEEEEEEEcCCCcEEEEEEecc-------------cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCce
Confidence            36799999999999987 5789999999864             14566788888 55699999999999876    677


Q ss_pred             EEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCC---CCceEEecc
Q 047245          176 FYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDA---EFTPRLADF  252 (380)
Q Consensus       176 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~---~~~~kl~Df  252 (380)
                      .++||||+++|+|.+++..  .....+++..++.++.|++.||+|||   +.+++||||||+||+++.   ++.+||+||
T Consensus        90 ~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~Df  164 (299)
T 3m2w_A           90 LLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDF  164 (299)
T ss_dssp             EEEEECCCCSCBHHHHHHH--CTTCCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCC
T ss_pred             EEEEEeecCCCcHHHHHHh--ccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEecc
Confidence            8999999999999999985  22346999999999999999999999   899999999999999998   789999999


Q ss_pred             CCcccCCCCCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhh
Q 047245          253 GLAKLMPGSLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREAL  332 (380)
Q Consensus       253 gl~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  332 (380)
                      |++....                +..++.++||||||+++|||++|..||.........              ......+
T Consensus       165 g~a~~~~----------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~--------------~~~~~~~  214 (299)
T 3m2w_A          165 GFAKETT----------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS--------------PGMKTRI  214 (299)
T ss_dssp             TTCEECT----------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC---------------------CCSCCSS
T ss_pred             ccccccc----------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh--------------HHHHHHH
Confidence            9986543                245678999999999999999999998642111000              0000000


Q ss_pred             chhccCCc--ccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          333 DRSILGEE--VEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       333 ~~~~~~~~--~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      ........  ........+.+++.+||+.||++|||++|+++
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~  256 (299)
T 3m2w_A          215 RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  256 (299)
T ss_dssp             CTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            00000000  00123556889999999999999999999985


No 248
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00  E-value=1.8e-38  Score=289.05  Aligned_cols=228  Identities=15%  Similarity=0.115  Sum_probs=177.6

Q ss_pred             cccccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEE
Q 047245          101 ENRLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+.||+|+||.||++... +|+.||+|++......     .....+.+.+|+..+.+++||||+++++++.+.+..++|
T Consensus        35 i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv  109 (286)
T 3uqc_A           35 LLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVL-----PDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV  109 (286)
T ss_dssp             EEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCS-----CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             EEEEEcccCCeEEEEEEecCCCceEEEEEECccccc-----CHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence            4568999999999999975 4899999999753221     234557899999999999999999999999999999999


Q ss_pred             EeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCC
Q 047245          180 YDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMP  259 (380)
Q Consensus       180 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~  259 (380)
                      |||+++++|.+++..     . .......+++.|++.||+|||   +.+++||||||+|||++.++.+||+++|      
T Consensus       110 ~e~~~g~~L~~~l~~-----~-~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~------  174 (286)
T 3uqc_A          110 AEWIRGGSLQEVADT-----S-PSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPA------  174 (286)
T ss_dssp             EECCCEEEHHHHHTT-----C-CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCC------
T ss_pred             EEecCCCCHHHHHhc-----C-CChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEecc------
Confidence            999999999999852     1 355578899999999999999   8999999999999999999999998554      


Q ss_pred             CCCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhhchhccC-
Q 047245          260 GSLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREALDRSILG-  338 (380)
Q Consensus       260 ~~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-  338 (380)
                              |++       +++.++||||||+++|||++|+.||..........              .....+...... 
T Consensus       175 --------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~--------------~~~~~~~~~~~~~  225 (286)
T 3uqc_A          175 --------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLA--------------PAERDTAGQPIEP  225 (286)
T ss_dssp             --------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSE--------------ECCBCTTSCBCCH
T ss_pred             --------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhH--------------HHHHHhccCCCCh
Confidence                    333       36889999999999999999999987421110000              000000000000 


Q ss_pred             CcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHHHHhccc
Q 047245          339 EEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLH  378 (380)
Q Consensus       339 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~l~  378 (380)
                      ..........+.+++.+||+.||++| |+.|+++.|+++.
T Consensus       226 ~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~  264 (286)
T 3uqc_A          226 ADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQAT  264 (286)
T ss_dssp             HHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHH
T ss_pred             hhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHh
Confidence            00011234558899999999999999 9999999998864


No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00  E-value=8.3e-39  Score=306.18  Aligned_cols=238  Identities=17%  Similarity=0.155  Sum_probs=175.5

Q ss_pred             cccccCccCCeeEEEEEe-cCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCC-CCcc---------eeeEE
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRH-RNLM---------SLRAY  169 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv---------~l~~~  169 (380)
                      ..++||+|+||.||+|.. .+|+.||||++......     .....+.+.+|+.+++.++| +|..         .....
T Consensus        82 ~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~-----~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~  156 (413)
T 3dzo_A           82 RGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERP-----PSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  156 (413)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC---------CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred             EecccccCCCEEEEEEEecCCCCceEEEEEecCCCc-----cHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence            346899999999999995 57999999998742221     11224678899999999987 3221         11111


Q ss_pred             ------------Eec-----CCeEEEEEeecCCCCHHHHHHHhh---hcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCe
Q 047245          170 ------------VPE-----SSRFYLVYDYLQTGSLEDAMDRIR---ENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQI  229 (380)
Q Consensus       170 ------------~~~-----~~~~~lv~e~~~~gsL~~~l~~~~---~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~i  229 (380)
                                  ...     ....+++|+++ +++|.+++....   .....+++..++.++.|++.||+|||   +.+|
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i  232 (413)
T 3dzo_A          157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGL  232 (413)
T ss_dssp             EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred             cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCc
Confidence                        111     22457777765 679999986432   22445788899999999999999999   8999


Q ss_pred             EecCCCCCcEEeCCCCceEEeccCCcccCCC---CCcCCCcccCcccc----------cCCCCCCcchhhHHHHHHHHHH
Q 047245          230 LHYNLKPTNVMLDAEFTPRLADFGLAKLMPG---SLIATSAYSAPECF----------QNRSYTDKSDIFSFGMILAVLL  296 (380)
Q Consensus       230 iH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~---~~~~~~~y~aPE~~----------~~~~~~~~sDv~s~Gvil~el~  296 (380)
                      +||||||+|||++.++.+||+|||+++....   ...| +.|+|||.+          ....++.++|||||||++|||+
T Consensus       233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ell  311 (413)
T 3dzo_A          233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIW  311 (413)
T ss_dssp             ECSCCCGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHH
T ss_pred             ccCCcccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHH
Confidence            9999999999999999999999999876543   3457 999999999          5566889999999999999999


Q ss_pred             hCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhhchhccCCcccHHHHHHHHHHHHHcccCCCCCCCCHHhHHH
Q 047245          297 TGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVP  372 (380)
Q Consensus       297 tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~  372 (380)
                      +|+.||.......                     .....+....   ..+..+.+++.+||+.||++|||+.++++
T Consensus       312 tg~~Pf~~~~~~~---------------------~~~~~~~~~~---~~~~~~~~li~~~l~~dP~~Rpt~~~~l~  363 (413)
T 3dzo_A          312 CADLPNTDDAALG---------------------GSEWIFRSCK---NIPQPVRALLEGFLRYPKEDRLLPLQAME  363 (413)
T ss_dssp             HSSCCCCTTGGGS---------------------CSGGGGSSCC---CCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HCCCCCCCcchhh---------------------hHHHHHhhcc---cCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            9999986421110                     0111111110   12355889999999999999999887753


No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00  E-value=7.7e-38  Score=291.47  Aligned_cols=245  Identities=13%  Similarity=0.150  Sum_probs=182.1

Q ss_pred             ccccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCC---------CCCcceeeEEE
Q 047245          100 NENRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLR---------HRNLMSLRAYV  170 (380)
Q Consensus       100 ~~~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---------h~niv~l~~~~  170 (380)
                      ...+.||+|+||.||++.. +|+.||||++................+.+.+|+.++++++         ||||+++.+.+
T Consensus        23 ~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~  101 (336)
T 2vuw_A           23 QRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVH  101 (336)
T ss_dssp             HTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEE
T ss_pred             hheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhccee
Confidence            3567899999999999998 6899999999874322111112223466788888888885         88888887764


Q ss_pred             e------------------------------cCCeEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHH
Q 047245          171 P------------------------------ESSRFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQY  220 (380)
Q Consensus       171 ~------------------------------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~  220 (380)
                      .                              +.+..++||||+++|++.+.+.     ...+++..+..++.|++.||+|
T Consensus       102 ~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~-----~~~~~~~~~~~i~~qi~~aL~~  176 (336)
T 2vuw_A          102 CVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR-----TKLSSLATAKSILHQLTASLAV  176 (336)
T ss_dssp             EEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT-----TTCCCHHHHHHHHHHHHHHHHH
T ss_pred             EecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH-----hcCCCHHHHHHHHHHHHHHHHH
Confidence            2                              2678999999999998766664     2468999999999999999999


Q ss_pred             hHhcCCCCeEecCCCCCcEEeCCCC--------------------ceEEeccCCcccCCCC-CcCCCcccCcccccCCCC
Q 047245          221 LHFTCNPQILHYNLKPTNVMLDAEF--------------------TPRLADFGLAKLMPGS-LIATSAYSAPECFQNRSY  279 (380)
Q Consensus       221 LH~~~~~~iiH~dlk~~Nill~~~~--------------------~~kl~Dfgl~~~~~~~-~~~~~~y~aPE~~~~~~~  279 (380)
                      ||+  +.+|+||||||+|||++.++                    .+||+|||+++..... ..||+.|+|||.+.+.. 
T Consensus       177 lH~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~~~gt~~y~aPE~~~g~~-  253 (336)
T 2vuw_A          177 AEA--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLFTGDG-  253 (336)
T ss_dssp             HHH--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTEEECCCCTTCSGGGCCCS-
T ss_pred             HHH--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCCcEEEeecccChhhhcCCC-
Confidence            993  36799999999999999887                    8999999999876543 46999999999998766 


Q ss_pred             CCcchhhHHHHH-HHHHHhCCCCCCchhhhccCCCCHHHHHHHHHhhcchhHhhc-hhccCCcccHHHHHHHHHHHHHcc
Q 047245          280 TDKSDIFSFGMI-LAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREALD-RSILGEEVEEDEMLMAVRIAVVCL  357 (380)
Q Consensus       280 ~~~sDv~s~Gvi-l~el~tg~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~Cl  357 (380)
                      +.++||||++.+ .+++++|..||..           ..|.......  ...... ...............+.+++.+||
T Consensus       254 ~~~~Diwsl~~~~~~~~~~g~~p~~~-----------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L  320 (336)
T 2vuw_A          254 DYQFDIYRLMKKENNNRWGEYHPYSN-----------VLWLHYLTDK--MLKQMTFKTKCNTPAMKQIKRKIQEFHRTML  320 (336)
T ss_dssp             SHHHHHHHHHHHHHTTCTTSCCTHHH-----------HHHHHHHHHH--HHHTCCCSSCCCSHHHHHHHHHHHHHHHHGG
T ss_pred             ccceehhhhhCCCCcccccccCCCcc-----------hhhhhHHHHh--hhhhhccCcccchhhhhhcCHHHHHHHHHHh
Confidence            889999998776 7778889998742           1221111100  000000 001111223457788999999999


Q ss_pred             cCCCCCCCCHHhHH
Q 047245          358 SDSPADRPSSDELV  371 (380)
Q Consensus       358 ~~~P~~RPs~~evl  371 (380)
                      +.|     |++|++
T Consensus       321 ~~d-----sa~e~l  329 (336)
T 2vuw_A          321 NFS-----SATDLL  329 (336)
T ss_dssp             GSS-----SHHHHH
T ss_pred             ccC-----CHHHHH
Confidence            866     898887


No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.97  E-value=2.2e-31  Score=263.72  Aligned_cols=186  Identities=18%  Similarity=0.113  Sum_probs=130.3

Q ss_pred             cCccCCeeEEEEE-ecCCcEEEEEEeeeccCC--ChhhhcHHHHHHHHHHHHHHHcC-CCCCcceeeEEEecCCeEEEEE
Q 047245          105 LGSSPDGKYYRTV-LDNGLTVAVRRVEAFESG--SPEKQNKSVKRRIQQELEVLASL-RHRNLMSLRAYVPESSRFYLVY  180 (380)
Q Consensus       105 lg~G~~g~vy~~~-~~~g~~vavK~~~~~~~~--~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~  180 (380)
                      .+.|++|.+..+. ..-|+.+++|++......  ......+...++|.+|+++|+++ .|+||+++++++++++..||||
T Consensus       242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM  321 (569)
T 4azs_A          242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM  321 (569)
T ss_dssp             -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred             cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence            4556665554433 234788999999753211  11223345567899999999999 7999999999999999999999


Q ss_pred             eecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCCC
Q 047245          181 DYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMPG  260 (380)
Q Consensus       181 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~  260 (380)
                      ||++|++|.+++..    ..+++..   +|+.||+.||+|+|   +++||||||||+|||+++++.+||+|||+++....
T Consensus       322 Eyv~G~~L~d~i~~----~~~l~~~---~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~  391 (569)
T 4azs_A          322 EKLPGRLLSDMLAA----GEEIDRE---KILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ  391 (569)
T ss_dssp             ECCCSEEHHHHHHT----TCCCCHH---HHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred             ecCCCCcHHHHHHh----CCCCCHH---HHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence            99999999999974    3456553   58899999999999   99999999999999999999999999999987654


Q ss_pred             C------CcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCC
Q 047245          261 S------LIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDP  301 (380)
Q Consensus       261 ~------~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p  301 (380)
                      .      .+||+.|+|||.+.+ .+..++|+||+|++++++.++..+
T Consensus       392 ~~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~  437 (569)
T 4azs_A          392 DCSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN  437 (569)
T ss_dssp             --CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred             CCccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence            3      248999999999875 457789999999998887665544


No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.96  E-value=1.5e-29  Score=249.12  Aligned_cols=183  Identities=17%  Similarity=0.234  Sum_probs=149.1

Q ss_pred             ccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEecCCeEEEEEe
Q 047245          102 NRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLVYD  181 (380)
Q Consensus       102 ~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  181 (380)
                      .++||+|+||.||++.. .+..+++|+.................+++.+|++++++++||||+++..++...+..++|||
T Consensus       341 ~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE  419 (540)
T 3en9_A          341 EHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS  419 (540)
T ss_dssp             -------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred             CCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence            46899999999999955 57899999886643333333334456779999999999999999976666667777899999


Q ss_pred             ecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCCCC
Q 047245          182 YLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMPGS  261 (380)
Q Consensus       182 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~  261 (380)
                      |+++|+|.+++..            +..++.|+++||+|||   +.+|+||||||+|||+++  .+||+|||+++.....
T Consensus       420 ~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~  482 (540)
T 3en9_A          420 YINGKLAKDVIED------------NLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLD  482 (540)
T ss_dssp             CCCSEEHHHHSTT------------CTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEECCCH
T ss_pred             CCCCCCHHHHHHH------------HHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEECCCc
Confidence            9999999999873            4689999999999999   899999999999999999  9999999999987642


Q ss_pred             -------------CcCCCcccCcccccC--CCCCCcchhhHHHHHHHHHHhCCCCC
Q 047245          262 -------------LIATSAYSAPECFQN--RSYTDKSDIFSFGMILAVLLTGRDPT  302 (380)
Q Consensus       262 -------------~~~~~~y~aPE~~~~--~~~~~~sDv~s~Gvil~el~tg~~p~  302 (380)
                                   ..||+.|+|||.+..  ..|+...|+||...-.++-+.++.+|
T Consensus       483 ~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          483 EDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             cccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence                         248999999999987  66888899999999999988887776


No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.90  E-value=3.2e-24  Score=194.18  Aligned_cols=148  Identities=12%  Similarity=0.124  Sum_probs=115.2

Q ss_pred             ccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhh-hc---------HHHHHHHHHHHHHHHcCCCCCcceeeEEEe
Q 047245          102 NRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEK-QN---------KSVKRRIQQELEVLASLRHRNLMSLRAYVP  171 (380)
Q Consensus       102 ~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~-~~---------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~  171 (380)
                      .+.||+|+||.||+|...+|+.||+|.+.......... ..         ......+.+|+.++++++  | +++.+++.
T Consensus        95 ~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~  171 (282)
T 1zar_A           95 GKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYA  171 (282)
T ss_dssp             EEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEE
T ss_pred             cCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEe
Confidence            47899999999999999779999999996422111000 00         024577899999999999  4 56666554


Q ss_pred             cCCeEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEec
Q 047245          172 ESSRFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLAD  251 (380)
Q Consensus       172 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~D  251 (380)
                      . +..++||||+++|+|.+ +..          .....++.|++.||+|||   +.+++||||||+|||++ ++.+||+|
T Consensus       172 ~-~~~~lvmE~~~g~~L~~-l~~----------~~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NILl~-~~~vkl~D  235 (282)
T 1zar_A          172 W-EGNAVLMELIDAKELYR-VRV----------ENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVS-EEGIWIID  235 (282)
T ss_dssp             E-ETTEEEEECCCCEEGGG-CCC----------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEE-TTEEEECC
T ss_pred             c-cceEEEEEecCCCcHHH-cch----------hhHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHEEEE-CCcEEEEE
Confidence            3 45699999999999987 421          123569999999999999   89999999999999999 99999999


Q ss_pred             cCCcccCCCCCcCCCcccCccccc
Q 047245          252 FGLAKLMPGSLIATSAYSAPECFQ  275 (380)
Q Consensus       252 fgl~~~~~~~~~~~~~y~aPE~~~  275 (380)
                      ||+++..       ..+.|||.+.
T Consensus       236 FG~a~~~-------~~~~a~e~l~  252 (282)
T 1zar_A          236 FPQSVEV-------GEEGWREILE  252 (282)
T ss_dssp             CTTCEET-------TSTTHHHHHH
T ss_pred             CCCCeEC-------CCCCHHHHHH
Confidence            9999743       4568898874


No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.80  E-value=1.4e-19  Score=161.56  Aligned_cols=143  Identities=15%  Similarity=0.148  Sum_probs=105.2

Q ss_pred             cccccCccCCeeEEEEEe-cCCcE--EEEEEeeeccCCChh----------------hhcHHHHHHHHHHHHHHHcCCCC
Q 047245          101 ENRLLGSSPDGKYYRTVL-DNGLT--VAVRRVEAFESGSPE----------------KQNKSVKRRIQQELEVLASLRHR  161 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~-~~g~~--vavK~~~~~~~~~~~----------------~~~~~~~~~~~~E~~~l~~l~h~  161 (380)
                      ..+.||+|+||.||+|.. .+|+.  ||||+++........                .........+.+|+..+.+++|+
T Consensus        51 i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~  130 (258)
T 1zth_A           51 MGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEA  130 (258)
T ss_dssp             EEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhC
Confidence            456899999999999998 78999  999987542111000                00112334688999999999887


Q ss_pred             Cc--ceeeEEEecCCeEEEEEeecCC-C----CHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCC
Q 047245          162 NL--MSLRAYVPESSRFYLVYDYLQT-G----SLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNL  234 (380)
Q Consensus       162 ni--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dl  234 (380)
                      |+  ..++++    ...++||||+.+ |    +|.++...       .++.....++.|++.||.|||.  +.+++||||
T Consensus       131 ~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-------~~~~~~~~i~~qi~~~l~~lH~--~~givHrDl  197 (258)
T 1zth_A          131 GVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-------LKELDVEGIFNDVVENVKRLYQ--EAELVHADL  197 (258)
T ss_dssp             TCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-------GGGSCHHHHHHHHHHHHHHHHH--TSCEECSSC
T ss_pred             CCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-------cChHHHHHHHHHHHHHHHHHHH--HCCEEeCCC
Confidence            64  334432    346899999942 4    67766431       1234567899999999999994  468999999


Q ss_pred             CCCcEEeCCCCceEEeccCCcccC
Q 047245          235 KPTNVMLDAEFTPRLADFGLAKLM  258 (380)
Q Consensus       235 k~~Nill~~~~~~kl~Dfgl~~~~  258 (380)
                      ||+|||+++  .++|+|||++...
T Consensus       198 kp~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          198 SEYNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             STTSEEESS--SEEECCCTTCEET
T ss_pred             CHHHEEEcC--cEEEEECcccccC
Confidence            999999998  9999999999764


No 255
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.66  E-value=2.1e-16  Score=147.21  Aligned_cols=143  Identities=10%  Similarity=0.114  Sum_probs=99.1

Q ss_pred             cccccCccCCeeEEEEEecCCcEEEEEEeeeccCC----Chh--------hh--cHHHHHHHHHHHHHHHcCCCCCccee
Q 047245          101 ENRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESG----SPE--------KQ--NKSVKRRIQQELEVLASLRHRNLMSL  166 (380)
Q Consensus       101 ~~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~----~~~--------~~--~~~~~~~~~~E~~~l~~l~h~niv~l  166 (380)
                      ..+.||+|++|.||+|...+|+.||||+++.....    ...        ..  ....+.....|...|.++.+.++...
T Consensus        99 I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~vp  178 (397)
T 4gyi_A           99 VGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVP  178 (397)
T ss_dssp             EEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCC
T ss_pred             ecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence            56789999999999999999999999987642111    000        00  00111223457778888865554322


Q ss_pred             eEEEecCCeEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCC-
Q 047245          167 RAYVPESSRFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEF-  245 (380)
Q Consensus       167 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~-  245 (380)
                      .-+...  ..++||||+++++|.++..        .  .....++.|++.+|.|||   +.++|||||||.|||+++++ 
T Consensus       179 ~p~~~~--~~~LVME~i~G~~L~~l~~--------~--~~~~~l~~qll~~l~~lH---~~gIVHrDLKp~NILl~~dgd  243 (397)
T 4gyi_A          179 EPIAQS--RHTIVMSLVDALPMRQVSS--------V--PDPASLYADLIALILRLA---KHGLIHGDFNEFNILIREEKD  243 (397)
T ss_dssp             CEEEEE--TTEEEEECCSCEEGGGCCC--------C--SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEEEEEC
T ss_pred             eeeecc--CceEEEEecCCccHhhhcc--------c--HHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeCCCC
Confidence            212111  2379999999988855432        1  123568899999999999   88999999999999998776 


Q ss_pred             ---------ceEEeccCCcccC
Q 047245          246 ---------TPRLADFGLAKLM  258 (380)
Q Consensus       246 ---------~~kl~Dfgl~~~~  258 (380)
                               .+.|+||+-+-..
T Consensus       244 ~~d~~~~~~~~~iID~~Q~V~~  265 (397)
T 4gyi_A          244 AEDPSSITLTPIIIXFPQMVSM  265 (397)
T ss_dssp             SSCTTSEEEEEEECCCTTCEET
T ss_pred             cccccccccceEEEEeCCcccC
Confidence                     3899999976543


No 256
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.30  E-value=1e-11  Score=110.65  Aligned_cols=137  Identities=10%  Similarity=0.094  Sum_probs=104.7

Q ss_pred             ccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCC-CCCcceeeEEEecCCeEEEEE
Q 047245          102 NRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLR-HRNLMSLRAYVPESSRFYLVY  180 (380)
Q Consensus       102 ~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~  180 (380)
                      ...++.|+.+.||+.... |..+++|+........        ...+.+|+.+++.+. +.++.++++++.+.+..++||
T Consensus        19 ~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~--------~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~   89 (263)
T 3tm0_A           19 VKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGT--------TYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLM   89 (263)
T ss_dssp             EECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTS--------TTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred             EeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCC--------HHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEE
Confidence            456777888999998764 6899999986421111        134778999999884 677889999999889999999


Q ss_pred             eecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhc------------------------------------
Q 047245          181 DYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFT------------------------------------  224 (380)
Q Consensus       181 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~------------------------------------  224 (380)
                      ||++|.+|.+.+.         +......++.+++++|+.||..                                    
T Consensus        90 e~i~G~~l~~~~~---------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (263)
T 3tm0_A           90 SEADGVLCSEEYE---------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEE  160 (263)
T ss_dssp             ECCSSEEHHHHCC---------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGST
T ss_pred             EecCCeehhhccC---------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccc
Confidence            9999999877531         0112346888999999999951                                    


Q ss_pred             --------------------CCCCeEecCCCCCcEEeCCCCceEEeccCCcc
Q 047245          225 --------------------CNPQILHYNLKPTNVMLDAEFTPRLADFGLAK  256 (380)
Q Consensus       225 --------------------~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~  256 (380)
                                          ....++|||+++.||+++++..+.|+||+.+.
T Consensus       161 ~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T 3tm0_A          161 DTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             TCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred             cccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence                                01458999999999999876667799998764


No 257
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.23  E-value=2.3e-11  Score=107.93  Aligned_cols=128  Identities=16%  Similarity=0.115  Sum_probs=94.1

Q ss_pred             CccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCC--cceeeEEEecCCeEEEEEeec
Q 047245          106 GSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRN--LMSLRAYVPESSRFYLVYDYL  183 (380)
Q Consensus       106 g~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e~~  183 (380)
                      +.|..+.||+....+|..+++|.....   .        ...+..|+..++.+.+.+  +.+++++...++..++||||+
T Consensus        29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~---~--------~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i   97 (264)
T 1nd4_A           29 IGCSDAAVFRLSAQGRPVLFVKTDLSG---A--------LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEV   97 (264)
T ss_dssp             CTTSSCEEEEEECTTSCCEEEEEECSC---T--------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECC
T ss_pred             cCCCCceEEEEecCCCCeEEEEeCCcc---c--------chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEec
Confidence            455669999998877888999987541   0        134677899888885444  556888888888899999999


Q ss_pred             CCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcC--------------------------------------
Q 047245          184 QTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTC--------------------------------------  225 (380)
Q Consensus       184 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~--------------------------------------  225 (380)
                      +|.+|.  ..       ..+   ...++.++++.|+.||...                                      
T Consensus        98 ~G~~l~--~~-------~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (264)
T 1nd4_A           98 PGQDLL--SS-------HLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGL  165 (264)
T ss_dssp             SSEETT--TS-------CCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTC
T ss_pred             CCcccC--cC-------cCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCc
Confidence            998884  21       011   1356677777777777321                                      


Q ss_pred             -----------------CCCeEecCCCCCcEEeCCCCceEEeccCCcc
Q 047245          226 -----------------NPQILHYNLKPTNVMLDAEFTPRLADFGLAK  256 (380)
Q Consensus       226 -----------------~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~  256 (380)
                                       ...++|||++|.||+++++..+.|+||+.+.
T Consensus       166 ~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~  213 (264)
T 1nd4_A          166 APAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG  213 (264)
T ss_dssp             CHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             cHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence                             1229999999999999887667799999875


No 258
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.11  E-value=1.8e-10  Score=107.43  Aligned_cols=141  Identities=15%  Similarity=0.176  Sum_probs=104.1

Q ss_pred             cccCccCCeeEEEEEecCCcEEEEEEee--eccCCChhhhcHHHHHHHHHHHHHHHcCC--CCCcceeeEEEecC---Ce
Q 047245          103 RLLGSSPDGKYYRTVLDNGLTVAVRRVE--AFESGSPEKQNKSVKRRIQQELEVLASLR--HRNLMSLRAYVPES---SR  175 (380)
Q Consensus       103 ~~lg~G~~g~vy~~~~~~g~~vavK~~~--~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~---~~  175 (380)
                      +.|+.|.++.||+....+ ..+++|+..  ...       .......+.+|..+++.+.  +..+.++++++.+.   +.
T Consensus        44 ~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~-------~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~  115 (359)
T 3dxp_A           44 EQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSK-------LLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGR  115 (359)
T ss_dssp             EECCC-CCSCEEEEECSS-CEEEEECCCC-----------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSS
T ss_pred             EEcCCcccceEEEEEECC-ceEEEEeCCCCCCC-------CCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCC
Confidence            468899999999988754 678888765  211       0011246778999999996  45688899998776   45


Q ss_pred             EEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcC------------------------------
Q 047245          176 FYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTC------------------------------  225 (380)
Q Consensus       176 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------------------------------  225 (380)
                      .++||||++|..+.+..      ...++...+..++.++++.|+.||...                              
T Consensus       116 ~~~vme~v~G~~l~~~~------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (359)
T 3dxp_A          116 AFYIMEFVSGRVLWDQS------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLS  189 (359)
T ss_dssp             CEEEEECCCCBCCCCTT------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEecCCeecCCCc------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhc
Confidence            89999999997774311      224677788889999999999999521                              


Q ss_pred             -------------------------CCCeEecCCCCCcEEeCCCCc--eEEeccCCccc
Q 047245          226 -------------------------NPQILHYNLKPTNVMLDAEFT--PRLADFGLAKL  257 (380)
Q Consensus       226 -------------------------~~~iiH~dlk~~Nill~~~~~--~kl~Dfgl~~~  257 (380)
                                               ...++|||+++.||++++++.  +.|+||+.+..
T Consensus       190 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          190 ETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             CCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             CCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence                                     256999999999999997753  68999998864


No 259
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.91  E-value=1.4e-09  Score=99.02  Aligned_cols=180  Identities=14%  Similarity=0.110  Sum_probs=117.1

Q ss_pred             cccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcC-CCCC--cceeeEEEecCC---eE
Q 047245          103 RLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASL-RHRN--LMSLRAYVPESS---RF  176 (380)
Q Consensus       103 ~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~n--iv~l~~~~~~~~---~~  176 (380)
                      +.++.|....||+..    ..+++|....          ......+.+|...++.+ .+..  +.+.+......+   ..
T Consensus        26 ~~~~~G~~n~v~~v~----~~~vlR~~~~----------~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~   91 (304)
T 3sg8_A           26 EISGEGNDCIAYEIN----RDFIFKFPKH----------SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMS   91 (304)
T ss_dssp             CEEEECSSEEEEEST----TSEEEEEESS----------HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCS
T ss_pred             EecCCCCcceEEEEC----CEEEEEecCC----------cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcc
Confidence            457889999999752    5688887542          12346788999999888 4433  344555543333   34


Q ss_pred             EEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhc--------------------------------
Q 047245          177 YLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFT--------------------------------  224 (380)
Q Consensus       177 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~--------------------------------  224 (380)
                      |+|||+++|.+|.+...      ..++..++..++.++++.++.||..                                
T Consensus        92 ~~vm~~i~G~~l~~~~~------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (304)
T 3sg8_A           92 FAGFTKIKGVPLTPLLL------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSREL  165 (304)
T ss_dssp             CEEEECCCCEECCHHHH------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTS
T ss_pred             eEEEcccCCeECCcccc------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccC
Confidence            88999999988765322      1356666777777777777777741                                


Q ss_pred             -----------------------CCCCeEecCCCCCcEEeCC--CCceEEeccCCcccCCCCC--cCCCcc---cCcccc
Q 047245          225 -----------------------CNPQILHYNLKPTNVMLDA--EFTPRLADFGLAKLMPGSL--IATSAY---SAPECF  274 (380)
Q Consensus       225 -----------------------~~~~iiH~dlk~~Nill~~--~~~~kl~Dfgl~~~~~~~~--~~~~~y---~aPE~~  274 (380)
                                             ....++|+|+++.||++++  +..+.|+||+.+..-....  ......   ..|+..
T Consensus       166 ~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~  245 (304)
T 3sg8_A          166 KGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFV  245 (304)
T ss_dssp             CHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHH
T ss_pred             CcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHH
Confidence                                   1245899999999999998  4567899999876422110  001111   222221


Q ss_pred             cC-----CCC---------CCcchhhHHHHHHHHHHhCCCCC
Q 047245          275 QN-----RSY---------TDKSDIFSFGMILAVLLTGRDPT  302 (380)
Q Consensus       275 ~~-----~~~---------~~~sDv~s~Gvil~el~tg~~p~  302 (380)
                      ..     +..         ....+.|+++.++|.+.+|..+|
T Consensus       246 ~~~l~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          246 SKILNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW  287 (304)
T ss_dssp             HHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred             HHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence            10     111         11268999999999999998775


No 260
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.69  E-value=7.3e-08  Score=88.22  Aligned_cols=132  Identities=18%  Similarity=0.202  Sum_probs=92.9

Q ss_pred             ccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCC----CCcceeeEEEecCCeEE
Q 047245          102 NRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRH----RNLMSLRAYVPESSRFY  177 (380)
Q Consensus       102 ~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~~~~~~~~  177 (380)
                      .+.++.|....||+.    |..+++|....          ......+.+|..+++.+.+    ..+.+++++    +..+
T Consensus        42 v~~l~~G~~n~vy~v----g~~~vlR~~~~----------~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~  103 (320)
T 3r70_A           42 LRYLSSGDDSDTFLC----NEQYVVKVPKR----------DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRF  103 (320)
T ss_dssp             EEEEEECSSEEEEEE----TTTEEEEEESS----------HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSC
T ss_pred             EEeCCCCCCceEEEE----CCEEEEEeCCc----------HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcE
Confidence            356899999999987    66788887642          1223457889998888865    123445554    4568


Q ss_pred             EEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcC--------------------------------
Q 047245          178 LVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTC--------------------------------  225 (380)
Q Consensus       178 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~--------------------------------  225 (380)
                      +||||++|.++.+...      ..++..++..++.++++.++.||...                                
T Consensus       104 lvme~i~G~~l~~~~~------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (320)
T 3r70_A          104 NIMKYIKGERITYEQY------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEK  177 (320)
T ss_dssp             EEEECCCCBCCCHHHH------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeecCCcccccccc------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhh
Confidence            9999999988864321      13455555666667777777666321                                


Q ss_pred             ----------------------------CCCeEecCCCCCcEEeCCCCceEEeccCCccc
Q 047245          226 ----------------------------NPQILHYNLKPTNVMLDAEFTPRLADFGLAKL  257 (380)
Q Consensus       226 ----------------------------~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~  257 (380)
                                                  ...++|+|++|.||+++++..+.|+||+.+..
T Consensus       178 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~  237 (320)
T 3r70_A          178 EQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV  237 (320)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred             cccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence                                        23459999999999999976679999998854


No 261
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.61  E-value=4.5e-07  Score=80.65  Aligned_cols=133  Identities=15%  Similarity=0.161  Sum_probs=93.7

Q ss_pred             cCccCCe-eEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCC-CCCcceeeEEEecCCeEEEEEe
Q 047245          105 LGSSPDG-KYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLR-HRNLMSLRAYVPESSRFYLVYD  181 (380)
Q Consensus       105 lg~G~~g-~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e  181 (380)
                      +..|..| .||+.... ++..+.+|+-..           .....+.+|...|+.+. +--+.++++++.+.+..++|||
T Consensus        32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~-----------~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme  100 (272)
T 4gkh_A           32 DNVGQSGATIYRLYGKPNAPELFLKHGKG-----------SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTT  100 (272)
T ss_dssp             EECSSSSCEEEEEECCTTCCCEEEEEEET-----------HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEE
T ss_pred             ccCCCcCCeEEEEEecCCCeEEEEEECCC-----------CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEE
Confidence            4445554 68987754 466788898643           12356788999998884 4446788999999999999999


Q ss_pred             ecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcC------------------------------------
Q 047245          182 YLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTC------------------------------------  225 (380)
Q Consensus       182 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------------------------------------  225 (380)
                      +++|.++.+.....        ......++.+++..|+-||...                                    
T Consensus       101 ~l~G~~~~~~~~~~--------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (272)
T 4gkh_A          101 AIPGKTAFQVLEEY--------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERN  172 (272)
T ss_dssp             CCCSEEHHHHHHHC--------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGT
T ss_pred             eeCCccccccccCC--------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhcccccc
Confidence            99998887754321        1112345556666666666210                                    


Q ss_pred             -------------------CCCeEecCCCCCcEEeCCCCceEEeccCCcc
Q 047245          226 -------------------NPQILHYNLKPTNVMLDAEFTPRLADFGLAK  256 (380)
Q Consensus       226 -------------------~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~  256 (380)
                                         ...++|+|+.+.|||+++++.+-|+||+.+.
T Consensus       173 ~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~  222 (272)
T 4gkh_A          173 GWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG  222 (272)
T ss_dssp             TCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             chHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence                               1237999999999999988777899998775


No 262
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.51  E-value=1e-06  Score=79.94  Aligned_cols=135  Identities=16%  Similarity=0.174  Sum_probs=86.9

Q ss_pred             cccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCC---CcceeeEEEe-cCCeEEE
Q 047245          103 RLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHR---NLMSLRAYVP-ESSRFYL  178 (380)
Q Consensus       103 ~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~-~~~~~~l  178 (380)
                      +.++.|....||+.    |..+++|.-..          ......+.+|..+|+.+.+.   .+.+.+.++. ..+..++
T Consensus        25 ~~l~~G~~n~v~~v----g~~~VlR~~~~----------~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~   90 (306)
T 3tdw_A           25 ESLGEGFRNYAILV----NGDWVFRFPKS----------QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFV   90 (306)
T ss_dssp             EEEEECSSEEEEEE----TTTEEEEEESS----------HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEE
T ss_pred             eecCCCcceeEEEE----CCEEEEEecCC----------chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEE
Confidence            35778888899987    56788887421          12346788999999999642   2556677764 4456789


Q ss_pred             EEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHh-----------------------------------
Q 047245          179 VYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHF-----------------------------------  223 (380)
Q Consensus       179 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-----------------------------------  223 (380)
                      |||+++|..+.+...      ..++...+..++.++++.|+.||.                                   
T Consensus        91 v~e~i~G~~l~~~~~------~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l  164 (306)
T 3tdw_A           91 GYRKVQGQILGEDGM------AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLL  164 (306)
T ss_dssp             EEECCCSEECHHHHH------TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGS
T ss_pred             EEeccCCeECchhhh------hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhccccc
Confidence            999999988765211      011222222223333333333321                                   


Q ss_pred             ----------------------cCCCCeEecCCCCCcEEeCC---CCc-eEEeccCCccc
Q 047245          224 ----------------------TCNPQILHYNLKPTNVMLDA---EFT-PRLADFGLAKL  257 (380)
Q Consensus       224 ----------------------~~~~~iiH~dlk~~Nill~~---~~~-~kl~Dfgl~~~  257 (380)
                                            .....++|+|+++.||++++   ++. +.|+||+.+..
T Consensus       165 ~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          165 DESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             CHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             chhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence                                  12456799999999999987   455 48999997753


No 263
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.51  E-value=1.7e-06  Score=77.83  Aligned_cols=75  Identities=16%  Similarity=0.158  Sum_probs=57.9

Q ss_pred             ccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCC---CcceeeEEEecCCeEEE
Q 047245          102 NRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHR---NLMSLRAYVPESSRFYL  178 (380)
Q Consensus       102 ~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~l  178 (380)
                      .+.|+.|.++.||++...+|+.++||+.....   ..     ....|..|+..|+.+++.   .+.+++++.    ..++
T Consensus        20 ~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~---~~-----~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~l   87 (288)
T 3d1u_A           20 VAERGHSHRWHLYRVELADGTPLFVKALPDDA---PA-----LDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTL   87 (288)
T ss_dssp             EEEEEEETTEEEEEEEETTSCEEEEEECCTTC---CC-----CTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEE
T ss_pred             eeeeCCcchhheEEEEeCCCCeEEEEecCCCC---cc-----hhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEE
Confidence            35689999999999999899999999864311   10     125678999999999765   577777764    3699


Q ss_pred             EEeecCCCCH
Q 047245          179 VYDYLQTGSL  188 (380)
Q Consensus       179 v~e~~~~gsL  188 (380)
                      ||||++++++
T Consensus        88 vme~l~g~~~   97 (288)
T 3d1u_A           88 AMEWVDERPP   97 (288)
T ss_dssp             EEECCCCCCC
T ss_pred             EEEecccCCC
Confidence            9999999875


No 264
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.26  E-value=5.7e-06  Score=76.92  Aligned_cols=141  Identities=16%  Similarity=0.152  Sum_probs=88.1

Q ss_pred             cccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCC--cceeeEEEecC-CeEEEE
Q 047245          103 RLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRN--LMSLRAYVPES-SRFYLV  179 (380)
Q Consensus       103 ~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~-~~~~lv  179 (380)
                      +.++.|....+|+... +|..+++|....    .         ..+..|...++.+....  +.++++++... +..++|
T Consensus        47 ~~l~gG~~n~~y~v~~-~g~~~vlK~~~~----~---------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv  112 (362)
T 3ovc_A           47 MQLSEGEESRAFSFDV-GGRGYVLRVNSC----A---------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCI  112 (362)
T ss_dssp             EEEEECSSEEEEEEEE-TTEEEEEEEESC----C---------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEE
T ss_pred             EECCCCCcceEEEEEE-CCcEEEEEeCCc----h---------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEE
Confidence            4578899999999876 578899987743    0         24778888888886433  56677777654 678999


Q ss_pred             EeecCCCCHHH---------------HHHHhhhcc----------------cCCCHHHHH--------------------
Q 047245          180 YDYLQTGSLED---------------AMDRIRENQ----------------LQLGWEVRL--------------------  208 (380)
Q Consensus       180 ~e~~~~gsL~~---------------~l~~~~~~~----------------~~l~~~~~~--------------------  208 (380)
                      |||++|.++.+               .+.......                ..-.|...+                    
T Consensus       113 ~e~l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~  192 (362)
T 3ovc_A          113 SRRAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVS  192 (362)
T ss_dssp             EECCCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTH
T ss_pred             EEecCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhccc
Confidence            99999755431               111110000                001122111                    


Q ss_pred             -HHHHHHHHHHHHhHhcC-CCCeEecCCCCCcEEeCCCCceEEeccCCccc
Q 047245          209 -RIAVGVIKGLQYLHFTC-NPQILHYNLKPTNVMLDAEFTPRLADFGLAKL  257 (380)
Q Consensus       209 -~i~~~ia~~l~~LH~~~-~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~  257 (380)
                       .....+...++++.... .+.++|+|+.+.||+++++..+.|+||+.+..
T Consensus       193 ~~~~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~  243 (362)
T 3ovc_A          193 ASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF  243 (362)
T ss_dssp             HHHHHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred             ccchHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence             11112222233332111 25689999999999998877788999998764


No 265
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.19  E-value=1.8e-05  Score=72.59  Aligned_cols=31  Identities=16%  Similarity=0.272  Sum_probs=28.2

Q ss_pred             CCCeEecCCCCCcEEeCCCCceEEeccCCcc
Q 047245          226 NPQILHYNLKPTNVMLDAEFTPRLADFGLAK  256 (380)
Q Consensus       226 ~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~  256 (380)
                      ...++|||+.+.||+++.++.+.|+||+.+.
T Consensus       221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~  251 (346)
T 2q83_A          221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVS  251 (346)
T ss_dssp             SCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred             cCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence            5789999999999999888899999999764


No 266
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.14  E-value=5.5e-06  Score=76.70  Aligned_cols=82  Identities=11%  Similarity=0.055  Sum_probs=52.5

Q ss_pred             ccc-CccCCeeEEEEEec-------CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCC-C--CCcceeeEEEe
Q 047245          103 RLL-GSSPDGKYYRTVLD-------NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLR-H--RNLMSLRAYVP  171 (380)
Q Consensus       103 ~~l-g~G~~g~vy~~~~~-------~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~  171 (380)
                      +.| +.|....+|+....       ++..+++|.-..........     ...+.+|..+++.+. +  ..+.++++++.
T Consensus        26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~-----~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~  100 (357)
T 3ats_A           26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFP-----TYRLDHQFEVIRLVGELTDVPVPRVRWIET  100 (357)
T ss_dssp             EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSS-----CCCHHHHHHHHHHHHHHCCSCCCCEEEEEC
T ss_pred             EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCc-----hhHHHHHHHHHHHHhhcCCCCCCcEEEEcc
Confidence            356 77888999988764       26678888764311000000     134567888888773 3  35677888876


Q ss_pred             cC---CeEEEEEeecCCCCHH
Q 047245          172 ES---SRFYLVYDYLQTGSLE  189 (380)
Q Consensus       172 ~~---~~~~lv~e~~~~gsL~  189 (380)
                      +.   +..++||||++|..+.
T Consensus       101 ~~~~~g~~~~v~e~l~G~~l~  121 (357)
T 3ats_A          101 TGDVLGTPFFLMDYVEGVVPP  121 (357)
T ss_dssp             SSTTTSSCEEEEECCCCBCCC
T ss_pred             CCCccCCceEEEEecCCCChh
Confidence            65   3568999999886543


No 267
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.87  E-value=6.9e-05  Score=70.40  Aligned_cols=81  Identities=9%  Similarity=-0.005  Sum_probs=47.2

Q ss_pred             cccCccCCeeEEEEEec-CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCC--CC-cceeeEEEecCCeEEE
Q 047245          103 RLLGSSPDGKYYRTVLD-NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRH--RN-LMSLRAYVPESSRFYL  178 (380)
Q Consensus       103 ~~lg~G~~g~vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~n-iv~l~~~~~~~~~~~l  178 (380)
                      +.+|.|..+.||++... ++..+++|..........+ ........+..|.++++.+..  +. +.+++.+.  .+..++
T Consensus        36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~-~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~~~~l  112 (397)
T 2olc_A           36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGE-SWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEMAVT  112 (397)
T ss_dssp             EECCSSSSEEEEEEEC----CEEEEEEECCC--------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTTTEE
T ss_pred             EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCC-CCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CCccEE
Confidence            46899999999999754 4688999986532110000 000011345668888887732  33 34555443  344689


Q ss_pred             EEeecCCC
Q 047245          179 VYDYLQTG  186 (380)
Q Consensus       179 v~e~~~~g  186 (380)
                      |||++++.
T Consensus       113 vmE~l~g~  120 (397)
T 2olc_A          113 VMEDLSHL  120 (397)
T ss_dssp             EECCCTTS
T ss_pred             EEEeCCCc
Confidence            99999764


No 268
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.67  E-value=0.00027  Score=63.21  Aligned_cols=74  Identities=15%  Similarity=0.119  Sum_probs=51.7

Q ss_pred             cccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCC-C--CCcceeeEEEecCCeEEEE
Q 047245          103 RLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLR-H--RNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       103 ~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~~~~~lv  179 (380)
                      ..+|.|..+.||+..+.||+.+.+|+-......   .     ...|..|...|+.|. .  --+.+.+++.    .-++|
T Consensus        21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~---~-----~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv   88 (288)
T 3f7w_A           21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPA---L-----DGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLA   88 (288)
T ss_dssp             EEEEEETTEEEEEEEETTSCEEEEEECCTTCCC---C-----TTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEE
T ss_pred             EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcc---h-----hhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEE
Confidence            458999999999999999999999986432111   0     145778999888884 2  2344555543    23789


Q ss_pred             EeecCCCCH
Q 047245          180 YDYLQTGSL  188 (380)
Q Consensus       180 ~e~~~~gsL  188 (380)
                      |||++++..
T Consensus        89 ~e~l~~~~~   97 (288)
T 3f7w_A           89 MEWVDERPP   97 (288)
T ss_dssp             EECCCCCCC
T ss_pred             EEeecccCC
Confidence            999987653


No 269
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.65  E-value=0.0012  Score=59.77  Aligned_cols=138  Identities=19%  Similarity=0.166  Sum_probs=90.1

Q ss_pred             cccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCC---CCCcceeeEEEecCCeEEEE
Q 047245          103 RLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLR---HRNLMSLRAYVPESSRFYLV  179 (380)
Q Consensus       103 ~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv  179 (380)
                      +.|+.|....+|+... ++..+++|+....           ....+..|...|+.|.   ...+.+.++++...+..++|
T Consensus        42 ~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~-----------~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lv  109 (312)
T 3jr1_A           42 EKLYSGEMNEIWLIND-EVQTVFVKINERS-----------YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLL  109 (312)
T ss_dssp             EEECCSSSSEEEEEES-SSCEEEEEEEEGG-----------GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEE
T ss_pred             EEeCCccceeeeEEEE-CCCeEEEEeCCcc-----------cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEE
Confidence            3578899999999876 4678888886531           1356788988888883   35678889988888899999


Q ss_pred             EeecCCCCHH--------H---HHHHhhh-cc-----------------cCCCHHHHH---HHHHH--------------
Q 047245          180 YDYLQTGSLE--------D---AMDRIRE-NQ-----------------LQLGWEVRL---RIAVG--------------  213 (380)
Q Consensus       180 ~e~~~~gsL~--------~---~l~~~~~-~~-----------------~~l~~~~~~---~i~~~--------------  213 (380)
                      |||+++..+.        +   .+|.... ..                 -.-+|....   ++..+              
T Consensus       110 me~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~  189 (312)
T 3jr1_A          110 LEALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNI  189 (312)
T ss_dssp             EECCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCH
T ss_pred             EEeccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHH
Confidence            9999987642        1   1222111 00                 012465322   11111              


Q ss_pred             --HHHH-HHHhH-hcCCCCeEecCCCCCcEEeCCCCceEEeccC
Q 047245          214 --VIKG-LQYLH-FTCNPQILHYNLKPTNVMLDAEFTPRLADFG  253 (380)
Q Consensus       214 --ia~~-l~~LH-~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfg  253 (380)
                        +... ...|. ....+.++|+|+.+.|++++.++ +.|.|+.
T Consensus       190 ~~l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~  232 (312)
T 3jr1_A          190 DLIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA  232 (312)
T ss_dssp             HHHHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred             HHHHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence              1111 22332 12357799999999999999887 8899974


No 270
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.64  E-value=0.00033  Score=66.27  Aligned_cols=73  Identities=16%  Similarity=0.129  Sum_probs=47.3

Q ss_pred             CCCeEecCCCCCcEEeCCCCceEEeccCCcccCCCCC-----c--CCCcccCcccccCC---CCCCcchhhHHHHHHHHH
Q 047245          226 NPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMPGSL-----I--ATSAYSAPECFQNR---SYTDKSDIFSFGMILAVL  295 (380)
Q Consensus       226 ~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~-----~--~~~~y~aPE~~~~~---~~~~~sDv~s~Gvil~el  295 (380)
                      ...++|||+++.|||+++++ ++|+||+.+..-....     .  -...|.+|+.....   ......++.+....+|+.
T Consensus       231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL  309 (420)
T ss_dssp             CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence            67899999999999998876 9999999886532110     0  11235555544311   111235566778888887


Q ss_pred             HhCC
Q 047245          296 LTGR  299 (380)
Q Consensus       296 ~tg~  299 (380)
                      +++.
T Consensus       310 y~~~  313 (420)
T 2pyw_A          310 FNKR  313 (420)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7653


No 271
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.47  E-value=0.00057  Score=62.39  Aligned_cols=32  Identities=25%  Similarity=0.314  Sum_probs=27.7

Q ss_pred             CCCeEecCCCCCcEEeCCC----CceEEeccCCccc
Q 047245          226 NPQILHYNLKPTNVMLDAE----FTPRLADFGLAKL  257 (380)
Q Consensus       226 ~~~iiH~dlk~~Nill~~~----~~~kl~Dfgl~~~  257 (380)
                      ...++|||+.+.||+++.+    ..+.|+||+.+..
T Consensus       182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~  217 (333)
T 3csv_A          182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL  217 (333)
T ss_dssp             CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred             CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence            5679999999999999875    6789999998764


No 272
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=97.44  E-value=0.001  Score=56.13  Aligned_cols=103  Identities=15%  Similarity=0.016  Sum_probs=67.6

Q ss_pred             CCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcccCCCCCcCC
Q 047245          186 GSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMPGSLIAT  265 (380)
Q Consensus       186 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~  265 (380)
                      -||.+.|..   ...++++.+.|.++.|.+.+|.-+-....+  ..+=+.|..|++..+|.+.+.+ ..+.      ...
T Consensus        33 vSL~eIL~~---~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~V~f~~-~~s~------~~~  100 (229)
T 2yle_A           33 LSLEEILRL---YNQPINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGAVTLAP-AADD------AGE  100 (229)
T ss_dssp             EEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSCEEECC-C------------
T ss_pred             ccHHHHHHH---cCCCcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCceeccc-cccc------ccc
Confidence            479999874   467899999999999999988776211011  1222446899999999998874 2111      123


Q ss_pred             CcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCC
Q 047245          266 SAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDP  301 (380)
Q Consensus       266 ~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p  301 (380)
                      ..+.+||... ...+.+.=|||+|+++|.-+--..|
T Consensus       101 ~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~  135 (229)
T 2yle_A          101 PPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK  135 (229)
T ss_dssp             ------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             cCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence            3466888763 3457788999999999999984444


No 273
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.25  E-value=0.00071  Score=60.81  Aligned_cols=31  Identities=13%  Similarity=0.117  Sum_probs=25.7

Q ss_pred             CCCeEecCCCCCcEEeCCCCceEEeccCCccc
Q 047245          226 NPQILHYNLKPTNVMLDAEFTPRLADFGLAKL  257 (380)
Q Consensus       226 ~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~  257 (380)
                      ...++|+|+.+.||+ .+++.+.++||..+..
T Consensus       172 ~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~  202 (301)
T 3dxq_A          172 PLAACHCDPLCENFL-DTGERMWIVDWEYSGM  202 (301)
T ss_dssp             CCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             CceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence            455899999999999 5666789999987753


No 274
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.19  E-value=0.0017  Score=58.73  Aligned_cols=157  Identities=17%  Similarity=0.155  Sum_probs=83.5

Q ss_pred             CChHHHHHHHhcc-------ccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCC
Q 047245           89 IDPKTLQAALANE-------NRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHR  161 (380)
Q Consensus        89 ~~~~~l~~~~~~~-------~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~  161 (380)
                      ++..++.......       -+.|+.|....+|+....+| .+++|......          ....+..|..++..+...
T Consensus         7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~----------~~~~l~~e~~~l~~L~~~   75 (322)
T 2ppq_A            7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV----------EKNDLPFFLGLMQHLAAK   75 (322)
T ss_dssp             CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-------------CCHHHHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC----------CHHHHHHHHHHHHHHHHC
Confidence            4455555554432       12356677789999887666 67888875410          012344566666666321


Q ss_pred             C--cceeeEE------EecCCeEEEEEeecCCCCHH-----H---------HHHHhhhc-ccC-------CCHHHHHHH-
Q 047245          162 N--LMSLRAY------VPESSRFYLVYDYLQTGSLE-----D---------AMDRIREN-QLQ-------LGWEVRLRI-  210 (380)
Q Consensus       162 n--iv~l~~~------~~~~~~~~lv~e~~~~gsL~-----~---------~l~~~~~~-~~~-------l~~~~~~~i-  210 (380)
                      +  +.+++..      ....+..+++++|++|..+.     .         .+|..... ..+       ..|...+.- 
T Consensus        76 g~~vP~~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~  155 (322)
T 2ppq_A           76 GLSCPLPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKS  155 (322)
T ss_dssp             TCCCCCBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHH
T ss_pred             CCCCCcccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHH
Confidence            2  2333321      12235679999999885431     1         12211100 000       123321110 


Q ss_pred             -----------HHHHHHHHHHhHhc----CCCCeEecCCCCCcEEeCCCCceEEeccCCcc
Q 047245          211 -----------AVGVIKGLQYLHFT----CNPQILHYNLKPTNVMLDAEFTPRLADFGLAK  256 (380)
Q Consensus       211 -----------~~~ia~~l~~LH~~----~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~  256 (380)
                                 ...+...+++++..    ....++|+|+.+.||+++++..+.|+||+.+.
T Consensus       156 ~~~~~~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~  216 (322)
T 2ppq_A          156 EERADEVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC  216 (322)
T ss_dssp             GGGGGGTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             HHHHHhhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence                       11234445555532    23578999999999999987666899998764


No 275
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.10  E-value=0.0038  Score=56.61  Aligned_cols=158  Identities=14%  Similarity=0.173  Sum_probs=85.8

Q ss_pred             CCChHHHHHHHhcc-------ccccCccCCeeEEEEEecCCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCC
Q 047245           88 KIDPKTLQAALANE-------NRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRH  160 (380)
Q Consensus        88 ~~~~~~l~~~~~~~-------~~~lg~G~~g~vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h  160 (380)
                      ..+...+.......       -..++ |....||+....+|..+++|.......      .   ...+..|..++..+..
T Consensus        10 ~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~------~---~~~~~~E~~~~~~L~~   79 (328)
T 1zyl_A           10 TLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPERW------T---ADQILEEHQFALQLVN   79 (328)
T ss_dssp             CCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTTS------C---HHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCCC------C---HHHHHHHHHHHHHHHH
Confidence            44555565554431       12355 777899988777787899999853110      0   1345567777776632


Q ss_pred             C--CcceeeEE-----EecCCeEEEEEeecCCCCHH-----H------H---HHHhhhc-----ccCCCHHHH----HHH
Q 047245          161 R--NLMSLRAY-----VPESSRFYLVYDYLQTGSLE-----D------A---MDRIREN-----QLQLGWEVR----LRI  210 (380)
Q Consensus       161 ~--niv~l~~~-----~~~~~~~~lv~e~~~~gsL~-----~------~---l~~~~~~-----~~~l~~~~~----~~i  210 (380)
                      .  .+.+++..     ....+..++++++++|..+.     .      .   +|.....     ....++...    ..+
T Consensus        80 ~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (328)
T 1zyl_A           80 DEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKL  159 (328)
T ss_dssp             TTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHH
T ss_pred             cCCeecceeecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHH
Confidence            1  23334432     12245678899999874321     1      1   1211110     011222211    001


Q ss_pred             ---------------HHHHHHHHHHhHhc----CCCCeEecCCCCCcEEeCCCCceEEeccCCccc
Q 047245          211 ---------------AVGVIKGLQYLHFT----CNPQILHYNLKPTNVMLDAEFTPRLADFGLAKL  257 (380)
Q Consensus       211 ---------------~~~ia~~l~~LH~~----~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~  257 (380)
                                     ...+...++.+...    ....++|||+++.||+++ + .+.|+||+.+..
T Consensus       160 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~  223 (328)
T 1zyl_A          160 FEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN  223 (328)
T ss_dssp             HHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred             HhhcCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence                           01111223333211    245689999999999999 4 899999987753


No 276
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.99  E-value=0.0016  Score=61.74  Aligned_cols=71  Identities=13%  Similarity=0.111  Sum_probs=46.2

Q ss_pred             cccCccCCeeEEEEEecC--------CcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCc-ceeeEEEecC
Q 047245          103 RLLGSSPDGKYYRTVLDN--------GLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNL-MSLRAYVPES  173 (380)
Q Consensus       103 ~~lg~G~~g~vy~~~~~~--------g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~  173 (380)
                      +.|+.|....+|+....+        +..+.+|+....   .    .   ...+..|..+++.+...++ .++++.+.+ 
T Consensus        79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~---~----~---~~~li~E~~~l~~L~~~g~~P~l~~~~~~-  147 (429)
T 1nw1_A           79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP---E----T---ESHLVAESVIFTLLSERHLGPKLYGIFSG-  147 (429)
T ss_dssp             EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC---C----C---HHHHHHHHHHHHHHHHTTSSSCEEEEETT-
T ss_pred             EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC---C----c---HHHHHHHHHHHHHHHhCCCCCcEEEEeCC-
Confidence            347778889999998753        478888887321   0    0   0234468888888843333 567776643 


Q ss_pred             CeEEEEEeecCCCC
Q 047245          174 SRFYLVYDYLQTGS  187 (380)
Q Consensus       174 ~~~~lv~e~~~~gs  187 (380)
                         .+|+||++|.+
T Consensus       148 ---g~v~e~l~G~~  158 (429)
T 1nw1_A          148 ---GRLEEYIPSRP  158 (429)
T ss_dssp             ---EEEECCCCEEE
T ss_pred             ---CEEEEEeCCcc
Confidence               28999998633


No 277
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.99  E-value=0.0022  Score=59.64  Aligned_cols=140  Identities=16%  Similarity=0.147  Sum_probs=79.5

Q ss_pred             ccCccCCeeEEEEEec--------CCcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCC-CCCcceeeEEEecCC
Q 047245          104 LLGSSPDGKYYRTVLD--------NGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLR-HRNLMSLRAYVPESS  174 (380)
Q Consensus       104 ~lg~G~~g~vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~  174 (380)
                      .|..|-...+|+....        ++..+.+|+.....         .....+.+|..+++.+. +.-..++++++.++ 
T Consensus        57 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~---------~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~g-  126 (379)
T 3feg_A           57 PVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL---------QGVDSLVLESVMFAILAERSLGPQLYGVFPEG-  126 (379)
T ss_dssp             EC-----CCEEEEECCTTSCCCSSCCSEEEEEECC------------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETTE-
T ss_pred             EcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc---------chHHHHHHHHHHHHHHHhcCCCCeEEEEcCCc-
Confidence            4666777889998874        24688888753210         01244558888888884 33345677776542 


Q ss_pred             eEEEEEeecCCCCHHH--------------HHHHhhhc----ccCCC--HHHHHHHHHHHHH------------------
Q 047245          175 RFYLVYDYLQTGSLED--------------AMDRIREN----QLQLG--WEVRLRIAVGVIK------------------  216 (380)
Q Consensus       175 ~~~lv~e~~~~gsL~~--------------~l~~~~~~----~~~l~--~~~~~~i~~~ia~------------------  216 (380)
                         +|+||++|.+|..              .|...-..    .....  |.++.++..++..                  
T Consensus       127 ---~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~  203 (379)
T 3feg_A          127 ---RLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLK  203 (379)
T ss_dssp             ---EEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHH
T ss_pred             ---cEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHH
Confidence               8999999754421              11111111    11122  3444444443321                  


Q ss_pred             -HHHHhH----h-cCCCCeEecCCCCCcEEeCCC----CceEEeccCCcc
Q 047245          217 -GLQYLH----F-TCNPQILHYNLKPTNVMLDAE----FTPRLADFGLAK  256 (380)
Q Consensus       217 -~l~~LH----~-~~~~~iiH~dlk~~Nill~~~----~~~kl~Dfgl~~  256 (380)
                       .+..|.    . .....++|+|+.+.||+++++    +.+.++||..+.
T Consensus       204 ~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~  253 (379)
T 3feg_A          204 DEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS  253 (379)
T ss_dssp             HHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred             HHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence             223332    1 123568999999999999876    789999998775


No 278
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.88  E-value=0.0018  Score=59.34  Aligned_cols=32  Identities=19%  Similarity=0.265  Sum_probs=27.9

Q ss_pred             CCCeEecCCCCCcEEeCCCCceEEeccCCccc
Q 047245          226 NPQILHYNLKPTNVMLDAEFTPRLADFGLAKL  257 (380)
Q Consensus       226 ~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~~  257 (380)
                      ...++|+|+.+.||++++++.+.|+||+.+..
T Consensus       205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~  236 (339)
T 3i1a_A          205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML  236 (339)
T ss_dssp             GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred             CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence            45799999999999999888899999987653


No 279
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.67  E-value=0.01  Score=56.58  Aligned_cols=73  Identities=8%  Similarity=0.102  Sum_probs=45.2

Q ss_pred             cccCccCCeeEEEEEecC-CcEEEEEEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCc-ceeeEEEecCCeEEEEE
Q 047245          103 RLLGSSPDGKYYRTVLDN-GLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNL-MSLRAYVPESSRFYLVY  180 (380)
Q Consensus       103 ~~lg~G~~g~vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~  180 (380)
                      +.|+.|-...+|+....+ +..+.+|+......   ..      -.-.+|..++..|...++ .++++.+..    .+|+
T Consensus       114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~---~~------idR~~E~~vl~~L~~~gl~P~ll~~~~~----G~v~  180 (458)
T 2qg7_A          114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTD---EI------INREREKKISCILYNKNIAKKIYVFFTN----GRIE  180 (458)
T ss_dssp             EEECC--CEEEEEEEETTTTEEEEEEEECC-CC---SC------SCHHHHHHHHHHHTTSSSBCCEEEEETT----EEEE
T ss_pred             EEcCCCeEeEEEEEEECCCCceEEEEECCCChh---hh------cCHHHHHHHHHHHHhcCCCCCEEEEeCC----eEEE
Confidence            357778889999988765 47788887643110   00      011468888888865455 456776632    2499


Q ss_pred             eecCCCCH
Q 047245          181 DYLQTGSL  188 (380)
Q Consensus       181 e~~~~gsL  188 (380)
                      ||++|.+|
T Consensus       181 e~I~G~~l  188 (458)
T 2qg7_A          181 EFMDGYAL  188 (458)
T ss_dssp             ECCCSEEC
T ss_pred             EeeCCccC
Confidence            99987443


No 280
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.50  E-value=0.0032  Score=58.29  Aligned_cols=30  Identities=23%  Similarity=0.348  Sum_probs=24.9

Q ss_pred             CCCeEecCCCCCcEEeCCCCceEEeccCCcc
Q 047245          226 NPQILHYNLKPTNVMLDAEFTPRLADFGLAK  256 (380)
Q Consensus       226 ~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~  256 (380)
                      ...++|+|+.+.|||++++. +.|+||..+.
T Consensus       211 ~~~l~HgDl~~~Nil~~~~~-~~lID~e~a~  240 (369)
T 3c5i_A          211 TIVFCHNDLQENNIINTNKC-LRLIDFEYSG  240 (369)
T ss_dssp             CEEEECSCCCGGGEEECC-C-EEECCCTTCE
T ss_pred             CeEEEeCCCCcccEEecCCc-EEEEEecCCC
Confidence            45689999999999998655 8999998775


No 281
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.67  E-value=0.022  Score=53.17  Aligned_cols=149  Identities=15%  Similarity=0.137  Sum_probs=79.5

Q ss_pred             ccCccCCeeEEEEEecC--------CcEEEEEEeeeccCCC------hhhhcHH----HHHHHHHHHHHHHcCC-CCCcc
Q 047245          104 LLGSSPDGKYYRTVLDN--------GLTVAVRRVEAFESGS------PEKQNKS----VKRRIQQELEVLASLR-HRNLM  164 (380)
Q Consensus       104 ~lg~G~~g~vy~~~~~~--------g~~vavK~~~~~~~~~------~~~~~~~----~~~~~~~E~~~l~~l~-h~niv  164 (380)
                      .|..|-...+|+...++        +..+.++........-      ....+..    .......|..+++.+. +.-..
T Consensus        59 ~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~P  138 (401)
T 3f2s_A           59 VIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLGP  138 (401)
T ss_dssp             EEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSSC
T ss_pred             EcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCCC
Confidence            35556778889888754        3678888764321100      0000000    0122345888888884 44455


Q ss_pred             eeeEEEecCCeEEEEEeecCCCCHHH--------------HHHHhhhc----ccCCC--HHHHHHHHHHHH---------
Q 047245          165 SLRAYVPESSRFYLVYDYLQTGSLED--------------AMDRIREN----QLQLG--WEVRLRIAVGVI---------  215 (380)
Q Consensus       165 ~l~~~~~~~~~~~lv~e~~~~gsL~~--------------~l~~~~~~----~~~l~--~~~~~~i~~~ia---------  215 (380)
                      ++++++.++    +|+||+++-+|..              .+...-..    .....  |..+.++..++.         
T Consensus       139 kl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~  214 (401)
T 3f2s_A          139 KLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEESR  214 (401)
T ss_dssp             CEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHHH
T ss_pred             eEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchhh
Confidence            677776532    8999998744321              11111111    11122  223333333221         


Q ss_pred             -------------HHH----HHhHh-cCCCCeEecCCCCCcEEeCCC------CceEEeccCCcc
Q 047245          216 -------------KGL----QYLHF-TCNPQILHYNLKPTNVMLDAE------FTPRLADFGLAK  256 (380)
Q Consensus       216 -------------~~l----~~LH~-~~~~~iiH~dlk~~Nill~~~------~~~kl~Dfgl~~  256 (380)
                                   .-+    .+|.. .....++|+|+.+.||+++++      +.+.++||..+.
T Consensus       215 ~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~  279 (401)
T 3f2s_A          215 IKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred             hhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence                         112    22221 124568999999999999876      789999998764


No 282
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=95.32  E-value=0.016  Score=35.16  Aligned_cols=26  Identities=19%  Similarity=0.148  Sum_probs=10.8

Q ss_pred             EEehhhHHHHHHHHHHHHHHHHHHhh
Q 047245           44 IILSIALGVVTGLIGAILFACFVRCF   69 (380)
Q Consensus        44 ~~~~~~~~~~~~l~~~~~~~~~~~~~   69 (380)
                      |..+++.|+++++++++++++++|++
T Consensus        13 IA~gVVgGv~~~~ii~~~~~~~~RRr   38 (44)
T 2ks1_B           13 IATGMVGALLLLLVVALGIGLFMRRR   38 (44)
T ss_dssp             STHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEeehhHHHHHHHHHHHHHHHHhhhh
Confidence            33334444444444443444444443


No 283
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.24  E-value=0.16  Score=47.67  Aligned_cols=30  Identities=17%  Similarity=0.357  Sum_probs=26.3

Q ss_pred             CCCeEecCCCCCcEEeCCCCceEEeccCCcc
Q 047245          226 NPQILHYNLKPTNVMLDAEFTPRLADFGLAK  256 (380)
Q Consensus       226 ~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~  256 (380)
                      ...++|+|+.+.||+ ++++.+.++||..+.
T Consensus       261 ~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~  290 (424)
T 3mes_A          261 SLVFAHNDLQENNLL-QTQNNIRMIDYEYSA  290 (424)
T ss_dssp             CEEEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred             CceEECCCCCcccee-cCCCcEEEEecccCC
Confidence            356899999999999 788899999998875


No 284
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=94.94  E-value=0.02  Score=34.57  Aligned_cols=26  Identities=15%  Similarity=0.384  Sum_probs=12.7

Q ss_pred             EEehhhHHHHHHHHHHHHHHHHHHhh
Q 047245           44 IILSIALGVVTGLIGAILFACFVRCF   69 (380)
Q Consensus        44 ~~~~~~~~~~~~l~~~~~~~~~~~~~   69 (380)
                      .+.+.++|++++++++++++++.||+
T Consensus        13 ~Ia~~vVGvll~vi~~l~~~~~~RRR   38 (44)
T 2jwa_A           13 SIISAVVGILLVVVLGVVFGILIKRR   38 (44)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhheehh
Confidence            35556666544444444444444444


No 285
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=94.30  E-value=0.027  Score=34.02  Aligned_cols=19  Identities=32%  Similarity=0.441  Sum_probs=7.2

Q ss_pred             HHHHHHHHHHHHHHHHHhh
Q 047245           51 GVVTGLIGAILFACFVRCF   69 (380)
Q Consensus        51 ~~~~~l~~~~~~~~~~~~~   69 (380)
                      |++++++++++.++++|++
T Consensus        19 Gv~~v~ii~~~~~~~~RRR   37 (44)
T 2l2t_A           19 GLFILVIVGLTFAVYVRRK   37 (44)
T ss_dssp             HHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHhhhh
Confidence            3333333333334444443


No 286
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=92.88  E-value=0.054  Score=31.72  Aligned_cols=22  Identities=18%  Similarity=0.329  Sum_probs=11.7

Q ss_pred             EEehhhHHHHHHHHHHHHHHHH
Q 047245           44 IILSIALGVVTGLIGAILFACF   65 (380)
Q Consensus        44 ~~~~~~~~~~~~l~~~~~~~~~   65 (380)
                      .+.++++|+++++++++.+.++
T Consensus        12 aIAGiVvG~v~gv~li~~l~~~   33 (38)
T 2k1k_A           12 EIVAVIFGLLLGAALLLGILVF   33 (38)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceeeeehHHHHHHHHHHHHHHH
Confidence            4556777766655444443333


No 287
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=91.38  E-value=0.61  Score=39.13  Aligned_cols=118  Identities=9%  Similarity=0.135  Sum_probs=79.9

Q ss_pred             CCCCcceeeEEEecCCeEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHhHhcCCCCeEecCCCCCc
Q 047245          159 RHRNLMSLRAYVPESSRFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTN  238 (380)
Q Consensus       159 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH~dlk~~N  238 (380)
                      .||+.+.. .+-.+.+.+.+.|+.-++  ..+|-.     -...+...+++++..++....+++     .-+|--|.|+|
T Consensus        43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~--~~~f~~-----ik~~~~~eKlr~l~ni~~l~~~~~-----~r~tf~L~P~N  109 (215)
T 4ann_A           43 HSPYFIDA-ELTELRDSFQIHYDINDN--HTPFDN-----IKSFTKNEKLRYLLNIKNLEEVNR-----TRYTFVLAPDE  109 (215)
T ss_dssp             CCTTBCCE-EEEECSSEEEEEECCCTT--SEEGGG-----GGGSCHHHHHHHHHHGGGGGGGGG-----SSEECCCSGGG
T ss_pred             cCCcccce-EEEEcccEEEEEEEcCcc--cCCHHH-----HHhcCHHHHHHHHHHHHHHHHHhc-----CceEEEEecce
Confidence            57888866 455666677777765442  222211     235778889999999988765554     34677899999


Q ss_pred             EEeCCCCceEEeccCCcccCCCCCcCCCcccCcccccCCCCCCcchhhHHHHHHHHHHhCCCCCCch
Q 047245          239 VMLDAEFTPRLADFGLAKLMPGSLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPF  305 (380)
Q Consensus       239 ill~~~~~~kl~Dfgl~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~s~Gvil~el~tg~~p~~~~  305 (380)
                      ++++.++.+++.-.|+...           ++|.     ..+...=.-.+=+++..+++++..|+..
T Consensus       110 L~f~~~~~p~i~~RGik~~-----------l~P~-----~~~ee~fL~qyKAliiall~~K~~Fe~l  160 (215)
T 4ann_A          110 LFFTRDGLPIAKTRGLQNV-----------VDPL-----PVSEAEFLTRYKALVICAFNEKQSFDAL  160 (215)
T ss_dssp             EEECTTSCEEESCCEETTT-----------BSCC-----CCCHHHHHHHHHHHHHHHHCTTCCHHHH
T ss_pred             EEEcCCCCEEEEEccCccC-----------CCCC-----CCCHHHHHHHHHHHHHHHHcCCCCHHHH
Confidence            9999999999987776443           2232     1122222345788999999999988754


No 288
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=90.77  E-value=2.2  Score=35.87  Aligned_cols=118  Identities=13%  Similarity=0.172  Sum_probs=80.2

Q ss_pred             CCCCcceeeEEEecCCeEEEEEeecCCCCHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHH-HhHhcCCCCeEecCCCCC
Q 047245          159 RHRNLMSLRAYVPESSRFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQ-YLHFTCNPQILHYNLKPT  237 (380)
Q Consensus       159 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~-~LH~~~~~~iiH~dlk~~  237 (380)
                      .||+.  -...-.+.+.+.+.|+.-+++.=.+.++       ..+...+++++..++.... ++     ..-+|--|.|+
T Consensus        48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~-------~~~~~eKlrll~nl~~L~~~~~-----~~r~tf~l~P~  113 (219)
T 4ano_A           48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR-------KTTLLSRIRAAIHLVSKVKHHS-----ARRLIFIVCPE  113 (219)
T ss_dssp             SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH-------TSCHHHHHHHHHHHHHHHSSCC-----SSSEECCCCGG
T ss_pred             cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH-------hcCHHHHHHHHHHHHHHHHHhh-----hCceeEEEeCc
Confidence            57777  3444467778888888665543333333       4777889999988877544 33     45577789999


Q ss_pred             cEEeCCCCceEEeccCCcccCCCCCcCCCcccCcccccCCCCCCcchh-hHHHHHHHHHHhCCCCCCchhh
Q 047245          238 NVMLDAEFTPRLADFGLAKLMPGSLIATSAYSAPECFQNRSYTDKSDI-FSFGMILAVLLTGRDPTAPFFA  307 (380)
Q Consensus       238 Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv-~s~Gvil~el~tg~~p~~~~~~  307 (380)
                      |+++|.++.+++.-.|+-..           ++|..+     + ..|. -.+=+++..++.++..|+....
T Consensus       114 NL~f~~~~~p~i~hRGi~~~-----------lpP~e~-----~-ee~fl~qyKali~all~~K~~Fe~l~~  167 (219)
T 4ano_A          114 NLMFNRALEPFFLHVGVKES-----------LPPDEW-----D-DERLLREVKATVLALTEGEYRFDEYLK  167 (219)
T ss_dssp             GEEECTTCCEEESCCEETTT-----------BSSCSC-----C-HHHHHHHHHHHHHHHTTCSSCHHHHHH
T ss_pred             eEEEeCCCcEEEEEcCCccc-----------CCCCCC-----C-HHHHHHHHHHHHHHHHcCCCCHHHHHh
Confidence            99999999999997776543           233221     1 2233 3577888899999888765433


No 289
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=86.31  E-value=0.089  Score=50.14  Aligned_cols=61  Identities=5%  Similarity=-0.037  Sum_probs=16.6

Q ss_pred             ccccCccCCeeEEEEEecC-CcEEEE------EEeeeccCCChhhhcHHHHHHHHHHHHHHHcCCCCCcceeeEEEe
Q 047245          102 NRLLGSSPDGKYYRTVLDN-GLTVAV------RRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVP  171 (380)
Q Consensus       102 ~~~lg~G~~g~vy~~~~~~-g~~vav------K~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~  171 (380)
                      .+.||   ||.||+|.+.. ..+|||      |..+..      ....+....|.+|..+++.++|||+++.+++..
T Consensus       147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~------~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~  214 (463)
T 3cxl_A          147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQD------GVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV  214 (463)
T ss_dssp             TTTSS---BCCC---------CCBGGGC-----------------------------------------CBCCCEEE
T ss_pred             cccCC---chhhhcccccccCCchhhhhccCccccccc------cccccccccccccccccccccccccCCCcceEE
Confidence            34565   99999999854 367888      655431      112233467888999999999999999988753


No 290
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=76.66  E-value=1.3  Score=41.03  Aligned_cols=30  Identities=20%  Similarity=0.306  Sum_probs=24.9

Q ss_pred             CeEecCCCCCcEEe------CCCCceEEeccCCccc
Q 047245          228 QILHYNLKPTNVML------DAEFTPRLADFGLAKL  257 (380)
Q Consensus       228 ~iiH~dlk~~Nill------~~~~~~kl~Dfgl~~~  257 (380)
                      .++|+|+.+.|||+      +++..+.++||-.+..
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            35799999999999      4567799999988753


No 291
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=76.06  E-value=3.6  Score=24.73  Aligned_cols=31  Identities=26%  Similarity=0.133  Sum_probs=19.8

Q ss_pred             EehhhHHHHHHHHHHHHHH-HHHHhhhcccCC
Q 047245           45 ILSIALGVVTGLIGAILFA-CFVRCFVGYMNQ   75 (380)
Q Consensus        45 ~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~   75 (380)
                      ..+|+.|++.++++++++. .++...+++..+
T Consensus        10 ~~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~~   41 (44)
T 2ks1_B           10 IPSIATGMVGALLLLLVVALGIGLFMRRRHIV   41 (44)
T ss_dssp             SSSSTHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred             cceEEeehhHHHHHHHHHHHHHHHHhhhhHhh
Confidence            5778888888776665554 445555555443


No 292
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=74.57  E-value=5.3  Score=23.98  Aligned_cols=29  Identities=24%  Similarity=0.257  Sum_probs=17.9

Q ss_pred             hhhHHHHHHHHHHHHH-HHHHHhhhcccCC
Q 047245           47 SIALGVVTGLIGAILF-ACFVRCFVGYMNQ   75 (380)
Q Consensus        47 ~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~   75 (380)
                      +|+.|++.++++++++ ..++...+++..+
T Consensus        11 aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~   40 (44)
T 2l2t_A           11 LIAAGVIGGLFILVIVGLTFAVYVRRKSIK   40 (44)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred             eEEEeehHHHHHHHHHHHHHHHHhhhhhhh
Confidence            5788888877665554 4455555555443


No 293
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=67.10  E-value=0.97  Score=25.66  Aligned_cols=7  Identities=0%  Similarity=0.244  Sum_probs=2.8

Q ss_pred             HHHHHHh
Q 047245           62 FACFVRC   68 (380)
Q Consensus        62 ~~~~~~~   68 (380)
                      +.++.||
T Consensus        27 ~~~~iRR   33 (35)
T 1iij_A           27 VGILIKR   33 (35)
T ss_dssp             TTHHHHH
T ss_pred             hheEEee
Confidence            3344443


No 294
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=65.00  E-value=0.26  Score=47.20  Aligned_cols=29  Identities=17%  Similarity=0.133  Sum_probs=25.2

Q ss_pred             HHHHHHHHHHHHcCCCCCcceeeEEEecC
Q 047245          145 KRRIQQELEVLASLRHRNLMSLRAYVPES  173 (380)
Q Consensus       145 ~~~~~~E~~~l~~l~h~niv~l~~~~~~~  173 (380)
                      .++|..|++.+.+++|+|+|+++|||...
T Consensus       323 ~~eF~~Eve~L~~i~HrNLV~L~gyC~s~  351 (487)
T 3oja_A          323 SETERLECERENQARQREIDALKEQYRTV  351 (487)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             HHHHHHHHHHHhcccccchhhHHHHhcCh
Confidence            46899999999999999999999999764


No 295
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=64.22  E-value=11  Score=22.60  Aligned_cols=31  Identities=23%  Similarity=0.105  Sum_probs=16.6

Q ss_pred             EehhhHHHHHHHHHHHHHHHHHHhhhcccCC
Q 047245           45 ILSIALGVVTGLIGAILFACFVRCFVGYMNQ   75 (380)
Q Consensus        45 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   75 (380)
                      .-+++.+++.+++++++.+.+....++++.+
T Consensus        11 ~~~Ia~~vVGvll~vi~~l~~~~~~RRR~~~   41 (44)
T 2jwa_A           11 LTSIISAVVGILLVVVLGVVFGILIKRRQQK   41 (44)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCSC
T ss_pred             ccchHHHHHHHHHHHHHHHHHHhheehhhhh
Confidence            3445556666443334445556666666544


No 296
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=54.31  E-value=9.3  Score=26.23  Aligned_cols=12  Identities=25%  Similarity=0.537  Sum_probs=5.7

Q ss_pred             ehhhHHHHHHHH
Q 047245           46 LSIALGVVTGLI   57 (380)
Q Consensus        46 ~~~~~~~~~~l~   57 (380)
                      .++++|++++++
T Consensus        11 ~~Iv~gvi~gil   22 (79)
T 2knc_B           11 LVVLLSVMGAIL   22 (79)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHH
Confidence            345555554443


No 297
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=53.09  E-value=7.9  Score=21.61  Aligned_cols=21  Identities=19%  Similarity=0.210  Sum_probs=10.3

Q ss_pred             EehhhHHHHHHHHHHHHHHHH
Q 047245           45 ILSIALGVVTGLIGAILFACF   65 (380)
Q Consensus        45 ~~~~~~~~~~~l~~~~~~~~~   65 (380)
                      +.++++|.+.+++++++.+++
T Consensus         9 IaGIVvgdi~~t~~i~~~vy~   29 (33)
T 2l34_A            9 LAGIVVGDLVLTVLIALAVYF   29 (33)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEeEeHHHHHHHHHHHHHHhh
Confidence            345556655555444444443


No 298
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=49.46  E-value=37  Score=21.26  Aligned_cols=9  Identities=33%  Similarity=0.645  Sum_probs=3.5

Q ss_pred             hHHHHHHHH
Q 047245           49 ALGVVTGLI   57 (380)
Q Consensus        49 ~~~~~~~l~   57 (380)
                      +++++++++
T Consensus        13 i~svl~GLL   21 (54)
T 2l8s_A           13 LLSAFAGLL   21 (54)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            334444433


No 299
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=46.98  E-value=17  Score=22.74  Aligned_cols=20  Identities=20%  Similarity=0.278  Sum_probs=8.9

Q ss_pred             eEEehhhH-HHHHHHHHHHHH
Q 047245           43 KIILSIAL-GVVTGLIGAILF   62 (380)
Q Consensus        43 ~~~~~~~~-~~~~~l~~~~~~   62 (380)
                      ++++..++ |+++++++.+++
T Consensus        10 WiIi~svl~GLLLL~Lii~~L   30 (54)
T 2l8s_A           10 WVILLSAFAGLLLLMLLILAL   30 (54)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHH
Confidence            44444444 544444443333


No 300
>1afo_A Glycophorin A; integral membrane protein, transmembrane helix interactions, membrane protein folding; NMR {Homo sapiens} SCOP: j.35.1.1 PDB: 2kpf_A
Probab=45.72  E-value=22  Score=20.40  Aligned_cols=22  Identities=41%  Similarity=0.747  Sum_probs=12.8

Q ss_pred             EEehhhHHHHHHHHHHHHHHHH
Q 047245           44 IILSIALGVVTGLIGAILFACF   65 (380)
Q Consensus        44 ~~~~~~~~~~~~l~~~~~~~~~   65 (380)
                      .++.+++|+..++++.+++..+
T Consensus        11 ~i~lII~~vmaGiIG~IllI~y   32 (40)
T 1afo_A           11 EITLIIFGVMAGVIGTILLISY   32 (40)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHH
Confidence            3455666777776665554433


No 301
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=40.99  E-value=36  Score=21.32  Aligned_cols=7  Identities=57%  Similarity=1.099  Sum_probs=2.6

Q ss_pred             HHHHHHH
Q 047245           50 LGVVTGL   56 (380)
Q Consensus        50 ~~~~~~l   56 (380)
                      ++++.++
T Consensus        17 ~svl~GL   23 (54)
T 2knc_A           17 VGVLGGL   23 (54)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            3333333


No 302
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=39.81  E-value=32  Score=22.45  Aligned_cols=9  Identities=67%  Similarity=0.962  Sum_probs=3.9

Q ss_pred             hhHHHHHHH
Q 047245           48 IALGVVTGL   56 (380)
Q Consensus        48 ~~~~~~~~l   56 (380)
                      +++|.++++
T Consensus        12 ivlGg~~~l   20 (70)
T 2klu_A           12 IVLGGVAGL   20 (70)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHhHHHHH
Confidence            444444443


No 303
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=38.76  E-value=46  Score=19.65  Aligned_cols=11  Identities=36%  Similarity=0.709  Sum_probs=4.7

Q ss_pred             hhHHHHHHHHH
Q 047245           48 IALGVVTGLIG   58 (380)
Q Consensus        48 ~~~~~~~~l~~   58 (380)
                      ++++++.++++
T Consensus        13 Ii~s~l~GLll   23 (42)
T 2k1a_A           13 VLVGVLGGLLL   23 (42)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            34444444443


No 304
>2k21_A Potassium voltage-gated channel subfamily E member; KCNE1, membrane protein, potassium channel, MINK, auxilliary subunit, micelles, ION transport; NMR {Homo sapiens}
Probab=37.70  E-value=36  Score=25.45  Aligned_cols=26  Identities=12%  Similarity=0.111  Sum_probs=12.3

Q ss_pred             EEehhhHHHHHHHHHHHHHHHHHHhh
Q 047245           44 IILSIALGVVTGLIGAILFACFVRCF   69 (380)
Q Consensus        44 ~~~~~~~~~~~~l~~~~~~~~~~~~~   69 (380)
                      +-|.++++...++++++++.+.+-++
T Consensus        54 lYIL~vmgffgff~~GImLsYiRSKk   79 (138)
T 2k21_A           54 LYVLMVLGFFGFFTLGIMLSYIRSKK   79 (138)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ehHHHHHHHHHHHHHHHHHHHhHhhh
Confidence            33444445555555555554444333


No 305
>2k9j_B Integrin beta-3; transmembrane complex, cell adhesion, cleavage on basic residues, disease mutation, glycoprotein, pyrrolidone carboxylic acid; NMR {Homo sapiens} PDB: 2rmz_A 2rn0_A 2l91_A
Probab=33.71  E-value=33  Score=20.33  Aligned_cols=12  Identities=25%  Similarity=0.537  Sum_probs=5.7

Q ss_pred             ehhhHHHHHHHH
Q 047245           46 LSIALGVVTGLI   57 (380)
Q Consensus        46 ~~~~~~~~~~l~   57 (380)
                      .++++|++++++
T Consensus        10 ~~Iv~gvi~~iv   21 (43)
T 2k9j_B           10 LVVLLSVMGAIL   21 (43)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             eehHHHHHHHHH
Confidence            345555554433


No 306
>2jo1_A Phospholemman; FXYD1, Na,K-ATPase, micelle, hydrolase regulator; NMR {Homo sapiens}
Probab=33.42  E-value=59  Score=21.44  Aligned_cols=13  Identities=8%  Similarity=0.291  Sum_probs=5.4

Q ss_pred             hhhHHHHHHHHHH
Q 047245           47 SIALGVVTGLIGA   59 (380)
Q Consensus        47 ~~~~~~~~~l~~~   59 (380)
                      +++++++++++++
T Consensus        20 GLifA~vLfi~GI   32 (72)
T 2jo1_A           20 GLVIAGILFILGI   32 (72)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHH
Confidence            3444444444433


No 307
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=28.07  E-value=29  Score=23.75  Aligned_cols=17  Identities=12%  Similarity=0.096  Sum_probs=9.0

Q ss_pred             eeEEehhhHHHHHHHHH
Q 047245           42 KKIILSIALGVVTGLIG   58 (380)
Q Consensus        42 ~~~~~~~~~~~~~~l~~   58 (380)
                      ..+++++++|++++-++
T Consensus        11 ~~Iv~gvi~gilliGll   27 (79)
T 2knc_B           11 LVVLLSVMGAILLIGLA   27 (79)
T ss_dssp             HHHHHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHH
Confidence            44556666665544333


No 308
>2jp3_A FXYD domain-containing ION transport regulator 4; protein, transcription; NMR {Rattus norvegicus}
Probab=26.29  E-value=49  Score=21.62  Aligned_cols=12  Identities=17%  Similarity=0.412  Sum_probs=4.9

Q ss_pred             hhhHHHHHHHHH
Q 047245           47 SIALGVVTGLIG   58 (380)
Q Consensus        47 ~~~~~~~~~l~~   58 (380)
                      ++++++++++++
T Consensus        21 GLifA~vLfi~G   32 (67)
T 2jp3_A           21 GLIFGGLLCIAG   32 (67)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             chhhHHHHHHHH
Confidence            344444444333


No 309
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=25.40  E-value=43  Score=33.29  Aligned_cols=45  Identities=20%  Similarity=0.097  Sum_probs=33.6

Q ss_pred             HHHHHHHHHHH--HHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcc
Q 047245          205 EVRLRIAVGVI--KGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAK  256 (380)
Q Consensus       205 ~~~~~i~~~ia--~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~  256 (380)
                      ..+..++.++|  ..+.|+=   .    -||=.++|||++.+|++.=+|||...
T Consensus       529 ~ar~nF~~SlA~~Svv~YIL---G----lGDRH~~NILid~tG~v~HIDFG~~f  575 (696)
T 2x6h_A          529 EVMDTYIKSCAGYCVITYLL---G----VGDRHLDNLLLTTNGKLFHIDFGYIL  575 (696)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH---T----CCCCCTTTEEECTTSCEEECCCCSCT
T ss_pred             HHHHHHHHHHHHHHHHHHHc---c----CCCCCCcceEEeCCCCEEEEeehhhh
Confidence            34566666665  3455664   3    35888999999999999999999874


No 310
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=24.49  E-value=24  Score=36.27  Aligned_cols=17  Identities=41%  Similarity=0.301  Sum_probs=0.0

Q ss_pred             EehhhHHHHHHHHHHHH
Q 047245           45 ILSIALGVVTGLIGAIL   61 (380)
Q Consensus        45 ~~~~~~~~~~~l~~~~~   61 (380)
                      +++|++|++++++++++
T Consensus       707 ii~il~~~~~ll~~~ll  723 (880)
T 1q55_A          707 ILVILGSVLALLILFLL  723 (880)
T ss_dssp             -----------------
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            44455555444443333


No 311
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=22.80  E-value=5.3e+02  Score=25.03  Aligned_cols=47  Identities=17%  Similarity=0.056  Sum_probs=35.6

Q ss_pred             CHHHHHHHHHHHH--HHHHHhHhcCCCCeEecCCCCCcEEeCCCCceEEeccCCcc
Q 047245          203 GWEVRLRIAVGVI--KGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAK  256 (380)
Q Consensus       203 ~~~~~~~i~~~ia--~~l~~LH~~~~~~iiH~dlk~~Nill~~~~~~kl~Dfgl~~  256 (380)
                      .|..+..++.+.|  ..+.|+=   ..    ||=.++|||++.+|++.=+|||...
T Consensus       453 ~~~a~~nF~~S~A~ySvv~YIL---Gi----gDRH~~NILld~tG~v~HIDFG~~f  501 (614)
T 3ls8_A          453 SAEVMDTYVKSCAGYCVITYIL---GV----GDRHLDNLLLTKTGKLFHIDFGYIL  501 (614)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHH---TC----CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred             cHHHHHHHHHHHHHHhHhheee---ec----cCCCCcceeEcCCCCEeeeehHHhh
Confidence            4566677777665  3466665   33    4778999999999999999999874


No 312
>1pi7_A VPU protein, U ORF protein; alpha helix, viral protein; NMR {Human immunodeficiency virus 1} SCOP: j.35.1.1 PDB: 1pi8_A 1pje_A 2gof_A 2goh_A 2jpx_A
Probab=20.56  E-value=97  Score=17.55  Aligned_cols=11  Identities=36%  Similarity=0.495  Sum_probs=4.1

Q ss_pred             HHHHHHHHHHH
Q 047245           52 VVTGLIGAILF   62 (380)
Q Consensus        52 ~~~~l~~~~~~   62 (380)
                      .++++++++++
T Consensus        11 livalIiaIVV   21 (36)
T 1pi7_A           11 LVVAIIIAIVV   21 (36)
T ss_pred             HHHHHHHHHHH
Confidence            33333333333


Done!