Citrus Sinensis ID: 047245


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380
MGSKTSTMLLLLMIFWFQYTTVQCQEKMNPNSKPTEFKNGVKKIILSIALGVVTGLIGAILFACFVRCFVGYMNQTPIIKGPVIFSPKIDPKTLQAALANENRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMPGSLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLHSF
cccccccccEEEEEcccccccccccccccccccccccccccEEEEEEHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHcccccccccccccCEEEEEEccccEEEEEEcccccccccccccHHHHHHHHHHHHHHHcccccccccEEEEEEcccCEEEEEcccccccHHHHHcccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccHHHHHHHHHccccccccccccccccccHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHcccccccccccHHHHHHHHcccccc
*****STMLLLLMIFWFQYTTVQCQ**************GVKKIILSIALGVVTGLIGAILFACFVRCFVGY*N*****KGPVIFSPKIDPKTLQAALANENRLLGSSPDGKYYRTVLDNGLTVAVRRVE******************QQELEVLASLRHRNLMSLRAYVPESSRFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMPGSLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLHS*
xxxxxxHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SSSSSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MGSKTSTMLLLLMIFWFQYTTVQCQEKMNPNSKPTEFKNGVKKIILSIALGVVTGLIGAILFACFVRCFVGYMNQTPIIKGPVIFSPKIDPKTLQAALANENRLLGSSPDGKYYRTVLDNGLTVAVRRVEAFESGSPEKQNKSVKRRIQQELEVLASLRHRNLMSLRAYVPESSRFYLVYDYLQTGSLEDAMDRIRENQLQLGWEVRLRIAVGVIKGLQYLHFTCNPQILHYNLKPTNVMLDAEFTPRLADFGLAKLMPGSLIATSAYSAPECFQNRSYTDKSDIFSFGMILAVLLTGRDPTAPFFAEAASGGSLGRWLRHLQHAGEAREALDRSILGEEVEEDEMLMAVRIAVVCLSDSPADRPSSDELVPMLTQLHSF

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Inactive leucine-rich repeat receptor-like protein kinase CORYNE Involved in the perception of CLV3 peptide that acts as a mobile signal regulating meristems maintenance. Modulates root, shoot and flower apical meristems maintenance and floral organ development regulation, probably via CLAVATA (CLV)-like pathways involving at least CLV3 and CLE19.probableQ9LYU7

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3UIM, chain A
Confidence level:very confident
Coverage over the Query: 88-131,144-377
View the alignment between query and template
View the model in PyMOL
Template: 2KS1, chain B
Confidence level:probable
Coverage over the Query: 44-69
View the alignment between query and template
View the model in PyMOL