Query 047246
Match_columns 252
No_of_seqs 117 out of 124
Neff 3.2
Searched_HMMs 13730
Date Mon Mar 25 16:00:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047246.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/047246hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2bo4a1 c.68.1.18 (A:2-382) Ma 57.1 3.7 0.00027 36.0 3.7 127 81-233 90-241 (381)
2 d1omza_ c.68.1.15 (A:) Alpha-1 26.6 10 0.00075 26.5 1.1 35 80-114 79-113 (265)
3 d1xhba2 c.68.1.17 (A:95-422) P 22.5 21 0.0015 27.9 2.4 39 81-119 106-144 (328)
4 d1qh5a_ d.157.1.2 (A:) Glyoxal 22.4 27 0.0019 28.1 3.1 35 81-116 11-49 (260)
5 d2qeda1 d.157.1.2 (A:1-251) Gl 19.8 37 0.0027 27.0 3.4 36 80-116 10-48 (251)
6 d1qg8a_ c.68.1.1 (A:) Spore co 17.0 35 0.0025 25.2 2.5 30 81-110 87-116 (255)
7 d1lbua2 d.65.1.1 (A:84-213) Zn 16.9 44 0.0032 24.5 3.0 35 92-126 78-113 (130)
8 d2q78a1 d.38.1.7 (A:1-130) Unc 16.3 24 0.0018 26.4 1.4 46 88-133 23-71 (130)
9 d1s4na_ c.68.1.16 (A:) Glycoli 16.0 45 0.0033 28.7 3.3 40 69-112 123-166 (339)
10 d1r9ca_ d.32.1.2 (A:) Fosfomyc 15.9 62 0.0045 21.4 3.4 41 95-137 74-114 (130)
No 1
>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]}
Probab=57.11 E-value=3.7 Score=36.05 Aligned_cols=127 Identities=9% Similarity=0.062 Sum_probs=77.1
Q ss_pred ccceEEEeeccccc-cCCCChHHHHHHHHHhCCcccCCCcCCC--CCceeeeeeeeccCcccceeeccccCCCCCCCCCC
Q 047246 81 AEYNYIFLWDEDIG-VAIFNPRQYLSIVKDEGLEISQPALDPF--KSEVHHLITARRRNSKAHRRIYKFKASGRCDDYST 157 (252)
Q Consensus 81 ~~YdYiFlwDeDl~-vd~f~~~ryl~Ivk~~gLeISQPALd~~--~s~~~h~iT~R~~~~~vHr~~~~~~~~~~c~~~~~ 157 (252)
+..|+|.+.|-|+. .+.-.+.+++..++ +|-++.-|..... .|.+++.+. | + -+ +..+ +..|...-.
T Consensus 90 a~gd~lvflDADl~~~~pe~i~~L~~~i~-~g~d~V~g~y~R~~~~grvt~~l~-~-p--ll-~~l~----~~~~~~~i~ 159 (381)
T d2bo4a1 90 TQWERIHFYDADITSFGPDWITKAEEAAD-FGYGLVRHYFPRASTDAMITWMIT-R-T--GF-ALLW----PHTELSWIE 159 (381)
T ss_dssp CCCSEEEECCTTCSSCCHHHHHHHHHHHH-TTCSEEEEECCCCTTSCHHHHHTH-H-H--HH-HHHC----TTSSGGGCS
T ss_pred CCCCEEEEEcCCcCcCCHHHHHHHHHHHh-hhcCeEEEeeccccCCCceehHhh-H-H--HH-HHHh----hhhcccccc
Confidence 68999999999995 56666888888874 6777776643322 133332111 0 0 00 0111 111111222
Q ss_pred CCCcceeEeeeccccchhHHHhhhhcccccCCcccCCCCCCccccccccchhhHHH----------------------HH
Q 047246 158 APPCIGWVEMMAPVFSKAAWRCRRSRFCLQSSYCSDFVNDLIHTCGLDVQLRYCAQ----------------------VR 215 (252)
Q Consensus 158 ~ppctgfVEvMAPVFSR~AWrCvw~~f~~~s~~~~miQNDLvhGWGLD~~~~~Ca~----------------------vr 215 (252)
.|=| |+. .|+|++-+++...- -+..+ .|||+|.-+-.-|. |+
T Consensus 160 dPl~-G~~-----a~~R~~~~~L~~~~--------~v~~~--~~~G~Di~lt~~A~~~G~rI~EV~i~~~~l~~~f~~v~ 223 (381)
T d2bo4a1 160 QPLG-GEL-----LMRREVAAMLYEDE--------RVRRR--SDWGIDTLYTFVTVQQGVSIYECYIPEGKAHRLYGGLD 223 (381)
T ss_dssp CTTC-CCE-----EEEHHHHHHHHHCH--------HHHTC--CSTTHHHHHHHHHHHTTCCEEEEECTTCCCCCCSCCGG
T ss_pred cCCc-ccc-----eeeHHHHHHhhhhc--------ccccc--CCcccchHHHHHHHHcCCeEEecCCCHHHHHHHHHHHH
Confidence 3333 343 79999988876511 01112 69999998877775 77
Q ss_pred HhhHHHHHHHHHHHhhhh
Q 047246 216 RQSYIKMQISRNRWKHSV 233 (252)
Q Consensus 216 ~~~~~e~~~f~~Rw~~a~ 233 (252)
.--+..|..|...|+..-
T Consensus 224 ~~~f~l~~~~~~~W~~~~ 241 (381)
T d2bo4a1 224 DLRTMLVECFAAIQSLQH 241 (381)
T ss_dssp GGHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHheecc
Confidence 778889999999998543
No 2
>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=26.63 E-value=10 Score=26.46 Aligned_cols=35 Identities=20% Similarity=0.116 Sum_probs=24.5
Q ss_pred cccceEEEeeccccccCCCChHHHHHHHHHhCCcc
Q 047246 80 VAEYNYIFLWDEDIGVAIFNPRQYLSIVKDEGLEI 114 (252)
Q Consensus 80 V~~YdYiFlwDeDl~vd~f~~~ryl~Ivk~~gLeI 114 (252)
.+.-|||.+.|+|.-++.-.+++.++.+.+++-.+
T Consensus 79 ~a~ge~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~ 113 (265)
T d1omza_ 79 EVETNAVLMVDDDTLISAQDLVFAFSIWQQFPDQI 113 (265)
T ss_dssp TCCSSEEEEECTTEEECHHHHHHHHHHHTTSTTSE
T ss_pred hCCcCEEEEeCcccCCCHHHHHHHHHHHHhCCCcc
Confidence 35779999999998876655666666665554433
No 3
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=22.48 E-value=21 Score=27.93 Aligned_cols=39 Identities=13% Similarity=0.091 Sum_probs=33.6
Q ss_pred ccceEEEeeccccccCCCChHHHHHHHHHhCCcccCCCc
Q 047246 81 AEYNYIFLWDEDIGVAIFNPRQYLSIVKDEGLEISQPAL 119 (252)
Q Consensus 81 ~~YdYiFlwDeDl~vd~f~~~ryl~Ivk~~gLeISQPAL 119 (252)
+.-|||++.|.|..++.--.++.++.+.+.+-.+..|.+
T Consensus 106 a~gd~i~flD~D~~~~p~~l~~l~~~~~~~~~~~v~~~~ 144 (328)
T d1xhba2 106 SRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPII 144 (328)
T ss_dssp CCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEE
T ss_pred hhcceeeecCcccccChhHHHHHHHHHhcCCCeEEecce
Confidence 677999999999999988899999988888877777664
No 4
>d1qh5a_ d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathione hydrolase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.41 E-value=27 Score=28.13 Aligned_cols=35 Identities=17% Similarity=0.475 Sum_probs=26.8
Q ss_pred ccceEEEeeccc----cccCCCChHHHHHHHHHhCCcccC
Q 047246 81 AEYNYIFLWDED----IGVAIFNPRQYLSIVKDEGLEISQ 116 (252)
Q Consensus 81 ~~YdYiFlwDeD----l~vd~f~~~ryl~Ivk~~gLeISQ 116 (252)
..|-|++ .|++ +.||..++++++++++++|++|..
T Consensus 11 DNy~Yli-~d~~t~~a~vIDP~~~~~i~~~l~~~~~~l~~ 49 (260)
T d1qh5a_ 11 DNYMYLV-IDDETKEAAIVDPVQPQKVVDAARKHGVKLTT 49 (260)
T ss_dssp TEEEEEE-EETTTTEEEEESCSSHHHHHHHHHHHTCEEEE
T ss_pred ceEEEEE-EECCCCEEEEEeCCCCHHHHHHHHHCCCeEEE
Confidence 4455543 4544 788999999999999999998763
No 5
>d2qeda1 d.157.1.2 (A:1-251) Glyoxalase II (hydroxyacylglutathione hydrolase) {Salmonella typhimurium [TaxId: 90371]}
Probab=19.83 E-value=37 Score=26.99 Aligned_cols=36 Identities=8% Similarity=0.125 Sum_probs=26.7
Q ss_pred cccceEEEeeccc---cccCCCChHHHHHHHHHhCCcccC
Q 047246 80 VAEYNYIFLWDED---IGVAIFNPRQYLSIVKDEGLEISQ 116 (252)
Q Consensus 80 V~~YdYiFlwDeD---l~vd~f~~~ryl~Ivk~~gLeISQ 116 (252)
-+.|-|++ .|+. +.||.-+++++++.++++|+.|..
T Consensus 10 ~DNy~YLi-~~~~~~avvIDPg~~~~il~~i~~~~~~l~~ 48 (251)
T d2qeda1 10 QDNYIWVL-TNDEGRCVIVDPGEAAPVLKAIAEHKWMPEA 48 (251)
T ss_dssp TTEEEEEE-ECTTSEEEEECCSCHHHHHHHHHHHTCEEEE
T ss_pred cCeEEEEE-EeCCCeEEEEcCCccHHHHHHHHHcCCceeE
Confidence 34555544 4443 678999999999999999998743
No 6
>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]}
Probab=17.02 E-value=35 Score=25.23 Aligned_cols=30 Identities=17% Similarity=-0.011 Sum_probs=20.4
Q ss_pred ccceEEEeeccccccCCCChHHHHHHHHHh
Q 047246 81 AEYNYIFLWDEDIGVAIFNPRQYLSIVKDE 110 (252)
Q Consensus 81 ~~YdYiFlwDeDl~vd~f~~~ryl~Ivk~~ 110 (252)
+..|||+++|.|--++.--+++.++.++++
T Consensus 87 a~g~~i~~lD~Dd~~~p~~l~~~~~~~~~~ 116 (255)
T d1qg8a_ 87 AEGEYITYATDDNIYMPDRLLKMVRELDTH 116 (255)
T ss_dssp CCCSEEEEEETTEEECTTHHHHHHHHHHHC
T ss_pred cccccccccccccccccchHHHHHHHHHhC
Confidence 478999999988666544455555555543
No 7
>d1lbua2 d.65.1.1 (A:84-213) Zn2+ DD-carboxypeptidase C-terminal catalytic domain {Streptomyces albus G [TaxId: 1962]}
Probab=16.88 E-value=44 Score=24.51 Aligned_cols=35 Identities=17% Similarity=0.274 Sum_probs=25.2
Q ss_pred ccccCCCChHHHHHHHHHhCC-cccCCCcCCCCCce
Q 047246 92 DIGVAIFNPRQYLSIVKDEGL-EISQPALDPFKSEV 126 (252)
Q Consensus 92 Dl~vd~f~~~ryl~Ivk~~gL-eISQPALd~~~s~~ 126 (252)
|+.+...++.++.+++++.|+ .|-.+++.+.++.+
T Consensus 78 Di~v~g~~~~~~~~~a~~~gf~~~~g~G~~~~~~fv 113 (130)
T d1lbua2 78 DLGAGSQGFCALAQAARNHGFTEILGPGYPGHNDHT 113 (130)
T ss_dssp EECCTTTCHHHHHHHGGGTTCSEEECTTSTTCSSSE
T ss_pred EEecCCCCHHHHHHHHHHcCCCccceeeeCCCCCEE
Confidence 677888999999999999875 34445566554444
No 8
>d2q78a1 d.38.1.7 (A:1-130) Uncharacterized protein TM0581 {Thermotoga maritima [TaxId: 2336]}
Probab=16.27 E-value=24 Score=26.39 Aligned_cols=46 Identities=22% Similarity=0.254 Sum_probs=37.0
Q ss_pred eeccccccCC---CChHHHHHHHHHhCCcccCCCcCCCCCceeeeeeee
Q 047246 88 LWDEDIGVAI---FNPRQYLSIVKDEGLEISQPALDPFKSEVHHLITAR 133 (252)
Q Consensus 88 lwDeDl~vd~---f~~~ryl~Ivk~~gLeISQPALd~~~s~~~h~iT~R 133 (252)
+||||.++-+ +..-.++.+|+.-..++=||-|+++.+.+--.+.+|
T Consensus 23 ~~~ed~~~~dl~VlaTp~lia~mE~a~~~~l~~~L~~g~ttVG~~v~I~ 71 (130)
T d2q78a1 23 VWNEDIEMLDLHLVATSALIGVVHRVSYELLSRYLPNDYTAVVVETLAR 71 (130)
T ss_dssp BCCSCGGGGGGCBBCHHHHHHHHHHHHHHHHHTTSCTTEEEEEEEEEEE
T ss_pred cccCCCccccceEEchHHHHHHHHHHHHHHHHhhCCCCceEEEEEEEEE
Confidence 8999988765 557899999999999999999999755454555555
No 9
>d1s4na_ c.68.1.16 (A:) Glycolipid 2-alpha-mannosyltransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=16.02 E-value=45 Score=28.68 Aligned_cols=40 Identities=15% Similarity=0.360 Sum_probs=28.0
Q ss_pred hhhhcc-cCccccccceEEEeeccccccC---CCChHHHHHHHHHhCC
Q 047246 69 WFAKHF-LHPDIVAEYNYIFLWDEDIGVA---IFNPRQYLSIVKDEGL 112 (252)
Q Consensus 69 wfaKrf-LHPdiV~~YdYiFlwDeDl~vd---~f~~~ryl~Ivk~~gL 112 (252)
|++.-| -|| ++.+|||++=.|+|+.+. ++||- +.|++.|.
T Consensus 123 F~sg~f~~~p-~L~~YdYywRvdpD~~f~cdI~yD~F---~~M~~n~k 166 (339)
T d1s4na_ 123 YQSGFFWRHE-LLEEYDWYWRVEPDIKLYCDINYDVF---KWMQENEK 166 (339)
T ss_dssp HHHHTGGGSG-GGTTCSEEEECCTTCEECSCCCSCHH---HHHHHTTC
T ss_pred Hhhcccccch-hhhccceEEEeCCCcEEecCCCCCHH---HHHhhcCC
Confidence 444445 466 889999999999999875 35664 45555544
No 10
>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}
Probab=15.93 E-value=62 Score=21.36 Aligned_cols=41 Identities=15% Similarity=0.079 Sum_probs=25.5
Q ss_pred cCCCChHHHHHHHHHhCCcccCCCcCCCCCceeeeeeeeccCc
Q 047246 95 VAIFNPRQYLSIVKDEGLEISQPALDPFKSEVHHLITARRRNS 137 (252)
Q Consensus 95 vd~f~~~ryl~Ivk~~gLeISQPALd~~~s~~~h~iT~R~~~~ 137 (252)
|+..++++.++.+++.|++|.++...... -.+.+..+.++.
T Consensus 74 v~~~dv~~~~~~l~~~gv~i~~~~~~~~~--~~~~~~~~DPdG 114 (130)
T d1r9ca_ 74 IDDADFDRYAERVGKLGLDMRPPRPRVEG--EGRSIYFYDDDN 114 (130)
T ss_dssp CCGGGHHHHHHHHHHHTCCBCCCCC-------CCEEEEECTTS
T ss_pred ccHHHHHHHHHHHHHCCCeEecCCcccCC--CEEEEEEECCCC
Confidence 44556789999999999999887543321 123455565543
Done!