Your job contains 1 sequence.
>047247
MDITLFSPKGTHSHHFFSLSNQQLQQSNGDQIALDMQTNNNNNIQPQNSCHTSTSRSSDS
GEPCADTTGGNKWASKLLKECARAISDKDSSKIHHLLWMLNELASPYGDCDQKLASYFLQ
ALFCKATESGQRCYKTLTSVAEKSHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALD
GETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKF
ARLMGVPFEFKVITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMFQS
LKPKVVTIVEEEADLTSSRYDFVKCFEECLRFYTLYFEMLEESFVPTSNERLMLERECSR
DIVRVLACDDDNNSSNNGNGDREEEE
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 047247
(386 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2120106 - symbol:SHR "AT4G37650" species:3702 ... 875 1.4e-87 1
TAIR|locus:2164783 - symbol:PAT1 "AT5G48150" species:3702... 370 4.6e-34 1
TAIR|locus:2044973 - symbol:SCL21 "AT2G04890" species:370... 359 6.7e-33 1
TAIR|locus:2026982 - symbol:SCL1 "AT1G21450" species:3702... 358 2.7e-32 1
TAIR|locus:2008076 - symbol:SCL5 "AT1G50600" species:3702... 336 7.7e-30 1
TAIR|locus:2080345 - symbol:SCR "SCARECROW" species:3702 ... 328 8.0e-29 1
TAIR|locus:2099624 - symbol:RGL2 "RGA-like 2" species:370... 304 1.8e-26 1
TAIR|locus:2083073 - symbol:AT3G49950 "AT3G49950" species... 298 1.9e-26 1
TAIR|locus:2087994 - symbol:AT3G13840 "AT3G13840" species... 295 1.3e-25 1
TAIR|locus:2174974 - symbol:AT5G66770 "AT5G66770" species... 294 2.9e-25 1
TAIR|locus:2201557 - symbol:RGL1 "RGA-like 1" species:370... 290 4.8e-25 1
TAIR|locus:2006747 - symbol:GAI "GIBBERELLIC ACID INSENSI... 290 5.7e-25 1
TAIR|locus:2165685 - symbol:AT5G41920 "AT5G41920" species... 284 5.9e-25 1
TAIR|locus:2015243 - symbol:AT1G63100 "AT1G63100" species... 291 8.5e-25 1
TAIR|locus:2005516 - symbol:RGA1 "REPRESSOR OF GA1-3 1" s... 289 1.0e-24 1
TAIR|locus:2157477 - symbol:RGL3 "RGA-like protein 3" spe... 282 4.1e-24 1
TAIR|locus:2020487 - symbol:LAS "AT1G55580" species:3702 ... 240 2.5e-23 2
TAIR|locus:2101694 - symbol:AT3G50650 "AT3G50650" species... 256 3.2e-21 1
TAIR|locus:2008086 - symbol:SCL3 "AT1G50420" species:3702... 224 7.4e-21 2
TAIR|locus:2040701 - symbol:AT2G37650 species:3702 "Arabi... 253 1.3e-20 1
UNIPROTKB|Q84MM9 - symbol:MOC1 "Protein MONOCULM 1" speci... 188 6.5e-20 2
TAIR|locus:2025022 - symbol:SCL14 "SCARECROW-like 14" spe... 242 2.2e-19 1
TAIR|locus:2148293 - symbol:AT5G59450 species:3702 "Arabi... 239 1.8e-18 1
TAIR|locus:2075155 - symbol:AT3G46600 species:3702 "Arabi... 236 5.7e-18 1
TAIR|locus:2132482 - symbol:AT4G08250 "AT4G08250" species... 231 2.0e-17 1
TAIR|locus:2025032 - symbol:AT1G07520 "AT1G07520" species... 228 1.2e-16 1
TAIR|locus:2184625 - symbol:SCL8 "AT5G52510" species:3702... 164 1.8e-12 2
TAIR|locus:2126901 - symbol:HAM3 "AT4G00150" species:3702... 148 2.1e-07 1
TAIR|locus:2101801 - symbol:HAM2 "AT3G60630" species:3702... 146 4.2e-07 1
TAIR|locus:2115340 - symbol:HAM4 "AT4G36710" species:3702... 131 1.4e-05 1
UNIPROTKB|Q6DLS1 - symbol:SCL1 "SCARECROW-like protein" s... 128 2.7e-05 1
TAIR|locus:1009023400 - symbol:AT5G67411 "AT5G67411" spec... 115 0.00012 1
>TAIR|locus:2120106 [details] [associations]
symbol:SHR "AT4G37650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008356 "asymmetric cell division"
evidence=IMP] [GO:0009956 "radial pattern formation" evidence=IMP]
[GO:0032350 "regulation of hormone metabolic process" evidence=NAS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0055072 "iron ion
homeostasis" evidence=IMP] [GO:0045930 "negative regulation of
mitotic cell cycle" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 GO:GO:0005737
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0007049 EMBL:AL035605 EMBL:AL161591
GO:GO:0048366 GO:GO:0008356 GO:GO:0055072 GO:GO:0009956
GO:GO:0032350 InterPro:IPR005202 PROSITE:PS50985 EMBL:AF233752
EMBL:BT033026 EMBL:AY074547 IPI:IPI00525426 PIR:T04722
RefSeq:NP_195480.1 UniGene:At.2816 UniGene:At.71893 IntAct:Q9SZF7
STRING:Q9SZF7 PaxDb:Q9SZF7 PRIDE:Q9SZF7 EnsemblPlants:AT4G37650.1
GeneID:829919 KEGG:ath:AT4G37650 GeneFarm:4260 TAIR:At4g37650
eggNOG:NOG301144 HOGENOM:HOG000078767 InParanoid:Q9SZF7 OMA:EIGNRME
PhylomeDB:Q9SZF7 ProtClustDB:CLSN2685807 Genevestigator:Q9SZF7
Uniprot:Q9SZF7
Length = 531
Score = 875 (313.1 bits), Expect = 1.4e-87, P = 1.4e-87
Identities = 178/322 (55%), Positives = 223/322 (69%)
Query: 63 PCADTTGGNKWASKLLKECARAISDKDSSKIHHLLWMLNELASPYGDCDQKLASYFLQAL 122
P D + KWA +L E ARA SDKD+++ +LW LNEL+SPYGD +QKLASYFLQAL
Sbjct: 132 PSFDFSANAKWADSVLLEAARAFSDKDTARAQQILWTLNELSSPYGDTEQKLASYFLQAL 191
Query: 123 FCKATESGQRCYKTLTSVA--EKSHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALD 180
F + T SG+RCY+T+ + A EK+ SF+S RK +LKFQEVSPW TFGHVA+NGAILEA+D
Sbjct: 192 FNRMTGSGERCYRTMVTAAATEKTCSFESTRKTVLKFQEVSPWATFGHVAANGAILEAVD 251
Query: 181 GETKLHIIDMSNTLCTQWPTLLEALATRNDETPHXXXXXXXXX-------XXXXXXMKEI 233
GE K+HI+D+S+T CTQWPTLLEALATR+D+TPH MKEI
Sbjct: 252 GEAKIHIVDISSTFCTQWPTLLEALATRSDDTPHLRLTTVVVANKFVNDQTASHRMMKEI 311
Query: 234 GQRMEKFARLMGVPFEFKVITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVE--ER 291
G RMEKFARLMGVPF+F +I + L E L VK DE +A+NC+GA+ +A R
Sbjct: 312 GNRMEKFARLMGVPFKFNIIHHVGDLSEFDLNELDVKPDEVLAINCVGAMHGIASRGSPR 371
Query: 292 GAVIQMFQSLKPKVVTIVEEEADLTSSR---YD--FVKCFEECLRFYTLYFEMLEESFVP 346
AVI F+ L+P++VT+VEEEADL +D F++ F ECLR++ + FE EESF
Sbjct: 372 DAVISSFRRLRPRIVTVVEEEADLVGEEEGGFDDEFLRGFGECLRWFRVCFESWEESFPR 431
Query: 347 TSNERLMLERECSRDIVRVLAC 368
TSNERLMLER R IV ++AC
Sbjct: 432 TSNERLMLERAAGRAIVDLVAC 453
>TAIR|locus:2164783 [details] [associations]
symbol:PAT1 "AT5G48150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0009640 "photomorphogenesis"
evidence=IMP] Pfam:PF03514 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0009640
GO:GO:0004871 EMBL:AB023039 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF153443 EMBL:BT025326 EMBL:AK117483
IPI:IPI00517897 RefSeq:NP_199626.1 RefSeq:NP_974903.1
UniGene:At.7076 PRIDE:Q9LDL7 EnsemblPlants:AT5G48150.1
EnsemblPlants:AT5G48150.2 GeneID:834867 KEGG:ath:AT5G48150
GeneFarm:4233 TAIR:At5g48150 eggNOG:NOG287245 InParanoid:Q9LDL7
OMA:NSAHARG PhylomeDB:Q9LDL7 ProtClustDB:CLSN2686580
Genevestigator:Q9LDL7 Uniprot:Q9LDL7
Length = 490
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 94/301 (31%), Positives = 156/301 (51%)
Query: 78 LKECARAISDKDSSKIHHLLWMLNELASPYGDCDQKLASYFLQALFCKATESGQRCYKTL 137
L CA+A+S+ D H ++ L ++ S G+ Q+L +Y L+ L + SG YK L
Sbjct: 123 LVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGSSIYKAL 182
Query: 138 TSVAEKSHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALDGETKLHIIDMSNTLCTQ 197
E + + + IL EV P+ FG++++NGAI EA+ E ++HIID +Q
Sbjct: 183 NRCPEPASTELLSYMHIL--YEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQ 240
Query: 198 WPTLLEALATRNDETPHXXXXXXXXXXXXXXX---MKEIGQRMEKFARLMGVPFEFKVIT 254
W TL++A A R P + +G R+ K A+ VPFEF ++
Sbjct: 241 WVTLIQAFAARPGGPPRIRITGIDDMTSAYARGGGLSIVGNRLAKLAKQFNVPFEFNSVS 300
Query: 255 GLNRLVELTKGTLGVKEDEAVAVNCIGALRR-----VAVEE-RGAVIQMFQSLKPKVVTI 308
+ E+ LGV+ EA+AVN L V+ E R +++M +SL PKVVT+
Sbjct: 301 V--SVSEVKPKNLGVRPGEALAVNFAFVLHHMPDESVSTENHRDRLLRMVKSLSPKVVTL 358
Query: 309 VEEEADLTSSRYDFVKCFEECLRFYTLYFEMLEESFVPTSNERLMLEREC-SRDIVRVLA 367
VE+E++ ++ + F + F E + +Y FE ++ + +R+ +E+ C +RD+V ++A
Sbjct: 359 VEQESNTNTAAF-FPR-FMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIA 416
Query: 368 C 368
C
Sbjct: 417 C 417
>TAIR|locus:2044973 [details] [associations]
symbol:SCL21 "AT2G04890" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006955 EMBL:AC007211
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:AF210732 EMBL:AK175210 EMBL:AK175990 EMBL:AK176099
EMBL:AK221099 EMBL:BT026455 IPI:IPI00534889 PIR:G84462
RefSeq:NP_178566.1 UniGene:At.48419 UniGene:At.71110 IntAct:Q9S7H5
EnsemblPlants:AT2G04890.1 GeneID:815036 KEGG:ath:AT2G04890
GeneFarm:4231 TAIR:At2g04890 eggNOG:NOG292869 InParanoid:Q9S7H5
OMA:HKERINI PhylomeDB:Q9S7H5 ProtClustDB:CLSN2912915
Genevestigator:Q9S7H5 Uniprot:Q9S7H5
Length = 413
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 95/299 (31%), Positives = 153/299 (51%)
Query: 77 LLKECARAISDKDSSKIHHLLWMLNELASPYGDCDQKLASYFLQALFCKATESGQRCYKT 136
+L CA+A+S+ + + L + S G+ Q+L +Y L+ L + SG YK+
Sbjct: 53 VLVACAKAVSENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVARLAASGSSIYKS 112
Query: 137 LTSVAEKSHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALDGETKLHIIDMSNTLCT 196
L S +S+ F S + EV P+ FG++++NGAI EA+ E ++HIID +
Sbjct: 113 LQSREPESYEFLS---YVYVLHEVCPYFKFGYMSANGAIAEAMKDEERIHIIDFQIGQGS 169
Query: 197 QWPTLLEALATRNDETPHXXXXXXXXXXXXXXXMKEIGQRMEKFARLMGVPFEFKVITGL 256
QW L++A A R P+ K R+EK A+ VPF F ++
Sbjct: 170 QWIALIQAFAARPGGAPNIRITGVGDGSVLVTVKK----RLEKLAKKFDVPFRFNAVSRP 225
Query: 257 NRLVELTKGTLGVKEDEAVAVNCIGALRR-----VAVEE-RGAVIQMFQSLKPKVVTIVE 310
+ VE+ L V++ EA+ VN L V++E R +++M +SL PKVVT+VE
Sbjct: 226 SCEVEVEN--LDVRDGEALGVNFAYMLHHLPDESVSMENHRDRLLRMVKSLSPKVVTLVE 283
Query: 311 EEADLTSSRYDFVKCFEECLRFYTLYFEMLEESFVPTSNERLMLEREC-SRDIVRVLAC 368
+E + +S F+ F E L +YT FE ++ ER+ +E+ C +RD+V ++AC
Sbjct: 284 QECNTNTS--PFLPRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARDVVNIIAC 340
>TAIR|locus:2026982 [details] [associations]
symbol:SCL1 "AT1G21450" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
EMBL:AC015447 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF210731 EMBL:AY045833 EMBL:AY096626
EMBL:AY084492 EMBL:AF036300 IPI:IPI00538394 PIR:E86347 PIR:T51234
RefSeq:NP_173566.1 UniGene:At.14825 ProteinModelPortal:Q9SDQ3
STRING:Q9SDQ3 PaxDb:Q9SDQ3 PRIDE:Q9SDQ3 EnsemblPlants:AT1G21450.1
GeneID:838743 KEGG:ath:AT1G21450 GeneFarm:4232 TAIR:At1g21450
eggNOG:NOG324880 InParanoid:Q9SDQ3 OMA:SINDEWA PhylomeDB:Q9SDQ3
ProtClustDB:CLSN2913658 Genevestigator:Q9SDQ3 Uniprot:Q9SDQ3
Length = 593
Score = 358 (131.1 bits), Expect = 2.7e-32, P = 2.7e-32
Identities = 99/306 (32%), Positives = 159/306 (51%)
Query: 76 KLLKECARAISDKDSSKIHHLLWMLNEL---ASPYGDCDQKLASYFLQALFCKATESGQR 132
++L CARA+S+ K+ L M+NEL S GD Q++A+Y ++ L + SG+
Sbjct: 224 QILISCARALSE---GKLEEALSMVNELRQIVSIQGDPSQRIAAYMVEGLAARMAASGKF 280
Query: 133 CYKTLTSVAEKSHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALDGETKLHIIDMSN 192
Y+ L S +A +++ EV P FG +A+NGAILEA+ GE ++HIID
Sbjct: 281 IYRALKCKEPPSDERLAAMQVLF---EVCPCFKFGFLAANGAILEAIKGEEEVHIIDFDI 337
Query: 193 TLCTQWPTLLEALATRNDETPHXXXXXXX---XXXXXXXXMKEIGQRMEKFARLMGVPFE 249
Q+ TL+ ++A + P ++ IG R+E+ A GV F+
Sbjct: 338 NQGNQYMTLIRSIAELPGKRPRLRLTGIDDPESVQRSIGGLRIIGLRLEQLAEDNGVSFK 397
Query: 250 FKVITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRV------AVEERGAVIQMFQSLKP 303
FK + +V + TLG K E + VN L + V +R ++ M +SL P
Sbjct: 398 FKAMPSKTSIV--SPSTLGCKPGETLIVNFAFQLHHMPDESVTTVNQRDELLHMVKSLNP 455
Query: 304 KVVTIVEEEADLTSSRYDFVKCFEECLRFYTLYFEMLEESFVPTSNERLMLEREC-SRDI 362
K+VT+VE++ + +S + F + F E +Y+ FE L+ + S ER+ +ER+C +RDI
Sbjct: 456 KLVTVVEQDVNTNTSPF-FPR-FIEAYEYYSAVFESLDMTLPRESQERMNVERQCLARDI 513
Query: 363 VRVLAC 368
V ++AC
Sbjct: 514 VNIVAC 519
>TAIR|locus:2008076 [details] [associations]
symbol:SCL5 "AT1G50600" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC079279 EMBL:AC012561
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG287245 EMBL:AY034929 EMBL:AY039611 EMBL:BT000883
EMBL:AF036302 IPI:IPI00519165 PIR:E96542 PIR:T51236
RefSeq:NP_175475.2 UniGene:At.14827 STRING:Q8H125 PaxDb:Q8H125
PRIDE:Q8H125 EnsemblPlants:AT1G50600.1 GeneID:841482
KEGG:ath:AT1G50600 GeneFarm:4229 TAIR:At1g50600 InParanoid:Q8H125
OMA:REERHEP PhylomeDB:Q8H125 ProtClustDB:CLSN2918355
ArrayExpress:Q8H125 Genevestigator:Q8H125 Uniprot:Q8H125
Length = 597
Score = 336 (123.3 bits), Expect = 7.7e-30, P = 7.7e-30
Identities = 93/302 (30%), Positives = 148/302 (49%)
Query: 77 LLKECARAISDKDSSKIHHLLWMLNELASPYGDCDQKLASYFLQALFCKATESGQRCYKT 136
+L ECA+A+ + D L+ L ++ S G+ Q+L +Y L+ L + SG YK
Sbjct: 230 VLYECAKAVENYDLEMTDWLISQLQQMVSVSGEPVQRLGAYMLEGLVARLASSGSSIYKA 289
Query: 137 LTSVAEKSHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALDGETKLHIIDMSNTLCT 196
L K + + E P+ FG+ ++NGAI EA+ E+ +HIID +
Sbjct: 290 LRC---KDPTGPELLTYMHILYEACPYFKFGYESANGAIAEAVKNESFVHIIDFQISQGG 346
Query: 197 QWPTLLEALATRNDETPHXXXXXXX---XXXXXXXXMKEIGQRMEKFARLMGVPFEFKVI 253
QW +L+ AL R P+ ++ +GQR+ K A + GVPFEF
Sbjct: 347 QWVSLIRALGARPGGPPNVRITGIDDPRSSFARQGGLELVGQRLGKLAEMCGVPFEFHGA 406
Query: 254 TGLNRLVELTKGTLGVKEDEAVAVNCIGALRR-----VAVEE-RGAVIQMFQSLKPKVVT 307
VE+ K LGV+ EA+AVN L V VE R ++++ + L P VVT
Sbjct: 407 ALCCTEVEIEK--LGVRNGEALAVNFPLVLHHMPDESVTVENHRDRLLRLVKHLSPNVVT 464
Query: 308 IVEEEADLTSSRYDFVKCFEECLRFYTLYFEMLEESFVPTSNERLMLEREC-SRDIVRVL 366
+VE+EA+ ++ F+ F E + Y FE ++ ER+ +E+ C +R++V ++
Sbjct: 465 LVEQEANTNTA--PFLPRFVETMNHYLAVFESIDVKLARDHKERINVEQHCLAREVVNLI 522
Query: 367 AC 368
AC
Sbjct: 523 AC 524
>TAIR|locus:2080345 [details] [associations]
symbol:SCR "SCARECROW" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009630
"gravitropism" evidence=IMP] [GO:0009956 "radial pattern formation"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IMP] [GO:0008356 "asymmetric cell division"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
GO:GO:0009630 GO:GO:0008356 GO:GO:0051457 EMBL:AL132957
GO:GO:0010103 GO:GO:0009956 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:U62798 EMBL:AY056315 EMBL:AY080840
EMBL:AY113991 IPI:IPI00524888 PIR:T47581 PIR:T51244
RefSeq:NP_190990.1 UniGene:At.71814 UniGene:At.932 IntAct:Q9M384
STRING:Q9M384 EnsemblPlants:AT3G54220.1 GeneID:824589
KEGG:ath:AT3G54220 GeneFarm:4242 TAIR:At3g54220 eggNOG:NOG311437
InParanoid:Q9M384 OMA:QERENSS PhylomeDB:Q9M384
ProtClustDB:CLSN2915643 Genevestigator:Q9M384 Uniprot:Q9M384
Length = 653
Score = 328 (120.5 bits), Expect = 8.0e-29, P = 8.0e-29
Identities = 92/294 (31%), Positives = 149/294 (50%)
Query: 77 LLKECARAISDKDSSKIHHLLWMLNELASPYGDCDQKLASYFLQALFCKATESGQRCYKT 136
LL +CA A+S + + + LL +++L++PYG Q++A+YF +A+ + S Y
Sbjct: 293 LLLQCAEAVSADNLEEANKLLLEISQLSTPYGTSAQRVAAYFSEAMSARLLNSCLGIYAA 352
Query: 137 LTSV-AEKSHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALDGETKLHIIDMSNTLC 195
L S ++HS + F +SP F H +N AI EA + E +HIID+
Sbjct: 353 LPSRWMPQTHSLKMVSAFQV-FNGISPLVKFSHFTANQAIQEAFEKEDSVHIIDLDIMQG 411
Query: 196 TQWPTLLEALATRNDETPHXXXXXXXXXXXXXXXMKEIGQRMEKFARLMGVPFEFKVITG 255
QWP L LA+R PH ++ G+R+ FA +G+PFEF +
Sbjct: 412 LQWPGLFHILASRPGGPPHVRLTGLGTSMEA---LQATGKRLSDFADKLGLPFEFCPLA- 467
Query: 256 LNRLVELTKGTLGVKEDEAVAVNCIG-ALRRVAVEERGAVIQMFQSLKPKVVTIVEEEAD 314
++ L L V++ EAVAV+ + +L V + + + Q L PKVVT+VE++
Sbjct: 468 -EKVGNLDTERLNVRKREAVAVHWLQHSLYDVTGSD-AHTLWLLQRLAPKVVTVVEQDLS 525
Query: 315 LTSSRYDFVKCFEECLRFYTLYFEMLEESFVPTSNERLMLEREC-SRDIVRVLA 367
S F+ F E + +Y+ F+ L S+ S ER ++E++ S++I VLA
Sbjct: 526 HAGS---FLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSKEIRNVLA 576
>TAIR|locus:2099624 [details] [associations]
symbol:RGL2 "RGA-like 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0010187 "negative regulation of seed
germination" evidence=IMP] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=TAS]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:2000377 "regulation of reactive oxygen species metabolic
process" evidence=IGI] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009062 "fatty acid catabolic process"
evidence=RCA] [GO:0009686 "gibberellin biosynthetic process"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] Pfam:PF03514 GO:GO:0009737 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0030154 GO:GO:0006952
GO:GO:0009723 GO:GO:0003700 GO:GO:0006351 GO:GO:0010187
GO:GO:0009908 GO:GO:0042538 EMBL:AC009895 GO:GO:2000377
GO:GO:0040029 GO:GO:0009867 GO:GO:0009863 GO:GO:0009740
eggNOG:NOG243696 HOGENOM:HOG000238577 KO:K14494 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AK118009 IPI:IPI00521981 RefSeq:NP_186995.1
UniGene:At.18489 UniGene:At.67027 ProteinModelPortal:Q8GXW1
SMR:Q8GXW1 IntAct:Q8GXW1 STRING:Q8GXW1 EnsemblPlants:AT3G03450.1
GeneID:821251 KEGG:ath:AT3G03450 GeneFarm:4240 TAIR:At3g03450
InParanoid:Q8GXW1 OMA:MLSELNN PhylomeDB:Q8GXW1
ProtClustDB:CLSN2684085 Genevestigator:Q8GXW1 GermOnline:AT3G03450
Uniprot:Q8GXW1
Length = 547
Score = 304 (112.1 bits), Expect = 1.8e-26, P = 1.8e-26
Identities = 90/296 (30%), Positives = 146/296 (49%)
Query: 78 LKECARAISDKDSSKIHHLLWMLNELASPYGDCDQKLASYFLQALFCKATESGQRCYKTL 137
L CA AI ++ + L+ + LA K+A+YF QAL + R Y
Sbjct: 184 LVACAEAIHQENLNLADALVKRVGTLAGSQAGAMGKVATYFAQALARRI----YRDYTAE 239
Query: 138 TSV-AEKSHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALDGETKLHIIDMSNTLCT 196
T V A + SF+ L + F E P+ F H +N AILEA+ ++H+ID+
Sbjct: 240 TDVCAAVNPSFEEV--LEMHFYESCPYLKFAHFTANQAILEAVTTARRVHVIDLGLNQGM 297
Query: 197 QWPTLLEALATRNDETPHXXXXXXXX-XXXXXXXMKEIGQRMEKFARLMGVPFEFKVITG 255
QWP L++ALA R P ++++G ++ +FA+ MGV FEFK +
Sbjct: 298 QWPALMQALALRPGGPPSFRLTGIGPPQTENSDSLQQLGWKLAQFAQNMGVEFEFKGLAA 357
Query: 256 LNRLVELTKGTLGVK-EDEAVAVNCIGALRRVAVEERGAVIQMF---QSLKPKVVTIVEE 311
L +L + E E + VN + L R+ G++ ++ +++KP +VT+VE+
Sbjct: 358 -ESLSDLEPEMFETRPESETLVVNSVFELHRLLARS-GSIEKLLNTVKAIKPSIVTVVEQ 415
Query: 312 EADLTSSRYDFVKCFEECLRFYTLYFEMLEESFVPTSNERLMLERECSRDIVRVLA 367
EA+ + F+ F E L +Y+ F+ LE+S+ S +R+M E R I+ V+A
Sbjct: 416 EAN--HNGIVFLDRFNEALHYYSSLFDSLEDSYSLPSQDRVMSEVYLGRQILNVVA 469
>TAIR|locus:2083073 [details] [associations]
symbol:AT3G49950 "AT3G49950" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132978
InterPro:IPR005202 PROSITE:PS50985 eggNOG:NOG309215 EMBL:BT012553
EMBL:AK226623 IPI:IPI00534186 PIR:T45848 RefSeq:NP_190564.1
UniGene:At.50260 EnsemblPlants:AT3G49950.1 GeneID:824157
KEGG:ath:AT3G49950 GeneFarm:4259 TAIR:At3g49950
HOGENOM:HOG000241523 InParanoid:Q9SN22 OMA:MSMDFRV PhylomeDB:Q9SN22
ProtClustDB:CLSN2684384 Genevestigator:Q9SN22 Uniprot:Q9SN22
Length = 410
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 88/317 (27%), Positives = 153/317 (48%)
Query: 69 GGNKWASKLLKECARAISDKDSSKIHHLLWMLNELASPYGDCDQKLASYFLQALFCKATE 128
G + +LL CA AI D++ H +LW+LN +A P GD Q+L S FL+AL +A
Sbjct: 22 GDANFMEQLLLHCATAIDSNDAALTHQILWVLNNIAPPDGDSTQRLTSAFLRALLSRAVS 81
Query: 129 SGQRCYKTLTSV--AEKSHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALDGETKLH 186
T++ + A++ H F + F +++PW FG +A+N AIL A++G + +H
Sbjct: 82 KTPTLSSTISFLPQADELHRFSVVE--LAAFVDLTPWHRFGFIAANAAILTAVEGYSTVH 139
Query: 187 IIDMSNTLCTQWPTLLEALATRNDETPHXXXXXXXXXXXXX-----XXMKEIGQRMEKFA 241
I+D+S T C Q PTL++A+A+R ++ P +E+G ++ FA
Sbjct: 140 IVDLSLTHCMQIPTLIDAMASRLNKPPPLLKLTVVSSSDHFPPFINISYEELGSKLVNFA 199
Query: 242 RLMGVPFEFKVIT-----GLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVE----ERG 292
+ EF ++ G + L++ + +EA+ VNC LR + E
Sbjct: 200 TTRNITMEFTIVPSTYSDGFSSLLQQLR-IYPSSFNEALVVNCHMMLRYIPEEPLTSSSS 258
Query: 293 AVIQMF-QSLKPKVVTIVEE-EADLTSSRYDFVKCFEECLRFYTLYFEMLEESFVPTSNE 350
++ +F + L+ IV E D+ + + V + ++ + F+ + +F+ S +
Sbjct: 259 SLRTVFLKQLRSLNPRIVTLIEEDVDLTSENLVNRLKSAFNYFWIPFDTTD-TFM--SEQ 315
Query: 351 RLMLERECSRDIVRVLA 367
R E E S I V+A
Sbjct: 316 RRWYEAEISWKIENVVA 332
>TAIR|locus:2087994 [details] [associations]
symbol:AT3G13840 "AT3G13840" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB028610
InterPro:IPR005202 PROSITE:PS50985 IPI:IPI00544801
RefSeq:NP_188000.1 UniGene:At.64114 PaxDb:Q9LRW3 PRIDE:Q9LRW3
EnsemblPlants:AT3G13840.1 GeneID:820596 KEGG:ath:AT3G13840
GeneFarm:4262 TAIR:At3g13840 eggNOG:NOG262645 HOGENOM:HOG000240132
InParanoid:Q9LRW3 OMA:WFAFPNN PhylomeDB:Q9LRW3
ProtClustDB:CLSN2684819 Genevestigator:Q9LRW3 Uniprot:Q9LRW3
Length = 510
Score = 295 (108.9 bits), Expect = 1.3e-25, P = 1.3e-25
Identities = 91/303 (30%), Positives = 146/303 (48%)
Query: 70 GNK---WASKLLKECARAISDKDSSKIHHLLWMLNELASPYGDCDQKLASYFLQAL--FC 124
GNK WA KLL CA AI+ +SS++ H L +L+ELAS GD +++LA++ L+AL
Sbjct: 138 GNKEGRWAEKLLNPCALAITASNSSRVQHYLCVLSELASSSGDANRRLAAFGLRALQHHL 197
Query: 125 KATESGQRCYKTLTSVAEKSHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALDGETK 184
++ + T + + F +K +LKF EVSPW + +N AIL+ L + K
Sbjct: 198 SSSSVSSSFWPVFTFASAEVKMF---QKTLLKFYEVSPWFALPNNMANSAILQILAQDPK 254
Query: 185 ----LHIIDMSNTLCTQWPTLLEALATRNDETPHXXXXXXXXXXXXXXXMKEIGQRMEKF 240
LHIID+ + QWPTLLEAL+ R + P +G +
Sbjct: 255 DKKDLHIIDIGVSHGMQWPTLLEALSCRLEGPPPRVRITVISDLTADIPFS-VGPPGYNY 313
Query: 241 -ARLMGVPFEFKVITGLNRLVELTKGTLGVKEDEAVAVNC-IGALRRVAVEERGAVIQMF 298
++L+G K+ ++ L +L E+ V + L+ +ERG ++
Sbjct: 314 GSQLLGFARSLKINLQISVLDKLQLIDTSPHENLIVCAQFRLHHLKHSINDERGETLKAV 373
Query: 299 QSLKPKVVTIVEEEADLTSSRYDFVKCFEECLRFYTLYFEMLEESFVP-TSNERLMLERE 357
+SL+PK V + E + +SS DF F + L + + + F S ER ++E E
Sbjct: 374 RSLRPKGVVLCENNGECSSSA-DFAAGFSKKLEYVWKFLDSTSSGFKEENSEERKLMEGE 432
Query: 358 CSR 360
++
Sbjct: 433 ATK 435
>TAIR|locus:2174974 [details] [associations]
symbol:AT5G66770 "AT5G66770" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB010700
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY062538 EMBL:BT002580
IPI:IPI00537848 RefSeq:NP_201478.1 UniGene:At.27307
ProteinModelPortal:Q9FL03 IntAct:Q9FL03 PRIDE:Q9FL03
EnsemblPlants:AT5G66770.1 GeneID:836810 KEGG:ath:AT5G66770
GeneFarm:4249 TAIR:At5g66770 eggNOG:NOG324692 HOGENOM:HOG000240374
InParanoid:Q9FL03 OMA:DASCSAP PhylomeDB:Q9FL03
ProtClustDB:CLSN2684429 Genevestigator:Q9FL03 Uniprot:Q9FL03
Length = 584
Score = 294 (108.6 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 92/292 (31%), Positives = 142/292 (48%)
Query: 76 KLLKECARAISDKDSSKIHHLLWMLNELASPYGDCDQKLASYFLQALFCKATESGQRCYK 135
K + +CAR ISD D ++ L + E S GD +++A YF +AL + + +
Sbjct: 219 KAIYDCAR-ISDSDPNEASKTLLQIRESVSELGDPTERVAFYFTEALSNRLSPN------ 271
Query: 136 TLTSVAEKSHSFDSARKLILKFQEVS---PWTTFGHVASNGAILEALDGETKLHIIDMSN 192
S A S S S LIL ++ ++ P++ F H+ +N AILEA + K+HI+D
Sbjct: 272 ---SPATSSSS-SSTEDLILSYKTLNDACPYSKFAHLTANQAILEATEKSNKIHIVDFGI 327
Query: 193 TLCTQWPTLLEALATRNDETPHXXXXXXXXXXXXXXXMKE----IGQRMEKFARLMGVPF 248
QWP LL+ALATR P + G R+ FA+++ + F
Sbjct: 328 VQGIQWPALLQALATRTSGKPTQIRVSGIPAPSLGESPEPSLIATGNRLRDFAKVLDLNF 387
Query: 249 EFKVITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAV---IQMFQSLKPKV 305
+F I L + L + V DE +AVN + L ++ E V +++ +SL P+V
Sbjct: 388 DFIPI--LTPIHLLNGSSFRVDPDEVLAVNFMLQLYKLLDETPTIVDTALRLAKSLNPRV 445
Query: 306 VTIVEEEADLTSSRYDFVKCFEECLRFYTLYFEMLEESFVPTSNERLMLERE 357
VT+ E E L +R F + L+FY+ FE LE + S ER+ +ERE
Sbjct: 446 VTLGEYEVSL--NRVGFANRVKNALQFYSAVFESLEPNLGRDSEERVRVERE 495
>TAIR|locus:2201557 [details] [associations]
symbol:RGL1 "RGA-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IMP]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=IGI;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009737 GO:GO:0005634 GO:GO:0030154 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0009908 GO:GO:0042538
GO:GO:2000377 EMBL:AC020665 GO:GO:0040029 GO:GO:0009867
GO:GO:0009863 GO:GO:0009740 HOGENOM:HOG000238577 KO:K14494
GO:GO:0009938 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AJ224957 EMBL:AY048749 EMBL:AY070035
EMBL:AY096506 IPI:IPI00518407 PIR:G96688 RefSeq:NP_176809.1
UniGene:At.26400 UniGene:At.75607 ProteinModelPortal:Q9C8Y3
SMR:Q9C8Y3 IntAct:Q9C8Y3 STRING:Q9C8Y3 EnsemblPlants:AT1G66350.1
GeneID:842953 KEGG:ath:AT1G66350 GeneFarm:4239 TAIR:At1g66350
eggNOG:NOG314007 InParanoid:Q9C8Y3 OMA:TSAWRIN PhylomeDB:Q9C8Y3
ProtClustDB:CLSN2914366 Genevestigator:Q9C8Y3 GermOnline:AT1G66350
Uniprot:Q9C8Y3
Length = 511
Score = 290 (107.1 bits), Expect = 4.8e-25, P = 4.8e-25
Identities = 88/295 (29%), Positives = 141/295 (47%)
Query: 78 LKECARAISDKDSSKIHHLLWMLNELASPYGDCDQKLASYFLQALFCKATESGQRCYKTL 137
L CA A+ + L+ + LAS +K+A+YF + L +R Y+
Sbjct: 156 LLACAEAVQQNNLKLADALVKHVGLLASSQAGAMRKVATYFAEGL-------ARRIYRIY 208
Query: 138 TSVAEKSHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALDGETKLHIIDMSNTLCTQ 197
SF L + F E P+ F H +N AILE K+H+ID+ Q
Sbjct: 209 PRDDVALSSFSDT--LQIHFYESCPYLKFAHFTANQAILEVFATAEKVHVIDLGLNHGLQ 266
Query: 198 WPTLLEALATRNDETPHXXXXXXXXXXXXXXXMKEIGQRMEKFARLMGVPFEFKVITGLN 257
WP L++ALA R + P ++E+G ++ + A +GV FEFK I LN
Sbjct: 267 WPALIQALALRPNGPPDFRLTGIGYSLTD---IQEVGWKLGQLASTIGVNFEFKSIA-LN 322
Query: 258 RLVELTKGTLGVKED-EAVAVNCIGALRRVAVEERGAV---IQMFQSLKPKVVTIVEEEA 313
L +L L ++ E+VAVN + L R+ G++ + +S++P ++T+VE+EA
Sbjct: 323 NLSDLKPEMLDIRPGLESVAVNSVFELHRLLAHP-GSIDKFLSTIKSIRPDIMTVVEQEA 381
Query: 314 DLTSSRYDFVKCFEECLRFYTLYFEMLEESFVPTSNERLMLERECSRDIVRVLAC 368
+ + F+ F E L +Y+ F+ LE P S +R+M E R I+ ++AC
Sbjct: 382 NHNGTV--FLDRFTESLHYYSSLFDSLEG---PPSQDRVMSELFLGRQILNLVAC 431
>TAIR|locus:2006747 [details] [associations]
symbol:GAI "GIBBERELLIC ACID INSENSITIVE" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA;TAS] [GO:0009938 "negative regulation of gibberellic
acid mediated signaling pathway" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010233 "phloem transport"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IGI]
[GO:0009723 "response to ethylene stimulus" evidence=IGI;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:0010187 "negative regulation of seed germination" evidence=IGI]
[GO:0010218 "response to far red light" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0006808 "regulation of nitrogen utilization"
evidence=IMP] Pfam:PF03514 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0010218 GO:GO:0010187
GO:GO:0006808 GO:GO:0042538 GO:GO:2000377 EMBL:AC006917
GO:GO:0010233 GO:GO:0040029 GO:GO:0009867 GO:GO:0009863
GO:GO:0009740 EMBL:Y11337 EMBL:Y15193 EMBL:AY058194 EMBL:AY142002
IPI:IPI00535232 PIR:H86282 RefSeq:NP_172945.1 UniGene:At.15032
UniGene:At.75604 PDB:2ZSH PDB:2ZSI PDBsum:2ZSH PDBsum:2ZSI
ProteinModelPortal:Q9LQT8 SMR:Q9LQT8 DIP:DIP-32985N IntAct:Q9LQT8
STRING:Q9LQT8 EnsemblPlants:AT1G14920.1 GeneID:838057
KEGG:ath:AT1G14920 GeneFarm:4235 TAIR:At1g14920 eggNOG:NOG243696
HOGENOM:HOG000238577 InParanoid:Q9LQT8 KO:K14494 OMA:RRVYRFR
PhylomeDB:Q9LQT8 ProtClustDB:CLSN2682993 EvolutionaryTrace:Q9LQT8
Genevestigator:Q9LQT8 GermOnline:AT1G14920 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 Uniprot:Q9LQT8
Length = 533
Score = 290 (107.1 bits), Expect = 5.7e-25, P = 5.7e-25
Identities = 87/297 (29%), Positives = 144/297 (48%)
Query: 78 LKECARAISDKDSSKIHHLLWMLNELASPYGDCDQKLASYFLQALFCKATESGQRCYKTL 137
L CA A+ ++ + L+ + LA +K+A+YF +AL +R Y+
Sbjct: 173 LLACAEAVQKENLTVAEALVKQIGFLAVSQIGAMRKVATYFAEAL-------ARRIYRLS 225
Query: 138 TSVAEKSHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALDGETKLHIIDMSNTLCTQ 197
S + HS L + F E P+ F H +N AILEA G+ ++H+ID S + Q
Sbjct: 226 PSQSPIDHSLSDT--LQMHFYETCPYLKFAHFTANQAILEAFQGKKRVHVIDFSMSQGLQ 283
Query: 198 WPTLLEALATRNDETP-HXXXXXXXXXXXXXXXMKEIGQRMEKFARLMGVPFEFKVITGL 256
WP L++ALA R P + E+G ++ A + V FE++
Sbjct: 284 WPALMQALALRPGGPPVFRLTGIGPPAPDNFDYLHEVGCKLAHLAEAIHVEFEYRGFVA- 342
Query: 257 NRLVELTKGTLGVK--EDEAVAVNCIGALRRVAVEERGA---VIQMFQSLKPKVVTIVEE 311
N L +L L ++ E E+VAVN + L ++ + GA V+ + +KP++ T+VE+
Sbjct: 343 NTLADLDASMLELRPSEIESVAVNSVFELHKL-LGRPGAIDKVLGVVNQIKPEIFTVVEQ 401
Query: 312 EADLTSSRYDFVKCFEECLRFYTLYFEMLEESFVPTSNERLMLERECSRDIVRVLAC 368
E++ S F+ F E L +Y+ F+ LE VP+ +++M E + I V+AC
Sbjct: 402 ESNHNSPI--FLDRFTESLHYYSTLFDSLEG--VPSGQDKVMSEVYLGKQICNVVAC 454
>TAIR|locus:2165685 [details] [associations]
symbol:AT5G41920 "AT5G41920" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB017067
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:BT029760 IPI:IPI00535918 RefSeq:NP_199007.1 UniGene:At.67848
UniGene:At.72727 IntAct:Q9FHZ1 DNASU:834197
EnsemblPlants:AT5G41920.1 GeneID:834197 KEGG:ath:AT5G41920
GeneFarm:4246 TAIR:At5g41920 eggNOG:NOG72098 InParanoid:Q9FHZ1
OMA:PWKGYTL PhylomeDB:Q9FHZ1 ProtClustDB:CLSN2686419
Genevestigator:Q9FHZ1 Uniprot:Q9FHZ1
Length = 405
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 78/284 (27%), Positives = 133/284 (46%)
Query: 77 LLKECARAISDKDSSKIHHLLWMLNELASPYGDCDQKLASYFLQALFCKATESGQRCYKT 136
LL +CA ++ + LL ++E+ SP+G +++ +YF QAL + S
Sbjct: 43 LLLQCAEYVATDHLREASTLLSEISEICSPFGSSPERVVAYFAQALQTRVISS--YLSGA 100
Query: 137 LTSVAEKSHSFDSARKLILKFQ---EVSPWTTFGHVASNGAILEALDGETKLHIIDMSNT 193
+ ++EK + ++K+ Q VSP F H +N AI +ALDGE +HIID+
Sbjct: 101 CSPLSEKPLTVVQSQKIFSALQTYNSVSPLIKFSHFTANQAIFQALDGEDSVHIIDLDVM 160
Query: 194 LCTQWPTLLEALATRNDETPHXXXXXXXXXXXXXXXMKEIGQRMEKFARLMGVPFEFKVI 253
QWP L LA+R + + G+R+ FA + +PFEF I
Sbjct: 161 QGLQWPALFHILASRPRKL---RSIRITGFGSSSDLLASTGRRLADFASSLNLPFEFHPI 217
Query: 254 TGL-NRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMFQSLKPKVVTIVEEE 312
G+ L++ ++ L ++ EAV V+ + +++ + LKP ++T+VE+E
Sbjct: 218 EGIIGNLIDPSQ--LATRQGEAVVVHWMQHRLYDVTGNNLETLEILRRLKPNLITVVEQE 275
Query: 313 ADLTSSRYDFVKCFEECLRFYTLYFEMLEESFVPTSNERLMLER 356
F+ F E L +Y+ F+ L + S ER +E+
Sbjct: 276 LSYDDGG-SFLGRFVEALHYYSALFDALGDGLGEESGERFTVEQ 318
>TAIR|locus:2015243 [details] [associations]
symbol:AT1G63100 "AT1G63100" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0000226 "microtubule cytoskeleton organization"
evidence=RCA] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0048451 "petal formation" evidence=RCA]
[GO:0048453 "sepal formation" evidence=RCA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700
GO:GO:0006351 EMBL:AC010795 InterPro:IPR005202 PROSITE:PS50985
IPI:IPI00520577 PIR:D96656 RefSeq:NP_176498.1 UniGene:At.66082
ProteinModelPortal:Q9CAN3 SMR:Q9CAN3 PRIDE:Q9CAN3
EnsemblPlants:AT1G63100.1 GeneID:842613 KEGG:ath:AT1G63100
GeneFarm:4261 TAIR:At1g63100 eggNOG:NOG286854 HOGENOM:HOG000241666
InParanoid:Q9CAN3 OMA:RTKCENE PhylomeDB:Q9CAN3
ProtClustDB:CLSN2682380 Genevestigator:Q9CAN3 Uniprot:Q9CAN3
Length = 658
Score = 291 (107.5 bits), Expect = 8.5e-25, P = 8.5e-25
Identities = 81/299 (27%), Positives = 143/299 (47%)
Query: 77 LLKECARAISDKDSSKIHHLLWMLNELASPYGDCDQ-KLASYFLQALFCKATESGQRCYK 135
LL C AI ++ + I+H + +LASP G +L +Y+++AL + +
Sbjct: 277 LLTGCLDAIRSRNIAAINHFIARTGDLASPRGRTPMTRLIAYYIEALALRVARMWPHIFH 336
Query: 136 TLTSVAEKSHSFDSARKLILKF-QEVSPWTTFGHVASNGAILEALDGETKLHIIDMSNTL 194
+ E + + L+F +V+P F H +N +L A +G+ ++HIID
Sbjct: 337 -IAPPREFDRTVEDESGNALRFLNQVTPIPKFIHFTANEMLLRAFEGKERVHIIDFDIKQ 395
Query: 195 CTQWPTLLEALATRNDETPHXXXXXXXXXXXXXXXMKEIGQRMEKFARLMGVPFEFKVIT 254
QWP+ ++LA+R + PH + E G R+ FA M + FEF +
Sbjct: 396 GLQWPSFFQSLASRINP-PHHVRITGIGESKLE--LNETGDRLHGFAEAMNLQFEFHPV- 451
Query: 255 GLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF----QSLKPKVVTIVE 310
++RL ++ L VKE E+VAVNC+ + + + GA I+ F +S P + + E
Sbjct: 452 -VDRLEDVRLWMLHVKEGESVAVNCVMQMHKTLYDGTGAAIRDFLGLIRSTNPIALVLAE 510
Query: 311 EEADLTSSRYDFVKCFEECLRFYTLYFEMLEESFVPTSNERLMLEREC-SRDIVRVLAC 368
+EA+ S + + C L++Y+ F+ + + S R+ +E R+I ++AC
Sbjct: 511 QEAEHNSEQLETRVC--NSLKYYSAMFDAIHTNLATDSLMRVKVEEMLFGREIRNIVAC 567
>TAIR|locus:2005516 [details] [associations]
symbol:RGA1 "REPRESSOR OF GA1-3 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0009740
"gibberellic acid mediated signaling pathway" evidence=RCA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009723 "response to ethylene
stimulus" evidence=IGI;RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=IGI;RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=IGI;RCA] [GO:0010029 "regulation of seed
germination" evidence=IGI] [GO:2000033 "regulation of seed dormancy
process" evidence=IGI] [GO:0010187 "negative regulation of seed
germination" evidence=IGI] [GO:0010218 "response to far red light"
evidence=IEP] [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IGI] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0042176
"regulation of protein catabolic process" evidence=IMP] [GO:0006096
"glycolysis" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
"response to temperature stimulus" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0046686
"response to cadmium ion" evidence=RCA] [GO:0048444 "floral organ
morphogenesis" evidence=RCA] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IGI]
Pfam:PF03514 GO:GO:0007275 GO:GO:0009737 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009723 GO:GO:0003700
GO:GO:0006351 GO:GO:0010218 GO:GO:0010187 GO:GO:0042176
GO:GO:0042538 EMBL:AC005560 GO:GO:2000377 GO:GO:0040029
GO:GO:0009867 GO:GO:0009740 eggNOG:NOG243696 HOGENOM:HOG000238577
KO:K14494 ProtClustDB:CLSN2682993 GO:GO:0009938 GO:GO:2000033
InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
EMBL:Y11336 EMBL:Y15194 EMBL:AY052239 EMBL:AY054160 EMBL:BT010467
IPI:IPI00523272 PIR:D84426 RefSeq:NP_178266.1 UniGene:At.24012
ProteinModelPortal:Q9SLH3 SMR:Q9SLH3 IntAct:Q9SLH3 STRING:Q9SLH3
PRIDE:Q9SLH3 EnsemblPlants:AT2G01570.1 GeneID:814686
KEGG:ath:AT2G01570 GeneFarm:4238 TAIR:At2g01570 InParanoid:Q9SLH3
OMA:VHALMAC PhylomeDB:Q9SLH3 Genevestigator:Q9SLH3
GermOnline:AT2G01570 Uniprot:Q9SLH3
Length = 587
Score = 289 (106.8 bits), Expect = 1.0e-24, P = 1.0e-24
Identities = 84/296 (28%), Positives = 139/296 (46%)
Query: 78 LKECARAISDKDSSKIHHLLWMLNELASPYGDCDQKLASYFLQALFCKATESGQRCYKTL 137
L CA AI + + L+ + LA +K+A+YF +AL +R Y+
Sbjct: 225 LMACAEAIQQNNLTLAEALVKQIGCLAVSQAGAMRKVATYFAEAL-------ARRIYRLS 277
Query: 138 TSVAEKSHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALDGETKLHIIDMSNTLCTQ 197
+ H L + F E P+ F H +N AILEA +G+ ++H+ID S Q
Sbjct: 278 PPQNQIDHCLSDT--LQMHFYETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGLQ 335
Query: 198 WPTLLEALATRNDETPHXXXXXXXXXX-XXXXXMKEIGQRMEKFARLMGVPFEFKVITGL 256
WP L++ALA R P + E+G ++ + A + V FE++
Sbjct: 336 WPALMQALALREGGPPTFRLTGIGPPAPDNSDHLHEVGCKLAQLAEAIHVEFEYRGFVA- 394
Query: 257 NRLVELTKGTLGVK--EDEAVAVNCIGALRRVAVEERGA--VIQMFQSLKPKVVTIVEEE 312
N L +L L ++ + EAVAVN + L ++ G V+ + + +KP + T+VE+E
Sbjct: 395 NSLADLDASMLELRPSDTEAVAVNSVFELHKLLGRPGGIEKVLGVVKQIKPVIFTVVEQE 454
Query: 313 ADLTSSRYDFVKCFEECLRFYTLYFEMLEESFVPTSNERLMLERECSRDIVRVLAC 368
++ F+ F E L +Y+ F+ LE VP S +++M E + I ++AC
Sbjct: 455 SNHNGPV--FLDRFTESLHYYSTLFDSLEG--VPNSQDKVMSEVYLGKQICNLVAC 506
>TAIR|locus:2157477 [details] [associations]
symbol:RGL3 "RGA-like protein 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP;ISS] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;TAS] [GO:0009686 "gibberellin
biosynthetic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0048444 "floral
organ morphogenesis" evidence=RCA] Pfam:PF03514 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003700
GO:GO:0006351 GO:GO:0040029 EMBL:AL391150 GO:GO:0009740
HOGENOM:HOG000238577 KO:K14494 InterPro:IPR021914
InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
ProtClustDB:CLSN2684085 EMBL:AK117226 EMBL:BT005905 IPI:IPI00544591
PIR:T51475 RefSeq:NP_197251.1 UniGene:At.31541
ProteinModelPortal:Q9LF53 SMR:Q9LF53 PaxDb:Q9LF53 PRIDE:Q9LF53
EnsemblPlants:AT5G17490.1 GeneID:831615 KEGG:ath:AT5G17490
GeneFarm:4241 TAIR:At5g17490 eggNOG:NOG300920 InParanoid:Q9LF53
OMA:RRIYRIH PhylomeDB:Q9LF53 Genevestigator:Q9LF53
GermOnline:AT5G17490 Uniprot:Q9LF53
Length = 523
Score = 282 (104.3 bits), Expect = 4.1e-24, P = 4.1e-24
Identities = 85/294 (28%), Positives = 144/294 (48%)
Query: 78 LKECARAISDKDSSKIHHLLWMLNELASPYGDCDQKLASYFLQALFCKATESGQRCYKTL 137
L CA A+ ++ S L+ + LA+ K+A+YF +AL +R Y+
Sbjct: 161 LVACAEAVQLENLSLADALVKRVGLLAASQAGAMGKVATYFAEAL-------ARRIYRIH 213
Query: 138 TSVAEKSHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALDGETKLHIIDMSNTLCTQ 197
S A SF+ L + F + P+ F H +N AILEA+ +H+ID+ Q
Sbjct: 214 PSAAAIDPSFEEI--LQMNFYDSCPYLKFAHFTANQAILEAVTTSRVVHVIDLGLNQGMQ 271
Query: 198 WPTLLEALATRNDETPHXXXXXXXXXXXXXXXMKEIGQRMEKFARLMGVPFEFKVITGLN 257
WP L++ALA R P ++E+G ++ + A+ +GV F+F +T
Sbjct: 272 WPALMQALALRPGGPP-SFRLTGVGNPSNREGIQELGWKLAQLAQAIGVEFKFNGLT-TE 329
Query: 258 RLVELTKGTLGVK-EDEAVAVNCIGALRRVAVEERGAVIQMF---QSLKPKVVTIVEEEA 313
RL +L + E E + VN + L V + + G++ ++ +++KP +VT+VE+EA
Sbjct: 330 RLSDLEPDMFETRTESETLVVNSVFELHPV-LSQPGSIEKLLATVKAVKPGLVTVVEQEA 388
Query: 314 DLTSSRYDFVKCFEECLRFYTLYFEMLEESFVPTSNERLMLERECSRDIVRVLA 367
+ F+ F E L +Y+ F+ LE+ V S +R+M E R I+ ++A
Sbjct: 389 NHNGDV--FLDRFNEALHYYSSLFDSLEDGVVIPSQDRVMSEVYLGRQILNLVA 440
>TAIR|locus:2020487 [details] [associations]
symbol:LAS "AT1G55580" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010223 "secondary shoot formation" evidence=IMP]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC002328 GO:GO:0010223
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG323432 EMBL:AY196482 EMBL:BT026519 EMBL:EF598379
EMBL:EF598380 EMBL:EF598381 EMBL:EF598382 EMBL:EF598383
EMBL:EF598384 EMBL:EF598385 EMBL:EF598386 EMBL:EF598387
EMBL:EF598388 EMBL:EF598389 EMBL:EF598390 EMBL:EF598391
EMBL:EF598392 EMBL:EF598393 EMBL:EF598394 EMBL:EF598395
EMBL:EF598396 EMBL:EF598397 EMBL:EF598398 EMBL:EF598399
EMBL:EF598400 EMBL:EF598401 EMBL:EF598402 IPI:IPI00532485
RefSeq:NP_175954.1 UniGene:At.45199 STRING:Q9ZWC5
EnsemblPlants:AT1G55580.1 GeneID:842007 KEGG:ath:AT1G55580
GeneFarm:4247 TAIR:At1g55580 InParanoid:Q9ZWC5 OMA:EREANHG
PhylomeDB:Q9ZWC5 ProtClustDB:CLSN2682663 Genevestigator:Q9ZWC5
Uniprot:Q9ZWC5
Length = 445
Score = 240 (89.5 bits), Expect = 2.5e-23, Sum P(2) = 2.5e-23
Identities = 67/238 (28%), Positives = 117/238 (49%)
Query: 143 KSHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALDGETK--LHIIDMSNTLCTQWPT 200
K+++ D L +++P+ FGH+ +N AIL+A + LHI+D+ + QWP
Sbjct: 135 KNNNSDFESCYYLWLNQLTPFIRFGHLTANQAILDATETNDNGALHILDLDISQGLQWPP 194
Query: 201 LLEALATR--NDETPHXXXXXXXXXXXXXXXMKEIGQRMEKFARLMGVPFEFKVITGLNR 258
L++ALA R N +P + G R+ +FA +G+ F+F + +
Sbjct: 195 LMQALAERSSNPSSPPPSLRITGCGRDVTG-LNRTGDRLTRFADSLGLQFQFHTLVIVEE 253
Query: 259 -----LVELTKGTLGVKEDEAVAVNCIGALRRVAVEER---GAVIQMFQSLKPKVVTIVE 310
L+++ L + E +AVNC+ L ++ ++ G + +SL ++VT+ E
Sbjct: 254 DLAGLLLQIRLLALSAVQGETIAVNCVHFLHKIFNDDGDMIGHFLSAIKSLNSRIVTMAE 313
Query: 311 EEADLTSSRYDFVKCFEECLRFYTLYFEMLEESFVPTSNERLMLE-RECSRDIVRVLA 367
EA+ + F+ F E + Y F+ LE + P S ERL LE R ++I+ V+A
Sbjct: 314 REAN--HGDHSFLNRFSEAVDHYMAIFDSLEATLPPNSRERLTLEQRWFGKEILDVVA 369
Score = 65 (27.9 bits), Expect = 2.5e-23, Sum P(2) = 2.5e-23
Identities = 17/64 (26%), Positives = 31/64 (48%)
Query: 68 TGGNKWASKLLKECARAISDKDSSKIHHLLWMLNELASPYGDCDQKLASYFLQALFCKAT 127
T + +LL A +S + + +LL +L+ +SP+GD ++L F +AL +
Sbjct: 35 TSASHHLRRLLFTAANFVSQSNFTAAQNLLSILSLNSSPHGDSTERLVHLFTKALSVRIN 94
Query: 128 ESGQ 131
Q
Sbjct: 95 RQQQ 98
>TAIR|locus:2101694 [details] [associations]
symbol:AT3G50650 "AT3G50650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132979
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000240374
ProtClustDB:CLSN2684429 EMBL:AK229252 EMBL:AF036304 IPI:IPI00542878
PIR:T46142 PIR:T51238 RefSeq:NP_190634.1 UniGene:At.42939
PaxDb:Q9SCR0 PRIDE:Q9SCR0 EnsemblPlants:AT3G50650.1 GeneID:824228
KEGG:ath:AT3G50650 GeneFarm:4248 TAIR:At3g50650 eggNOG:NOG329237
InParanoid:Q9SCR0 OMA:LIRIKES PhylomeDB:Q9SCR0
Genevestigator:Q9SCR0 Uniprot:Q9SCR0
Length = 542
Score = 256 (95.2 bits), Expect = 3.2e-21, P = 3.2e-21
Identities = 85/284 (29%), Positives = 131/284 (46%)
Query: 83 RAISD---KDSSKIHHLLWMLNELASPYGDCDQKLASYFLQALFCKATESGQRCYKTLTS 139
+AI D K +K L+ + E S GD Q++ YF +AL K TES +S
Sbjct: 179 KAIHDYARKPETKPDTLI-RIKESVSESGDPIQRVGYYFAEALSHKETESPS------SS 231
Query: 140 VAEKSHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALDGETKLHIIDMSNTLCTQWP 199
+ F + K + + P++ F H+ +N AILEA + +HI+D QW
Sbjct: 232 SSSSLEDFILSYKTL---NDACPYSKFAHLTANQAILEATNQSNNIHIVDFGIFQGIQWS 288
Query: 200 TLLEALATRNDETPHXXXXXXXXXXXXXXX----MKEIGQRMEKFARLMGVPFEFKVITG 255
LL+ALATR+ P + G R+ FA ++ + FEF +
Sbjct: 289 ALLQALATRSSGKPTRIRISGIPAPSLGDSPGPSLIATGNRLRDFAAILDLNFEFYPV-- 346
Query: 256 LNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEER---GAVIQMFQSLKPKVVTIVEEE 312
L + L + V DE + VN + L ++ E G +++ +SL P++VT+ E E
Sbjct: 347 LTPIQLLNGSSFRVDPDEVLVVNFMLELYKLLDETATTVGTALRLARSLNPRIVTLGEYE 406
Query: 313 ADLTSSRYDFVKCFEECLRFYTLYFEMLEESFVPTSNERLMLER 356
L +R +F + LRFY+ FE LE + S ERL +ER
Sbjct: 407 VSL--NRVEFANRVKNSLRFYSAVFESLEPNLDRDSKERLRVER 448
>TAIR|locus:2008086 [details] [associations]
symbol:SCL3 "AT1G50420" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
GO:GO:0009739 EMBL:AC012561 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY056154 EMBL:AY091260 EMBL:AF036301
IPI:IPI00539428 PIR:E96540 PIR:T51235 RefSeq:NP_175459.1
UniGene:At.14826 IntAct:Q9LPR8 STRING:Q9LPR8
EnsemblPlants:AT1G50420.1 GeneID:841464 KEGG:ath:AT1G50420
GeneFarm:4258 TAIR:At1g50420 eggNOG:NOG310008 InParanoid:Q9LPR8
OMA:MVHVIDL PhylomeDB:Q9LPR8 ProtClustDB:CLSN2913643
Genevestigator:Q9LPR8 Uniprot:Q9LPR8
Length = 482
Score = 224 (83.9 bits), Expect = 7.4e-21, Sum P(2) = 7.4e-21
Identities = 59/204 (28%), Positives = 103/204 (50%)
Query: 77 LLKECARAISDKDSSKIHHLLWMLNELASPYGDCDQKLASYFLQALFCKATESGQRCYKT 136
LL CA ++ + L L+ LASP GD Q++A+YF +AL + +S YK
Sbjct: 57 LLLTCANHVASGSLQNANAALEQLSHLASPDGDTMQRIAAYFTEALANRILKSWPGLYKA 116
Query: 137 LTSVAEKSHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALDGETKLHIIDMSNTLCT 196
L + ++++ + F E+ P ++ +N AILEA++GE +H+ID+ +
Sbjct: 117 LNATQTRTNNVSEEIHVRRLFFEMFPILKVSYLLTNRAILEAMEGEKMVHVIDLDASEPA 176
Query: 197 QWPTLLEALATRNDETPHXXXXXXXXXXXXXXXMKEIGQRMEKFARLMGVPFEFKVITGL 256
QW LL+A +R + PH ++++ R+ + A + +PF+F + +
Sbjct: 177 QWLALLQAFNSRPEGPPHLRITGVHHQKEV---LEQMAHRLIEEAEKLDIPFQFNPV--V 231
Query: 257 NRLVELTKGTLGVKEDEAVAVNCI 280
+RL L L VK EA+AV+ +
Sbjct: 232 SRLDCLNVEQLRVKTGEALAVSSV 255
Score = 76 (31.8 bits), Expect = 7.4e-21, Sum P(2) = 7.4e-21
Identities = 19/69 (27%), Positives = 35/69 (50%)
Query: 301 LKPKVVTIVEEEADLTSSRYDFVKCFEECLRFYTLYFEMLEESFVPTSNERLMLEREC-S 359
L PKV+ + E+++D S ++ E L Y F+ LE TS +R+ +E+
Sbjct: 339 LSPKVMVVTEQDSDHNGST--LMERLLESLYTYAALFDCLETKVPRTSQDRIKVEKMLFG 396
Query: 360 RDIVRVLAC 368
+I +++C
Sbjct: 397 EEIKNIISC 405
>TAIR|locus:2040701 [details] [associations]
symbol:AT2G37650 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] EMBL:AC004684 Pfam:PF03514 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
eggNOG:NOG319005 EMBL:AF036306 IPI:IPI00536640 PIR:T02531
PIR:T51240 RefSeq:NP_181301.1 UniGene:At.26205 UniGene:At.66411
PaxDb:O80933 PRIDE:O80933 EnsemblPlants:AT2G37650.1 GeneID:818342
KEGG:ath:AT2G37650 GeneFarm:4256 TAIR:At2g37650 InParanoid:O80933
OMA:WERVERP PhylomeDB:O80933 ProtClustDB:CLSN2912903
Genevestigator:O80933 Uniprot:O80933
Length = 718
Score = 253 (94.1 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 81/304 (26%), Positives = 133/304 (43%)
Query: 77 LLKECARAISDKDSSKIHHLLWMLNELASPYGDCDQKLASYFLQALFCKATESGQRCYKT 136
LL CA+A++ D LL + ++P+GD +Q+LA F L + +G + YK
Sbjct: 347 LLIHCAQAVAADDRRCAGQLLKQIRLHSTPFGDGNQRLAHCFANGLEARLAGTGSQIYKG 406
Query: 137 LTSVAEKSHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALDGETKLHIIDMSNTLCT 196
+ S + + A +L L P+ + +N I + + ++H+ID
Sbjct: 407 IVSKPRSAAAVLKAHQLFLA---CCPFRKLSYFITNKTIRDLVGNSQRVHVIDFGILYGF 463
Query: 197 QWPTLLEALATRNDETPHXXXXXXXXXXXX-XXXMKEIGQRMEKFARLMGVPFEFKVITG 255
QWPTL+ + ++E GQR+ +A+L GVPFE+K I
Sbjct: 464 QWPTLIHRFSMYGSPKVRITGIEFPQPGFRPAQRVEETGQRLAAYAKLFGVPFEYKAIAK 523
Query: 256 LNRLVELTKGTLGVKEDEAVAVNCIGALRR-----VAVEE-RGAVIQMFQSLKPKVVTIV 309
++L L + DE VNC+ V VE R V+ + + P +
Sbjct: 524 KWDAIQLED--LDIDRDEITVVNCLYRAENLHDESVKVESCRDTVLNLIGKINPDLFVF- 580
Query: 310 EEEADLTSSRYD---FVKCFEECLRFYTLYFEMLEESFVPTSNE-RLMLEREC-SRDIVR 364
+ + Y+ FV F E L ++ F+MLE + VP +E R+ LE E R+ +
Sbjct: 581 ----GIVNGAYNAPFFVTRFREALFHFSSIFDMLE-TIVPREDEERMFLEMEVFGREALN 635
Query: 365 VLAC 368
V+AC
Sbjct: 636 VIAC 639
>UNIPROTKB|Q84MM9 [details] [associations]
symbol:MOC1 "Protein MONOCULM 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0010014 "meristem initiation" evidence=IMP] Pfam:PF03514
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY242058 EMBL:AP003616 Gramene:Q84MM9
eggNOG:NOG323432 GO:GO:0010014 Uniprot:Q84MM9
Length = 441
Score = 188 (71.2 bits), Expect = 6.5e-20, Sum P(2) = 6.5e-20
Identities = 46/152 (30%), Positives = 72/152 (47%)
Query: 99 MLNELASPYGDCDQKLASYFLQALFCKATESGQRCYKTLTSVAEKSHSFDSARKLILKFQ 158
+L ASP GD +LA +F +AL + + + A + S + L F
Sbjct: 76 VLAAAASPRGDAADRLAYHFARALALRVDAKAGHGHVVVGGGAARPASSGA----YLAFN 131
Query: 159 EVSPWTTFGHVASNGAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHXXXX 218
+++P+ F H+ +N AILEA+DG ++HI+D+ QWP LL+A+A R D
Sbjct: 132 QIAPFLRFAHLTANQAILEAVDGARRVHILDLDAVHGVQWPPLLQAIAERADPALGPPEV 191
Query: 219 XXXXXXXXXXXMKEIGQRMEKFARLMGVPFEF 250
+ G R+ FAR + +PF F
Sbjct: 192 RVTGAGADRDTLLRTGNRLRAFARSIHLPFHF 223
Score = 112 (44.5 bits), Expect = 6.5e-20, Sum P(2) = 6.5e-20
Identities = 33/97 (34%), Positives = 49/97 (50%)
Query: 272 DEAVAVNCIGALRRVAV-EERGAVIQMFQSLKPKVVTIVEEEADLTSSRYDFVKCFEE-- 328
DE +AVNC+ L +A +E A ++ +++ P VVTI E EA D +
Sbjct: 263 DETLAVNCVMFLHNLAGHDELAAFLKWVKAMSPAVVTIAEREAGGGGGGGDHIDDLPRRV 322
Query: 329 --CLRFYTLYFEMLEESFVPTSNERLMLEREC-SRDI 362
+ Y+ FE LE + P S ERL +E+E R+I
Sbjct: 323 GVAMDHYSAVFEALEATVPPGSRERLAVEQEVLGREI 359
>TAIR|locus:2025022 [details] [associations]
symbol:SCL14 "SCARECROW-like 14" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009410 "response to xenobiotic stimulus" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005634 GO:GO:0045893 GO:GO:0003700
GO:GO:0006351 GO:GO:0009410 EMBL:AC022464 InterPro:IPR005202
PROSITE:PS50985 HOGENOM:HOG000238576 EMBL:AF036309 IPI:IPI00525012
PIR:T51232 RefSeq:NP_172233.1 UniGene:At.21921 STRING:Q9XE58
PaxDb:Q9XE58 PRIDE:Q9XE58 EnsemblPlants:AT1G07530.1 GeneID:837267
KEGG:ath:AT1G07530 GeneFarm:4250 TAIR:At1g07530 eggNOG:NOG319005
OMA:HEDFVVD PhylomeDB:Q9XE58 Genevestigator:Q9XE58 Uniprot:Q9XE58
Length = 769
Score = 242 (90.2 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 79/306 (25%), Positives = 137/306 (44%)
Query: 77 LLKECARAISDKDSSKIHHLLWMLNELASPYGDCDQKLASYFLQALFCKATESGQRCYKT 136
LL CA+A+S D + +L + E +SP G+ ++LA YF +L + +G + Y
Sbjct: 396 LLVLCAQAVSVDDRRTANEMLRQIREHSSPLGNGSERLAHYFANSLEARLAGTGTQIYTA 455
Query: 137 LTSVAEKSHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALDGETKLHIIDMSNTLCT 196
L+S +K+ + D K + V P+ + +N +++ +HIID +
Sbjct: 456 LSS--KKTSAADML-KAYQTYMSVCPFKKAAIIFANHSMMRFTANANTIHIIDFGISYGF 512
Query: 197 QWPTLLEALA-TRNDETPHXXXXXXXXXXXX---XXXMKEIGQRMEKFARLMGVPFEFKV 252
QWP L+ L+ +R +P ++E G R+ ++ + VPFE+
Sbjct: 513 QWPALIHRLSLSRPGGSPKLRITGIELPQRGFRPAEGVQETGHRLARYCQRHNVPFEYNA 572
Query: 253 ITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEE------RGAVIQMFQSLKPKVV 306
I +++ L +++ E V VN + R + E R AV+++ + + P V
Sbjct: 573 IAQKWETIQVED--LKLRQGEYVVVNSLFRFRNLLDETVLVNSPRDAVLKLIRKINPNVF 630
Query: 307 TIVEEEADLTSSRYD---FVKCFEECLRFYTLYFEMLEESFVPTSNERLMLEREC-SRDI 362
+ S Y+ FV F E L Y+ F+M + RLM E+E R+I
Sbjct: 631 IPA-----ILSGNYNAPFFVTRFREALFHYSAVFDMCDSKLAREDEMRLMYEKEFYGREI 685
Query: 363 VRVLAC 368
V V+AC
Sbjct: 686 VNVVAC 691
>TAIR|locus:2148293 [details] [associations]
symbol:AT5G59450 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010200 "response to chitin" evidence=IEP;RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AB025604
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY035001 EMBL:AY062942
EMBL:AF036307 IPI:IPI00541926 PIR:T51233 RefSeq:NP_200753.1
UniGene:At.29225 UniGene:At.63919 UniGene:At.72775 STRING:Q9LTI5
EnsemblPlants:AT5G59450.1 GeneID:836064 KEGG:ath:AT5G59450
GeneFarm:4255 TAIR:At5g59450 eggNOG:NOG254902 HOGENOM:HOG000238576
InParanoid:Q9LTI5 OMA:KPATISK PhylomeDB:Q9LTI5
ProtClustDB:CLSN2685117 Genevestigator:Q9LTI5 Uniprot:Q9LTI5
Length = 610
Score = 239 (89.2 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 84/305 (27%), Positives = 133/305 (43%)
Query: 77 LLKECARAISDKDSSKIHHLLWMLNELASPYGDCDQKLASYFLQALFCKATESGQRCYKT 136
LL +CA+A++ D + L + +S GD Q+LA YF +AL + T G
Sbjct: 227 LLTQCAQAVASFDQRRATDKLKEIRAHSSSNGDGTQRLAFYFAEALEARIT--GNISPPV 284
Query: 137 LTSVAEKSHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALDGETKLHIIDMSNTLCT 196
+ S K F P + A+N +I E TKLHI+D
Sbjct: 285 SNPFPSSTTSMVDILKAYKLFVHTCPIYVTDYFAANKSIYELAMKATKLHIVDFGVLYGF 344
Query: 197 QWPTLLEALATRNDETPHXXXXXXXXXXXX---XXXMKEIGQRMEKFARLMGVPFEFKVI 253
QWP LL AL+ R P ++E G+R+++F VPFEF I
Sbjct: 345 QWPCLLRALSKRPGGPPMLRVTGIELPQAGFRPSDRVEETGRRLKRFCDQFNVPFEFNFI 404
Query: 254 TGLNRLVELTKGTLGVKEDEAVAVNCIGALR-----RVAVEE-RGAVIQMFQSLKPKVVT 307
+ +T L + E VNCI L+ V+++ R V+++F+ + P +
Sbjct: 405 A--KKWETITLDELMINPGETTVVNCIHRLQYTPDETVSLDSPRDTVLKLFRDINPDLFV 462
Query: 308 IVEEEADLTSSRYDFVKCFEECLRFYTLYFEMLEESFVPTSNE---RLMLERECS-RDIV 363
E + +S + F+ F E L Y+ F+M + + + +E R +LERE RD +
Sbjct: 463 FAEING-MYNSPF-FMTRFREALFHYSSLFDMFDTT-IHAEDEYKNRSLLERELLVRDAM 519
Query: 364 RVLAC 368
V++C
Sbjct: 520 SVISC 524
>TAIR|locus:2075155 [details] [associations]
symbol:AT3G46600 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016671 "oxidoreductase
activity, acting on a sulfur group of donors, disulfide as
acceptor" evidence=IEA] [GO:0019538 "protein metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AL133314
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
ProtClustDB:CLSN2685117 EMBL:AK226419 EMBL:AY087418 IPI:IPI00537144
PIR:T45597 RefSeq:NP_190244.1 UniGene:At.595 STRING:Q9SNB8
EnsemblPlants:AT3G46600.1 GeneID:823813 KEGG:ath:AT3G46600
GeneFarm:4254 TAIR:At3g46600 eggNOG:NOG304481 InParanoid:Q9SNB8
OMA:FNESESQ PhylomeDB:Q9SNB8 Genevestigator:Q9SNB8 Uniprot:Q9SNB8
Length = 583
Score = 236 (88.1 bits), Expect = 5.7e-18, P = 5.7e-18
Identities = 80/302 (26%), Positives = 124/302 (41%)
Query: 77 LLKECARAISDKDSSKIHHLLWMLNELASPYGDCDQKLASYFLQALFCKATESGQRCYKT 136
LL +CA+A++ D + L + E +S +GD Q+L +F +AL + T + T
Sbjct: 212 LLMQCAQAVASFDQRRAFEKLKEIREHSSRHGDATQRLGYHFAEALEARITGT----MTT 267
Query: 137 LTSVAEKSHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALDGETKLHIIDMSNTLCT 196
S S K F + P + +N I E T LHIID
Sbjct: 268 PISATSSRTSMVDILKAYKGFVQACPTLIMCYFTANRTINELASKATTLHIIDFGILYGF 327
Query: 197 QWPTLLEALATRNDETPHXXXXXXXXXXXX---XXXMKEIGQRMEKFARLMGVPFEFKVI 253
QWP L++AL+ R+ P ++E G+R+++F VPFE+ I
Sbjct: 328 QWPCLIQALSKRDIGPPLLRVTGIELPQSGFRPSERVEETGRRLKRFCDKFNVPFEYSFI 387
Query: 254 TGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEE------RGAVIQMFQSLKPKVVT 307
+T L + E VNCI L+ E R +++F+ + P +
Sbjct: 388 A--KNWENITLDDLVINSGETTVVNCILRLQYTPDETVSLNSPRDTALKLFRDINPDLFV 445
Query: 308 IVEEEADLTSSRYDFVKCFEECLRFYTLYFEMLEESFVPTSNERLMLERECS-RDIVRVL 366
E S F+ F E L + F+M E + N R ++ERE RD + V+
Sbjct: 446 FAEINGTYNSPF--FLTRFREALFHCSSLFDMYETTLSEDDNCRTLVERELIIRDAMSVI 503
Query: 367 AC 368
AC
Sbjct: 504 AC 505
>TAIR|locus:2132482 [details] [associations]
symbol:AT4G08250 "AT4G08250" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AL080252 EMBL:AL161510
EMBL:BT011797 IPI:IPI00529829 PIR:T10552 RefSeq:NP_192565.1
UniGene:At.50325 DNASU:826375 EnsemblPlants:AT4G08250.1
GeneID:826375 KEGG:ath:AT4G08250 GeneFarm:4263 TAIR:At4g08250
eggNOG:NOG320032 HOGENOM:HOG000239937 InParanoid:Q9SUF5 OMA:SLEAGFP
PhylomeDB:Q9SUF5 ProtClustDB:CLSN2685964 Genevestigator:Q9SUF5
Uniprot:Q9SUF5
Length = 483
Score = 231 (86.4 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 86/310 (27%), Positives = 141/310 (45%)
Query: 61 GEPCADTTGGNKWASKLLKEC-ARAISDKDSSKIHHLLWMLNELASPYGDCD--QKLASY 117
GEP D + G + L+ A ++K +L L +L SP GD ++LA++
Sbjct: 92 GEPKTDESKGLRLVHLLVAAADASTGANKSRELTRVILARLKDLVSP-GDRTNMERLAAH 150
Query: 118 FLQALFCKATESGQRCYKTLTSVAEKSHSFDSARKLILKF---QEVSPWTTFGHVASNGA 174
F L K E L + +D A +I F Q +SP+ FG++ + A
Sbjct: 151 FTNGL-SKLLERDS----VLCPQQHRDDVYDQA-DVISAFELLQNMSPYVNFGYLTATQA 204
Query: 175 ILEALDGETKLHIIDMSNTLCTQWPTLLEALATRND--ETPHXXXXXXXXXXX---XXXX 229
ILEA+ E ++HI+D QW +L++AL +RN H
Sbjct: 205 ILEAVKYERRIHIVDYDINEGVQWASLMQALVSRNTGPSAQHLRITALSRATNGKKSVAA 264
Query: 230 MKEIGQRMEKFARLMGVPFEFKVITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVE 289
++E G+R+ FA +G PF ++ L+ T +L + EAV +NC+ L R + +
Sbjct: 265 VQETGRRLTAFADSIGQPFSYQHCK-LDTNAFSTS-SLKLVRGEAVVINCMLHLPRFSHQ 322
Query: 290 ERGAVIQMF---QSLKPKVVTIVEEEADLTSSRYDFVKCFEECLRFYTLYFEMLEESFVP 346
+VI ++L PK+VT+V EE L ++ F+ F + L ++ F+ LE
Sbjct: 323 TPSSVISFLSEAKTLNPKLVTLVHEEVGLMGNQ-GFLYRFMDLLHQFSAIFDSLEAGLSI 381
Query: 347 TSNERLMLER 356
+ R +ER
Sbjct: 382 ANPARGFVER 391
>TAIR|locus:2025032 [details] [associations]
symbol:AT1G07520 "AT1G07520" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006355 GO:GO:0006351 GO:GO:0010200 EMBL:AC022464
InterPro:IPR005202 PROSITE:PS50985 PIR:T51232 eggNOG:NOG319005
EMBL:AB493440 EMBL:BX839686 IPI:IPI00525480 IPI:IPI01019456
RefSeq:NP_172232.1 UniGene:At.63938 UniGene:At.71785 STRING:Q3EDH0
PRIDE:Q3EDH0 GeneID:837266 KEGG:ath:AT1G07520 GeneFarm:4253
TAIR:At1g07520 InParanoid:Q3EDH0 OMA:VRIENEV Genevestigator:Q3EDH0
Uniprot:Q3EDH0
Length = 695
Score = 228 (85.3 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 75/305 (24%), Positives = 132/305 (43%)
Query: 77 LLKECARAISDKDSSKIHHLLWMLNELASPYGDCDQKLASYFLQALFCKATES-GQRCYK 135
LL CA+++S D LL + + SP GD Q+LA +F AL + S G
Sbjct: 318 LLTLCAQSVSAGDKITADDLLRQIRKQCSPVGDASQRLAHFFANALEARLEGSTGTMIQS 377
Query: 136 TLTSVAEKSHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALDGETKLHIIDMSNTLC 195
S++ K + K F SP+ T + SN IL+A + LHI+D
Sbjct: 378 YYDSISSKKRTAAQILKSYSVFLSASPFMTLIYFFSNKMILDAAKDASVLHIVDFGILYG 437
Query: 196 TQWPTLLEALATRNDETPHXXXXXXXXXXXX---XXXMKEIGQRMEKFARLMGVPFEFKV 252
QWP ++ L+ N +++ G+R+ ++ + GVPFE+
Sbjct: 438 FQWPMFIQHLSKSNPGLRKLRITGIEIPQHGLRPTERIQDTGRRLTEYCKRFGVPFEYNA 497
Query: 253 ITGLN-RLVELTKGTLGVKEDEAVAVNCI---GALRRVAVEE----RGAVIQMFQSLKPK 304
I N +++ + ++ +E +AVN + LR V E R +++ + + P
Sbjct: 498 IASKNWETIKMEE--FKIRPNEVLAVNAVLRFKNLRDVIPGEEDCPRDGFLKLIRDMNPN 555
Query: 305 VVTIVEEEADLTSSRYDFVKCFEECLRFYTLYFEMLEESFVPTSNERLMLEREC-SRDIV 363
V + + + + F F+E L Y+ F++ + + ER+ E E R+++
Sbjct: 556 V--FLSSTVNGSFNAPFFTTRFKEALFHYSALFDLFGATLSKENPERIHFEGEFYGREVM 613
Query: 364 RVLAC 368
V+AC
Sbjct: 614 NVIAC 618
>TAIR|locus:2184625 [details] [associations]
symbol:SCL8 "AT5G52510" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
Pfam:PF03514 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AP000378 EMBL:AF036305
EMBL:AY099686 EMBL:AY128868 IPI:IPI00531227 PIR:T51239
RefSeq:NP_200064.3 UniGene:At.22412 UniGene:At.71617 STRING:Q9FYR7
PRIDE:Q9FYR7 EnsemblPlants:AT5G52510.1 GeneID:835327
KEGG:ath:AT5G52510 GeneFarm:4234 TAIR:At5g52510 eggNOG:NOG240925
HOGENOM:HOG000239354 InParanoid:Q9FYR7 OMA:PGAPWRD PhylomeDB:Q9FYR7
ProtClustDB:CLSN2680518 Genevestigator:Q9FYR7 Uniprot:Q9FYR7
Length = 640
Score = 164 (62.8 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 44/145 (30%), Positives = 73/145 (50%)
Query: 230 MKEIGQRMEKFARLMGVPFEFKVITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVE 289
+K +G + + +G+ F V+T L RL +L + +LG DE +AVN L RV E
Sbjct: 426 LKAVGDLLSQLGDRLGISVSFNVVTSL-RLGDLNRESLGCDPDETLAVNLAFKLYRVPDE 484
Query: 290 E------RGAVIQMFQSLKPKVVTIVEEEADLTSSRYDFVKCFEECLRFYTLYFEMLEES 343
R +++ + LKP+VVT+VE+E + S+ F+ E Y E +E +
Sbjct: 485 SVCTENPRDELLRRVKGLKPRVVTLVEQE--MNSNTAPFLGRVSESCACYGALLESVEST 542
Query: 344 FVPTSNERLMLERECSRDIVRVLAC 368
T+++R +E R +V +AC
Sbjct: 543 VPSTNSDRAKVEEGIGRKLVNAVAC 567
Score = 74 (31.1 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 37/152 (24%), Positives = 68/152 (44%)
Query: 63 PCADTTGGNKWASKLLKECARAISDKDSSKIHHLLWMLNELASPYGDCDQKLASYFLQAL 122
P +T + + + + E A AI++ + +L +++ + + ++KL + + AL
Sbjct: 254 PSTASTTTSVCSRQTVMEIATAIAEGKTEIATEILARVSQTPNLERNSEEKLVDFMVAAL 313
Query: 123 FCKATESGQRCYKTLTSVAEKSHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALD-- 180
R +T + K H + +L+ E+SP G A+N AIL+A D
Sbjct: 314 -------RSRIASPVTELYGKEHLIST--QLLY---ELSPCFKLGFEAANLAILDAADNN 361
Query: 181 -GETKL-HIIDMSNTLCTQWPTLLEALATRND 210
G + H+ID Q+ LL L+TR +
Sbjct: 362 DGGMMIPHVIDFDIGEGGQYVNLLRTLSTRRN 393
>TAIR|locus:2126901 [details] [associations]
symbol:HAM3 "AT4G00150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010492 "maintenance of shoot apical meristem identity"
evidence=IGI] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048768 "root hair cell tip growth" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=IEP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0051301 GO:GO:0007623 GO:GO:0003700
GO:GO:0006351 GO:GO:0048768 GO:GO:0010492 EMBL:AL161471
EMBL:AF069299 InterPro:IPR005202 PROSITE:PS50985
HOGENOM:HOG000239326 eggNOG:NOG320780 EMBL:AF462831 EMBL:AY133537
EMBL:AF036303 EMBL:EU550755 EMBL:EU550756 EMBL:EU550757
EMBL:EU550758 EMBL:EU550759 EMBL:EU550760 EMBL:EU550761
EMBL:EU550762 EMBL:EU550763 EMBL:EU550764 EMBL:EU550765
EMBL:EU550766 EMBL:EU550767 EMBL:EU550768 EMBL:EU550769
EMBL:EU550770 EMBL:EU550771 EMBL:EU550772 EMBL:EU550773
EMBL:EU550774 EMBL:EU550775 EMBL:EU550776 EMBL:EU550777
IPI:IPI00542979 PIR:T01343 PIR:T51237 RefSeq:NP_191926.1
UniGene:At.3732 UniGene:At.67226 IntAct:O81316
EnsemblPlants:AT4G00150.1 GeneID:828208 KEGG:ath:AT4G00150
GeneFarm:4228 TAIR:At4g00150 InParanoid:O81316 OMA:KTPPWRA
PhylomeDB:O81316 ProtClustDB:CLSN2916162 Genevestigator:O81316
Uniprot:O81316
Length = 558
Score = 148 (57.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 64/266 (24%), Positives = 113/266 (42%)
Query: 82 ARAISDKDSSKIHHLLWMLNE-LASPYGDCDQKLASYFLQALFCKATESGQRCYKTLTSV 140
A + + D+ +L LN+ L+SP G ++ A YF +AL L +V
Sbjct: 212 AAEVIESDTCLAQGILARLNQQLSSPVGKPLERAAFYFKEAL-----------NNLLHNV 260
Query: 141 AEKSHSFDSARKLIL--KFQEVSPWTTFGHVASNGAILEALDGETKLHIIDMSNTLCTQW 198
++ + + K+ F E+SP F + SN A+LE+ G +LHIID QW
Sbjct: 261 SQTLNPYSLIFKIAAYKSFSEISPVLQFANFTSNQALLESFHGFHRLHIIDFDIGYGGQW 320
Query: 199 PTLLEALATRNDETPHXXXXXXXXXXXXXXXMKEIG---QRMEKFARLMGVPFEFKVITG 255
+L++ L R++ P + E+G ++ FA + + + +V++
Sbjct: 321 ASLMQELVLRDNAAPLSLKITVFASPANHDQL-ELGFTQDNLKHFASEINISLDIQVLS- 378
Query: 256 LNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMFQSLKPKVVTIVEEEADL 315
L+ L ++ E EAVAVN A + V++ + L P ++ + +
Sbjct: 379 LDLLGSISWPNSS--EKEAVAVNISAA----SFSHLPLVLRFVKHLSPTIIVCSDRGCER 432
Query: 316 TSSRYDFVKCFEECLRFYTLYFEMLE 341
T F + L +T FE L+
Sbjct: 433 TD--LPFSQQLAHSLHSHTALFESLD 456
>TAIR|locus:2101801 [details] [associations]
symbol:HAM2 "AT3G60630" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] [GO:0007020 "microtubule
nucleation" evidence=RCA] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0051301 GO:GO:0003700 GO:GO:0006351
GO:GO:0048768 GO:GO:0010492 EMBL:AL162295 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY064062 EMBL:AY096372 EMBL:EU550731
EMBL:EU550732 EMBL:EU550733 EMBL:EU550734 EMBL:EU550735
EMBL:EU550736 EMBL:EU550737 EMBL:EU550738 EMBL:EU550739
EMBL:EU550740 EMBL:EU550741 EMBL:EU550742 EMBL:EU550743
EMBL:EU550744 EMBL:EU550745 EMBL:EU550746 EMBL:EU550747
EMBL:EU550748 EMBL:EU550749 EMBL:EU550750 EMBL:EU550752
EMBL:EU550754 EMBL:EU550751 EMBL:EU550753 IPI:IPI00520916
PIR:T47874 RefSeq:NP_191622.1 UniGene:At.27084 IntAct:Q9M000
EnsemblPlants:AT3G60630.1 GeneID:825234 KEGG:ath:AT3G60630
GeneFarm:4227 TAIR:At3g60630 eggNOG:NOG261649 HOGENOM:HOG000239326
InParanoid:Q9M000 OMA:ANQTILE PhylomeDB:Q9M000
ProtClustDB:CLSN2683334 Genevestigator:Q9M000 Uniprot:Q9M000
Length = 623
Score = 146 (56.5 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 49/218 (22%), Positives = 90/218 (41%)
Query: 157 FQEVSPWTTFGHVASNGAILEALDGETKLHIIDMSNTLCTQWPTLLEALA---TRNDETP 213
F E SP+ F + +N ILE+ +G ++HI+D QW +L++ LA R+ P
Sbjct: 333 FSETSPFLQFVNFTANQTILESFEGFDRIHIVDFDIGYGGQWASLIQELAGKRNRSSSAP 392
Query: 214 HXXXXXXXXXXXXXXX--MKEIGQRMEKFARLMGVPFEFKVITGLNRLVELTKGTLGV-- 269
++ + + FA GV FE +++ + L+ T L +
Sbjct: 393 SLKITAFASPSTVSDEFELRFTEENLRSFAGETGVSFEIELLN-MEILLNPTYWPLSLFR 451
Query: 270 -KEDEAVAVNCIGALRRVAVEERGAVIQMFQSLKPKVVTIVEEEADLTSSRYDFVKCFEE 328
E EA+AVN + + +++ + + P VV + D + F
Sbjct: 452 SSEKEAIAVNL--PISSMVSGYLPLILRFLKQISPNVVVCSDRSCDRNNDA-PFPNGVIN 508
Query: 329 CLRFYTLYFEMLEESFVPTSNERLMLERECSRDIVRVL 366
L++YT E L+ + + +ER C + ++ L
Sbjct: 509 ALQYYTSLLESLDSGNLNNAEAATSIERFCVQPSIQKL 546
>TAIR|locus:2115340 [details] [associations]
symbol:HAM4 "AT4G36710" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048831 "regulation of shoot system development" evidence=IGI]
Pfam:PF03514 GO:GO:0005634 GO:GO:0030154 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0048831
EMBL:AL161589 EMBL:Z99708 InterPro:IPR005202 PROSITE:PS50985
EMBL:AK118497 IPI:IPI00538111 PIR:E85433 RefSeq:NP_195389.4
UniGene:At.31304 PaxDb:O23210 PRIDE:O23210 DNASU:829824
EnsemblPlants:AT4G36710.1 GeneID:829824 KEGG:ath:AT4G36710
GeneFarm:4264 TAIR:At4g36710 eggNOG:NOG271584 HOGENOM:HOG000090733
InParanoid:O23210 OMA:ELVLCWH ProtClustDB:CLSN2717261
Genevestigator:O23210 Uniprot:O23210
Length = 486
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 60/260 (23%), Positives = 113/260 (43%)
Query: 96 LLWMLNE-LASPYGDCDQKLASYFLQALFCKATESGQRCYKTLTSVAEKSHSFDSARKLI 154
+L LN+ L SP G Q+ A YF +AL T S + + L+S +E + I
Sbjct: 144 VLSRLNQRLRSPAGRPLQRAAFYFKEALGSFLTGSNRNPIR-LSSWSEIVQRI----RAI 198
Query: 155 LKFQEVSPWTTFGHVASNGAILEALDGETK---LHIIDMSNTLCTQWPTLLEALATRNDE 211
++ +SP F H +N AIL++L ++ +H++D Q+ +L+ + T
Sbjct: 199 KEYSGISPIPLFSHFTANQAILDSLSSQSSSPFVHVVDFEIGFGGQYASLMREI-TEKSV 257
Query: 212 TPHXXXXXXXXXXXXXXXMKEIGQRMEKFARLMGVPFEFKVITGLNRLVELT--KGTLGV 269
+ + + + + +FA M + F+ + + L + E+ K V
Sbjct: 258 SGGFLRVTAVVAEECAVETRLVKENLTQFAAEMKIRFQIEFV--LMKTFEMLSFKAIRFV 315
Query: 270 KEDEAVAVNCIGALRRVA-VEERGAVIQMFQSLKPKVVTIVEEEA--DLTSSRYDFVKCF 326
+ + V + RR++ + + + + + PKVV V+ E ++ S F + F
Sbjct: 316 EGERTVVLISPAIFRRLSGITD---FVNNLRRVSPKVVVFVDSEGWTEIAGSG-SFRREF 371
Query: 327 EECLRFYTLYFEMLEESFVP 346
L FYT+ E L+ + P
Sbjct: 372 VSALEFYTMVLESLDAAAPP 391
>UNIPROTKB|Q6DLS1 [details] [associations]
symbol:SCL1 "SCARECROW-like protein" species:3708 "Brassica
napus" [GO:0005515 "protein binding" evidence=IPI] Pfam:PF03514
GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202 PROSITE:PS50985
EMBL:AY664405 IntAct:Q6DLS1 Uniprot:Q6DLS1
Length = 461
Score = 128 (50.1 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 64/284 (22%), Positives = 120/284 (42%)
Query: 78 LKECARAISDKDSSKIH--HL-LWMLNE-LASPYGDCDQKLASYFLQALFCKATESGQRC 133
+++ R + +S ++H H+ L LN+ L + G Q+ A YF +AL T + +
Sbjct: 100 IEDLIRVVDCIESDELHLAHVVLSQLNQRLQTSAGRPLQRAAFYFKEALGSLLTGTNRNQ 159
Query: 134 YKTLTSVAEKSHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALDGETK---LHIIDM 190
+ + + +K + I +F +SP F H +N AIL++L ++ +H++D
Sbjct: 160 LFSWSDIVQKIRA-------IKEFSGISPIPLFSHFTANQAILDSLSSQSSSPFVHVVDF 212
Query: 191 SNTLCTQWPTLLEALATRNDETPHXXXXXXXXXXXXXXXMKEIGQRMEKFARLMGVPFEF 250
Q+ +L+ +A ++ + + + + +FA M + F+
Sbjct: 213 EIGFGGQYASLMREIAEKSANGGFLRVTAVVAEDCAVET-RLVKENLTQFAAEMKIRFQI 271
Query: 251 KVITGLNRLVELT--KGTLGVKEDEAVAVNCIGALRRV-AVEERGAVIQMFQSLKPKVVT 307
+ + L + E+ K V + V + RRV + E + + P VV
Sbjct: 272 EFV--LMKTFEILSFKAIRFVDGERTVVLISPAIFRRVIGIAE---FVNNLGRVSPNVVV 326
Query: 308 IVEEE-----ADLTSSRYDFVKCFEECLRFYTLYFEMLEESFVP 346
V+ E A S R +FV FE FYT+ E L+ + P
Sbjct: 327 FVDSEGCTETAGSGSFRREFVSAFE----FYTMVLESLDAAAPP 366
>TAIR|locus:1009023400 [details] [associations]
symbol:AT5G67411 "AT5G67411" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0006351 EMBL:AB007645
InterPro:IPR005202 PROSITE:PS50985 EMBL:DQ487622 IPI:IPI00657013
RefSeq:NP_001032167.1 UniGene:At.65711 EnsemblPlants:AT5G67411.1
GeneID:3771574 KEGG:ath:AT5G67411 TAIR:At5g67411 eggNOG:NOG309215
PhylomeDB:Q2V2T9 Genevestigator:Q2V2T9 Uniprot:Q2V2T9
Length = 202
Score = 115 (45.5 bits), Expect = 0.00012, P = 0.00012
Identities = 38/147 (25%), Positives = 70/147 (47%)
Query: 231 KEIGQRMEKFARLMGVPFEFKVIT-----GLNRLVELTKGTLGVKEDEAVAVNCIGALRR 285
+E+G ++ FA V EF++I+ GL+ L+E + V +EA+ VNC L
Sbjct: 44 EELGSKLVNFATTRNVAMEFRIISSSYSDGLSSLIEQLRIDPFVF-NEALVVNCHMMLHY 102
Query: 286 VAVEE-----RGAVIQMFQSLKPKVVTIVEEEADLTSSRYDFVKCFEECLRFYTLYFEML 340
+ E R ++ + L P +VT+++E++D TS+ +F+ + + ++
Sbjct: 103 IPDEILTSNLRSVFLKELRDLNPTIVTLIDEDSDFTST--NFISRLRSLYNYMWIPYDTA 160
Query: 341 EESFVPTSNERLMLERECSRDIVRVLA 367
E S +R E + S I V+A
Sbjct: 161 EMFLTRGSEQRQWYEADISWKIDNVVA 187
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.133 0.397 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 386 330 0.00089 116 3 11 22 0.37 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 32
No. of states in DFA: 617 (66 KB)
Total size of DFA: 231 KB (2126 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.28u 0.10s 23.38t Elapsed: 00:00:01
Total cpu time: 23.29u 0.10s 23.39t Elapsed: 00:00:01
Start: Sat May 11 00:15:25 2013 End: Sat May 11 00:15:26 2013