Query 047247
Match_columns 386
No_of_seqs 134 out of 674
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 16:01:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047247.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047247hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gek_A TRNA (CMO5U34)-methyltr 96.6 0.069 2.3E-06 50.0 16.1 105 185-312 72-180 (261)
2 3htx_A HEN1; HEN1, small RNA m 95.7 0.06 2.1E-06 59.0 11.8 124 175-315 713-839 (950)
3 3dlc_A Putative S-adenosyl-L-m 94.8 0.2 7E-06 43.6 10.5 112 172-310 33-147 (219)
4 3dtn_A Putative methyltransfer 94.7 0.15 5.1E-06 45.5 9.6 112 173-309 33-146 (234)
5 1vl5_A Unknown conserved prote 94.4 0.74 2.5E-05 41.7 13.7 109 175-309 29-138 (260)
6 3jwg_A HEN1, methyltransferase 94.2 0.16 5.5E-06 44.9 8.6 119 175-316 21-146 (219)
7 3m70_A Tellurite resistance pr 94.2 0.33 1.1E-05 44.8 11.0 111 173-309 110-221 (286)
8 2r3s_A Uncharacterized protein 93.9 0.54 1.9E-05 44.3 12.2 117 173-314 153-275 (335)
9 3dh0_A SAM dependent methyltra 93.9 0.76 2.6E-05 40.2 12.3 113 173-309 27-141 (219)
10 3kkz_A Uncharacterized protein 93.7 0.83 2.8E-05 41.6 12.6 111 172-309 34-148 (267)
11 1kpg_A CFA synthase;, cyclopro 93.6 0.37 1.2E-05 44.5 10.2 111 174-309 55-166 (287)
12 2xvm_A Tellurite resistance pr 93.4 0.69 2.4E-05 39.6 11.0 109 174-308 23-133 (199)
13 3jwh_A HEN1; methyltransferase 93.0 0.36 1.2E-05 42.6 8.6 107 183-312 29-142 (217)
14 3g5l_A Putative S-adenosylmeth 92.9 1.6 5.5E-05 39.2 13.1 113 170-310 31-144 (253)
15 3hnr_A Probable methyltransfer 92.6 0.5 1.7E-05 41.5 9.1 108 173-309 35-143 (220)
16 2aot_A HMT, histamine N-methyl 92.4 0.57 1.9E-05 43.7 9.5 115 182-309 51-170 (292)
17 3dp7_A SAM-dependent methyltra 92.4 2.7 9.3E-05 40.5 14.7 118 174-314 170-291 (363)
18 1qzz_A RDMB, aclacinomycin-10- 92.3 1 3.5E-05 43.3 11.5 113 173-311 172-288 (374)
19 3frh_A 16S rRNA methylase; met 92.3 0.24 8.3E-06 46.7 6.7 124 184-341 106-229 (253)
20 3f4k_A Putative methyltransfer 92.1 1.5 5E-05 39.4 11.8 114 170-310 32-149 (257)
21 1x19_A CRTF-related protein; m 91.9 0.63 2.1E-05 44.8 9.5 116 172-313 179-298 (359)
22 3g2m_A PCZA361.24; SAM-depende 91.5 0.55 1.9E-05 43.8 8.3 114 174-310 74-189 (299)
23 2o57_A Putative sarcosine dime 91.4 1.8 6E-05 40.0 11.7 102 182-309 81-185 (297)
24 3g5t_A Trans-aconitate 3-methy 91.4 1.4 4.7E-05 41.0 11.0 111 182-309 35-147 (299)
25 3i53_A O-methyltransferase; CO 91.3 1.2 3.9E-05 42.3 10.6 113 174-312 160-276 (332)
26 3hem_A Cyclopropane-fatty-acyl 91.3 1.7 5.7E-05 40.5 11.5 112 173-309 62-181 (302)
27 3ujc_A Phosphoethanolamine N-m 91.1 0.81 2.8E-05 41.1 8.8 122 163-309 35-157 (266)
28 3bkx_A SAM-dependent methyltra 90.9 2.8 9.4E-05 38.0 12.3 125 173-317 33-166 (275)
29 1nkv_A Hypothetical protein YJ 90.8 1.5 5.1E-05 39.3 10.3 110 173-309 26-138 (256)
30 1xxl_A YCGJ protein; structura 90.7 5.4 0.00019 35.5 13.9 109 174-309 12-122 (239)
31 2vdw_A Vaccinia virus capping 90.6 3.3 0.00011 39.2 12.9 108 184-309 49-167 (302)
32 1dus_A MJ0882; hypothetical pr 90.5 2.7 9.4E-05 35.3 11.2 113 172-311 41-157 (194)
33 3ccf_A Cyclopropane-fatty-acyl 90.5 2.5 8.5E-05 38.7 11.7 105 174-310 48-153 (279)
34 3lcv_B Sisomicin-gentamicin re 90.4 2.5 8.4E-05 40.4 11.7 137 173-342 124-260 (281)
35 3h2b_A SAM-dependent methyltra 90.3 0.93 3.2E-05 39.2 8.2 97 184-309 42-139 (203)
36 2fk8_A Methoxy mycolic acid sy 90.0 2.8 9.4E-05 39.2 11.8 110 173-309 80-192 (318)
37 3thr_A Glycine N-methyltransfe 90.0 0.61 2.1E-05 43.0 7.1 118 175-310 49-174 (293)
38 2qe6_A Uncharacterized protein 90.0 12 0.00041 34.6 17.7 108 185-311 79-197 (274)
39 3ou2_A SAM-dependent methyltra 89.8 1.9 6.5E-05 37.3 9.8 108 172-309 34-144 (218)
40 3e23_A Uncharacterized protein 89.7 1.4 4.7E-05 38.5 8.8 96 184-310 44-140 (211)
41 3ofk_A Nodulation protein S; N 89.6 2.9 9.8E-05 36.4 10.9 109 174-309 42-152 (216)
42 1wzn_A SAM-dependent methyltra 89.6 3.9 0.00013 36.4 12.0 111 175-311 33-145 (252)
43 1xtp_A LMAJ004091AAA; SGPP, st 89.5 2.8 9.6E-05 37.3 11.0 114 173-311 83-197 (254)
44 3lcc_A Putative methyl chlorid 89.5 2.5 8.4E-05 37.5 10.5 99 185-309 68-169 (235)
45 3mgg_A Methyltransferase; NYSG 89.5 7.9 0.00027 35.0 14.2 103 182-309 36-140 (276)
46 3uwp_A Histone-lysine N-methyl 89.4 2.1 7.3E-05 43.3 10.9 121 172-309 162-286 (438)
47 4htf_A S-adenosylmethionine-de 89.3 3.5 0.00012 37.8 11.7 109 175-310 61-172 (285)
48 3bus_A REBM, methyltransferase 89.2 3.1 0.00011 37.6 11.2 111 173-309 51-164 (273)
49 3mcz_A O-methyltransferase; ad 89.1 1.6 5.4E-05 41.6 9.4 117 174-313 169-290 (352)
50 3sm3_A SAM-dependent methyltra 88.7 3.7 0.00013 35.8 11.0 105 184-313 31-144 (235)
51 4a6d_A Hydroxyindole O-methylt 88.4 0.89 3E-05 44.0 7.2 119 171-314 167-287 (353)
52 3fzg_A 16S rRNA methylase; met 88.4 0.94 3.2E-05 41.3 6.8 101 186-311 52-152 (200)
53 2p8j_A S-adenosylmethionine-de 88.4 2.8 9.6E-05 36.1 9.9 102 185-310 25-127 (209)
54 3gwz_A MMCR; methyltransferase 87.8 2.7 9.3E-05 40.6 10.3 116 173-314 192-311 (369)
55 3vc1_A Geranyl diphosphate 2-C 87.6 3.8 0.00013 38.3 10.9 110 173-309 106-219 (312)
56 3bgv_A MRNA CAP guanine-N7 met 87.4 8.3 0.00028 35.9 13.1 112 183-309 34-153 (313)
57 1ve3_A Hypothetical protein PH 87.3 4.5 0.00015 35.2 10.6 101 184-309 39-140 (227)
58 3u81_A Catechol O-methyltransf 86.9 1.5 5.2E-05 38.8 7.3 108 185-313 60-172 (221)
59 2yqz_A Hypothetical protein TT 86.7 6.5 0.00022 35.0 11.6 102 182-310 38-140 (263)
60 1tw3_A COMT, carminomycin 4-O- 86.4 3.8 0.00013 39.0 10.3 114 173-312 173-290 (360)
61 3e8s_A Putative SAM dependent 86.3 2.8 9.7E-05 36.3 8.7 43 171-222 40-82 (227)
62 1y8c_A S-adenosylmethionine-de 86.2 3.5 0.00012 36.3 9.3 102 183-310 37-141 (246)
63 3g07_A 7SK snRNA methylphospha 85.6 1.8 6E-05 40.5 7.4 55 175-239 36-92 (292)
64 3i9f_A Putative type 11 methyl 85.6 5.2 0.00018 33.3 9.7 101 175-309 9-110 (170)
65 4dcm_A Ribosomal RNA large sub 85.5 6.3 0.00022 38.6 11.6 119 170-310 209-333 (375)
66 3mq2_A 16S rRNA methyltransfer 85.4 0.76 2.6E-05 40.4 4.5 112 179-310 23-139 (218)
67 2ip2_A Probable phenazine-spec 85.3 2.9 0.0001 39.4 8.8 115 173-312 158-274 (334)
68 2p7i_A Hypothetical protein; p 85.1 4.5 0.00016 35.4 9.5 94 185-309 44-139 (250)
69 3l8d_A Methyltransferase; stru 85.0 5.6 0.00019 35.0 10.1 99 184-310 54-152 (242)
70 2p35_A Trans-aconitate 2-methy 84.9 5.3 0.00018 35.6 10.0 107 174-310 24-131 (259)
71 2yxd_A Probable cobalt-precorr 84.9 4.1 0.00014 33.9 8.7 102 175-309 27-129 (183)
72 3r0q_C Probable protein argini 84.0 5.4 0.00018 38.9 10.3 115 173-311 53-169 (376)
73 3bkw_A MLL3908 protein, S-aden 83.9 9.5 0.00033 33.4 11.1 109 173-309 33-142 (243)
74 2ex4_A Adrenal gland protein A 83.6 5.8 0.0002 35.3 9.6 105 183-311 79-186 (241)
75 3pfg_A N-methyltransferase; N, 83.2 6.5 0.00022 35.4 9.9 97 184-310 51-150 (263)
76 4fsd_A Arsenic methyltransfera 82.8 8.8 0.0003 37.2 11.3 116 183-313 83-206 (383)
77 2kw5_A SLR1183 protein; struct 82.8 14 0.00048 31.5 11.5 98 186-310 32-130 (202)
78 4e2x_A TCAB9; kijanose, tetron 82.6 2.7 9.3E-05 41.1 7.5 110 173-310 97-207 (416)
79 3gu3_A Methyltransferase; alph 82.4 13 0.00045 34.0 11.8 106 182-312 21-128 (284)
80 3p9n_A Possible methyltransfer 82.2 8.2 0.00028 32.9 9.7 109 185-316 46-158 (189)
81 2y1w_A Histone-arginine methyl 82.1 4.8 0.00016 38.7 8.9 115 172-310 39-154 (348)
82 3ggd_A SAM-dependent methyltra 81.9 1.8 6.1E-05 38.7 5.4 104 185-311 58-164 (245)
83 3iv6_A Putative Zn-dependent a 81.8 2 7E-05 40.2 6.0 108 173-309 35-146 (261)
84 3d2l_A SAM-dependent methyltra 80.6 17 0.00057 31.8 11.4 107 175-310 27-136 (243)
85 3g89_A Ribosomal RNA small sub 80.3 7.8 0.00027 35.4 9.4 102 182-309 79-182 (249)
86 3p2e_A 16S rRNA methylase; met 80.0 3.5 0.00012 37.1 6.8 107 184-309 25-137 (225)
87 2avn_A Ubiquinone/menaquinone 79.9 18 0.00061 32.5 11.6 113 165-310 38-151 (260)
88 1yzh_A TRNA (guanine-N(7)-)-me 79.7 9.3 0.00032 33.3 9.4 109 184-311 42-156 (214)
89 3dli_A Methyltransferase; PSI- 79.3 2.1 7.1E-05 38.3 4.9 96 184-309 42-138 (240)
90 3hm2_A Precorrin-6Y C5,15-meth 79.0 18 0.00063 29.8 10.6 109 174-309 16-125 (178)
91 3ege_A Putative methyltransfer 78.8 5.5 0.00019 36.1 7.7 110 173-315 24-135 (261)
92 1xj5_A Spermidine synthase 1; 78.6 13 0.00044 35.8 10.7 117 184-315 121-239 (334)
93 3giw_A Protein of unknown func 78.5 35 0.0012 32.3 13.4 144 151-311 42-201 (277)
94 2gb4_A Thiopurine S-methyltran 78.4 17 0.00057 33.3 11.0 105 183-307 68-187 (252)
95 1pjz_A Thiopurine S-methyltran 78.4 15 0.0005 32.1 10.2 103 183-306 22-135 (203)
96 3lst_A CALO1 methyltransferase 78.3 2.8 9.6E-05 40.1 5.9 112 173-313 174-289 (348)
97 3cc8_A Putative methyltransfer 77.8 15 0.0005 31.7 10.0 106 172-309 22-128 (230)
98 3q7e_A Protein arginine N-meth 75.7 6.9 0.00024 37.6 7.8 103 185-312 68-174 (349)
99 3cgg_A SAM-dependent methyltra 75.6 28 0.00095 28.9 10.9 99 183-311 46-147 (195)
100 3b3j_A Histone-arginine methyl 75.5 7.3 0.00025 39.6 8.3 113 173-311 148-263 (480)
101 3p9c_A Caffeic acid O-methyltr 74.7 5.4 0.00019 38.5 6.8 109 173-313 190-301 (364)
102 3mti_A RRNA methylase; SAM-dep 74.5 14 0.00046 31.2 8.6 102 186-310 25-134 (185)
103 1fp2_A Isoflavone O-methyltran 74.1 5.9 0.0002 37.8 6.8 99 183-313 188-291 (352)
104 2g72_A Phenylethanolamine N-me 73.9 17 0.0006 33.1 9.9 44 183-237 71-114 (289)
105 1ri5_A MRNA capping enzyme; me 73.9 23 0.00078 32.0 10.6 106 184-310 65-173 (298)
106 1u2z_A Histone-lysine N-methyl 73.4 21 0.00073 35.8 11.0 118 173-309 232-357 (433)
107 1af7_A Chemotaxis receptor met 73.4 31 0.0011 32.2 11.5 117 183-310 105-251 (274)
108 3e05_A Precorrin-6Y C5,15-meth 73.4 22 0.00074 30.5 9.8 109 174-310 31-141 (204)
109 1jsx_A Glucose-inhibited divis 73.3 10 0.00034 32.6 7.6 97 185-311 67-165 (207)
110 4hg2_A Methyltransferase type 73.1 41 0.0014 30.8 12.2 91 186-309 42-133 (257)
111 3dxy_A TRNA (guanine-N(7)-)-me 72.9 8 0.00027 34.5 7.0 109 183-311 34-150 (218)
112 3njr_A Precorrin-6Y methylase; 72.7 39 0.0013 29.3 11.5 105 174-310 46-153 (204)
113 3reo_A (ISO)eugenol O-methyltr 72.0 19 0.00066 34.6 10.1 109 173-313 192-303 (368)
114 1g6q_1 HnRNP arginine N-methyl 71.9 12 0.0004 35.6 8.4 103 185-310 40-144 (328)
115 3eey_A Putative rRNA methylase 71.6 18 0.0006 30.8 8.8 108 185-309 24-137 (197)
116 1zx0_A Guanidinoacetate N-meth 69.7 10 0.00035 33.6 7.0 105 183-309 60-168 (236)
117 2gs9_A Hypothetical protein TT 69.7 20 0.00069 30.7 8.8 101 175-309 29-130 (211)
118 3ftd_A Dimethyladenosine trans 69.3 22 0.00074 32.6 9.3 111 173-313 21-133 (249)
119 2esr_A Methyltransferase; stru 69.2 17 0.00057 30.4 7.9 108 184-315 32-142 (177)
120 2fyt_A Protein arginine N-meth 68.7 20 0.00068 34.3 9.2 114 173-309 54-169 (340)
121 1rjd_A PPM1P, carboxy methyl t 67.8 13 0.00043 36.0 7.6 203 161-385 71-313 (334)
122 3tfw_A Putative O-methyltransf 66.9 11 0.00038 34.0 6.7 104 185-312 65-171 (248)
123 1ws6_A Methyltransferase; stru 66.4 10 0.00034 31.2 5.8 102 185-313 43-149 (171)
124 3tqs_A Ribosomal RNA small sub 66.2 43 0.0015 30.8 10.7 113 174-313 20-134 (255)
125 2fpo_A Methylase YHHF; structu 66.0 7.7 0.00026 33.9 5.3 103 185-313 56-162 (202)
126 2o07_A Spermidine synthase; st 66.0 28 0.00097 32.8 9.6 135 185-341 97-234 (304)
127 3bwc_A Spermidine synthase; SA 65.6 27 0.00093 32.7 9.4 110 185-311 97-210 (304)
128 4azs_A Methyltransferase WBDD; 65.4 6.2 0.00021 40.7 5.1 82 183-287 66-148 (569)
129 1xdz_A Methyltransferase GIDB; 64.8 29 0.00099 30.8 9.0 100 184-310 71-173 (240)
130 3lbf_A Protein-L-isoaspartate 64.6 44 0.0015 28.5 10.0 104 175-310 69-173 (210)
131 3lpm_A Putative methyltransfer 64.5 46 0.0016 29.8 10.5 110 183-310 49-175 (259)
132 3ocj_A Putative exported prote 64.2 24 0.00084 32.5 8.7 104 184-310 119-226 (305)
133 1wy7_A Hypothetical protein PH 63.8 55 0.0019 27.8 10.4 92 184-302 50-141 (207)
134 1vlm_A SAM-dependent methyltra 62.7 42 0.0014 29.0 9.5 89 184-309 48-137 (219)
135 3fut_A Dimethyladenosine trans 62.1 40 0.0014 31.4 9.7 101 159-284 18-123 (271)
136 1uwv_A 23S rRNA (uracil-5-)-me 62.0 71 0.0024 31.4 12.1 108 175-309 278-387 (433)
137 3grz_A L11 mtase, ribosomal pr 61.8 19 0.00066 30.8 7.0 107 172-309 47-157 (205)
138 3id6_C Fibrillarin-like rRNA/T 61.6 56 0.0019 29.7 10.4 112 173-309 63-179 (232)
139 3bxo_A N,N-dimethyltransferase 61.3 63 0.0022 27.8 10.5 98 183-310 40-140 (239)
140 2ift_A Putative methylase HI07 61.3 48 0.0016 28.6 9.6 105 185-314 55-166 (201)
141 1dl5_A Protein-L-isoaspartate 61.1 45 0.0015 31.1 10.0 108 173-309 65-173 (317)
142 1fp1_D Isoliquiritigenin 2'-O- 59.7 51 0.0017 31.4 10.3 108 173-312 198-308 (372)
143 1inl_A Spermidine synthase; be 59.2 61 0.0021 30.1 10.5 136 185-341 92-230 (296)
144 2pjd_A Ribosomal RNA small sub 59.1 31 0.0011 32.7 8.5 115 171-310 184-302 (343)
145 3adn_A Spermidine synthase; am 58.8 32 0.0011 32.3 8.4 135 184-341 84-223 (294)
146 2jjq_A Uncharacterized RNA met 57.5 68 0.0023 31.7 11.0 94 186-310 293-386 (425)
147 2pt6_A Spermidine synthase; tr 57.5 27 0.00093 33.1 7.8 113 185-313 118-232 (321)
148 3dmg_A Probable ribosomal RNA 54.6 1.2E+02 0.0043 29.3 12.2 104 183-311 233-340 (381)
149 1zg3_A Isoflavanone 4'-O-methy 54.3 20 0.00067 34.1 6.2 107 174-312 182-295 (358)
150 1zq9_A Probable dimethyladenos 53.9 51 0.0018 30.4 8.9 41 173-222 18-58 (285)
151 3dr5_A Putative O-methyltransf 53.9 21 0.00071 31.8 6.0 111 177-312 50-164 (221)
152 2i7c_A Spermidine synthase; tr 53.8 33 0.0011 31.7 7.6 110 185-312 80-193 (283)
153 2pxx_A Uncharacterized protein 53.7 35 0.0012 28.9 7.2 32 183-222 42-73 (215)
154 1iy9_A Spermidine synthase; ro 53.6 87 0.003 28.7 10.5 133 184-341 76-214 (275)
155 1nv8_A HEMK protein; class I a 53.6 60 0.0021 30.0 9.4 107 185-312 125-250 (284)
156 2gpy_A O-methyltransferase; st 53.2 21 0.0007 31.4 5.8 100 186-310 57-159 (233)
157 2qn6_B Translation initiation 52.4 18 0.00063 28.6 4.7 41 211-251 50-91 (93)
158 3mb5_A SAM-dependent methyltra 52.0 86 0.003 27.5 9.9 108 174-310 84-193 (255)
159 4hc4_A Protein arginine N-meth 52.0 32 0.0011 33.8 7.5 99 186-308 86-186 (376)
160 1ne2_A Hypothetical protein TA 51.6 64 0.0022 27.3 8.7 31 184-222 52-82 (200)
161 3orh_A Guanidinoacetate N-meth 50.8 16 0.00055 32.7 4.7 104 184-309 61-168 (236)
162 1mjf_A Spermidine synthase; sp 50.1 39 0.0014 31.1 7.5 105 185-311 77-193 (281)
163 2i62_A Nicotinamide N-methyltr 50.0 92 0.0031 27.2 9.7 47 180-237 53-99 (265)
164 2h1r_A Dimethyladenosine trans 49.1 54 0.0018 30.6 8.3 86 172-282 31-117 (299)
165 2b3t_A Protein methyltransfera 48.6 62 0.0021 29.2 8.5 113 175-310 102-237 (276)
166 3uzu_A Ribosomal RNA small sub 47.5 1.3E+02 0.0044 27.9 10.6 45 173-222 32-76 (279)
167 2ozv_A Hypothetical protein AT 47.2 50 0.0017 29.9 7.6 115 182-311 35-170 (260)
168 1ixk_A Methyltransferase; open 46.9 99 0.0034 28.9 9.8 89 173-280 108-196 (315)
169 2yxe_A Protein-L-isoaspartate 46.5 39 0.0013 29.0 6.4 55 174-237 68-122 (215)
170 2a14_A Indolethylamine N-methy 46.5 74 0.0025 28.5 8.6 38 272-309 155-195 (263)
171 1o54_A SAM-dependent O-methylt 46.4 89 0.003 28.1 9.2 109 174-311 103-213 (277)
172 3fpf_A Mtnas, putative unchara 46.2 2E+02 0.0068 27.3 13.4 98 183-310 122-221 (298)
173 2ipx_A RRNA 2'-O-methyltransfe 46.0 62 0.0021 28.3 7.8 101 184-310 78-181 (233)
174 3q87_B N6 adenine specific DNA 45.7 1.3E+02 0.0044 25.0 9.7 27 186-222 26-52 (170)
175 2fca_A TRNA (guanine-N(7)-)-me 44.8 66 0.0023 28.0 7.7 107 184-311 39-153 (213)
176 2zfu_A Nucleomethylin, cerebra 44.5 50 0.0017 28.3 6.8 37 175-223 58-95 (215)
177 2b2c_A Spermidine synthase; be 44.1 43 0.0015 31.8 6.8 131 185-340 110-246 (314)
178 2frn_A Hypothetical protein PH 43.9 1.5E+02 0.0052 26.9 10.4 106 173-310 117-224 (278)
179 1l3i_A Precorrin-6Y methyltran 43.8 65 0.0022 26.4 7.2 104 175-309 25-132 (192)
180 3tr6_A O-methyltransferase; ce 43.5 20 0.00069 31.1 4.1 103 186-312 67-175 (225)
181 3gru_A Dimethyladenosine trans 43.4 1.4E+02 0.0049 27.9 10.3 87 173-283 40-126 (295)
182 3duw_A OMT, O-methyltransferas 42.8 32 0.0011 29.8 5.3 104 185-313 60-169 (223)
183 2ksn_A Ubiquitin domain-contai 42.1 59 0.002 27.6 6.4 38 73-111 57-94 (137)
184 3ghf_A Septum site-determining 41.2 50 0.0017 27.1 5.9 48 187-248 51-99 (120)
185 1uir_A Polyamine aminopropyltr 41.1 1.2E+02 0.004 28.4 9.3 108 185-310 79-194 (314)
186 3ntv_A MW1564 protein; rossman 40.6 33 0.0011 30.3 5.1 103 185-313 73-178 (232)
187 3tm4_A TRNA (guanine N2-)-meth 40.5 1.6E+02 0.0054 28.2 10.4 106 183-309 217-329 (373)
188 3a27_A TYW2, uncharacterized p 40.2 1.1E+02 0.0037 27.9 8.7 95 186-309 122-217 (272)
189 1vbf_A 231AA long hypothetical 39.6 1E+02 0.0035 26.5 8.2 103 174-309 61-163 (231)
190 1o9g_A RRNA methyltransferase; 39.2 42 0.0015 29.8 5.6 43 175-222 43-85 (250)
191 2uyo_A Hypothetical protein ML 38.6 1E+02 0.0034 29.2 8.4 121 172-312 92-219 (310)
192 4dzr_A Protein-(glutamine-N5) 37.1 23 0.00077 30.0 3.3 41 175-222 21-62 (215)
193 2qm3_A Predicted methyltransfe 35.8 1.5E+02 0.0052 28.2 9.4 97 184-305 173-271 (373)
194 2vdv_E TRNA (guanine-N(7)-)-me 35.8 1.9E+02 0.0066 25.3 9.5 48 183-240 49-96 (246)
195 3gdh_A Trimethylguanosine synt 35.6 2.1E+02 0.0073 24.6 10.6 74 184-281 79-154 (241)
196 3ajd_A Putative methyltransfer 35.2 2E+02 0.0068 26.0 9.7 52 183-247 83-134 (274)
197 2fhp_A Methylase, putative; al 35.2 1.5E+02 0.0052 24.2 8.3 107 185-315 46-158 (187)
198 1qam_A ERMC' methyltransferase 32.1 47 0.0016 29.9 4.7 41 173-222 20-60 (244)
199 2avd_A Catechol-O-methyltransf 32.0 81 0.0028 27.2 6.1 103 185-312 71-180 (229)
200 1i1n_A Protein-L-isoaspartate 31.9 84 0.0029 27.0 6.3 46 183-237 77-122 (226)
201 3bzb_A Uncharacterized protein 31.6 2.9E+02 0.01 24.9 10.9 30 185-222 81-110 (281)
202 2pbf_A Protein-L-isoaspartate 30.8 87 0.003 27.0 6.1 50 184-238 81-130 (227)
203 3m33_A Uncharacterized protein 30.6 2.4E+02 0.0082 24.2 9.1 29 185-222 50-78 (226)
204 2igt_A SAM dependent methyltra 30.3 1.2E+02 0.0042 28.6 7.6 112 185-315 155-276 (332)
205 2pwy_A TRNA (adenine-N(1)-)-me 30.1 96 0.0033 27.1 6.4 55 174-237 87-141 (258)
206 1r18_A Protein-L-isoaspartate( 29.7 1.2E+02 0.004 26.3 6.8 52 184-239 85-136 (227)
207 2j66_A BTRK, decarboxylase; bu 29.6 1.6E+02 0.0055 28.6 8.5 68 182-253 132-225 (428)
208 2h00_A Methyltransferase 10 do 29.1 73 0.0025 28.1 5.4 56 183-252 65-122 (254)
209 1i9g_A Hypothetical protein RV 29.0 1E+02 0.0035 27.5 6.5 58 173-239 89-146 (280)
210 2zwa_A Leucine carboxyl methyl 27.9 37 0.0013 35.6 3.7 192 182-385 106-335 (695)
211 1sui_A Caffeoyl-COA O-methyltr 27.9 61 0.0021 29.1 4.7 101 186-311 82-190 (247)
212 1g8a_A Fibrillarin-like PRE-rR 27.6 2.9E+02 0.0098 23.6 9.0 33 184-222 74-106 (227)
213 2b25_A Hypothetical protein; s 27.4 81 0.0028 29.4 5.6 67 166-241 88-154 (336)
214 1yb2_A Hypothetical protein TA 26.6 72 0.0025 28.8 5.0 43 174-222 101-143 (275)
215 3ckk_A TRNA (guanine-N(7)-)-me 26.6 87 0.003 27.9 5.5 49 181-239 44-92 (235)
216 3c0k_A UPF0064 protein YCCW; P 26.3 2.9E+02 0.01 26.3 9.7 107 186-311 223-339 (396)
217 3tma_A Methyltransferase; thum 25.8 2.9E+02 0.0098 25.8 9.3 110 175-304 195-310 (354)
218 1m6y_A S-adenosyl-methyltransf 25.3 51 0.0017 31.2 3.7 45 185-239 28-72 (301)
219 2qy6_A UPF0209 protein YFCK; s 25.0 1.1E+02 0.0038 28.0 6.0 42 181-222 58-104 (257)
220 1jg1_A PIMT;, protein-L-isoasp 24.8 93 0.0032 27.2 5.3 105 174-310 82-188 (235)
221 4ecl_A Serine racemase, vantg; 24.7 2.7E+02 0.0091 26.8 9.0 37 182-222 119-159 (374)
222 1fbn_A MJ fibrillarin homologu 23.2 2E+02 0.007 24.8 7.2 43 173-222 61-106 (230)
223 2yxl_A PH0851 protein, 450AA l 22.5 4.7E+02 0.016 25.5 10.5 64 171-247 247-310 (450)
224 1yz7_A Probable translation in 22.4 1.3E+02 0.0045 26.6 5.7 43 211-253 133-176 (188)
225 2yvl_A TRMI protein, hypotheti 21.2 3.9E+02 0.013 22.8 10.7 109 174-311 82-190 (248)
226 3cpg_A Uncharacterized protein 21.1 2.1E+02 0.0072 26.2 7.1 36 183-222 161-203 (282)
227 2nxc_A L11 mtase, ribosomal pr 20.6 84 0.0029 28.2 4.1 94 185-309 122-216 (254)
228 3evz_A Methyltransferase; NYSG 20.5 3.9E+02 0.013 22.6 9.4 55 183-252 55-110 (230)
229 3tva_A Xylose isomerase domain 20.2 96 0.0033 27.8 4.5 52 290-343 239-290 (290)
230 4df3_A Fibrillarin-like rRNA/T 20.1 3E+02 0.01 24.8 7.8 123 159-309 54-180 (233)
231 2kl8_A OR15; structural genomi 20.0 1.9E+02 0.0064 21.6 5.1 35 213-252 42-76 (85)
No 1
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=96.60 E-value=0.069 Score=50.00 Aligned_cols=105 Identities=13% Similarity=0.188 Sum_probs=64.4
Q ss_pred eEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCC--ceEEEEeecCCccccc
Q 047247 185 LHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGV--PFEFKVITGLNRLVEL 262 (386)
Q Consensus 185 VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgi--pFeF~~v~~~~~~e~l 262 (386)
-+|+|+|.|.|. +...|+.+- ++|..+||||+. +..-++.+.+++. ..|. +++|.. . ++.++
T Consensus 72 ~~vLDlGcGtG~----~~~~la~~~-~~~~~~v~gvD~---s~~ml~~A~~~~~----~~~~~~~v~~~~--~--D~~~~ 135 (261)
T 4gek_A 72 TQVYDLGCSLGA----ATLSVRRNI-HHDNCKIIAIDN---SPAMIERCRRHID----AYKAPTPVDVIE--G--DIRDI 135 (261)
T ss_dssp CEEEEETCTTTH----HHHHHHHTC-CSSSCEEEEEES---CHHHHHHHHHHHH----TSCCSSCEEEEE--S--CTTTC
T ss_pred CEEEEEeCCCCH----HHHHHHHhc-CCCCCEEEEEEC---CHHHHHHHHHHHH----hhccCceEEEee--c--ccccc
Confidence 479999999984 455566553 345789999995 3345655555543 3343 444433 2 34444
Q ss_pred cccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEE-Eeeec
Q 047247 263 TKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVT-IVEEE 312 (386)
Q Consensus 263 ~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvv-lvE~e 312 (386)
.. .+-..+ -|.+.||++....+..+|+.| |.|+|.-++ ++|.-
T Consensus 136 ~~-----~~~d~v--~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~ 180 (261)
T 4gek_A 136 AI-----ENASMV--VLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKF 180 (261)
T ss_dssp CC-----CSEEEE--EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred cc-----cccccc--eeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEecc
Confidence 32 222343 345578998766677888877 558998654 44553
No 2
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=95.70 E-value=0.06 Score=59.03 Aligned_cols=124 Identities=10% Similarity=0.176 Sum_probs=75.6
Q ss_pred HHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHH--HHHcCCceEEEE
Q 047247 175 ILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKF--ARLMGVPFEFKV 252 (386)
Q Consensus 175 ILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~f--A~~lgipFeF~~ 252 (386)
|++.+...+.-.|+|+|.|.| .+...|+.+ ++|.-+||||+. +...++.+.++|... ++..|++ ....
T Consensus 713 LLelL~~~~g~rVLDVGCGTG----~lai~LAr~--g~p~a~VtGVDI---S~emLe~AReRLa~~lnAkr~gl~-nVef 782 (950)
T 3htx_A 713 ALKHIRESSASTLVDFGCGSG----SLLDSLLDY--PTSLQTIIGVDI---SPKGLARAAKMLHVKLNKEACNVK-SATL 782 (950)
T ss_dssp HHHHHHHSCCSEEEEETCSSS----HHHHHHTSS--CCCCCEEEEEES---CHHHHHHHHHHHHHHTTTTCSSCS-EEEE
T ss_pred HHHHhcccCCCEEEEECCCCC----HHHHHHHHh--CCCCCeEEEEEC---CHHHHHHHHHHhhhccchhhcCCC-ceEE
Confidence 444444334557999999998 456667665 456679999995 334666676777654 2234554 2333
Q ss_pred eecCCccccccccccccCCCceEEEeecccccccccchHHHHHHH-HHhcCCcEEEEeeecCCC
Q 047247 253 ITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQM-FQSLKPKVVTIVEEEADL 315 (386)
Q Consensus 253 v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~-ir~L~P~vvvlvE~ea~~ 315 (386)
+.. +++++.. ..+..=+|-|...|||+.......+++. .+-|+|.++++...+.++
T Consensus 783 iqG--Da~dLp~-----~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG~LIISTPN~ey 839 (950)
T 3htx_A 783 YDG--SILEFDS-----RLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPKLLIVSTPNYEF 839 (950)
T ss_dssp EES--CTTSCCT-----TSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCSEEEEEECBGGG
T ss_pred EEC--chHhCCc-----ccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCCEEEEEecCchh
Confidence 322 4555443 2222333444666899876555567766 577899977777665544
No 3
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=94.78 E-value=0.2 Score=43.55 Aligned_cols=112 Identities=11% Similarity=0.063 Sum_probs=66.3
Q ss_pred HHHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc--eE
Q 047247 172 NGAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP--FE 249 (386)
Q Consensus 172 NqaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip--Fe 249 (386)
...|++.+..... +|+|+|.|.|. +...|+.+ |..++|||+. +...++.+.++ ++..|+. ++
T Consensus 33 ~~~~~~~~~~~~~-~vLdiG~G~G~----~~~~l~~~----~~~~v~~~D~---s~~~~~~a~~~----~~~~~~~~~~~ 96 (219)
T 3dlc_A 33 AENIINRFGITAG-TCIDIGSGPGA----LSIALAKQ----SDFSIRALDF---SKHMNEIALKN----IADANLNDRIQ 96 (219)
T ss_dssp HHHHHHHHCCCEE-EEEEETCTTSH----HHHHHHHH----SEEEEEEEES---CHHHHHHHHHH----HHHTTCTTTEE
T ss_pred HHHHHHhcCCCCC-EEEEECCCCCH----HHHHHHHc----CCCeEEEEEC---CHHHHHHHHHH----HHhccccCceE
Confidence 3566666665555 99999999985 45555555 3589999995 23344444433 3445653 45
Q ss_pred EEEeecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEee
Q 047247 250 FKVITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIVE 310 (386)
Q Consensus 250 F~~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlvE 310 (386)
|... +++++. ..++..=+|-|...|||+ .++ ..+|+.+ +.|+|.-.+++.
T Consensus 97 ~~~~----d~~~~~-----~~~~~~D~v~~~~~l~~~-~~~-~~~l~~~~~~L~pgG~l~~~ 147 (219)
T 3dlc_A 97 IVQG----DVHNIP-----IEDNYADLIVSRGSVFFW-EDV-ATAFREIYRILKSGGKTYIG 147 (219)
T ss_dssp EEEC----BTTBCS-----SCTTCEEEEEEESCGGGC-SCH-HHHHHHHHHHEEEEEEEEEE
T ss_pred EEEc----CHHHCC-----CCcccccEEEECchHhhc-cCH-HHHHHHHHHhCCCCCEEEEE
Confidence 4433 344433 233333345555678887 343 4455554 668998776653
No 4
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=94.70 E-value=0.15 Score=45.51 Aligned_cols=112 Identities=13% Similarity=0.105 Sum_probs=65.3
Q ss_pred HHHHhhcC-CCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEE
Q 047247 173 GAILEALD-GETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFK 251 (386)
Q Consensus 173 qaILeA~~-g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~ 251 (386)
+.+++.+. ..+...|+|+|.|.|. +...|+.+. |..++|||+.. ...++.+.+++ +..+ .++|.
T Consensus 33 ~~~~~~~~~~~~~~~vLDiG~G~G~----~~~~l~~~~---~~~~v~~vD~s---~~~~~~a~~~~----~~~~-~~~~~ 97 (234)
T 3dtn_A 33 GVSVSIASVDTENPDILDLGAGTGL----LSAFLMEKY---PEATFTLVDMS---EKMLEIAKNRF----RGNL-KVKYI 97 (234)
T ss_dssp HHHHHTCCCSCSSCEEEEETCTTSH----HHHHHHHHC---TTCEEEEEESC---HHHHHHHHHHT----CSCT-TEEEE
T ss_pred HHHHHHhhcCCCCCeEEEecCCCCH----HHHHHHHhC---CCCeEEEEECC---HHHHHHHHHhh----ccCC-CEEEE
Confidence 56666665 4556899999999984 344444442 45799999952 23444333332 2222 34443
Q ss_pred EeecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEe
Q 047247 252 VITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIV 309 (386)
Q Consensus 252 ~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlv 309 (386)
.. +++++... +..=+|-|...|||+....+..+|+.+ +.|+|.-.+++
T Consensus 98 ~~----d~~~~~~~------~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 146 (234)
T 3dtn_A 98 EA----DYSKYDFE------EKYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFIN 146 (234)
T ss_dssp ES----CTTTCCCC------SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred eC----chhccCCC------CCceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 32 34444322 333345555779998655555677766 55899866655
No 5
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=94.38 E-value=0.74 Score=41.70 Aligned_cols=109 Identities=12% Similarity=0.093 Sum_probs=62.2
Q ss_pred HHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc-eEEEEe
Q 047247 175 ILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP-FEFKVI 253 (386)
Q Consensus 175 ILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip-FeF~~v 253 (386)
|++.+.-...-+|+|+|.|.|. +...|+.+. + ++|||+. +...++.+.++ ++..|++ ++|...
T Consensus 29 l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~--~---~v~gvD~---s~~~l~~a~~~----~~~~~~~~v~~~~~ 92 (260)
T 1vl5_A 29 LMQIAALKGNEEVLDVATGGGH----VANAFAPFV--K---KVVAFDL---TEDILKVARAF----IEGNGHQQVEYVQG 92 (260)
T ss_dssp HHHHHTCCSCCEEEEETCTTCH----HHHHHGGGS--S---EEEEEES---CHHHHHHHHHH----HHHTTCCSEEEEEC
T ss_pred HHHHhCCCCCCEEEEEeCCCCH----HHHHHHHhC--C---EEEEEeC---CHHHHHHHHHH----HHhcCCCceEEEEe
Confidence 4444444455689999999875 555666663 2 8999995 22344444333 3445655 454432
Q ss_pred ecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHHHhcCCcEEEEe
Q 047247 254 TGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMFQSLKPKVVTIV 309 (386)
Q Consensus 254 ~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~ir~L~P~vvvlv 309 (386)
+++++. ..++..=+|-|.+.|||+. ++...+-+..|.|+|.-.+++
T Consensus 93 ----d~~~l~-----~~~~~fD~V~~~~~l~~~~-d~~~~l~~~~r~LkpgG~l~~ 138 (260)
T 1vl5_A 93 ----DAEQMP-----FTDERFHIVTCRIAAHHFP-NPASFVSEAYRVLKKGGQLLL 138 (260)
T ss_dssp ----CC-CCC-----SCTTCEEEEEEESCGGGCS-CHHHHHHHHHHHEEEEEEEEE
T ss_pred ----cHHhCC-----CCCCCEEEEEEhhhhHhcC-CHHHHHHHHHHHcCCCCEEEE
Confidence 344432 2333343455667788885 444434444567899866655
No 6
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=94.22 E-value=0.16 Score=44.91 Aligned_cols=119 Identities=15% Similarity=0.194 Sum_probs=67.5
Q ss_pred HHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCC------ce
Q 047247 175 ILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGV------PF 248 (386)
Q Consensus 175 ILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgi------pF 248 (386)
|++.+...+.-.|+|+|.|.|. +...|+.+. |..++|||+.. ...++.+.+++ +..++ .+
T Consensus 21 l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~---~~~~v~gvD~s---~~~~~~a~~~~----~~~~~~~~~~~~v 86 (219)
T 3jwg_A 21 VVAVLKSVNAKKVIDLGCGEGN----LLSLLLKDK---SFEQITGVDVS---YSVLERAKDRL----KIDRLPEMQRKRI 86 (219)
T ss_dssp HHHHHHHTTCCEEEEETCTTCH----HHHHHHTST---TCCEEEEEESC---HHHHHHHHHHH----TGGGSCHHHHTTE
T ss_pred HHHHHhhcCCCEEEEecCCCCH----HHHHHHhcC---CCCEEEEEECC---HHHHHHHHHHH----HhhccccccCcce
Confidence 3344433344589999999985 556666653 34799999952 33454444433 22233 34
Q ss_pred EEEEeecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEeeecCCCC
Q 047247 249 EFKVITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIVEEEADLT 316 (386)
Q Consensus 249 eF~~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlvE~ea~~n 316 (386)
+|..- +++.+... ...=+.|+ |...|||+....+..+|+.+ +.|+|..++++.....++
T Consensus 87 ~~~~~----d~~~~~~~---~~~fD~V~--~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~ 146 (219)
T 3jwg_A 87 SLFQS----SLVYRDKR---FSGYDAAT--VIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYN 146 (219)
T ss_dssp EEEEC----CSSSCCGG---GTTCSEEE--EESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGG
T ss_pred EEEeC----cccccccc---cCCCCEEE--EHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhh
Confidence 44432 23322211 11113333 56678888644456777766 567999888777665553
No 7
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=94.20 E-value=0.33 Score=44.84 Aligned_cols=111 Identities=6% Similarity=-0.014 Sum_probs=66.4
Q ss_pred HHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEE
Q 047247 173 GAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKV 252 (386)
Q Consensus 173 qaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~ 252 (386)
..+++.+...+.-+|+|+|.|.|. +...|+.+ | .++|||+.. ...++.+. +.++..|+..+|..
T Consensus 110 ~~~~~~~~~~~~~~vLD~GcG~G~----~~~~l~~~--g---~~v~~vD~s---~~~~~~a~----~~~~~~~~~~~~~~ 173 (286)
T 3m70_A 110 GDVVDAAKIISPCKVLDLGCGQGR----NSLYLSLL--G---YDVTSWDHN---ENSIAFLN----ETKEKENLNISTAL 173 (286)
T ss_dssp HHHHHHHHHSCSCEEEEESCTTCH----HHHHHHHT--T---CEEEEEESC---HHHHHHHH----HHHHHTTCCEEEEE
T ss_pred HHHHHHhhccCCCcEEEECCCCCH----HHHHHHHC--C---CeEEEEECC---HHHHHHHH----HHHHHcCCceEEEE
Confidence 345555544456689999999985 45556666 2 489999952 23443333 33455677555554
Q ss_pred eecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEe
Q 047247 253 ITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIV 309 (386)
Q Consensus 253 v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlv 309 (386)
. ++.++.. ++..=+|-|...+||+....+..+|+.+ +.|+|.-++++
T Consensus 174 ~----d~~~~~~------~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 221 (286)
T 3m70_A 174 Y----DINAANI------QENYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLI 221 (286)
T ss_dssp C----CGGGCCC------CSCEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEE
T ss_pred e----ccccccc------cCCccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 3 3444332 2323334444568888666667788776 55799876444
No 8
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=93.93 E-value=0.54 Score=44.34 Aligned_cols=117 Identities=16% Similarity=0.144 Sum_probs=70.8
Q ss_pred HHHHhhcCC--CceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc--e
Q 047247 173 GAILEALDG--ETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP--F 248 (386)
Q Consensus 173 qaILeA~~g--~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip--F 248 (386)
..|++.+.. .+..+|+|+|.|.|. +...|+.+. |..++|+++. + ..++.+.+++. ..|++ +
T Consensus 153 ~~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~---~-~~~~~a~~~~~----~~~~~~~v 217 (335)
T 2r3s_A 153 QLIAQLVNENKIEPLKVLDISASHGL----FGIAVAQHN---PNAEIFGVDW---A-SVLEVAKENAR----IQGVASRY 217 (335)
T ss_dssp HHHHHHHTC--CCCSEEEEETCTTCH----HHHHHHHHC---TTCEEEEEEC---H-HHHHHHHHHHH----HHTCGGGE
T ss_pred HHHHHhcccccCCCCEEEEECCCcCH----HHHHHHHHC---CCCeEEEEec---H-HHHHHHHHHHH----hcCCCcce
Confidence 467777765 667899999999984 444555543 4579999995 3 45555554443 34554 5
Q ss_pred EEEEeecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcE-EEEeeecCC
Q 047247 249 EFKVITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKV-VTIVEEEAD 314 (386)
Q Consensus 249 eF~~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~v-vvlvE~ea~ 314 (386)
+|... ++.+.. ...+ .=+|-|...||++.......+|+.+ +.|+|.- ++++|...+
T Consensus 218 ~~~~~----d~~~~~-----~~~~-~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 275 (335)
T 2r3s_A 218 HTIAG----SAFEVD-----YGND-YDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPN 275 (335)
T ss_dssp EEEES----CTTTSC-----CCSC-EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCC
T ss_pred EEEec----ccccCC-----CCCC-CcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCC
Confidence 55443 233221 1122 3344455678888655556777776 5579987 556665443
No 9
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=93.85 E-value=0.76 Score=40.23 Aligned_cols=113 Identities=9% Similarity=0.105 Sum_probs=64.9
Q ss_pred HHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc-eEEE
Q 047247 173 GAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP-FEFK 251 (386)
Q Consensus 173 qaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip-FeF~ 251 (386)
..|++.+.-.+.-.|+|+|.|.|.--..|.+.. +|..++|||+. +...++.+.+++ +..|++ ++|.
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~------~~~~~v~~vD~---s~~~~~~a~~~~----~~~~~~~~~~~ 93 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMV------GEKGKVYAIDV---QEEMVNYAWEKV----NKLGLKNVEVL 93 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHH------TTTCEEEEEES---CHHHHHHHHHHH----HHHTCTTEEEE
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHh------CCCcEEEEEEC---CHHHHHHHHHHH----HHcCCCcEEEE
Confidence 456666655556689999999987544444433 34569999995 233454444433 344655 4444
Q ss_pred EeecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEe
Q 047247 252 VITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIV 309 (386)
Q Consensus 252 ~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlv 309 (386)
.. +++++. ..++..=+|-+...+|++. ++ ..+|+.+ +.|+|.-++++
T Consensus 94 ~~----d~~~~~-----~~~~~fD~v~~~~~l~~~~-~~-~~~l~~~~~~LkpgG~l~i 141 (219)
T 3dh0_A 94 KS----EENKIP-----LPDNTVDFIFMAFTFHELS-EP-LKFLEELKRVAKPFAYLAI 141 (219)
T ss_dssp EC----BTTBCS-----SCSSCEEEEEEESCGGGCS-SH-HHHHHHHHHHEEEEEEEEE
T ss_pred ec----ccccCC-----CCCCCeeEEEeehhhhhcC-CH-HHHHHHHHHHhCCCeEEEE
Confidence 33 344332 2233344455556688874 33 4555554 66899855544
No 10
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=93.69 E-value=0.83 Score=41.64 Aligned_cols=111 Identities=17% Similarity=0.056 Sum_probs=65.8
Q ss_pred HHHHHhhcC-CCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc--e
Q 047247 172 NGAILEALD-GETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP--F 248 (386)
Q Consensus 172 NqaILeA~~-g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip--F 248 (386)
...+++.+. -.+.-+|+|+|.|.| .+...|+.+ |..++|||+.. ...++.+. +.++..|++ .
T Consensus 34 ~~~~l~~l~~~~~~~~vLDiGcG~G----~~~~~la~~----~~~~v~gvD~s---~~~~~~a~----~~~~~~~~~~~v 98 (267)
T 3kkz_A 34 TLKALSFIDNLTEKSLIADIGCGTG----GQTMVLAGH----VTGQVTGLDFL---SGFIDIFN----RNARQSGLQNRV 98 (267)
T ss_dssp HHHHHTTCCCCCTTCEEEEETCTTC----HHHHHHHTT----CSSEEEEEESC---HHHHHHHH----HHHHHTTCTTTE
T ss_pred HHHHHHhcccCCCCCEEEEeCCCCC----HHHHHHHhc----cCCEEEEEeCC---HHHHHHHH----HHHHHcCCCcCc
Confidence 334555554 234568999999987 455667776 34699999952 23444333 334556765 5
Q ss_pred EEEEeecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEe
Q 047247 249 EFKVITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIV 309 (386)
Q Consensus 249 eF~~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlv 309 (386)
+|... +++++. ..++..=+|-|...+||+ ++ ..+|+.+ +.|+|.-++++
T Consensus 99 ~~~~~----d~~~~~-----~~~~~fD~i~~~~~~~~~--~~-~~~l~~~~~~LkpgG~l~~ 148 (267)
T 3kkz_A 99 TGIVG----SMDDLP-----FRNEELDLIWSEGAIYNI--GF-ERGLNEWRKYLKKGGYLAV 148 (267)
T ss_dssp EEEEC----CTTSCC-----CCTTCEEEEEESSCGGGT--CH-HHHHHHHGGGEEEEEEEEE
T ss_pred EEEEc----ChhhCC-----CCCCCEEEEEEcCCceec--CH-HHHHHHHHHHcCCCCEEEE
Confidence 55443 344443 223444455566678887 33 5566655 66899866554
No 11
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=93.65 E-value=0.37 Score=44.49 Aligned_cols=111 Identities=12% Similarity=0.123 Sum_probs=60.9
Q ss_pred HHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEe
Q 047247 174 AILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVI 253 (386)
Q Consensus 174 aILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v 253 (386)
.|++.+.-...-+|+|+|.|.|. +...|+.+.+ .++|||+.. ...++.+.++ ++..|+.-....+
T Consensus 55 ~~~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~~----~~v~gvd~s---~~~~~~a~~~----~~~~~~~~~~~~~ 119 (287)
T 1kpg_A 55 LALGKLGLQPGMTLLDVGCGWGA----TMMRAVEKYD----VNVVGLTLS---KNQANHVQQL----VANSENLRSKRVL 119 (287)
T ss_dssp HHHTTTTCCTTCEEEEETCTTSH----HHHHHHHHHC----CEEEEEESC---HHHHHHHHHH----HHTCCCCSCEEEE
T ss_pred HHHHHcCCCCcCEEEEECCcccH----HHHHHHHHcC----CEEEEEECC---HHHHHHHHHH----HHhcCCCCCeEEE
Confidence 45566554555689999998875 4445553332 299999952 2344433333 3444553222333
Q ss_pred ecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEe
Q 047247 254 TGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIV 309 (386)
Q Consensus 254 ~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlv 309 (386)
.. +++++. ..=+.|+ |...|||+.......+|+.+ +-|+|.-.+++
T Consensus 120 ~~--d~~~~~------~~fD~v~--~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 166 (287)
T 1kpg_A 120 LA--GWEQFD------EPVDRIV--SIGAFEHFGHERYDAFFSLAHRLLPADGVMLL 166 (287)
T ss_dssp ES--CGGGCC------CCCSEEE--EESCGGGTCTTTHHHHHHHHHHHSCTTCEEEE
T ss_pred EC--ChhhCC------CCeeEEE--EeCchhhcChHHHHHHHHHHHHhcCCCCEEEE
Confidence 22 344443 1113333 44568888654455666665 66899855544
No 12
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=93.41 E-value=0.69 Score=39.61 Aligned_cols=109 Identities=13% Similarity=0.084 Sum_probs=61.7
Q ss_pred HHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCC-ceEEEE
Q 047247 174 AILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGV-PFEFKV 252 (386)
Q Consensus 174 aILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgi-pFeF~~ 252 (386)
.|++.+...+.-+|+|+|.|.|. +...|+.+ | .++|||+.. ...++.+.++ ++..++ ..+|..
T Consensus 23 ~l~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~--~---~~v~~vD~s---~~~~~~a~~~----~~~~~~~~~~~~~ 86 (199)
T 2xvm_A 23 EVLEAVKVVKPGKTLDLGCGNGR----NSLYLAAN--G---YDVDAWDKN---AMSIANVERI----KSIENLDNLHTRV 86 (199)
T ss_dssp HHHHHTTTSCSCEEEEETCTTSH----HHHHHHHT--T---CEEEEEESC---HHHHHHHHHH----HHHHTCTTEEEEE
T ss_pred HHHHHhhccCCCeEEEEcCCCCH----HHHHHHHC--C---CeEEEEECC---HHHHHHHHHH----HHhCCCCCcEEEE
Confidence 45555554444599999999875 44455655 2 489999952 2344443333 333455 344443
Q ss_pred eecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEE
Q 047247 253 ITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTI 308 (386)
Q Consensus 253 v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvl 308 (386)
. ++.++.. ++..=+|-+...+|++.......+|+.+ +.|+|.-.++
T Consensus 87 ~----d~~~~~~------~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~ 133 (199)
T 2xvm_A 87 V----DLNNLTF------DRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNL 133 (199)
T ss_dssp C----CGGGCCC------CCCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEE
T ss_pred c----chhhCCC------CCCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEE
Confidence 3 3443321 2222233344568887655566677766 5579986643
No 13
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=92.98 E-value=0.36 Score=42.61 Aligned_cols=107 Identities=17% Similarity=0.218 Sum_probs=61.8
Q ss_pred ceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc------eEEEEeecC
Q 047247 183 TKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP------FEFKVITGL 256 (386)
Q Consensus 183 ~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip------FeF~~v~~~ 256 (386)
+.-.|+|+|.|.|. +...|+.+. |..++|||+.. ...++.+.+++ +..|++ ++|..-
T Consensus 29 ~~~~vLDiGcG~G~----~~~~l~~~~---~~~~v~gvD~s---~~~~~~a~~~~----~~~~~~~~~~~~v~~~~~--- 91 (217)
T 3jwh_A 29 NARRVIDLGCGQGN----LLKILLKDS---FFEQITGVDVS---YRSLEIAQERL----DRLRLPRNQWERLQLIQG--- 91 (217)
T ss_dssp TCCEEEEETCTTCH----HHHHHHHCT---TCSEEEEEESC---HHHHHHHHHHH----TTCCCCHHHHTTEEEEEC---
T ss_pred CCCEEEEeCCCCCH----HHHHHHhhC---CCCEEEEEECC---HHHHHHHHHHH----HHhcCCcccCcceEEEeC---
Confidence 44589999999985 555566653 34699999952 23444444332 333443 444432
Q ss_pred CccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEeeec
Q 047247 257 NRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIVEEE 312 (386)
Q Consensus 257 ~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlvE~e 312 (386)
+++.+... ...=+.|+ |...|||+.......+|+.+ +.|+|..++++...
T Consensus 92 -d~~~~~~~---~~~fD~v~--~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 92 -ALTYQDKR---FHGYDAAT--VIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp -CTTSCCGG---GCSCSEEE--EESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred -Cccccccc---CCCcCEEe--eHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccC
Confidence 23322211 11223444 55668888655557788776 45799987777554
No 14
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=92.90 E-value=1.6 Score=39.16 Aligned_cols=113 Identities=12% Similarity=0.059 Sum_probs=65.9
Q ss_pred HHHHHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceE
Q 047247 170 ASNGAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFE 249 (386)
Q Consensus 170 tANqaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFe 249 (386)
..-..|++.+...+.-.|+|+|.|.|. +...|+.+ |+ . ++|||+.. ...++.+.+++. +-..+
T Consensus 31 ~~~~~l~~~~~~~~~~~vLD~GcG~G~----~~~~l~~~--~~-~-~v~~vD~s---~~~~~~a~~~~~------~~~~~ 93 (253)
T 3g5l_A 31 GEWHELKKMLPDFNQKTVLDLGCGFGW----HCIYAAEH--GA-K-KVLGIDLS---ERMLTEAKRKTT------SPVVC 93 (253)
T ss_dssp HHHHHHHTTCCCCTTCEEEEETCTTCH----HHHHHHHT--TC-S-EEEEEESC---HHHHHHHHHHCC------CTTEE
T ss_pred hhHHHHHHhhhccCCCEEEEECCCCCH----HHHHHHHc--CC-C-EEEEEECC---HHHHHHHHHhhc------cCCeE
Confidence 344567777776677889999999983 55566665 22 2 89999952 223433333222 23344
Q ss_pred EEEeecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEee
Q 047247 250 FKVITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIVE 310 (386)
Q Consensus 250 F~~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlvE 310 (386)
|... +++++. ..++..=+|-|...|||+. + ...+|+.+ +-|+|.-.+++.
T Consensus 94 ~~~~----d~~~~~-----~~~~~fD~v~~~~~l~~~~-~-~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 94 YEQK----AIEDIA-----IEPDAYNVVLSSLALHYIA-S-FDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp EEEC----CGGGCC-----CCTTCEEEEEEESCGGGCS-C-HHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEc----chhhCC-----CCCCCeEEEEEchhhhhhh-h-HHHHHHHHHHHcCCCcEEEEE
Confidence 4443 344332 2234444455555788883 3 45566655 558998777664
No 15
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=92.63 E-value=0.5 Score=41.47 Aligned_cols=108 Identities=10% Similarity=0.088 Sum_probs=59.2
Q ss_pred HHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEE
Q 047247 173 GAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKV 252 (386)
Q Consensus 173 qaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~ 252 (386)
..+++.+...+.-.|+|+|.|.|. +...|+.+ + .++|||+.. ...++.+.+++. -++ +|..
T Consensus 35 ~~~l~~~~~~~~~~vLDiGcG~G~----~~~~l~~~--~---~~v~~vD~s---~~~~~~a~~~~~-----~~~--~~~~ 95 (220)
T 3hnr_A 35 EDILEDVVNKSFGNVLEFGVGTGN----LTNKLLLA--G---RTVYGIEPS---REMRMIAKEKLP-----KEF--SITE 95 (220)
T ss_dssp HHHHHHHHHTCCSEEEEECCTTSH----HHHHHHHT--T---CEEEEECSC---HHHHHHHHHHSC-----TTC--CEES
T ss_pred HHHHHHhhccCCCeEEEeCCCCCH----HHHHHHhC--C---CeEEEEeCC---HHHHHHHHHhCC-----Cce--EEEe
Confidence 345555544456689999999984 55556665 2 589999952 223333332221 123 2322
Q ss_pred eecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEe
Q 047247 253 ITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIV 309 (386)
Q Consensus 253 v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlv 309 (386)
. +++++... ..=+.|+ |...|||+....+..+|+.+ +.|+|.-.+++
T Consensus 96 ~----d~~~~~~~----~~fD~v~--~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i 143 (220)
T 3hnr_A 96 G----DFLSFEVP----TSIDTIV--STYAFHHLTDDEKNVAIAKYSQLLNKGGKIVF 143 (220)
T ss_dssp C----CSSSCCCC----SCCSEEE--EESCGGGSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred C----ChhhcCCC----CCeEEEE--ECcchhcCChHHHHHHHHHHHHhcCCCCEEEE
Confidence 1 34433221 2223444 34568888654444466665 56899865555
No 16
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=92.37 E-value=0.57 Score=43.65 Aligned_cols=115 Identities=11% Similarity=0.100 Sum_probs=62.2
Q ss_pred CceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcC---CceEEEEeecCCc
Q 047247 182 ETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMG---VPFEFKVITGLNR 258 (386)
Q Consensus 182 ~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lg---ipFeF~~v~~~~~ 258 (386)
....+|+|+|.|.|.--..++..|+.+..+ -.+.+|||++ +..-++...+++. +.-| +.|+|... .
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~-~~v~~~~vD~---S~~ml~~a~~~~~---~~~~~~~v~~~~~~~----~ 119 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPG-VCINNEVVEP---SAEQIAKYKELVA---KTSNLENVKFAWHKE----T 119 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTT-CEEEEEEECS---CHHHHHHHHHHHH---TCSSCTTEEEEEECS----C
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCC-ceeeEEEEeC---CHHHHHHHHHHHH---hccCCCcceEEEEec----c
Confidence 566799999999995444567777665311 1234599995 3334544444432 2123 33444332 2
Q ss_pred cccccccc-cccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEe
Q 047247 259 LVELTKGT-LGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIV 309 (386)
Q Consensus 259 ~e~l~~~~-L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlv 309 (386)
.+++.... ....++..=+|-|...|||+. ++ +.+|+.+ |-|+|.-.+++
T Consensus 120 ~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~-d~-~~~l~~~~r~LkpgG~l~i 170 (292)
T 2aot_A 120 SSEYQSRMLEKKELQKWDFIHMIQMLYYVK-DI-PATLKFFHSLLGTNAKMLI 170 (292)
T ss_dssp HHHHHHHHHTTTCCCCEEEEEEESCGGGCS-CH-HHHHHHHHHTEEEEEEEEE
T ss_pred hhhhhhhhccccCCCceeEEEEeeeeeecC-CH-HHHHHHHHHHcCCCcEEEE
Confidence 33332100 001233344667778899985 34 4456655 55799965544
No 17
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=92.36 E-value=2.7 Score=40.54 Aligned_cols=118 Identities=14% Similarity=0.080 Sum_probs=65.5
Q ss_pred HHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc--eEEE
Q 047247 174 AILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP--FEFK 251 (386)
Q Consensus 174 aILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip--FeF~ 251 (386)
.+++.+.....-+|+|+|.|.|. +...|+.+. |.+++|+++.| ..++.+.++ ++..|+. ++|.
T Consensus 170 ~~l~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~----~~~~~a~~~----~~~~~~~~~v~~~ 234 (363)
T 3dp7_A 170 KALEIVFSHHPKRLLDIGGNTGK----WATQCVQYN---KEVEVTIVDLP----QQLEMMRKQ----TAGLSGSERIHGH 234 (363)
T ss_dssp HHHHHHGGGCCSEEEEESCTTCH----HHHHHHHHS---TTCEEEEEECH----HHHHHHHHH----HTTCTTGGGEEEE
T ss_pred HHHHHhcccCCCEEEEeCCCcCH----HHHHHHHhC---CCCEEEEEeCH----HHHHHHHHH----HHhcCcccceEEE
Confidence 34444433455689999999985 444555542 45799999952 234433333 3445553 5555
Q ss_pred EeecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEE-EeeecCC
Q 047247 252 VITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVT-IVEEEAD 314 (386)
Q Consensus 252 ~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvv-lvE~ea~ 314 (386)
.- ++.+... .+. ..-++++ +...||++.......+|+.+ +.|+|.-.+ ++|.-.+
T Consensus 235 ~~----d~~~~~~-~~p-~~~D~v~--~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 291 (363)
T 3dp7_A 235 GA----NLLDRDV-PFP-TGFDAVW--MSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWD 291 (363)
T ss_dssp EC----CCCSSSC-CCC-CCCSEEE--EESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTT
T ss_pred Ec----cccccCC-CCC-CCcCEEE--EechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccC
Confidence 43 2332210 011 1224444 44468888755556778777 558998654 5554443
No 18
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=92.33 E-value=1 Score=43.29 Aligned_cols=113 Identities=20% Similarity=0.197 Sum_probs=66.8
Q ss_pred HHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc--eEE
Q 047247 173 GAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP--FEF 250 (386)
Q Consensus 173 qaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip--FeF 250 (386)
..|++.+.-.+..+|+|+|.|.| .+...|+.+. |.+++|+++. . ..++.+.+++ +..|+. ++|
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G----~~~~~l~~~~---~~~~~~~~D~-~---~~~~~a~~~~----~~~~~~~~v~~ 236 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNG----GMLAAIALRA---PHLRGTLVEL-A---GPAERARRRF----ADAGLADRVTV 236 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTS----HHHHHHHHHC---TTCEEEEEEC-H---HHHHHHHHHH----HHTTCTTTEEE
T ss_pred HHHHHhCCCCCCCEEEEECCCcC----HHHHHHHHHC---CCCEEEEEeC-H---HHHHHHHHHH----HhcCCCCceEE
Confidence 45677765556679999999999 4555555553 4689999994 1 2444444443 344553 555
Q ss_pred EEeecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcE-EEEeee
Q 047247 251 KVITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKV-VTIVEE 311 (386)
Q Consensus 251 ~~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~v-vvlvE~ 311 (386)
..- ++.+ .+ ++..=+|-|...||++.......+|+.+ +.|+|.- ++++|.
T Consensus 237 ~~~----d~~~----~~---~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 237 AEG----DFFK----PL---PVTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEC----CTTS----CC---SCCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EeC----CCCC----cC---CCCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 543 2222 11 1113344455668887654445677766 5579986 445565
No 19
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=92.27 E-value=0.24 Score=46.74 Aligned_cols=124 Identities=15% Similarity=0.083 Sum_probs=72.9
Q ss_pred eeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEeecCCcccccc
Q 047247 184 KLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVITGLNRLVELT 263 (386)
Q Consensus 184 ~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v~~~~~~e~l~ 263 (386)
--.|+|+|.|.|. |--.+. |..+++|++-. ...+ ..+.+++...|.++.|..... ....
T Consensus 106 p~~VLDlGCG~gp----Lal~~~------~~~~y~a~DId---~~~i----~~ar~~~~~~g~~~~~~v~D~----~~~~ 164 (253)
T 3frh_A 106 PRRVLDIACGLNP----LALYER------GIASVWGCDIH---QGLG----DVITPFAREKDWDFTFALQDV----LCAP 164 (253)
T ss_dssp CSEEEEETCTTTH----HHHHHT------TCSEEEEEESB---HHHH----HHHHHHHHHTTCEEEEEECCT----TTSC
T ss_pred CCeEEEecCCccH----HHHHhc------cCCeEEEEeCC---HHHH----HHHHHHHHhcCCCceEEEeec----ccCC
Confidence 3489999998862 222221 56899999852 2233 455566777899988877531 1111
Q ss_pred ccccccCCCceEEEeecccccccccchHHHHHHHHHhcCCcEEEEeeecCCCCCCccchHHHHHHHHHHHHHHHHHhh
Q 047247 264 KGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMFQSLKPKVVTIVEEEADLTSSRYDFVKCFEECLRFYTLYFEMLE 341 (386)
Q Consensus 264 ~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~ir~L~P~vvvlvE~ea~~n~~~~~F~~RF~eaL~~YsalFDsLd 341 (386)
+. .+.+++.++-. +|+|....+...++.+..|+|..||+.=+-=..+++ =..--..|+..|+..=
T Consensus 165 ---~~-~~~DvvLllk~--lh~LE~q~~~~~~~ll~aL~~~~vvVsfPtksl~Gr-------~~gm~~~Y~~~~e~~~ 229 (253)
T 3frh_A 165 ---PA-EAGDLALIFKL--LPLLEREQAGSAMALLQSLNTPRMAVSFPTRSLGGR-------GKGMEANYAAWFEGGL 229 (253)
T ss_dssp ---CC-CBCSEEEEESC--HHHHHHHSTTHHHHHHHHCBCSEEEEEEECC------------------CHHHHHHHHS
T ss_pred ---CC-CCcchHHHHHH--HHHhhhhchhhHHHHHHHhcCCCEEEEcChHHhcCC-------CcchhhHHHHHHHHHh
Confidence 11 24566656555 788876677788899999999988887552222222 1122256777776643
No 20
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=92.14 E-value=1.5 Score=39.39 Aligned_cols=114 Identities=11% Similarity=0.017 Sum_probs=64.1
Q ss_pred HHHHHHHhhcCC-CceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc-
Q 047247 170 ASNGAILEALDG-ETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP- 247 (386)
Q Consensus 170 tANqaILeA~~g-~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip- 247 (386)
.....+++.+.+ ...-+|+|+|.|.|. +...|+.+.+ . ++|||+.. ...++.+. +.++..|++
T Consensus 32 ~~~~~~l~~l~~~~~~~~vLDiG~G~G~----~~~~l~~~~~---~-~v~~vD~s---~~~~~~a~----~~~~~~~~~~ 96 (257)
T 3f4k_A 32 EATRKAVSFINELTDDAKIADIGCGTGG----QTLFLADYVK---G-QITGIDLF---PDFIEIFN----ENAVKANCAD 96 (257)
T ss_dssp HHHHHHHTTSCCCCTTCEEEEETCTTSH----HHHHHHHHCC---S-EEEEEESC---HHHHHHHH----HHHHHTTCTT
T ss_pred HHHHHHHHHHhcCCCCCeEEEeCCCCCH----HHHHHHHhCC---C-eEEEEECC---HHHHHHHH----HHHHHcCCCC
Confidence 334445555532 334589999999985 3344444432 2 99999952 23443333 345556766
Q ss_pred -eEEEEeecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEee
Q 047247 248 -FEFKVITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIVE 310 (386)
Q Consensus 248 -FeF~~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlvE 310 (386)
.+|..- +++++. ..++..=+|-|...+||+ + .+.+|+.+ +-|+|.-.+++.
T Consensus 97 ~~~~~~~----d~~~~~-----~~~~~fD~v~~~~~l~~~--~-~~~~l~~~~~~L~pgG~l~~~ 149 (257)
T 3f4k_A 97 RVKGITG----SMDNLP-----FQNEELDLIWSEGAIYNI--G-FERGMNEWSKYLKKGGFIAVS 149 (257)
T ss_dssp TEEEEEC----CTTSCS-----SCTTCEEEEEEESCSCCC--C-HHHHHHHHHTTEEEEEEEEEE
T ss_pred ceEEEEC----ChhhCC-----CCCCCEEEEEecChHhhc--C-HHHHHHHHHHHcCCCcEEEEE
Confidence 555433 344443 223434445555668887 3 45566655 558998666553
No 21
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=91.92 E-value=0.63 Score=44.79 Aligned_cols=116 Identities=13% Similarity=0.123 Sum_probs=68.7
Q ss_pred HHHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc--eE
Q 047247 172 NGAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP--FE 249 (386)
Q Consensus 172 NqaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip--Fe 249 (386)
...|++.+.-.+.-.|+|+|.|.|. +...|+.+. |.+++|+++.+. .++.+.+++ +..|++ ++
T Consensus 179 ~~~l~~~~~~~~~~~vLDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~~----~~~~a~~~~----~~~~~~~~v~ 243 (359)
T 1x19_A 179 IQLLLEEAKLDGVKKMIDVGGGIGD----ISAAMLKHF---PELDSTILNLPG----AIDLVNENA----AEKGVADRMR 243 (359)
T ss_dssp HHHHHHHCCCTTCCEEEEESCTTCH----HHHHHHHHC---TTCEEEEEECGG----GHHHHHHHH----HHTTCTTTEE
T ss_pred HHHHHHhcCCCCCCEEEEECCcccH----HHHHHHHHC---CCCeEEEEecHH----HHHHHHHHH----HhcCCCCCEE
Confidence 3577888765666799999999986 344444442 468999999622 344444433 334553 55
Q ss_pred EEEeecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEE-EeeecC
Q 047247 250 FKVITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVT-IVEEEA 313 (386)
Q Consensus 250 F~~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvv-lvE~ea 313 (386)
|..- ++.+.. +..+++++. ...||++.......+|+.+ +.|+|.-.+ ++|...
T Consensus 244 ~~~~----d~~~~~-----~~~~D~v~~--~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~ 298 (359)
T 1x19_A 244 GIAV----DIYKES-----YPEADAVLF--CRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVI 298 (359)
T ss_dssp EEEC----CTTTSC-----CCCCSEEEE--ESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECC
T ss_pred EEeC----ccccCC-----CCCCCEEEE--echhccCCHHHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 5443 233321 223355444 4558887654466777776 457997544 566443
No 22
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=91.46 E-value=0.55 Score=43.76 Aligned_cols=114 Identities=8% Similarity=0.097 Sum_probs=61.6
Q ss_pred HHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEe
Q 047247 174 AILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVI 253 (386)
Q Consensus 174 aILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v 253 (386)
.+++.+..... .|+|+|.|.|. +...|+.+ | .++|||+.. ...++.+.+++.+..-.+.-.++|..-
T Consensus 74 ~~~~~~~~~~~-~vLDlGcG~G~----~~~~l~~~--~---~~v~gvD~s---~~~~~~a~~~~~~~~~~~~~~v~~~~~ 140 (299)
T 3g2m_A 74 EFATRTGPVSG-PVLELAAGMGR----LTFPFLDL--G---WEVTALELS---TSVLAAFRKRLAEAPADVRDRCTLVQG 140 (299)
T ss_dssp HHHHHHCCCCS-CEEEETCTTTT----THHHHHTT--T---CCEEEEESC---HHHHHHHHHHHHTSCHHHHTTEEEEEC
T ss_pred HHHHhhCCCCC-cEEEEeccCCH----HHHHHHHc--C---CeEEEEECC---HHHHHHHHHHHhhcccccccceEEEeC
Confidence 34455543333 89999999997 44455555 2 589999952 334544444433211111133455443
Q ss_pred ecCCccccccccccccCCCce-EEEeecccccccccchHHHHHHHH-HhcCCcEEEEee
Q 047247 254 TGLNRLVELTKGTLGVKEDEA-VAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIVE 310 (386)
Q Consensus 254 ~~~~~~e~l~~~~L~~~~~Ea-LaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlvE 310 (386)
+++++.. ++.. +||.+...+|++....+..+|+.+ +.|+|.-.+++.
T Consensus 141 ----d~~~~~~------~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 189 (299)
T 3g2m_A 141 ----DMSAFAL------DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLS 189 (299)
T ss_dssp ----BTTBCCC------SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ----chhcCCc------CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 3444332 2222 233333456666544467777766 558998766664
No 23
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=91.40 E-value=1.8 Score=40.00 Aligned_cols=102 Identities=13% Similarity=0.130 Sum_probs=58.6
Q ss_pred CceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc--eEEEEeecCCcc
Q 047247 182 ETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP--FEFKVITGLNRL 259 (386)
Q Consensus 182 ~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip--FeF~~v~~~~~~ 259 (386)
...-+|+|+|.|.|..-..|.+.+ + .++|||+.. ...++.+.++ ++..|++ ++|... ++
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~----~----~~v~gvD~s---~~~~~~a~~~----~~~~~~~~~~~~~~~----d~ 141 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKF----G----VSIDCLNIA---PVQNKRNEEY----NNQAGLADNITVKYG----SF 141 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH----C----CEEEEEESC---HHHHHHHHHH----HHHHTCTTTEEEEEC----CT
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHh----C----CEEEEEeCC---HHHHHHHHHH----HHhcCCCcceEEEEc----Cc
Confidence 445689999999886544444433 2 389999852 2344444333 3344554 555433 34
Q ss_pred ccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEe
Q 047247 260 VELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIV 309 (386)
Q Consensus 260 e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlv 309 (386)
+++. ..++..=+|-|...|||+.. ...+|+.+ +-|+|.-.+++
T Consensus 142 ~~~~-----~~~~~fD~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~ 185 (297)
T 2o57_A 142 LEIP-----CEDNSYDFIWSQDAFLHSPD--KLKVFQECARVLKPRGVMAI 185 (297)
T ss_dssp TSCS-----SCTTCEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEE
T ss_pred ccCC-----CCCCCEeEEEecchhhhcCC--HHHHHHHHHHHcCCCeEEEE
Confidence 4432 23344445556677888854 45566555 66899854444
No 24
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=91.38 E-value=1.4 Score=40.99 Aligned_cols=111 Identities=9% Similarity=0.009 Sum_probs=61.8
Q ss_pred CceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEeecCCcccc
Q 047247 182 ETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVITGLNRLVE 261 (386)
Q Consensus 182 ~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v~~~~~~e~ 261 (386)
.+.-+|+|+|.|.|. +...|+.+- ++..++|||+. +...++.+.+++.+. ....-..+|... ++++
T Consensus 35 ~~~~~vLDiGcG~G~----~~~~la~~~--~~~~~v~gvD~---s~~~~~~a~~~~~~~-~~~~~~v~~~~~----d~~~ 100 (299)
T 3g5t_A 35 GERKLLVDVGCGPGT----ATLQMAQEL--KPFEQIIGSDL---SATMIKTAEVIKEGS-PDTYKNVSFKIS----SSDD 100 (299)
T ss_dssp SCCSEEEEETCTTTH----HHHHHHHHS--SCCSEEEEEES---CHHHHHHHHHHHHHC-C-CCTTEEEEEC----CTTC
T ss_pred CCCCEEEEECCCCCH----HHHHHHHhC--CCCCEEEEEeC---CHHHHHHHHHHHHhc-cCCCCceEEEEc----CHHh
Confidence 356789999999983 444455421 13479999995 223444444433322 011334555543 3555
Q ss_pred ccccc-cccCCCceEEEeecccccccccchHHHHHHH-HHhcCCcEEEEe
Q 047247 262 LTKGT-LGVKEDEAVAVNCIGALRRVAVEERGAVIQM-FQSLKPKVVTIV 309 (386)
Q Consensus 262 l~~~~-L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~-ir~L~P~vvvlv 309 (386)
+.... ..+..+..=+|-|...+|++ ++. .+|+. .+.|+|.-++++
T Consensus 101 ~~~~~~~~~~~~~fD~V~~~~~l~~~--~~~-~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 101 FKFLGADSVDKQKIDMITAVECAHWF--DFE-KFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp CGGGCTTTTTSSCEEEEEEESCGGGS--CHH-HHHHHHHHHEEEEEEEEE
T ss_pred CCccccccccCCCeeEEeHhhHHHHh--CHH-HHHHHHHHhcCCCcEEEE
Confidence 44321 11222455566667789998 444 45554 466899866655
No 25
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=91.35 E-value=1.2 Score=42.34 Aligned_cols=113 Identities=18% Similarity=0.103 Sum_probs=65.9
Q ss_pred HHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc--eEEE
Q 047247 174 AILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP--FEFK 251 (386)
Q Consensus 174 aILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip--FeF~ 251 (386)
.|++.+.-.+..+|+|+|.|.| .+...|+.+. |.+++|+++.| ..++.+.+++ +..|+. .+|.
T Consensus 160 ~~~~~~~~~~~~~vlDvG~G~G----~~~~~l~~~~---p~~~~~~~D~~----~~~~~a~~~~----~~~~~~~~v~~~ 224 (332)
T 3i53_A 160 GIAAKYDWAALGHVVDVGGGSG----GLLSALLTAH---EDLSGTVLDLQ----GPASAAHRRF----LDTGLSGRAQVV 224 (332)
T ss_dssp TGGGSSCCGGGSEEEEETCTTS----HHHHHHHHHC---TTCEEEEEECH----HHHHHHHHHH----HHTTCTTTEEEE
T ss_pred HHHHhCCCCCCCEEEEeCCChh----HHHHHHHHHC---CCCeEEEecCH----HHHHHHHHhh----hhcCcCcCeEEe
Confidence 4455555455679999999999 4555565553 46799999852 2444444443 334543 6665
Q ss_pred EeecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEE-Eeeec
Q 047247 252 VITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVT-IVEEE 312 (386)
Q Consensus 252 ~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvv-lvE~e 312 (386)
.-. +.+ + +.. .-++ |-|...||++.......+|+.+ +.|+|.-.+ ++|.-
T Consensus 225 ~~d----~~~--~--~p~-~~D~--v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 276 (332)
T 3i53_A 225 VGS----FFD--P--LPA-GAGG--YVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAV 276 (332)
T ss_dssp ECC----TTS--C--CCC-SCSE--EEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred cCC----CCC--C--CCC-CCcE--EEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeec
Confidence 542 221 1 111 2233 3445568988755566788877 557998544 44543
No 26
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=91.28 E-value=1.7 Score=40.46 Aligned_cols=112 Identities=12% Similarity=0.089 Sum_probs=63.2
Q ss_pred HHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEE
Q 047247 173 GAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKV 252 (386)
Q Consensus 173 qaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~ 252 (386)
..|++.+.-...-+|+|+|.|.|. +...|+.+.+ .++|||+. +...++.+.++ ++..|++-....
T Consensus 62 ~~~~~~~~~~~~~~vLDiGcG~G~----~~~~la~~~~----~~v~gvD~---s~~~~~~a~~~----~~~~~~~~~v~~ 126 (302)
T 3hem_A 62 KLALDKLNLEPGMTLLDIGCGWGS----TMRHAVAEYD----VNVIGLTL---SENQYAHDKAM----FDEVDSPRRKEV 126 (302)
T ss_dssp HHHHHTTCCCTTCEEEEETCTTSH----HHHHHHHHHC----CEEEEEEC---CHHHHHHHHHH----HHHSCCSSCEEE
T ss_pred HHHHHHcCCCCcCEEEEeeccCcH----HHHHHHHhCC----CEEEEEEC---CHHHHHHHHHH----HHhcCCCCceEE
Confidence 346666655566689999999874 4444554422 58999995 22344444333 445676622333
Q ss_pred eecCCccccccccccccCCCceEEEeeccccccccc-------chHHHHHHHH-HhcCCcEEEEe
Q 047247 253 ITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAV-------EERGAVIQMF-QSLKPKVVTIV 309 (386)
Q Consensus 253 v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~-------~~r~~vL~~i-r~L~P~vvvlv 309 (386)
+.. +++++ . ..=+.|+.+ ..+||+.. .....+|+.+ +-|+|.-.+++
T Consensus 127 ~~~--d~~~~-~-----~~fD~v~~~--~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 181 (302)
T 3hem_A 127 RIQ--GWEEF-D-----EPVDRIVSL--GAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLL 181 (302)
T ss_dssp EEC--CGGGC-C-----CCCSEEEEE--SCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEE
T ss_pred EEC--CHHHc-C-----CCccEEEEc--chHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence 322 35444 1 112344433 56888842 3445677665 56899866655
No 27
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=91.11 E-value=0.81 Score=41.10 Aligned_cols=122 Identities=11% Similarity=0.162 Sum_probs=67.9
Q ss_pred hHHHHHHHHHHHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHH
Q 047247 163 WTTFGHVASNGAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFAR 242 (386)
Q Consensus 163 ~~kfa~~tANqaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~ 242 (386)
++.-+.......+++.+.-.+.-+|+|+|.|.|. +...|+.+.+ .++|||+.. ...++.+.+++...
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~~~----~~v~~vD~s---~~~~~~a~~~~~~~-- 101 (266)
T 3ujc_A 35 YISSGGLEATKKILSDIELNENSKVLDIGSGLGG----GCMYINEKYG----AHTHGIDIC---SNIVNMANERVSGN-- 101 (266)
T ss_dssp CCSTTHHHHHHHHTTTCCCCTTCEEEEETCTTSH----HHHHHHHHHC----CEEEEEESC---HHHHHHHHHTCCSC--
T ss_pred ccccchHHHHHHHHHhcCCCCCCEEEEECCCCCH----HHHHHHHHcC----CEEEEEeCC---HHHHHHHHHHhhcC--
Confidence 3333444455777888876667799999999874 3334444321 589999952 22333322222111
Q ss_pred HcCCceEEEEeecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEe
Q 047247 243 LMGVPFEFKVITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIV 309 (386)
Q Consensus 243 ~lgipFeF~~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlv 309 (386)
-..+|... ++.++. ..++..=+|-|...|||+.......+|+.+ +-|+|.-.+++
T Consensus 102 ---~~~~~~~~----d~~~~~-----~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~ 157 (266)
T 3ujc_A 102 ---NKIIFEAN----DILTKE-----FPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLI 157 (266)
T ss_dssp ---TTEEEEEC----CTTTCC-----CCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ---CCeEEEEC----ccccCC-----CCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEE
Confidence 23444432 233332 223444455566678998644556666665 56899755544
No 28
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=90.87 E-value=2.8 Score=38.02 Aligned_cols=125 Identities=15% Similarity=0.093 Sum_probs=65.5
Q ss_pred HHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccch---HHHHHHHHHHHHHHHHHcCCc--
Q 047247 173 GAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLV---RLVMKEIGQRMEKFARLMGVP-- 247 (386)
Q Consensus 173 qaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~---~~~l~etg~rL~~fA~~lgip-- 247 (386)
..|++.+.-.+.-+|+|+|.|.|.- ...|+.+. .|..++|||+..... ...++.+.+++ +..|++
T Consensus 33 ~~l~~~~~~~~~~~vLDiGcG~G~~----~~~l~~~~--g~~~~v~gvD~s~~~~~~~~~~~~a~~~~----~~~~~~~~ 102 (275)
T 3bkx_A 33 LAIAEAWQVKPGEKILEIGCGQGDL----SAVLADQV--GSSGHVTGIDIASPDYGAPLTLGQAWNHL----LAGPLGDR 102 (275)
T ss_dssp HHHHHHHTCCTTCEEEEESCTTSHH----HHHHHHHH--CTTCEEEEECSSCTTCCSSSCHHHHHHHH----HTSTTGGG
T ss_pred HHHHHHcCCCCCCEEEEeCCCCCHH----HHHHHHHh--CCCCEEEEEECCccccccHHHHHHHHHHH----HhcCCCCc
Confidence 3556665544556899999998853 33344432 244699999963210 01244343333 334442
Q ss_pred eEEEEeecCCccccccccccccCCC--ceEEEeecccccccccchHHHHHHHHHhcCC--cEEEEeeecCCCCC
Q 047247 248 FEFKVITGLNRLVELTKGTLGVKED--EAVAVNCIGALRRVAVEERGAVIQMFQSLKP--KVVTIVEEEADLTS 317 (386)
Q Consensus 248 FeF~~v~~~~~~e~l~~~~L~~~~~--EaLaVN~~~~Lh~l~~~~r~~vL~~ir~L~P--~vvvlvE~ea~~n~ 317 (386)
.+|... + ++....+...++ +.|+ |...|||+.. + +.+++.++.+.| ..+++.+.....+.
T Consensus 103 v~~~~~----d--~~~~~~~~~~~~~fD~v~--~~~~l~~~~~-~-~~~~~~~~~l~~~gG~l~~~~~~~~~~~ 166 (275)
T 3bkx_A 103 LTVHFN----T--NLSDDLGPIADQHFDRVV--LAHSLWYFAS-A-NALALLFKNMAAVCDHVDVAEWSMQPTA 166 (275)
T ss_dssp EEEECS----C--CTTTCCGGGTTCCCSEEE--EESCGGGSSC-H-HHHHHHHHHHTTTCSEEEEEEECSSCSS
T ss_pred eEEEEC----C--hhhhccCCCCCCCEEEEE--EccchhhCCC-H-HHHHHHHHHHhCCCCEEEEEEecCCCCc
Confidence 444322 1 111122222222 3444 4555788753 3 348899999877 46666666554443
No 29
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=90.76 E-value=1.5 Score=39.31 Aligned_cols=110 Identities=17% Similarity=0.208 Sum_probs=61.4
Q ss_pred HHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc--eEE
Q 047247 173 GAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP--FEF 250 (386)
Q Consensus 173 qaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip--FeF 250 (386)
..|++.+.-...-+|+|+|.|.|.. ...|+.+.+ .++|||+.. ...++.+. +.++..|+. .+|
T Consensus 26 ~~l~~~~~~~~~~~VLDiGcG~G~~----~~~la~~~~----~~v~gvD~s---~~~l~~a~----~~~~~~~~~~~v~~ 90 (256)
T 1nkv_A 26 ATLGRVLRMKPGTRILDLGSGSGEM----LCTWARDHG----ITGTGIDMS---SLFTAQAK----RRAEELGVSERVHF 90 (256)
T ss_dssp HHHHHHTCCCTTCEEEEETCTTCHH----HHHHHHHTC----CEEEEEESC---HHHHHHHH----HHHHHTTCTTTEEE
T ss_pred HHHHHhcCCCCCCEEEEECCCCCHH----HHHHHHhcC----CeEEEEeCC---HHHHHHHH----HHHHhcCCCcceEE
Confidence 3445555444455899999999863 334444332 378999852 23444333 334456664 666
Q ss_pred EEeecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEe
Q 047247 251 KVITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIV 309 (386)
Q Consensus 251 ~~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlv 309 (386)
... +++++.. ++..=+|-|...+||+. ++ ..+|+.+ +-|+|.-.+++
T Consensus 91 ~~~----d~~~~~~------~~~fD~V~~~~~~~~~~-~~-~~~l~~~~r~LkpgG~l~~ 138 (256)
T 1nkv_A 91 IHN----DAAGYVA------NEKCDVAACVGATWIAG-GF-AGAEELLAQSLKPGGIMLI 138 (256)
T ss_dssp EES----CCTTCCC------SSCEEEEEEESCGGGTS-SS-HHHHHHHTTSEEEEEEEEE
T ss_pred EEC----ChHhCCc------CCCCCEEEECCChHhcC-CH-HHHHHHHHHHcCCCeEEEE
Confidence 543 3444432 23333444566678775 33 4555555 56799865554
No 30
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=90.67 E-value=5.4 Score=35.54 Aligned_cols=109 Identities=13% Similarity=0.138 Sum_probs=62.3
Q ss_pred HHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc-eEEEE
Q 047247 174 AILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP-FEFKV 252 (386)
Q Consensus 174 aILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip-FeF~~ 252 (386)
-+++.+.-.+.-+|+|+|.|.|. +...|+.+. + ++|||+.. ...++.+.++ ++..|++ ++|..
T Consensus 12 ~~~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~--~---~v~~vD~s---~~~~~~a~~~----~~~~~~~~v~~~~ 75 (239)
T 1xxl_A 12 LMIKTAECRAEHRVLDIGAGAGH----TALAFSPYV--Q---ECIGVDAT---KEMVEVASSF----AQEKGVENVRFQQ 75 (239)
T ss_dssp HHHHHHTCCTTCEEEEESCTTSH----HHHHHGGGS--S---EEEEEESC---HHHHHHHHHH----HHHHTCCSEEEEE
T ss_pred hHHHHhCcCCCCEEEEEccCcCH----HHHHHHHhC--C---EEEEEECC---HHHHHHHHHH----HHHcCCCCeEEEe
Confidence 34455555566689999999985 445566552 2 89999952 2344443333 3344554 44443
Q ss_pred eecCCccccccccccccCCCceEEEeecccccccccchHHHHHHH-HHhcCCcEEEEe
Q 047247 253 ITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQM-FQSLKPKVVTIV 309 (386)
Q Consensus 253 v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~-ir~L~P~vvvlv 309 (386)
. +++++. ..++..=+|-|...+||+. ++. .+|+. .+-|+|.-.+++
T Consensus 76 ~----d~~~~~-----~~~~~fD~v~~~~~l~~~~-~~~-~~l~~~~~~LkpgG~l~~ 122 (239)
T 1xxl_A 76 G----TAESLP-----FPDDSFDIITCRYAAHHFS-DVR-KAVREVARVLKQDGRFLL 122 (239)
T ss_dssp C----BTTBCC-----SCTTCEEEEEEESCGGGCS-CHH-HHHHHHHHHEEEEEEEEE
T ss_pred c----ccccCC-----CCCCcEEEEEECCchhhcc-CHH-HHHHHHHHHcCCCcEEEE
Confidence 2 344432 2334344455666788874 444 45554 567899866555
No 31
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=90.56 E-value=3.3 Score=39.24 Aligned_cols=108 Identities=9% Similarity=-0.008 Sum_probs=59.9
Q ss_pred eeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCC-------ceEEEEeecC
Q 047247 184 KLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGV-------PFEFKVITGL 256 (386)
Q Consensus 184 ~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgi-------pFeF~~v~~~ 256 (386)
.-+|+|+|.|.|.- +..++.+. + -++|||+. +...++.+.++..+ .++ .++|......
T Consensus 49 ~~~VLDlGCG~G~~----l~~~~~~~-~---~~v~GiD~---S~~~l~~A~~~~~~----~~~~~~~~~~~~~f~~~d~~ 113 (302)
T 2vdw_A 49 KRKVLAIDFGNGAD----LEKYFYGE-I---ALLVATDP---DADAIARGNERYNK----LNSGIKTKYYKFDYIQETIR 113 (302)
T ss_dssp CCEEEETTCTTTTT----HHHHHHTT-C---SEEEEEES---CHHHHHHHHHHHHH----HCC----CCCEEEEEECCTT
T ss_pred CCeEEEEecCCcHh----HHHHHhcC-C---CeEEEEEC---CHHHHHHHHHHHHh----ccccccccccccchhhhhcc
Confidence 45799999999852 22233332 1 37999996 33456666555432 333 2455543210
Q ss_pred Ccc--ccccccccccCCCceEEEeeccccccccc-chHHHHHHHH-HhcCCcEEEEe
Q 047247 257 NRL--VELTKGTLGVKEDEAVAVNCIGALRRVAV-EERGAVIQMF-QSLKPKVVTIV 309 (386)
Q Consensus 257 ~~~--e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~-~~r~~vL~~i-r~L~P~vvvlv 309 (386)
.+. +++.. ...++..=+|.|++.||++.. ..+..+|+.+ +.|+|.-++++
T Consensus 114 ~d~~~~~l~~---~~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~ 167 (302)
T 2vdw_A 114 SDTFVSSVRE---VFYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLI 167 (302)
T ss_dssp SSSHHHHHHT---TCCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEE
T ss_pred cchhhhhhhc---cccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 000 11110 012344556778889998642 2456777766 55899866654
No 32
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=90.46 E-value=2.7 Score=35.30 Aligned_cols=113 Identities=18% Similarity=0.058 Sum_probs=61.6
Q ss_pred HHHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc---e
Q 047247 172 NGAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP---F 248 (386)
Q Consensus 172 NqaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip---F 248 (386)
.+.+++.+.-.+.-+|+|+|.|.|. +...|+.+ ..+++||+.. ...++.+.+ .++..|++ +
T Consensus 41 ~~~l~~~~~~~~~~~vLdiG~G~G~----~~~~~~~~-----~~~v~~~D~~---~~~~~~a~~----~~~~~~~~~~~~ 104 (194)
T 1dus_A 41 TKILVENVVVDKDDDILDLGCGYGV----IGIALADE-----VKSTTMADIN---RRAIKLAKE----NIKLNNLDNYDI 104 (194)
T ss_dssp HHHHHHHCCCCTTCEEEEETCTTSH----HHHHHGGG-----SSEEEEEESC---HHHHHHHHH----HHHHTTCTTSCE
T ss_pred HHHHHHHcccCCCCeEEEeCCCCCH----HHHHHHHc-----CCeEEEEECC---HHHHHHHHH----HHHHcCCCccce
Confidence 4556666665566689999999873 44456665 2489999852 233433333 33445665 5
Q ss_pred EEEEeecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEeee
Q 047247 249 EFKVITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIVEE 311 (386)
Q Consensus 249 eF~~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlvE~ 311 (386)
+|... ++.+..+ -..=+.|+.|.. +|+.. .....+|+.+ +.|+|.-.+++..
T Consensus 105 ~~~~~----d~~~~~~----~~~~D~v~~~~~--~~~~~-~~~~~~l~~~~~~L~~gG~l~~~~ 157 (194)
T 1dus_A 105 RVVHS----DLYENVK----DRKYNKIITNPP--IRAGK-EVLHRIIEEGKELLKDNGEIWVVI 157 (194)
T ss_dssp EEEEC----STTTTCT----TSCEEEEEECCC--STTCH-HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEC----chhcccc----cCCceEEEECCC--cccch-hHHHHHHHHHHHHcCCCCEEEEEE
Confidence 55443 2332111 111245555543 44321 2344556554 6689987666644
No 33
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=90.46 E-value=2.5 Score=38.72 Aligned_cols=105 Identities=19% Similarity=0.160 Sum_probs=57.2
Q ss_pred HHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEe
Q 047247 174 AILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVI 253 (386)
Q Consensus 174 aILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v 253 (386)
.+++.+.-...-.|+|+|.|.|.-. ..|+. + ..++|||+.. ...++.+.+++ -+ ++|...
T Consensus 48 ~l~~~l~~~~~~~vLDiGcG~G~~~----~~l~~-~----~~~v~gvD~s---~~~~~~a~~~~------~~--~~~~~~ 107 (279)
T 3ccf_A 48 DLLQLLNPQPGEFILDLGCGTGQLT----EKIAQ-S----GAEVLGTDNA---ATMIEKARQNY------PH--LHFDVA 107 (279)
T ss_dssp HHHHHHCCCTTCEEEEETCTTSHHH----HHHHH-T----TCEEEEEESC---HHHHHHHHHHC------TT--SCEEEC
T ss_pred HHHHHhCCCCCCEEEEecCCCCHHH----HHHHh-C----CCeEEEEECC---HHHHHHHHhhC------CC--CEEEEC
Confidence 4455555445568999999998533 34444 2 3589999952 22343333322 13 333332
Q ss_pred ecCCccccccccccccCCCceEEEeecccccccccchHHHHHHH-HHhcCCcEEEEee
Q 047247 254 TGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQM-FQSLKPKVVTIVE 310 (386)
Q Consensus 254 ~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~-ir~L~P~vvvlvE 310 (386)
+++++.. ++..=+|-|...||++. ++. .+|+. .+.|+|.-.+++.
T Consensus 108 ----d~~~~~~------~~~fD~v~~~~~l~~~~-d~~-~~l~~~~~~LkpgG~l~~~ 153 (279)
T 3ccf_A 108 ----DARNFRV------DKPLDAVFSNAMLHWVK-EPE-AAIASIHQALKSGGRFVAE 153 (279)
T ss_dssp ----CTTTCCC------SSCEEEEEEESCGGGCS-CHH-HHHHHHHHHEEEEEEEEEE
T ss_pred ----ChhhCCc------CCCcCEEEEcchhhhCc-CHH-HHHHHHHHhcCCCcEEEEE
Confidence 3444331 23333444556688874 443 45554 4678998766654
No 34
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=90.45 E-value=2.5 Score=40.43 Aligned_cols=137 Identities=11% Similarity=0.090 Sum_probs=80.9
Q ss_pred HHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEE
Q 047247 173 GAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKV 252 (386)
Q Consensus 173 qaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~ 252 (386)
..|++.+.. --.|+|+|.|.|. |--.++. .+|..++++++- +...+ +.+.+++..+|+++.|..
T Consensus 124 ~~i~~~i~~--p~~VLDLGCG~Gp----LAl~~~~---~~p~a~y~a~DI---d~~~l----e~a~~~l~~~g~~~~~~v 187 (281)
T 3lcv_B 124 RELFRHLPR--PNTLRDLACGLNP----LAAPWMG---LPAETVYIASDI---DARLV----GFVDEALTRLNVPHRTNV 187 (281)
T ss_dssp HHHGGGSCC--CSEEEETTCTTGG----GCCTTTT---CCTTCEEEEEES---BHHHH----HHHHHHHHHTTCCEEEEE
T ss_pred HHHHhccCC--CceeeeeccCccH----HHHHHHh---hCCCCEEEEEeC---CHHHH----HHHHHHHHhcCCCceEEE
Confidence 356666644 3378999999763 1111111 337789999985 22344 344456677899987765
Q ss_pred eecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHHHhcCCcEEEEeeecCCCCCCccchHHHHHHHHHH
Q 047247 253 ITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMFQSLKPKVVTIVEEEADLTSSRYDFVKCFEECLRF 332 (386)
Q Consensus 253 v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~ir~L~P~vvvlvE~ea~~n~~~~~F~~RF~eaL~~ 332 (386)
.. +.... .-.+++++.+|-. +|+|....+...++.+..|+|..|++.=+-=..+++ =..--..
T Consensus 188 ~D-------~~~~~-p~~~~DvaL~lkt--i~~Le~q~kg~g~~ll~aL~~~~vvVSfp~ksl~Gr-------s~gm~~~ 250 (281)
T 3lcv_B 188 AD-------LLEDR-LDEPADVTLLLKT--LPCLETQQRGSGWEVIDIVNSPNIVVTFPTKSLGQR-------SKGMFQN 250 (281)
T ss_dssp CC-------TTTSC-CCSCCSEEEETTC--HHHHHHHSTTHHHHHHHHSSCSEEEEEEECC--------------CHHHH
T ss_pred ee-------ecccC-CCCCcchHHHHHH--HHHhhhhhhHHHHHHHHHhCCCCEEEeccchhhcCC-------CcchhhH
Confidence 42 11111 1233455555554 888876667777899999999999988444222222 1222367
Q ss_pred HHHHHHHhhh
Q 047247 333 YTLYFEMLEE 342 (386)
Q Consensus 333 YsalFDsLda 342 (386)
|+..|+..=.
T Consensus 251 Y~~~~e~~~~ 260 (281)
T 3lcv_B 251 YSQSFESQAR 260 (281)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888887543
No 35
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=90.34 E-value=0.93 Score=39.24 Aligned_cols=97 Identities=9% Similarity=0.018 Sum_probs=56.5
Q ss_pred eeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEeecCCcccccc
Q 047247 184 KLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVITGLNRLVELT 263 (386)
Q Consensus 184 ~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v~~~~~~e~l~ 263 (386)
.-.|+|+|.|.|. +...|+.+ | .++|||+.. ...++.+.++ .-..+|... +++++.
T Consensus 42 ~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~s---~~~~~~a~~~--------~~~~~~~~~----d~~~~~ 97 (203)
T 3h2b_A 42 DGVILDVGSGTGR----WTGHLASL--G---HQIEGLEPA---TRLVELARQT--------HPSVTFHHG----TITDLS 97 (203)
T ss_dssp CSCEEEETCTTCH----HHHHHHHT--T---CCEEEECCC---HHHHHHHHHH--------CTTSEEECC----CGGGGG
T ss_pred CCeEEEecCCCCH----HHHHHHhc--C---CeEEEEeCC---HHHHHHHHHh--------CCCCeEEeC----cccccc
Confidence 4579999999985 55666666 2 389999952 2233333322 223333322 344432
Q ss_pred ccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEe
Q 047247 264 KGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIV 309 (386)
Q Consensus 264 ~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlv 309 (386)
..++..=+|-|...|||+.......+|+.+ +.|+|.-.+++
T Consensus 98 -----~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i 139 (203)
T 3h2b_A 98 -----DSPKRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLM 139 (203)
T ss_dssp -----GSCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEE
T ss_pred -----cCCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 233434445556678998755566677665 56899865555
No 36
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=89.99 E-value=2.8 Score=39.20 Aligned_cols=110 Identities=11% Similarity=0.091 Sum_probs=61.7
Q ss_pred HHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc--eEE
Q 047247 173 GAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP--FEF 250 (386)
Q Consensus 173 qaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip--FeF 250 (386)
..|++.+.-.+.-+|+|+|.|.|. +...|+.+.+ .++|||+.. ...++.+.++ ++..|+. .+|
T Consensus 80 ~~~~~~~~~~~~~~vLDiGcG~G~----~~~~la~~~~----~~v~gvD~s---~~~~~~a~~~----~~~~~~~~~v~~ 144 (318)
T 2fk8_A 80 DLNLDKLDLKPGMTLLDIGCGWGT----TMRRAVERFD----VNVIGLTLS---KNQHARCEQV----LASIDTNRSRQV 144 (318)
T ss_dssp HHHHTTSCCCTTCEEEEESCTTSH----HHHHHHHHHC----CEEEEEESC---HHHHHHHHHH----HHTSCCSSCEEE
T ss_pred HHHHHhcCCCCcCEEEEEcccchH----HHHHHHHHCC----CEEEEEECC---HHHHHHHHHH----HHhcCCCCceEE
Confidence 456666655556689999999874 3344444422 389999952 2334333333 3445654 444
Q ss_pred EEeecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEe
Q 047247 251 KVITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIV 309 (386)
Q Consensus 251 ~~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlv 309 (386)
... +++++. ..=+.|+ |...|||+.......+|+.+ +-|+|.-.+++
T Consensus 145 ~~~----d~~~~~------~~fD~v~--~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 192 (318)
T 2fk8_A 145 LLQ----GWEDFA------EPVDRIV--SIEAFEHFGHENYDDFFKRCFNIMPADGRMTV 192 (318)
T ss_dssp EES----CGGGCC------CCCSEEE--EESCGGGTCGGGHHHHHHHHHHHSCTTCEEEE
T ss_pred EEC----ChHHCC------CCcCEEE--EeChHHhcCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 332 344442 1113433 44568888644455666665 66899855544
No 37
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=89.98 E-value=0.61 Score=43.00 Aligned_cols=118 Identities=13% Similarity=0.111 Sum_probs=62.2
Q ss_pred HHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcC-CceEEEEe
Q 047247 175 ILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMG-VPFEFKVI 253 (386)
Q Consensus 175 ILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lg-ipFeF~~v 253 (386)
|++.+.....-+|+|+|.|.|. +...|+.+ |+ ++|||+.. ...++.+.+++.+.....+ ..++|..-
T Consensus 49 l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~--~~---~v~gvD~s---~~~l~~a~~~~~~~~~~~~~~~~~~~~~ 116 (293)
T 3thr_A 49 LLGLLRQHGCHRVLDVACGTGV----DSIMLVEE--GF---SVTSVDAS---DKMLKYALKERWNRRKEPAFDKWVIEEA 116 (293)
T ss_dssp HHHHHHHTTCCEEEETTCTTSH----HHHHHHHT--TC---EEEEEESC---HHHHHHHHHHHHHTTTSHHHHTCEEEEC
T ss_pred HHHHhcccCCCEEEEecCCCCH----HHHHHHHC--CC---eEEEEECC---HHHHHHHHHhhhhcccccccceeeEeec
Confidence 3333333345689999999985 34455555 32 99999952 3345444444322111111 12333322
Q ss_pred ecCCccccccccccccCCCceEEEeec-cccccccc-----chHHHHHHHH-HhcCCcEEEEee
Q 047247 254 TGLNRLVELTKGTLGVKEDEAVAVNCI-GALRRVAV-----EERGAVIQMF-QSLKPKVVTIVE 310 (386)
Q Consensus 254 ~~~~~~e~l~~~~L~~~~~EaLaVN~~-~~Lh~l~~-----~~r~~vL~~i-r~L~P~vvvlvE 310 (386)
++.++..+ + ..++..=+|-|. ..|||+.. .....+|+.+ +.|+|.-++++.
T Consensus 117 ----d~~~~~~~-~-~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (293)
T 3thr_A 117 ----NWLTLDKD-V-PAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVID 174 (293)
T ss_dssp ----CGGGHHHH-S-CCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred ----ChhhCccc-c-ccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 23333211 1 223344445555 67888875 3356677766 558998666553
No 38
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=89.97 E-value=12 Score=34.65 Aligned_cols=108 Identities=12% Similarity=0.117 Sum_probs=60.6
Q ss_pred eEEeeccCCC---CCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEeecCCcccc
Q 047247 185 LHIIDMSNTL---CTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVITGLNRLVE 261 (386)
Q Consensus 185 VHIIDf~i~~---G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v~~~~~~e~ 261 (386)
-+|+|+|.|. |. +..+++ .+. |..+||+|+.. ...++...+++.. .-..+|... ++.+
T Consensus 79 ~~vLDlGcG~pt~G~-~~~~~~---~~~---p~~~v~~vD~s---p~~l~~Ar~~~~~-----~~~v~~~~~----D~~~ 139 (274)
T 2qe6_A 79 SQFLDLGSGLPTVQN-THEVAQ---SVN---PDARVVYVDID---PMVLTHGRALLAK-----DPNTAVFTA----DVRD 139 (274)
T ss_dssp CEEEEETCCSCCSSC-HHHHHH---HHC---TTCEEEEEESS---HHHHHHHHHHHTT-----CTTEEEEEC----CTTC
T ss_pred CEEEEECCCCCCCCh-HHHHHH---HhC---CCCEEEEEECC---hHHHHHHHHhcCC-----CCCeEEEEe----eCCC
Confidence 4899999999 73 333333 221 34799999952 2345444444421 112444433 3433
Q ss_pred cccc----c--cccCCCceEEEeecccccccccchHHHHHHHHHh-cCCcEEEE-eee
Q 047247 262 LTKG----T--LGVKEDEAVAVNCIGALRRVAVEERGAVIQMFQS-LKPKVVTI-VEE 311 (386)
Q Consensus 262 l~~~----~--L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~ir~-L~P~vvvl-vE~ 311 (386)
.... . -.+..+...+|-+...||++.......+|+.+++ |+|.-.++ ++.
T Consensus 140 ~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~ 197 (274)
T 2qe6_A 140 PEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSL 197 (274)
T ss_dssp HHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred chhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEe
Confidence 2110 0 0122235667778888999986556778887765 89975444 444
No 39
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=89.78 E-value=1.9 Score=37.33 Aligned_cols=108 Identities=18% Similarity=0.126 Sum_probs=61.3
Q ss_pred HHHHHhhcC-CCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcC-CceE
Q 047247 172 NGAILEALD-GETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMG-VPFE 249 (386)
Q Consensus 172 NqaILeA~~-g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lg-ipFe 249 (386)
...+++.+. -...-+|+|+|.|.|. +...|+.+ | .++|||+.. ...+ +.|+..| -..+
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G~G~----~~~~l~~~--~---~~v~~~D~s---~~~~--------~~a~~~~~~~~~ 93 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASGTGY----WTRHLSGL--A---DRVTALDGS---AEMI--------AEAGRHGLDNVE 93 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCTTSH----HHHHHHHH--S---SEEEEEESC---HHHH--------HHHGGGCCTTEE
T ss_pred HHHHHHHHhcCCCCCeEEEECCCCCH----HHHHHHhc--C---CeEEEEeCC---HHHH--------HHHHhcCCCCeE
Confidence 445666665 2333489999999985 44445554 2 489999952 2223 2333355 2344
Q ss_pred EEEeecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEe
Q 047247 250 FKVITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIV 309 (386)
Q Consensus 250 F~~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlv 309 (386)
|... +++++ ..++..=+|-|...|||+....+..+|+.+ +.|+|.-.+++
T Consensus 94 ~~~~----d~~~~------~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~ 144 (218)
T 3ou2_A 94 FRQQ----DLFDW------TPDRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEF 144 (218)
T ss_dssp EEEC----CTTSC------CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEec----ccccC------CCCCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 4433 34333 123333345556678998754456777766 56899755544
No 40
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=89.68 E-value=1.4 Score=38.46 Aligned_cols=96 Identities=19% Similarity=0.233 Sum_probs=56.9
Q ss_pred eeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEeecCCcccccc
Q 047247 184 KLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVITGLNRLVELT 263 (386)
Q Consensus 184 ~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v~~~~~~e~l~ 263 (386)
.-.|+|+|.|.|. +...|+.+ | .++|||+.. ...++.+.+++ ++.+ ... +++++.
T Consensus 44 ~~~vLDiGcG~G~----~~~~l~~~--~---~~v~~vD~s---~~~~~~a~~~~-------~~~~--~~~----d~~~~~ 98 (211)
T 3e23_A 44 GAKILELGCGAGY----QAEAMLAA--G---FDVDATDGS---PELAAEASRRL-------GRPV--RTM----LFHQLD 98 (211)
T ss_dssp TCEEEESSCTTSH----HHHHHHHT--T---CEEEEEESC---HHHHHHHHHHH-------TSCC--EEC----CGGGCC
T ss_pred CCcEEEECCCCCH----HHHHHHHc--C---CeEEEECCC---HHHHHHHHHhc-------CCce--EEe----eeccCC
Confidence 3479999999885 55566665 2 489999952 23444444333 4443 221 233333
Q ss_pred ccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEee
Q 047247 264 KGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIVE 310 (386)
Q Consensus 264 ~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlvE 310 (386)
.++..=+|-|...|||+.......+|+.+ +.|+|.-++++.
T Consensus 99 ------~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 140 (211)
T 3e23_A 99 ------AIDAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYAS 140 (211)
T ss_dssp ------CCSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ------CCCcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 22333345566778988755556677666 567998666654
No 41
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=89.59 E-value=2.9 Score=36.41 Aligned_cols=109 Identities=12% Similarity=0.129 Sum_probs=63.8
Q ss_pred HHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEe
Q 047247 174 AILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVI 253 (386)
Q Consensus 174 aILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v 253 (386)
.|...+...+.-.|+|+|.|.| .+...|+.+ + -++|||+.. ...++.+.+++.+ .+ .++|...
T Consensus 42 ~l~~~~~~~~~~~vLDiGcG~G----~~~~~l~~~--~---~~v~~vD~s---~~~~~~a~~~~~~----~~-~~~~~~~ 104 (216)
T 3ofk_A 42 LLRLSLSSGAVSNGLEIGCAAG----AFTEKLAPH--C---KRLTVIDVM---PRAIGRACQRTKR----WS-HISWAAT 104 (216)
T ss_dssp HHHHHTTTSSEEEEEEECCTTS----HHHHHHGGG--E---EEEEEEESC---HHHHHHHHHHTTT----CS-SEEEEEC
T ss_pred HHHHHcccCCCCcEEEEcCCCC----HHHHHHHHc--C---CEEEEEECC---HHHHHHHHHhccc----CC-CeEEEEc
Confidence 4444556667789999999998 355566665 2 489999952 2344444433322 22 3444433
Q ss_pred ecCCccccccccccccCCCceEEEeeccccccccc-chHHHHHHHH-HhcCCcEEEEe
Q 047247 254 TGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAV-EERGAVIQMF-QSLKPKVVTIV 309 (386)
Q Consensus 254 ~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~-~~r~~vL~~i-r~L~P~vvvlv 309 (386)
+++++.+ ++..=+|-|...|||+.. .....+|+.+ +.|+|.-++++
T Consensus 105 ----d~~~~~~------~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~ 152 (216)
T 3ofk_A 105 ----DILQFST------AELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVF 152 (216)
T ss_dssp ----CTTTCCC------SCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred ----chhhCCC------CCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 3444431 233334455577888863 3344556655 66899877666
No 42
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=89.57 E-value=3.9 Score=36.43 Aligned_cols=111 Identities=15% Similarity=0.124 Sum_probs=60.1
Q ss_pred HHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEee
Q 047247 175 ILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVIT 254 (386)
Q Consensus 175 ILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v~ 254 (386)
+++.....+.-+|+|+|.|.|. +...|+.+ | .++|||+. +...++.+.+++ +..|+.++|...
T Consensus 33 ~~~~~~~~~~~~vLDlGcG~G~----~~~~l~~~--~---~~v~gvD~---s~~~l~~a~~~~----~~~~~~v~~~~~- 95 (252)
T 1wzn_A 33 IFKEDAKREVRRVLDLACGTGI----PTLELAER--G---YEVVGLDL---HEEMLRVARRKA----KERNLKIEFLQG- 95 (252)
T ss_dssp HHHHTCSSCCCEEEEETCTTCH----HHHHHHHT--T---CEEEEEES---CHHHHHHHHHHH----HHTTCCCEEEES-
T ss_pred HHHHhcccCCCEEEEeCCCCCH----HHHHHHHC--C---CeEEEEEC---CHHHHHHHHHHH----HhcCCceEEEEC-
Confidence 3444433445689999999984 44455555 2 48999995 233454444433 344655555443
Q ss_pred cCCccccccccccccCCCceEEEeecc-cccccccchHHHHHHHH-HhcCCcEEEEeee
Q 047247 255 GLNRLVELTKGTLGVKEDEAVAVNCIG-ALRRVAVEERGAVIQMF-QSLKPKVVTIVEE 311 (386)
Q Consensus 255 ~~~~~e~l~~~~L~~~~~EaLaVN~~~-~Lh~l~~~~r~~vL~~i-r~L~P~vvvlvE~ 311 (386)
++.++... +..=+|-|.+ .++++.......+|+.+ +.|+|.-+++++-
T Consensus 96 ---d~~~~~~~------~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 96 ---DVLEIAFK------NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp ---CGGGCCCC------SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---ChhhcccC------CCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEec
Confidence 34443321 2221222332 33444333455666665 5689998877753
No 43
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=89.53 E-value=2.8 Score=37.31 Aligned_cols=114 Identities=11% Similarity=0.096 Sum_probs=62.6
Q ss_pred HHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEE
Q 047247 173 GAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKV 252 (386)
Q Consensus 173 qaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~ 252 (386)
..+++.+...+.-+|+|+|.|.|.- ...|+.+. ..++|||+.. ...++.+.+++.+. -..+|..
T Consensus 83 ~~~l~~l~~~~~~~vLDiG~G~G~~----~~~l~~~~----~~~v~~vD~s---~~~~~~a~~~~~~~-----~~~~~~~ 146 (254)
T 1xtp_A 83 RNFIASLPGHGTSRALDCGAGIGRI----TKNLLTKL----YATTDLLEPV---KHMLEEAKRELAGM-----PVGKFIL 146 (254)
T ss_dssp HHHHHTSTTCCCSEEEEETCTTTHH----HHHTHHHH----CSEEEEEESC---HHHHHHHHHHTTTS-----SEEEEEE
T ss_pred HHHHHhhcccCCCEEEEECCCcCHH----HHHHHHhh----cCEEEEEeCC---HHHHHHHHHHhccC-----CceEEEE
Confidence 5566666655667999999999863 33333331 2479999852 23344333332211 2233432
Q ss_pred eecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEeee
Q 047247 253 ITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIVEE 311 (386)
Q Consensus 253 v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlvE~ 311 (386)
. +++++. ..++..=+|-|...|||+.......+|+.+ +.|+|.-++++..
T Consensus 147 ~----d~~~~~-----~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 197 (254)
T 1xtp_A 147 A----SMETAT-----LPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKE 197 (254)
T ss_dssp S----CGGGCC-----CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred c----cHHHCC-----CCCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 2 344432 223333344455678988644455666655 6689986655543
No 44
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=89.50 E-value=2.5 Score=37.53 Aligned_cols=99 Identities=12% Similarity=-0.040 Sum_probs=57.1
Q ss_pred eEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcC--CceEEEEeecCCccccc
Q 047247 185 LHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMG--VPFEFKVITGLNRLVEL 262 (386)
Q Consensus 185 VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lg--ipFeF~~v~~~~~~e~l 262 (386)
-.|+|+|.|.|. +...|+. +..++|||+.. ...++.+.+++. ..+ -.++|... ++.++
T Consensus 68 ~~vLDiGcG~G~----~~~~l~~-----~~~~v~gvD~s---~~~~~~a~~~~~----~~~~~~~v~~~~~----d~~~~ 127 (235)
T 3lcc_A 68 GRALVPGCGGGH----DVVAMAS-----PERFVVGLDIS---ESALAKANETYG----SSPKAEYFSFVKE----DVFTW 127 (235)
T ss_dssp EEEEEETCTTCH----HHHHHCB-----TTEEEEEECSC---HHHHHHHHHHHT----TSGGGGGEEEECC----CTTTC
T ss_pred CCEEEeCCCCCH----HHHHHHh-----CCCeEEEEECC---HHHHHHHHHHhh----ccCCCcceEEEEC----chhcC
Confidence 499999999984 3445554 24689999952 234444444332 222 22444332 34443
Q ss_pred cccccccCCCceEEEeecccccccccchHHHHHHHHHh-cCCcEEEEe
Q 047247 263 TKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMFQS-LKPKVVTIV 309 (386)
Q Consensus 263 ~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~ir~-L~P~vvvlv 309 (386)
.+. +..=+|-|...||++....+..+|+.+++ |+|.-.+++
T Consensus 128 ~~~------~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 169 (235)
T 3lcc_A 128 RPT------ELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELIT 169 (235)
T ss_dssp CCS------SCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEE
T ss_pred CCC------CCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEE
Confidence 322 12223445566888876667778877755 899876655
No 45
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=89.45 E-value=7.9 Score=35.00 Aligned_cols=103 Identities=13% Similarity=0.168 Sum_probs=58.9
Q ss_pred CceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc-eEEEEeecCCccc
Q 047247 182 ETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP-FEFKVITGLNRLV 260 (386)
Q Consensus 182 ~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip-FeF~~v~~~~~~e 260 (386)
.+.-+|+|+|.|.|. +...|+.+. |..++|||+.. ...++.+.+ .++..|++ .+|... +++
T Consensus 36 ~~~~~vLDiG~G~G~----~~~~l~~~~---~~~~v~~vD~s---~~~~~~a~~----~~~~~~~~~~~~~~~----d~~ 97 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGA----QTVILAKNN---PDAEITSIDIS---PESLEKARE----NTEKNGIKNVKFLQA----NIF 97 (276)
T ss_dssp CTTCEEEETTCTTSH----HHHHHHHHC---TTSEEEEEESC---HHHHHHHHH----HHHHTTCCSEEEEEC----CGG
T ss_pred CCCCeEEEecCCCCH----HHHHHHHhC---CCCEEEEEECC---HHHHHHHHH----HHHHcCCCCcEEEEc----ccc
Confidence 345589999999983 444555542 34699999952 233433333 34445664 444332 244
Q ss_pred cccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEe
Q 047247 261 ELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIV 309 (386)
Q Consensus 261 ~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlv 309 (386)
++. ..++..=+|-+...|||+. ++ +.+|+.+ +-|+|.-++++
T Consensus 98 ~~~-----~~~~~fD~v~~~~~l~~~~-~~-~~~l~~~~~~L~pgG~l~~ 140 (276)
T 3mgg_A 98 SLP-----FEDSSFDHIFVCFVLEHLQ-SP-EEALKSLKKVLKPGGTITV 140 (276)
T ss_dssp GCC-----SCTTCEEEEEEESCGGGCS-CH-HHHHHHHHHHEEEEEEEEE
T ss_pred cCC-----CCCCCeeEEEEechhhhcC-CH-HHHHHHHHHHcCCCcEEEE
Confidence 332 2334444555666788875 33 3566655 56899865555
No 46
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=89.36 E-value=2.1 Score=43.35 Aligned_cols=121 Identities=11% Similarity=0.115 Sum_probs=67.3
Q ss_pred HHHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHH---HHHHHHcCCc-
Q 047247 172 NGAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRM---EKFARLMGVP- 247 (386)
Q Consensus 172 NqaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL---~~fA~~lgip- 247 (386)
-..|++.+.-...=+|+|+|.|.|. +.-.+|.+.+ .-+++||+... ..++-+.+++ .+.++..|+.
T Consensus 162 i~~il~~l~l~~gd~VLDLGCGtG~----l~l~lA~~~g---~~kVvGIDiS~---~~lelAr~n~e~frkr~~~~Gl~~ 231 (438)
T 3uwp_A 162 VAQMIDEIKMTDDDLFVDLGSGVGQ----VVLQVAAATN---CKHHYGVEKAD---IPAKYAETMDREFRKWMKWYGKKH 231 (438)
T ss_dssp HHHHHHHHCCCTTCEEEEESCTTSH----HHHHHHHHCC---CSEEEEEECCH---HHHHHHHHHHHHHHHHHHHHTBCC
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCH----HHHHHHHHCC---CCEEEEEeCCH---HHHHHHHHHHHHHHHHHHHhCCCC
Confidence 3556676664555579999999974 3333443332 23799999532 2222222222 3345667762
Q ss_pred eEEEEeecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHHHhcCCcEEEEe
Q 047247 248 FEFKVITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMFQSLKPKVVTIV 309 (386)
Q Consensus 248 FeF~~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~ir~L~P~vvvlv 309 (386)
-.+..+.. ++.++.... .+..-.+|++|..+ + ..+....+....|.|+|.-.+++
T Consensus 232 ~rVefi~G--D~~~lp~~d-~~~~aDVVf~Nn~~--F--~pdl~~aL~Ei~RvLKPGGrIVs 286 (438)
T 3uwp_A 232 AEYTLERG--DFLSEEWRE-RIANTSVIFVNNFA--F--GPEVDHQLKERFANMKEGGRIVS 286 (438)
T ss_dssp CEEEEEEC--CTTSHHHHH-HHHTCSEEEECCTT--C--CHHHHHHHHHHHTTSCTTCEEEE
T ss_pred CCeEEEEC--cccCCcccc-ccCCccEEEEcccc--c--CchHHHHHHHHHHcCCCCcEEEE
Confidence 23444432 454443221 11233577788654 2 24556667777889999876665
No 47
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=89.27 E-value=3.5 Score=37.77 Aligned_cols=109 Identities=19% Similarity=0.225 Sum_probs=61.7
Q ss_pred HHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc--eEEEE
Q 047247 175 ILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP--FEFKV 252 (386)
Q Consensus 175 ILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip--FeF~~ 252 (386)
+++.+... .-+|+|+|.|.|. +...|+.+ | .++|||+.. ...++.+.++ ++..|++ .+|..
T Consensus 61 ~l~~~~~~-~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~s---~~~~~~a~~~----~~~~~~~~~v~~~~ 123 (285)
T 4htf_A 61 VLAEMGPQ-KLRVLDAGGGEGQ----TAIKMAER--G---HQVILCDLS---AQMIDRAKQA----AEAKGVSDNMQFIH 123 (285)
T ss_dssp HHHHTCSS-CCEEEEETCTTCH----HHHHHHHT--T---CEEEEEESC---HHHHHHHHHH----HHC-CCGGGEEEEE
T ss_pred HHHhcCCC-CCEEEEeCCcchH----HHHHHHHC--C---CEEEEEECC---HHHHHHHHHH----HHhcCCCcceEEEE
Confidence 44444433 5689999999983 55666666 2 489999952 2344443333 3445664 44443
Q ss_pred eecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEee
Q 047247 253 ITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIVE 310 (386)
Q Consensus 253 v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlvE 310 (386)
. +++++.. ..++..=+|-|...|||+. ++. .+|+.+ +-|+|.-++++.
T Consensus 124 ~----d~~~~~~----~~~~~fD~v~~~~~l~~~~-~~~-~~l~~~~~~LkpgG~l~~~ 172 (285)
T 4htf_A 124 C----AAQDVAS----HLETPVDLILFHAVLEWVA-DPR-SVLQTLWSVLRPGGVLSLM 172 (285)
T ss_dssp S----CGGGTGG----GCSSCEEEEEEESCGGGCS-CHH-HHHHHHHHTEEEEEEEEEE
T ss_pred c----CHHHhhh----hcCCCceEEEECchhhccc-CHH-HHHHHHHHHcCCCeEEEEE
Confidence 2 3444431 1223333444566788874 444 455554 668998776664
No 48
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=89.19 E-value=3.1 Score=37.59 Aligned_cols=111 Identities=18% Similarity=0.286 Sum_probs=62.7
Q ss_pred HHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc--eEE
Q 047247 173 GAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP--FEF 250 (386)
Q Consensus 173 qaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip--FeF 250 (386)
..|++.+.-...-+|+|+|.|.|. +...|+.+.+ .++|||+.. ...++.+. +.++..|++ ++|
T Consensus 51 ~~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~~----~~v~gvD~s---~~~~~~a~----~~~~~~~~~~~~~~ 115 (273)
T 3bus_A 51 DEMIALLDVRSGDRVLDVGCGIGK----PAVRLATARD----VRVTGISIS---RPQVNQAN----ARATAAGLANRVTF 115 (273)
T ss_dssp HHHHHHSCCCTTCEEEEESCTTSH----HHHHHHHHSC----CEEEEEESC---HHHHHHHH----HHHHHTTCTTTEEE
T ss_pred HHHHHhcCCCCCCEEEEeCCCCCH----HHHHHHHhcC----CEEEEEeCC---HHHHHHHH----HHHHhcCCCcceEE
Confidence 445566654555689999999875 3344444432 589999852 23343333 334455654 555
Q ss_pred EEeecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEe
Q 047247 251 KVITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIV 309 (386)
Q Consensus 251 ~~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlv 309 (386)
... +++++. ..++..=+|-+...|||+. + ...+|+.+ +-|+|.-.+++
T Consensus 116 ~~~----d~~~~~-----~~~~~fD~v~~~~~l~~~~-~-~~~~l~~~~~~L~pgG~l~i 164 (273)
T 3bus_A 116 SYA----DAMDLP-----FEDASFDAVWALESLHHMP-D-RGRALREMARVLRPGGTVAI 164 (273)
T ss_dssp EEC----CTTSCC-----SCTTCEEEEEEESCTTTSS-C-HHHHHHHHHTTEEEEEEEEE
T ss_pred EEC----ccccCC-----CCCCCccEEEEechhhhCC-C-HHHHHHHHHHHcCCCeEEEE
Confidence 433 344432 2233333445566688874 3 35666665 55799865544
No 49
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=89.11 E-value=1.6 Score=41.62 Aligned_cols=117 Identities=17% Similarity=0.137 Sum_probs=68.8
Q ss_pred HHHhhcCCCc-eeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc--eEE
Q 047247 174 AILEALDGET-KLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP--FEF 250 (386)
Q Consensus 174 aILeA~~g~~-~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip--FeF 250 (386)
.|++.+.-.+ ..+|+|+|.|.|. +...|+.+. |.+++|+++.+. .++.+.++ ++..++. ++|
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~~----~~~~a~~~----~~~~~~~~~v~~ 233 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGT----YLAQVLRRH---PQLTGQIWDLPT----TRDAARKT----IHAHDLGGRVEF 233 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCH----HHHHHHHHC---TTCEEEEEECGG----GHHHHHHH----HHHTTCGGGEEE
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCH----HHHHHHHhC---CCCeEEEEECHH----HHHHHHHH----HHhcCCCCceEE
Confidence 6777776445 7899999999985 455555543 458999998632 34333333 3344553 555
Q ss_pred EEeecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEE-EeeecC
Q 047247 251 KVITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVT-IVEEEA 313 (386)
Q Consensus 251 ~~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvv-lvE~ea 313 (386)
..- ++.+..+ ..++..=+|-|...||++.......+|+.+ +.|+|.-.+ ++|.-.
T Consensus 234 ~~~----d~~~~~~----~~~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 290 (352)
T 3mcz_A 234 FEK----NLLDARN----FEGGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTM 290 (352)
T ss_dssp EEC----CTTCGGG----GTTCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECC
T ss_pred EeC----CcccCcc----cCCCCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 443 2332221 012224445556678988655566788776 558998654 445433
No 50
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=88.71 E-value=3.7 Score=35.79 Aligned_cols=105 Identities=22% Similarity=0.189 Sum_probs=57.4
Q ss_pred eeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCC------ceEEEEeecCC
Q 047247 184 KLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGV------PFEFKVITGLN 257 (386)
Q Consensus 184 ~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgi------pFeF~~v~~~~ 257 (386)
.-.|+|+|.|.|. +...|+.+ + .++|||+.. ...++.+ .+.++..++ .++|...
T Consensus 31 ~~~vLdiG~G~G~----~~~~l~~~--~---~~v~~vD~s---~~~~~~a----~~~~~~~~~~~~~~~~~~~~~~---- 90 (235)
T 3sm3_A 31 DDEILDIGCGSGK----ISLELASK--G---YSVTGIDIN---SEAIRLA----ETAARSPGLNQKTGGKAEFKVE---- 90 (235)
T ss_dssp TCEEEEETCTTSH----HHHHHHHT--T---CEEEEEESC---HHHHHHH----HHHTTCCSCCSSSSCEEEEEEC----
T ss_pred CCeEEEECCCCCH----HHHHHHhC--C---CeEEEEECC---HHHHHHH----HHHHHhcCCccccCcceEEEEe----
Confidence 3479999999984 44555555 2 489999952 2233222 233344555 2344332
Q ss_pred ccccccccccccCCCceEEEeeccccccccc-chHHHHHHHH-HhcCCcEEEEe-eecC
Q 047247 258 RLVELTKGTLGVKEDEAVAVNCIGALRRVAV-EERGAVIQMF-QSLKPKVVTIV-EEEA 313 (386)
Q Consensus 258 ~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~-~~r~~vL~~i-r~L~P~vvvlv-E~ea 313 (386)
+++++. ..++..=+|-|...||++.. ..+..+|+.+ +.|+|.-++++ +...
T Consensus 91 d~~~~~-----~~~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 91 NASSLS-----FHDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQ 144 (235)
T ss_dssp CTTSCC-----SCTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred cccccC-----CCCCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCc
Confidence 233332 22333334445567888863 3344677766 55899865544 4433
No 51
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=88.45 E-value=0.89 Score=44.02 Aligned_cols=119 Identities=16% Similarity=0.136 Sum_probs=68.9
Q ss_pred HHHHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEE
Q 047247 171 SNGAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEF 250 (386)
Q Consensus 171 ANqaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF 250 (386)
....|++++.-...-+|||+|.|.|. ++.+|+.+. |.+|+|..+.|. .++.+.+++. ....=..+|
T Consensus 167 ~~~~~~~~~~~~~~~~v~DvGgG~G~----~~~~l~~~~---p~~~~~~~dlp~----v~~~a~~~~~---~~~~~rv~~ 232 (353)
T 4a6d_A 167 NGRSVLTAFDLSVFPLMCDLGGGAGA----LAKECMSLY---PGCKITVFDIPE----VVWTAKQHFS---FQEEEQIDF 232 (353)
T ss_dssp HHHHHHHSSCGGGCSEEEEETCTTSH----HHHHHHHHC---SSCEEEEEECHH----HHHHHHHHSC---C--CCSEEE
T ss_pred HHHHHHHhcCcccCCeEEeeCCCCCH----HHHHHHHhC---CCceeEeccCHH----HHHHHHHhhh---hcccCceee
Confidence 34678888765555689999999984 566666664 678999888642 3444333321 111112444
Q ss_pred EEeecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcE-EEEeeecCC
Q 047247 251 KVITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKV-VTIVEEEAD 314 (386)
Q Consensus 251 ~~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~v-vvlvE~ea~ 314 (386)
.+- ++- + . .....+++ -+...||+..+.....+|+.+ +.|+|.- ++++|.-.+
T Consensus 233 ~~g----D~~--~-~--~~~~~D~~--~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~ 287 (353)
T 4a6d_A 233 QEG----DFF--K-D--PLPEADLY--ILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLD 287 (353)
T ss_dssp EES----CTT--T-S--CCCCCSEE--EEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCC
T ss_pred ecC----ccc--c-C--CCCCceEE--EeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeC
Confidence 432 121 1 1 12223444 344558988765556778877 5689975 555665443
No 52
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=88.40 E-value=0.94 Score=41.28 Aligned_cols=101 Identities=10% Similarity=0.063 Sum_probs=62.3
Q ss_pred EEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEeecCCcccccccc
Q 047247 186 HIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVITGLNRLVELTKG 265 (386)
Q Consensus 186 HIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v~~~~~~e~l~~~ 265 (386)
+|+|+|.|.| +|--.++... |..+++|++- +...++-+. +.|+..|+...+.... ..+.
T Consensus 52 ~VLDlGCG~G----plAl~l~~~~---p~a~~~A~Di---~~~~leiar----~~~~~~g~~~~v~~~d----~~~~--- 110 (200)
T 3fzg_A 52 SILDFGCGFN----PLALYQWNEN---EKIIYHAYDI---DRAEIAFLS----SIIGKLKTTIKYRFLN----KESD--- 110 (200)
T ss_dssp EEEEETCTTH----HHHHHHHCSS---CCCEEEEECS---CHHHHHHHH----HHHHHSCCSSEEEEEC----CHHH---
T ss_pred eEEEecCCCC----HHHHHHHhcC---CCCEEEEEeC---CHHHHHHHH----HHHHhcCCCccEEEec----cccc---
Confidence 7899998875 4555555543 4569999995 223343333 4467778875554421 2111
Q ss_pred ccccCCCceEEEeecccccccccchHHHHHHHHHhcCCcEEEEeee
Q 047247 266 TLGVKEDEAVAVNCIGALRRVAVEERGAVIQMFQSLKPKVVTIVEE 311 (386)
Q Consensus 266 ~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~ir~L~P~vvvlvE~ 311 (386)
..++..=+|=..-.||+| ...+....+.++.|+|..++++=+
T Consensus 111 ---~~~~~~DvVLa~k~LHlL-~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 111 ---VYKGTYDVVFLLKMLPVL-KQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp ---HTTSEEEEEEEETCHHHH-HHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred ---CCCCCcChhhHhhHHHhh-hhhHHHHHHHHHHhCCCCEEEEeC
Confidence 122222233333448888 677777889999999999998855
No 53
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=88.38 E-value=2.8 Score=36.11 Aligned_cols=102 Identities=13% Similarity=0.119 Sum_probs=56.1
Q ss_pred eEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEeecCCccccccc
Q 047247 185 LHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVITGLNRLVELTK 264 (386)
Q Consensus 185 VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v~~~~~~e~l~~ 264 (386)
-+|+|+|.|.|.-...++ +. ++ .++|||+.. ...++.+.+++ +..+..++|... +++++.
T Consensus 25 ~~vLDiGcG~G~~~~~~~---~~-~~----~~v~~vD~s---~~~~~~a~~~~----~~~~~~~~~~~~----d~~~~~- 84 (209)
T 2p8j_A 25 KTVLDCGAGGDLPPLSIF---VE-DG----YKTYGIEIS---DLQLKKAENFS----RENNFKLNISKG----DIRKLP- 84 (209)
T ss_dssp SEEEEESCCSSSCTHHHH---HH-TT----CEEEEEECC---HHHHHHHHHHH----HHHTCCCCEEEC----CTTSCC-
T ss_pred CEEEEECCCCCHHHHHHH---Hh-CC----CEEEEEECC---HHHHHHHHHHH----HhcCCceEEEEC----chhhCC-
Confidence 479999999886544443 22 22 489999952 33444444433 333444444332 244332
Q ss_pred cccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEee
Q 047247 265 GTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIVE 310 (386)
Q Consensus 265 ~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlvE 310 (386)
..++..=+|-|...+||+.......+|+.+ +.|+|.-++++.
T Consensus 85 ----~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 127 (209)
T 2p8j_A 85 ----FKDESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACIN 127 (209)
T ss_dssp ----SCTTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ----CCCCceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 223333233455668888544455666655 668998666553
No 54
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=87.77 E-value=2.7 Score=40.64 Aligned_cols=116 Identities=16% Similarity=0.176 Sum_probs=68.2
Q ss_pred HHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCC--ceEE
Q 047247 173 GAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGV--PFEF 250 (386)
Q Consensus 173 qaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgi--pFeF 250 (386)
..|++.+.-.+...|+|+|.|.|. +...|+.+. |.+++|+++.+ ..++.+.+++ ...|+ ..+|
T Consensus 192 ~~l~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~----~~~~~a~~~~----~~~~l~~~v~~ 256 (369)
T 3gwz_A 192 GQVAAAYDFSGAATAVDIGGGRGS----LMAAVLDAF---PGLRGTLLERP----PVAEEARELL----TGRGLADRCEI 256 (369)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEECH----HHHHHHHHHH----HHTTCTTTEEE
T ss_pred HHHHHhCCCccCcEEEEeCCCccH----HHHHHHHHC---CCCeEEEEcCH----HHHHHHHHhh----hhcCcCCceEE
Confidence 567777766667899999999995 445555542 56899999852 2344444443 33454 3566
Q ss_pred EEeecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHHH-hcCCcEEE-EeeecCC
Q 047247 251 KVITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMFQ-SLKPKVVT-IVEEEAD 314 (386)
Q Consensus 251 ~~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~ir-~L~P~vvv-lvE~ea~ 314 (386)
..-. +.+ .+.. .-++++ |...||++.......+|+.++ .|+|.-.+ ++|.-.+
T Consensus 257 ~~~d----~~~----~~p~-~~D~v~--~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~ 311 (369)
T 3gwz_A 257 LPGD----FFE----TIPD-GADVYL--IKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLID 311 (369)
T ss_dssp EECC----TTT----CCCS-SCSEEE--EESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCC
T ss_pred eccC----CCC----CCCC-CceEEE--hhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 5542 221 1111 224443 444578876555557888775 57997544 4455443
No 55
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=87.56 E-value=3.8 Score=38.30 Aligned_cols=110 Identities=10% Similarity=0.001 Sum_probs=63.5
Q ss_pred HHHHhhcC-CCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc--eE
Q 047247 173 GAILEALD-GETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP--FE 249 (386)
Q Consensus 173 qaILeA~~-g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip--Fe 249 (386)
+.|++.+. -...-+|+|+|.|.|. +...|+.+.+ .++|||+.. ...++.+. +.++..|++ .+
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~G~----~~~~la~~~~----~~v~gvD~s---~~~~~~a~----~~~~~~~~~~~v~ 170 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGRGG----SMVMAHRRFG----SRVEGVTLS---AAQADFGN----RRARELRIDDHVR 170 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTTSH----HHHHHHHHHC----CEEEEEESC---HHHHHHHH----HHHHHTTCTTTEE
T ss_pred HHHHHHhccCCCCCEEEEecCCCCH----HHHHHHHHcC----CEEEEEeCC---HHHHHHHH----HHHHHcCCCCceE
Confidence 45777776 3445689999999874 3344554422 589999952 23443333 344556765 55
Q ss_pred EEEeecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEe
Q 047247 250 FKVITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIV 309 (386)
Q Consensus 250 F~~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlv 309 (386)
|..- +++++. ..++..=+|-|...+||+. ...+|+.+ +.|+|.-.+++
T Consensus 171 ~~~~----d~~~~~-----~~~~~fD~V~~~~~l~~~~---~~~~l~~~~~~LkpgG~l~~ 219 (312)
T 3vc1_A 171 SRVC----NMLDTP-----FDKGAVTASWNNESTMYVD---LHDLFSEHSRFLKVGGRYVT 219 (312)
T ss_dssp EEEC----CTTSCC-----CCTTCEEEEEEESCGGGSC---HHHHHHHHHHHEEEEEEEEE
T ss_pred EEEC----ChhcCC-----CCCCCEeEEEECCchhhCC---HHHHHHHHHHHcCCCcEEEE
Confidence 5443 344432 2233333444556688872 55566655 66899865544
No 56
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=87.36 E-value=8.3 Score=35.89 Aligned_cols=112 Identities=13% Similarity=0.011 Sum_probs=58.3
Q ss_pred ceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHH----cCCceEEEEeecCCc
Q 047247 183 TKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARL----MGVPFEFKVITGLNR 258 (386)
Q Consensus 183 ~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~----lgipFeF~~v~~~~~ 258 (386)
+.-+|+|+|.|.|.-- ..|+.++ .-++|||+. +...++.+.+++...... ....++|... +
T Consensus 34 ~~~~VLDlGcG~G~~~----~~l~~~~----~~~v~gvD~---s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~----D 98 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDL----LKWKKGR----INKLVCTDI---ADVSVKQCQQRYEDMKNRRDSEYIFSAEFITA----D 98 (313)
T ss_dssp -CCEEEEETCTTTTTH----HHHHHTT----CSEEEEEES---CHHHHHHHHHHHHHHHSSSCC-CCCEEEEEEC----C
T ss_pred CCCEEEEECCCCcHHH----HHHHhcC----CCEEEEEeC---CHHHHHHHHHHHHHhhhcccccccceEEEEEe----c
Confidence 4568999999998733 3344432 358999995 233555555554432210 1113344332 3
Q ss_pred ccccccc-ccccCCCceEEEeeccccccccc--chHHHHHHHH-HhcCCcEEEEe
Q 047247 259 LVELTKG-TLGVKEDEAVAVNCIGALRRVAV--EERGAVIQMF-QSLKPKVVTIV 309 (386)
Q Consensus 259 ~e~l~~~-~L~~~~~EaLaVN~~~~Lh~l~~--~~r~~vL~~i-r~L~P~vvvlv 309 (386)
++++... .+.-.++..=+|-|.+.||++.. .....+|+.+ +.|+|.-++++
T Consensus 99 ~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~ 153 (313)
T 3bgv_A 99 SSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIG 153 (313)
T ss_dssp TTTSCSTTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred ccccchhhhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEE
Confidence 4443311 12111223334455667888732 2244667666 56899865554
No 57
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=87.30 E-value=4.5 Score=35.22 Aligned_cols=101 Identities=15% Similarity=0.030 Sum_probs=54.2
Q ss_pred eeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEeecCCcccccc
Q 047247 184 KLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVITGLNRLVELT 263 (386)
Q Consensus 184 ~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v~~~~~~e~l~ 263 (386)
.-.|+|+|.|.| .+...|+.+ ++ ++|||+.. ...++.+.+++ +..+...+|... ++.++.
T Consensus 39 ~~~vLDlG~G~G----~~~~~l~~~--~~---~v~~vD~s---~~~~~~a~~~~----~~~~~~~~~~~~----d~~~~~ 98 (227)
T 1ve3_A 39 RGKVLDLACGVG----GFSFLLEDY--GF---EVVGVDIS---EDMIRKAREYA----KSRESNVEFIVG----DARKLS 98 (227)
T ss_dssp CCEEEEETCTTS----HHHHHHHHT--TC---EEEEEESC---HHHHHHHHHHH----HHTTCCCEEEEC----CTTSCC
T ss_pred CCeEEEEeccCC----HHHHHHHHc--CC---EEEEEECC---HHHHHHHHHHH----HhcCCCceEEEC----chhcCC
Confidence 457999999998 344556665 33 99999852 23444443333 333444555433 343332
Q ss_pred ccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEe
Q 047247 264 KGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIV 309 (386)
Q Consensus 264 ~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlv 309 (386)
+.-..=+.|+.|..+.+++. .....+|+.+ +.|+|.-.+++
T Consensus 99 ---~~~~~~D~v~~~~~~~~~~~--~~~~~~l~~~~~~L~~gG~l~~ 140 (227)
T 1ve3_A 99 ---FEDKTFDYVIFIDSIVHFEP--LELNQVFKEVRRVLKPSGKFIM 140 (227)
T ss_dssp ---SCTTCEEEEEEESCGGGCCH--HHHHHHHHHHHHHEEEEEEEEE
T ss_pred ---CCCCcEEEEEEcCchHhCCH--HHHHHHHHHHHHHcCCCcEEEE
Confidence 11112245666655445543 2234566655 66899865554
No 58
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=86.95 E-value=1.5 Score=38.85 Aligned_cols=108 Identities=9% Similarity=0.030 Sum_probs=55.8
Q ss_pred eEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc--eEEEEeecCCccccc
Q 047247 185 LHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP--FEFKVITGLNRLVEL 262 (386)
Q Consensus 185 VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip--FeF~~v~~~~~~e~l 262 (386)
-+|+|+|.+.|.- ...||.+- ++.-+||+|+.. ...++.+. +.++..|+. ++|..- +..+.
T Consensus 60 ~~vLdiG~G~G~~----~~~la~~~--~~~~~v~~vD~~---~~~~~~a~----~~~~~~~~~~~v~~~~~----d~~~~ 122 (221)
T 3u81_A 60 SLVLELGAYCGYS----AVRMARLL--QPGARLLTMEIN---PDCAAITQ----QMLNFAGLQDKVTILNG----ASQDL 122 (221)
T ss_dssp SEEEEECCTTSHH----HHHHHTTS--CTTCEEEEEESC---HHHHHHHH----HHHHHHTCGGGEEEEES----CHHHH
T ss_pred CEEEEECCCCCHH----HHHHHHhC--CCCCEEEEEeCC---hHHHHHHH----HHHHHcCCCCceEEEEC----CHHHH
Confidence 4799999998853 22344431 234699999952 23343333 334455664 555432 22221
Q ss_pred ccc---ccccCCCceEEEeecccccccccchHHHHHHHHHhcCCcEEEEeeecC
Q 047247 263 TKG---TLGVKEDEAVAVNCIGALRRVAVEERGAVIQMFQSLKPKVVTIVEEEA 313 (386)
Q Consensus 263 ~~~---~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~ir~L~P~vvvlvE~ea 313 (386)
-+. ......=+.|+++.. .++. .+...++..++-|+|.-+++++.-.
T Consensus 123 l~~~~~~~~~~~fD~V~~d~~--~~~~--~~~~~~~~~~~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 123 IPQLKKKYDVDTLDMVFLDHW--KDRY--LPDTLLLEKCGLLRKGTVLLADNVI 172 (221)
T ss_dssp GGGTTTTSCCCCCSEEEECSC--GGGH--HHHHHHHHHTTCCCTTCEEEESCCC
T ss_pred HHHHHHhcCCCceEEEEEcCC--cccc--hHHHHHHHhccccCCCeEEEEeCCC
Confidence 111 000112246665543 2222 1223456656889999998886443
No 59
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=86.74 E-value=6.5 Score=34.98 Aligned_cols=102 Identities=9% Similarity=0.058 Sum_probs=55.8
Q ss_pred CceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEeecCCcccc
Q 047247 182 ETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVITGLNRLVE 261 (386)
Q Consensus 182 ~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v~~~~~~e~ 261 (386)
.+.-.|+|+|.|.|.-- ..|+.+ + .++|||+.. ...++.+.+++ +...-.++|... ++++
T Consensus 38 ~~~~~vLDiG~G~G~~~----~~l~~~--~---~~v~~vD~s---~~~~~~a~~~~----~~~~~~~~~~~~----d~~~ 97 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIA----LPLIAR--G---YRYIALDAD---AAMLEVFRQKI----AGVDRKVQVVQA----DARA 97 (263)
T ss_dssp SSCCEEEEETCTTSTTH----HHHHTT--T---CEEEEEESC---HHHHHHHHHHT----TTSCTTEEEEES----CTTS
T ss_pred CCCCEEEEeCCcCCHHH----HHHHHC--C---CEEEEEECC---HHHHHHHHHHh----hccCCceEEEEc----cccc
Confidence 34458999999998643 344444 2 489999952 23444443333 112233555432 3444
Q ss_pred ccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEee
Q 047247 262 LTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIVE 310 (386)
Q Consensus 262 l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlvE 310 (386)
+. ..++..=+|-|...+|++. + ...+|+.+ +-|+|.-.+++.
T Consensus 98 ~~-----~~~~~fD~v~~~~~l~~~~-~-~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 98 IP-----LPDESVHGVIVVHLWHLVP-D-WPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp CC-----SCTTCEEEEEEESCGGGCT-T-HHHHHHHHHHHEEEEEEEEEE
T ss_pred CC-----CCCCCeeEEEECCchhhcC-C-HHHHHHHHHHHCCCCcEEEEE
Confidence 32 2233333444556688875 3 34455554 668998666554
No 60
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=86.41 E-value=3.8 Score=39.01 Aligned_cols=114 Identities=19% Similarity=0.205 Sum_probs=66.0
Q ss_pred HHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc--eEE
Q 047247 173 GAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP--FEF 250 (386)
Q Consensus 173 qaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip--FeF 250 (386)
..|++.+.-.+..+|+|+|.|.|. +...|+.+. |.+++|+++.+. .++.+.+++ +..|++ ++|
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~----~~~~l~~~~---~~~~~~~~D~~~----~~~~a~~~~----~~~~~~~~v~~ 237 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGG----FAAAIARRA---PHVSATVLEMAG----TVDTARSYL----KDEGLSDRVDV 237 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEECTT----HHHHHHHHH----HHTTCTTTEEE
T ss_pred HHHHHhCCCccCcEEEEeCCcCcH----HHHHHHHhC---CCCEEEEecCHH----HHHHHHHHH----HhcCCCCceEE
Confidence 456777765566799999999984 344444442 468999998521 344444433 344553 555
Q ss_pred EEeecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcE-EEEeeec
Q 047247 251 KVITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKV-VTIVEEE 312 (386)
Q Consensus 251 ~~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~v-vvlvE~e 312 (386)
..- ++.+ .+ ++..=+|-+...||++.......+|+.+ +.|+|.- ++++|..
T Consensus 238 ~~~----d~~~----~~---~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 238 VEG----DFFE----PL---PRKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp EEC----CTTS----CC---SSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EeC----CCCC----CC---CCCccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 543 2322 11 1113344455568887644445677766 5579986 4445654
No 61
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=86.32 E-value=2.8 Score=36.27 Aligned_cols=43 Identities=30% Similarity=0.299 Sum_probs=31.5
Q ss_pred HHHHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEecc
Q 047247 171 SNGAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVT 222 (386)
Q Consensus 171 ANqaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~ 222 (386)
....|++.+...+.-.|+|+|.|.| .+...|+.+ | .++|||+.
T Consensus 40 ~~~~~~~~~~~~~~~~vLdiG~G~G----~~~~~l~~~--~---~~v~~vD~ 82 (227)
T 3e8s_A 40 TDQAILLAILGRQPERVLDLGCGEG----WLLRALADR--G---IEAVGVDG 82 (227)
T ss_dssp HHHHHHHHHHHTCCSEEEEETCTTC----HHHHHHHTT--T---CEEEEEES
T ss_pred ccHHHHHHhhcCCCCEEEEeCCCCC----HHHHHHHHC--C---CEEEEEcC
Confidence 4456777776555578999999998 455667766 2 38999995
No 62
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=86.16 E-value=3.5 Score=36.27 Aligned_cols=102 Identities=13% Similarity=0.103 Sum_probs=57.8
Q ss_pred ceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEeecCCccccc
Q 047247 183 TKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVITGLNRLVEL 262 (386)
Q Consensus 183 ~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v~~~~~~e~l 262 (386)
+.-+|+|+|.|.|.- ...|+.+ + .++|||+.. ...++.+.+++ ...|+.++|... ++.++
T Consensus 37 ~~~~vLdiG~G~G~~----~~~l~~~--~---~~~~~~D~s---~~~~~~a~~~~----~~~~~~~~~~~~----d~~~~ 96 (246)
T 1y8c_A 37 VFDDYLDLACGTGNL----TENLCPK--F---KNTWAVDLS---QEMLSEAENKF----RSQGLKPRLACQ----DISNL 96 (246)
T ss_dssp CTTEEEEETCTTSTT----HHHHGGG--S---SEEEEECSC---HHHHHHHHHHH----HHTTCCCEEECC----CGGGC
T ss_pred CCCeEEEeCCCCCHH----HHHHHHC--C---CcEEEEECC---HHHHHHHHHHH----hhcCCCeEEEec----ccccC
Confidence 455899999999873 3445554 2 489999852 23444444443 334544444332 34433
Q ss_pred cccccccCCCceEEEeecc-ccccccc-chHHHHHHHH-HhcCCcEEEEee
Q 047247 263 TKGTLGVKEDEAVAVNCIG-ALRRVAV-EERGAVIQMF-QSLKPKVVTIVE 310 (386)
Q Consensus 263 ~~~~L~~~~~EaLaVN~~~-~Lh~l~~-~~r~~vL~~i-r~L~P~vvvlvE 310 (386)
.. . +..=+|-|.. .|||+.. .....+|+.+ +.|+|.-+++++
T Consensus 97 ~~-----~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 97 NI-----N-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp CC-----S-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred Cc-----c-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 21 1 2222333555 7888852 3445666665 557998777664
No 63
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=85.63 E-value=1.8 Score=40.50 Aligned_cols=55 Identities=13% Similarity=0.149 Sum_probs=31.9
Q ss_pred HHhhcCCC--ceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHH
Q 047247 175 ILEALDGE--TKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEK 239 (386)
Q Consensus 175 ILeA~~g~--~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~ 239 (386)
+++.+... +.-.|+|+|.|.| .+...|+.+-+ ..+||||+.. ...++.+.+++..
T Consensus 36 ~l~~l~~~~~~~~~VLDiGCG~G----~~~~~la~~~~---~~~v~gvDis---~~~i~~A~~~~~~ 92 (292)
T 3g07_A 36 RLRVLKPEWFRGRDVLDLGCNVG----HLTLSIACKWG---PSRMVGLDID---SRLIHSARQNIRH 92 (292)
T ss_dssp GGGTSCGGGTTTSEEEEESCTTC----HHHHHHHHHTC---CSEEEEEESC---HHHHHHHHHTC--
T ss_pred HHHhhhhhhcCCCcEEEeCCCCC----HHHHHHHHHcC---CCEEEEECCC---HHHHHHHHHHHHh
Confidence 44444332 3457999999998 34445555532 2599999962 3345555555443
No 64
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=85.59 E-value=5.2 Score=33.28 Aligned_cols=101 Identities=14% Similarity=0.056 Sum_probs=55.0
Q ss_pred HHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEee
Q 047247 175 ILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVIT 254 (386)
Q Consensus 175 ILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v~ 254 (386)
+++.+.-.+.-.|+|+|.|.|. +...|+.+. . ++|||+.. ...++.+.++ .-..+|. .
T Consensus 9 ~~~~~~~~~~~~vLDiG~G~G~----~~~~l~~~~----~-~v~~vD~s---~~~~~~a~~~--------~~~v~~~--~ 66 (170)
T 3i9f_A 9 YLPNIFEGKKGVIVDYGCGNGF----YCKYLLEFA----T-KLYCIDIN---VIALKEVKEK--------FDSVITL--S 66 (170)
T ss_dssp THHHHHSSCCEEEEEETCTTCT----THHHHHTTE----E-EEEEECSC---HHHHHHHHHH--------CTTSEEE--S
T ss_pred HHHhcCcCCCCeEEEECCCCCH----HHHHHHhhc----C-eEEEEeCC---HHHHHHHHHh--------CCCcEEE--e
Confidence 4444544566789999999986 344555543 2 99999952 2334333333 1122222 1
Q ss_pred cCCccccccccccccCCCceEEEeecccccccccchHHHHHHH-HHhcCCcEEEEe
Q 047247 255 GLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQM-FQSLKPKVVTIV 309 (386)
Q Consensus 255 ~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~-ir~L~P~vvvlv 309 (386)
. + +...++..=+|-|...+||+. ++ ..+|+. .+.|+|.-.+++
T Consensus 67 ~--d--------~~~~~~~~D~v~~~~~l~~~~-~~-~~~l~~~~~~L~pgG~l~~ 110 (170)
T 3i9f_A 67 D--P--------KEIPDNSVDFILFANSFHDMD-DK-QHVISEVKRILKDDGRVII 110 (170)
T ss_dssp S--G--------GGSCTTCEEEEEEESCSTTCS-CH-HHHHHHHHHHEEEEEEEEE
T ss_pred C--C--------CCCCCCceEEEEEccchhccc-CH-HHHHHHHHHhcCCCCEEEE
Confidence 1 1 223333333444556688874 44 455554 466899755544
No 65
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=85.48 E-value=6.3 Score=38.57 Aligned_cols=119 Identities=13% Similarity=0.022 Sum_probs=65.6
Q ss_pred HHHHHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCC---
Q 047247 170 ASNGAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGV--- 246 (386)
Q Consensus 170 tANqaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgi--- 246 (386)
.....+++.+.....-+|+|+|.|.|. +...|+.+. |..++|||+. +...++.+.+++ +..|+
T Consensus 209 ~~~~~ll~~l~~~~~~~VLDlGcG~G~----~s~~la~~~---p~~~V~gvD~---s~~al~~Ar~n~----~~ngl~~~ 274 (375)
T 4dcm_A 209 IGARFFMQHLPENLEGEIVDLGCGNGV----IGLTLLDKN---PQAKVVFVDE---SPMAVASSRLNV----ETNMPEAL 274 (375)
T ss_dssp HHHHHHHHTCCCSCCSEEEEETCTTCH----HHHHHHHHC---TTCEEEEEES---CHHHHHHHHHHH----HHHCGGGG
T ss_pred HHHHHHHHhCcccCCCeEEEEeCcchH----HHHHHHHHC---CCCEEEEEEC---cHHHHHHHHHHH----HHcCCCcC
Confidence 345577888876666789999999984 444455542 3479999995 233454444443 33444
Q ss_pred -ceEEEEeecCCccccccccccccCCCceEEEeecccccc-cccchHHHHHHHH-HhcCCcEEEEee
Q 047247 247 -PFEFKVITGLNRLVELTKGTLGVKEDEAVAVNCIGALRR-VAVEERGAVIQMF-QSLKPKVVTIVE 310 (386)
Q Consensus 247 -pFeF~~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~-l~~~~r~~vL~~i-r~L~P~vvvlvE 310 (386)
.++|..-. +.+. +.-..=+.|+.|-.|.-.. +.......+++.+ +.|+|.-.+++.
T Consensus 275 ~~v~~~~~D----~~~~----~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv 333 (375)
T 4dcm_A 275 DRCEFMINN----ALSG----VEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIV 333 (375)
T ss_dssp GGEEEEECS----TTTT----CCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ceEEEEech----hhcc----CCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 35555432 2221 1111125677776642211 2233344566666 458999777664
No 66
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=85.39 E-value=0.76 Score=40.45 Aligned_cols=112 Identities=13% Similarity=0.062 Sum_probs=58.6
Q ss_pred cCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc-eEEEEeecCC
Q 047247 179 LDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP-FEFKVITGLN 257 (386)
Q Consensus 179 ~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip-FeF~~v~~~~ 257 (386)
+.....-+|+|+|.|.|. +...|+.+. |..++|||+... ..++.+.++..+-++..+++ ++|...
T Consensus 23 l~~~~~~~vLDiGcG~G~----~~~~la~~~---p~~~v~gvD~s~---~~l~~~~~~a~~~~~~~~~~~v~~~~~---- 88 (218)
T 3mq2_A 23 LRSQYDDVVLDVGTGDGK----HPYKVARQN---PSRLVVALDADK---SRMEKISAKAAAKPAKGGLPNLLYLWA---- 88 (218)
T ss_dssp HHTTSSEEEEEESCTTCH----HHHHHHHHC---TTEEEEEEESCG---GGGHHHHHHHTSCGGGTCCTTEEEEEC----
T ss_pred hhccCCCEEEEecCCCCH----HHHHHHHHC---CCCEEEEEECCH---HHHHHHHHHHHHhhhhcCCCceEEEec----
Confidence 334456689999999984 333444442 457999999632 23433333333333345653 555432
Q ss_pred ccccccccccccCCCceEEEeecc-ccc--ccccchHHHHHHHH-HhcCCcEEEEee
Q 047247 258 RLVELTKGTLGVKEDEAVAVNCIG-ALR--RVAVEERGAVIQMF-QSLKPKVVTIVE 310 (386)
Q Consensus 258 ~~e~l~~~~L~~~~~EaLaVN~~~-~Lh--~l~~~~r~~vL~~i-r~L~P~vvvlvE 310 (386)
+++++... -.. +.+.+...+ .+| |+ .++. .+|+.+ +-|+|.-.+++.
T Consensus 89 d~~~l~~~---~~~-d~v~~~~~~~~~~~~~~-~~~~-~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 89 TAERLPPL---SGV-GELHVLMPWGSLLRGVL-GSSP-EMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp CSTTCCSC---CCE-EEEEEESCCHHHHHHHH-TSSS-HHHHHHHHTEEEEEEEEEE
T ss_pred chhhCCCC---CCC-CEEEEEccchhhhhhhh-ccHH-HHHHHHHHHcCCCcEEEEE
Confidence 35544321 111 333333332 232 33 3443 455554 678999877764
No 67
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=85.32 E-value=2.9 Score=39.38 Aligned_cols=115 Identities=8% Similarity=0.071 Sum_probs=64.4
Q ss_pred HHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEE
Q 047247 173 GAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKV 252 (386)
Q Consensus 173 qaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~ 252 (386)
..|++.+.-.. ..|+|+|.|.|. +...|+.+. |.+++|+++.+. .++.+.+++.+.. +.-.++|..
T Consensus 158 ~~~~~~~~~~~-~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~~----~~~~a~~~~~~~~--~~~~v~~~~ 223 (334)
T 2ip2_A 158 HEIPRLLDFRG-RSFVDVGGGSGE----LTKAILQAE---PSARGVMLDREG----SLGVARDNLSSLL--AGERVSLVG 223 (334)
T ss_dssp HHHHHHSCCTT-CEEEEETCTTCH----HHHHHHHHC---TTCEEEEEECTT----CTHHHHHHTHHHH--HTTSEEEEE
T ss_pred HHHHHhCCCCC-CEEEEeCCCchH----HHHHHHHHC---CCCEEEEeCcHH----HHHHHHHHHhhcC--CCCcEEEec
Confidence 56777765344 899999999984 444555543 457999999732 2333444433221 112345544
Q ss_pred eecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEE-Eeeec
Q 047247 253 ITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVT-IVEEE 312 (386)
Q Consensus 253 v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvv-lvE~e 312 (386)
- ++.+ + +. ..-++++ +...||++.......+|+.+ +.|+|.-.+ ++|..
T Consensus 224 ~----d~~~--~--~~-~~~D~v~--~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 274 (334)
T 2ip2_A 224 G----DMLQ--E--VP-SNGDIYL--LSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERT 274 (334)
T ss_dssp S----CTTT--C--CC-SSCSEEE--EESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred C----CCCC--C--CC-CCCCEEE--EchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 3 2322 1 11 1124444 45568887655555777776 557997544 44543
No 68
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=85.14 E-value=4.5 Score=35.42 Aligned_cols=94 Identities=9% Similarity=0.082 Sum_probs=52.8
Q ss_pred eEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEeecCCccccccc
Q 047247 185 LHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVITGLNRLVELTK 264 (386)
Q Consensus 185 VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v~~~~~~e~l~~ 264 (386)
-+|+|+|.|.|. +...|+.+ ++ ++|||+.. ...++.+.+++.. .++|... +++++.
T Consensus 44 ~~vLDiGcG~G~----~~~~l~~~--~~---~v~gvD~s---~~~~~~a~~~~~~-------~v~~~~~----d~~~~~- 99 (250)
T 2p7i_A 44 GNLLELGSFKGD----FTSRLQEH--FN---DITCVEAS---EEAISHAQGRLKD-------GITYIHS----RFEDAQ- 99 (250)
T ss_dssp SCEEEESCTTSH----HHHHHTTT--CS---CEEEEESC---HHHHHHHHHHSCS-------CEEEEES----CGGGCC-
T ss_pred CcEEEECCCCCH----HHHHHHHh--CC---cEEEEeCC---HHHHHHHHHhhhC-------CeEEEEc----cHHHcC-
Confidence 369999999874 45566655 33 79999852 2234333322211 3444332 344441
Q ss_pred cccccCCCceEEEeecccccccccchHHHHHHHHH--hcCCcEEEEe
Q 047247 265 GTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMFQ--SLKPKVVTIV 309 (386)
Q Consensus 265 ~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~ir--~L~P~vvvlv 309 (386)
.++..=+|-|...|||+. ++ ..+|+.++ -|+|.-.+++
T Consensus 100 -----~~~~fD~v~~~~~l~~~~-~~-~~~l~~~~~~~LkpgG~l~i 139 (250)
T 2p7i_A 100 -----LPRRYDNIVLTHVLEHID-DP-VALLKRINDDWLAEGGRLFL 139 (250)
T ss_dssp -----CSSCEEEEEEESCGGGCS-SH-HHHHHHHHHTTEEEEEEEEE
T ss_pred -----cCCcccEEEEhhHHHhhc-CH-HHHHHHHHHHhcCCCCEEEE
Confidence 223333445566789885 33 56777665 6799755544
No 69
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=85.01 E-value=5.6 Score=35.00 Aligned_cols=99 Identities=16% Similarity=0.119 Sum_probs=55.1
Q ss_pred eeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEeecCCcccccc
Q 047247 184 KLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVITGLNRLVELT 263 (386)
Q Consensus 184 ~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v~~~~~~e~l~ 263 (386)
.-.|+|+|.|.|. +...|+.+ | .++|||+.. ...++.+.++. .+..++|... +++++.
T Consensus 54 ~~~vLDiG~G~G~----~~~~l~~~--~---~~v~~vD~s---~~~~~~a~~~~------~~~~~~~~~~----d~~~~~ 111 (242)
T 3l8d_A 54 EAEVLDVGCGDGY----GTYKLSRT--G---YKAVGVDIS---EVMIQKGKERG------EGPDLSFIKG----DLSSLP 111 (242)
T ss_dssp TCEEEEETCTTSH----HHHHHHHT--T---CEEEEEESC---HHHHHHHHTTT------CBTTEEEEEC----BTTBCS
T ss_pred CCeEEEEcCCCCH----HHHHHHHc--C---CeEEEEECC---HHHHHHHHhhc------ccCCceEEEc----chhcCC
Confidence 3489999999984 45566665 2 489999852 22333322221 1233444433 244332
Q ss_pred ccccccCCCceEEEeecccccccccchHHHHHHHHHhcCCcEEEEee
Q 047247 264 KGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMFQSLKPKVVTIVE 310 (386)
Q Consensus 264 ~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~ir~L~P~vvvlvE 310 (386)
..++..=+|-|...|||+. ++...+-...+.|+|.-++++.
T Consensus 112 -----~~~~~fD~v~~~~~l~~~~-~~~~~l~~~~~~L~pgG~l~i~ 152 (242)
T 3l8d_A 112 -----FENEQFEAIMAINSLEWTE-EPLRALNEIKRVLKSDGYACIA 152 (242)
T ss_dssp -----SCTTCEEEEEEESCTTSSS-CHHHHHHHHHHHEEEEEEEEEE
T ss_pred -----CCCCCccEEEEcChHhhcc-CHHHHHHHHHHHhCCCeEEEEE
Confidence 2234444555667788873 4444444445678998665554
No 70
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=84.89 E-value=5.3 Score=35.59 Aligned_cols=107 Identities=15% Similarity=0.082 Sum_probs=59.2
Q ss_pred HHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEe
Q 047247 174 AILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVI 253 (386)
Q Consensus 174 aILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v 253 (386)
.+++.+...+.-.|+|+|.|.|.-...|.+.+ |..++|||+.. ...++.+.++ .-.++|...
T Consensus 24 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-------~~~~v~~~D~s---~~~~~~a~~~--------~~~~~~~~~ 85 (259)
T 2p35_A 24 DLLAQVPLERVLNGYDLGCGPGNSTELLTDRY-------GVNVITGIDSD---DDMLEKAADR--------LPNTNFGKA 85 (259)
T ss_dssp HHHTTCCCSCCSSEEEETCTTTHHHHHHHHHH-------CTTSEEEEESC---HHHHHHHHHH--------STTSEEEEC
T ss_pred HHHHhcCCCCCCEEEEecCcCCHHHHHHHHhC-------CCCEEEEEECC---HHHHHHHHHh--------CCCcEEEEC
Confidence 45555554555689999999987555554443 23589999852 2233333322 223444433
Q ss_pred ecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEee
Q 047247 254 TGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIVE 310 (386)
Q Consensus 254 ~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlvE 310 (386)
+++++. .++..=+|-|...||++. + ...+|+.+ +.|+|.-.+++.
T Consensus 86 ----d~~~~~------~~~~fD~v~~~~~l~~~~-~-~~~~l~~~~~~L~pgG~l~~~ 131 (259)
T 2p35_A 86 ----DLATWK------PAQKADLLYANAVFQWVP-D-HLAVLSQLMDQLESGGVLAVQ 131 (259)
T ss_dssp ----CTTTCC------CSSCEEEEEEESCGGGST-T-HHHHHHHHGGGEEEEEEEEEE
T ss_pred ----ChhhcC------ccCCcCEEEEeCchhhCC-C-HHHHHHHHHHhcCCCeEEEEE
Confidence 344333 122233344556688874 3 44566655 678998665553
No 71
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=84.88 E-value=4.1 Score=33.92 Aligned_cols=102 Identities=7% Similarity=-0.001 Sum_probs=56.4
Q ss_pred HHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc-eEEEEe
Q 047247 175 ILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP-FEFKVI 253 (386)
Q Consensus 175 ILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip-FeF~~v 253 (386)
|++.+.-.+.-+|+|+|.|.|. +...|+. +..++|||+.. ...++.+.++ ++..|++ .+|..-
T Consensus 27 ~~~~~~~~~~~~vLdiG~G~G~----~~~~l~~-----~~~~v~~vD~~---~~~~~~a~~~----~~~~~~~~~~~~~~ 90 (183)
T 2yxd_A 27 SIGKLNLNKDDVVVDVGCGSGG----MTVEIAK-----RCKFVYAIDYL---DGAIEVTKQN----LAKFNIKNCQIIKG 90 (183)
T ss_dssp HHHHHCCCTTCEEEEESCCCSH----HHHHHHT-----TSSEEEEEECS---HHHHHHHHHH----HHHTTCCSEEEEES
T ss_pred HHHHcCCCCCCEEEEeCCCCCH----HHHHHHh-----cCCeEEEEeCC---HHHHHHHHHH----HHHcCCCcEEEEEC
Confidence 3444443445589999999986 3444444 34799999952 2344433333 3445653 444332
Q ss_pred ecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHHHhcCCcEEEEe
Q 047247 254 TGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMFQSLKPKVVTIV 309 (386)
Q Consensus 254 ~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~ir~L~P~vvvlv 309 (386)
++.+.-+. ..=+.++.+.. .....+|+.++++ |.-.+++
T Consensus 91 ----d~~~~~~~----~~~D~i~~~~~--------~~~~~~l~~~~~~-~gG~l~~ 129 (183)
T 2yxd_A 91 ----RAEDVLDK----LEFNKAFIGGT--------KNIEKIIEILDKK-KINHIVA 129 (183)
T ss_dssp ----CHHHHGGG----CCCSEEEECSC--------SCHHHHHHHHHHT-TCCEEEE
T ss_pred ----CccccccC----CCCcEEEECCc--------ccHHHHHHHHhhC-CCCEEEE
Confidence 23331111 12245555544 2356789999888 8755555
No 72
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=84.02 E-value=5.4 Score=38.88 Aligned_cols=115 Identities=13% Similarity=0.084 Sum_probs=65.8
Q ss_pred HHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEE
Q 047247 173 GAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKV 252 (386)
Q Consensus 173 qaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~ 252 (386)
++|++...-.+.-.|+|+|.|.| .+...++.+ |. -+++||+.. . .++. ..+.++..|++=....
T Consensus 53 ~~i~~~~~~~~~~~VLDlGcGtG----~ls~~la~~--g~--~~V~gvD~s-~---~~~~----a~~~~~~~~~~~~v~~ 116 (376)
T 3r0q_C 53 NAVFQNKHHFEGKTVLDVGTGSG----ILAIWSAQA--GA--RKVYAVEAT-K---MADH----ARALVKANNLDHIVEV 116 (376)
T ss_dssp HHHHTTTTTTTTCEEEEESCTTT----HHHHHHHHT--TC--SEEEEEESS-T---THHH----HHHHHHHTTCTTTEEE
T ss_pred HHHHhccccCCCCEEEEeccCcC----HHHHHHHhc--CC--CEEEEEccH-H---HHHH----HHHHHHHcCCCCeEEE
Confidence 44555544445568999999998 344555665 22 399999963 2 3322 3344555676622333
Q ss_pred eecCCccccccccccccCCCceEEEeecccccccc-cchHHHHHHHH-HhcCCcEEEEeee
Q 047247 253 ITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVA-VEERGAVIQMF-QSLKPKVVTIVEE 311 (386)
Q Consensus 253 v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~-~~~r~~vL~~i-r~L~P~vvvlvE~ 311 (386)
+.. +++++... ..=+.|+.+++ .|.+. ...++.+|+.+ +-|+|.-+++...
T Consensus 117 ~~~--d~~~~~~~----~~~D~Iv~~~~--~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 117 IEG--SVEDISLP----EKVDVIISEWM--GYFLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp EES--CGGGCCCS----SCEEEEEECCC--BTTBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred EEC--chhhcCcC----CcceEEEEcCh--hhcccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 332 45555432 22245555443 33332 24477788887 7799998877643
No 73
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=83.92 E-value=9.5 Score=33.42 Aligned_cols=109 Identities=13% Similarity=0.063 Sum_probs=58.3
Q ss_pred HHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEE
Q 047247 173 GAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKV 252 (386)
Q Consensus 173 qaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~ 252 (386)
..|.+.+.....-.|+|+|.|.|. +...|+.+ |. -++|||+.. ...++.+.+++.. -.++|..
T Consensus 33 ~~l~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~--~~--~~v~~vD~s---~~~~~~a~~~~~~------~~~~~~~ 95 (243)
T 3bkw_A 33 PALRAMLPEVGGLRIVDLGCGFGW----FCRWAHEH--GA--SYVLGLDLS---EKMLARARAAGPD------TGITYER 95 (243)
T ss_dssp HHHHHHSCCCTTCEEEEETCTTCH----HHHHHHHT--TC--SEEEEEESC---HHHHHHHHHTSCS------SSEEEEE
T ss_pred HHHHHhccccCCCEEEEEcCcCCH----HHHHHHHC--CC--CeEEEEcCC---HHHHHHHHHhccc------CCceEEE
Confidence 456666665556689999999984 44455655 21 289999852 2233333222211 1234433
Q ss_pred eecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEe
Q 047247 253 ITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIV 309 (386)
Q Consensus 253 v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlv 309 (386)
. +++++. ..++..=+|-|...|||+. + ...+|+.+ +.|+|.-.+++
T Consensus 96 ~----d~~~~~-----~~~~~fD~v~~~~~l~~~~-~-~~~~l~~~~~~L~pgG~l~~ 142 (243)
T 3bkw_A 96 A----DLDKLH-----LPQDSFDLAYSSLALHYVE-D-VARLFRTVHQALSPGGHFVF 142 (243)
T ss_dssp C----CGGGCC-----CCTTCEEEEEEESCGGGCS-C-HHHHHHHHHHHEEEEEEEEE
T ss_pred c----Chhhcc-----CCCCCceEEEEeccccccc-h-HHHHHHHHHHhcCcCcEEEE
Confidence 2 243332 2223222333445688874 3 34556554 66899865554
No 74
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=83.62 E-value=5.8 Score=35.27 Aligned_cols=105 Identities=9% Similarity=0.065 Sum_probs=57.7
Q ss_pred ceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHc-CCceEEEEeecCCcccc
Q 047247 183 TKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLM-GVPFEFKVITGLNRLVE 261 (386)
Q Consensus 183 ~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~l-gipFeF~~v~~~~~~e~ 261 (386)
+.-.|+|+|.|.|. +...|+.+. ..++|||+.. ...++.+.+++ ... +...+|... ++++
T Consensus 79 ~~~~vLDiGcG~G~----~~~~l~~~~----~~~v~~vD~s---~~~~~~a~~~~----~~~~~~~~~~~~~----d~~~ 139 (241)
T 2ex4_A 79 GTSCALDCGAGIGR----ITKRLLLPL----FREVDMVDIT---EDFLVQAKTYL----GEEGKRVRNYFCC----GLQD 139 (241)
T ss_dssp CCSEEEEETCTTTH----HHHHTTTTT----CSEEEEEESC---HHHHHHHHHHT----GGGGGGEEEEEEC----CGGG
T ss_pred CCCEEEEECCCCCH----HHHHHHHhc----CCEEEEEeCC---HHHHHHHHHHh----hhcCCceEEEEEc----Chhh
Confidence 35689999999875 444555553 2489999852 23444443333 222 223444332 3444
Q ss_pred ccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEe-ee
Q 047247 262 LTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIV-EE 311 (386)
Q Consensus 262 l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlv-E~ 311 (386)
+.. .++..=+|-|...|||+....+..+|+.+ +.|+|.-++++ +.
T Consensus 140 ~~~-----~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 186 (241)
T 2ex4_A 140 FTP-----EPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDN 186 (241)
T ss_dssp CCC-----CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCC-----CCCCEEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEc
Confidence 332 22222233344568888654455677665 55899865554 44
No 75
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=83.24 E-value=6.5 Score=35.35 Aligned_cols=97 Identities=16% Similarity=0.144 Sum_probs=56.6
Q ss_pred eeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEeecCCcccccc
Q 047247 184 KLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVITGLNRLVELT 263 (386)
Q Consensus 184 ~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v~~~~~~e~l~ 263 (386)
.-.|+|+|.|.|. +...|+.+ + .++|||+.. ...++.+.+++. ..+|... +++++.
T Consensus 51 ~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~s---~~~~~~a~~~~~--------~~~~~~~----d~~~~~ 106 (263)
T 3pfg_A 51 AASLLDVACGTGM----HLRHLADS--F---GTVEGLELS---ADMLAIARRRNP--------DAVLHHG----DMRDFS 106 (263)
T ss_dssp CCEEEEETCTTSH----HHHHHTTT--S---SEEEEEESC---HHHHHHHHHHCT--------TSEEEEC----CTTTCC
T ss_pred CCcEEEeCCcCCH----HHHHHHHc--C---CeEEEEECC---HHHHHHHHhhCC--------CCEEEEC----ChHHCC
Confidence 3579999999984 56666666 3 289999852 233433333321 3333332 344433
Q ss_pred ccccccCCCceEEEeecc-ccccccc-chHHHHHHHH-HhcCCcEEEEee
Q 047247 264 KGTLGVKEDEAVAVNCIG-ALRRVAV-EERGAVIQMF-QSLKPKVVTIVE 310 (386)
Q Consensus 264 ~~~L~~~~~EaLaVN~~~-~Lh~l~~-~~r~~vL~~i-r~L~P~vvvlvE 310 (386)
. ++..=+|-|.+ .|||+.. .....+|+.+ +.|+|.-+++++
T Consensus 107 ~------~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 107 L------GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp C------SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred c------cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 2 33333455555 7888852 3455666665 557999888875
No 76
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=82.81 E-value=8.8 Score=37.23 Aligned_cols=116 Identities=13% Similarity=0.028 Sum_probs=64.1
Q ss_pred ceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHc-C----CceEEEEeecCC
Q 047247 183 TKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLM-G----VPFEFKVITGLN 257 (386)
Q Consensus 183 ~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~l-g----ipFeF~~v~~~~ 257 (386)
+.-.|+|+|.|.|.--..|.+.+ .|..++|||+. +...++.+.+++.+.+... | -..+|..-
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~------~~~~~v~gvD~---s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~---- 149 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLV------GEHGKVIGVDM---LDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKG---- 149 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH------TTTCEEEEEEC---CHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEES----
T ss_pred CCCEEEEecCccCHHHHHHHHHh------CCCCEEEEEEC---CHHHHHHHHHHHHHhhhhcccccCCCceEEEEc----
Confidence 34579999999985322333322 12369999995 3346777777777766554 4 34555543
Q ss_pred cccccccc-ccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEe-eecC
Q 047247 258 RLVELTKG-TLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIV-EEEA 313 (386)
Q Consensus 258 ~~e~l~~~-~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlv-E~ea 313 (386)
+++++... .....++..=+|-+...||++. ++ ..+|+.+ +-|+|.-.+++ +...
T Consensus 150 d~~~l~~~~~~~~~~~~fD~V~~~~~l~~~~-d~-~~~l~~~~r~LkpgG~l~i~~~~~ 206 (383)
T 4fsd_A 150 FIENLATAEPEGVPDSSVDIVISNCVCNLST-NK-LALFKEIHRVLRDGGELYFSDVYA 206 (383)
T ss_dssp CTTCGGGCBSCCCCTTCEEEEEEESCGGGCS-CH-HHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred cHHHhhhcccCCCCCCCEEEEEEccchhcCC-CH-HHHHHHHHHHcCCCCEEEEEEecc
Confidence 34443211 0122333333344445577764 33 4555555 66899865554 4433
No 77
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=82.78 E-value=14 Score=31.48 Aligned_cols=98 Identities=18% Similarity=0.129 Sum_probs=52.4
Q ss_pred EEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEeecCCcccccccc
Q 047247 186 HIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVITGLNRLVELTKG 265 (386)
Q Consensus 186 HIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v~~~~~~e~l~~~ 265 (386)
.|+|+|.|.|. +...|+.+ | .++|||+.. ...++.+.+++ +..|+.++|... ++.++.
T Consensus 32 ~vLdiGcG~G~----~~~~l~~~--~---~~v~~vD~s---~~~~~~a~~~~----~~~~~~~~~~~~----d~~~~~-- 89 (202)
T 2kw5_A 32 KILCLAEGEGR----NACFLASL--G---YEVTAVDQS---SVGLAKAKQLA----QEKGVKITTVQS----NLADFD-- 89 (202)
T ss_dssp EEEECCCSCTH----HHHHHHTT--T---CEEEEECSS---HHHHHHHHHHH----HHHTCCEEEECC----BTTTBS--
T ss_pred CEEEECCCCCH----hHHHHHhC--C---CeEEEEECC---HHHHHHHHHHH----HhcCCceEEEEc----ChhhcC--
Confidence 89999999875 34556665 2 489999952 23444443333 334555555432 344332
Q ss_pred ccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEee
Q 047247 266 TLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIVE 310 (386)
Q Consensus 266 ~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlvE 310 (386)
+.-..=+.|+.+ +.|+.......+|+.+ +.|+|.-.+++.
T Consensus 90 -~~~~~fD~v~~~----~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 130 (202)
T 2kw5_A 90 -IVADAWEGIVSI----FCHLPSSLRQQLYPKVYQGLKPGGVFILE 130 (202)
T ss_dssp -CCTTTCSEEEEE----CCCCCHHHHHHHHHHHHTTCCSSEEEEEE
T ss_pred -CCcCCccEEEEE----hhcCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 111112444443 2233323455666665 557998666654
No 78
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=82.56 E-value=2.7 Score=41.05 Aligned_cols=110 Identities=15% Similarity=0.107 Sum_probs=63.8
Q ss_pred HHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEE
Q 047247 173 GAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKV 252 (386)
Q Consensus 173 qaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~ 252 (386)
..|++.+.-...-.|+|+|.|.|. ++..|+.+ | .++|||+.. ...+ +.|+..|++..-..
T Consensus 97 ~~l~~~~~~~~~~~VLDiGcG~G~----~~~~l~~~--g---~~v~gvD~s---~~~~--------~~a~~~~~~~~~~~ 156 (416)
T 4e2x_A 97 RDFLATELTGPDPFIVEIGCNDGI----MLRTIQEA--G---VRHLGFEPS---SGVA--------AKAREKGIRVRTDF 156 (416)
T ss_dssp HHHHHTTTCSSSCEEEEETCTTTT----THHHHHHT--T---CEEEEECCC---HHHH--------HHHHTTTCCEECSC
T ss_pred HHHHHHhCCCCCCEEEEecCCCCH----HHHHHHHc--C---CcEEEECCC---HHHH--------HHHHHcCCCcceee
Confidence 345566654556789999999998 55566655 2 399999952 2222 34555566642111
Q ss_pred eecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEee
Q 047247 253 ITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIVE 310 (386)
Q Consensus 253 v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlvE 310 (386)
+..-....+...++..=+|-+...|||+. + ...+|+.+ +-|+|.-+++++
T Consensus 157 ------~~~~~~~~l~~~~~~fD~I~~~~vl~h~~-d-~~~~l~~~~r~LkpgG~l~i~ 207 (416)
T 4e2x_A 157 ------FEKATADDVRRTEGPANVIYAANTLCHIP-Y-VQSVLEGVDALLAPDGVFVFE 207 (416)
T ss_dssp ------CSHHHHHHHHHHHCCEEEEEEESCGGGCT-T-HHHHHHHHHHHEEEEEEEEEE
T ss_pred ------echhhHhhcccCCCCEEEEEECChHHhcC-C-HHHHHHHHHHHcCCCeEEEEE
Confidence 11111112222234444555667789985 4 45566655 568998777765
No 79
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=82.41 E-value=13 Score=34.03 Aligned_cols=106 Identities=20% Similarity=0.150 Sum_probs=59.0
Q ss_pred CceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEeecCCcccc
Q 047247 182 ETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVITGLNRLVE 261 (386)
Q Consensus 182 ~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v~~~~~~e~ 261 (386)
.+...|+|+|.|.| .+...|+.+- |+..++|||+.. ...++.+.+ .++..+..++|..- ++++
T Consensus 21 ~~~~~vLDiGcG~G----~~~~~l~~~~--~~~~~v~gvD~s---~~~~~~a~~----~~~~~~~~v~~~~~----d~~~ 83 (284)
T 3gu3_A 21 TKPVHIVDYGCGYG----YLGLVLMPLL--PEGSKYTGIDSG---ETLLAEARE----LFRLLPYDSEFLEG----DATE 83 (284)
T ss_dssp CSCCEEEEETCTTT----HHHHHHTTTS--CTTCEEEEEESC---HHHHHHHHH----HHHSSSSEEEEEES----CTTT
T ss_pred CCCCeEEEecCCCC----HHHHHHHHhC--CCCCEEEEEECC---HHHHHHHHH----HHHhcCCceEEEEc----chhh
Confidence 45578999999998 3455566653 234799999952 223333332 23344554555432 3444
Q ss_pred ccccccccCCCceEEEeecccccccccchHHHHHHH-HHhcCCcEEEE-eeec
Q 047247 262 LTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQM-FQSLKPKVVTI-VEEE 312 (386)
Q Consensus 262 l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~-ir~L~P~vvvl-vE~e 312 (386)
+.. ++..=+|-|...||++. ++. .+|+. .+.|+|.-.++ +|..
T Consensus 84 ~~~------~~~fD~v~~~~~l~~~~-~~~-~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 84 IEL------NDKYDIAICHAFLLHMT-TPE-TMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp CCC------SSCEEEEEEESCGGGCS-SHH-HHHHHHHHTEEEEEEEEEEECC
T ss_pred cCc------CCCeeEEEECChhhcCC-CHH-HHHHHHHHHcCCCCEEEEEecc
Confidence 332 22233444555678874 444 45554 56789986655 4444
No 80
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=82.25 E-value=8.2 Score=32.92 Aligned_cols=109 Identities=10% Similarity=0.061 Sum_probs=59.5
Q ss_pred eEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCC-ceEEEEeecCCcccccc
Q 047247 185 LHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGV-PFEFKVITGLNRLVELT 263 (386)
Q Consensus 185 VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgi-pFeF~~v~~~~~~e~l~ 263 (386)
-.|+|+|.|.|.- ...++.+. .-++|||+. +...++.+.++ ++..|+ ..+|..- ++.++.
T Consensus 46 ~~vLDlgcG~G~~----~~~~~~~~----~~~v~~vD~---~~~~~~~a~~~----~~~~~~~~v~~~~~----d~~~~~ 106 (189)
T 3p9n_A 46 LAVLDLYAGSGAL----GLEALSRG----AASVLFVES---DQRSAAVIARN----IEALGLSGATLRRG----AVAAVV 106 (189)
T ss_dssp CEEEEETCTTCHH----HHHHHHTT----CSEEEEEEC---CHHHHHHHHHH----HHHHTCSCEEEEES----CHHHHH
T ss_pred CEEEEeCCCcCHH----HHHHHHCC----CCeEEEEEC---CHHHHHHHHHH----HHHcCCCceEEEEc----cHHHHH
Confidence 4699999999842 22233442 358999995 22344444333 344565 2444332 344332
Q ss_pred ccccccCCCceEEEeecccccccccchHHHHHHHHHh---cCCcEEEEeeecCCCC
Q 047247 264 KGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMFQS---LKPKVVTIVEEEADLT 316 (386)
Q Consensus 264 ~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~ir~---L~P~vvvlvE~ea~~n 316 (386)
.. +.-..=+.|+.|..+ |+. ....+.+|..+.. |+|.-+++++.+....
T Consensus 107 ~~-~~~~~fD~i~~~~p~--~~~-~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~~ 158 (189)
T 3p9n_A 107 AA-GTTSPVDLVLADPPY--NVD-SADVDAILAALGTNGWTREGTVAVVERATTCA 158 (189)
T ss_dssp HH-CCSSCCSEEEECCCT--TSC-HHHHHHHHHHHHHSSSCCTTCEEEEEEETTSC
T ss_pred hh-ccCCCccEEEECCCC--Ccc-hhhHHHHHHHHHhcCccCCCeEEEEEecCCCC
Confidence 11 111222577777663 322 1335567777654 8999988887765443
No 81
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=82.10 E-value=4.8 Score=38.70 Aligned_cols=115 Identities=15% Similarity=0.076 Sum_probs=63.3
Q ss_pred HHHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEE
Q 047247 172 NGAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFK 251 (386)
Q Consensus 172 NqaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~ 251 (386)
.++|++.+...+.-+|+|+|.|.|. |...++.++ .-++|||+.. +.++.+ .+.++..|+.=...
T Consensus 39 ~~~i~~~l~~~~~~~VLDiGcGtG~----ls~~la~~g----~~~V~~vD~s----~~~~~a----~~~~~~~~l~~~v~ 102 (348)
T 2y1w_A 39 QRAILQNHTDFKDKIVLDVGCGSGI----LSFFAAQAG----ARKIYAVEAS----TMAQHA----EVLVKSNNLTDRIV 102 (348)
T ss_dssp HHHHHHTGGGTTTCEEEEETCTTSH----HHHHHHHTT----CSEEEEEECS----THHHHH----HHHHHHTTCTTTEE
T ss_pred HHHHHhccccCCcCEEEEcCCCccH----HHHHHHhCC----CCEEEEECCH----HHHHHH----HHHHHHcCCCCcEE
Confidence 3677777765555689999999884 455566652 3599999963 123222 23334456532223
Q ss_pred EeecCCccccccccccccCCCceEEEeecccccccccc-hHHHHHHHHHhcCCcEEEEee
Q 047247 252 VITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVE-ERGAVIQMFQSLKPKVVTIVE 310 (386)
Q Consensus 252 ~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~-~r~~vL~~ir~L~P~vvvlvE 310 (386)
.+.. +++++... ..=+.|+.+.+ ++|+... ..+.+...-+-|+|.-+++..
T Consensus 103 ~~~~--d~~~~~~~----~~~D~Ivs~~~--~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 103 VIPG--KVEEVSLP----EQVDIIISEPM--GYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp EEES--CTTTCCCS----SCEEEEEECCC--BTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred EEEc--chhhCCCC----CceeEEEEeCc--hhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 3332 45554321 11134444333 5555433 344555555778999888754
No 82
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=81.90 E-value=1.8 Score=38.68 Aligned_cols=104 Identities=11% Similarity=0.111 Sum_probs=55.8
Q ss_pred eEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEeecCCccccccc
Q 047247 185 LHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVITGLNRLVELTK 264 (386)
Q Consensus 185 VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v~~~~~~e~l~~ 264 (386)
-.|+|+|.|.|. +...|+.+ ++ ++|||+.. ...++.+.+++ . .-..+|... ++.++..
T Consensus 58 ~~vLD~GcG~G~----~~~~la~~--~~---~v~gvD~s---~~~~~~a~~~~----~--~~~~~~~~~----d~~~~~~ 115 (245)
T 3ggd_A 58 LPLIDFACGNGT----QTKFLSQF--FP---RVIGLDVS---KSALEIAAKEN----T--AANISYRLL----DGLVPEQ 115 (245)
T ss_dssp SCEEEETCTTSH----HHHHHHHH--SS---CEEEEESC---HHHHHHHHHHS----C--CTTEEEEEC----CTTCHHH
T ss_pred CeEEEEcCCCCH----HHHHHHHh--CC---CEEEEECC---HHHHHHHHHhC----c--ccCceEEEC----ccccccc
Confidence 468999999874 44455554 22 89999852 23344333332 1 113444432 3443322
Q ss_pred cccccCCCc-eEEEeecccccccccchHHHHHHHH-HhcCCcEE-EEeee
Q 047247 265 GTLGVKEDE-AVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVV-TIVEE 311 (386)
Q Consensus 265 ~~L~~~~~E-aLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vv-vlvE~ 311 (386)
.. ....+. .-+|-+...+|++....+..+|+.+ +.|+|.-. ++++.
T Consensus 116 ~~-~~~~~~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 116 AA-QIHSEIGDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp HH-HHHHHHCSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred cc-ccccccCccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 11 011001 2345555668888655666777766 55899764 55554
No 83
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=81.81 E-value=2 Score=40.23 Aligned_cols=108 Identities=12% Similarity=0.056 Sum_probs=57.3
Q ss_pred HHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEE
Q 047247 173 GAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKV 252 (386)
Q Consensus 173 qaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~ 252 (386)
..|++.+.-...-+|+|+|.|.|. +...|+.+ | -+||||+.. ...++.+.+++.. ..+..
T Consensus 35 ~~il~~l~l~~g~~VLDlGcGtG~----~a~~La~~--g---~~V~gvD~S---~~ml~~Ar~~~~~----~~v~~---- 94 (261)
T 3iv6_A 35 ENDIFLENIVPGSTVAVIGASTRF----LIEKALER--G---ASVTVFDFS---QRMCDDLAEALAD----RCVTI---- 94 (261)
T ss_dssp HHHHHTTTCCTTCEEEEECTTCHH----HHHHHHHT--T---CEEEEEESC---HHHHHHHHHHTSS----SCCEE----
T ss_pred HHHHHhcCCCCcCEEEEEeCcchH----HHHHHHhc--C---CEEEEEECC---HHHHHHHHHHHHh----cccee----
Confidence 345666655556689999999885 45566665 2 389999952 2344433333221 11221
Q ss_pred eecCCccccccc---cccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEe
Q 047247 253 ITGLNRLVELTK---GTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIV 309 (386)
Q Consensus 253 v~~~~~~e~l~~---~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlv 309 (386)
++++++. ..+. .+=+.|+.| ..|||+.......+|+.+ +-| |.-.+++
T Consensus 95 -----~~~~~~~~~~~~~~-~~fD~Vv~~--~~l~~~~~~~~~~~l~~l~~lL-PGG~l~l 146 (261)
T 3iv6_A 95 -----DLLDITAEIPKELA-GHFDFVLND--RLINRFTTEEARRACLGMLSLV-GSGTVRA 146 (261)
T ss_dssp -----EECCTTSCCCGGGT-TCCSEEEEE--SCGGGSCHHHHHHHHHHHHHHH-TTSEEEE
T ss_pred -----eeeecccccccccC-CCccEEEEh--hhhHhCCHHHHHHHHHHHHHhC-cCcEEEE
Confidence 2444433 1111 122454444 457887644444455544 557 8865544
No 84
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=80.60 E-value=17 Score=31.81 Aligned_cols=107 Identities=15% Similarity=0.108 Sum_probs=58.7
Q ss_pred HHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEee
Q 047247 175 ILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVIT 254 (386)
Q Consensus 175 ILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v~ 254 (386)
|++.+... -.|+|+|.|.|. +...|+.+ .++|||+.. ...++.+.+++ +..+...+|...
T Consensus 27 ~~~~~~~~--~~vLdiG~G~G~----~~~~l~~~------~~v~~vD~s---~~~~~~a~~~~----~~~~~~~~~~~~- 86 (243)
T 3d2l_A 27 VLEQVEPG--KRIADIGCGTGT----ATLLLADH------YEVTGVDLS---EEMLEIAQEKA----METNRHVDFWVQ- 86 (243)
T ss_dssp HHHHSCTT--CEEEEESCTTCH----HHHHHTTT------SEEEEEESC---HHHHHHHHHHH----HHTTCCCEEEEC-
T ss_pred HHHHcCCC--CeEEEecCCCCH----HHHHHhhC------CeEEEEECC---HHHHHHHHHhh----hhcCCceEEEEc-
Confidence 44444432 478999999984 44556655 589999952 23444444333 334445555443
Q ss_pred cCCccccccccccccCCCceEEEeecc-cccccc-cchHHHHHHHH-HhcCCcEEEEee
Q 047247 255 GLNRLVELTKGTLGVKEDEAVAVNCIG-ALRRVA-VEERGAVIQMF-QSLKPKVVTIVE 310 (386)
Q Consensus 255 ~~~~~e~l~~~~L~~~~~EaLaVN~~~-~Lh~l~-~~~r~~vL~~i-r~L~P~vvvlvE 310 (386)
++.++.. . +..=+|-|.+ .+||+. ......+|+.+ +.|+|.-+++++
T Consensus 87 ---d~~~~~~-----~-~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 87 ---DMRELEL-----P-EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp ---CGGGCCC-----S-SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---ChhhcCC-----C-CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 2433321 1 2222222333 678774 23345566665 568999777764
No 85
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=80.29 E-value=7.8 Score=35.40 Aligned_cols=102 Identities=14% Similarity=0.120 Sum_probs=56.0
Q ss_pred CceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc-eEEEEeecCCccc
Q 047247 182 ETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP-FEFKVITGLNRLV 260 (386)
Q Consensus 182 ~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip-FeF~~v~~~~~~e 260 (386)
...-+|+|+|.|.|.--..|-+. . |..+||+|+.. ...++ .+.+-++.+|+. .+|..- +++
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~---~----~~~~v~~vD~s---~~~~~----~a~~~~~~~~l~~v~~~~~----d~~ 140 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIV---R----PELELVLVDAT---RKKVA----FVERAIEVLGLKGARALWG----RAE 140 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHH---C----TTCEEEEEESC---HHHHH----HHHHHHHHHTCSSEEEEEC----CHH
T ss_pred CCCCEEEEEcCCCCHHHHHHHHH---C----CCCEEEEEECC---HHHHH----HHHHHHHHhCCCceEEEEC----cHH
Confidence 34458999999999754444332 1 45799999952 22343 333445566775 444332 466
Q ss_pred cccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEe
Q 047247 261 ELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIV 309 (386)
Q Consensus 261 ~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlv 309 (386)
++......-..=+.|+.+.. .+.+.++..+ +-|+|.-.+++
T Consensus 141 ~~~~~~~~~~~fD~I~s~a~--------~~~~~ll~~~~~~LkpgG~l~~ 182 (249)
T 3g89_A 141 VLAREAGHREAYARAVARAV--------APLCVLSELLLPFLEVGGAAVA 182 (249)
T ss_dssp HHTTSTTTTTCEEEEEEESS--------CCHHHHHHHHGGGEEEEEEEEE
T ss_pred HhhcccccCCCceEEEECCc--------CCHHHHHHHHHHHcCCCeEEEE
Confidence 55432100011134444432 2346677766 56799876655
No 86
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=79.95 E-value=3.5 Score=37.11 Aligned_cols=107 Identities=13% Similarity=0.044 Sum_probs=56.0
Q ss_pred eeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc-eEEEEeecCCccccc
Q 047247 184 KLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP-FEFKVITGLNRLVEL 262 (386)
Q Consensus 184 ~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip-FeF~~v~~~~~~e~l 262 (386)
.=+|+|+|.|.| .+...||.+. |..++|||+...+ .+-+...+..+-++..|++ .+|..- +.+++
T Consensus 25 ~~~vLDiGCG~G----~~~~~la~~~---~~~~v~GvD~s~~---~ml~~A~~A~~~~~~~~~~~v~~~~~----d~~~l 90 (225)
T 3p2e_A 25 DRVHIDLGTGDG----RNIYKLAIND---QNTFYIGIDPVKE---NLFDISKKIIKKPSKGGLSNVVFVIA----AAESL 90 (225)
T ss_dssp SEEEEEETCTTS----HHHHHHHHTC---TTEEEEEECSCCG---GGHHHHHHHTSCGGGTCCSSEEEECC----BTTBC
T ss_pred CCEEEEEeccCc----HHHHHHHHhC---CCCEEEEEeCCHH---HHHHHHHHHHHHHHHcCCCCeEEEEc----CHHHh
Confidence 346899999988 4556666553 4589999996421 2212222222233445665 555332 45555
Q ss_pred cccccccCCCceEEEeecccccc----cccchHHHHHHHH-HhcCCcEEEEe
Q 047247 263 TKGTLGVKEDEAVAVNCIGALRR----VAVEERGAVIQMF-QSLKPKVVTIV 309 (386)
Q Consensus 263 ~~~~L~~~~~EaLaVN~~~~Lh~----l~~~~r~~vL~~i-r~L~P~vvvlv 309 (386)
. ..+ .|-+..|.+.+...+ ....+ ..+|+.+ |-|+|.-.++.
T Consensus 91 ~-~~~---~d~v~~i~~~~~~~~~~~~~~~~~-~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 91 P-FEL---KNIADSISILFPWGTLLEYVIKPN-RDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp C-GGG---TTCEEEEEEESCCHHHHHHHHTTC-HHHHHHHHTTEEEEEEEEE
T ss_pred h-hhc---cCeEEEEEEeCCCcHHhhhhhcch-HHHHHHHHHhcCCCcEEEE
Confidence 2 211 144444444443222 21222 3455555 56899977666
No 87
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=79.88 E-value=18 Score=32.49 Aligned_cols=113 Identities=12% Similarity=0.115 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHc
Q 047247 165 TFGHVASNGAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLM 244 (386)
Q Consensus 165 kfa~~tANqaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~l 244 (386)
+..+-..-..|.+.+. +.-.|+|+|.|.|. +...|+.+ | .++|||+.. ...++.+.++..
T Consensus 38 ~~~~~~~~~~l~~~~~--~~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~s---~~~l~~a~~~~~------ 97 (260)
T 2avn_A 38 KLYHRLIGSFLEEYLK--NPCRVLDLGGGTGK----WSLFLQER--G---FEVVLVDPS---KEMLEVAREKGV------ 97 (260)
T ss_dssp HHHHHHHHHHHHHHCC--SCCEEEEETCTTCH----HHHHHHTT--T---CEEEEEESC---HHHHHHHHHHTC------
T ss_pred hHHHHHHHHHHHHhcC--CCCeEEEeCCCcCH----HHHHHHHc--C---CeEEEEeCC---HHHHHHHHhhcC------
Confidence 3333333444444443 44589999999875 44556665 2 489999952 223433332211
Q ss_pred CCceEEEEeecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEee
Q 047247 245 GVPFEFKVITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIVE 310 (386)
Q Consensus 245 gipFeF~~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlvE 310 (386)
+. |... +++++. ..++..=+|-|...++|+..+ ...+|+.+ +.|+|.-.+++.
T Consensus 98 ~~---~~~~----d~~~~~-----~~~~~fD~v~~~~~~~~~~~~-~~~~l~~~~~~LkpgG~l~~~ 151 (260)
T 2avn_A 98 KN---VVEA----KAEDLP-----FPSGAFEAVLALGDVLSYVEN-KDKAFSEIRRVLVPDGLLIAT 151 (260)
T ss_dssp SC---EEEC----CTTSCC-----SCTTCEEEEEECSSHHHHCSC-HHHHHHHHHHHEEEEEEEEEE
T ss_pred CC---EEEC----cHHHCC-----CCCCCEEEEEEcchhhhcccc-HHHHHHHHHHHcCCCeEEEEE
Confidence 11 2221 344332 222322233344445555445 45566555 668998666653
No 88
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=79.70 E-value=9.3 Score=33.33 Aligned_cols=109 Identities=14% Similarity=0.171 Sum_probs=56.9
Q ss_pred eeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc-eEEEEeecCCccccc
Q 047247 184 KLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP-FEFKVITGLNRLVEL 262 (386)
Q Consensus 184 ~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip-FeF~~v~~~~~~e~l 262 (386)
.-.|+|+|.|.|. +...|+.+. |..+++||+. +...++.+.++ ++..|++ ++|..- ++.++
T Consensus 42 ~~~vLDiGcG~G~----~~~~la~~~---p~~~v~gvD~---s~~~l~~a~~~----~~~~~~~~v~~~~~----d~~~~ 103 (214)
T 1yzh_A 42 NPIHVEVGSGKGA----FVSGMAKQN---PDINYIGIDI---QKSVLSYALDK----VLEVGVPNIKLLWV----DGSDL 103 (214)
T ss_dssp CCEEEEESCTTSH----HHHHHHHHC---TTSEEEEEES---CHHHHHHHHHH----HHHHCCSSEEEEEC----CSSCG
T ss_pred CCeEEEEccCcCH----HHHHHHHHC---CCCCEEEEEc---CHHHHHHHHHH----HHHcCCCCEEEEeC----CHHHH
Confidence 3469999999984 334455542 3579999995 23344444433 3445653 444332 34433
Q ss_pred cccccccCCCceEEEeecccccccccchH----HHHHHHHH-hcCCcEEEEeee
Q 047247 263 TKGTLGVKEDEAVAVNCIGALRRVAVEER----GAVIQMFQ-SLKPKVVTIVEE 311 (386)
Q Consensus 263 ~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r----~~vL~~ir-~L~P~vvvlvE~ 311 (386)
.. .+.-..=+.|++|...........++ ..+|+.+. .|+|.-+++++-
T Consensus 104 ~~-~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 104 TD-YFEDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp GG-TSCTTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred Hh-hcCCCCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEe
Confidence 21 11111125677775421111001122 46777765 589998777754
No 89
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=79.28 E-value=2.1 Score=38.26 Aligned_cols=96 Identities=11% Similarity=0.052 Sum_probs=51.6
Q ss_pred eeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEeecCCcccccc
Q 047247 184 KLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVITGLNRLVELT 263 (386)
Q Consensus 184 ~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v~~~~~~e~l~ 263 (386)
.-+|+|+|.|.|. +...|+.+ | .++|||+.. ...++. |+.. ++|... +.+++.
T Consensus 42 ~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~s---~~~~~~--------a~~~---~~~~~~----d~~~~~ 94 (240)
T 3dli_A 42 CRRVLDIGCGRGE----FLELCKEE--G---IESIGVDIN---EDMIKF--------CEGK---FNVVKS----DAIEYL 94 (240)
T ss_dssp CSCEEEETCTTTH----HHHHHHHH--T---CCEEEECSC---HHHHHH--------HHTT---SEEECS----CHHHHH
T ss_pred CCeEEEEeCCCCH----HHHHHHhC--C---CcEEEEECC---HHHHHH--------HHhh---cceeec----cHHHHh
Confidence 3579999999875 34455554 2 368999852 223332 3322 333322 232221
Q ss_pred ccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEe
Q 047247 264 KGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIV 309 (386)
Q Consensus 264 ~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlv 309 (386)
. ...++..=+|-|...|||+.......+|+.+ +.|+|.-.+++
T Consensus 95 ~---~~~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 138 (240)
T 3dli_A 95 K---SLPDKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVI 138 (240)
T ss_dssp H---TSCTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEE
T ss_pred h---hcCCCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEE
Confidence 0 1122222233345668888755556777766 56899755544
No 90
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=78.97 E-value=18 Score=29.83 Aligned_cols=109 Identities=11% Similarity=0.076 Sum_probs=57.8
Q ss_pred HHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEe
Q 047247 174 AILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVI 253 (386)
Q Consensus 174 aILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v 253 (386)
.+++.+.-...-+|+|+|.|.| .+...|+.+. |..++|||+.. ...++.+.++ ++..|++-.+ .+
T Consensus 16 ~~~~~~~~~~~~~vldiG~G~G----~~~~~l~~~~---~~~~v~~vD~~---~~~~~~a~~~----~~~~~~~~~~-~~ 80 (178)
T 3hm2_A 16 LAISALAPKPHETLWDIGGGSG----SIAIEWLRST---PQTTAVCFEIS---EERRERILSN----AINLGVSDRI-AV 80 (178)
T ss_dssp HHHHHHCCCTTEEEEEESTTTT----HHHHHHHTTS---SSEEEEEECSC---HHHHHHHHHH----HHTTTCTTSE-EE
T ss_pred HHHHHhcccCCCeEEEeCCCCC----HHHHHHHHHC---CCCeEEEEeCC---HHHHHHHHHH----HHHhCCCCCE-EE
Confidence 4455555556678999999987 4555566654 45899999952 2344444333 3455665223 23
Q ss_pred ecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEe
Q 047247 254 TGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIV 309 (386)
Q Consensus 254 ~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlv 309 (386)
.. +..+.+... ...=+.++++ +.+|+ ..+|+.+ +.|+|.-.+++
T Consensus 81 ~~-d~~~~~~~~---~~~~D~i~~~--~~~~~------~~~l~~~~~~L~~gG~l~~ 125 (178)
T 3hm2_A 81 QQ-GAPRAFDDV---PDNPDVIFIG--GGLTA------PGVFAAAWKRLPVGGRLVA 125 (178)
T ss_dssp EC-CTTGGGGGC---CSCCSEEEEC--C-TTC------TTHHHHHHHTCCTTCEEEE
T ss_pred ec-chHhhhhcc---CCCCCEEEEC--CcccH------HHHHHHHHHhcCCCCEEEE
Confidence 22 112222210 0222455544 33454 3455554 56899866655
No 91
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=78.75 E-value=5.5 Score=36.08 Aligned_cols=110 Identities=16% Similarity=0.090 Sum_probs=58.4
Q ss_pred HHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEE
Q 047247 173 GAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKV 252 (386)
Q Consensus 173 qaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~ 252 (386)
..|++.+.-.+.-.|+|+|.|.|. +...|+. |..++|||+... ..+ +.|+... ..+|..
T Consensus 24 ~~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~-----~~~~v~gvD~s~---~~~--------~~a~~~~-~~~~~~ 82 (261)
T 3ege_A 24 NAIINLLNLPKGSVIADIGAGTGG----YSVALAN-----QGLFVYAVEPSI---VMR--------QQAVVHP-QVEWFT 82 (261)
T ss_dssp HHHHHHHCCCTTCEEEEETCTTSH----HHHHHHT-----TTCEEEEECSCH---HHH--------HSSCCCT-TEEEEC
T ss_pred HHHHHHhCCCCCCEEEEEcCcccH----HHHHHHh-----CCCEEEEEeCCH---HHH--------HHHHhcc-CCEEEE
Confidence 345555654556689999999986 3344444 236999999521 222 2222221 344432
Q ss_pred eecCCccccccccccccCCCceEEEeecccccccccchHHHHHHH-HHhcCCcE-EEEeeecCCC
Q 047247 253 ITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQM-FQSLKPKV-VTIVEEEADL 315 (386)
Q Consensus 253 v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~-ir~L~P~v-vvlvE~ea~~ 315 (386)
- +++++. ..++..=+|-|...|||+ .++. .+|+. .+.|+ .- +++++...+.
T Consensus 83 ~----d~~~~~-----~~~~~fD~v~~~~~l~~~-~~~~-~~l~~~~~~Lk-gG~~~~~~~~~~~ 135 (261)
T 3ege_A 83 G----YAENLA-----LPDKSVDGVISILAIHHF-SHLE-KSFQEMQRIIR-DGTIVLLTFDIRL 135 (261)
T ss_dssp C----CTTSCC-----SCTTCBSEEEEESCGGGC-SSHH-HHHHHHHHHBC-SSCEEEEEECGGG
T ss_pred C----chhhCC-----CCCCCEeEEEEcchHhhc-cCHH-HHHHHHHHHhC-CcEEEEEEcCCch
Confidence 2 344433 222322234445558887 3444 44544 46678 63 6666665443
No 92
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=78.57 E-value=13 Score=35.84 Aligned_cols=117 Identities=13% Similarity=0.064 Sum_probs=63.3
Q ss_pred eeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHc-CCceEEEEeecCCccccc
Q 047247 184 KLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLM-GVPFEFKVITGLNRLVEL 262 (386)
Q Consensus 184 ~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~l-gipFeF~~v~~~~~~e~l 262 (386)
.-+|+|+|.|.|. +...|+.++ |.-+||+|+. +...++.+.+++.+++..+ +-.++|..- ++.+.
T Consensus 121 ~~~VLdIG~G~G~----~a~~la~~~---~~~~V~~VDi---s~~~l~~Ar~~~~~~~~gl~~~rv~~~~~----D~~~~ 186 (334)
T 1xj5_A 121 PKKVLVIGGGDGG----VLREVARHA---SIEQIDMCEI---DKMVVDVSKQFFPDVAIGYEDPRVNLVIG----DGVAF 186 (334)
T ss_dssp CCEEEEETCSSSH----HHHHHTTCT---TCCEEEEEES---CHHHHHHHHHHCHHHHGGGGSTTEEEEES----CHHHH
T ss_pred CCEEEEECCCccH----HHHHHHHcC---CCCEEEEEEC---CHHHHHHHHHHHHhhccccCCCcEEEEEC----CHHHH
Confidence 3589999999985 556666653 4579999995 3345655666665554333 123444332 22221
Q ss_pred cccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEeeecCCC
Q 047247 263 TKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIVEEEADL 315 (386)
Q Consensus 263 ~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlvE~ea~~ 315 (386)
-.. +.-..=+.|++|+....+....-....+++.+ +.|+|.-++++..+.-.
T Consensus 187 l~~-~~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~ 239 (334)
T 1xj5_A 187 LKN-AAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLW 239 (334)
T ss_dssp HHT-SCTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCTT
T ss_pred HHh-ccCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCCcc
Confidence 100 10011257777765333321111124566665 66899998888644433
No 93
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=78.46 E-value=35 Score=32.25 Aligned_cols=144 Identities=11% Similarity=0.110 Sum_probs=76.3
Q ss_pred HHHHHHHHhcCchHHHHHHHHHHHHHhhc----CCC-ceeEEeeccCCCCCC--hHHHHHHHhcCCCCCCeeEEEEeccc
Q 047247 151 RKLILKFQEVSPWTTFGHVASNGAILEAL----DGE-TKLHIIDMSNTLCTQ--WPTLLEALATRNDETPHLKLTVVVTV 223 (386)
Q Consensus 151 ~~~~~~f~~~~P~~kfa~~tANqaILeA~----~g~-~~VHIIDf~i~~G~Q--WpsLiqaLA~R~~gpP~LRIT~I~~~ 223 (386)
+++-..+....|.+.- ..-+|.+.|.-+ .++ ..=+|+|+|.|.|.. --.+.+.++ |..|||+|+..
T Consensus 42 r~~~~~~~~~~P~~~~-~a~~nr~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~------P~arVv~VD~s 114 (277)
T 3giw_A 42 KEAGDAMSREWPALPV-HMRANRDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVA------PESRVVYVDND 114 (277)
T ss_dssp HHHHHHHHHHCTTHHH-HHHHHHHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHC------TTCEEEEEECC
T ss_pred HHHHHHHHHhCCCHHH-HHHHHHHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHC------CCCEEEEEeCC
Confidence 3444456678888742 234676665542 222 223799999997552 223333331 34799999952
Q ss_pred cchHHHHHHHHHHHHHHHHHcCCceEEEEeecCCccccccc----c--ccccCCCceEEEeecccccccccch-HHHHH-
Q 047247 224 SLVRLVMKEIGQRMEKFARLMGVPFEFKVITGLNRLVELTK----G--TLGVKEDEAVAVNCIGALRRVAVEE-RGAVI- 295 (386)
Q Consensus 224 ~~~~~~l~etg~rL~~fA~~lgipFeF~~v~~~~~~e~l~~----~--~L~~~~~EaLaVN~~~~Lh~l~~~~-r~~vL- 295 (386)
...|+....+|.+. -.-..+|... ++.++.. . .=.++.++.++|-+...||++.... ...+|
T Consensus 115 ---p~mLa~Ar~~l~~~---~~~~~~~v~a----D~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~ 184 (277)
T 3giw_A 115 ---PIVLTLSQGLLAST---PEGRTAYVEA----DMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVR 184 (277)
T ss_dssp ---HHHHHTTHHHHCCC---SSSEEEEEEC----CTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHH
T ss_pred ---hHHHHHHHHHhccC---CCCcEEEEEe----cccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHH
Confidence 23444444444321 0112444443 3443321 0 0013445666677777899998543 24555
Q ss_pred HHHHhcCCcEE-EEeee
Q 047247 296 QMFQSLKPKVV-TIVEE 311 (386)
Q Consensus 296 ~~ir~L~P~vv-vlvE~ 311 (386)
+..+.|+|.-+ ++++-
T Consensus 185 ~l~~~L~PGG~Lvls~~ 201 (277)
T 3giw_A 185 RLLEPLPSGSYLAMSIG 201 (277)
T ss_dssp HHHTTSCTTCEEEEEEE
T ss_pred HHHHhCCCCcEEEEEec
Confidence 45567899854 44444
No 94
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=78.40 E-value=17 Score=33.31 Aligned_cols=105 Identities=10% Similarity=0.054 Sum_probs=57.4
Q ss_pred ceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHH-H------H-H------HcCCce
Q 047247 183 TKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEK-F------A-R------LMGVPF 248 (386)
Q Consensus 183 ~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~-f------A-~------~lgipF 248 (386)
+.-.|+|+|.|.|. +...||.+ | .++|||+.. ...++.+.++... + + . ..+...
T Consensus 68 ~~~~vLD~GCG~G~----~~~~La~~--G---~~V~gvD~S---~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 135 (252)
T 2gb4_A 68 SGLRVFFPLCGKAI----EMKWFADR--G---HTVVGVEIS---EIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSI 135 (252)
T ss_dssp CSCEEEETTCTTCT----HHHHHHHT--T---CEEEEECSC---HHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSE
T ss_pred CCCeEEEeCCCCcH----HHHHHHHC--C---CeEEEEECC---HHHHHHHHHhcccccccccccccccccccccCCCce
Confidence 44589999999985 34567776 3 489999952 2234332221100 0 0 0 011233
Q ss_pred EEEEeecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEE
Q 047247 249 EFKVITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVT 307 (386)
Q Consensus 249 eF~~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvv 307 (386)
+|..- ++.++.+.. .+..=+|-+...|+++....+..+++.+ +-|+|.-.+
T Consensus 136 ~~~~~----D~~~l~~~~----~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l 187 (252)
T 2gb4_A 136 SLYCC----SIFDLPRAN----IGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQY 187 (252)
T ss_dssp EEEES----CTTTGGGGC----CCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEE
T ss_pred EEEEC----ccccCCccc----CCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEE
Confidence 33322 344444321 1333344455678888766677888877 458998655
No 95
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=78.39 E-value=15 Score=32.06 Aligned_cols=103 Identities=8% Similarity=-0.033 Sum_probs=54.1
Q ss_pred ceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHH----------HcCCceEEEE
Q 047247 183 TKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFAR----------LMGVPFEFKV 252 (386)
Q Consensus 183 ~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~----------~lgipFeF~~ 252 (386)
+.-+|+|+|.|.|. +...|+.+ | .++|||+.. ...++.+.++... .. -.+-..+|..
T Consensus 22 ~~~~vLD~GCG~G~----~~~~la~~--g---~~V~gvD~S---~~~l~~a~~~~~~-~~~~~~~~~~~~~~~~~v~~~~ 88 (203)
T 1pjz_A 22 PGARVLVPLCGKSQ----DMSWLSGQ--G---YHVVGAELS---EAAVERYFTERGE-QPHITSQGDFKVYAAPGIEIWC 88 (203)
T ss_dssp TTCEEEETTTCCSH----HHHHHHHH--C---CEEEEEEEC---HHHHHHHHHHHCS-CSEEEEETTEEEEECSSSEEEE
T ss_pred CCCEEEEeCCCCcH----hHHHHHHC--C---CeEEEEeCC---HHHHHHHHHHccC-CcccccccccccccCCccEEEE
Confidence 34479999999884 33446665 3 489999952 2344443332110 00 0012233433
Q ss_pred eecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEE
Q 047247 253 ITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVV 306 (386)
Q Consensus 253 v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vv 306 (386)
- ++.++.... .+..=+|-+...||++....+..+++.+ |-|+|.-.
T Consensus 89 ~----d~~~l~~~~----~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~ 135 (203)
T 1pjz_A 89 G----DFFALTARD----IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACS 135 (203)
T ss_dssp E----CCSSSTHHH----HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEE
T ss_pred C----ccccCCccc----CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcE
Confidence 2 244433211 0222234455568888655677788766 55899854
No 96
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=78.35 E-value=2.8 Score=40.06 Aligned_cols=112 Identities=9% Similarity=0.035 Sum_probs=63.6
Q ss_pred HHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCC--ceEE
Q 047247 173 GAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGV--PFEF 250 (386)
Q Consensus 173 qaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgi--pFeF 250 (386)
..|++.+.-.+.-+|+|+|.|.|. +...|+.+. |.+++|+++.+. .+. .+.++..++ ..+|
T Consensus 174 ~~~~~~~~~~~~~~vLDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~~----~~~------~~~~~~~~~~~~v~~ 236 (348)
T 3lst_A 174 LILARAGDFPATGTVADVGGGRGG----FLLTVLREH---PGLQGVLLDRAE----VVA------RHRLDAPDVAGRWKV 236 (348)
T ss_dssp HHHHHHSCCCSSEEEEEETCTTSH----HHHHHHHHC---TTEEEEEEECHH----HHT------TCCCCCGGGTTSEEE
T ss_pred HHHHHhCCccCCceEEEECCccCH----HHHHHHHHC---CCCEEEEecCHH----Hhh------cccccccCCCCCeEE
Confidence 467787766667899999999985 444454443 468999998531 221 111122233 2555
Q ss_pred EEeecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEE-EeeecC
Q 047247 251 KVITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVT-IVEEEA 313 (386)
Q Consensus 251 ~~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvv-lvE~ea 313 (386)
..- ++.+ .+. .-+++ -+...||++.......+|+.+ +.|+|.-.+ ++|.-.
T Consensus 237 ~~~----d~~~----~~p--~~D~v--~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~ 289 (348)
T 3lst_A 237 VEG----DFLR----EVP--HADVH--VLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVV 289 (348)
T ss_dssp EEC----CTTT----CCC--CCSEE--EEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCB
T ss_pred Eec----CCCC----CCC--CCcEE--EEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEecc
Confidence 443 2211 111 22344 344568988755556788877 557997544 445433
No 97
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=77.84 E-value=15 Score=31.66 Aligned_cols=106 Identities=13% Similarity=0.104 Sum_probs=58.2
Q ss_pred HHHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEE
Q 047247 172 NGAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFK 251 (386)
Q Consensus 172 NqaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~ 251 (386)
...|++.+. .+.-+|+|+|.|.| .+...|+.+ | .++|||+.. ...+ +.|+.... +|.
T Consensus 22 ~~~l~~~~~-~~~~~vLdiG~G~G----~~~~~l~~~--~---~~~~~~D~~---~~~~--------~~~~~~~~--~~~ 78 (230)
T 3cc8_A 22 NPNLLKHIK-KEWKEVLDIGCSSG----ALGAAIKEN--G---TRVSGIEAF---PEAA--------EQAKEKLD--HVV 78 (230)
T ss_dssp CHHHHTTCC-TTCSEEEEETCTTS----HHHHHHHTT--T---CEEEEEESS---HHHH--------HHHHTTSS--EEE
T ss_pred HHHHHHHhc-cCCCcEEEeCCCCC----HHHHHHHhc--C---CeEEEEeCC---HHHH--------HHHHHhCC--cEE
Confidence 345666665 55668999999987 455667776 2 689999852 2223 23332222 232
Q ss_pred EeecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEe
Q 047247 252 VITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIV 309 (386)
Q Consensus 252 ~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlv 309 (386)
.. +++++. +...++..=+|-|...|||+. ++ ..+|+.+ +.|+|.-.+++
T Consensus 79 ~~----d~~~~~---~~~~~~~fD~v~~~~~l~~~~-~~-~~~l~~~~~~L~~gG~l~~ 128 (230)
T 3cc8_A 79 LG----DIETMD---MPYEEEQFDCVIFGDVLEHLF-DP-WAVIEKVKPYIKQNGVILA 128 (230)
T ss_dssp ES----CTTTCC---CCSCTTCEEEEEEESCGGGSS-CH-HHHHHHTGGGEEEEEEEEE
T ss_pred Ec----chhhcC---CCCCCCccCEEEECChhhhcC-CH-HHHHHHHHHHcCCCCEEEE
Confidence 21 333321 122233322333455678875 33 4666666 55799855554
No 98
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=75.67 E-value=6.9 Score=37.61 Aligned_cols=103 Identities=12% Similarity=0.061 Sum_probs=60.2
Q ss_pred eEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc--eEEEEeecCCccccc
Q 047247 185 LHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP--FEFKVITGLNRLVEL 262 (386)
Q Consensus 185 VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip--FeF~~v~~~~~~e~l 262 (386)
-.|+|+|.|.|. +...|+.+ +.-+++||+.. +.++.+ .+.++..|++ .+|..- +++++
T Consensus 68 ~~VLDvGcG~G~----~~~~la~~----g~~~v~gvD~s----~~l~~a----~~~~~~~~~~~~v~~~~~----d~~~~ 127 (349)
T 3q7e_A 68 KVVLDVGSGTGI----LCMFAAKA----GARKVIGIECS----SISDYA----VKIVKANKLDHVVTIIKG----KVEEV 127 (349)
T ss_dssp CEEEEESCTTSH----HHHHHHHT----TCSEEEEEECS----THHHHH----HHHHHHTTCTTTEEEEES----CTTTC
T ss_pred CEEEEEeccchH----HHHHHHHC----CCCEEEEECcH----HHHHHH----HHHHHHcCCCCcEEEEEC----cHHHc
Confidence 469999999984 45556666 23699999963 233333 3345556766 554432 45555
Q ss_pred cccccccCCCceEEEeecc-cccccccchHHHHHHHH-HhcCCcEEEEeeec
Q 047247 263 TKGTLGVKEDEAVAVNCIG-ALRRVAVEERGAVIQMF-QSLKPKVVTIVEEE 312 (386)
Q Consensus 263 ~~~~L~~~~~EaLaVN~~~-~Lh~l~~~~r~~vL~~i-r~L~P~vvvlvE~e 312 (386)
... -..=+.|+.+++. .+++ ....+.+|+.+ |-|+|.-+++.+..
T Consensus 128 ~~~---~~~fD~Iis~~~~~~l~~--~~~~~~~l~~~~r~LkpgG~li~~~~ 174 (349)
T 3q7e_A 128 ELP---VEKVDIIISEWMGYCLFY--ESMLNTVLHARDKWLAPDGLIFPDRA 174 (349)
T ss_dssp CCS---SSCEEEEEECCCBBTBTB--TCCHHHHHHHHHHHEEEEEEEESCEE
T ss_pred cCC---CCceEEEEEccccccccC--chhHHHHHHHHHHhCCCCCEEccccc
Confidence 321 1112455555542 2332 34567788877 77999988875443
No 99
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=75.56 E-value=28 Score=28.87 Aligned_cols=99 Identities=10% Similarity=0.036 Sum_probs=52.5
Q ss_pred ceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEeecCCccccc
Q 047247 183 TKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVITGLNRLVEL 262 (386)
Q Consensus 183 ~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v~~~~~~e~l 262 (386)
+.-+|+|+|.|.|. +...|+.+ + .++|||+.. ...++.+.+++ -..+|... ++.++
T Consensus 46 ~~~~vLdiG~G~G~----~~~~l~~~--~---~~v~~~D~~---~~~~~~a~~~~--------~~~~~~~~----d~~~~ 101 (195)
T 3cgg_A 46 RGAKILDAGCGQGR----IGGYLSKQ--G---HDVLGTDLD---PILIDYAKQDF--------PEARWVVG----DLSVD 101 (195)
T ss_dssp TTCEEEEETCTTTH----HHHHHHHT--T---CEEEEEESC---HHHHHHHHHHC--------TTSEEEEC----CTTTS
T ss_pred CCCeEEEECCCCCH----HHHHHHHC--C---CcEEEEcCC---HHHHHHHHHhC--------CCCcEEEc----ccccC
Confidence 34489999999875 44455555 2 389999852 22343333332 12333332 23333
Q ss_pred cccccccCCC--ceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEeee
Q 047247 263 TKGTLGVKED--EAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIVEE 311 (386)
Q Consensus 263 ~~~~L~~~~~--EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlvE~ 311 (386)
. ..++ +.|+.+ ...+|++.......+|+.+ +.|+|.-.+++..
T Consensus 102 ~-----~~~~~~D~i~~~-~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~ 147 (195)
T 3cgg_A 102 Q-----ISETDFDLIVSA-GNVMGFLAEDGREPALANIHRALGADGRAVIGF 147 (195)
T ss_dssp C-----CCCCCEEEEEEC-CCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred C-----CCCCceeEEEEC-CcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 2 2222 333332 2346666544456666665 5679987766643
No 100
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=75.54 E-value=7.3 Score=39.55 Aligned_cols=113 Identities=12% Similarity=0.014 Sum_probs=63.1
Q ss_pred HHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc--eEE
Q 047247 173 GAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP--FEF 250 (386)
Q Consensus 173 qaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip--FeF 250 (386)
.+|++.+...+.-+|+|+|.|.|. +...|+.++ ..+|+||+. + ..++. ..+.++..|+. .+|
T Consensus 148 ~~il~~l~~~~~~~VLDiGcGtG~----la~~la~~~----~~~V~gvD~---s-~~l~~----A~~~~~~~gl~~~v~~ 211 (480)
T 3b3j_A 148 RAILQNHTDFKDKIVLDVGCGSGI----LSFFAAQAG----ARKIYAVEA---S-TMAQH----AEVLVKSNNLTDRIVV 211 (480)
T ss_dssp HHHHHTGGGTTTCEEEEESCSTTH----HHHHHHHTT----CSEEEEEEC---H-HHHHH----HHHHHHHTTCTTTEEE
T ss_pred HHHHHhhhhcCCCEEEEecCcccH----HHHHHHHcC----CCEEEEEEc---H-HHHHH----HHHHHHHcCCCCcEEE
Confidence 466776654455689999999985 444666652 369999994 2 23322 23344556764 444
Q ss_pred EEeecCCccccccccccccCCCceEEEeecccccccccc-hHHHHHHHHHhcCCcEEEEeee
Q 047247 251 KVITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVE-ERGAVIQMFQSLKPKVVTIVEE 311 (386)
Q Consensus 251 ~~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~-~r~~vL~~ir~L~P~vvvlvE~ 311 (386)
..- +++++... ..=+.|+.|.+ ++++... ..+.+...-+-|+|.-+++.+.
T Consensus 212 ~~~----d~~~~~~~----~~fD~Ivs~~~--~~~~~~e~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 212 IPG----KVEEVSLP----EQVDIIISEPM--GYMLFNERMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp EES----CTTTCCCS----SCEEEEECCCC--HHHHTCHHHHHHHHHGGGGEEEEEEEESCE
T ss_pred EEC----chhhCccC----CCeEEEEEeCc--hHhcCcHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 432 45554311 11134444433 4544422 3444444457789998887643
No 101
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=74.65 E-value=5.4 Score=38.54 Aligned_cols=109 Identities=13% Similarity=0.087 Sum_probs=63.0
Q ss_pred HHHHhhcC-CCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEE
Q 047247 173 GAILEALD-GETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFK 251 (386)
Q Consensus 173 qaILeA~~-g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~ 251 (386)
..|++.+. -...-+|+|+|.|.|. +...|+.+. |.+++|+++.|. .++. |+.. -..+|.
T Consensus 190 ~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~~----~~~~--------a~~~-~~v~~~ 249 (364)
T 3p9c_A 190 KKLLELYHGFEGLGTLVDVGGGVGA----TVAAIAAHY---PTIKGVNFDLPH----VISE--------APQF-PGVTHV 249 (364)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEECHH----HHTT--------CCCC-TTEEEE
T ss_pred HHHHHhcccccCCCEEEEeCCCCCH----HHHHHHHHC---CCCeEEEecCHH----HHHh--------hhhc-CCeEEE
Confidence 45777776 3456799999999985 444454443 568999998632 2221 2211 124444
Q ss_pred EeecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEE-EEeeecC
Q 047247 252 VITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVV-TIVEEEA 313 (386)
Q Consensus 252 ~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vv-vlvE~ea 313 (386)
.- ++.+ + + ..+++++ +...||++.......+|+.+ +.|+|.-. +++|.-.
T Consensus 250 ~~----D~~~--~--~--p~~D~v~--~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~ 301 (364)
T 3p9c_A 250 GG----DMFK--E--V--PSGDTIL--MKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCIL 301 (364)
T ss_dssp EC----CTTT--C--C--CCCSEEE--EESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCB
T ss_pred eC----CcCC--C--C--CCCCEEE--ehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 33 2332 1 1 1234443 44568988765566788877 55899754 4555443
No 102
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=74.47 E-value=14 Score=31.16 Aligned_cols=102 Identities=15% Similarity=0.012 Sum_probs=50.9
Q ss_pred EEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCC-ceEEEEeecCCccccccc
Q 047247 186 HIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGV-PFEFKVITGLNRLVELTK 264 (386)
Q Consensus 186 HIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgi-pFeF~~v~~~~~~e~l~~ 264 (386)
+|+|+|.|.|. +...|+.+ .-+||||+. +...++.+.+++ +..|+ ..+|.. . ..+++..
T Consensus 25 ~vLDiGcG~G~----~~~~la~~-----~~~v~~vD~---s~~~l~~a~~~~----~~~~~~~v~~~~-~---~~~~l~~ 84 (185)
T 3mti_A 25 IVVDATMGNGN----DTAFLAGL-----SKKVYAFDV---QEQALGKTSQRL----SDLGIENTELIL-D---GHENLDH 84 (185)
T ss_dssp EEEESCCTTSH----HHHHHHTT-----SSEEEEEES---CHHHHHHHHHHH----HHHTCCCEEEEE-S---CGGGGGG
T ss_pred EEEEEcCCCCH----HHHHHHHh-----CCEEEEEEC---CHHHHHHHHHHH----HHcCCCcEEEEe-C---cHHHHHh
Confidence 68999999985 33446666 258999995 233454444443 34455 245544 1 3444321
Q ss_pred cccccCCCceEEEeecccccc----cc--cchHHHHHHH-HHhcCCcEEEEee
Q 047247 265 GTLGVKEDEAVAVNCIGALRR----VA--VEERGAVIQM-FQSLKPKVVTIVE 310 (386)
Q Consensus 265 ~~L~~~~~EaLaVN~~~~Lh~----l~--~~~r~~vL~~-ir~L~P~vvvlvE 310 (386)
. .-..=+.++.|..+ +++ +. ......+|+. .+-|+|.-.+++-
T Consensus 85 ~--~~~~fD~v~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 134 (185)
T 3mti_A 85 Y--VREPIRAAIFNLGY-LPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIM 134 (185)
T ss_dssp T--CCSCEEEEEEEEC------------CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred h--ccCCcCEEEEeCCC-CCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEE
Confidence 1 00112455555422 222 11 1223344444 4779998766553
No 103
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=74.12 E-value=5.9 Score=37.77 Aligned_cols=99 Identities=14% Similarity=0.102 Sum_probs=54.8
Q ss_pred ceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEeecCCccccc
Q 047247 183 TKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVITGLNRLVEL 262 (386)
Q Consensus 183 ~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v~~~~~~e~l 262 (386)
+.-+|+|+|.|.|. +...|+.+. |.+++|+++.+ ..++ .|+... ..+|..- ++.+
T Consensus 188 ~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~----~~~~--------~a~~~~-~v~~~~~----d~~~- 242 (352)
T 1fp2_A 188 GLESIVDVGGGTGT----TAKIICETF---PKLKCIVFDRP----QVVE--------NLSGSN-NLTYVGG----DMFT- 242 (352)
T ss_dssp TCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEECH----HHHT--------TCCCBT-TEEEEEC----CTTT-
T ss_pred cCceEEEeCCCccH----HHHHHHHHC---CCCeEEEeeCH----HHHh--------hcccCC-CcEEEec----cccC-
Confidence 34689999999984 555566553 45799999952 1222 122221 1444432 2221
Q ss_pred cccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCC---c-EEEEeeecC
Q 047247 263 TKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKP---K-VVTIVEEEA 313 (386)
Q Consensus 263 ~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P---~-vvvlvE~ea 313 (386)
.+. .-++++ +...||++.......+|+.+ +.|+| . .++++|...
T Consensus 243 ---~~p--~~D~v~--~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~ 291 (352)
T 1fp2_A 243 ---SIP--NADAVL--LKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVI 291 (352)
T ss_dssp ---CCC--CCSEEE--EESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEE
T ss_pred ---CCC--CccEEE--eehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeec
Confidence 111 124433 55568988654445777776 45799 3 556666543
No 104
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=73.91 E-value=17 Score=33.13 Aligned_cols=44 Identities=14% Similarity=0.208 Sum_probs=27.1
Q ss_pred ceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHH
Q 047247 183 TKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRM 237 (386)
Q Consensus 183 ~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL 237 (386)
+.-.|+|+|.|.|. +..++. .++ + -+||||+.. ...++.+.+++
T Consensus 71 ~~~~vLDiGcG~G~-~~~l~~---~~~-~---~~v~gvD~s---~~~l~~a~~~~ 114 (289)
T 2g72_A 71 SGRTLIDIGSGPTV-YQLLSA---CSH-F---EDITMTDFL---EVNRQELGRWL 114 (289)
T ss_dssp CCSEEEEETCTTCC-GGGTTG---GGG-C---SEEEEECSC---HHHHHHHHHHH
T ss_pred CCCeEEEECCCcCh-HHHHhh---ccC-C---CeEEEeCCC---HHHHHHHHHHH
Confidence 44589999999998 543322 222 2 389999962 33455444443
No 105
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=73.88 E-value=23 Score=31.98 Aligned_cols=106 Identities=11% Similarity=0.000 Sum_probs=55.2
Q ss_pred eeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEeecCCcccccc
Q 047247 184 KLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVITGLNRLVELT 263 (386)
Q Consensus 184 ~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v~~~~~~e~l~ 263 (386)
.-.|+|+|.|.|.--.. |+.++ ..++|||+.. ...++.+.++ +...|+.-....+.. ++.++.
T Consensus 65 ~~~vLDiGcG~G~~~~~----l~~~~----~~~v~gvD~s---~~~~~~a~~~----~~~~~~~~~v~~~~~--d~~~~~ 127 (298)
T 1ri5_A 65 GDSVLDLGCGKGGDLLK----YERAG----IGEYYGVDIA---EVSINDARVR----ARNMKRRFKVFFRAQ--DSYGRH 127 (298)
T ss_dssp TCEEEEETCTTTTTHHH----HHHHT----CSEEEEEESC---HHHHHHHHHH----HHTSCCSSEEEEEES--CTTTSC
T ss_pred CCeEEEECCCCCHHHHH----HHHCC----CCEEEEEECC---HHHHHHHHHH----HHhcCCCccEEEEEC--Cccccc
Confidence 34799999999864333 44332 3489999952 2344444333 334455333333332 344332
Q ss_pred ccccccCCCceEEEeecccccccc--cchHHHHHHHH-HhcCCcEEEEee
Q 047247 264 KGTLGVKEDEAVAVNCIGALRRVA--VEERGAVIQMF-QSLKPKVVTIVE 310 (386)
Q Consensus 264 ~~~L~~~~~EaLaVN~~~~Lh~l~--~~~r~~vL~~i-r~L~P~vvvlvE 310 (386)
.. .++..=+|-|.+.||++. ......+|+.+ +.|+|.-.+++.
T Consensus 128 ~~----~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 173 (298)
T 1ri5_A 128 MD----LGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMT 173 (298)
T ss_dssp CC----CSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred cC----CCCCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 10 123222333445577742 22344566655 568998666553
No 106
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=73.43 E-value=21 Score=35.82 Aligned_cols=118 Identities=11% Similarity=0.068 Sum_probs=62.4
Q ss_pred HHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHH---HHHHHHHHHHcCCc--
Q 047247 173 GAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEI---GQRMEKFARLMGVP-- 247 (386)
Q Consensus 173 qaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~et---g~rL~~fA~~lgip-- 247 (386)
..|++.+.-...-.|+|+|.|.|.+-..|.+.. +..+++||+... ..++.+ -+.+.+-++.+|+.
T Consensus 232 ~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~-------g~~~V~GVDis~---~~l~~A~~Ml~~ar~~~~~~Gl~~~ 301 (433)
T 1u2z_A 232 SDVYQQCQLKKGDTFMDLGSGVGNCVVQAALEC-------GCALSFGCEIMD---DASDLTILQYEELKKRCKLYGMRLN 301 (433)
T ss_dssp HHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHH-------CCSEEEEEECCH---HHHHHHHHHHHHHHHHHHHTTBCCC
T ss_pred HHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHC-------CCCEEEEEeCCH---HHHHHHHHhHHHHHHHHHHcCCCCC
Confidence 346666665555679999999987655544432 134899998532 223322 23334455567743
Q ss_pred -eEEEEeecCCcccccccccc--ccCCCceEEEeecccccccccchHHHHHHHHHhcCCcEEEEe
Q 047247 248 -FEFKVITGLNRLVELTKGTL--GVKEDEAVAVNCIGALRRVAVEERGAVIQMFQSLKPKVVTIV 309 (386)
Q Consensus 248 -FeF~~v~~~~~~e~l~~~~L--~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~ir~L~P~vvvlv 309 (386)
++|.. + +.+.+ ...+ ...+=++|++|..+ +. ......+-...+.|+|.-.+++
T Consensus 302 nV~~i~--g-D~~~~--~~~~~~~~~~FDvIvvn~~l-~~---~d~~~~L~el~r~LKpGG~lVi 357 (433)
T 1u2z_A 302 NVEFSL--K-KSFVD--NNRVAELIPQCDVILVNNFL-FD---EDLNKKVEKILQTAKVGCKIIS 357 (433)
T ss_dssp CEEEEE--S-SCSTT--CHHHHHHGGGCSEEEECCTT-CC---HHHHHHHHHHHTTCCTTCEEEE
T ss_pred ceEEEE--c-Ccccc--ccccccccCCCCEEEEeCcc-cc---ccHHHHHHHHHHhCCCCeEEEE
Confidence 44432 1 11211 0001 01223677777543 11 2333344456688999876665
No 107
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=73.41 E-value=31 Score=32.20 Aligned_cols=117 Identities=13% Similarity=0.139 Sum_probs=63.9
Q ss_pred ceeEEeeccCCCCCChHHHHHHHhcC-CCCCCeeEEEEeccccchHHHHHHHHHH--------------HHHHHH-----
Q 047247 183 TKLHIIDMSNTLCTQWPTLLEALATR-NDETPHLKLTVVVTVSLVRLVMKEIGQR--------------MEKFAR----- 242 (386)
Q Consensus 183 ~~VHIIDf~i~~G~QWpsLiqaLA~R-~~gpP~LRIT~I~~~~~~~~~l~etg~r--------------L~~fA~----- 242 (386)
+.+.|.|.|.|.|----+|--.|++. +..+...+|+|++- +...|+.+.+. +.+|..
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDi---s~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~ 181 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDI---DTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGP 181 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEES---CHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTT
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEEC---CHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccC
Confidence 56999999999986443454455544 22222479999996 33355544432 222210
Q ss_pred ---HcC------CceEEEEeecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEee
Q 047247 243 ---LMG------VPFEFKVITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIVE 310 (386)
Q Consensus 243 ---~lg------ipFeF~~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlvE 310 (386)
... -..+|... ++.+.. +. ..+..=+|-|...|+++....+..+++.+ +.|+|.-+.+++
T Consensus 182 ~~~~~~v~~~lr~~V~F~~~----dl~~~~---~~-~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 182 HEGLVRVRQELANYVEFSSV----NLLEKQ---YN-VPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp SCSEEEECHHHHTTEEEEEC----CTTCSS---CC-CCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred CCCceeechhhcccCeEEec----ccCCCC---CC-cCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 000 01233322 122211 11 02445556666678887655556777766 568999888774
No 108
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=73.41 E-value=22 Score=30.52 Aligned_cols=109 Identities=12% Similarity=0.084 Sum_probs=58.2
Q ss_pred HHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc-eEEEE
Q 047247 174 AILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP-FEFKV 252 (386)
Q Consensus 174 aILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip-FeF~~ 252 (386)
.+++.+.-.+.-.|+|+|.|.|. +...|+.+. |..++|||+. +...++.+.++ ++..|++ ++|..
T Consensus 31 ~~l~~l~~~~~~~vLDiG~G~G~----~~~~la~~~---~~~~v~~vD~---s~~~~~~a~~~----~~~~~~~~v~~~~ 96 (204)
T 3e05_A 31 VTLSKLRLQDDLVMWDIGAGSAS----VSIEASNLM---PNGRIFALER---NPQYLGFIRDN----LKKFVARNVTLVE 96 (204)
T ss_dssp HHHHHTTCCTTCEEEEETCTTCH----HHHHHHHHC---TTSEEEEEEC---CHHHHHHHHHH----HHHHTCTTEEEEE
T ss_pred HHHHHcCCCCCCEEEEECCCCCH----HHHHHHHHC---CCCEEEEEeC---CHHHHHHHHHH----HHHhCCCcEEEEe
Confidence 45555555556689999999876 333444442 4579999995 23344444433 3445653 44433
Q ss_pred eecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEee
Q 047247 253 ITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIVE 310 (386)
Q Consensus 253 v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlvE 310 (386)
- ++.+.-.. ...=+.++++..+ + ....+|+.+ +.|+|.-.+++.
T Consensus 97 ~----d~~~~~~~---~~~~D~i~~~~~~--~-----~~~~~l~~~~~~LkpgG~l~~~ 141 (204)
T 3e05_A 97 A----FAPEGLDD---LPDPDRVFIGGSG--G-----MLEEIIDAVDRRLKSEGVIVLN 141 (204)
T ss_dssp C----CTTTTCTT---SCCCSEEEESCCT--T-----CHHHHHHHHHHHCCTTCEEEEE
T ss_pred C----Chhhhhhc---CCCCCEEEECCCC--c-----CHHHHHHHHHHhcCCCeEEEEE
Confidence 2 23211111 1122455555443 2 234555554 668998777763
No 109
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=73.27 E-value=10 Score=32.57 Aligned_cols=97 Identities=9% Similarity=0.018 Sum_probs=53.9
Q ss_pred eEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc-eEEEEeecCCcccccc
Q 047247 185 LHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP-FEFKVITGLNRLVELT 263 (386)
Q Consensus 185 VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip-FeF~~v~~~~~~e~l~ 263 (386)
-+|+|+|.|.|.--..|.+.+ |..++|||+.. ...++.+. +.++..|++ ++|... +++++.
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~~-------~~~~v~~vD~s---~~~~~~a~----~~~~~~~~~~v~~~~~----d~~~~~ 128 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIVR-------PEAHFTLLDSL---GKRVRFLR----QVQHELKLENIEPVQS----RVEEFP 128 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHHC-------TTSEEEEEESC---HHHHHHHH----HHHHHTTCSSEEEEEC----CTTTSC
T ss_pred CeEEEECCCCCHHHHHHHHHC-------CCCEEEEEeCC---HHHHHHHH----HHHHHcCCCCeEEEec----chhhCC
Confidence 379999999997655554432 34699999952 22343333 334456765 555433 344433
Q ss_pred ccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEeee
Q 047247 264 KGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIVEE 311 (386)
Q Consensus 264 ~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlvE~ 311 (386)
+. ..=+.|+.|. + .+...+|+.+ +.|+|.-+++++.
T Consensus 129 ~~----~~~D~i~~~~---~-----~~~~~~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 129 SE----PPFDGVISRA---F-----ASLNDMVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp CC----SCEEEEECSC---S-----SSHHHHHHHHTTSEEEEEEEEEEE
T ss_pred cc----CCcCEEEEec---c-----CCHHHHHHHHHHhcCCCcEEEEEe
Confidence 21 1113333322 1 2345667666 5579998777763
No 110
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=73.06 E-value=41 Score=30.78 Aligned_cols=91 Identities=11% Similarity=0.003 Sum_probs=51.6
Q ss_pred EEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEeecCCcccccccc
Q 047247 186 HIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVITGLNRLVELTKG 265 (386)
Q Consensus 186 HIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v~~~~~~e~l~~~ 265 (386)
.|+|+|.|.|. +...|+.+ + -++|||+.. ...++ .|+.. -.++|..- +.|++
T Consensus 42 ~vLDvGcGtG~----~~~~l~~~--~---~~v~gvD~s---~~ml~--------~a~~~-~~v~~~~~----~~e~~--- 93 (257)
T 4hg2_A 42 DALDCGCGSGQ----ASLGLAEF--F---ERVHAVDPG---EAQIR--------QALRH-PRVTYAVA----PAEDT--- 93 (257)
T ss_dssp EEEEESCTTTT----THHHHHTT--C---SEEEEEESC---HHHHH--------TCCCC-TTEEEEEC----CTTCC---
T ss_pred CEEEEcCCCCH----HHHHHHHh--C---CEEEEEeCc---HHhhh--------hhhhc-CCceeehh----hhhhh---
Confidence 58999999985 33455655 2 379999952 22222 23322 12333332 34444
Q ss_pred ccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEe
Q 047247 266 TLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIV 309 (386)
Q Consensus 266 ~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlv 309 (386)
.+.++..=+|-|...+|++. .+.+|+.+ |-|+|.-++++
T Consensus 94 --~~~~~sfD~v~~~~~~h~~~---~~~~~~e~~rvLkpgG~l~~ 133 (257)
T 4hg2_A 94 --GLPPASVDVAIAAQAMHWFD---LDRFWAELRRVARPGAVFAA 133 (257)
T ss_dssp --CCCSSCEEEEEECSCCTTCC---HHHHHHHHHHHEEEEEEEEE
T ss_pred --cccCCcccEEEEeeehhHhh---HHHHHHHHHHHcCCCCEEEE
Confidence 34445454566677788863 34566555 66899976544
No 111
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=72.90 E-value=8 Score=34.54 Aligned_cols=109 Identities=11% Similarity=0.087 Sum_probs=58.0
Q ss_pred ceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc-eEEEEeecCCcccc
Q 047247 183 TKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP-FEFKVITGLNRLVE 261 (386)
Q Consensus 183 ~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip-FeF~~v~~~~~~e~ 261 (386)
+.-.|+|+|.|.|.- ...||.+. |..+++||+. +...++.+. +-++..|+. ++| +.. +..+
T Consensus 34 ~~~~vLDiGcG~G~~----~~~lA~~~---p~~~v~giD~---s~~~l~~a~----~~~~~~~l~nv~~--~~~--Da~~ 95 (218)
T 3dxy_A 34 EAPVTLEIGFGMGAS----LVAMAKDR---PEQDFLGIEV---HSPGVGACL----ASAHEEGLSNLRV--MCH--DAVE 95 (218)
T ss_dssp CCCEEEEESCTTCHH----HHHHHHHC---TTSEEEEECS---CHHHHHHHH----HHHHHTTCSSEEE--ECS--CHHH
T ss_pred CCCeEEEEeeeChHH----HHHHHHHC---CCCeEEEEEe---cHHHHHHHH----HHHHHhCCCcEEE--EEC--CHHH
Confidence 445799999999853 34445442 4578999995 233444333 334556664 444 321 3333
Q ss_pred ccccccccCCC--ceEEEeecccccccccchH----HHHHHHH-HhcCCcEEEEeee
Q 047247 262 LTKGTLGVKED--EAVAVNCIGALRRVAVEER----GAVIQMF-QSLKPKVVTIVEE 311 (386)
Q Consensus 262 l~~~~L~~~~~--EaLaVN~~~~Lh~l~~~~r----~~vL~~i-r~L~P~vvvlvE~ 311 (386)
+-+..+ .++ +.|.+|+....++.....+ ..+|+.+ +.|+|.-++++.-
T Consensus 96 ~l~~~~--~~~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 96 VLHKMI--PDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp HHHHHS--CTTCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHc--CCCChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe
Confidence 211111 222 3556664433333221111 3578777 5599998887754
No 112
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=72.66 E-value=39 Score=29.34 Aligned_cols=105 Identities=12% Similarity=0.048 Sum_probs=58.2
Q ss_pred HHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc--eEEE
Q 047247 174 AILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP--FEFK 251 (386)
Q Consensus 174 aILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip--FeF~ 251 (386)
.+++.+.-.+.-.|+|+|.|.|. +...|+.+ + -++|||+. +...++.+. +.++..|++ ++|.
T Consensus 46 ~~l~~l~~~~~~~vLDlGcG~G~----~~~~la~~-~----~~v~~vD~---s~~~~~~a~----~~~~~~g~~~~v~~~ 109 (204)
T 3njr_A 46 LTLAALAPRRGELLWDIGGGSGS----VSVEWCLA-G----GRAITIEP---RADRIENIQ----KNIDTYGLSPRMRAV 109 (204)
T ss_dssp HHHHHHCCCTTCEEEEETCTTCH----HHHHHHHT-T----CEEEEEES---CHHHHHHHH----HHHHHTTCTTTEEEE
T ss_pred HHHHhcCCCCCCEEEEecCCCCH----HHHHHHHc-C----CEEEEEeC---CHHHHHHHH----HHHHHcCCCCCEEEE
Confidence 35555554455579999999874 34455665 2 58999995 223443333 345566776 5554
Q ss_pred EeecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEee
Q 047247 252 VITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIVE 310 (386)
Q Consensus 252 ~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlvE 310 (386)
.- +..+.-+. ...=++++++..+ + .+ +++.+ +.|+|.-.+++.
T Consensus 110 ~~----d~~~~~~~---~~~~D~v~~~~~~-------~-~~-~l~~~~~~LkpgG~lv~~ 153 (204)
T 3njr_A 110 QG----TAPAALAD---LPLPEAVFIGGGG-------S-QA-LYDRLWEWLAPGTRIVAN 153 (204)
T ss_dssp ES----CTTGGGTT---SCCCSEEEECSCC-------C-HH-HHHHHHHHSCTTCEEEEE
T ss_pred eC----chhhhccc---CCCCCEEEECCcc-------c-HH-HHHHHHHhcCCCcEEEEE
Confidence 32 23331111 1123566655422 2 33 66665 568998766663
No 113
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=72.01 E-value=19 Score=34.57 Aligned_cols=109 Identities=14% Similarity=0.086 Sum_probs=62.6
Q ss_pred HHHHhhcC-CCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEE
Q 047247 173 GAILEALD-GETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFK 251 (386)
Q Consensus 173 qaILeA~~-g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~ 251 (386)
..|++.+. -...-+|+|+|.|.|. +...|+.+. |.+++|+++.|. .++. |+.. -..+|.
T Consensus 192 ~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~~----~~~~--------a~~~-~~v~~~ 251 (368)
T 3reo_A 192 KKILEMYNGFEGLTTIVDVGGGTGA----VASMIVAKY---PSINAINFDLPH----VIQD--------APAF-SGVEHL 251 (368)
T ss_dssp HHHHTTCCTTTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEECHH----HHTT--------CCCC-TTEEEE
T ss_pred HHHHHhcccccCCCEEEEeCCCcCH----HHHHHHHhC---CCCEEEEEehHH----HHHh--------hhhc-CCCEEE
Confidence 45677765 3455799999999985 444555543 568999998521 2211 2211 124444
Q ss_pred EeecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcE-EEEeeecC
Q 047247 252 VITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKV-VTIVEEEA 313 (386)
Q Consensus 252 ~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~v-vvlvE~ea 313 (386)
.- ++.+ + + ..+++++ +...||++.......+|+.+ +.|+|.- ++++|.-.
T Consensus 252 ~~----d~~~--~--~--p~~D~v~--~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 303 (368)
T 3reo_A 252 GG----DMFD--G--V--PKGDAIF--IKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYIL 303 (368)
T ss_dssp EC----CTTT--C--C--CCCSEEE--EESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCC
T ss_pred ec----CCCC--C--C--CCCCEEE--EechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 32 2322 1 1 1235544 34458988765566788877 5689985 44556543
No 114
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=71.94 E-value=12 Score=35.56 Aligned_cols=103 Identities=11% Similarity=0.062 Sum_probs=55.2
Q ss_pred eEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEeecCCccccccc
Q 047247 185 LHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVITGLNRLVELTK 264 (386)
Q Consensus 185 VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v~~~~~~e~l~~ 264 (386)
-+|+|+|.|.|. +...++.++ .-+++||+.. + .++.+ .+.++..|+.=....+.. +++++..
T Consensus 40 ~~VLDiGcGtG~----ls~~la~~g----~~~v~~vD~s-~---~~~~a----~~~~~~~~~~~~i~~~~~--d~~~~~~ 101 (328)
T 1g6q_1 40 KIVLDVGCGTGI----LSMFAAKHG----AKHVIGVDMS-S---IIEMA----KELVELNGFSDKITLLRG--KLEDVHL 101 (328)
T ss_dssp CEEEEETCTTSH----HHHHHHHTC----CSEEEEEESS-T---HHHHH----HHHHHHTTCTTTEEEEES--CTTTSCC
T ss_pred CEEEEecCccHH----HHHHHHHCC----CCEEEEEChH-H---HHHHH----HHHHHHcCCCCCEEEEEC--chhhccC
Confidence 489999999984 344555552 2489999963 2 33333 233444565422233332 3554431
Q ss_pred cccccCCCceEEEeec-ccccccccchHHHHHHHH-HhcCCcEEEEee
Q 047247 265 GTLGVKEDEAVAVNCI-GALRRVAVEERGAVIQMF-QSLKPKVVTIVE 310 (386)
Q Consensus 265 ~~L~~~~~EaLaVN~~-~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlvE 310 (386)
. ...=+.|+.+.+ ..|++ ....+.+|..+ +-|+|.-+++.+
T Consensus 102 ~---~~~~D~Ivs~~~~~~l~~--~~~~~~~l~~~~~~LkpgG~li~~ 144 (328)
T 1g6q_1 102 P---FPKVDIIISEWMGYFLLY--ESMMDTVLYARDHYLVEGGLIFPD 144 (328)
T ss_dssp S---SSCEEEEEECCCBTTBST--TCCHHHHHHHHHHHEEEEEEEESC
T ss_pred C---CCcccEEEEeCchhhccc--HHHHHHHHHHHHhhcCCCeEEEEe
Confidence 1 111245555544 23332 23455677766 678999877643
No 115
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=71.58 E-value=18 Score=30.77 Aligned_cols=108 Identities=9% Similarity=-0.045 Sum_probs=52.6
Q ss_pred eEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEeecCCccccccc
Q 047247 185 LHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVITGLNRLVELTK 264 (386)
Q Consensus 185 VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v~~~~~~e~l~~ 264 (386)
-.|+|+|.|.|. +...|+.+-+ |.-++|||+. +...++.+.++ ++..|+.=.+..+.. +++++..
T Consensus 24 ~~vLDlGcG~G~----~~~~l~~~~~--~~~~v~~vD~---s~~~~~~a~~~----~~~~~~~~~v~~~~~--d~~~~~~ 88 (197)
T 3eey_A 24 DTVVDATCGNGN----DTAFLASLVG--ENGRVFGFDI---QDKAIANTTKK----LTDLNLIDRVTLIKD--GHQNMDK 88 (197)
T ss_dssp CEEEESCCTTSH----HHHHHHHHHC--TTCEEEEECS---CHHHHHHHHHH----HHHTTCGGGEEEECS--CGGGGGG
T ss_pred CEEEEcCCCCCH----HHHHHHHHhC--CCCEEEEEEC---CHHHHHHHHHH----HHHcCCCCCeEEEEC--CHHHHhh
Confidence 379999999983 3334444411 2249999995 22344444433 444566222333322 3444431
Q ss_pred cccccCCCceEEEeeccc---ccccccch--HHHHHHH-HHhcCCcEEEEe
Q 047247 265 GTLGVKEDEAVAVNCIGA---LRRVAVEE--RGAVIQM-FQSLKPKVVTIV 309 (386)
Q Consensus 265 ~~L~~~~~EaLaVN~~~~---Lh~l~~~~--r~~vL~~-ir~L~P~vvvlv 309 (386)
. +. ..=+.|+.|..+. -+++...+ ...+|+. .+.|+|.-.+++
T Consensus 89 ~-~~-~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~ 137 (197)
T 3eey_A 89 Y-ID-CPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITV 137 (197)
T ss_dssp T-CC-SCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred h-cc-CCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEE
Confidence 1 11 1225666676541 11121111 2235554 466899865554
No 116
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=69.72 E-value=10 Score=33.63 Aligned_cols=105 Identities=6% Similarity=-0.058 Sum_probs=53.9
Q ss_pred ceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEeecCCccccc
Q 047247 183 TKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVITGLNRLVEL 262 (386)
Q Consensus 183 ~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v~~~~~~e~l 262 (386)
..-+|+|+|.|.|. +...|+.+. + -++|||+.. ...++.+.+ .++..|...+|..- +++++
T Consensus 60 ~~~~vLDiGcGtG~----~~~~l~~~~---~-~~v~gvD~s---~~~l~~a~~----~~~~~~~~v~~~~~----d~~~~ 120 (236)
T 1zx0_A 60 KGGRVLEVGFGMAI----AASKVQEAP---I-DEHWIIECN---DGVFQRLRD----WAPRQTHKVIPLKG----LWEDV 120 (236)
T ss_dssp TCEEEEEECCTTSH----HHHHHHTSC---E-EEEEEEECC---HHHHHHHHH----HGGGCSSEEEEEES----CHHHH
T ss_pred CCCeEEEEeccCCH----HHHHHHhcC---C-CeEEEEcCC---HHHHHHHHH----HHHhcCCCeEEEec----CHHHh
Confidence 45689999999983 444455442 2 289999952 233433332 34445544444332 35544
Q ss_pred cccccccCCC--ceEEE-eecccccccccchHHHHHHHH-HhcCCcEEEEe
Q 047247 263 TKGTLGVKED--EAVAV-NCIGALRRVAVEERGAVIQMF-QSLKPKVVTIV 309 (386)
Q Consensus 263 ~~~~L~~~~~--EaLaV-N~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlv 309 (386)
.. ...++ +.|+. +.....+......++.+|+.+ |-|+|.-+++.
T Consensus 121 ~~---~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~ 168 (236)
T 1zx0_A 121 AP---TLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp GG---GSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEE
T ss_pred hc---ccCCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEE
Confidence 11 12222 34444 222223322223345666655 66899977764
No 117
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=69.67 E-value=20 Score=30.68 Aligned_cols=101 Identities=14% Similarity=0.028 Sum_probs=51.7
Q ss_pred HHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEee
Q 047247 175 ILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVIT 254 (386)
Q Consensus 175 ILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v~ 254 (386)
+++.+.. +.-.|+|+|.|.|. +...| + .-++|||+.. ...++.+.+++ -+ ++|...
T Consensus 29 ~l~~~~~-~~~~vLdiG~G~G~----~~~~l-----~--~~~v~~vD~s---~~~~~~a~~~~------~~--~~~~~~- 84 (211)
T 2gs9_A 29 ALKGLLP-PGESLLEVGAGTGY----WLRRL-----P--YPQKVGVEPS---EAMLAVGRRRA------PE--ATWVRA- 84 (211)
T ss_dssp HHHTTCC-CCSEEEEETCTTCH----HHHHC-----C--CSEEEEECCC---HHHHHHHHHHC------TT--SEEECC-
T ss_pred HHHHhcC-CCCeEEEECCCCCH----hHHhC-----C--CCeEEEEeCC---HHHHHHHHHhC------CC--cEEEEc-
Confidence 3444433 45589999999884 22333 1 1289999852 22343333332 12 333221
Q ss_pred cCCccccccccccccCCCceEEEeecccccccccchHHHHHHH-HHhcCCcEEEEe
Q 047247 255 GLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQM-FQSLKPKVVTIV 309 (386)
Q Consensus 255 ~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~-ir~L~P~vvvlv 309 (386)
+++++. ..++..=+|-|...|||+. ++ ..+|+. .+-|+|.-.+++
T Consensus 85 ---d~~~~~-----~~~~~fD~v~~~~~l~~~~-~~-~~~l~~~~~~L~pgG~l~i 130 (211)
T 2gs9_A 85 ---WGEALP-----FPGESFDVVLLFTTLEFVE-DV-ERVLLEARRVLRPGGALVV 130 (211)
T ss_dssp ---CTTSCC-----SCSSCEEEEEEESCTTTCS-CH-HHHHHHHHHHEEEEEEEEE
T ss_pred ---ccccCC-----CCCCcEEEEEEcChhhhcC-CH-HHHHHHHHHHcCCCCEEEE
Confidence 344332 2233222333456688875 44 445555 466899865554
No 118
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=69.34 E-value=22 Score=32.61 Aligned_cols=111 Identities=19% Similarity=0.166 Sum_probs=61.2
Q ss_pred HHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEE
Q 047247 173 GAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKV 252 (386)
Q Consensus 173 qaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~ 252 (386)
..|++++.-.+.-+|+|+|.|.|. |...|+.++ .-++|||+.. ...+ +.|+..+ .-.++.
T Consensus 21 ~~iv~~~~~~~~~~VLDiG~G~G~----lt~~L~~~~----~~~v~avEid---~~~~--------~~~~~~~-~~~v~~ 80 (249)
T 3ftd_A 21 KKIAEELNIEEGNTVVEVGGGTGN----LTKVLLQHP----LKKLYVIELD---REMV--------ENLKSIG-DERLEV 80 (249)
T ss_dssp HHHHHHTTCCTTCEEEEEESCHHH----HHHHHTTSC----CSEEEEECCC---HHHH--------HHHTTSC-CTTEEE
T ss_pred HHHHHhcCCCCcCEEEEEcCchHH----HHHHHHHcC----CCeEEEEECC---HHHH--------HHHHhcc-CCCeEE
Confidence 346666665555689999999864 778888872 3589999852 2222 2232221 112344
Q ss_pred eecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHHHh--cCCcEEEEeeecC
Q 047247 253 ITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMFQS--LKPKVVTIVEEEA 313 (386)
Q Consensus 253 v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~ir~--L~P~vvvlvE~ea 313 (386)
+.. +..+++...+. ..-.++-|..+.+. -+.+++.+.. .-+.+++++..|.
T Consensus 81 i~~--D~~~~~~~~~~--~~~~vv~NlPy~i~------~~il~~ll~~~~~~~~~~~m~Qkev 133 (249)
T 3ftd_A 81 INE--DASKFPFCSLG--KELKVVGNLPYNVA------SLIIENTVYNKDCVPLAVFMVQKEV 133 (249)
T ss_dssp ECS--CTTTCCGGGSC--SSEEEEEECCTTTH------HHHHHHHHHTGGGCSEEEEEEEHHH
T ss_pred EEc--chhhCChhHcc--CCcEEEEECchhcc------HHHHHHHHhcCCCCceEEEEEeHHH
Confidence 432 45555444321 12266777776432 2234555543 3467777776553
No 119
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=69.21 E-value=17 Score=30.36 Aligned_cols=108 Identities=15% Similarity=0.062 Sum_probs=57.7
Q ss_pred eeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEeecCCcccccc
Q 047247 184 KLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVITGLNRLVELT 263 (386)
Q Consensus 184 ~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v~~~~~~e~l~ 263 (386)
.-.|+|+|.|.|. +...|+.++ .-+++||+. +...++.+.+ .++..|++=....+.. ++.+..
T Consensus 32 ~~~vLDlGcG~G~----~~~~l~~~~----~~~v~~vD~---~~~~~~~a~~----~~~~~~~~~~~~~~~~--d~~~~~ 94 (177)
T 2esr_A 32 GGRVLDLFAGSGG----LAIEAVSRG----MSAAVLVEK---NRKAQAIIQD----NIIMTKAENRFTLLKM--EAERAI 94 (177)
T ss_dssp SCEEEEETCTTCH----HHHHHHHTT----CCEEEEECC---CHHHHHHHHH----HHHTTTCGGGEEEECS--CHHHHH
T ss_pred CCeEEEeCCCCCH----HHHHHHHcC----CCEEEEEEC---CHHHHHHHHH----HHHHcCCCCceEEEEC--cHHHhH
Confidence 3479999999884 333455552 358999995 2234443333 3445566522233322 343321
Q ss_pred ccccccCCCceEEEeecccccccccchHHHHHHHH---HhcCCcEEEEeeecCCC
Q 047247 264 KGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF---QSLKPKVVTIVEEEADL 315 (386)
Q Consensus 264 ~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i---r~L~P~vvvlvE~ea~~ 315 (386)
+. +. ..=+.|+.|..+.. ...+.+++.+ +-|+|.-+++++.....
T Consensus 95 ~~-~~-~~fD~i~~~~~~~~-----~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 95 DC-LT-GRFDLVFLDPPYAK-----ETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp HH-BC-SCEEEEEECCSSHH-----HHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred Hh-hc-CCCCEEEECCCCCc-----chHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 11 00 11246666655421 2234566666 67899988887665443
No 120
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=68.74 E-value=20 Score=34.25 Aligned_cols=114 Identities=13% Similarity=-0.001 Sum_probs=61.9
Q ss_pred HHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEE
Q 047247 173 GAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKV 252 (386)
Q Consensus 173 qaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~ 252 (386)
.+|++.+.-.+.-.|+|+|.|.|. +...++.+ | .-+++||+.. +.++.+.++ ++..|+.=....
T Consensus 54 ~~i~~~~~~~~~~~VLDiGcGtG~----ls~~la~~--g--~~~v~gvD~s----~~~~~a~~~----~~~~~~~~~i~~ 117 (340)
T 2fyt_A 54 DFIYQNPHIFKDKVVLDVGCGTGI----LSMFAAKA--G--AKKVLGVDQS----EILYQAMDI----IRLNKLEDTITL 117 (340)
T ss_dssp HHHHHCGGGTTTCEEEEETCTTSH----HHHHHHHT--T--CSEEEEEESS----THHHHHHHH----HHHTTCTTTEEE
T ss_pred HHHHhhhhhcCCCEEEEeeccCcH----HHHHHHHc--C--CCEEEEEChH----HHHHHHHHH----HHHcCCCCcEEE
Confidence 566665543444589999999984 44556665 2 2589999953 134333333 344555212223
Q ss_pred eecCCccccccccccccCCCceEEEeec-ccccccccchHHHHHHHH-HhcCCcEEEEe
Q 047247 253 ITGLNRLVELTKGTLGVKEDEAVAVNCI-GALRRVAVEERGAVIQMF-QSLKPKVVTIV 309 (386)
Q Consensus 253 v~~~~~~e~l~~~~L~~~~~EaLaVN~~-~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlv 309 (386)
+.. +++++... ...=++|+.|.+ +.+++ ....+.+|+.+ +-|+|.-+++.
T Consensus 118 ~~~--d~~~~~~~---~~~~D~Ivs~~~~~~l~~--~~~~~~~l~~~~~~LkpgG~lip 169 (340)
T 2fyt_A 118 IKG--KIEEVHLP---VEKVDVIISEWMGYFLLF--ESMLDSVLYAKNKYLAKGGSVYP 169 (340)
T ss_dssp EES--CTTTSCCS---CSCEEEEEECCCBTTBTT--TCHHHHHHHHHHHHEEEEEEEES
T ss_pred EEe--eHHHhcCC---CCcEEEEEEcCchhhccC--HHHHHHHHHHHHhhcCCCcEEEc
Confidence 332 34444211 111245665553 34444 23456677766 66899987763
No 121
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=67.84 E-value=13 Score=35.99 Aligned_cols=203 Identities=14% Similarity=0.074 Sum_probs=111.4
Q ss_pred CchHHHHHHHHHHHHHhh----cCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHH
Q 047247 161 SPWTTFGHVASNGAILEA----LDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQR 236 (386)
Q Consensus 161 ~P~~kfa~~tANqaILeA----~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~r 236 (386)
+|.+.-++.+=..+|-+. ++.....-||.+|.|...-.-.|... + |.+++--|+.|. +.+.+++
T Consensus 71 ~P~in~g~~~Rt~~iD~~v~~fl~~~~~~qVV~LGaGlDTr~~RL~~~------~-~~~~~~EvD~P~-----vi~~K~~ 138 (334)
T 1rjd_A 71 FPVMNYGTYLRTVGIDAAILEFLVANEKVQVVNLGCGSDLRMLPLLQM------F-PHLAYVDIDYNE-----SVELKNS 138 (334)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHCSSEEEEEETCTTCCTHHHHHHH------C-TTEEEEEEECHH-----HHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCCCCccHHHHhcCc------C-CCCEEEECCCHH-----HHHHHHH
Confidence 666666665555554443 33345688999999987654444332 1 357888888643 2223322
Q ss_pred HHHH----HHHcCC-------------ceEEEEeecCCccccccc-----cccccCCCceEEEeecccccccccchHHHH
Q 047247 237 MEKF----ARLMGV-------------PFEFKVITGLNRLVELTK-----GTLGVKEDEAVAVNCIGALRRVAVEERGAV 294 (386)
Q Consensus 237 L~~f----A~~lgi-------------pFeF~~v~~~~~~e~l~~-----~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~v 294 (386)
+..- .+.+|. +=.++.|.+ ++.+.+. ...+ +++...+|-+..-|+.+.....+.+
T Consensus 139 ~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~--DL~d~~w~~~ll~~~~-d~~~Ptl~iaEgvL~YL~~~~~~~l 215 (334)
T 1rjd_A 139 ILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAAC--DLNDITETTRLLDVCT-KREIPTIVISECLLCYMHNNESQLL 215 (334)
T ss_dssp HHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEEC--CTTCHHHHHHHHHTTC-CTTSCEEEEEESCGGGSCHHHHHHH
T ss_pred HhhhccchhhhcccccccccccccccCCCceEEEec--CCCCcHHHHHHHHhcC-CCCCCEEEEEcchhhCCCHHHHHHH
Confidence 2221 222332 123566643 4555422 2233 5677888889999999988888999
Q ss_pred HHHHHhcCCcEE-EEeeecCCCCCCccchHHHHHHHHHHHHHHHHHhhhcCCCC---CHHHHHHHhh--hccc-ccc---
Q 047247 295 IQMFQSLKPKVV-TIVEEEADLTSSRYDFVKCFEECLRFYTLYFEMLEESFVPT---SNERLMLERE--CSRD-IVR--- 364 (386)
Q Consensus 295 L~~ir~L~P~vv-vlvE~ea~~n~~~~~F~~RF~eaL~~YsalFDsLda~~~~~---s~eR~~iE~~--~g~e-I~n--- 364 (386)
|+.|.++-|... ++.|+-... .+...|..++...+ ... ....++.- .......+++ .|.. +.+
T Consensus 216 l~~ia~~~~~~~~v~~e~i~~~-~~~~~fg~~m~~~l---~~~---rg~~l~~~~~y~s~~~~~~rl~~~Gf~~a~d~~~ 288 (334)
T 1rjd_A 216 INTIMSKFSHGLWISYDPIGGS-QPNDRFGAIMQSNL---KES---RNLEMPTLMTYNSKEKYASRWSAAPNVIVNDMWE 288 (334)
T ss_dssp HHHHHHHCSSEEEEEEEECCCC-STTCCHHHHHHHHH---HHH---HCCCCTTTTTTCSHHHHHGGGTTSSEEEEEEHHH
T ss_pred HHHHHhhCCCcEEEEEeccCCC-CCcchHHHHHHHHh---hcc---cCCcccccccCCCHHHHHHHHHHCCCCcccCHHH
Confidence 999988767654 456764431 11124554433222 111 22222211 1223344444 4542 222
Q ss_pred ----ccccCCCCCccCCCCcccccc
Q 047247 365 ----VLACDDDNNSSNNGNGDREEE 385 (386)
Q Consensus 365 ----iVAcEG~~RvER~E~~~~W~~ 385 (386)
.+..+...|+++.|.++.|++
T Consensus 289 ~y~~~~~~~e~~ri~~lE~~DE~Ee 313 (334)
T 1rjd_A 289 IFNAQIPESERKRLRSLQFLDELEE 313 (334)
T ss_dssp HHHHTSCHHHHHHHHTTSCCCCHHH
T ss_pred HHHhcCCHHHHHHHHhcccCccHHH
Confidence 233344558999999999986
No 122
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=66.91 E-value=11 Score=33.99 Aligned_cols=104 Identities=8% Similarity=0.001 Sum_probs=55.0
Q ss_pred eEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc--eEEEEeecCCccccc
Q 047247 185 LHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP--FEFKVITGLNRLVEL 262 (386)
Q Consensus 185 VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip--FeF~~v~~~~~~e~l 262 (386)
-.|+|+|.|.|.--. .|+.+- |+..+||+|+.. ...++.+ .+.++..|++ .+|..- +..+.
T Consensus 65 ~~VLdiG~G~G~~~~----~la~~~--~~~~~v~~vD~s---~~~~~~a----~~~~~~~g~~~~v~~~~~----d~~~~ 127 (248)
T 3tfw_A 65 KRILEIGTLGGYSTI----WMAREL--PADGQLLTLEAD---AHHAQVA----RENLQLAGVDQRVTLREG----PALQS 127 (248)
T ss_dssp SEEEEECCTTSHHHH----HHHTTS--CTTCEEEEEECC---HHHHHHH----HHHHHHTTCTTTEEEEES----CHHHH
T ss_pred CEEEEecCCchHHHH----HHHHhC--CCCCEEEEEECC---HHHHHHH----HHHHHHcCCCCcEEEEEc----CHHHH
Confidence 479999999985433 444442 235799999952 2334333 3444556765 555443 22221
Q ss_pred cccccccCCCceEEEeecccccccccchHHHHHHH-HHhcCCcEEEEeeec
Q 047247 263 TKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQM-FQSLKPKVVTIVEEE 312 (386)
Q Consensus 263 ~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~-ir~L~P~vvvlvE~e 312 (386)
-+..-....=+.|+++.. ......+|+. .+.|+|.-+++++.-
T Consensus 128 l~~~~~~~~fD~V~~d~~-------~~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 128 LESLGECPAFDLIFIDAD-------KPNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp HHTCCSCCCCSEEEECSC-------GGGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred HHhcCCCCCeEEEEECCc-------hHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 111000112246655542 1223345554 467899988888643
No 123
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=66.44 E-value=10 Score=31.21 Aligned_cols=102 Identities=7% Similarity=-0.038 Sum_probs=52.7
Q ss_pred eEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEeecCCccccccc
Q 047247 185 LHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVITGLNRLVELTK 264 (386)
Q Consensus 185 VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v~~~~~~e~l~~ 264 (386)
-.|+|+|.|.|. +...|+.+ ++ . +|||+.. ...++.+.+++ +..|+..+|..- ++.+..+
T Consensus 43 ~~vLD~GcG~G~----~~~~l~~~--~~-~--v~~vD~~---~~~~~~a~~~~----~~~~~~~~~~~~----d~~~~~~ 102 (171)
T 1ws6_A 43 GRFLDPFAGSGA----VGLEAASE--GW-E--AVLVEKD---PEAVRLLKENV----RRTGLGARVVAL----PVEVFLP 102 (171)
T ss_dssp CEEEEETCSSCH----HHHHHHHT--TC-E--EEEECCC---HHHHHHHHHHH----HHHTCCCEEECS----CHHHHHH
T ss_pred CeEEEeCCCcCH----HHHHHHHC--CC-e--EEEEeCC---HHHHHHHHHHH----HHcCCceEEEec----cHHHHHH
Confidence 379999999984 44555555 32 3 9999952 23444444333 334554333322 3333211
Q ss_pred cccccC--CCceEEEeecccccccccchHHHHHHHH---HhcCCcEEEEeeecC
Q 047247 265 GTLGVK--EDEAVAVNCIGALRRVAVEERGAVIQMF---QSLKPKVVTIVEEEA 313 (386)
Q Consensus 265 ~~L~~~--~~EaLaVN~~~~Lh~l~~~~r~~vL~~i---r~L~P~vvvlvE~ea 313 (386)
. +.-. .=+.|+.|..+. . ..+.+++.+ +-|+|.-+++++-..
T Consensus 103 ~-~~~~~~~~D~i~~~~~~~-~-----~~~~~~~~~~~~~~L~~gG~~~~~~~~ 149 (171)
T 1ws6_A 103 E-AKAQGERFTVAFMAPPYA-M-----DLAALFGELLASGLVEAGGLYVLQHPK 149 (171)
T ss_dssp H-HHHTTCCEEEEEECCCTT-S-----CTTHHHHHHHHHTCEEEEEEEEEEEET
T ss_pred h-hhccCCceEEEEECCCCc-h-----hHHHHHHHHHhhcccCCCcEEEEEeCC
Confidence 1 0000 124666666544 2 123445544 568999887776543
No 124
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=66.23 E-value=43 Score=30.79 Aligned_cols=113 Identities=11% Similarity=0.147 Sum_probs=59.7
Q ss_pred HHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEe
Q 047247 174 AILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVI 253 (386)
Q Consensus 174 aILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v 253 (386)
.|++++.-...-+|+|+|.|.|. |-..|+.+. -++|||+.. ...++.+.+++.. .-.+ +.+
T Consensus 20 ~iv~~~~~~~~~~VLEIG~G~G~----lt~~La~~~-----~~V~avEid---~~~~~~~~~~~~~-----~~~v--~~i 80 (255)
T 3tqs_A 20 KIVSAIHPQKTDTLVEIGPGRGA----LTDYLLTEC-----DNLALVEID---RDLVAFLQKKYNQ-----QKNI--TIY 80 (255)
T ss_dssp HHHHHHCCCTTCEEEEECCTTTT----THHHHTTTS-----SEEEEEECC---HHHHHHHHHHHTT-----CTTE--EEE
T ss_pred HHHHhcCCCCcCEEEEEcccccH----HHHHHHHhC-----CEEEEEECC---HHHHHHHHHHHhh-----CCCc--EEE
Confidence 46677765555689999999986 556677662 489999852 2344444433322 1223 334
Q ss_pred ecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHHHhc--CCcEEEEeeecC
Q 047247 254 TGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMFQSL--KPKVVTIVEEEA 313 (386)
Q Consensus 254 ~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~ir~L--~P~vvvlvE~ea 313 (386)
.. ++.+++...+.-...-.|+-|..+.+. -+.+++.+... -..+++++..|.
T Consensus 81 ~~--D~~~~~~~~~~~~~~~~vv~NlPY~is------~~il~~ll~~~~~~~~~~lm~QkEv 134 (255)
T 3tqs_A 81 QN--DALQFDFSSVKTDKPLRVVGNLPYNIS------TPLLFHLFSQIHCIEDMHFMLQKEV 134 (255)
T ss_dssp ES--CTTTCCGGGSCCSSCEEEEEECCHHHH------HHHHHHHHHTGGGEEEEEEEEEHHH
T ss_pred Ec--chHhCCHHHhccCCCeEEEecCCcccC------HHHHHHHHhCCCChheEEEEEeHHH
Confidence 32 455555443311111236777766443 12344444332 234556665553
No 125
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=66.04 E-value=7.7 Score=33.86 Aligned_cols=103 Identities=12% Similarity=0.010 Sum_probs=54.7
Q ss_pred eEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCC-ceEEEEeecCCcccccc
Q 047247 185 LHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGV-PFEFKVITGLNRLVELT 263 (386)
Q Consensus 185 VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgi-pFeF~~v~~~~~~e~l~ 263 (386)
-+|+|+|.|.|.--.. ++.+. . -+||||+. +...++.+.++ ++..|+ ..+|.. . ++.+..
T Consensus 56 ~~vLDlgcG~G~~~~~----l~~~~--~--~~V~~vD~---s~~~l~~a~~~----~~~~~~~~v~~~~--~--D~~~~~ 116 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLE----ALSRY--A--AGATLIEM---DRAVSQQLIKN----LATLKAGNARVVN--S--NAMSFL 116 (202)
T ss_dssp CEEEETTCTTCHHHHH----HHHTT--C--SEEEEECS---CHHHHHHHHHH----HHHTTCCSEEEEC--S--CHHHHH
T ss_pred CeEEEeCCCcCHHHHH----HHhcC--C--CEEEEEEC---CHHHHHHHHHH----HHHcCCCcEEEEE--C--CHHHHH
Confidence 3789999998853222 23331 1 28999995 22345444433 344565 344332 1 333321
Q ss_pred ccccccCCCceEEEeecccccccccchHHHHHHHHHh---cCCcEEEEeeecC
Q 047247 264 KGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMFQS---LKPKVVTIVEEEA 313 (386)
Q Consensus 264 ~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~ir~---L~P~vvvlvE~ea 313 (386)
+. .-..=+.|++|..|. ......+++.++. |+|.-+++++...
T Consensus 117 ~~--~~~~fD~V~~~~p~~-----~~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 117 AQ--KGTPHNIVFVDPPFR-----RGLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp SS--CCCCEEEEEECCSSS-----TTTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred hh--cCCCCCEEEECCCCC-----CCcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 11 001114666665533 1334567777766 9999877776543
No 126
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=66.01 E-value=28 Score=32.75 Aligned_cols=135 Identities=10% Similarity=0.059 Sum_probs=68.4
Q ss_pred eEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHc-CCceEEEEeecCCcccc-c
Q 047247 185 LHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLM-GVPFEFKVITGLNRLVE-L 262 (386)
Q Consensus 185 VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~l-gipFeF~~v~~~~~~e~-l 262 (386)
-+|+|+|.|.|. +...|+.+. |.-+||+|+. +...++.+.+++.+.+..+ +-.+++..- +..+ +
T Consensus 97 ~~VLdiG~G~G~----~~~~l~~~~---~~~~v~~vDi---d~~~i~~ar~~~~~~~~~~~~~rv~v~~~----Da~~~l 162 (304)
T 2o07_A 97 RKVLIIGGGDGG----VLREVVKHP---SVESVVQCEI---DEDVIQVSKKFLPGMAIGYSSSKLTLHVG----DGFEFM 162 (304)
T ss_dssp CEEEEEECTTSH----HHHHHTTCT---TCCEEEEEES---CHHHHHHHHHHCHHHHGGGGCTTEEEEES----CHHHHH
T ss_pred CEEEEECCCchH----HHHHHHHcC---CCCEEEEEEC---CHHHHHHHHHHhHHhhcccCCCcEEEEEC----cHHHHH
Confidence 479999999874 555666653 4579999995 2335555556655544333 222444321 2221 1
Q ss_pred cccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEeeecCCCCCCccchHHHHHHHHHHHHHHHHHhh
Q 047247 263 TKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIVEEEADLTSSRYDFVKCFEECLRFYTLYFEMLE 341 (386)
Q Consensus 263 ~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlvE~ea~~n~~~~~F~~RF~eaL~~YsalFDsLd 341 (386)
... -..=+.|++++.........-....+++.+ +.|+|.-+++++.......+ +.+.....+...+|....
T Consensus 163 ~~~---~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~-----~~~~~~~~~l~~~f~~v~ 234 (304)
T 2o07_A 163 KQN---QDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLHL-----DLIKEMRQFCQSLFPVVA 234 (304)
T ss_dssp HTC---SSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEEECTTTCH-----HHHHHHHHHHHHHCSEEE
T ss_pred hhC---CCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCCcccch-----HHHHHHHHHHHHhCCCce
Confidence 110 012257777765322110001124566665 66899998888664433233 223333344555665443
No 127
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=65.59 E-value=27 Score=32.71 Aligned_cols=110 Identities=11% Similarity=0.064 Sum_probs=57.7
Q ss_pred eEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcC-CceEEEEeecCCcccccc
Q 047247 185 LHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMG-VPFEFKVITGLNRLVELT 263 (386)
Q Consensus 185 VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lg-ipFeF~~v~~~~~~e~l~ 263 (386)
-.|+|+|.|.|. +...|+.++ |..+||+|+. +...++...+++.+++..++ -.++|..- +..++.
T Consensus 97 ~~VLdiG~G~G~----~~~~l~~~~---~~~~v~~vDi---d~~~i~~a~~~~~~~~~~~~~~~v~~~~~----D~~~~~ 162 (304)
T 3bwc_A 97 ERVLIIGGGDGG----VLREVLRHG---TVEHCDLVDI---DGEVMEQSKQHFPQISRSLADPRATVRVG----DGLAFV 162 (304)
T ss_dssp CEEEEEECTTSH----HHHHHHTCT---TCCEEEEEES---CHHHHHHHHHHCHHHHGGGGCTTEEEEES----CHHHHH
T ss_pred CeEEEEcCCCCH----HHHHHHhCC---CCCEEEEEEC---CHHHHHHHHHHhHHhhcccCCCcEEEEEC----cHHHHH
Confidence 479999999874 555666552 4579999995 23355555566655544432 22444322 232221
Q ss_pred ccccccCCCceEEEeecccccccccch--HHHHHHHH-HhcCCcEEEEeee
Q 047247 264 KGTLGVKEDEAVAVNCIGALRRVAVEE--RGAVIQMF-QSLKPKVVTIVEE 311 (386)
Q Consensus 264 ~~~L~~~~~EaLaVN~~~~Lh~l~~~~--r~~vL~~i-r~L~P~vvvlvE~ 311 (386)
.. ..-..=++|++|+.. +...... ...+++.+ +.|+|.-++++..
T Consensus 163 ~~-~~~~~fDvIi~d~~~--~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 210 (304)
T 3bwc_A 163 RQ-TPDNTYDVVIIDTTD--PAGPASKLFGEAFYKDVLRILKPDGICCNQG 210 (304)
T ss_dssp HS-SCTTCEEEEEEECC-----------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred Hh-ccCCceeEEEECCCC--ccccchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 10 001112577776653 2211111 14567665 6689998777754
No 128
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=65.38 E-value=6.2 Score=40.72 Aligned_cols=82 Identities=15% Similarity=0.149 Sum_probs=51.8
Q ss_pred ceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcC-CceEEEEeecCCcccc
Q 047247 183 TKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMG-VPFEFKVITGLNRLVE 261 (386)
Q Consensus 183 ~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lg-ipFeF~~v~~~~~~e~ 261 (386)
+-+.|+|+|.|.|. |-..||.+ | -++|||+... ..++.+. ..|+.-| +..+|... ++|+
T Consensus 66 ~~~~vLDvGCG~G~----~~~~la~~--g---a~V~giD~~~---~~i~~a~----~~a~~~~~~~~~~~~~----~~~~ 125 (569)
T 4azs_A 66 RPLNVLDLGCAQGF----FSLSLASK--G---ATIVGIDFQQ---ENINVCR----ALAEENPDFAAEFRVG----RIEE 125 (569)
T ss_dssp SCCEEEEETCTTSH----HHHHHHHT--T---CEEEEEESCH---HHHHHHH----HHHHTSTTSEEEEEEC----CHHH
T ss_pred CCCeEEEECCCCcH----HHHHHHhC--C---CEEEEECCCH---HHHHHHH----HHHHhcCCCceEEEEC----CHHH
Confidence 44789999999985 77788876 3 3899999632 2333222 3455455 67788776 3555
Q ss_pred ccccccccCCCceEEEeecccccccc
Q 047247 262 LTKGTLGVKEDEAVAVNCIGALRRVA 287 (386)
Q Consensus 262 l~~~~L~~~~~EaLaVN~~~~Lh~l~ 287 (386)
+... ..++..=+|-|+--|||+.
T Consensus 126 ~~~~---~~~~~fD~v~~~e~~ehv~ 148 (569)
T 4azs_A 126 VIAA---LEEGEFDLAIGLSVFHHIV 148 (569)
T ss_dssp HHHH---CCTTSCSEEEEESCHHHHH
T ss_pred Hhhh---ccCCCccEEEECcchhcCC
Confidence 5321 1233344677777899986
No 129
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=64.81 E-value=29 Score=30.77 Aligned_cols=100 Identities=13% Similarity=0.138 Sum_probs=53.2
Q ss_pred eeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc-eEEEEeecCCccccc
Q 047247 184 KLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP-FEFKVITGLNRLVEL 262 (386)
Q Consensus 184 ~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip-FeF~~v~~~~~~e~l 262 (386)
.-+|+|+|.|.|.-=..|.+. . |..++|||+.. ...++.+ .+.++..|++ ++|.. . +++++
T Consensus 71 ~~~vLDiG~G~G~~~~~la~~---~----~~~~v~~vD~s---~~~~~~a----~~~~~~~~~~~v~~~~--~--d~~~~ 132 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLPIKIC---F----PHLHVTIVDSL---NKRITFL----EKLSEALQLENTTFCH--D--RAETF 132 (240)
T ss_dssp CCEEEEECSSSCTTHHHHHHH---C----TTCEEEEEESC---HHHHHHH----HHHHHHHTCSSEEEEE--S--CHHHH
T ss_pred CCEEEEecCCCCHHHHHHHHh---C----CCCEEEEEeCC---HHHHHHH----HHHHHHcCCCCEEEEe--c--cHHHh
Confidence 348999999998633333221 2 34689999952 2233333 3345556764 44433 2 45554
Q ss_pred ccc-ccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEee
Q 047247 263 TKG-TLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIVE 310 (386)
Q Consensus 263 ~~~-~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlvE 310 (386)
... ... ..=+.|+.+.. .....+++.+ +-|+|.-.+++.
T Consensus 133 ~~~~~~~-~~fD~V~~~~~--------~~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 133 GQRKDVR-ESYDIVTARAV--------ARLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp TTCTTTT-TCEEEEEEECC--------SCHHHHHHHHGGGEEEEEEEEEE
T ss_pred ccccccc-CCccEEEEecc--------CCHHHHHHHHHHhcCCCCEEEEE
Confidence 321 000 01133333321 2356788877 678999777664
No 130
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=64.61 E-value=44 Score=28.48 Aligned_cols=104 Identities=11% Similarity=0.073 Sum_probs=55.0
Q ss_pred HHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc-eEEEEe
Q 047247 175 ILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP-FEFKVI 253 (386)
Q Consensus 175 ILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip-FeF~~v 253 (386)
+++.+.-.+.-+|+|+|.|.|..- ..|+.+ + -++|||+. +...++.+.+++ +..|++ .+|..-
T Consensus 69 ~~~~l~~~~~~~vLdiG~G~G~~~----~~la~~-~----~~v~~vD~---~~~~~~~a~~~~----~~~~~~~v~~~~~ 132 (210)
T 3lbf_A 69 MTELLELTPQSRVLEIGTGSGYQT----AILAHL-V----QHVCSVER---IKGLQWQARRRL----KNLDLHNVSTRHG 132 (210)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHH----HHHHHH-S----SEEEEEES---CHHHHHHHHHHH----HHTTCCSEEEEES
T ss_pred HHHhcCCCCCCEEEEEcCCCCHHH----HHHHHh-C----CEEEEEec---CHHHHHHHHHHH----HHcCCCceEEEEC
Confidence 355555455668999999988533 233333 1 58999995 233454444443 345655 444332
Q ss_pred ecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHHHhcCCcEEEEee
Q 047247 254 TGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMFQSLKPKVVTIVE 310 (386)
Q Consensus 254 ~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~ir~L~P~vvvlvE 310 (386)
++.+..+. -..=+.|+++ ..+|++.. ...+.|+|.-.+++.
T Consensus 133 ----d~~~~~~~---~~~~D~i~~~--~~~~~~~~-------~~~~~L~pgG~lv~~ 173 (210)
T 3lbf_A 133 ----DGWQGWQA---RAPFDAIIVT--AAPPEIPT-------ALMTQLDEGGILVLP 173 (210)
T ss_dssp ----CGGGCCGG---GCCEEEEEES--SBCSSCCT-------HHHHTEEEEEEEEEE
T ss_pred ----CcccCCcc---CCCccEEEEc--cchhhhhH-------HHHHhcccCcEEEEE
Confidence 23222111 0111344444 44677653 345778887555543
No 131
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=64.51 E-value=46 Score=29.82 Aligned_cols=110 Identities=15% Similarity=0.045 Sum_probs=57.3
Q ss_pred ceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEeecCCccccc
Q 047247 183 TKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVITGLNRLVEL 262 (386)
Q Consensus 183 ~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v~~~~~~e~l 262 (386)
+.-.|+|+|.|.|. +...|+.+. +. +||||+.. ...++.+.++ ++..|+.=....+.. ++.++
T Consensus 49 ~~~~vLDlG~G~G~----~~~~la~~~---~~-~v~gvDi~---~~~~~~a~~n----~~~~~~~~~v~~~~~--D~~~~ 111 (259)
T 3lpm_A 49 RKGKIIDLCSGNGI----IPLLLSTRT---KA-KIVGVEIQ---ERLADMAKRS----VAYNQLEDQIEIIEY--DLKKI 111 (259)
T ss_dssp SCCEEEETTCTTTH----HHHHHHTTC---CC-EEEEECCS---HHHHHHHHHH----HHHTTCTTTEEEECS--CGGGG
T ss_pred CCCEEEEcCCchhH----HHHHHHHhc---CC-cEEEEECC---HHHHHHHHHH----HHHCCCcccEEEEEC--cHHHh
Confidence 34579999999984 445677773 22 99999952 2234333333 344566522333322 34444
Q ss_pred cccccccCCCceEEEeeccccc---ccc-------------cchHHHHHHHH-HhcCCcEEEEee
Q 047247 263 TKGTLGVKEDEAVAVNCIGALR---RVA-------------VEERGAVIQMF-QSLKPKVVTIVE 310 (386)
Q Consensus 263 ~~~~L~~~~~EaLaVN~~~~Lh---~l~-------------~~~r~~vL~~i-r~L~P~vvvlvE 310 (386)
... +.-..=+.|+.|-.+.-. .+. ....+.+++.+ +-|+|.-.+++.
T Consensus 112 ~~~-~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 175 (259)
T 3lpm_A 112 TDL-IPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFV 175 (259)
T ss_dssp GGT-SCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhh-hccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEE
Confidence 321 111223677887665322 111 11234566665 557998777663
No 132
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=64.24 E-value=24 Score=32.51 Aligned_cols=104 Identities=13% Similarity=0.072 Sum_probs=58.7
Q ss_pred eeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc--eEEEEeecCCcccc
Q 047247 184 KLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP--FEFKVITGLNRLVE 261 (386)
Q Consensus 184 ~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip--FeF~~v~~~~~~e~ 261 (386)
.-+|+|+|.|.|. +...|+.+ ..|..++|||+.. ...++.+. +.++..|+. .+|..- ++.+
T Consensus 119 ~~~vLDiGcG~G~----~~~~la~~--~~~~~~v~gvD~s---~~~~~~a~----~~~~~~~~~~~v~~~~~----d~~~ 181 (305)
T 3ocj_A 119 GCVVASVPCGWMS----ELLALDYS--ACPGVQLVGIDYD---PEALDGAT----RLAAGHALAGQITLHRQ----DAWK 181 (305)
T ss_dssp TCEEEETTCTTCH----HHHTSCCT--TCTTCEEEEEESC---HHHHHHHH----HHHTTSTTGGGEEEEEC----CGGG
T ss_pred CCEEEEecCCCCH----HHHHHHHh--cCCCCeEEEEECC---HHHHHHHH----HHHHhcCCCCceEEEEC----chhc
Confidence 4579999999873 34444422 2356799999952 23443333 334455665 555443 3444
Q ss_pred ccccccccCCCceEEEeecccccccccc-hHHHHHHHH-HhcCCcEEEEee
Q 047247 262 LTKGTLGVKEDEAVAVNCIGALRRVAVE-ERGAVIQMF-QSLKPKVVTIVE 310 (386)
Q Consensus 262 l~~~~L~~~~~EaLaVN~~~~Lh~l~~~-~r~~vL~~i-r~L~P~vvvlvE 310 (386)
+.. . +..=+|-|...+||+... ....+|+.+ +.|+|.-.+++.
T Consensus 182 ~~~-----~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 226 (305)
T 3ocj_A 182 LDT-----R-EGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTS 226 (305)
T ss_dssp CCC-----C-SCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCc-----c-CCeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 332 1 333344455668887522 233466665 568998777763
No 133
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=63.83 E-value=55 Score=27.79 Aligned_cols=92 Identities=8% Similarity=-0.045 Sum_probs=50.8
Q ss_pred eeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEeecCCcccccc
Q 047247 184 KLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVITGLNRLVELT 263 (386)
Q Consensus 184 ~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v~~~~~~e~l~ 263 (386)
.-.|+|+|.|.|. +...|+.+ |+ -++|||+.. ...++.+.++ ++..|+..+|..- ++.++.
T Consensus 50 ~~~vlD~g~G~G~----~~~~l~~~--~~--~~v~~vD~~---~~~~~~a~~~----~~~~~~~~~~~~~----d~~~~~ 110 (207)
T 1wy7_A 50 GKVVADLGAGTGV----LSYGALLL--GA--KEVICVEVD---KEAVDVLIEN----LGEFKGKFKVFIG----DVSEFN 110 (207)
T ss_dssp TCEEEEETCTTCH----HHHHHHHT--TC--SEEEEEESC---HHHHHHHHHH----TGGGTTSEEEEES----CGGGCC
T ss_pred cCEEEEeeCCCCH----HHHHHHHc--CC--CEEEEEECC---HHHHHHHHHH----HHHcCCCEEEEEC----chHHcC
Confidence 3479999999986 44455655 21 289999952 2344333333 3445664444332 354442
Q ss_pred ccccccCCCceEEEeecccccccccchHHHHHHHHHhcC
Q 047247 264 KGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMFQSLK 302 (386)
Q Consensus 264 ~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~ir~L~ 302 (386)
. .=+.|+.|..+... .......+|+.+..+-
T Consensus 111 ~------~~D~v~~~~p~~~~--~~~~~~~~l~~~~~~l 141 (207)
T 1wy7_A 111 S------RVDIVIMNPPFGSQ--RKHADRPFLLKAFEIS 141 (207)
T ss_dssp C------CCSEEEECCCCSSS--STTTTHHHHHHHHHHC
T ss_pred C------CCCEEEEcCCCccc--cCCchHHHHHHHHHhc
Confidence 1 23678888775332 2233445666665554
No 134
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=62.67 E-value=42 Score=29.01 Aligned_cols=89 Identities=15% Similarity=0.012 Sum_probs=46.8
Q ss_pred eeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEeecCCcccccc
Q 047247 184 KLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVITGLNRLVELT 263 (386)
Q Consensus 184 ~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v~~~~~~e~l~ 263 (386)
.-.|+|+|.|.|.- ...|+.+ |||+.. ...++. |+..++ +|... +++++.
T Consensus 48 ~~~vLDiG~G~G~~----~~~l~~~---------~~vD~s---~~~~~~--------a~~~~~--~~~~~----d~~~~~ 97 (219)
T 1vlm_A 48 EGRGVEIGVGTGRF----AVPLKIK---------IGVEPS---ERMAEI--------ARKRGV--FVLKG----TAENLP 97 (219)
T ss_dssp SSCEEEETCTTSTT----HHHHTCC---------EEEESC---HHHHHH--------HHHTTC--EEEEC----BTTBCC
T ss_pred CCcEEEeCCCCCHH----HHHHHHH---------hccCCC---HHHHHH--------HHhcCC--EEEEc----ccccCC
Confidence 34799999999863 3345444 888852 223332 332243 33322 243332
Q ss_pred ccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEe
Q 047247 264 KGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIV 309 (386)
Q Consensus 264 ~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlv 309 (386)
..++..=+|-|...||++. ++ ..+|+.+ +.|+|.-.+++
T Consensus 98 -----~~~~~fD~v~~~~~l~~~~-~~-~~~l~~~~~~L~pgG~l~i 137 (219)
T 1vlm_A 98 -----LKDESFDFALMVTTICFVD-DP-ERALKEAYRILKKGGYLIV 137 (219)
T ss_dssp -----SCTTCEEEEEEESCGGGSS-CH-HHHHHHHHHHEEEEEEEEE
T ss_pred -----CCCCCeeEEEEcchHhhcc-CH-HHHHHHHHHHcCCCcEEEE
Confidence 2223222333445688873 44 4555555 66899865555
No 135
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=62.10 E-value=40 Score=31.42 Aligned_cols=101 Identities=13% Similarity=0.114 Sum_probs=56.8
Q ss_pred hcCchHHHHH-HH----HHHHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHH
Q 047247 159 EVSPWTTFGH-VA----SNGAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEI 233 (386)
Q Consensus 159 ~~~P~~kfa~-~t----ANqaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~et 233 (386)
...|=.++++ |. .-..|++++.-... +|+|+|.|.|. |-..|+.+. -++|||+.... .++.+
T Consensus 18 ~~~~~k~~GQnfL~d~~i~~~Iv~~~~~~~~-~VLEIG~G~G~----lt~~L~~~~-----~~V~avEid~~---~~~~l 84 (271)
T 3fut_A 18 GLFADKRFGQNFLVSEAHLRRIVEAARPFTG-PVFEVGPGLGA----LTRALLEAG-----AEVTAIEKDLR---LRPVL 84 (271)
T ss_dssp TCCCSTTSSCCEECCHHHHHHHHHHHCCCCS-CEEEECCTTSH----HHHHHHHTT-----CCEEEEESCGG---GHHHH
T ss_pred CCCccccCCccccCCHHHHHHHHHhcCCCCC-eEEEEeCchHH----HHHHHHHcC-----CEEEEEECCHH---HHHHH
Confidence 3445445544 22 22456677665556 99999999984 667777763 37999986332 33333
Q ss_pred HHHHHHHHHHcCCceEEEEeecCCccccccccccccCCCceEEEeeccccc
Q 047247 234 GQRMEKFARLMGVPFEFKVITGLNRLVELTKGTLGVKEDEAVAVNCIGALR 284 (386)
Q Consensus 234 g~rL~~fA~~lgipFeF~~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh 284 (386)
.+++. +- .++.+.. +..+++...+ .....|+-|..+.+.
T Consensus 85 ~~~~~------~~--~v~vi~~--D~l~~~~~~~--~~~~~iv~NlPy~is 123 (271)
T 3fut_A 85 EETLS------GL--PVRLVFQ--DALLYPWEEV--PQGSLLVANLPYHIA 123 (271)
T ss_dssp HHHTT------TS--SEEEEES--CGGGSCGGGS--CTTEEEEEEECSSCC
T ss_pred HHhcC------CC--CEEEEEC--ChhhCChhhc--cCccEEEecCccccc
Confidence 33322 12 2344432 4544444322 134578888877654
No 136
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=61.99 E-value=71 Score=31.44 Aligned_cols=108 Identities=23% Similarity=0.187 Sum_probs=61.2
Q ss_pred HHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc-eEEEEe
Q 047247 175 ILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP-FEFKVI 253 (386)
Q Consensus 175 ILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip-FeF~~v 253 (386)
+++.+.....-.|+|+|.|.|.--. .||.+ .-+++||+. +...++.+.++ |+..|++ .+|..-
T Consensus 278 ~~~~l~~~~~~~VLDlgcG~G~~~~----~la~~-----~~~V~gvD~---s~~al~~A~~n----~~~~~~~~v~f~~~ 341 (433)
T 1uwv_A 278 ALEWLDVQPEDRVLDLFCGMGNFTL----PLATQ-----AASVVGVEG---VPALVEKGQQN----ARLNGLQNVTFYHE 341 (433)
T ss_dssp HHHHHTCCTTCEEEEESCTTTTTHH----HHHTT-----SSEEEEEES---CHHHHHHHHHH----HHHTTCCSEEEEEC
T ss_pred HHHhhcCCCCCEEEECCCCCCHHHH----HHHhh-----CCEEEEEeC---CHHHHHHHHHH----HHHcCCCceEEEEC
Confidence 3444443333479999999986443 34554 258999995 33345444433 3456664 555543
Q ss_pred ecCCcccccccc-ccccCCCceEEEeecccccccccchHHHHHHHHHhcCCcEEEEe
Q 047247 254 TGLNRLVELTKG-TLGVKEDEAVAVNCIGALRRVAVEERGAVIQMFQSLKPKVVTIV 309 (386)
Q Consensus 254 ~~~~~~e~l~~~-~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~ir~L~P~vvvlv 309 (386)
++++.-.. .+.-..=+.|++|-... ..+.+++.|..++|+.++.+
T Consensus 342 ----d~~~~l~~~~~~~~~fD~Vv~dPPr~-------g~~~~~~~l~~~~p~~ivyv 387 (433)
T 1uwv_A 342 ----NLEEDVTKQPWAKNGFDKVLLDPARA-------GAAGVMQQIIKLEPIRIVYV 387 (433)
T ss_dssp ----CTTSCCSSSGGGTTCCSEEEECCCTT-------CCHHHHHHHHHHCCSEEEEE
T ss_pred ----CHHHHhhhhhhhcCCCCEEEECCCCc-------cHHHHHHHHHhcCCCeEEEE
Confidence 34332111 11111225677664421 12468889999999988877
No 137
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=61.84 E-value=19 Score=30.79 Aligned_cols=107 Identities=12% Similarity=0.050 Sum_probs=55.5
Q ss_pred HHHHHhhcC--CCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc-e
Q 047247 172 NGAILEALD--GETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP-F 248 (386)
Q Consensus 172 NqaILeA~~--g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip-F 248 (386)
...+++.+. -.+.-.|+|+|.|.|. +...|+.++ ..+++||+.. ...++.+.+ .++..|++ +
T Consensus 47 ~~~~~~~l~~~~~~~~~vLDiG~G~G~----~~~~l~~~~----~~~v~~vD~s---~~~~~~a~~----~~~~~~~~~v 111 (205)
T 3grz_A 47 TQLAMLGIERAMVKPLTVADVGTGSGI----LAIAAHKLG----AKSVLATDIS---DESMTAAEE----NAALNGIYDI 111 (205)
T ss_dssp HHHHHHHHHHHCSSCCEEEEETCTTSH----HHHHHHHTT----CSEEEEEESC---HHHHHHHHH----HHHHTTCCCC
T ss_pred HHHHHHHHHHhccCCCEEEEECCCCCH----HHHHHHHCC----CCEEEEEECC---HHHHHHHHH----HHHHcCCCce
Confidence 344444443 2344689999999983 334466652 3599999952 233433333 34445665 5
Q ss_pred EEEEeecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEe
Q 047247 249 EFKVITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIV 309 (386)
Q Consensus 249 eF~~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlv 309 (386)
+|..- ++.+... ..=+.|+.|.. +|+ ...+|+.+ +.|+|.-.+++
T Consensus 112 ~~~~~----d~~~~~~-----~~fD~i~~~~~--~~~-----~~~~l~~~~~~L~~gG~l~~ 157 (205)
T 3grz_A 112 ALQKT----SLLADVD-----GKFDLIVANIL--AEI-----LLDLIPQLDSHLNEDGQVIF 157 (205)
T ss_dssp EEEES----STTTTCC-----SCEEEEEEESC--HHH-----HHHHGGGSGGGEEEEEEEEE
T ss_pred EEEec----cccccCC-----CCceEEEECCc--HHH-----HHHHHHHHHHhcCCCCEEEE
Confidence 55433 2332211 11234444433 333 24455554 45788866655
No 138
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=61.57 E-value=56 Score=29.65 Aligned_cols=112 Identities=13% Similarity=0.025 Sum_probs=57.3
Q ss_pred HHHHhhcC---CCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceE
Q 047247 173 GAILEALD---GETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFE 249 (386)
Q Consensus 173 qaILeA~~---g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFe 249 (386)
.+|+.+++ =...=.|+|+|.+.|. |...+-.+... .=+|+||+... ..+ +.|.+.|+.. -..+
T Consensus 63 ~~ll~~l~~~~l~~g~~VLDlG~GtG~-~t~~la~~v~~-----~G~V~avD~s~---~~l----~~l~~~a~~r-~nv~ 128 (232)
T 3id6_C 63 GAILKGLKTNPIRKGTKVLYLGAASGT-TISHVSDIIEL-----NGKAYGVEFSP---RVV----RELLLVAQRR-PNIF 128 (232)
T ss_dssp HHHHTTCSCCSCCTTCEEEEETCTTSH-HHHHHHHHHTT-----TSEEEEEECCH---HHH----HHHHHHHHHC-TTEE
T ss_pred HHHHhhhhhcCCCCCCEEEEEeecCCH-HHHHHHHHhCC-----CCEEEEEECcH---HHH----HHHHHHhhhc-CCeE
Confidence 34455543 3334578999999988 77766665432 23899999521 122 2344455443 1233
Q ss_pred EEEeecCCccccccc-cccccCCCceEEEeecccccccccchHHHHHHHHH-hcCCcEEEEe
Q 047247 250 FKVITGLNRLVELTK-GTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMFQ-SLKPKVVTIV 309 (386)
Q Consensus 250 F~~v~~~~~~e~l~~-~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~ir-~L~P~vvvlv 309 (386)
| +.. +...... ..+ ...=+++++|... ....+.++..++ -|+|.-.++.
T Consensus 129 ~--i~~--Da~~~~~~~~~-~~~~D~I~~d~a~------~~~~~il~~~~~~~LkpGG~lvi 179 (232)
T 3id6_C 129 P--LLA--DARFPQSYKSV-VENVDVLYVDIAQ------PDQTDIAIYNAKFFLKVNGDMLL 179 (232)
T ss_dssp E--EEC--CTTCGGGTTTT-CCCEEEEEECCCC------TTHHHHHHHHHHHHEEEEEEEEE
T ss_pred E--EEc--ccccchhhhcc-ccceEEEEecCCC------hhHHHHHHHHHHHhCCCCeEEEE
Confidence 2 221 2222111 111 1111455555332 344555666666 7999866554
No 139
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=61.28 E-value=63 Score=27.85 Aligned_cols=98 Identities=15% Similarity=0.215 Sum_probs=52.9
Q ss_pred ceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEeecCCccccc
Q 047247 183 TKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVITGLNRLVEL 262 (386)
Q Consensus 183 ~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v~~~~~~e~l 262 (386)
+.-.|+|+|.|.|.-- ..|+.+ ++ ++|||+.. ...++.+.+++ -..+|... ++.++
T Consensus 40 ~~~~vLdiG~G~G~~~----~~l~~~--~~---~v~~~D~s---~~~~~~a~~~~--------~~~~~~~~----d~~~~ 95 (239)
T 3bxo_A 40 EASSLLDVACGTGTHL----EHFTKE--FG---DTAGLELS---EDMLTHARKRL--------PDATLHQG----DMRDF 95 (239)
T ss_dssp TCCEEEEETCTTSHHH----HHHHHH--HS---EEEEEESC---HHHHHHHHHHC--------TTCEEEEC----CTTTC
T ss_pred CCCeEEEecccCCHHH----HHHHHh--CC---cEEEEeCC---HHHHHHHHHhC--------CCCEEEEC----CHHHc
Confidence 4458999999998533 334443 22 89999852 22343333321 12344332 23333
Q ss_pred cccccccCCCc-eEEEeeccccccccc-chHHHHHHHH-HhcCCcEEEEee
Q 047247 263 TKGTLGVKEDE-AVAVNCIGALRRVAV-EERGAVIQMF-QSLKPKVVTIVE 310 (386)
Q Consensus 263 ~~~~L~~~~~E-aLaVN~~~~Lh~l~~-~~r~~vL~~i-r~L~P~vvvlvE 310 (386)
. . ++. -+|+.+...+||+.. .....+|+.+ +.|+|.-.++++
T Consensus 96 ~-----~-~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (239)
T 3bxo_A 96 R-----L-GRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVE 140 (239)
T ss_dssp C-----C-SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred c-----c-CCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 2 1 222 233333337888753 3455677665 567999877775
No 140
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=61.28 E-value=48 Score=28.58 Aligned_cols=105 Identities=15% Similarity=0.081 Sum_probs=55.9
Q ss_pred eEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCC---ceEEEEeecCCcccc
Q 047247 185 LHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGV---PFEFKVITGLNRLVE 261 (386)
Q Consensus 185 VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgi---pFeF~~v~~~~~~e~ 261 (386)
-.|+|+|.|.|.- ...++.+. . -++|||+. +...++.+.++ ++..|+ ..+|..- ++.+
T Consensus 55 ~~vLDlGcGtG~~----~~~~~~~~--~--~~v~gvD~---s~~~l~~a~~~----~~~~~~~~~~v~~~~~----d~~~ 115 (201)
T 2ift_A 55 SECLDGFAGSGSL----GFEALSRQ--A--KKVTFLEL---DKTVANQLKKN----LQTLKCSSEQAEVINQ----SSLD 115 (201)
T ss_dssp CEEEETTCTTCHH----HHHHHHTT--C--SEEEEECS---CHHHHHHHHHH----HHHTTCCTTTEEEECS----CHHH
T ss_pred CeEEEcCCccCHH----HHHHHHcc--C--CEEEEEEC---CHHHHHHHHHH----HHHhCCCccceEEEEC----CHHH
Confidence 3689999998842 22233332 1 48999995 23345444443 344565 3444332 2333
Q ss_pred ccccccccCC-CceEEEeecccccccccchHHHHHHHHHh---cCCcEEEEeeecCC
Q 047247 262 LTKGTLGVKE-DEAVAVNCIGALRRVAVEERGAVIQMFQS---LKPKVVTIVEEEAD 314 (386)
Q Consensus 262 l~~~~L~~~~-~EaLaVN~~~~Lh~l~~~~r~~vL~~ir~---L~P~vvvlvE~ea~ 314 (386)
+.+. +.-.. =+.|+.|..+ | ....+.+|+.+.. |+|.-+++++....
T Consensus 116 ~~~~-~~~~~~fD~I~~~~~~--~---~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 116 FLKQ-PQNQPHFDVVFLDPPF--H---FNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp HTTS-CCSSCCEEEEEECCCS--S---SCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred HHHh-hccCCCCCEEEECCCC--C---CccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 2211 00011 1456666553 3 2345678888755 99997777765443
No 141
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=61.12 E-value=45 Score=31.13 Aligned_cols=108 Identities=11% Similarity=0.064 Sum_probs=55.5
Q ss_pred HHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc-eEEE
Q 047247 173 GAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP-FEFK 251 (386)
Q Consensus 173 qaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip-FeF~ 251 (386)
..+++.+.-...-+|+|+|.|.|. +...|+.+ +++.-++|||+. +...++.+.++ ++..|++ .+|.
T Consensus 65 ~~l~~~l~~~~~~~VLDiGcG~G~----~~~~la~~--~~~~~~v~gvD~---s~~~~~~a~~~----~~~~g~~~v~~~ 131 (317)
T 1dl5_A 65 ALFMEWVGLDKGMRVLEIGGGTGY----NAAVMSRV--VGEKGLVVSVEY---SRKICEIAKRN----VERLGIENVIFV 131 (317)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSH----HHHHHHHH--HCTTCEEEEEES---CHHHHHHHHHH----HHHTTCCSEEEE
T ss_pred HHHHHhcCCCCcCEEEEecCCchH----HHHHHHHh--cCCCCEEEEEEC---CHHHHHHHHHH----HHHcCCCCeEEE
Confidence 345555554455689999999874 33444443 222468999995 22344444333 3445654 4443
Q ss_pred EeecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHHHhcCCcEEEEe
Q 047247 252 VITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMFQSLKPKVVTIV 309 (386)
Q Consensus 252 ~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~ir~L~P~vvvlv 309 (386)
.- +..+..+. -.+=+.|+++. .+|++. + ...+.|+|.-++++
T Consensus 132 ~~----d~~~~~~~---~~~fD~Iv~~~--~~~~~~----~---~~~~~LkpgG~lvi 173 (317)
T 1dl5_A 132 CG----DGYYGVPE---FSPYDVIFVTV--GVDEVP----E---TWFTQLKEGGRVIV 173 (317)
T ss_dssp ES----CGGGCCGG---GCCEEEEEECS--BBSCCC----H---HHHHHEEEEEEEEE
T ss_pred EC----Chhhcccc---CCCeEEEEEcC--CHHHHH----H---HHHHhcCCCcEEEE
Confidence 32 23332111 01113444443 456664 2 23456778755544
No 142
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=59.73 E-value=51 Score=31.42 Aligned_cols=108 Identities=17% Similarity=0.072 Sum_probs=60.3
Q ss_pred HHHHhhcC-CCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEE
Q 047247 173 GAILEALD-GETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFK 251 (386)
Q Consensus 173 qaILeA~~-g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~ 251 (386)
..|++.+. -.+.-+|+|+|.|.|. +...|+.+. |.+++|+++.+ ..++ .|+... ..+|.
T Consensus 198 ~~l~~~~~~~~~~~~vLDvG~G~G~----~~~~l~~~~---~~~~~~~~D~~----~~~~--------~a~~~~-~v~~~ 257 (372)
T 1fp1_D 198 KRMLEIYTGFEGISTLVDVGGGSGR----NLELIISKY---PLIKGINFDLP----QVIE--------NAPPLS-GIEHV 257 (372)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEECH----HHHT--------TCCCCT-TEEEE
T ss_pred HHHHHHhhccCCCCEEEEeCCCCcH----HHHHHHHHC---CCCeEEEeChH----HHHH--------hhhhcC-CCEEE
Confidence 56777765 2445689999999985 445555543 46799999852 1222 122211 13443
Q ss_pred EeecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEE-eeec
Q 047247 252 VITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTI-VEEE 312 (386)
Q Consensus 252 ~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvl-vE~e 312 (386)
.- ++.+ . +. . .=+|-+...||++.......+|+.+ +.|+|.-.++ +|..
T Consensus 258 ~~----d~~~-~---~~--~--~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~ 308 (372)
T 1fp1_D 258 GG----DMFA-S---VP--Q--GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFI 308 (372)
T ss_dssp EC----CTTT-C---CC--C--EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred eC----Cccc-C---CC--C--CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 32 2322 1 11 1 3334455668998655455777776 5579986444 4543
No 143
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=59.22 E-value=61 Score=30.14 Aligned_cols=136 Identities=12% Similarity=0.072 Sum_probs=68.6
Q ss_pred eEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcC-CceEEEEeecCCcccccc
Q 047247 185 LHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMG-VPFEFKVITGLNRLVELT 263 (386)
Q Consensus 185 VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lg-ipFeF~~v~~~~~~e~l~ 263 (386)
-.|+|+|.|.|. +...|+.+. |.-+||+|+. +...++.+.+++.+++..++ -.+++..- +..+.-
T Consensus 92 ~~VLdiG~G~G~----~~~~l~~~~---~~~~v~~vDi---d~~~~~~a~~~~~~~~~~~~~~~v~~~~~----D~~~~l 157 (296)
T 1inl_A 92 KKVLIIGGGDGG----TLREVLKHD---SVEKAILCEV---DGLVIEAARKYLKQTSCGFDDPRAEIVIA----NGAEYV 157 (296)
T ss_dssp CEEEEEECTTCH----HHHHHTTST---TCSEEEEEES---CHHHHHHHHHHCHHHHGGGGCTTEEEEES----CHHHHG
T ss_pred CEEEEEcCCcCH----HHHHHHhcC---CCCEEEEEEC---CHHHHHHHHHHhHhhccccCCCceEEEEC----cHHHHH
Confidence 479999999984 556666653 3479999985 23455556666655544342 22443322 222211
Q ss_pred ccccccCCCceEEEeeccc-ccccccchHHHHHHHH-HhcCCcEEEEeeecCCCCCCccchHHHHHHHHHHHHHHHHHhh
Q 047247 264 KGTLGVKEDEAVAVNCIGA-LRRVAVEERGAVIQMF-QSLKPKVVTIVEEEADLTSSRYDFVKCFEECLRFYTLYFEMLE 341 (386)
Q Consensus 264 ~~~L~~~~~EaLaVN~~~~-Lh~l~~~~r~~vL~~i-r~L~P~vvvlvE~ea~~n~~~~~F~~RF~eaL~~YsalFDsLd 341 (386)
.. . -..=+.|++|.... ......--...+++.+ +.|+|.-+++++.. ++ ..-...+.+.+......|....
T Consensus 158 ~~-~-~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~----~~-~~~~~~~~~~~~~l~~~F~~v~ 230 (296)
T 1inl_A 158 RK-F-KNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETE----DP-FYDIGWFKLAYRRISKVFPITR 230 (296)
T ss_dssp GG-C-SSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEECC----CT-TTTHHHHHHHHHHHHHHCSEEE
T ss_pred hh-C-CCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEcc----Cc-ccCHHHHHHHHHHHHHHCCceE
Confidence 10 0 01125777765432 1110000124566665 56899988888532 22 0113455555555555565443
No 144
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=59.09 E-value=31 Score=32.72 Aligned_cols=115 Identities=15% Similarity=0.110 Sum_probs=62.7
Q ss_pred HHHHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEE
Q 047247 171 SNGAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEF 250 (386)
Q Consensus 171 ANqaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF 250 (386)
..+.+++.+.....-+|+|+|.|.|.- ...|+.+. |..++|+|+.. ...++.+.+++ +..|+..+|
T Consensus 184 ~~~~ll~~l~~~~~~~VLDlGcG~G~~----~~~la~~~---~~~~v~~vD~s---~~~l~~a~~~~----~~~~~~~~~ 249 (343)
T 2pjd_A 184 GSQLLLSTLTPHTKGKVLDVGCGAGVL----SVAFARHS---PKIRLTLCDVS---APAVEASRATL----AANGVEGEV 249 (343)
T ss_dssp HHHHHHHHSCTTCCSBCCBTTCTTSHH----HHHHHHHC---TTCBCEEEESB---HHHHHHHHHHH----HHTTCCCEE
T ss_pred HHHHHHHhcCcCCCCeEEEecCccCHH----HHHHHHHC---CCCEEEEEECC---HHHHHHHHHHH----HHhCCCCEE
Confidence 356777877433344799999998863 33344432 45699999952 23454444433 345666665
Q ss_pred EEeecCCccccccccccccCCCceEEEeecccccccc---cchHHHHHHHH-HhcCCcEEEEee
Q 047247 251 KVITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVA---VEERGAVIQMF-QSLKPKVVTIVE 310 (386)
Q Consensus 251 ~~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~---~~~r~~vL~~i-r~L~P~vvvlvE 310 (386)
..- +..+... ..=+.|+.|.. +|+.. ......+|+.+ +.|+|.-.+++.
T Consensus 250 ~~~----d~~~~~~-----~~fD~Iv~~~~--~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 302 (343)
T 2pjd_A 250 FAS----NVFSEVK-----GRFDMIISNPP--FHDGMQTSLDAAQTLIRGAVRHLNSGGELRIV 302 (343)
T ss_dssp EEC----STTTTCC-----SCEEEEEECCC--CCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEc----ccccccc-----CCeeEEEECCC--cccCccCCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 321 2222111 11245555555 44321 23345566665 668999776664
No 145
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=58.75 E-value=32 Score=32.31 Aligned_cols=135 Identities=12% Similarity=0.115 Sum_probs=67.0
Q ss_pred eeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHH-cCC-ceEEEEeecCCcccc
Q 047247 184 KLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARL-MGV-PFEFKVITGLNRLVE 261 (386)
Q Consensus 184 ~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~-lgi-pFeF~~v~~~~~~e~ 261 (386)
.-+|+|+|.|.|. +...|+.++ |.-+||+|+... ..++.+.+++...... ++- .++|..- +..+
T Consensus 84 ~~~VLdiG~G~G~----~~~~l~~~~---~~~~V~~VDid~---~vi~~ar~~~~~~~~~~~~~~rv~~~~~----D~~~ 149 (294)
T 3adn_A 84 AKHVLIIGGGDGA----MLREVTRHK---NVESITMVEIDA---GVVSFCRQYLPNHNAGSYDDPRFKLVID----DGVN 149 (294)
T ss_dssp CCEEEEESCTTCH----HHHHHHTCT---TCCEEEEECSCT---THHHHHHHHCHHHHSSCTTCTTCCEECS----CSCC
T ss_pred CCEEEEEeCChhH----HHHHHHhCC---CCCEEEEEECCH---HHHHHHHHhhhhcccccccCCceEEEEC----hHHH
Confidence 3479999999984 555666653 457999998632 2455555555444311 111 2333221 1111
Q ss_pred ccccccccCCCceEEEeecccccccccch--HHHHHHHH-HhcCCcEEEEeeecCCCCCCccchHHHHHHHHHHHHHHHH
Q 047247 262 LTKGTLGVKEDEAVAVNCIGALRRVAVEE--RGAVIQMF-QSLKPKVVTIVEEEADLTSSRYDFVKCFEECLRFYTLYFE 338 (386)
Q Consensus 262 l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~--r~~vL~~i-r~L~P~vvvlvE~ea~~n~~~~~F~~RF~eaL~~YsalFD 338 (386)
.-.. .-..=++|++++.... ..... ...+++.+ +.|+|.-++++.-++-...+ +.+.+.+.....+|.
T Consensus 150 ~l~~--~~~~fDvIi~D~~~p~--~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~-----~~~~~~~~~l~~~F~ 220 (294)
T 3adn_A 150 FVNQ--TSQTFDVIISDCTDPI--GPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQ-----EEAIDSHRKLSHYFS 220 (294)
T ss_dssp ---C--CCCCEEEEEECC------------CCHHHHHHHHHTEEEEEEEEEEEEECSSCC-----HHHHHHHHHHHHHCS
T ss_pred HHhh--cCCCccEEEECCCCcc--CcchhccHHHHHHHHHHhcCCCCEEEEecCCcccch-----HHHHHHHHHHHHHCC
Confidence 1000 0112257777665321 11111 14577665 56899988888654333333 445555555556666
Q ss_pred Hhh
Q 047247 339 MLE 341 (386)
Q Consensus 339 sLd 341 (386)
...
T Consensus 221 ~v~ 223 (294)
T 3adn_A 221 DVG 223 (294)
T ss_dssp EEE
T ss_pred CeE
Confidence 554
No 146
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=57.50 E-value=68 Score=31.73 Aligned_cols=94 Identities=19% Similarity=0.193 Sum_probs=56.5
Q ss_pred EEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEeecCCcccccccc
Q 047247 186 HIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVITGLNRLVELTKG 265 (386)
Q Consensus 186 HIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v~~~~~~e~l~~~ 265 (386)
.|+|+|.|.|. +...||.+ + -+++||+. +...++.+.++ |+..|+..+|..- +++++.+.
T Consensus 293 ~VLDlgcG~G~----~sl~la~~--~---~~V~gvD~---s~~ai~~A~~n----~~~ngl~v~~~~~----d~~~~~~~ 352 (425)
T 2jjq_A 293 KILDMYSGVGT----FGIYLAKR--G---FNVKGFDS---NEFAIEMARRN----VEINNVDAEFEVA----SDREVSVK 352 (425)
T ss_dssp EEEEETCTTTH----HHHHHHHT--T---CEEEEEES---CHHHHHHHHHH----HHHHTCCEEEEEC----CTTTCCCT
T ss_pred EEEEeeccchH----HHHHHHHc--C---CEEEEEEC---CHHHHHHHHHH----HHHcCCcEEEEEC----ChHHcCcc
Confidence 68999999885 33345554 2 38999985 33345444433 3445776554433 34444322
Q ss_pred ccccCCCceEEEeecccccccccchHHHHHHHHHhcCCcEEEEee
Q 047247 266 TLGVKEDEAVAVNCIGALRRVAVEERGAVIQMFQSLKPKVVTIVE 310 (386)
Q Consensus 266 ~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~ir~L~P~vvvlvE 310 (386)
.=++|++|-.. ....+.+++.++.|+|+-++.+.
T Consensus 353 -----~fD~Vv~dPPr------~g~~~~~~~~l~~l~p~givyvs 386 (425)
T 2jjq_A 353 -----GFDTVIVDPPR------AGLHPRLVKRLNREKPGVIVYVS 386 (425)
T ss_dssp -----TCSEEEECCCT------TCSCHHHHHHHHHHCCSEEEEEE
T ss_pred -----CCCEEEEcCCc------cchHHHHHHHHHhcCCCcEEEEE
Confidence 23567765442 12234689999999999888773
No 147
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=57.47 E-value=27 Score=33.15 Aligned_cols=113 Identities=6% Similarity=0.056 Sum_probs=58.2
Q ss_pred eEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHc-CCceEEEEeecCCcccccc
Q 047247 185 LHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLM-GVPFEFKVITGLNRLVELT 263 (386)
Q Consensus 185 VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~l-gipFeF~~v~~~~~~e~l~ 263 (386)
-.|+|+|.|.|. +...++.++ |..+||+|+.. ...++.+.+++.+++..+ +-.++|..- ++.+.-
T Consensus 118 ~~VLdiG~G~G~----~~~~l~~~~---~~~~v~~vDis---~~~l~~ar~~~~~~~~~~~~~~v~~~~~----D~~~~l 183 (321)
T 2pt6_A 118 KNVLVVGGGDGG----IIRELCKYK---SVENIDICEID---ETVIEVSKIYFKNISCGYEDKRVNVFIE----DASKFL 183 (321)
T ss_dssp CEEEEEECTTCH----HHHHHTTCT---TCCEEEEEESC---HHHHHHHHHHCTTTSGGGGSTTEEEEES----CHHHHH
T ss_pred CEEEEEcCCccH----HHHHHHHcC---CCCEEEEEECC---HHHHHHHHHHHHhhccccCCCcEEEEEc----cHHHHH
Confidence 479999999984 555666553 45799999852 234544444443321122 112333322 222211
Q ss_pred ccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEeeecC
Q 047247 264 KGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIVEEEA 313 (386)
Q Consensus 264 ~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlvE~ea 313 (386)
.. . -..=+.|++|.....+....--...+++.+ +.|+|.-+++++...
T Consensus 184 ~~-~-~~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 184 EN-V-TNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp HH-C-CSCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred hh-c-CCCceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 00 0 011257777764222211000114667665 568999988887543
No 148
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=54.65 E-value=1.2e+02 Score=29.30 Aligned_cols=104 Identities=11% Similarity=0.004 Sum_probs=58.1
Q ss_pred ceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEeecCCccccc
Q 047247 183 TKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVITGLNRLVEL 262 (386)
Q Consensus 183 ~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v~~~~~~e~l 262 (386)
+.-+|+|+|.|.|.- ...|+.+ + .+||||+. +...++.+.++ ++..|+..+|..- ++.+.
T Consensus 233 ~~~~VLDlGcG~G~~----~~~la~~--g---~~V~gvDi---s~~al~~A~~n----~~~~~~~v~~~~~----D~~~~ 292 (381)
T 3dmg_A 233 RGRQVLDLGAGYGAL----TLPLARM--G---AEVVGVED---DLASVLSLQKG----LEANALKAQALHS----DVDEA 292 (381)
T ss_dssp TTCEEEEETCTTSTT----HHHHHHT--T---CEEEEEES---BHHHHHHHHHH----HHHTTCCCEEEEC----STTTT
T ss_pred CCCEEEEEeeeCCHH----HHHHHHc--C---CEEEEEEC---CHHHHHHHHHH----HHHcCCCeEEEEc----chhhc
Confidence 445899999999864 3334444 2 39999995 23345444443 3455666665543 23333
Q ss_pred cccccccCCCceEEEeecccccc---cccchHHHHHHH-HHhcCCcEEEEeee
Q 047247 263 TKGTLGVKEDEAVAVNCIGALRR---VAVEERGAVIQM-FQSLKPKVVTIVEE 311 (386)
Q Consensus 263 ~~~~L~~~~~EaLaVN~~~~Lh~---l~~~~r~~vL~~-ir~L~P~vvvlvE~ 311 (386)
... -..=+.|+.|..+ |+ ........+++. .+.|+|.-.+++..
T Consensus 293 ~~~---~~~fD~Ii~npp~--~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 293 LTE---EARFDIIVTNPPF--HVGGAVILDVAQAFVNVAAARLRPGGVFFLVS 340 (381)
T ss_dssp SCT---TCCEEEEEECCCC--CTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccc---CCCeEEEEECCch--hhcccccHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 221 1122466666554 44 222334455554 56789997777653
No 149
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=54.30 E-value=20 Score=34.14 Aligned_cols=107 Identities=16% Similarity=0.105 Sum_probs=58.4
Q ss_pred HHHhhc--CCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEE
Q 047247 174 AILEAL--DGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFK 251 (386)
Q Consensus 174 aILeA~--~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~ 251 (386)
.|++.+ .=.+.-+|+|+|.|.|. +...|+.+. |.+++|+++.+ ..++ .|+.+. .++|.
T Consensus 182 ~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~----~~~~--------~a~~~~-~v~~~ 241 (358)
T 1zg3_A 182 LVLQENKRVFEGLESLVDVGGGTGG----VTKLIHEIF---PHLKCTVFDQP----QVVG--------NLTGNE-NLNFV 241 (358)
T ss_dssp HHHHHTHHHHHTCSEEEEETCTTSH----HHHHHHHHC---TTSEEEEEECH----HHHS--------SCCCCS-SEEEE
T ss_pred HHHHhcchhccCCCEEEEECCCcCH----HHHHHHHHC---CCCeEEEeccH----HHHh--------hcccCC-CcEEE
Confidence 466665 11233589999999984 455555543 46899999852 1222 122211 14443
Q ss_pred EeecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCC---c-EEEEeeec
Q 047247 252 VITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKP---K-VVTIVEEE 312 (386)
Q Consensus 252 ~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P---~-vvvlvE~e 312 (386)
.- ++.+ . +. ..++++. ...||++.......+|+.+ +.|+| . .++++|.-
T Consensus 242 ~~----d~~~-~---~~--~~D~v~~--~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~ 295 (358)
T 1zg3_A 242 GG----DMFK-S---IP--SADAVLL--KWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDIS 295 (358)
T ss_dssp EC----CTTT-C---CC--CCSEEEE--ESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECE
T ss_pred eC----ccCC-C---CC--CceEEEE--cccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEec
Confidence 32 2322 1 11 2355544 4558888654455777776 55799 4 45555654
No 150
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=53.90 E-value=51 Score=30.45 Aligned_cols=41 Identities=12% Similarity=0.083 Sum_probs=28.6
Q ss_pred HHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEecc
Q 047247 173 GAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVT 222 (386)
Q Consensus 173 qaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~ 222 (386)
+.|++++.-.+.-+|+|+|.|.|.--..|.+. + -++|||+.
T Consensus 18 ~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~------~---~~v~~vD~ 58 (285)
T 1zq9_A 18 NSIIDKAALRPTDVVLEVGPGTGNMTVKLLEK------A---KKVVACEL 58 (285)
T ss_dssp HHHHHHTCCCTTCEEEEECCTTSTTHHHHHHH------S---SEEEEEES
T ss_pred HHHHHhcCCCCCCEEEEEcCcccHHHHHHHhh------C---CEEEEEEC
Confidence 45566665445568999999999866555543 2 28999995
No 151
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=53.86 E-value=21 Score=31.83 Aligned_cols=111 Identities=13% Similarity=0.129 Sum_probs=56.8
Q ss_pred hhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc---eEEEEe
Q 047247 177 EALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP---FEFKVI 253 (386)
Q Consensus 177 eA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip---FeF~~v 253 (386)
......+.-.|+|+|.+.|.-=..|.+++ ||.-+||+|+.. ...++.+ .+.++..|+. ++|..-
T Consensus 50 ~~~~~~~~~~vLdiG~G~G~~~~~la~~~------~~~~~v~~vD~~---~~~~~~a----~~~~~~~g~~~~~i~~~~g 116 (221)
T 3dr5_A 50 ATTNGNGSTGAIAITPAAGLVGLYILNGL------ADNTTLTCIDPE---SEHQRQA----KALFREAGYSPSRVRFLLS 116 (221)
T ss_dssp HHSCCTTCCEEEEESTTHHHHHHHHHHHS------CTTSEEEEECSC---HHHHHHH----HHHHHHTTCCGGGEEEECS
T ss_pred HhhCCCCCCCEEEEcCCchHHHHHHHHhC------CCCCEEEEEECC---HHHHHHH----HHHHHHcCCCcCcEEEEEc
Confidence 33444445688999998876444444433 234699999952 2233333 3445566765 444332
Q ss_pred ecCCccccccccccccCCCceEEEeecccccccccchHHHHHHH-HHhcCCcEEEEeeec
Q 047247 254 TGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQM-FQSLKPKVVTIVEEE 312 (386)
Q Consensus 254 ~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~-ir~L~P~vvvlvE~e 312 (386)
+..++-+. +.-..=+.|+++.. ......+++. .+-|+|.-+++++.-
T Consensus 117 ----da~~~l~~-~~~~~fD~V~~d~~-------~~~~~~~l~~~~~~LkpGG~lv~dn~ 164 (221)
T 3dr5_A 117 ----RPLDVMSR-LANDSYQLVFGQVS-------PMDLKALVDAAWPLLRRGGALVLADA 164 (221)
T ss_dssp ----CHHHHGGG-SCTTCEEEEEECCC-------TTTHHHHHHHHHHHEEEEEEEEETTT
T ss_pred ----CHHHHHHH-hcCCCcCeEEEcCc-------HHHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 22222111 10011134444432 1223345544 477899999888543
No 152
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=53.81 E-value=33 Score=31.74 Aligned_cols=110 Identities=7% Similarity=0.081 Sum_probs=56.6
Q ss_pred eEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHc-CCceEEEEeecCCcccccc
Q 047247 185 LHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLM-GVPFEFKVITGLNRLVELT 263 (386)
Q Consensus 185 VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~l-gipFeF~~v~~~~~~e~l~ 263 (386)
-+|+|+|.|.|. +...++.++ |.-+||+|+.. ...++...+++...+..+ +-.+++..- +..+.-
T Consensus 80 ~~VLdiG~G~G~----~~~~l~~~~---~~~~v~~vDid---~~~i~~a~~~~~~~~~~~~~~~v~~~~~----D~~~~l 145 (283)
T 2i7c_A 80 KNVLVVGGGDGG----IIRELCKYK---SVENIDICEID---ETVIEVSKIYFKNISCGYEDKRVNVFIE----DASKFL 145 (283)
T ss_dssp CEEEEEECTTSH----HHHHHTTCT---TCCEEEEEESC---HHHHHHHHHHCTTTSGGGGSTTEEEEES----CHHHHH
T ss_pred CeEEEEeCCcCH----HHHHHHHcC---CCCEEEEEECC---HHHHHHHHHHhHHhccccCCCcEEEEEC----ChHHHH
Confidence 479999999874 556666553 45799999852 234444444433222112 112343322 222211
Q ss_pred ccccccCCCceEEEeecccccccccchH--HHHHHHH-HhcCCcEEEEeeec
Q 047247 264 KGTLGVKEDEAVAVNCIGALRRVAVEER--GAVIQMF-QSLKPKVVTIVEEE 312 (386)
Q Consensus 264 ~~~L~~~~~EaLaVN~~~~Lh~l~~~~r--~~vL~~i-r~L~P~vvvlvE~e 312 (386)
.. . -..=++|++++....+ ..... ..+++.+ +.|+|.-++++...
T Consensus 146 ~~-~-~~~fD~Ii~d~~~~~~--~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 146 EN-V-TNTYDVIIVDSSDPIG--PAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp HH-C-CSCEEEEEEECCCTTT--GGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred Hh-C-CCCceEEEEcCCCCCC--cchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 10 0 1112577776643222 11111 5677776 56899988887543
No 153
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=53.68 E-value=35 Score=28.87 Aligned_cols=32 Identities=16% Similarity=0.004 Sum_probs=21.5
Q ss_pred ceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEecc
Q 047247 183 TKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVT 222 (386)
Q Consensus 183 ~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~ 222 (386)
+.-.|+|+|.|.|.- ...|+.+ |+. ++|||+.
T Consensus 42 ~~~~vLdiGcG~G~~----~~~l~~~--~~~--~v~~~D~ 73 (215)
T 2pxx_A 42 PEDRILVLGCGNSAL----SYELFLG--GFP--NVTSVDY 73 (215)
T ss_dssp TTCCEEEETCTTCSH----HHHHHHT--TCC--CEEEEES
T ss_pred CCCeEEEECCCCcHH----HHHHHHc--CCC--cEEEEeC
Confidence 345799999998753 3344444 332 8999985
No 154
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=53.65 E-value=87 Score=28.72 Aligned_cols=133 Identities=11% Similarity=0.052 Sum_probs=69.6
Q ss_pred eeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCC-ceEEEEeecCCcccc-
Q 047247 184 KLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGV-PFEFKVITGLNRLVE- 261 (386)
Q Consensus 184 ~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgi-pFeF~~v~~~~~~e~- 261 (386)
.-+|+|+|.|.| .+...++.++ |.-+||+|+. ....++.+.+++.+++..++- .+++..- +..+
T Consensus 76 ~~~VLdiG~G~G----~~~~~l~~~~---~~~~v~~vEi---d~~~v~~ar~~~~~~~~~~~~~rv~v~~~----D~~~~ 141 (275)
T 1iy9_A 76 PEHVLVVGGGDG----GVIREILKHP---SVKKATLVDI---DGKVIEYSKKFLPSIAGKLDDPRVDVQVD----DGFMH 141 (275)
T ss_dssp CCEEEEESCTTC----HHHHHHTTCT---TCSEEEEEES---CHHHHHHHHHHCHHHHTTTTSTTEEEEES----CSHHH
T ss_pred CCEEEEECCchH----HHHHHHHhCC---CCceEEEEEC---CHHHHHHHHHHhHhhccccCCCceEEEEC----cHHHH
Confidence 357999999998 4556666653 3579999985 233555556666555433322 2333322 1111
Q ss_pred ccccccccCCCceEEEeecccccccccc--hHHHHHHHH-HhcCCcEEEEeeecCCCCCCccch-HHHHHHHHHHHHHHH
Q 047247 262 LTKGTLGVKEDEAVAVNCIGALRRVAVE--ERGAVIQMF-QSLKPKVVTIVEEEADLTSSRYDF-VKCFEECLRFYTLYF 337 (386)
Q Consensus 262 l~~~~L~~~~~EaLaVN~~~~Lh~l~~~--~r~~vL~~i-r~L~P~vvvlvE~ea~~n~~~~~F-~~RF~eaL~~YsalF 337 (386)
+... -..=++|+++... +..... -...+++.+ +.|+|.-++++.... + .+ .+.+.+.+.....+|
T Consensus 142 l~~~---~~~fD~Ii~d~~~--~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~----~--~~~~~~~~~~~~~l~~~F 210 (275)
T 1iy9_A 142 IAKS---ENQYDVIMVDSTE--PVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDN----P--WFTPELITNVQRDVKEIF 210 (275)
T ss_dssp HHTC---CSCEEEEEESCSS--CCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCC----T--TTCHHHHHHHHHHHHTTC
T ss_pred HhhC---CCCeeEEEECCCC--CCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC----c--cccHHHHHHHHHHHHHhC
Confidence 1110 0122577776643 211111 124566655 668999888886422 2 11 345555555555555
Q ss_pred HHhh
Q 047247 338 EMLE 341 (386)
Q Consensus 338 DsLd 341 (386)
....
T Consensus 211 ~~v~ 214 (275)
T 1iy9_A 211 PITK 214 (275)
T ss_dssp SEEE
T ss_pred CCeE
Confidence 5433
No 155
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=53.59 E-value=60 Score=29.97 Aligned_cols=107 Identities=12% Similarity=0.043 Sum_probs=57.0
Q ss_pred eEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc--eEEEEeecCCccccc
Q 047247 185 LHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP--FEFKVITGLNRLVEL 262 (386)
Q Consensus 185 VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip--FeF~~v~~~~~~e~l 262 (386)
-.|+|+|.|.|. +.-.|+.+ |..++|||+. +...++.+.++ ++..|+. ++|..- ++.+.
T Consensus 125 ~~vLDlG~GsG~----~~~~la~~----~~~~v~~vDi---s~~al~~A~~n----~~~~~l~~~v~~~~~----D~~~~ 185 (284)
T 1nv8_A 125 KTVADIGTGSGA----IGVSVAKF----SDAIVFATDV---SSKAVEIARKN----AERHGVSDRFFVRKG----EFLEP 185 (284)
T ss_dssp CEEEEESCTTSH----HHHHHHHH----SSCEEEEEES---CHHHHHHHHHH----HHHTTCTTSEEEEES----STTGG
T ss_pred CEEEEEeCchhH----HHHHHHHC----CCCEEEEEEC---CHHHHHHHHHH----HHHcCCCCceEEEEC----cchhh
Confidence 479999999984 44445544 3479999995 23345444433 4556775 555543 34332
Q ss_pred cccccccCCCceEEEeeccccc--cc----ccchHH---------HHHH-HH-HhcCCcEEEEeeec
Q 047247 263 TKGTLGVKEDEAVAVNCIGALR--RV----AVEERG---------AVIQ-MF-QSLKPKVVTIVEEE 312 (386)
Q Consensus 263 ~~~~L~~~~~EaLaVN~~~~Lh--~l----~~~~r~---------~vL~-~i-r~L~P~vvvlvE~e 312 (386)
-+.. ..+-+.|+.|-.+.-. ++ ...|.. .+++ .+ +.++|.-++++|-.
T Consensus 186 ~~~~--f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~ 250 (284)
T 1nv8_A 186 FKEK--FASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIG 250 (284)
T ss_dssp GGGG--TTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECC
T ss_pred cccc--cCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 1111 1111677777433210 00 012221 3444 45 67899988888753
No 156
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=53.15 E-value=21 Score=31.44 Aligned_cols=100 Identities=9% Similarity=0.116 Sum_probs=50.9
Q ss_pred EEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc--eEEEEeecCCcccccc
Q 047247 186 HIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP--FEFKVITGLNRLVELT 263 (386)
Q Consensus 186 HIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip--FeF~~v~~~~~~e~l~ 263 (386)
.|+|+|.|.|.-=. .|+.+- |..+||+|+.. ...++.+.++ ++..|+. ++|..- ++.+.-
T Consensus 57 ~vLdiG~G~G~~~~----~la~~~---~~~~v~~vD~~---~~~~~~a~~~----~~~~~~~~~v~~~~~----d~~~~~ 118 (233)
T 2gpy_A 57 RILEIGTAIGYSAI----RMAQAL---PEATIVSIERD---ERRYEEAHKH----VKALGLESRIELLFG----DALQLG 118 (233)
T ss_dssp EEEEECCTTSHHHH----HHHHHC---TTCEEEEECCC---HHHHHHHHHH----HHHTTCTTTEEEECS----CGGGSH
T ss_pred EEEEecCCCcHHHH----HHHHHC---CCCEEEEEECC---HHHHHHHHHH----HHHcCCCCcEEEEEC----CHHHHH
Confidence 79999999875322 333332 23699999852 2344433333 3445653 444322 233221
Q ss_pred ccccccCCCceEEEeecccccccccchHHHHHHH-HHhcCCcEEEEee
Q 047247 264 KGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQM-FQSLKPKVVTIVE 310 (386)
Q Consensus 264 ~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~-ir~L~P~vvvlvE 310 (386)
+....-..=+.|+++... + . ...+|+. .+.|+|.-+++++
T Consensus 119 ~~~~~~~~fD~I~~~~~~--~----~-~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 119 EKLELYPLFDVLFIDAAK--G----Q-YRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp HHHTTSCCEEEEEEEGGG--S----C-HHHHHHHHGGGEEEEEEEEEE
T ss_pred HhcccCCCccEEEECCCH--H----H-HHHHHHHHHHHcCCCeEEEEE
Confidence 110000112456655542 1 2 3445554 5678999888875
No 157
>2qn6_B Translation initiation factor 2 alpha subunit; initiation of translation, GTP-binding, nucleotide-binding, protein biosynthesis; HET: GDP; 2.15A {Sulfolobus solfataricus} SCOP: d.58.51.1 PDB: 2qmu_B* 3qsy_B*
Probab=52.45 E-value=18 Score=28.64 Aligned_cols=41 Identities=17% Similarity=0.185 Sum_probs=31.9
Q ss_pred CCCeeEEEEeccccc-hHHHHHHHHHHHHHHHHHcCCceEEE
Q 047247 211 ETPHLKLTVVVTVSL-VRLVMKEIGQRMEKFARLMGVPFEFK 251 (386)
Q Consensus 211 gpP~LRIT~I~~~~~-~~~~l~etg~rL~~fA~~lgipFeF~ 251 (386)
|||.-|||...+.-. ....|+++-+.+.+..+..|..|+|+
T Consensus 50 gaP~Y~i~~~~~D~k~ge~~L~~ai~~i~~~i~~~gG~~~v~ 91 (93)
T 2qn6_B 50 GAPRYRVDVVGTNPKEASEALNQIISNLIKIGKEENVDISVV 91 (93)
T ss_dssp STTEEEEEEEESCHHHHHHHHHHHHHHHHHHHHHTTEEEEEC
T ss_pred cCCeEEEEEEecCHHHHHHHHHHHHHHHHHHHHHhCCEEEEE
Confidence 778777777765321 23578999999999999999999875
No 158
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=52.03 E-value=86 Score=27.55 Aligned_cols=108 Identities=12% Similarity=0.048 Sum_probs=56.2
Q ss_pred HHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc--eEEE
Q 047247 174 AILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP--FEFK 251 (386)
Q Consensus 174 aILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip--FeF~ 251 (386)
.|++.+.-...-.|+|+|.|.|.--..|.+.+ . |..++++++.. ...++.+.+++ +..|++ .+|.
T Consensus 84 ~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~---~---~~~~v~~~D~~---~~~~~~a~~~~----~~~~~~~~v~~~ 150 (255)
T 3mb5_A 84 LIVAYAGISPGDFIVEAGVGSGALTLFLANIV---G---PEGRVVSYEIR---EDFAKLAWENI----KWAGFDDRVTIK 150 (255)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHH---C---TTSEEEEECSC---HHHHHHHHHHH----HHHTCTTTEEEE
T ss_pred HHHHhhCCCCCCEEEEecCCchHHHHHHHHHh---C---CCeEEEEEecC---HHHHHHHHHHH----HHcCCCCceEEE
Confidence 55566655555679999999985333333332 1 34689999852 23454444433 344655 4443
Q ss_pred EeecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHHHhcCCcEEEEee
Q 047247 252 VITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMFQSLKPKVVTIVE 310 (386)
Q Consensus 252 ~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~ir~L~P~vvvlvE 310 (386)
.- ++.+. +.-..=+.|+.|. ..+...+-...+.|+|.-.+++.
T Consensus 151 ~~----d~~~~----~~~~~~D~v~~~~--------~~~~~~l~~~~~~L~~gG~l~~~ 193 (255)
T 3mb5_A 151 LK----DIYEG----IEEENVDHVILDL--------PQPERVVEHAAKALKPGGFFVAY 193 (255)
T ss_dssp CS----CGGGC----CCCCSEEEEEECS--------SCGGGGHHHHHHHEEEEEEEEEE
T ss_pred EC----chhhc----cCCCCcCEEEECC--------CCHHHHHHHHHHHcCCCCEEEEE
Confidence 22 23322 1111113443322 23444444555778998777663
No 159
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=51.96 E-value=32 Score=33.76 Aligned_cols=99 Identities=12% Similarity=0.204 Sum_probs=53.6
Q ss_pred EEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEeecCCcccccccc
Q 047247 186 HIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVITGLNRLVELTKG 265 (386)
Q Consensus 186 HIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v~~~~~~e~l~~~ 265 (386)
+|+|+|.|.| +-++ +|.|.|. -|++||+.. + .+ + ...+.++.-|+.=....+.. +++++...
T Consensus 86 ~VLDvG~GtG--iLs~---~Aa~aGA---~~V~ave~s-~---~~-~---~a~~~~~~n~~~~~i~~i~~--~~~~~~lp 147 (376)
T 4hc4_A 86 TVLDVGAGTG--ILSI---FCAQAGA---RRVYAVEAS-A---IW-Q---QAREVVRFNGLEDRVHVLPG--PVETVELP 147 (376)
T ss_dssp EEEEETCTTS--HHHH---HHHHTTC---SEEEEEECS-T---TH-H---HHHHHHHHTTCTTTEEEEES--CTTTCCCS
T ss_pred EEEEeCCCcc--HHHH---HHHHhCC---CEEEEEeCh-H---HH-H---HHHHHHHHcCCCceEEEEee--eeeeecCC
Confidence 5889988887 3344 4445443 389999852 1 12 2 22344555666544555643 56666432
Q ss_pred ccccCCCceEEEeecc-cccccccchHHHHHHHH-HhcCCcEEEE
Q 047247 266 TLGVKEDEAVAVNCIG-ALRRVAVEERGAVIQMF-QSLKPKVVTI 308 (386)
Q Consensus 266 ~L~~~~~EaLaVN~~~-~Lh~l~~~~r~~vL~~i-r~L~P~vvvl 308 (386)
.+=++|+-+++. .|.+ .+..+.+|... |-|+|.-+++
T Consensus 148 ----e~~DvivsE~~~~~l~~--e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 148 ----EQVDAIVSEWMGYGLLH--ESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp ----SCEEEEECCCCBTTBTT--TCSHHHHHHHHHHHEEEEEEEE
T ss_pred ----ccccEEEeecccccccc--cchhhhHHHHHHhhCCCCceEC
Confidence 111233333332 1222 34577788777 5578886664
No 160
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=51.61 E-value=64 Score=27.30 Aligned_cols=31 Identities=13% Similarity=-0.081 Sum_probs=22.1
Q ss_pred eeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEecc
Q 047247 184 KLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVT 222 (386)
Q Consensus 184 ~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~ 222 (386)
.-.|+|+|.|.|. +...|+.++ .-++|||+.
T Consensus 52 ~~~vlD~gcG~G~----~~~~l~~~~----~~~v~~vD~ 82 (200)
T 1ne2_A 52 GRSVIDAGTGNGI----LACGSYLLG----AESVTAFDI 82 (200)
T ss_dssp TSEEEEETCTTCH----HHHHHHHTT----BSEEEEEES
T ss_pred CCEEEEEeCCccH----HHHHHHHcC----CCEEEEEEC
Confidence 3479999999986 444555551 247999995
No 161
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=50.77 E-value=16 Score=32.70 Aligned_cols=104 Identities=10% Similarity=-0.011 Sum_probs=55.5
Q ss_pred eeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEeecCCcccccc
Q 047247 184 KLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVITGLNRLVELT 263 (386)
Q Consensus 184 ~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v~~~~~~e~l~ 263 (386)
--+|+|+|.|.|. ....|+.+. | -++|||+.. ...+ ++..+.++..+....|... +++++.
T Consensus 61 G~rVLdiG~G~G~----~~~~~~~~~---~-~~v~~id~~---~~~~----~~a~~~~~~~~~~~~~~~~----~a~~~~ 121 (236)
T 3orh_A 61 GGRVLEVGFGMAI----AASKVQEAP---I-DEHWIIECN---DGVF----QRLRDWAPRQTHKVIPLKG----LWEDVA 121 (236)
T ss_dssp CEEEEEECCTTSH----HHHHHTTSC---E-EEEEEEECC---HHHH----HHHHHHGGGCSSEEEEEES----CHHHHG
T ss_pred CCeEEEECCCccH----HHHHHHHhC---C-cEEEEEeCC---HHHH----HHHHHHHhhCCCceEEEee----hHHhhc
Confidence 3479999999883 344555542 2 378999852 2233 3444566667766655432 344443
Q ss_pred ccccccCCCceEEEee---cccccccccchHHHHHHH-HHhcCCcEEEEe
Q 047247 264 KGTLGVKEDEAVAVNC---IGALRRVAVEERGAVIQM-FQSLKPKVVTIV 309 (386)
Q Consensus 264 ~~~L~~~~~EaLaVN~---~~~Lh~l~~~~r~~vL~~-ir~L~P~vvvlv 309 (386)
.. +.-..=+.+.+.. ...++|+ ...+.+++. .|-|+|.-+.+.
T Consensus 122 ~~-~~~~~FD~i~~D~~~~~~~~~~~--~~~~~~~~e~~rvLkPGG~l~f 168 (236)
T 3orh_A 122 PT-LPDGHFDGILYDTYPLSEETWHT--HQFNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp GG-SCTTCEEEEEECCCCCBGGGTTT--HHHHHHHHTHHHHEEEEEEEEE
T ss_pred cc-ccccCCceEEEeeeecccchhhh--cchhhhhhhhhheeCCCCEEEE
Confidence 22 1111113443332 3334443 235567764 466899976654
No 162
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=50.14 E-value=39 Score=31.12 Aligned_cols=105 Identities=5% Similarity=0.012 Sum_probs=54.2
Q ss_pred eEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHc--------CCceEEEEeecC
Q 047247 185 LHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLM--------GVPFEFKVITGL 256 (386)
Q Consensus 185 VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~l--------gipFeF~~v~~~ 256 (386)
-.|+|+|.|.| .+...++.+ |.-+||+|+.. ...++.+.+++ +.+..+ +-.++|..-
T Consensus 77 ~~VLdiG~G~G----~~~~~l~~~----~~~~v~~vDid---~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~--- 141 (281)
T 1mjf_A 77 KRVLVIGGGDG----GTVREVLQH----DVDEVIMVEID---EDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIG--- 141 (281)
T ss_dssp CEEEEEECTTS----HHHHHHTTS----CCSEEEEEESC---HHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEES---
T ss_pred CeEEEEcCCcC----HHHHHHHhC----CCCEEEEEECC---HHHHHHHHHHH-hhccccccccccCCCCcEEEEEC---
Confidence 47999999998 456666666 23699999852 23454444444 321111 112333321
Q ss_pred Ccccc-ccccccccCCCceEEEeecccccccccch--HHHHHHHH-HhcCCcEEEEeee
Q 047247 257 NRLVE-LTKGTLGVKEDEAVAVNCIGALRRVAVEE--RGAVIQMF-QSLKPKVVTIVEE 311 (386)
Q Consensus 257 ~~~e~-l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~--r~~vL~~i-r~L~P~vvvlvE~ 311 (386)
+..+ +.. -..=+.|+++...... .... ...+++.+ +.|+|.-++++..
T Consensus 142 -D~~~~l~~----~~~fD~Ii~d~~~~~~--~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 142 -DGFEFIKN----NRGFDVIIADSTDPVG--PAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp -CHHHHHHH----CCCEEEEEEECCCCC-------TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred -chHHHhcc----cCCeeEEEECCCCCCC--cchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 2211 111 0112567776653211 1111 24566665 5689998888864
No 163
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=50.04 E-value=92 Score=27.24 Aligned_cols=47 Identities=11% Similarity=-0.018 Sum_probs=27.9
Q ss_pred CCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHH
Q 047247 180 DGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRM 237 (386)
Q Consensus 180 ~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL 237 (386)
...+.-.|+|+|.|.|.--. .|+.+ ++ .+||||+.. ...++.+.+++
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~----~l~~~--~~--~~v~gvD~s---~~~l~~a~~~~ 99 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQL----LSACE--SF--TEIIVSDYT---DQNLWELQKWL 99 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGG----TTGGG--TE--EEEEEEESC---HHHHHHHHHHH
T ss_pred cccCCCEEEEECCCccHHHH----HHhhc--cc--CeEEEecCC---HHHHHHHHHHH
Confidence 34566789999999985321 23332 22 589999952 23454444443
No 164
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=49.11 E-value=54 Score=30.59 Aligned_cols=86 Identities=10% Similarity=-0.015 Sum_probs=46.3
Q ss_pred HHHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc-eEE
Q 047247 172 NGAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP-FEF 250 (386)
Q Consensus 172 NqaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip-FeF 250 (386)
.+.|++++.-...-.|+|+|.|.|.-- ..|+.+ + -+++||+.. ...++.+.+++ +..|++ ++|
T Consensus 31 ~~~i~~~~~~~~~~~VLDiG~G~G~lt----~~La~~--~---~~v~~vDi~---~~~~~~a~~~~----~~~~~~~v~~ 94 (299)
T 2h1r_A 31 LDKIIYAAKIKSSDIVLEIGCGTGNLT----VKLLPL--A---KKVITIDID---SRMISEVKKRC----LYEGYNNLEV 94 (299)
T ss_dssp HHHHHHHHCCCTTCEEEEECCTTSTTH----HHHTTT--S---SEEEEECSC---HHHHHHHHHHH----HHTTCCCEEC
T ss_pred HHHHHHhcCCCCcCEEEEEcCcCcHHH----HHHHhc--C---CEEEEEECC---HHHHHHHHHHH----HHcCCCceEE
Confidence 345666665445558999999999754 445555 2 389999952 23444443333 334542 333
Q ss_pred EEeecCCccccccccccccCCCceEEEeeccc
Q 047247 251 KVITGLNRLVELTKGTLGVKEDEAVAVNCIGA 282 (386)
Q Consensus 251 ~~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~ 282 (386)
..- ++.++... .-+.|+.|..+.
T Consensus 95 ~~~----D~~~~~~~-----~~D~Vv~n~py~ 117 (299)
T 2h1r_A 95 YEG----DAIKTVFP-----KFDVCTANIPYK 117 (299)
T ss_dssp --------CCSSCCC-----CCSEEEEECCGG
T ss_pred EEC----chhhCCcc-----cCCEEEEcCCcc
Confidence 321 33333322 225777777654
No 165
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=48.59 E-value=62 Score=29.24 Aligned_cols=113 Identities=14% Similarity=0.127 Sum_probs=57.7
Q ss_pred HHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc-eEEEEe
Q 047247 175 ILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP-FEFKVI 253 (386)
Q Consensus 175 ILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip-FeF~~v 253 (386)
+++.+. .+..+|+|+|.|.|.- ...|+.+. |..++|||+. +...++.+.++ ++..|++ .+| +
T Consensus 102 ~l~~~~-~~~~~vLDlG~GsG~~----~~~la~~~---~~~~v~~vD~---s~~~l~~a~~n----~~~~~~~~v~~--~ 164 (276)
T 2b3t_A 102 ALARLP-EQPCRILDLGTGTGAI----ALALASER---PDCEIIAVDR---MPDAVSLAQRN----AQHLAIKNIHI--L 164 (276)
T ss_dssp HHHHSC-SSCCEEEEETCTTSHH----HHHHHHHC---TTSEEEEECS---SHHHHHHHHHH----HHHHTCCSEEE--E
T ss_pred HHHhcc-cCCCEEEEecCCccHH----HHHHHHhC---CCCEEEEEEC---CHHHHHHHHHH----HHHcCCCceEE--E
Confidence 334433 3445899999999853 33444322 3469999995 23345444433 3445665 444 3
Q ss_pred ecCCccccccccccccCCCceEEEeeccc-----------cccccc----------chHHHHHHHH-HhcCCcEEEEee
Q 047247 254 TGLNRLVELTKGTLGVKEDEAVAVNCIGA-----------LRRVAV----------EERGAVIQMF-QSLKPKVVTIVE 310 (386)
Q Consensus 254 ~~~~~~e~l~~~~L~~~~~EaLaVN~~~~-----------Lh~l~~----------~~r~~vL~~i-r~L~P~vvvlvE 310 (386)
.. ++.+..+ -..=+.|+.|-.+. ++|-+. .....+++.+ +-|+|.-++++|
T Consensus 165 ~~--d~~~~~~----~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~ 237 (276)
T 2b3t_A 165 QS--DWFSALA----GQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLE 237 (276)
T ss_dssp CC--STTGGGT----TCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred Ec--chhhhcc----cCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 22 3332211 11225666664431 111110 1224556554 567999888876
No 166
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=47.54 E-value=1.3e+02 Score=27.90 Aligned_cols=45 Identities=22% Similarity=0.215 Sum_probs=31.1
Q ss_pred HHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEecc
Q 047247 173 GAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVT 222 (386)
Q Consensus 173 qaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~ 222 (386)
..|++++.-...-+|+|+|.|.|.-=..|.+....+ ..++|||+.
T Consensus 32 ~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~-----~~~V~avDi 76 (279)
T 3uzu_A 32 DAIVAAIRPERGERMVEIGPGLGALTGPVIARLATP-----GSPLHAVEL 76 (279)
T ss_dssp HHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBT-----TBCEEEEEC
T ss_pred HHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCc-----CCeEEEEEC
Confidence 346777765556689999999998666665543211 356999985
No 167
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=47.23 E-value=50 Score=29.89 Aligned_cols=115 Identities=11% Similarity=-0.056 Sum_probs=57.4
Q ss_pred CceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc--eEEEEeecCCcc
Q 047247 182 ETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP--FEFKVITGLNRL 259 (386)
Q Consensus 182 ~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip--FeF~~v~~~~~~ 259 (386)
.+.-.|+|+|.|.|. +...|+.+. |..+||||+.. ...++.+.+++...+. .|+. ++|..- ++
T Consensus 35 ~~~~~VLDlG~G~G~----~~l~la~~~---~~~~v~gvDi~---~~~~~~a~~n~~~~~~-~~l~~~v~~~~~----D~ 99 (260)
T 2ozv_A 35 DRACRIADLGAGAGA----AGMAVAARL---EKAEVTLYERS---QEMAEFARRSLELPDN-AAFSARIEVLEA----DV 99 (260)
T ss_dssp CSCEEEEECCSSSSH----HHHHHHHHC---TTEEEEEEESS---HHHHHHHHHHTTSGGG-TTTGGGEEEEEC----CT
T ss_pred cCCCEEEEeCChHhH----HHHHHHHhC---CCCeEEEEECC---HHHHHHHHHHHHhhhh-CCCcceEEEEeC----CH
Confidence 345689999999985 333445543 35799999952 2334433333321110 4454 444332 34
Q ss_pred cccccc----ccccCCCceEEEeeccccc--------------ccccchHHHHHHHH-HhcCCcEEEEeee
Q 047247 260 VELTKG----TLGVKEDEAVAVNCIGALR--------------RVAVEERGAVIQMF-QSLKPKVVTIVEE 311 (386)
Q Consensus 260 e~l~~~----~L~~~~~EaLaVN~~~~Lh--------------~l~~~~r~~vL~~i-r~L~P~vvvlvE~ 311 (386)
.++.+. .+.-..=+.|+.|-.+... |......+.+++.+ +-|+|.-.++++.
T Consensus 100 ~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 100 TLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp TCCHHHHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHhhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 444211 1111122577777554322 11112355677665 5689997776643
No 168
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=46.88 E-value=99 Score=28.88 Aligned_cols=89 Identities=12% Similarity=0.023 Sum_probs=45.9
Q ss_pred HHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEE
Q 047247 173 GAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKV 252 (386)
Q Consensus 173 qaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~ 252 (386)
+.+.+.+.-...-.|+|+|.|.|.--..|.+.+ ++.-+|+|++. +...++.+.+ -++..|++ ....
T Consensus 108 ~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~------~~~~~v~avD~---s~~~l~~a~~----~~~~~g~~-~v~~ 173 (315)
T 1ixk_A 108 MYPPVALDPKPGEIVADMAAAPGGKTSYLAQLM------RNDGVIYAFDV---DENRLRETRL----NLSRLGVL-NVIL 173 (315)
T ss_dssp HHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHT------TTCSEEEEECS---CHHHHHHHHH----HHHHHTCC-SEEE
T ss_pred HHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHh------CCCCEEEEEcC---CHHHHHHHHH----HHHHhCCC-eEEE
Confidence 334444443444579999999986443333332 12358999995 2334544444 34556774 2333
Q ss_pred eecCCccccccccccccCCCceEEEeec
Q 047247 253 ITGLNRLVELTKGTLGVKEDEAVAVNCI 280 (386)
Q Consensus 253 v~~~~~~e~l~~~~L~~~~~EaLaVN~~ 280 (386)
+.. +..++.. + -..=+.|++|..
T Consensus 174 ~~~--D~~~~~~--~-~~~fD~Il~d~P 196 (315)
T 1ixk_A 174 FHS--SSLHIGE--L-NVEFDKILLDAP 196 (315)
T ss_dssp ESS--CGGGGGG--G-CCCEEEEEEECC
T ss_pred EEC--Chhhccc--c-cccCCEEEEeCC
Confidence 322 3443332 1 012257777754
No 169
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=46.53 E-value=39 Score=28.99 Aligned_cols=55 Identities=7% Similarity=0.097 Sum_probs=32.6
Q ss_pred HHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHH
Q 047247 174 AILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRM 237 (386)
Q Consensus 174 aILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL 237 (386)
.+++.+.-...-.|+|+|.|.|.--..|.+.. .|.-++|+|+. +...++.+.+++
T Consensus 68 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~------~~~~~v~~vD~---~~~~~~~a~~~~ 122 (215)
T 2yxe_A 68 MMCELLDLKPGMKVLEIGTGCGYHAAVTAEIV------GEDGLVVSIER---IPELAEKAERTL 122 (215)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHH------CTTSEEEEEES---CHHHHHHHHHHH
T ss_pred HHHHhhCCCCCCEEEEECCCccHHHHHHHHHh------CCCCEEEEEeC---CHHHHHHHHHHH
Confidence 34445544445589999999886555444443 23468999985 223444444433
No 170
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=46.47 E-value=74 Score=28.54 Aligned_cols=38 Identities=18% Similarity=0.065 Sum_probs=24.2
Q ss_pred CceEEEeecccccccccc--hHHHHHHHH-HhcCCcEEEEe
Q 047247 272 DEAVAVNCIGALRRVAVE--ERGAVIQMF-QSLKPKVVTIV 309 (386)
Q Consensus 272 ~EaLaVN~~~~Lh~l~~~--~r~~vL~~i-r~L~P~vvvlv 309 (386)
+..=+|-+.+.||++..+ ....+|+.| +-|+|.-.++.
T Consensus 155 ~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~ 195 (263)
T 2a14_A 155 PLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVT 195 (263)
T ss_dssp CCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred CCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 345567777889987532 234566665 55899865554
No 171
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=46.37 E-value=89 Score=28.14 Aligned_cols=109 Identities=17% Similarity=0.051 Sum_probs=54.4
Q ss_pred HHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCC--ceEEE
Q 047247 174 AILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGV--PFEFK 251 (386)
Q Consensus 174 aILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgi--pFeF~ 251 (386)
.|++.+.-...-.|+|+|.|.|. +...|+.+-+ |..++++|+. +...++.+.++ ++..|+ ..+|.
T Consensus 103 ~i~~~~~~~~~~~VLDiG~G~G~----~~~~la~~~~--~~~~v~~vD~---s~~~~~~a~~~----~~~~~~~~~v~~~ 169 (277)
T 1o54_A 103 FIAMMLDVKEGDRIIDTGVGSGA----MCAVLARAVG--SSGKVFAYEK---REEFAKLAESN----LTKWGLIERVTIK 169 (277)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSH----HHHHHHHHTT--TTCEEEEECC---CHHHHHHHHHH----HHHTTCGGGEEEE
T ss_pred HHHHHhCCCCCCEEEEECCcCCH----HHHHHHHHhC--CCcEEEEEEC---CHHHHHHHHHH----HHHcCCCCCEEEE
Confidence 34444443344579999999974 3334444311 3469999985 22344444433 344465 23333
Q ss_pred EeecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHHHhcCCcEEEEeee
Q 047247 252 VITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMFQSLKPKVVTIVEE 311 (386)
Q Consensus 252 ~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~ir~L~P~vvvlvE~ 311 (386)
.- ++.+. +.-..=+.|+.|. ..+...+-...+.|+|.-.+++..
T Consensus 170 ~~----d~~~~----~~~~~~D~V~~~~--------~~~~~~l~~~~~~L~pgG~l~~~~ 213 (277)
T 1o54_A 170 VR----DISEG----FDEKDVDALFLDV--------PDPWNYIDKCWEALKGGGRFATVC 213 (277)
T ss_dssp CC----CGGGC----CSCCSEEEEEECC--------SCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred EC----CHHHc----ccCCccCEEEECC--------cCHHHHHHHHHHHcCCCCEEEEEe
Confidence 21 23322 1101113444432 233343444456789987776654
No 172
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=46.21 E-value=2e+02 Score=27.25 Aligned_cols=98 Identities=13% Similarity=0.127 Sum_probs=51.8
Q ss_pred ceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCC-ceEEEEeecCCcccc
Q 047247 183 TKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGV-PFEFKVITGLNRLVE 261 (386)
Q Consensus 183 ~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgi-pFeF~~v~~~~~~e~ 261 (386)
.-=+|+|+|.|.|. ...++ ||..++ -+||||+. +...++.+.+++ +..|+ .++|.. . +..+
T Consensus 122 ~g~rVLDIGcG~G~-~ta~~--lA~~~g----a~V~gIDi---s~~~l~~Ar~~~----~~~gl~~v~~v~--g--Da~~ 183 (298)
T 3fpf_A 122 RGERAVFIGGGPLP-LTGIL--LSHVYG----MRVNVVEI---EPDIAELSRKVI----EGLGVDGVNVIT--G--DETV 183 (298)
T ss_dssp TTCEEEEECCCSSC-HHHHH--HHHTTC----CEEEEEES---SHHHHHHHHHHH----HHHTCCSEEEEE--S--CGGG
T ss_pred CcCEEEEECCCccH-HHHHH--HHHccC----CEEEEEEC---CHHHHHHHHHHH----HhcCCCCeEEEE--C--chhh
Confidence 33478999988763 34333 344443 58999995 233454444333 34455 344433 2 2333
Q ss_pred ccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEee
Q 047247 262 LTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIVE 310 (386)
Q Consensus 262 l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlvE 310 (386)
+.. ..=++|.++.. . .....+++.+ |.|+|.-.+++.
T Consensus 184 l~d-----~~FDvV~~~a~------~-~d~~~~l~el~r~LkPGG~Lvv~ 221 (298)
T 3fpf_A 184 IDG-----LEFDVLMVAAL------A-EPKRRVFRNIHRYVDTETRIIYR 221 (298)
T ss_dssp GGG-----CCCSEEEECTT------C-SCHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCC-----CCcCEEEECCC------c-cCHHHHHHHHHHHcCCCcEEEEE
Confidence 321 12245555432 1 3344566654 668998777764
No 173
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=45.96 E-value=62 Score=28.29 Aligned_cols=101 Identities=6% Similarity=-0.032 Sum_probs=50.1
Q ss_pred eeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEeecCCcccccc
Q 047247 184 KLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVITGLNRLVELT 263 (386)
Q Consensus 184 ~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v~~~~~~e~l~ 263 (386)
.-.|+|+|.|.|. +...|+.+-+ |.-+++||+.. ...+ +.+.+.|+.. -..+|..- ++++..
T Consensus 78 ~~~vLDlG~G~G~----~~~~la~~~g--~~~~v~gvD~s---~~~i----~~~~~~a~~~-~~v~~~~~----d~~~~~ 139 (233)
T 2ipx_A 78 GAKVLYLGAASGT----TVSHVSDIVG--PDGLVYAVEFS---HRSG----RDLINLAKKR-TNIIPVIE----DARHPH 139 (233)
T ss_dssp TCEEEEECCTTSH----HHHHHHHHHC--TTCEEEEECCC---HHHH----HHHHHHHHHC-TTEEEECS----CTTCGG
T ss_pred CCEEEEEcccCCH----HHHHHHHHhC--CCcEEEEEECC---HHHH----HHHHHHhhcc-CCeEEEEc----ccCChh
Confidence 4479999999975 3334444321 23589999852 1222 2233444442 22333221 233321
Q ss_pred ccccccCCC--ceEEEeecccccccccchHHHHHH-HHHhcCCcEEEEee
Q 047247 264 KGTLGVKED--EAVAVNCIGALRRVAVEERGAVIQ-MFQSLKPKVVTIVE 310 (386)
Q Consensus 264 ~~~L~~~~~--EaLaVN~~~~Lh~l~~~~r~~vL~-~ir~L~P~vvvlvE 310 (386)
.+...++ +.|+.|.. .......++. ..+.|+|.-.+++.
T Consensus 140 --~~~~~~~~~D~V~~~~~------~~~~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 140 --KYRMLIAMVDVIFADVA------QPDQTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp --GGGGGCCCEEEEEECCC------CTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred --hhcccCCcEEEEEEcCC------CccHHHHHHHHHHHHcCCCeEEEEE
Confidence 1111111 34444433 1233344554 77889999777764
No 174
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=45.75 E-value=1.3e+02 Score=24.95 Aligned_cols=27 Identities=19% Similarity=0.297 Sum_probs=21.4
Q ss_pred EEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEecc
Q 047247 186 HIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVT 222 (386)
Q Consensus 186 HIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~ 222 (386)
.|+|+|.|.| .+...|+.+. ++|||+.
T Consensus 26 ~vLD~GcG~G----~~~~~l~~~~------~v~gvD~ 52 (170)
T 3q87_B 26 IVLDLGTSTG----VITEQLRKRN------TVVSTDL 52 (170)
T ss_dssp EEEEETCTTC----HHHHHHTTTS------EEEEEES
T ss_pred eEEEeccCcc----HHHHHHHhcC------cEEEEEC
Confidence 8999999998 3556666653 9999995
No 175
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=44.78 E-value=66 Score=27.99 Aligned_cols=107 Identities=10% Similarity=0.095 Sum_probs=54.2
Q ss_pred eeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc-eEEEEeecCCccccc
Q 047247 184 KLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP-FEFKVITGLNRLVEL 262 (386)
Q Consensus 184 ~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip-FeF~~v~~~~~~e~l 262 (386)
.-.|+|+|.|.|. +...||.+. |..+++||+. +...++.+.++ ++..|++ ++|..- ++.++
T Consensus 39 ~~~vLDiGcG~G~----~~~~la~~~---p~~~v~giD~---s~~~l~~a~~~----~~~~~~~nv~~~~~----d~~~l 100 (213)
T 2fca_A 39 NPIHIEVGTGKGQ----FISGMAKQN---PDINYIGIEL---FKSVIVTAVQK----VKDSEAQNVKLLNI----DADTL 100 (213)
T ss_dssp CCEEEEECCTTSH----HHHHHHHHC---TTSEEEEECS---CHHHHHHHHHH----HHHSCCSSEEEECC----CGGGH
T ss_pred CceEEEEecCCCH----HHHHHHHHC---CCCCEEEEEe---chHHHHHHHHH----HHHcCCCCEEEEeC----CHHHH
Confidence 3469999999985 334455542 3479999995 23344444333 4445664 444322 34433
Q ss_pred cccccccCCC--ceEEEeecccc----cccccchHHHHHHHH-HhcCCcEEEEeee
Q 047247 263 TKGTLGVKED--EAVAVNCIGAL----RRVAVEERGAVIQMF-QSLKPKVVTIVEE 311 (386)
Q Consensus 263 ~~~~L~~~~~--EaLaVN~~~~L----h~l~~~~r~~vL~~i-r~L~P~vvvlvE~ 311 (386)
.. . +.++ +.|.+|...-. |+...--...+|+.+ +-|+|.-.+++.-
T Consensus 101 ~~-~--~~~~~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 101 TD-V--FEPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp HH-H--CCTTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred Hh-h--cCcCCcCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 21 0 1222 34555543211 110000124567766 4589997776653
No 176
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=44.46 E-value=50 Score=28.27 Aligned_cols=37 Identities=14% Similarity=0.144 Sum_probs=23.3
Q ss_pred HHhhcCC-CceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccc
Q 047247 175 ILEALDG-ETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTV 223 (386)
Q Consensus 175 ILeA~~g-~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~ 223 (386)
|++.+.. .+.-+|+|+|.|.|.- ...|+ .++|||+..
T Consensus 58 ~~~~l~~~~~~~~vLDiG~G~G~~----~~~l~--------~~v~~~D~s 95 (215)
T 2zfu_A 58 IARDLRQRPASLVVADFGCGDCRL----ASSIR--------NPVHCFDLA 95 (215)
T ss_dssp HHHHHHTSCTTSCEEEETCTTCHH----HHHCC--------SCEEEEESS
T ss_pred HHHHHhccCCCCeEEEECCcCCHH----HHHhh--------ccEEEEeCC
Confidence 4444432 3345899999999862 23332 589999864
No 177
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=44.12 E-value=43 Score=31.77 Aligned_cols=131 Identities=11% Similarity=0.123 Sum_probs=64.0
Q ss_pred eEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHc-CCceEEEEeecCCcccc-c
Q 047247 185 LHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLM-GVPFEFKVITGLNRLVE-L 262 (386)
Q Consensus 185 VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~l-gipFeF~~v~~~~~~e~-l 262 (386)
-+|+|+|.|.|. +...|+.++ |.-+||+|+.. ...++.+.+++.+.+..+ +-.++| +.. +..+ +
T Consensus 110 ~~VLdIG~G~G~----~~~~l~~~~---~~~~v~~vDid---~~~i~~Ar~~~~~~~~~~~~~rv~~--~~~--D~~~~l 175 (314)
T 2b2c_A 110 KRVLIIGGGDGG----ILREVLKHE---SVEKVTMCEID---EMVIDVAKKFLPGMSCGFSHPKLDL--FCG--DGFEFL 175 (314)
T ss_dssp CEEEEESCTTSH----HHHHHTTCT---TCCEEEEECSC---HHHHHHHHHHCTTTSGGGGCTTEEE--ECS--CHHHHH
T ss_pred CEEEEEcCCcCH----HHHHHHHcC---CCCEEEEEECC---HHHHHHHHHHHHHhccccCCCCEEE--EEC--hHHHHH
Confidence 479999999884 555666553 45799999852 234444444443222111 112333 321 2221 1
Q ss_pred cccccccCCCceEEEeecccccccccch-H--HHHHHHH-HhcCCcEEEEeeecCCCCCCccchHHHHHHHHHHHHHHHH
Q 047247 263 TKGTLGVKEDEAVAVNCIGALRRVAVEE-R--GAVIQMF-QSLKPKVVTIVEEEADLTSSRYDFVKCFEECLRFYTLYFE 338 (386)
Q Consensus 263 ~~~~L~~~~~EaLaVN~~~~Lh~l~~~~-r--~~vL~~i-r~L~P~vvvlvE~ea~~n~~~~~F~~RF~eaL~~YsalFD 338 (386)
.. .-..=+.|++|... ++.... . ..+++.+ +.|+|.-+++++.+.-.. -.+.+.....+...+|.
T Consensus 176 ~~---~~~~fD~Ii~d~~~---~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~-----~~~~~~~~~~~l~~vF~ 244 (314)
T 2b2c_A 176 KN---HKNEFDVIITDSSD---PVGPAESLFGQSYYELLRDALKEDGILSSQGESVWL-----HLPLIAHLVAFNRKIFP 244 (314)
T ss_dssp HH---CTTCEEEEEECCC----------------HHHHHHHHEEEEEEEEEECCCTTT-----CHHHHHHHHHHHHHHCS
T ss_pred Hh---cCCCceEEEEcCCC---CCCcchhhhHHHHHHHHHhhcCCCeEEEEECCCccc-----CHHHHHHHHHHHHHHCC
Confidence 11 00112567776642 111111 1 4566665 568999888886422111 12445555566666665
Q ss_pred Hh
Q 047247 339 ML 340 (386)
Q Consensus 339 sL 340 (386)
..
T Consensus 245 ~v 246 (314)
T 2b2c_A 245 AV 246 (314)
T ss_dssp EE
T ss_pred cc
Confidence 43
No 178
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=43.87 E-value=1.5e+02 Score=26.90 Aligned_cols=106 Identities=8% Similarity=0.011 Sum_probs=52.7
Q ss_pred HHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc--eEE
Q 047247 173 GAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP--FEF 250 (386)
Q Consensus 173 qaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip--FeF 250 (386)
..+.+.+... -.|+|+|.|.|.-=. .+|.+ |+. ++|||+. +...++.+. +-++..|+. .+|
T Consensus 117 ~~l~~~~~~~--~~VLDlgcG~G~~~~----~la~~--~~~--~V~~vD~---s~~~~~~a~----~n~~~n~~~~~v~~ 179 (278)
T 2frn_A 117 VRMAKVAKPD--ELVVDMFAGIGHLSL----PIAVY--GKA--KVIAIEK---DPYTFKFLV----ENIHLNKVEDRMSA 179 (278)
T ss_dssp HHHHHHCCTT--CEEEETTCTTTTTHH----HHHHH--TCC--EEEEECC---CHHHHHHHH----HHHHHTTCTTTEEE
T ss_pred HHHHHhCCCC--CEEEEecccCCHHHH----HHHHh--CCC--EEEEEEC---CHHHHHHHH----HHHHHcCCCceEEE
Confidence 3344444422 368999999985322 22332 333 8999995 223443333 335555665 444
Q ss_pred EEeecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHHHhcCCcEEEEee
Q 047247 251 KVITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMFQSLKPKVVTIVE 310 (386)
Q Consensus 251 ~~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~ir~L~P~vvvlvE 310 (386)
..- +..++.. -..=+.|++|... ...+.+-...+.|+|.-++++.
T Consensus 180 ~~~----D~~~~~~----~~~fD~Vi~~~p~-------~~~~~l~~~~~~LkpgG~l~~~ 224 (278)
T 2frn_A 180 YNM----DNRDFPG----ENIADRILMGYVV-------RTHEFIPKALSIAKDGAIIHYH 224 (278)
T ss_dssp ECS----CTTTCCC----CSCEEEEEECCCS-------SGGGGHHHHHHHEEEEEEEEEE
T ss_pred EEC----CHHHhcc----cCCccEEEECCch-------hHHHHHHHHHHHCCCCeEEEEE
Confidence 322 3433332 0111455554331 2223333456778998655553
No 179
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=43.77 E-value=65 Score=26.41 Aligned_cols=104 Identities=14% Similarity=0.096 Sum_probs=53.0
Q ss_pred HHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCC--ceEEEE
Q 047247 175 ILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGV--PFEFKV 252 (386)
Q Consensus 175 ILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgi--pFeF~~ 252 (386)
+++.+.-.+.-+|+|+|.|.|. +...|+.+. .++|||+. +...++.+.++ ++..|+ .++|..
T Consensus 25 ~~~~~~~~~~~~vldiG~G~G~----~~~~l~~~~-----~~v~~~D~---~~~~~~~a~~~----~~~~~~~~~~~~~~ 88 (192)
T 1l3i_A 25 IMCLAEPGKNDVAVDVGCGTGG----VTLELAGRV-----RRVYAIDR---NPEAISTTEMN----LQRHGLGDNVTLME 88 (192)
T ss_dssp HHHHHCCCTTCEEEEESCTTSH----HHHHHHTTS-----SEEEEEES---CHHHHHHHHHH----HHHTTCCTTEEEEE
T ss_pred HHHhcCCCCCCEEEEECCCCCH----HHHHHHHhc-----CEEEEEEC---CHHHHHHHHHH----HHHcCCCcceEEEe
Confidence 3343443444589999999873 344555543 58999985 22344443333 344565 344443
Q ss_pred eecCCcccc-ccccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEe
Q 047247 253 ITGLNRLVE-LTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIV 309 (386)
Q Consensus 253 v~~~~~~e~-l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlv 309 (386)
. ++.+ +.. + ..=+.|+.+. .+++ ...+|+.+ +.|+|.-.+++
T Consensus 89 ~----d~~~~~~~--~--~~~D~v~~~~--~~~~-----~~~~l~~~~~~l~~gG~l~~ 132 (192)
T 1l3i_A 89 G----DAPEALCK--I--PDIDIAVVGG--SGGE-----LQEILRIIKDKLKPGGRIIV 132 (192)
T ss_dssp S----CHHHHHTT--S--CCEEEEEESC--CTTC-----HHHHHHHHHHTEEEEEEEEE
T ss_pred c----CHHHhccc--C--CCCCEEEECC--chHH-----HHHHHHHHHHhcCCCcEEEE
Confidence 2 2332 111 1 1113444332 2333 35566665 55899865555
No 180
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=43.46 E-value=20 Score=31.10 Aligned_cols=103 Identities=7% Similarity=-0.005 Sum_probs=53.2
Q ss_pred EEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc--eEEEEeecCCcccccc
Q 047247 186 HIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP--FEFKVITGLNRLVELT 263 (386)
Q Consensus 186 HIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip--FeF~~v~~~~~~e~l~ 263 (386)
+|+|+|.|.|.- ...|+.+- |+..+||+|+.. ...++.+. +.++..|+. .+|..- ++.+.-
T Consensus 67 ~vLdiG~G~G~~----~~~la~~~--~~~~~v~~vD~~---~~~~~~a~----~~~~~~~~~~~v~~~~~----d~~~~~ 129 (225)
T 3tr6_A 67 KVIDIGTFTGYS----AIAMGLAL--PKDGTLITCDVD---EKSTALAK----EYWEKAGLSDKIGLRLS----PAKDTL 129 (225)
T ss_dssp EEEEECCTTSHH----HHHHHTTC--CTTCEEEEEESC---HHHHHHHH----HHHHHTTCTTTEEEEES----CHHHHH
T ss_pred EEEEeCCcchHH----HHHHHHhC--CCCCEEEEEeCC---HHHHHHHH----HHHHHCCCCCceEEEeC----CHHHHH
Confidence 799999999853 33444442 235799999952 23444333 334456665 555442 222211
Q ss_pred cccc-cc--CCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEeeec
Q 047247 264 KGTL-GV--KEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIVEEE 312 (386)
Q Consensus 264 ~~~L-~~--~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlvE~e 312 (386)
+... .. ..=+.|+++.. ......+|+.+ +.|+|.-+++++.-
T Consensus 130 ~~~~~~~~~~~fD~v~~~~~-------~~~~~~~l~~~~~~L~pgG~lv~~~~ 175 (225)
T 3tr6_A 130 AELIHAGQAWQYDLIYIDAD-------KANTDLYYEESLKLLREGGLIAVDNV 175 (225)
T ss_dssp HHHHTTTCTTCEEEEEECSC-------GGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred HHhhhccCCCCccEEEECCC-------HHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 1100 00 11134444332 12234455554 77899988888643
No 181
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=43.41 E-value=1.4e+02 Score=27.95 Aligned_cols=87 Identities=14% Similarity=0.079 Sum_probs=47.6
Q ss_pred HHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEE
Q 047247 173 GAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKV 252 (386)
Q Consensus 173 qaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~ 252 (386)
..|++++.-...-+|+|+|.|.|..-. .|+.+. -++|||+.... .++.+.+++. ..+ .+ +.
T Consensus 40 ~~Iv~~l~~~~~~~VLEIG~G~G~lT~----~La~~~-----~~V~aVEid~~---li~~a~~~~~----~~~-~v--~v 100 (295)
T 3gru_A 40 NKAVESANLTKDDVVLEIGLGKGILTE----ELAKNA-----KKVYVIEIDKS---LEPYANKLKE----LYN-NI--EI 100 (295)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHH----HHHHHS-----SEEEEEESCGG---GHHHHHHHHH----HCS-SE--EE
T ss_pred HHHHHhcCCCCcCEEEEECCCchHHHH----HHHhcC-----CEEEEEECCHH---HHHHHHHHhc----cCC-Ce--EE
Confidence 446666665555689999999986444 444441 48999986332 3333333333 111 23 33
Q ss_pred eecCCccccccccccccCCCceEEEeecccc
Q 047247 253 ITGLNRLVELTKGTLGVKEDEAVAVNCIGAL 283 (386)
Q Consensus 253 v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~L 283 (386)
+.. ++.++..... +-++|+.|..+..
T Consensus 101 i~g--D~l~~~~~~~---~fD~Iv~NlPy~i 126 (295)
T 3gru_A 101 IWG--DALKVDLNKL---DFNKVVANLPYQI 126 (295)
T ss_dssp EES--CTTTSCGGGS---CCSEEEEECCGGG
T ss_pred EEC--chhhCCcccC---CccEEEEeCcccc
Confidence 432 3444443321 2357888877643
No 182
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=42.78 E-value=32 Score=29.76 Aligned_cols=104 Identities=8% Similarity=0.007 Sum_probs=53.9
Q ss_pred eEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc--eEEEEeecCCccccc
Q 047247 185 LHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP--FEFKVITGLNRLVEL 262 (386)
Q Consensus 185 VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip--FeF~~v~~~~~~e~l 262 (386)
-+|+|+|.|.|.- ...|+.+- |+.-+||+|+.. ...++.+. +.++..|++ ++|..- +..+.
T Consensus 60 ~~vLdiG~G~G~~----~~~la~~~--~~~~~v~~vD~~---~~~~~~a~----~~~~~~~~~~~v~~~~~----d~~~~ 122 (223)
T 3duw_A 60 RNILEIGTLGGYS----TIWLARGL--SSGGRVVTLEAS---EKHADIAR----SNIERANLNDRVEVRTG----LALDS 122 (223)
T ss_dssp SEEEEECCTTSHH----HHHHHTTC--CSSCEEEEEESC---HHHHHHHH----HHHHHTTCTTTEEEEES----CHHHH
T ss_pred CEEEEecCCccHH----HHHHHHhC--CCCCEEEEEECC---HHHHHHHH----HHHHHcCCCCcEEEEEc----CHHHH
Confidence 4789999998743 23344442 234699999952 23343333 334456764 555443 22221
Q ss_pred cccccc---cCCCceEEEeecccccccccchHHHHHHH-HHhcCCcEEEEeeecC
Q 047247 263 TKGTLG---VKEDEAVAVNCIGALRRVAVEERGAVIQM-FQSLKPKVVTIVEEEA 313 (386)
Q Consensus 263 ~~~~L~---~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~-ir~L~P~vvvlvE~ea 313 (386)
-+. +. ...=+.|+++... .....+|+. .+.|+|.-+++++.-.
T Consensus 123 ~~~-~~~~~~~~fD~v~~d~~~-------~~~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 123 LQQ-IENEKYEPFDFIFIDADK-------QNNPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp HHH-HHHTTCCCCSEEEECSCG-------GGHHHHHHHHHHTCCTTCEEEEESCS
T ss_pred HHH-HHhcCCCCcCEEEEcCCc-------HHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 111 00 0112455555431 223345555 4778999988886433
No 183
>2ksn_A Ubiquitin domain-containing protein 2; UBTD2, DC-UBP, signaling protein; NMR {Homo sapiens}
Probab=42.11 E-value=59 Score=27.63 Aligned_cols=38 Identities=21% Similarity=0.175 Sum_probs=31.1
Q ss_pred hHHHHHHHHHHHHhcCCHHHHHHHHHHHhhccCCCCCch
Q 047247 73 WASKLLKECARAISDKDSSKIHHLLWMLNELASPYGDCD 111 (386)
Q Consensus 73 ~l~~LL~~cA~Av~~~~~~~A~~lL~~L~~laSp~Gd~~ 111 (386)
-+-+-|-+|++++++||.+.|+.||..-. ..-|.||-.
T Consensus 57 EIW~ALraA~~~~e~~Dl~tAQ~IldaAg-Itvp~gdL~ 94 (137)
T 2ksn_A 57 EIWDALKAAAHAFESNDHELAQAIIDGAN-ITLPHGALT 94 (137)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHS-CBCSSCCSS
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHcC-CcccCCcHH
Confidence 34489999999999999999999997654 677788743
No 184
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=41.22 E-value=50 Score=27.09 Aligned_cols=48 Identities=21% Similarity=0.390 Sum_probs=34.4
Q ss_pred EeeccCC-CCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCce
Q 047247 187 IIDMSNT-LCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPF 248 (386)
Q Consensus 187 IIDf~i~-~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipF 248 (386)
|||++-. ...+|..|++.|..+. |++-||....+ ..+.+.|+..|+|+
T Consensus 51 VlDl~~l~~~~dl~~L~~~l~~~g-----l~~vGV~g~~~---------~~~~~~a~~~GLp~ 99 (120)
T 3ghf_A 51 VINVSGLESPVNWPELHKIVTSTG-----LRIIGVSGCKD---------ASLKVEIDRMGLPL 99 (120)
T ss_dssp EEEEEECCSSCCHHHHHHHHHTTT-----CEEEEEESCCC---------HHHHHHHHHHTCCE
T ss_pred EEEccccCChHHHHHHHHHHHHcC-----CEEEEEeCCCc---------HHHHHHHHHCCCCc
Confidence 6787643 3579999999998873 89999974221 12346678889985
No 185
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=41.06 E-value=1.2e+02 Score=28.42 Aligned_cols=108 Identities=7% Similarity=-0.009 Sum_probs=57.1
Q ss_pred eEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHH-c-CCceEEEEeecCCccccc
Q 047247 185 LHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARL-M-GVPFEFKVITGLNRLVEL 262 (386)
Q Consensus 185 VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~-l-gipFeF~~v~~~~~~e~l 262 (386)
-+|+|+|.|.|. +...|+.++ |..+||+|+.. ...++.+.+++.+.... + +-.++|..- +..+.
T Consensus 79 ~~VLdiG~G~G~----~~~~l~~~~---~~~~v~~vDid---~~~i~~ar~~~~~~~~~~~~~~~v~~~~~----D~~~~ 144 (314)
T 1uir_A 79 KRVLIVGGGEGA----TLREVLKHP---TVEKAVMVDID---GELVEVAKRHMPEWHQGAFDDPRAVLVID----DARAY 144 (314)
T ss_dssp CEEEEEECTTSH----HHHHHTTST---TCCEEEEEESC---HHHHHHHHHHCHHHHTTGGGCTTEEEEES----CHHHH
T ss_pred CeEEEEcCCcCH----HHHHHHhcC---CCCEEEEEECC---HHHHHHHHHHhHhhccccccCCceEEEEc----hHHHH
Confidence 489999999984 556666653 45799999852 33455555555443321 2 123444322 22221
Q ss_pred cccccccCCCceEEEeecccccccccch-----HHHHHHHH-HhcCCcEEEEee
Q 047247 263 TKGTLGVKEDEAVAVNCIGALRRVAVEE-----RGAVIQMF-QSLKPKVVTIVE 310 (386)
Q Consensus 263 ~~~~L~~~~~EaLaVN~~~~Lh~l~~~~-----r~~vL~~i-r~L~P~vvvlvE 310 (386)
-.. .-..=+.|++++.. |.-...+ ...+++.+ +.|+|.-++++.
T Consensus 145 l~~--~~~~fD~Ii~d~~~--~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 194 (314)
T 1uir_A 145 LER--TEERYDVVIIDLTD--PVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ 194 (314)
T ss_dssp HHH--CCCCEEEEEEECCC--CBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred HHh--cCCCccEEEECCCC--cccccCcchhccHHHHHHHHHHhcCCCcEEEEE
Confidence 100 00112577777543 2200011 35677766 558999777774
No 186
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=40.57 E-value=33 Score=30.33 Aligned_cols=103 Identities=8% Similarity=0.076 Sum_probs=54.7
Q ss_pred eEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc--eEEEEeecCCccccc
Q 047247 185 LHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP--FEFKVITGLNRLVEL 262 (386)
Q Consensus 185 VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip--FeF~~v~~~~~~e~l 262 (386)
-.|+|+|.|.|.-- ..|+... |..+||+|+.. ...++.+. +.++..|+. .+|..- +..+.
T Consensus 73 ~~vLDiG~G~G~~~----~~la~~~---~~~~v~~vD~~---~~~~~~a~----~~~~~~~~~~~v~~~~~----d~~~~ 134 (232)
T 3ntv_A 73 KNILEIGTAIGYSS----MQFASIS---DDIHVTTIERN---ETMIQYAK----QNLATYHFENQVRIIEG----NALEQ 134 (232)
T ss_dssp CEEEEECCSSSHHH----HHHHTTC---TTCEEEEEECC---HHHHHHHH----HHHHHTTCTTTEEEEES----CGGGC
T ss_pred CEEEEEeCchhHHH----HHHHHhC---CCCEEEEEECC---HHHHHHHH----HHHHHcCCCCcEEEEEC----CHHHH
Confidence 47999999998532 3344421 35799999952 23444333 334556763 555443 23322
Q ss_pred cccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEeeecC
Q 047247 263 TKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIVEEEA 313 (386)
Q Consensus 263 ~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlvE~ea 313 (386)
-++.+ -..=+.|+++.. ......+|+.+ +.|+|.-+++++.-.
T Consensus 135 ~~~~~-~~~fD~V~~~~~-------~~~~~~~l~~~~~~LkpgG~lv~d~~~ 178 (232)
T 3ntv_A 135 FENVN-DKVYDMIFIDAA-------KAQSKKFFEIYTPLLKHQGLVITDNVL 178 (232)
T ss_dssp HHHHT-TSCEEEEEEETT-------SSSHHHHHHHHGGGEEEEEEEEEECTT
T ss_pred HHhhc-cCCccEEEEcCc-------HHHHHHHHHHHHHhcCCCeEEEEeeCC
Confidence 21001 011245555432 12234566655 678999998885433
No 187
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=40.54 E-value=1.6e+02 Score=28.20 Aligned_cols=106 Identities=17% Similarity=0.045 Sum_probs=56.8
Q ss_pred ceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCC--ceEEEEeecCCccc
Q 047247 183 TKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGV--PFEFKVITGLNRLV 260 (386)
Q Consensus 183 ~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgi--pFeF~~v~~~~~~e 260 (386)
..-.|+|+|.|.|. +.-.++.+. +.-+|+|++. +...++.+.++ ++..|+ ..+|..- ++.
T Consensus 217 ~~~~vLD~gCGsG~----~~i~~a~~~---~~~~v~g~Di---s~~~l~~A~~n----~~~~gl~~~i~~~~~----D~~ 278 (373)
T 3tm4_A 217 DGGSVLDPMCGSGT----ILIELALRR---YSGEIIGIEK---YRKHLIGAEMN----ALAAGVLDKIKFIQG----DAT 278 (373)
T ss_dssp CSCCEEETTCTTCH----HHHHHHHTT---CCSCEEEEES---CHHHHHHHHHH----HHHTTCGGGCEEEEC----CGG
T ss_pred CCCEEEEccCcCcH----HHHHHHHhC---CCCeEEEEeC---CHHHHHHHHHH----HHHcCCCCceEEEEC----Chh
Confidence 44578999999984 444455542 1238999995 23345444443 445576 4555443 344
Q ss_pred cccccccccCCCceEEEeecccccccc----cchHHHHHHHHHh-cCCcEEEEe
Q 047247 261 ELTKGTLGVKEDEAVAVNCIGALRRVA----VEERGAVIQMFQS-LKPKVVTIV 309 (386)
Q Consensus 261 ~l~~~~L~~~~~EaLaVN~~~~Lh~l~----~~~r~~vL~~ir~-L~P~vvvlv 309 (386)
++... ...-+.|+.|-.+...--. ..--..+++.++. |++.+++++
T Consensus 279 ~~~~~---~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l~g~~~~i~ 329 (373)
T 3tm4_A 279 QLSQY---VDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVLEKRGVFIT 329 (373)
T ss_dssp GGGGT---CSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred hCCcc---cCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 44321 1223578888776542111 1112457777765 666666664
No 188
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=40.19 E-value=1.1e+02 Score=27.86 Aligned_cols=95 Identities=12% Similarity=0.009 Sum_probs=51.7
Q ss_pred EEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc-eEEEEeecCCccccccc
Q 047247 186 HIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP-FEFKVITGLNRLVELTK 264 (386)
Q Consensus 186 HIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip-FeF~~v~~~~~~e~l~~ 264 (386)
.|+|+|.|.|.--..+ |.+. +.-+++||+. +...++.+. +-++..|++ .+| +.. +.+++ +
T Consensus 122 ~VLDlgcG~G~~s~~l----a~~~---~~~~V~~vD~---s~~av~~a~----~n~~~n~l~~~~~--~~~--d~~~~-~ 182 (272)
T 3a27_A 122 VVVDMFAGIGYFTIPL----AKYS---KPKLVYAIEK---NPTAYHYLC----ENIKLNKLNNVIP--ILA--DNRDV-E 182 (272)
T ss_dssp EEEETTCTTTTTHHHH----HHHT---CCSEEEEEEC---CHHHHHHHH----HHHHHTTCSSEEE--EES--CGGGC-C
T ss_pred EEEEecCcCCHHHHHH----HHhC---CCCEEEEEeC---CHHHHHHHH----HHHHHcCCCCEEE--EEC--ChHHc-C
Confidence 6899999998754433 3331 1358999985 223443333 334555664 443 322 35444 2
Q ss_pred cccccCCCceEEEeecccccccccchHHHHHHHHHhcCCcEEEEe
Q 047247 265 GTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMFQSLKPKVVTIV 309 (386)
Q Consensus 265 ~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~ir~L~P~vvvlv 309 (386)
. ...=+.|++|... ...+.+...++.|+|.-++++
T Consensus 183 ~---~~~~D~Vi~d~p~-------~~~~~l~~~~~~LkpgG~l~~ 217 (272)
T 3a27_A 183 L---KDVADRVIMGYVH-------KTHKFLDKTFEFLKDRGVIHY 217 (272)
T ss_dssp C---TTCEEEEEECCCS-------SGGGGHHHHHHHEEEEEEEEE
T ss_pred c---cCCceEEEECCcc-------cHHHHHHHHHHHcCCCCEEEE
Confidence 2 1112566666543 233344455788999866655
No 189
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=39.58 E-value=1e+02 Score=26.49 Aligned_cols=103 Identities=12% Similarity=0.062 Sum_probs=51.5
Q ss_pred HHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEe
Q 047247 174 AILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVI 253 (386)
Q Consensus 174 aILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v 253 (386)
.|++.+.-...-+|+|+|.|.|.--. .|+.+. -++|||+.. ...++.+.+++ +..| ..+|...
T Consensus 61 ~~~~~~~~~~~~~vLdiG~G~G~~~~----~l~~~~-----~~v~~vD~~---~~~~~~a~~~~----~~~~-~v~~~~~ 123 (231)
T 1vbf_A 61 FMLDELDLHKGQKVLEIGTGIGYYTA----LIAEIV-----DKVVSVEIN---EKMYNYASKLL----SYYN-NIKLILG 123 (231)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHH----HHHHHS-----SEEEEEESC---HHHHHHHHHHH----TTCS-SEEEEES
T ss_pred HHHHhcCCCCCCEEEEEcCCCCHHHH----HHHHHc-----CEEEEEeCC---HHHHHHHHHHH----hhcC-CeEEEEC
Confidence 34455544445589999999876333 333331 489999852 23444333332 3334 4444332
Q ss_pred ecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHHHhcCCcEEEEe
Q 047247 254 TGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMFQSLKPKVVTIV 309 (386)
Q Consensus 254 ~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~ir~L~P~vvvlv 309 (386)
++.+.-+. -..=+.|++ ...+|++.. ...+.|+|.-.+++
T Consensus 124 ----d~~~~~~~---~~~fD~v~~--~~~~~~~~~-------~~~~~L~pgG~l~~ 163 (231)
T 1vbf_A 124 ----DGTLGYEE---EKPYDRVVV--WATAPTLLC-------KPYEQLKEGGIMIL 163 (231)
T ss_dssp ----CGGGCCGG---GCCEEEEEE--SSBBSSCCH-------HHHHTEEEEEEEEE
T ss_pred ----Cccccccc---CCCccEEEE--CCcHHHHHH-------HHHHHcCCCcEEEE
Confidence 23321110 011134443 345677652 34567888855544
No 190
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=39.24 E-value=42 Score=29.79 Aligned_cols=43 Identities=16% Similarity=0.119 Sum_probs=28.0
Q ss_pred HHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEecc
Q 047247 175 ILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVT 222 (386)
Q Consensus 175 ILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~ 222 (386)
+++.+.+.+...|+|+|.|.| .+.-.|+.+- ..|..+|+||+.
T Consensus 43 ~l~~~~~~~~~~vLD~gcGsG----~~~~~la~~~-~~~~~~v~gvDi 85 (250)
T 1o9g_A 43 ALARLPGDGPVTLWDPCCGSG----YLLTVLGLLH-RRSLRQVIASDV 85 (250)
T ss_dssp HHHTSSCCSCEEEEETTCTTS----HHHHHHHHHT-GGGEEEEEEEES
T ss_pred HHHhcccCCCCeEEECCCCCC----HHHHHHHHHh-ccCCCeEEEEEC
Confidence 344555556789999999999 3444444431 013579999985
No 191
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=38.60 E-value=1e+02 Score=29.20 Aligned_cols=121 Identities=11% Similarity=0.024 Sum_probs=74.5
Q ss_pred HHHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcC--CceE
Q 047247 172 NGAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMG--VPFE 249 (386)
Q Consensus 172 NqaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lg--ipFe 249 (386)
...|.++++...+ -|||+|.|.-.. -+.|. .|+.+++--|+.|. +-+.+++|.. ..| -+=.
T Consensus 92 d~~v~~~~~~g~~-QvV~LGaGlDTr----a~Rl~----~~~~~~v~evD~P~-----vi~~k~~lL~---~~~~~~~~~ 154 (310)
T 2uyo_A 92 DTYFNNAVIDGIR-QFVILASGLDSR----AYRLD----WPTGTTVYEIDQPK-----VLAYKSTTLA---EHGVTPTAD 154 (310)
T ss_dssp HHHHHHHHHTTCC-EEEEETCTTCCH----HHHSC----CCTTCEEEEEECHH-----HHHHHHHHHH---HTTCCCSSE
T ss_pred HHHHHHHHHhCCC-eEEEeCCCCCch----hhhcc----CCCCcEEEEcCCHH-----HHHHHHHHHH---hcCCCCCCC
Confidence 4444444432223 599999998443 34442 24458888888542 3344444442 122 2234
Q ss_pred EEEeecCCccccccc-ccc---ccCCCceEEEeecccccccccchHHHHHHHHHhc-CCcEEEEeeec
Q 047247 250 FKVITGLNRLVELTK-GTL---GVKEDEAVAVNCIGALRRVAVEERGAVIQMFQSL-KPKVVTIVEEE 312 (386)
Q Consensus 250 F~~v~~~~~~e~l~~-~~L---~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~ir~L-~P~vvvlvE~e 312 (386)
++.|.+ ++.+ +. +.| +++.+..+++-+..-||++.......+|+.|.++ .|.-.++.|+-
T Consensus 155 ~~~v~~--Dl~d-~~~~~l~~~g~d~~~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~ 219 (310)
T 2uyo_A 155 RREVPI--DLRQ-DWPPALRSAGFDPSARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETS 219 (310)
T ss_dssp EEEEEC--CTTS-CHHHHHHHTTCCTTSCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECC
T ss_pred eEEEec--chHh-hHHHHHHhccCCCCCCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEec
Confidence 555653 3544 21 112 3567789999999999999877788899999886 57877888774
No 192
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=37.14 E-value=23 Score=30.05 Aligned_cols=41 Identities=17% Similarity=0.208 Sum_probs=27.1
Q ss_pred HHhhcCC-CceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEecc
Q 047247 175 ILEALDG-ETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVT 222 (386)
Q Consensus 175 ILeA~~g-~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~ 222 (386)
+++.+.. .+.-.|+|+|.|.|. +...|+.+. |..++|||+.
T Consensus 21 ~~~~l~~~~~~~~vLDiG~G~G~----~~~~l~~~~---~~~~v~~vD~ 62 (215)
T 4dzr_A 21 AIRFLKRMPSGTRVIDVGTGSGC----IAVSIALAC---PGVSVTAVDL 62 (215)
T ss_dssp HHHHHTTCCTTEEEEEEESSBCH----HHHHHHHHC---TTEEEEEEEC
T ss_pred HHHHhhhcCCCCEEEEecCCHhH----HHHHHHHhC---CCCeEEEEEC
Confidence 3344443 566799999999985 333444432 4579999995
No 193
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=35.83 E-value=1.5e+02 Score=28.23 Aligned_cols=97 Identities=15% Similarity=0.023 Sum_probs=51.5
Q ss_pred eeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEeecCCcccc-c
Q 047247 184 KLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVITGLNRLVE-L 262 (386)
Q Consensus 184 ~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v~~~~~~e~-l 262 (386)
.-.|+|+| |.|. +. ..|+.+ + |..++|||+.. ...++.+.++ ++..|+. ..+.+.. ++.+ +
T Consensus 173 ~~~VLDlG-G~G~-~~---~~la~~--~-~~~~v~~vDi~---~~~l~~a~~~----~~~~g~~-~v~~~~~--D~~~~l 234 (373)
T 2qm3_A 173 NKDIFVLG-DDDL-TS---IALMLS--G-LPKRIAVLDID---ERLTKFIEKA----ANEIGYE-DIEIFTF--DLRKPL 234 (373)
T ss_dssp TCEEEEES-CTTC-HH---HHHHHH--T-CCSEEEEECSC---HHHHHHHHHH----HHHHTCC-CEEEECC--CTTSCC
T ss_pred CCEEEEEC-CCCH-HH---HHHHHh--C-CCCEEEEEECC---HHHHHHHHHH----HHHcCCC-CEEEEEC--hhhhhc
Confidence 34799999 8775 22 233333 2 34699999952 2345444443 4455764 3333432 3444 3
Q ss_pred cccccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcE
Q 047247 263 TKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKV 305 (386)
Q Consensus 263 ~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~v 305 (386)
... +. ..=+.|++|..+.... ...+|+.+ +.|+|.-
T Consensus 235 ~~~-~~-~~fD~Vi~~~p~~~~~-----~~~~l~~~~~~LkpgG 271 (373)
T 2qm3_A 235 PDY-AL-HKFDTFITDPPETLEA-----IRAFVGRGIATLKGPR 271 (373)
T ss_dssp CTT-TS-SCBSEEEECCCSSHHH-----HHHHHHHHHHTBCSTT
T ss_pred hhh-cc-CCccEEEECCCCchHH-----HHHHHHHHHHHcccCC
Confidence 211 10 1226888887754331 35566655 6789954
No 194
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=35.75 E-value=1.9e+02 Score=25.32 Aligned_cols=48 Identities=17% Similarity=0.146 Sum_probs=29.9
Q ss_pred ceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHH
Q 047247 183 TKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKF 240 (386)
Q Consensus 183 ~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~f 240 (386)
+.-.|+|+|.|.|. +...||.+. |..++|||+. +...++.+.+++...
T Consensus 49 ~~~~vLDiGcG~G~----~~~~la~~~---~~~~v~gvD~---s~~~l~~a~~~~~~~ 96 (246)
T 2vdv_E 49 KKVTIADIGCGFGG----LMIDLSPAF---PEDLILGMEI---RVQVTNYVEDRIIAL 96 (246)
T ss_dssp CCEEEEEETCTTSH----HHHHHHHHS---TTSEEEEEES---CHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCH----HHHHHHHhC---CCCCEEEEEc---CHHHHHHHHHHHHHH
Confidence 34689999999985 334444442 3579999995 233555555554433
No 195
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=35.64 E-value=2.1e+02 Score=24.61 Aligned_cols=74 Identities=11% Similarity=0.010 Sum_probs=41.4
Q ss_pred eeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCC--ceEEEEeecCCcccc
Q 047247 184 KLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGV--PFEFKVITGLNRLVE 261 (386)
Q Consensus 184 ~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgi--pFeF~~v~~~~~~e~ 261 (386)
.-+|+|+|.|.|. +...|+.+ | .++|||+.. ...++.+. +-++..|+ .++|..- ++.+
T Consensus 79 ~~~vLD~gcG~G~----~~~~la~~--~---~~v~~vD~s---~~~~~~a~----~~~~~~~~~~~~~~~~~----d~~~ 138 (241)
T 3gdh_A 79 CDVVVDAFCGVGG----NTIQFALT--G---MRVIAIDID---PVKIALAR----NNAEVYGIADKIEFICG----DFLL 138 (241)
T ss_dssp CSEEEETTCTTSH----HHHHHHHT--T---CEEEEEESC---HHHHHHHH----HHHHHTTCGGGEEEEES----CHHH
T ss_pred CCEEEECccccCH----HHHHHHHc--C---CEEEEEECC---HHHHHHHH----HHHHHcCCCcCeEEEEC----ChHH
Confidence 4579999999984 44445554 2 689999952 23444333 33455677 4555543 3444
Q ss_pred ccccccccCCCceEEEeecc
Q 047247 262 LTKGTLGVKEDEAVAVNCIG 281 (386)
Q Consensus 262 l~~~~L~~~~~EaLaVN~~~ 281 (386)
+.+. ..=+.|+.|.++
T Consensus 139 ~~~~----~~~D~v~~~~~~ 154 (241)
T 3gdh_A 139 LASF----LKADVVFLSPPW 154 (241)
T ss_dssp HGGG----CCCSEEEECCCC
T ss_pred hccc----CCCCEEEECCCc
Confidence 3321 122466666543
No 196
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=35.24 E-value=2e+02 Score=25.98 Aligned_cols=52 Identities=17% Similarity=0.145 Sum_probs=30.4
Q ss_pred ceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc
Q 047247 183 TKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP 247 (386)
Q Consensus 183 ~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip 247 (386)
..-+|+|+|.|.|.--..|.+.+ + ..-+|+|++. +...++. +.+-++..|++
T Consensus 83 ~g~~VLDlgaG~G~~t~~la~~~---~---~~~~v~avD~---~~~~l~~----~~~~~~~~g~~ 134 (274)
T 3ajd_A 83 EDDFILDMCAAPGGKTTHLAQLM---K---NKGTIVAVEI---SKTRTKA----LKSNINRMGVL 134 (274)
T ss_dssp TTCEEEETTCTTCHHHHHHHHHT---T---TCSEEEEEES---CHHHHHH----HHHHHHHTTCC
T ss_pred CcCEEEEeCCCccHHHHHHHHHc---C---CCCEEEEECC---CHHHHHH----HHHHHHHhCCC
Confidence 33479999999986433333322 1 1358999995 2334443 33445567775
No 197
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=35.16 E-value=1.5e+02 Score=24.15 Aligned_cols=107 Identities=14% Similarity=0.057 Sum_probs=54.8
Q ss_pred eEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc--eEEEEeecCCccccc
Q 047247 185 LHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP--FEFKVITGLNRLVEL 262 (386)
Q Consensus 185 VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip--FeF~~v~~~~~~e~l 262 (386)
-.|+|+|.|.|.- ...++.++ .-++|||+.. ...++.+.++ ++..|++ .+|..- ++.+.
T Consensus 46 ~~vLD~GcG~G~~----~~~~~~~~----~~~v~~vD~~---~~~~~~a~~~----~~~~~~~~~~~~~~~----d~~~~ 106 (187)
T 2fhp_A 46 GMALDLYSGSGGL----AIEAVSRG----MDKSICIEKN---FAALKVIKEN----IAITKEPEKFEVRKM----DANRA 106 (187)
T ss_dssp CEEEETTCTTCHH----HHHHHHTT----CSEEEEEESC---HHHHHHHHHH----HHHHTCGGGEEEEES----CHHHH
T ss_pred CCEEEeCCccCHH----HHHHHHcC----CCEEEEEECC---HHHHHHHHHH----HHHhCCCcceEEEEC----cHHHH
Confidence 4799999998853 22234442 3589999952 2344444333 3344653 555432 33332
Q ss_pred cccc-cccCCCceEEEeecccccccccchHHHHHHHH---HhcCCcEEEEeeecCCC
Q 047247 263 TKGT-LGVKEDEAVAVNCIGALRRVAVEERGAVIQMF---QSLKPKVVTIVEEEADL 315 (386)
Q Consensus 263 ~~~~-L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i---r~L~P~vvvlvE~ea~~ 315 (386)
.+.. ..-..=+.|+.|..+..+ ..+.+++.+ +-|+|.-+++++.....
T Consensus 107 ~~~~~~~~~~fD~i~~~~~~~~~-----~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 107 LEQFYEEKLQFDLVLLDPPYAKQ-----EIVSQLEKMLERQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp HHHHHHTTCCEEEEEECCCGGGC-----CHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred HHHHHhcCCCCCEEEECCCCCch-----hHHHHHHHHHHhcccCCCCEEEEEeCCcc
Confidence 2110 000111466666654311 233455554 55899988877654443
No 198
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=32.05 E-value=47 Score=29.89 Aligned_cols=41 Identities=12% Similarity=0.103 Sum_probs=28.4
Q ss_pred HHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEecc
Q 047247 173 GAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVT 222 (386)
Q Consensus 173 qaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~ 222 (386)
+.|++.+.-...-+|+|+|.|.|. +...|+.+. -++|||+.
T Consensus 20 ~~i~~~~~~~~~~~VLDiG~G~G~----lt~~l~~~~-----~~v~~vD~ 60 (244)
T 1qam_A 20 DKIMTNIRLNEHDNIFEIGSGKGH----FTLELVQRC-----NFVTAIEI 60 (244)
T ss_dssp HHHHTTCCCCTTCEEEEECCTTSH----HHHHHHHHS-----SEEEEECS
T ss_pred HHHHHhCCCCCCCEEEEEeCCchH----HHHHHHHcC-----CeEEEEEC
Confidence 456666654455689999999986 444555552 48999995
No 199
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=31.96 E-value=81 Score=27.18 Aligned_cols=103 Identities=14% Similarity=0.019 Sum_probs=51.2
Q ss_pred eEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc--eEEEEeecCCccccc
Q 047247 185 LHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP--FEFKVITGLNRLVEL 262 (386)
Q Consensus 185 VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip--FeF~~v~~~~~~e~l 262 (386)
-+|+|+|.|.|. +...|+..- |+.-+||+|+... ..++.+.+ .++..|+. ++|..- +..+.
T Consensus 71 ~~vLdiG~G~G~----~~~~la~~~--~~~~~v~~vD~~~---~~~~~a~~----~~~~~g~~~~i~~~~~----d~~~~ 133 (229)
T 2avd_A 71 KKALDLGTFTGY----SALALALAL--PADGRVVTCEVDA---QPPELGRP----LWRQAEAEHKIDLRLK----PALET 133 (229)
T ss_dssp CEEEEECCTTSH----HHHHHHTTS--CTTCEEEEEESCS---HHHHHHHH----HHHHTTCTTTEEEEES----CHHHH
T ss_pred CEEEEEcCCccH----HHHHHHHhC--CCCCEEEEEECCH---HHHHHHHH----HHHHCCCCCeEEEEEc----CHHHH
Confidence 379999999874 233444432 2346999998532 23433333 33445653 444432 22211
Q ss_pred ccccccc----CCCceEEEeecccccccccchHHHHHHH-HHhcCCcEEEEeeec
Q 047247 263 TKGTLGV----KEDEAVAVNCIGALRRVAVEERGAVIQM-FQSLKPKVVTIVEEE 312 (386)
Q Consensus 263 ~~~~L~~----~~~EaLaVN~~~~Lh~l~~~~r~~vL~~-ir~L~P~vvvlvE~e 312 (386)
-+. +.- ..=+.|+++.. ......+++. .+.|+|.-+++++.-
T Consensus 134 ~~~-~~~~~~~~~~D~v~~d~~-------~~~~~~~l~~~~~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 134 LDE-LLAAGEAGTFDVAVVDAD-------KENCSAYYERCLQLLRPGGILAVLRV 180 (229)
T ss_dssp HHH-HHHTTCTTCEEEEEECSC-------STTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred HHH-HHhcCCCCCccEEEECCC-------HHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 110 100 11134444433 1222344444 477899988888653
No 200
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=31.95 E-value=84 Score=27.05 Aligned_cols=46 Identities=4% Similarity=-0.008 Sum_probs=28.1
Q ss_pred ceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHH
Q 047247 183 TKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRM 237 (386)
Q Consensus 183 ~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL 237 (386)
..-+|+|+|.|.|..-..|.+.+ | |..++|+|+.. ...++.+.+++
T Consensus 77 ~~~~vLDiG~G~G~~~~~la~~~-----~-~~~~v~~vD~s---~~~~~~a~~~~ 122 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFARMV-----G-CTGKVIGIDHI---KELVDDSVNNV 122 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH-----C-TTCEEEEEESC---HHHHHHHHHHH
T ss_pred CCCEEEEEcCCcCHHHHHHHHHh-----C-CCcEEEEEeCC---HHHHHHHHHHH
Confidence 34589999999886544444433 1 34589999852 33454444444
No 201
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=31.56 E-value=2.9e+02 Score=24.91 Aligned_cols=30 Identities=0% Similarity=-0.156 Sum_probs=20.3
Q ss_pred eEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEecc
Q 047247 185 LHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVT 222 (386)
Q Consensus 185 VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~ 222 (386)
-.|+|+|.|.|. .+ ..|+.+ |. -++|||+.
T Consensus 81 ~~vLDlG~G~G~--~~--~~~a~~--~~--~~v~~~D~ 110 (281)
T 3bzb_A 81 KTVCELGAGAGL--VS--IVAFLA--GA--DQVVATDY 110 (281)
T ss_dssp CEEEETTCTTSH--HH--HHHHHT--TC--SEEEEEEC
T ss_pred CeEEEecccccH--HH--HHHHHc--CC--CEEEEEeC
Confidence 379999999884 22 245554 21 38999995
No 202
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=30.76 E-value=87 Score=26.98 Aligned_cols=50 Identities=8% Similarity=-0.047 Sum_probs=28.3
Q ss_pred eeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHH
Q 047247 184 KLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRME 238 (386)
Q Consensus 184 ~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~ 238 (386)
.-+|+|+|.|.|..-..|.+.+..+ ..|..++|+|+. +...++.+.+++.
T Consensus 81 ~~~VLdiG~G~G~~~~~la~~~~~~--~~~~~~v~~vD~---~~~~~~~a~~~~~ 130 (227)
T 2pbf_A 81 GSRAIDVGSGSGYLTVCMAIKMNVL--ENKNSYVIGLER---VKDLVNFSLENIK 130 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHTTTT--TCTTCEEEEEES---CHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHhccc--CCCCCEEEEEeC---CHHHHHHHHHHHH
Confidence 4589999999985433333322111 124569999985 2334544444443
No 203
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=30.62 E-value=2.4e+02 Score=24.24 Aligned_cols=29 Identities=0% Similarity=-0.060 Sum_probs=22.6
Q ss_pred eEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEecc
Q 047247 185 LHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVT 222 (386)
Q Consensus 185 VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~ 222 (386)
-+|+|+|.|.|. +...|+.+ + .++|||+.
T Consensus 50 ~~vLDiGcG~G~----~~~~l~~~--~---~~v~~vD~ 78 (226)
T 3m33_A 50 TRVLEAGCGHGP----DAARFGPQ--A---ARWAAYDF 78 (226)
T ss_dssp CEEEEESCTTSH----HHHHHGGG--S---SEEEEEES
T ss_pred CeEEEeCCCCCH----HHHHHHHc--C---CEEEEEEC
Confidence 479999999986 56666666 2 48999995
No 204
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=30.32 E-value=1.2e+02 Score=28.65 Aligned_cols=112 Identities=10% Similarity=0.072 Sum_probs=56.2
Q ss_pred eEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCce-EEEEeecCCcccccc
Q 047247 185 LHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPF-EFKVITGLNRLVELT 263 (386)
Q Consensus 185 VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipF-eF~~v~~~~~~e~l~ 263 (386)
-.|+|+|.+.|. +.-.++.+ |. ++|+|+. +...++.+.++ ++..|+.- ....+.. ++.++.
T Consensus 155 ~~VLDlgcGtG~----~sl~la~~--ga---~V~~VD~---s~~al~~a~~n----~~~~gl~~~~v~~i~~--D~~~~l 216 (332)
T 2igt_A 155 LKVLNLFGYTGV----ASLVAAAA--GA---EVTHVDA---SKKAIGWAKEN----QVLAGLEQAPIRWICE--DAMKFI 216 (332)
T ss_dssp CEEEEETCTTCH----HHHHHHHT--TC---EEEEECS---CHHHHHHHHHH----HHHHTCTTSCEEEECS--CHHHHH
T ss_pred CcEEEcccccCH----HHHHHHHc--CC---EEEEEEC---CHHHHHHHHHH----HHHcCCCccceEEEEC--cHHHHH
Confidence 479999999984 33334443 32 8999995 23345444433 34456541 1233321 333322
Q ss_pred cccc-ccCCCceEEEeec-cccc------ccccchHHHHHHH-HHhcCCcEEEEeeecCCC
Q 047247 264 KGTL-GVKEDEAVAVNCI-GALR------RVAVEERGAVIQM-FQSLKPKVVTIVEEEADL 315 (386)
Q Consensus 264 ~~~L-~~~~~EaLaVN~~-~~Lh------~l~~~~r~~vL~~-ir~L~P~vvvlvE~ea~~ 315 (386)
.... .-..=+.|+.|-. +... +.. .....+|+. .+-|+|.-+++++.....
T Consensus 217 ~~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~-~~~~~ll~~~~~~LkpgG~lli~~~~~~ 276 (332)
T 2igt_A 217 QREERRGSTYDIILTDPPKFGRGTHGEVWQLF-DHLPLMLDICREILSPKALGLVLTAYSI 276 (332)
T ss_dssp HHHHHHTCCBSEEEECCCSEEECTTCCEEEHH-HHHHHHHHHHHHTBCTTCCEEEEEECCT
T ss_pred HHHHhcCCCceEEEECCccccCCchHHHHHHH-HHHHHHHHHHHHhcCcCcEEEEEECCCC
Confidence 1100 0012257777665 2322 111 223445554 477899988777665444
No 205
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=30.13 E-value=96 Score=27.10 Aligned_cols=55 Identities=9% Similarity=0.016 Sum_probs=31.7
Q ss_pred HHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHH
Q 047247 174 AILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRM 237 (386)
Q Consensus 174 aILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL 237 (386)
.|++.+.-...-+|+|+|.|.|.--..|.+.+ .|.-++++++. +...++.+.+++
T Consensus 87 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~------~~~~~v~~~D~---~~~~~~~a~~~~ 141 (258)
T 2pwy_A 87 AMVTLLDLAPGMRVLEAGTGSGGLTLFLARAV------GEKGLVESYEA---RPHHLAQAERNV 141 (258)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHH------CTTSEEEEEES---CHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCEEEEECCCcCHHHHHHHHHh------CCCCEEEEEeC---CHHHHHHHHHHH
Confidence 45555554455589999999875333333332 13359999985 233444444443
No 206
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=29.70 E-value=1.2e+02 Score=26.28 Aligned_cols=52 Identities=4% Similarity=0.063 Sum_probs=31.8
Q ss_pred eeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHH
Q 047247 184 KLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEK 239 (386)
Q Consensus 184 ~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~ 239 (386)
.-+|+|+|.|.|..-..|.+.+... +..+.-++|+|+. +...++.+.+++.+
T Consensus 85 ~~~VLdiG~G~G~~~~~la~~~~~~-~~~~~~~v~~vD~---~~~~~~~a~~~~~~ 136 (227)
T 1r18_A 85 GARILDVGSGSGYLTACFYRYIKAK-GVDADTRIVGIEH---QAELVRRSKANLNT 136 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHHHS-CCCTTCEEEEEES---CHHHHHHHHHHHHH
T ss_pred CCEEEEECCCccHHHHHHHHhcccc-cCCccCEEEEEEc---CHHHHHHHHHHHHh
Confidence 3479999999887555555544321 2223469999995 33455555555544
No 207
>2j66_A BTRK, decarboxylase; butirosin, AHBA biosynthesis, lyase; HET: PLP; 1.65A {Bacillus circulans}
Probab=29.56 E-value=1.6e+02 Score=28.58 Aligned_cols=68 Identities=13% Similarity=0.142 Sum_probs=41.9
Q ss_pred CceeEE-eeccC--------------CCCC---ChHHHHHHHhcCCCCCCeeEEEEeccc--c--chHHHHHHHHHHHHH
Q 047247 182 ETKLHI-IDMSN--------------TLCT---QWPTLLEALATRNDETPHLKLTVVVTV--S--LVRLVMKEIGQRMEK 239 (386)
Q Consensus 182 ~~~VHI-IDf~i--------------~~G~---QWpsLiqaLA~R~~gpP~LRIT~I~~~--~--~~~~~l~etg~rL~~ 239 (386)
.-+||| ||-|+ .+|+ ++..+++.++.. |.|+|.||..- + ...+...+.-+++.+
T Consensus 132 ~~~V~lrvn~g~~~~~~~~~~~~~~srfG~~~~e~~~~~~~~~~~----~~l~l~Gl~~H~gs~~~~~~~~~~~~~~~~~ 207 (428)
T 2j66_A 132 TARVAIRINPDKSFGSTAIKMGGVPRQFGMDESMLDAVMDAVRSL----QFTKFIGIHVYTGTQNLNTDSIIESMKYTVD 207 (428)
T ss_dssp CEEEEEEEECSSCC--CCCSSSCCCCSSSEEGGGHHHHHHHHHHC----TTEEEEEEECCCCSCBCCHHHHHHHHHHHHH
T ss_pred CceEEEEEcCCCCCCCCccccCCCCCCCCCCHHHHHHHHHHHHhC----CCCCEEEEEEECCCCCCCHHHHHHHHHHHHH
Confidence 347888 89886 4675 677788877665 46999999652 1 112333344455555
Q ss_pred HHH----HcCCceEEEEe
Q 047247 240 FAR----LMGVPFEFKVI 253 (386)
Q Consensus 240 fA~----~lgipFeF~~v 253 (386)
+++ ..|+++++--+
T Consensus 208 ~~~~l~~~~g~~~~~l~~ 225 (428)
T 2j66_A 208 LGRNIYERYGIVCECINL 225 (428)
T ss_dssp HHHHHHHHHCCCCSEEEC
T ss_pred HHHHHHHHhCCCCCEEEe
Confidence 554 44877765443
No 208
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=29.08 E-value=73 Score=28.14 Aligned_cols=56 Identities=11% Similarity=0.048 Sum_probs=34.5
Q ss_pred ceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc--eEEEE
Q 047247 183 TKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP--FEFKV 252 (386)
Q Consensus 183 ~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip--FeF~~ 252 (386)
+.-+|+|+|.|.|.--..|.+.. |..++|||+. +...++.+.++ ++..|+. ++|..
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~-------~~~~v~gvD~---s~~~~~~a~~~----~~~~~~~~~v~~~~ 122 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATL-------NGWYFLATEV---DDMCFNYAKKN----VEQNNLSDLIKVVK 122 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHH-------HCCEEEEEES---CHHHHHHHHHH----HHHTTCTTTEEEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhC-------CCCeEEEEEC---CHHHHHHHHHH----HHHcCCCccEEEEE
Confidence 34589999999997555555443 2368999995 22345444443 3445664 55554
No 209
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=28.96 E-value=1e+02 Score=27.49 Aligned_cols=58 Identities=7% Similarity=-0.064 Sum_probs=33.6
Q ss_pred HHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHH
Q 047247 173 GAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEK 239 (386)
Q Consensus 173 qaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~ 239 (386)
..|++.+.-...-.|+|+|.|.|.- ...|+.+- .|..++++|+. +...++.+.+++.+
T Consensus 89 ~~i~~~~~~~~~~~vLdiG~G~G~~----~~~l~~~~--~~~~~v~~vD~---~~~~~~~a~~~~~~ 146 (280)
T 1i9g_A 89 AQIVHEGDIFPGARVLEAGAGSGAL----TLSLLRAV--GPAGQVISYEQ---RADHAEHARRNVSG 146 (280)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHH----HHHHHHHH--CTTSEEEEECS---CHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCEEEEEcccccHH----HHHHHHHh--CCCCEEEEEeC---CHHHHHHHHHHHHH
Confidence 3556666544455799999998753 33344321 13358999995 23345555444433
No 210
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=27.94 E-value=37 Score=35.64 Aligned_cols=192 Identities=10% Similarity=0.037 Sum_probs=100.1
Q ss_pred CceeEEeeccCCCCCChHHHHHHHhcCCC-----CCCeeEEEEeccccchHHHHHHHHHHHHH----HHHHcC------C
Q 047247 182 ETKLHIIDMSNTLCTQWPTLLEALATRND-----ETPHLKLTVVVTVSLVRLVMKEIGQRMEK----FARLMG------V 246 (386)
Q Consensus 182 ~~~VHIIDf~i~~G~QWpsLiqaLA~R~~-----gpP~LRIT~I~~~~~~~~~l~etg~rL~~----fA~~lg------i 246 (386)
....-||-+|.|+- ++--.|..... =|+.+++--|+.|. +-+.++++.+ ..+.++ +
T Consensus 106 ~~~~qvV~LGaGlD----tr~~Rl~~~~~~~~~~~~~~~~~~EvD~p~-----v~~~K~~~l~~~~~l~~~~~~~~~~~~ 176 (695)
T 2zwa_A 106 DKKIVVVNLGCGYD----PLPFQLLDTNNIQSQQYHDRVSFIDIDYSD-----LLKIKIELIKTIPELSKIIGLSEDKDY 176 (695)
T ss_dssp TSEEEEEEETCTTC----CHHHHHHCTTCGGGGGGSSSEEEEEEECHH-----HHHHHHHHHHHCHHHHHHTTCCSSCSS
T ss_pred CCCcEEEEcccccC----cceeeeeccCcccccccCCCCEEEECccHH-----HHHHHHHHHHcChHHHHhhcccccccc
Confidence 35789999999973 33334433311 03467777787653 2222222222 112222 1
Q ss_pred c----------eEEEEeecCCccccccc--c---cccc-CCCceEEEeecccccccccchHHHHHHHHHhcCCcEEEEee
Q 047247 247 P----------FEFKVITGLNRLVELTK--G---TLGV-KEDEAVAVNCIGALRRVAVEERGAVIQMFQSLKPKVVTIVE 310 (386)
Q Consensus 247 p----------FeF~~v~~~~~~e~l~~--~---~L~~-~~~EaLaVN~~~~Lh~l~~~~r~~vL~~ir~L~P~vvvlvE 310 (386)
. =.++.|.+ ++.+++. + ..+. +++...++-+..-|..|.....+.+|+.+..+.+..+++.|
T Consensus 177 ~~~~~~~~~~s~~y~~v~~--Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~~~~~~~~~~e 254 (695)
T 2zwa_A 177 VDDSNVDFLTTPKYLARPC--DLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSKMENSHFIILE 254 (695)
T ss_dssp CSCTTCCCEECSSEEEEEC--CTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHTSSSEEEEEEE
T ss_pred ccccccccccCCCeeEEeC--cCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhhCCCceEEEEE
Confidence 1 14666654 4554421 1 1234 67778888888889999888889999999999777777778
Q ss_pred ecCCCCCCccchHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHhhhc----c---ccccccccCCCCCccCCCCcccc
Q 047247 311 EEADLTSSRYDFVKCFEECLRFYTLYFEMLEESFVPTSNERLMLERECS----R---DIVRVLACDDDNNSSNNGNGDRE 383 (386)
Q Consensus 311 ~ea~~n~~~~~F~~RF~eaL~~YsalFDsLda~~~~~s~eR~~iE~~~g----~---eI~niVAcEG~~RvER~E~~~~W 383 (386)
+-. ...+...|.....+.+.--..-|.++..+-..+..+....+.-+. . +|-+.+..+...|+++.|.+..|
T Consensus 255 ~~~-~~~~~d~f~~~m~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~Gw~~v~~~~~~~~y~~~~~~e~~R~~~lE~ldE~ 333 (695)
T 2zwa_A 255 QLI-PKGPFEPFSKQMLAHFKRNDSPLQSVLKYNTIESQVQRFNKLGFAYVNVGDMFQLWESADEATKKELLKVEPFDEL 333 (695)
T ss_dssp ECC-TTCTTSHHHHHHHHHHHHTTCCCCGGGTCCSHHHHHHHHHHTTCCEEEEEEHHHHHHHSCHHHHHHHHHHSCCCCH
T ss_pred eec-CCCCCChHHHHHHHHHHHcCCCCCccccCCCHHHHHHHHHHCCCCCcceeeHHHHHhhCCHHHHHHHHhccccchH
Confidence 743 222222455544322211111133333322111112222222121 1 22233444555678888888877
Q ss_pred cc
Q 047247 384 EE 385 (386)
Q Consensus 384 ~~ 385 (386)
++
T Consensus 334 e~ 335 (695)
T 2zwa_A 334 EE 335 (695)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 211
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=27.91 E-value=61 Score=29.14 Aligned_cols=101 Identities=8% Similarity=-0.067 Sum_probs=51.7
Q ss_pred EEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc--eEEEEeecCCcccccc
Q 047247 186 HIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP--FEFKVITGLNRLVELT 263 (386)
Q Consensus 186 HIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip--FeF~~v~~~~~~e~l~ 263 (386)
+|+|+|.+.|.-=..|.+.+ |+.-+||+|+... ..++.+. +..+..|+. .+|..- +..++-
T Consensus 82 ~VLeiG~G~G~~~~~la~~~------~~~~~v~~iD~s~---~~~~~a~----~~~~~~g~~~~i~~~~g----da~~~l 144 (247)
T 1sui_A 82 NTMEIGVYTGYSLLATALAI------PEDGKILAMDINK---ENYELGL----PVIKKAGVDHKIDFREG----PALPVL 144 (247)
T ss_dssp EEEEECCGGGHHHHHHHHHS------CTTCEEEEEESCC---HHHHHHH----HHHHHTTCGGGEEEEES----CHHHHH
T ss_pred EEEEeCCCcCHHHHHHHHhC------CCCCEEEEEECCH---HHHHHHH----HHHHHcCCCCCeEEEEC----CHHHHH
Confidence 79999999886433333333 2236999999532 2333333 334456663 444432 222211
Q ss_pred ccccc-----cCCCceEEEeecccccccccchHHHHHH-HHHhcCCcEEEEeee
Q 047247 264 KGTLG-----VKEDEAVAVNCIGALRRVAVEERGAVIQ-MFQSLKPKVVTIVEE 311 (386)
Q Consensus 264 ~~~L~-----~~~~EaLaVN~~~~Lh~l~~~~r~~vL~-~ir~L~P~vvvlvE~ 311 (386)
+. +. -..=+.|+++... .. ...+|+ ..+-|+|.-+++++.
T Consensus 145 ~~-l~~~~~~~~~fD~V~~d~~~------~~-~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 145 DE-MIKDEKNHGSYDFIFVDADK------DN-YLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp HH-HHHSGGGTTCBSEEEECSCS------TT-HHHHHHHHHHHBCTTCCEEEEC
T ss_pred HH-HHhccCCCCCEEEEEEcCch------HH-HHHHHHHHHHhCCCCeEEEEec
Confidence 11 10 0112455555331 12 334554 456789998888765
No 212
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=27.56 E-value=2.9e+02 Score=23.56 Aligned_cols=33 Identities=6% Similarity=-0.111 Sum_probs=20.9
Q ss_pred eeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEecc
Q 047247 184 KLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVT 222 (386)
Q Consensus 184 ~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~ 222 (386)
.-.|+|+|.|.|.--..|.+.+ | |.-+++||+.
T Consensus 74 ~~~vLDlG~G~G~~~~~la~~~-----~-~~~~v~~vD~ 106 (227)
T 1g8a_A 74 GKSVLYLGIASGTTASHVSDIV-----G-WEGKIFGIEF 106 (227)
T ss_dssp TCEEEEETTTSTTHHHHHHHHH-----C-TTSEEEEEES
T ss_pred CCEEEEEeccCCHHHHHHHHHh-----C-CCeEEEEEEC
Confidence 3479999999987333333332 1 2248999985
No 213
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=27.36 E-value=81 Score=29.44 Aligned_cols=67 Identities=7% Similarity=-0.019 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHH
Q 047247 166 FGHVASNGAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFA 241 (386)
Q Consensus 166 fa~~tANqaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA 241 (386)
+.|-.....|++.+.-...-.|+|+|.|.|.-=..|.+.+ | |.-+++||+. +...++.+.+++.++-
T Consensus 88 ~~~~~~~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~-----g-~~~~v~~vD~---~~~~~~~a~~~~~~~~ 154 (336)
T 2b25_A 88 ITFPKDINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAV-----G-SQGRVISFEV---RKDHHDLAKKNYKHWR 154 (336)
T ss_dssp CCCHHHHHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHH-----C-TTCEEEEEES---SHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHh-----C-CCceEEEEeC---CHHHHHHHHHHHHHhh
Confidence 4445545566666654445589999999985433333332 1 3468999985 3345666666665543
No 214
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=26.60 E-value=72 Score=28.83 Aligned_cols=43 Identities=21% Similarity=0.115 Sum_probs=25.0
Q ss_pred HHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEecc
Q 047247 174 AILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVT 222 (386)
Q Consensus 174 aILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~ 222 (386)
.+++.+.-...-.|+|+|.|.|.--..|.+.+ .|..++|||+.
T Consensus 101 ~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~------~~~~~v~~vD~ 143 (275)
T 1yb2_A 101 YIIMRCGLRPGMDILEVGVGSGNMSSYILYAL------NGKGTLTVVER 143 (275)
T ss_dssp -----CCCCTTCEEEEECCTTSHHHHHHHHHH------TTSSEEEEECS
T ss_pred HHHHHcCCCCcCEEEEecCCCCHHHHHHHHHc------CCCCEEEEEEC
Confidence 55566554555689999999886444443333 13469999995
No 215
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=26.59 E-value=87 Score=27.94 Aligned_cols=49 Identities=14% Similarity=0.140 Sum_probs=31.6
Q ss_pred CCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHH
Q 047247 181 GETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEK 239 (386)
Q Consensus 181 g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~ 239 (386)
..+...|+|+|.|.|. ++..||.+. |...++||+. +...++.+.+++.+
T Consensus 44 ~~~~~~vLDiGcG~G~----~~~~la~~~---p~~~v~GiDi---s~~~l~~A~~~~~~ 92 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGG----LLVELSPLF---PDTLILGLEI---RVKVSDYVQDRIRA 92 (235)
T ss_dssp --CCEEEEEETCTTCH----HHHHHGGGS---TTSEEEEEES---CHHHHHHHHHHHHH
T ss_pred cCCCCeEEEEccCCcH----HHHHHHHHC---CCCeEEEEEC---CHHHHHHHHHHHHH
Confidence 4456789999999884 455667653 4468999995 33455555555544
No 216
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=26.31 E-value=2.9e+02 Score=26.34 Aligned_cols=107 Identities=9% Similarity=-0.029 Sum_probs=57.0
Q ss_pred EEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCC---ceEEEEeecCCccccc
Q 047247 186 HIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGV---PFEFKVITGLNRLVEL 262 (386)
Q Consensus 186 HIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgi---pFeF~~v~~~~~~e~l 262 (386)
.|+|+|.|.|.-- -.+|.+ | .-+++||+. +...++.+.++ ++..|+ ..+|..- ++.++
T Consensus 223 ~VLDl~cG~G~~s----l~la~~--g--~~~V~~vD~---s~~al~~a~~n----~~~ngl~~~~v~~~~~----D~~~~ 283 (396)
T 3c0k_A 223 RVLNCFSYTGGFA----VSALMG--G--CSQVVSVDT---SQEALDIARQN----VELNKLDLSKAEFVRD----DVFKL 283 (396)
T ss_dssp EEEEESCTTCSHH----HHHHHT--T--CSEEEEEES---CHHHHHHHHHH----HHHTTCCGGGEEEEES----CHHHH
T ss_pred eEEEeeccCCHHH----HHHHHC--C--CCEEEEEEC---CHHHHHHHHHH----HHHcCCCccceEEEEC----CHHHH
Confidence 6899999998622 233443 2 248999995 23345444333 445577 4555543 23332
Q ss_pred cccccc-cCCCceEEEeeccc------ccccccchHHHHHHHHHhcCCcEEEEeee
Q 047247 263 TKGTLG-VKEDEAVAVNCIGA------LRRVAVEERGAVIQMFQSLKPKVVTIVEE 311 (386)
Q Consensus 263 ~~~~L~-~~~~EaLaVN~~~~------Lh~l~~~~r~~vL~~ir~L~P~vvvlvE~ 311 (386)
...... -..=+.|++|.... ++.......+.+...++.|+|.-++++.-
T Consensus 284 ~~~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 339 (396)
T 3c0k_A 284 LRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFS 339 (396)
T ss_dssp HHHHHHTTCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHhcCCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 211000 01125777776541 22222333455666788999997666644
No 217
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=25.82 E-value=2.9e+02 Score=25.82 Aligned_cols=110 Identities=15% Similarity=0.037 Sum_probs=56.6
Q ss_pred HHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc-eEEEEe
Q 047247 175 ILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP-FEFKVI 253 (386)
Q Consensus 175 ILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip-FeF~~v 253 (386)
++....-...-.|+|.|.|.|. +.-.++.+. .|..+|+|++.. ...++.+.++ ++..|++ .+|..-
T Consensus 195 l~~~~~~~~~~~vLD~gcGsG~----~~ie~a~~~--~~~~~v~g~Di~---~~~i~~a~~n----~~~~g~~~i~~~~~ 261 (354)
T 3tma_A 195 LLRLADARPGMRVLDPFTGSGT----IALEAASTL--GPTSPVYAGDLD---EKRLGLAREA----ALASGLSWIRFLRA 261 (354)
T ss_dssp HHHHTTCCTTCCEEESSCTTSH----HHHHHHHHH--CTTSCEEEEESC---HHHHHHHHHH----HHHTTCTTCEEEEC
T ss_pred HHHHhCCCCCCEEEeCCCCcCH----HHHHHHHhh--CCCceEEEEECC---HHHHHHHHHH----HHHcCCCceEEEeC
Confidence 4444443444579999999984 333333331 135789999852 2344444333 4456765 444332
Q ss_pred ecCCccccccccccccCCCceEEEeecccccccccc----hHHHHHHHH-HhcCCc
Q 047247 254 TGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVE----ERGAVIQMF-QSLKPK 304 (386)
Q Consensus 254 ~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~----~r~~vL~~i-r~L~P~ 304 (386)
++.++.... ..-+.|+.|-.+........ --..+++.+ +.|+|.
T Consensus 262 ----D~~~~~~~~---~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~Lkpg 310 (354)
T 3tma_A 262 ----DARHLPRFF---PEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPG 310 (354)
T ss_dssp ----CGGGGGGTC---CCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTT
T ss_pred ----ChhhCcccc---CCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCC
Confidence 344443221 11268888887754322111 124566655 456785
No 218
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=25.26 E-value=51 Score=31.17 Aligned_cols=45 Identities=11% Similarity=0.081 Sum_probs=31.1
Q ss_pred eEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHH
Q 047247 185 LHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEK 239 (386)
Q Consensus 185 VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~ 239 (386)
=.|+|+|.|.|..-..|++.+ + ..+++||+. +...++.+.+++..
T Consensus 28 ~~vLD~g~G~G~~s~~la~~~---~----~~~VigvD~---d~~al~~A~~~~~~ 72 (301)
T 1m6y_A 28 KIILDCTVGEGGHSRAILEHC---P----GCRIIGIDV---DSEVLRIAEEKLKE 72 (301)
T ss_dssp CEEEETTCTTSHHHHHHHHHC---T----TCEEEEEES---CHHHHHHHHHHTGG
T ss_pred CEEEEEeCCcCHHHHHHHHHC---C----CCEEEEEEC---CHHHHHHHHHHHHh
Confidence 479999999987766666554 1 358999995 33456666666544
No 219
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=24.95 E-value=1.1e+02 Score=28.01 Aligned_cols=42 Identities=10% Similarity=0.078 Sum_probs=31.2
Q ss_pred CCceeEEeeccCCCCCChHHHHHHH---hc-CCCCC-CeeEEEEecc
Q 047247 181 GETKLHIIDMSNTLCTQWPTLLEAL---AT-RNDET-PHLKLTVVVT 222 (386)
Q Consensus 181 g~~~VHIIDf~i~~G~QWpsLiqaL---A~-R~~gp-P~LRIT~I~~ 222 (386)
+.+..+|+|+|.|.|..=..++++. .. .|.++ ..+++++|+.
T Consensus 58 ~~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~ 104 (257)
T 2qy6_A 58 PHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEK 104 (257)
T ss_dssp SSSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEES
T ss_pred CCCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEEC
Confidence 6678999999999998777777765 21 34332 3799999985
No 220
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=24.78 E-value=93 Score=27.18 Aligned_cols=105 Identities=10% Similarity=0.084 Sum_probs=53.3
Q ss_pred HHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc-eEEEE
Q 047247 174 AILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP-FEFKV 252 (386)
Q Consensus 174 aILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip-FeF~~ 252 (386)
.+++.+.-...-.|+|+|.|.|..-..|.+.. + .++|+|+. +...++.+.+++ +..|++ .+|..
T Consensus 82 ~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~------~--~~v~~vD~---~~~~~~~a~~~~----~~~~~~~v~~~~ 146 (235)
T 1jg1_A 82 IMLEIANLKPGMNILEVGTGSGWNAALISEIV------K--TDVYTIER---IPELVEFAKRNL----ERAGVKNVHVIL 146 (235)
T ss_dssp HHHHHHTCCTTCCEEEECCTTSHHHHHHHHHH------C--SCEEEEES---CHHHHHHHHHHH----HHTTCCSEEEEE
T ss_pred HHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHh------C--CEEEEEeC---CHHHHHHHHHHH----HHcCCCCcEEEE
Confidence 34455543444579999999875444443333 1 58999985 223444444433 345553 44432
Q ss_pred eecCCcc-ccccccccccCCCceEEEeecccccccccchHHHHHHHHHhcCCcEEEEee
Q 047247 253 ITGLNRL-VELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMFQSLKPKVVTIVE 310 (386)
Q Consensus 253 v~~~~~~-e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~ir~L~P~vvvlvE 310 (386)
- ++ ..+... .+=+.|+++.. ++++.. ...+.|+|.-.+++.
T Consensus 147 ~----d~~~~~~~~----~~fD~Ii~~~~--~~~~~~-------~~~~~L~pgG~lvi~ 188 (235)
T 1jg1_A 147 G----DGSKGFPPK----APYDVIIVTAG--APKIPE-------PLIEQLKIGGKLIIP 188 (235)
T ss_dssp S----CGGGCCGGG----CCEEEEEECSB--BSSCCH-------HHHHTEEEEEEEEEE
T ss_pred C----CcccCCCCC----CCccEEEECCc--HHHHHH-------HHHHhcCCCcEEEEE
Confidence 2 22 111100 11145555443 565542 345778898666554
No 221
>4ecl_A Serine racemase, vantg; antibiotic resistance, vancomycin resistance, center for STR genomics of infectious diseases (csgid); HET: MSE; 2.02A {Enterococcus faecalis}
Probab=24.73 E-value=2.7e+02 Score=26.84 Aligned_cols=37 Identities=27% Similarity=0.255 Sum_probs=27.0
Q ss_pred CceeEE-eeccCC-CCC--ChHHHHHHHhcCCCCCCeeEEEEecc
Q 047247 182 ETKLHI-IDMSNT-LCT--QWPTLLEALATRNDETPHLKLTVVVT 222 (386)
Q Consensus 182 ~~~VHI-IDf~i~-~G~--QWpsLiqaLA~R~~gpP~LRIT~I~~ 222 (386)
.-+||| ||-|+. .|+ ++..+++.+..- |.|+|.||-.
T Consensus 119 ~~~v~lkvdtGm~R~G~~~e~~~~~~~i~~~----~~l~l~Gl~t 159 (374)
T 4ecl_A 119 DIKAHIKIDTGMHRLGFSTEDKDKILAAFSL----KHIKVAGIFT 159 (374)
T ss_dssp CEEEEEEEESSSCSSSEESSCHHHHHHHTTC----TTEEEEEEEC
T ss_pred CccEEEEEcCCCCcCccCHHHHHHHHHHHhC----CCceEEEEEE
Confidence 346888 898875 464 677888887544 5699999954
No 222
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=23.18 E-value=2e+02 Score=24.84 Aligned_cols=43 Identities=16% Similarity=0.102 Sum_probs=26.3
Q ss_pred HHH---HhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEecc
Q 047247 173 GAI---LEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVT 222 (386)
Q Consensus 173 qaI---LeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~ 222 (386)
..| ++.+.-...-.|+|+|.|.|. +...|+.+-+ .-+++||+.
T Consensus 61 ~~i~~~l~~~~~~~~~~VLDlGcG~G~----~~~~la~~~~---~~~v~gvD~ 106 (230)
T 1fbn_A 61 AAIIKGLKVMPIKRDSKILYLGASAGT----TPSHVADIAD---KGIVYAIEY 106 (230)
T ss_dssp HHHHTTCCCCCCCTTCEEEEESCCSSH----HHHHHHHHTT---TSEEEEEES
T ss_pred HHHHhcccccCCCCCCEEEEEcccCCH----HHHHHHHHcC---CcEEEEEEC
Confidence 556 444332334479999999985 3334444422 358999995
No 223
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=22.52 E-value=4.7e+02 Score=25.48 Aligned_cols=64 Identities=17% Similarity=0.241 Sum_probs=37.0
Q ss_pred HHHHHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCc
Q 047247 171 SNGAILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVP 247 (386)
Q Consensus 171 ANqaILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgip 247 (386)
+.+.+.+.+.-...-+|+|+|.|.|.-=..|.+.+ + ..-+|+|++. +...++.+. +-++++|++
T Consensus 247 ~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~---~---~~~~v~a~D~---s~~~l~~~~----~~~~~~g~~ 310 (450)
T 2yxl_A 247 ASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELM---K---NKGKIYAFDV---DKMRMKRLK----DFVKRMGIK 310 (450)
T ss_dssp HHHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHT---T---TCSEEEEECS---CHHHHHHHH----HHHHHTTCC
T ss_pred hhHHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHc---C---CCCEEEEEcC---CHHHHHHHH----HHHHHcCCC
Confidence 34445555554444579999999986444333332 1 2358999985 233454333 445567774
No 224
>1yz7_A Probable translation initiation factor 2 alpha subunit; helical domain, alpha-beta domain; 2.26A {Pyrococcus abyssi}
Probab=22.37 E-value=1.3e+02 Score=26.65 Aligned_cols=43 Identities=9% Similarity=0.165 Sum_probs=33.3
Q ss_pred CCCeeEEEEeccccc-hHHHHHHHHHHHHHHHHHcCCceEEEEe
Q 047247 211 ETPHLKLTVVVTVSL-VRLVMKEIGQRMEKFARLMGVPFEFKVI 253 (386)
Q Consensus 211 gpP~LRIT~I~~~~~-~~~~l~etg~rL~~fA~~lgipFeF~~v 253 (386)
|||.-|||...+.-. .-..|+++-+.+.+..+..|-.|.|+--
T Consensus 133 gaP~Y~i~~~~~Dkk~g~~~L~~aie~i~~~I~~~gG~~~v~r~ 176 (188)
T 1yz7_A 133 GAPRYRIDITAPDYYKAEEVLESIAEEILRVIKEAGGEATLLRK 176 (188)
T ss_dssp STTEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred cCcEEEEEEeeCCHHHHHHHHHHHHHHHHHHHHHhCCEEEEEEc
Confidence 778777777765321 2357889999999999999999998764
No 225
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=21.17 E-value=3.9e+02 Score=22.82 Aligned_cols=109 Identities=12% Similarity=0.018 Sum_probs=53.4
Q ss_pred HHHhhcCCCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEe
Q 047247 174 AILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVI 253 (386)
Q Consensus 174 aILeA~~g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v 253 (386)
.|++.+.-...-.|+|+|.|.|. +...|+.+ + .++++|+. +...++.+.+++ +..|+.-....+
T Consensus 82 ~~~~~~~~~~~~~vldiG~G~G~----~~~~l~~~-~----~~v~~vD~---~~~~~~~a~~~~----~~~~~~~~~~~~ 145 (248)
T 2yvl_A 82 YIALKLNLNKEKRVLEFGTGSGA----LLAVLSEV-A----GEVWTFEA---VEEFYKTAQKNL----KKFNLGKNVKFF 145 (248)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSH----HHHHHHHH-S----SEEEEECS---CHHHHHHHHHHH----HHTTCCTTEEEE
T ss_pred HHHHhcCCCCCCEEEEeCCCccH----HHHHHHHh-C----CEEEEEec---CHHHHHHHHHHH----HHcCCCCcEEEE
Confidence 44555543344589999999774 23334443 2 48999985 233444444333 334652122223
Q ss_pred ecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHHHhcCCcEEEEeee
Q 047247 254 TGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMFQSLKPKVVTIVEE 311 (386)
Q Consensus 254 ~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~ir~L~P~vvvlvE~ 311 (386)
.. ++.+... .-..=+.|+.|. .++...+-...+.|+|.-.+++..
T Consensus 146 ~~--d~~~~~~---~~~~~D~v~~~~--------~~~~~~l~~~~~~L~~gG~l~~~~ 190 (248)
T 2yvl_A 146 NV--DFKDAEV---PEGIFHAAFVDV--------REPWHYLEKVHKSLMEGAPVGFLL 190 (248)
T ss_dssp CS--CTTTSCC---CTTCBSEEEECS--------SCGGGGHHHHHHHBCTTCEEEEEE
T ss_pred Ec--Chhhccc---CCCcccEEEECC--------cCHHHHHHHHHHHcCCCCEEEEEe
Confidence 21 2333210 001113444432 234344444556789986666643
No 226
>3cpg_A Uncharacterized protein; unknown protein, TIM barrel, monomer, structural genomics, PSI-2, protein structure initiative; 1.71A {Bifidobacterium adolescentis ATCC15703}
Probab=21.06 E-value=2.1e+02 Score=26.21 Aligned_cols=36 Identities=11% Similarity=0.134 Sum_probs=26.2
Q ss_pred ceeEE-eeccC--C-CCC---ChHHHHHHHhcCCCCCCeeEEEEecc
Q 047247 183 TKLHI-IDMSN--T-LCT---QWPTLLEALATRNDETPHLKLTVVVT 222 (386)
Q Consensus 183 ~~VHI-IDf~i--~-~G~---QWpsLiqaLA~R~~gpP~LRIT~I~~ 222 (386)
-.||| ||-|. + .|+ ++..+++.+..- |.|+|.||-.
T Consensus 161 ~~V~lkVdtGme~~R~G~~~ee~~~l~~~i~~~----~~l~l~Gl~t 203 (282)
T 3cpg_A 161 VGVLLEVNESGEESKSGCDPAHAIRIAQKIGTL----DGIELQGLMT 203 (282)
T ss_dssp EEEEEEBCCSSCTTSSSBCGGGHHHHHHHHHTC----TTEEEEEEEC
T ss_pred ceEEEEEECCCCCCCCCcCHHHHHHHHHHHHhC----CCceEEeEEE
Confidence 37898 99987 4 676 456667777543 5699999954
No 227
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=20.55 E-value=84 Score=28.23 Aligned_cols=94 Identities=17% Similarity=0.105 Sum_probs=49.4
Q ss_pred eEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEEeecCCccccccc
Q 047247 185 LHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKVITGLNRLVELTK 264 (386)
Q Consensus 185 VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~v~~~~~~e~l~~ 264 (386)
-.|+|+|.|.|. +...++.+ |+ +++||+... ..++.+.++ ++..|+.++|..- ++.+.
T Consensus 122 ~~VLDiGcG~G~----l~~~la~~--g~---~v~gvDi~~---~~v~~a~~n----~~~~~~~v~~~~~----d~~~~-- 179 (254)
T 2nxc_A 122 DKVLDLGTGSGV----LAIAAEKL--GG---KALGVDIDP---MVLPQAEAN----AKRNGVRPRFLEG----SLEAA-- 179 (254)
T ss_dssp CEEEEETCTTSH----HHHHHHHT--TC---EEEEEESCG---GGHHHHHHH----HHHTTCCCEEEES----CHHHH--
T ss_pred CEEEEecCCCcH----HHHHHHHh--CC---eEEEEECCH---HHHHHHHHH----HHHcCCcEEEEEC----Chhhc--
Confidence 479999999885 33445554 43 999998632 234333333 3445666444321 23321
Q ss_pred cccccCCCceEEEeecccccccccchHHHHHHHH-HhcCCcEEEEe
Q 047247 265 GTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMF-QSLKPKVVTIV 309 (386)
Q Consensus 265 ~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~i-r~L~P~vvvlv 309 (386)
+.-..=+.|+.|.. .| ....++..+ +.|+|.-.+++
T Consensus 180 --~~~~~fD~Vv~n~~--~~-----~~~~~l~~~~~~LkpgG~lil 216 (254)
T 2nxc_A 180 --LPFGPFDLLVANLY--AE-----LHAALAPRYREALVPGGRALL 216 (254)
T ss_dssp --GGGCCEEEEEEECC--HH-----HHHHHHHHHHHHEEEEEEEEE
T ss_pred --CcCCCCCEEEECCc--HH-----HHHHHHHHHHHHcCCCCEEEE
Confidence 11112245665543 22 234455544 56899866555
No 228
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=20.46 E-value=3.9e+02 Score=22.59 Aligned_cols=55 Identities=4% Similarity=-0.124 Sum_probs=31.9
Q ss_pred ceeEEeeccCC-CCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEE
Q 047247 183 TKLHIIDMSNT-LCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKV 252 (386)
Q Consensus 183 ~~VHIIDf~i~-~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~ 252 (386)
+.-.|+|+|.| .|. +...|+.+. ..++|||+. +...++.+.+ -++..|+.++|..
T Consensus 55 ~~~~vLDlG~G~~G~----~~~~la~~~----~~~v~~vD~---s~~~~~~a~~----~~~~~~~~v~~~~ 110 (230)
T 3evz_A 55 GGEVALEIGTGHTAM----MALMAEKFF----NCKVTATEV---DEEFFEYARR----NIERNNSNVRLVK 110 (230)
T ss_dssp SSCEEEEECCTTTCH----HHHHHHHHH----CCEEEEEEC---CHHHHHHHHH----HHHHTTCCCEEEE
T ss_pred CCCEEEEcCCCHHHH----HHHHHHHhc----CCEEEEEEC---CHHHHHHHHH----HHHHhCCCcEEEe
Confidence 34579999999 885 223344432 258999995 2234444433 3455666555544
No 229
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=20.18 E-value=96 Score=27.84 Aligned_cols=52 Identities=12% Similarity=0.034 Sum_probs=41.6
Q ss_pred hHHHHHHHHHhcCCcEEEEeeecCCCCCCccchHHHHHHHHHHHHHHHHHhhhc
Q 047247 290 ERGAVIQMFQSLKPKVVTIVEEEADLTSSRYDFVKCFEECLRFYTLYFEMLEES 343 (386)
Q Consensus 290 ~r~~vL~~ir~L~P~vvvlvE~ea~~n~~~~~F~~RF~eaL~~YsalFDsLda~ 343 (386)
+.+.+++.+++.+.+..+.+|.+...... .-.+-+.+++.|...+++.|-.|
T Consensus 239 d~~~~~~~L~~~gy~g~~~lE~~~~~~~~--~~~~~~~~s~~~l~~l~~~~~~~ 290 (290)
T 3tva_A 239 GMEAYLTTLWEIGYRGPLTIEREIPHDPV--QQKKDLASALELLTGLRKKIANC 290 (290)
T ss_dssp CHHHHHHHHHHTTCCSCEEECCCCTTSHH--HHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHcCCCCcEEEEEecCCChh--hHHHHHHHHHHHHHHHHHHhcCC
Confidence 46789999999999988889987654322 46788999999999999887543
No 230
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=20.08 E-value=3e+02 Score=24.84 Aligned_cols=123 Identities=13% Similarity=-0.011 Sum_probs=60.7
Q ss_pred hcCchH-HHHHHHHHHHHHhhcC---CCceeEEeeccCCCCCChHHHHHHHhcCCCCCCeeEEEEeccccchHHHHHHHH
Q 047247 159 EVSPWT-TFGHVASNGAILEALD---GETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVTVSLVRLVMKEIG 234 (386)
Q Consensus 159 ~~~P~~-kfa~~tANqaILeA~~---g~~~VHIIDf~i~~G~QWpsLiqaLA~R~~gpP~LRIT~I~~~~~~~~~l~etg 234 (386)
...|+- |+| .+|+..++ =+.-=+|+|+|.|.|.-=.. ||.+-| |.=+++||+.. ...+
T Consensus 54 ~w~p~rskla-----a~i~~gl~~l~ikpG~~VldlG~G~G~~~~~----la~~VG--~~G~V~avD~s---~~~~---- 115 (233)
T 4df3_A 54 EWNAYRSKLA-----AALLKGLIELPVKEGDRILYLGIASGTTASH----MSDIIG--PRGRIYGVEFA---PRVM---- 115 (233)
T ss_dssp ECCTTTCHHH-----HHHHTTCSCCCCCTTCEEEEETCTTSHHHHH----HHHHHC--TTCEEEEEECC---HHHH----
T ss_pred eECCCchHHH-----HHHHhchhhcCCCCCCEEEEecCcCCHHHHH----HHHHhC--CCceEEEEeCC---HHHH----
Confidence 455654 444 35554433 34445899999999854333 444311 34589999852 2233
Q ss_pred HHHHHHHHHcCCceEEEEeecCCccccccccccccCCCceEEEeecccccccccchHHHHHHHHHhcCCcEEEEe
Q 047247 235 QRMEKFARLMGVPFEFKVITGLNRLVELTKGTLGVKEDEAVAVNCIGALRRVAVEERGAVIQMFQSLKPKVVTIV 309 (386)
Q Consensus 235 ~rL~~fA~~lgipFeF~~v~~~~~~e~l~~~~L~~~~~EaLaVN~~~~Lh~l~~~~r~~vL~~ir~L~P~vvvlv 309 (386)
+.|.+-|+..+ . ...|.. +.. ++.......+-+=+|-+.+..| ..++..+.+.-+.|+|.-.+++
T Consensus 116 ~~l~~~a~~~~-n--i~~V~~--d~~--~p~~~~~~~~~vDvVf~d~~~~---~~~~~~l~~~~r~LKpGG~lvI 180 (233)
T 4df3_A 116 RDLLTVVRDRR-N--IFPILG--DAR--FPEKYRHLVEGVDGLYADVAQP---EQAAIVVRNARFFLRDGGYMLM 180 (233)
T ss_dssp HHHHHHSTTCT-T--EEEEES--CTT--CGGGGTTTCCCEEEEEECCCCT---THHHHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHhhHhhc-C--eeEEEE--ecc--CccccccccceEEEEEEeccCC---hhHHHHHHHHHHhccCCCEEEE
Confidence 34455555443 1 122321 121 2222222333343455554433 2334444445578999865544
No 231
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=20.04 E-value=1.9e+02 Score=21.55 Aligned_cols=35 Identities=20% Similarity=0.407 Sum_probs=21.5
Q ss_pred CeeEEEEeccccchHHHHHHHHHHHHHHHHHcCCceEEEE
Q 047247 213 PHLKLTVVVTVSLVRLVMKEIGQRMEKFARLMGVPFEFKV 252 (386)
Q Consensus 213 P~LRIT~I~~~~~~~~~l~etg~rL~~fA~~lgipFeF~~ 252 (386)
-.+|||||.. ..-++....-...|+.+||...|..
T Consensus 42 leiritgvpe-----qvrkelakeaerlakefnitvtyti 76 (85)
T 2kl8_A 42 LEIRITGVPE-----QVRKELAKEAERLAKEFNITVTYTI 76 (85)
T ss_dssp EEEEEESCCH-----HHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred eEEEEecChH-----HHHHHHHHHHHHHHHhcCeEEEEEE
Confidence 3789999952 1233334444455777888877654
Done!