Query 047252
Match_columns 105
No_of_seqs 110 out of 821
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 16:03:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047252.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047252hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ljo_A Non-specific lipid-tran 100.0 6.3E-34 2.1E-38 181.8 0.8 90 16-105 1-90 (93)
2 1bwo_A NS-LTP1, nonspecific li 100.0 2.9E-32 1E-36 173.1 0.6 89 17-105 1-89 (90)
3 1afh_A Maize nonspecific lipid 100.0 8.6E-32 2.9E-36 171.8 1.4 90 16-105 1-91 (93)
4 1t12_A LTP 1, nonspecific lipi 100.0 7.4E-32 2.5E-36 171.5 1.0 89 16-105 1-89 (91)
5 1siy_A LTP 1, NS-LTP1, nonspec 100.0 1.4E-31 4.8E-36 170.2 2.0 89 17-105 1-89 (91)
6 2alg_A Non-specific lipid tran 100.0 1.2E-31 4.2E-36 170.8 -0.3 90 16-105 1-90 (92)
7 2rkn_A DIR1 protein, AT5G48485 99.6 1.8E-17 6.2E-22 101.8 0.5 70 16-96 2-76 (77)
8 1n89_A Lipid transfer protein; 99.5 4.7E-16 1.6E-20 93.3 0.1 58 25-94 6-65 (67)
9 1l6h_A LTP2, non-specific lipi 99.5 8.5E-16 2.9E-20 92.7 -0.3 63 18-94 2-66 (69)
10 1hyp_A Hydrophobic protein fro 91.9 0.047 1.6E-06 33.2 0.9 68 25-104 10-78 (80)
11 3ob4_A Conglutin, maltose ABC 86.7 0.043 1.5E-06 42.4 -2.7 54 41-100 429-493 (500)
12 1hss_A 0.19 alpha-amylase inhi 77.6 0.32 1.1E-05 31.8 -0.8 61 24-94 15-104 (124)
13 1s6d_A Albumin 8; all helix, f 63.7 2.1 7.1E-05 26.8 0.7 69 16-92 8-97 (103)
14 2lvf_A 2S albumin; allergen, c 45.0 11 0.00039 23.7 1.9 61 25-93 17-102 (114)
15 1ag7_A Conotoxin GS; neurotoxi 33.2 6.6 0.00023 19.2 -0.5 12 38-49 8-19 (34)
16 2ds2_B Sweet protein mabinlin- 31.9 21 0.00073 20.6 1.5 44 41-92 8-62 (72)
17 1pnb_B Napin BNIB; napin IA an 30.4 15 0.00051 21.4 0.7 48 39-94 10-67 (75)
18 1psy_A 2S albumin, RICC3; albu 28.6 27 0.00094 22.3 1.7 71 18-96 17-121 (125)
19 1eyo_A Conotoxin TVIIA; cystin 26.9 11 0.00038 18.0 -0.3 12 38-49 8-19 (30)
No 1
>2ljo_A Non-specific lipid-transfer protein 2; lipid transport; NMR {Lens culinaris}
Probab=99.97 E-value=6.3e-34 Score=181.83 Aligned_cols=90 Identities=43% Similarity=0.901 Sum_probs=85.4
Q ss_pred CCCchhhhccccccHHHHcCCCCCChhhhhhhhhccccCCCcccccccceeeccccccCCCCCHHHHhhchhcCCCCCCC
Q 047252 16 AVTCGQVDASLASCISYLTAGGSPSAVCCDGLKNLKTITPPTADRRAACDCVKAAAARYPNIKEDAASSLPTKCGVQMNI 95 (105)
Q Consensus 16 ~~~C~~~~~~l~~C~~yl~~~~~P~~~CC~~l~~l~~~a~t~~~~~~~C~Cl~~~~~~~~~in~~~a~~LP~~Cgv~~pf 95 (105)
+++|+++...|.||++||+|++.|++.||+|+++|++.++|+.|||++|+|+|+.+..+++||.+|+++||++|||++||
T Consensus 1 AisC~~v~~~L~pCl~Yv~g~~~p~~~CC~gv~~l~~~a~t~~dr~~~C~clk~~a~~~~~in~~~a~~LP~~CgV~~p~ 80 (93)
T 2ljo_A 1 AISCGAVTSDLSPCLTYLTGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIPY 80 (93)
T ss_dssp CCSSHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHGGGCTTCCHHHHHHHHHHHTCCCSS
T ss_pred CCCHHHHHHHHHhHHHHHcCCCCCCCchhhHHHHHHHHhcCcccHHHHHHhHHhhhhccCCcCHHHHHhhhHhcCCCCCC
Confidence 47899999999999999998888999999999999999999999999999999877777789999999999999999999
Q ss_pred CCCCCccCCC
Q 047252 96 PISRSTNCAK 105 (105)
Q Consensus 96 ~i~~~~dC~~ 105 (105)
|||+++||++
T Consensus 81 ~Is~~~dC~~ 90 (93)
T 2ljo_A 81 KISTTTNCNT 90 (93)
T ss_dssp CCSTTCCGGG
T ss_pred CCCCCCCCCC
Confidence 9999999985
No 2
>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A*
Probab=99.97 E-value=2.9e-32 Score=173.06 Aligned_cols=89 Identities=42% Similarity=0.904 Sum_probs=83.5
Q ss_pred CCchhhhccccccHHHHcCCCCCChhhhhhhhhccccCCCcccccccceeeccccccCCCCCHHHHhhchhcCCCCCCCC
Q 047252 17 VTCGQVDASLASCISYLTAGGSPSAVCCDGLKNLKTITPPTADRRAACDCVKAAAARYPNIKEDAASSLPTKCGVQMNIP 96 (105)
Q Consensus 17 ~~C~~~~~~l~~C~~yl~~~~~P~~~CC~~l~~l~~~a~t~~~~~~~C~Cl~~~~~~~~~in~~~a~~LP~~Cgv~~pf~ 96 (105)
++|+++...|.||++|++|++.|+++||+++|+|+++|+|+.|||..|+|+++....+++||.++|++||++||+++|||
T Consensus 1 i~C~~v~~~L~pCl~y~~~~~~Ps~~CC~~lk~l~~~a~t~~dr~~~ClClk~~~~~~~~in~~~A~~LP~~C~v~~p~~ 80 (90)
T 1bwo_A 1 IDCGHVDSLVRPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYT 80 (90)
T ss_dssp CCHHHHHHHHGGGHHHHTTCSCCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHTTCTTCCHHHHHTHHHHHTCCCSSC
T ss_pred CCHHHHHHhhcccHHHHcCCCCCCHHHhHHHHHHHhhccCCCCCCccCcCccCchhccCCcCHHHHHHHHHHcCCCCCCC
Confidence 47999999999999999987679999999999999999999999999999988777776899999999999999999999
Q ss_pred CCCCccCCC
Q 047252 97 ISRSTNCAK 105 (105)
Q Consensus 97 i~~~~dC~~ 105 (105)
||+++||++
T Consensus 81 is~~~dC~~ 89 (90)
T 1bwo_A 81 ISLNIDCSR 89 (90)
T ss_dssp CCTTCCGGG
T ss_pred CCCCCCCCC
Confidence 999999985
No 3
>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A*
Probab=99.96 E-value=8.6e-32 Score=171.79 Aligned_cols=90 Identities=48% Similarity=0.935 Sum_probs=83.6
Q ss_pred CCCchhhhccccccHHHHcCCC-CCChhhhhhhhhccccCCCcccccccceeeccccccCCCCCHHHHhhchhcCCCCCC
Q 047252 16 AVTCGQVDASLASCISYLTAGG-SPSAVCCDGLKNLKTITPPTADRRAACDCVKAAAARYPNIKEDAASSLPTKCGVQMN 94 (105)
Q Consensus 16 ~~~C~~~~~~l~~C~~yl~~~~-~P~~~CC~~l~~l~~~a~t~~~~~~~C~Cl~~~~~~~~~in~~~a~~LP~~Cgv~~p 94 (105)
+++|+++...|.||++|++|++ .|+++||+++|+|+++|+|+.|||..|+|++.....+++||.++|++||++||+++|
T Consensus 1 a~~C~~v~~~L~pCl~y~~~~~~~Ps~~CC~gv~~l~~~a~t~~dr~~~ClC~~~~~~~~~~in~~~A~~LP~~C~v~~p 80 (93)
T 1afh_A 1 AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIP 80 (93)
T ss_dssp CCSSHHHHHHHGGGHHHHTTSCCSCCHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHCCCS
T ss_pred CCChHHHHHhccCcHHHHcCCCCCChHHHHHHHHHHHHhhcCCCCCcccCEeeccccccccCcCHHHHHHHHHHcCCCCC
Confidence 3689999999999999999866 577899999999999999999999999999877777778999999999999999999
Q ss_pred CCCCCCccCCC
Q 047252 95 IPISRSTNCAK 105 (105)
Q Consensus 95 f~i~~~~dC~~ 105 (105)
||||++|||++
T Consensus 81 ~~is~~~dC~~ 91 (93)
T 1afh_A 81 YTISTSTDCSR 91 (93)
T ss_dssp SCCSTTCCSSS
T ss_pred CCCCCCCCCcc
Confidence 99999999986
No 4
>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum}
Probab=99.96 E-value=7.4e-32 Score=171.54 Aligned_cols=89 Identities=44% Similarity=0.835 Sum_probs=82.5
Q ss_pred CCCchhhhccccccHHHHcCCCCCChhhhhhhhhccccCCCcccccccceeeccccccCCCCCHHHHhhchhcCCCCCCC
Q 047252 16 AVTCGQVDASLASCISYLTAGGSPSAVCCDGLKNLKTITPPTADRRAACDCVKAAAARYPNIKEDAASSLPTKCGVQMNI 95 (105)
Q Consensus 16 ~~~C~~~~~~l~~C~~yl~~~~~P~~~CC~~l~~l~~~a~t~~~~~~~C~Cl~~~~~~~~~in~~~a~~LP~~Cgv~~pf 95 (105)
+++|+++...|.||++|++|++.|+ +||+++|+|++.|+|+.|||..|+|+++.+..+++||.++|++||++||+++||
T Consensus 1 a~~C~~v~~~L~pCl~y~~~~~~P~-~CC~gv~~l~~~a~t~~dr~~~ClClk~~~~~~~~in~~~A~~LP~~C~v~~p~ 79 (91)
T 1t12_A 1 AITCGQVTSNLAPCLAYLRNTGPLG-RCCGGVKALVNSARTTEDRQIACTCLKSAAGAISGINLGKAAGLPSTCGVNIPY 79 (91)
T ss_dssp CCCHHHHHHHTHHHHHHHTTSSCCT-THHHHHHHHHHTTCSTHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTTCCCSS
T ss_pred CCChHHHHHhccCcHHHHcCCCChH-HHHHHHHHHHhhccCCCCCCccCCCccccccccCCcChhHHHHHHHHcCCCCCC
Confidence 3689999999999999999865677 999999999999999999999999998776777689999999999999999999
Q ss_pred CCCCCccCCC
Q 047252 96 PISRSTNCAK 105 (105)
Q Consensus 96 ~i~~~~dC~~ 105 (105)
|||++|||++
T Consensus 80 ~is~~~dC~~ 89 (91)
T 1t12_A 80 KISPSTDCSK 89 (91)
T ss_dssp CSSSSSCCTT
T ss_pred CCCCCCCCcc
Confidence 9999999986
No 5
>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var}
Probab=99.96 E-value=1.4e-31 Score=170.19 Aligned_cols=89 Identities=48% Similarity=0.890 Sum_probs=83.3
Q ss_pred CCchhhhccccccHHHHcCCCCCChhhhhhhhhccccCCCcccccccceeeccccccCCCCCHHHHhhchhcCCCCCCCC
Q 047252 17 VTCGQVDASLASCISYLTAGGSPSAVCCDGLKNLKTITPPTADRRAACDCVKAAAARYPNIKEDAASSLPTKCGVQMNIP 96 (105)
Q Consensus 17 ~~C~~~~~~l~~C~~yl~~~~~P~~~CC~~l~~l~~~a~t~~~~~~~C~Cl~~~~~~~~~in~~~a~~LP~~Cgv~~pf~ 96 (105)
++|+++...|.||++|++|++.|+++||+++|+|++.|+|+.|||..|+|+++.+..+++||.++|++||++||+++||+
T Consensus 1 i~C~~v~~~L~pCl~yv~~~~~Ps~~CC~~lk~l~~~a~t~~d~~~~ClC~k~~~~~~~~in~~~A~~LP~~Cgv~~p~~ 80 (91)
T 1siy_A 1 MTCGQVQGNLAQCIGFLQKGGVVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRGINPNNAEALPGKCGVNIPYK 80 (91)
T ss_dssp CCTTTTHHHHHHHHHHHTSCSCCCHHHHHHHHHHHTTTCSSHHHHHHHHHHHHHTTCCSSCCHHHHHHHHHHHTCCCSSC
T ss_pred CCHHHHHHhccCcHHHHhCCCCCcHHHHHHHHHHHhhhccCCCCCcCCcccCCcccccCCcCHHHHHHHHHHcCCCCCCC
Confidence 47999999999999999987779999999999999999999999999999987767776799999999999999999999
Q ss_pred CCCCccCCC
Q 047252 97 ISRSTNCAK 105 (105)
Q Consensus 97 i~~~~dC~~ 105 (105)
||+++||++
T Consensus 81 is~~~dC~~ 89 (91)
T 1siy_A 81 ISTSTNCNS 89 (91)
T ss_dssp SCTTSCSST
T ss_pred CCCCCCCcc
Confidence 999999986
No 6
>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A*
Probab=99.96 E-value=1.2e-31 Score=170.79 Aligned_cols=90 Identities=46% Similarity=0.950 Sum_probs=84.0
Q ss_pred CCCchhhhccccccHHHHcCCCCCChhhhhhhhhccccCCCcccccccceeeccccccCCCCCHHHHhhchhcCCCCCCC
Q 047252 16 AVTCGQVDASLASCISYLTAGGSPSAVCCDGLKNLKTITPPTADRRAACDCVKAAAARYPNIKEDAASSLPTKCGVQMNI 95 (105)
Q Consensus 16 ~~~C~~~~~~l~~C~~yl~~~~~P~~~CC~~l~~l~~~a~t~~~~~~~C~Cl~~~~~~~~~in~~~a~~LP~~Cgv~~pf 95 (105)
+++|+++...|.||++|++|+++|+++||+++|+|+++|+|+.|||..|+|++.....+++||.++|++||++||+++||
T Consensus 1 ~~~C~~v~~~L~pCl~y~~~~~~p~~~CC~~lk~l~~~a~t~~d~~~~ClC~~~~~~~~~~in~~~A~~LP~~Cgv~~p~ 80 (92)
T 2alg_A 1 MITCGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVSIPY 80 (92)
T ss_dssp CCCHHHHHHHHGGGHHHHHHCSCCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTTCCCSS
T ss_pred CCChHHHHHhccCcHHHHcCCCCCCHHHHHHHHHHHhhhcccCCCCcCCccccCcccccCccChHHHHHHHHHcCCCCCC
Confidence 36799999999999999998778999999999999999999999999999998777777689999999999999999999
Q ss_pred CCCCCccCCC
Q 047252 96 PISRSTNCAK 105 (105)
Q Consensus 96 ~i~~~~dC~~ 105 (105)
+||++|||++
T Consensus 81 ~is~~~dC~~ 90 (92)
T 2alg_A 81 KISASTNCAT 90 (92)
T ss_dssp CSSTTSCGGG
T ss_pred CCCCCCCCcc
Confidence 9999999985
No 7
>2rkn_A DIR1 protein, AT5G48485; LTP, defense signaling protein, signaling protein, lipid TRA; HET: LP3; 1.60A {Arabidopsis thaliana}
Probab=99.64 E-value=1.8e-17 Score=101.85 Aligned_cols=70 Identities=30% Similarity=0.603 Sum_probs=58.4
Q ss_pred CCCchhhhccccccHHHHcCC--CCCChhhhhhhhhccccCCCcccccccceeeccc---cccCCCCCHHHHhhchhcCC
Q 047252 16 AVTCGQVDASLASCISYLTAG--GSPSAVCCDGLKNLKTITPPTADRRAACDCVKAA---AARYPNIKEDAASSLPTKCG 90 (105)
Q Consensus 16 ~~~C~~~~~~l~~C~~yl~~~--~~P~~~CC~~l~~l~~~a~t~~~~~~~C~Cl~~~---~~~~~~in~~~a~~LP~~Cg 90 (105)
..+|+++...|.||++|++++ ..|+++||+++|+ .|+ .|+|.+.. ...+ +||.+++++||++||
T Consensus 2 ~~~C~~~~~~L~pC~~yv~~~~~~~Ps~~CC~~lk~--------~~~--~ClC~~~~~~~~~~~-gin~~~A~~LP~~Cg 70 (77)
T 2rkn_A 2 IDLCGMSQDELNECKPAVSKENPTSPSQPCCTALQH--------ADF--ACLCGYKNSPWLGSF-GVDPELASALPKQCG 70 (77)
T ss_dssp CCBTTBCHHHHHHHGGGGBSSSCCCCCHHHHHHHTT--------CCH--HHHHTTTTCHHHHHH-TBCHHHHHHHHHHTT
T ss_pred cchHHhHHHhHhhCHHHHcCCCCCCCCHHHHHHHHh--------cCc--CCcCcccCCcchhhc-CcCHHHHHHHHHHcC
Confidence 468999999999999999974 4788999999998 133 78887654 4455 699999999999999
Q ss_pred CCCCCC
Q 047252 91 VQMNIP 96 (105)
Q Consensus 91 v~~pf~ 96 (105)
+++||.
T Consensus 71 v~~p~~ 76 (77)
T 2rkn_A 71 LANAPT 76 (77)
T ss_dssp CSCCCC
T ss_pred CCCCCC
Confidence 998864
No 8
>1n89_A Lipid transfer protein; lipid transport; HET: PGM; NMR {Triticum turgidum subsp} SCOP: a.52.1.1 PDB: 1tuk_A*
Probab=99.54 E-value=4.7e-16 Score=93.32 Aligned_cols=58 Identities=31% Similarity=0.640 Sum_probs=48.1
Q ss_pred cccccHHHHcCCCCCChhhhhhhhhccccCCCccccccccee--eccccccCCCCCHHHHhhchhcCCCCCC
Q 047252 25 SLASCISYLTAGGSPSAVCCDGLKNLKTITPPTADRRAACDC--VKAAAARYPNIKEDAASSLPTKCGVQMN 94 (105)
Q Consensus 25 ~l~~C~~yl~~~~~P~~~CC~~l~~l~~~a~t~~~~~~~C~C--l~~~~~~~~~in~~~a~~LP~~Cgv~~p 94 (105)
.|.||++|+++++.||++||++||+ +..|+| +++.... .+||.++|++||++||+++|
T Consensus 6 ~L~pC~~~v~~~~~Ps~~CC~~lk~-----------~~~ClC~~~k~~~~~-~~in~~~A~~Lp~~Cgv~~P 65 (67)
T 1n89_A 6 QLAVCASAILSGAKPSGECCGNLRA-----------QQGCFCQYAKDPTYG-QYIRSPHARDTLTSCGLAVP 65 (67)
T ss_dssp TTHHHHHHHTTCCCCCHHHHHHHHH-----------HSSHHHHGGGCSTTH-HHHTCHHHHHHHHHHTSCCS
T ss_pred hcccCHHHHcCCCCCCHHHHHhhCC-----------CCCCCCccccCcccc-cccCHHHHHHHHHHcCCCCC
Confidence 7999999999888899999999997 247888 5543222 15999999999999999876
No 9
>1l6h_A LTP2, non-specific lipid transfer protein; NSLTP2, plant LTP, lipid transport; NMR {Oryza sativa} SCOP: a.52.1.1
Probab=99.52 E-value=8.5e-16 Score=92.71 Aligned_cols=63 Identities=24% Similarity=0.605 Sum_probs=50.5
Q ss_pred CchhhhccccccHHHHcCCCCCChhhhhhhhhccccCCCccccccccee--eccccccCCCCCHHHHhhchhcCCCCCC
Q 047252 18 TCGQVDASLASCISYLTAGGSPSAVCCDGLKNLKTITPPTADRRAACDC--VKAAAARYPNIKEDAASSLPTKCGVQMN 94 (105)
Q Consensus 18 ~C~~~~~~l~~C~~yl~~~~~P~~~CC~~l~~l~~~a~t~~~~~~~C~C--l~~~~~~~~~in~~~a~~LP~~Cgv~~p 94 (105)
.|+.. .|.||++|++++++||++||++||+. ..|+| +++.... .+||.++|++||++||+++|
T Consensus 2 ~C~~~--~L~pC~~~v~~~~~Ps~~CC~~lk~~-----------~~ClC~~~k~~~~~-~~in~~~A~~Lp~~Cgv~~P 66 (69)
T 1l6h_A 2 GCNAG--QLTVCTGAIAGGARPTAACCSSLRAQ-----------QGCFCQFAKDPRYG-RYVNSPNARKAVSSCGIALP 66 (69)
T ss_dssp CSTTT--THHHHHHHHTTCCSTTHHHHHHHHHH-----------HHHHHHHTTCSSHH-HHTTTTTGGGCCCCCSSCSC
T ss_pred CCChh--hcccCHHHHcCCCCCCHHHHHhhCCC-----------CCCCCccccCcccc-cccCHHHHHHHHHHcCCCCC
Confidence 35544 89999999998888999999999972 47888 5543322 25999999999999999876
No 10
>1hyp_A Hydrophobic protein from soybean; hydrophobic SEED protein; 1.80A {Glycine max} SCOP: a.52.1.1
Probab=91.86 E-value=0.047 Score=33.19 Aligned_cols=68 Identities=19% Similarity=0.451 Sum_probs=45.2
Q ss_pred cccccHHHHcCCCCCChhhhhhhhhccccCCCcccccccceeeccccccCCCCCHHHHhh-chhcCCCCCCCCCCCCccC
Q 047252 25 SLASCISYLTAGGSPSAVCCDGLKNLKTITPPTADRRAACDCVKAAAARYPNIKEDAASS-LPTKCGVQMNIPISRSTNC 103 (105)
Q Consensus 25 ~l~~C~~yl~~~~~P~~~CC~~l~~l~~~a~t~~~~~~~C~Cl~~~~~~~~~in~~~a~~-LP~~Cgv~~pf~i~~~~dC 103 (105)
.|.-|.+-+.|.-.|..+||.-++.|.+. .-+.|.|-.-...++ +|.+...+ |-..||...| +.|.|
T Consensus 10 kLgvCanvL~g~~~~~~~CC~Ll~GL~dl------eAAvCLCtaik~Lgi--lnlpv~L~llln~Cgk~~P----~gF~C 77 (80)
T 1hyp_A 10 DLSICLNILGGSLGTVDDCCALIGGLGDI------EAIVCLCIQLRALGI--LNLNRNLQLILNSCGRSYP----SNATC 77 (80)
T ss_dssp CCGGGGGGGGTCCTTHHHHHHHHHTSCHH------HHHHHHHHHHHHHTC--SCHHHHHHHHHHHTTCSSC----CCCCC
T ss_pred chhHHHHHhCcCCCCCCccchhhhCcchh------hhhhhhhhhccccce--eecChhHHHHHHHhCCcCc----CCCCC
Confidence 57889888864334567999999998753 235788852212222 46665555 5578999988 66766
Q ss_pred C
Q 047252 104 A 104 (105)
Q Consensus 104 ~ 104 (105)
.
T Consensus 78 ~ 78 (80)
T 1hyp_A 78 P 78 (80)
T ss_dssp S
T ss_pred C
Confidence 4
No 11
>3ob4_A Conglutin, maltose ABC transporter periplasmic protein, ARAH; alpha-amylase inhibitors (AAI), lipid transfer (LT) and SEED (SS) protein family; HET: MLR; 2.71A {Escherichia coli}
Probab=86.67 E-value=0.043 Score=42.43 Aligned_cols=54 Identities=17% Similarity=0.516 Sum_probs=30.7
Q ss_pred hhhhhhhhhccccCCCcccccccceeecccccc----C-C----CCCHHHHhhchhcCCCCCC--CCCCCC
Q 047252 41 AVCCDGLKNLKTITPPTADRRAACDCVKAAAAR----Y-P----NIKEDAASSLPTKCGVQMN--IPISRS 100 (105)
Q Consensus 41 ~~CC~~l~~l~~~a~t~~~~~~~C~Cl~~~~~~----~-~----~in~~~a~~LP~~Cgv~~p--f~i~~~ 100 (105)
.+||+.|+.+.. ..+|-|.-++..+.. . + ..=..+|..||..||+..| .+|++.
T Consensus 429 ~~cc~~l~~~~~------~~~c~c~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~p~~c~~~~~~~c~~~~~ 493 (500)
T 3ob4_A 429 ERCCNELNEFEN------NQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLRAPQRCDLDVE 493 (500)
T ss_dssp HHHHHHHGGGTT------CHHHHHHHHHHHHHHHHTTCCSSHHHHHHHHHHHTHHHHTTCCCCSCCCCC--
T ss_pred HHHHHHHHhCCc------ccccccHHHHHHHHHHHHHhhhHHHHHHHHHHHhhCchhcCCCCCccCCccCC
Confidence 589999998631 023444435433221 0 0 0113459999999999966 556553
No 12
>1hss_A 0.19 alpha-amylase inhibitor; cereal inhibitor, animal amylase; 2.06A {Triticum aestivum} SCOP: a.52.1.2
Probab=77.59 E-value=0.32 Score=31.79 Aligned_cols=61 Identities=21% Similarity=0.542 Sum_probs=37.4
Q ss_pred ccccccHHHHcC----CCCC---ChhhhhhhhhccccCCCccccccccee--eccccc----------------cCCC--
Q 047252 24 ASLASCISYLTA----GGSP---SAVCCDGLKNLKTITPPTADRRAACDC--VKAAAA----------------RYPN-- 76 (105)
Q Consensus 24 ~~l~~C~~yl~~----~~~P---~~~CC~~l~~l~~~a~t~~~~~~~C~C--l~~~~~----------------~~~~-- 76 (105)
..|..|..||.. ...| ...||+.|+.+.. -|+| |+..+. .+++
T Consensus 15 ~pL~~Cr~Yv~~~C~g~~~p~~~~~~CC~QL~~i~~----------~CRC~ALr~m~~~~~~~~g~~~g~~~~e~~pgCr 84 (124)
T 1hss_A 15 PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISE----------WCRCGALYSMLDSMYKEHGAQEGQAGTGAFPRCR 84 (124)
T ss_dssp SCCTTHHHHHHHHTTTCCCCHHHHHHHHHHHHTSCT----------TTHHHHHHHHHHHHHHHC---------CCSTTCC
T ss_pred CcchHHHHHHHHHccCCCCcHHHHHHHHHHHHhcCc----------ccchHHHHHHHHhhhhhhhhhccccchhhccCCc
Confidence 358889999962 2223 2479999998653 4555 432221 1110
Q ss_pred --CCHHHHhhchhcCCCCCC
Q 047252 77 --IKEDAASSLPTKCGVQMN 94 (105)
Q Consensus 77 --in~~~a~~LP~~Cgv~~p 94 (105)
.-...|..||..||+..+
T Consensus 85 re~~~~~A~~LP~~Cnl~~~ 104 (124)
T 1hss_A 85 REVVKLTAASITAVCRLPIV 104 (124)
T ss_dssp HHHHHHHHTTHHHHTTCCEE
T ss_pred HHHHHHHHHhchhhcCCCCC
Confidence 122368899999999765
No 13
>1s6d_A Albumin 8; all helix, folded LEAF, right-handed superhelix, disulphide rich, plant protein; NMR {Helianthus annuus} SCOP: a.52.1.3
Probab=63.69 E-value=2.1 Score=26.77 Aligned_cols=69 Identities=26% Similarity=0.422 Sum_probs=42.2
Q ss_pred CCCchhhh--cc-ccccHHHHcCC---C----------CCChhhhhhhhhccccCCCcccccccceeecccc-ccCCC--
Q 047252 16 AVTCGQVD--AS-LASCISYLTAG---G----------SPSAVCCDGLKNLKTITPPTADRRAACDCVKAAA-ARYPN-- 76 (105)
Q Consensus 16 ~~~C~~~~--~~-l~~C~~yl~~~---~----------~P~~~CC~~l~~l~~~a~t~~~~~~~C~Cl~~~~-~~~~~-- 76 (105)
.-.|-.-+ .. |.+|-.|+.-. . ..-..||+-++.+.. ++-|.-|+..+ ..+.+
T Consensus 8 ~q~C~qq~q~~q~L~~Cq~yv~qq~~~~~~~~~~~~~e~~~qqCC~qL~~~~~--------~CrC~al~~~~Q~q~~g~q 79 (103)
T 1s6d_A 8 ESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDE--------KCMCPAIMMMLNEPMWIRM 79 (103)
T ss_dssp SSSHHHHHHHTCSTTHHHHHHTTTTSSCCCCSSSCCCCCCSHHHHHHHHHSCG--------GGSSHHHHHHTTSTTCSST
T ss_pred CcccHHHHHhChhHHHHHHHHHHHhhccCCcccccccHHHHHHHHHHHHhcCc--------ccCcHHHHHHHHHHhcchh
Confidence 34475433 24 99999999731 1 123689999998643 34444455443 22221
Q ss_pred --CCHHHHhhchhcCCCC
Q 047252 77 --IKEDAASSLPTKCGVQ 92 (105)
Q Consensus 77 --in~~~a~~LP~~Cgv~ 92 (105)
-...+|..||..||+.
T Consensus 80 ~~~~~q~A~~LP~~C~i~ 97 (103)
T 1s6d_A 80 RDQVMSMAHNLPIECNLM 97 (103)
T ss_dssp HHHHHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHhcHHhcCCC
Confidence 1244688999999996
No 14
>2lvf_A 2S albumin; allergen, copper binding, hydrophobic interaction; NMR {Bertholletia excelsa}
Probab=44.96 E-value=11 Score=23.71 Aligned_cols=61 Identities=18% Similarity=0.567 Sum_probs=37.0
Q ss_pred cccccHHHHc----CCC---CCC-------hhhhhhhhhccccCCCcccccccceeeccccc----c---CCC--CC--H
Q 047252 25 SLASCISYLT----AGG---SPS-------AVCCDGLKNLKTITPPTADRRAACDCVKAAAA----R---YPN--IK--E 79 (105)
Q Consensus 25 ~l~~C~~yl~----~~~---~P~-------~~CC~~l~~l~~~a~t~~~~~~~C~Cl~~~~~----~---~~~--in--~ 79 (105)
.|..|-.||. ++. ... ..||+-|+.+.. ++.|.-|+..+. . +.+ +. .
T Consensus 17 ~L~~Cq~yv~qq~~~~~~~~~~~~~~~~~l~~CC~qL~qv~~--------~CrC~aL~~~v~~~~qq~~~~~~~~~~~~~ 88 (114)
T 2lvf_A 17 MLSHCRMYMRQQMEESTYQTMPRRGMEPHMSECCEQLEGMDE--------SCRCEGLRMMMRMMQQKEMQPRGEQMRRMM 88 (114)
T ss_dssp HHHHHHHHHHHHHHTTTTCSCCSSSCCHHHHHHHHHHHHSCH--------HHHHHHHHHHHHHHHHHHCCCCSHHHHHHH
T ss_pred hHHHHHHHHHHHHhccCCccccccchHHHHHHHHHHHHHCCc--------CccCHHHHHHHHHHHHHHhhhhhhHHHHHH
Confidence 5899999997 221 111 359999999753 344443543322 1 111 11 3
Q ss_pred HHHhhchhcCCCCC
Q 047252 80 DAASSLPTKCGVQM 93 (105)
Q Consensus 80 ~~a~~LP~~Cgv~~ 93 (105)
..|..||+.||+.-
T Consensus 89 q~A~~LP~~C~i~p 102 (114)
T 2lvf_A 89 RLAENIPSRCNLSP 102 (114)
T ss_dssp HHHHHHHHHHCCCC
T ss_pred HHHHhChHhcCCCc
Confidence 47899999999973
No 15
>1ag7_A Conotoxin GS; neurotoxin, MU-conotoxin, sodium channel blocker, cystine knot motif; HET: HYP CGU; NMR {Conus geographus} SCOP: g.3.6.1
Probab=33.18 E-value=6.6 Score=19.23 Aligned_cols=12 Identities=33% Similarity=0.761 Sum_probs=9.5
Q ss_pred CCChhhhhhhhh
Q 047252 38 SPSAVCCDGLKN 49 (105)
Q Consensus 38 ~P~~~CC~~l~~ 49 (105)
.=+++||.|++-
T Consensus 8 rcppqccmglrc 19 (34)
T 1ag7_A 8 RCPPQCCMGLRC 19 (34)
T ss_dssp CSSSCBCTTEEE
T ss_pred CCChhhceeeec
Confidence 456799999985
No 16
>2ds2_B Sweet protein mabinlin-2 chain B; plant protein, SEED storage protein; 1.70A {Capparis masaikai}
Probab=31.88 E-value=21 Score=20.62 Aligned_cols=44 Identities=27% Similarity=0.548 Sum_probs=27.9
Q ss_pred hhhhhhhhhccccCCCcccccccceeeccccc------c-CC----CCCHHHHhhchhcCCCC
Q 047252 41 AVCCDGLKNLKTITPPTADRRAACDCVKAAAA------R-YP----NIKEDAASSLPTKCGVQ 92 (105)
Q Consensus 41 ~~CC~~l~~l~~~a~t~~~~~~~C~Cl~~~~~------~-~~----~in~~~a~~LP~~Cgv~ 92 (105)
..||+-++.+.. ++-|.-++..+. . +. .=...+|..||..||+.
T Consensus 8 qqCC~eL~~~~~--------~CrC~aL~~~~~~~~qqgq~~~~qq~~~~~q~a~~LP~~C~l~ 62 (72)
T 2ds2_B 8 RQCCNQLRQVDR--------PCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIP 62 (72)
T ss_dssp HHHHHHHTTSCG--------GGHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHhcCc--------cccCHHHHHHHHHHHHhhhhhchHHHHHHHHHHHhhHHhcCCC
Confidence 489999998643 344444554431 1 11 11255788999999997
No 17
>1pnb_B Napin BNIB; napin IA and IB, albumin SEED protein, SEED storage protein; NMR {Brassica napus} SCOP: a.52.1.3
Probab=30.42 E-value=15 Score=21.36 Aligned_cols=48 Identities=23% Similarity=0.373 Sum_probs=29.4
Q ss_pred CChhhhhhhhhccccCCCcccccccceeeccccc------cCCC----CCHHHHhhchhcCCCCCC
Q 047252 39 PSAVCCDGLKNLKTITPPTADRRAACDCVKAAAA------RYPN----IKEDAASSLPTKCGVQMN 94 (105)
Q Consensus 39 P~~~CC~~l~~l~~~a~t~~~~~~~C~Cl~~~~~------~~~~----in~~~a~~LP~~Cgv~~p 94 (105)
.-..||+-++.+.. ++-|.-++..+. .+++ -...+|..||..||+..+
T Consensus 10 ~~qqCC~qL~~~~~--------~CrC~aL~~~~~~~~~qgq~~~~q~~~~~q~a~~LP~~Cnl~~~ 67 (75)
T 1pnb_B 10 LREQCCNELYQEDQ--------VCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQI 67 (75)
T ss_dssp CTHHHHHHHHTSCG--------GGSHHHHHHHHHHHHSGGGCSSCCHHHHHHHCCSCSCSSCCTTT
T ss_pred HHHHHHHHHHhCCc--------ccccHHHHHHHHHHHHHcccchHHHHHHHHHHHhhHHhcCCCCC
Confidence 44699999998643 344444554321 1221 124567889999999743
No 18
>1psy_A 2S albumin, RICC3; albumin SEED protein, SEED storage protein, plant protein; NMR {Ricinus communis} SCOP: a.52.1.3
Probab=28.58 E-value=27 Score=22.31 Aligned_cols=71 Identities=25% Similarity=0.543 Sum_probs=43.3
Q ss_pred Cchhhh--ccccccHHHHcCC---C--------CC-------C----hhhhhhhhhccccCCCcccccccceeeccccc-
Q 047252 18 TCGQVD--ASLASCISYLTAG---G--------SP-------S----AVCCDGLKNLKTITPPTADRRAACDCVKAAAA- 72 (105)
Q Consensus 18 ~C~~~~--~~l~~C~~yl~~~---~--------~P-------~----~~CC~~l~~l~~~a~t~~~~~~~C~Cl~~~~~- 72 (105)
.|-.-+ ..|.+|-.||.-. . .| . ..||+-|+.+. .++-|.-|+..+.
T Consensus 17 ~C~~e~qq~~L~~Cq~yv~qq~~~~~~~~~~~~~~~~e~~~qe~~~~qqCC~qL~~~~--------~~C~C~aL~~~v~~ 88 (125)
T 1psy_A 17 QCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQVR--------DECQCEAIKYIAED 88 (125)
T ss_dssp SHHHHHTTSTTSSHHHHHHSSSCCCCSCSCCCCSSCSSSCSSSCHHHHHHHHHHTTCC--------SSHHHHHHHHHHHH
T ss_pred ccHHHHHHhhHHHHHHHHHHHHhcccCcchhhhcchhhcccccHHHHHHHHHHHHhcC--------cccccHHHHHHHHH
Confidence 576533 4799999999731 1 12 1 48999999864 2444544654431
Q ss_pred -----cCCC--C--CHHHHhhchhcCCCCCCCC
Q 047252 73 -----RYPN--I--KEDAASSLPTKCGVQMNIP 96 (105)
Q Consensus 73 -----~~~~--i--n~~~a~~LP~~Cgv~~pf~ 96 (105)
.+.+ + -..+|..||..||+.-.|+
T Consensus 89 ~~qQgq~~gqq~~~~~q~A~~LP~~C~i~C~~~ 121 (125)
T 1psy_A 89 QIQQGQLHGEESERVAQRAGEIVSSCGVRCMRQ 121 (125)
T ss_dssp HHHHTTCCTTCSHHHHHHHHHHHHHHTCSTTTS
T ss_pred HHHHhhhhHHHHHHHHHHHHhhHHHcCCcCCCC
Confidence 1111 1 1456788999999944444
No 19
>1eyo_A Conotoxin TVIIA; cystine knot motif; HET: HYP; NMR {Synthetic} SCOP: g.3.6.1
Probab=26.89 E-value=11 Score=18.04 Aligned_cols=12 Identities=42% Similarity=0.783 Sum_probs=9.3
Q ss_pred CCChhhhhhhhh
Q 047252 38 SPSAVCCDGLKN 49 (105)
Q Consensus 38 ~P~~~CC~~l~~ 49 (105)
.=|+.||.|++-
T Consensus 8 rcpp~ccmgl~c 19 (30)
T 1eyo_A 8 RCPPVCCMGLMC 19 (30)
T ss_dssp SCSSSBCTTBCC
T ss_pred CCCchheeeeee
Confidence 456789999875
Done!