Your job contains 1 sequence.
>047253
MSDDAGQMLMVYDDPSDQRSLSLDDTSSTEESPDETRLSLESTNDVVPYIGQRFPTHDAA
YEYYSEFAKSCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPIKASNENKPQRNRKSS
RCGCQAYMRISKVTELGAPEWRVTGFANNHNHELLEPNQVRFLPAYRTISETDKSRILMF
AKTGISVQQMMRLMELEKCVEPGYLPFTEKDVRNLLQSIRKLDPEDESVDLLRMCRNIKE
KDPNFRYEYTLDSNNRLENIAWSYASSIQAYEIFGDAVVFDTTHRLTALDMPLGIWVGVN
NYGVPCFFGCTLLREENLRSFSWALKAFLAFMDGKAPQTILTDQNMCLKEAIAMEMPVTK
HALCIWMIVVKFPSWFNAVLGERYNEWKAEFYRLYNLESIEDFEMGWRDMVNSFGLHTNR
HIANLFALRMQWALPYLRSNFFAGMTTTGHSKAINAFIQRFLGAQTRLAHFVEQVAVAVD
FKDQAAEQQTMQQNLQNICLKTGAPMESHAASVLTPFAFSKLQEQLVLAAHYASFPFEDG
FLVRHHTKLEGGRKVYWAPQEGIISCSCHQFEFSGILCRHTLRVLSTGNCFQIPERYLPL
RWRKISTHSVKLLQSSPSDHAERIQFLQSMVSSLIAESVKSKERLDLATEQVSYLLSRIR
QQPVSTQGLRDISPLHRNL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 047253
(679 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2012828 - symbol:FRS11 "FAR1-related sequence ... 2993 5.1e-312 1
TAIR|locus:2182778 - symbol:FRS10 "FAR1-related sequence ... 1312 6.9e-134 1
TAIR|locus:2121060 - symbol:FRS5 "FAR1-related sequence 5... 761 1.7e-75 1
TAIR|locus:2129665 - symbol:FAR1 "FAR-RED IMPAIRED RESPON... 685 1.9e-67 1
TAIR|locus:2059304 - symbol:FRS3 "FAR1-related sequence 3... 552 5.6e-57 2
TAIR|locus:2014639 - symbol:FRS4 "FAR1-related sequence 4... 585 7.5e-57 1
TAIR|locus:2035144 - symbol:FRS6 "FAR1-related sequence 6... 472 1.7e-51 2
TAIR|locus:2090394 - symbol:FHY3 "far-red elongated hypoc... 528 3.0e-50 1
TAIR|locus:2082420 - symbol:FRS7 "FAR1-related sequence 7... 471 1.4e-48 2
TAIR|locus:2144930 - symbol:FRS12 "FAR1-related sequence ... 451 9.9e-46 2
TAIR|locus:2016259 - symbol:FRS8 "FAR1-related sequence 8... 479 8.4e-44 1
TAIR|locus:2062606 - symbol:FRS2 "FAR1-related sequence 2... 406 1.5e-42 2
TAIR|locus:2121003 - symbol:FRS9 "FAR1-related sequence 9... 427 1.2e-39 1
TAIR|locus:2097543 - symbol:AT3G59470 species:3702 "Arabi... 175 3.6e-11 1
TAIR|locus:2135738 - symbol:AT4G12850 "AT4G12850" species... 157 2.4e-10 1
TAIR|locus:2041041 - symbol:AT2G43280 species:3702 "Arabi... 147 1.7e-08 1
TAIR|locus:2079651 - symbol:AT3G07500 "AT3G07500" species... 150 1.7e-08 1
>TAIR|locus:2012828 [details] [associations]
symbol:FRS11 "FAR1-related sequence 11" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC005489 InterPro:IPR018289 Pfam:PF10551 HOGENOM:HOG000006468
ProtClustDB:CLSN2687754 EMBL:AF424595 EMBL:BT000486 IPI:IPI00517858
RefSeq:NP_563865.1 UniGene:At.26302 IntAct:Q9SY66 PaxDb:Q9SY66
PRIDE:Q9SY66 EnsemblPlants:AT1G10240.1 GeneID:837563
KEGG:ath:AT1G10240 TAIR:At1g10240 eggNOG:NOG258635
InParanoid:Q9SY66 OMA:IRRHRTE PhylomeDB:Q9SY66
Genevestigator:Q9SY66 Uniprot:Q9SY66
Length = 680
Score = 2993 (1058.6 bits), Expect = 5.1e-312, P = 5.1e-312
Identities = 549/679 (80%), Positives = 618/679 (91%)
Query: 1 MSDDAGQMLMVYDDPSDQRSLSLDDTSSTEESPDETRLSLESTNDVVPYIGQRFPTHDAA 60
MSDD GQML++YDDPSDQRSLSLDD SSTEESPD+ LSLE+ ++ +PY+GQ F THD A
Sbjct: 1 MSDDPGQMLLIYDDPSDQRSLSLDDASSTEESPDDNNLSLEAVHNAIPYLGQIFLTHDTA 60
Query: 61 YEYYSEFAKSCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPIKASNENKPQRNRKSS 120
YE+YS FAK CGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPIK +E KPQRNR+SS
Sbjct: 61 YEFYSTFAKRCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPIKTLSEGKPQRNRRSS 120
Query: 121 RCGCQAYMRISKVTELGAPEWRVTGFANNHNHELLEPNQVRFLPAYRTISETDKSRILMF 180
RCGCQAY+RISK+TELG+ EWRVTGFAN+HNHELLEPNQVRFLPAYR+IS+ DKSRILMF
Sbjct: 121 RCGCQAYLRISKLTELGSTEWRVTGFANHHNHELLEPNQVRFLPAYRSISDADKSRILMF 180
Query: 181 AKTGISVQQMMRLMELEKCVEPGYLPFTEKDVRNLLQSIRKLDPEDESVDLLRMCRNIKE 240
+KTGISVQQMMRL+ELEKCVEPG+LPFTEKDVRNLLQS +KLDPEDE++D LRMC++IKE
Sbjct: 181 SKTGISVQQMMRLLELEKCVEPGFLPFTEKDVRNLLQSFKKLDPEDENIDFLRMCQSIKE 240
Query: 241 KDPNFRYEYTLDSNNRLENIAWSYASSIQAYEIFGDAVVFDTTHRLTALDMPLGIWVGVN 300
KDPNF++E+TLD+N++LENIAWSYASSIQ+YE+FGDAVVFDTTHRL+A++MPLGIWVGVN
Sbjct: 241 KDPNFKFEFTLDANDKLENIAWSYASSIQSYELFGDAVVFDTTHRLSAVEMPLGIWVGVN 300
Query: 301 NYGVPCFFGCTLLREENLRSFSWALKAFLAFMDGKAPQTILTDQNMCLKEAIAMEMPVTK 360
NYGVPCFFGC LLR+ENLRS+SWAL+AF FM+GKAPQTILTD NMCLKEAIA EMP TK
Sbjct: 301 NYGVPCFFGCVLLRDENLRSWSWALQAFTGFMNGKAPQTILTDHNMCLKEAIAGEMPATK 360
Query: 361 HALCIWMIVVKFPSWFNAVLGERYNEWKAEFYRLYNLESIEDFEMGWRDMVNSFGLHTNR 420
HALCIWM+V KFPSWFNA LGERYN+WKAEFYRLY+LES+E+FE+GWRDMVNSFGLHTNR
Sbjct: 361 HALCIWMVVGKFPSWFNAGLGERYNDWKAEFYRLYHLESVEEFELGWRDMVNSFGLHTNR 420
Query: 421 HIANLFALRMQWALPYLRSNFFAGMTTTGHSKAINAFIQRFLGAQTRLAHFVEQVAVAVD 480
HI NL+A R W+LPYLRS+F AGMT TG SKAINAFIQRFL AQTRLAHFVEQVAV VD
Sbjct: 421 HINNLYASRSLWSLPYLRSHFLAGMTLTGRSKAINAFIQRFLSAQTRLAHFVEQVAVVVD 480
Query: 481 FKDQAAEQQTMQQNLQNICLKTGAPMESHAASVLTPFAFSKLQEQLVLAAHYASFPFEDG 540
FKDQA EQQTMQQNLQNI LKTGAPMESHAASVLTPFAFSKLQEQLVLAAHYASF ++G
Sbjct: 481 FKDQATEQQTMQQNLQNISLKTGAPMESHAASVLTPFAFSKLQEQLVLAAHYASFQMDEG 540
Query: 541 FLVRHHTKLEGGRKVYWAPQEGIISCSCHQFEFSGILCRHTLRVLSTGNCFQIPERYLPL 600
+LVRHHTKL+GGRKVYW PQEGIISCSC FEFSG LCRH LRVLSTGNCFQ+P+RYLPL
Sbjct: 541 YLVRHHTKLDGGRKVYWVPQEGIISCSCQLFEFSGFLCRHALRVLSTGNCFQVPDRYLPL 600
Query: 601 RWRKISTHSVKLLQSSPSDHAERIQFLQSMVSSLIAESVKSKERLDLATEQVSYLLSRIR 660
RWR+IST K +S+ DH ER+Q LQ++VS+L++ES KSKERLD+ATEQ S LLSRIR
Sbjct: 601 RWRRISTSFSKTFRSNAEDHGERVQLLQNLVSTLVSESAKSKERLDIATEQTSILLSRIR 660
Query: 661 QQPVSTQGLRDISP-LHRN 678
+QPVS+ +RDIS + RN
Sbjct: 661 EQPVSSLAIRDISSSVQRN 679
>TAIR|locus:2182778 [details] [associations]
symbol:FRS10 "FAR1-related sequence 10" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 EMBL:AF262043
InterPro:IPR018289 Pfam:PF10551 IPI:IPI00525509 RefSeq:NP_198205.2
UniGene:At.55070 PaxDb:Q9LKR4 EnsemblPlants:AT5G28530.1
GeneID:832948 KEGG:ath:AT5G28530 TAIR:At5g28530 eggNOG:NOG320567
HOGENOM:HOG000006468 OMA:DECAQAF PhylomeDB:Q9LKR4
ProtClustDB:CLSN2687754 Genevestigator:Q9LKR4 Uniprot:Q9LKR4
Length = 685
Score = 1312 (466.9 bits), Expect = 6.9e-134, P = 6.9e-134
Identities = 275/651 (42%), Positives = 398/651 (61%)
Query: 24 DDTSSTEESPDETRLSLESTNDVV--PYIGQRFPTHDAAYEYYSEFAKSCGFSIRRHRTE 81
+D S+ +S E+ + S D V PY+GQ F T D A+EYYS FA+ GFSIR+ R+
Sbjct: 29 EDESTITKSEIESTPTPTSQYDTVFTPYVGQIFTTDDEAFEYYSTFARKSGFSIRKARST 88
Query: 82 GKDGVGKGLTRRYFVCHRAG-NTPIKASNENKPQRNRKSSRCGCQAYMRISKVTELGAPE 140
+G + RR FVC+R+G N P K +N P R RKS RCGC + ++K G
Sbjct: 89 ESQNLG--VYRRDFVCYRSGFNQPRKKANVEHP-RERKSVRCGCDGKLYLTKEVVDGVSH 145
Query: 141 WRVTGFANNHNHELLEPNQVRFLPAYRTISETDKSRILMFAKTGISVQQMMRLMELEKCV 200
W V+ F+N HNHELLE +QVR LPAYR I ++D+ RIL+ +K G V ++++L+ELEK V
Sbjct: 146 WYVSQFSNVHNHELLEDDQVRLLPAYRKIQQSDQERILLLSKAGFPVNRIVKLLELEKGV 205
Query: 201 EPGYLPFTEKDVRNLLQ----SIRKLDP------EDESVDLLRMCRNIKEKDPNFRYEYT 250
G LPF EKDVRN ++ S+++ D E ++++LL C+ + E+D +F Y+ T
Sbjct: 206 VSGQLPFIEKDVRNFVRACKKSVQENDAFMTEKRESDTLELLECCKGLAERDMDFVYDCT 265
Query: 251 LDSNNRLENIAWSYASSIQAYEIFGDAVVFDTTHRLTALDMPLGIWVGVNNYGVPCFFGC 310
D N ++ENIAW+Y S++ Y +FGD VVFDT++R + LG++ G++N G GC
Sbjct: 266 SDENQKVENIAWAYGDSVRGYSLFGDVVVFDTSYRSVPYGLLLGVFFGIDNNGKAMLLGC 325
Query: 311 TLLREENLRSFSWALKAFLAFMDGKAPQTILTDQNMCLKEAIAMEMPVTKHALCIWMIVV 370
LL++E+ RSF+WAL+ F+ FM G+ PQTILTD + LK+AI EMP T H + + IV
Sbjct: 326 VLLQDESCRSFTWALQTFVRFMRGRHPQTILTDIDTGLKDAIGREMPNTNHVVFMSHIVS 385
Query: 371 KFPSWFNAVLGERYNEWKAEFYRLYNLESIEDFEMGWRDMVNSFGLHTNRHIANLFALRM 430
K SWF+ LG Y E++A F L ++++FE W +V FGL +RH A L++ R
Sbjct: 386 KLASWFSQTLGSHYEEFRAGFDMLCRAGNVDEFEQQWDLLVTRFGLVPDRHAALLYSCRA 445
Query: 431 QWALPYLRSNFFAGMTTTGHSKAINAFIQRFLGAQTRLAHFVEQVAVAVDFKDQAAEQQT 490
W +R +F A T+ + +I++F++R + T + +E+ A+ V A+Q
Sbjct: 446 SWLPCCIREHFVAQTMTSEFNLSIDSFLKRVVDGATCMQLLLEESALQVSAAASLAKQIL 505
Query: 491 MQQNLQNICLKTGAPMESHAASVLTPFAFSKLQEQLVLAAHYASFPFEDG-FLVRHHTKL 549
+ + LKT PME HA +LTP+AFS LQ ++VL+ YA +G F+V H+ K+
Sbjct: 506 PRFTYPS--LKTCMPMEDHARGILTPYAFSVLQNEMVLSVQYAVAEMANGPFIVHHYKKM 563
Query: 550 EGGRKVYWAPQEGIISCSCHQFEFSGILCRHTLRVLSTGNCFQIPERYLPLRWRKISTHS 609
EG V W P+ I CSC +FE SGILCRHTLRVL+ NCF IPE+Y LRWR+ S H
Sbjct: 564 EGECCVIWNPENEEIQCSCKEFEHSGILCRHTLRVLTVKNCFHIPEQYFLLRWRQESPHV 623
Query: 610 VKLLQSSPSDHAERIQFLQSMVSSLIAESVKSKERLDLATEQVSYLLSRIR 660
Q+ + Q S+ +L+ ES+ SK+RLD A +++S L+ R+R
Sbjct: 624 ATENQNGQGIGDDSAQTFHSLTETLLTESMISKDRLDYANQELSLLIDRVR 674
>TAIR|locus:2121060 [details] [associations]
symbol:FRS5 "FAR1-related sequence 5" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270 EMBL:AL035538
EMBL:AL161593 InterPro:IPR018289 Pfam:PF10551 HOGENOM:HOG000241939
EMBL:AY136457 IPI:IPI00529649 PIR:T05645 RefSeq:NP_195531.1
UniGene:At.31195 UniGene:At.48951 PRIDE:Q9SZL8
EnsemblPlants:AT4G38180.1 GeneID:829974 KEGG:ath:AT4G38180
TAIR:At4g38180 eggNOG:NOG236180 InParanoid:Q9SZL8 OMA:RNNRQKS
PhylomeDB:Q9SZL8 ProtClustDB:CLSN2685396 Genevestigator:Q9SZL8
Uniprot:Q9SZL8
Length = 788
Score = 761 (272.9 bits), Expect = 1.7e-75, P = 1.7e-75
Identities = 196/624 (31%), Positives = 314/624 (50%)
Query: 45 DVVPYIGQRFPTHDAAYEYYSEFAKSCGFSIR--RHRTEGKDGVGKGLTRRYFVCHRAG- 101
D+ PY G F + +AA +Y+ +A+ GFS R R +DG + +R FVC + G
Sbjct: 70 DLEPYDGLEFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGA---IIQRQFVCAKEGF 126
Query: 102 -NTPIKASNENKPQRNRKSSRCGCQAYMRISKVTELGAPEWRVTGFANNHNHELLEPNQV 160
N K + + + +R R +R GC+A + + K+ + G +W V+GF +HNHEL+ P+QV
Sbjct: 127 RNMNEKRTKDREIKRPRTITRVGCKASLSV-KMQDSG--KWLVSGFVKDHNHELVPPDQV 183
Query: 161 RFLPAYRTISETDKSRILMFAKTGISVQQMMRLMELEKCVEPGYLPFTEKDVRNLLQSIR 220
L ++R IS K+ I G+ +++M + +++ + FTE D RN +++ R
Sbjct: 184 HCLRSHRQISGPAKTLIDTLQAAGMGPRRIMSAL-IKEYGGISKVGFTEVDCRNYMRNNR 242
Query: 221 KLDPEDESVDLLRMCRNIKEKDPNFRYEYTLDSNNRLENIAWSYASSIQAYEIFGDAVVF 280
+ E E LL R + +PNF Y + + N+ W+ +I + FGD V F
Sbjct: 243 QKSIEGEIQLLLDYLRQMNADNPNFFYSVQGSEDQSVGNVFWADPKAIMDFTHFGDTVTF 302
Query: 281 DTTHRLTALDMPLGIWVGVNNYGVPCFFGCTLLREENLRSFSWALKAFLAFMDGKAPQTI 340
DTT+R +P + GVN++G P FGC + E SF W +LA M P +I
Sbjct: 303 DTTYRSNRYRLPFAPFTGVNHHGQPILFGCAFIINETEASFVWLFNTWLAAMSAHPPVSI 362
Query: 341 LTDQNMCLKEAIAMEMPVTKHALCIWMIVVKFPSWFNAVLGERYNEWKAEFYRLYNL-ES 399
TD + ++ AI P +H C W I+ K + V ++ ++++F++ NL ES
Sbjct: 363 TTDHDAVIRAAIMHVFPGARHRFCKWHILKKCQEKLSHVF-LKHPSFESDFHKCVNLTES 421
Query: 400 IEDFEMGWRDMVNSFGLHTNRHIANLFALRMQWALPYLRSNFFAGMTTTGHSKAINAFIQ 459
+EDFE W +++ + L + + +++ R QW YLR FFA M+ T S +IN++
Sbjct: 422 VEDFERCWFSLLDKYELRDHEWLQAIYSDRRQWVPVYLRDTFFADMSLTHRSDSINSYFD 481
Query: 460 RFLGAQTRLAHFVEQVAVAVDF---KDQAAEQQTMQQNLQNICLKTGAPMESHAASVLTP 516
++ A T L+ F + A++ K+ A+ TM N + LKT +PME A+ + T
Sbjct: 482 GYINASTNLSQFFKLYEKALESRLEKEVKADYDTM--NSPPV-LKTPSPMEKQASELYTR 538
Query: 517 FAFSKLQEQLVLAAHY-ASFPFEDGFLVRHHTKLEG-GRKVYWAP---QEGIISCSCHQF 571
F + QE+LV + AS +DG LV + G K ++ E +CSC F
Sbjct: 539 KLFMRFQEELVGTLTFMASKADDDGDLVTYQVAKYGEAHKAHFVKFNVLEMRANCSCQMF 598
Query: 572 EFSGILCRHTLRVLSTGNCFQIPERYLPLRWRKISTHSVKL----LQSSPS---DHAERI 624
EFSGI+CRH L V N +P Y+ RW + + SV L + + H R
Sbjct: 599 EFSGIICRHILAVFRVTNLLTLPPYYILKRWTRNAKSSVIFDDYNLHAYANYLESHTVRY 658
Query: 625 QFLQSMVSSLIAESVKSKERLDLA 648
L+ S+ + E+ KS D+A
Sbjct: 659 NTLRHKASNFVQEAGKSLYTCDVA 682
>TAIR|locus:2129665 [details] [associations]
symbol:FAR1 "FAR-RED IMPAIRED RESPONSE 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=IMP] [GO:0010017 "red or far-red
light signaling pathway" evidence=IMP] [GO:0010018 "far-red light
signaling pathway" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0010218 "response
to far red light" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA;IDA] [GO:0042753
"positive regulation of circadian rhythm" evidence=IMP] [GO:0000278
"mitotic cell cycle" evidence=RCA] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=RCA] [GO:0006396 "RNA
processing" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0010212
"response to ionizing radiation" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016579 "protein deubiquitination" evidence=RCA] [GO:0048522
"positive regulation of cellular process" evidence=RCA]
InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966
SMART:SM00575 INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634
GO:GO:0045893 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003700 EMBL:AL161540 EMBL:Z97337 GO:GO:0010018
GO:GO:0042753 PIR:F71414 PIR:T02124 EMBL:AF159587 IPI:IPI00546816
RefSeq:NP_567455.4 UniGene:At.11570 IntAct:Q9SWG3 STRING:Q9SWG3
PaxDb:Q9SWG3 PRIDE:Q9SWG3 EnsemblPlants:AT4G15090.1 GeneID:827173
KEGG:ath:AT4G15090 TAIR:At4g15090 eggNOG:NOG306101
HOGENOM:HOG000090708 InParanoid:Q9SWG3 OMA:LNLMEPP PhylomeDB:Q9SWG3
ProtClustDB:CLSN2716659 Genevestigator:Q9SWG3 InterPro:IPR018289
Pfam:PF10551 Uniprot:Q9SWG3
Length = 827
Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
Identities = 184/658 (27%), Positives = 312/658 (47%)
Query: 4 DAGQ--MLMVYDDPSDQRSLSLDDTSSTEESPDETRLSLESTNDVVPYIGQRFPTHDAAY 61
DAG M+ + +P R + + D + D + D+ P G F TH+AAY
Sbjct: 10 DAGDDHMVDIVVEPHSNRDIGIVDEFNI--GGD---VGFSGDLDLEPRNGIDFDTHEAAY 64
Query: 62 EYYSEFAKSCGF--SIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPIKASNENKPQRNRKS 119
+Y E+AKS GF SI+ R K K F C R G TP S+ + +R+
Sbjct: 65 IFYQEYAKSMGFTTSIKNSRRSKKT---KDFIDAKFACSRYGVTPESESSGSSSRRSTVK 121
Query: 120 SRCGCQAYMRISKVTELGAPEWRVTGFANNHNHELLEPNQVRFLPAYRTISETDKSRILM 179
+ C+A M + + + G +W + F +HNHELL P R + +K+ I +
Sbjct: 122 -KTDCKASMHVKRRPD-G--KWIIHEFVKDHNHELL-PALAYHFRIQRNVKLAEKNNIDI 176
Query: 180 FAKTGISVQQMMRLMELEKCVEPGYLPFTEKDVRNLLQSIRKLDPED-ESVDLLRMCRNI 238
++M M + + DV + + R L E+ +S LL + I
Sbjct: 177 LHAVSERTKKMYVEMSRQSGGYKNIGSLLQTDVSSQVDKGRYLALEEGDSQVLLEYFKRI 236
Query: 239 KEKDPNFRYEYTLDSNNRLENIAWSYASSIQAYEIFGDAVVFDTTHRLTALDMPLGIWVG 298
K+++P F Y L+ + RL N+ W+ A S Y F D V FDTT+ +PL +++G
Sbjct: 237 KKENPKFFYAIDLNEDQRLRNLFWADAKSRDDYLSFNDVVSFDTTYVKFNDKLPLALFIG 296
Query: 299 VNNYGVPCFFGCTLLREENLRSFSWALKAFLAFMDGKAPQTILTDQNMCLKEAIAMEMPV 358
VN++ P GC L+ +E++ +F W +K +L M G+AP+ ILTDQ+ L A++ +P
Sbjct: 297 VNHHSQPMLLGCALVADESMETFVWLIKTWLRAMGGRAPKVILTDQDKFLMSAVSELLPN 356
Query: 359 TKHALCIWMIVVKFPSWFNAVLGERYNEWKAEFYR-LYNLESIEDFEMGWRDMVNSFGLH 417
T+H +W ++ K P +F+ V+ +R+ + +F + ++ + ++F+M W MV+ FGL
Sbjct: 357 TRHCFALWHVLEKIPEYFSHVM-KRHENFLLKFNKCIFRSWTDDEFDMRWWKMVSQFGLE 415
Query: 418 TNRHIANLFALRMQWALPYLRSNFFAGMTTTGHSKAINAFIQRFLGAQTRLAHFVEQVAV 477
+ + L R +W ++ F AGM+T+ S+++N+F +++ + L F+ Q V
Sbjct: 416 NDEWLLWLHEHRQKWVPTFMSDVFLAGMSTSQRSESVNSFFDKYIHKKITLKEFLRQYGV 475
Query: 478 AVDFKDQAAEQQTMQQNLQNICLKTGAPMESHAASVLTPFAFSKLQEQL--VLAAHYASF 535
+ + + + LK+ +P E A+ T F K Q ++ V+A H
Sbjct: 476 ILQNRYEEESVADFDTCHKQPALKSPSPWEKQMATTYTHTIFKKFQVEVLGVVACHPRKE 535
Query: 536 PFEDG---FLVRHHTKLEGGRKVYWAPQEGIISCSCHQFEFSGILCRHTLRVLSTGNCFQ 592
++ F V+ K + V W+ + + C C FE+ G LCRH L +L
Sbjct: 536 KEDENMATFRVQDCEK-DDDFLVTWSKTKSELCCFCRMFEYKGFLCRHALMILQMCGFAS 594
Query: 593 IPERYLPLRWRKISTHSVKLLQSSPS--DHAERIQFLQSMVSSLIAESVKSKERLDLA 648
IP +Y+ RW K + V + + +R L S + L E S+E ++A
Sbjct: 595 IPPQYILKRWTKDAKSGVLAGEGADQIQTRVQRYNDLCSRATELSEEGCVSEENYNIA 652
>TAIR|locus:2059304 [details] [associations]
symbol:FRS3 "FAR1-related sequence 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0016558 "protein import into peroxisome matrix" evidence=RCA]
InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966
SMART:SM00575 INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0009506
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0008270 EMBL:AC005623 InterPro:IPR018289 Pfam:PF10551
EMBL:AY057491 EMBL:BT002690 IPI:IPI00526037 IPI:IPI00657216
PIR:H84668 RefSeq:NP_001031428.1 RefSeq:NP_565636.1
RefSeq:NP_850098.1 UniGene:At.22269 IntAct:Q9ZVC9 PaxDb:Q9ZVC9
PRIDE:Q9ZVC9 EnsemblPlants:AT2G27110.1 EnsemblPlants:AT2G27110.2
GeneID:817253 KEGG:ath:AT2G27110 TAIR:At2g27110 eggNOG:NOG302035
HOGENOM:HOG000241939 InParanoid:Q9ZVC9 OMA:LWPRQDE PhylomeDB:Q9ZVC9
ProtClustDB:CLSN2688464 Genevestigator:Q9ZVC9 Uniprot:Q9ZVC9
Length = 851
Score = 552 (199.4 bits), Expect = 5.6e-57, Sum P(2) = 5.6e-57
Identities = 160/565 (28%), Positives = 260/565 (46%)
Query: 108 SNENKPQRNRKSSRCGCQAYMRISKVTEL-GAPEWRVTGFANNHNHELLEPNQVRFLPAY 166
S+ +K + R S C A +RI EL G +W VT F H H L N + L
Sbjct: 94 SSSSKRSKRRLSE--SCDAMVRI----ELQGHEKWVVTKFVKEHTHGLASSNMLHCLRPR 147
Query: 167 RTISETDKSRILMFAKTGISVQQMMRLMELEKCVEPGYLPFTEKDVRNLLQSIR-KLDPE 225
R + ++KS + G++V M + ++ + RN + K
Sbjct: 148 RHFANSEKSSY----QEGVNVPSGMMYVSMDA---------NSRGARNASMATNTKRTIG 194
Query: 226 DESVDLLRMCRNIKEKDPNFRYEYTLDSNNRLENIAWSYASSIQAYEIFGDAVVFDTTHR 285
++ +LL + ++ ++P F Y LD +N++ N+ W+ + S AY FGD V DT +R
Sbjct: 195 RDAHNLLEYFKRMQAENPGFFYAVQLDEDNQMSNVFWADSRSRVAYTHFGDTVTLDTRYR 254
Query: 286 LTALDMPLGIWVGVNNYGVPCFFGCTLLREENLRSFSWALKAFLAFMDGKAPQTILTDQN 345
+P + GVN++G FGC L+ +E+ SF W K FL M + P +++TDQ+
Sbjct: 255 CNQFRVPFAPFTGVNHHGQAILFGCALILDESDTSFIWLFKTFLTAMRDQPPVSLVTDQD 314
Query: 346 MCLKEAIAMEMPVTKHALCIWMIVVKFPSWFNAVLGERYNEWKAEFYRLYNL-ESIEDFE 404
++ A P +H + W ++ + V Y ++ E Y N E+IE+FE
Sbjct: 315 RAIQIAAGQVFPGARHCINKWDVLREGQEKLAHVC-LAYPSFQVELYNCINFTETIEEFE 373
Query: 405 MGWRDMVNSFGLHTNRHIANLFALRMQWALPYLRSNFFAGM-TTTGHSKAINAFIQRFLG 463
W +++ + L + + +L+ R QW Y R +FFA + + G+S +F ++
Sbjct: 374 SSWSSVIDKYDLGRHEWLNSLYNARAQWVPVYFRDSFFAAVFPSQGYS---GSFFDGYVN 430
Query: 464 AQTRLAHFVEQVAVAVD-FKDQAAEQQTMQQNLQNICLKTGAPMESHAASVLTPFAFSKL 522
QT L F A++ + + E N + LKT +PME+ AA++ T F K
Sbjct: 431 QQTTLPMFFRLYERAMESWFEMEIEADLDTVNTPPV-LKTPSPMENQAANLFTRKIFGKF 489
Query: 523 QEQLVLA-AHYASFPFEDGFLVRHHT-KLEGGRKVY---WAPQEGIISCSCHQFEFSGIL 577
QE+LV AH A+ +DG E K Y + E +CSC FE SGIL
Sbjct: 490 QEELVETFAHTANRIEDDGTTSTFRVANFENDNKAYIVTFCYPEMRANCSCQMFEHSGIL 549
Query: 578 CRHTLRVLSTGNCFQIPERYLPLRWRKISTHSVKLLQS-SPSDHAERIQFLQSMVSSLIA 636
CRH L V + N +P Y+ RW + + V+L + S + H I + L
Sbjct: 550 CRHVLTVFTVTNILTLPPHYILRRWTRNAKSMVELDEHVSENGHDSSIH----RYNHLCR 605
Query: 637 ESVKSKERLDLATEQVSYLLSRIRQ 661
E++K E + E + L ++R+
Sbjct: 606 EAIKYAEEGAITAEAYNIALGQLRE 630
Score = 61 (26.5 bits), Expect = 5.6e-57, Sum P(2) = 5.6e-57
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 48 PYIGQRFPTHDAAYEYYSEFAKSCGFSIRR-HRTEGKDGVGKGLTRRYFVC 97
P +G F + A +Y E+++ GF+ + RT+G V R FVC
Sbjct: 49 PCVGMEFNSEKEAKSFYDEYSRQLGFTSKLLPRTDGSVSV------REFVC 93
>TAIR|locus:2014639 [details] [associations]
symbol:FRS4 "FAR1-related sequence 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC009978 EMBL:AC012394 HOGENOM:HOG000090708 InterPro:IPR018289
Pfam:PF10551 EMBL:BT010456 EMBL:AK221406 IPI:IPI00535818
IPI:IPI00657192 PIR:G96790 RefSeq:NP_001031286.1 RefSeq:NP_177759.1
UniGene:At.34672 PaxDb:Q6NQJ7 PRIDE:Q6NQJ7 GeneID:843965
KEGG:ath:AT1G76320 TAIR:At1g76320 eggNOG:NOG261993
InParanoid:Q9SGQ3 OMA:KIGCKAS ProtClustDB:CLSN2682748
Genevestigator:Q6NQJ7 Uniprot:Q6NQJ7
Length = 732
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 165/608 (27%), Positives = 292/608 (48%)
Query: 54 FPTHDAAYEYYSEFAKSCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPIKASNENKP 113
F TH+ AY +Y ++AKS GF + + + K F C R G+ ++ + P
Sbjct: 3 FETHEDAYLFYKDYAKSVGFGTAKLSSR-RSRASKEFIDAKFSCIRYGSKQ-QSDDAINP 60
Query: 114 QRNRKSSRCGCQAYMRISKVTELGAPEWRVTGFANNHNHELLEPNQVRFLPAYRT--ISE 171
R S + GC+A M + + + G +W V F HNH+LL P Q + ++R + +
Sbjct: 61 ---RASPKIGCKASMHVKRRPD-G--KWYVYSFVKEHNHDLL-PEQAHYFRSHRNTELVK 113
Query: 172 TDKSRILMFAKTGIS-VQQMMRLMELEKCVEPGYLPFTEKDVRNLLQSIRKLDPEDESVD 230
++ SR+ T ++ + + +L+ ++ GY+ R L+ LD D +
Sbjct: 114 SNDSRLRRKKNTPLTDCKHLSAYHDLD-FID-GYMRNQHDKGRRLV-----LDTGDAEI- 165
Query: 231 LLRMCRNIKEKDPNFRYEYTLDSNNRLENIAWSYASSIQAYEIFGDAVVFDTTHRLTALD 290
LL ++E++P F + ++ L N+ W A I+ Y+ F D V F+T++ ++
Sbjct: 166 LLEFLMRMQEENPKFFFAVDFSEDHLLRNVFWVDAKGIEDYKSFSDVVSFETSYFVSKYK 225
Query: 291 MPLGIWVGVNNYGVPCFFGCTLLREENLRSFSWALKAFLAFMDGKAPQTILTDQNMCLKE 350
+PL ++VGVN++ P GC LL ++ + ++ W ++++L M G+ P+ +LTDQN +K
Sbjct: 226 VPLVLFVGVNHHVQPVLLGCGLLADDTVYTYVWLMQSWLVAMGGQKPKVMLTDQNNAIKA 285
Query: 351 AIAMEMPVTKHALCIWMIVVKFPSWFNAVLGERYNE--WKAEFYRLYNLESIEDFEMGWR 408
AIA +P T+H C+W ++ + P N + + K F +Y S E+F+ W
Sbjct: 286 AIAAVLPETRHCYCLWHVLDQLPR--NLDYWSMWQDTFMKKLFKCIYRSWSEEEFDRRWL 343
Query: 409 DMVNSFGLHTNRHIANLFALRMQWALPYLRSNFFAGMTTTGHSKAINAFIQRFLGAQTRL 468
+++ F L + +L+ R WA ++R FAG++ S+++N+ R++ +T L
Sbjct: 344 KLIDKFHLRDVPWMRSLYEERKFWAPTFMRGITFAGLSMRCRSESVNSLFDRYVHPETSL 403
Query: 469 AHFVEQVAVAVD--FKDQA-AEQQTMQQNLQNICLKTGAPMESHAASVLTPFAFSKLQ-E 524
F+E + ++ ++++A A+ + + LK+ +P E V + F + Q E
Sbjct: 404 KEFLEGYGLMLEDRYEEEAKADFDAWHEAPE---LKSPSPFEKQMLLVYSHEIFRRFQLE 460
Query: 525 QLVLAAHYASFPFEDG--FLVRHHTKLEGGRKVYWAPQEGIISCSCHQFEFSGILCRHTL 582
L AA + + E+G + V+ E V W + I CSC FE+ G LCRH +
Sbjct: 461 VLGAAACHLTKESEEGTTYSVKDFDD-EQKYLVDWDEFKSDIYCSCRSFEYKGYLCRHAI 519
Query: 583 RVLSTGNCFQIPERYLPLRWRKIST--HSVKLLQSSPSDHAERIQFLQSMVSSLIAESVK 640
VL F IP Y+ RW + H + + R L L E
Sbjct: 520 VVLQMSGVFTIPINYVLQRWTNAARNRHQISRNLELVQSNIRRFNDLCRRAIILGEEGSL 579
Query: 641 SKERLDLA 648
S+E D+A
Sbjct: 580 SQESYDIA 587
>TAIR|locus:2035144 [details] [associations]
symbol:FRS6 "FAR1-related sequence 6" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC008016 InterPro:IPR018289 Pfam:PF10551 EMBL:AY080775
EMBL:AY133776 IPI:IPI00532825 PIR:G96565 RefSeq:NP_175661.1
UniGene:At.37583 PRIDE:Q9SSQ4 EnsemblPlants:AT1G52520.1
GeneID:841683 KEGG:ath:AT1G52520 TAIR:At1g52520 eggNOG:NOG287780
HOGENOM:HOG000112651 InParanoid:Q9SSQ4 OMA:LELMCCK PhylomeDB:Q9SSQ4
ProtClustDB:CLSN2679731 Genevestigator:Q9SSQ4 Uniprot:Q9SSQ4
Length = 703
Score = 472 (171.2 bits), Expect = 1.7e-51, Sum P(2) = 1.7e-51
Identities = 151/572 (26%), Positives = 259/572 (45%)
Query: 111 NKPQRNRKSSRCGCQAYMRISKVTELGAPEWRVTGFANNHNHELLEPNQVRFLPAYRTIS 170
N R RK +R GC A +R+ +V + WRV +HNH LL Y+++
Sbjct: 142 NDVNRVRKETRTGCPAMIRMRQVD---SKRWRVVEVTLDHNH-LLG------CKLYKSVK 191
Query: 171 ETDK--SRILMFAKTGISVQQMMRLMELEKCVEPGYLPFTEKDVRNLLQS--IRKLDPED 226
K S + AKT I + + +++ V P K +N S + L D
Sbjct: 192 RKRKCVSSPVSDAKT-IKLYRAC-VVDNGSNVNPNST--LNKKFQNSTGSPDLLNLKRGD 247
Query: 227 ESVDLLRMCRNIKEKDPNFRYEYTLDSNNRLENIAWSYASSIQAYEIFGDAVVFDTTHRL 286
+ CR ++ +PNF Y ++ +L N+ W+ A S + FGD + D+++
Sbjct: 248 SAAIYNYFCR-MQLTNPNFFYLMDVNDEGQLRNVFWADAFSKVSCSYFGDVIFIDSSYIS 306
Query: 287 TALDMPLGIWVGVNNYGVPCFFGCTLLREENLRSFSWALKAFLAFMDGKAPQTILTDQNM 346
++PL + GVN++G C L E + S+ W LK +L+ M ++PQTI+TD+
Sbjct: 307 GKFEIPLVTFTGVNHHGKTTLLSCGFLAGETMESYHWLLKVWLSVMK-RSPQTIVTDRCK 365
Query: 347 CLKEAIAMEMPVTKHALCIWMIVVKFPSWFNAVLGERYNEWKAEFYR-LYNLESIEDFEM 405
L+ AI+ P + + I+ K P + Y+ + F + +Y + +FE
Sbjct: 366 PLEAAISQVFPRSHQRFSLTHIMRKIPEKLGGL--HNYDAVRKAFTKAVYETLKVVEFEA 423
Query: 406 GWRDMVNSFGLHTNRHIANLFALRMQWALPYLRSNFFAGMTTTGHSKAINAFIQRFLGAQ 465
W MV++FG+ N + +L+ R +WA YL+ FFAG+ + + F +R++ Q
Sbjct: 424 AWGFMVHNFGVIENEWLRSLYEERAKWAPVYLKDTFFAGIAAAHPGETLKPFFERYVHKQ 483
Query: 466 TRLAHFVEQVAVAVDFKDQAAEQQTMQ-QNLQNICLKTGAPMESHAASVLTPFAFSKLQE 524
T L F+++ +A+ K + ++ Q L LKT E+ + + T F K Q
Sbjct: 484 TPLKEFLDKYELALQKKHREETLSDIESQTLNTAELKTKCSFETQLSRIYTRDMFKKFQI 543
Query: 525 QL--VLAAHYASFPFEDG----FLVRHHTKLEGGRK------VYWAPQEGIISCSCHQFE 572
++ + + + DG FLV+ + E R+ V + G + C C F
Sbjct: 544 EVEEMYSCFSTTQVHVDGPFVIFLVKERVRGESSRREIRDFEVLYNRSVGEVRCICSCFN 603
Query: 573 FSGILCRHTLRVLSTGNCFQIPERYLPLRWRKI--STHSVKLLQSSPSDHAERIQFLQSM 630
F G LCRH L VL+ +IP RY+ RWRK H + D +R+Q+ +
Sbjct: 604 FYGYLCRHALCVLNFNGVEEIPLRYILPRWRKDYKRLHFADNGLTGFVDGTDRVQWFDQL 663
Query: 631 VSS---LIAESVKSKERLDLATEQVSYLLSRI 659
+ ++ E S + +A + + L ++
Sbjct: 664 YKNSLQVVEEGAVSLDHYKVAMQVLQESLDKV 695
Score = 115 (45.5 bits), Expect = 1.7e-51, Sum P(2) = 1.7e-51
Identities = 34/107 (31%), Positives = 47/107 (43%)
Query: 48 PYIGQRFPTHDAAYEYYSEFAKSCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPIKA 107
P +G F ++D AY YY+ +A GF +R + K K C G I
Sbjct: 85 PAVGMEFESYDDAYNYYNCYASEVGFRVRVKNSWFKRR-SKEKYGAVLCCSSQGFKRI-- 141
Query: 108 SNENKPQRNRKSSRCGCQAYMRISKVTELGAPEWRVTGFANNHNHEL 154
N R RK +R GC A +R+ +V + WRV +HNH L
Sbjct: 142 ---NDVNRVRKETRTGCPAMIRMRQVD---SKRWRVVEVTLDHNHLL 182
>TAIR|locus:2090394 [details] [associations]
symbol:FHY3 "far-red elongated hypocotyls 3" species:3702
"Arabidopsis thaliana" [GO:0004553 "hydrolase activity, hydrolyzing
O-glycosyl compounds" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009585 "red, far-red light phototransduction" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=IMP] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0010017 "red or far-red light signaling pathway"
evidence=IMP] [GO:0010218 "response to far red light" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0042753 "positive regulation of circadian rhythm"
evidence=IMP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006487 "protein N-linked glycosylation"
evidence=RCA] [GO:0008284 "positive regulation of cell
proliferation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0009639 "response to red or far red light"
evidence=RCA] InterPro:IPR001000 InterPro:IPR006564
InterPro:IPR007527 PROSITE:PS50966 SMART:SM00575 INTERPRO:IPR004330
Pfam:PF03101 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0045893 GO:GO:0046872 GO:GO:0005975 GO:GO:0007623
GO:GO:0004553 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0010218 GO:GO:0009585 GO:GO:0042753 HOGENOM:HOG000090708
InterPro:IPR018289 Pfam:PF10551 EMBL:AP001306 IPI:IPI00519965
RefSeq:NP_001118673.1 RefSeq:NP_188856.2 UniGene:At.27725
STRING:Q9LIE5 PaxDb:Q9LIE5 PRIDE:Q9LIE5 EnsemblPlants:AT3G22170.1
EnsemblPlants:AT3G22170.2 GeneID:821781 KEGG:ath:AT3G22170
TAIR:At3g22170 eggNOG:NOG45392 InParanoid:Q9LIE5 OMA:ITHAERV
PhylomeDB:Q9LIE5 ProtClustDB:PLN03097 Genevestigator:Q9LIE5
Uniprot:Q9LIE5
Length = 839
Score = 528 (190.9 bits), Expect = 3.0e-50, P = 3.0e-50
Identities = 158/577 (27%), Positives = 269/577 (46%)
Query: 48 PYIGQRFPTHDAAYEYYSEFAKSCGFSI-----RRHRT-----EGKDGVGKGLTRRYFVC 97
P G F +H AY +Y E++++ GF+ RR +T + K + T+R +
Sbjct: 70 PLNGMEFESHGEAYSFYQEYSRAMGFNTAIQNSRRSKTTREFIDAKFACSRYGTKREY-- 127
Query: 98 HRAGNTPIKASNENKPQR---NRKSSRCGCQAYMRISKVTELGAPEWRVTGFANNHNHEL 154
++ N P ++ P+ R ++ C+A M + + + G +W + F HNHEL
Sbjct: 128 DKSFNRPRARQSKQDPENMAGRRTCAKTDCKASMHVKRRPD-G--KWVIHSFVREHNHEL 184
Query: 155 LEPNQVRFLPAYRTISETDKSRILMFAKTGISVQQMMRLMELEKCVEPGYLPFTEKDVRN 214
L PA + +SE + AK + ++ L K F EK R
Sbjct: 185 L--------PA-QAVSEQTRKIYAAMAKQFAEYKTVISLKSDSKS------SF-EKG-RT 227
Query: 215 LLQSIRKLDPEDESVDLLRMCRNIKEKDPNFRYEYTLDSNNRLENIAWSYASSIQAYEIF 274
L ++ D + LL ++ + NF Y L + R++N+ W A S Y F
Sbjct: 228 L-----SVETGDFKI-LLDFLSRMQSLNSNFFYAVDLGDDQRVKNVFWVDAKSRHNYGSF 281
Query: 275 GDAVVFDTTHRLTALDMPLGIWVGVNNYGVPCFFGCTLLREENLRSFSWALKAFLAFMDG 334
D V DTT+ MPL I+VGVN + GC L+ +E+ ++SW ++ +L + G
Sbjct: 282 CDVVSLDTTYVRNKYKMPLAIFVGVNQHYQYMVLGCALISDESAATYSWLMETWLRAIGG 341
Query: 335 KAPQTILTDQNMCLKEAIAMEMPVTKHALCIWMIVVKFPSWFNAVLGERYNEWKAEFYR- 393
+AP+ ++T+ ++ + + P T+H L +W +++K V+ ++++ + +F +
Sbjct: 342 QAPKVLITELDVVMNSIVPEIFPNTRHCLFLWHVLMKVSENLGQVV-KQHDNFMPKFEKC 400
Query: 394 LYNLESIEDFEMGWRDMVNSFGLHTNRHIANLFALRMQWALPYLRSNFFAGMTTTGHSKA 453
+Y EDF W + FGL ++ + +L+ R +WA Y+ AGM+T+ + +
Sbjct: 401 IYKSGKDEDFARKWYKNLARFGLKDDQWMISLYEDRKKWAPTYMTDVLLAGMSTSQRADS 460
Query: 454 INAFIQRFLGAQTRLAHFVEQV-AVAVDFKDQAAEQQTMQQNLQNICLKTGAPMESHAAS 512
INAF +++ +T + FV+ V D ++ A+ + N Q +K+ +P E +
Sbjct: 461 INAFFDKYMHKKTSVQEFVKVYDTVLQDRCEEEAKADSEMWNKQP-AMKSPSPFEKSVSE 519
Query: 513 VLTPFAFSKLQEQLVLAAHYASFPFE--DGFLVRHHTK-LEGGRK--VYWAPQEGIISCS 567
V TP F K Q + VL A S E D + E + V W + +SC
Sbjct: 520 VYTPAVFKKFQIE-VLGAIACSPREENRDATCSTFRVQDFENNQDFMVTWNQTKAEVSCI 578
Query: 568 CHQFEFSGILCRHTLRVLSTGNCFQIPERYLPLRWRK 604
C FE+ G LCRHTL VL + IP +Y+ RW K
Sbjct: 579 CRLFEYKGYLCRHTLNVLQCCHLSSIPSQYILKRWTK 615
>TAIR|locus:2082420 [details] [associations]
symbol:FRS7 "FAR1-related sequence 7" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC018907
InterPro:IPR018289 Pfam:PF10551 eggNOG:NOG292373
HOGENOM:HOG000112649 ProtClustDB:CLSN2686747 EMBL:AF360270
EMBL:AY150446 IPI:IPI00534625 RefSeq:NP_566278.1 UniGene:At.19021
UniGene:At.74222 PRIDE:Q9M8J3 EnsemblPlants:AT3G06250.1
GeneID:819799 KEGG:ath:AT3G06250 TAIR:At3g06250 InParanoid:Q9M8J3
OMA:RCGNEIE PhylomeDB:Q9M8J3 Genevestigator:Q9M8J3 Uniprot:Q9M8J3
Length = 764
Score = 471 (170.9 bits), Expect = 1.4e-48, Sum P(2) = 1.4e-48
Identities = 132/453 (29%), Positives = 218/453 (48%)
Query: 211 DVRNLLQSIRK--LDPEDESVDLLRMCRNIKEKDPNFRYEYTLDSNNRLENIAWSYASSI 268
D+ N + S R+ + E V LL ++ + +D F Y LDSN +I W+ + S
Sbjct: 308 DLSNHISSTRENTIGKEWYPV-LLDYFQSKQAEDMGFFYAIELDSNGSCMSIFWADSRSR 366
Query: 269 QAYEIFGDAVVFDTTHRLTALDMPLGIWVGVNNYGVPCFFGCTLLREENLRSFSWALKAF 328
A FGDAVVFDT++R +P ++G N++ P G L+ +E+ +FSW + +
Sbjct: 367 FACSQFGDAVVFDTSYRKGDYSVPFATFIGFNHHRQPVLLGGALVADESKEAFSWLFQTW 426
Query: 329 LAFMDGKAPQTILTDQNMCLKEAIAMEMPVTKHALCIWMIVVKFPSWFNAVLGERYNEWK 388
L M G+ P++++ DQ++ +++A+A P T H W I K N L NE+K
Sbjct: 427 LRAMSGRRPRSMVADQDLPIQQAVAQVFPGTHHRFSAWQIRSKERE--N--LRSFPNEFK 482
Query: 389 AEFYR-LYNLESIEDFEMGWRDMVNSFGLHTNRHIANLFALRMQWALPYLRSNFFAGMTT 447
E+ + LY ++ +F+ W +VN +GL N + ++ R +W YLR++FF G+
Sbjct: 483 YEYEKCLYQSQTTVEFDTMWSSLVNKYGLRDNMWLREIYEKREKWVPAYLRASFFGGIHV 542
Query: 448 TGHSKAINAFIQRFLGAQTRLAHFVEQVAVAVDFKDQAAEQQTMQQ-NLQNICLKTGAPM 506
G + F L + T L F+ + ++ + + ++ NLQ L+T P+
Sbjct: 543 DG---TFDPFYGTSLNSLTSLREFISRYEQGLEQRREEERKEDFNSYNLQPF-LQTKEPV 598
Query: 507 ESHAASVLTPFAFSKLQEQLVLAAHYASFP-FEDG----FLVRHHTKLEGGRKVYWAPQE 561
E + T F Q +L + +Y +E+G FLVR V ++
Sbjct: 599 EEQCRRLYTLTIFRIFQSELAQSYNYLGLKTYEEGAISRFLVRKCGNENEKHAVTFSASN 658
Query: 562 GIISCSCHQFEFSGILCRHTLRVLSTGNCFQIPERYLPLRWRKISTHS-VKLLQSSPSDH 620
SCSC FE+ G+LCRH L+V + + ++P RY+ RW K + V+ ++S +
Sbjct: 659 LNASCSCQMFEYEGLLCRHILKVFNLLDIRELPSRYILHRWTKNAEFGFVRDVESGVTSQ 718
Query: 621 ---AERIQFLQSMVSSLIAESVKSKERLDLATE 650
A I L+ S I S E+ LA E
Sbjct: 719 DLKALMIWSLREAASKYIEFGTSSLEKYKLAYE 751
Score = 94 (38.1 bits), Expect = 1.4e-48, Sum P(2) = 1.4e-48
Identities = 30/97 (30%), Positives = 46/97 (47%)
Query: 41 ESTNDVVPYIGQRFPTHDAAYEYYSEFAKSCGFSIR-----RHRTEGKDGVGKGLTRRYF 95
E + + PY+G F T + A +YY+ +A GF +R R RT+G ++ R F
Sbjct: 21 EGDSGLEPYVGLEFDTAEEARDYYNSYATRTGFKVRTGQLYRSRTDGT------VSSRRF 74
Query: 96 VCHRAGNTPIKASNENKPQRNRKSSRCGCQAYMRISK 132
VC + G Q N SR GC A++R+ +
Sbjct: 75 VCSKEGF-----------QLN---SRTGCPAFIRVQR 97
Score = 84 (34.6 bits), Expect = 1.6e-47, Sum P(2) = 1.6e-47
Identities = 26/85 (30%), Positives = 39/85 (45%)
Query: 48 PYIGQRFPTHDAAYEYYSEFAKSCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPIKA 107
PY G F + + A ++Y +A+ GF +R + + V +T R FVC + G
Sbjct: 190 PYAGLEFNSANEACQFYQAYAEVVGFRVRIGQLF-RSKVDGSITSRRFVCSKEGF----- 243
Query: 108 SNENKPQRNRKSSRCGCQAYMRISK 132
+ SR GC AYMRI +
Sbjct: 244 ---------QHPSRMGCGAYMRIKR 259
Score = 74 (31.1 bits), Expect = 1.8e-46, Sum P(2) = 1.8e-46
Identities = 18/40 (45%), Positives = 22/40 (55%)
Query: 120 SRCGCQAYMRISKVTELGAPEWRVTGFANNHNHELLEPNQ 159
SR GC AYMRI + G W V +HNH+L EP +
Sbjct: 247 SRMGCGAYMRIKRQDSGG---WIVDRLNKDHNHDL-EPGK 282
Score = 61 (26.5 bits), Expect = 4.2e-45, Sum P(2) = 4.2e-45
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 119 SSRCGCQAYMRISKVTELGAPEWRVTGFANNHNHEL 154
+SR GC A++R+ + + G +W + HNH+L
Sbjct: 84 NSRTGCPAFIRVQR-RDTG--KWVLDQIQKEHNHDL 116
>TAIR|locus:2144930 [details] [associations]
symbol:FRS12 "FAR1-related sequence 12" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC068655
InterPro:IPR018289 Pfam:PF10551 IPI:IPI00546450 RefSeq:NP_197397.1
UniGene:At.22319 UniGene:At.72702 PaxDb:Q3E7I5 PRIDE:Q3E7I5
EnsemblPlants:AT5G18960.1 GeneID:832014 KEGG:ath:AT5G18960
TAIR:At5g18960 eggNOG:NOG292373 HOGENOM:HOG000112649
InParanoid:Q3E7I5 OMA:GSANEAC PhylomeDB:Q3E7I5
ProtClustDB:CLSN2686747 Genevestigator:Q3E7I5 Uniprot:Q3E7I5
Length = 788
Score = 451 (163.8 bits), Expect = 9.9e-46, Sum P(2) = 9.9e-46
Identities = 124/432 (28%), Positives = 209/432 (48%)
Query: 231 LLRMCRNIKEKDPNFRYEYTLDSNN-RLENIAWSYASSIQAYEIFGDAVVFDTTHRLTAL 289
LL ++ + +D F Y LD NN +I W+ + + A FGD+VVFDT++R +
Sbjct: 352 LLDYFQSRQTEDMGFFYAVELDVNNGSCMSIFWADSRARFACSQFGDSVVFDTSYRKGSY 411
Query: 290 DMPLGIWVGVNNYGVPCFFGCTLLREENLRSFSWALKAFLAFMDGKAPQTILTDQNMCLK 349
+P +G N++ P GC ++ +E+ +F W + +L M G+ P++I+ DQ++ ++
Sbjct: 412 SVPFATIIGFNHHRQPVLLGCAMVADESKEAFLWLFQTWLRAMSGRRPRSIVADQDLPIQ 471
Query: 350 EAIAMEMPVTKHALCIWMIVVKFPSWFNAVLGERYNEWKAEFYR-LYNLESIEDFEMGWR 408
+A+ P H W I K N + +E+K E+ + +Y ++I +F+ W
Sbjct: 472 QALVQVFPGAHHRYSAWQIREKERE--NLIPFP--SEFKYEYEKCIYQTQTIVEFDSVWS 527
Query: 409 DMVNSFGLHTNRHIANLFALRMQWALPYLRSNFFAGMTTTGHSKAINAFIQRFLGAQTRL 468
++N +GL + + ++ R W YLR++FFAG+ G I F L A T L
Sbjct: 528 ALINKYGLRDDVWLREIYEQRENWVPAYLRASFFAGIPING---TIEPFFGASLDALTPL 584
Query: 469 AHFVEQVAVAVDFKDQAAEQQTMQQ-NLQNICLKTGAPMESHAASVLTPFAFSKLQEQLV 527
F+ + A++ + + ++ NLQ L+T P+E + T F Q +LV
Sbjct: 585 REFISRYEQALEQRREEERKEDFNSYNLQPF-LQTKEPVEEQCRRLYTLTVFRIFQNELV 643
Query: 528 LAAHYASFP-FEDG----FLVRHHTKLEGGRKVYWAPQEGIISCSCHQFEFSGILCRHTL 582
+ +Y +E+G FLVR V ++ SCSC FE G+LCRH L
Sbjct: 644 QSYNYLCLKTYEEGAISRFLVRKCGNESEKHAVTFSASNLNSSCSCQMFEHEGLLCRHIL 703
Query: 583 RVLSTGNCFQIPERYLPLRWRKISTHS-VKLLQS--SPSD-HAERIQFLQSMVSSLIAES 638
+V + + ++P RY+ RW K + V+ ++S S D A + L+ S I
Sbjct: 704 KVFNLLDIRELPSRYILHRWTKNAEFGFVRDMESGVSAQDLKALMVWSLREAASKYIEFG 763
Query: 639 VKSKERLDLATE 650
S E+ LA E
Sbjct: 764 TSSLEKYKLAYE 775
Score = 94 (38.1 bits), Expect = 9.9e-46, Sum P(2) = 9.9e-46
Identities = 31/97 (31%), Positives = 46/97 (47%)
Query: 41 ESTNDVVPYIGQRFPTHDAAYEYYSEFAKSCGFSIR-----RHRTEGKDGVGKGLTRRYF 95
E + V PY+G F T + A E+Y+ +A GF +R R RT+G ++ R F
Sbjct: 36 EGGSGVEPYVGLEFDTAEEAREFYNAYAARTGFKVRTGQLYRSRTDGT------VSSRRF 89
Query: 96 VCHRAGNTPIKASNENKPQRNRKSSRCGCQAYMRISK 132
VC + G Q N SR GC A++R+ +
Sbjct: 90 VCSKEGF-----------QLN---SRTGCTAFIRVQR 112
Score = 87 (35.7 bits), Expect = 5.4e-45, Sum P(2) = 5.4e-45
Identities = 27/85 (31%), Positives = 39/85 (45%)
Query: 48 PYIGQRFPTHDAAYEYYSEFAKSCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPIKA 107
PY G F + + A ++Y +A+ GF +R + + V +T R FVC R G
Sbjct: 211 PYAGLEFGSANEACQFYQAYAEVVGFRVRIGQLF-RSKVDGSITSRRFVCSREGF----- 264
Query: 108 SNENKPQRNRKSSRCGCQAYMRISK 132
+ SR GC AYMRI +
Sbjct: 265 ---------QHPSRMGCGAYMRIKR 280
Score = 74 (31.1 bits), Expect = 1.3e-43, Sum P(2) = 1.3e-43
Identities = 18/40 (45%), Positives = 22/40 (55%)
Query: 120 SRCGCQAYMRISKVTELGAPEWRVTGFANNHNHELLEPNQ 159
SR GC AYMRI + G W V +HNH+L EP +
Sbjct: 268 SRMGCGAYMRIKRQDSGG---WIVDRLNKDHNHDL-EPGK 303
Score = 64 (27.6 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 119 SSRCGCQAYMRISKVTELGAPEWRVTGFANNHNHEL 154
+SR GC A++R+ + + G +W + HNHEL
Sbjct: 99 NSRTGCTAFIRVQR-RDTG--KWVLDQIQKEHNHEL 131
>TAIR|locus:2016259 [details] [associations]
symbol:FRS8 "FAR1-related sequence 8" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0050665
"hydrogen peroxide biosynthetic process" evidence=RCA]
InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966
SMART:SM00575 INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC009322 EMBL:AC011717 InterPro:IPR018289 Pfam:PF10551
HOGENOM:HOG000112651 IPI:IPI00534750 PIR:E96831 RefSeq:NP_178118.2
UniGene:At.52575 PRIDE:Q9S793 EnsemblPlants:AT1G80010.1
GeneID:844341 KEGG:ath:AT1G80010 TAIR:At1g80010 eggNOG:NOG311954
InParanoid:Q9S793 OMA:FAIRVKS Genevestigator:Q9S793 Uniprot:Q9S793
Length = 725
Score = 479 (173.7 bits), Expect = 8.4e-44, P = 8.4e-44
Identities = 163/627 (25%), Positives = 272/627 (43%)
Query: 48 PYIGQRFPTHDAAYEYYSEFAKSCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPIKA 107
P G F ++D AY +Y+ +A+ GF+IR + K K C+ G +K
Sbjct: 95 PTPGMEFESYDDAYSFYNSYARELGFAIRVKSSWTKRN-SKEKRGAVLCCNCQGFKLLKD 153
Query: 108 SNENKPQRNRKSSRCGCQAYMRISKVTELGAPEWRVTGFANNHNHELLEPNQVRFLPAYR 167
++ RK +R GCQA +R+ + W+V +HNH +P + +++
Sbjct: 154 AHSR-----RKETRTGCQAMIRLRLIH---FDRWKVDQVKLDHNHSF-DPQRAHNSKSHK 204
Query: 168 TISETDKSRILMFAKTGISVQ----QMMRLMELEKCVEPGY-LPFTEKDVRNL--LQSIR 220
S + + VQ ++ R + L+ G L E +L QS R
Sbjct: 205 KSSSSASPATKTNPEPPPHVQVRTIKLYRTLALDTPPALGTSLSSGETSDLSLDHFQSSR 264
Query: 221 KLDPEDESVDLLRMCRNIKEKDPNFRYEYTLDSNNRLENIAWSYASSIQAYEIFGDAVVF 280
+L+ L I+ PNF Y L + L N+ W A + AY FGD ++F
Sbjct: 265 RLELRGGFRALQDFFFQIQLSSPNFLYLMDLADDGSLRNVFWIDARARAAYSHFGDVLLF 324
Query: 281 DTTHRLTALDMPLGIWVGVNNYGVPCFFGCTLLREENLRSFSWALKAFLAFMDGKAPQTI 340
DTT A ++PL +VG+N++G GC LL +++ ++ W +A+L M G+ PQ
Sbjct: 325 DTTCLSNAYELPLVAFVGINHHGDTILLGCGLLADQSFETYVWLFRAWLTCMLGRPPQIF 384
Query: 341 LTDQNMCLKEAIAMEMPVTKHALCIWMIVVKFPSWFNAVLGERYNEWKAEFYRL-YNLES 399
+T+Q ++ A++ P H L + ++ + V + + + R+ Y
Sbjct: 385 ITEQCKAMRTAVSEVFPRAHHRLSLTHVLHNICQ--SVVQLQDSDLFPMALNRVVYGCLK 442
Query: 400 IEDFEMGWRDMVNSFGLHTNRHIANLFALRMQWALPYLRSNFFAGMTTTGHSKAINAFI- 458
+E+FE W +M+ FG+ N I ++F R WA YL+ F AG T FI
Sbjct: 443 VEEFETAWEEMIIRFGMTNNETIRDMFQDRELWAPVYLKDTFLAGALTFPLGNVAAPFIF 502
Query: 459 QRFLGAQTRLAHFVEQVAVAVDFKDQAAEQQTMQQNLQNIC-LKTGAPMESHAASVLTPF 517
++ T L F+E +D K E ++L+ I LKT P ES A V T
Sbjct: 503 SGYVHENTSLREFLEGYESFLD-KKYTREALCDSESLKLIPKLKTTHPYESQMAKVFTME 561
Query: 518 AFSKLQEQL-VLAAHYA-----SFPFEDGFLV--RHHTKLEGGRKVYWAPQEGIISCSC- 568
F + Q+++ +++ + S ++V R K+ +Y + C C
Sbjct: 562 IFRRFQDEVSAMSSCFGVTQVHSNGSASSYVVKEREGDKVRDFEVIYETSAAAQVRCFCV 621
Query: 569 -HQFEFSGILCRHTLRVLSTGNCFQIPERYLPLRWRK-ISTHSVKLLQSSPSDHAERIQF 626
F F+G CRH L +LS ++P +Y+ RWRK + V S D Q+
Sbjct: 622 CGGFSFNGYQCRHVLLLLSHNGLQEVPPQYILQRWRKDVKRLYVAEFGSGRVDIMNPDQW 681
Query: 627 LQSM---VSSLIAESVKSKERLDLATE 650
+ + ++ + ++SKE A E
Sbjct: 682 YEHLHRRAMQVVEQGMRSKEHCRAAWE 708
>TAIR|locus:2062606 [details] [associations]
symbol:FRS2 "FAR1-related sequence 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC005700
HOGENOM:HOG000090708 InterPro:IPR018289 Pfam:PF10551 EMBL:AK228730
EMBL:AK221503 IPI:IPI00520357 IPI:IPI00530517 PIR:G84730
RefSeq:NP_001077991.1 RefSeq:NP_001118431.1 RefSeq:NP_180784.2
RefSeq:NP_973580.1 UniGene:At.13189 UniGene:At.67147
EnsemblPlants:AT2G32250.1 EnsemblPlants:AT2G32250.3 GeneID:817785
KEGG:ath:AT2G32250 TAIR:At2g32250 eggNOG:NOG304016
InParanoid:Q3EBQ3 OMA:CKHAILV PhylomeDB:Q3EBQ3
ProtClustDB:CLSN2681190 Genevestigator:Q3EBQ3 Uniprot:Q3EBQ3
Length = 807
Score = 406 (148.0 bits), Expect = 1.5e-42, Sum P(2) = 1.5e-42
Identities = 94/388 (24%), Positives = 178/388 (45%)
Query: 222 LDPEDESVDLLRMCRNIKEKDPNFRYEYTLDSNNRLENIAWSYASSIQAYEIFGDAVVFD 281
L+ ED + LL +++K P F Y DS+ R+ N+ W A + Y F D V+FD
Sbjct: 165 LEEEDLKL-LLEHFMEMQDKQPGFFYAVDFDSDKRVRNVFWLDAKAKHDYCSFSDVVLFD 223
Query: 282 TTHRLTALDMPLGIWVGVNNYGVPCFFGCTLLREENLRSFSWALKAFLAFMDGKAPQTIL 341
T + +P ++GV+++ GC L+ E + ++SW + +L + G+AP ++
Sbjct: 224 TFYVRNGYRIPFAPFIGVSHHRQYVLLGCALIGEVSESTYSWLFRTWLKAVGGQAPGVMI 283
Query: 342 TDQNMCLKEAIAMEMPVTKHALCIWMIVVKFPSWFNAVLGERYNEWKAEFYRLYNLESIE 401
TDQ+ L + + P +H C+W ++ K N + + ++ + + + E
Sbjct: 284 TDQDKLLSDIVVEVFPDVRHIFCLWSVLSKISEMLNPFVSQDDGFMESFGNCVASSWTDE 343
Query: 402 DFEMGWRDMVNSFGLHTNRHIANLFALRMQWALPYLRSNFFAGMTTTGHSKAINAFIQRF 461
FE W +M+ F L+ N + LF R +W Y AG++ S +I + ++
Sbjct: 344 HFERRWSNMIGKFELNENEWVQLLFRDRKKWVPHYFHGICLAGLSGPERSGSIASHFDKY 403
Query: 462 LGAQTRLAHFVEQVAVAVDFKDQAAEQQTMQQNLQNICLKTGAPMESHAASVLTPFAFSK 521
+ ++ F E + ++ + ++ + L++ E + + T AF K
Sbjct: 404 MNSEATFKDFFELYMKFLQYRCDVEAKDDLEYQSKQPTLRSSLAFEKQLSLIYTDAAFKK 463
Query: 522 LQEQL--VLAAHYASFPFEDGFLVRHHTK-LEGGRKVYWAPQEGIIS--CSCHQFEFSGI 576
Q ++ V++ EDG + E + + A ++ CSCH FE+ G
Sbjct: 464 FQAEVPGVVSCQLQK-EREDGTTAIFRIEDFEERQNFFVALNNELLDACCSCHLFEYQGF 522
Query: 577 LCRHTLRVLSTGNCFQIPERYLPLRWRK 604
LC+H + VL + + ++P +Y+ RW K
Sbjct: 523 LCKHAILVLQSADVSRVPSQYILKRWSK 550
Score = 117 (46.2 bits), Expect = 1.5e-42, Sum P(2) = 1.5e-42
Identities = 47/177 (26%), Positives = 83/177 (46%)
Query: 51 GQRFPTHDAAYEYYSEFAKSCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPIKASNE 110
G F + +AAY +Y E+A+S GF I + GK + + C R G KA+
Sbjct: 41 GMDFESKEAAYYFYREYARSVGFGITIKASRRSKRSGKFIDVK-IACSRFGTKREKATAI 99
Query: 111 NKPQRNRKSSRCGCQAYMRISKVTELGAPEWRVTGFANNHNHELLEPNQVRFLPAYRTIS 170
N P R + GC+A + + + + +W + F HNHE+ P+ Y ++
Sbjct: 100 N-P---RSCPKTGCKAGLHMKRKED---EKWVIYNFVKEHNHEIC-PDDF-----YVSVR 146
Query: 171 ETDKSRILMFAKTGISV---QQMMRLMELEKCVE-----PGY---LPF-TEKDVRNL 215
+K + K G+ + ++ ++L+ LE +E PG+ + F ++K VRN+
Sbjct: 147 GKNKPAGALAIKKGLQLALEEEDLKLL-LEHFMEMQDKQPGFFYAVDFDSDKRVRNV 202
Score = 38 (18.4 bits), Expect = 3.0e-34, Sum P(2) = 3.0e-34
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 222 LDPEDESVDLLRMCRNI 238
+D ED +DLL N+
Sbjct: 1 MDDEDVEIDLLTKSSNV 17
>TAIR|locus:2121003 [details] [associations]
symbol:FRS9 "FAR1-related sequence 9" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 EMBL:AL035538 EMBL:AL161593 InterPro:IPR018289
Pfam:PF10551 HOGENOM:HOG000241939 UniGene:At.31195 UniGene:At.48951
EMBL:BX827635 EMBL:AK229615 IPI:IPI00517549 PIR:T05644
RefSeq:NP_195530.2 PaxDb:Q9SZL7 PRIDE:Q9SZL7
EnsemblPlants:AT4G38170.1 GeneID:829973 KEGG:ath:AT4G38170
TAIR:At4g38170 eggNOG:NOG320990 InParanoid:Q9SZL7 OMA:RCEVYRA
Genevestigator:Q9SZL7 Uniprot:Q9SZL7
Length = 545
Score = 427 (155.4 bits), Expect = 1.2e-39, P = 1.2e-39
Identities = 106/372 (28%), Positives = 179/372 (48%)
Query: 241 KDPNFRYEYTLDSNNRLENIAWSYASSIQAYEIFGDAVVFDTTHRL-TALDMPLGIWVGV 299
++P F Y D N + W+ + Y FGD +VFDTT+R +P + G
Sbjct: 31 ENPGFLYAIEDDCGN----VFWADPTCRLNYTYFGDTLVFDTTYRRGKRYQVPFAAFTGF 86
Query: 300 NNYGVPCFFGCTLLREENLRSFSWALKAFLAFMDGKAPQTILTDQNMCLKEAIAMEMPVT 359
N++G P FGC L+ E+ SF+W + +L M P +I + + ++ A++ T
Sbjct: 87 NHHGQPVLFGCALILNESESSFAWLFQTWLQAMSAPPPPSITVEPDRLIQVAVSRVFSQT 146
Query: 360 KHALCIWMIVVKFPSWFNAVLGERYNEWKAEFYR-LYNLESIEDFEMGWRDMVNSFGLHT 418
+ +I + V + + +++EF + E+ +FE W +V + +
Sbjct: 147 RLRFSQPLIFEETEEKLAHVF-QAHPTFESEFINCVTETETAAEFEASWDSIVRRYYMED 205
Query: 419 NRHIANLFALRMQWALPYLRSNFFAGMTTTGHSKAINAFIQRFLGAQTRLAHFVEQVAVA 478
N + +++ R QW ++R F+ ++T S +N+F Q F+ A T + ++Q A
Sbjct: 206 NDWLQSIYNARQQWVRVFIRDTFYGELSTNEGSSILNSFFQGFVDASTTMQMLIKQYEKA 265
Query: 479 VD-FKDQAAEQQTMQQNLQNICLKTGAPMESHAASVLTPFAFSKLQEQLV-LAAHYASFP 536
+D ++++ + N + +KT +PME AAS+ T AF K QE+ V A A+
Sbjct: 266 IDSWREKELKADYEATNSTPV-MKTPSPMEKQAASLYTRAAFIKFQEEFVETLAIPANII 324
Query: 537 FEDG----FLVRHHTKLEGGRKVYWAPQEGIISCSCHQFEFSGILCRHTLRVLSTGNCFQ 592
+ G + V ++ G V + E +CSC FE+SGI+CRH L V S N
Sbjct: 325 SDSGTHTTYRVAKFGEVHKGHTVSFDSLEVKANCSCQMFEYSGIICRHILAVFSAKNVLA 384
Query: 593 IPERYLPLRWRK 604
+P RYL RW K
Sbjct: 385 LPSRYLLRRWTK 396
>TAIR|locus:2097543 [details] [associations]
symbol:AT3G59470 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009639 "response to red or
far red light" evidence=ISS] INTERPRO:IPR004330 Pfam:PF03101
EMBL:CP002686 EMBL:AY058089 EMBL:AY143081 IPI:IPI00519802
RefSeq:NP_001190136.1 RefSeq:NP_567085.1 UniGene:At.26657
IntAct:Q93Z68 PaxDb:Q93Z68 PRIDE:Q93Z68 EnsemblPlants:AT3G59470.1
EnsemblPlants:AT3G59470.2 GeneID:825116 KEGG:ath:AT3G59470
TAIR:At3g59470 eggNOG:NOG330011 InParanoid:Q93Z68 OMA:VENHNEM
PhylomeDB:Q93Z68 ProtClustDB:CLSN2689239 Genevestigator:Q93Z68
Uniprot:Q93Z68
Length = 251
Score = 175 (66.7 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 63/234 (26%), Positives = 103/234 (44%)
Query: 1 MSDDAGQMLMVYDDPSD----QRSLSLDDTSSTEESPDETRLSLESTNDVVPYIGQRFPT 56
M + +GQ ++ DD + + S D+ + P E+ D PY+GQ F +
Sbjct: 20 MGESSGQAMIEQDDDNHNELGENSGEQDEKVDLDSIPLAVADMTEAQGDE-PYVGQEFES 78
Query: 57 HDAAYEYYSEFAKSCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAG-NTPIKASNENKPQR 115
AA+ +Y+ +A GF IR + G + R+ VC++ G P S +K R
Sbjct: 79 EAAAHGFYNAYATKVGFVIRVSKLSRSRHDGSPIGRQ-LVCNKEGYRLP---SKRDKVIR 134
Query: 116 NRKSSRCGCQAYMRISKVTELGAPEWRVTGFANNHNHELLEPNQVRFLPAYRTI-SETDK 174
R +R GC+A + I K G +W +T F HNH L+ P +VR Y +E DK
Sbjct: 135 QRAETRVGCKAMILIRKENS-G--KWVITKFVKEHNHSLM-PGRVRRGCIYDQYPNEHDK 190
Query: 175 SRILMFAKTGISVQQMMRLMELEKCVEP--GYLPFTEKDVRNLLQSIRKLDPED 226
+ LM + LE E + K +++++ ++R L+ D
Sbjct: 191 IQELMQQLAAEKKRAATYKRHLEMLFEQIEQHNESLSKRIQHIVDNVRNLEQRD 244
>TAIR|locus:2135738 [details] [associations]
symbol:AT4G12850 "AT4G12850" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009639 "response to red or far red
light" evidence=ISS] INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002687
EMBL:AL049640 EMBL:AL161535 HOGENOM:HOG000090425 IPI:IPI00545761
PIR:T06643 RefSeq:NP_193021.1 UniGene:At.33440 DNASU:826897
EnsemblPlants:AT4G12850.1 GeneID:826897 KEGG:ath:AT4G12850
TAIR:At4g12850 InParanoid:Q9SU01 OMA:EEIECQD PhylomeDB:Q9SU01
ProtClustDB:CLSN2916026 ArrayExpress:Q9SU01 Genevestigator:Q9SU01
Uniprot:Q9SU01
Length = 183
Score = 157 (60.3 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 54/184 (29%), Positives = 89/184 (48%)
Query: 48 PYIGQRFPTHDAAYEYYSEFAKSCGFSIR--RHRTEGKDGVGKGLTRRYFVCHRAGNTPI 105
PY+G +F + + A ++Y E++K GF +R + R G DG + L RR C++ G P
Sbjct: 10 PYVGLKFESEEEAKDFYVEYSKRLGFVVRMMQRRRSGIDG--RTLARR-LGCNKQGFGP- 65
Query: 106 KASNENKPQRNRKSSRCGCQAYMRISKVTELGAPEWRVTGFANNHNHELLEPNQVRFLPA 165
N + + SSR GC+A + + K+ + G +W VT F HNH L +F+ +
Sbjct: 66 ---NNQRSSSSSSSSREGCKATILV-KMEKSG--KWVVTRFIKEHNHSL------QFIGS 113
Query: 166 YRTISETDKSRILMFAKTGISVQQMM------RLMELEKCVEPGYLPFTEKDVRNLLQSI 219
S DK R + I Q + RL+ VE Y VR++++++
Sbjct: 114 SSYDSFADKERKIKELTEEIECQDRLCDVYRDRLVSFIDNVEH-YTEELSLKVRDIVENV 172
Query: 220 RKLD 223
+KL+
Sbjct: 173 KKLE 176
>TAIR|locus:2041041 [details] [associations]
symbol:AT2G43280 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009639 "response to red or
far red light" evidence=ISS] [GO:0006301 "postreplication repair"
evidence=RCA] INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002685
EMBL:BT002891 EMBL:BT004409 IPI:IPI00532233 RefSeq:NP_181857.2
UniGene:At.36909 EnsemblPlants:AT2G43280.1 GeneID:818930
KEGG:ath:AT2G43280 TAIR:At2g43280 HOGENOM:HOG000090425
InParanoid:Q84J94 OMA:PREARHT PhylomeDB:Q84J94
ProtClustDB:CLSN2680222 Genevestigator:Q84J94 Uniprot:Q84J94
Length = 206
Score = 147 (56.8 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 43/148 (29%), Positives = 71/148 (47%)
Query: 30 EESPDETRLSLESTND--VVPYIGQRFPTHDAAYEYYSEFAKSCGFSIRRHRTEGKDGVG 87
E+ D T + +T+D + P G F + DAA +Y ++++ GF +R + G
Sbjct: 2 EDEDDPTTKNSNNTDDFAIEPREGIIFESEDAAKMFYDDYSRRLGFVMRVMSCRRSEKDG 61
Query: 88 KGLTRRYFVCHRAGNTPIKASNENKPQRNRKSSRCGCQAYMRISKVTELGAPEWRVTGFA 147
+ L RR F C++ G+ ++ R S+R GC+A + + K G +W +T F
Sbjct: 62 RILARR-FGCNKEGHCVSIRGKFGSVRKPRPSTREGCKAMIHV-KYDRSG--KWVITKFV 117
Query: 148 NNHNHELL-EPNQVRFLPAYRTISETDK 174
HNH L+ P + R T+ E DK
Sbjct: 118 KEHNHPLVVSPREAR-----HTLDEKDK 140
>TAIR|locus:2079651 [details] [associations]
symbol:AT3G07500 "AT3G07500" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009639 "response to red or far red
light" evidence=ISS] INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002686
GenomeReviews:BA000014_GR HOGENOM:HOG000090425 EMBL:BT004031
EMBL:BT005083 IPI:IPI00525865 RefSeq:NP_187406.2 UniGene:At.48631
UniGene:At.71201 IntAct:Q84JA7 PRIDE:Q84JA7
EnsemblPlants:AT3G07500.1 GeneID:819938 KEGG:ath:AT3G07500
TAIR:At3g07500 eggNOG:NOG320386 InParanoid:Q84JA7 OMA:ERRRCTA
PhylomeDB:Q84JA7 ProtClustDB:CLSN2690766 Genevestigator:Q84JA7
Uniprot:Q84JA7
Length = 217
Score = 150 (57.9 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 63/218 (28%), Positives = 100/218 (45%)
Query: 20 SLSLDDTSSTEESPDETRLSLESTNDVVPYIGQRFPTHDAAYEYYSEFAKSCGFSIR--R 77
SL +D E S ++ E++ V P+IG F + +AA +Y +A GF +R
Sbjct: 5 SLPEEDVEMMENSDVMKTVTDEASPMVEPFIGMEFESEEAAKSFYDNYATCMGFVMRVDA 64
Query: 78 HRTEGKDGVGKGLTRRYFVCHRAG--NTPIKASNENKPQRNRKSSRCGCQAYMRISKVTE 135
R +DG + R VC++ G + + S KP R +R GC+A + + K +
Sbjct: 65 FRRSMRDGT---VVWRRLVCNKEGFRRSRPRRSESRKP---RAITREGCKALI-VVKREK 117
Query: 136 LGAPEWRVTGFANNHNHELL--EPNQVRFLPAYRTISETD-KSRILM--FAK-----TGI 185
G W VT F HNH LL PN R +T E D K R L ++ T +
Sbjct: 118 SGT--WLVTKFEKEHNHPLLPLSPNVRRNFQLPQTPDEKDAKIRELSAELSRERRRCTAL 175
Query: 186 SVQQMMRLMELEKCVEPGYLPFTEKDVRNLLQSIRKLD 223
Q M L E+E+ +L ++ +++QS+R ++
Sbjct: 176 QQQLDMVLKEMEE--HSNHLTI---NINSVIQSVRDIE 208
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.134 0.408 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 679 679 0.00079 121 3 11 22 0.50 33
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 623 (66 KB)
Total size of DFA: 388 KB (2190 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 61.45u 0.20s 61.65t Elapsed: 00:00:03
Total cpu time: 61.45u 0.20s 61.65t Elapsed: 00:00:03
Start: Sat May 11 00:21:34 2013 End: Sat May 11 00:21:37 2013