Query 047254
Match_columns 836
No_of_seqs 370 out of 1253
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 16:07:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047254.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047254hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2bw3_A Transposase; DNA recomb 100.0 1.1E-60 3.6E-65 560.5 29.2 452 234-725 12-532 (534)
2 2djr_A Zinc finger BED domain- 97.5 5.3E-05 1.8E-09 63.1 3.5 43 64-106 4-57 (76)
3 2ct5_A Zinc finger BED domain 97.2 0.00024 8.2E-09 58.8 3.7 43 64-106 4-54 (73)
4 1vq8_Z 50S ribosomal protein L 64.4 1.8 6.2E-05 36.5 0.7 20 81-100 43-62 (83)
5 3sp4_A Aprataxin-like protein; 64.4 2.8 9.6E-05 41.5 2.2 25 81-105 167-191 (204)
6 3cc2_Z 50S ribosomal protein L 50.3 4.3 0.00015 36.1 0.7 21 81-101 76-96 (116)
7 2kvh_A Zinc finger and BTB dom 48.7 11 0.00039 22.8 2.4 22 83-105 3-24 (27)
8 2els_A Zinc finger protein 406 46.4 13 0.00045 24.4 2.6 23 82-105 8-30 (36)
9 3cw1_L U1 small nuclear ribonu 45.6 6.2 0.00021 32.6 0.9 27 83-109 3-30 (77)
10 2elt_A Zinc finger protein 406 38.6 20 0.00069 23.3 2.6 23 82-105 8-30 (36)
11 2kvg_A Zinc finger and BTB dom 38.6 16 0.00055 22.2 2.0 22 83-105 3-24 (27)
12 2kvf_A Zinc finger and BTB dom 38.5 25 0.00086 21.2 2.9 22 83-105 3-24 (28)
13 1srk_A Zinc finger protein ZFP 38.2 28 0.00096 22.4 3.3 24 82-106 6-29 (35)
14 2elq_A Zinc finger protein 406 37.9 21 0.00072 23.3 2.6 23 82-105 8-30 (36)
15 1ard_A Yeast transcription fac 36.1 20 0.00068 21.7 2.1 21 84-105 3-23 (29)
16 2m0d_A Zinc finger and BTB dom 35.5 30 0.001 20.9 3.0 23 83-106 3-25 (30)
17 2m0f_A Zinc finger and BTB dom 35.4 23 0.0008 21.3 2.4 22 83-105 2-23 (29)
18 1ffk_W Ribosomal protein L37AE 34.9 11 0.00036 30.9 0.7 20 82-101 44-63 (73)
19 1rim_A E6APC2 peptide; E6-bind 34.9 20 0.00067 23.2 2.0 22 84-106 3-24 (33)
20 2elx_A Zinc finger protein 406 33.8 32 0.0011 22.0 3.0 24 82-106 6-29 (35)
21 2elr_A Zinc finger protein 406 33.8 24 0.00081 22.9 2.3 23 82-105 8-30 (36)
22 1rik_A E6APC1 peptide; E6-bind 33.6 28 0.00094 21.1 2.5 22 83-105 2-23 (29)
23 1znf_A 31ST zinc finger from X 33.2 32 0.0011 20.4 2.7 21 84-105 2-22 (27)
24 1klr_A Zinc finger Y-chromosom 32.9 19 0.00066 21.9 1.6 21 84-105 3-23 (30)
25 1njq_A Superman protein; zinc- 31.0 40 0.0014 22.4 3.2 25 82-107 5-29 (39)
26 3jyw_9 60S ribosomal protein L 30.8 13 0.00044 30.3 0.5 19 81-99 42-60 (72)
27 2elp_A Zinc finger protein 406 30.4 29 0.001 22.7 2.3 23 82-105 8-31 (37)
28 2epu_A Zinc finger protein 32; 29.8 43 0.0015 23.1 3.3 25 82-107 11-35 (45)
29 1fv5_A First zinc finger of U- 29.6 29 0.00098 23.9 2.1 22 82-104 7-28 (36)
30 2m0e_A Zinc finger and BTB dom 29.6 22 0.00077 21.3 1.5 21 83-104 2-22 (29)
31 2elv_A Zinc finger protein 406 29.2 48 0.0016 21.4 3.3 23 82-105 8-30 (36)
32 2jrr_A Uncharacterized protein 29.2 20 0.00067 28.8 1.3 17 77-93 34-50 (67)
33 2enf_A Zinc finger protein 347 29.0 47 0.0016 23.0 3.4 27 82-109 11-37 (46)
34 2en2_A B-cell lymphoma 6 prote 28.8 34 0.0012 23.1 2.6 23 82-105 10-32 (42)
35 2emi_A Zinc finger protein 484 28.8 54 0.0019 22.6 3.7 27 82-109 11-37 (46)
36 2eq3_A Zinc finger protein 347 28.8 41 0.0014 23.3 3.0 27 82-109 11-37 (46)
37 2elo_A Zinc finger protein 406 28.7 29 0.001 22.6 2.1 23 82-105 8-30 (37)
38 3iz5_m 60S ribosomal protein L 28.6 16 0.00055 31.1 0.8 20 81-100 52-71 (92)
39 3j21_i 50S ribosomal protein L 28.5 16 0.00054 30.6 0.7 20 81-100 51-70 (83)
40 2elm_A Zinc finger protein 406 28.2 44 0.0015 22.0 3.0 23 82-105 8-31 (37)
41 2yrj_A Zinc finger protein 473 27.9 57 0.002 22.5 3.7 27 81-108 10-36 (46)
42 2yts_A Zinc finger protein 484 27.9 60 0.002 22.4 3.8 27 81-108 10-36 (46)
43 1p7a_A BF3, BKLF, kruppel-like 27.8 41 0.0014 21.9 2.8 23 82-105 10-32 (37)
44 2epv_A Zinc finger protein 268 27.8 38 0.0013 23.4 2.7 24 82-106 11-34 (44)
45 2eor_A Zinc finger protein 224 27.8 37 0.0013 23.6 2.6 25 81-106 10-34 (46)
46 2epp_A POZ-, at HOOK-, and zin 27.4 40 0.0014 26.7 2.9 28 82-110 12-39 (66)
47 2emf_A Zinc finger protein 484 27.4 65 0.0022 22.2 3.9 27 82-109 11-37 (46)
48 3izc_m 60S ribosomal protein R 27.1 17 0.0006 30.9 0.7 20 81-100 52-71 (92)
49 2eme_A Zinc finger protein 473 26.9 71 0.0024 21.9 4.1 27 82-109 11-37 (46)
50 2jvm_A Uncharacterized protein 26.9 26 0.00087 29.1 1.7 17 77-93 47-63 (80)
51 2ytp_A Zinc finger protein 484 26.7 63 0.0022 22.3 3.8 26 81-107 10-35 (46)
52 2ytf_A Zinc finger protein 268 26.7 60 0.0021 22.3 3.6 27 82-109 11-37 (46)
53 2eq0_A Zinc finger protein 347 26.7 61 0.0021 22.4 3.7 28 81-109 10-37 (46)
54 2el5_A Zinc finger protein 268 26.6 65 0.0022 21.6 3.7 27 82-109 9-35 (42)
55 3iuf_A Zinc finger protein UBI 26.5 40 0.0014 24.0 2.7 23 82-105 6-28 (48)
56 2emb_A Zinc finger protein 473 26.5 64 0.0022 22.0 3.7 26 82-108 11-36 (44)
57 2eod_A TNF receptor-associated 26.4 49 0.0017 25.2 3.3 32 81-115 8-40 (66)
58 2emg_A Zinc finger protein 484 26.2 56 0.0019 22.6 3.4 27 82-109 11-37 (46)
59 2eof_A Zinc finger protein 268 26.1 57 0.0019 22.2 3.4 24 82-106 11-34 (44)
60 2lvu_A Zinc finger and BTB dom 32.0 14 0.00049 22.0 0.0 21 83-104 2-22 (26)
61 2eml_A Zinc finger protein 28 25.9 76 0.0026 21.8 4.1 27 82-109 11-37 (46)
62 2ep1_A Zinc finger protein 484 25.9 52 0.0018 22.7 3.1 27 82-109 11-37 (46)
63 4a17_Y RPL37A, 60S ribosomal p 25.8 17 0.00057 31.6 0.4 21 81-101 52-72 (103)
64 2em6_A Zinc finger protein 224 25.7 58 0.002 22.5 3.4 26 82-108 11-36 (46)
65 2ep3_A Zinc finger protein 484 25.4 66 0.0023 22.2 3.6 27 82-109 11-37 (46)
66 2eoo_A ZFP-95, zinc finger pro 25.1 46 0.0016 23.1 2.7 23 82-105 11-33 (46)
67 2em5_A ZFP-95, zinc finger pro 25.0 78 0.0027 21.8 4.0 27 82-109 11-37 (46)
68 2em9_A Zinc finger protein 224 24.9 79 0.0027 21.7 4.0 27 82-109 11-37 (46)
69 2eom_A ZFP-95, zinc finger pro 24.9 38 0.0013 23.6 2.2 24 82-106 11-34 (46)
70 2eq1_A Zinc finger protein 347 24.8 56 0.0019 22.6 3.1 27 82-109 11-37 (46)
71 2ene_A Zinc finger protein 347 24.8 80 0.0027 21.7 4.0 28 81-109 10-37 (46)
72 2ytn_A Zinc finger protein 347 24.7 65 0.0022 22.2 3.5 28 81-109 10-37 (46)
73 2en7_A Zinc finger protein 268 24.6 56 0.0019 22.2 3.1 25 82-107 11-35 (44)
74 1pg5_B Aspartate carbamoyltran 24.6 33 0.0011 32.5 2.2 35 68-105 129-164 (168)
75 2ept_A Zinc finger protein 32; 24.5 77 0.0026 21.1 3.8 25 82-107 9-33 (41)
76 2yww_A Aspartate carbamoyltran 24.3 21 0.00072 33.2 0.8 20 78-97 128-147 (149)
77 2lvr_A Zinc finger and BTB dom 30.1 16 0.00055 22.4 0.0 22 83-105 3-24 (30)
78 2eoz_A Zinc finger protein 473 24.2 48 0.0016 23.0 2.7 24 82-106 11-34 (46)
79 2en8_A Zinc finger protein 224 24.0 83 0.0028 21.6 4.0 27 82-109 11-37 (46)
80 2eoy_A Zinc finger protein 473 23.9 44 0.0015 23.2 2.4 24 82-106 11-34 (46)
81 2en3_A ZFP-95, zinc finger pro 23.9 43 0.0015 23.2 2.4 23 82-105 11-33 (46)
82 2eop_A Zinc finger protein 268 23.9 71 0.0024 21.9 3.6 27 82-109 11-37 (46)
83 2eow_A Zinc finger protein 347 23.9 59 0.002 22.4 3.1 26 81-107 10-35 (46)
84 2el4_A Zinc finger protein 268 23.8 86 0.003 21.5 4.0 27 82-109 11-37 (46)
85 2eon_A ZFP-95, zinc finger pro 23.7 64 0.0022 22.4 3.3 25 82-107 11-35 (46)
86 1paa_A Yeast transcription fac 23.6 47 0.0016 20.1 2.3 20 84-104 3-22 (30)
87 2eoj_A Zinc finger protein 268 23.5 61 0.0021 22.0 3.1 26 82-108 11-36 (44)
88 2em4_A Zinc finger protein 28 23.5 60 0.0021 22.4 3.1 25 81-106 10-34 (46)
89 2ema_A Zinc finger protein 347 23.4 75 0.0026 21.9 3.6 28 81-109 10-37 (46)
90 2yti_A Zinc finger protein 347 23.4 55 0.0019 22.6 2.9 27 82-109 11-37 (46)
91 2eoh_A Zinc finger protein 28 23.3 61 0.0021 22.4 3.1 25 82-107 11-35 (46)
92 1va1_A Transcription factor SP 23.2 55 0.0019 21.5 2.7 24 81-105 6-31 (37)
93 2epz_A Zinc finger protein 28 23.2 66 0.0022 22.2 3.2 27 82-109 11-37 (46)
94 2em3_A Zinc finger protein 28 23.1 63 0.0021 22.3 3.1 25 82-107 11-35 (46)
95 2ep0_A Zinc finger protein 28 23.0 88 0.003 21.5 3.9 27 81-108 10-36 (46)
96 1yui_A GAGA-factor; complex (D 22.9 51 0.0017 24.0 2.7 23 82-105 23-45 (54)
97 2emm_A ZFP-95, zinc finger pro 22.7 73 0.0025 21.9 3.4 25 82-107 11-35 (46)
98 2eov_A Zinc finger protein 484 22.7 65 0.0022 22.1 3.1 26 82-108 11-36 (46)
99 2emx_A Zinc finger protein 268 22.6 63 0.0022 22.0 3.0 24 82-106 9-32 (44)
100 2yu8_A Zinc finger protein 347 22.5 47 0.0016 23.0 2.3 24 81-105 10-33 (46)
101 2ytj_A Zinc finger protein 484 22.5 76 0.0026 21.8 3.5 27 82-109 11-37 (46)
102 2ep2_A Zinc finger protein 484 22.3 83 0.0028 21.6 3.7 28 81-109 10-37 (46)
103 2emj_A Zinc finger protein 28 22.2 64 0.0022 22.3 3.0 24 82-106 11-34 (46)
104 2yto_A Zinc finger protein 484 22.1 66 0.0023 22.2 3.1 24 82-106 11-34 (46)
105 2lvt_A Zinc finger and BTB dom 27.5 19 0.00065 22.0 0.0 21 84-105 3-23 (29)
106 2em7_A Zinc finger protein 224 21.9 99 0.0034 21.2 4.0 27 82-109 11-37 (46)
107 2emz_A ZFP-95, zinc finger pro 21.9 46 0.0016 23.1 2.2 23 82-105 11-33 (46)
108 4fyy_B Aspartate carbamoyltran 21.8 30 0.001 32.5 1.3 16 79-94 131-146 (153)
109 2enh_A Zinc finger protein 28 21.8 71 0.0024 22.0 3.2 27 82-109 11-37 (46)
110 2elu_A Zinc finger protein 406 21.6 51 0.0018 22.1 2.0 24 81-105 7-30 (37)
111 2em2_A Zinc finger protein 28 21.4 71 0.0024 22.1 3.1 24 82-106 11-34 (46)
112 1x6h_A Transcriptional repress 21.4 69 0.0024 25.4 3.5 23 82-105 14-36 (86)
113 2ytg_A ZFP-95, zinc finger pro 21.3 73 0.0025 21.9 3.2 28 81-109 10-37 (46)
114 2yrm_A B-cell lymphoma 6 prote 21.3 64 0.0022 22.0 2.8 25 82-107 9-33 (43)
115 2yth_A Zinc finger protein 224 21.1 81 0.0028 21.7 3.4 27 82-109 11-37 (46)
116 2eq2_A Zinc finger protein 347 20.9 71 0.0024 22.0 3.0 27 82-109 11-37 (46)
117 2ysp_A Zinc finger protein 224 20.7 91 0.0031 21.4 3.6 28 81-109 10-37 (46)
118 2el6_A Zinc finger protein 268 20.7 1.1E+02 0.0037 21.0 4.0 27 82-109 11-37 (46)
119 2epr_A POZ-, at HOOK-, and zin 20.7 94 0.0032 21.7 3.7 28 81-109 10-37 (48)
120 2en9_A Zinc finger protein 28 20.6 63 0.0022 22.3 2.7 25 82-107 11-35 (46)
121 2ytm_A Zinc finger protein 28 20.6 46 0.0016 23.2 1.9 24 82-106 11-34 (46)
122 2ytt_A Zinc finger protein 473 20.6 45 0.0015 23.2 1.8 23 82-105 11-33 (46)
123 1x6e_A Zinc finger protein 24; 20.5 85 0.0029 24.2 3.7 38 81-119 12-50 (72)
124 2ytq_A Zinc finger protein 268 20.5 96 0.0033 21.3 3.7 27 82-109 11-37 (46)
125 2emy_A Zinc finger protein 268 20.4 88 0.003 21.5 3.4 25 81-106 10-34 (46)
126 2ytk_A Zinc finger protein 347 20.4 76 0.0026 21.8 3.1 26 81-107 10-35 (46)
127 2eox_A Zinc finger protein 473 20.3 39 0.0013 23.2 1.5 24 82-106 11-34 (44)
128 2en1_A Zinc finger protein 224 20.3 97 0.0033 21.2 3.7 27 82-109 11-37 (46)
129 2epc_A Zinc finger protein 32; 20.1 90 0.0031 20.8 3.4 24 82-106 10-33 (42)
130 2enc_A Zinc finger protein 224 20.0 1E+02 0.0036 21.0 3.8 27 82-109 11-37 (46)
No 1
>2bw3_A Transposase; DNA recombination, transposition; 2.0A {Musca domestica} SCOP: a.270.1.1 c.55.3.12 PDB: 2bw3_B
Probab=100.00 E-value=1.1e-60 Score=560.46 Aligned_cols=452 Identities=15% Similarity=0.202 Sum_probs=356.0
Q ss_pred cchhHHHHHHHHHHHHHHcCCccccccCHHHHHHHHHHHHcCCCC--------CCCChhhhhhhHHHHHHHHHHHHHHHH
Q 047254 234 GKKSQKEIISAICKFFYYAGVPLEAANSQYFHNMLELVAQYGQGL--------VGPPSQLIFGDLLQEEIETIRNNLAEH 305 (836)
Q Consensus 234 ~~~~~~~~~~~Iar~i~~~~iPfs~ve~~~F~~ml~~l~~~~p~~--------~~PS~~~l~~~iL~~~~~~v~~~l~~~ 305 (836)
....++++.++|++||+.+++||+++++|+|+.|++.+++.||+| .+||++++++.+++...+..+..++.+
T Consensus 12 ~~~~~~~~~~~l~~~i~~~~~Pf~~ve~~~F~~~l~~l~~~~p~~~~~~~~~~~~ps~~~~~~~i~~~~~~~~~~l~~~l 91 (534)
T 2bw3_A 12 SADCKKEAIEKCAQWVVRDCRPFSAVSGSGFIDMIKFFIKVKAEYGEHVNVEELLPSPITLSRKVTSDAKEKKALIGREI 91 (534)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCGGGGGCHHHHHHHHHHHHHHHHHCSCBCHHHHSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhhHHHHHHHHHHHHHhcCCcchhhCCHHHHHHHHHHHhhhhhhccccchhhcCCCcccHHHHHHHHHHHHHHHHHHHH
Confidence 456788899999999999999999999999999999997666644 699999999998876444444556777
Q ss_pred HhhhhccceEEEecccccC-CCCeEEEEEeecCCcc----eEEEeeeCCCCCcchHHHHHHHHHHHHHhcCcc--EEEEE
Q 047254 306 RASWAVTGCSVMADSWTDS-ESRTLINLFVSSPHGL----YFLSSVDATDIVEDASNLFKLLDKVVEEMGEEN--VVQVI 378 (836)
Q Consensus 306 ~~~w~~~~~sI~~D~WTd~-~~~~~l~~~v~~~~g~----~fL~svd~s~~~htge~I~e~l~~viee~g~~n--Vv~vv 378 (836)
+..|...+|+|++|+|||. +++++|+|+||++++. .+|.........|||++|++.|.++|++||+++ ++++|
T Consensus 92 ~~~~~~~~~sl~~D~wt~~~~~~~~l~i~v~~i~~~~~~~~~L~~~~~~~~~~t~~~i~~~i~~~l~~~~l~~~~~v~~v 171 (534)
T 2bw3_A 92 KSAVEKDGASATIDLWTDNYIKRNFLGVTLHYHENNELRDLILGLKSLDFERSTAENIYKKLKAIFSQFNVEDLSSIKFV 171 (534)
T ss_dssp HHHHHTTCCEEEEEEEEETTTTEEEEEEEEEEEETTEEEEEEEEEEEECGGGCSHHHHHHHHHHHHHTTTCCCCTTCEEE
T ss_pred HhhhcCCceEEEEecccCCCCCcceeEEEEEEeeCCceEEEEEeEeecCCCCCCHHHHHHHHHHHHHHcCCCcccceeEE
Confidence 7778779999999999998 6899999999997532 244454444436999999999999999999965 88999
Q ss_pred EeCCcchhhhhhHHHHhcCCccccCchHHHHHHHHhhh-hcchhHHHHHHHHHHHHHHHHhhHHHHHHHHHhhccCcccc
Q 047254 379 TQNTPSYKSAGKMLEEKRKNLFWTPCATYCIDKMLDGF-LNLKSVWKCMEMAQKITKFIYNHIRLLNLMKKEFTQGQELL 457 (836)
Q Consensus 379 TDnasn~~~a~~lL~~k~p~i~~~~C~aH~LnLvl~di-~k~~~v~~~i~k~~~Iv~fi~~s~~~l~~~r~k~~~~~~Li 457 (836)
||||+||+++.+ ..+|+||+||+|||+++++ .+++.+..++.++++|++||++|+.+. ++ ...|+
T Consensus 172 tDnasn~~~~~~-------~~~~i~C~~H~lnLi~~~~l~~~~~~~~~l~~~~~iv~~i~~s~~~~-----~l--~~~l~ 237 (534)
T 2bw3_A 172 TDRGANVVKSLA-------NNIRINCSSHLLSNVLENSFEETPELNMPILACKNIVKYFKKANLQH-----RL--RSSLK 237 (534)
T ss_dssp ECCCHHHHHHTT-------TSEEEECHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTCGG-----GG--CCCCC
T ss_pred CCCHHHHHHHHh-------cCcccccHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHhccHhhH-----hc--ccccC
Confidence 999999988754 2478999999999999994 458889999999999999999887542 22 35789
Q ss_pred ccccccchhhHHHHHHHHHhHHHHHHHhhhccccccccccCccchhHHhhhCCHHHHHHHHHHHHhHHHHHHHHHHHhcC
Q 047254 458 MPSVTRFASSFTTLQNLLDHRIDLRRMFQSEIWTSSWFSKSDKGKEVENIVLNAKFWKKVLYVVRSVNPIMKVLQKVDTG 537 (836)
Q Consensus 458 ~~~~TRW~S~~~~L~rll~~k~~L~~~~~s~e~~~s~~~k~~~g~~v~~~il~~~fW~~l~~i~~il~Pl~~~l~~l~~d 537 (836)
.+++|||+|+|.||+++++++.+|..++.+.++. ..++..+|..+..++.+|+||..+++.++++
T Consensus 238 ~~~~tRW~S~~~~L~~~l~~~~~i~~~~~~~~~~---------------~~~~~~dw~~~~~l~~iL~pf~~~t~~l~~~ 302 (534)
T 2bw3_A 238 SECPTRWNSTYTMLRSILDNWESVIQILSEAGET---------------QRIVHINKSIIQTMVNILDGFERIFKELQTC 302 (534)
T ss_dssp CSSCGGGCHHHHHHHHHHHTHHHHHHHHHHTTCG---------------GGTTTCCHHHHHHHHHHHHTTHHHHHHHTCS
T ss_pred CCCCCCcHhHHHHHHHHHHHHHHHHHHHHhcccc---------------cCCchhhHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999998765431 1244567999999999999999999999998
Q ss_pred CCCchhcHHHHHHHHHHHHHHHhCCC---cccccchHHHHHHHhhhccCCcchhheeecCccCCCC-CCCCCchHHHH--
Q 047254 538 QSLSMPYVYNDMYRAKLAIQSFHGDD---VRKYGPFWNVIDNHWDLLGHHPLYVAAYFLNPSYRYR-PHFVAYPEVVR-- 611 (836)
Q Consensus 538 ~~ps~~~iy~~~~~~k~~I~~~~~~~---~~~~~~~~~~id~rw~~~l~~pl~~aA~~LnPr~~y~-~~~~~~~ei~~-- 611 (836)
.+|++++||+.|..+++.++....+. ...+..+++.+++||+... +|+|++|++|||+|+|. +.+.. ++..
T Consensus 303 ~~pt~~~v~~~~~~l~~~l~~~~~~~~~~~~l~~~m~~~l~ky~~~~~-~~~~~~A~~LdPr~~~l~p~~k~--~~~~~~ 379 (534)
T 2bw3_A 303 SSPSLCFVVPSILKVKEICSPDVGDVADIAKLKVNIIKNVRIIWEENL-SIWHYTAFFFYPPALHMQQEKVA--QIKEFC 379 (534)
T ss_dssp SSCCGGGHHHHHHHHHHHTCCCTTSCHHHHHHHHHHHHHHHHTTGGGC-CHHHHHHHHTSGGGTTSCCSCHH--HHHHHH
T ss_pred CCccHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhhc-chhhheeeEecccccccCHHHHH--HHHHHH
Confidence 89999999999999887664221111 1234577888999998875 68999999999999763 32211 1110
Q ss_pred -------HHHHHHH---HhcCC----hHH----H-----------------------------HHHHHhhhhhhhhhhcc
Q 047254 612 -------GLNECIV---RLEPD----KVR----R-----------------------------IYAMSQISDYTTAKADF 644 (836)
Q Consensus 612 -------~l~~~i~---~l~~~----~~~----~-----------------------------~~i~~el~~y~~~~~~f 644 (836)
.+.+.+. ++.+. ... . ..+..||..|....
T Consensus 380 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~yl~~~--- 456 (534)
T 2bw3_A 380 LSKMEDLELINRMSSFNELSATQLNQSDSNSHNSIDLTSHSKDISTTSFFFPQLTQNNSREPPVCPSDEFEFYRKEI--- 456 (534)
T ss_dssp HHHHHHHHHHHHHHHTTCSCSSSCCC----------------CCCHHHHHCHHHHHHHHHSCCCCHHHHHHHHHTCC---
T ss_pred hhhhcchHHHHHHHHHHHhhhhhccCCCCcccccccccccccCccchHHHHHHHhhcCCCCCCCChHHHHHHHHcCC---
Confidence 0111111 11110 000 0 00123333332210
Q ss_pred CcHHHHhhhccccccchhccccCCchhHHHHHHHHhcccccCcccCCCcchhhhhhhcccccchHHhhhhHHHHHHhHHH
Q 047254 645 GTELAISTRTELEPAAWWQQHGISSLQLQQIAVRILSQTCSSIGCEHKWSIYDQVHGQRHSRAAQKRINDLIYVHYNLRL 724 (836)
Q Consensus 645 ~~~~ai~~~~~~~Pl~WW~~~~~~~P~L~klA~~iLsip~SSa~~ER~FS~~~~I~tk~RnrL~~e~l~~Lvfv~~N~~L 724 (836)
.......+|+.||+.++..||.|++||++||++||||++|||+||+++.+++++||||+++++++|+|+++|+++
T Consensus 457 -----~~~~~~~~~l~wW~~~~~~~p~L~~~a~~~l~~p~ss~~~er~fs~~~~~~~~~r~~l~~~~~~~l~~~~~~~~~ 531 (534)
T 2bw3_A 457 -----VILSEDFKVMEWWNLNSKKYPKLSKLALSLLSIPASSAASERTFSLAGNIITEKRNRIGQQTVDSLLFLNSFYKN 531 (534)
T ss_dssp -----CCCCTTCCHHHHHHHTTTTSHHHHHHHHHHHTSCSCTTTTHHHHHHTHHHHHCTTTCCCHHHHHHHHHHHHHHHH
T ss_pred -----CCcCCCCChHHHHHhCCccCChHHHHHHHHhcCCcccccccccccccccccCcccccCCHHHHHHHHHHHHHHHH
Confidence 001235789999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred H
Q 047254 725 R 725 (836)
Q Consensus 725 ~ 725 (836)
-
T Consensus 532 ~ 532 (534)
T 2bw3_A 532 F 532 (534)
T ss_dssp H
T ss_pred h
Confidence 4
No 2
>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.51 E-value=5.3e-05 Score=63.13 Aligned_cols=43 Identities=23% Similarity=0.361 Sum_probs=34.0
Q ss_pred cCCCCCccccceeccC-----CcCeeEcccCCCccc------CchHHHHHHhhc
Q 047254 64 LGCIDPGWEHGVAQDQ-----RKKKVKCNYCGKVVS------GGINRFKQHLAR 106 (836)
Q Consensus 64 ~~~~d~~W~h~~~~~~-----~~~~~~C~yC~~~~~------ggi~r~k~HL~~ 106 (836)
.++++.+|+|+..... ...+++|+||++.++ +|++-|+.||..
T Consensus 4 ~~~~S~VW~~F~k~~~~~~~~~~~~A~Ck~C~k~ls~g~~s~~GTS~L~rHL~~ 57 (76)
T 2djr_A 4 GSSGSEAWEYFHLAPARAGHHPNQYATCRLCGRQVSRGPGVNVGTTALWKHLKS 57 (76)
T ss_dssp SSCCGGGGGGEEECCCCSSSCSCSCEEESSSCCBCCCCSSCCSSSCHHHHHHHH
T ss_pred CCccChHHhccccccccCCCCCCCEEECCCCCCccCCCCCCCCchHHHHHHHHH
Confidence 4468999999984321 146899999999995 489999999963
No 3
>2ct5_A Zinc finger BED domain containing protein 1; DREF homolog, putative C-like transposable element, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.6
Probab=97.17 E-value=0.00024 Score=58.83 Aligned_cols=43 Identities=21% Similarity=0.308 Sum_probs=34.7
Q ss_pred cCCCCCccccceec-cC-C----cCeeEcccCCCcc--cCchHHHHHHhhc
Q 047254 64 LGCIDPGWEHGVAQ-DQ-R----KKKVKCNYCGKVV--SGGINRFKQHLAR 106 (836)
Q Consensus 64 ~~~~d~~W~h~~~~-~~-~----~~~~~C~yC~~~~--~ggi~r~k~HL~~ 106 (836)
.+.++++|+|+... ++ + +.++.|++|++.+ +||++-|+.||..
T Consensus 4 ~~~~S~VW~~F~k~~~~~g~il~~~~a~Ck~C~~~l~~~g~TSnL~rHL~~ 54 (73)
T 2ct5_A 4 GSSGSKVWKYFGFDTNAEGCILQWKKIYCRICMAQIAYSGNTSNLSYHLEK 54 (73)
T ss_dssp SCSCCCTTSSSCCCCCSSSCGGGSSCCEETTTTEECCCCSSTHHHHHHHHH
T ss_pred CCccChHHHhCCccccCCCccccCCEEECCCCCccccCCCChHhHHHHHHH
Confidence 45689999999843 22 1 2789999999997 8999999999963
No 4
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=64.44 E-value=1.8 Score=36.48 Aligned_cols=20 Identities=25% Similarity=0.572 Sum_probs=16.8
Q ss_pred cCeeEcccCCCcccCchHHH
Q 047254 81 KKKVKCNYCGKVVSGGINRF 100 (836)
Q Consensus 81 ~~~~~C~yC~~~~~ggi~r~ 100 (836)
...|+|.||++++.||.+..
T Consensus 43 tGiW~C~~Cg~~~aggay~~ 62 (83)
T 1vq8_Z 43 TGIWQCSYCDYKFTGGSYKP 62 (83)
T ss_dssp TTEEEETTTCCEEECCSSSS
T ss_pred CCeEECCCCCCEecCCEecc
Confidence 46899999999998886654
No 5
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*
Probab=64.36 E-value=2.8 Score=41.54 Aligned_cols=25 Identities=28% Similarity=0.676 Sum_probs=22.4
Q ss_pred cCeeEcccCCCcccCchHHHHHHhh
Q 047254 81 KKKVKCNYCGKVVSGGINRFKQHLA 105 (836)
Q Consensus 81 ~~~~~C~yC~~~~~ggi~r~k~HL~ 105 (836)
+.-.+|.+|+..++..+.+||.||.
T Consensus 167 ~~~L~C~~C~~~f~n~~~~LK~HL~ 191 (204)
T 3sp4_A 167 QEDLKCWRCGETFGRHFTKLKAHLQ 191 (204)
T ss_dssp GSCCBCTTTCCBCTTCHHHHHHHHH
T ss_pred CCCceeCCCCchhhcccHHHHHHHH
Confidence 4568999999999888999999996
No 6
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=50.25 E-value=4.3 Score=36.11 Aligned_cols=21 Identities=24% Similarity=0.564 Sum_probs=16.9
Q ss_pred cCeeEcccCCCcccCchHHHH
Q 047254 81 KKKVKCNYCGKVVSGGINRFK 101 (836)
Q Consensus 81 ~~~~~C~yC~~~~~ggi~r~k 101 (836)
...|+|.+|+++|.||.+...
T Consensus 76 vGIW~C~~Cgk~fAGGAy~~~ 96 (116)
T 3cc2_Z 76 TGIWQCSYCDYKFTGGSYKPE 96 (116)
T ss_dssp TTEEEETTTCCEEECCSSSSS
T ss_pred ceeEECCCCCCEEECCCcccc
Confidence 358999999999988866543
No 7
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=48.67 E-value=11 Score=22.79 Aligned_cols=22 Identities=18% Similarity=0.519 Sum_probs=17.2
Q ss_pred eeEcccCCCcccCchHHHHHHhh
Q 047254 83 KVKCNYCGKVVSGGINRFKQHLA 105 (836)
Q Consensus 83 ~~~C~yC~~~~~ggi~r~k~HL~ 105 (836)
..+|..|++.|.. ...|+.|+.
T Consensus 3 ~~~C~~C~k~f~~-~~~l~~H~~ 24 (27)
T 2kvh_A 3 PFSCSLCPQRSRD-FSAMTKHLR 24 (27)
T ss_dssp CEECSSSSCEESS-HHHHHHHHH
T ss_pred CccCCCcChhhCC-HHHHHHHHH
Confidence 5789999999963 567787863
No 8
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=46.44 E-value=13 Score=24.40 Aligned_cols=23 Identities=35% Similarity=0.675 Sum_probs=18.2
Q ss_pred CeeEcccCCCcccCchHHHHHHhh
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLA 105 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~ 105 (836)
+..+|.+|++.|. ....|+.|+.
T Consensus 8 k~~~C~~C~k~f~-~~~~l~~H~~ 30 (36)
T 2els_A 8 KIFTCEYCNKVFK-FKHSLQAHLR 30 (36)
T ss_dssp CCEECTTTCCEES-SHHHHHHHHH
T ss_pred CCEECCCCCceeC-CHHHHHHHHH
Confidence 5689999999996 3667788864
No 9
>3cw1_L U1 small nuclear ribonucleoprotein C; PRE-mRNA splicing, spliceosome, RNA-binding domain, SM fold, finger, RNA recognition motif, 5' splice site; 5.49A {Homo sapiens} PDB: 1uw2_A 2vrd_A
Probab=45.64 E-value=6.2 Score=32.63 Aligned_cols=27 Identities=22% Similarity=0.421 Sum_probs=22.0
Q ss_pred eeEcccCCCcc-cCchHHHHHHhhccCC
Q 047254 83 KVKCNYCGKVV-SGGINRFKQHLARIQG 109 (836)
Q Consensus 83 ~~~C~yC~~~~-~ggi~r~k~HL~~~~~ 109 (836)
+.-|.||+..+ ....+--|+|+.|.++
T Consensus 3 kYyCdYCd~~lt~Ds~s~Rk~H~~G~kH 30 (77)
T 3cw1_L 3 KFYCDYCDTYLTHDSPSVRKTHCSGRKH 30 (77)
T ss_pred CcccccCCceecCCCHHHHHHHHccHHH
Confidence 45799999999 6667767999998764
No 10
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.65 E-value=20 Score=23.29 Aligned_cols=23 Identities=26% Similarity=0.403 Sum_probs=17.7
Q ss_pred CeeEcccCCCcccCchHHHHHHhh
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLA 105 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~ 105 (836)
+..+|.+|++.|.- ...|+.|+.
T Consensus 8 k~~~C~~C~k~f~~-~~~l~~H~~ 30 (36)
T 2elt_A 8 KPYKCPQCSYASAI-KANLNVHLR 30 (36)
T ss_dssp CSEECSSSSCEESS-HHHHHHHHH
T ss_pred CCCCCCCCCcccCC-HHHHHHHHH
Confidence 46899999999953 566777764
No 11
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=38.56 E-value=16 Score=22.18 Aligned_cols=22 Identities=14% Similarity=0.495 Sum_probs=17.1
Q ss_pred eeEcccCCCcccCchHHHHHHhh
Q 047254 83 KVKCNYCGKVVSGGINRFKQHLA 105 (836)
Q Consensus 83 ~~~C~yC~~~~~ggi~r~k~HL~ 105 (836)
..+|..|++.|.- -+.|+.|+.
T Consensus 3 ~~~C~~C~k~f~~-~~~l~~H~~ 24 (27)
T 2kvg_A 3 PYRCPLCRAGCPS-LASMQAHMR 24 (27)
T ss_dssp TEEETTTTEEESC-HHHHHHHHT
T ss_pred CcCCCCCCcccCC-HHHHHHHHH
Confidence 4689999999963 567888863
No 12
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=38.53 E-value=25 Score=21.18 Aligned_cols=22 Identities=27% Similarity=0.542 Sum_probs=17.4
Q ss_pred eeEcccCCCcccCchHHHHHHhh
Q 047254 83 KVKCNYCGKVVSGGINRFKQHLA 105 (836)
Q Consensus 83 ~~~C~yC~~~~~ggi~r~k~HL~ 105 (836)
..+|..|++.|.. -..|+.|+.
T Consensus 3 ~~~C~~C~k~f~~-~~~l~~H~~ 24 (28)
T 2kvf_A 3 PYSCSVCGKRFSL-KHQMETHYR 24 (28)
T ss_dssp SEECSSSCCEESC-HHHHHHHHT
T ss_pred CccCCCCCcccCC-HHHHHHHHH
Confidence 4689999999963 567888864
No 13
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=38.20 E-value=28 Score=22.41 Aligned_cols=24 Identities=17% Similarity=0.351 Sum_probs=18.7
Q ss_pred CeeEcccCCCcccCchHHHHHHhhc
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLAR 106 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~ 106 (836)
+..+|.+|++.|.- -..|+.|+..
T Consensus 6 k~~~C~~C~k~f~~-~~~l~~H~~~ 29 (35)
T 1srk_A 6 RPFVCRICLSAFTT-KANCARHLKV 29 (35)
T ss_dssp SCEECSSSCCEESS-HHHHHHHHGG
T ss_pred cCeeCCCCCcccCC-HHHHHHHHHH
Confidence 46899999999963 5678888753
No 14
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.89 E-value=21 Score=23.30 Aligned_cols=23 Identities=26% Similarity=0.577 Sum_probs=18.1
Q ss_pred CeeEcccCCCcccCchHHHHHHhh
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLA 105 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~ 105 (836)
+..+|.+|++.|.- -..|+.|+.
T Consensus 8 k~~~C~~C~k~f~~-~~~l~~H~~ 30 (36)
T 2elq_A 8 KPFKCSLCEYATRS-KSNLKAHMN 30 (36)
T ss_dssp CSEECSSSSCEESC-HHHHHHHHH
T ss_pred CCccCCCCCchhCC-HHHHHHHHH
Confidence 56899999999963 567888864
No 15
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=36.07 E-value=20 Score=21.75 Aligned_cols=21 Identities=19% Similarity=0.553 Sum_probs=16.2
Q ss_pred eEcccCCCcccCchHHHHHHhh
Q 047254 84 VKCNYCGKVVSGGINRFKQHLA 105 (836)
Q Consensus 84 ~~C~yC~~~~~ggi~r~k~HL~ 105 (836)
.+|..|++.|.. -+.|+.|+.
T Consensus 3 ~~C~~C~~~f~~-~~~l~~H~~ 23 (29)
T 1ard_A 3 FVCEVCTRAFAR-QEHLKRHYR 23 (29)
T ss_dssp CBCTTTCCBCSS-HHHHHHHHH
T ss_pred eECCCCCcccCC-HHHHHHHHH
Confidence 589999999963 566777764
No 16
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=35.53 E-value=30 Score=20.90 Aligned_cols=23 Identities=30% Similarity=0.693 Sum_probs=17.3
Q ss_pred eeEcccCCCcccCchHHHHHHhhc
Q 047254 83 KVKCNYCGKVVSGGINRFKQHLAR 106 (836)
Q Consensus 83 ~~~C~yC~~~~~ggi~r~k~HL~~ 106 (836)
..+|.+|++.|.. .+.|+.|+..
T Consensus 3 ~~~C~~C~~~f~~-~~~l~~H~~~ 25 (30)
T 2m0d_A 3 PYQCDYCGRSFSD-PTSKMRHLET 25 (30)
T ss_dssp CEECTTTCCEESC-HHHHHHHHHT
T ss_pred CccCCCCCcccCC-HHHHHHHHHH
Confidence 5789999999963 5667778653
No 17
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=35.39 E-value=23 Score=21.33 Aligned_cols=22 Identities=36% Similarity=0.739 Sum_probs=15.7
Q ss_pred eeEcccCCCcccCchHHHHHHhh
Q 047254 83 KVKCNYCGKVVSGGINRFKQHLA 105 (836)
Q Consensus 83 ~~~C~yC~~~~~ggi~r~k~HL~ 105 (836)
..+|..|++.|.. -..|+.|+.
T Consensus 2 ~~~C~~C~k~f~~-~~~l~~H~~ 23 (29)
T 2m0f_A 2 PLKCRECGKQFTT-SGNLKRHLR 23 (29)
T ss_dssp CEECTTTSCEESC-HHHHHHHHH
T ss_pred CccCCCCCCccCC-hhHHHHHHH
Confidence 4689999999953 455666653
No 18
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=34.95 E-value=11 Score=30.92 Aligned_cols=20 Identities=25% Similarity=0.502 Sum_probs=17.1
Q ss_pred CeeEcccCCCcccCchHHHH
Q 047254 82 KKVKCNYCGKVVSGGINRFK 101 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k 101 (836)
..|+|+.|++.+.||.+...
T Consensus 44 GIW~C~~C~~~~AGGAy~~~ 63 (73)
T 1ffk_W 44 SIWVCGHCGYKIAGGAYTPE 63 (73)
T ss_pred EEEECCCCCcEEECCCcccc
Confidence 57999999999999977654
No 19
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=34.85 E-value=20 Score=23.22 Aligned_cols=22 Identities=18% Similarity=0.428 Sum_probs=17.2
Q ss_pred eEcccCCCcccCchHHHHHHhhc
Q 047254 84 VKCNYCGKVVSGGINRFKQHLAR 106 (836)
Q Consensus 84 ~~C~yC~~~~~ggi~r~k~HL~~ 106 (836)
.+|..|++.|.. .+.|+.|+.-
T Consensus 3 ~~C~~C~k~F~~-~~~L~~H~~~ 24 (33)
T 1rim_A 3 FACPECPKRFMR-SDHLSKHITL 24 (33)
T ss_dssp CCCSSSCCCCSS-HHHHHHHHHH
T ss_pred ccCCCCCchhCC-HHHHHHHHHH
Confidence 579999999963 6678888753
No 20
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=33.78 E-value=32 Score=21.96 Aligned_cols=24 Identities=21% Similarity=0.405 Sum_probs=18.7
Q ss_pred CeeEcccCCCcccCchHHHHHHhhc
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLAR 106 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~ 106 (836)
+..+|.+|++.|.- -+.|+.|+..
T Consensus 6 k~~~C~~C~k~f~~-~~~L~~H~~~ 29 (35)
T 2elx_A 6 SGYVCALCLKKFVS-SIRLRSHIRE 29 (35)
T ss_dssp CSEECSSSCCEESS-HHHHHHHHHH
T ss_pred CCeECCCCcchhCC-HHHHHHHHHH
Confidence 46899999999963 5678888753
No 21
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.75 E-value=24 Score=22.93 Aligned_cols=23 Identities=30% Similarity=0.567 Sum_probs=17.6
Q ss_pred CeeEcccCCCcccCchHHHHHHhh
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLA 105 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~ 105 (836)
+..+|..|++.|.. -..|+.|+.
T Consensus 8 ~~~~C~~C~k~f~~-~~~l~~H~~ 30 (36)
T 2elr_A 8 KTHLCDMCGKKFKS-KGTLKSHKL 30 (36)
T ss_dssp SSCBCTTTCCBCSS-HHHHHHHHH
T ss_pred CCeecCcCCCCcCc-hHHHHHHHH
Confidence 46799999999963 566777764
No 22
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=33.56 E-value=28 Score=21.08 Aligned_cols=22 Identities=23% Similarity=0.436 Sum_probs=16.9
Q ss_pred eeEcccCCCcccCchHHHHHHhh
Q 047254 83 KVKCNYCGKVVSGGINRFKQHLA 105 (836)
Q Consensus 83 ~~~C~yC~~~~~ggi~r~k~HL~ 105 (836)
..+|..|++.|.. .+.|+.|+.
T Consensus 2 ~~~C~~C~k~f~~-~~~l~~H~~ 23 (29)
T 1rik_A 2 KFACPECPKRFMR-SDHLTLHIL 23 (29)
T ss_dssp CEECSSSSCEESC-SHHHHHHHT
T ss_pred CccCCCCCchhCC-HHHHHHHHH
Confidence 3689999999953 567788875
No 23
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=33.17 E-value=32 Score=20.40 Aligned_cols=21 Identities=19% Similarity=0.482 Sum_probs=16.3
Q ss_pred eEcccCCCcccCchHHHHHHhh
Q 047254 84 VKCNYCGKVVSGGINRFKQHLA 105 (836)
Q Consensus 84 ~~C~yC~~~~~ggi~r~k~HL~ 105 (836)
.+|..|++.|.. -..|+.|..
T Consensus 2 ~~C~~C~k~f~~-~~~l~~H~~ 22 (27)
T 1znf_A 2 YKCGLCERSFVE-KSALSRHQR 22 (27)
T ss_dssp CBCSSSCCBCSS-HHHHHHHGG
T ss_pred ccCCCCCCcCCC-HHHHHHHHH
Confidence 479999999963 566888874
No 24
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=32.94 E-value=19 Score=21.91 Aligned_cols=21 Identities=24% Similarity=0.619 Sum_probs=15.6
Q ss_pred eEcccCCCcccCchHHHHHHhh
Q 047254 84 VKCNYCGKVVSGGINRFKQHLA 105 (836)
Q Consensus 84 ~~C~yC~~~~~ggi~r~k~HL~ 105 (836)
.+|.+|++.|.. -+.|+.|+.
T Consensus 3 ~~C~~C~k~f~~-~~~l~~H~~ 23 (30)
T 1klr_A 3 YQCQYCEFRSAD-SSNLKTHIK 23 (30)
T ss_dssp CCCSSSSCCCSC-SHHHHHHHH
T ss_pred ccCCCCCCccCC-HHHHHHHHH
Confidence 589999999953 456777764
No 25
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=30.98 E-value=40 Score=22.40 Aligned_cols=25 Identities=12% Similarity=0.458 Sum_probs=19.3
Q ss_pred CeeEcccCCCcccCchHHHHHHhhcc
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLARI 107 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~~ 107 (836)
+..+|..|++.|. .-+.|+.|+..-
T Consensus 5 k~~~C~~C~k~f~-~~~~L~~H~~~H 29 (39)
T 1njq_A 5 RSYTCSFCKREFR-SAQALGGHMNVH 29 (39)
T ss_dssp SSEECTTTCCEES-SHHHHHHHHHTT
T ss_pred CceECCCCCcccC-CHHHHHHHHHHc
Confidence 4579999999996 357788887643
No 26
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=30.78 E-value=13 Score=30.27 Aligned_cols=19 Identities=32% Similarity=0.609 Sum_probs=16.2
Q ss_pred cCeeEcccCCCcccCchHH
Q 047254 81 KKKVKCNYCGKVVSGGINR 99 (836)
Q Consensus 81 ~~~~~C~yC~~~~~ggi~r 99 (836)
...|+|+-|++.+.||.+.
T Consensus 42 ~GIW~C~~C~~~~AGGAy~ 60 (72)
T 3jyw_9 42 AGIWTCSCCKKTVAGGAYT 60 (72)
T ss_dssp SSCBCCSSSCCCCCCSSSS
T ss_pred CCeEECCCCCCEEeCCccc
Confidence 4689999999999888754
No 27
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.44 E-value=29 Score=22.73 Aligned_cols=23 Identities=22% Similarity=0.556 Sum_probs=17.5
Q ss_pred CeeEcccCCCcccCch-HHHHHHhh
Q 047254 82 KKVKCNYCGKVVSGGI-NRFKQHLA 105 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi-~r~k~HL~ 105 (836)
+..+|.+|++.|.- . ..|+.|+.
T Consensus 8 k~~~C~~C~k~f~~-~~~~L~~H~~ 31 (37)
T 2elp_A 8 RAMKCPYCDFYFMK-NGSDLQRHIW 31 (37)
T ss_dssp CCEECSSSSCEECS-SCHHHHHHHH
T ss_pred CCeECCCCChhhcc-CHHHHHHHHH
Confidence 46899999999963 3 56777764
No 28
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.77 E-value=43 Score=23.13 Aligned_cols=25 Identities=24% Similarity=0.434 Sum_probs=19.5
Q ss_pred CeeEcccCCCcccCchHHHHHHhhcc
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLARI 107 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~~ 107 (836)
+..+|.+|++.|.- ...|+.|+.--
T Consensus 11 k~~~C~~C~k~F~~-~~~L~~H~~~H 35 (45)
T 2epu_A 11 KPFECTHCGKSFRA-KGNLVTHQRIH 35 (45)
T ss_dssp CSEEETTTTEEESS-HHHHHHHHTTT
T ss_pred cCccCCCCCCccCC-hHHHHHHHHHh
Confidence 56899999999963 67788897543
No 29
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=29.59 E-value=29 Score=23.87 Aligned_cols=22 Identities=23% Similarity=0.466 Sum_probs=18.5
Q ss_pred CeeEcccCCCcccCchHHHHHHh
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHL 104 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL 104 (836)
+..+|..|+|.|+ -.+.|+.|+
T Consensus 7 kp~~C~~CgK~F~-~~s~L~~H~ 28 (36)
T 1fv5_A 7 ARFMCLPCGIAFS-SPSTLEAHQ 28 (36)
T ss_dssp CCCEETTTTEECS-CHHHHHHHH
T ss_pred cCeECCCCCCccC-CHhHccCcC
Confidence 5689999999996 377888887
No 30
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=29.56 E-value=22 Score=21.35 Aligned_cols=21 Identities=33% Similarity=0.678 Sum_probs=14.3
Q ss_pred eeEcccCCCcccCchHHHHHHh
Q 047254 83 KVKCNYCGKVVSGGINRFKQHL 104 (836)
Q Consensus 83 ~~~C~yC~~~~~ggi~r~k~HL 104 (836)
..+|.+|++.|.. .+.|+.|+
T Consensus 2 ~~~C~~C~~~f~~-~~~l~~H~ 22 (29)
T 2m0e_A 2 EHKCPHCDKKFNQ-VGNLKAHL 22 (29)
T ss_dssp CCCCSSCCCCCCT-TTHHHHHH
T ss_pred CCcCCCCCcccCC-HHHHHHHH
Confidence 3579999999942 34455564
No 31
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.18 E-value=48 Score=21.41 Aligned_cols=23 Identities=13% Similarity=0.290 Sum_probs=18.4
Q ss_pred CeeEcccCCCcccCchHHHHHHhh
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLA 105 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~ 105 (836)
+..+|..|++.|.- -+.|+.|+.
T Consensus 8 k~~~C~~C~k~f~~-~~~l~~H~~ 30 (36)
T 2elv_A 8 LLYDCHICERKFKN-ELDRDRHML 30 (36)
T ss_dssp CCEECSSSCCEESS-HHHHHHHHT
T ss_pred CCeECCCCCCccCC-HHHHHHHHH
Confidence 46799999999963 577888875
No 32
>2jrr_A Uncharacterized protein; solution structure, SIR90, structural genomics, PSI-2, protein structure initiative; NMR {Silicibacter pomeroyi}
Probab=29.15 E-value=20 Score=28.78 Aligned_cols=17 Identities=24% Similarity=0.458 Sum_probs=13.6
Q ss_pred ccCCcCeeEcccCCCcc
Q 047254 77 QDQRKKKVKCNYCGKVV 93 (836)
Q Consensus 77 ~~~~~~~~~C~yC~~~~ 93 (836)
+|++.+.+.|.||+..|
T Consensus 34 ld~~~g~~~CpYCg~~f 50 (67)
T 2jrr_A 34 IPEDTGWVECPYCDCKY 50 (67)
T ss_dssp CCTTTSEEEETTTTEEE
T ss_pred ccCCCCeEECCCCCCEE
Confidence 44445789999999999
No 33
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.98 E-value=47 Score=23.02 Aligned_cols=27 Identities=37% Similarity=0.610 Sum_probs=20.5
Q ss_pred CeeEcccCCCcccCchHHHHHHhhccCC
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLARIQG 109 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~~~~ 109 (836)
+..+|.+|++.|. --..|+.|+.--.+
T Consensus 11 k~~~C~~C~k~F~-~~~~L~~H~~~H~~ 37 (46)
T 2enf_A 11 KPYKCNECGKVFT-QNSHLVRHRGIHTG 37 (46)
T ss_dssp CSCBCSSSCCBCS-SHHHHHHHHTTTTT
T ss_pred cCeECCCCCcccC-CHHHHHHHHHhhCC
Confidence 5689999999996 36788889754333
No 34
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.84 E-value=34 Score=23.13 Aligned_cols=23 Identities=26% Similarity=0.631 Sum_probs=18.2
Q ss_pred CeeEcccCCCcccCchHHHHHHhh
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLA 105 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~ 105 (836)
+..+|.+|++.|.- ...|+.|+.
T Consensus 10 k~~~C~~C~k~f~~-~~~L~~H~~ 32 (42)
T 2en2_A 10 KPYKCETCGARFVQ-VAHLRAHVL 32 (42)
T ss_dssp CSEECTTTCCEESS-HHHHHHHTH
T ss_pred CCEeCCCcChhhCC-HHHHHHHHH
Confidence 56899999999963 567777864
No 35
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.82 E-value=54 Score=22.63 Aligned_cols=27 Identities=22% Similarity=0.480 Sum_probs=20.5
Q ss_pred CeeEcccCCCcccCchHHHHHHhhccCC
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLARIQG 109 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~~~~ 109 (836)
+..+|.+|++.|.- -..|+.|+.--.|
T Consensus 11 ~~~~C~~C~k~F~~-~~~L~~H~~~H~~ 37 (46)
T 2emi_A 11 RHYECSECGKAFIQ-KSTLSMHQRIHRG 37 (46)
T ss_dssp CCEECSSSCCEESS-HHHHHHHHGGGCS
T ss_pred CCCCCCCCCcccCC-HHHHHHHHhHhCC
Confidence 56899999999963 6778888764433
No 36
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.77 E-value=41 Score=23.30 Aligned_cols=27 Identities=37% Similarity=0.567 Sum_probs=20.8
Q ss_pred CeeEcccCCCcccCchHHHHHHhhccCC
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLARIQG 109 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~~~~ 109 (836)
+..+|.+|++.|. .-..|+.|+..-.|
T Consensus 11 k~~~C~~C~k~f~-~~~~L~~H~~~H~~ 37 (46)
T 2eq3_A 11 KPYECNQCGKAFS-VRSSLTTHQAIHTG 37 (46)
T ss_dssp CSSEETTTTEECS-SHHHHHHHHTTSCC
T ss_pred CCeECCCCChhhC-CHHHHHHHHHHhCC
Confidence 5689999999996 36788889864433
No 37
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.75 E-value=29 Score=22.65 Aligned_cols=23 Identities=26% Similarity=0.476 Sum_probs=17.6
Q ss_pred CeeEcccCCCcccCchHHHHHHhh
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLA 105 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~ 105 (836)
+..+|.+|++.|.- -..|+.|+.
T Consensus 8 k~~~C~~C~k~f~~-~~~l~~H~~ 30 (37)
T 2elo_A 8 RSYSCPVCEKSFSE-DRLIKSHIK 30 (37)
T ss_dssp CCCEETTTTEECSS-HHHHHHHHH
T ss_pred CCcCCCCCCCccCC-HHHHHHHHH
Confidence 45799999999953 466777765
No 38
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=28.55 E-value=16 Score=31.14 Aligned_cols=20 Identities=35% Similarity=0.624 Sum_probs=16.5
Q ss_pred cCeeEcccCCCcccCchHHH
Q 047254 81 KKKVKCNYCGKVVSGGINRF 100 (836)
Q Consensus 81 ~~~~~C~yC~~~~~ggi~r~ 100 (836)
...|+|+.|++.+.||.+.+
T Consensus 52 ~GIW~C~~Cg~~~AGGAy~~ 71 (92)
T 3iz5_m 52 VGIWGCKDCGKVKAGGAYTM 71 (92)
T ss_dssp TTEEECSSSCCEEECCSSSS
T ss_pred cceEEcCCCCCEEeCCcccC
Confidence 46899999999998886644
No 39
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=28.53 E-value=16 Score=30.61 Aligned_cols=20 Identities=25% Similarity=0.498 Sum_probs=16.5
Q ss_pred cCeeEcccCCCcccCchHHH
Q 047254 81 KKKVKCNYCGKVVSGGINRF 100 (836)
Q Consensus 81 ~~~~~C~yC~~~~~ggi~r~ 100 (836)
...|+|+-|++.+.||.+..
T Consensus 51 ~GIW~C~kCg~~~AGGAy~~ 70 (83)
T 3j21_i 51 TGIWQCQKCGATFAGGAYLP 70 (83)
T ss_dssp TTEEEETTTCCEEECCSSSS
T ss_pred cCeEEcCCCCCEEeCCcccc
Confidence 46899999999998887643
No 40
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.22 E-value=44 Score=22.00 Aligned_cols=23 Identities=22% Similarity=0.348 Sum_probs=17.6
Q ss_pred CeeEcccCCCcccCchHHHHHH-hh
Q 047254 82 KKVKCNYCGKVVSGGINRFKQH-LA 105 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~H-L~ 105 (836)
+..+|..|++.|.- -+.|+.| ..
T Consensus 8 k~~~C~~C~k~f~~-~~~L~~H~~~ 31 (37)
T 2elm_A 8 HLYYCSQCHYSSIT-KNCLKRHVIQ 31 (37)
T ss_dssp CEEECSSSSCEEEC-HHHHHHHHHH
T ss_pred cCeECCCCCcccCC-HHHHHHHHHH
Confidence 56899999999953 5667888 43
No 41
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.88 E-value=57 Score=22.45 Aligned_cols=27 Identities=26% Similarity=0.471 Sum_probs=20.6
Q ss_pred cCeeEcccCCCcccCchHHHHHHhhccC
Q 047254 81 KKKVKCNYCGKVVSGGINRFKQHLARIQ 108 (836)
Q Consensus 81 ~~~~~C~yC~~~~~ggi~r~k~HL~~~~ 108 (836)
.+..+|.+|++.|.- -..|+.|+..-.
T Consensus 10 ~~~~~C~~C~k~f~~-~~~L~~H~~~H~ 36 (46)
T 2yrj_A 10 EKPYRCGECGKAFAQ-KANLTQHQRIHT 36 (46)
T ss_dssp CCCEECSSSCCEESS-HHHHHHHHTTTS
T ss_pred CCCeECCCCCCccCC-HHHHHHHHHHcC
Confidence 356899999999963 678888975433
No 42
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.88 E-value=60 Score=22.35 Aligned_cols=27 Identities=26% Similarity=0.410 Sum_probs=20.6
Q ss_pred cCeeEcccCCCcccCchHHHHHHhhccC
Q 047254 81 KKKVKCNYCGKVVSGGINRFKQHLARIQ 108 (836)
Q Consensus 81 ~~~~~C~yC~~~~~ggi~r~k~HL~~~~ 108 (836)
.+..+|.+|++.|.. -+.|+.|+..-.
T Consensus 10 ~k~~~C~~C~k~f~~-~~~L~~H~~~H~ 36 (46)
T 2yts_A 10 EKPYICNECGKSFIQ-KSHLNRHRRIHT 36 (46)
T ss_dssp CCSEECSSSCCEESS-HHHHHHHGGGTS
T ss_pred CcCEECCCCChhhCC-hHHHHHHHHhcC
Confidence 356899999999963 677888976433
No 43
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=27.82 E-value=41 Score=21.85 Aligned_cols=23 Identities=22% Similarity=0.450 Sum_probs=17.8
Q ss_pred CeeEcccCCCcccCchHHHHHHhh
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLA 105 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~ 105 (836)
+..+|.+|++.|.- -..|+.|+.
T Consensus 10 k~~~C~~C~k~f~~-~~~l~~H~~ 32 (37)
T 1p7a_A 10 KPFQCPDCDRSFSR-SDHLALHRK 32 (37)
T ss_dssp SSBCCTTTCCCBSS-HHHHHHHHG
T ss_pred CCccCCCCCcccCc-HHHHHHHHH
Confidence 46899999999963 566777864
No 44
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.81 E-value=38 Score=23.35 Aligned_cols=24 Identities=29% Similarity=0.396 Sum_probs=19.2
Q ss_pred CeeEcccCCCcccCchHHHHHHhhc
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLAR 106 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~ 106 (836)
+..+|.+|++.|.- ...|+.|+..
T Consensus 11 k~~~C~~C~k~F~~-~~~L~~H~~~ 34 (44)
T 2epv_A 11 KPYECNECGKAFIW-KSLLIVHERT 34 (44)
T ss_dssp CSEECSSSCCEESS-HHHHHHHHGG
T ss_pred cCeECCCCCcccCc-hHHHHHHHhH
Confidence 46899999999963 6778888754
No 45
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.80 E-value=37 Score=23.55 Aligned_cols=25 Identities=24% Similarity=0.490 Sum_probs=18.6
Q ss_pred cCeeEcccCCCcccCchHHHHHHhhc
Q 047254 81 KKKVKCNYCGKVVSGGINRFKQHLAR 106 (836)
Q Consensus 81 ~~~~~C~yC~~~~~ggi~r~k~HL~~ 106 (836)
.+..+|.+|++.|.- -..|+.|+..
T Consensus 10 ~~~~~C~~C~k~f~~-~~~L~~H~~~ 34 (46)
T 2eor_A 10 EKPYNCEECGKAFIH-DSQLQEHQRI 34 (46)
T ss_dssp CCSEECTTTCCEESS-HHHHHHHHHH
T ss_pred CcCccCCCCCCCcCC-HHHHHHHHHh
Confidence 356899999999963 5667777653
No 46
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=27.45 E-value=40 Score=26.69 Aligned_cols=28 Identities=36% Similarity=0.618 Sum_probs=20.3
Q ss_pred CeeEcccCCCcccCchHHHHHHhhccCCC
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLARIQGE 110 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~~~~~ 110 (836)
+..+|..|+|.|. -.+.|+.|+.-..++
T Consensus 12 kpy~C~~CgK~F~-~~s~L~~H~r~Htg~ 39 (66)
T 2epp_A 12 GILPCGLCGKVFT-DANRLRQHEAQHGVT 39 (66)
T ss_dssp CCCCCTTTCCCCS-CHHHHHHHHHHHTTT
T ss_pred cCcCCCCCCCccC-CHHHHHhhhhhhCCC
Confidence 4679999999996 356788887644443
No 47
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.40 E-value=65 Score=22.25 Aligned_cols=27 Identities=26% Similarity=0.521 Sum_probs=21.0
Q ss_pred CeeEcccCCCcccCchHHHHHHhhccCC
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLARIQG 109 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~~~~ 109 (836)
+..+|.+|++.|. --..|+.|+..-.|
T Consensus 11 k~~~C~~C~k~F~-~~~~L~~H~~~H~~ 37 (46)
T 2emf_A 11 KHFECTECGKAFT-RKSTLSMHQKIHTG 37 (46)
T ss_dssp CCEECSSSCCEES-CHHHHHHHGGGTSC
T ss_pred CCeECCCCCchhC-CHHHHHHHHHHhCC
Confidence 5689999999996 36788889764433
No 48
>3izc_m 60S ribosomal protein RPL43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_m 3o58_g 3o5h_g 3u5e_p 3u5i_p 4b6a_p 1s1i_9
Probab=27.06 E-value=17 Score=30.92 Aligned_cols=20 Identities=30% Similarity=0.581 Sum_probs=16.4
Q ss_pred cCeeEcccCCCcccCchHHH
Q 047254 81 KKKVKCNYCGKVVSGGINRF 100 (836)
Q Consensus 81 ~~~~~C~yC~~~~~ggi~r~ 100 (836)
...|+|+.|++.+.||.+.+
T Consensus 52 ~GIW~C~~C~~~~AGGAy~~ 71 (92)
T 3izc_m 52 AGIWTCSCCKKTVAGGAYTV 71 (92)
T ss_dssp TTEEECTTTCCEEECCSSSS
T ss_pred cceEEcCCCCCEEeCCcccC
Confidence 46899999999998886644
No 49
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.89 E-value=71 Score=21.94 Aligned_cols=27 Identities=30% Similarity=0.552 Sum_probs=20.6
Q ss_pred CeeEcccCCCcccCchHHHHHHhhccCC
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLARIQG 109 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~~~~ 109 (836)
+..+|.+|++.|.. -..|+.|+..-.+
T Consensus 11 k~~~C~~C~k~f~~-~~~L~~H~~~H~~ 37 (46)
T 2eme_A 11 KPYVCDYCGKAFGL-SAELVRHQRIHTG 37 (46)
T ss_dssp CSEECSSSCCEESS-HHHHHHHHGGGCC
T ss_pred CCeECCCCChhhCC-HHHHHHHHHhcCC
Confidence 56899999999963 6788889764433
No 50
>2jvm_A Uncharacterized protein; alpha+beta, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Rhodobacter sphaeroides 2}
Probab=26.86 E-value=26 Score=29.09 Aligned_cols=17 Identities=24% Similarity=0.593 Sum_probs=13.4
Q ss_pred ccCCcCeeEcccCCCcc
Q 047254 77 QDQRKKKVKCNYCGKVV 93 (836)
Q Consensus 77 ~~~~~~~~~C~yC~~~~ 93 (836)
+|++.+.+.|.||+..|
T Consensus 47 ld~~~g~~~CpYCg~~f 63 (80)
T 2jvm_A 47 IPHETGFVECGYCDRRY 63 (80)
T ss_dssp CCTTTCEEECSSSSCEE
T ss_pred ccCCCCeEECCCCCCEE
Confidence 44445789999999998
No 51
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.74 E-value=63 Score=22.33 Aligned_cols=26 Identities=19% Similarity=0.419 Sum_probs=20.2
Q ss_pred cCeeEcccCCCcccCchHHHHHHhhcc
Q 047254 81 KKKVKCNYCGKVVSGGINRFKQHLARI 107 (836)
Q Consensus 81 ~~~~~C~yC~~~~~ggi~r~k~HL~~~ 107 (836)
.+..+|.+|++.|. --..|+.|+.--
T Consensus 10 ~k~~~C~~C~k~F~-~~~~L~~H~~~H 35 (46)
T 2ytp_A 10 ERHYECSECGKAFA-RKSTLIMHQRIH 35 (46)
T ss_dssp CCCEECSSSCCEES-SHHHHHHHHTTT
T ss_pred CCCeECCcCCcccC-CHHHHHHHHHHh
Confidence 35689999999996 367788897643
No 52
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.73 E-value=60 Score=22.33 Aligned_cols=27 Identities=22% Similarity=0.406 Sum_probs=20.4
Q ss_pred CeeEcccCCCcccCchHHHHHHhhccCC
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLARIQG 109 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~~~~ 109 (836)
+..+|.+|++.|. .-..|+.|+.--.|
T Consensus 11 k~~~C~~C~k~f~-~~~~L~~H~~~H~~ 37 (46)
T 2ytf_A 11 KPFECSECQKAFN-TKSNLIVHQRTHTG 37 (46)
T ss_dssp CSEECSSSCCEES-SHHHHHHHHHTSCS
T ss_pred CCcCCCCCCcccC-CHHHHHHHHHHhCC
Confidence 5689999999996 36778888764433
No 53
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.71 E-value=61 Score=22.35 Aligned_cols=28 Identities=32% Similarity=0.554 Sum_probs=21.2
Q ss_pred cCeeEcccCCCcccCchHHHHHHhhccCC
Q 047254 81 KKKVKCNYCGKVVSGGINRFKQHLARIQG 109 (836)
Q Consensus 81 ~~~~~C~yC~~~~~ggi~r~k~HL~~~~~ 109 (836)
.+..+|.+|++.|. .-+.|+.|+..-.|
T Consensus 10 ~k~~~C~~C~k~F~-~~~~L~~H~~~H~~ 37 (46)
T 2eq0_A 10 EKPYKCHECGKVFR-RNSHLARHQLIHTG 37 (46)
T ss_dssp CCCEECTTTCCEES-SHHHHHHHHTTTCC
T ss_pred CCCeECCCCCchhC-CHHHHHHHHHHcCC
Confidence 35689999999996 36788889764433
No 54
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=26.58 E-value=65 Score=21.60 Aligned_cols=27 Identities=22% Similarity=0.506 Sum_probs=20.0
Q ss_pred CeeEcccCCCcccCchHHHHHHhhccCC
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLARIQG 109 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~~~~ 109 (836)
+..+|.+|++.|.- -..|+.|+..-.|
T Consensus 9 k~~~C~~C~k~f~~-~~~L~~H~~~H~~ 35 (42)
T 2el5_A 9 NPYECSECGKAFNR-KDQLISHQRTHAG 35 (42)
T ss_dssp CSEECSSSCCEESS-HHHHHHHHGGGCC
T ss_pred CCccCCCcChhhCC-HHHHHHHHHhcCC
Confidence 56899999999963 5678888754333
No 55
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=26.55 E-value=40 Score=24.03 Aligned_cols=23 Identities=30% Similarity=0.541 Sum_probs=18.2
Q ss_pred CeeEcccCCCcccCchHHHHHHhh
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLA 105 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~ 105 (836)
+..+|.+|++.|.- -+.|+.|+.
T Consensus 6 kp~~C~~C~k~F~~-~~~L~~H~~ 28 (48)
T 3iuf_A 6 KPYACDICGKRYKN-RPGLSYHYA 28 (48)
T ss_dssp SCEECTTTCCEESS-HHHHHHHHH
T ss_pred cCEECCCcCcccCC-HHHHHHHhh
Confidence 46899999999963 566788876
No 56
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.54 E-value=64 Score=21.99 Aligned_cols=26 Identities=19% Similarity=0.335 Sum_probs=20.1
Q ss_pred CeeEcccCCCcccCchHHHHHHhhccC
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLARIQ 108 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~~~ 108 (836)
+..+|..|++.|.- -..|+.|+..-.
T Consensus 11 k~~~C~~C~k~f~~-~~~L~~H~~~H~ 36 (44)
T 2emb_A 11 KRYECSKCQATFNL-RKHLIQHQKTHA 36 (44)
T ss_dssp SSEECTTTCCEESC-HHHHHHHGGGGC
T ss_pred CCeECCCCCCccCC-HHHHHHHHHHcC
Confidence 56899999999963 677888976433
No 57
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.39 E-value=49 Score=25.23 Aligned_cols=32 Identities=22% Similarity=0.486 Sum_probs=24.0
Q ss_pred cCeeEcccCCCcccCchHHHHHHhhccCC-CcccCC
Q 047254 81 KKKVKCNYCGKVVSGGINRFKQHLARIQG-EVAPCK 115 (836)
Q Consensus 81 ~~~~~C~yC~~~~~ggi~r~k~HL~~~~~-~v~~C~ 115 (836)
....+|.+|++.|. .+.|+.|+.- .| ..-.|+
T Consensus 8 ~~~~~C~~C~k~f~--~~~L~~H~~~-~~~~p~~C~ 40 (66)
T 2eod_A 8 KRTQPCTYCTKEFV--FDTIQSHQYQ-CPRLPVACP 40 (66)
T ss_dssp CCEEECSSSCCEEE--HHHHHHHHHH-CSSSEEECT
T ss_pred CCCeeccccCCccC--HHHHHHHHHH-cCCcCccCC
Confidence 45789999999998 8889999865 44 233466
No 58
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.21 E-value=56 Score=22.58 Aligned_cols=27 Identities=26% Similarity=0.439 Sum_probs=20.7
Q ss_pred CeeEcccCCCcccCchHHHHHHhhccCC
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLARIQG 109 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~~~~ 109 (836)
+..+|.+|++.|.. -..|+.|+..-.|
T Consensus 11 k~~~C~~C~k~f~~-~~~L~~H~~~H~~ 37 (46)
T 2emg_A 11 NPFICSECGKVFTH-KTNLIIHQKIHTG 37 (46)
T ss_dssp CSCBCTTTCCBCSS-HHHHHHHHTTTSC
T ss_pred CCEECCccCcccCC-HHHHHHHHHHhCC
Confidence 46899999999963 6788889764433
No 59
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.10 E-value=57 Score=22.15 Aligned_cols=24 Identities=25% Similarity=0.429 Sum_probs=18.6
Q ss_pred CeeEcccCCCcccCchHHHHHHhhc
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLAR 106 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~ 106 (836)
+..+|.+|++.|. --..|+.|+.-
T Consensus 11 k~~~C~~C~k~f~-~~~~L~~H~~~ 34 (44)
T 2eof_A 11 KPYECNECQKAFN-TKSNLMVHQRT 34 (44)
T ss_dssp CSEECTTTCCEES-CHHHHHHHHHH
T ss_pred CCeECCCCCcccC-CHhHHHHHHHH
Confidence 5689999999996 35677778754
No 60
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=32.02 E-value=14 Score=22.05 Aligned_cols=21 Identities=24% Similarity=0.577 Sum_probs=15.0
Q ss_pred eeEcccCCCcccCchHHHHHHh
Q 047254 83 KVKCNYCGKVVSGGINRFKQHL 104 (836)
Q Consensus 83 ~~~C~yC~~~~~ggi~r~k~HL 104 (836)
..+|..|++.|.. -+.|+.|+
T Consensus 2 p~~C~~C~k~f~~-~~~l~~H~ 22 (26)
T 2lvu_A 2 PYVCERCGKRFVQ-SSQLANHI 22 (26)
Confidence 3589999999952 44566665
No 61
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.87 E-value=76 Score=21.83 Aligned_cols=27 Identities=30% Similarity=0.507 Sum_probs=20.6
Q ss_pred CeeEcccCCCcccCchHHHHHHhhccCC
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLARIQG 109 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~~~~ 109 (836)
+..+|.+|++.|. .-..|+.|+.--.|
T Consensus 11 k~~~C~~C~k~f~-~~~~L~~H~~~H~~ 37 (46)
T 2eml_A 11 KPYECSVCGKAFS-HRQSLSVHQRIHSG 37 (46)
T ss_dssp CSEECSSSCCEES-SHHHHHHHHGGGSS
T ss_pred CCeeCCCcCCccC-CHHHHHHHHHHhcC
Confidence 5689999999996 36778888764433
No 62
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.86 E-value=52 Score=22.69 Aligned_cols=27 Identities=26% Similarity=0.458 Sum_probs=20.4
Q ss_pred CeeEcccCCCcccCchHHHHHHhhccCC
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLARIQG 109 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~~~~ 109 (836)
+..+|.+|++.|. --..|+.|+..-.|
T Consensus 11 k~~~C~~C~k~f~-~~~~L~~H~~~H~~ 37 (46)
T 2ep1_A 11 KPYECSDCGKSFI-KKSQLHVHQRIHTG 37 (46)
T ss_dssp CSSCCSSSCCCCS-SHHHHHHHHGGGSS
T ss_pred CCcCCCCCCchhC-CHHHHHHHHHHhCC
Confidence 4689999999996 36778888764333
No 63
>4a17_Y RPL37A, 60S ribosomal protein L32; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_Y 4a1c_Y 4a1e_Y
Probab=25.80 E-value=17 Score=31.62 Aligned_cols=21 Identities=29% Similarity=0.589 Sum_probs=16.9
Q ss_pred cCeeEcccCCCcccCchHHHH
Q 047254 81 KKKVKCNYCGKVVSGGINRFK 101 (836)
Q Consensus 81 ~~~~~C~yC~~~~~ggi~r~k 101 (836)
...|+|+.|++.+.||.+.+-
T Consensus 52 ~GIW~C~kCg~~~AGGAy~~~ 72 (103)
T 4a17_Y 52 VGIWKCKPCKKIIAGGAWELT 72 (103)
T ss_dssp TTEEEETTTTEEEECCSSCSS
T ss_pred cceEEcCCCCCEEeCCcccCC
Confidence 468999999999988876543
No 64
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.65 E-value=58 Score=22.53 Aligned_cols=26 Identities=31% Similarity=0.496 Sum_probs=20.0
Q ss_pred CeeEcccCCCcccCchHHHHHHhhccC
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLARIQ 108 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~~~ 108 (836)
+..+|.+|++.|.- -..|+.|+..-.
T Consensus 11 k~~~C~~C~k~f~~-~~~L~~H~~~H~ 36 (46)
T 2em6_A 11 KCYKCDVCGKEFSQ-SSHLQTHQRVHT 36 (46)
T ss_dssp CCCBCSSSCCBCSS-HHHHHHHHTTTS
T ss_pred CCeECCCCCcccCC-HHHHHHHHHHcC
Confidence 56899999999963 677888975433
No 65
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.38 E-value=66 Score=22.17 Aligned_cols=27 Identities=26% Similarity=0.486 Sum_probs=20.6
Q ss_pred CeeEcccCCCcccCchHHHHHHhhccCC
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLARIQG 109 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~~~~ 109 (836)
+..+|.+|++.|. .-+.|+.|+.--.|
T Consensus 11 k~~~C~~C~k~f~-~~~~L~~H~~~H~~ 37 (46)
T 2ep3_A 11 KPYRCAECGKAFT-DRSNLFTHQKIHTG 37 (46)
T ss_dssp CSEECSSSCCEES-SHHHHHHHHTTTTT
T ss_pred CCeECCCCCchhC-CHHHHHHHHHHcCC
Confidence 5689999999996 36778888754333
No 66
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.07 E-value=46 Score=23.10 Aligned_cols=23 Identities=30% Similarity=0.603 Sum_probs=17.8
Q ss_pred CeeEcccCCCcccCchHHHHHHhh
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLA 105 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~ 105 (836)
+..+|.+|++.|.- -+.|+.|+.
T Consensus 11 k~~~C~~C~k~F~~-~~~L~~H~~ 33 (46)
T 2eoo_A 11 RPYGCNECGKNFGR-HSHLIEHLK 33 (46)
T ss_dssp CCEECSSSCCEESS-HHHHHHHHH
T ss_pred CCEEccccCcccCC-HHHHHHHHH
Confidence 56899999999963 566777764
No 67
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.04 E-value=78 Score=21.81 Aligned_cols=27 Identities=26% Similarity=0.473 Sum_probs=20.7
Q ss_pred CeeEcccCCCcccCchHHHHHHhhccCC
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLARIQG 109 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~~~~ 109 (836)
+..+|.+|++.|. ..+.|+.|+..-.|
T Consensus 11 ~~~~C~~C~k~f~-~~~~L~~H~~~H~~ 37 (46)
T 2em5_A 11 KSHQCHECGRGFT-LKSHLNQHQRIHTG 37 (46)
T ss_dssp CSEECSSSCCEES-SHHHHHHHHTTTSC
T ss_pred CCeECCcCCCccC-CHHHHHHHHHHhCC
Confidence 5689999999996 36788889754333
No 68
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=24.95 E-value=79 Score=21.68 Aligned_cols=27 Identities=26% Similarity=0.418 Sum_probs=20.7
Q ss_pred CeeEcccCCCcccCchHHHHHHhhccCC
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLARIQG 109 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~~~~ 109 (836)
+..+|.+|++.|.- ...|+.|+..-.|
T Consensus 11 k~~~C~~C~k~f~~-~~~L~~H~~~H~~ 37 (46)
T 2em9_A 11 KPYNCKECGKSFRW-ASCLLKHQRVHSG 37 (46)
T ss_dssp CSEECSSSCCEESS-HHHHHHHGGGGTS
T ss_pred cCeECCccccccCC-hHHHHHHHHHhCC
Confidence 56899999999963 6788889764433
No 69
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.92 E-value=38 Score=23.64 Aligned_cols=24 Identities=29% Similarity=0.544 Sum_probs=18.3
Q ss_pred CeeEcccCCCcccCchHHHHHHhhc
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLAR 106 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~ 106 (836)
+..+|.+|++.|.- -..|+.|+.-
T Consensus 11 k~~~C~~C~k~F~~-~~~L~~H~~~ 34 (46)
T 2eom_A 11 RGHRCSDCGKFFLQ-ASNFIQHRRI 34 (46)
T ss_dssp SSCCCSSSCCCCSS-HHHHHHHHHH
T ss_pred CCcCCCCCCCeeCC-hHHHHHHHHH
Confidence 46799999999963 5677778653
No 70
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.84 E-value=56 Score=22.57 Aligned_cols=27 Identities=33% Similarity=0.577 Sum_probs=20.5
Q ss_pred CeeEcccCCCcccCchHHHHHHhhccCC
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLARIQG 109 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~~~~ 109 (836)
+..+|.+|++.|. .-..|+.|+..-.|
T Consensus 11 k~~~C~~C~k~f~-~~~~L~~H~~~H~~ 37 (46)
T 2eq1_A 11 KPYKCNECGKAFR-AHSNLTTHQVIHTG 37 (46)
T ss_dssp CCCCCTTTTCCCS-SHHHHHHHHTTTCC
T ss_pred CCeECCcCChhhC-CHHHHHHHHHHhCC
Confidence 5689999999996 36778889764333
No 71
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.80 E-value=80 Score=21.71 Aligned_cols=28 Identities=36% Similarity=0.565 Sum_probs=20.9
Q ss_pred cCeeEcccCCCcccCchHHHHHHhhccCC
Q 047254 81 KKKVKCNYCGKVVSGGINRFKQHLARIQG 109 (836)
Q Consensus 81 ~~~~~C~yC~~~~~ggi~r~k~HL~~~~~ 109 (836)
.+..+|.+|++.|.. -+.|+.|+..-.|
T Consensus 10 ~k~~~C~~C~k~f~~-~~~L~~H~~~H~~ 37 (46)
T 2ene_A 10 EKPYKCNECGKVFRH-NSYLSRHQRIHTG 37 (46)
T ss_dssp SSSEECSSSCCEESS-HHHHHHHHTTTCC
T ss_pred CCCeECCCCCchhCC-hHHHHHHHhhcCC
Confidence 356899999999963 6778889764433
No 72
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.75 E-value=65 Score=22.21 Aligned_cols=28 Identities=39% Similarity=0.642 Sum_probs=21.1
Q ss_pred cCeeEcccCCCcccCchHHHHHHhhccCC
Q 047254 81 KKKVKCNYCGKVVSGGINRFKQHLARIQG 109 (836)
Q Consensus 81 ~~~~~C~yC~~~~~ggi~r~k~HL~~~~~ 109 (836)
.+..+|.+|++.|.- -..|+.|+.--.|
T Consensus 10 ~k~~~C~~C~k~F~~-~~~L~~H~~~H~~ 37 (46)
T 2ytn_A 10 KKPYKCNECGKVFTQ-NSHLARHRGIHTG 37 (46)
T ss_dssp CSSCBCTTTCCBCSS-HHHHHHHGGGTSC
T ss_pred CcCeECCCCCCeeCC-HHHHHHHhhhcCC
Confidence 356899999999963 6788889764443
No 73
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.63 E-value=56 Score=22.19 Aligned_cols=25 Identities=28% Similarity=0.412 Sum_probs=19.5
Q ss_pred CeeEcccCCCcccCchHHHHHHhhcc
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLARI 107 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~~ 107 (836)
+..+|.+|++.|.. -..|+.|+..-
T Consensus 11 k~~~C~~C~k~f~~-~~~L~~H~~~H 35 (44)
T 2en7_A 11 KPYVCNECGKAFRS-KSYLIIHTRTH 35 (44)
T ss_dssp SSSCCTTTCCCCSS-HHHHHHHHTTT
T ss_pred cCeECCCCCCccCC-HHHHHHHhhhc
Confidence 46799999999963 67788887543
No 74
>1pg5_B Aspartate carbamoyltransferase regulatory chain; 2.60A {Sulfolobus acidocaldarius} SCOP: d.58.2.1 g.41.7.1 PDB: 2be9_B*
Probab=24.57 E-value=33 Score=32.49 Aligned_cols=35 Identities=20% Similarity=0.413 Sum_probs=22.3
Q ss_pred CCccccceeccCCcCeeEcccCCCccc-CchHHHHHHhh
Q 047254 68 DPGWEHGVAQDQRKKKVKCNYCGKVVS-GGINRFKQHLA 105 (836)
Q Consensus 68 d~~W~h~~~~~~~~~~~~C~yC~~~~~-ggi~r~k~HL~ 105 (836)
.|+ -.+...+......+|.||++.+. .-|. ++-|.
T Consensus 129 Epv-s~F~v~~~~~~~lrC~YCe~~~~~~~i~--~~~~~ 164 (168)
T 1pg5_B 129 EAI-PTFKTLTEKPLKMRCEYCETIIDENEIM--SQILG 164 (168)
T ss_dssp TSC-CEEEEEETTTTEEEETTTCCEEEHHHHH--HHHTC
T ss_pred ccc-cEEEEEcCCCCEEEeeCCCCEecHhHHh--HHhhc
Confidence 464 33334465567899999999995 3354 54443
No 75
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.46 E-value=77 Score=21.10 Aligned_cols=25 Identities=20% Similarity=0.353 Sum_probs=19.8
Q ss_pred CeeEcccCCCcccCchHHHHHHhhcc
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLARI 107 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~~ 107 (836)
+..+|.+|++.|. -...|+.|+.-.
T Consensus 9 k~~~C~~C~k~f~-~~~~L~~H~~~H 33 (41)
T 2ept_A 9 RVYECQECGKSFR-QKGSLTLHERIH 33 (41)
T ss_dssp CCEECSSSCCEES-SHHHHHHHGGGC
T ss_pred CCeECCCCCCCcC-CHHHHHHHHHHh
Confidence 5689999999996 367888897643
No 76
>2yww_A Aspartate carbamoyltransferase regulatory chain; ATP complex, structural genomics, NPPSFA; HET: ATP; 2.00A {Methanocaldococcus jannaschii}
Probab=24.27 E-value=21 Score=33.23 Aligned_cols=20 Identities=30% Similarity=0.718 Sum_probs=15.0
Q ss_pred cCCcCeeEcccCCCcccCch
Q 047254 78 DQRKKKVKCNYCGKVVSGGI 97 (836)
Q Consensus 78 ~~~~~~~~C~yC~~~~~ggi 97 (836)
+.+....+|.||++.+...|
T Consensus 128 ~~~~~~lrC~YCe~~~~~~~ 147 (149)
T 2yww_A 128 SKNPLKIRCYYCEKFLNEVI 147 (149)
T ss_dssp EETTEEEEETTTCCBCSSCC
T ss_pred eCCCCEEEeeCCCcChhhhc
Confidence 44456789999999986544
No 77
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=30.08 E-value=16 Score=22.43 Aligned_cols=22 Identities=14% Similarity=0.387 Sum_probs=15.3
Q ss_pred eeEcccCCCcccCchHHHHHHhh
Q 047254 83 KVKCNYCGKVVSGGINRFKQHLA 105 (836)
Q Consensus 83 ~~~C~yC~~~~~ggi~r~k~HL~ 105 (836)
..+|.+|++.|.. ...|+.|..
T Consensus 3 ~~~C~~C~k~f~~-~~~l~~H~~ 24 (30)
T 2lvr_A 3 PYVCIHCQRQFAD-PGALQRHVR 24 (30)
Confidence 4689999999952 345666653
No 78
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.21 E-value=48 Score=23.01 Aligned_cols=24 Identities=38% Similarity=0.602 Sum_probs=18.8
Q ss_pred CeeEcccCCCcccCchHHHHHHhhc
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLAR 106 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~ 106 (836)
+..+|.+|++.|. --..|+.|+.-
T Consensus 11 k~~~C~~C~k~f~-~~~~L~~H~~~ 34 (46)
T 2eoz_A 11 KPYSCNVCGKAFV-LSAHLNQHLRV 34 (46)
T ss_dssp CSEEETTTTEEES-SHHHHHHHHHH
T ss_pred CCeECcccChhhC-CHHHHHHHHHH
Confidence 5689999999996 36777888654
No 79
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.04 E-value=83 Score=21.57 Aligned_cols=27 Identities=30% Similarity=0.495 Sum_probs=20.7
Q ss_pred CeeEcccCCCcccCchHHHHHHhhccCC
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLARIQG 109 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~~~~ 109 (836)
+..+|.+|++.|. -...|+.|+..-.|
T Consensus 11 ~~~~C~~C~k~f~-~~~~L~~H~~~H~~ 37 (46)
T 2en8_A 11 KSHTCDECGKNFC-YISALRIHQRVHMG 37 (46)
T ss_dssp SSEECTTTCCEES-SHHHHHHHHTTTCC
T ss_pred CCeECCCcCcccC-CHHHHHHHHHHhCC
Confidence 5689999999996 36788889754433
No 80
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.92 E-value=44 Score=23.21 Aligned_cols=24 Identities=38% Similarity=0.463 Sum_probs=19.0
Q ss_pred CeeEcccCCCcccCchHHHHHHhhc
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLAR 106 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~ 106 (836)
+..+|..|++.|.- ...|+.|+.-
T Consensus 11 k~~~C~~C~k~f~~-~~~L~~H~~~ 34 (46)
T 2eoy_A 11 KCFKCNKCEKTFSC-SKYLTQHERI 34 (46)
T ss_dssp CCEECSSSCCEESS-SHHHHHHHTT
T ss_pred CCEECcCCCCcCCC-HHHHHHHHHH
Confidence 46899999999963 5778888753
No 81
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.89 E-value=43 Score=23.20 Aligned_cols=23 Identities=30% Similarity=0.470 Sum_probs=17.1
Q ss_pred CeeEcccCCCcccCchHHHHHHhh
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLA 105 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~ 105 (836)
+..+|.+|++.|.- -..|+.|+.
T Consensus 11 k~~~C~~C~k~F~~-~~~L~~H~~ 33 (46)
T 2en3_A 11 KPFQCKECGMNFSW-SCSLFKHLR 33 (46)
T ss_dssp CSEECSSSCCEESS-SHHHHHHHH
T ss_pred CCeeCcccChhhCC-HHHHHHHHH
Confidence 56899999999953 456677764
No 82
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.88 E-value=71 Score=21.94 Aligned_cols=27 Identities=30% Similarity=0.397 Sum_probs=20.4
Q ss_pred CeeEcccCCCcccCchHHHHHHhhccCC
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLARIQG 109 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~~~~ 109 (836)
+..+|.+|++.|. --..|+.|+..-.|
T Consensus 11 ~~~~C~~C~k~f~-~~~~L~~H~~~H~~ 37 (46)
T 2eop_A 11 KPHECRECGKSFS-FNSQLIVHQRIHTG 37 (46)
T ss_dssp CSCBCTTTCCBCS-SHHHHHHHHTTTTT
T ss_pred CCeeCCCCCchhC-CHHHHHHHHHHcCC
Confidence 4689999999996 36778888764433
No 83
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.87 E-value=59 Score=22.39 Aligned_cols=26 Identities=35% Similarity=0.548 Sum_probs=19.4
Q ss_pred cCeeEcccCCCcccCchHHHHHHhhcc
Q 047254 81 KKKVKCNYCGKVVSGGINRFKQHLARI 107 (836)
Q Consensus 81 ~~~~~C~yC~~~~~ggi~r~k~HL~~~ 107 (836)
.+..+|.+|++.|.- -+.|+.|+..-
T Consensus 10 ~k~~~C~~C~k~f~~-~~~L~~H~~~H 35 (46)
T 2eow_A 10 EKPYKCNECGKAFRA-RSSLAIHQATH 35 (46)
T ss_dssp CCCEECTTSCCEESS-HHHHHHHHHHH
T ss_pred CCCeeccccCChhcC-HHHHHHHHHHc
Confidence 356899999999963 56778887543
No 84
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=23.83 E-value=86 Score=21.46 Aligned_cols=27 Identities=26% Similarity=0.383 Sum_probs=20.6
Q ss_pred CeeEcccCCCcccCchHHHHHHhhccCC
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLARIQG 109 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~~~~ 109 (836)
+..+|.+|++.|. --..|+.|+..-.|
T Consensus 11 k~~~C~~C~k~f~-~~~~L~~H~~~H~~ 37 (46)
T 2el4_A 11 KPYGCSQCAKTFS-LKSQLIVHQRSHTG 37 (46)
T ss_dssp CSEECSSSSCEES-SHHHHHHHGGGSSS
T ss_pred CceECCCCCchhC-CHHHHHHHHHHhCC
Confidence 5689999999996 36778889764433
No 85
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.75 E-value=64 Score=22.36 Aligned_cols=25 Identities=32% Similarity=0.501 Sum_probs=19.8
Q ss_pred CeeEcccCCCcccCchHHHHHHhhcc
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLARI 107 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~~ 107 (836)
+..+|..|++.|. --..|+.|+..-
T Consensus 11 k~~~C~~C~k~f~-~~~~L~~H~~~H 35 (46)
T 2eon_A 11 KPYKCQVCGKAFR-VSSHLVQHHSVH 35 (46)
T ss_dssp CSCBCSSSCCBCS-SHHHHHHHTTTT
T ss_pred cccCCCCCCcccC-cHHHHHHHHHhc
Confidence 4679999999996 367888897543
No 86
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=23.58 E-value=47 Score=20.12 Aligned_cols=20 Identities=15% Similarity=0.492 Sum_probs=15.6
Q ss_pred eEcccCCCcccCchHHHHHHh
Q 047254 84 VKCNYCGKVVSGGINRFKQHL 104 (836)
Q Consensus 84 ~~C~yC~~~~~ggi~r~k~HL 104 (836)
.+|..|++.|. .-+.|+.|+
T Consensus 3 ~~C~~C~k~f~-~~~~l~~H~ 22 (30)
T 1paa_A 3 YACGLCNRAFT-RRDLLIRHA 22 (30)
T ss_dssp SBCTTTCCBCS-SSHHHHHHH
T ss_pred cCCcccCcccC-ChHHHHHHH
Confidence 57999999996 356788884
No 87
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.51 E-value=61 Score=22.04 Aligned_cols=26 Identities=27% Similarity=0.478 Sum_probs=19.9
Q ss_pred CeeEcccCCCcccCchHHHHHHhhccC
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLARIQ 108 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~~~ 108 (836)
+..+|.+|++.|.- -+.|+.|+..-.
T Consensus 11 k~~~C~~C~k~f~~-~~~L~~H~~~H~ 36 (44)
T 2eoj_A 11 NPYECCECGKVFSR-KDQLVSHQKTHS 36 (44)
T ss_dssp CSCEETTTTEECSS-HHHHHHHHTTSS
T ss_pred cCeeCCCCCCccCC-HHHHHHHHHHcC
Confidence 46899999999963 677888876433
No 88
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.46 E-value=60 Score=22.44 Aligned_cols=25 Identities=20% Similarity=0.392 Sum_probs=18.8
Q ss_pred cCeeEcccCCCcccCchHHHHHHhhc
Q 047254 81 KKKVKCNYCGKVVSGGINRFKQHLAR 106 (836)
Q Consensus 81 ~~~~~C~yC~~~~~ggi~r~k~HL~~ 106 (836)
.+..+|.+|++.|.- -..|+.|+..
T Consensus 10 ~k~~~C~~C~k~f~~-~~~L~~H~~~ 34 (46)
T 2em4_A 10 QRPYECIECGKAFKT-KSSLICHRRS 34 (46)
T ss_dssp SSSEECSSSCCEESS-HHHHHHHHHH
T ss_pred CcCcCCCCCCCccCC-HHHHHHHHHh
Confidence 356899999999963 5667778653
No 89
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=23.44 E-value=75 Score=21.85 Aligned_cols=28 Identities=43% Similarity=0.693 Sum_probs=20.5
Q ss_pred cCeeEcccCCCcccCchHHHHHHhhccCC
Q 047254 81 KKKVKCNYCGKVVSGGINRFKQHLARIQG 109 (836)
Q Consensus 81 ~~~~~C~yC~~~~~ggi~r~k~HL~~~~~ 109 (836)
.+..+|.+|++.|. --..|+.|+.--.|
T Consensus 10 ~k~~~C~~C~k~f~-~~~~L~~H~~~H~~ 37 (46)
T 2ema_A 10 EKRYKCNECGKVFS-RNSQLSQHQKIHTG 37 (46)
T ss_dssp SCCEECSSSCCEES-SHHHHHHHHTGGGC
T ss_pred CcCcCCCCCcchhC-CHHHHHHHHHhcCC
Confidence 35689999999996 36778888754333
No 90
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.42 E-value=55 Score=22.60 Aligned_cols=27 Identities=37% Similarity=0.626 Sum_probs=20.3
Q ss_pred CeeEcccCCCcccCchHHHHHHhhccCC
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLARIQG 109 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~~~~ 109 (836)
+..+|.+|++.|. .-..|+.|+.--.|
T Consensus 11 k~~~C~~C~k~F~-~~~~L~~H~~~H~~ 37 (46)
T 2yti_A 11 KPYKCNECGKVFT-QNSHLARHRGIHTG 37 (46)
T ss_dssp CTTCCSSSCCCCS-SHHHHHHHHTTTSC
T ss_pred cCeECCCCCcccC-ChhHHHHHhHhcCC
Confidence 4579999999996 36778889754433
No 91
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.25 E-value=61 Score=22.40 Aligned_cols=25 Identities=28% Similarity=0.440 Sum_probs=19.2
Q ss_pred CeeEcccCCCcccCchHHHHHHhhcc
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLARI 107 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~~ 107 (836)
+..+|.+|++.|.- ...|+.|+.--
T Consensus 11 k~~~C~~C~k~f~~-~~~L~~H~~~H 35 (46)
T 2eoh_A 11 KPYECKECRKTFIQ-IGHLNQHKRVH 35 (46)
T ss_dssp CSCCCSSSCCCCSS-HHHHHHHHHHC
T ss_pred CCcCCCCcCchhCC-HHHHHHHHHHh
Confidence 46799999999963 67788887543
No 92
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=23.23 E-value=55 Score=21.45 Aligned_cols=24 Identities=38% Similarity=0.743 Sum_probs=17.8
Q ss_pred cCeeEccc--CCCcccCchHHHHHHhh
Q 047254 81 KKKVKCNY--CGKVVSGGINRFKQHLA 105 (836)
Q Consensus 81 ~~~~~C~y--C~~~~~ggi~r~k~HL~ 105 (836)
.+..+|.+ |++.|. .-+.|+.|+.
T Consensus 6 ~k~~~C~~~~C~k~f~-~~~~L~~H~~ 31 (37)
T 1va1_A 6 KKQHICHIQGCGKVYG-KTSHLRAHLR 31 (37)
T ss_dssp CCCEECCSTTCCCEES-CHHHHHHHHH
T ss_pred CCCCCCCCCCCCCccC-CHHHHHHHHH
Confidence 35689997 999996 3566777764
No 93
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.16 E-value=66 Score=22.18 Aligned_cols=27 Identities=33% Similarity=0.465 Sum_probs=20.7
Q ss_pred CeeEcccCCCcccCchHHHHHHhhccCC
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLARIQG 109 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~~~~ 109 (836)
+..+|.+|++.|. --..|+.|+..-.+
T Consensus 11 k~~~C~~C~k~f~-~~~~L~~H~~~H~~ 37 (46)
T 2epz_A 11 KPFDCIDCGKAFS-DHIGLNQHRRIHTG 37 (46)
T ss_dssp CSBCCTTTCCCBS-SHHHHHHHHTTTTT
T ss_pred CCeECCCCCceeC-CHHHHHHHHHHhCC
Confidence 4689999999996 36788889764333
No 94
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.07 E-value=63 Score=22.30 Aligned_cols=25 Identities=24% Similarity=0.452 Sum_probs=19.0
Q ss_pred CeeEcccCCCcccCchHHHHHHhhcc
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLARI 107 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~~ 107 (836)
+..+|.+|++.|.- -..|+.|+..-
T Consensus 11 ~~~~C~~C~k~F~~-~~~L~~H~~~H 35 (46)
T 2em3_A 11 KPYECKVCSKAFTQ-KAHLAQHQKTH 35 (46)
T ss_dssp CSEECSSSCCEESS-HHHHHHHHHHH
T ss_pred cCeECCCCCcccCC-HHHHHHHHHHh
Confidence 56899999999963 56777786543
No 95
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.98 E-value=88 Score=21.45 Aligned_cols=27 Identities=22% Similarity=0.282 Sum_probs=20.6
Q ss_pred cCeeEcccCCCcccCchHHHHHHhhccC
Q 047254 81 KKKVKCNYCGKVVSGGINRFKQHLARIQ 108 (836)
Q Consensus 81 ~~~~~C~yC~~~~~ggi~r~k~HL~~~~ 108 (836)
.+..+|.+|++.|.- -..|+.|+....
T Consensus 10 ~~~~~C~~C~k~f~~-~~~L~~H~~~H~ 36 (46)
T 2ep0_A 10 EKPYKCDVCHKSFRY-GSSLTVHQRIHT 36 (46)
T ss_dssp CCSEECSSSCCEESS-HHHHHHHHTTTS
T ss_pred CCCeeCcccCcccCC-hHHHHHHHHHhC
Confidence 356899999999963 678888976433
No 96
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=22.87 E-value=51 Score=23.96 Aligned_cols=23 Identities=22% Similarity=0.557 Sum_probs=17.8
Q ss_pred CeeEcccCCCcccCchHHHHHHhh
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLA 105 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~ 105 (836)
...+|..|++.|.. -+.|+.|+.
T Consensus 23 k~~~C~~C~k~f~~-~~~L~~H~~ 45 (54)
T 1yui_A 23 QPATCPICYAVIRQ-SRNLRRHLE 45 (54)
T ss_dssp CCEECTTTCCEESS-HHHHHHHHH
T ss_pred CCccCCCCCcccCC-HHHHHHHHH
Confidence 56899999999963 566777764
No 97
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.72 E-value=73 Score=21.88 Aligned_cols=25 Identities=32% Similarity=0.452 Sum_probs=19.0
Q ss_pred CeeEcccCCCcccCchHHHHHHhhcc
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLARI 107 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~~ 107 (836)
+..+|.+|++.|.. -+.|+.|+..-
T Consensus 11 k~~~C~~C~k~f~~-~~~L~~H~~~H 35 (46)
T 2emm_A 11 RPHKCNECGKSFIQ-SAHLIQHQRIH 35 (46)
T ss_dssp CSEECSSSCCEESS-HHHHHHHHHHH
T ss_pred CCeeCCCCChhhCC-HHHHHHHHHHh
Confidence 56899999999963 56778886543
No 98
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.67 E-value=65 Score=22.14 Aligned_cols=26 Identities=31% Similarity=0.489 Sum_probs=19.5
Q ss_pred CeeEcccCCCcccCchHHHHHHhhccC
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLARIQ 108 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~~~ 108 (836)
+..+|.+|++.|. ....|+.|+..-.
T Consensus 11 ~~~~C~~C~k~f~-~~~~L~~H~~~H~ 36 (46)
T 2eov_A 11 KPYKCSDCGKSFT-WKSRLRIHQKCHT 36 (46)
T ss_dssp CSCBCSSSCCBCS-SHHHHHHHHHHHS
T ss_pred CCccCCccChhhC-CHHHHHHHHHhcC
Confidence 4689999999996 3677888875433
No 99
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.57 E-value=63 Score=22.01 Aligned_cols=24 Identities=25% Similarity=0.412 Sum_probs=18.7
Q ss_pred CeeEcccCCCcccCchHHHHHHhhc
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLAR 106 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~ 106 (836)
+..+|.+|++.|.. .+.|+.|+..
T Consensus 9 k~~~C~~C~k~f~~-~~~L~~H~~~ 32 (44)
T 2emx_A 9 KPFGCSCCEKAFSS-KSYLLVHQQT 32 (44)
T ss_dssp CCEECSSSSCEESS-HHHHHHHHHH
T ss_pred cCccCCCCCcccCC-HHHHHHHHHH
Confidence 56899999999963 6677778654
No 100
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.52 E-value=47 Score=23.00 Aligned_cols=24 Identities=38% Similarity=0.678 Sum_probs=18.3
Q ss_pred cCeeEcccCCCcccCchHHHHHHhh
Q 047254 81 KKKVKCNYCGKVVSGGINRFKQHLA 105 (836)
Q Consensus 81 ~~~~~C~yC~~~~~ggi~r~k~HL~ 105 (836)
.+..+|.+|++.|.. -..|+.|+.
T Consensus 10 ~k~~~C~~C~k~f~~-~~~L~~H~~ 33 (46)
T 2yu8_A 10 EKPYKCNECGKVFTQ-NSHLARHRR 33 (46)
T ss_dssp CSSEECSSSCCEESS-SHHHHHHTH
T ss_pred CCCeECCcCCchhCC-HHHHHHHHH
Confidence 356899999999953 566777764
No 101
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.52 E-value=76 Score=21.81 Aligned_cols=27 Identities=22% Similarity=0.309 Sum_probs=20.1
Q ss_pred CeeEcccCCCcccCchHHHHHHhhccCC
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLARIQG 109 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~~~~ 109 (836)
+..+|.+|++.|. .-..|+.|+..-.|
T Consensus 11 k~~~C~~C~k~f~-~~~~L~~H~~~H~~ 37 (46)
T 2ytj_A 11 KPYICAECGKAFT-IRSNLIKHQKIHTK 37 (46)
T ss_dssp CSEECSSSCCEES-SHHHHHHHHHHTSC
T ss_pred cCeECCCCChhhC-CHHHHHHHHHHcCC
Confidence 5689999999996 36778888754333
No 102
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.27 E-value=83 Score=21.61 Aligned_cols=28 Identities=25% Similarity=0.525 Sum_probs=20.8
Q ss_pred cCeeEcccCCCcccCchHHHHHHhhccCC
Q 047254 81 KKKVKCNYCGKVVSGGINRFKQHLARIQG 109 (836)
Q Consensus 81 ~~~~~C~yC~~~~~ggi~r~k~HL~~~~~ 109 (836)
.+..+|.+|++.|. .-..|+.|+..-.|
T Consensus 10 ~k~~~C~~C~k~f~-~~~~L~~H~~~H~~ 37 (46)
T 2ep2_A 10 EKPYECSICGKSFT-KKSQLHVHQQIHTG 37 (46)
T ss_dssp CCSEECSSSCCEES-SHHHHHHHHHTTSS
T ss_pred CcCcCCCCCCcccC-CHHHHHHHHHHhCC
Confidence 35689999999996 36778888764433
No 103
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=22.19 E-value=64 Score=22.31 Aligned_cols=24 Identities=29% Similarity=0.474 Sum_probs=18.6
Q ss_pred CeeEcccCCCcccCchHHHHHHhhc
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLAR 106 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~ 106 (836)
+..+|.+|++.|. --..|+.|+.-
T Consensus 11 k~~~C~~C~k~F~-~~~~L~~H~~~ 34 (46)
T 2emj_A 11 KPFECAECGKSFS-ISSQLATHQRI 34 (46)
T ss_dssp CSEECSSSSCEES-SHHHHHHHHHH
T ss_pred CCEECCCCCcccC-CHHHHHHHHHH
Confidence 5689999999996 35677778653
No 104
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.07 E-value=66 Score=22.21 Aligned_cols=24 Identities=29% Similarity=0.540 Sum_probs=18.7
Q ss_pred CeeEcccCCCcccCchHHHHHHhhc
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLAR 106 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~ 106 (836)
+..+|.+|++.|.- ...|+.|+.-
T Consensus 11 k~~~C~~C~k~f~~-~~~L~~H~~~ 34 (46)
T 2yto_A 11 KPYKCSDCGKAFTR-KSGLHIHQQS 34 (46)
T ss_dssp CCEECSSSCCEESS-HHHHHHHHHH
T ss_pred CCEECcccCCccCC-HhHHHHHHHH
Confidence 56899999999963 5677778654
No 105
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=27.53 E-value=19 Score=22.01 Aligned_cols=21 Identities=24% Similarity=0.626 Sum_probs=14.8
Q ss_pred eEcccCCCcccCchHHHHHHhh
Q 047254 84 VKCNYCGKVVSGGINRFKQHLA 105 (836)
Q Consensus 84 ~~C~yC~~~~~ggi~r~k~HL~ 105 (836)
.+|.+|++.|.. .+.|+.|+.
T Consensus 3 ~~C~~C~k~f~~-~~~l~~H~~ 23 (29)
T 2lvt_A 3 CQCVMCGKAFTQ-ASSLIAHVR 23 (29)
Confidence 589999999942 345666653
No 106
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.89 E-value=99 Score=21.17 Aligned_cols=27 Identities=30% Similarity=0.396 Sum_probs=20.6
Q ss_pred CeeEcccCCCcccCchHHHHHHhhccCC
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLARIQG 109 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~~~~ 109 (836)
+..+|..|++.|.- ...|+.|+..-.+
T Consensus 11 k~~~C~~C~k~f~~-~~~L~~H~~~H~~ 37 (46)
T 2em7_A 11 KPYKCEECGKGFIC-RRDLYTHHMVHTG 37 (46)
T ss_dssp CSEECSSSCCEESC-HHHHHHHGGGGTT
T ss_pred cCccCCCccchhCC-HHHHHHHHHHhCC
Confidence 56899999999963 6778889764433
No 107
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.88 E-value=46 Score=23.08 Aligned_cols=23 Identities=35% Similarity=0.647 Sum_probs=17.3
Q ss_pred CeeEcccCCCcccCchHHHHHHhh
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLA 105 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~ 105 (836)
+..+|.+|++.|.- ...|+.|+.
T Consensus 11 k~~~C~~C~k~f~~-~~~L~~H~~ 33 (46)
T 2emz_A 11 RPFKCNECGKGFGR-RSHLAGHLR 33 (46)
T ss_dssp CSCCCSSSCCCCSS-HHHHHHHHH
T ss_pred CCeECCCCCcccCC-HHHHHHHHH
Confidence 46799999999953 556777764
No 108
>4fyy_B Aspartate carbamoyltransferase regulatory chain; pyrimidine nucleotide biosynthesis, feedback inhibition, all transferase; HET: UTP CTP; 1.94A {Escherichia coli} PDB: 1ezz_B 1f1b_B* 1i5o_B* 1q95_G* 1r0b_G* 1r0c_B* 1raa_B* 1rab_B* 1rac_B* 1rad_B* 1rae_B* 1raf_B* 1rag_B* 1rah_B* 1rai_B* 1sku_B 1tth_B* 1tu0_B 1tug_B* 1xjw_B* ...
Probab=21.83 E-value=30 Score=32.48 Aligned_cols=16 Identities=38% Similarity=0.781 Sum_probs=12.7
Q ss_pred CCcCeeEcccCCCccc
Q 047254 79 QRKKKVKCNYCGKVVS 94 (836)
Q Consensus 79 ~~~~~~~C~yC~~~~~ 94 (836)
++....||.||.+.++
T Consensus 131 ~~~~~~rC~YCe~~~~ 146 (153)
T 4fyy_B 131 ANDIALKCKYCEKEFS 146 (153)
T ss_dssp SSSEEEEETTTCCEEE
T ss_pred CCCCEEEeeCCCCEec
Confidence 3455789999999884
No 109
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.79 E-value=71 Score=22.04 Aligned_cols=27 Identities=30% Similarity=0.476 Sum_probs=20.1
Q ss_pred CeeEcccCCCcccCchHHHHHHhhccCC
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLARIQG 109 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~~~~ 109 (836)
+..+|.+|++.|.- -..|+.|+..-.+
T Consensus 11 k~~~C~~C~k~F~~-~~~L~~H~~~H~~ 37 (46)
T 2enh_A 11 KPYECDVCRKAFSH-HASLTQHQRVHSG 37 (46)
T ss_dssp SSCBCTTTCCBCSS-SHHHHHHGGGSCC
T ss_pred CCcCCCCcCchhCC-HHHHHHHHHHhCC
Confidence 46899999999963 5678888764433
No 110
>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A
Probab=21.61 E-value=51 Score=22.14 Aligned_cols=24 Identities=25% Similarity=0.596 Sum_probs=16.5
Q ss_pred cCeeEcccCCCcccCchHHHHHHhh
Q 047254 81 KKKVKCNYCGKVVSGGINRFKQHLA 105 (836)
Q Consensus 81 ~~~~~C~yC~~~~~ggi~r~k~HL~ 105 (836)
+.+-.|.||.|.++. +..+-.|+.
T Consensus 7 kikqhcrfckkkysd-vknlikhir 30 (37)
T 2elu_A 7 GIKQHCRFCKKKYSD-VKNLIKHIR 30 (37)
T ss_dssp CCCCEETTTTEECSS-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 445689999999975 444444653
No 111
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.42 E-value=71 Score=22.05 Aligned_cols=24 Identities=33% Similarity=0.551 Sum_probs=18.4
Q ss_pred CeeEcccCCCcccCchHHHHHHhhc
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLAR 106 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~ 106 (836)
+..+|.+|++.|.- -..|+.|+..
T Consensus 11 k~~~C~~C~k~f~~-~~~L~~H~~~ 34 (46)
T 2em2_A 11 KPFKCKECGKAFRQ-NIHLASHLRI 34 (46)
T ss_dssp CSEECSSSCCEESS-HHHHHHHHHH
T ss_pred CCEECCcCCchhCC-HHHHHHHHHH
Confidence 56899999999953 5667778654
No 112
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=21.36 E-value=69 Score=25.41 Aligned_cols=23 Identities=22% Similarity=0.443 Sum_probs=15.7
Q ss_pred CeeEcccCCCcccCchHHHHHHhh
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLA 105 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~ 105 (836)
+..+|.+|++.|.- ...|+.|+.
T Consensus 14 k~~~C~~C~~~f~~-~~~l~~H~~ 36 (86)
T 1x6h_A 14 KPYACSHCDKTFRQ-KQLLDMHFK 36 (86)
T ss_dssp CCEECSSSSCEESS-HHHHHHHHH
T ss_pred CCCcCCCCCCccCC-HHHHHHHHH
Confidence 45788888888853 456777764
No 113
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.35 E-value=73 Score=21.92 Aligned_cols=28 Identities=32% Similarity=0.506 Sum_probs=20.8
Q ss_pred cCeeEcccCCCcccCchHHHHHHhhccCC
Q 047254 81 KKKVKCNYCGKVVSGGINRFKQHLARIQG 109 (836)
Q Consensus 81 ~~~~~C~yC~~~~~ggi~r~k~HL~~~~~ 109 (836)
.+..+|.+|++.|.- -+.|+.|+..-.|
T Consensus 10 ~~~~~C~~C~k~f~~-~~~L~~H~~~H~~ 37 (46)
T 2ytg_A 10 EKPFKCGECGKSYNQ-RVHLTQHQRVHTG 37 (46)
T ss_dssp CCSEECTTTCCEESS-SHHHHTTGGGGSS
T ss_pred CCCeECCCCCcccCC-HHHHHHHHHHcCC
Confidence 356899999999963 5778888764433
No 114
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.32 E-value=64 Score=22.01 Aligned_cols=25 Identities=24% Similarity=0.323 Sum_probs=18.7
Q ss_pred CeeEcccCCCcccCchHHHHHHhhcc
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLARI 107 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~~ 107 (836)
+..+|.+|++.|.- ...|+.|+..-
T Consensus 9 k~~~C~~C~k~f~~-~~~L~~H~~~H 33 (43)
T 2yrm_A 9 GAFFCNECDCRFSE-EASLKRHTLQT 33 (43)
T ss_dssp CCBCCSSSCCCBSS-HHHHHHHHHHH
T ss_pred CCEECCCCCCeeCC-hHHHHHHHHhh
Confidence 46899999999963 56677786543
No 115
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.12 E-value=81 Score=21.71 Aligned_cols=27 Identities=26% Similarity=0.513 Sum_probs=20.2
Q ss_pred CeeEcccCCCcccCchHHHHHHhhccCC
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLARIQG 109 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~~~~ 109 (836)
+..+|.+|++.|. -...|+.|+..-.|
T Consensus 11 k~~~C~~C~k~f~-~~~~L~~H~~~H~~ 37 (46)
T 2yth_A 11 KPFQCEECGKRFT-QNSHLHSHQRVHTG 37 (46)
T ss_dssp SSBCCSSSCCCBS-SHHHHHHHGGGGTT
T ss_pred cCCCCCCCCcccC-CHHHHHHHHHhcCC
Confidence 5689999999996 36778888754333
No 116
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.95 E-value=71 Score=21.97 Aligned_cols=27 Identities=33% Similarity=0.625 Sum_probs=20.2
Q ss_pred CeeEcccCCCcccCchHHHHHHhhccCC
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLARIQG 109 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~~~~ 109 (836)
+..+|.+|++.|. .-..|+.|+.--.|
T Consensus 11 k~~~C~~C~k~f~-~~~~L~~H~~~H~~ 37 (46)
T 2eq2_A 11 KPYQCNECGKAFS-QTSKLARHQRVHTG 37 (46)
T ss_dssp CSSSCCSSCCCCS-SHHHHHHHGGGGCC
T ss_pred CCeECCCCCcccC-CHHHHHHHHHHcCC
Confidence 4679999999996 36778888754333
No 117
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.73 E-value=91 Score=21.38 Aligned_cols=28 Identities=29% Similarity=0.446 Sum_probs=21.0
Q ss_pred cCeeEcccCCCcccCchHHHHHHhhccCC
Q 047254 81 KKKVKCNYCGKVVSGGINRFKQHLARIQG 109 (836)
Q Consensus 81 ~~~~~C~yC~~~~~ggi~r~k~HL~~~~~ 109 (836)
.+..+|..|++.|.- ...|+.|+.--.+
T Consensus 10 ~k~~~C~~C~k~f~~-~~~L~~H~~~H~~ 37 (46)
T 2ysp_A 10 EKPYKCEKCGKGYNS-KFNLDMHQKVHTG 37 (46)
T ss_dssp CCSEEETTTTEEESC-HHHHHHHHTTSCS
T ss_pred CCCeECCCCCCccCC-HHHHHHHHHhhCC
Confidence 356899999999963 6778889764433
No 118
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=20.71 E-value=1.1e+02 Score=21.04 Aligned_cols=27 Identities=30% Similarity=0.393 Sum_probs=20.3
Q ss_pred CeeEcccCCCcccCchHHHHHHhhccCC
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLARIQG 109 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~~~~ 109 (836)
+..+|.+|++.|.. -..|+.|+..-.+
T Consensus 11 k~~~C~~C~k~f~~-~~~L~~H~~~H~~ 37 (46)
T 2el6_A 11 NPYKCSQCEKSFSG-KLRLLVHQRMHTR 37 (46)
T ss_dssp CSEECSSSSCEESS-HHHHHHHHGGGCC
T ss_pred CCeECCCCCcccCC-HHHHHHHHHHcCC
Confidence 56899999999963 5778888764433
No 119
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=20.70 E-value=94 Score=21.69 Aligned_cols=28 Identities=29% Similarity=0.717 Sum_probs=21.2
Q ss_pred cCeeEcccCCCcccCchHHHHHHhhccCC
Q 047254 81 KKKVKCNYCGKVVSGGINRFKQHLARIQG 109 (836)
Q Consensus 81 ~~~~~C~yC~~~~~ggi~r~k~HL~~~~~ 109 (836)
.+..+|.+|++.|. -...|+.|+.-..+
T Consensus 10 ~k~~~C~~C~k~f~-~~~~L~~H~~~H~~ 37 (48)
T 2epr_A 10 RKQVACEICGKIFR-DVYHLNRHKLSHSG 37 (48)
T ss_dssp CCSEEETTTTEEES-SHHHHHHHGGGSCS
T ss_pred CcCeeCCCCCcccC-CHHHHHHHHHhcCC
Confidence 45689999999996 36778889764433
No 120
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.65 E-value=63 Score=22.32 Aligned_cols=25 Identities=28% Similarity=0.400 Sum_probs=19.0
Q ss_pred CeeEcccCCCcccCchHHHHHHhhcc
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLARI 107 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~~ 107 (836)
+..+|.+|++.|. --..|+.|+.--
T Consensus 11 k~~~C~~C~k~F~-~~~~L~~H~~~H 35 (46)
T 2en9_A 11 KLFKCNECKKTFT-QSSSLTVHQRIH 35 (46)
T ss_dssp CCCBCTTTCCBCS-SHHHHHHHHHHH
T ss_pred CCEECCccCcccC-CHHHHHHHHHHc
Confidence 5689999999996 356778886543
No 121
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.55 E-value=46 Score=23.17 Aligned_cols=24 Identities=33% Similarity=0.484 Sum_probs=18.3
Q ss_pred CeeEcccCCCcccCchHHHHHHhhc
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLAR 106 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~ 106 (836)
+..+|.+|++.|. -...|+.|+..
T Consensus 11 k~~~C~~C~k~f~-~~~~L~~H~~~ 34 (46)
T 2ytm_A 11 KPYKCMECGKAFG-DNSSCTQHQRL 34 (46)
T ss_dssp CSSSBTTTTBCCS-SHHHHHHHHHH
T ss_pred CCcCCCCCCchhC-CHHHHHHHHHH
Confidence 4579999999996 35677778653
No 122
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.55 E-value=45 Score=23.16 Aligned_cols=23 Identities=43% Similarity=0.764 Sum_probs=17.7
Q ss_pred CeeEcccCCCcccCchHHHHHHhh
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLA 105 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~ 105 (836)
+..+|.+|++.|.- -+.|+.|+.
T Consensus 11 k~~~C~~C~k~f~~-~~~L~~H~~ 33 (46)
T 2ytt_A 11 KPYQCSECGKSFSG-SYRLTQHWI 33 (46)
T ss_dssp CTTCCSSSCCCCSS-HHHHHHHHT
T ss_pred CCeeCCCCCcccCC-HHHHHHHHH
Confidence 45799999999963 567777764
No 123
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=20.53 E-value=85 Score=24.17 Aligned_cols=38 Identities=26% Similarity=0.401 Sum_probs=25.0
Q ss_pred cCeeEcccCCCcccCchHHHHHHhhccCC-CcccCCCCCH
Q 047254 81 KKKVKCNYCGKVVSGGINRFKQHLARIQG-EVAPCKDAPE 119 (836)
Q Consensus 81 ~~~~~C~yC~~~~~ggi~r~k~HL~~~~~-~v~~C~~vp~ 119 (836)
.+..+|.+|++.|.- ...|+.|+.-..+ ..-.|+.++.
T Consensus 12 ~k~~~C~~C~k~f~~-~~~L~~H~~~h~~~~~~~C~~C~~ 50 (72)
T 1x6e_A 12 EKPYGCVECGKAFSR-SSILVQHQRVHTGEKPYKCLECGK 50 (72)
T ss_dssp CCCEECSSSCCEESS-HHHHHHHHHGGGCSCCEECSSSCC
T ss_pred CCCccCCCCCCccCC-HHHHHHHHHhcCCCCCeECCCCCc
Confidence 356899999999963 5678888754433 2335665543
No 124
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.46 E-value=96 Score=21.31 Aligned_cols=27 Identities=30% Similarity=0.517 Sum_probs=20.6
Q ss_pred CeeEcccCCCcccCchHHHHHHhhccCC
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLARIQG 109 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~~~~ 109 (836)
+..+|.+|++.|. --+.|+.|+..-.+
T Consensus 11 k~~~C~~C~k~f~-~~~~L~~H~~~H~~ 37 (46)
T 2ytq_A 11 KPYGCSECGKAFS-SKSYLIIHMRTHSG 37 (46)
T ss_dssp CSCBCSSSCCBCS-CHHHHHHHHTTTCC
T ss_pred CCcCCCccChhhC-ChHHHHHHHHHhCC
Confidence 4689999999996 36788889764433
No 125
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.43 E-value=88 Score=21.47 Aligned_cols=25 Identities=24% Similarity=0.480 Sum_probs=18.7
Q ss_pred cCeeEcccCCCcccCchHHHHHHhhc
Q 047254 81 KKKVKCNYCGKVVSGGINRFKQHLAR 106 (836)
Q Consensus 81 ~~~~~C~yC~~~~~ggi~r~k~HL~~ 106 (836)
.+..+|.+|++.|.- -+.|+.|+..
T Consensus 10 ~k~~~C~~C~k~F~~-~~~L~~H~~~ 34 (46)
T 2emy_A 10 ENPYECHECGKAFSR-KYQLISHQRT 34 (46)
T ss_dssp SCCEECSSSCCEESS-HHHHHHHHHH
T ss_pred CcCcCCCCCCcccCc-HHHHHHHHHH
Confidence 356899999999963 5667777654
No 126
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.39 E-value=76 Score=21.83 Aligned_cols=26 Identities=35% Similarity=0.583 Sum_probs=19.3
Q ss_pred cCeeEcccCCCcccCchHHHHHHhhcc
Q 047254 81 KKKVKCNYCGKVVSGGINRFKQHLARI 107 (836)
Q Consensus 81 ~~~~~C~yC~~~~~ggi~r~k~HL~~~ 107 (836)
.+..+|.+|++.|.- -+.|+.|+..-
T Consensus 10 ~~~~~C~~C~k~f~~-~~~L~~H~~~H 35 (46)
T 2ytk_A 10 EKPYKCNECGKVFTQ-NSHLTNHWRIH 35 (46)
T ss_dssp SCSEECSSSCCEESS-HHHHHHHHHHH
T ss_pred CCCEeCCcCCCccCC-HHHHHHHHHHH
Confidence 356899999999963 56777786543
No 127
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.35 E-value=39 Score=23.16 Aligned_cols=24 Identities=33% Similarity=0.616 Sum_probs=18.1
Q ss_pred CeeEcccCCCcccCchHHHHHHhhc
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLAR 106 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~ 106 (836)
+..+|.+|++.|.- ...|+.|+..
T Consensus 11 ~~~~C~~C~k~F~~-~~~L~~H~~~ 34 (44)
T 2eox_A 11 KSYNCNECGKAFTR-IFHLTRHQKI 34 (44)
T ss_dssp CCEEETTTTEEESS-SHHHHTTHHH
T ss_pred CCeECcccCcccCC-HHHHHHHHHH
Confidence 46899999999953 5567777653
No 128
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.31 E-value=97 Score=21.22 Aligned_cols=27 Identities=30% Similarity=0.545 Sum_probs=20.6
Q ss_pred CeeEcccCCCcccCchHHHHHHhhccCC
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLARIQG 109 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~~~~ 109 (836)
+..+|..|++.|. .-..|+.|+..-.|
T Consensus 11 ~~~~C~~C~k~f~-~~~~L~~H~~~H~~ 37 (46)
T 2en1_A 11 KPFKCEECGKRFT-QNSQLHSHQRVHTG 37 (46)
T ss_dssp CSEEETTTTEEES-SHHHHHHHGGGGSC
T ss_pred CCeeCCCCCcccC-CHHHHHHHHHHcCC
Confidence 5689999999996 36778889764433
No 129
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=20.13 E-value=90 Score=20.78 Aligned_cols=24 Identities=21% Similarity=0.402 Sum_probs=18.8
Q ss_pred CeeEcccCCCcccCchHHHHHHhhc
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLAR 106 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~ 106 (836)
+..+|.+|++.|.- -+.|+.|+..
T Consensus 10 ~~~~C~~C~k~f~~-~~~l~~H~~~ 33 (42)
T 2epc_A 10 TPYLCGQCGKSFTQ-RGSLAVHQRS 33 (42)
T ss_dssp CCEECSSSCCEESS-HHHHHHHHHH
T ss_pred CCeECCCCCcccCC-HHHHHHHhhh
Confidence 56899999999963 5678888753
No 130
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.01 E-value=1e+02 Score=21.04 Aligned_cols=27 Identities=30% Similarity=0.443 Sum_probs=20.2
Q ss_pred CeeEcccCCCcccCchHHHHHHhhccCC
Q 047254 82 KKVKCNYCGKVVSGGINRFKQHLARIQG 109 (836)
Q Consensus 82 ~~~~C~yC~~~~~ggi~r~k~HL~~~~~ 109 (836)
+..+|..|++.|.- .+.|+.|+..-.+
T Consensus 11 k~~~C~~C~k~f~~-~~~L~~H~~~H~~ 37 (46)
T 2enc_A 11 KPFKCEECGKGFYT-NSQCYSHQRSHSG 37 (46)
T ss_dssp CSEECSSSCCEESS-HHHHHHHHHHSCC
T ss_pred CCcCCCCCCCcCCC-hHHHHHHHHHhCC
Confidence 56899999999963 5678888764433
Done!