BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047256
(383 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q67BJ4|A4GAT_MOUSE Lactosylceramide 4-alpha-galactosyltransferase OS=Mus musculus
GN=A4galt PE=2 SV=1
Length = 359
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 139/267 (52%), Gaps = 31/267 (11%)
Query: 120 VLGLESFFKAHPNGCLMILSRTL--DTPSGYRVLKPLLDGKFKVAAVTP-DLSFLFRNTP 176
+ +ES +AHP +++L + L DT + R L L F + P DL LF +TP
Sbjct: 101 MCSVESAARAHPESQVVVLMKGLPRDTTAQPRNLGISLLSCFPNVWIRPLDLQELFEDTP 160
Query: 177 AGAWFDEMKSGNKDPGEIPLAQNLSNLIRLAVLYKYGGVYLDTDFILLKSFEGLRNSIAA 236
AW+ E + +P ++P+ LS+ R+A+L+K+GG+YLDTDFI+LK+ L N++
Sbjct: 161 LAAWYSEARH-RWEPYQLPV---LSDASRIALLWKFGGIYLDTDFIVLKNLLNLTNTLGI 216
Query: 237 QSIDVVSGNWTRLNNAVLIFDMNHPLLFKFIEEFAATFDGNKWGHNGPYLVSRVVQR--- 293
QS V LN A L F+ H L + +F A ++G WGH GP L++RV ++
Sbjct: 217 QSRYV-------LNGAFLAFERKHEFLALCLHDFVANYNGWIWGHQGPQLLTRVFKKWCS 269
Query: 294 ----VQTRPGYNFTILPPTAFYPVNWNRIGGLFKVPQNQADSRWVNAKLLQLSREAYGVH 349
++ T LPP AFYP+ W F+ + +L QL Y VH
Sbjct: 270 IQSLEKSHACRGVTALPPEAFYPIPWQNWKKYFEDISPE--------ELTQLLNATYAVH 321
Query: 350 LWNKQSNSIAIEEGS--VMGRMISQHC 374
+WNK+S +E S ++ ++ +++C
Sbjct: 322 VWNKKSQGTHLEATSKALLAQLHARYC 348
>sp|Q9JI93|A4GAT_RAT Lactosylceramide 4-alpha-galactosyltransferase OS=Rattus norvegicus
GN=A4galt PE=1 SV=1
Length = 360
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 138/267 (51%), Gaps = 31/267 (11%)
Query: 120 VLGLESFFKAHPNGCLMILSRTL--DTPSGYRVLKPLLDGKFKVAAVTP-DLSFLFRNTP 176
+ +ES +AHP +++L + L DT + R L L F + P DL LF +TP
Sbjct: 102 MCSVESAARAHPESQVVVLMKGLPRDTTAWPRNLGISLLSCFPNVQIRPLDLQELFEDTP 161
Query: 177 AGAWFDEMKSGNKDPGEIPLAQNLSNLIRLAVLYKYGGVYLDTDFILLKSFEGLRNSIAA 236
AW+ E + +P +P+ LS+ R+A+L+K+GG+YLDTDFI+LK+ L N +
Sbjct: 162 LAAWYLEAQH-RWEPYLLPV---LSDASRIALLWKFGGIYLDTDFIVLKNLRNLTNMLGI 217
Query: 237 QSIDVVSGNWTRLNNAVLIFDMNHPLLFKFIEEFAATFDGNKWGHNGPYLVSRVVQR--- 293
QS V LN A L F+ H L I +F A ++G WGH GP L++RV ++
Sbjct: 218 QSRYV-------LNGAFLAFERKHEFLALCIRDFVAHYNGWIWGHQGPQLLTRVFKKWCS 270
Query: 294 ----VQTRPGYNFTILPPTAFYPVNWNRIGGLFKVPQNQADSRWVNAKLLQLSREAYGVH 349
++R T LPP AFYP+ W F+ + +L QL Y VH
Sbjct: 271 IHSLKESRACRGVTALPPEAFYPIPWQNWKKYFEDVSPE--------ELAQLLNATYAVH 322
Query: 350 LWNKQSNSIAIEEGS--VMGRMISQHC 374
+WNK+S +E S ++ ++ +++C
Sbjct: 323 VWNKKSQGTHLEATSRALLAQLHARYC 349
>sp|P0C8Q4|Y4990_ARATH Uncharacterized protein At4g19900 OS=Arabidopsis thaliana
GN=At4g19900 PE=2 SV=1
Length = 644
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 132/275 (48%), Gaps = 23/275 (8%)
Query: 115 FHGREVLGLESFFKAHPNGCLMILSRTLDTPSGYRVLKPLLDGKFKVAAVTPDLSFLFRN 174
F R GLES H + C+++ S T++ +R + +KVA P+L L ++
Sbjct: 383 FSVRHQRGLESLLSQHRDACVVVFSETVEL-DFFR--NSFVKDSYKVAVAMPNLDELLQD 439
Query: 175 TP----AGAWFDEMKSGNKDPGEIPLAQNLSNLIRLAVLYKYGGVYLDTDFILLKSFEGL 230
TP A WFD K+ + S L+RLA LYKYGGVYLD+D I+L S L
Sbjct: 440 TPTHVFASVWFDWRKTKF-------YPTHYSELVRLAALYKYGGVYLDSDVIVLGSLSSL 492
Query: 231 RNSIAAQSIDVVSGNWTRLNNAVLIFDMNHPLLFKFIEEFAATFDGNKWGHNGPYLVSRV 290
RN+I + D V+G LN AV+ F+ P L + + E+ T+D NG L++RV
Sbjct: 493 RNTIGME--DQVAGE--SLNGAVMSFEKKSPFLLECLNEYYLTYDDKCLRCNGADLLTRV 548
Query: 291 VQRV-----QTRPGYNFTILPPTAFYPVNWNRIGGLFKVPQNQADSRWVNAKLLQLSREA 345
+R + I P + F+P+N +I F P + + + ++ E+
Sbjct: 549 AKRFLNGKNRRMNQQELNIRPSSVFFPINSQQITNYFAYPAIEDERSQQDESFKKILNES 608
Query: 346 YGVHLWNKQSNSIAIEEGSVMGRMISQHCVICDQI 380
H WN ++S+ E S++ + + C+ C +
Sbjct: 609 LTFHFWNSVTSSLIPEPESLVAKFLDHSCIRCSDV 643
>sp|Q9NPC4|A4GAT_HUMAN Lactosylceramide 4-alpha-galactosyltransferase OS=Homo sapiens
GN=A4GALT PE=2 SV=1
Length = 353
Score = 121 bits (304), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 134/269 (49%), Gaps = 35/269 (13%)
Query: 120 VLGLESFFKAHPNGCLMILSRTLDTPSGYRVLK-----PLLDGKFKVAAVTPDLSFLFRN 174
+ +ES + HP +++L + L P G L LL V + DL LFR+
Sbjct: 95 MCSVESAARTHPESHVLVLMKGL--PGGNASLPRHLGISLLSCFPNVQMLPLDLRELFRD 152
Query: 175 TPAGAWFDEMKSGNKDPGEIPLAQNLSNLIRLAVLYKYGGVYLDTDFILLKSFEGLRNSI 234
TP W+ ++ G +P +P+ LS+ R+A+++K+GG+YLDTDFI+LK+ L N +
Sbjct: 153 TPLADWYAAVQ-GRWEPYLLPV---LSDASRIALMWKFGGIYLDTDFIVLKNLRNLTNVL 208
Query: 235 AAQSIDVVSGNWTRLNNAVLIFDMNHPLLFKFIEEFAATFDGNKWGHNGPYLVSRVVQR- 293
QS V LN A L F+ H + + +F ++G WGH GP L++RV ++
Sbjct: 209 GTQSRYV-------LNGAFLAFERRHEFMALCMRDFVDHYNGWIWGHQGPQLLTRVFKKW 261
Query: 294 ------VQTRPGYNFTILPPTAFYPVNWNRIGGLFKVPQNQADSRWVNAKLLQLSREAYG 347
++R T LPP AFYP+ W F+ + R ++A Y
Sbjct: 262 CSIRSLAESRACRGVTTLPPEAFYPIPWQDWKKYFEDINPEELPRLLSA--------TYA 313
Query: 348 VHLWNKQSNSIAIEEGS--VMGRMISQHC 374
VH+WNK+S E S ++ ++ +++C
Sbjct: 314 VHVWNKKSQGTRFEATSRALLAQLHARYC 342
>sp|Q9N289|A4GAT_PONPY Lactosylceramide 4-alpha-galactosyltransferase (Fragment) OS=Pongo
pygmaeus GN=A4GALT PE=3 SV=1
Length = 218
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 113/217 (52%), Gaps = 28/217 (12%)
Query: 167 DLSFLFRNTPAGAWFDEMKSGNKDPGEIPLAQNLSNLIRLAVLYKYGGVYLDTDFILLKS 226
DL LFR+TP W+ ++ G +P +P+ LS+ R+A+++K+GG+YLDTDFI+LK+
Sbjct: 10 DLRELFRDTPLADWYTAVQ-GRWEPYLLPV---LSDASRIALMWKFGGIYLDTDFIVLKN 65
Query: 227 FEGLRNSIAAQSIDVVSGNWTRLNNAVLIFDMNHPLLFKFIEEFAATFDGNKWGHNGPYL 286
L N + QS V LN A L F H + + +F ++G WGH GP L
Sbjct: 66 LRNLTNVLGTQSRYV-------LNGAFLAFQRRHEFMALCMRDFVDHYNGWIWGHQGPQL 118
Query: 287 VSRVVQR-------VQTRPGYNFTILPPTAFYPVNWNRIGGLFKVPQNQADSRWVNAKLL 339
++RV ++ ++R T LPP AFYP+ W F+ + R +NA
Sbjct: 119 LTRVFKKWCSIRSLAESRACRGVTTLPPEAFYPIPWQDWKKYFEDISPEELPRLLNA--- 175
Query: 340 QLSREAYGVHLWNKQSNSIAIEEGS--VMGRMISQHC 374
Y VH+WNK+S E S ++ ++ +++C
Sbjct: 176 -----TYAVHVWNKKSQGTRFEATSRALLAQLHARYC 207
>sp|Q9N291|A4GAT_PANTR Lactosylceramide 4-alpha-galactosyltransferase OS=Pan troglodytes
GN=A4GALT PE=3 SV=1
Length = 353
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 134/269 (49%), Gaps = 35/269 (13%)
Query: 120 VLGLESFFKAHPNGCLMILSRTLDTPSGYRVLK-----PLLDGKFKVAAVTPDLSFLFRN 174
+ +ES + HP +++L + L P G L LL V + DL LF++
Sbjct: 95 MCSVESAARTHPESHVLVLMKGL--PGGNASLPRHLGISLLSCFPNVQMLPLDLRELFQD 152
Query: 175 TPAGAWFDEMKSGNKDPGEIPLAQNLSNLIRLAVLYKYGGVYLDTDFILLKSFEGLRNSI 234
TP W+ ++ G +P +P+ LS+ R+A+++K+GG+YLDTDFI+LK+ L N +
Sbjct: 153 TPLADWYAAVQ-GRWEPYLLPV---LSDASRIALMWKFGGIYLDTDFIVLKNLRNLTNVL 208
Query: 235 AAQSIDVVSGNWTRLNNAVLIFDMNHPLLFKFIEEFAATFDGNKWGHNGPYLVSRVVQR- 293
QS V LN A L F+ H + + +F ++G WGH GP L++RV ++
Sbjct: 209 GTQSRYV-------LNGAFLAFERRHEFMALCMRDFVDHYNGWIWGHQGPQLLTRVFKKW 261
Query: 294 ------VQTRPGYNFTILPPTAFYPVNWNRIGGLFKVPQNQADSRWVNAKLLQLSREAYG 347
++R T LPP AFYP+ W F+ + R ++A Y
Sbjct: 262 CSIRSLAESRSCRGVTTLPPEAFYPIPWQDWKKYFEDINPEELPRLLSA--------TYA 313
Query: 348 VHLWNKQSNSIAIEEGS--VMGRMISQHC 374
VH+WNK+S E S ++ ++ +++C
Sbjct: 314 VHVWNKKSQGTRFEATSRALLAQLHARYC 342
>sp|Q9N290|A4GAT_GORGO Lactosylceramide 4-alpha-galactosyltransferase (Fragment)
OS=Gorilla gorilla gorilla GN=A4GALT PE=3 SV=1
Length = 327
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 134/269 (49%), Gaps = 35/269 (13%)
Query: 120 VLGLESFFKAHPNGCLMILSRTLDTPSGYRVLK-----PLLDGKFKVAAVTPDLSFLFRN 174
+ +ES + HP +++L + L P G L LL V + DL LFR+
Sbjct: 69 MCSVESAARTHPESHVLVLMKGL--PGGNASLPRHLGISLLSCFPNVQMLPLDLRELFRD 126
Query: 175 TPAGAWFDEMKSGNKDPGEIPLAQNLSNLIRLAVLYKYGGVYLDTDFILLKSFEGLRNSI 234
TP W+ ++ G +P +P+ LS+ R+A+++K+GG+YLDTDFI+LK+ L N +
Sbjct: 127 TPLADWYAAVQ-GRWEPYLLPV---LSDASRIALMWKFGGIYLDTDFIVLKNLRNLTNVL 182
Query: 235 AAQSIDVVSGNWTRLNNAVLIFDMNHPLLFKFIEEFAATFDGNKWGHNGPYLVSRVVQR- 293
QS V LN A L F+ H + + +F ++G WGH GP L++RV ++
Sbjct: 183 GTQSRYV-------LNGAFLAFERXHEFMALCMXDFVDHYNGWIWGHQGPQLLTRVFKKW 235
Query: 294 ------VQTRPGYNFTILPPTAFYPVNWNRIGGLFKVPQNQADSRWVNAKLLQLSREAYG 347
++R T LPP AFYP+ W F+ + +L +L Y
Sbjct: 236 CSIRSLAESRACRGVTTLPPEAFYPIPWQDWKKYFEDINPE--------ELPRLFSATYA 287
Query: 348 VHLWNKQSNSIAIEEGS--VMGRMISQHC 374
VH+WNK+S E S ++ ++ +++C
Sbjct: 288 VHVWNKKSQGTRFEATSRALLAQLHARYC 316
>sp|Q9UNA3|A4GCT_HUMAN Alpha-1,4-N-acetylglucosaminyltransferase OS=Homo sapiens GN=A4GNT
PE=2 SV=1
Length = 340
Score = 79.3 bits (194), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 102/220 (46%), Gaps = 35/220 (15%)
Query: 167 DLSFLFRNTPAGAWFDEMKSGNKDPGEIPLAQNLSNLIRLAVLYKYGGVYLDTDFILLKS 226
D+ L +TP +W++++ + E S+ RLA+++KYGG+Y+DTD I ++
Sbjct: 120 DMKRLLEDTPLFSWYNQINAS----AERNWLHISSDASRLAIIWKYGGIYMDTDVISIRP 175
Query: 227 FEGLRNSIAAQSIDVVSGNWTRLNNAVLIFDMNHPLLFKFIEEFAATFDGNKWGHNGPYL 286
N +AAQ+ S N + F +HP L++ +E F ++ WG+ GP L
Sbjct: 176 IPE-ENFLAAQASRYSS-------NGIFGFLPHHPFLWECMENFVEHYNSAIWGNQGPEL 227
Query: 287 VSRVV---------QRVQTRPGYNFTILPPTAFYPVNWNRIGGLFKVPQNQADSRWVNAK 337
++R++ Q V N + L P FYP+++ ++V W
Sbjct: 228 MTRMLRVWCKLEDFQEVSDLRCLNISFLHPQRFYPISYREWRRYYEV--------WDTEP 279
Query: 338 LLQLSREAYGVHLW---NKQSNSIAIEEGSVMGRMISQHC 374
+S Y +HLW N++ ++ +++ + +HC
Sbjct: 280 SFNVS---YALHLWNHMNQEGRAVIRGSNTLVENLYRKHC 316
>sp|Q10323|IMT3_SCHPO Inositol phosphoceramide mannosyltransferase 3
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC17G8.11c PE=1 SV=1
Length = 356
Score = 37.7 bits (86), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 195 PLAQNLSNLIRLAVLYKYGGVYLDTDFILLKSFEGLRNSIAAQSIDVVSGNWTRLNNAVL 254
P ++++R +LYKYGG+YLD D ++ + L + A SG ++N V+
Sbjct: 117 PYNIERADVVRYFILYKYGGIYLDLDVGCNRTLDPLLHYPAWVRRTSPSG----ISNNVM 172
Query: 255 IFDMNHPLLFKFI 267
F HP L + +
Sbjct: 173 GFAKGHPFLLQVV 185
>sp|Q0ATP0|FOLD_MARMM Bifunctional protein FolD OS=Maricaulis maris (strain MCS10)
GN=folD PE=3 SV=1
Length = 298
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Query: 101 PEFDILKSDNLTEQFHGREVLGLESFFKAHPNGCLMILSRTLDTPSGYRVL 151
P+ D+ D LTE GR VLG P GC+++ R L SG V+
Sbjct: 116 PDKDV---DGLTEVSAGRLVLGKPGLRPCTPAGCVLLAERALGDLSGKSVV 163
>sp|P86387|PLDA1_CARPA Phospholipase D alpha 1 OS=Carica papaya GN=PLD1 PE=1 SV=1
Length = 808
Score = 32.7 bits (73), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 26/61 (42%)
Query: 99 KLPEFDILKSDNLTEQFHGREVLGLESFFKAHPNGCLMILSRTLDTPSGYRVLKPLLDGK 158
KL FD+ K N G LG+ F + GC + L + P G+ PL GK
Sbjct: 144 KLQFFDVKKDSNWNMGIKGARYLGVPYTFYSQRRGCRVSLYQDAHVPDGFIPKIPLAGGK 203
Query: 159 F 159
+
Sbjct: 204 Y 204
>sp|Q8Q054|SYL_METMA Leucine--tRNA ligase OS=Methanosarcina mazei (strain ATCC BAA-159 /
DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=leuS PE=3
SV=2
Length = 966
Score = 32.3 bits (72), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Query: 86 NVTEDERTAWFRKKLPEFDILKSDNLTEQFHGREVLGLESFFKAHPNGCLMILSRTLDTP 145
+T +RT + + +P I+ LT G EV+ L + F NG +++S P
Sbjct: 264 KLTFTDRTVEYVEDMPAKSII-GIKLTNPVTGDEVISLPASFVKPENGSGIVMSVPAHAP 322
Query: 146 SGYRVLKPLLDGKFKVAAVTPDL 168
Y L+ L D +T DL
Sbjct: 323 FDYLALRDLYDADLSEYGITEDL 345
>sp|Q8TQD3|SYL_METAC Leucine--tRNA ligase OS=Methanosarcina acetivorans (strain ATCC
35395 / DSM 2834 / JCM 12185 / C2A) GN=leuS PE=3 SV=1
Length = 961
Score = 32.0 bits (71), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Query: 86 NVTEDERTAWFRKKLPEFDILKSDNLTEQFHGREVLGLESFFKAHPNGCLMILSRTLDTP 145
+T +RT + + +P I+ LT G EV+ L + F NG +++S P
Sbjct: 264 KLTFTDRTVEYVEDVPAKSII-GIKLTNPITGDEVISLPASFVKPENGSGIVMSVPAHAP 322
Query: 146 SGYRVLKPLLDGKFKVAAVTPDL 168
Y L+ L D +T DL
Sbjct: 323 FDYLALRDLYDADLSEYGITEDL 345
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 141,834,258
Number of Sequences: 539616
Number of extensions: 6030782
Number of successful extensions: 12716
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 12677
Number of HSP's gapped (non-prelim): 14
length of query: 383
length of database: 191,569,459
effective HSP length: 119
effective length of query: 264
effective length of database: 127,355,155
effective search space: 33621760920
effective search space used: 33621760920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)